Citrus Sinensis ID: 017423

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370--
Protein Sequence
MSEDEENPPVARTPNNSETLSTSCKTKLTWYDTLAHQASVYGVAAGYCISASLLSIINKWAIMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDYQFTVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQSTSNKPKAVKETKAQESEEEQRKLLEMQNNTETNNKEKEVVES
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHccHHHHHHHHHccccccccccccHHccc
Secondary Structure Prediction (SSPRO)
ccccccccccEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcccEEcccccHHHHHHHccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEcccccccccEEHHHHHHHHHHHHHHHHHHccHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHcccEEEEEEEEEccccccHHHHHHHHHHHHHHHHHHHEEEccccccccccccccHHHHccHEEccccccccccccEcccc
Coil and Loop (DISEMBL)
msedeenppvartpnnsetlstscktkltWYDTLAHQASVYGVAAGYCISASLLSIINKWAimkfpypgaLTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETlflhqpwpsikTWLSLATIFGGSVIYVLTDYQFTVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGgvmyqqstsnkpkaVKETKAQESEEEQRKLLEMQNNtetnnkekevves
Flexible Loop (DISEMBL)
msedeenppvartpnnsetlstSCKTKLTWYDTLAHQASVYGVAAGYCISASLLSIINKWAIMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDYQFTVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQSTSNKPKAVKETKAQESEEEQRKLlemqnntetnnkekevves
Low Complexity Region (SEG)
MSEDEENPPVARTPNNSETLSTSCKTKLTWYDTLAHQASVYGVAAGYCISASLLSIINKWAIMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDYQFTVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGlvlynnlealllfplellimgelKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQSTSNKPKAVKETKAQESEEEQRKLLEMQnntetnnkekevveS
Disordered region (IsUnstruct)
***********************CKTKLTWYDTLAHQASVYGVAAGYCISASLLSIINKWAIMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDYQFTVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMY*********************************************
Disordered Region (DISOPRED)
**************************************SVYGVAAGYCISASLLSIINKWAIMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDYQFTVMAYSWALAYLVSMTIDFVYIKHVV**IGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMY*********************************************
Disordered Region (DISEMBL)
**********************SCKTKLTWYDTLAHQASVYGVAAGYCISASLLSIINKWAIMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDYQFTVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQ***********************KLLEMQNNT************
Disordered Region (DISPRO)
***************************LTWYDTLAHQASVYGVAAGYCISASLLSIINKWAIMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDYQFTVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQSTSNKP*************************************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSEDEENPPVARTPNNSETLSTSCKTKLTWYDTLAHQASVYGVAAGYCISASLLSIINKWAIMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDYQFTVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQSTSNKPKAVxxxxxxxxxxxxxxxxxxxxxTETNNKEKEVVES
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	372	2.2.26 [Sep-21-2011]
Q9S845	372	GDP-mannose transporter G	yes	no	0.981	0.981	0.795	1e-165
Q84L08	341	GDP-mannose transporter G	no	no	0.841	0.917	0.512	1e-82
Q941R4	333	GDP-mannose transporter G	no	no	0.766	0.855	0.247	3e-09
Q9NTN3	355	UDP-glucuronic acid/UDP-N	yes	no	0.879	0.921	0.220	3e-09
Q15B89	343	UDP-N-acetylglucosamine/U	yes	no	0.879	0.953	0.223	4e-09
Q5RDC9	355	UDP-N-acetylglucosamine/U	yes	no	0.879	0.921	0.220	7e-09
A1DA52	357	GDP-mannose transporter 2	N/A	no	0.822	0.857	0.230	1e-08
A2VE55	355	UDP-N-acetylglucosamine/U	yes	no	0.879	0.921	0.217	2e-08
Q7SBC5	392	GDP-mannose transporter O	N/A	no	0.838	0.795	0.206	2e-07
Q84L09	375	GDP-mannose transporter G	no	no	0.741	0.736	0.218	2e-07

>sp|Q9S845|GONS3_ARATH GDP-mannose transporter GONST3 OS=Arabidopsis thaliana GN=GONST3 PE=2 SV=1

 Score =  581 bits (1497), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 296/372 (79%), Positives = 324/372 (87%), Gaps = 7/372 (1%)

Query: 2   SEDEENPPVARTPNNSETLSTSCKTKLTWYDTLAHQASVYGVAAGYCISASLLSIINKWA 61
           + DEEN  V    N  E       +  TWY     QASVYGVAAGYC+SASLLSIINKWA
Sbjct: 3   TNDEENGTVIEVKNVPE------PSPETWYSVFLRQASVYGVAAGYCLSASLLSIINKWA 56

Query: 62  IMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIFYLSLFTNSE 121
           IMKFPYPGALTA+QYFTSAAGVLLC   K +EHD+L LLT+WRFLPAA+IFYLSLFTNSE
Sbjct: 57  IMKFPYPGALTAMQYFTSAAGVLLCAQMKLIEHDSLNLLTMWRFLPAAMIFYLSLFTNSE 116

Query: 122 LLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDYQFT 181
           LLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPS+KTW SLATIFGGS++YV TDYQFT
Sbjct: 117 LLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSVKTWGSLATIFGGSLLYVFTDYQFT 176

Query: 182 VMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKI 241
           + AYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKI
Sbjct: 177 IAAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKI 236

Query: 242 KHEMTTASDWYSFEVVLPVGLSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVIN 301
           KHE+T  +DWYS +VVLPVGLSC+FGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVIN
Sbjct: 237 KHEITDETDWYSLQVVLPVGLSCLFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVIN 296

Query: 302 LVIWDKHSTWVGTVGLLICMLGGVMYQQSTSNKPKAVKETKAQESEEEQRKLLEMQNNTE 361
           L++WDKHST+VGT+GLL+CM GGVMYQQST  KP A +E K QE +EEQ KLLEMQ N E
Sbjct: 297 LMVWDKHSTFVGTLGLLVCMFGGVMYQQSTIKKPNATQEAKPQEQDEEQEKLLEMQENKE 356

Query: 362 TNNKE-KEVVES 372
           +N+ + KE ++S
Sbjct: 357 SNSVDIKETLKS 368

GDP-mannose transporter that may be involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.
Arabidopsis thaliana (taxid: 3702)

>sp|Q84L08|GONS4_ARATH GDP-mannose transporter GONST4 OS=Arabidopsis thaliana GN=GONST4 PE=2 SV=1

 Score =  306 bits (785), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 165/322 (51%), Positives = 213/322 (66%), Gaps = 9/322 (2%)

Query: 36  HQASVYGVAAGYCISASLLSIINKWAIMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHD 95
            Q +   +  GY + +SLL++INK AI  F YPG LTALQY T    V L G    + HD
Sbjct: 10  KQLTTSSLVIGYALCSSLLAVINKLAITYFNYPGLLTALQYLTCTVAVYLLGKSGLINHD 69

Query: 96  ALELLTVWRFLPAAIIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWP 155
                T  +FLPAAI+FYL++FTN+ LL HANVDTFIVFRS  P+ VAI +T+F  QP P
Sbjct: 70  PFTWDTAKKFLPAAIVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVAIADTVFRSQPLP 129

Query: 156 SIKTWLSLATIFGGSVIYVLTDYQFTVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWG 215
           S  T+LSL  I  G+V YV TD  FT+ AYSWALAYLV++T + VYIKH+V  I LN WG
Sbjct: 130 SRLTFLSLVVILAGAVGYVATDSSFTLTAYSWALAYLVTITTEMVYIKHMVSNIKLNIWG 189

Query: 216 LVLYNNLEALLLFPLELLIMGELKKIKHEMTTAS----DWYSFEVVLPVGLSCIFGLAIS 271
           LVLYNNL +L++ P+   + GE  ++   ++       + Y+F     V  SC+FG  IS
Sbjct: 190 LVLYNNLLSLMIAPVFWFLTGEFTEVFAALSENRGNLFEPYAFS---SVAASCVFGFLIS 246

Query: 272 FFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQST 331
           +FGF+ R AISAT FTV G+VNK LTVVIN++IWDKH+T VG V LL  + GGV YQQS 
Sbjct: 247 YFGFAARNAISATAFTVTGVVNKFLTVVINVLIWDKHATPVGLVCLLFTICGGVGYQQSV 306

Query: 332 S-NKP-KAVKETKAQESEEEQR 351
             +KP + V E  +++ EE++ 
Sbjct: 307 KLDKPIEKVSEKDSEKGEEDEE 328

GDP-mannose transporter that may be involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.

Arabidopsis thaliana (taxid: 3702)

>sp|Q941R4|GONS1_ARATH GDP-mannose transporter GONST1 OS=Arabidopsis thaliana GN=GONST1 PE=1 SV=2

 Score = 63.2 bits (152), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 142/307 (46%), Gaps = 22/307 (7%)

Query: 36  HQASVYGVAAGYCISASLLSIINKWAIMKFPYPGALTALQY--FTSA---AGVLLCGYFK 90
           ++A + G+A  YCIS+  + ++NK+ +  + +   +  + Y  F S     G+ L G   
Sbjct: 31  NRALLSGLA--YCISSCSMILVNKFVLSSYNFNAGIFLMLYQNFVSVIIVVGLSLMGLIT 88

Query: 91  FLEHDALELLTVWRFLPAAIIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFL 150
             E   L L+ VW   P  +IF   L T+   L + NV    V ++   +  A+GE ++L
Sbjct: 89  -TEPLTLRLMKVW--FPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGE-MYL 144

Query: 151 HQPWPSIKTWLSLATIFGGSVIYVLTDYQFTVMAYSWALA-------YLVSMTIDFVYIK 203
                  + W +L  +   +V   +TD  F  + Y+W +A       Y +++       K
Sbjct: 145 FNKQHDNRVWAALFLMIISAVSGGITDLSFNAVGYAWQIANCFLTASYSLTLRKTMDTAK 204

Query: 204 HVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLS 263
            V  +  LN + +VL NN  +L L  L      E+  +    T      SF +V+   LS
Sbjct: 205 QVTQSGNLNEFSMVLLNNTLSLPLGLLLSYFFNEMDYLYQ--TPLLRLPSFWMVMT--LS 260

Query: 264 CIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLG 323
            + GLAISF          AT ++++G +NK+   +  +V+++  ++   +  +L  ++ 
Sbjct: 261 GLLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSIAGIVLFNVPTSLQNSASILFGLVA 320

Query: 324 GVMYQQS 330
           GV++ ++
Sbjct: 321 GVVFARA 327

Involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen. Required for the luminal synthesis of a variety of plant cell surface components.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9NTN3|S35D1_HUMAN UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter OS=Homo sapiens GN=SLC35D1 PE=1 SV=1

 Score = 63.2 bits (152), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 79/358 (22%), Positives = 149/358 (41%), Gaps = 31/358 (8%)

Query: 6   ENPPVARTPNNSETLSTSCKTKLTWYDTLAHQASVYGVAAG-YCISASLLSIINKWAIMK 64
           E P  + T  + E L  +    LT +  L        +AAG Y +S+ L+ ++NK  +  
Sbjct: 15  EAPAKSSTLRDEEELGMASAETLTVFLKL--------LAAGFYGVSSFLIVVVNKSVLTN 66

Query: 65  FPYPGAL-TALQYFTSAAGVLLCGY-FKFLEHDALELLTVWRFLPAAIIFY----LSLFT 118
           + +P +L   L    +   VL  G   + ++   L+     +  P  ++++      LF+
Sbjct: 67  YRFPSSLCVGLGQMVATVAVLWVGKALRVVKFPDLDRNVPRKTFPLPLLYFGNQITGLFS 126

Query: 119 NSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFG---GSVIYVL 175
             +L    N+  F V R    +F    E + L + +    +W    T+F    G+ +   
Sbjct: 127 TKKL----NLPMFTVLRRFSILFTMFAEGVLLKKTF----SWGIKMTVFAMIIGAFVAAS 178

Query: 176 TDYQFTVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIM 235
           +D  F +  Y++ L   V    +  Y+K  + +  L  +GL+ YN L   ++ P   L +
Sbjct: 179 SDLAFDLEGYAFILINDVLTAANGAYVKQKLDSKELGKYGLLYYNAL--FMILPT--LAI 234

Query: 236 GELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFFGFSCRRAISATGFTVLGIVNKL 295
                   +      W     +L   LSC+ G  + +    C +  SA   T++G +  +
Sbjct: 235 AYFTGDAQKAVEFEGWADTLFLLQFTLSCVMGFILMYATVLCTQYNSALTTTIVGCIKNI 294

Query: 296 LTVVINLVIW-DKHSTWVGTVGLLICMLGGVMYQQSTSNKPKAVKETKAQESEEEQRK 352
           L   I +V   D   TW   +GL I + G ++Y   T  + +  K+++A    + + K
Sbjct: 295 LITYIGMVFGGDYIFTWTNFIGLNISIAGSLVYSYITFTEEQLSKQSEANNKLDIKGK 352

Transports both UDP-glucuronic acid (UDP-GlcA) and UDP-N-acetylgalactosamine (UDP-GalNAc) from the cytoplasm to into the endoplasmic reticulum lumen. May participate in glucuronidation and/or chondroitin sulfate biosynthesis.

Homo sapiens (taxid: 9606)

>sp|Q15B89|S35D2_PIG UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter (Fragment) OS=Sus scrofa GN=SLC35D2 PE=2 SV=1

 Score = 62.8 bits (151), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 80/358 (22%), Positives = 149/358 (41%), Gaps = 31/358 (8%)

Query: 6   ENPPVARTPNNSETLSTSCKTKLTWYDTLAHQASVYGVAAG-YCISASLLSIINKWAIMK 64
           E P  + T  + E L  +    LT +  L        +AAG Y +S+ L+ ++NK  +  
Sbjct: 3   EAPAKSSTHRHDEELGMASAETLTVFLKL--------LAAGFYGVSSFLIVVVNKSVLTN 54

Query: 65  FPYPGAL-TALQYFTSAAGVLLCGY-FKFLEHDALELLTVWRFLPAAIIFY----LSLFT 118
           + +P +L   L    +   VL  G   + ++    +     +  P  ++++      LF+
Sbjct: 55  YRFPSSLCVGLGQMVATVAVLWVGKALRVVKFPDFDRNVPRKTFPLPLLYFGNQITGLFS 114

Query: 119 NSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFG---GSVIYVL 175
             +L    N+  F V R    +F    E + L + +    +W    T+F    G+ +   
Sbjct: 115 TKKL----NLPMFTVLRRFSILFTMFAEGVLLKKTF----SWGIKMTVFAMIIGAFVAAS 166

Query: 176 TDYQFTVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIM 235
           +D  F +  Y + L   V    +  Y+K  + +  L  +GL+ YN L  +L       I 
Sbjct: 167 SDLAFDLEGYVFILINDVLTAANGAYVKQKLDSKELGKYGLLYYNALFMILPTLAIAYIT 226

Query: 236 GELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFFGFSCRRAISATGFTVLGIVNKL 295
           G+ +K          W     +L   LSC+ G  + +    C +  SA   T++G +  +
Sbjct: 227 GDAQKAMD----FEGWADTLFLLQFTLSCVMGFILMYATVLCTQYNSALTTTIVGCIKNI 282

Query: 296 LTVVINLVIW-DKHSTWVGTVGLLICMLGGVMYQQSTSNKPKAVKETKAQESEEEQRK 352
           L   I +V   D   TW   +GL I + G ++Y   T ++ +  K+++A    + + K
Sbjct: 283 LITYIGMVFGGDYIFTWTNFIGLNISIAGSLVYSYITFSEEQLSKQSEASNKLDNKGK 340

Antiporter transporting nucleotide sugars such as UDP-N-acetylglucosamine (UDP-GlcNAc), UDP-glucose (UDP-Glc) and GDP-mannose (GDP-Man) pooled in the cytosol into the lumen of the Golgi in exchange for the corresponding nucleosides monophosphates (UMP for UDP-sugars and GMP for GDP-sugars). May take part in heparan sulfate synthesis by supplying UDP-Glc-NAc, the donor substrate, and thus be involved in growth factor signaling.

Sus scrofa (taxid: 9823)

>sp|Q5RDC9|S35D2_PONAB UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter OS=Pongo abelii GN=SLC35D2 PE=2 SV=1

 Score = 62.0 bits (149), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 79/358 (22%), Positives = 148/358 (41%), Gaps = 31/358 (8%)

Query: 6   ENPPVARTPNNSETLSTSCKTKLTWYDTLAHQASVYGVAAG-YCISASLLSIINKWAIMK 64
           E P  + T  + E L  +    LT +  L        +AAG Y +S+ L+ ++NK  +  
Sbjct: 15  EAPAKSSTLRDEEELGMASAETLTVFLKL--------LAAGFYGVSSFLIVVVNKSVLTN 66

Query: 65  FPYPGAL-TALQYFTSAAGVLLCGY-FKFLEHDALELLTVWRFLPAAIIFY----LSLFT 118
           + +P +L   L    +   VL  G   + ++   L+     +  P  ++++      LF+
Sbjct: 67  YRFPSSLCVGLGQMVATVAVLWVGKALRVVKFPDLDRNVPRKTFPLPLLYFGNQITGLFS 126

Query: 119 NSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFG---GSVIYVL 175
             +L    N+  F V R    +F    E + L + +    +W    T+F    G+ +   
Sbjct: 127 TKKL----NLPMFTVLRRFSILFTMFAEGVLLKKTF----SWGIKMTVFAMIIGAFVAAS 178

Query: 176 TDYQFTVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIM 235
           +D  F +  Y + L   V    +  Y+K  + +  L  +GL+ YN L   ++ P   L +
Sbjct: 179 SDLAFDLEGYVFILINDVLTAANGAYVKQKLDSKELGKYGLLYYNAL--FMILPT--LAI 234

Query: 236 GELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFFGFSCRRAISATGFTVLGIVNKL 295
                   +      W     +L   LSC+ G  + +    C +  SA   T++G +  +
Sbjct: 235 AYFTGDAQKAVEFEGWADTLFLLQFTLSCVMGFILMYATVLCTQYNSALTTTIVGCIKNI 294

Query: 296 LTVVINLVIW-DKHSTWVGTVGLLICMLGGVMYQQSTSNKPKAVKETKAQESEEEQRK 352
           L   I +V   D   TW   +GL I + G ++Y   T  + +  K+++A    + + K
Sbjct: 295 LITYIGMVFGGDYIFTWTNFIGLNISIAGSLVYSYITFTEEQLSKQSEANNKLDIKGK 352

Antiporter transporting nucleotide sugars such as UDP-N-acetylglucosamine (UDP-GlcNAc), UDP-glucose (UDP-Glc) and GDP-mannose (GDP-Man) pooled in the cytosol into the lumen of the Golgi in exchange for the corresponding nucleosides monophosphates (UMP for UDP-sugars and GMP for GDP-sugars). May take part in heparan sulfate synthesis by supplying UDP-Glc-NAc, the donor substrate, and thus be involved in growth factor signaling.

Pongo abelii (taxid: 9601)

>sp|A1DA52|GMT2_NEOFI GDP-mannose transporter 2 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=gmt2 PE=3 SV=1

 Score = 61.2 bits (147), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 86/373 (23%), Positives = 160/373 (42%), Gaps = 67/373 (17%)

Query: 1   MSEDEENPPVARTPNNSETLSTSCKTKLTWYDTLAHQASVYGVAAGYCISASLLSIINKW 60
           +S+DE  P   R       +S S K+   +  T+ + AS   +A  YC+S+  ++++NK+
Sbjct: 8   VSKDELLPVYERRSQRDGDISGSVKS---FASTIGNSASAAVLA--YCLSSISMTLVNKY 62

Query: 61  AI------MKFPYPGALTALQYFTSAAGVLLCGYFKFLEHDAL-ELLTVWRFLPAAIIFY 113
            +      + F Y     A+Q F     +L C     +++ AL +L     +LP +++  
Sbjct: 63  VVSGASWNLSFLY----LAMQSFIGTVAILACKKTGLIQNLALFDLKKAQTWLPISLLLV 118

Query: 114 LSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIY 173
             ++T ++ L   +V  + +F++   I +A GE L +      +   LS   +   SV+ 
Sbjct: 119 GMIYTGNKALQFLSVPVYTIFKNLTIIVIAYGEVLMVGGGVKPLAL-LSFGLMVLSSVVA 177

Query: 174 VLTDYQ----FTVMAYSWALAYLVS--------MTIDFVY-------IKHVVMTIGLNTW 214
              D Q     TV A S + A  +S        M  + ++       ++ V+     + W
Sbjct: 178 AWADIQNATTATVGASSDSTAAALSALNAGYAWMGTNVIFSASYALGMRRVIKKTNFDNW 237

Query: 215 GLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYS---------------FEVVLP 259
            ++ YNNL   L  P+ LL              A DW S               F  +L 
Sbjct: 238 DVMFYNNL---LSIPILLL----------ASVLAEDWSSENLQRNFPAELRQSLFIGILY 284

Query: 260 VGLSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLI 319
            G++ +F   IS+    C RA S+T + ++G +NKL   V  +V +    T+     +++
Sbjct: 285 SGVAAVF---ISYCTAWCVRATSSTTYAMVGALNKLPLAVAGIVFFAAPVTFGSVSAIVL 341

Query: 320 CMLGGVMYQQSTS 332
             + G++Y ++ S
Sbjct: 342 GFISGLVYARAKS 354

Involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.

Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) (taxid: 331117)

>sp|A2VE55|S35D2_BOVIN UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter OS=Bos taurus GN=SLC35D2 PE=2 SV=1

 Score = 60.1 bits (144), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 78/358 (21%), Positives = 148/358 (41%), Gaps = 31/358 (8%)

Query: 6   ENPPVARTPNNSETLSTSCKTKLTWYDTLAHQASVYGVAAG-YCISASLLSIINKWAIMK 64
           E P  + T  + E L  +    LT +  L        +AAG Y +S+ L+ ++NK  +  
Sbjct: 15  EAPAKSSTHRHEEELGMASAETLTVFLKL--------LAAGFYGVSSFLIVVVNKSVLTN 66

Query: 65  FPYPGAL-TALQYFTSAAGVLLCGY-FKFLEHDALELLTVWRFLPAAIIFY----LSLFT 118
           + +P +L   L    +   VL  G   + ++    +     +  P  ++++      LF+
Sbjct: 67  YRFPSSLCVGLGQMVATVAVLWVGKALRVVKFPDFDRNVPRKTFPLPLLYFGNQITGLFS 126

Query: 119 NSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFG---GSVIYVL 175
             +L    N+  F V R    +F    E + L + +    +W    T+F    G+ +   
Sbjct: 127 TKKL----NLPMFTVLRRFSILFTMFAEGVLLKKTF----SWGIKMTVFAMIIGAFVAAS 178

Query: 176 TDYQFTVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIM 235
           +D  F +  Y + L   V    +  Y+K  + +  L  +GL+ YN L   ++ P   L +
Sbjct: 179 SDLAFDLEGYVFILINDVLTAANGAYVKQKLDSKELGKYGLLYYNAL--FMILPT--LAI 234

Query: 236 GELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFFGFSCRRAISATGFTVLGIVNKL 295
                   +      W     +L   LSC+ G  + +    C +  SA   T++G +  +
Sbjct: 235 AYFTGDAQKALDFEGWADTLFLLQFTLSCVMGFILMYATVLCTQYNSALTTTIVGCIKNI 294

Query: 296 LTVVINLVIW-DKHSTWVGTVGLLICMLGGVMYQQSTSNKPKAVKETKAQESEEEQRK 352
           L   I +V   D   TW   +GL I + G ++Y   T ++ +  K+++A    + + K
Sbjct: 295 LITYIGMVFGGDYIFTWTNFIGLNISIAGSLVYSYITFSEEQLSKQSEASSKLDIKGK 352

Antiporter transporting nucleotide sugars such as UDP-N-acetylglucosamine (UDP-GlcNAc), UDP-glucose (UDP-Glc) and GDP-mannose (GDP-Man) pooled in the cytosol into the lumen of the Golgi in exchange for the corresponding nucleosides monophosphates (UMP for UDP-sugars and GMP for GDP-sugars). May take part in heparan sulfate synthesis by supplying UDP-GlcNAc, the donor substrate, and thus be involved in growth factor signaling.

Bos taurus (taxid: 9913)

>sp|Q7SBC5|GMT_NEUCR GDP-mannose transporter OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=vrg-4 PE=3 SV=1

 Score = 57.0 bits (136), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 75/364 (20%), Positives = 150/364 (41%), Gaps = 52/364 (14%)

Query: 5   EENPPVARTPNNSETLSTSCKTKLTWYDTLAHQASVYGVAAGYCISASLLSIINKWAI-- 62
           +++P +AR  ++             ++D + H      +A  YC+S+  ++++NK+ +  
Sbjct: 21  DKDPFLARRSSSQPNRPQQAGPFGGYFDKIDHSPGASIIA--YCLSSISMTVVNKYVVSG 78

Query: 63  ----MKFPYPGALTALQYFTSAAGVLLCGYFKFLEH-DALELLTVWRFLPAAIIFYLSLF 117
               + F Y     A+Q     A +L+C      ++  A +     ++ P +++    ++
Sbjct: 79  SEWNLNFFY----LAVQSLVCTAAILICKQLGMFQNLAAFDSTKAKKWFPISLLLVGMIY 134

Query: 118 TNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTD 177
           T+++ L   +V  + +F++   I VA GE L+       +   LS   +   SVI    D
Sbjct: 135 TSTKALQFLSVPVYTIFKNLTIIVVAYGEVLWFGGSVTPMAL-LSFGLMVLSSVIAAWAD 193

Query: 178 YQFTV-----------------MAYSW-------ALAYLVSMTIDFVYIKHVVMTIGLNT 213
            Q  V                   Y+W         AYL+ M       + V+  +    
Sbjct: 194 IQAAVEGVGHTAEATDAISTLNAGYAWMGMNVFCTAAYLLGM-------RKVIKKMNFKD 246

Query: 214 WGLVLYNNL---EALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAI 270
           +  + YNNL     L++F L          IK+      +   F  ++  GL+ IF   I
Sbjct: 247 YDTMFYNNLLTIPVLIVFSLLFEDWSNDNLIKNFPVETRNSL-FIGMIYSGLAAIF---I 302

Query: 271 SFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQS 330
           S+    C R  S+T ++++G +NKL   +  L+ +D   T+     + +  + G++Y  S
Sbjct: 303 SYCSAWCIRVTSSTTYSMVGALNKLPLAISGLIFFDAPVTFGSVTAIFVGFVSGLVYTWS 362

Query: 331 TSNK 334
            + +
Sbjct: 363 KTRQ 366

Involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.

Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) (taxid: 367110)

>sp|Q84L09|GONS2_ARATH GDP-mannose transporter GONST2 OS=Arabidopsis thaliana GN=GONST2 PE=2 SV=1

 Score = 57.0 bits (136), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/302 (21%), Positives = 132/302 (43%), Gaps = 26/302 (8%)

Query: 44  AAGYCISASLLSIINKWAIMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHDAL------ 97
            A YCIS+  + I+NK  +  + +   ++ + Y      ++ C     L+   +      
Sbjct: 82  GAAYCISSCSMIILNKIVLSSYNFNAGVSLMLY----QNLISCLVVAVLDISGVVSVEKF 137

Query: 98  --ELLTVWRFLPAAIIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWP 155
             +L+ VW  +P  +IF   L +    L + NV    + ++A  I   IGE +++ +   
Sbjct: 138 NWKLIRVW--MPVNVIFVGMLVSGMYSLKYINVAMVTILKNATNILTGIGE-VYMFRKRQ 194

Query: 156 SIKTWLSLATIFGGSVIYVLTDYQFTVMAYSWALA-------YLVSMTIDFVYIKHVVMT 208
           + K W ++  +   ++   +TD  F  + Y+W LA       Y +++       K    +
Sbjct: 195 NNKVWAAMFMMIISAISGGITDLTFDAVGYTWQLANCFLTASYSLTLRRVMDKAKQSTKS 254

Query: 209 IGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGL 268
             LN   +VL NNL ++    + ++++GE + +     T      F VV     S   GL
Sbjct: 255 GSLNEVSMVLLNNLLSIPFGIILIILLGEWRYVISTDVTKDSM--FWVVATA--SGFLGL 310

Query: 269 AISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQ 328
           AISF           T ++++G +NK+   +  LV+++   +      +L  +  GV++ 
Sbjct: 311 AISFTSMWFLHQTGPTTYSLVGSLNKVPISLAGLVLFNVPLSLPNLFSILFGLFAGVVFA 370

Query: 329 QS 330
           ++
Sbjct: 371 RA 372

GDP-mannose transporter that may be involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	372
356494916	382	PREDICTED: GDP-mannose transporter GONST	0.981	0.955	0.797	1e-170
224107633	371	predicted protein [Populus trichocarpa]	0.986	0.989	0.819	1e-168
296089237	389	unnamed protein product [Vitis vinifera]	0.994	0.951	0.798	1e-167
225444217	374	PREDICTED: GDP-mannose transporter GONST	0.994	0.989	0.798	1e-167
147821912	626	hypothetical protein VITISV_022803 [Viti	0.975	0.579	0.804	1e-166
188509920	371	putative integral membrane protein [Goss	0.983	0.986	0.816	1e-166
449444192	378	PREDICTED: GDP-mannose transporter GONST	0.983	0.968	0.762	1e-163
15223013	372	golgi nucleotide sugar transporter 3 [Ar	0.981	0.981	0.795	1e-163
133902309	369	putative integral membrane protein [Goss	0.975	0.983	0.812	1e-163
133902302	369	putative integral membrane protein [Goss	0.975	0.983	0.807	1e-162

>gi|356494916|ref|XP_003516327.1| PREDICTED: GDP-mannose transporter GONST3-like [Glycine max]

 Score =  605 bits (1559), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 296/371 (79%), Positives = 327/371 (88%), Gaps = 6/371 (1%)

Query: 4   DEENPP----VARTPNNSETLSTSC-KTKLTWYDTLAHQASVYGVAAGYCISASLLSIIN 58
           D ENP     V +  +  E +S +   ++  WY +L HQ SVYGVAAGYC+SASLLSIIN
Sbjct: 6   DVENPSNNLTVQKGVDVKEDVSVNVSDSEGNWYTSLVHQISVYGVAAGYCLSASLLSIIN 65

Query: 59  KWAIMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIFYLSLFT 118
           KWA+MKFPYPGALTALQYFTSAAGVLL G  K LEHD L+L+T+W+FLPAAIIFYLSLFT
Sbjct: 66  KWAVMKFPYPGALTALQYFTSAAGVLLFGRLKLLEHDPLDLMTMWQFLPAAIIFYLSLFT 125

Query: 119 NSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDY 178
           NSELLLHANVDTFIVFRS VP+FVA+GETLFLHQPWPS KTW SL TIF GSV+YV+TDY
Sbjct: 126 NSELLLHANVDTFIVFRSVVPLFVAVGETLFLHQPWPSGKTWASLGTIFAGSVLYVVTDY 185

Query: 179 QFTVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGEL 238
           QFT MAY+WALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEAL+LFPLELLIMGEL
Sbjct: 186 QFTFMAYTWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALMLFPLELLIMGEL 245

Query: 239 KKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTV 298
           KKIKHE+   SDW+SF+V+LPVGLSC+FGL+ISFFGFSCRRAISATGFTVLGIVNKLLTV
Sbjct: 246 KKIKHEIQDESDWHSFQVILPVGLSCLFGLSISFFGFSCRRAISATGFTVLGIVNKLLTV 305

Query: 299 VINLVIWDKHSTWVGTVGLLICMLGGVMYQQSTSNKPKAVKETKAQESEEEQRKLLEMQN 358
           VINLVIWDKHSTWVGTVGLLICMLGG+MYQQSTS KPKA K+  AQE+EEE++KLLEMQ 
Sbjct: 306 VINLVIWDKHSTWVGTVGLLICMLGGIMYQQSTS-KPKAAKQVSAQENEEEEQKLLEMQV 364

Query: 359 NTETNNKEKEV 369
           N+ETN    EV
Sbjct: 365 NSETNINNNEV 375

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224107633|ref|XP_002314544.1| predicted protein [Populus trichocarpa] gi|222863584|gb|EEF00715.1| predicted protein [Populus trichocarpa]

 Score =  598 bits (1541), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 305/372 (81%), Positives = 336/372 (90%), Gaps = 5/372 (1%)

Query: 1   MSEDEENPPVARTPNNSETLSTSCKTKLTWYDTLAHQASVYGVAAGYCISASLLSIINKW 60
           MS D ENP        + + S + +T  TWY  L  Q S+YG+AAGYCISASLLSIINKW
Sbjct: 1   MSADMENPKAEEEQKGTGSASPANETPATWYSGLLKQTSIYGIAAGYCISASLLSIINKW 60

Query: 61  AIMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIFYLSLFTNS 120
           AIMKFPYPGALTALQYFTSAAGVL+CG+ K LEHD+L+LLT+WRFLPAAI+FYLSLFTNS
Sbjct: 61  AIMKFPYPGALTALQYFTSAAGVLVCGWCKVLEHDSLDLLTMWRFLPAAIMFYLSLFTNS 120

Query: 121 ELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDYQF 180
           ELLLHANVDTFIVFRS VPIFVAIGETLFLHQPWPS+KTWLSL+TIFGGSV+YVLTDYQF
Sbjct: 121 ELLLHANVDTFIVFRSLVPIFVAIGETLFLHQPWPSLKTWLSLSTIFGGSVLYVLTDYQF 180

Query: 181 TVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKK 240
           TVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLV+YNNLEALLLFPLELLIMGELKK
Sbjct: 181 TVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVVYNNLEALLLFPLELLIMGELKK 240

Query: 241 IKHEMTTASDWYSFEVVLPVGLSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVI 300
           IKHE++  SDW+SF VVLPVGLSC+FGLAISFFGFSCRRAISATG+TVLG+VNKLLTVVI
Sbjct: 241 IKHEISDESDWHSFAVVLPVGLSCLFGLAISFFGFSCRRAISATGYTVLGVVNKLLTVVI 300

Query: 301 NLVIWDKHSTWVGTVGLLICMLGGVMYQQSTSNKPKAVKETKAQESEEEQRKLLEMQNNT 360
           NLVIWDKHST+VGTVGLLICMLGG+MYQQSTS KPKAV E KA++++EEQ+KLLEMQ   
Sbjct: 301 NLVIWDKHSTFVGTVGLLICMLGGIMYQQSTS-KPKAVPEVKAEQTDEEQQKLLEMQ--- 356

Query: 361 ETNNKEKEVVES 372
            +NN EKEV +S
Sbjct: 357 -SNNNEKEVTQS 367

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296089237|emb|CBI39009.3| unnamed protein product [Vitis vinifera]

 Score =  594 bits (1531), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 297/372 (79%), Positives = 333/372 (89%), Gaps = 2/372 (0%)

Query: 1   MSEDEENPPVARTPNNSETLSTSCKTKLTWYDTLAHQASVYGVAAGYCISASLLSIINKW 60
           MS DEENP V  +    E  S+S + + TWY     QAS+YG+AAGYCISASLLSIINKW
Sbjct: 16  MSNDEENPKVRASQKGPENPSSS-EIQATWYSGFLQQASIYGIAAGYCISASLLSIINKW 74

Query: 61  AIMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIFYLSLFTNS 120
           A+MKFPYPGALTALQYFTSAAGV++CG+FK +EHD L+  T+WRFLPAA+IFYLSLFTNS
Sbjct: 75  AVMKFPYPGALTALQYFTSAAGVVICGWFKIIEHDPLDRSTMWRFLPAAVIFYLSLFTNS 134

Query: 121 ELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDYQF 180
           ELLLHANVDTFIVFRSAVPIFVAIGETL+L QPWP++KTWLSLATIFGGSV+YVLTDYQ 
Sbjct: 135 ELLLHANVDTFIVFRSAVPIFVAIGETLYLKQPWPTMKTWLSLATIFGGSVLYVLTDYQL 194

Query: 181 TVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKK 240
           T MAYSWALAYL+SM+IDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKK
Sbjct: 195 TFMAYSWALAYLISMSIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKK 254

Query: 241 IKHEMTTASDWYSFEVVLPVGLSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVI 300
           IKHE++  SDWYSF+VV PVGLSC+FGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVI
Sbjct: 255 IKHEISEESDWYSFQVVFPVGLSCMFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVI 314

Query: 301 NLVIWDKHSTWVGTVGLLICMLGGVMYQQSTSNKPKAVKETKAQESEEEQRKLLEMQNNT 360
           NL+IWDKHST+VGTVGLLICM+GG++YQQS SNKPKA  + K QES+EEQ+KLLEMQ+N 
Sbjct: 315 NLIIWDKHSTFVGTVGLLICMVGGILYQQSASNKPKAATDVKVQESQEEQQKLLEMQSN- 373

Query: 361 ETNNKEKEVVES 372
           E +N   E++ S
Sbjct: 374 EKSNDGNELINS 385

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225444217|ref|XP_002271444.1| PREDICTED: GDP-mannose transporter GONST3-like [Vitis vinifera]

 Score =  594 bits (1531), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 297/372 (79%), Positives = 333/372 (89%), Gaps = 2/372 (0%)

Query: 1   MSEDEENPPVARTPNNSETLSTSCKTKLTWYDTLAHQASVYGVAAGYCISASLLSIINKW 60
           MS DEENP V  +    E  S+S + + TWY     QAS+YG+AAGYCISASLLSIINKW
Sbjct: 1   MSNDEENPKVRASQKGPENPSSS-EIQATWYSGFLQQASIYGIAAGYCISASLLSIINKW 59

