Citrus Sinensis ID: 017439
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 371 | 2.2.26 [Sep-21-2011] | |||||||
| Q9FKR0 | 361 | Probable S-adenosylmethio | yes | no | 0.956 | 0.983 | 0.441 | 3e-84 | |
| Q9FKC8 | 362 | Probable S-adenosylmethio | no | no | 0.954 | 0.977 | 0.425 | 3e-83 | |
| Q9FKD0 | 362 | Probable S-adenosylmethio | no | no | 0.954 | 0.977 | 0.406 | 3e-80 | |
| Q9LS10 | 359 | Probable S-adenosylmethio | no | no | 0.894 | 0.924 | 0.430 | 1e-77 | |
| Q68CM3 | 365 | Probable caffeine synthas | N/A | no | 0.854 | 0.868 | 0.344 | 1e-47 | |
| Q9SPV4 | 359 | Salicylate O-methyltransf | N/A | no | 0.830 | 0.857 | 0.330 | 3e-44 | |
| Q9FZN8 | 369 | Caffeine synthase 1 OS=Ca | N/A | no | 0.859 | 0.864 | 0.330 | 3e-44 | |
| Q9FYZ9 | 364 | Benzoate carboxyl methylt | N/A | no | 0.840 | 0.857 | 0.303 | 2e-40 | |
| Q9AVK0 | 372 | 7-methylxanthosine syntha | N/A | no | 0.870 | 0.868 | 0.314 | 3e-40 | |
| A4GE69 | 372 | 7-methylxanthosine syntha | N/A | no | 0.870 | 0.868 | 0.314 | 4e-40 |
| >sp|Q9FKR0|MT878_ARATH Probable S-adenosylmethionine-dependent methyltransferase At5g38780 OS=Arabidopsis thaliana GN=At5g38780 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 312 bits (800), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 160/362 (44%), Positives = 233/362 (64%), Gaps = 7/362 (1%)
Query: 11 SPEAYPMVGGDGPHSYAKNSIYQEAIVNGSKGMIAAGIRKTLDLKSLRLDTSSTFKIADL 70
S ++YPM GGD HSY NS YQ+A ++G + I + LDL ++ + S TF IAD
Sbjct: 4 SSQSYPMSGGDDQHSYIHNSSYQKAGIDGVQEKARQYILENLDLLNMNPNLS-TFTIADF 62
Query: 71 GCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP 130
GCS GPNTF A+QNII+ ++L ++ E P LEFQV+FND NNDFNTLF++ P
Sbjct: 63 GCSIGPNTFHAVQNIIDIVKLKHLKESQEDSRVAP--LEFQVYFNDLPNNDFNTLFRTQP 120
Query: 131 LSKK--YFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILC 188
S K YF+ GVPGSF+GR+ P +S+H+ +TS WLSK+P+E+ + NS AWN+ +I C
Sbjct: 121 PSSKQEYFSVGVPGSFYGRVLPRNSIHIGNTSFTTHWLSKVPEEVCDKNSLAWNKNYIHC 180
Query: 189 SGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDY 248
+ +EV EAY QF+ D+ FL ARA+ELVPGGL++ L + DG+ M+ T G D
Sbjct: 181 NNLIEEVTEAYKVQFEKDMGVFLKARAEELVPGGLMITLGQCLPDGVAMYETWSGIVKDT 240
Query: 249 LGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFTHPLVHMV 308
+G CL D+A +G+ EEK++ FN+P+Y+P + EL G I++N F+IE+M +HPL +
Sbjct: 241 IGDCLQDMATLGVTTEEKIEMFNLPVYFPQVSELKGAIEQNIRFTIEMMEIVSHPLEAVQ 300
Query: 309 YSAEFWASLSRAAFGGLVGQHFGYQFVDRIFNYYSTKLAENMSSICDGKTQDKIELFVLL 368
S F S+ RA ++ +HFG VD +F ++ KL+E+ I K + ++ ++L
Sbjct: 301 LSNNFITSMYRAILSTVIERHFGGSVVDELFRQFAKKLSEH--PIDFEKCKKQMVYHIVL 358
Query: 369 RR 370
+R
Sbjct: 359 KR 360
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Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 1EC: .EC: 1EC: .EC: - |
| >sp|Q9FKC8|MT799_ARATH Probable S-adenosylmethionine-dependent methyltransferase At5g37990 OS=Arabidopsis thaliana GN=At5g37990 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 308 bits (790), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 154/362 (42%), Positives = 227/362 (62%), Gaps = 8/362 (2%)
Query: 12 PEAYPMVGGDGPHSYAKNSIYQEAIVNGSKGMIAAGIRKTLDLKSL-RLDTSSTFKIADL 70
P+++PM GGDGPHSY NS YQ+ ++G+K + I K LDL+ L R + +IAD
Sbjct: 5 PQSFPMNGGDGPHSYIHNSSYQKVAIDGAKEKTSEAILKNLDLELLNRNSDENILRIADF 64
Query: 71 GCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP 130
GCS GPNTF +QNII+ + K ++ E + LEFQV FND NNDFNTLF++ P
Sbjct: 65 GCSIGPNTFEVVQNIIDTV---KQKNLKENNAYIGAPLEFQVCFNDQPNNDFNTLFRTQP 121
Query: 131 LSKK--YFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILC 188
+S K Y + GVPGSFHGR+ P++SLH+ H + AL WLS +P+ + + SPA N+ +I C
Sbjct: 122 ISSKQAYLSVGVPGSFHGRVLPKNSLHIGHITYALHWLSTVPQHVCDKKSPALNKSYIQC 181
Query: 189 SGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDY 248
+ +EV EAY QFK D+ FL ARA+ELV GGL++L + DG+P T +G D
Sbjct: 182 NNLVEEVTEAYRVQFKKDMGDFLGARAEELVSGGLMILSGQCLPDGVPKALTWQGVVIDM 241
Query: 249 LGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFTHPLVHMV 308
+G CL D+A G+ +EK++ F++P+Y P + E I+RN+NFSIE M +HP+ +
Sbjct: 242 IGDCLMDMAKQGITTKEKIELFSLPIYIPHISEFKAEIERNENFSIETMEKISHPMDYKP 301
Query: 309 YSAEFWASLSRAAFGGLVGQHFGYQFVDRIFNYYSTKLAENMSSICDGKTQDKIELFVLL 368
+ +F S+ RA ++ +HFG V+ +F+ ++ KL N I + + + F++L
Sbjct: 302 LTNDFITSMFRAILNTIIEEHFGDGVVNELFDRFAKKL--NKYPIDFKRCKKYVNYFIVL 359
Query: 369 RR 370
+R
Sbjct: 360 KR 361
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|Q9FKD0|MT797_ARATH Probable S-adenosylmethionine-dependent methyltransferase At5g37970 OS=Arabidopsis thaliana GN=At5g37970 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 299 bits (765), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 147/362 (40%), Positives = 227/362 (62%), Gaps = 8/362 (2%)
Query: 12 PEAYPMVGGDGPHSYAKNSIYQEAIVNGSKGMIAAGIRKTLDLKSL-RLDTSSTFKIADL 70
P+++PM GGDGPHSY NS YQ+ ++G K + I + LDL+ L R + +I D
Sbjct: 5 PQSFPMNGGDGPHSYIHNSSYQKVAIDGVKERTSEAILEKLDLEFLNRNSEENILRIVDF 64
Query: 71 GCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP 130
GCS GPNTF +QNII+ ++ + +++ + + LEFQV FND NNDFNTLF++ P
Sbjct: 65 GCSIGPNTFDVVQNIIDTVKQKRLKEN---KTYIGAPLEFQVCFNDQPNNDFNTLFRTQP 121
Query: 131 L--SKKYFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILC 188
K+YF+ GVPGSFHGR+ P++SLH+ HTS L WLS +P+ + + SPA N+ +I C
Sbjct: 122 FFSRKEYFSVGVPGSFHGRVLPKNSLHIGHTSYTLHWLSNVPQHVCDKKSPALNKSYIQC 181
Query: 189 SGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDY 248
+ EV +AY QF+ D FL ARA+ELV GGL++L + DGIP T +G D
Sbjct: 182 NNLVDEVTKAYKIQFRKDFGGFLEARAEELVSGGLMILSGQCLPDGIPKALTWQGVVIDM 241
Query: 249 LGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFTHPLVHMV 308
+G CL DLA +G+ ++EK++ F++P Y P + E +I++N+NF++E M +HP+ +M
Sbjct: 242 IGDCLMDLAKLGITSKEKIELFSLPTYIPHISEFKANIEQNENFNVETMEEISHPMDYMP 301
Query: 309 YSAEFWASLSRAAFGGLVGQHFGYQFVDRIFNYYSTKLAENMSSICDGKTQDKIELFVLL 368
+ +F S+ RA ++ +HFG V+ +F+ + +L + I + + + F++L
Sbjct: 302 LTNDFITSMFRAILNTIIEEHFGEGVVNELFSRLAKRL--DKYPIDFKRCKKYVNYFIVL 359
Query: 369 RR 370
+R
Sbjct: 360 KR 361
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|Q9LS10|MT810_ARATH Probable S-adenosylmethionine-dependent methyltransferase At5g38100 OS=Arabidopsis thaliana GN=At5g38100 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 290 bits (743), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 146/339 (43%), Positives = 215/339 (63%), Gaps = 7/339 (2%)
Query: 11 SPEAYPMVGGDGPHSYAKNSIYQEAIVNGSKGMIAAGIRKTLDLKSLRLDTSSTFKIADL 70
S YPM G HSY NS YQ+A ++ + I + LDL+ L D TF+IAD
Sbjct: 4 SSHMYPMSSGHDQHSYIHNSSYQKAAISSAVEKTRRCIFEKLDLQ-LSSDFG-TFRIADF 61
Query: 71 GCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP 130
GCS GPNTF Q+II+ ++ + ++ E ++ LEFQVFFND NDFNTLF++ P
Sbjct: 62 GCSIGPNTFHVAQSIIDTVKSKRLEESTE---NSLVPLEFQVFFNDQPTNDFNTLFRTQP 118
Query: 131 LS--KKYFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILC 188
LS ++YF+ GVPGSF+GR+ P +S+H+ HTS WLSK+P + + S AWN+ +I C
Sbjct: 119 LSPEREYFSVGVPGSFYGRVLPRNSIHIGHTSYTTHWLSKVPDNVCDKKSMAWNKNYIQC 178
Query: 189 SGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDY 248
+ +EV +AY QF D+E FL+ARA+ELVPGGL++++ + DG+ ++ T +G D
Sbjct: 179 NNLLEEVTKAYKVQFIKDMEIFLDARAEELVPGGLMIVIGECLPDGVSLYETWQGYVMDT 238
Query: 249 LGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFTHPLVHMV 308
+G CL D+A G+ +EEK+D F++P+Y+P EL G I++N +F+IE+M T +HPL
Sbjct: 239 IGDCLMDMAKSGITSEEKIDLFSLPVYFPQFSELKGEIEKNGSFTIELMETTSHPLEGKP 298
Query: 309 YSAEFWASLSRAAFGGLVGQHFGYQFVDRIFNYYSTKLA 347
+ +F S RA ++ +HFG VD +F + KL+
Sbjct: 299 LTNDFITSTFRAFLTTIIEKHFGDGVVDELFYRLAKKLS 337
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|Q68CM3|TCS2_CAMSI Probable caffeine synthase 2 OS=Camellia sinensis GN=TCS2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 190 bits (483), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 120/348 (34%), Positives = 186/348 (53%), Gaps = 31/348 (8%)
Query: 13 EAYPMVGGDGPHSYAKNSIYQEAIVNGSKGMIAAGIRKTLDLKSLRLDTSSTFKIADLGC 72
EA M G+G SYA+NS + + + + + ++ + +TL K L DLGC
Sbjct: 6 EALFMNKGEGESSYAQNSSFTQTVTSMTMPVLENAV-ETLFSKDFHL--LQALNAVDLGC 62
Query: 73 STGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLS 132
+ GP TF I IK + +C N LE QV+ ND NDFNTLFK +P S
Sbjct: 63 AAGPTTFTV-------ISTIKRMMEKKCRELNCQTLELQVYLNDLPGNDFNTLFKGLP-S 114
Query: 133 K---------KYFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNR 183
K + GVPGSFHGRLFP +SLH+ H+ ++ WL++ PK +T+ A N+
Sbjct: 115 KVVGNKCEEVSCYVVGVPGSFHGRLFPRNSLHLVHSCYSVHWLTQAPKGLTSKEGLALNK 174
Query: 184 GHILCSGFEKEVA-EAYSAQFKNDIESFLNARAQELVPGGLLLLLTPTIRDGIPMFSTPE 242
G I S V EAY +QF D FLN+R+QE+VP G ++L+ +R + +
Sbjct: 175 GKIYISKTSPPVVREAYLSQFHEDFTMFLNSRSQEVVPNGCMVLI---LRGRLSSDPSDM 231
Query: 243 GTNFDY--LGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTF 300
G+ F + L + +L + GLI E+K+D+FNVP Y+P L E+ ++RN +F+I+ M F
Sbjct: 232 GSCFTWELLAVAIAELVSQGLIDEDKLDTFNVPSYFPSLEEVKDIVERNGSFTIDHMEGF 291
Query: 301 THPLVHMV-----YSAEFWASLSRAAFGGLVGQHFGYQFVDRIFNYYS 343
M E +A+++RA ++ FG++ +D+++ ++
Sbjct: 292 ELDSPEMQENDKWVRGEKFATVARAFTEPIISNQFGHEIMDKLYEKFT 339
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May be involved in the biosynthesis of caffeine. Catalyzes the conversion of 7-methylxanthine (7mX) to theobromine and of theobromine to caffeine. Has 1-N-methylation activity. Camellia sinensis (taxid: 4442) EC: 2 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 6 EC: 0 |
| >sp|Q9SPV4|SAMT_CLABR Salicylate O-methyltransferase OS=Clarkia breweri GN=SAMT PE=1 SV=1 | Back alignment and function description |
|---|
Score = 179 bits (454), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 119/360 (33%), Positives = 182/360 (50%), Gaps = 52/360 (14%)
Query: 17 MVGGDGPHSYAKNSIYQEAIVNGSKGMIAAGIRKTLDLKSLRLDTSSTFKIADLGCSTGP 76
M GG G +SYA NS Q +++ +K + A I ++ ++ IADLGCS+GP
Sbjct: 9 MKGGAGENSYAMNSFIQRQVISITKPITEAAITALYSGDTV----TTRLAIADLGCSSGP 64
Query: 77 NTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKY- 135
N A+ +I+ +E ++ + E ++P E+Q+F ND NDFN +F+S+P+
Sbjct: 65 NALFAVTELIKTVEELRKKMGRE---NSP---EYQIFLNDLPGNDFNAIFRSLPIENDVD 118
Query: 136 ---FATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHI-LCSGF 191
F GVPGSF+GRLFP ++LH H+S +L WLS++P I + N+G+I + +
Sbjct: 119 GVCFINGVPGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIES------NKGNIYMANTC 172
Query: 192 EKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGS 251
+ V AY QF+ D FL RAQE+VPGG ++LT R ST + L
Sbjct: 173 PQSVLNAYYKQFQEDHALFLRCRAQEVVPGG-RMVLTILGRRSEDRASTECCLIWQLLAM 231
Query: 252 CLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFTHPLVHMVYSA 311
L + + GLI EEK+D FN+P Y P E+ I + +F I+ H+ S
Sbjct: 232 ALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLID----------HIEASE 281
Query: 312 EFWASLSRAAFGG--------------------LVGQHFGYQFVDRIFNYYSTKLAENMS 351
+W+S ++ GG L+ HFG ++ +F+ Y + E MS
Sbjct: 282 IYWSSCTKDGDGGGSVEEEGYNVARCMRAVAEPLLLDHFGEAIIEDVFHRYKLLIIERMS 341
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Catalyzes the methylation of the free carboxyl end of the plant hormone salicylic acid (SA). Converts SA to SA methyl ester (MSA). The volatile compound MSA is hypothesized to act as an airborne signal that triggers defense responses in uninfected plants. MSA is an important chemoattractant for moth pollinated flowering plants. Clarkia breweri (taxid: 36903) EC: 2 EC: . EC: 1 EC: . EC: 1 EC: . EC: n EC: 9 |
| >sp|Q9FZN8|TCS1_CAMSI Caffeine synthase 1 OS=Camellia sinensis GN=TCS1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 179 bits (453), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 114/345 (33%), Positives = 180/345 (52%), Gaps = 26/345 (7%)
Query: 13 EAYPMVGGDGPHSYAKNSIYQEAIVNGSKGMIAAGIRKTLDLKSLRLDTSSTFKIADLGC 72
E M G+G SYA+NS + + + + ++ + + +TL + L ADLGC
Sbjct: 11 EVLFMNRGEGESSYAQNSSFTQQVASMAQPALENAV-ETLFSRDFHL---QALNAADLGC 66
Query: 73 STGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP-- 130
+ GPNTF I IK + +C N LE QV+ ND NDFNTLFK +
Sbjct: 67 AAGPNTF-------AVISTIKRMMEKKCRELNCQTLELQVYLNDLFGNDFNTLFKGLSSE 119
Query: 131 -LSKKY-----FATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRG 184
+ K + GVPGSFHGRLFP +SLH+ H+S ++ WL++ PK +T+ A N+G
Sbjct: 120 VIGNKCEEVPCYVMGVPGSFHGRLFPRNSLHLVHSSYSVHWLTQAPKGLTSREGLALNKG 179
Query: 185 HILCSGFEKEVA-EAYSAQFKNDIESFLNARAQELVPGGLLLLLTPTIRDGIPMFSTPEG 243
I S V EAY +QF D FLNAR+QE+VP G ++L+ + P
Sbjct: 180 KIYISKTSPPVVREAYLSQFHEDFTMFLNARSQEVVPNGCMVLILRGRQCSDPS-DMQSC 238
Query: 244 TNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFTHP 303
++ L + +L + GLI E+K+D+FN+P Y+ L E+ ++R+ +F+I+ + F
Sbjct: 239 FTWELLAMAIAELVSQGLIDEDKLDTFNIPSYFASLEEVKDIVERDGSFTIDHIEGFDLD 298
Query: 304 LVHMV-----YSAEFWASLSRAAFGGLVGQHFGYQFVDRIFNYYS 343
V M E + + RA ++ FG + +D++++ ++
Sbjct: 299 SVEMQENDKWVRGEKFTKVVRAFTEPIISNQFGPEIMDKLYDKFT 343
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Involved in the biosynthesis of caffeine. Catalyzes the conversion of 7-methylxanthine (7mX) to theobromine and of theobromine to caffeine. Has 3-N- and 1-N-methylation activity. Camellia sinensis (taxid: 4442) EC: 2 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 6 EC: 0 |
| >sp|Q9FYZ9|BAMT_ANTMA Benzoate carboxyl methyltransferase OS=Antirrhinum majus GN=BAMT PE=1 SV=1 | Back alignment and function description |
|---|
Score = 166 bits (420), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/359 (30%), Positives = 180/359 (50%), Gaps = 47/359 (13%)
Query: 18 VGGDGPHSYAKNSIYQEAIVNGSKGMIAAGIRKTLDLKSLRLDTSSTFKIADLGCSTGPN 77
+ GDG SYA NS Q+ +++ S ++ ++ D+ + FK+ D+GCS+GPN
Sbjct: 12 IAGDGETSYANNSGLQKVMMSKSLHVLDETLK---DIIGDHVGFPKCFKMMDMGCSSGPN 68
Query: 78 TFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSK-KYF 136
+ M II IE D E + EF+VF ND +NDFN LFK + F
Sbjct: 69 ALLVMSGIINTIE------DLYTEKNINELPEFEVFLNDLPDNDFNNLFKLLSHENGNCF 122
Query: 137 ATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHI-LCSGFEKEV 195
G+PGSF+GRL P+ SLH A++S ++ WLS++P+ + ++ NR +I + + EV
Sbjct: 123 VYGLPGSFYGRLLPKKSLHFAYSSYSIHWLSQVPEGLEDN-----NRQNIYMATESPPEV 177
Query: 196 AEAYSAQFKNDIESFLNARAQELVPGGLLLLL-------TPTIRDGIPMFSTPEGTNFDY 248
+AY+ Q++ D +FL R +E+VPGG ++L P+ +D + +F+
Sbjct: 178 YKAYAKQYERDFSTFLKLRGEEIVPGGRMVLTFNGRSVEDPSSKDDLAIFTL-------- 229
Query: 249 LGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTF-------- 300
L L D+ GL+ + + SFN+P+Y P E+ I +F+++ + F
Sbjct: 230 LAKTLVDMVAEGLVKMDDLYSFNIPIYSPCTREVEAAILSEGSFTLDRLEVFRVCWDASD 289
Query: 301 --------THPLVHMVYSAEFWASLSRAAFGGLVGQHFGYQFVDRIFNYYSTKLAENMS 351
+ S +F A RA ++ HFG +D +F Y+ K+ E++S
Sbjct: 290 YTDDDDQQDPSIFGKQRSGKFVADCVRAITEPMLASHFGSTIMDLLFGKYAKKIVEHLS 348
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Converts benzoic acid into the volatile ester methyl benzoates. This scent, mostly produced in a rhythmical, diurnal manner, attracts the pollinators. Antirrhinum majus (taxid: 4151) EC: 2 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|Q9AVK0|XMT1_COFAR 7-methylxanthosine synthase 1 OS=Coffea arabica GN=XMT1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 166 bits (420), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/356 (31%), Positives = 180/356 (50%), Gaps = 33/356 (9%)
Query: 13 EAYPMVGGDGPHSYAKNSIYQEAIVNGSKGMIAAGIRKTLDLKSLRLDTSSTFKIADLGC 72
E M GG+G SYAKNS Y + ++ K ++ +R+ L ++ + + K+ADLGC
Sbjct: 5 EVLRMNGGEGDTSYAKNSAYNQLVLAKVKPVLEQCVRELL--RANLPNINKCIKVADLGC 62
Query: 73 STGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP-- 130
++GPNT + +++I+++I+ + + E E Q+F ND NDFN++FK +P
Sbjct: 63 ASGPNTLLTVRDIVQSIDKVGQEKKNELERPT-----IQIFLNDLFPNDFNSVFKLLPSF 117
Query: 131 ---LSKK-------YFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPA 180
L K+ +PGSF+ RLFPE S+H H+ L WLS++P + +
Sbjct: 118 YRKLEKENGRKIGSCLIGAMPGSFYSRLFPEESMHFLHSCYCLQWLSQVPSGLVTELGIS 177