Query: 61  AIMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIFYLSLFTNS 120
           A+MKFPYPGALTALQYFTSAAGV++CG+FK +EHD L+  T+WRFLPAA+IFYLSLFTNS
Sbjct: 60  AVMKFPYPGALTALQYFTSAAGVVICGWFKIIEHDPLDRSTMWRFLPAAVIFYLSLFTNS 119

Query: 121 ELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDYQF 180
           ELLLHANVDTFIVFRSAVPIFVAIGETL+L QPWP++KTWLSLATIFGGSV+YVLTDYQ 
Sbjct: 120 ELLLHANVDTFIVFRSAVPIFVAIGETLYLKQPWPTMKTWLSLATIFGGSVLYVLTDYQL 179

Query: 181 TVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKK 240
           T MAYSWALAYL+SM+IDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKK
Sbjct: 180 TFMAYSWALAYLISMSIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKK 239

Query: 241 IKHEMTTASDWYSFEVVLPVGLSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVI 300
           IKHE++  SDWYSF+VV PVGLSC+FGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVI
Sbjct: 240 IKHEISEESDWYSFQVVFPVGLSCMFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVI 299

Query: 301 NLVIWDKHSTWVGTVGLLICMLGGVMYQQSTSNKPKAVKETKAQESEEEQRKLLEMQNNT 360
           NL+IWDKHST+VGTVGLLICM+GG++YQQS SNKPKA  + K QES+EEQ+KLLEMQ+N 
Sbjct: 300 NLIIWDKHSTFVGTVGLLICMVGGILYQQSASNKPKAATDVKVQESQEEQQKLLEMQSN- 358

Query: 361 ETNNKEKEVVES 372
           E +N   E++ S
Sbjct: 359 EKSNDGNELINS 370

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147821912|emb|CAN61662.1| hypothetical protein VITISV_022803 [Vitis vinifera]

 Score =  591 bits (1523), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 293/364 (80%), Positives = 329/364 (90%), Gaps = 1/364 (0%)

Query: 1   MSEDEENPPVARTPNNSETLSTSCKTKLTWYDTLAHQASVYGVAAGYCISASLLSIINKW 60
           MS DEENP V  +    E  S+S + + TWY     QAS+YG+AAGYCISASLLSIINKW
Sbjct: 253 MSNDEENPKVRASQKGPENPSSS-EIQATWYSGFLQQASIYGIAAGYCISASLLSIINKW 311

Query: 61  AIMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIFYLSLFTNS 120
           A+MKFPYPGALTALQYFTSAAGV++CG+FK +EHD L+  T+WRFLPAA+IFYLSLFTNS
Sbjct: 312 AVMKFPYPGALTALQYFTSAAGVVICGWFKIIEHDPLDRSTMWRFLPAAVIFYLSLFTNS 371

Query: 121 ELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDYQF 180
           ELLLHANVDTFIVFRSAVPIFVAIGETL+L QPWP++K WLSLATIFGGSV+YVLTDYQ 
Sbjct: 372 ELLLHANVDTFIVFRSAVPIFVAIGETLYLKQPWPTMKMWLSLATIFGGSVLYVLTDYQL 431

Query: 181 TVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKK 240
           T MAYSWALAYL+SM+IDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKK
Sbjct: 432 TFMAYSWALAYLISMSIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKK 491

Query: 241 IKHEMTTASDWYSFEVVLPVGLSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVI 300
           IKHE++  SDWYSF+VV PVGLSC+FGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVI
Sbjct: 492 IKHEISEESDWYSFQVVFPVGLSCLFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVI 551

Query: 301 NLVIWDKHSTWVGTVGLLICMLGGVMYQQSTSNKPKAVKETKAQESEEEQRKLLEMQNNT 360
           NL+IWDKHST+VGTVGLLICM+GG++YQQS SNKPKA  + K QES+EEQ+KLLEMQ+N 
Sbjct: 552 NLIIWDKHSTFVGTVGLLICMVGGILYQQSASNKPKAATDVKVQESQEEQQKLLEMQSNE 611

Query: 361 ETNN 364
           ++N+
Sbjct: 612 KSND 615

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|188509920|gb|ACD56609.1| putative integral membrane protein [Gossypioides kirkii]

 Score =  590 bits (1521), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 303/371 (81%), Positives = 331/371 (89%), Gaps = 5/371 (1%)

Query: 1   MSEDEENPPVARTPNNSETLSTSCKTKLTWYDTLAHQASVYGVAAGYCISASLLSIINKW 60
           MS+D E+P   R P   E L  S   + TWY  +  Q SVYGVAAGYCISASLLSIINKW
Sbjct: 1   MSKDVEDP-ADRGP---EVLVPSGDAQETWYSFVLKQVSVYGVAAGYCISASLLSIINKW 56

Query: 61  AIMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIFYLSLFTNS 120
           A+MKFPYPGALTALQY TSAAGV+LCG+FK LEHD L+LLT+WRFLPAAIIFYLSLFTNS
Sbjct: 57  AVMKFPYPGALTALQYLTSAAGVVLCGWFKVLEHDRLDLLTMWRFLPAAIIFYLSLFTNS 116

Query: 121 ELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDYQF 180
           ELLLHANVDTFIVFRSAVPIFVAIGETLFL QPWPS+KTW+SL TIFGGSV+YVLTDYQF
Sbjct: 117 ELLLHANVDTFIVFRSAVPIFVAIGETLFLSQPWPSLKTWISLGTIFGGSVLYVLTDYQF 176

Query: 181 TVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKK 240
           T+ AY+WA AYLVSM+IDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKK
Sbjct: 177 TLTAYTWAAAYLVSMSIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKK 236

Query: 241 IKHEMTTASDWYSFEVVLPVGLSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVI 300
           IKHE++  SDW+SF+V+LPVGLSC+FGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVI
Sbjct: 237 IKHEISDESDWHSFQVILPVGLSCLFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVI 296

Query: 301 NLVIWDKHSTWVGTVGLLICMLGGVMYQQSTSNKPKAVKETKAQESEEEQRKLLEMQNNT 360
           NLVIWDKHST+VGTVGLLICMLGGVMYQQSTS+KPK V E   QE+EE+Q KLLEMQNN+
Sbjct: 297 NLVIWDKHSTFVGTVGLLICMLGGVMYQQSTSSKPKTVSEATVQETEEQQ-KLLEMQNNS 355

Query: 361 ETNNKEKEVVE 371
           +  N +KE  E
Sbjct: 356 QAKNNDKEDTE 366

Source: Gossypioides kirkii

Species: Gossypioides kirkii

Genus: Gossypioides

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449444192|ref|XP_004139859.1| PREDICTED: GDP-mannose transporter GONST3-like [Cucumis sativus] gi|449521993|ref|XP_004168013.1| PREDICTED: GDP-mannose transporter GONST3-like [Cucumis sativus]

 Score =  582 bits (1500), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 283/371 (76%), Positives = 323/371 (87%), Gaps = 5/371 (1%)

Query: 4   DEENPPVARTPNNSETLSTSC---KTKLTWYDTLAHQASVYGVAAGYCISASLLSIINKW 60
           +E++  + +     E L  S    ++   WY  +  Q SVYGVA GYC+SASLLSIINKW
Sbjct: 3   NEDDIEIFKVDKVQEGLGASALSDESPSNWYTIVLQQVSVYGVAVGYCVSASLLSIINKW 62

Query: 61  AIMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIFYLSLFTNS 120
           A+MKFPYPGALTALQYFTSAAGV +CG   F+EHD L+LLT+WRFLPAAIIFYLSLFTNS
Sbjct: 63  AVMKFPYPGALTALQYFTSAAGVFVCGCAGFIEHDRLDLLTMWRFLPAAIIFYLSLFTNS 122

Query: 121 ELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDYQF 180
           ELLLHANVDTFIVFRS VPIFVAIGETLFLHQPWPS+KTWLSLATI GGS++YVLTDYQF
Sbjct: 123 ELLLHANVDTFIVFRSVVPIFVAIGETLFLHQPWPSMKTWLSLATILGGSILYVLTDYQF 182

Query: 181 TVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKK 240
           T+ AY WALAYL+SM+IDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLEL IMGELKK
Sbjct: 183 TLTAYFWALAYLISMSIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELFIMGELKK 242

Query: 241 IKHEMTTASDWYSFEVVLPVGLSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVI 300
           IK E++  SDW+SFEVVLPVGLSC+FGL+ISFFGFSCRRAISATGFTVLGIVNKLLTVVI
Sbjct: 243 IKQEISDESDWHSFEVVLPVGLSCLFGLSISFFGFSCRRAISATGFTVLGIVNKLLTVVI 302

Query: 301 NLVIWDKHSTWVGTVGLLICMLGGVMYQQSTSNKPKAV-KETKAQES-EEEQRKLLEMQN 358
           NLVIWDKHST++GTVGLLICM GG++YQQSTS+KPKA  KE + +E+ +EEQ+KLLEMQ+
Sbjct: 303 NLVIWDKHSTFIGTVGLLICMSGGILYQQSTSSKPKAATKEVRVEEAVDEEQQKLLEMQS 362

Query: 359 NTETNNKEKEV 369
            + + + E +V
Sbjct: 363 VSNSGSAENKV 373

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15223013|ref|NP_177760.1| golgi nucleotide sugar transporter 3 [Arabidopsis thaliana] gi|75198562|sp|Q9S845.1|GONS3_ARATH RecName: Full=GDP-mannose transporter GONST3; AltName: Full=Protein GOLGI NUCLEOTIDE SUGAR TRANSPORTER 3 gi|6554485|gb|AAF16667.1|AC012394_16 unknown protein; 69155-70273 [Arabidopsis thaliana] gi|6573714|gb|AAF17634.1|AC009978_10 T23E18.26 [Arabidopsis thaliana] gi|29329821|emb|CAD83087.1| GONST3 Golgi Nucleotide sugar transporter [Arabidopsis thaliana] gi|332197705|gb|AEE35826.1| golgi nucleotide sugar transporter 3 [Arabidopsis thaliana]

 Score =  581 bits (1497), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 296/372 (79%), Positives = 324/372 (87%), Gaps = 7/372 (1%)

Query: 2   SEDEENPPVARTPNNSETLSTSCKTKLTWYDTLAHQASVYGVAAGYCISASLLSIINKWA 61
           + DEEN  V    N  E       +  TWY     QASVYGVAAGYC+SASLLSIINKWA
Sbjct: 3   TNDEENGTVIEVKNVPE------PSPETWYSVFLRQASVYGVAAGYCLSASLLSIINKWA 56

Query: 62  IMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIFYLSLFTNSE 121
           IMKFPYPGALTA+QYFTSAAGVLLC   K +EHD+L LLT+WRFLPAA+IFYLSLFTNSE
Sbjct: 57  IMKFPYPGALTAMQYFTSAAGVLLCAQMKLIEHDSLNLLTMWRFLPAAMIFYLSLFTNSE 116

Query: 122 LLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDYQFT 181
           LLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPS+KTW SLATIFGGS++YV TDYQFT
Sbjct: 117 LLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSVKTWGSLATIFGGSLLYVFTDYQFT 176

Query: 182 VMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKI 241
           + AYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKI
Sbjct: 177 IAAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKI 236

Query: 242 KHEMTTASDWYSFEVVLPVGLSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVIN 301
           KHE+T  +DWYS +VVLPVGLSC+FGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVIN
Sbjct: 237 KHEITDETDWYSLQVVLPVGLSCLFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVIN 296

Query: 302 LVIWDKHSTWVGTVGLLICMLGGVMYQQSTSNKPKAVKETKAQESEEEQRKLLEMQNNTE 361
           L++WDKHST+VGT+GLL+CM GGVMYQQST  KP A +E K QE +EEQ KLLEMQ N E
Sbjct: 297 LMVWDKHSTFVGTLGLLVCMFGGVMYQQSTIKKPNATQEAKPQEQDEEQEKLLEMQENKE 356

Query: 362 TNNKE-KEVVES 372
           +N+ + KE ++S
Sbjct: 357 SNSVDIKETLKS 368

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|133902309|gb|ABO41839.1| putative integral membrane protein [Gossypium arboreum] gi|133902315|gb|ABO41844.1| putative integral membrane protein [Gossypium hirsutum]

 Score =  579 bits (1492), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 299/368 (81%), Positives = 327/368 (88%), Gaps = 5/368 (1%)

Query: 1   MSEDEENPPVARTPNNSETLSTSCKTKLTWYDTLAHQASVYGVAAGYCISASLLSIINKW 60
           MS+D E+P   R P   E L  S   + TWY  +  Q SVYGVAAGYCISASLLSIINKW
Sbjct: 1   MSKDVEDP-ADRGP---EVLVPSGDAQETWYSCVLKQVSVYGVAAGYCISASLLSIINKW 56

Query: 61  AIMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIFYLSLFTNS 120
           A+MKFPYPGALTALQY TSAAGV+LCG+FK LEHD L+L T+ +FLPAAIIFYLSLFTNS
Sbjct: 57  AVMKFPYPGALTALQYLTSAAGVVLCGWFKVLEHDPLDLRTMGQFLPAAIIFYLSLFTNS 116

Query: 121 ELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDYQF 180
           ELLLHANVDTFIVFRSAVPIFVAIGETL+L QPWPS+KTW+SL TIFGGSV+YVLTDYQF
Sbjct: 117 ELLLHANVDTFIVFRSAVPIFVAIGETLYLSQPWPSLKTWISLGTIFGGSVLYVLTDYQF 176

Query: 181 TVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKK 240
           T+ AY+WA AYLVSM+IDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKK
Sbjct: 177 TLTAYTWAAAYLVSMSIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKK 236

Query: 241 IKHEMTTASDWYSFEVVLPVGLSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVI 300
           IKHE++  SDW+SF+V+LPVGLSC+FGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVI
Sbjct: 237 IKHEISDESDWHSFQVILPVGLSCLFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVI 296

Query: 301 NLVIWDKHSTWVGTVGLLICMLGGVMYQQSTSNKPKAVKETKAQESEEEQRKLLEMQNNT 360
           NLVIWDKHST+VGTVGLLICMLGGVMYQQSTS KPKAV E   QE+EE+Q  LLEMQNN+
Sbjct: 297 NLVIWDKHSTFVGTVGLLICMLGGVMYQQSTSCKPKAVSEATVQETEEQQN-LLEMQNNS 355

Query: 361 ETNNKEKE 368
           +  N EKE
Sbjct: 356 QAKNNEKE 363

Source: Gossypium arboreum

Species: Gossypium arboreum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|133902302|gb|ABO41833.1| putative integral membrane protein [Gossypium raimondii]

 Score =  578 bits (1491), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 297/368 (80%), Positives = 326/368 (88%), Gaps = 5/368 (1%)

Query: 1   MSEDEENPPVARTPNNSETLSTSCKTKLTWYDTLAHQASVYGVAAGYCISASLLSIINKW 60
           MS+D E+P         E L  S   + TWY  +  Q SVYGVAAGYCISASLLSIINKW
Sbjct: 1   MSKDVEDP----ADCGPEVLVPSGDAQETWYSCVLKQVSVYGVAAGYCISASLLSIINKW 56

Query: 61  AIMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIFYLSLFTNS 120
           A+MKFPYPGALTALQY TSAAGV+LCG+FK LEHD L+L T+ +FLPAAIIFYLSLFTNS
Sbjct: 57  AVMKFPYPGALTALQYLTSAAGVVLCGWFKVLEHDPLDLRTMGQFLPAAIIFYLSLFTNS 116

Query: 121 ELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDYQF 180
           ELLLHANVDTFIVFRSAVPIFVAIGETL+L QPWPS+KTW+SL TIFGGSV+YVLTDYQF
Sbjct: 117 ELLLHANVDTFIVFRSAVPIFVAIGETLYLSQPWPSLKTWISLGTIFGGSVLYVLTDYQF 176

Query: 181 TVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKK 240
           T+ AY+WA AYLVSM+IDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKK
Sbjct: 177 TLTAYTWAAAYLVSMSIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKK 236

Query: 241 IKHEMTTASDWYSFEVVLPVGLSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVI 300
           IKHE++  SDW+SF+V+LPVGLSC+FGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVI
Sbjct: 237 IKHEISDESDWHSFQVILPVGLSCLFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVI 296

Query: 301 NLVIWDKHSTWVGTVGLLICMLGGVMYQQSTSNKPKAVKETKAQESEEEQRKLLEMQNNT 360
           NLVIWDKHST+VGTVGLLICMLGGVMYQQSTS+KPKAV E   QE+EE+Q  LLEMQNN+
Sbjct: 297 NLVIWDKHSTFVGTVGLLICMLGGVMYQQSTSSKPKAVSEATVQETEEQQN-LLEMQNNS 355

Query: 361 ETNNKEKE 368
           +  N EKE
Sbjct: 356 QAKNNEKE 363

Source: Gossypium raimondii

Species: Gossypium raimondii

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	372
TAIR|locus:2014634	372	GONST3 "golgi nucleotide sugar	0.940	0.940	0.75	7e-141
TAIR|locus:2147655	341	GONST4 "golgi nucleotide sugar	0.844	0.920	0.479	3.3e-70
TAIR|locus:2054090	333	GONST1 "AT2G13650" [Arabidopsi	0.400	0.447	0.262	1.6e-11
TAIR|locus:2124819	323	UTr7 "UDP-galactose transporte	0.470	0.541	0.237	2.3e-10
UNIPROTKB|Q9NTN3	355	SLC35D1 "UDP-glucuronic acid/U	0.857	0.898	0.207	6.2e-10
UNIPROTKB|J9NSF8	355	SLC35D1 "Uncharacterized prote	0.787	0.825	0.204	2.3e-09
UNIPROTKB|Q15B89	343	SLC35D2 "UDP-N-acetylglucosami	0.811	0.880	0.198	2.8e-09
UNIPROTKB|A2VE55	355	SLC35D2 "UDP-N-acetylglucosami	0.787	0.825	0.201	6.7e-09
UNIPROTKB|F1NCG7	350	SLC35D1 "Uncharacterized prote	0.784	0.834	0.196	1.4e-08
ZFIN|ZDB-GENE-040426-1213	363	slc35d1b "solute carrier famil	0.790	0.809	0.210	5.9e-08

TAIR|locus:2014634 GONST3 "golgi nucleotide sugar transporter 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 1378 (490.1 bits), Expect = 7.0e-141, P = 7.0e-141
 Identities = 267/356 (75%), Positives = 290/356 (81%)

Query:     2 SEDEENPPVARTPNNSETLSTSCKTKLTWYDTLAHQASVYGVAAGYCISASLLSIINKWA 61
             + DEEN  V    N  E       +  TWY     QASVYGVAAGYC+SASLLSIINKWA
Sbjct:     3 TNDEENGTVIEVKNVPEP------SPETWYSVFLRQASVYGVAAGYCLSASLLSIINKWA 56

Query:    62 IMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIFYLSLFTNSE 121
             IMKFPYPGALTA+QYFTSAAGVLLC   K +EHD+L LLT+WRFLPAA+IFYLSLFTNSE
Sbjct:    57 IMKFPYPGALTAMQYFTSAAGVLLCAQMKLIEHDSLNLLTMWRFLPAAMIFYLSLFTNSE 116

Query:   122 LLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDYQFT 181
             LLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPS+KTW SLATIFGGS++YV TDYQFT
Sbjct:   117 LLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSVKTWGSLATIFGGSLLYVFTDYQFT 176

Query:   182 VMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGXXXXXXXXXXXXXXXXXXXXXXXKKI 241
             + AYSWALAYLVSMTIDFVYIKHVVMTIGLNTWG                       KKI
Sbjct:   177 IAAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKI 236

Query:   242 KHEMTTASDWYSFEVVLPVGLSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVIN 301
             KHE+T  +DWYS +VVLPVGLSC+FGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVIN
Sbjct:   237 KHEITDETDWYSLQVVLPVGLSCLFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVIN 296

Query:   302 LVIWDKHSTWVGTVGLLICMLGGVMYQQSTSNKPKAVKETKAQESEEEQRKLLEMQ 357
             L++WDKHST+VGT+GLL+CM GGVMYQQST  KP A +E K QE +EEQ KLLEMQ
Sbjct:   297 LMVWDKHSTFVGTLGLLVCMFGGVMYQQSTIKKPNATQEAKPQEQDEEQEKLLEMQ 352

GO:0005886 "plasma membrane" evidence=ISM

GO:0016020 "membrane" evidence=ISS

GO:0015780 "nucleotide-sugar transport" evidence=IGI

TAIR|locus:2147655 GONST4 "golgi nucleotide sugar transporter 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 711 (255.3 bits), Expect = 3.3e-70, P = 3.3e-70
 Identities = 152/317 (47%), Positives = 195/317 (61%)

Query:    37 QASVYGVAAGYCISASLLSIINKWAIMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHDA 96
             Q +   +  GY + +SLL++INK AI  F YPG LTALQY T    V L G    + HD 
Sbjct:    11 QLTTSSLVIGYALCSSLLAVINKLAITYFNYPGLLTALQYLTCTVAVYLLGKSGLINHDP 70

Query:    97 LELLTVWRFLPAAIIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPS 156
                 T  +FLPAAI+FYL++FTN+ LL HANVDTFIVFRS  P+ VAI +T+F  QP PS
Sbjct:    71 FTWDTAKKFLPAAIVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVAIADTVFRSQPLPS 130

Query:   157 IKTWLSLATIFGGSVIYVLTDYQFTVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGX 216
               T+LSL  I  G+V YV TD  FT+ AYSWALAYLV++T + VYIKH+V  I LN WG 
Sbjct:   131 RLTFLSLVVILAGAVGYVATDSSFTLTAYSWALAYLVTITTEMVYIKHMVSNIKLNIWGL 190

Query:   217 XXXXXXXXXXXXXXXXXXXXXXKKIKHEMT-TASDWYSFEVVLPVGLSCIFGLAISFFGF 275
                                    ++   ++    + +       V  SC+FG  IS+FGF
Sbjct:   191 VLYNNLLSLMIAPVFWFLTGEFTEVFAALSENRGNLFEPYAFSSVAASCVFGFLISYFGF 250

Query:   276 SCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQSTS-NK 334
             + R AISAT FTV G+VNK LTVVIN++IWDKH+T VG V LL  + GGV YQQS   +K
Sbjct:   251 AARNAISATAFTVTGVVNKFLTVVINVLIWDKHATPVGLVCLLFTICGGVGYQQSVKLDK 310

Query:   335 P-KAVKETKAQESEEEQ 350
             P + V E  +++ EE++
Sbjct:   311 PIEKVSEKDSEKGEEDE 327

GO:0005886 "plasma membrane" evidence=ISM

GO:0016020 "membrane" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0015780 "nucleotide-sugar transport" evidence=IGI

TAIR|locus:2054090 GONST1 "AT2G13650" [Arabidopsis thaliana (taxid:3702)]

 Score = 143 (55.4 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
 Identities = 42/160 (26%), Positives = 75/160 (46%)

Query:    36 HQASVYGVAAGYCISASLLSIINKWAIMKFPYPGALTALQY--FTSA---AGVLLCGYFK 90
             ++A + G+A  YCIS+  + ++NK+ +  + +   +  + Y  F S     G+ L G   
Sbjct:    31 NRALLSGLA--YCISSCSMILVNKFVLSSYNFNAGIFLMLYQNFVSVIIVVGLSLMGLIT 88

Query:    91 FLEHDALELLTVWRFLPAAIIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFL 150
               E   L L+ VW   P  +IF   L T+   L + NV    V ++   +  A+GE ++L
Sbjct:    89 -TEPLTLRLMKVW--FPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGE-MYL 144

Query:   151 HQPWPSIKTWLSLATIFGGSVIYVLTDYQFTVMAYSWALA 190
                    + W +L  +   +V   +TD  F  + Y+W +A
Sbjct:   145 FNKQHDNRVWAALFLMIISAVSGGITDLSFNAVGYAWQIA 184

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0005886 "plasma membrane" evidence=ISM

GO:0055085 "transmembrane transport" evidence=ISS

GO:0005458 "GDP-mannose transmembrane transporter activity" evidence=IDA

GO:0015784 "GDP-mannose transport" evidence=IGI;IDA;IMP

TAIR|locus:2124819 UTr7 "UDP-galactose transporter 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 132 (51.5 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
 Identities = 42/177 (23%), Positives = 79/177 (44%)

Query:    38 ASVYGVAA-GYCISASLLSIINKWAIMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHDA 96
             +S+  VAA  Y I++  +  INK  IM++P+   +  LQ   ++  +       +     
Sbjct:    11 SSISLVAAVSYGIASMAMVFINKAVIMQYPHSMTVLTLQQLATSLLIHFGRRMGYTRAKG 70

Query:    97 LELLTVWRFLPAAIIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPS 156
             +++ T  + LP +I +  ++      L   N+  +I  +   P+ V I   LF  +  P+
Sbjct:    71 IDMATAKKLLPVSIFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLISGVLF-GKGKPT 129

Query:   157 IKTWLSLATIFGGSVIYVLTDYQFTVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNT 213
              +  LS+     G VI  L D+ F +  Y  AL  +   T+  V ++      GL++
Sbjct:   130 TQVALSVLLTAAGCVIAALGDFSFDLFGYGLALTSVFFQTMYLVLVEKSGAEDGLSS 186

GO:0005886 "plasma membrane" evidence=ISM

GO:0016020 "membrane" evidence=ISS

GO:0005459 "UDP-galactose transmembrane transporter activity" evidence=IDA

GO:0005460 "UDP-glucose transmembrane transporter activity" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0015785 "UDP-galactose transport" evidence=IDA

GO:0015786 "UDP-glucose transport" evidence=IDA

GO:0048527 "lateral root development" evidence=IMP

GO:0080147 "root hair cell development" evidence=IMP

UNIPROTKB|Q9NTN3 SLC35D1 "UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter" [Homo sapiens (taxid:9606)]

 Score = 167 (63.8 bits), Expect = 6.2e-10, P = 6.2e-10
 Identities = 70/338 (20%), Positives = 135/338 (39%)

Query:    14 PNNSETLSTSCKTKLTWYDTLAHQASVYGVAAG-YCISASLLSIINKWAIMKFPYPGAL- 71
             P  S TL    +  +   +TL     +  +AAG Y +S+ L+ ++NK  +  + +P +L 
Sbjct:    17 PAKSSTLRDEEELGMASAETLTVFLKL--LAAGFYGVSSFLIVVVNKSVLTNYRFPSSLC 74

Query:    72 TALQYFTSAAGVLLCGY-FKFLEHDALELLTVWRFLPAAIIFYLSLFTNSELLLHANVDT 130
               L    +   VL  G   + ++   L+     +  P  ++++ +  T        N+  
Sbjct:    75 VGLGQMVATVAVLWVGKALRVVKFPDLDRNVPRKTFPLPLLYFGNQITGLFSTKKLNLPM 134

Query:   131 FIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFG---GSVIYVLTDYQFTVMAYSW 187
             F V R    +F    E + L + +    +W    T+F    G+ +   +D  F +  Y++
Sbjct:   135 FTVLRRFSILFTMFAEGVLLKKTF----SWGIKMTVFAMIIGAFVAASSDLAFDLEGYAF 190

Query:   188 ALAYLVSMTIDFVYIKHVVMTIGLNTWGXXXXXXXXXXXXXXXXXXXXXXXKK-IKHEMT 246
              L   V    +  Y+K  + +  L  +G                       +K ++ E  
Sbjct:   191 ILINDVLTAANGAYVKQKLDSKELGKYGLLYYNALFMILPTLAIAYFTGDAQKAVEFE-- 248

Query:   247 TASDWYSFEVVLPVGLSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIW- 305
                 W     +L   LSC+ G  + +    C +  SA   T++G +  +L   I +V   
Sbjct:   249 ---GWADTLFLLQFTLSCVMGFILMYATVLCTQYNSALTTTIVGCIKNILITYIGMVFGG 305

Query:   306 DKHSTWVGTVGLLICMLGGVMYQQSTSNKPKAVKETKA 343
             D   TW   +GL I + G ++Y   T  + +  K+++A
Sbjct:   306 DYIFTWTNFIGLNISIAGSLVYSYITFTEEQLSKQSEA 343

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0048706 "embryonic skeletal system development" evidence=IEA

GO:0030206 "chondroitin sulfate biosynthetic process" evidence=NAS

GO:0030176 "integral to endoplasmic reticulum membrane" evidence=NAS

GO:0005463 "UDP-N-acetylgalactosamine transmembrane transporter activity" evidence=NAS

GO:0015789 "UDP-N-acetylgalactosamine transport" evidence=NAS

GO:0005461 "UDP-glucuronic acid transmembrane transporter activity" evidence=TAS

GO:0005789 "endoplasmic reticulum membrane" evidence=TAS

GO:0006065 "UDP-glucuronate biosynthetic process" evidence=TAS

GO:0006805 "xenobiotic metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

GO:0055085 "transmembrane transport" evidence=TAS

GO:0015787 "UDP-glucuronic acid transport" evidence=TAS

UNIPROTKB|J9NSF8 SLC35D1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 162 (62.1 bits), Expect = 2.3e-09, P = 2.3e-09
 Identities = 63/308 (20%), Positives = 122/308 (39%)

Query:    43 VAAG-YCISASLLSIINKWAIMKFPYPGAL-TALQYFTSAAGVLLCGY-FKFLEHDALEL 99
             +AAG Y +S+ L+ ++NK  +  + +P +L   L    +   VL  G   + ++   L+ 
Sbjct:    44 LAAGFYGVSSFLIVVVNKSVLTNYRFPSSLCVGLGQMVATVAVLWVGKALRVVKFPDLDR 103

Query:   100 LTVWRFLPAAIIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKT 159
                 +  P  ++++ +  T        N+  F V R    +F    E + L + +    +
Sbjct:   104 NVPRKTFPLPLLYFGNQITGLFSTKKLNLPMFTVLRRFSILFTMFAEGVLLKKTF----S 159

Query:   160 WLSLATIFG---GSVIYVLTDYQFTVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGX 216
             W    T+F    G+ +   +D  F +  Y + L   V    +  Y+K  + +  L  +G 
Sbjct:   160 WGIKMTVFAMIIGAFVAASSDLAFDLEGYVFILINDVLTAANGAYVKQKLDSKELGKYGL 219

Query:   217 XXXXXXXXXXXXXXXXXXXXXXKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFFGFS 276
                                   +K          W     +L   LSC+ G  + +    
Sbjct:   220 LYYNALFMILPTLAIAYFTGDAQKAMD----FEGWADTLFLLQFTLSCVMGFILMYATVL 275

Query:   277 CRRAISATGFTVLGIVNKLLTVVINLVIW-DKHSTWVGTVGLLICMLGGVMYQQSTSNKP 335
             C +  SA   T++G +  +L   I +V   D   TW   +GL I + G ++Y   T ++ 
Sbjct:   276 CTQYNSALTTTIVGCIKNILITYIGMVFGGDYIFTWTNFIGLNISIAGSLVYSYITFSEE 335

Query:   336 KAVKETKA 343
             +  K+++A
Sbjct:   336 QLSKQSEA 343

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q15B89 SLC35D2 "UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter" [Sus scrofa (taxid:9823)]

 Score = 161 (61.7 bits), Expect = 2.8e-09, P = 2.8e-09
 Identities = 63/317 (19%), Positives = 124/317 (39%)

Query:    43 VAAG-YCISASLLSIINKWAIMKFPYPGAL-TALQYFTSAAGVLLCGY-FKFLEHDALEL 99
             +AAG Y +S+ L+ ++NK  +  + +P +L   L    +   VL  G   + ++    + 
Sbjct:    32 LAAGFYGVSSFLIVVVNKSVLTNYRFPSSLCVGLGQMVATVAVLWVGKALRVVKFPDFDR 91

Query:   100 LTVWRFLPAAIIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKT 159
                 +  P  ++++ +  T        N+  F V R    +F    E + L + +    +
Sbjct:    92 NVPRKTFPLPLLYFGNQITGLFSTKKLNLPMFTVLRRFSILFTMFAEGVLLKKTF----S 147

Query:   160 WLSLATIFG---GSVIYVLTDYQFTVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGX 216
             W    T+F    G+ +   +D  F +  Y + L   V    +  Y+K  + +  L  +G 
Sbjct:   148 WGIKMTVFAMIIGAFVAASSDLAFDLEGYVFILINDVLTAANGAYVKQKLDSKELGKYGL 207

Query:   217 XXXXXXXXXXXXXXXXXXXXXXKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFFGFS 276
                                   +K          W     +L   LSC+ G  + +    
Sbjct:   208 LYYNALFMILPTLAIAYITGDAQKAMD----FEGWADTLFLLQFTLSCVMGFILMYATVL 263

Query:   277 CRRAISATGFTVLGIVNKLLTVVINLVIW-DKHSTWVGTVGLLICMLGGVMYQQSTSNKP 335
             C +  SA   T++G +  +L   I +V   D   TW   +GL I + G ++Y   T ++ 
Sbjct:   264 CTQYNSALTTTIVGCIKNILITYIGMVFGGDYIFTWTNFIGLNISIAGSLVYSYITFSEE 323

Query:   336 KAVKETKAQESEEEQRK 352
             +  K+++A    + + K
Sbjct:   324 QLSKQSEASNKLDNKGK 340

GO:0000139 "Golgi membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

UNIPROTKB|A2VE55 SLC35D2 "UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter" [Bos taurus (taxid:9913)]

 Score = 158 (60.7 bits), Expect = 6.7e-09, P = 6.7e-09
 Identities = 62/308 (20%), Positives = 121/308 (39%)

Query:    43 VAAG-YCISASLLSIINKWAIMKFPYPGAL-TALQYFTSAAGVLLCGY-FKFLEHDALEL 99
             +AAG Y +S+ L+ ++NK  +  + +P +L   L    +   VL  G   + ++    + 
Sbjct:    44 LAAGFYGVSSFLIVVVNKSVLTNYRFPSSLCVGLGQMVATVAVLWVGKALRVVKFPDFDR 103

Query:   100 LTVWRFLPAAIIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKT 159
                 +  P  ++++ +  T        N+  F V R    +F    E + L + +    +
Sbjct:   104 NVPRKTFPLPLLYFGNQITGLFSTKKLNLPMFTVLRRFSILFTMFAEGVLLKKTF----S 159

Query:   160 WLSLATIFG---GSVIYVLTDYQFTVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGX 216
             W    T+F    G+ +   +D  F +  Y + L   V    +  Y+K  + +  L  +G 
Sbjct:   160 WGIKMTVFAMIIGAFVAASSDLAFDLEGYVFILINDVLTAANGAYVKQKLDSKELGKYGL 219

Query:   217 XXXXXXXXXXXXXXXXXXXXXXKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFFGFS 276
                                   +K          W     +L   LSC+ G  + +    
Sbjct:   220 LYYNALFMILPTLAIAYFTGDAQKA----LDFEGWADTLFLLQFTLSCVMGFILMYATVL 275

Query:   277 CRRAISATGFTVLGIVNKLLTVVINLVIW-DKHSTWVGTVGLLICMLGGVMYQQSTSNKP 335
             C +  SA   T++G +  +L   I +V   D   TW   +GL I + G ++Y   T ++ 
Sbjct:   276 CTQYNSALTTTIVGCIKNILITYIGMVFGGDYIFTWTNFIGLNISIAGSLVYSYITFSEE 335

Query:   336 KAVKETKA 343
             +  K+++A
Sbjct:   336 QLSKQSEA 343

GO:0000139 "Golgi membrane" evidence=IEA

GO:0048706 "embryonic skeletal system development" evidence=IEA

GO:0030206 "chondroitin sulfate biosynthetic process" evidence=IEA

GO:0015165 "pyrimidine nucleotide-sugar transmembrane transporter activity" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

UNIPROTKB|F1NCG7 SLC35D1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 155 (59.6 bits), Expect = 1.4e-08, P = 1.4e-08
 Identities = 60/306 (19%), Positives = 115/306 (37%)

Query:    44 AAGYCISASLLSIINKWAIMKFPYPGAL-TALQYFTSAAGVLLCGY-FKFLEHDALELLT 101
             AA Y +S+  + ++NK  +  + +P +L   L    +   VL  G   + L+   L+   
Sbjct:    41 AAFYGLSSFFIVVVNKSVLTTYGFPSSLCVGLGQMLATVAVLRAGKALRLLKFPDLDRHV 100

Query:   102 VWRFLPAAIIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWL 161
               R  P  ++++ +  T        N+  F V R    +F    E + L + +    +W 
Sbjct:   101 PRRTFPLPLLYFGNQITGLFSTKKLNLPMFTVLRRFSILFTMFAEGVLLKKKF----SWS 156

Query:   162 SLATIFG---GSVIYVLTDYQFTVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGXXX 218
                T+F    G+ +    D  F +  Y + L        +  Y+K  + +  L  +G   
Sbjct:   157 VQMTVFAMIIGAFVAASADLAFDLEGYIFILINDALTAANGAYVKQKLDSKELGKYGLLY 216

Query:   219 XXXXXXXXXXXXXXXXXXXXKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFFGFSCR 278
                                 +K          W     ++   LSC+ G  + +    C 
Sbjct:   217 YNALFMILPTLTIAYFTGDAQKAMEYQ----GWADMLFIVQFTLSCVMGFILMYSTVLCT 272