Query: 181 WNRGHILCSGFEK-EVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTPTIRDGIPMFS 239
N+G I S + V +AY QF D +FL ++EL G +LL I G+ + +
Sbjct: 178 TNKGSIYSSKASRLPVQKAYLDQFTKDFTTFLRIHSEELFSHGRMLL--TCICKGVELDA 235
Query: 240 TPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNT 299
D L + DL G + EEK+DSFN+P+Y P E+ ++ +F I + T
Sbjct: 236 R---NAIDLLEMAINDLVVEGHLEEEKLDSFNLPVYIPSAEEVKCIVEEEGSFEILYLET 292
Query: 300 FTHPLVHMVYS-------AEFWASLSRAAFGGLVGQHFGYQFVDRIFNYYSTKLAE 348
F L +S AE+ AS RA + ++ HFG + IF+ ++ A+
Sbjct: 293 FK-VLYDAGFSIDDEHIKAEYVASSVRAVYEPILASHFGEAIIPDIFHRFAKHAAK 347
|
Involved in the biosynthesis of caffeine. Specific for xanthosine and could not use xanthosine 5'-monophosphate (XMP) as substrate. Catalyzes the 7-N-methylation activity of xanthosine, but does not have 1-N- or 3-N-methylation activity. Coffea arabica (taxid: 13443) EC: 2 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 5 EC: 8 |
| >sp|A4GE69|XMT1_COFCA 7-methylxanthosine synthase 1 OS=Coffea canephora GN=XMT1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 165 bits (418), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 112/356 (31%), Positives = 179/356 (50%), Gaps = 33/356 (9%)
Query: 13 EAYPMVGGDGPHSYAKNSIYQEAIVNGSKGMIAAGIRKTLDLKSLRLDTSSTFKIADLGC 72
E M GG+G SYAKNS Y + ++ K ++ +R+ L ++ + + K+ADLGC
Sbjct: 5 EVLRMNGGEGDTSYAKNSAYNQLVLAKVKPVLEQCVRELL--RANLPNINKCIKVADLGC 62
Query: 73 STGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP-- 130
++GPNT + +++I+++I+ + + E E Q+F ND NDFN++FK +P
Sbjct: 63 ASGPNTLLTVRDIVQSIDKVGQEKKNELERPT-----IQIFLNDLFPNDFNSVFKLLPSF 117
Query: 131 ---LSKK-------YFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPA 180
L K+ +PGSF+ RLFPE S+H H+ L WLS++P +
Sbjct: 118 YRKLEKENGRKIGSCLIGAMPGSFYSRLFPEESMHFLHSCYCLQWLSQVPSGLVTELGIG 177
Query: 181 WNRGHILCSGFEK-EVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTPTIRDGIPMFS 239
N+G I S + V +AY QF D +FL ++EL G +LL I G+ + +
Sbjct: 178 TNKGSIYSSKASRLPVQKAYLDQFTKDFTTFLRIHSEELFSHGRMLL--TCICKGVELDA 235
Query: 240 TPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNT 299
D L + DL G + EEK+DSFN+P+Y P E+ ++ +F I + T
Sbjct: 236 R---NAIDLLEMAINDLVVEGHLEEEKLDSFNLPVYIPSAEEVKCIVEEEGSFEILYLET 292
Query: 300 FTHPLVHMVYS-------AEFWASLSRAAFGGLVGQHFGYQFVDRIFNYYSTKLAE 348
F L +S AE+ AS RA + ++ HFG + IF+ ++ A+
Sbjct: 293 FK-VLYDAGFSIDDEHIKAEYVASSVRAVYEPILASHFGEAIIPDIFHRFAKHAAK 347
|
Involved in the biosynthesis of caffeine. Specific for xanthosine. Cannot use xanthosine 5'-monophosphate (XMP) as substrate. Directly produces 7-methylxanthine, and therefore the methyl transfer and nucleoside cleavage may be coupled. Catalyzes the 7-N-methylation of xanthosine, but does not have 1-N- or 3-N-methylation activity. Coffea canephora (taxid: 49390) EC: 2 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 5 EC: 8 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 371 | ||||||
| 224069525 | 370 | predicted protein [Populus trichocarpa] | 0.959 | 0.962 | 0.509 | 1e-102 | |
| 224144825 | 351 | predicted protein [Populus trichocarpa] | 0.940 | 0.994 | 0.494 | 4e-94 | |
| 147833899 | 521 | hypothetical protein VITISV_030502 [Viti | 0.973 | 0.692 | 0.481 | 2e-87 | |
| 225424399 | 360 | PREDICTED: probable S-adenosylmethionine | 0.940 | 0.969 | 0.474 | 5e-87 | |
| 297737616 | 402 | unnamed protein product [Vitis vinifera] | 0.938 | 0.865 | 0.475 | 6e-87 | |
| 225424403 | 353 | PREDICTED: probable S-adenosylmethionine | 0.938 | 0.985 | 0.475 | 9e-87 | |
| 225466372 | 353 | PREDICTED: probable S-adenosylmethionine | 0.938 | 0.985 | 0.475 | 9e-87 | |
| 296087219 | 806 | unnamed protein product [Vitis vinifera] | 0.973 | 0.447 | 0.481 | 1e-86 | |
| 225462819 | 377 | PREDICTED: probable S-adenosylmethionine | 0.935 | 0.920 | 0.485 | 1e-85 | |
| 225424405 | 361 | PREDICTED: probable S-adenosylmethionine | 0.940 | 0.966 | 0.457 | 5e-85 |
| >gi|224069525|ref|XP_002302990.1| predicted protein [Populus trichocarpa] gi|222844716|gb|EEE82263.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/363 (50%), Positives = 258/363 (71%), Gaps = 7/363 (1%)
Query: 12 PEAYPMVGGDGPHSYAKNSIYQEAIVNGSKGMIAAGIRKTLDLKSLRLDTSS-TFKIADL 70
P+++ MVGGDGP SY +NS YQ+ +V+ SK + GI+ LD KSL D+S+ TF+IAD
Sbjct: 10 PKSWAMVGGDGPQSYTQNSAYQKGVVDASKEKVTEGIKDKLDFKSLGFDSSNDTFRIADF 69
Query: 71 GCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP 130
GCS GPNTF A++NIIEA+E KYQ + + P LEFQVFFND + NDFNTLFK++
Sbjct: 70 GCSVGPNTFFAVENIIEAVEQ-KYQ--AQFQKSPPLELEFQVFFNDVTTNDFNTLFKTLH 126
Query: 131 LSKKYFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSG 190
++KYFA G+PG+F+GRL P+S+LH A++S L WLSK+PKE+ +S SPAWN+G I C G
Sbjct: 127 SNRKYFAAGLPGTFYGRLLPKSTLHFAYSSYCLQWLSKVPKEVVDSKSPAWNKGSIQCDG 186
Query: 191 FEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLG 250
+KEV +AYSAQF++D+ +FLNARAQE+V GGL++++ + DGI M G ++ LG
Sbjct: 187 LKKEVTKAYSAQFQSDMNTFLNARAQEIVGGGLMVIIMAGLPDGIFMSQAGVGMYYELLG 246
Query: 251 SCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFTHPLVHMVYS 310
SCL D+A +G I+EEKVDSFN+P+YY E+ IK N NF+IEIM++ +H +
Sbjct: 247 SCLVDMAKLGEISEEKVDSFNLPLYYSSSTEIEEIIKENGNFNIEIMDSLSHQIWKTSKK 306
Query: 311 AEFWASLS--RAAFGGLVGQHFGYQFVDRIFNYYSTKLAENMSSICDGKTQDKIELFVLL 368
+ S+S RA F GLV +HFG + V++ F +++ KL +N SI DG + I+ F+LL
Sbjct: 307 SNIEVSVSGGRAVFQGLVEEHFGSEVVEKTFEHFAKKLVDNF-SIFDGAAHEHIDHFILL 365
Query: 369 RRN 371
+R+
Sbjct: 366 KRH 368
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224144825|ref|XP_002336178.1| predicted protein [Populus trichocarpa] gi|222875362|gb|EEF12493.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 351 bits (900), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 176/356 (49%), Positives = 245/356 (68%), Gaps = 7/356 (1%)
Query: 17 MVGGDGPHSYAKNSIYQEAIVNGSKGMIAAGIRKTLDLKSLRLDTSS--TFKIADLGCST 74
MVGGDGP SYA+NS YQ + ++ GI+ L+ S D+S+ TF+IAD GCS
Sbjct: 1 MVGGDGPRSYAQNSSYQRGGLVIVNELMNEGIKDKLEFISPCSDSSNICTFRIADFGCSA 60
Query: 75 GPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKK 134
GPNTF+AM+ IIEA+E KY + N LEFQVFFND + NDFNTLFK++PL +K
Sbjct: 61 GPNTFLAMEKIIEAVEQ-KYH----AQFKNSPPLEFQVFFNDVTTNDFNTLFKTLPLYQK 115
Query: 135 YFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKE 194
YFA GVPG+F+GRLFP+S+L +A++S +L WLSK+P+E+ ++ SPAWN+G I CSG KE
Sbjct: 116 YFAAGVPGTFYGRLFPKSTLRLAYSSYSLHWLSKVPEEVVDTKSPAWNKGSIQCSGTAKE 175
Query: 195 VAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLY 254
VA+AYSAQFK D+++FLNARAQE++ GGL++++ + DGI + T G +++ GSCL
Sbjct: 176 VAKAYSAQFKTDMDNFLNARAQEIIGGGLMVIIILGLPDGILLSQTVAGKSYELFGSCLI 235
Query: 255 DLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFTHPLVHMVYSAEFW 314
D+A +G+I+EEKVD+FN+P+YY EL IK + +F IE +N HP++ +
Sbjct: 236 DMAKLGVISEEKVDTFNLPLYYSSAKELEEIIKNHGHFCIERLNMLNHPMMKRKIDVQSH 295
Query: 315 ASLSRAAFGGLVGQHFGYQFVDRIFNYYSTKLAENMSSICDGKTQDKIELFVLLRR 370
S R+ F GL+ HFG VD+I Y++ KLAEN S+ + +E F+LL+R
Sbjct: 296 ISQFRSIFQGLLEAHFGRDDVDKILEYHAKKLAENYDSVFNVAKHQHVEHFILLKR 351
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147833899|emb|CAN73170.1| hypothetical protein VITISV_030502 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 178/370 (48%), Positives = 235/370 (63%), Gaps = 9/370 (2%)
Query: 1 MVHNTFVSNISPEAYPMVGGDGPHSYAKNSIYQEAIVNGSKGMIAAGIRKTLDLKSLRLD 60
M+ + VSN E+Y M GDGP+SYAK S YQ+AIV+ +K M+ I LD+ +
Sbjct: 131 MLMDKEVSN--GESYHMNSGDGPYSYAKYSSYQKAIVDAAKKMLVEAISDNLDINNPSFG 188
Query: 61 TSSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNN 120
+S+T +IAD+GCS GPN FIA+QNI+EA+ L KYQ P LEF VFFNDH N
Sbjct: 189 SSNTLRIADMGCSIGPNAFIAVQNIVEAVTL-KYQ----SMQQKPQALEFHVFFNDHXAN 243
Query: 121 DFNTLFKSVPLSKKYFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPA 180
DFN LF+S+P S+ YFA GVPGSFHGRLFP+SSLH+ H+S AL WLSK+PKE+ N
Sbjct: 244 DFNALFRSLPPSRPYFAVGVPGSFHGRLFPKSSLHIVHSSYALHWLSKVPKEVMEJNFLG 303
Query: 181 WNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTPTIRDGIPMFST 240
G S ++EV E +S+Q+K D++SFL ARAQELV GGL++LL +++G T
Sbjct: 304 LKNGRNY-STTDEEVLEVFSSQYKRDMQSFLTARAQELVGGGLMVLLVTGMQNGAIFSKT 362
Query: 241 PEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTF 300
G F+ GSCL D+AN GL++ EKV SF+ P+YY EL I+ N F+IE +
Sbjct: 363 CSGMVFNLFGSCLMDMANAGLVSNEKVYSFHFPLYYTTPKELEALIETNGYFNIERIEIL 422
Query: 301 THPLVHMVYSAEFWASLSRAAFGGLVGQHFGYQFVDRIFNYYSTKLAENMSSICDGKTQD 360
PL H + + RAA GLV +HFG + ++ +F Y+ KL EN S I D + +
Sbjct: 423 ARPLEHELPDYRICSFHLRAAMEGLVEEHFGKEIIEDLFERYTNKLGEN-SFIFDEEYRK 481
Query: 361 KIELFVLLRR 370
+ LFV LRR
Sbjct: 482 ETHLFVFLRR 491
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225424399|ref|XP_002281366.1| PREDICTED: probable S-adenosylmethionine-dependent methyltransferase At5g37990 [Vitis vinifera] gi|297737618|emb|CBI26819.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 327 bits (838), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 170/358 (47%), Positives = 228/358 (63%), Gaps = 9/358 (2%)
Query: 13 EAYPMVGGDGPHSYAKNSIYQEAIVNGSKGMIAAGIRKTLDLKSLRLDTSSTFKIADLGC 72
+++PM GGDGPHSY NS Q N S+ I I K LD+K +S+ F++ADLGC
Sbjct: 11 QSFPMNGGDGPHSYLNNSHLQRQATNASRITIEEAIAKKLDVKCF---SSNPFRLADLGC 67
Query: 73 STGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLS 132
S GPNTFIAMQ+I+EA+E + E EFQVFFNDH NDFNTLF S+P
Sbjct: 68 SVGPNTFIAMQHIVEAVERKYLAQGLKSEMP-----EFQVFFNDHVANDFNTLFASLPTE 122
Query: 133 KKYFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFE 192
++YFA GVPGSFHGRLFPESS+H +S+AL WLSK+P+E+ + NSPAWNRG I +
Sbjct: 123 RRYFACGVPGSFHGRLFPESSIHFMFSSHALHWLSKVPEELLDKNSPAWNRGRIHYTSGP 182
Query: 193 KEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSC 252
+EV+ AY+AQF++D+E FL+ARA+ELV GG+++LL P + GIP P G FD LGS
Sbjct: 183 EEVSHAYAAQFEHDMEIFLSARAKELVFGGMIVLLIPALPTGIPTSHIPIGIMFDLLGSS 242
Query: 253 LYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFTHPLVHMVYSAE 312
L D+A GLI+E +VDSFN+P+Y L ++ ++RN IE M H+ S +
Sbjct: 243 LMDMAKEGLISEAEVDSFNLPIYATSLEQMTSLVERNGYLIIERMELMDPTSKHVAVSGK 302
Query: 313 FWASLSRAAFGGLVGQHFGYQFVDRIFNYYSTKLAENMSSICDGKTQDKIELFVLLRR 370
+ RA G+ G+HFG +D +F+ K E S + ++ +LFV+LRR
Sbjct: 303 DYTMNFRAGMEGIFGEHFGSGIIDEVFDRLYKKTVE-FSHQLESSHKEGTQLFVVLRR 359
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297737616|emb|CBI26817.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 327 bits (838), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 171/360 (47%), Positives = 237/360 (65%), Gaps = 12/360 (3%)
Query: 13 EAYPMVGGDGPHSYAKNSIYQEAIVNGSKGMIAAGIRKTLDLKSLRLDTSSTFKIADLGC 72
+++PM GGDGPHSY NS +Q +N S+ MI I K LD+K +S+ F++A+LGC
Sbjct: 52 QSFPMNGGDGPHSYRNNSHFQRQDMNVSRTMIEEAIAKKLDVKCF---SSNPFRLANLGC 108
Query: 73 STGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLS 132
S GPNTFIAMQ+I+EA+E + E EFQVFFNDH NDFNTLF S+P
Sbjct: 109 SVGPNTFIAMQHIVEAVERRYLVQGLKSEMP-----EFQVFFNDHVGNDFNTLFASLPTE 163
Query: 133 KKYFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFE 192
++YFA GVPGSFHGRLFPESS+H +S+AL WLSK+P+E+ + NSPAWNRG I +
Sbjct: 164 RRYFACGVPGSFHGRLFPESSIHFMFSSHALHWLSKVPEELLDKNSPAWNRGRIHYTSGP 223
Query: 193 KEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSC 252
+EV+ AY+AQF++D+E FL+ARA+ELV GG+++ L + +GIP P G FD LGSC
Sbjct: 224 EEVSHAYAAQFEHDMEIFLSARAKELVVGGMIVFLILALPNGIPASQNPYGIMFDLLGSC 283
Query: 253 LYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFT--HPLVHMVYS 310
L D+A GLI+E +VDSFN+P++ ++ ++RN+ +IE M LV +
Sbjct: 284 LMDMAKEGLISEAQVDSFNLPIHLASPEQMTELVERNECLTIERMELVNSRSKLVGPING 343
Query: 311 AEFWASLSRAAFGGLVGQHFGYQFVDRIFNYYSTKLAENMSSICDGKTQDKIELFVLLRR 370
E+ L RA G+ QHFG +D++F+ +S K+ E+ + G ++ I LFV+LRR
Sbjct: 344 KEYAMYL-RAGLEGIFAQHFGSGIIDQLFDSFSKKIMESSHQLESG-NKEGILLFVVLRR 401
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225424403|ref|XP_002281406.1| PREDICTED: probable S-adenosylmethionine-dependent methyltransferase At5g37990 [Vitis vinifera] gi|297737615|emb|CBI26816.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 326 bits (836), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 171/360 (47%), Positives = 235/360 (65%), Gaps = 12/360 (3%)
Query: 13 EAYPMVGGDGPHSYAKNSIYQEAIVNGSKGMIAAGIRKTLDLKSLRLDTSSTFKIADLGC 72
+++PM GGDGPHSY NS +Q +N S+ MI I K LD+K +S+ F++ADLGC
Sbjct: 3 QSFPMNGGDGPHSYRNNSHFQRQDMNVSRTMIEEAIAKKLDVKCF---SSNPFRLADLGC 59
Query: 73 STGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLS 132
S GPNTFIAMQ+I+EA+E + E EFQVFFNDH NDFNTLF S+P
Sbjct: 60 SVGPNTFIAMQHIVEAVERRYLAQGLKSEMP-----EFQVFFNDHVGNDFNTLFASLPTE 114
Query: 133 KKYFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFE 192
++YFA GVPGSFHGRLFPESS+H +S+AL WLSK+P+E+ + NSPAWNRG I +
Sbjct: 115 RRYFACGVPGSFHGRLFPESSIHFMFSSHALHWLSKVPEELLDKNSPAWNRGRIHYTSGP 174
Query: 193 KEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSC 252
+EV+ AY+AQF++D+E FL+ARA+ELV GG++++L P + +GIP P G FD LGS
Sbjct: 175 EEVSHAYAAQFEHDMEIFLSARAKELVVGGMIVVLIPALPNGIPASQNPYGVMFDLLGSS 234
Query: 253 LYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFT--HPLVHMVYS 310
L D+A GLI+E +VDSFN+P++ ++ ++RN+ +IE M LV +
Sbjct: 235 LMDMAKEGLISEAQVDSFNLPIHLASPEQMTELVERNECLTIERMELVNSRSKLVGPING 294
Query: 311 AEFWASLSRAAFGGLVGQHFGYQFVDRIFNYYSTKLAENMSSICDGKTQDKIELFVLLRR 370
E A RA G+ QHFG +D++F+ S K+ E+ + G + + LFV+LRR
Sbjct: 295 KE-CAMYLRAGLEGIFAQHFGSGIIDQLFDRLSKKIMESSHKLESGNKEGNL-LFVVLRR 352
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225466372|ref|XP_002276659.1| PREDICTED: probable S-adenosylmethionine-dependent methyltransferase At5g37990 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 326 bits (836), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 171/360 (47%), Positives = 237/360 (65%), Gaps = 12/360 (3%)
Query: 13 EAYPMVGGDGPHSYAKNSIYQEAIVNGSKGMIAAGIRKTLDLKSLRLDTSSTFKIADLGC 72
+++PM GGDGPHSY NS +Q +N S+ MI I K LD+K +S+ F++A+LGC
Sbjct: 3 QSFPMNGGDGPHSYRNNSHFQRQDMNVSRTMIEEAIAKKLDVKCF---SSNPFRLANLGC 59
Query: 73 STGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLS 132
S GPNTFIAMQ+I+EA+E + E EFQVFFNDH NDFNTLF S+P
Sbjct: 60 SVGPNTFIAMQHIVEAVERRYLVQGLKSEMP-----EFQVFFNDHVGNDFNTLFASLPTE 114
Query: 133 KKYFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFE 192
++YFA GVPGSFHGRLFPESS+H +S+AL WLSK+P+E+ + NSPAWNRG I +
Sbjct: 115 RRYFACGVPGSFHGRLFPESSIHFMFSSHALHWLSKVPEELLDKNSPAWNRGRIHYTSGP 174
Query: 193 KEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSC 252
+EV+ AY+AQF++D+E FL+ARA+ELV GG+++ L + +GIP P G FD LGSC
Sbjct: 175 EEVSHAYAAQFEHDMEIFLSARAKELVVGGMIVFLILALPNGIPASQNPYGIMFDLLGSC 234
Query: 253 LYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFT--HPLVHMVYS 310
L D+A GLI+E +VDSFN+P++ ++ ++RN+ +IE M LV +
Sbjct: 235 LMDMAKEGLISEAQVDSFNLPIHLASPEQMTELVERNECLTIERMELVNSRSKLVGPING 294
Query: 311 AEFWASLSRAAFGGLVGQHFGYQFVDRIFNYYSTKLAENMSSICDGKTQDKIELFVLLRR 370
E+ L RA G+ QHFG +D++F+ +S K+ E+ + G ++ I LFV+LRR
Sbjct: 295 KEYAMYL-RAGLEGIFAQHFGSGIIDQLFDSFSKKIMESSHQLESG-NKEGILLFVVLRR 352
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296087219|emb|CBI33593.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 326 bits (835), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 178/370 (48%), Positives = 235/370 (63%), Gaps = 9/370 (2%)
Query: 1 MVHNTFVSNISPEAYPMVGGDGPHSYAKNSIYQEAIVNGSKGMIAAGIRKTLDLKSLRLD 60
M+ + VSN E+Y M GDGP+SYAK S YQ+AIV+ +K M+ I LD+ +
Sbjct: 416 MLMDKEVSN--GESYHMNSGDGPYSYAKYSSYQKAIVDAAKKMLVEAISDNLDINNPSFG 473
Query: 61 TSSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNN 120
+S+T +IAD+GCS GPN FIA+QNI+EA+ L KYQ P LEF VFFNDH N
Sbjct: 474 SSNTLRIADMGCSIGPNAFIAVQNIVEAVTL-KYQS----MQQKPQALEFHVFFNDHIAN 528
Query: 121 DFNTLFKSVPLSKKYFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPA 180
DFN LF+S+P S+ YFA GVPGSFHGRLFP+SSLH+ H+S AL WLSK+PKE+ N
Sbjct: 529 DFNALFRSLPPSRPYFAVGVPGSFHGRLFPKSSLHIVHSSYALHWLSKVPKEVMEINFLG 588
Query: 181 WNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTPTIRDGIPMFST 240
G S ++EV E +S+Q+K D++SFL ARAQELV GGL++LL +++G T