Query:   279 RAISATGFTVLGIVNKLLTVVINLVIW-DKHSTWVGTVGLLICMLGGVMYQQSTSNKPKA 337
             +  SA   T++G +  +L   I +    D   TW+  +GL I + G ++Y   T  + + 
Sbjct:   273 QYNSALTTTIVGCIKNILITYIGMFFGGDYIFTWMNFIGLNISIAGSLVYSYITFTEEQL 332

Query:   338 VKETKA 343
              K+ +A
Sbjct:   333 SKQAEA 338

GO:0016021 "integral to membrane" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0015165 "pyrimidine nucleotide-sugar transmembrane transporter activity" evidence=IEA

GO:0030206 "chondroitin sulfate biosynthetic process" evidence=IEA

GO:0048706 "embryonic skeletal system development" evidence=IEA

ZFIN|ZDB-GENE-040426-1213 slc35d1b "solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1b" [Danio rerio (taxid:7955)]

 Score = 150 (57.9 bits), Expect = 5.9e-08, P = 5.9e-08
 Identities = 65/309 (21%), Positives = 122/309 (39%)

Query:    32 DTLAHQASVYGVAAGYCISASLLSIINKWAIMKFPYPGALTAL---QYFTSAAGVLLCGY 88
             DT A    ++  AA Y IS+ L+ ++NK  +  + +P +L AL   Q F +   +     
Sbjct:    27 DTSALYLKLFA-AAFYGISSFLIVVVNKSVLTNYRFPSSL-ALGIGQMFATVVVLRGAKA 84

Query:    89 FKFLEHDALELLTVWRFLPAAIIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETL 148
                +     +    ++  P  +++  +  T        N+  F V R    +F  + E  
Sbjct:    85 LNMISFPDFDWHVAYKVFPLPLLYVGNQLTGLFGTKQLNLPMFTVLRRFSILFTMLFEGY 144

Query:   149 FLHQPWP-SIKTWLSLATIFGGSVIYVLTDYQFTVMAYSWALAYLVSMTIDFVYIKHVVM 207
              L Q +  SIK   ++ T+  G+ +   +D  F +  Y +     +    +  Y+K  + 
Sbjct:   145 LLKQKFSWSIKA--TVFTMILGAFVAASSDLAFDLQGYVFITLNNILTAANGAYMKQKLD 202

Query:   208 TIGLNTWGXXXXXXXXXXXXXXXXXXXXXXXKK-IKHEMTTASDWYSFEVVLPVGLSCIF 266
             +  L  +G                       +K ++ E+     W  +  V+   LSC+ 
Sbjct:   203 SKELGKYGLLYYNALLMIIPTVVLAYFTGDVQKTLECEV-----WADYFFVIQFVLSCVM 257

Query:   267 GLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIW-DKHSTWVGTVGLLICMLGGV 325
             G  + +    C    SA   T++G +  +L   I +V   D   +W+  VGL I + G +
Sbjct:   258 GFILMYSIMLCTHYNSALTTTIVGCIKNILVTYIGMVFGGDYIFSWMNFVGLNISIAGSL 317

Query:   326 MYQQSTSNK 334
             +Y   T  K
Sbjct:   318 VYSYITFTK 326

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9S845	GONS3_ARATH	No assigned EC number	0.7956	0.9811	0.9811	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	372
COG5070	309	COG5070, VRG4, Nucleotide-sugar transporter [Carbo	9e-09
pfam08449	303	pfam08449, UAA, UAA transporter family	4e-07
TIGR00817	302	TIGR00817, tpt, Tpt phosphate/phosphoenolpyruvate	1e-06
PTZ00343	350	PTZ00343, PTZ00343, triose or hexose phosphate/pho	2e-05
pfam03151	149	pfam03151, TPT, Triose-phosphate Transporter famil	3e-05
COG0697	292	COG0697, RhaT, Permeases of the drug/metabolite tr	4e-04

>gnl|CDD|227402 COG5070, VRG4, Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

 Score = 55.7 bits (134), Expect = 9e-09
 Identities = 65/305 (21%), Positives = 131/305 (42%), Gaps = 18/305 (5%)

Query: 47  YCISASLLSIINKWAI--MKFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWR 104
           YC S+ L+++ NK+ +  + F     L A+Q      G+L+    KFL      L    +
Sbjct: 14  YCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLI---LKFLRLVEFRLTKAKK 70

Query: 105 FLPAAIIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLA 164
           + P + +  + ++T+S+ L +  V  + +F++   I +A GE LF      S+   LS  
Sbjct: 71  WFPISFLLVVMIYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSL-ELLSFI 129

Query: 165 TIFGGSVIYVLTDYQFTVMA-------YSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLV 217
            +   SV+    D Q +          Y W     +S     + ++  +       +  +
Sbjct: 130 LMVLSSVVATWGDQQASAFKAQILNPGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTM 189

Query: 218 LYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFFGFSC 277
            YNNL +L +      +  +           ++  S + ++ + +S +  + IS+    C
Sbjct: 190 FYNNLLSLPILLSFSFLFED-----WSPGNLANNLSVDSLMAMFISGLCSVGISYCSAWC 244

Query: 278 RRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQSTSNKPKA 337
            R  S+T ++++G +NKL   +  LV +D    ++    +L+  L G +Y  + S K + 
Sbjct: 245 VRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQQN 304

Query: 338 VKETK 342
            K+  
Sbjct: 305 QKDPA 309

Length = 309

>gnl|CDD|219846 pfam08449, UAA, UAA transporter family

 Score = 50.7 bits (122), Expect = 4e-07
 Identities = 60/318 (18%), Positives = 121/318 (38%), Gaps = 45/318 (14%)

Query: 42  GVAAGYCISASLLSIINKWAIMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALELLT 101
           G+  GYC +  L        IM   Y      L  F     + L G    L    L+   
Sbjct: 7   GIFGGYCSNGVLQE-----LIMTREYGSPFGNLLTFAQFLFISLVGLLYLLLFKKLKPRK 61

Query: 102 V--WRFLPAAIIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKT 159
           +    ++     F+LS   N+E L + +  T ++F+S   I V I   L   + + S++ 
Sbjct: 62  IPLKTYVLIVATFFLSSVLNNEALKYISYPTHVIFKSCKLIPVMILGILIYGKRYSSLQ- 120

Query: 160 WLSLATIFGGSVIYVLTDYQ----FTVMAYSWALAYLV-----------SMTIDFVYIKH 204
           +LS   I  G +I+ L   +      +  +S  +   +             T + +Y K+
Sbjct: 121 YLSALLITLGVIIFTLASAKDSKNSKLTTFSDNVGIALLFGALLMDALTGNTQEKLYKKY 180

Query: 205 VVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSC 264
                G ++  ++ Y++L +L  F L LL +        E        SF +  P  L  
Sbjct: 181 -----GKHSKEMMFYSHLLSLPFFLLGLLDIRTGLLFSAE--------SFCLRHPSVLFY 227

Query: 265 IFGLAISFFGFSCRRAISATG-------FTVLGIVNKLLTVVINLVIWDKHSTWVGTVGL 317
           +   +++   +  +  +            T++  + K ++++++++++    T    +G 
Sbjct: 228 LLLNSLT--QYVGQFFVFYLISEFGALTVTLVTTLRKFVSLLLSVLLFGNPLTLQQWLGT 285

Query: 318 LICMLGGVMYQQSTSNKP 335
           L+  LG  +Y      K 
Sbjct: 286 LLVFLGIFLYAYLKKKKA 303

This family includes transporters with a specificity for UDP-N-acetylglucosamine. Length = 303

>gnl|CDD|129898 TIGR00817, tpt, Tpt phosphate/phosphoenolpyruvate translocator

 Score = 49.0 bits (117), Expect = 1e-06
 Identities = 63/291 (21%), Positives = 111/291 (38%), Gaps = 17/291 (5%)

Query: 56  IINKWAIMKFPYPGALTALQYFTSAAGVLLC------GYFKFLEHDALELLTVWRFLPAA 109
           I NK  +  FPYP   T +       G L C      G  K L+  +  L  +   LP A
Sbjct: 19  IYNKKLLNVFPYPYFKTLISLAV---GSLYCLLSWSSGLPKRLKISSALLKLL---LPVA 72

Query: 110 IIFYL-SLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFG 168
           I+  +  + +N  L   A   T  + ++  P F  +    FL Q +PS   WLSL  I G
Sbjct: 73  IVHTIGHVTSNVSLSKVAVSFTHTI-KAMEPFFSVVLSAFFLGQEFPST-LWLSLLPIVG 130

Query: 169 GSVIYVLTDYQFTVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLF 228
           G  +   T+  F    +  A+   ++     ++ K  +    L+   L  Y ++ +L L 
Sbjct: 131 GVALASDTELSFNWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLL 190

Query: 229 PLELLIMGELKKIKHEMTTASDWYSFEVVLPVGL--SCIFGLAISFFGFSCRRAISATGF 286
                I      + H    A    +   +  V L  +  F        F     +S    
Sbjct: 191 SPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTH 250

Query: 287 TVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQSTSNKPKA 337
           +V   + +++ +V++++ +    +     G  I + G  +Y +  + KPK 
Sbjct: 251 SVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQKPKP 301

The 6-8 TMS Triose-phosphate Transporter (TPT) Family (TC 2.A.7.9)Functionally characterized members of the TPT family are derived from the inner envelope membranes of chloroplasts and nongreen plastids of plants. However,homologues are also present in yeast. Saccharomyces cerevisiae has three functionally uncharacterized TPT paralogues encoded within its genome. Under normal physiologicalconditions, chloroplast TPTs mediate a strict antiport of substrates, frequently exchanging an organic three carbon compound phosphate ester for inorganic phosphate (Pi).Normally, a triose-phosphate, 3-phosphoglycerate, or another phosphorylated C3 compound made in the chloroplast during photosynthesis, exits the organelle into thecytoplasm of the plant cell in exchange for Pi. However, experiments with reconstituted translocator in artificial membranes indicate that transport can also occur by achannel-like uniport mechanism with up to 10-fold higher transport rates. Channel opening may be induced by a membrane potential of large magnitude and/or by high substrateconcentrations. Nongreen plastid and chloroplast carriers, such as those from maize endosperm and root membranes, mediate transport of C3 compounds phosphorylated atcarbon atom 2, particularly phosphenolpyruvate, in exchange for Pi. These are the phosphoenolpyruvate:Pi antiporters (PPT). Glucose-6-P has also been shown to be asubstrate of some plastid translocators (GPT). The three types of proteins (TPT, PPT and GPT) are divergent in sequence as well as substrate specificity, but their substratespecificities overlap [Hypothetical proteins, Conserved]. Length = 302

>gnl|CDD|240371 PTZ00343, PTZ00343, triose or hexose phosphate/phosphate translocator; Provisional

 Score = 45.9 bits (109), Expect = 2e-05
 Identities = 46/208 (22%), Positives = 97/208 (46%), Gaps = 19/208 (9%)

Query: 133 VFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDYQFTVMAYSWALAYL 192
           V ++A P+F A+   LFL Q + ++  +LSL  I GG  +  + +  FT +A+  A+   
Sbjct: 145 VVKAAEPVFTALLSILFLKQ-FLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLSN 203

Query: 193 VSMTIDFVYIKHVVMT----IGLNTWGLVLYNNLEALL-----LFPLELLIMGELKKIKH 243
           +  ++  ++ K   M     IG N    +  +N+  LL     L  L L++  E KK   
Sbjct: 204 LGSSLRSIFAK-KTMKNKSEIGEN----LTASNIYMLLTLIASLISLPLVLFFEGKKWVP 258

Query: 244 EMTTA----SDWYSFEVVLPVGLSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVV 299
             T      +++    ++  +  S ++    +   F C   ++     V   + +++ +V
Sbjct: 259 VWTNYTANMTNYTKGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIV 318

Query: 300 INLVIWDKHSTWVGTVGLLICMLGGVMY 327
            +++I+    T +G +G+ + +LG ++Y
Sbjct: 319 SSIIIFQTQVTLLGYLGMAVAILGALLY 346

Length = 350

>gnl|CDD|217390 pfam03151, TPT, Triose-phosphate Transporter family

 Score = 43.3 bits (103), Expect = 3e-05
 Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 5/106 (4%)

Query: 224 ALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCI--FGLAISFFGFSCRRAI 281
            ++L P  LL     K  K  +    D  +   VL + LS +  F   +S FG   R   
Sbjct: 45  FIVLLPG-LLFSEGFKLGKFILKFFGDLKTSRYVLLLLLSGVLAFLYNLSAFGLLGR--T 101

Query: 282 SATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMY 327
           S    +V G V +++ +V++++I+    T++  +GL I +LG V+Y
Sbjct: 102 SPLTSSVAGTVKRVVVIVLSVIIFGDPVTFLNILGLAIAILGVVLY 147

This family includes transporters with a specificity for triose phosphate. Length = 149

>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

 Score = 41.4 bits (97), Expect = 4e-04
 Identities = 40/289 (13%), Positives = 98/289 (33%), Gaps = 20/289 (6%)

Query: 44  AAGYCISASLLSIINKWAIMKFPY----PGALTALQYFTSAAGVLLCGYFKFLEHDALEL 99
                +   LL  ++  A+              AL++  +A  +L     +         
Sbjct: 8   GLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLRPALR 67

Query: 100 LTVWRFLPAAIIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKT 159
             +   L A +   L        L + +     +    +P+F A+   L L     S+  
Sbjct: 68  PWLLLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQ 127

Query: 160 WLSLATIFGGSVIYVLTD---YQFTVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGL 216
            L +     G ++ +L        +++    ALA  +   +    +K +     +    L
Sbjct: 128 ILGILLALAGVLLILLGGGGGGILSLLGLLLALAAALLWALYTALVKRLSRLGPVTLALL 187

Query: 217 VLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFFGFS 276
           +        LL  L   + G                ++ ++L +G+    GLA   + ++
Sbjct: 188 LQLL---LALLLLLLFFLSGF--------GAPILSRAWLLLLYLGV-FSTGLAYLLWYYA 235

Query: 277 CRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGV 325
            R  + A+   +L ++  +   ++ +++  +  +    +G  + +LG +
Sbjct: 236 LRL-LGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVL 283

Length = 292

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	372
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	100.0
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	100.0
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	100.0
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	100.0
PLN00411	358	nodulin MtN21 family protein; Provisional	99.97
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.97
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.97
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.97
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.96
PRK11689	295	aromatic amino acid exporter; Provisional	99.95
PRK11272	292	putative DMT superfamily transporter inner membran	99.95
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.95
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.95
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.94
PRK15430	296	putative chloramphenical resistance permease RarD;	99.93
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.91
KOG1581	327	consensus UDP-galactose transporter related protei	99.88
KOG1580	337	consensus UDP-galactose transporter related protei	99.88
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.88
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.85
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.84
KOG1582	367	consensus UDP-galactose transporter related protei	99.84
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.83
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	99.77
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.74
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.74
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.72
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.72
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.69
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.69
COG2962	293	RarD Predicted permeases [General function predict	99.63
KOG2765	416	consensus Predicted membrane protein [Function unk	99.57
KOG2766	336	consensus Predicted membrane protein [Function unk	99.36
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	99.31
COG2510	140	Predicted membrane protein [Function unknown]	99.17
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.15
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.06
COG2510	140	Predicted membrane protein [Function unknown]	98.96
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	98.91
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.9
PRK15430	296	putative chloramphenical resistance permease RarD;	98.88
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.84
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	98.76
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.76
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.63
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.53
PLN00411	358	nodulin MtN21 family protein; Provisional	98.49
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	98.33
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.29
PRK11272	292	putative DMT superfamily transporter inner membran	98.16
COG2962	293	RarD Predicted permeases [General function predict	98.15
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.15
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.13
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.13
PRK11689	295	aromatic amino acid exporter; Provisional	98.1
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.08
PRK13499	345	rhamnose-proton symporter; Provisional	97.98
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	97.95
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	97.95
KOG2922	335	consensus Uncharacterized conserved protein [Funct	97.95
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	97.85
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	97.76
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.69
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.52
COG0697	292	RhaT Permeases of the drug/metabolite transporter	97.49
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.41
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.39
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	97.38
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	97.34
PRK13499	345	rhamnose-proton symporter; Provisional	97.23
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.22
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.11
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.04
COG2076	106	EmrE Membrane transporters of cations and cationic	97.01
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	96.96
PRK11431	105	multidrug efflux system protein; Provisional	96.96
PRK10650	109	multidrug efflux system protein MdtI; Provisional	96.89
COG2076	106	EmrE Membrane transporters of cations and cationic	96.87
PRK11431	105	multidrug efflux system protein; Provisional	96.84
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	96.83
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	96.81
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	96.8
PRK09541	110	emrE multidrug efflux protein; Reviewed	96.79
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	96.72
KOG4510	346	consensus Permease of the drug/metabolite transpor	96.46
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	96.23
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.14
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	95.51
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	95.48
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	95.28
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	94.73
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	94.7
KOG2765	416	consensus Predicted membrane protein [Function unk	94.39
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	94.34
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	92.64
KOG1581	327	consensus UDP-galactose transporter related protei	92.55
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	91.78
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	91.47
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	91.12
KOG1580	337	consensus UDP-galactose transporter related protei	91.04
KOG2922	335	consensus Uncharacterized conserved protein [Funct	89.5
PF05297	381	Herpes_LMP1: Herpesvirus latent membrane protein 1	89.41
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	86.26
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	85.74
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	82.37
PRK02237	109	hypothetical protein; Provisional	81.24
COG3169	116	Uncharacterized protein conserved in bacteria [Fun	80.6

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=100.00  E-value=3.4e-36  Score=283.62  Aligned_cols=292  Identities=20%  Similarity=0.303  Sum_probs=234.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHHHhhcCcccccccc--hhhhHHHHHHHHHHHHHH
Q 017423           39 SVYGVAAGYCISASLLSIINKWAIMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALE--LLTVWRFLPAAIIFYLSL  116 (372)
Q Consensus        39 ~~~~~~~~~~~~~~~~~~~~K~~l~~~~~p~~l~~~r~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  116 (372)
                      +....++.++..|+..++.||++++.+|+|++++++|++++.+++.+.+..+.++.++++  +++++.+++.|+++....
T Consensus        49 ~~~~~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~~~~~  128 (350)
T PTZ00343         49 KLALLFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCHLFVH  128 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            666677777777788999999999999999999999999998776655554444444443  347889999999988777


Q ss_pred             HHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeecccccchHHHHHHHHHHHHHH
Q 017423          117 FTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDYQFTVMAYSWALAYLVSMT  196 (372)
Q Consensus       117 ~~~~~al~~~~~~~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a  196 (372)
                      ...+.++++++++++++++++.|+++++++++++||| ++++++++++++++|+++++.++.++++.|++++++|+++++
T Consensus       129 ~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek-~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~~~~a  207 (350)
T PTZ00343        129 FGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQF-LNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLSNLGSS  207 (350)
T ss_pred             HHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCC-ccHHHHHHHHHHHHHHHheecccchhHHHHHHHHHHHHHHHH
Confidence            7778999999999999999999999999999999999 999999999999999999998888888899999999999999


Q ss_pred             HHHHHHHHHhhccC-----CCchhHHHHHhHHHH-HHHHHHHHHhhh-HHHHHHh-hhcccccchhHHHHHHHHHHHHHH
Q 017423          197 IDFVYIKHVVMTIG-----LNTWGLVLYNNLEAL-LLFPLELLIMGE-LKKIKHE-MTTASDWYSFEVVLPVGLSCIFGL  268 (372)
Q Consensus       197 ~~~i~~k~~~~~~~-----~~~~~~~~~~~~~~~-~~~~~~~~~~g~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  268 (372)
                      +|+++.|+.+++++     .++..+..|+.+.+. +++|.....++. ....+.. ......+.....+..++.+++..+
T Consensus       208 ~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~~s~l~~~  287 (350)
T PTZ00343        208 LRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIFFSGVWYY  287 (350)
T ss_pred             HHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHH
Confidence            99999999987643     455555555566664 445555433331 1111100 001111111223334566788888


Q ss_pred             HHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccc
Q 017423          269 AISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQST  331 (372)
Q Consensus       269 ~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~  331 (372)
                      ..+.+.|.++++++|.+.++.+++||++++++|++++||++|+.+++|.+++++|+++|++.|
T Consensus       288 l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~k  350 (350)
T PTZ00343        288 LYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLFK  350 (350)
T ss_pred             HHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhcC
Confidence            888888899999999999999999999999999999999999999999999999999998753

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=100.00  E-value=2.3e-36  Score=280.57  Aligned_cols=293  Identities=18%  Similarity=0.210  Sum_probs=232.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHHHhhcCcccccccchhhhHHHHHHHHHHHHHHHHH
Q 017423           40 VYGVAAGYCISASLLSIINKWAIMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIFYLSLFTN  119 (372)
Q Consensus        40 ~~~~~~~~~~~~~~~~~~~K~~l~~~~~p~~l~~~r~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (372)
                      ..+.++.|+..|+.++++||++++.+++|.+++++|++++.+.+.+.+..+.+++++.++++++.+++.|+++.....++
T Consensus         3 ~~~~~~~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~   82 (302)
T TIGR00817         3 TGLLFGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTIGHVTS   82 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            44667777788888999999999999999999999999988776655433334445677889999999999988889999


Q ss_pred             HHhhhccchhHHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeecccccchHHHHHHHHHHHHHHHHH
Q 017423          120 SELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDYQFTVMAYSWALAYLVSMTIDF  199 (372)
Q Consensus       120 ~~al~~~~~~~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~~  199 (372)
                      |.+++|+++++++++++++|+++++++++++||| ++++++.+++++++|+++....+.+++..|+++++++++++++|.
T Consensus        83 ~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~-~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~~  161 (302)
T TIGR00817        83 NVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQE-FPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFVSRN  161 (302)
T ss_pred             HHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCC-CcHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999 999999999999999998877677778889999999999999999


Q ss_pred             HHHHHHhhccCCCchhHHHHHhHHHH-HHHHHHHHHhhhHHHHHHhhhcc-cccchhHHHHHHHHHHH-HHHHHHHHHHH
Q 017423          200 VYIKHVVMTIGLNTWGLVLYNNLEAL-LLFPLELLIMGELKKIKHEMTTA-SDWYSFEVVLPVGLSCI-FGLAISFFGFS  276 (372)
Q Consensus       200 i~~k~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  276 (372)
                      ++.||..++.+.++.++..|+...+. .++|..... ++........... ..+.....+...+..+. .....+..++.
T Consensus       162 v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (302)
T TIGR00817       162 IFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFIT-EGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFM  240 (302)
T ss_pred             HHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHH-cchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999987445788999999988775 444554333 3222111100000 00111112222333333 23334445678


Q ss_pred             HhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccccCC
Q 017423          277 CRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQSTSNK  334 (372)
Q Consensus       277 ~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~~~~  334 (372)
                      +++++||++.+++++++|++++++|++++||++|+.+++|.+++++|+++|++.|.+|
T Consensus       241 ~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~~~  298 (302)
T TIGR00817       241 LLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQK  298 (302)
T ss_pred             HHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhccC
Confidence            9999999999999999999999999999999999999999999999999999877443

specificities overlap.

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=2e-36  Score=268.13  Aligned_cols=290  Identities=36%  Similarity=0.573  Sum_probs=266.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHccCCchHHHHH--HHHHHHHHHHHHHhhcCcccccccchhhhHHHHHHHHHHHHHHHHH
Q 017423           42 GVAAGYCISASLLSIINKWAIMKFPYPGALTA--LQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIFYLSLFTN  119 (372)
Q Consensus        42 ~~~~~~~~~~~~~~~~~K~~l~~~~~p~~l~~--~r~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (372)
                      ...+.||.+|+.++++||++++.++||..+..  .|++++.+.+.++...+..+.++++++..|+++|..+++.++++++
T Consensus        15 ~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~i~t~   94 (314)
T KOG1444|consen   15 LSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVGMLFTG   94 (314)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHHHHHHc
Confidence            66789999999999999999999999866655  9999999999999988999999999999999999999999999999


Q ss_pred             HHhhhccchhHHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeecccccchHHHHHHHHHHHHHHHHH
Q 017423          120 SELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDYQFTVMAYSWALAYLVSMTIDF  199 (372)
Q Consensus       120 ~~al~~~~~~~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~~  199 (372)
                      ..+++|+++++++++|+.+|+++++.+.+++|.+ +++..|.++..+.+|.......|.+++..|+.|++.++++.+.+.
T Consensus        95 ~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~-~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~~n~~~~a~~~  173 (314)
T KOG1444|consen   95 SKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKR-PSNKVWASVFAMIIGSVAAAFTDLSFNLRGYSWALANCLTTAAFV  173 (314)
T ss_pred             cccccccCchHHHHHhhchHHHHHHhHHhhcCcC-chhhHHHHHHHHHHHHHhhccccceecchhHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999987 999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 017423          200 VYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFFGFSCRR  279 (372)
Q Consensus       200 i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  279 (372)
                      ++.||..+..+.+.+++++|+++.+++.++...+++||+++..   .+.+.|....++..+..+|+++++++|+.++|.+
T Consensus       174 v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~---~~~~~~~~~~~~~~~~lScv~gf~isy~s~~ct~  250 (314)
T KOG1444|consen  174 VYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALS---LNFDNWSDSSVLVVMLLSCVMGFGISYTSFLCTR  250 (314)
T ss_pred             HHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHH---hhcccccchhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999888899999999999999988888888899988332   3345677777888999999999999999999999


Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccccCCC
Q 017423          280 AISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQSTSNKP  335 (372)
Q Consensus       280 ~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~~~~~  335 (372)
                      ..|+++.++++..+...+.+.+.+++|++.++.+.+|..+.+.|.++|++.+.+++
T Consensus       251 ~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k  306 (314)
T KOG1444|consen  251 VNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKK  306 (314)
T ss_pred             hccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhc
Confidence            99999999999777777777777778899999999999999999999999885443

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=100.00  E-value=1.5e-34  Score=262.37  Aligned_cols=290  Identities=21%  Similarity=0.366  Sum_probs=248.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHc--cCCchHHHHHHHHHHHHHHHHHHhhcCcccccccch-hhhHHHHHHHHHHHHH
Q 017423           39 SVYGVAAGYCISASLLSIINKWAIM--KFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALEL-LTVWRFLPAAIIFYLS  115 (372)
Q Consensus        39 ~~~~~~~~~~~~~~~~~~~~K~~l~--~~~~p~~l~~~r~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  115 (372)
                      .....+..++++++...+.||++++  +|++|.+++..|.+++.+...+.+..+..+.++.+. ..++.++|+++.+.++
T Consensus        17 ~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~~~~   96 (316)
T KOG1441|consen   17 RIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVFCIS   96 (316)
T ss_pred             HHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHHHHH
Confidence            4445566777778889999999999  899999999999999999999988888777666543 4788999999999999


Q ss_pred             HHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeecccccchHHHHHHHHHHHHH
Q 017423          116 LFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDYQFTVMAYSWALAYLVSM  195 (372)
Q Consensus       116 ~~~~~~al~~~~~~~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~  195 (372)
                      ..++|.++.++++++++++|+++|++++++++++.+|+ .++..+++++....|+++++..|.++++.|...++++.++.
T Consensus        97 ~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~-~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a~~s~~~~  175 (316)
T KOG1441|consen   97 HVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKT-YSSMTYLSLLPIVFGVAIASVTELSFNLFGFISAMISNLAF  175 (316)
T ss_pred             HHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCC-CcceEEEEEEEeeeeEEEeeeccccccHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999998 99999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhh--ccCCCchhHHHHHhHHHHH-HH-HHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHH
Q 017423          196 TIDFVYIKHVVM--TIGLNTWGLVLYNNLEALL-LF-PLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAIS  271 (372)
Q Consensus       196 a~~~i~~k~~~~--~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (372)
                      ++++++.|++++  +++.++.++++|+.+.+.. ++ |.....+++.. . .  .....|. ...+..+..+ ++++.+|
T Consensus       176 al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~-~-~--~~~~~~~-~~~~~~~~~s-v~~f~~N  249 (316)
T KOG1441|consen  176 ALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKF-V-G--FLTAPWF-VTFLILLLNS-VLAFLLN  249 (316)
T ss_pred             HHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccce-e-e--eeccccc-hhhHHHHHHH-HHHHHHH
Confidence            999999999984  5678999999999998743 34 44444444322 1 0  0111232 2233333334 9999999


Q ss_pred             HHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccccCCC
Q 017423          272 FFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQSTSNKP  335 (372)
Q Consensus       272 ~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~~~~~  335 (372)
                      .+.|++++++||.|.++.+.+|.++.++.|+++|++++|+.+..|+++.++|+++|++.|.+++
T Consensus       250 ls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~  313 (316)
T KOG1441|consen  250 LSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEK  313 (316)
T ss_pred             HHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhh
Confidence            9999999999999999999999999999999999999999999999999999999999885543

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.97  E-value=4.5e-29  Score=234.45  Aligned_cols=281  Identities=9%  Similarity=0.070  Sum_probs=201.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHc-cCCchHHHHHHHHHHHHHHHHHHhhc-Cc-ccccccchhhhHHHHHHHHHHHHH
Q 017423           39 SVYGVAAGYCISASLLSIINKWAIM-KFPYPGALTALQYFTSAAGVLLCGYF-KF-LEHDALELLTVWRFLPAAIIFYLS  115 (372)
Q Consensus        39 ~~~~~~~~~~~~~~~~~~~~K~~l~-~~~~p~~l~~~r~~~~~i~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~  115 (372)
                      +.+...+..-.+...+....|.+++ +.+ |..+.++|+.++.++++.+.+. ++ ++.++.+++++..+...+++....
T Consensus        13 ~~~~~~~~~q~~~~~~~~~~k~a~~~G~~-~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g~~~   91 (358)
T PLN00411         13 VFLTAMLATETSVVGISTLFKVATSKGLN-IYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLGSMY   91 (358)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHCCCC-ccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHHH
Confidence            4444333333344457778888885 566 8889999999888766554432 21 222334566667777777766434


Q ss_pred             HHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHH------cCCCCCCHhHHHHHHHHhhhhhheee-ccc----------
Q 017423          116 LFTNSELLLHANVDTFIVFRSAVPIFVAIGETLF------LHQPWPSIKTWLSLATIFGGSVIYVL-TDY----------  178 (372)
Q Consensus       116 ~~~~~~al~~~~~~~~~ii~~~~pi~v~~~~~l~------l~~~~~~~~~~~~~~~~~~Gv~l~~~-~~~----------  178 (372)
                      ..+.+.+++|++++.++++.++.|++++++++++      +||| .+++++.+++++++|++++.. ++.          
T Consensus        92 ~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er-~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~  170 (358)
T PLN00411         92 VITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKER-SSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPY  170 (358)
T ss_pred             HHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhccc-ccHHHHHHHHHHHHHHHHHHHccCccccccccccc
Confidence            4567889999999999999999999999999988      5898 999999999999999987542 111          


Q ss_pred             -------------ccc-hHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHH-HHHHHHHHHHHhhh-HHHHH
Q 017423          179 -------------QFT-VMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLE-ALLLFPLELLIMGE-LKKIK  242 (372)
Q Consensus       179 -------------~~~-~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~-~~~~~  242 (372)
                                   ..+ ..|+.++++++++|++|++++|+..++++. .....+++... ++++.++..+.+++ .... 
T Consensus       171 ~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~-~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~-  248 (358)
T PLN00411        171 LNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPA-AFTVSFLYTVCVSIVTSMIGLVVEKNNPSVW-  248 (358)
T ss_pred             ccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc-HhHHHHHHHHHHHHHHHHHHHHHccCCcccc-
Confidence                         112 349999999999999999999999877432 22334444333 34333333332221 1100 


Q ss_pred             HhhhcccccchhHHHHHHHHHHHHHHHHHHH-HHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHH
Q 017423          243 HEMTTASDWYSFEVVLPVGLSCIFGLAISFF-GFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICM  321 (372)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil  321 (372)
                           ...+ +.. ...++|.++++. ..|. +++++++.+|.+++++.+++|++++++|++++||++++.+++|.++|+
T Consensus       249 -----~~~~-~~~-~~~i~y~~i~t~-lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl  320 (358)
T PLN00411        249 -----IIHF-DIT-LITIVTMAIITS-VYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILIT  320 (358)
T ss_pred             -----eecc-chH-HHHHHHHHHHHH-HHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHH
Confidence                 0112 222 234667777654 4554 788999999999999999999999999999999999999999999999


Q ss_pred             Hhhhhhcccc
Q 017423          322 LGGVMYQQST  331 (372)
Q Consensus       322 ~g~~l~~~~~  331 (372)
                      +|+++..+.+
T Consensus       321 ~Gv~l~~~~~  330 (358)
T PLN00411        321 LGFYAVMWGK  330 (358)
T ss_pred             HHHHHHHhhh
Confidence            9999988755

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.97  E-value=5.6e-29  Score=217.56  Aligned_cols=295  Identities=17%  Similarity=0.212  Sum_probs=244.1

Q ss_pred             HHhHHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHHHhhc-Cccc---ccccchh-hhHHHHHH
Q 017423           34 LAHQASVYGVAAGYCISASLLSIINKWAIMKFPYPGALTALQYFTSAAGVLLCGYF-KFLE---HDALELL-TVWRFLPA  108 (372)
Q Consensus        34 ~~~~~~~~~~~~~~~~~~~~~~~~~K~~l~~~~~p~~l~~~r~~~~~i~~~~~~~~-~~~~---~~~~~~~-~~~~~~~~  108 (372)
                      .+++....+++..|+++|+...+++|+.-.+|++|.+++..|+++-..+....... +...   +..++|+ ..|+..|.
T Consensus        11 ~~~rV~~L~lVl~yY~~Si~Ltf~~~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPt   90 (349)
T KOG1443|consen   11 LMNRVLTLALVLLYYFLSIGLTFYFKWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPT   90 (349)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhh
Confidence            45555777888888888999999999999999999999999998887766554432 2211   2246775 57788899


Q ss_pred             HHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeecccccchHHHHHH
Q 017423          109 AIIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDYQFTVMAYSWA  188 (372)
Q Consensus       109 ~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~~~~~~~G~~~~  188 (372)
                      ++...+.+.++|++++|++.+++++.|+.+++|+.+++..+-=|| .++.-.+.++++.+|+++.++.+.+++..|+.++
T Consensus        91 alata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk-~~w~L~l~v~lI~~Glflft~KsTqf~i~Gf~lv  169 (349)
T KOG1443|consen   91 ALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEK-FRWALVLIVLLIAVGLFLFTYKSTQFNIEGFFLV  169 (349)
T ss_pred             hhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHH-HHHHHHHHHHHHhhheeEEEecccceeehhHHHH
Confidence            999999999999999999999999999999999999995543365 8999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhccC---CCchhHHHHHhHH-HHHHHHHHHHHhhhHHHHHHhhhcccccc-hhHHHHHHHHH
Q 017423          189 LAYLVSMTIDFVYIKHVVMTIG---LNTWGLVLYNNLE-ALLLFPLELLIMGELKKIKHEMTTASDWY-SFEVVLPVGLS  263 (372)
Q Consensus       189 l~a~~~~a~~~i~~k~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~  263 (372)
                      +.++++.+++..+.|.++++.+   .+|.+.+++..+. ++.++|..++++|......+...+..+.. .......+...
T Consensus       170 ~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l~  249 (349)
T KOG1443|consen  170 LAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISLG  249 (349)
T ss_pred             HHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHHH
Confidence            9999999999999999998754   5788888877664 56777888888886544433222222221 22334456678


Q ss_pred             HHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcc
Q 017423          264 CIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQ  329 (372)
Q Consensus       264 ~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~  329 (372)
                      |..++...++.+..+.+++..+.++++.++.+.+.+++..+.+|.++..+|+|..++..|+.++..
T Consensus       250 g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~~  315 (349)
T KOG1443|consen  250 GLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHRN  315 (349)
T ss_pred             HHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhcc
Confidence            888899998899999999999999999999999999999999999999999999999999999944

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.97  E-value=1.4e-29  Score=211.39  Aligned_cols=284  Identities=21%  Similarity=0.390  Sum_probs=242.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHc--cCCchHHHHHHHHHHHHHHHHHHhhcCcccccccchhhhHHHHHHHHHHHHHHHHHH
Q 017423           43 VAAGYCISASLLSIINKWAIM--KFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIFYLSLFTNS  120 (372)
Q Consensus        43 ~~~~~~~~~~~~~~~~K~~l~--~~~~p~~l~~~r~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (372)
                      .++.||++++.|++.||++++  +|+..+.+.+.|..+..+.++++.+.+..+.   +.++.+.|+|.+++...+++.+.
T Consensus        10 ~~lsYc~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~f---R~t~aK~WfpiSfLLv~MIyt~S   86 (309)
T COG5070          10 ASLSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEF---RLTKAKKWFPISFLLVVMIYTSS   86 (309)
T ss_pred             HHHHHHHHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhhe---ehhhhhhhcCHHHHHHHHHHhcc
Confidence            457899999999999999996  5666788889999888877777766554433   35688999999999999999999


Q ss_pred             HhhhccchhHHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeeccccc-------chHHHHHHHHHHH
Q 017423          121 ELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDYQF-------TVMAYSWALAYLV  193 (372)
Q Consensus       121 ~al~~~~~~~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~~~~-------~~~G~~~~l~a~~  193 (372)
                      .+++|++++.+++.|+++.+.++..+.+++|.| .+..+..+.++++.......++|.+-       -..|++|+..+++
T Consensus        87 KsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~-vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN~GY~Wm~~Ncl  165 (309)
T COG5070          87 KSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGR-VTSLELLSFILMVLSSVVATWGDQQASAFKAQILNPGYLWMFTNCL  165 (309)
T ss_pred             cceeeeeeeHHHHhccceeehhHhhHHHHhcCc-cchhhHHHHHHHHHHHHHhccchhhHHHHHhcccCCceEEEehhhH
Confidence            999999999999999999999999999999999 89999999999999999999888632       1259999999999


Q ss_pred             HHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHHH
Q 017423          194 SMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFF  273 (372)
Q Consensus       194 ~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (372)
                      +.+++....|+..+-.+...++.++|+++++++++....+.++|+++-     +...-.+......+..+|++.+.+.|+
T Consensus       166 ssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~-----n~annl~~d~l~am~ISgl~svgiSy~  240 (309)
T COG5070         166 SSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPG-----NLANNLSVDSLMAMFISGLCSVGISYC  240 (309)
T ss_pred             hHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcc-----hhhcCCChHHHHHHHHHHHHHhhhhhc
Confidence            999999999998876678889999999999987776666666665432     001111233455688999999999999


Q ss_pred             HHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccccCCC
Q 017423          274 GFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQSTSNKP  335 (372)
Q Consensus       274 ~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~~~~~  335 (372)
                      .-||++.++.++.++++.+++....+.|.++||++.+...+..+.+-..+.++|...+.+|+
T Consensus       241 saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~  302 (309)
T COG5070         241 SAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQ  302 (309)
T ss_pred             cceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999988775433

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.97  E-value=3.3e-27  Score=218.99  Aligned_cols=272  Identities=22%  Similarity=0.311  Sum_probs=222.3

Q ss_pred             HHHHHHHH-ccC--CchHHHHHHHHHHHHHHHHHHhhcCcccccccchhhhHHHHHHHHHHHHHHHHHHHhhhccchhHH
Q 017423           55 SIINKWAI-MKF--PYPGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIFYLSLFTNSELLLHANVDTF  131 (372)
Q Consensus        55 ~~~~K~~l-~~~--~~p~~l~~~r~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~  131 (372)
                      .+.++.+. ...  ++|.++++.|+....+..........  .++.++..++++++.++++.++..++|.+++|+|.|+.
T Consensus        16 g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~i~~p~~   93 (303)
T PF08449_consen   16 GILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFK--FPKSRKIPLKKYAILSFLFFLASVLSNAALKYISYPTQ   93 (303)
T ss_pred             HHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcc--ccCCCcChHHHHHHHHHHHHHHHHHHHHHHHhCChHHH
Confidence            34444455 333  35999999999888876655444322  12224456788899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeecccc----c------chHHHHHHHHHHHHHHHHHHH
Q 017423          132 IVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDYQ----F------TVMAYSWALAYLVSMTIDFVY  201 (372)
Q Consensus       132 ~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~~~----~------~~~G~~~~l~a~~~~a~~~i~  201 (372)
                      +++|++.|+++++++++++||| ++++++.++++.++|+++...+|.+    .      ...|+++++++.++++++.++
T Consensus        94 ~~~ks~~~i~vmi~~~l~~~k~-y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~~~  172 (303)
T PF08449_consen   94 IVFKSSKPIPVMILGVLILGKR-YSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFTGVY  172 (303)
T ss_pred             HHHhhhHHHHHHHHHHHhcCcc-ccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999998 9999999999999999998765421    1      123999999999999999999


Q ss_pred             HHHHhhccCCCchhHHHHHhHHHHHHHHHHHHH--hhhHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 017423          202 IKHVVMTIGLNTWGLVLYNNLEALLLFPLELLI--MGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFFGFSCRR  279 (372)
Q Consensus       202 ~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  279 (372)
                      ++|+.++++.+++++++|+++.++++..+....  .+|+.+..+...    . .+..+..++..++.+...+...+.+++
T Consensus       173 qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~----~-~p~~~~~l~~~s~~~~~g~~~i~~~~~  247 (303)
T PF08449_consen  173 QEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFIS----A-HPSVLLYLLLFSLTGALGQFFIFYLIK  247 (303)
T ss_pred             HHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHH----H-hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999987776666555  566665543321    1 222455566677777777777778899


Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccccCC
Q 017423          280 AISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQSTSNK  334 (372)
Q Consensus       280 ~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~~~~  334 (372)
                      +.||.+.+++.++++++++++|+++|++++++.+|+|+++++.|..+|.+.|+|+
T Consensus       248 ~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~  302 (303)
T PF08449_consen  248 KFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK  302 (303)
T ss_pred             hcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence            9999999999999999999999999999999999999999999999999988443

; GO: 0055085 transmembrane transport

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.96  E-value=2.4e-30  Score=222.44  Aligned_cols=290  Identities=19%  Similarity=0.267  Sum_probs=255.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHcc----CCchHHHHHHHHHHHHHHHHHHhhc-----Cccccc--ccchhhhHHHHH
Q 017423           39 SVYGVAAGYCISASLLSIINKWAIMK----FPYPGALTALQYFTSAAGVLLCGYF-----KFLEHD--ALELLTVWRFLP  107 (372)
Q Consensus        39 ~~~~~~~~~~~~~~~~~~~~K~~l~~----~~~p~~l~~~r~~~~~i~~~~~~~~-----~~~~~~--~~~~~~~~~~~~  107 (372)
                      .+-..+..||.+++.+.+.||++++.    .+.|.+.++.|+++...++..+...     ++...+  +++.+..+++.|
T Consensus        28 ~v~~~vs~ywv~SI~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlp  107 (347)
T KOG1442|consen   28 QVDSAVSLYWVTSIGLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLP  107 (347)
T ss_pred             chhhhccceeeeeehhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcc
Confidence            44455688999999999999999974    5669999999999888777665432     222222  356678899999


Q ss_pred             HHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeecc---cccchHH
Q 017423          108 AAIIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTD---YQFTVMA  184 (372)
Q Consensus       108 ~~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~---~~~~~~G  184 (372)
                      +++++.+++.++|.+|+|.+++++.+-|+++.+|++++.++++|+| .+....++++++++|..+-...+   ...++.|
T Consensus       108 lsvVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqk-Ts~~~~~~C~lIi~GF~lGvdqE~~~~~ls~~G  186 (347)
T KOG1442|consen  108 LSVVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQK-TSFFALGCCLLIILGFGLGVDQEGSTGTLSWIG  186 (347)
T ss_pred             hhheeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccc-cccccceeehhheehheeccccccccCccchhh
Confidence            9999999999999999999999999999999999999999999999 89899999999999988877655   4578899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHHH
Q 017423          185 YSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSC  264 (372)
Q Consensus       185 ~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (372)
                      .+++..++++.|+-.++.||.....+...|.+.+|+++.+++++.+.+.+.||++.+..    +++..+..+|..+..+|
T Consensus       187 vifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~----~~~l~a~~Fw~~mtLsg  262 (347)
T KOG1442|consen  187 VIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVG----FPHLPAIKFWILMTLSG  262 (347)
T ss_pred             hHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcC----cccchHHHHHHHHHHHH
Confidence            99999999999999999999988878889999999999998887788888999988843    33444667899999999


Q ss_pred             HHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccccC
Q 017423          265 IFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQSTSN  333 (372)
Q Consensus       265 ~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~~~  333 (372)
                      ++++.++|...+-+|.+||.|..+-++.|...-+++++.+++|..+..=|-|-++++.|...|.+.|++
T Consensus       263 lfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~  331 (347)
T KOG1442|consen  263 LFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEH  331 (347)
T ss_pred             HHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999999999999999988743

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.95  E-value=1.3e-25  Score=207.52  Aligned_cols=255  Identities=13%  Similarity=0.049  Sum_probs=183.7

Q ss_pred             HHHHHHHHHccCCchHHHHHHHHHHHHHHHHHHhhcCcccccccchhhhHHHHHHHHHHHHHHHHHHHhhh----ccchh
Q 017423           54 LSIINKWAIMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIFYLSLFTNSELLL----HANVD  129 (372)
Q Consensus        54 ~~~~~K~~l~~~~~p~~l~~~r~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~----~~~~~  129 (372)
                      .....|..++.+| |..+.++|+.++.+++..+.  +.   ++.++++++.....++.+.....+.+.+++    ++++.
T Consensus        19 ~~~~~k~~~~~~~-P~~~~~~R~~~a~l~l~~~~--~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~a~~~~~~~~~a~   92 (295)
T PRK11689         19 MVGLIRGVSESLG-PVGGAAMIYSVSGLLLLLTV--GF---PRLRQFPKRYLLAGGLLFVSYEICLALSLGYANTRRQAI   92 (295)
T ss_pred             HHHHHHHHHccCC-hHHHHHHHHHHHHHHHHHHc--cc---cccccccHHHHHHHhHHHHHHHHHHHHHHHHhhccccch
Confidence            4788999999999 99999999998887665432  11   111212223333333333333444455553    56788


Q ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeeccc-----------ccchHHHHHHHHHHHHHHHH
Q 017423          130 TFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDY-----------QFTVMAYSWALAYLVSMTID  198 (372)
Q Consensus       130 ~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~~-----------~~~~~G~~~~l~a~~~~a~~  198 (372)
                      .+.++.++.|+++.+++++++||| ++++++.++++++.|++++..++.           +.+..|+++++++++|||+|
T Consensus        93 ~a~~l~~~~Pi~~~ll~~~~~~e~-~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~A~~  171 (295)
T PRK11689         93 EVGMVNYLWPSLTILFAVLFNGQK-ANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLSYGLAFIGAFIWAAY  171 (295)
T ss_pred             HHHHHHHHhHHHHHHHHHHHhcCC-ccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHHHHHHHHHHHHHHHH
Confidence            889999999999999999999998 999999999999999998765432           12346999999999999999


Q ss_pred             HHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHHH-HHHH
Q 017423          199 FVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFF-GFSC  277 (372)
Q Consensus       199 ~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  277 (372)
                      +++.||..++  .++....  ....++.+.+.. ...++..         ..+ +...|..+.+.++ .+...|. ++++
T Consensus       172 ~v~~k~~~~~--~~~~~~~--~~~~~~~l~~~~-~~~~~~~---------~~~-~~~~~~~l~~~~~-~t~~~~~l~~~a  235 (295)
T PRK11689        172 CNVTRKYARG--KNGITLF--FILTALALWIKY-FLSPQPA---------MVF-SLPAIIKLLLAAA-AMGFGYAAWNVG  235 (295)
T ss_pred             HHHHhhccCC--CCchhHH--HHHHHHHHHHHH-HHhcCcc---------ccC-CHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence            9999998655  3444332  222222222222 2222110         112 2234555667675 4555665 7899


Q ss_pred             hcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccc
Q 017423          278 RRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQST  331 (372)
Q Consensus       278 i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~  331 (372)
                      +|+.+|.+.+.+.+++|++++++|++++||++++.+++|+++|+.|+++....+
T Consensus       236 l~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~  289 (295)
T PRK11689        236 ILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLAT  289 (295)
T ss_pred             HHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhH
Confidence            999999999999999999999999999999999999999999999998776544

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.95  E-value=4e-25  Score=204.10  Aligned_cols=260  Identities=13%  Similarity=0.109  Sum_probs=198.2

Q ss_pred             HHHHHHHHHccCCchHHHHHHHHHHHHHHHHHHhhcCcccccccchhhhHHHHHHHHHHH-HHHHHHHHhh-hccchhHH
Q 017423           54 LSIINKWAIMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIFY-LSLFTNSELL-LHANVDTF  131 (372)
Q Consensus        54 ~~~~~K~~l~~~~~p~~l~~~r~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~al-~~~~~~~~  131 (372)
                      .....|...++.+ |..++++|++++.++++.....+.++  ..++++++.....|.+.. ....+.+.+. ++++++.+
T Consensus        23 ~~~~~K~~~~~~~-p~~~~~~R~~~a~l~ll~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a   99 (292)
T PRK11272         23 TYLVIRIGVESWP-PLMMAGVRFLIAGILLLAFLLLRGHP--LPTLRQWLNAALIGLLLLAVGNGMVTVAEHQNVPSGIA   99 (292)
T ss_pred             HHHHHHHHhccCC-HHHHHHHHHHHHHHHHHHHHHHhCCC--CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHH
Confidence            5788899998888 99999999998887765544332222  224456666666666543 3355666777 99999999


Q ss_pred             HHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeec-ccccchHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 017423          132 IVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLT-DYQFTVMAYSWALAYLVSMTIDFVYIKHVVMTIG  210 (372)
Q Consensus       132 ~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~-~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~  210 (372)
                      +++.++.|+++++++.+ +||| ++++++.+++++++|+.+...+ +.+.+..|++++++++++||.|.++.||..++  
T Consensus       100 ~~l~~~~Pl~~~lla~~-~~e~-~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~--  175 (292)
T PRK11272        100 AVVVATVPLFTLCFSRL-FGIR-TRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGAILILIASASWAFGSVWSSRLPLP--  175 (292)
T ss_pred             HHHHHHHHHHHHHHHHH-hccc-CchhHHHHHHHHHHhHHHHhcCcccccchHHHHHHHHHHHHHHHHHHHHHhcCCC--
Confidence            99999999999999975 6988 9999999999999999887543 33455679999999999999999999997533  


Q ss_pred             CCchhHHHHHhHHH-HHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHHH-HHHHhcccchhHHHH
Q 017423          211 LNTWGLVLYNNLEA-LLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFF-GFSCRRAISATGFTV  288 (372)
Q Consensus       211 ~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~a~~~s~  288 (372)
                       ++.....++...+ ..+.+... ..++..         ....+...|..+++.+++++...+. +++++++.++.+.++
T Consensus       176 -~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---------~~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~  244 (292)
T PRK11272        176 -VGMMAGAAEMLAAGVVLLIASL-LSGERL---------TALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATS  244 (292)
T ss_pred             -cchHHHHHHHHHHHHHHHHHHH-HcCCcc---------cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHH
Confidence             2233444555444 33333322 222100         0111234566788889998888886 778999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccc
Q 017423          289 LGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQST  331 (372)
Q Consensus       289 ~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~  331 (372)
                      +.+++|+++.++|++++||++++.+++|.++++.|+++.++.+
T Consensus       245 ~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~  287 (292)
T PRK11272        245 YAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGK  287 (292)
T ss_pred             HHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999887654

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.95  E-value=7.2e-25  Score=202.47  Aligned_cols=256  Identities=10%  Similarity=0.024  Sum_probs=191.9

Q ss_pred             HHHHHHHHHccCCchHHHHHHHHHHHHHHHHHHhhcCcccccccchhhhHHHHHHHHHHHHHHHHHHHhhhccchhHHHH
Q 017423           54 LSIINKWAIMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIFYLSLFTNSELLLHANVDTFIV  133 (372)
Q Consensus        54 ~~~~~K~~l~~~~~p~~l~~~r~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~i  133 (372)
                      .....|+.++.++ |..+.++|++++.++++.....+   .++.++++++.....|+.......+.+.+++|+|++.+++
T Consensus        27 ~~~~~K~~~~~~~-~~~~~~~R~~~a~l~l~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~  102 (293)
T PRK10532         27 GASLAKSLFPLVG-APGVTALRLALGTLILIAIFKPW---RLRFAKEQRLPLLFYGVSLGGMNYLFYLSIQTVPLGIAVA  102 (293)
T ss_pred             hHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHhHH---hccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHH
Confidence            4668999999888 99999999999987665543221   1233556777777777776666777888999999999999


Q ss_pred             HHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeecc---cccchHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 017423          134 FRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTD---YQFTVMAYSWALAYLVSMTIDFVYIKHVVMTIG  210 (372)
Q Consensus       134 i~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~---~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~  210 (372)
                      +..+.|+++++++    +|| +.+  ...+.+++.|+.++...+   .+.+..|++++++++++|++|.++.||..++  
T Consensus       103 l~~t~Pi~~~ll~----~~~-~~~--~~~~~i~~~Gv~li~~~~~~~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~--  173 (293)
T PRK10532        103 LEFTGPLAVALFS----SRR-PVD--FVWVVLAVLGLWFLLPLGQDVSHVDLTGAALALGAGACWAIYILSGQRAGAE--  173 (293)
T ss_pred             HHHHHHHHHHHHh----cCC-hHH--HHHHHHHHHHHheeeecCCCcccCChHHHHHHHHHHHHHHHHHHHHHHHhcc--
Confidence            9999999999776    354 433  445677789988765322   2345679999999999999999999998765  


Q ss_pred             CCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHHH-HHHHhcccchhHHHHH
Q 017423          211 LNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFF-GFSCRRAISATGFTVL  289 (372)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~a~~~s~~  289 (372)
                      .++....++....++++.|... ..+.  .        ..+ +...|..+++.|++++.++|. +++++++.++.+.+++
T Consensus       174 ~~~~~~~~~~~~~~~~l~~~~~-~~~~--~--------~~~-~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~  241 (293)
T PRK10532        174 HGPATVAIGSLIAALIFVPIGA-LQAG--E--------ALW-HWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTL  241 (293)
T ss_pred             CCchHHHHHHHHHHHHHHHHHH-HccC--c--------ccC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHH
Confidence            4455444333333333333332 2111  0        011 223455567899999999996 7899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccccCC
Q 017423          290 GIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQSTSNK  334 (372)
Q Consensus       290 ~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~~~~  334 (372)
                      .+++|++++++|++++||++++.+++|.++++.|++.+.+..+++
T Consensus       242 ~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~~  286 (293)
T PRK10532        242 MSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRRE  286 (293)
T ss_pred             HHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCCC
Confidence            999999999999999999999999999999999999987665443

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.95  E-value=1.1e-24  Score=201.91  Aligned_cols=263  Identities=11%  Similarity=0.117  Sum_probs=190.7

Q ss_pred             HHHHHHHHHccCCchHHHHHHHHHHHHHHHHHHhhcCcccccccchhhhHHHHHHHHHHHH-HHHHHHHhhhc-cchhHH
Q 017423           54 LSIINKWAIMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIFYL-SLFTNSELLLH-ANVDTF  131 (372)
Q Consensus        54 ~~~~~K~~l~~~~~p~~l~~~r~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~al~~-~~~~~~  131 (372)
                      .....|..+++++ |..+.++|+.++.+.++.... + +   +.+   ++.....++.... ...+.+.+++| .+++.+
T Consensus        19 ~~~~~k~~~~~~~-p~~~~~~R~~~a~~~l~~~~~-~-~---~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a   89 (299)
T PRK11453         19 NFVVIKVGLHNMP-PLMLAGLRFMLVAFPAIFFVA-R-P---KVP---LNLLLGYGLTISFGQFAFLFCAINFGMPAGLA   89 (299)
T ss_pred             hHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHHHhc-C-C---CCc---hHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHH
Confidence            4678899998888 999999999887654433221 1 1   112   2233334443322 23345667777 688999


Q ss_pred             HHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeecc---cccchHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017423          132 IVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTD---YQFTVMAYSWALAYLVSMTIDFVYIKHVVMT  208 (372)
Q Consensus       132 ~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~---~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~  208 (372)
                      .++.++.|+++.+++++++||| ++++++++++++++|+.++..++   .+.+..|+++++.++++|++|.+++||..++
T Consensus        90 ~~l~~~~pi~~~ll~~~~l~e~-~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~  168 (299)
T PRK11453         90 SLVLQAQAFFTIVLGAFTFGER-LQGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLAAAFSWACGNIFNKKIMSH  168 (299)
T ss_pred             HHHHHhHHHHHHHHHHHHhcCc-CcHHHHHHHHHHHHhHHHhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            9999999999999999999998 99999999999999999876542   2234579999999999999999999998654


Q ss_pred             cC-CCchhHHHHHhHHHH-HHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHHH-HHHHhcccchhH
Q 017423          209 IG-LNTWGLVLYNNLEAL-LLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFF-GFSCRRAISATG  285 (372)
Q Consensus       209 ~~-~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~a~~  285 (372)
                      .+ ........++...+. ++.......+++.. ...   +...+ +...|..+++.+++++..+|. +++++++.++.+
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~-~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~  243 (299)
T PRK11453        169 STRPAVMSLVVWSALIPIIPFFVASLILDGSAT-MIH---SLVTI-DMTTILSLMYLAFVATIVGYGIWGTLLGRYETWR  243 (299)
T ss_pred             cCccchhHHHHHHHHHHHHHHHHHHHHhcCchh-hhh---hhccC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH
Confidence            32 112222333333322 12222222222211 100   00112 334577889999999999997 678899999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccc
Q 017423          286 FTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQST  331 (372)
Q Consensus       286 ~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~  331 (372)
                      .+.+.+++|++++++|++++||++++.+++|.++++.|+++..+.+
T Consensus       244 ~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~  289 (299)
T PRK11453        244 VAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGL  289 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcch
Confidence            9999999999999999999999999999999999999999876655

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.94  E-value=2.2e-24  Score=196.01  Aligned_cols=254  Identities=12%  Similarity=0.059  Sum_probs=195.6

Q ss_pred             HHHHHHHHHccCCchHHHHHHHHHHHHHHHHHHhhcCcccccccchhhhHHHHHHHHH-HHHHHHHHHHhhhccchhHHH
Q 017423           54 LSIINKWAIMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAII-FYLSLFTNSELLLHANVDTFI  132 (372)
Q Consensus        54 ~~~~~K~~l~~~~~p~~l~~~r~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~~~~~~~~  132 (372)
                      ..+..|+.+++...|..+.++|++++.+++......+      .++++++.....+.+ ......+.+.+++|++++.++
T Consensus         4 ~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~   77 (260)
T TIGR00950         4 TGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAA   77 (260)
T ss_pred             hHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhH
Confidence            3577899987655488999999988877665544332      133455555555554 445577788999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeecc-cccchHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 017423          133 VFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTD-YQFTVMAYSWALAYLVSMTIDFVYIKHVVMTIGL  211 (372)
Q Consensus       133 ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~-~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~  211 (372)
                      ++.++.|+++++++.+++||| ++++++.++++++.|+.++...+ .+.+..|+.++++++++|+.+.++.|+..++.+.
T Consensus        78 ii~~~~P~~~~~~~~l~~~e~-~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~  156 (260)
T TIGR00950        78 LLLYLAPLYVTLLSDLMGKER-PRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKRLVKKEGP  156 (260)
T ss_pred             HHHhhhHHHHHHHHHHHccCC-CcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCc
Confidence            999999999999999999998 99999999999999998875443 4456689999999999999999999999876444


Q ss_pred             CchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHHH-HHHHhcccchhHHHHHH
Q 017423          212 NTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFF-GFSCRRAISATGFTVLG  290 (372)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~a~~~s~~~  290 (372)
                      ++.....+....+.++..+..+..++.          ..+ +...|..+.+.+++++..++. +++++++.++.+.+.+.
T Consensus       157 ~~~~~~~~~~~~~~~~l~~~~~~~~~~----------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~  225 (260)
T TIGR00950       157 ELLQFTGWVLLLGALLLLPFAWFLGPN----------PQA-LSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILA  225 (260)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcCCC----------CCc-chHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHH
Confidence            444444344545433333332222221          011 223455677888888877776 77899999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhh
Q 017423          291 IVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGV  325 (372)
Q Consensus       291 ~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~  325 (372)
                      +++|+++++++++++||+++..+++|.++++.|+.
T Consensus       226 ~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~  260 (260)
T TIGR00950       226 LAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL  260 (260)
T ss_pred             HHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence            99999999999999999999999999999999863

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.93  E-value=6.9e-23  Score=189.53  Aligned_cols=259  Identities=8%  Similarity=-0.025  Sum_probs=174.9

Q ss_pred             HHHHHHHHHccCCchHHHHHHHHHHHHHHHHHHhhcCccccc---cc-chhhhHHHHHHHHHHHHHHHHHHHhhhccchh
Q 017423           54 LSIINKWAIMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHD---AL-ELLTVWRFLPAAIIFYLSLFTNSELLLHANVD  129 (372)
Q Consensus        54 ~~~~~K~~l~~~~~p~~l~~~r~~~~~i~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~  129 (372)
                      .....|.. .+++ |..+.++|++++.+.++.....+.+...   .. +++++......++.......+.+.+++++|++
T Consensus        23 ~~~~~k~~-~~~~-~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~  100 (296)
T PRK15430         23 APAYFKLI-YYVP-ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHML  100 (296)
T ss_pred             HHHHHHHh-cCCC-HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHhcCchH
Confidence            45666875 5677 9999999999988755544332211110   01 22222222233334445578889999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeecccccchHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 017423          130 TFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDYQFTVMAYSWALAYLVSMTIDFVYIKHVVMTI  209 (372)
Q Consensus       130 ~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~  209 (372)
                      .++++.++.|+++++++++++||| ++++++.++++++.|++++...+.+.    ..++++++++|++|.++.||..++.
T Consensus       101 ~a~~l~~~~Pi~v~l~~~~~l~E~-~~~~~~~g~~l~~~Gv~li~~~~~~~----~~~~l~aa~~~a~~~i~~r~~~~~~  175 (296)
T PRK15430        101 EASLGYFINPLVNIVLGMIFLGER-FRRMQWLAVILAICGVLVQLWTFGSL----PIIALGLAFSFAFYGLVRKKIAVEA  175 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCC-CcHHHHHHHHHHHHHHHHHHHHcCCc----cHHHHHHHHHHHHHHHHHHhcCCCC
Confidence            999999999999999999999999 99999999999999999875432222    2467889999999999999864321


Q ss_pred             CCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHH
Q 017423          210 GLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFFGFSCRRAISATGFTVL  289 (372)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~  289 (372)
                      ..+......++.+.+.+..  ........       .. ........+..+.+.++.+.+..+++++++++.+|.+.+.+
T Consensus       176 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~-------~~-~~~~~~~~~~~~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~  245 (296)
T PRK15430        176 QTGMLIETMWLLPVAAIYL--FAIADSST-------SH-MGQNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLSTLGFF  245 (296)
T ss_pred             chhHHHHHHHHHHHHHHHH--HHHccCCc-------cc-ccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence            1112222223332222110  00000000       00 01111112333444565544444457889999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcc
Q 017423          290 GIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQ  329 (372)
Q Consensus       290 ~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~  329 (372)
                      .+++|++++++|++++||++++.+++|+++++.|+.+...
T Consensus       246 ~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~  285 (296)
T PRK15430        246 QYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVM  285 (296)
T ss_pred             HHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999888776543

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.91  E-value=9.1e-22  Score=181.34  Aligned_cols=277  Identities=16%  Similarity=0.166  Sum_probs=195.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHH-ccCCchHHHHHHHHHHHHHHHHHHhhcCcc--cccccchhhhHHHHHHHHHHHHHHHH
Q 017423           42 GVAAGYCISASLLSIINKWAI-MKFPYPGALTALQYFTSAAGVLLCGYFKFL--EHDALELLTVWRFLPAAIIFYLSLFT  118 (372)
Q Consensus        42 ~~~~~~~~~~~~~~~~~K~~l-~~~~~p~~l~~~r~~~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (372)
                      +-++..+.++.  ...+...- .+.+.|.+-++..++.-.+........+..  +..+..++++++.+.++++-+.+.++
T Consensus        18 gQ~lsl~~~~t--~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~aN~~   95 (334)
T PF06027_consen   18 GQVLSLCITGT--GTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVEANYL   95 (334)
T ss_pred             HHHHHHHHHhH--HHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHHHHHHH
Confidence            33444444442  33334333 467778877777765443332222222211  11222346777888889888888999


Q ss_pred             HHHhhhccchhHHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeeccc---------ccchHHHHHHH
Q 017423          119 NSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDY---------QFTVMAYSWAL  189 (372)
Q Consensus       119 ~~~al~~~~~~~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~~---------~~~~~G~~~~l  189 (372)
                      .+.|++|++++.++++..++.+++++++++++|+| +++.++.|++++++|++++...|.         +....|+++++
T Consensus        96 ~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~r-y~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l  174 (334)
T PF06027_consen   96 VVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRR-YSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLAL  174 (334)
T ss_pred             HHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhh-hhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHH
Confidence            99999999999999999999999999999999999 999999999999999998876652         23468999999


Q ss_pred             HHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHHHHHHHH
Q 017423          190 AYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLA  269 (372)
Q Consensus       190 ~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (372)
                      +++++||+++++++++.++  .+..+......+.+.++..+...+ -|..++.+     .+|... .+..++ ...+...
T Consensus       175 ~~a~lya~~nV~~E~~v~~--~~~~~~lg~~Glfg~ii~~iq~~i-le~~~i~~-----~~w~~~-~~~~~v-~~~~~lf  244 (334)
T PF06027_consen  175 LGAILYAVSNVLEEKLVKK--APRVEFLGMLGLFGFIISGIQLAI-LERSGIES-----IHWTSQ-VIGLLV-GYALCLF  244 (334)
T ss_pred             HHHHHHHHHHHHHHHhccc--CCHHHHHHHHHHHHHHHHHHHHHh-eehhhhhc-----cCCChh-hHHHHH-HHHHHHH
Confidence            9999999999999999877  445555555555554433333222 23333321     234332 222211 1222223


Q ss_pred             HHHH-HHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccc
Q 017423          270 ISFF-GFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQST  331 (372)
Q Consensus       270 ~~~~-~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~  331 (372)
                      ..|+ .-..++..||+..++-.....+.++++++++||+++++..++|.++|+.|.++|...+
T Consensus       245 ~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~  307 (334)
T PF06027_consen  245 LFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAE  307 (334)
T ss_pred             HHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccC
Confidence            3333 3456899999999988888899999999999999999999999999999999999766

Some of the sequences in this family are annotated as putative membrane proteins.

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.88  E-value=1.5e-20  Score=165.13  Aligned_cols=262  Identities=15%  Similarity=0.102  Sum_probs=213.4

Q ss_pred             cCCchHHHHHHHHHHHHHHHHHHhhcCcccccccchhhhHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHH
Q 017423           64 KFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVA  143 (372)
Q Consensus        64 ~~~~p~~l~~~r~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~v~  143 (372)
                      .|.+|.++.+.|-+.+.+........  .+.+....+.+++....++....+-.+++.||+|++.++..+.|++.-+.|+
T Consensus        47 rF~~~~fL~~~q~l~~~~~s~~~l~~--~k~~~~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVm  124 (327)
T KOG1581|consen   47 RFEHSLFLVFCQRLVALLVSYAMLKW--WKKELSGVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVM  124 (327)
T ss_pred             cccccHHHHHHHHHHHHHHHHHHHhc--ccccCCCCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHH
Confidence            36679999999998888766333222  2222233456778888888888889999999999999999999999999999


Q ss_pred             HHHHHHcCCCCCCHhHHHHHHHHhhhhhheeeccc---------ccchHHHHHHHHHHHHHHHHHHHHHHHhhccCCCch
Q 017423          144 IGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDY---------QFTVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTW  214 (372)
Q Consensus       144 ~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~~---------~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~  214 (372)
                      +++.++.|+| ++.++++...++.+|+.+....+.         ..+..|+.++..+.+..++-+..|+++.++++.+.+
T Consensus       125 lmg~Lvy~~k-y~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~  203 (327)
T KOG1581|consen  125 LMGTLVYGRK-YSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSL  203 (327)
T ss_pred             HHHHHHhcCc-cCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHh
Confidence            9999999998 999999999999999998765421         245789999999999999999999999999999999


Q ss_pred             hHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHH
Q 017423          215 GLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFFGFSCRRAISATGFTVLGIVNK  294 (372)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~  294 (372)
                      ++++|.++.+.+......+..|.+.+..+..    .. ++..+.-+...++++.+.+.+.|..+++.|+.+...++..++
T Consensus       204 ~mM~~vNLf~~i~~~~~li~qg~~~~av~F~----~~-hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk  278 (327)
T KOG1581|consen  204 HMMFGVNLFSAILNGTYLILQGHLLPAVSFI----KE-HPDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRK  278 (327)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCCCCchHHHHH----Hc-ChhHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHH
Confidence            9999999988777777766556544443221    11 122344455556677777777788899999999999999999


Q ss_pred             HHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccccC
Q 017423          295 LLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQSTSN  333 (372)
Q Consensus       295 v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~~~  333 (372)
                      ++++.++.+.|++++++.||+|..++++|+.+-...+.+
T Consensus       279 ~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~  317 (327)
T KOG1581|consen  279 MVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK  317 (327)
T ss_pred             HHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence            999999999999999999999999999999887766533

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.88  E-value=5.2e-22  Score=167.54  Aligned_cols=258  Identities=14%  Similarity=0.144  Sum_probs=213.7

Q ss_pred             cCCchHHHHHHHHHHHHHHHHHHhhcCcccccccchhhhHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHH
Q 017423           64 KFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVA  143 (372)
Q Consensus        64 ~~~~p~~l~~~r~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~v~  143 (372)
                      .|.+...+++.|+.+..+..-++...  ++..+.|..+.+.....++.+.+.+..+|.|++|+|.++..+-+++.|+.++
T Consensus        49 ~FTfalaLVf~qC~~N~vfAkvl~~i--r~~~~~D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVM  126 (337)
T KOG1580|consen   49 KFTFALALVFFQCTANTVFAKVLFLI--RKKTEIDNTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVM  126 (337)
T ss_pred             eehHHHHHHHHHHHHHHHHHHhheee--cccccccCCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCccee
Confidence            36678889999999888766444432  2333455555677788888999999999999999999999999999999999


Q ss_pred             HHHHHHcCCCCCCHhHHHHHHHHhhhhhheeeccc-------ccchHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhH
Q 017423          144 IGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDY-------QFTVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGL  216 (372)
Q Consensus       144 ~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~~-------~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~  216 (372)
                      ++++++.|++ ++|+++..+++++.||++.-+.+.       .....|-++.+++.-..++-...++|+.+.+..+...+
T Consensus       127 ilGVl~~~Ks-Y~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~M  205 (337)
T KOG1580|consen  127 ILGVLFAHKS-YHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSM  205 (337)
T ss_pred             eeehhhhccc-ccHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhh
Confidence            9999988888 999999999999999999876532       22346889999999999999999999987777788889


Q ss_pred             HHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHH
Q 017423          217 VLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLL  296 (372)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~  296 (372)
                      ++|.++-+.+.+...++++||..+.......     .+..|.-+...++.+.+.+++.|..+...||.+-|++.+.++.+
T Consensus       206 M~~~NlwStL~Lg~g~lfTGElweF~yF~~R-----hP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfF  280 (337)
T KOG1580|consen  206 MFYTNLWSTLYLGAGLLFTGELWEFFYFVQR-----HPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFF  280 (337)
T ss_pred             HHHHHHHHHHHhhhhheehhhHHHHHHHHHh-----ccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHH
Confidence            9999998988888888899987776543221     22334455666777777788888889999999999999999999


Q ss_pred             HHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcc
Q 017423          297 TVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQ  329 (372)
Q Consensus       297 ~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~  329 (372)
                      +++.|+++|+++++..||+|.++++.|..+=..
T Consensus       281 Til~SVllf~npls~rQwlgtvlVF~aL~~D~~  313 (337)
T KOG1580|consen  281 TILISVLLFNNPLSGRQWLGTVLVFSALTADVV  313 (337)
T ss_pred             HHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhh
Confidence            999999999999999999999999999876443

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.88  E-value=3e-20  Score=170.70  Aligned_cols=257  Identities=18%  Similarity=0.173  Sum_probs=172.7

Q ss_pred             HHHHHHHHHccCCchHHHHHHHHHHHHHHHHHHhhcC--cccccccchhhhHHHHHHHHHHHHHHHHHHHhhhccchhHH
Q 017423           54 LSIINKWAIMKFPYPGALTALQYFTSAAGVLLCGYFK--FLEHDALELLTVWRFLPAAIIFYLSLFTNSELLLHANVDTF  131 (372)
Q Consensus        54 ~~~~~K~~l~~~~~p~~l~~~r~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~  131 (372)
                      .....|...++-+ +.  ++++...+.+++......+  ..+.++.+++.+......++.......+.+.++++.+++.+
T Consensus        16 ~~~~~k~~~~~~~-~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~   92 (281)
T TIGR03340        16 WNLMAKSHADKEP-DF--LWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGLAQAYHHADVGLV   92 (281)
T ss_pred             HHHHHhhcCCchh-HH--HHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhcCChhhh
Confidence            5677786655423 32  3555544444443332221  11112222233333343444455557778889999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeecc-cccchHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 017423          132 IVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTD-YQFTVMAYSWALAYLVSMTIDFVYIKHVVMTIG  210 (372)
Q Consensus       132 ~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~-~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~  210 (372)
                      +.+.++.|+++++++++++||| ++++++.++++++.|+.++...+ .+.+..|+.++++++++|++|.++.|+..++. 
T Consensus        93 ~~l~~~~p~~~~l~~~~~~~e~-~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~-  170 (281)
T TIGR03340        93 YPLARSSPLLVAIWATLTLGET-LSPLAWLGILIITLGLLVLGLSRFAQHRRKAYAWALAAALGTAIYSLSDKAAALGV-  170 (281)
T ss_pred             hhHHhhhHHHHHHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhhhhccccccch-
Confidence            9999999999999999999999 99999999999999998776543 23455788999999999999999988764332 