Sbjct: 589 LKNGRNY-STTDEEVLEVFSSQYKRDMQSFLTARAQELVGGGLMVLLVTGMQNGAIFSKT 647
Query: 241 PEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTF 300
G F+ GSCL D+AN GL++ EKV SF+ P+YY EL I+ N F+IE +
Sbjct: 648 CSGMVFNLFGSCLMDMANAGLVSNEKVYSFHFPLYYTTPKELEALIETNGYFNIERIEIL 707
Query: 301 THPLVHMVYSAEFWASLSRAAFGGLVGQHFGYQFVDRIFNYYSTKLAENMSSICDGKTQD 360
PL H + + RAA GLV +HFG + ++ +F Y+ KL EN S I D + +
Sbjct: 708 ARPLEHELPDYRICSFHLRAAMEGLVEEHFGKEIIEDLFERYTNKLGEN-SFIFDEEYRK 766
Query: 361 KIELFVLLRR 370
+ LFV LRR
Sbjct: 767 ETHLFVFLRR 776
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225462819|ref|XP_002266476.1| PREDICTED: probable S-adenosylmethionine-dependent methyltransferase At5g37990 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 322 bits (826), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 172/354 (48%), Positives = 226/354 (63%), Gaps = 7/354 (1%)
Query: 17 MVGGDGPHSYAKNSIYQEAIVNGSKGMIAAGIRKTLDLKSLRLDTSSTFKIADLGCSTGP 76
M GDGP+SYAK S YQ+AIV+ +K M+ I LD+ + +S+T +IAD+GCS GP
Sbjct: 1 MNSGDGPYSYAKYSSYQKAIVDAAKKMLVEAISDNLDINNPSFGSSNTLRIADMGCSIGP 60
Query: 77 NTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYF 136
N FIA+QNI+EA+ L KYQ P LEF VFFNDH NDFN LF+S+P S+ YF
Sbjct: 61 NAFIAVQNIVEAVTL-KYQ----SMQQKPQALEFHVFFNDHIANDFNALFRSLPPSRPYF 115
Query: 137 ATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVA 196
A GVPGSFHGRLFP+SSLH+ H+S AL WLSK+PKE+ N G S ++EV
Sbjct: 116 AVGVPGSFHGRLFPKSSLHIVHSSYALHWLSKVPKEVMEINFLGLKNGRNY-STTDEEVL 174
Query: 197 EAYSAQFKNDIESFLNARAQELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDL 256
E +S+Q+K D++SFL ARAQELV GGL++LL +++G T G F+ GSCL D+
Sbjct: 175 EVFSSQYKRDMQSFLTARAQELVGGGLMVLLVTGMQNGAIFSKTCSGMVFNLFGSCLMDM 234
Query: 257 ANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFTHPLVHMVYSAEFWAS 316
AN GL++ EKV SF+ P+YY EL I+ N F+IE + PL H + +
Sbjct: 235 ANAGLVSNEKVYSFHFPLYYTTPKELEALIETNGYFNIERIEILARPLEHELPDYRICSF 294
Query: 317 LSRAAFGGLVGQHFGYQFVDRIFNYYSTKLAENMSSICDGKTQDKIELFVLLRR 370
RAA GLV +HFG + ++ +F Y+ KL EN S I D + + + LFV LRR
Sbjct: 295 HLRAAMEGLVEEHFGKEIIEDLFERYTNKLGEN-SFIFDEEYRKETHLFVFLRR 347
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225424405|ref|XP_002284898.1| PREDICTED: probable S-adenosylmethionine-dependent methyltransferase At5g37990-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 320 bits (821), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 165/361 (45%), Positives = 227/361 (62%), Gaps = 12/361 (3%)
Query: 13 EAYPMVGGDGPHSYAKNSIYQEAIVNGSKGMIAAGIRKTLDLKSLRLDTSSTFKIADLGC 72
+++PM GGDGPHSY NS Q + + MI I + LD+K +S+ F++ADLGC
Sbjct: 11 QSFPMKGGDGPHSYVNNSHLQREATDACRTMIEEAIAQKLDVKCF---SSNPFRLADLGC 67
Query: 73 STGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLS 132
S GPNTFI+MQ+I+EA+E + + + EFQVFFNDH NDFNTLF S+P
Sbjct: 68 SVGPNTFISMQHIVEAVERKYLEQGLKSQIP-----EFQVFFNDHVANDFNTLFASLPTE 122
Query: 133 KKYFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFE 192
++YFA GVPGSFHGRLFPESS+H +S+A+ WLSK+P+E+ + NSPAWNRG I +
Sbjct: 123 RRYFACGVPGSFHGRLFPESSIHFMFSSHAIHWLSKVPEELLDKNSPAWNRGRIHYTSAP 182
Query: 193 KEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSC 252
EV+ AY+AQF +D+E FL+ARA+ELV GG+++L + +GIP P G FD LG+
Sbjct: 183 DEVSHAYAAQFDHDMEIFLSARAKELVVGGIIVLTMAALPNGIPASRIPSGVMFDLLGAS 242
Query: 253 LYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTF--THPLVHMVYS 310
L D+ GLI E +VDSFN+P+Y P ++ +KRN F+IE M LV +
Sbjct: 243 LMDMTKAGLINEAQVDSFNLPVYAPSQEQMTDLVKRNGCFTIERMELVYRASKLVAPITG 302
Query: 311 AEFWASLSRAAFGGLVGQHFGYQFVDRIFNYYSTKLAENMSSICDGKTQDKIELFVLLRR 370
E L RA G++ +HFG +D +F+ +S K E S + T++ +LF LRR
Sbjct: 303 KECGMHL-RAGMEGMIAKHFGSGIIDELFDTFSKKSVE-FSHQLESSTREGAQLFAALRR 360
Query: 371 N 371
Sbjct: 361 K 361
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 371 | ||||||
| TAIR|locus:2166640 | 361 | AT5G38780 [Arabidopsis thalian | 0.956 | 0.983 | 0.428 | 7.3e-75 | |
| TAIR|locus:2144461 | 359 | AT5G38100 [Arabidopsis thalian | 0.900 | 0.930 | 0.416 | 6.3e-69 | |
| TAIR|locus:2082112 | 348 | FAMT "farnesoic acid carboxyl- | 0.929 | 0.991 | 0.421 | 1.3e-68 | |
| TAIR|locus:2082117 | 379 | AT3G44870 "AT3G44870" [Arabido | 0.921 | 0.902 | 0.418 | 3.5e-68 | |
| TAIR|locus:2082157 | 348 | AT3G44840 [Arabidopsis thalian | 0.924 | 0.985 | 0.418 | 9.2e-68 | |
| TAIR|locus:504956193 | 351 | AT1G15125 [Arabidopsis thalian | 0.929 | 0.982 | 0.421 | 5.2e-65 | |
| TAIR|locus:2033409 | 353 | PXMT1 [Arabidopsis thaliana (t | 0.927 | 0.974 | 0.384 | 2e-63 | |
| TAIR|locus:2033389 | 352 | AT1G66720 [Arabidopsis thalian | 0.940 | 0.991 | 0.387 | 1.1e-62 | |
| TAIR|locus:2033414 | 353 | AT1G66690 "AT1G66690" [Arabido | 0.929 | 0.977 | 0.371 | 1.5e-60 | |
| TAIR|locus:2200186 | 363 | AT1G68040 [Arabidopsis thalian | 0.932 | 0.953 | 0.380 | 1.3e-59 |
| TAIR|locus:2166640 AT5G38780 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 755 (270.8 bits), Expect = 7.3e-75, P = 7.3e-75
Identities = 155/362 (42%), Positives = 228/362 (62%)
Query: 11 SPEAYPMVGGDGPHSYAKNSIYQEAIVNGSKGMIAAGIRKTLDLKSLRLDTSSTFKIADL 70
S ++YPM GGD HSY NS YQ+A ++G + I + LDL ++ + S TF IAD
Sbjct: 4 SSQSYPMSGGDDQHSYIHNSSYQKAGIDGVQEKARQYILENLDLLNMNPNLS-TFTIADF 62
Query: 71 GCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP 130
GCS GPNTF A+QNII+ ++L K+ + + E + LEFQV+FND NNDFNTLF++ P
Sbjct: 63 GCSIGPNTFHAVQNIIDIVKL-KHLKESQ-EDSRVAPLEFQVYFNDLPNNDFNTLFRTQP 120
Query: 131 LSKK--YFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILC 188
S K YF+ GVPGSF+GR+ P +S+H+ +TS WLSK+P+E+ + NS AWN+ +I C
Sbjct: 121 PSSKQEYFSVGVPGSFYGRVLPRNSIHIGNTSFTTHWLSKVPEEVCDKNSLAWNKNYIHC 180
Query: 189 SGFEKEVAEAYSAQFKNDIESFLNARAQELVXXXXXXXXXXXIRDGIPMFSTPEGTNFDY 248
+ +EV EAY QF+ D+ FL ARA+ELV + DG+ M+ T G D
Sbjct: 181 NNLIEEVTEAYKVQFEKDMGVFLKARAEELVPGGLMITLGQCLPDGVAMYETWSGIVKDT 240
Query: 249 LGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFTHPLVHMV 308
+G CL D+A +G+ EEK++ FN+P+Y+P + EL G I++N F+IE+M +HPL +
Sbjct: 241 IGDCLQDMATLGVTTEEKIEMFNLPVYFPQVSELKGAIEQNIRFTIEMMEIVSHPLEAVQ 300
Query: 309 YSAEFWASLSRAAFGGLVGQHFGYQFVDRIFNYYSTKLAENMSSICDGKTQDKIELFVLL 368
S F S+ RA ++ +HFG VD +F ++ KL+E+ I K + ++ ++L
Sbjct: 301 LSNNFITSMYRAILSTVIERHFGGSVVDELFRQFAKKLSEH--PIDFEKCKKQMVYHIVL 358
Query: 369 RR 370
+R
Sbjct: 359 KR 360
|
|
| TAIR|locus:2144461 AT5G38100 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 699 (251.1 bits), Expect = 6.3e-69, P = 6.3e-69
Identities = 142/341 (41%), Positives = 208/341 (60%)
Query: 11 SPEAYPMVGGDGPHSYAKNSIYQEAIVNGSKGMIAAGIRKTLDLKSLRLDTSSTFKIADL 70
S YPM G HSY NS YQ+A ++ + I + LDL+ L D TF+IAD
Sbjct: 4 SSHMYPMSSGHDQHSYIHNSSYQKAAISSAVEKTRRCIFEKLDLQ-LSSDFG-TFRIADF 61
Query: 71 GCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP 130
GCS GPNTF Q+II+ ++ + ++ E ++ LEFQVFFND NDFNTLF++ P
Sbjct: 62 GCSIGPNTFHVAQSIIDTVKSKRLEESTE---NSLVPLEFQVFFNDQPTNDFNTLFRTQP 118
Query: 131 LS--KKYFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILC 188
LS ++YF+ GVPGSF+GR+ P +S+H+ HTS WLSK+P + + S AWN+ +I C
Sbjct: 119 LSPEREYFSVGVPGSFYGRVLPRNSIHIGHTSYTTHWLSKVPDNVCDKKSMAWNKNYIQC 178
Query: 189 SGFEKEVAEAYSAQFKNDIESFLNARAQELVXXXXXXXXXXXIRDGIPMFSTPEGTNFDY 248
+ +EV +AY QF D+E FL+ARA+ELV + DG+ ++ T +G D
Sbjct: 179 NNLLEEVTKAYKVQFIKDMEIFLDARAEELVPGGLMIVIGECLPDGVSLYETWQGYVMDT 238
Query: 249 LGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFTHPLVHMV 308
+G CL D+A G+ +EEK+D F++P+Y+P EL G I++N +F+IE+M T +HPL
Sbjct: 239 IGDCLMDMAKSGITSEEKIDLFSLPVYFPQFSELKGEIEKNGSFTIELMETTSHPLEGKP 298
Query: 309 YSAEFWASLSRAAFGGLVGQHFGYQFVDRIFNYYSTKLAEN 349
+ +F S RA ++ +HFG VD +F + KL+ +
Sbjct: 299 LTNDFITSTFRAFLTTIIEKHFGDGVVDELFYRLAKKLSNH 339
|
|
| TAIR|locus:2082112 FAMT "farnesoic acid carboxyl-O-methyltransferase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 696 (250.1 bits), Expect = 1.3e-68, P = 1.3e-68
Identities = 151/358 (42%), Positives = 216/358 (60%)
Query: 14 AYPMVGGDGPHSYAKNSIYQEAIVNGSKGMIAAGIRKTLDLKSLRLDTSSTFKIADLGCS 73
++ M+GG+GP+SY ++S YQ A+V +K I I LD+ TS+ IAD GCS
Sbjct: 4 SFTMIGGEGPNSYREHSKYQGALVIAAKEKINEAISTKLDIDF----TSNLVNIADFGCS 59
Query: 74 TGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSK 133
+GPNTF A+Q +I+A+E KY+ + E G+EFQVFFND SNNDFNTLFK++P ++
Sbjct: 60 SGPNTFTAVQTLIDAVEN-KYKKESNIE-----GIEFQVFFNDSSNNDFNTLFKTLPPAR 113
Query: 134 KYFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEK 193
YFA+GVPGSF GR+ P++SLHV +S +L ++SK+PKEI + +S WN+ I CSG K
Sbjct: 114 LYFASGVPGSFFGRVLPKNSLHVGVSSYSLHFVSKVPKEIKDRDSLVWNKD-IHCSGSSK 172
Query: 194 EVAEAYSAQFKNDIESFLNARAQELVXXXXXXXXXXXIRDGIPMFSTPEGTNFDYLGSCL 253
EV + Y Q+K D+ SFL ARAQELV G+ MF T EG D++GS L
Sbjct: 173 EVVKLYLGQYKIDVGSFLTARAQELVSGGLLLLLGSCRPTGVQMFETVEGMMIDFIGSSL 232
Query: 254 YDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFTHPLVHMVYSAEF 313
++AN GLI ++K+D+F +P+Y P + EL I+ NK F+IE +H E+
Sbjct: 233 NEIANQGLIDQQKLDTFKLPIYAPNVDELKQIIEDNKCFTIEAFEKISHAKGEYPLDPEY 292
Query: 314 WASLSRAAFGGLVGQHFGYQFVDRIFNYYSTKLAENMSSICDGKTQDKIELFVLLRRN 371
S + GG V FG +++ + K E + I K + ++ ++LRRN
Sbjct: 293 LTSAFKVTVGGSVASLFGQDGMEKTYELVKEKTQEMLPQIA--KAKPGMQYLIVLRRN 348
|
|
| TAIR|locus:2082117 AT3G44870 "AT3G44870" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 692 (248.7 bits), Expect = 3.5e-68, P = 3.5e-68
Identities = 150/358 (41%), Positives = 214/358 (59%)
Query: 14 AYPMVGGDGPHSYAKNSIYQEAIVNGSKGMIAAGIRKTLDLKSLRLDTSSTFKIADLGCS 73
++ M+GG+GP+SY +S YQ A+V +K I I LD+ TS+ IAD GCS
Sbjct: 4 SFTMIGGEGPNSYRDHSKYQGALVEAAKEKINEAISTKLDIDF----TSNLVNIADFGCS 59
Query: 74 TGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSK 133
+GPNTF A+Q +I+A+E KY+ + S +EFQVFFND SNNDFNTLFK++P ++
Sbjct: 60 SGPNTFTAVQTLIDAVEN-KYKKE--------SNIEFQVFFNDSSNNDFNTLFKTLPPAR 110
Query: 134 KYFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEK 193
YFA+GVPGSF GR+ P +SLH+ ++ +L ++SKIPKE+ + +SP WN+ I CSG K
Sbjct: 111 LYFASGVPGSFFGRVLPRNSLHLGVSAYSLHFISKIPKEVKDRDSPVWNKD-IHCSGSSK 169
Query: 194 EVAEAYSAQFKNDIESFLNARAQELVXXXXXXXXXXXIRDGIPMFSTPEGTNFDYLGSCL 253
EVA+ Y Q+K D+ SFLNARAQELV +G+ MF T EG D++G+ L
Sbjct: 170 EVAKLYLGQYKIDVGSFLNARAQELVSGGLLLLLGSCRPNGVQMFETVEGMMIDFIGASL 229
Query: 254 YDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFTHPLVHMVYSAEF 313
++AN GLI ++K+D+F +P+Y P EL I+ N F+IE+ H EF
Sbjct: 230 NEIANQGLIDQQKLDTFKLPIYAPQADELKQIIEDNGCFTIEVFENIIHAKGEYPLDPEF 289
Query: 314 WASLSRAAFGGLVGQHFGYQFVDRIFNYYSTKLAENMSSICDGKTQDKIELFVLLRRN 371
+ GG V FG +++ F K E + I K + ++ ++LRRN
Sbjct: 290 LTVSFKVTVGGSVASLFGQDGMEKTFELVKEKTQEMLPQIA--KAKPGMQYLIVLRRN 345
|
|
| TAIR|locus:2082157 AT3G44840 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 688 (247.2 bits), Expect = 9.2e-68, P = 9.2e-68
Identities = 150/358 (41%), Positives = 215/358 (60%)
Query: 14 AYPMVGGDGPHSYAKNSIYQEAIVNGSKGMIAAGIRKTLDLKSLRLDTSSTF-KIADLGC 72
++ M+GG+GP SY ++S YQ ++ + I + + K L +D +S IAD GC
Sbjct: 4 SFTMIGGEGPESYRQHSKYQGGLLEAA----TEKINEAISTK-LNIDLASNLVNIADFGC 58
Query: 73 STGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLS 132
STGPNTF A+Q II+A+E KYQ + +N +EFQVFFND SNNDFNTLFK++P +
Sbjct: 59 STGPNTFRAVQTIIDAVEH-KYQQE-----NNLEEIEFQVFFNDSSNNDFNTLFKTLPPA 112
Query: 133 KKYFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFE 192
+KYFATGVP SF GR+ P SSLHV +S +L +LSKIPK+I + +S AWN+ I C+GF
Sbjct: 113 RKYFATGVPASFFGRVLPRSSLHVGVSSYSLHFLSKIPKKIKDCDSHAWNKD-IHCTGFS 171
Query: 193 KEVAEAYSAQFKNDIESFLNARAQELVXXXXXXXXXXXIRDGIPMFSTPEGTNFDYLGSC 252
KEV AY Q+K D+ESFL ARAQELV + +G+ M T G D +GS
Sbjct: 172 KEVVRAYLDQYKIDMESFLTARAQELVSGGLLFLLGSCLPNGVQMSETLNGMMIDCIGSS 231
Query: 253 LYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFTHPLVHMVYSAE 312
L D+A GLI +EK+D+F +P+Y + GE+ I+ N ++IE + + + E
Sbjct: 232 LNDIAKQGLIDQEKLDTFKLPIYVAYAGEIKQIIEDNVYYTIERFDIISQENEEIPLDPE 291
Query: 313 FWASLSRAAFGGLVGQHFGYQFVDRIFNYYSTKLAENMSSICDGKTQDKIELFVLLRR 370
F + GG+V HFG +++ F TK E + + + K ++ ++L+R
Sbjct: 292 FLTVSFKVTVGGIVASHFGQHVMEKTFEVVKTKTQEMLPQLANAKPG--MQYLIVLKR 347
|
|
| TAIR|locus:504956193 AT1G15125 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 662 (238.1 bits), Expect = 5.2e-65, P = 5.2e-65
Identities = 150/356 (42%), Positives = 211/356 (59%)
Query: 17 MVGGDGPHSYAKNSIYQEAIVNGSKGMIAAGIRKTLDLKSLRLDTSSTFKIADLGCSTGP 76
M GGDG SYA+NS YQ + ++ ++ I LD+ + + S+F IAD GCS+GP
Sbjct: 1 MNGGDGASSYARNSSYQRGAIEAAEALLRNEINARLDITN---HSFSSFTIADFGCSSGP 57
Query: 77 NTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYF 136
NT IA+ II+A+ K+ N + +FQVFFND S+ DFN LF +P + YF
Sbjct: 58 NTVIAVDIIIQAL-YHKFTSSLP----NTTTPQFQVFFNDVSHTDFNALFALLPPQRPYF 112
Query: 137 ATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVA 196
GVPGSF+G LFP++ L++A++S AL WLS +P E+T+++SPA+NRG I +G EVA
Sbjct: 113 VAGVPGSFYGNLFPKAHLNLAYSSCALCWLSDLPSELTDTSSPAYNRGRIHYTGASAEVA 172
Query: 197 EAYSAQFKNDIESFLNARAQELVXXXXXXXXXXXIRDG-IPMFSTPEGTNFDYLGSCLYD 255
+AYS+Q+K DI+ FL+AR+QEL + DG + G+ FD LGSCL D
Sbjct: 173 QAYSSQYKKDIKLFLHARSQELAENGLMALIVPGVPDGFLDCQEASTGSEFDLLGSCLMD 232
Query: 256 LANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTF-THPLVHMVYSAEFW 314
+A G+I EE+V+SFN+P+YY EL I+ N I+ M T + + E
Sbjct: 233 MAKEGIIEEEEVNSFNLPIYYTTPKELEDIIRSNGELKIDKMETLGSMDAQDTMPDLESR 292
Query: 315 ASLSRAAFGGLVGQHFGYQFVDRIFNYYSTKLAENMSSICDGKTQDKIELFVLLRR 370
RA GLV HFG+Q +D +F+ Y+ KLA + S I +T I +F LL R
Sbjct: 293 VLYLRAVLEGLVRTHFGHQILDDLFDRYALKLAHS-SFILQPQTHKSIMIFALLSR 347
|
|
| TAIR|locus:2033409 PXMT1 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 647 (232.8 bits), Expect = 2.0e-63, P = 2.0e-63
Identities = 137/356 (38%), Positives = 205/356 (57%)
Query: 17 MVGGDGPHSYAKNSIYQEAIVNGSKGMIAAGIRKTLDLKSLRLDTSSTFKIADLGCSTGP 76
M+GGDGP SY + S YQ A++ +K + I LDL + S+ F +AD GC++GP
Sbjct: 9 MIGGDGPESYNQQSSYQRALLEATKDKMTKAISANLDLDLI----SNRFIVADFGCASGP 64
Query: 77 NTFIAMQNIIEAIELIKYQDDCECEHDNPS-GLEFQVFFNDHSNNDFNTLFKSVPLSKKY 135
NTF+A+QNII+A+E KY+ + NP+ +EFQV FND S NDFNTLF+++P ++Y
Sbjct: 65 NTFVAVQNIIDAVEE-KYRRETG---QNPADNIEFQVLFNDFSLNDFNTLFQTLPPGRRY 120
Query: 136 FATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEV 195
F+ GVPGSF R+ P+ S H+ S A + SKIPK I + +SP WN+ + C+GF V
Sbjct: 121 FSAGVPGSFFERVLPKESFHIGVMSYAFHFTSKIPKGIMDRDSPLWNKD-MQCTGFNPAV 179
Query: 196 AEAYSAQFKNDIESFLNARAQELVXXXXXXXXXXXIRDGIPMFSTPEGTNFDYLGSCLYD 255
+AY Q+ D + L+ARA+ELV +RDG+ M TP+GT D++G L D
Sbjct: 180 KKAYLDQYSIDTKILLDARAEELVPGGLMLLLGSCLRDGVKMSETPKGTVMDFIGESLSD 239
Query: 256 LANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFTHPLVHMVYSAEFWA 315
LA G+ +EKVD+F +Y+ GE+ I+ N F+IE H + + A
Sbjct: 240 LAKQGVTEQEKVDTFRTSIYFAEQGEIRQIIEENGKFTIEAFEDIIHAKNEFPFDPKTLA 299
Query: 316 SLSRAAFGGLVGQHFGYQFVDRIFNYYSTKLAENMSSICDGKTQDKIELFVLLRRN 371
+A +G + HFG + + + F K E +S + + K ++ ++LR+N
Sbjct: 300 ISFKAFYGAFISAHFGVEVMRKAFELVEVKAREQISRLHNSKPG--MQYLIVLRKN 353
|
|
| TAIR|locus:2033389 AT1G66720 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 640 (230.4 bits), Expect = 1.1e-62, P = 1.1e-62
Identities = 140/361 (38%), Positives = 211/361 (58%)
Query: 11 SPEAYPMVGGDGPHSYAKNSIYQEAIVNGSKGMIAAGIRKTLDLKSLRLDTSSTFKIADL 70
+PE + MVGG+GP SY ++S YQ ++ +K I A I L L + S+ F +AD
Sbjct: 4 TPE-WVMVGGEGPESYKQHSSYQRDLLKAAKDKINAVISTNLSLNLI----SNRFSVADF 58
Query: 71 GCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP 130
GC++GPNTF+A+QNII+A+E ++ + DN +EFQV FND SNNDFNTLF+ +P
Sbjct: 59 GCASGPNTFVAVQNIIDAVEEKYLRETGQNPDDN---IEFQVLFNDLSNNDFNTLFQGLP 115
Query: 131 LSKKYFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSG 190
++Y++ +PGSF R+ P+ S+H+ + A + SKIPK I++ NSP WNR + C+G
Sbjct: 116 SGRRYYSAAIPGSFFDRVLPKHSIHIGVMNYAFQFTSKIPKGISDRNSPLWNRD-MHCTG 174
Query: 191 FEKEVAEAYSAQFKNDIESFLNARAQELVXXXXXXXXXXXIRDGIPMFSTPEGTNFDYLG 250
F +V +AY QF D ++ L+ARA+ELV +RDGI M T G D +G
Sbjct: 175 FNNKVKKAYLDQFSLDSKNILDARAEELVPEGLMLLLGSCLRDGIKMSETYRGIVLDLIG 234