Q ss_pred             CCch-hHHHHHhHHHHHH-HHHHHHH--hhhHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHHH-HHHHhcccchhH
Q 017423          211 LNTW-GLVLYNNLEALLL-FPLELLI--MGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFF-GFSCRRAISATG  285 (372)
Q Consensus       211 ~~~~-~~~~~~~~~~~~~-~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~a~~  285 (372)
                       ++. ....+.....+.. .|.....  .++. .        ....+. .+..+++.+.+.+.++|. +++++++.++.+
T Consensus       171 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------~~~~~~-~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~  239 (281)
T TIGR03340       171 -PAFYSALGYLGIGFLAMGWPFLLLYLKRHGR-S--------MFPYAR-QILPSATLGGLMIGGAYALVLWAMTRLPVAT  239 (281)
T ss_pred             -hcccccHHHHHHHHHHHHHHHHHHHHHHhcc-c--------hhhhHH-HHHHHHHHHHHHHHHHHHHHHHHHhhCCceE
Confidence             221 1122221111111 1222111  1110 0        001111 233445666666666665 778999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhh
Q 017423          286 FTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVM  326 (372)
Q Consensus       286 ~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l  326 (372)
                      .+.+.+++|++++++|++++||+++..+++|.++++.|+++
T Consensus       240 ~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       240 VVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             EEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            99999999999999999999999999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.85  E-value=9.4e-18  Score=154.49  Aligned_cols=261  Identities=15%  Similarity=0.125  Sum_probs=184.8

Q ss_pred             HHHHHHHHHccCCchHHHHHHHHHHHHHHHHHHhhcCcccccccchhhhHHHHHHHHHHHHHHHHHHHhhhccchhHHHH
Q 017423           54 LSIINKWAIMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIFYLSLFTNSELLLHANVDTFIV  133 (372)
Q Consensus        54 ~~~~~K~~l~~~~~p~~l~~~r~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~i  133 (372)
                      .....|........+....+.|...+.+........+..+..+..++.++..+..++.......+.+.++++++++.+++
T Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  101 (292)
T COG0697          22 SFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGLALPFLLLFLALKYTSASVASL  101 (292)
T ss_pred             HHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHH
Confidence            45555666655332566666798888766332232221111111111123333344444555777888899999999999


Q ss_pred             HHHHHHHHHHHHHH-HHcCCCCCCHhHHHHHHHHhhhhhheeecccccc---hHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 017423          134 FRSAVPIFVAIGET-LFLHQPWPSIKTWLSLATIFGGSVIYVLTDYQFT---VMAYSWALAYLVSMTIDFVYIKHVVMTI  209 (372)
Q Consensus       134 i~~~~pi~v~~~~~-l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~~~~~---~~G~~~~l~a~~~~a~~~i~~k~~~~~~  209 (372)
                      +.++.|+++.+++. +++||| .+++++.++++++.|+.++...+...+   ..|+.+++.++++++++.+..|+.. + 
T Consensus       102 l~~~~p~~~~~~~~~~~~~e~-~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~~~~l~a~~~~a~~~~~~~~~~-~-  178 (292)
T COG0697         102 IIGLLPLFTALLAVLLLLGER-LSLLQILGILLALAGVLLILLGGGGGGILSLLGLLLALAAALLWALYTALVKRLS-R-  178 (292)
T ss_pred             HHHHHHHHHHHHHHHHHccCC-CcHHHHHHHHHHHHhHHheecCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhc-C-
Confidence            99999999999996 666998 999999999999999999988765433   5899999999999999999999987 3 


Q ss_pred             CCCchhHHH-HHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHHH-HHHHhcccchhHHH
Q 017423          210 GLNTWGLVL-YNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFF-GFSCRRAISATGFT  287 (372)
Q Consensus       210 ~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~a~~~s  287 (372)
                       .++..... +... .......... ..+.        +  .......+..+.+.++++..+.+. +++++++.++...+
T Consensus       179 -~~~~~~~~~~~~~-~~~~~~~~~~-~~~~--------~--~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~  245 (292)
T COG0697         179 -LGPVTLALLLQLL-LALLLLLLFF-LSGF--------G--APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVA  245 (292)
T ss_pred             -CChHHHHHHHHHH-HHHHHHHHHH-hccc--------c--ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHH
Confidence             34444443 2322 1111111111 1110        0  011223455677788888865555 77899999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhccc
Q 017423          288 VLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQS  330 (372)
Q Consensus       288 ~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~  330 (372)
                      .+.+++|+.++++++++++|+++..+++|.++++.|+++....
T Consensus       246 ~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         246 LLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            9999999999999999999999999999999999999988765

>TIGR00688 rarD rarD protein

Probab=99.84  E-value=3.2e-18  Score=155.20  Aligned_cols=229  Identities=11%  Similarity=0.094  Sum_probs=155.1

Q ss_pred             HHHHHHHHHccCCchHHHHHHHHHHHHHHHHHHh-hcCcccc--cc---cchhh-hHHHHHHHHHHHHHHHHHHHhhhcc
Q 017423           54 LSIINKWAIMKFPYPGALTALQYFTSAAGVLLCG-YFKFLEH--DA---LELLT-VWRFLPAAIIFYLSLFTNSELLLHA  126 (372)
Q Consensus        54 ~~~~~K~~l~~~~~p~~l~~~r~~~~~i~~~~~~-~~~~~~~--~~---~~~~~-~~~~~~~~~~~~~~~~~~~~al~~~  126 (372)
                      ..+..|. +.+.+ |..++++|++++.++++... ..++++.  ++   .++++ +......+++......+.+.+++++
T Consensus        17 ~~~~~k~-~~~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~a~~~~   94 (256)
T TIGR00688        17 MYYYSKL-LKPLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLLIGFNWWLFIWAVNNG   94 (256)
T ss_pred             HHHHHHH-hccCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence            4678897 56677 99999999998886654433 2222111  11   11222 2234445655666678889999999


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeecccccchHHHHHHHHHHHHHHHHHHHHHHHh
Q 017423          127 NVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDYQFTVMAYSWALAYLVSMTIDFVYIKHVV  206 (372)
Q Consensus       127 ~~~~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~  206 (372)
                      +++.++++.++.|+++++++++++||| ++++++++++++++|++++..++.+.+    .+++++++||+.|.+..|+..
T Consensus        95 ~~~~a~~l~~~~Pi~~~lla~~~l~Ek-~~~~~~l~~~~~~~Gv~li~~~~~~~~----~~~l~aa~~~a~~~i~~~~~~  169 (256)
T TIGR00688        95 SSLEVSLGYLINPLVMVALGRVFLKER-ISRFQFIAVIIATLGVISNIVLKGSLP----WEALVLAFSFTAYGLIRKALK  169 (256)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHHcCCch----HHHHHHHHHHHHHHHHHhhcC
Confidence            999999999999999999999999999 999999999999999997654322111    357889999999999999874


Q ss_pred             hccCCCchhHHHHHhHHHHHHHHHHHH--HhhhHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHHH-HHHHhcccch
Q 017423          207 MTIGLNTWGLVLYNNLEALLLFPLELL--IMGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFF-GFSCRRAISA  283 (372)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~a  283 (372)
                      ++ +  ..+...+.. .   ..|....  ...++..       ...+.....|..+.+.|+++. +.|. +++++|+.++
T Consensus       170 ~~-~--~~~~~~~~~-~---~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~~~g~~t~-i~~~l~~~a~~~~~a  234 (256)
T TIGR00688       170 NT-D--LAGFCLETL-S---LMPVAIYYLLQTDFAT-------VQQTNPFPIWLLLVLAGLITG-TPLLAFVIAANRLPL  234 (256)
T ss_pred             CC-C--cchHHHHHH-H---HHHHHHHHHHHhccCc-------ccccCchhHHHHHHHHHHHHH-HHHHHHHHHHHcCCh
Confidence            32 2  222222111 1   1122211  1111100       001111123556667777744 4554 7889999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHh
Q 017423          284 TGFTVLGIVNKLLTVVINLVI  304 (372)
Q Consensus       284 ~~~s~~~~l~~v~~~~ls~~~  304 (372)
                      .+.+++.|++|++++++|.++
T Consensus       235 ~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       235 NLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.84  E-value=5.4e-19  Score=152.40  Aligned_cols=271  Identities=13%  Similarity=0.092  Sum_probs=210.0

Q ss_pred             HHHHHHHHHHc--cCC-chHHHHHHHHHHHHHHHHHHhhcCcccccccchhhhHHHHHHHHHHHHHHHHHHHhhhccchh
Q 017423           53 LLSIINKWAIM--KFP-YPGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIFYLSLFTNSELLLHANVD  129 (372)
Q Consensus        53 ~~~~~~K~~l~--~~~-~p~~l~~~r~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~  129 (372)
                      .+..+..++.+  +|+ +.|.+++.|+++-..+.++-...-..+++..   ++|....++.+..+.+.+++.++.|++.+
T Consensus        57 ~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~~~~k~r~i---P~rtY~~la~~t~gtmGLsn~SlgYLNYP  133 (367)
T KOG1582|consen   57 VYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQLIQTKRRVI---PWRTYVILAFLTVGTMGLSNGSLGYLNYP  133 (367)
T ss_pred             HHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEEeecccceec---chhHhhhhHhhhhhccccCcCccccccCc
Confidence            34556666664  565 5799999998765433322111111111222   45666677777777899999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeecc----cccchHHHHHHHHHHHHHHHHHHHHHHH
Q 017423          130 TFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTD----YQFTVMAYSWALAYLVSMTIDFVYIKHV  205 (372)
Q Consensus       130 ~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~----~~~~~~G~~~~l~a~~~~a~~~i~~k~~  205 (372)
                      ...+.|.+.-+.+++.+.++-|+| +++..+.+..++.+|.+..+..|    +.|+..|+.+..++.++.|+-.-.|++.
T Consensus       134 tQviFKccKliPVmiggifIqGkR-Y~v~d~~aA~lm~lGli~FTLADs~~sPNF~~~Gv~mIsgALl~DA~iGNvQEk~  212 (367)
T KOG1582|consen  134 TQVIFKCCKLIPVMIGGIFIQGKR-YGVHDYIAAMLMSLGLIWFTLADSQTSPNFNLIGVMMISGALLADAVIGNVQEKA  212 (367)
T ss_pred             HHHHHHhhhhhhhhheeeeecccc-ccHHHHHHHHHHHHHHHhhhhcccccCCCcceeeHHHHHHHHHHHHHhhHHHHHH
Confidence            999999999999999999999998 99999999999999999888766    4678899999999999999999999999


Q ss_pred             hhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcccchhH
Q 017423          206 VMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFFGFSCRRAISATG  285 (372)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~a~~  285 (372)
                      ++..+.+..++.+|...++.+.+.+.+..+||+.+.+.....    ++.........-...+++...+..-.++..||.+
T Consensus       213 m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcae----hp~~tyGy~~~~s~~gylG~~~VLalI~~fGA~~  288 (367)
T KOG1582|consen  213 MKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAE----HPVRTYGYAFLFSLAGYLGIVFVLALIKLFGALI  288 (367)
T ss_pred             HhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHh----CcHhHHHHHHHHHHHhHhhHHHHHHHHHHhchhH
Confidence            988888888899998888877777777788987776544321    1111122222333334443333445689999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccc
Q 017423          286 FTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQST  331 (372)
Q Consensus       286 ~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~  331 (372)
                      +..+.+.++.+++++|.++|..|+|....-|..+++.|+++-.+.|
T Consensus       289 aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk  334 (367)
T KOG1582|consen  289 AATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK  334 (367)
T ss_pred             HHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence            9999999999999999999999999999999999999999987776

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.83  E-value=1.2e-17  Score=143.14  Aligned_cols=250  Identities=12%  Similarity=0.051  Sum_probs=193.7

Q ss_pred             HHHHHHccCCchHHHHHHHHHHHHHHHHHHhhcCcccccccchhhhHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHH
Q 017423           57 INKWAIMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIFYLSLFTNSELLLHANVDTFIVFRS  136 (372)
Q Consensus        57 ~~K~~l~~~~~p~~l~~~r~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~ii~~  136 (372)
                      ..|....... |.-.+++|..++.++++.++...+   +++++++++.....|+....+..+.+.+++.+|.+.+..+.+
T Consensus        30 ~Ak~LFP~vG-~~g~t~lRl~~aaLIll~l~RPwr---~r~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAiEF  105 (292)
T COG5006          30 FAKSLFPLVG-AAGVTALRLAIAALILLALFRPWR---RRLSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAIEF  105 (292)
T ss_pred             HHHHHccccC-hhhHHHHHHHHHHHHHHHHhhHHH---hccChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhh
Confidence            3466665555 889999999888877766654332   345678888999999988888888999999999999999999


Q ss_pred             HHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeecc---cccchHHHHHHHHHHHHHHHHHHHHHHHhhccCCCc
Q 017423          137 AVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTD---YQFTVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNT  213 (372)
Q Consensus       137 ~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~---~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~  213 (372)
                      +.|+.+.+++    .||   .+...-+.+.+.|+.+.....   .+.|..|..+.+.+..||+.|.+..||.-+.  .+.
T Consensus       106 ~GPL~vA~~~----sRr---~~d~vwvaLAvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~--~~g  176 (292)
T COG5006         106 TGPLAVALLS----SRR---LRDFVWVALAVLGIWLLLPLGQSVWSLDPVGVALALGAGACWALYIVLGQRAGRA--EHG  176 (292)
T ss_pred             ccHHHHHHHh----ccc---hhhHHHHHHHHHHHHhheeccCCcCcCCHHHHHHHHHHhHHHHHHHHHcchhccc--CCC
Confidence            9999888555    444   356666777888877665433   4578899999999999999999999998643  333


Q ss_pred             hhHHHHHhH-HHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHHH-HHHHhcccchhHHHHHHH
Q 017423          214 WGLVLYNNL-EALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFF-GFSCRRAISATGFTVLGI  291 (372)
Q Consensus       214 ~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~a~~~s~~~~  291 (372)
                      .+-..+... .+++.+|+.....+            +...++.....-+..+++++.+.|+ ...++++.++.++++...
T Consensus       177 ~~g~a~gm~vAaviv~Pig~~~ag------------~~l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlS  244 (292)
T COG5006         177 TAGVAVGMLVAALIVLPIGAAQAG------------PALFSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLS  244 (292)
T ss_pred             chHHHHHHHHHHHHHhhhhhhhcc------------hhhcChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHH
Confidence            333333333 34555565543222            1233444555667789999999998 788999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccc
Q 017423          292 VNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQST  331 (372)
Q Consensus       292 l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~  331 (372)
                      ++|.++.+.|++++||.+|+.||+|++.++.++.-.....
T Consensus       245 LePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~  284 (292)
T COG5006         245 LEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTA  284 (292)
T ss_pred             hhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcccccc
Confidence            9999999999999999999999999999999988666555

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=99.77  E-value=3.1e-18  Score=148.25  Aligned_cols=279  Identities=14%  Similarity=0.155  Sum_probs=193.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHccCCc-hHHHHHHHHHHHHHHHHHHh-hcCcccccccchhhhHHHHHHHHHHHHHHHHH
Q 017423           42 GVAAGYCISASLLSIINKWAIMKFPY-PGALTALQYFTSAAGVLLCG-YFKFLEHDALELLTVWRFLPAAIIFYLSLFTN  119 (372)
Q Consensus        42 ~~~~~~~~~~~~~~~~~K~~l~~~~~-p~~l~~~r~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (372)
                      ..+..-|+++   .+.-..+.+..|- -..+|+.|+++-++--++.. -+...+ +++   ..|.++.....++....++
T Consensus         9 ~~vf~GCcsn---vv~lE~L~~~~pgsgNLITFaqFlFia~eGlif~skf~~~k-~ki---plk~Y~i~V~mFF~vnv~N   81 (330)
T KOG1583|consen    9 SLVFGGCCSN---VVFLELLVRNEPGSGNLITFAQFLFIATEGLIFTSKFFTVK-PKI---PLKDYAITVAMFFIVNVTN   81 (330)
T ss_pred             HHHHHhhhch---HHHHHHHHHhCCCCeeehHHHHHHHHHHhceeeeccccccC-CCC---chhhhheehheeeeeeeec
Confidence            3344444444   3344445554443 47889999864443222211 111111 223   3444555555666667789


Q ss_pred             HHhhhc-cchhHHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeecc---cc--------------cc
Q 017423          120 SELLLH-ANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTD---YQ--------------FT  181 (372)
Q Consensus       120 ~~al~~-~~~~~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~---~~--------------~~  181 (372)
                      |.++++ ++.+...++|+.+++..+++++++.|+| ++.+++.++++..+|+++.+..+   .+              +.
T Consensus        82 N~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~-Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~  160 (330)
T KOG1583|consen   82 NYALKFNIPMPLHIIFRSGSLLANMILGWILLGKR-YSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFF  160 (330)
T ss_pred             cceeeecccceEEEEEecCcHHHHHHHHHHhccce-eehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccch
Confidence            999988 8999999999999999999999999998 99999999999999999886531   10              01


Q ss_pred             --hHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhccc-------ccc
Q 017423          182 --VMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTAS-------DWY  252 (372)
Q Consensus       182 --~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-------~~~  252 (372)
                        ..|+.+...+.+..|.-.++++...++++-++-+.++|+.++++   |..++...|+.+.+......+       ...
T Consensus       161 ~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsL---P~Flf~~~div~~~~~~~~se~~~~p~~g~~  237 (330)
T KOG1583|consen  161 WWLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSL---PLFLFMGDDIVSHWRLAFKSESYLIPLLGFK  237 (330)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhcc---chHHHhcchHHHHHHHHhcCcceeccccCcc
Confidence              25999999999999999999999999999999999999998885   555444445443332211110       111


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccc
Q 017423          253 SFEVVLPVGLSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQST  331 (372)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~  331 (372)
                      -+..|..++...+.-++.--..|.+-.++++.|++++-++++.++.++|.++|++++|+++|+|.++++.|.++|+...
T Consensus       238 vP~~~~yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~~  316 (330)
T KOG1583|consen  238 VPSMWVYLLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANVW  316 (330)
T ss_pred             ccHHHHHHHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            1222333333332222222223444568999999999999999999999999999999999999999999999998655

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.74  E-value=3e-15  Score=137.85  Aligned_cols=249  Identities=11%  Similarity=0.066  Sum_probs=172.3

Q ss_pred             HHHHHHHHccCCchHHHHHHHHHHHHHHHHHHhhcCcccccccc-hhhhHHHHHHHHHHHHHHHHHHHhhhccchhHHHH
Q 017423           55 SIINKWAIMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALE-LLTVWRFLPAAIIFYLSLFTNSELLLHANVDTFIV  133 (372)
Q Consensus        55 ~~~~K~~l~~~~~p~~l~~~r~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~i  133 (372)
                      .+..|... +++.+.. .  |+.++.+++....... ++ ++.+ ++.+..-+..|+....+..+.+.+.++++++.+..
T Consensus        17 g~~~k~~~-g~~~~~~-~--~~~~g~l~~~~~~~~~-~~-~~~~~~~~~~~g~l~G~~w~ig~~~~~~ai~~~gva~a~~   90 (290)
T TIGR00776        17 VLINVKIG-GGPYSQT-L--GTTFGALILSIAIAIF-VL-PEFWALSIFLVGLLSGAFWALGQINQFKSMRYMGVSKTMP   90 (290)
T ss_pred             HHHHhccC-CCHHHHH-H--HHHHHHHHHHHHHHHH-hC-CcccccHHHHHHHHHHHHHHhhhhhHHHHHHHHhHHHHhH
Confidence            45556555 5553333 2  6766666554433221 11 1111 22222233334445555678889999999999988


Q ss_pred             HHH-HHHHHHHHHHHHHcCCCCCCHhH----HHHHHHHhhhhhheeecccc-------cc-hHHHHHHHHHHHHHHHHHH
Q 017423          134 FRS-AVPIFVAIGETLFLHQPWPSIKT----WLSLATIFGGSVIYVLTDYQ-------FT-VMAYSWALAYLVSMTIDFV  200 (372)
Q Consensus       134 i~~-~~pi~v~~~~~l~l~~~~~~~~~----~~~~~~~~~Gv~l~~~~~~~-------~~-~~G~~~~l~a~~~~a~~~i  200 (372)
                      +.+ +.++++.+++.+++||+ .++++    ++++++.+.|+.+....+.+       .+ ..|+++++++.++|+.|.+
T Consensus        91 i~~~~~~v~~~l~~~~~f~e~-~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~~Gi~~~l~sg~~y~~~~~  169 (290)
T TIGR00776        91 ISTGFQLVGGTLFGVIVFGEW-STSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFKKGILLLLMSTIGYLVYVV  169 (290)
T ss_pred             HHHHHHHHHHHHHHHHHhhhc-cchHHHHHHHHHHHHHHHhHheEEeccccccccccccchhhHHHHHHHHHHHHHHHHH
Confidence            888 88889999999999999 78888    99999999999988664321       23 5799999999999999999


Q ss_pred             HHHHHhhccCCCchhHHHHHhH----HHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHHH-HH
Q 017423          201 YIKHVVMTIGLNTWGLVLYNNL----EALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFF-GF  275 (372)
Q Consensus       201 ~~k~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  275 (372)
                      ..|+.    +.++++..+.+..    .+.++.++. .   +     .     ..+.....+..++ .|++. .+++. ++
T Consensus       170 ~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~-~---~-----~-----~~~~~~~~~~~~~-~Gi~~-~ia~~~y~  229 (290)
T TIGR00776       170 VAKAF----GVDGLSVLLPQAIGMVIGGIIFNLGH-I---L-----A-----KPLKKYAILLNIL-PGLMW-GIGNFFYL  229 (290)
T ss_pred             HHHHc----CCCcceehhHHHHHHHHHHHHHHHHH-h---c-----c-----cchHHHHHHHHHH-HHHHH-HHHHHHHH
Confidence            99975    2566666444432    222222221 0   0     0     0111222333344 78884 55555 55


Q ss_pred             HHhc-ccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhH----HHHHHHHHhhhhhccc
Q 017423          276 SCRR-AISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGT----VGLLICMLGGVMYQQS  330 (372)
Q Consensus       276 ~~i~-~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~----~G~~lil~g~~l~~~~  330 (372)
                      ...+ +.++.+.++..+++|+.+++++++++||+.+..++    +|.++++.|+.+....
T Consensus       230 ~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~~  289 (290)
T TIGR00776       230 FSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGIG  289 (290)
T ss_pred             HHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhcc
Confidence            7788 99999999999999999999999999999999999    9999999999876543

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.74  E-value=6.5e-19  Score=151.69  Aligned_cols=273  Identities=11%  Similarity=0.070  Sum_probs=188.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHHHhhcCcccccccch-hhhHHHHHHHHHHHHHHHHHH
Q 017423           42 GVAAGYCISASLLSIINKWAIMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALEL-LTVWRFLPAAIIFYLSLFTNS  120 (372)
Q Consensus        42 ~~~~~~~~~~~~~~~~~K~~l~~~~~p~~l~~~r~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  120 (372)
                      +..+.|++.+ .+.+..|...  .+ |..+.-.|+++-.+....+....+..  -+.. ...+.++..|+.+..++...+
T Consensus        42 l~~vs~ff~~-~~vv~t~~~e--~~-p~e~a~~r~l~~mlit~pcliy~~~~--v~gp~g~R~~LiLRg~mG~tgvmlmy  115 (346)
T KOG4510|consen   42 LLTVSYFFNS-CMVVSTKVLE--ND-PMELASFRLLVRMLITYPCLIYYMQP--VIGPEGKRKWLILRGFMGFTGVMLMY  115 (346)
T ss_pred             ehhhHHHHhh-HHHhhhhhhc--cC-hhHhhhhhhhhehhhhheEEEEEeee--eecCCCcEEEEEeehhhhhhHHHHHH
Confidence            3344555544 4666666544  33 66666666544444333333332221  1111 223334556788888888999


Q ss_pred             HhhhccchhHHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeecc-----c---------ccchHHHH
Q 017423          121 ELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTD-----Y---------QFTVMAYS  186 (372)
Q Consensus       121 ~al~~~~~~~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~-----~---------~~~~~G~~  186 (372)
                      ++++|++.+-+.++..++|.++.++++.++||+ .+..+.++..+.+.||+++....     .         +.+..|.+
T Consensus       116 ya~~~mslaDA~vItFssPvft~ifaw~~LkE~-~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~~gt~  194 (346)
T KOG4510|consen  116 YALMYMSLADAVVITFSSPVFTIIFAWAFLKEP-FTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDIPGTV  194 (346)
T ss_pred             HHHhhcchhheEEEEecChHHHHHHHHHHHcCC-CcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccCCchH
Confidence            999999999999999999999999999999999 89999999999999999886431     1         23456888


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHHHHH
Q 017423          187 WALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCIF  266 (372)
Q Consensus       187 ~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (372)
                      .++.+++.-|.-.+..|++-|+  .+......|..+++++...+....-|+++    .+   ..+.   -|..++..|++
T Consensus       195 aai~s~lf~asvyIilR~iGk~--~h~~msvsyf~~i~lV~s~I~~~~ig~~~----lP---~cgk---dr~l~~~lGvf  262 (346)
T KOG4510|consen  195 AAISSVLFGASVYIILRYIGKN--AHAIMSVSYFSLITLVVSLIGCASIGAVQ----LP---HCGK---DRWLFVNLGVF  262 (346)
T ss_pred             HHHHhHhhhhhHHHHHHHhhcc--ccEEEEehHHHHHHHHHHHHHHhhcccee----cC---cccc---ceEEEEEehhh
Confidence            8888888887777888887665  44444444555444332222222223221    11   1122   23345667888


Q ss_pred             HHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccccC
Q 017423          267 GLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQSTSN  333 (372)
Q Consensus       267 ~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~~~  333 (372)
                      ++..+......+++--|...++..+.+-+++.++.+++|||.+|++.|.|+++++.+.++....|..
T Consensus       263 gfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~kwa  329 (346)
T KOG4510|consen  263 GFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKKWA  329 (346)
T ss_pred             hhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHHHh
Confidence            8888887777777777777799999999999999999999999999999999999998887766533

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.72  E-value=3.1e-16  Score=130.77  Aligned_cols=146  Identities=16%  Similarity=0.285  Sum_probs=120.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhc-----cCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhccc-ccc-hhHH
Q 017423          184 AYSWALAYLVSMTIDFVYIKHVVMT-----IGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTAS-DWY-SFEV  256 (372)
Q Consensus       184 G~~~~l~a~~~~a~~~i~~k~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~-~~~~  256 (372)
                      |+++++.++++.++++++.|+.+++     .+.+++++.+|+++.+.+++.+..+..++............ +.. ....
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            7889999999999999999999988     57999999999999886665555444444332211111001 111 3356


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcc
Q 017423          257 VLPVGLSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQ  329 (372)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~  329 (372)
                      +..++.+|++++..+++.+++++++||.+.++.+.+|.+..+++|+++|+|++|+.+++|+++.+.|+++|++
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            7778899999999999999999999999999999999999999999999999999999999999999999975

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.72  E-value=1.5e-14  Score=131.02  Aligned_cols=271  Identities=18%  Similarity=0.167  Sum_probs=196.7

Q ss_pred             HHHHHHHHHHcc--CCc-hHHHHHHHHHHHHHHHHHHhhcCc-----cccccc------chhhhHHHHHHHHHHHHHHHH
Q 017423           53 LLSIINKWAIMK--FPY-PGALTALQYFTSAAGVLLCGYFKF-----LEHDAL------ELLTVWRFLPAAIIFYLSLFT  118 (372)
Q Consensus        53 ~~~~~~K~~l~~--~~~-p~~l~~~r~~~~~i~~~~~~~~~~-----~~~~~~------~~~~~~~~~~~~~~~~~~~~~  118 (372)
                      .+....|+.-..  .+| |.+..++-=++..+++....+.+.     +..+.+      .+++..++...+++|......
T Consensus        29 ~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~vPa~iYalqNnl  108 (345)
T KOG2234|consen   29 ALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVSVPALIYALQNNL  108 (345)
T ss_pred             hHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHHHHHHHHHHhhhH
Confidence            367777777743  333 555554444555555544433321     111111      233556677777888887668


Q ss_pred             HHHhhhccchhHHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeecc-----------cccchHHHHH
Q 017423          119 NSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTD-----------YQFTVMAYSW  187 (372)
Q Consensus       119 ~~~al~~~~~~~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~-----------~~~~~~G~~~  187 (372)
                      .+.++.+.+++++++...+..+.++++.+++++|| .++++|.++++.+.|+.+...+.           .+..+.|+..
T Consensus       109 ~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rk-Ls~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~~~~~~n~~~G~~a  187 (345)
T KOG2234|consen  109 QYVALSNLDAATYQVTYQLKILTTAIFSVLILRRK-LSRLQWMALVLLFAGVALVQLPSLSPTGAKSESSAQNPFLGLVA  187 (345)
T ss_pred             HHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhh-hhHHHHHHHHHHHHHHHHHhccCCCCCCccCCCcccchhhhHHH
Confidence            88999999999999999999999999999999999 99999999999999999876211           1234679999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhc-ccccchhHHHHHHHHHHHH
Q 017423          188 ALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTT-ASDWYSFEVVLPVGLSCIF  266 (372)
Q Consensus       188 ~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  266 (372)
                      ++.+|+..++..+|.+|++|+.+.+.|.........++++.....+.. |.....  +.. +..| +...|+.++.-++-
T Consensus       188 vl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~-d~~~i~--~~gff~G~-s~~vw~vVl~~a~g  263 (345)
T KOG2234|consen  188 VLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQ-DGEAIN--EYGFFYGY-SSIVWLVVLLNAVG  263 (345)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhc-cccccc--cCCccccc-cHHHHHHHHHHhcc
Confidence            999999999999999999998788777776666666655544444332 333322  111 1233 34466666666666


Q ss_pred             HHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhccccc
Q 017423          267 GLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQSTS  332 (372)
Q Consensus       267 ~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~~  332 (372)
                      |...++    .+|+.+-..-+....+..+++.+.|+.+||.++|....+|..+++.++.+|...+.
T Consensus       264 GLlvs~----v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~  325 (345)
T KOG2234|consen  264 GLLVSL----VMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPA  325 (345)
T ss_pred             chhHHH----HHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCc
Confidence            665553    35777777777777788899999999999999999999999999999999996553

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.69  E-value=4.6e-15  Score=132.36  Aligned_cols=214  Identities=18%  Similarity=0.197  Sum_probs=165.7

Q ss_pred             chhhhHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeecc
Q 017423           98 ELLTVWRFLPAAIIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTD  177 (372)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~  177 (372)
                      ++++..++...++++.....+.+.++++++++++++++.+..+++++++++++||| .++++|.++++.+.|+.+...++
T Consensus        13 ~~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~-ls~~qW~aL~lL~~Gv~lv~~~~   91 (244)
T PF04142_consen   13 SPKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRR-LSRRQWLALFLLVAGVVLVQLSS   91 (244)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcc-cchhhHHHHHHHHHHHheeecCC
Confidence            34567778888889999888899999999999999999999999999999999999 99999999999999999875432


Q ss_pred             c-----------------ccchHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHH
Q 017423          178 Y-----------------QFTVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKK  240 (372)
Q Consensus       178 ~-----------------~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  240 (372)
                      .                 .....|++++++++++.++..++.+|++|+.+.+.|.........++++..+.... .+...
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~-~~~~~  170 (244)
T PF04142_consen   92 SQSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLL-SDGSA  170 (244)
T ss_pred             ccccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhc-ccccc
Confidence            1                 11357999999999999999999999999987777777766666665554444322 22222


Q ss_pred             HHHhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHH
Q 017423          241 IKHEMTTASDWYSFEVVLPVGLSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLI  319 (372)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~l  319 (372)
                      ..+. ..+..+ +...|..+...++.|...+    ..+|+.+...-+....+..+++.++++++|+.++|....+|.++
T Consensus       171 ~~~~-g~f~G~-~~~~~~~i~~~a~gGllva----~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~  243 (244)
T PF04142_consen  171 ISES-GFFHGY-SWWVWIVIFLQAIGGLLVA----FVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAAL  243 (244)
T ss_pred             cccC-Cchhhc-chHHHHHHHHHHHhhHHHH----HHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheec
Confidence            2111 011223 2334555555555555443    35799999999999999999999999999999999999999865

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.69  E-value=9.9e-15  Score=126.84  Aligned_cols=278  Identities=21%  Similarity=0.271  Sum_probs=193.9

Q ss_pred             HHHHHHHHHHHHHHHHc-------cCCchHHHHHHHHHHHH-HHHHHHhhcCcccc-c-------c-c--chh--hhHHH
Q 017423           47 YCISASLLSIINKWAIM-------KFPYPGALTALQYFTSA-AGVLLCGYFKFLEH-D-------A-L--ELL--TVWRF  105 (372)
Q Consensus        47 ~~~~~~~~~~~~K~~l~-------~~~~p~~l~~~r~~~~~-i~~~~~~~~~~~~~-~-------~-~--~~~--~~~~~  105 (372)
                      ...+++..+++.||.-+       +|.+|+..+.. |+.+- .++.+....+.+.. +       . .  +.+  +.+.+
T Consensus        11 mvvsGs~Ntl~aKwadsi~~eg~pgfqhpvlqal~-mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~lf   89 (372)
T KOG3912|consen   11 MVVSGSFNTLVAKWADSIQAEGSPGFQHPVLQALL-MFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVLF   89 (372)
T ss_pred             hhhhccHHHHHHHHHHhhhhhCCCccccHHHHHHH-HHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCccee
Confidence            33455567899999883       36667655543 33333 22223222222210 0       0 0  111  13345


Q ss_pred             HHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeecc--------
Q 017423          106 LPAAIIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTD--------  177 (372)
Q Consensus       106 ~~~~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~--------  177 (372)
                      ++.+++-..+....+.++.+++++.+|++|....+|+.+++.-+++++ ...++|+++.....|++++...|        
T Consensus        90 l~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~t-i~~~qWl~i~fv~lGlviVg~~d~~~~~~p~  168 (372)
T KOG3912|consen   90 LPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRT-ITGRQWLGILFVSLGLVIVGSLDVHLVTDPY  168 (372)
T ss_pred             cChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcc-cchhhHHHHHHHHhhhheeeeeecccccCCc
Confidence            667888777877889999999999999999999999999999999999 89999999999999999876543        


Q ss_pred             --cccchHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHH-----HHHHHHHhhh---------HHHH
Q 017423          178 --YQFTVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLL-----FPLELLIMGE---------LKKI  241 (372)
Q Consensus       178 --~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~g~---------~~~~  241 (372)
                        .+.-..|+++.+++-+.-|++.++.+|.+++.+.+|.+...|..+.++.+     .|...+..++         +.+.
T Consensus       169 ~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~  248 (372)
T KOG3912|consen  169 TDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDW  248 (372)
T ss_pred             cccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhH
Confidence              12335799999999999999999999999999999999888877665332     3333333231         1111


Q ss_pred             HHhhhcccccchhHHHHHHHHHHHHHHH--HHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHH
Q 017423          242 KHEMTTASDWYSFEVVLPVGLSCIFGLA--ISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLI  319 (372)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~l  319 (372)
                      .........  ++  .+.+...|..-++  .|+......|..|+++-.+...++..+..+++.....|.+...|+.|.++
T Consensus       249 ~~~~~~~~e--~p--~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFli  324 (372)
T KOG3912|consen  249 GDAFAALQE--SP--SLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLI  324 (372)
T ss_pred             HHHHHHhcC--Cc--hhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHH
Confidence            000000001  11  1223333333222  23334445788999999999999999999999999999999999999999


Q ss_pred             HHHhhhhhccc
Q 017423          320 CMLGGVMYQQS  330 (372)
Q Consensus       320 il~g~~l~~~~  330 (372)
                      .+.|.++|+..
T Consensus       325 Li~Gi~lY~~i  335 (372)
T KOG3912|consen  325 LIMGIILYNQI  335 (372)
T ss_pred             HHHHHHHHHHH
Confidence            99999999743

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.63  E-value=8.1e-13  Score=116.65  Aligned_cols=268  Identities=13%  Similarity=0.117  Sum_probs=179.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHHHhhc--Ccccccccc--hhhhHHHHHHHHHHHHHHH
Q 017423           42 GVAAGYCISASLLSIINKWAIMKFPYPGALTALQYFTSAAGVLLCGYF--KFLEHDALE--LLTVWRFLPAAIIFYLSLF  117 (372)
Q Consensus        42 ~~~~~~~~~~~~~~~~~K~~l~~~~~p~~l~~~r~~~~~i~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  117 (372)
                      ..+.+|+.++. ..++-| .++..+ +..+...|.+-+...++.....  +.++.....  ++.+..+...+++-..+..
T Consensus        11 ~~l~Ay~lwG~-lp~y~k-ll~~~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li~~nW~   87 (293)
T COG2962          11 LALLAYLLWGL-LPLYFK-LLEPLP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLIGLNWW   87 (293)
T ss_pred             HHHHHHHHHHH-HHHHHH-HHccCC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence            44567777764 667777 445667 8899999998877766554332  212212211  1222223333333333445


Q ss_pred             HHHHhhhccchhHHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeecccccchHHHHHHHHHHHHHHH
Q 017423          118 TNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDYQFTVMAYSWALAYLVSMTI  197 (372)
Q Consensus       118 ~~~~al~~~~~~~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~  197 (372)
                      ...+|...-.+-.+++=...-|++.++++.+++||| .++.++++++++.+||..-.+...++++..+.+    +++|++
T Consensus        88 lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkEr-ls~~Q~iAV~lA~~GV~~~~~~~g~lpwval~l----a~sf~~  162 (293)
T COG2962          88 LFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKER-LSRLQWIAVGLAAAGVLIQTWLLGSLPWVALAL----ALSFGL  162 (293)
T ss_pred             HhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHH----HHHHHH
Confidence            555566655566677778889999999999999999 999999999999999998887777788777654    367788


Q ss_pred             HHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHH---hhhHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHHHH
Q 017423          198 DFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLI---MGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFFG  274 (372)
Q Consensus       198 ~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (372)
                      |...-|++    +.+..+-..--   ...+.|+....   .++-...       ....+...+..++.+|.++.+--...
T Consensus       163 Ygl~RK~~----~v~a~~g~~lE---~l~l~p~al~yl~~l~~~~~~-------~~~~~~~~~~LLv~aG~vTavpL~lf  228 (293)
T COG2962         163 YGLLRKKL----KVDALTGLTLE---TLLLLPVALIYLLFLADSGQF-------LQQNANSLWLLLVLAGLVTAVPLLLF  228 (293)
T ss_pred             HHHHHHhc----CCchHHhHHHH---HHHHhHHHHHHHHHHhcCchh-------hhcCCchHHHHHHHhhHHHHHHHHHH
Confidence            87765553    34443322211   12233443321   1211100       01012223555667777776554445


Q ss_pred             HHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccc
Q 017423          275 FSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQST  331 (372)
Q Consensus       275 ~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~  331 (372)
                      ..+-++.+-.+.++..|++|....+++++++||+++..+.+..++|..|.++|....
T Consensus       229 ~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~  285 (293)
T COG2962         229 AAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDG  285 (293)
T ss_pred             HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            567899999999999999999999999999999999999999999999999997654

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.57  E-value=1.3e-13  Score=124.76  Aligned_cols=212  Identities=17%  Similarity=0.175  Sum_probs=159.7

Q ss_pred             HHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeeccc--------ccchHH
Q 017423          113 YLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDY--------QFTVMA  184 (372)
Q Consensus       113 ~~~~~~~~~al~~~~~~~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~~--------~~~~~G  184 (372)
                      +...++.|.||.|++++..+++.+++-+|+..++.++.+|| .++.+.+++.+.++|+++++.+|.        +-...|
T Consensus       170 F~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~-ft~sKllav~~si~GViiVt~~~s~~~~~~~a~~~llG  248 (416)
T KOG2765|consen  170 FLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVER-FTLSKLLAVFVSIAGVIIVTMGDSKQNSDLPASRPLLG  248 (416)
T ss_pred             HHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcch-hhHHHHHHHHHhhccEEEEEeccccccccCCccchhHH
Confidence            34567789999999999999999999999999998888888 999999999999999999987742        234789


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccC--CCchhHHHHHhHHHHHH-HHHHHHHhhhHHHHHHhhhcccccchhHHHHHHH
Q 017423          185 YSWALAYLVSMTIDFVYIKHVVMTIG--LNTWGLVLYNNLEALLL-FPLELLIMGELKKIKHEMTTASDWYSFEVVLPVG  261 (372)
Q Consensus       185 ~~~~l~a~~~~a~~~i~~k~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  261 (372)
                      .++++++++.||+|.++.||-..+++  ++......|..++.+++ .|+..++.-  ..  ++..+.+.  ... ...++
T Consensus       249 ~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~--~~--~e~F~lP~--~~q-~~~vv  321 (416)
T KOG2765|consen  249 NLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDF--FG--EERFELPS--STQ-FSLVV  321 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHH--hc--cCcccCCC--Cce-eEeee
Confidence            99999999999999999999887753  33333333444444332 344433211  00  00111111  111 22344


Q ss_pred             HHHHHHHHH-HHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhccccc
Q 017423          262 LSCIFGLAI-SFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQSTS  332 (372)
Q Consensus       262 ~~~~~~~~~-~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~~  332 (372)
                      ..+++++++ -|.+.++.--++|.+..+-..+....+.+...++=+.++++..++|.+.|++|.+..++..+
T Consensus       322 ~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~  393 (416)
T KOG2765|consen  322 FNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSE  393 (416)
T ss_pred             HhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccc
Confidence            455555554 45577888899999999999999999999999988999999999999999999998887653

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.36  E-value=3.3e-13  Score=115.95  Aligned_cols=265  Identities=12%  Similarity=0.093  Sum_probs=178.5

Q ss_pred             HHHHHHHHHHHHHHHHHHc-cCCchHHHHHHHHHHHHHHHHHHhhcCcccccccchhhhHHHHHHHHHHHHHHHHHHHhh
Q 017423           45 AGYCISASLLSIINKWAIM-KFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIFYLSLFTNSELL  123 (372)
Q Consensus        45 ~~~~~~~~~~~~~~K~~l~-~~~~p~~l~~~r~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al  123 (372)
                      +..|.++  ..+.+..+-. +.+.|..-++..+..-++.--.+..+|+   +.+ +-.|++.+.+++.-+-+.++--.|.
T Consensus        26 LSL~~t~--~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~---~~~-~~~~~hYilla~~DVEaNy~vV~Ay   99 (336)
T KOG2766|consen   26 LSLLITS--TAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRR---KYI-KAKWRHYILLAFVDVEANYFVVKAY   99 (336)
T ss_pred             HHHHHHc--chhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhh---HHH-HHHHHHhhheeEEeecccEEEeeeh
Confidence            3444444  2445555554 4777877777766544433333333332   221 2345666666655444444456789


Q ss_pred             hccchhHHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeeccc--------ccchHHHHHHHHHHHHH
Q 017423          124 LHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDY--------QFTVMAYSWALAYLVSM  195 (372)
Q Consensus       124 ~~~~~~~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~~--------~~~~~G~~~~l~a~~~~  195 (372)
                      +|++....+.+..-..+.+++++++++|.| +++.++.+++++++|+.+...+|.        +....|+.++++++-+|
T Consensus       100 QyTsmtSi~lLDcwaip~v~~lsw~fLktr-Yrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GATlY  178 (336)
T KOG2766|consen  100 QYTSMTSIMLLDCWAIPCVLVLSWFFLKTR-YRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLY  178 (336)
T ss_pred             hhcchHHHHHHHHhhhHHHHHHHHHHHHHH-HhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecceee
Confidence            999999999999999999999999999999 999999999999999998876552        23457999999999999


Q ss_pred             HHHHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHH-HHHHHHHHHH-
Q 017423          196 TIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLS-CIFGLAISFF-  273 (372)
Q Consensus       196 a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-  273 (372)
                      |..++..+.+.|+  .+..+++....+.+.++-.+.++.+-.  .     ....+|.    +-...+. ..+..+.-|+ 
T Consensus       179 aVSNv~EEflvkn--~d~~elm~~lgLfGaIIsaIQ~i~~~~--~-----~~tl~w~----~~i~~yl~f~L~MFllYsl  245 (336)
T KOG2766|consen  179 AVSNVSEEFLVKN--ADRVELMGFLGLFGAIISAIQFIFERH--H-----VSTLHWD----SAIFLYLRFALTMFLLYSL  245 (336)
T ss_pred             eeccccHHHHHhc--CcHHHHHHHHHHHHHHHHHHHHhhhcc--c-----eeeEeeh----HHHHHHHHHHHHHHHHHHh
Confidence            9999999998876  667777665555554443333322111  0     0112332    1122222 2333333444 


Q ss_pred             HHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccc
Q 017423          274 GFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQST  331 (372)
Q Consensus       274 ~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~  331 (372)
                      .-..+|..|++..++-.......++++  ..||-+++|.-.+..+.+..|.++|..+.
T Consensus       246 ~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~re  301 (336)
T KOG2766|consen  246 APILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTRE  301 (336)
T ss_pred             hHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeeccc
Confidence            334578888888887777778888877  67888999999999999999999996443

>TIGR00803 nst UDP-galactose transporter

Probab=99.31  E-value=3e-11  Score=107.13  Aligned_cols=191  Identities=17%  Similarity=0.158  Sum_probs=129.6

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeeccc---------------------------
Q 017423          126 ANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDY---------------------------  178 (372)
Q Consensus       126 ~~~~~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~~---------------------------  178 (372)
                      +++|.....++..++++++....+.++| ++..++++..++..|+.....+|.                           
T Consensus         2 isvPa~~~~~s~~l~~v~l~~~~~~~~~-~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~   80 (222)
T TIGR00803         2 LSVPIHIIFKQNNLVLIALGNLLAAGKQ-VTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMF   80 (222)
T ss_pred             ccccchHHHHhcchHHHHHhccccccee-eehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCcccccc
Confidence            4678888999999999999998888888 779999999999998875322211                           


Q ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhh--c-ccccchhH
Q 017423          179 QFTVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMT--T-ASDWYSFE  255 (372)
Q Consensus       179 ~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~-~~~~~~~~  255 (372)
                      ...+.|....+.++++.++-.+++++..|+++..     +|.+..++.+........++.....+...  . ...+ +..
T Consensus        81 g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~-----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  154 (222)
T TIGR00803        81 GNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTM-----FWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGY-PTA  154 (222)
T ss_pred             ccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCc-----hHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCC-chH
Confidence            1235677778888888899999999986654332     34433332221111111111110000000  0 1112 222


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhh
Q 017423          256 VVLPVGLSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMY  327 (372)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~  327 (372)
                      .|..    .+...+.+.+..+++|+.++.+.++...++++++.++|+++|||+++..+++|..+++.|+++|
T Consensus       155 ~~~~----~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       155 VWIV----GLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             HHHH----HHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence            2222    2333333444667899999999999999999999999999999999999999999999998775

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.17  E-value=2.5e-10  Score=88.18  Aligned_cols=136  Identities=14%  Similarity=0.146  Sum_probs=105.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHH
Q 017423          184 AYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLS  263 (372)
Q Consensus       184 G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (372)
                      -.+|++++++++++..++.|.-.++  .||...+..-++....++....+..|+++..        ...+...|..++.+
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~~--vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~--------~~~~~k~~lflilS   73 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLEG--VDPDFATTIRTIVILIFLLIVLLVTGNWQAG--------GEIGPKSWLFLILS   73 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccc--cCccHHHHHHHHHHHHHHHHHHHhcCceecc--------cccCcceehhhhHH
Confidence            4678999999999999999987766  5565555555554444444444556654322        11233456667888


Q ss_pred             HHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcc
Q 017423          264 CIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQ  329 (372)
Q Consensus       264 ~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~  329 (372)
                      |+.+-.--+++|++++.-.++.+..+.-..+++++++|+++++|++|..+|+|+++|..|.++.++
T Consensus        74 Gla~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          74 GLAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             HHHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            977776666789999999999999999999999999999999999999999999999999887654

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.15  E-value=4e-10  Score=90.04  Aligned_cols=117  Identities=19%  Similarity=0.216  Sum_probs=95.7

Q ss_pred             HHHHHHHHHccCCchHHHHHHHHHHHHHHHHHHhh-cCcccccccchhhhHHHHHHHHH-HHHHHHHHHHhhhccchhHH
Q 017423           54 LSIINKWAIMKFPYPGALTALQYFTSAAGVLLCGY-FKFLEHDALELLTVWRFLPAAII-FYLSLFTNSELLLHANVDTF  131 (372)
Q Consensus        54 ~~~~~K~~l~~~~~p~~l~~~r~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~~~~~~~  131 (372)
                      ..+.+|...++++ |...+++|+..+.+ +..+.. .+..+.+..+++.+......+++ ......+.+.++++++++..
T Consensus         6 ~~~~~k~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~   83 (126)
T PF00892_consen    6 YSVFSKKLLKKIS-PLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYISASIV   83 (126)
T ss_pred             HHHHHHHHhccCC-HHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhcchhHH
Confidence            5678899999988 99999999999886 433333 22222345566666767777766 46678889999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhhe
Q 017423          132 IVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIY  173 (372)
Q Consensus       132 ~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~  173 (372)
                      +++.++.|+++.+++++++||+ ++++++.+++++++|+.++
T Consensus        84 ~~~~~~~pv~~~i~~~~~~~e~-~~~~~~~g~~l~~~g~~l~  124 (126)
T PF00892_consen   84 SILQYLSPVFAAILGWLFLGER-PSWRQIIGIILIIIGVVLI  124 (126)
T ss_pred             HHHHHHHHHHHHHHHHHHcCCC-CCHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999 9999999999999998865

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.06  E-value=1.2e-09  Score=87.25  Aligned_cols=124  Identities=19%  Similarity=0.354  Sum_probs=93.0

Q ss_pred             HHHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHH
Q 017423          193 VSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISF  272 (372)
Q Consensus       193 ~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (372)
                      ++|+.+.++.|+..++  .++....++....+.+ ..+.....+... .       ..+ +...+....+.++++...++
T Consensus         1 ~~~a~~~~~~k~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~-------~~~-~~~~~~~~~~~~~~~~~~~~   68 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKK--ISPLSITFWRFLIAGI-LLILLLILGRKP-F-------KNL-SPRQWLWLLFLGLLGTALAY   68 (126)
T ss_pred             ceeeeHHHHHHHHhcc--CCHHHHHHHHHHHHHH-HHHHHHhhcccc-c-------cCC-ChhhhhhhhHhhccceehHH
Confidence            4688999999999877  7788888888877654 333322222211 0       111 22234445666666544455


Q ss_pred             -HHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhc
Q 017423          273 -FGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQ  328 (372)
Q Consensus       273 -~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~  328 (372)
                       ..++++++.++...+++.+++|+++.++++++++|++++.+++|+++++.|+++..
T Consensus        69 ~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   69 LLYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             HHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence             47889999999999999999999999999999999999999999999999998753

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>COG2510 Predicted membrane protein [Function unknown]

Probab=98.96  E-value=1.2e-08  Score=79.01  Aligned_cols=121  Identities=15%  Similarity=0.170  Sum_probs=99.0

Q ss_pred             HHHHHHHHHHccCCchHHHHHHHHHHHHHHHHHHhh-cCcccc-cccchhhhHHHHHHHHHHHHHHHHHHHhhhccchhH
Q 017423           53 LLSIINKWAIMKFPYPGALTALQYFTSAAGVLLCGY-FKFLEH-DALELLTVWRFLPAAIIFYLSLFTNSELLLHANVDT  130 (372)
Q Consensus        53 ~~~~~~K~~l~~~~~p~~l~~~r~~~~~i~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~  130 (372)
                      ...+..|..+++.+ |.+-+..|-++..+.++.... .+..+. ..++.|.+..+..-|+....+..+.+.|++.-.+|.
T Consensus        17 L~~iF~KIGl~~vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl~Yf~ALk~G~as~   95 (140)
T COG2510          17 LTPIFAKIGLEGVD-PDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLLYFRALKKGKASR   95 (140)
T ss_pred             HHHHHHHHhccccC-ccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHHHHHHHHhcCCcce
Confidence            45789999999999 999999999777766555433 332222 235666677677777777788889999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheee
Q 017423          131 FIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVL  175 (372)
Q Consensus       131 ~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~  175 (372)
                      ..-+..++|+++++++++++||| ++..+|++++++.+|+.+++.
T Consensus        96 VvPldk~svvl~~lls~lfL~E~-ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          96 VVPLDKTSVVLAVLLSILFLGER-LSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             EEEcccccHHHHHHHHHHHhcCC-CCHHHHHHHHHHHhCeeeEec
Confidence            99999999999999999999999 999999999999999987753

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=98.91  E-value=3.9e-07  Score=81.42  Aligned_cols=214  Identities=12%  Similarity=0.095  Sum_probs=149.8

Q ss_pred             cccch--hhhHHHHHHHHHHHHHHHHHHHhhhccchhHHH-HHHHHHHHHHHHHHHHHcCCCCCCHhHHH----HHHHHh
Q 017423           95 DALEL--LTVWRFLPAAIIFYLSLFTNSELLLHANVDTFI-VFRSAVPIFVAIGETLFLHQPWPSIKTWL----SLATIF  167 (372)
Q Consensus        95 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~-ii~~~~pi~v~~~~~l~l~~~~~~~~~~~----~~~~~~  167 (372)
                      +.++.  +.+..-+..|++-..+....+.+.+++.+|.+. +-..++-+.+.++++++++|- .+..++.    ++++.+
T Consensus        36 p~~~~~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW-~~~~~~~~G~~Al~lii  114 (269)
T PF06800_consen   36 PAFSMSGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEW-TTTTQKIIGFLALVLII  114 (269)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCC-CCcchHHHHHHHHHHHH
Confidence            44443  556666667777788888889999888887773 444667778889999999997 4544433    678888


Q ss_pred             hhhhheeeccccc--------chHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHH
Q 017423          168 GGSVIYVLTDYQF--------TVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELK  239 (372)
Q Consensus       168 ~Gv~l~~~~~~~~--------~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  239 (372)
                      +|+.+.+..|.+.        ...|+...+++.+.|..|.+..|-    .+.++++..+=+.+.-++-..+..+...  .
T Consensus       115 iGv~lts~~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~----~~~~~~~~~lPqaiGm~i~a~i~~~~~~--~  188 (269)
T PF06800_consen  115 IGVILTSYQDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKA----FHVSGWSAFLPQAIGMLIGAFIFNLFSK--K  188 (269)
T ss_pred             HHHHHhccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHh----cCCChhHhHHHHHHHHHHHHHHHhhccc--c
Confidence            9999988765321        235999999999999999999886    3467777766444322211122211111  0


Q ss_pred             HHHHhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchh----hHH
Q 017423          240 KIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWV----GTV  315 (372)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~----~~~  315 (372)
                      .          ......|. =...|++-...+.+++.+.++.+..+.-.+.-+..+++++.|.+++||+-+..    .++
T Consensus       189 ~----------~~~k~~~~-nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~  257 (269)
T PF06800_consen  189 P----------FFEKKSWK-NILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLI  257 (269)
T ss_pred             c----------ccccchHH-hhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHH
Confidence            0          00111122 24567777777887888899999999999999999999999999999987755    557


Q ss_pred             HHHHHHHhhhh
Q 017423          316 GLLICMLGGVM  326 (372)
Q Consensus       316 G~~lil~g~~l  326 (372)
                      |.++++.|.++
T Consensus       258 G~~Liv~G~il  268 (269)
T PF06800_consen  258 GLILIVIGAIL  268 (269)
T ss_pred             HHHHHHHhhhc
Confidence            88888888654

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.90  E-value=1.6e-08  Score=79.53  Aligned_cols=105  Identities=21%  Similarity=0.226  Sum_probs=78.4

Q ss_pred             HHHHHHHHHHHHHHhhcCccc--c-cccchhhhHHHHHHHHHHH-HHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHH
Q 017423           73 ALQYFTSAAGVLLCGYFKFLE--H-DALELLTVWRFLPAAIIFY-LSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETL  148 (372)
Q Consensus        73 ~~r~~~~~i~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~al~~~~~~~~~ii~~~~pi~v~~~~~l  148 (372)
                      .+|+..+.+.+......+.+.  . +.++++++..+...++... ....+.+.++++.+ +....+.++.|+++++++++
T Consensus         2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~   80 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL   80 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence            467777776665544332111  1 1223344445555566654 56788889999999 58889999999999999999


Q ss_pred             HcCCCCCCHhHHHHHHHHhhhhhheeecccc
Q 017423          149 FLHQPWPSIKTWLSLATIFGGSVIYVLTDYQ  179 (372)
Q Consensus       149 ~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~~~  179 (372)
                      ++||| .+++++.+++++++|++++..+|.+
T Consensus        81 ~~~er-~~~~~~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   81 FFKER-LSPRRWLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             HhcCC-CCHHHHHHHHHHHHHHHHHhhhhcc
Confidence            99999 9999999999999999998877653

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.88  E-value=1.3e-07  Score=87.47  Aligned_cols=140  Identities=10%  Similarity=0.061  Sum_probs=100.9

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHH
Q 017423          180 FTVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLP  259 (372)
Q Consensus       180 ~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  259 (372)
                      ....|++++++++++|+...+..|.. .  +.++.++.++...++.+++.+.....++.+.....   ..++   ..+..
T Consensus         5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~--~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~---~~~~---~~~~~   75 (296)
T PRK15430          5 QTRQGVLLALAAYFIWGIAPAYFKLI-Y--YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTL---IQTP---QKIFM   75 (296)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHh-c--CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHH---HcCH---HHHHH
Confidence            44579999999999999999999764 3  47899999999888754333333333332221100   0011   11222


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhc
Q 017423          260 VGLSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQ  328 (372)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~  328 (372)
                      ....++.......+.+++++++++...++..+..|++.+++++++++|+++..+++|+++.+.|+.+..
T Consensus        76 ~~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~  144 (296)
T PRK15430         76 LAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL  144 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence            223333333344458899999999999999999999999999999999999999999999999988654

>TIGR00688 rarD rarD protein

Probab=98.84  E-value=2.3e-07  Score=84.01  Aligned_cols=140  Identities=11%  Similarity=0.057  Sum_probs=102.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHH
Q 017423          183 MAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGL  262 (372)
Q Consensus       183 ~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (372)
                      .|+.++++++++|+...+..|. ..  +.++.++.++-.+++.+++.+.....+......+...   .......+.....
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~--~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~   75 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LK--PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLK---RIQKRPLILSLLL   75 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hc--cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHh---CcccchHHHHHHH
Confidence            4889999999999999999997 43  3889999999988775544433323332211101000   0111112334556


Q ss_pred             HHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhc
Q 017423          263 SCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQ  328 (372)
Q Consensus       263 ~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~  328 (372)
                      .|++......+.+++++++++.+.++..+..|++++++++++++|+++..+++|.++.+.|+.+..
T Consensus        76 ~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~  141 (256)
T TIGR00688        76 CGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI  141 (256)
T ss_pred             HHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence            666655555568889999999999999999999999999999999999999999999999987653

This uncharacterized protein is predicted to have many membrane-spanning domains.

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=98.76  E-value=2.9e-07  Score=76.72  Aligned_cols=218  Identities=11%  Similarity=0.040  Sum_probs=150.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeeccc--cc
Q 017423          103 WRFLPAAIIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDY--QF  180 (372)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~~--~~  180 (372)
                      ++..|.+++-.+..+..-.+++.++++.++.+-.+--.|+.++++..+|.| ....++++.+++++|+++..+.|.  ..
T Consensus        54 ~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~-~~~~kIlaailAI~GiVmiay~DN~~a~  132 (290)
T KOG4314|consen   54 IRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDR-FMGFKILAAILAIGGIVMIAYADNEHAD  132 (290)
T ss_pred             eeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccc-hhhhhHHHHHHHhCcEEEEEeccchhhh
Confidence            344555555555566778899999999999999999999999999999999 899999999999999999998774  45


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHH-----HHHHHHHHHHhhhHHHHHHhhhcccccchhH
Q 017423          181 TVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEA-----LLLFPLELLIMGELKKIKHEMTTASDWYSFE  255 (372)
Q Consensus       181 ~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  255 (372)
                      ++.|+.++.+++...++|-++-|+....-+...  ...+++..+     +.-+|+..+.......+.+    + .   ..
T Consensus       133 e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gd--aa~FmS~LGF~NL~~~~~~~lIL~~T~VE~~qs----F-A---~~  202 (290)
T KOG4314|consen  133 EIIGIACAVGSAFMAALYKVLFKMFIGNANFGD--AAHFMSCLGFFNLCFISFPALILAFTGVEHLQS----F-A---AA  202 (290)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHhccCcchh--HHHHHHHHHHHHHHHHhhhHHHHHHhchHHHHH----H-h---hC
Confidence            789999999999999999999999886633322  222333222     1112333332222121111    0 0   11


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccc
Q 017423          256 VVLPVGLSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQST  331 (372)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~  331 (372)
                      .|..++-.+.+....++.....+..+.|...|+=..........+..++-+-..+.....|..+|..|.++.-...
T Consensus       203 PWG~l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP~  278 (290)
T KOG4314|consen  203 PWGCLCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIPE  278 (290)
T ss_pred             CchhhhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheeccc
Confidence            2333333333334444443344566777777766666666667777777677889999999999999988765543

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.76  E-value=2.5e-07  Score=84.97  Aligned_cols=132  Identities=12%  Similarity=0.021  Sum_probs=93.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHH-HHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHH
Q 017423          185 YSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEA-LLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLS  263 (372)
Q Consensus       185 ~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (372)
                      +++.+.++++++.+.++.|+..++  .++.  .++..... +++.|.... .......        .......+..+...
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~--~~~~--~~~~~~~~~~~l~~~~~~-~~~~~~~--------~~~~~~~~~~~~~~   69 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADK--EPDF--LWWALLAHSVLLTPYGLW-YLAQVGW--------SRLPATFWLLLAIS   69 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCc--hhHH--HHHHHHHHHHHHHHHHHH-hcccCCC--------CCcchhhHHHHHHH
Confidence            567889999999999999988765  3333  24444333 333343321 1100000        11112223345556


Q ss_pred             HHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcc
Q 017423          264 CIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQ  329 (372)
Q Consensus       264 ~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~  329 (372)
                      ++......++.+.++++.++...+++.+..|+++.++++++++|+++..+++|+++++.|+++...
T Consensus        70 ~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~  135 (281)
T TIGR03340        70 AVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL  135 (281)
T ss_pred             HHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence            666666666778899999999999999999999999999999999999999999999999987654

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.63  E-value=2.4e-06  Score=68.40  Aligned_cols=120  Identities=18%  Similarity=0.196  Sum_probs=86.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHH
Q 017423          183 MAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGL  262 (372)
Q Consensus       183 ~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (372)
                      .|+++.+.+.++.+...++.|+=+++.+.  .+.... ..      ...... .                .+.   ..++
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~--~~~~~~-~~------~~~~~~-~----------------~p~---~~i~   52 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLPL--LSHAWD-FI------AALLAF-G----------------LAL---RAVL   52 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCC--ccchhH-HH------HHHHHH-h----------------ccH---HHHH
Confidence            47889999999999999999987766332  111100 00      000000 0                010   1345


Q ss_pred             HHHHHHHHHHH-HHHHhcccchhHHHHHHHHHHHHHHHHHHH--hcCCCCchhhHHHHHHHHHhhhhhcccc
Q 017423          263 SCIFGLAISFF-GFSCRRAISATGFTVLGIVNKLLTVVINLV--IWDKHSTWVGTVGLLICMLGGVMYQQST  331 (372)
Q Consensus       263 ~~~~~~~~~~~-~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~--~~~e~~t~~~~~G~~lil~g~~l~~~~~  331 (372)
                      .|++.+..++. +..++++.+......+....++...+.++.  +|||++|+.+++|+++|++|+++.++.+
T Consensus        53 lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~  124 (129)
T PRK02971         53 LGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT  124 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence            57777777776 778899999999999999888888888885  8999999999999999999999987654

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.53  E-value=6e-06  Score=74.80  Aligned_cols=115  Identities=17%  Similarity=0.050  Sum_probs=86.2

Q ss_pred             HHHHHHHHHccCCc-hHHHHHHHHHHHHHHHHHHhhcCcccccccchhhhHHHHHHHHHH-HHHHHHHHHhhhccchhHH
Q 017423           54 LSIINKWAIMKFPY-PGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIF-YLSLFTNSELLLHANVDTF  131 (372)
Q Consensus        54 ~~~~~K~~l~~~~~-p~~l~~~r~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~al~~~~~~~~  131 (372)
                      ..+..|...++.+. +.....+|+.++.+.+........++ +..+.+.+...+..+++. ..+..+.+.++++.+++.+
T Consensus       143 ~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~  221 (260)
T TIGR00950       143 GTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPN-PQALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAA  221 (260)
T ss_pred             HHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHH
Confidence            46678888876663 34555578888877665554432222 223444555555556554 4567788999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhh
Q 017423          132 IVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGS  170 (372)
Q Consensus       132 ~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv  170 (372)
                      +++.++.|++.++++++++||+ ++..++.+..+++.|+
T Consensus       222 s~~~~~~pv~~~ll~~~~~~E~-~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       222 SILALAEPLVALLLGLLILGET-LSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHhc
Confidence            9999999999999999999999 9999999999999886

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.49  E-value=7.3e-06  Score=77.59  Aligned_cols=137  Identities=17%  Similarity=0.213  Sum_probs=99.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHH-HHHHHHHhhhHHHHHHhhhcccccchhHHHHHHH
Q 017423          183 MAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLL-FPLELLIMGELKKIKHEMTTASDWYSFEVVLPVG  261 (372)
Q Consensus       183 ~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  261 (372)
                      .-+..++..-++|+.+.++.|..++ .++++....+|-..++.++ +|.......+. .     .+..+|   ..+..+.
T Consensus        13 ~~~~~~~~~q~~~~~~~~~~k~a~~-~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~-~-----~~~~~~---~~~~~l~   82 (358)
T PLN00411         13 VFLTAMLATETSVVGISTLFKVATS-KGLNIYPFLGYSYLLASLLLLPSLFFTNRSR-S-----LPPLSV---SILSKIG   82 (358)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHH-CCCCccHHHHHHHHHHHHHHHHHHHHHHHhc-c-----cCcchH---HHHHHHH
Confidence            3455666777899999999999885 4789999888887776433 34332221110 0     000112   2234455


Q ss_pred             HHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHh------cCCCCchhhHHHHHHHHHhhhhhcc
Q 017423          262 LSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVI------WDKHSTWVGTVGLLICMLGGVMYQQ  329 (372)
Q Consensus       262 ~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~------~~e~~t~~~~~G~~lil~g~~l~~~  329 (372)
                      ..|+++...+...++.++++++...+++.++.|+++.++++++      ++|+++..+++|+++.++|+++...
T Consensus        83 l~g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~  156 (358)
T PLN00411         83 LLGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIF  156 (358)
T ss_pred             HHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHH
Confidence            5677774444457788999999999999999999999999999      6999999999999999999987554

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=98.33  E-value=1.1e-05  Score=74.41  Aligned_cols=64  Identities=22%  Similarity=0.210  Sum_probs=56.9

Q ss_pred             HHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheee
Q 017423          111 IFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVL  175 (372)
Q Consensus       111 ~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~  175 (372)
                      .+..+-..+..|+.+.|.+..+=+.+...++.++++..++||| .+++.+.|..+++.|..++..
T Consensus        59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~-~~~~~~~G~~l~i~G~~liv~  122 (300)
T PF05653_consen   59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEK-LTRRDIVGCALIILGSVLIVI  122 (300)
T ss_pred             HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhccc-chHhHHhhHHHHHhhheeeEE
Confidence            3455667888999999999999999999999999999999999 999999999999999886543

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.29  E-value=2.5e-05  Score=61.28  Aligned_cols=71  Identities=11%  Similarity=0.240  Sum_probs=59.1

Q ss_pred             HHHHHHHHHHHHHH-HHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccc
Q 017423          260 VGLSCIFGLAISFF-GFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQST  331 (372)
Q Consensus       260 ~~~~~~~~~~~~~~-~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~  331 (372)
                      .+..|+++...++. +++++++.++ .++....+.|+++.++|+++++|+++...++|.++++.|+++..+.+
T Consensus        37 ~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~  108 (113)
T PF13536_consen   37 LILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSD  108 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhh
Confidence            44456666544444 6678899885 77789999999999999999999999999999999999999887655

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.16  E-value=0.00012  Score=67.71  Aligned_cols=129  Identities=16%  Similarity=0.110  Sum_probs=90.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHHHH
Q 017423          186 SWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCI  265 (372)
Q Consensus       186 ~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (372)
                      +..++-.+.|+...+..|...+  +.++....++-...+.+++.+.......            .......+......|+
T Consensus        11 ~~~~~~~~iWg~~~~~~K~~~~--~~~p~~~~~~R~~~a~l~ll~~~~~~~~------------~~~~~~~~~~~~~~g~   76 (292)
T PRK11272         11 GALFALYIIWGSTYLVIRIGVE--SWPPLMMAGVRFLIAGILLLAFLLLRGH------------PLPTLRQWLNAALIGL   76 (292)
T ss_pred             HHHHHHHHHHhhHHHHHHHHhc--cCCHHHHHHHHHHHHHHHHHHHHHHhCC------------CCCcHHHHHHHHHHHH
Confidence            4455667889999999998765  4889999888887764443333222221            0001112333344555


Q ss_pred             HHHHH-HHHHHHHh-cccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcc
Q 017423          266 FGLAI-SFFGFSCR-RAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQ  329 (372)
Q Consensus       266 ~~~~~-~~~~~~~i-~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~  329 (372)
                      +.... ....+.+. +++++...++..++.|+++.+++++ ++|+++..+++|.++.+.|+.+...
T Consensus        77 ~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~  141 (292)
T PRK11272         77 LLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNS  141 (292)
T ss_pred             HHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhc
Confidence            54333 33355666 8999999999999999999999985 7999999999999999999887754

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.15  E-value=0.00012  Score=65.43  Aligned_cols=141  Identities=9%  Similarity=0.079  Sum_probs=106.2

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHH
Q 017423          181 TVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPV  260 (372)
Q Consensus       181 ~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  260 (372)
                      +..|+++.+.+-+.|+..-.+.|-+ +  +.++.++..|-.+-++++..........+++..+.      ..++..+...
T Consensus         5 ~~~Gil~~l~Ay~lwG~lp~y~kll-~--~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~------~~~p~~~~~~   75 (293)
T COG2962           5 SRKGILLALLAYLLWGLLPLYFKLL-E--PLPATEILAHRVIWSFPFMLALLFLLRQWRELKQL------LKQPKTLLML   75 (293)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHH-c--cCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH------HhCcHHHHHH
Confidence            4579999999999999988888865 3  37788888888877766665655556666665431      2233334444


Q ss_pred             HHHHHHHHHHHHH-HHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccc
Q 017423          261 GLSCIFGLAISFF-GFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQST  331 (372)
Q Consensus       261 ~~~~~~~~~~~~~-~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~  331 (372)
                      ..++++- ..|.. ..|+..+-.....|+=-+++|.+.+++|.++++|+++..|++...+..+|+..-.+..
T Consensus        76 ~l~a~li-~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~  146 (293)
T COG2962          76 ALTALLI-GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLL  146 (293)
T ss_pred             HHHHHHH-HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc
Confidence            4433333 34555 4578899899999999999999999999999999999999999999999998755433

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.15  E-value=0.00013  Score=56.88  Aligned_cols=56  Identities=9%  Similarity=0.039  Sum_probs=51.3

Q ss_pred             HHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcc
Q 017423          274 GFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQ  329 (372)
Q Consensus       274 ~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~  329 (372)
                      ...++++.+.......-++.++.++++|+++|||++|+.+++|+++++.|+++...
T Consensus        54 ~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~  109 (111)
T PRK15051         54 WLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS  109 (111)
T ss_pred             HHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            55678999999999999999999999999999999999999999999999987653

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.13  E-value=0.00018  Score=66.48  Aligned_cols=117  Identities=18%  Similarity=0.162  Sum_probs=79.9

Q ss_pred             HHHHHHHHHccCCchHHHHHHHHHHHHHHHHHHhhcCcccccccchhhhHHHHHHHHHH-HHHHHHHHHhhhccchhHHH
Q 017423           54 LSIINKWAIMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIF-YLSLFTNSELLLHANVDTFI  132 (372)
Q Consensus        54 ~~~~~K~~l~~~~~p~~l~~~r~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~al~~~~~~~~~  132 (372)
                      +.+..|...++.+ |..... ++.++.+.+........ .....++..+...+..+++. .....+.+.++++.+++.++
T Consensus       163 ~~v~~r~~~~~~~-~~~~~~-~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as  239 (293)
T PRK10532        163 YILSGQRAGAEHG-PATVAI-GSLIAALIFVPIGALQA-GEALWHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFG  239 (293)
T ss_pred             HHHHHHHHhccCC-chHHHH-HHHHHHHHHHHHHHHcc-CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHH
Confidence            4566676766666 555544 44444443333322211 11122333333334455543 34466789999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhhee
Q 017423          133 VFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYV  174 (372)
Q Consensus       133 ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~  174 (372)
                      ++..+.|++..++++++++|+ ++..++++.+++++|++...
T Consensus       240 ~~~~l~Pv~a~l~~~l~lgE~-~~~~~~iG~~lIl~~~~~~~  280 (293)
T PRK10532        240 TLMSMEPALAAVSGMIFLGET-LTLIQWLALGAIIAASMGST  280 (293)
T ss_pred             HHHHhHHHHHHHHHHHHhCCC-CcHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999 99999999999999987664

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.13  E-value=0.00018  Score=68.29  Aligned_cols=133  Identities=11%  Similarity=0.050  Sum_probs=94.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccCCC-chhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccc-hhHHHHHHHHH
Q 017423          186 SWALAYLVSMTIDFVYIKHVVMTIGLN-TWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWY-SFEVVLPVGLS  263 (372)
Q Consensus       186 ~~~l~a~~~~a~~~i~~k~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~  263 (372)
                      .+++.--.+...++++.|..++.  .+ |+.+..++.+.+.++...... .+ ...       .+... ....+..++..
T Consensus        52 ~~~~~wy~~s~~~~~~nK~vl~~--~~~P~~l~~~~~~~~~l~~~~~~~-~~-~~~-------~~~~~~~~~~~~~llp~  120 (350)
T PTZ00343         52 LLFLTWYALNVLYVVDNKLALNM--LPLPWTISSLQLFVGWLFALLYWA-TG-FRK-------IPRIKSLKLFLKNFLPQ  120 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHh--CChhHHHHHHHHHHHHHHHHHHHH-hC-CCC-------CCCCCCHHHHHHHHHHH
Confidence            33333334445568889998877  55 888888887776433222211 11 100       01111 11234456677