Query: 251 SCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFTHPLVHMVYS 310
+ L DLA G+I ++KV+SFN+ +Y GEL I+ N F+IE P +
Sbjct: 235 ASLNDLAQQGVIEKDKVESFNITLYIAEEGELRQIIEENGKFTIEAFEDIIQPNGESLDP 294
Query: 311 AEFWASLSRAAFGGLVGQHFGYQFVDRIFNYYSTKLAENMSSICDGKTQDKIELFVLLRR 370
SL ++AFGG++ HFG + + + F K + S + + K ++ ++LR+
Sbjct: 295 KILAVSL-KSAFGGILSAHFGAEAMMKAFELVEAKAHQEFSRLQNAKPT--MQYLIVLRK 351
Query: 371 N 371
N
Sbjct: 352 N 352
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| TAIR|locus:2033414 AT1G66690 "AT1G66690" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 620 (223.3 bits), Expect = 1.5e-60, P = 1.5e-60
Identities = 132/355 (37%), Positives = 201/355 (56%)
Query: 17 MVGGDGPHSYAKNSIYQEAIVNGSKGMIAAGIRKTLDLKSLRLDTSSTFKIADLGCSTGP 76
M+GG GP SY + S YQ A++ +K + I LDL + S+ F +AD GC++GP
Sbjct: 9 MIGGYGPESYNQQSSYQRALLEAAKDKMTEAISANLDLDLI----SNRFIVADFGCASGP 64
Query: 77 NTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYF 136
NTF+A+QNII+A+E ++ + DN +EFQV FND NDFNTLF+++P ++YF
Sbjct: 65 NTFVAVQNIIDAVEEKYLRETGQNPEDN---IEFQVLFNDLRINDFNTLFQTLPPGRRYF 121
Query: 137 ATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVA 196
+ GVPGSF R+ P+ S H+A S A + SKIPK I + +SP WN+ + C+GF V
Sbjct: 122 SAGVPGSFFNRVLPKQSFHIAVMSYAFLFTSKIPKGIMDRDSPLWNKD-MQCTGFNPAVK 180
Query: 197 EAYSAQFKNDIESFLNARAQELVXXXXXXXXXXXIRDGIPMFSTPEGTNFDYLGSCLYDL 256
+AY Q+ D ++ L+ARA+EL+ +RDG+ M T +GT D++G L DL
Sbjct: 181 KAYLEQYSIDTKNLLDARAEELMPGGLMLLLGSCMRDGVKMSETLKGTVMDFIGESLNDL 240
Query: 257 ANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFTHPLVHMVYSAEFWAS 316
A G+ +EKVD+F +Y+ GE+ I+ N F+IE H + A
Sbjct: 241 AQKGVTEQEKVDTFKTSIYFAEQGEIRQIIEENGKFTIEAFEDIIHSKNEFPLDPKTLAI 300
Query: 317 LSRAAFGGLVGQHFGYQFVDRIFNYYSTKLAENMSSICDGKTQDKIELFVLLRRN 371
+A +G + HFG + + + F K E +S + K + ++ ++LR+N
Sbjct: 301 SFKALYGAFISAHFGIEVMRKAFELVEVKAREQISRL--HKVKPGMQYLIVLRKN 353
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| TAIR|locus:2200186 AT1G68040 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 611 (220.1 bits), Expect = 1.3e-59, P = 1.3e-59
Identities = 137/360 (38%), Positives = 196/360 (54%)
Query: 16 PMVGGDGPHSYAKNSIYQEAIVNGSKGMIAAGIRKTLDLKSLRLDTSSTFKIADLGCSTG 75
PM GGDGP+SY+KNS Q + K I + + L+ K+L S+TF+IADLGC+TG
Sbjct: 12 PMSGGDGPNSYSKNSHLQRKTTSLLKEKIDKLVLEKLNAKTLISSDSNTFRIADLGCATG 71
Query: 76 PNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKY 135
PNTF + NII++IE N S EF VFFND NDFNTLF S+P + Y
Sbjct: 72 PNTFFLVDNIIKSIET-------SLRKSNSSKPEFLVFFNDLPQNDFNTLFTSLPQDRSY 124
Query: 136 FATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEV 195
A GVPGSF+GR+ P+SS+H+ T A WLS +PKE+ + +S AWN+G + S EV
Sbjct: 125 LAVGVPGSFYGRVLPQSSVHIVVTMGATHWLSSVPKEVLDKSSKAWNKGKVHYSNAADEV 184
Query: 196 AEAYSAQFKNDIESFLNARAQELVXXXXXXXXXXXIRDGIPMFSTPEGTNFDYLGSCLYD 255
+AY QF D+E FL ARA E+V I G+P + + + + L
Sbjct: 185 VKAYRDQFGRDMEKFLEARATEIVSGGLLVVGMCGIPKGMPFSNLADSIMYTSMADVLTQ 244
Query: 256 LANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFTHPLVHM-----VYS 310
+ + GLI+EE+VD+FN+P+Y E+ + +N F++E M P + V
Sbjct: 245 MHSEGLISEEQVDTFNIPIYSATPEEVTVLVVKNGCFTVESMELMD-PTAWLKRPTNVED 303
Query: 311 AEFWASLSRAAFGGLVGQHFGYQFVDRIFNYYSTKLAENMSSICDGKTQDKIELFVLLRR 370
W +A G L HFG +D +F+ + KL ++ + ++K+ LF L+R
Sbjct: 304 VRHWMVCIKATMGSLFINHFGEHLLDDVFDRLTAKLV-GLTEKIESSYREKVMLFFALQR 362
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9FKR0 | MT878_ARATH | 2, ., 1, ., 1, ., - | 0.4419 | 0.9568 | 0.9833 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 4th Layer | 2.1.1.141 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | gw1.II.2664.1 | annotation not avaliable (352 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 371 | |||
| pfam03492 | 331 | pfam03492, Methyltransf_7, SAM dependent carboxyl | 1e-120 | |
| PLN02668 | 386 | PLN02668, PLN02668, indole-3-acetate carboxyl meth | 3e-56 |
| >gnl|CDD|217591 pfam03492, Methyltransf_7, SAM dependent carboxyl methyltransferase | Back alignment and domain information |
|---|
Score = 351 bits (902), Expect = e-120
Identities = 142/339 (41%), Positives = 198/339 (58%), Gaps = 23/339 (6%)
Query: 48 IRKTLDLKSLRLDTSSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSG 107
+ + + LR ++ KIADLGCS+GPNTF+A+ NII+ +E KYQ E + P
Sbjct: 1 LEEAISELLLRNLFPNSIKIADLGCSSGPNTFLAVSNIIDTVEK-KYQK--ENILEPP-- 55
Query: 108 LEFQVFFNDHSNNDFNTLFKSVP----LSKKYFATGVPGSFHGRLFPESSLHVAHTSNAL 163
EFQVFFND +NDFNTLFK +P + YF +GVPGSF+GRLFP +SLH H+S +L
Sbjct: 56 -EFQVFFNDLPSNDFNTLFKLLPPFQKKKRSYFVSGVPGSFYGRLFPRNSLHFVHSSYSL 114
Query: 164 PWLSKIPKEITNSNSPAWNRGHILCSGFE-KEVAEAYSAQFKNDIESFLNARAQELVPGG 222
WLS++PK + + SPAWN+G+I SG +EV +AY QFK D FL ARA+ELV GG
Sbjct: 115 HWLSQVPKGLEDKESPAWNKGNIYISGASPEEVYKAYLDQFKKDFSLFLRARAEELVSGG 174
Query: 223 LLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGEL 282
L++L + T G +D LG L DL + GLI EEK+DSFN+P+Y P E+
Sbjct: 175 LMVLTFLGRPS-VDPSETECGIFWDLLGDALNDLVSEGLIEEEKLDSFNIPIYAPSPEEV 233
Query: 283 MGHIKRNKNFSIEIMNTFTHPLVHMVYSA----------EFWASLSRAAFGGLVGQHFGY 332
I++ +F+IE + HP + + F AS RA ++ HFG
Sbjct: 234 KEIIEKEGSFTIERLEIIKHPNGEVPWDESDSEDKVEDGRFVASSVRAVVEPMLVAHFGE 293
Query: 333 QFVDRIFNYYSTKLAENMSSICDGKTQDKIELFVLLRRN 371
+D++F+ Y+ KL+E++S + I + V L R
Sbjct: 294 DIMDKLFDRYAKKLSEHLSKE-LQNAKKTINVVVSLSRK 331
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This family of plant methyltransferases contains enzymes that act on a variety of substrates including salicylic acid, jasmonic acid and 7-Methylxanthine. Caffeine is synthesised through sequential three-step methylation of xanthine derivatives at positions 7-N, 3-N, and 1-N. The protein 7-methylxanthine methyltransferase (designated as CaMXMT) catalyzes the second step to produce theobromine. Length = 331 |
| >gnl|CDD|178273 PLN02668, PLN02668, indole-3-acetate carboxyl methyltransferase | Back alignment and domain information |
|---|
Score = 188 bits (478), Expect = 3e-56
Identities = 126/367 (34%), Positives = 182/367 (49%), Gaps = 48/367 (13%)
Query: 4 NTFVSNISPEA-YPMVGGDGPHSYAKNSIYQEAIVNGSKGMIAAGIRKTLDLKSLRLDTS 62
N VSN+ E M GG G SYA NS +A ++ M+ + +TLD L
Sbjct: 7 NVVVSNMKLEKLLCMKGGKGEGSYANNS---QAQALHARSMLHL-LEETLDNVHLNSSPE 62
Query: 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDF 122
F DLGCS+G NT + I++ + K + D P EF FF+D +NDF
Sbjct: 63 VPFTAVDLGCSSGSNTIHIIDVIVK--HMSKRYE--SAGLDPP---EFSAFFSDLPSNDF 115
Query: 123 NTLFKSVPL----------------SKKYFATGVPGSFHGRLFPESSLHVAHTSNALPWL 166
NTLF+ +P + YFA GVPGSF+ RLFP S+ V H++ +L WL
Sbjct: 116 NTLFQLLPPLANYGGSMEECLAASGHRSYFAAGVPGSFYRRLFPARSIDVFHSAFSLHWL 175
Query: 167 SKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLL 226
S++P+ +T+ S A+N+G + G + A AY QF+ D+ FL ARAQE+ GG + L
Sbjct: 176 SQVPESVTDKRSAAYNKGRVFIHGASESTANAYKRQFQADLAGFLRARAQEMKRGGAMFL 235
Query: 227 LT-------PTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFL 279
+ PT + G + GT+F DL GL+ EK DSFN+P+Y P L
Sbjct: 236 VCLGRTSVDPTDQGGAGLLF---GTHFQ---DAWDDLVQEGLVTSEKRDSFNIPVYAPSL 289
Query: 280 GELMGHIKRNKNFSIEIMNTFT--HPLV--HMVYSAEF---WASLSRAAFGGLVGQHFGY 332
+ ++ N +F+I+ + F PLV +AE A+ R+ G LV H G
Sbjct: 290 QDFKEVVEANGSFAIDKLEVFKGGSPLVVNEPDDAAEVGRAMANSCRSVAGVLVDAHIGE 349
Query: 333 QFVDRIF 339
+ + +F
Sbjct: 350 ELSNELF 356
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Length = 386 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 371 | |||
| PLN02668 | 386 | indole-3-acetate carboxyl methyltransferase | 100.0 | |
| PF03492 | 334 | Methyltransf_7: SAM dependent carboxyl methyltrans | 100.0 | |
| PRK14103 | 255 | trans-aconitate 2-methyltransferase; Provisional | 99.47 | |
| PRK01683 | 258 | trans-aconitate 2-methyltransferase; Provisional | 99.46 | |
| TIGR02072 | 240 | BioC biotin biosynthesis protein BioC. This enzyme | 99.3 | |
| PRK10258 | 251 | biotin biosynthesis protein BioC; Provisional | 99.18 | |
| COG4106 | 257 | Tam Trans-aconitate methyltransferase [General fun | 98.87 | |