Q ss_pred             HHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcc
Q 017423          264 CIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQ  329 (372)
Q Consensus       264 ~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~  329 (372)
                      |+++.......+.++++++++.++++..+.|++++++++++++|+++..+++|++++++|+++...
T Consensus       121 gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~  186 (350)
T PTZ00343        121 GLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASV  186 (350)
T ss_pred             HHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheec
Confidence            777776655567889999999999999999999999999999999999999999999999998653

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.10  E-value=0.00014  Score=67.24  Aligned_cols=117  Identities=18%  Similarity=0.171  Sum_probs=78.9

Q ss_pred             HHHHHHHHHccCCchHHHHHHHHHHHHHHHHHHhhcCcccccccchhhhHHHHHHHHHHHHHHHHHHHhhhccchhHHHH
Q 017423           54 LSIINKWAIMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIFYLSLFTNSELLLHANVDTFIV  133 (372)
Q Consensus        54 ~~~~~K~~l~~~~~p~~l~~~r~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~i  133 (372)
                      +.+.+|...++.+ |....  ....+.. +..............+++.+...+..++.......+.+.++++.+++.+++
T Consensus       171 ~~v~~k~~~~~~~-~~~~~--~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~  246 (295)
T PRK11689        171 YCNVTRKYARGKN-GITLF--FILTALA-LWIKYFLSPQPAMVFSLPAIIKLLLAAAAMGFGYAAWNVGILHGNMTLLAT  246 (295)
T ss_pred             HHHHHhhccCCCC-chhHH--HHHHHHH-HHHHHHHhcCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHH
Confidence            4566666665555 54332  2222222 222122211111223444454455455444556778899999999999999


Q ss_pred             HHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheee
Q 017423          134 FRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVL  175 (372)
Q Consensus       134 i~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~  175 (372)
                      +.++.|++.+++++++++|+ ++..++++.++++.|+.+...
T Consensus       247 ~~~l~Pv~a~i~~~~~lgE~-~~~~~~iG~~lI~~gv~~~~~  287 (295)
T PRK11689        247 ASYFTPVLSAALAALLLSTP-LSFSFWQGVAMVTAGSLLCWL  287 (295)
T ss_pred             HHHhHHHHHHHHHHHHhCCC-CcHHHHHHHHHHHHhHHHHhh
Confidence            99999999999999999999 999999999999999876543

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.08  E-value=0.00014  Score=56.73  Aligned_cols=62  Identities=24%  Similarity=0.311  Sum_probs=56.3

Q ss_pred             HHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhhee
Q 017423          112 FYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYV  174 (372)
Q Consensus       112 ~~~~~~~~~~al~~~~~~~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~  174 (372)
                      +....++...+++..|.+.+..+.++.++++++++++++||+ .++++++++.++++|++++.
T Consensus        47 ~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~-ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         47 LGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEP-VSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHHHHHh
Confidence            444577778889999999999999999999999999999999 99999999999999998764

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.98  E-value=0.013  Score=54.78  Aligned_cols=231  Identities=11%  Similarity=-0.065  Sum_probs=131.3

Q ss_pred             chhhhHHHHHHHHHHHHHHHHHHHhhhccchhHH-HHHHHHHHHHHHHHHHHHcCCCC------CCHhHHHHHHHHhhhh
Q 017423           98 ELLTVWRFLPAAIIFYLSLFTNSELLLHANVDTF-IVFRSAVPIFVAIGETLFLHQPW------PSIKTWLSLATIFGGS  170 (372)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~-~ii~~~~pi~v~~~~~l~l~~~~------~~~~~~~~~~~~~~Gv  170 (372)
                      +.+.+..-+..|++-..+......+.+++.+|.. -+...++-++..++..++++|-.      -.....+++++.++|+
T Consensus        69 ~~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi  148 (345)
T PRK13499         69 SGSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGV  148 (345)
T ss_pred             CHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHH
Confidence            3344444455566666777778888999888887 45566777788888888877531      1133566788899999


Q ss_pred             hheee----ccc--------ccc-hHHHHHHHHHHHHHHHHHH-------HHHHHhhccCCCchhHHHHHhH---HH-HH
Q 017423          171 VIYVL----TDY--------QFT-VMAYSWALAYLVSMTIDFV-------YIKHVVMTIGLNTWGLVLYNNL---EA-LL  226 (372)
Q Consensus       171 ~l~~~----~~~--------~~~-~~G~~~~l~a~~~~a~~~i-------~~k~~~~~~~~~~~~~~~~~~~---~~-~~  226 (372)
                      ++.+.    .|.        +++ ..|+++++++.+.+++|+.       ..+.. .+.+.+++....-+..   .+ ++
T Consensus       149 ~l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a-~~~g~~~~~~~lp~~~~~~~G~~~  227 (345)
T PRK13499        149 AIVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAA-AALGVDPLYAALPSYVVIMGGGAI  227 (345)
T ss_pred             HHHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhh-hhcCCCchHHHHHHHHHHHHHHHH
Confidence            98876    332        122 4599999999999999993       33322 1223444332222211   11 11


Q ss_pred             HHHHHHHHhhhHHHHHHhhhcccccch--hHHHHHHHHHHHHHHHHHHHHHHHhcccchhHH----HHHHHHHHHHHHHH
Q 017423          227 LFPLELLIMGELKKIKHEMTTASDWYS--FEVVLPVGLSCIFGLAISFFGFSCRRAISATGF----TVLGIVNKLLTVVI  300 (372)
Q Consensus       227 ~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~----s~~~~l~~v~~~~l  300 (372)
                      ..+.+-.....-........+...-..  ..-.+.....|++-...++.+...-++.+....    .+-+-..-+++.+.
T Consensus       228 ~n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~Viistlw  307 (345)
T PRK13499        228 TNLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLW  307 (345)
T ss_pred             HHHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHh
Confidence            111111100000000000000011000  112223345566666666666666566643322    23335666889999


Q ss_pred             HHHhcCCCCc------hhhHHHHHHHHHhhhhhccc
Q 017423          301 NLVIWDKHST------WVGTVGLLICMLGGVMYQQS  330 (372)
Q Consensus       301 s~~~~~e~~t------~~~~~G~~lil~g~~l~~~~  330 (372)
                      |. +++|.=+      ...++|.+++++|..+....
T Consensus       308 Gi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~  342 (345)
T PRK13499        308 GL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGLG  342 (345)
T ss_pred             hh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence            99 5999777      77899999999998876543

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=97.95  E-value=0.0002  Score=66.12  Aligned_cols=132  Identities=12%  Similarity=0.095  Sum_probs=91.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHH
Q 017423          184 AYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLS  263 (372)
Q Consensus       184 G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (372)
                      |++++++++++|+...+..|+..   +.++.+.. . ...+..++........+           +.......+..-..+
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~~---g~~~~~~~-~-~~~g~l~~~~~~~~~~~-----------~~~~~~~~~~~g~l~   65 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKIG---GGPYSQTL-G-TTFGALILSIAIAIFVL-----------PEFWALSIFLVGLLS   65 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhccC---CCHHHHHH-H-HHHHHHHHHHHHHHHhC-----------CcccccHHHHHHHHH
Confidence            67899999999999999999864   34343332 1 22232233332222111           011112233334455


Q ss_pred             HHHHHHHHHHHHHHhcccchhHHHHHHH-HHHHHHHHHHHHhcCCCCchhh----HHHHHHHHHhhhhhcccc
Q 017423          264 CIFGLAISFFGFSCRRAISATGFTVLGI-VNKLLTVVINLVIWDKHSTWVG----TVGLLICMLGGVMYQQST  331 (372)
Q Consensus       264 ~~~~~~~~~~~~~~i~~~~a~~~s~~~~-l~~v~~~~ls~~~~~e~~t~~~----~~G~~lil~g~~l~~~~~  331 (372)
                      |++-...++.++.++++.+.+..-.+.+ +.++++++++.++|||+.+..+    .+|.++++.|.++....+
T Consensus        66 G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~  138 (290)
T TIGR00776        66 GAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSK  138 (290)
T ss_pred             HHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEecc
Confidence            6666666677889999999999977777 8888999999999999999999    999999999999876554

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=97.95  E-value=0.00035  Score=64.81  Aligned_cols=124  Identities=12%  Similarity=0.034  Sum_probs=86.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHHHH
Q 017423          186 SWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCI  265 (372)
Q Consensus       186 ~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (372)
                      ++.++++++|+...+..|...++  .++....++-..++.+.+.+.  ...+          ...+.      .+...|+
T Consensus         7 l~~l~~~~~Wg~~~~~~k~~~~~--~~p~~~~~~R~~~a~~~l~~~--~~~~----------~~~~~------~~~~~g~   66 (299)
T PRK11453          7 VLALLVVVVWGLNFVVIKVGLHN--MPPLMLAGLRFMLVAFPAIFF--VARP----------KVPLN------LLLGYGL   66 (299)
T ss_pred             HHHHHHHHHHhhhHHHHHHHHhc--CCHHHHHHHHHHHHHHHHHHH--hcCC----------CCchH------HHHHHHH
Confidence            55788899999999999987765  889888888876643221111  1110          00111      1222233


Q ss_pred             HHHHHHHH-HHHHhcc-cchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcc
Q 017423          266 FGLAISFF-GFSCRRA-ISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQ  329 (372)
Q Consensus       266 ~~~~~~~~-~~~~i~~-~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~  329 (372)
                      ......+. .+.++++ .++...+++.+..|+++.++++++++|+++..+++|.++.++|+.+...
T Consensus        67 ~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~  132 (299)
T PRK11453         67 TISFGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIE  132 (299)
T ss_pred             HHHHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhcc
Confidence            33333332 4455665 5788999999999999999999999999999999999999999887664

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=97.95  E-value=7.7e-05  Score=67.39  Aligned_cols=214  Identities=9%  Similarity=0.071  Sum_probs=119.1

Q ss_pred             HHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeecccccc---------
Q 017423          111 IFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDYQFT---------  181 (372)
Q Consensus       111 ~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~~~~~---------  181 (372)
                      ....+=..++.|+.|.|.+..+-+.+++.+..++++..+++|| .++...++..+++.|..++....+..+         
T Consensus        73 tm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ek-l~~~g~lGc~l~v~Gst~iV~haP~e~~i~t~~el~  151 (335)
T KOG2922|consen   73 TMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEK-LNLLGILGCVLCVVGSTTIVIHAPKEQEIESVEEVW  151 (335)
T ss_pred             HHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHH-HHHhhhhheeEEecccEEEEEecCcccccccHHHHH
Confidence            3456667889999999999999999999999999999999999 899999999999999887655432110         


Q ss_pred             ----hHHH-HHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHH-HHHHH--HHhhhHHHHHHhhhcccccch
Q 017423          182 ----VMAY-SWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLL-FPLEL--LIMGELKKIKHEMTTASDWYS  253 (372)
Q Consensus       182 ----~~G~-~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~g~~~~~~~~~~~~~~~~~  253 (372)
                          -.++ +++.+-.+...+-..+.+.   +++  ..-++.|..+.+++- +.+..  .+.+-.....   ........
T Consensus       152 ~~~~~~~Fliy~~~iil~~~il~~~~~p---~~g--~tnilvyi~i~s~iGS~tV~svKalg~aiklt~---~g~~ql~~  223 (335)
T KOG2922|consen  152 ELATEPGFLVYVIIIILIVLILIFFYAP---RYG--QTNILVYIGICSLIGSLTVMSVKALGIAIKLTF---SGNNQLFY  223 (335)
T ss_pred             HHhcCccHHHHHHHHHHHHHHHheeecc---ccc--ccceeehhhHhhhhcceeeeeHHHHHHHHHHHh---cCCccccc
Confidence                0121 1111111111111111121   111  111223333333210 00000  0000001110   00111222


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHH-HHHHHHHHHHHHhcCC--CCch----hhHHHHHHHHHhhhh
Q 017423          254 FEVVLPVGLSCIFGLAISFFGFSCRRAISATGFTVLGI-VNKLLTVVINLVIWDK--HSTW----VGTVGLLICMLGGVM  326 (372)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~-l~~v~~~~ls~~~~~e--~~t~----~~~~G~~lil~g~~l  326 (372)
                      +..|..++....+....-.....+++..++..++...| +=..++++.|.++|+|  ..+.    ....|+..++.|+++
T Consensus       224 ~~ty~~~l~~~~~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~ti~~G~fl  303 (335)
T KOG2922|consen  224 PLTWIFLLVVATCVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFVTIFLGIFL  303 (335)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHHHhhheeeE
Confidence            23344444444444433333556788887777776666 3456667778888887  3343    346788889999998


Q ss_pred             hcccccC
Q 017423          327 YQQSTSN  333 (372)
Q Consensus       327 ~~~~~~~  333 (372)
                      ....|+.
T Consensus       304 L~~~kd~  310 (335)
T KOG2922|consen  304 LHRTKDM  310 (335)
T ss_pred             eeeeccc
Confidence            8766533

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=97.85  E-value=0.00088  Score=62.16  Aligned_cols=123  Identities=11%  Similarity=-0.032  Sum_probs=83.1

Q ss_pred             HHHHHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHHHH
Q 017423          195 MTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAISFFG  274 (372)
Q Consensus       195 ~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (372)
                      ...++++.|+.+++. ..|..+.+.+...+.+...+. ...+.        ...... +...+..+...|++........
T Consensus        14 ~~~~~~~NK~~l~~~-~~P~~~~~~~~~~~~~~~~~~-~~~~~--------~~~~~~-~~~~~~~~~~~g~~~~~~~~~~   82 (302)
T TIGR00817        14 NVYFNIYNKKLLNVF-PYPYFKTLISLAVGSLYCLLS-WSSGL--------PKRLKI-SSALLKLLLPVAIVHTIGHVTS   82 (302)
T ss_pred             HHHHHHHHHHHHhhC-ChhHHHHHHHHHHHHHHHHHH-HHhCC--------CCCCCC-CHHHHHHHHHHHHHHHHHHHHH
Confidence            334567888888652 346666666655543222111 10110        000111 1122444556676665554457


Q ss_pred             HHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhc
Q 017423          275 FSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQ  328 (372)
Q Consensus       275 ~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~  328 (372)
                      +++++++++...+++..+.|+++.++++++++|+++..+++|.+++++|+++..
T Consensus        83 ~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~  136 (302)
T TIGR00817        83 NVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALAS  136 (302)
T ss_pred             HHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhc
Confidence            889999999999999999999999999999999999999999999999998754

specificities overlap.

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=97.76  E-value=0.0024  Score=52.68  Aligned_cols=121  Identities=14%  Similarity=0.167  Sum_probs=84.1

Q ss_pred             HHHHHHHHHHcc-----CCc-hHHHHHHHHHHHHHHHHHHhhc-Cccccc----cc-------chhhhHHHHHHHHHHHH
Q 017423           53 LLSIINKWAIMK-----FPY-PGALTALQYFTSAAGVLLCGYF-KFLEHD----AL-------ELLTVWRFLPAAIIFYL  114 (372)
Q Consensus        53 ~~~~~~K~~l~~-----~~~-p~~l~~~r~~~~~i~~~~~~~~-~~~~~~----~~-------~~~~~~~~~~~~~~~~~  114 (372)
                      ...+..|..+++     .+. +..+..+....+.+++.+.... +..+..    ..       +.+....++..+++...
T Consensus        14 l~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (153)
T PF03151_consen   14 LRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLLILSGLLAFL   93 (153)
T ss_pred             HHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHHHHHHHHHHH
Confidence            355666666654     222 6777766666666665554332 221110    01       11223344444555555


Q ss_pred             HHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhhee
Q 017423          115 SLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYV  174 (372)
Q Consensus       115 ~~~~~~~al~~~~~~~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~  174 (372)
                      .....+..++++++-+.+++.....+++.+++.++++|+ .+..++.|+++.+.|+.+.+
T Consensus        94 ~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~-~t~~~~~G~~l~~~G~~~Ys  152 (153)
T PF03151_consen   94 YNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEP-ITPLQIIGIVLALVGVLLYS  152 (153)
T ss_pred             HHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCc-CCHHHHHHHHHHHHHHheee
Confidence            677778889999999999999999999999999999999 99999999999999987653

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.69  E-value=0.0016  Score=60.41  Aligned_cols=129  Identities=12%  Similarity=0.055  Sum_probs=87.5

Q ss_pred             HHHHHHHHHHHHhhccCCC--chhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHH
Q 017423          194 SMTIDFVYIKHVVMTIGLN--TWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSCIFGLAIS  271 (372)
Q Consensus       194 ~~a~~~i~~k~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (372)
                      ++..+.++++++.++...+  ++.+.+.+.....+..........      .   ......+   +--....+++..+..
T Consensus        11 ~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~------~---~~~~~~~---~~~~~~~~~~~~~~~   78 (303)
T PF08449_consen   11 GCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFK------F---PKSRKIP---LKKYAILSFLFFLAS   78 (303)
T ss_pred             HHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcc------c---cCCCcCh---HHHHHHHHHHHHHHH
Confidence            3444667889888765544  666666665444332222221111      0   0011111   112233355555556


Q ss_pred             HHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccccCC
Q 017423          272 FFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQSTSNK  334 (372)
Q Consensus       272 ~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~~~~  334 (372)
                      ...+.++++++..+..++-..+++.+.+++.++++++.+..++++.+++.+|++++...+.+.
T Consensus        79 ~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~  141 (303)
T PF08449_consen   79 VLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSS  141 (303)
T ss_pred             HHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccccc
Confidence            667788999999999999999999999999999999999999999999999999988766443

; GO: 0055085 transmembrane transport

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.52  E-value=0.00085  Score=52.80  Aligned_cols=66  Identities=14%  Similarity=0.245  Sum_probs=50.6

Q ss_pred             HHHHHHHH-HHHHhcccchhH-HHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccc
Q 017423          266 FGLAISFF-GFSCRRAISATG-FTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQST  331 (372)
Q Consensus       266 ~~~~~~~~-~~~~i~~~~a~~-~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~  331 (372)
                      ..+..++. ...++|+.+... +++..-+..+.++++|+++|+|++|+.+++|+++++.|++..+...
T Consensus        38 ~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         38 VMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence            33334443 445677776554 3455568889999999999999999999999999999999876554

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=97.49  E-value=0.0074  Score=55.10  Aligned_cols=140  Identities=14%  Similarity=0.067  Sum_probs=89.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHH
Q 017423          182 VMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVG  261 (372)
Q Consensus       182 ~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  261 (372)
                      ..+....+...+.++......|...+. ..+.....++....+.+. ...   ....... .   .......  .+...+
T Consensus         6 ~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~-~---~~~~~~~--~~~~~~   74 (292)
T COG0697           6 LLGLLALLLWGLLWGLSFIALKLAVES-LDPFLFAAALRFLIAALL-LLP---LLLLEPR-G---LRPALRP--WLLLLL   74 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcc-cCChHHHHHHHHHHHHHH-HHH---HHHhhcc-c---ccccccc--hHHHHH
Confidence            356777777778888888888877654 233334444344333322 111   1111100 0   0001111  122233


Q ss_pred             HHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHH-HhcCCCCchhhHHHHHHHHHhhhhhccccc
Q 017423          262 LSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINL-VIWDKHSTWVGTVGLLICMLGGVMYQQSTS  332 (372)
Q Consensus       262 ~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~-~~~~e~~t~~~~~G~~lil~g~~l~~~~~~  332 (372)
                      ..++......+..+.+++++++.......+..|++..++++ ++++|+++..+++|..+.+.|+++......
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~  146 (292)
T COG0697          75 LALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGG  146 (292)
T ss_pred             HHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCC
Confidence            33444444444577789999999999999999999999997 677999999999999999999998877653

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.41  E-value=0.0016  Score=50.53  Aligned_cols=67  Identities=12%  Similarity=0.180  Sum_probs=51.7

Q ss_pred             HHHHHHHHH-HHHHhcccchhH-HHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccc
Q 017423          265 IFGLAISFF-GFSCRRAISATG-FTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQST  331 (372)
Q Consensus       265 ~~~~~~~~~-~~~~i~~~~a~~-~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~  331 (372)
                      +.++..++. ...++++.+... +++..-+..+.++++|+++|+|++|+.+++|+++++.|++..+...
T Consensus        37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            334444444 345677776554 4555668889999999999999999999999999999999987554

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.39  E-value=0.013  Score=47.65  Aligned_cols=131  Identities=15%  Similarity=0.191  Sum_probs=91.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHHH
Q 017423          185 YSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLSC  264 (372)
Q Consensus       185 ~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (372)
                      .++.+.+-.+-+++..+.-++.++.+ +++...+.+...+.+......+..++. +.       ....+..+|  ....|
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~~~~g-s~~~as~i~~~~G~i~~~i~~~~~~~~-~~-------~~~~~~p~w--~~lGG   71 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLGKALG-SPLVASFISFGVGFILLLIILLITGRP-SL-------ASLSSVPWW--AYLGG   71 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhC-ccHHHHHHHHHHHHHHHHHHHHHhccc-cc-------chhccCChH--HhccH
Confidence            45677777888888888888877633 588877777777765555554444432 11       112122223  33488


Q ss_pred             HHHHHHHHHHHHHhcccchhHHHHHHHHHHHH-HHHHHHH-hc---CCCCchhhHHHHHHHHHhhhh
Q 017423          265 IFGLAISFFGFSCRRAISATGFTVLGIVNKLL-TVVINLV-IW---DKHSTWVGTVGLLICMLGGVM  326 (372)
Q Consensus       265 ~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~-~~~ls~~-~~---~e~~t~~~~~G~~lil~g~~l  326 (372)
                      +++..+-++....+.+.++.....+....+++ +.+++.+ +|   ++++++...+|.++++.|+++
T Consensus        72 ~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   72 LLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            99988888888889999999988887766554 4566665 23   368999999999999999864

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=97.38  E-value=0.001  Score=59.52  Aligned_cols=74  Identities=16%  Similarity=0.250  Sum_probs=65.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhccccc
Q 017423          259 PVGLSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQSTS  332 (372)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~~  332 (372)
                      .+..-+++-.+.+...|.++++.+|.+..+..-.|.+++.++++++++.+++..||+++.+...|+.+......
T Consensus        19 ~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~   92 (244)
T PF04142_consen   19 KLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSS   92 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCc
Confidence            34556667777788888999999999999999999999999999999999999999999999999998876553

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=97.34  E-value=0.0072  Score=56.47  Aligned_cols=70  Identities=17%  Similarity=0.406  Sum_probs=64.5

Q ss_pred             HHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccc
Q 017423          262 LSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQST  331 (372)
Q Consensus       262 ~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~  331 (372)
                      ..+++-...++....+.++++.+...++.....+++.++|+++++++.++.+++|++++++|+.+.....
T Consensus        84 lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD  153 (334)
T PF06027_consen   84 LLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSD  153 (334)
T ss_pred             HHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeec
Confidence            3478888889999999999999999999999999999999999999999999999999999998876655

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.23  E-value=0.011  Score=55.43  Aligned_cols=139  Identities=14%  Similarity=0.156  Sum_probs=90.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHH-hHHHHHHHHHHH--HHhhhHHHHHHhhhcccccchhHHHH
Q 017423          182 VMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYN-NLEALLLFPLEL--LIMGELKKIKHEMTTASDWYSFEVVL  258 (372)
Q Consensus       182 ~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~  258 (372)
                      ..|+++++++++|++.+.+-+|+ .|+   -+|+..+-. .+++-++.|...  +..+++.+..+      .. +...+.
T Consensus         6 ~~G~~~~~i~~~~~GS~~~p~K~-~k~---w~wE~~W~v~gi~~wl~~~~~~g~~~~~~f~~~~~------~~-~~~~~~   74 (345)
T PRK13499          6 ILGIIWHLIGGASSGSFYAPFKK-VKK---WSWETMWSVGGIFSWLILPWLIAALLLPDFWAYYS------SF-SGSTLL   74 (345)
T ss_pred             HHHHHHHHHHHHHhhcccccccc-cCC---CchhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH------hc-CHHHHH
Confidence            47999999999999999999887 332   344444211 112223334221  11222222211      11 233455


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcccchhHHHHHHH-HHHHHHHHHHHHhcCCCC-------chhhHHHHHHHHHhhhhhccc
Q 017423          259 PVGLSCIFGLAISFFGFSCRRAISATGFTVLGI-VNKLLTVVINLVIWDKHS-------TWVGTVGLLICMLGGVMYQQS  330 (372)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~-l~~v~~~~ls~~~~~e~~-------t~~~~~G~~lil~g~~l~~~~  330 (372)
                      ....+|++-.+-+..++..+++.+-+..-.+.. ++-+.+++++.+++||-.       .....+|.+++++|+++..+.
T Consensus        75 ~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~A  154 (345)
T PRK13499         75 PVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRA  154 (345)
T ss_pred             HHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHh
Confidence            566778887777888888888888766555444 788899999999998643       245788999999999998773


Q ss_pred             c
Q 017423          331 T  331 (372)
Q Consensus       331 ~  331 (372)
                      -
T Consensus       155 g  155 (345)
T PRK13499        155 G  155 (345)
T ss_pred             h
Confidence            3

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.22  E-value=0.0035  Score=50.24  Aligned_cols=66  Identities=20%  Similarity=0.152  Sum_probs=57.5

Q ss_pred             HHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHH--HcCCCCCCHhHHHHHHHHhhhhhheeecc
Q 017423          111 IFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETL--FLHQPWPSIKTWLSLATIFGGSVIYVLTD  177 (372)
Q Consensus       111 ~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~v~~~~~l--~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~  177 (372)
                      .+.....+.+.+++..+.+.+.-+.+..+.++.+.++.  ++||+ .++.++++++++++|+.++..++
T Consensus        57 ~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~-ls~~~~iGi~lIi~GV~lv~~~~  124 (129)
T PRK02971         57 GYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNET-FSLKKTLGVACIMLGVWLINLPT  124 (129)
T ss_pred             HHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCC-CCHHHHHHHHHHHHHHHHhccCC
Confidence            35566788999999999999999999999888888874  79999 99999999999999999876543

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.11  E-value=0.014  Score=45.09  Aligned_cols=64  Identities=11%  Similarity=0.131  Sum_probs=54.4

Q ss_pred             HHHHHHHHHHHHHhhhccchhHH-HHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhhe
Q 017423          109 AIIFYLSLFTNSELLLHANVDTF-IVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIY  173 (372)
Q Consensus       109 ~~~~~~~~~~~~~al~~~~~~~~-~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~  173 (372)
                      .+.+..+.++-..+++.+|.+.+ .+.....-+.+.+.+.+++||+ .++.++.++.+++.|+...
T Consensus        42 ~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~-~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         42 LAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQR-LNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCC-CCHHHHHHHHHHHHHHHHh
Confidence            34455567777888999999988 6667788899999999999999 9999999999999998864

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.04  E-value=0.0051  Score=48.40  Aligned_cols=69  Identities=14%  Similarity=0.168  Sum_probs=58.3

Q ss_pred             HHHHHHHHHHHHHHHHhhhccchhHHHHH-HHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheee
Q 017423          106 LPAAIIFYLSLFTNSELLLHANVDTFIVF-RSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVL  175 (372)
Q Consensus       106 ~~~~~~~~~~~~~~~~al~~~~~~~~~ii-~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~  175 (372)
                      ....+.+..++++...+++++|.+.+..+ ....-+.+++++.+++||+ .+..+++++.++++|+..+-.
T Consensus        34 ~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~-~s~~~~~gi~lIi~GVi~l~l  103 (120)
T PRK10452         34 ILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDES-LSLMKIAGLTTLVAGIVLIKS  103 (120)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHHHHhhc
Confidence            33444566677788889999999998655 6789999999999999999 999999999999999987644

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.01  E-value=0.0073  Score=46.01  Aligned_cols=64  Identities=11%  Similarity=0.269  Sum_probs=51.0

Q ss_pred             HHHHHH-HHHHhcccchh-HHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccc
Q 017423          268 LAISFF-GFSCRRAISAT-GFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQST  331 (372)
Q Consensus       268 ~~~~~~-~~~~i~~~~a~-~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~  331 (372)
                      ...+|. .-.++|+.+-. -+++..-+..+.+++.|+++|+|++++.+++|+.++++|++..+...
T Consensus        40 ~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~s  105 (106)
T COG2076          40 YGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLGS  105 (106)
T ss_pred             HHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhcC
Confidence            333443 33567777644 46788889999999999999999999999999999999999876543

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=96.96  E-value=0.00028  Score=61.34  Aligned_cols=218  Identities=8%  Similarity=0.048  Sum_probs=140.8

Q ss_pred             cccchhhhHHHHHHHHHHHHHHHHHHHhhhccchhHHH-HHHHHHHHHHHHHHHHHcCCCCCCHhH-H---HHHHHHhhh
Q 017423           95 DALELLTVWRFLPAAIIFYLSLFTNSELLLHANVDTFI-VFRSAVPIFVAIGETLFLHQPWPSIKT-W---LSLATIFGG  169 (372)
Q Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~-ii~~~~pi~v~~~~~l~l~~~~~~~~~-~---~~~~~~~~G  169 (372)
                      |..+.+.+..-+.-|++-..+...++.+.+++.+|.+. +-..++-+-+.+++++.+||- .+..+ .   .++++.+.|
T Consensus        52 p~~T~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW-~t~~~~IlG~iAliliviG  130 (288)
T COG4975          52 PELTLTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEW-TTPTQIILGFIALILIVIG  130 (288)
T ss_pred             CccchhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEecc-CcchhHHHHHHHHHHHHHh
Confidence            44455555544555555566777788898888888773 344556667778899999997 55444 3   357888899


Q ss_pred             hhheeeccc---c-----cchHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHH
Q 017423          170 SVIYVLTDY---Q-----FTVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKI  241 (372)
Q Consensus       170 v~l~~~~~~---~-----~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  241 (372)
                      +.+.++.|.   +     ..-.|+...+.+.+.|-.|.+..|..    +.+.++...-++..-++.........+|    
T Consensus       131 ~~lTs~~~~~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f----~v~g~saiLPqAiGMv~~ali~~~~~~~----  202 (288)
T COG4975         131 IYLTSKQDRNNKEEENPSNLKKGIVILLISTLGYVGYVVLFQLF----DVDGLSAILPQAIGMVIGALILGFFKME----  202 (288)
T ss_pred             heEeeeeccccccccChHhhhhheeeeeeeccceeeeEeeeccc----cccchhhhhHHHHHHHHHHHHHhhcccc----
Confidence            999887663   1     12348888999999999999988864    3556665554543222111111111111    


Q ss_pred             HHhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhh----HHHH
Q 017423          242 KHEMTTASDWYSFEVVLPVGLSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVG----TVGL  317 (372)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~----~~G~  317 (372)
                              .......|. =...|++-...|...+.+.++.+-.+.=.+.-+--+++++-|.++++|+-|..+    ++|+
T Consensus       203 --------~~~~K~t~~-nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGi  273 (288)
T COG4975         203 --------KRFNKYTWL-NIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGI  273 (288)
T ss_pred             --------cchHHHHHH-HHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhH
Confidence                    001111222 234466656667777777777777766666667788999999999999888766    4688


Q ss_pred             HHHHHhhhhhccc
Q 017423          318 LICMLGGVMYQQS  330 (372)
Q Consensus       318 ~lil~g~~l~~~~  330 (372)
                      ++++.|..+....
T Consensus       274 ilivvgai~lg~~  286 (288)
T COG4975         274 ILIVVGAILLGIA  286 (288)
T ss_pred             HHHHHHhhhhhee
Confidence            8888887665443

>PRK11431 multidrug efflux system protein; Provisional

Probab=96.96  E-value=0.017  Score=44.34  Aligned_cols=65  Identities=22%  Similarity=0.139  Sum_probs=55.3

Q ss_pred             HHHHHHHHHHHHHhhhccchhHH-HHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhhee
Q 017423          109 AIIFYLSLFTNSELLLHANVDTF-IVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYV  174 (372)
Q Consensus       109 ~~~~~~~~~~~~~al~~~~~~~~-~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~  174 (372)
                      .+.+..+.++-..+++.+|.+.+ .+......+.+.+.+++++||+ .++.+++++.+++.|++.+-
T Consensus        36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~-~~~~~~~gi~lIi~GVv~l~  101 (105)
T PRK11431         36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGES-ASPARLLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHHHhhh
Confidence            34455567777888999999988 6667789999999999999999 99999999999999998763

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=96.89  E-value=0.0099  Score=45.96  Aligned_cols=62  Identities=16%  Similarity=0.290  Sum_probs=49.0

Q ss_pred             HHHHHHH-HHHHhcccchh-HHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhc
Q 017423          267 GLAISFF-GFSCRRAISAT-GFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQ  328 (372)
Q Consensus       267 ~~~~~~~-~~~~i~~~~a~-~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~  328 (372)
                      ++..++. ...++|+.+.. .+++..-+..+.+++.|+++|+|++|+.+++|+++++.|++..+
T Consensus        44 ~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         44 AVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            3333443 33567777654 46777778899999999999999999999999999999998754

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=96.87  E-value=0.017  Score=44.09  Aligned_cols=64  Identities=19%  Similarity=0.169  Sum_probs=54.9

Q ss_pred             HHHHHHHHHHHHhhhccchhHH-HHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhhee
Q 017423          110 IIFYLSLFTNSELLLHANVDTF-IVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYV  174 (372)
Q Consensus       110 ~~~~~~~~~~~~al~~~~~~~~-~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~  174 (372)
                      +.+..+.++-..+++++|.+.+ ++......+.+++.+++++||+ .+..+++++.+.+.|++.+-
T Consensus        38 v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~-l~~~~~~gl~LiiaGvi~Lk  102 (106)
T COG2076          38 VGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGES-LSLIKLLGLALILAGVIGLK  102 (106)
T ss_pred             HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCc-CCHHHHHHHHHHHHHHHHhh
Confidence            3344556677788999999987 7788889999999999999999 99999999999999988654

>PRK11431 multidrug efflux system protein; Provisional

Probab=96.84  E-value=0.012  Score=45.24  Aligned_cols=64  Identities=11%  Similarity=0.151  Sum_probs=50.4

Q ss_pred             HHHHHHH-HHHHhcccch-hHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhccc
Q 017423          267 GLAISFF-GFSCRRAISA-TGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQS  330 (372)
Q Consensus       267 ~~~~~~~-~~~~i~~~~a-~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~  330 (372)
                      ++..++. ...++|+.+. ..+++..-+..+.+++.|+++|+|++|+.+++|+.+++.|++..+..
T Consensus        38 ~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l~  103 (105)
T PRK11431         38 AMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKLS  103 (105)
T ss_pred             HHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhcc
Confidence            3333443 3456677764 45677888999999999999999999999999999999999886543

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=96.83  E-value=0.013  Score=52.82  Aligned_cols=113  Identities=15%  Similarity=0.158  Sum_probs=75.6

Q ss_pred             cCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccc-hhHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHH
Q 017423          209 IGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWY-SFEVVLPVGLSCIFGLAISFFGFSCRRAISATGFT  287 (372)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s  287 (372)
                      .+-+|.+...-+.+.++++.....++..            +.+. +...+..-..+|++-.+-+..++.+.++.+.+.+-
T Consensus         8 ~gG~~~~Q~lG~t~Gali~alv~~~~~~------------p~~~~~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tm   75 (269)
T PF06800_consen    8 IGGKPANQILGTTIGALIFALVVFLFRQ------------PAFSMSGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTM   75 (269)
T ss_pred             eCCcHHHHHHHHHHHHHHHHHHHHHHhC------------CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeee
Confidence            3455666665555555444333333222            1232 12345556678888888888888888888877777


Q ss_pred             HHHH-HHHHHHHHHHHHhcCCCCchhhH----HHHHHHHHhhhhhcccccC
Q 017423          288 VLGI-VNKLLTVVINLVIWDKHSTWVGT----VGLLICMLGGVMYQQSTSN  333 (372)
Q Consensus       288 ~~~~-l~~v~~~~ls~~~~~e~~t~~~~----~G~~lil~g~~l~~~~~~~  333 (372)
                      .+.+ ++-+.+.++|+++|||.-+..++    +++++++.|+++.++.+++
T Consensus        76 PiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~  126 (269)
T PF06800_consen   76 PISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKK  126 (269)
T ss_pred             ccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcccccc
Confidence            7665 66677889999999997765554    4888999999988877644

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=96.81  E-value=0.0029  Score=56.57  Aligned_cols=130  Identities=17%  Similarity=0.245  Sum_probs=73.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHH-HHHhhhHHHHHHhhhcccccchhHHHHHHHH
Q 017423          184 AYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLE-LLIMGELKKIKHEMTTASDWYSFEVVLPVGL  262 (372)
Q Consensus       184 G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (372)
                      |++.+++|+++++...+=.||.-.   .++.-..+++.. ++.+.-.. .+..+.           +...   .|  ...
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~~~---gDg~~fQw~~~~-~i~~~g~~v~~~~~~-----------p~f~---p~--aml   60 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKFDT---GDGFFFQWVMCS-GIFLVGLVVNLILGF-----------PPFY---PW--AML   60 (254)
T ss_pred             CchhHHHHHHHhcccceeeEeccC---CCcHHHHHHHHH-HHHHHHHHHHHhcCC-----------Ccce---eH--HHh
Confidence            677888999999988887776521   234333333332 22221111 111111           1111   11  233


Q ss_pred             HHHHHHHHHHHHHHHhcccchh-HHHHHHHHHHHHHHHHHHH-hcCC-----CCchhhHHHHHHHHHhhhhhcccccC
Q 017423          263 SCIFGLAISFFGFSCRRAISAT-GFTVLGIVNKLLTVVINLV-IWDK-----HSTWVGTVGLLICMLGGVMYQQSTSN  333 (372)
Q Consensus       263 ~~~~~~~~~~~~~~~i~~~~a~-~~s~~~~l~~v~~~~ls~~-~~~e-----~~t~~~~~G~~lil~g~~l~~~~~~~  333 (372)
                      +|.+-...|....-++|..|-. -..+.+..+-+.+-..|-+ +|++     .-++.+.+|++++++|..++..-|.+
T Consensus        61 gG~lW~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~  138 (254)
T PF07857_consen   61 GGALWATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSE  138 (254)
T ss_pred             hhhhhhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCC
Confidence            4444444555545556666533 3345555666666666654 5654     35688999999999999999876643

The region concerned is approximately 280 residues long.

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=96.80  E-value=0.013  Score=54.28  Aligned_cols=118  Identities=14%  Similarity=0.110  Sum_probs=82.1

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHH
Q 017423          181 TVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPV  260 (372)
Q Consensus       181 ~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  260 (372)
                      ...|..+++.++++.+....++|+-..+.+.+.....  ..       +.         +         -+.++.+|..+
T Consensus         5 ~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~--~~-------~~---------~---------~l~~~~W~~G~   57 (300)
T PF05653_consen    5 FYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAG--SG-------GR---------S---------YLRRPLWWIGL   57 (300)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc--ch-------hh---------H---------HHhhHHHHHHH
Confidence            4579999999999999999999997655222111000  00       00         0         01122234433


Q ss_pred             HHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcc
Q 017423          261 GLSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQ  329 (372)
Q Consensus       261 ~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~  329 (372)
                      +. ..++.+.+   +.++...+++..+.++.+.-++..+++..+++|+++..+++|.++++.|..+...
T Consensus        58 ~~-~~~g~~~~---~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~  122 (300)
T PF05653_consen   58 LL-MVLGEILN---FVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVI  122 (300)
T ss_pred             HH-HhcchHHH---HHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEE
Confidence            32 23344443   4456888999999999999999999999999999999999999999999876543

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=96.79  E-value=0.025  Score=43.89  Aligned_cols=65  Identities=12%  Similarity=0.156  Sum_probs=54.9

Q ss_pred             HHHHHHHHHHHHhhhccchhHHHHH-HHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheee
Q 017423          110 IIFYLSLFTNSELLLHANVDTFIVF-RSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVL  175 (372)
Q Consensus       110 ~~~~~~~~~~~~al~~~~~~~~~ii-~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~  175 (372)
                      +.+..+.++...+++.+|.+.+..+ ....-+.+++.+++++||+ .++.++.++.++++|++++-.
T Consensus        38 ~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~-~~~~~~~gi~lIi~GVi~l~l  103 (110)
T PRK09541         38 ICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQR-LDLPAIIGMMLICAGVLVINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHHHHHhc
Confidence            3445556677888999999998666 6688899999999999999 999999999999999987644

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=96.72  E-value=0.059  Score=47.49  Aligned_cols=118  Identities=18%  Similarity=0.101  Sum_probs=78.4

Q ss_pred             HHHHHHHHHccCCchHHHHHHHHHHHHHHHHHHhhcCcccccccchhhhHHHHHHHHHHHHH-HHHHHHhhhccchhHHH
Q 017423           54 LSIINKWAIMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALELLTVWRFLPAAIIFYLS-LFTNSELLLHANVDTFI  132 (372)
Q Consensus        54 ~~~~~K~~l~~~~~p~~l~~~r~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~al~~~~~~~~~  132 (372)
                      +.+..|.+-..-| .-.-+..-|.++.++++.+..... ...-++++....-+..+++...- ..+.+.+++.+|.+.+.
T Consensus       163 YIv~G~r~g~~~~-g~~g~a~gm~vAaviv~Pig~~~a-g~~l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~  240 (292)
T COG5006         163 YIVLGQRAGRAEH-GTAGVAVGMLVAALIVLPIGAAQA-GPALFSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFG  240 (292)
T ss_pred             HHHHcchhcccCC-CchHHHHHHHHHHHHHhhhhhhhc-chhhcChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHH
Confidence            3445555554333 344555667777777766654221 11112333222223333333322 55678899999999999


Q ss_pred             HHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhhee
Q 017423          133 VFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYV  174 (372)
Q Consensus       133 ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~  174 (372)
                      ++.++.|.+.++.++++++|. ++..+|.++..++.+.+-.+
T Consensus       241 ~LlSLePa~aAl~G~i~L~e~-ls~~qwlaI~~ViaAsaG~~  281 (292)
T COG5006         241 TLLSLEPALAALSGLIFLGET-LTLIQWLAIAAVIAASAGST  281 (292)
T ss_pred             HHHHhhHHHHHHHHHHHhcCC-CCHHHHHHHHHHHHHHhccc
Confidence            999999999999999999999 99999999988888766433

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=96.46  E-value=0.0011  Score=58.37  Aligned_cols=70  Identities=17%  Similarity=0.252  Sum_probs=60.0

Q ss_pred             HHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccc
Q 017423          262 LSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQST  331 (372)
Q Consensus       262 ~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~  331 (372)
                      .=|+.|+..-+..|+++++.+-.-+.++....|+++++++|.+++|+.|..+.+|..+.+.|+++..+..
T Consensus       102 LRg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPp  171 (346)
T KOG4510|consen  102 LRGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPP  171 (346)
T ss_pred             eehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCC
Confidence            3455566555556777888888888999999999999999999999999999999999999999987654

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=96.23  E-value=0.32  Score=45.18  Aligned_cols=72  Identities=13%  Similarity=0.200  Sum_probs=63.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccc
Q 017423          260 VGLSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQST  331 (372)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~  331 (372)
                      +..-+++-.+.|..+|.++++.+|.++++..-++...+.+++.++++++++..||...++-..|+.+.+...
T Consensus        95 ~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~  166 (345)
T KOG2234|consen   95 VSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPS  166 (345)
T ss_pred             HHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccC
Confidence            444555666677778889999999999999999999999999999999999999999999999999888433

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.14  E-value=0.024  Score=42.62  Aligned_cols=54  Identities=9%  Similarity=0.145  Sum_probs=29.3

Q ss_pred             HHHHHHH-HHHHhcccchhHH-HHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHH
Q 017423          267 GLAISFF-GFSCRRAISATGF-TVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLIC  320 (372)
Q Consensus       267 ~~~~~~~-~~~~i~~~~a~~~-s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li  320 (372)
                      ++..++. ...++|+.+.... .+..-+..+.+++.|.++|||++|+.+++|+.+|
T Consensus        38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            3444443 4467888877665 5566689999999999999999999999999875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.51  E-value=0.83  Score=37.31  Aligned_cols=138  Identities=12%  Similarity=0.086  Sum_probs=82.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHH
Q 017423          183 MAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGL  262 (372)
Q Consensus       183 ~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (372)
                      ..+++.+.+..+-.++.-..-++.+..+ +|.--.+.+...+...+....+.....+...      .....+ +|  ...
T Consensus         5 l~ll~~i~aG~~l~~Q~~iN~qL~~~~~-spl~As~isf~vGt~~L~~l~l~~~~~~~~a------~~~~~p-wW--~~~   74 (150)
T COG3238           5 LYLLFAILAGALLPLQAAINGRLARYLG-SPLLASLISFLVGTVLLLILLLIKQGHPGLA------AVASAP-WW--AWI   74 (150)
T ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCchh------hccCCc-hH--HHH
Confidence            4556677777777777777777766533 4655555555555433333322222211110      011112 23  345


Q ss_pred             HHHHHHHHHHHHHHHhcccchhHHHHHHHH-HHHHHHHHHHHh-cC---CCCchhhHHHHHHHHHhhhhhccc
Q 017423          263 SCIFGLAISFFGFSCRRAISATGFTVLGIV-NKLLTVVINLVI-WD---KHSTWVGTVGLLICMLGGVMYQQS  330 (372)
Q Consensus       263 ~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l-~~v~~~~ls~~~-~~---e~~t~~~~~G~~lil~g~~l~~~~  330 (372)
                      .|++|..+-........+.+++++..+... +-+.+.+++.+= +|   .+++...++|++++++|+++.++.
T Consensus        75 GG~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~  147 (150)
T COG3238          75 GGLLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRF  147 (150)
T ss_pred             ccchhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhccc
Confidence            577777777766777889988877665554 444555666652 33   489999999999999996665544

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=95.48  E-value=0.073  Score=39.99  Aligned_cols=55  Identities=20%  Similarity=0.259  Sum_probs=32.6

Q ss_pred             HHHHHHHHHHHhhhccchhHH-HHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHH
Q 017423          111 IFYLSLFTNSELLLHANVDTF-IVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATI  166 (372)
Q Consensus       111 ~~~~~~~~~~~al~~~~~~~~-~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~  166 (372)
                      .+..+.++...+++++|.+.+ .+...+..+.+.+.+.+++||+ .+..++.++.++
T Consensus        38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~-~s~~~~~gi~lI   93 (93)
T PF00893_consen   38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGES-LSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH---------HHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCC-CCHHHHhheeeC
Confidence            455667788889999999998 5567799999999999999999 899999988753

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=95.28  E-value=0.087  Score=40.87  Aligned_cols=71  Identities=21%  Similarity=0.212  Sum_probs=53.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhccchhHHHHH-HHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhhe
Q 017423          101 TVWRFLPAAIIFYLSLFTNSELLLHANVDTFIVF-RSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIY  173 (372)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~ii-~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~  173 (372)
                      .++...|..+ +..+....+..+...+.|.+.-+ ++++=+++++.++++ +|+..+++++.|+.+.+.|+.+.
T Consensus        41 n~~y~ipf~l-Nq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~l-ge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   41 NPKYIIPFLL-NQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLL-GEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             hHHHHHHHHH-HHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHh-cCcccchhHHHHHHHHHcCeeee
Confidence            4555565554 44444456777888999998766 588889999999655 66658889999999999998764

Many members are annotated as potential transmembrane proteins.

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=94.73  E-value=1.8  Score=34.98  Aligned_cols=115  Identities=12%  Similarity=0.098  Sum_probs=72.7

Q ss_pred             HHHHHHHccCCchHHHHHHHHHHHHHHHHHHhhcCcc-cccccchhhhHHHHHHHHHHHHHHHHHHHhhhccchhHHHHH
Q 017423           56 IINKWAIMKFPYPGALTALQYFTSAAGVLLCGYFKFL-EHDALELLTVWRFLPAAIIFYLSLFTNSELLLHANVDTFIVF  134 (372)
Q Consensus        56 ~~~K~~l~~~~~p~~l~~~r~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~ii  134 (372)
                      ..|-..-+...-|+.-++.-+..+.+.+.++.....+ +.+..+.-+++ ...-|++....+.++......+.++.+..+
T Consensus        18 ~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w-~~lGG~lG~~~V~~~~~~vp~lG~~~~~~l   96 (138)
T PF04657_consen   18 AFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWW-AYLGGLLGVFFVLSNIILVPRLGAALTTIL   96 (138)
T ss_pred             HHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChH-HhccHHHHHHHHHHHHHHhhhhhHHHHHHH
Confidence            3344333444448888888888888777665544322 22222222333 334677777778888888888877777554


Q ss_pred             H-HHHHHHHHHHHHH----HcCCCCCCHhHHHHHHHHhhhhhh
Q 017423          135 R-SAVPIFVAIGETL----FLHQPWPSIKTWLSLATIFGGSVI  172 (372)
Q Consensus       135 ~-~~~pi~v~~~~~l----~l~~~~~~~~~~~~~~~~~~Gv~l  172 (372)
                      . ..+-+...++..+    .-+++ .++++.+++++++.|+.+
T Consensus        97 ~~~GQl~~sl~iD~fG~fg~~~~~-~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   97 IVAGQLIASLLIDHFGLFGAPKRP-FSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHHHHHHHHccccCCCCCC-CCHHHHHHHHHHHHHHhC
Confidence            4 4455566666653    23455 889999999999999864

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=94.70  E-value=0.02  Score=50.17  Aligned_cols=131  Identities=12%  Similarity=0.112  Sum_probs=83.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHHHH
Q 017423          184 AYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVGLS  263 (372)
Q Consensus       184 G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (372)
                      +++.+++=++.|+..-....|    .+-+|.+...-+.+.++++....+++..+            .. +...++.-..+
T Consensus         3 ~~liaL~P~l~WGsip~v~~k----~GG~p~qQ~lGtT~GALifaiiv~~~~~p------------~~-T~~~~iv~~is   65 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANK----FGGKPYQQTLGTTLGALIFAIIVFLFVSP------------EL-TLTIFIVGFIS   65 (288)
T ss_pred             hHHHHHHHHHHhcccceeeee----cCCChhHhhhhccHHHHHHHHHHheeecC------------cc-chhhHHHHHHh
Confidence            466777788888865555444    33456666666655554443333322111            11 22234445567


Q ss_pred             HHHHHHHHHHHHHHhcccchhHHHHHHH-HHHHHHHHHHHHhcCCCCchhhH----HHHHHHHHhhhhhcccc
Q 017423          264 CIFGLAISFFGFSCRRAISATGFTVLGI-VNKLLTVVINLVIWDKHSTWVGT----VGLLICMLGGVMYQQST  331 (372)
Q Consensus       264 ~~~~~~~~~~~~~~i~~~~a~~~s~~~~-l~~v~~~~ls~~~~~e~~t~~~~----~G~~lil~g~~l~~~~~  331 (372)
                      |.+-.+-+..++.+++..+.+.+..+.+ .+-+-+.++|++.|||..+..+.    +..++++.|+++.++.+
T Consensus        66 G~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~  138 (288)
T COG4975          66 GAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQD  138 (288)
T ss_pred             hhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeec
Confidence            7777777777888888777766666555 56777889999999998777664    45677888888777665

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=94.39  E-value=0.13  Score=48.03  Aligned_cols=72  Identities=11%  Similarity=0.161  Sum_probs=62.2

Q ss_pred             HHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccccC
Q 017423          262 LSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQSTSN  333 (372)
Q Consensus       262 ~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~~~  333 (372)
                      +-|.+-++.+|....+++.++.+..+++....-+++..+|.++-+|++|+...++.++.++|+++.+..+.+
T Consensus       164 ~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~  235 (416)
T KOG2765|consen  164 FFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSK  235 (416)
T ss_pred             HHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEecccc
Confidence            345555666777777889999999999999999999999999999999999999999999999999887643

>TIGR00803 nst UDP-galactose transporter

Probab=94.34  E-value=0.66  Score=40.78  Aligned_cols=59  Identities=10%  Similarity=0.037  Sum_probs=50.7

Q ss_pred             HHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhh
Q 017423          113 YLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVI  172 (372)
Q Consensus       113 ~~~~~~~~~al~~~~~~~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l  172 (372)
                      ..+-.+....++|.+.....+...+.++++.+++.++++++ ++..++.+..+.+.|+.+
T Consensus       163 a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~-ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       163 VGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAK-ISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCC-ccHHHHHHHHHHHeeeEe
Confidence            33334456678999999999999999999999999999998 999999999999988754

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=92.64  E-value=2.7  Score=39.09  Aligned_cols=143  Identities=12%  Similarity=0.081  Sum_probs=78.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHH-HHhHHHHHHHHHHHHH--hhhHHHHHHhhhcccccchhHHHH
Q 017423          182 VMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVL-YNNLEALLLFPLELLI--MGELKKIKHEMTTASDWYSFEVVL  258 (372)
Q Consensus       182 ~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~  258 (372)
                      ..|+++..++.+|.+.+.+-.||.-    .=.|+..+ .+.+++-+++|.....  ..++.+...+   .+   .. .+.
T Consensus         6 i~Gii~h~iGg~~~~sfy~P~kkvk----~WsWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~---~~---~~-~l~   74 (344)
T PF06379_consen    6 ILGIIFHAIGGFASGSFYVPFKKVK----GWSWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSA---TP---AS-TLF   74 (344)
T ss_pred             HHHHHHHHHHHHHhhhhccchhhcC----CccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHh---CC---hh-HHH
Confidence            4699999999999999999888762    22444443 2344555555655322  2333333221   11   11 122


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcccchh-HHHHHHHHHHHHHHHHHHHhcC-------CCCchhhHHHHHHHHHhhhhhccc
Q 017423          259 PVGLSCIFGLAISFFGFSCRRAISAT-GFTVLGIVNKLLTVVINLVIWD-------KHSTWVGTVGLLICMLGGVMYQQS  330 (372)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~i~~~~a~-~~s~~~~l~~v~~~~ls~~~~~-------e~~t~~~~~G~~lil~g~~l~~~~  330 (372)
                      .....|++--+-+..+-..+|+++-+ ..++..-+-.++++++-.++.+       .+-....++|.+++++|+.+..+.
T Consensus        75 ~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~A  154 (344)
T PF06379_consen   75 WTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKA  154 (344)
T ss_pred             HHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHH
Confidence            22222332222222233456776643 3344444555555555444432       344557899999999999988765


Q ss_pred             ccCCC
Q 017423          331 TSNKP  335 (372)
Q Consensus       331 ~~~~~  335 (372)
                      ...|+
T Consensus       155 G~~Ke  159 (344)
T PF06379_consen  155 GSMKE  159 (344)
T ss_pred             HHhhh
Confidence            54433

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=92.55  E-value=3.8  Score=37.40  Aligned_cols=130  Identities=12%  Similarity=0.020  Sum_probs=78.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHccCCc-hHHHHHHHHHHHHHHHHHHhhcCccccc-----ccchhhhHHHHHHHHHHHHH
Q 017423           42 GVAAGYCISASLLSIINKWAIMKFPY-PGALTALQYFTSAAGVLLCGYFKFLEHD-----ALELLTVWRFLPAAIIFYLS  115 (372)
Q Consensus        42 ~~~~~~~~~~~~~~~~~K~~l~~~~~-p~~l~~~r~~~~~i~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~  115 (372)
                      ++...|.++=+..+..++.+..++.. ++.+.+.--+...+.-.........-.+     +...+.++.++..+.++..+
T Consensus       175 ~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~~gavG  254 (327)
T KOG1581|consen  175 LLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYSTCGAVG  254 (327)
T ss_pred             HHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHHhhhhh
Confidence            44566666665566777777776553 3322222222222222221111101111     12334577788888888877


Q ss_pred             HHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhh
Q 017423          116 LFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVI  172 (372)
Q Consensus       116 ~~~~~~al~~~~~~~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l  172 (372)
                      ..+-+..++.-.+=..+++..+-=++.++++.++++++ .++.+|+++.+.++|...
T Consensus       255 Q~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~-~s~~q~~g~~iVFg~i~l  310 (327)
T KOG1581|consen  255 QLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHP-LSSEQWLGVLIVFGGIFL  310 (327)
T ss_pred             hheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCc-cchhhccCeeeehHHHHH
Confidence            65555555544455556666677788888999999999 899999999988888653

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=91.78  E-value=0.42  Score=37.12  Aligned_cols=53  Identities=8%  Similarity=0.053  Sum_probs=42.5

Q ss_pred             HHHHhcccchhHHHHH-HHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhh
Q 017423          274 GFSCRRAISATGFTVL-GIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVM  326 (372)
Q Consensus       274 ~~~~i~~~~a~~~s~~-~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l  326 (372)
                      +++.+++.+-+....+ +.+.-+++++.|+++.+|..+...++|+++++.|+.+
T Consensus        58 f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L  111 (113)
T PF10639_consen   58 FFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL  111 (113)
T ss_pred             HHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence            4455677766655555 5788899999999888888899999999999999864

Many members are annotated as potential transmembrane proteins.

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=91.47  E-value=4.7  Score=37.05  Aligned_cols=139  Identities=18%  Similarity=0.199  Sum_probs=92.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCCCch-hHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHHHH
Q 017423          183 MAYSWALAYLVSMTIDFVYIKHVVMTIGLNTW-GLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLPVG  261 (372)
Q Consensus       183 ~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  261 (372)
                      ..+..++..+++..+-.+..|.++..++.+.. .++.+|++.+++.+...-. .+    ..+  .+..+|....-|+-+ 
T Consensus        12 ~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~-~~----lv~--~~~l~~~~~kk~~P~-   83 (314)
T KOG1444|consen   12 SPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKR-LG----LVN--FRPLDLRTAKKWFPV-   83 (314)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHH-hc----eee--cCCcChHHHHHHccH-
Confidence            34666667777777777888888887776444 3445787766433222211 11    100  111234333334322 


Q ss_pred             HHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccc
Q 017423          262 LSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQST  331 (372)
Q Consensus       262 ~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~  331 (372)
                        .++-.+.-++....+++.+-....++-...++.+.+...++|+..++...+.....+++|...+....
T Consensus        84 --~~lf~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d  151 (314)
T KOG1444|consen   84 --SLLFVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTD  151 (314)
T ss_pred             --HHHHHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhcccc
Confidence              22223333445567899999999999999999999999999999999999999999999988765443

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=91.12  E-value=0.31  Score=41.33  Aligned_cols=62  Identities=11%  Similarity=0.185  Sum_probs=57.3

Q ss_pred             HHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccc
Q 017423          270 ISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQST  331 (372)
Q Consensus       270 ~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~  331 (372)
                      .+|.+..++++.+|+..+.+...+..+.-++++++++|.+....++..++.+.|+.+..+..
T Consensus        66 aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~D  127 (290)
T KOG4314|consen   66 ANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYAD  127 (290)
T ss_pred             CCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEecc
Confidence            57777889999999999999999999999999999999999999999999999998877655

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=91.04  E-value=0.63  Score=40.67  Aligned_cols=71  Identities=7%  Similarity=0.174  Sum_probs=56.5

Q ss_pred             HHHHHHHHHH-HHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccccCC
Q 017423          264 CIFGLAISFF-GFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQSTSNK  334 (372)
Q Consensus       264 ~~~~~~~~~~-~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~~~~  334 (372)
                      +-..++.+.. ...+++..+=-|--+--..+|+...++|+++.+..-+|.......+|++|++++.+...|.
T Consensus        91 cs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv  162 (337)
T KOG1580|consen   91 CSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKV  162 (337)
T ss_pred             HHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhcccccc
Confidence            3334444443 5567788777777777788999999999999999999999999999999999998875443

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=89.50  E-value=0.27  Score=45.02  Aligned_cols=119  Identities=14%  Similarity=0.202  Sum_probs=79.5

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHhhhcccccchhHHHHH
Q 017423          180 FTVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEMTTASDWYSFEVVLP  259 (372)
Q Consensus       180 ~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  259 (372)
                      .+..|.++.+.+++.-+...++.|+-.++.+....+  .               -.|..+-          ...+.+|..
T Consensus        18 d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~~~~r--a---------------~~gg~~y----------l~~~~Ww~G   70 (335)
T KOG2922|consen   18 DNIIGLVLAISSSIFIGSSFILKKKGLKRAGASGLR--A---------------GEGGYGY----------LKEPLWWAG   70 (335)
T ss_pred             CceeeeeehhhccEEEeeehhhhHHHHHHHhhhccc--c---------------cCCCcch----------hhhHHHHHH
Confidence            345688888888888888888888876552110000  0               0011000          011223332


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcc
Q 017423          260 VGLSCIFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQ  329 (372)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~  329 (372)
                      + ....+|=+.||..|   ...+++..+.++.+.-+.+.+++..+++|++++...+|++++++|..+...
T Consensus        71 ~-ltm~vGei~NFaAY---aFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~  136 (335)
T KOG2922|consen   71 M-LTMIVGEIANFAAY---AFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVI  136 (335)
T ss_pred             H-HHHHHHhHhhHHHH---hhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEE
Confidence            2 23334555555544   778889999999999999999999999999999999999999999765443

>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4)

Probab=89.41  E-value=0.11  Score=46.37  Aligned_cols=89  Identities=11%  Similarity=0.128  Sum_probs=0.0

Q ss_pred             HHHHHHHHHHHHHH-HHHHcCCCCCCHhHHHHHHHHhhhhhheeeccc--ccchHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017423          132 IVFRSAVPIFVAIG-ETLFLHQPWPSIKTWLSLATIFGGSVIYVLTDY--QFTVMAYSWALAYLVSMTIDFVYIKHVVMT  208 (372)
Q Consensus       132 ~ii~~~~pi~v~~~-~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~~--~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~  208 (372)
                      +++.+...+.++++ -.++||||..-..-.+.++++.+-..+......  +.-+.|+++.++.++..-.-.+|. .++++
T Consensus        53 ~vl~sfAvvliiIIiIImlF~RrLLCPLGlLCiilimi~lLv~~L~tLtGQ~LF~Gi~~l~l~~lLaL~vW~Ym-~lLr~  131 (381)
T PF05297_consen   53 TVLYSFAVVLIIIIIIIMLFKRRLLCPLGLLCIILIMIVLLVSMLWTLTGQTLFVGIVILFLCCLLALGVWFYM-WLLRE  131 (381)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence            34444443333332 224557775555555555555555554444432  344568877666655544444553 36777


Q ss_pred             cCCCchhHHHHHh
Q 017423          209 IGLNTWGLVLYNN  221 (372)
Q Consensus       209 ~~~~~~~~~~~~~  221 (372)
                      ++.+.|+++.+..
T Consensus       132 ~GAs~WtiLaFcL  144 (381)
T PF05297_consen  132 LGASFWTILAFCL  144 (381)
T ss_dssp             -------------
T ss_pred             hhhHHHHHHHHHH
Confidence            8888888875443

LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=86.26  E-value=2.5  Score=39.24  Aligned_cols=120  Identities=15%  Similarity=0.052  Sum_probs=77.6

Q ss_pred             HHHHHHHHHHc--c--CCchHHHHHHHHHHHHHHHH-HHhhc--Cccc----ccccchhhhHHHHHHHHHHHHHHHHHHH
Q 017423           53 LLSIINKWAIM--K--FPYPGALTALQYFTSAAGVL-LCGYF--KFLE----HDALELLTVWRFLPAAIIFYLSLFTNSE  121 (372)
Q Consensus        53 ~~~~~~K~~l~--~--~~~p~~l~~~r~~~~~i~~~-~~~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (372)
                      .-.+..|..+.  +  .+ ++.+...+--++.+.++ .....  +...    ....+.. ...+...+++..+-....+.
T Consensus       177 l~~I~~~~ll~~~~~~~~-~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~-~~~~~~~sv~~f~~Nls~f~  254 (316)
T KOG1441|consen  177 LRNILSKKLLTSKGESLN-SMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVT-FLILLLNSVLAFLLNLSAFL  254 (316)
T ss_pred             HHHHHHHHhhhccccccC-chHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchh-hHHHHHHHHHHHHHHHHHHH
Confidence            45666677773  3  44 77777777666665555 32222  1111    0011112 22333333333433455566


Q ss_pred             hhhccchhHHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheee
Q 017423          122 LLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVL  175 (372)
Q Consensus       122 al~~~~~~~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~  175 (372)
                      .+..+++=++++...+.=+++.+.++++++++ .++.+.+|..+++.|+.+...
T Consensus       255 ~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~p-vt~~n~~G~~iai~Gv~~Y~~  307 (316)
T KOG1441|consen  255 VIGRTSALTYSVAGHMKRIVVIVVSWLIFGNP-VTFLNALGYAIAILGVFLYSR  307 (316)
T ss_pred             HHcccCchhhhhhccceEEEEEEeEeeeecCC-CchhhHHHHHHHHHHHHHHHH
Confidence            78889999999999999889999999999996 899999999999999887654

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=85.74  E-value=7.3  Score=34.00  Aligned_cols=122  Identities=11%  Similarity=0.115  Sum_probs=74.6

Q ss_pred             HHHHHHHHHHHHHHHHHHc--cCCchHHHHHHHHHHHHHHHHHHhhc-Cccccc----ccchhhhHHHHHHHHHHHHHHH
Q 017423           45 AGYCISASLLSIINKWAIM--KFPYPGALTALQYFTSAAGVLLCGYF-KFLEHD----ALELLTVWRFLPAAIIFYLSLF  117 (372)
Q Consensus        45 ~~~~~~~~~~~~~~K~~l~--~~~~p~~l~~~r~~~~~i~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~  117 (372)
                      ..-|.++....+..|.-.+  ++. -..-.++.-+.+..+++.+.+. +.....    .++.+....++.-|+..++..+
T Consensus       161 ~~NclssaafVL~mrkri~ltNf~-d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgiSy  239 (309)
T COG5070         161 FTNCLSSAAFVLIMRKRIKLTNFK-DFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGISY  239 (309)
T ss_pred             ehhhHhHHHHHHHHHHhhcccccc-hhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhhh
Confidence            4556666656666666653  333 4445566666666555554432 211111    1222333455555666666677


Q ss_pred             HHHHhhhccchhHHHHHHHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhh
Q 017423          118 TNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFG  168 (372)
Q Consensus       118 ~~~~al~~~~~~~~~ii~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~  168 (372)
                      ++-+.++-++...+.++.++--...++-+.+++++. .+...+.++++++.
T Consensus       240 ~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap-~nf~si~sillGfl  289 (309)
T COG5070         240 CSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAP-VNFLSIFSILLGFL  289 (309)
T ss_pred             ccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCc-hhHHHHHHHHHHHH
Confidence            777788888888899998888888888887888887 66666666555443

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=82.37  E-value=26  Score=28.72  Aligned_cols=117  Identities=12%  Similarity=0.117  Sum_probs=65.7

Q ss_pred             HHHHHHHHccCCchHHHHHHHHHHHHHHHHHHhhcCcccccccc--hh-hhHHHHHHHHHHHHHHHHHHHhhhccchhHH
Q 017423           55 SIINKWAIMKFPYPGALTALQYFTSAAGVLLCGYFKFLEHDALE--LL-TVWRFLPAAIIFYLSLFTNSELLLHANVDTF  131 (372)
Q Consensus        55 ~~~~K~~l~~~~~p~~l~~~r~~~~~i~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~  131 (372)
                      .-.|--.-+....|+.-.+.-+.++.+++..+.+.+ .+.+...  .+ +++. ...|+++...+..+......+.+...
T Consensus        21 ~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~-~~~~~~a~~~~~pwW~-~~GG~lGa~~vt~s~~l~p~lGa~~t   98 (150)
T COG3238          21 AAINGRLARYLGSPLLASLISFLVGTVLLLILLLIK-QGHPGLAAVASAPWWA-WIGGLLGAIFVTSSILLAPRLGAATT   98 (150)
T ss_pred             HHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHh-cCCCchhhccCCchHH-HHccchhhhhhhhhHHhccchhHHHH
Confidence            334444444455588888888888777666555442 2222222  23 3333 33344444444444455555544444


Q ss_pred             -HHHHHHHHHHHHHHHHHHc----CCCCCCHhHHHHHHHHhhhhhhee
Q 017423          132 -IVFRSAVPIFVAIGETLFL----HQPWPSIKTWLSLATIFGGSVIYV  174 (372)
Q Consensus       132 -~ii~~~~pi~v~~~~~l~l----~~~~~~~~~~~~~~~~~~Gv~l~~  174 (372)
                       .++...+-+.-+++..+=+    +++ .+..+++++++.++|+.+..
T Consensus        99 ~~l~i~gQli~glliD~fG~~g~~~~~-~~~~r~lgi~L~l~gil~~~  145 (150)
T COG3238          99 IALVIAGQLIMGLLIDHFGWFGVPKRP-LNLPRILGILLVLAGILLAR  145 (150)
T ss_pred             HHHHHHHHHHHHHHHHhhcccCCCcCC-CCHHHHHHHHHHHHHHHHhc
Confidence             4455555556666554322    344 89999999999999965543

>PRK02237 hypothetical protein; Provisional

Probab=81.24  E-value=5.2  Score=30.55  Aligned_cols=47  Identities=15%  Similarity=0.158  Sum_probs=38.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccc
Q 017423          285 GFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQST  331 (372)
Q Consensus       285 ~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~  331 (372)
                      ..+.++-+=.+.+++.++.+-+.+++.+.++|.+++++|+.+.....
T Consensus        61 vYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p  107 (109)
T PRK02237         61 VYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP  107 (109)
T ss_pred             HHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence            34555556667888999999999999999999999999987765543

>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=80.60  E-value=17  Score=27.24  Aligned_cols=63  Identities=13%  Similarity=0.255  Sum_probs=40.3

Q ss_pred             HHHHHHHHHHHHH---hcccchhHHHH--HHHHHHHHHH----HHHHHhcCCCCchhhHHHHHHHHHhhhhh
Q 017423          265 IFGLAISFFGFSC---RRAISATGFTV--LGIVNKLLTV----VINLVIWDKHSTWVGTVGLLICMLGGVMY  327 (372)
Q Consensus       265 ~~~~~~~~~~~~~---i~~~~a~~~s~--~~~l~~v~~~----~ls~~~~~e~~t~~~~~G~~lil~g~~l~  327 (372)
                      +....+++..|..   -.|+|-...|.  +-.++.+++.    .+|+++++|++.+..+.|.+++.+|+...
T Consensus        42 ~~SWGIA~fEY~LqvPaNRiG~~v~s~~QLK~mQEVItL~iFv~Fsvfyl~epl~~~~l~a~~~i~gav~fi  113 (116)
T COG3169          42 LASWGIAFFEYLLQVPANRIGHQVYSAAQLKTMQEVITLAIFVPFSVFYLKEPLRWNYLWAFLLILGAVYFI  113 (116)
T ss_pred             HHHhhHHHHHHHHhCccchhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHh
Confidence            3344455554433   23444444333  2335555553    56888999999999999999998887653

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	372
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.72
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.24
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.02
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	97.86

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.72  E-value=1.9e-08  Score=80.20  Aligned_cols=68  Identities=12%  Similarity=0.133  Sum_probs=47.3

Q ss_pred             HHHHHHHHHH-HHHHhcccchhHHHHH-HHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccc
Q 017423          264 CIFGLAISFF-GFSCRRAISATGFTVL-GIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQST  331 (372)
Q Consensus       264 ~~~~~~~~~~-~~~~i~~~~a~~~s~~-~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~  331 (372)
                      +++++.+.+. +.+++++.++.+...+ ..+.|++++++|+++|+|++|+.+++|+++|++|+++.+..+
T Consensus        36 ~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            4445555554 6678999999988887 899999999999999999999999999999999999987644

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.24  E-value=6.1e-06  Score=63.29  Aligned_cols=68  Identities=12%  Similarity=0.133  Sum_probs=57.1

Q ss_pred             HHHHHHHHHH-HHHHhcccchhHHHHH-HHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhhhcccc
Q 017423          264 CIFGLAISFF-GFSCRRAISATGFTVL-GIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGVMYQQST  331 (372)
Q Consensus       264 ~~~~~~~~~~-~~~~i~~~~a~~~s~~-~~l~~v~~~~ls~~~~~e~~t~~~~~G~~lil~g~~l~~~~~  331 (372)
                      +++++...+. ..+++|+.+..+...+ ..+.|+.++++|+++|||++|+.+++|+++++.|+++.+..+
T Consensus        36 ~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            3344444444 5568999999999777 799999999999999999999999999999999999887644

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.02  E-value=2.9e-05  Score=59.49  Aligned_cols=67  Identities=13%  Similarity=0.152  Sum_probs=58.7

Q ss_pred             HHHHHHHHHHHHhhhccchhHHHHH-HHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheeecc
Q 017423          110 IIFYLSLFTNSELLLHANVDTFIVF-RSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVLTD  177 (372)
Q Consensus       110 ~~~~~~~~~~~~al~~~~~~~~~ii-~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~~~  177 (372)
                      +.+....++...++++.|.+.+..+ .++.|+++++++++++||+ .++.++.++.+++.|+.+....+
T Consensus        38 ~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~-~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           38 ICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQR-LDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHHHHHhcCC
Confidence            3445567778889999999999887 8999999999999999999 99999999999999999876543

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=97.86  E-value=3.5e-05  Score=61.22  Aligned_cols=65  Identities=14%  Similarity=0.161  Sum_probs=47.3

Q ss_pred             HHHHHHHHHHHHhhhccchhHHHHH-HHHHHHHHHHHHHHHcCCCCCCHhHHHHHHHHhhhhhheee
Q 017423          110 IIFYLSLFTNSELLLHANVDTFIVF-RSAVPIFVAIGETLFLHQPWPSIKTWLSLATIFGGSVIYVL  175 (372)
Q Consensus       110 ~~~~~~~~~~~~al~~~~~~~~~ii-~~~~pi~v~~~~~l~l~~~~~~~~~~~~~~~~~~Gv~l~~~  175 (372)
                      +.+....++.+.++++++++.+..+ .++.|++++++++++++|+ .++.++++++++++|+.++..
T Consensus        38 ~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~-ls~~~~~Gi~LIi~GV~ll~~  103 (137)
T 2i68_A           38 ICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQR-LDLPAIIGMMLICAGVLIINL  103 (137)
T ss_dssp             HHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC-------CHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHHHHHhc
Confidence            3455567788999999999988887 9999999999999999999 999999999999999998754

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00