| PLN02244 | 340 | tocopherol O-methyltransferase | 98.84 | |
| PTZ00098 | 263 | phosphoethanolamine N-methyltransferase; Provision | 98.83 | |
| PLN02233 | 261 | ubiquinone biosynthesis methyltransferase | 98.79 | |
| PF13489 | 161 | Methyltransf_23: Methyltransferase domain; PDB: 3J | 98.77 | |
| PLN02336 | 475 | phosphoethanolamine N-methyltransferase | 98.76 | |
| PRK15068 | 322 | tRNA mo(5)U34 methyltransferase; Provisional | 98.76 | |
| TIGR00740 | 239 | methyltransferase, putative. A simple BLAST search | 98.72 | |
| TIGR02752 | 231 | MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone me | 98.72 | |
| PRK08317 | 241 | hypothetical protein; Provisional | 98.7 | |
| TIGR00452 | 314 | methyltransferase, putative. Known examples to dat | 98.65 | |
| PRK11036 | 255 | putative S-adenosyl-L-methionine-dependent methylt | 98.63 | |
| PRK11207 | 197 | tellurite resistance protein TehB; Provisional | 98.6 | |
| PRK11705 | 383 | cyclopropane fatty acyl phospholipid synthase; Pro | 98.57 | |
| PRK06202 | 232 | hypothetical protein; Provisional | 98.49 | |
| PLN02396 | 322 | hexaprenyldihydroxybenzoate methyltransferase | 98.49 | |
| PRK15451 | 247 | tRNA cmo(5)U34 methyltransferase; Provisional | 98.48 | |
| TIGR00477 | 195 | tehB tellurite resistance protein TehB. Part of a | 98.48 | |
| PF08241 | 95 | Methyltransf_11: Methyltransferase domain; InterPr | 98.47 | |
| COG2226 | 238 | UbiE Methylase involved in ubiquinone/menaquinone | 98.43 | |
| PRK12335 | 287 | tellurite resistance protein TehB; Provisional | 98.42 | |
| smart00828 | 224 | PKS_MT Methyltransferase in polyketide synthase (P | 98.41 | |
| PF01209 | 233 | Ubie_methyltran: ubiE/COQ5 methyltransferase famil | 98.4 | |
| PRK00216 | 239 | ubiE ubiquinone/menaquinone biosynthesis methyltra | 98.39 | |
| TIGR01934 | 223 | MenG_MenH_UbiE ubiquinone/menaquinone biosynthesis | 98.33 | |
| PF02353 | 273 | CMAS: Mycolic acid cyclopropane synthetase; InterP | 98.31 | |
| PLN02490 | 340 | MPBQ/MSBQ methyltransferase | 98.31 | |
| PF03848 | 192 | TehB: Tellurite resistance protein TehB; InterPro: | 98.24 | |
| PF12847 | 112 | Methyltransf_18: Methyltransferase domain; PDB: 3G | 98.22 | |
| KOG2940 | 325 | consensus Predicted methyltransferase [General fun | 98.19 | |
| PRK11873 | 272 | arsM arsenite S-adenosylmethyltransferase; Reviewe | 98.17 | |
| PF08242 | 99 | Methyltransf_12: Methyltransferase domain; InterPr | 98.17 | |
| PF13847 | 152 | Methyltransf_31: Methyltransferase domain; PDB: 3T | 98.07 | |
| TIGR01983 | 224 | UbiG ubiquinone biosynthesis O-methyltransferase. | 98.02 | |
| TIGR02021 | 219 | BchM-ChlM magnesium protoporphyrin O-methyltransfe | 98.0 | |
| PRK00121 | 202 | trmB tRNA (guanine-N(7)-)-methyltransferase; Revie | 98.0 | |
| PRK11088 | 272 | rrmA 23S rRNA methyltransferase A; Provisional | 97.99 | |
| COG2230 | 283 | Cfa Cyclopropane fatty acid synthase and related m | 97.97 | |
| PRK06922 | 677 | hypothetical protein; Provisional | 97.96 | |
| smart00138 | 264 | MeTrc Methyltransferase, chemotaxis proteins. Meth | 97.96 | |
| TIGR02081 | 194 | metW methionine biosynthesis protein MetW. This pr | 97.92 | |
| TIGR02716 | 306 | C20_methyl_CrtF C-20 methyltransferase BchU. Membe | 97.89 | |
| PRK07580 | 230 | Mg-protoporphyrin IX methyl transferase; Validated | 97.88 | |
| KOG3010 | 261 | consensus Methyltransferase [General function pred | 97.84 | |
| PRK05134 | 233 | bifunctional 3-demethylubiquinone-9 3-methyltransf | 97.83 | |
| PRK11188 | 209 | rrmJ 23S rRNA methyltransferase J; Provisional | 97.82 | |
| TIGR00138 | 181 | gidB 16S rRNA methyltransferase GidB. GidB (glucos | 97.78 | |
| PF05401 | 201 | NodS: Nodulation protein S (NodS); InterPro: IPR00 | 97.75 | |
| KOG1270 | 282 | consensus Methyltransferases [Coenzyme transport a | 97.75 | |
| KOG1541 | 270 | consensus Predicted protein carboxyl methylase [Ge | 97.75 | |
| PLN02336 | 475 | phosphoethanolamine N-methyltransferase | 97.73 | |
| KOG2361 | 264 | consensus Predicted methyltransferase [General fun | 97.7 | |
| KOG1540 | 296 | consensus Ubiquinone biosynthesis methyltransferas | 97.68 | |
| PF08003 | 315 | Methyltransf_9: Protein of unknown function (DUF16 | 97.66 | |
| TIGR03438 | 301 | probable methyltransferase. This model represents | 97.62 | |
| PF13649 | 101 | Methyltransf_25: Methyltransferase domain; PDB: 3B | 97.62 | |
| PRK05785 | 226 | hypothetical protein; Provisional | 97.55 | |
| TIGR03840 | 213 | TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d | 97.52 | |
| TIGR00091 | 194 | tRNA (guanine-N(7)-)-methyltransferase. In E. coli | 97.52 | |
| PRK13255 | 218 | thiopurine S-methyltransferase; Reviewed | 97.52 | |
| TIGR03587 | 204 | Pse_Me-ase pseudaminic acid biosynthesis-associate | 97.49 | |
| PF00891 | 241 | Methyltransf_2: O-methyltransferase; InterPro: IPR | 97.47 | |
| PRK15001 | 378 | SAM-dependent 23S ribosomal RNA mG1835 methyltrans | 97.47 | |
| cd02440 | 107 | AdoMet_MTases S-adenosylmethionine-dependent methy | 97.41 | |
| PRK09489 | 342 | rsmC 16S ribosomal RNA m2G1207 methyltransferase; | 97.4 | |
| TIGR02469 | 124 | CbiT precorrin-6Y C5,15-methyltransferase (decarbo | 97.37 | |
| PRK08287 | 187 | cobalt-precorrin-6Y C(15)-methyltransferase; Valid | 97.35 | |
| PLN02585 | 315 | magnesium protoporphyrin IX methyltransferase | 97.33 | |
| COG4123 | 248 | Predicted O-methyltransferase [General function pr | 97.33 | |
| PRK00107 | 187 | gidB 16S rRNA methyltransferase GidB; Reviewed | 97.33 | |
| PF05148 | 219 | Methyltransf_8: Hypothetical methyltransferase; In | 97.32 | |
| PHA03411 | 279 | putative methyltransferase; Provisional | 97.3 | |
| PRK13942 | 212 | protein-L-isoaspartate O-methyltransferase; Provis | 97.29 | |
| PF05175 | 170 | MTS: Methyltransferase small domain; InterPro: IPR | 97.28 | |
| PLN02232 | 160 | ubiquinone biosynthesis methyltransferase | 97.26 | |
| PRK13944 | 205 | protein-L-isoaspartate O-methyltransferase; Provis | 97.22 | |
| PRK00312 | 212 | pcm protein-L-isoaspartate O-methyltransferase; Re | 97.16 | |
| TIGR00438 | 188 | rrmJ cell division protein FtsJ. | 97.14 | |
| TIGR00537 | 179 | hemK_rel_arch HemK-related putative methylase. The | 97.12 | |
| PF06080 | 204 | DUF938: Protein of unknown function (DUF938); Inte | 97.11 | |
| PRK14121 | 390 | tRNA (guanine-N(7)-)-methyltransferase; Provisiona | 97.11 | |
| TIGR00080 | 215 | pimt protein-L-isoaspartate(D-aspartate) O-methylt | 97.1 | |
| PF03291 | 331 | Pox_MCEL: mRNA capping enzyme; InterPro: IPR004971 | 97.08 | |
| PRK04266 | 226 | fibrillarin; Provisional | 96.98 | |
| PRK14967 | 223 | putative methyltransferase; Provisional | 96.95 | |
| TIGR03534 | 251 | RF_mod_PrmC protein-(glutamine-N5) methyltransfera | 96.94 | |
| PF13659 | 117 | Methyltransf_26: Methyltransferase domain; PDB: 3G | 96.92 | |
| PF07021 | 193 | MetW: Methionine biosynthesis protein MetW; InterP | 96.89 | |
| PTZ00146 | 293 | fibrillarin; Provisional | 96.89 | |
| TIGR03533 | 284 | L3_gln_methyl protein-(glutamine-N5) methyltransfe | 96.87 | |
| PF05891 | 218 | Methyltransf_PK: AdoMet dependent proline di-methy | 96.81 | |
| PF03141 | 506 | Methyltransf_29: Putative S-adenosyl-L-methionine- | 96.73 | |
| KOG3178 | 342 | consensus Hydroxyindole-O-methyltransferase and re | 96.64 | |
| COG2242 | 187 | CobL Precorrin-6B methylase 2 [Coenzyme metabolism | 96.54 | |
| COG2227 | 243 | UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4- | 96.5 | |
| KOG3045 | 325 | consensus Predicted RNA methylase involved in rRNA | 96.36 | |
| PRK11805 | 307 | N5-glutamine S-adenosyl-L-methionine-dependent met | 96.35 | |
| TIGR01177 | 329 | conserved hypothetical protein TIGR01177. This fam | 96.25 | |
| TIGR00536 | 284 | hemK_fam HemK family putative methylases. The gene | 96.23 | |
| PRK10901 | 427 | 16S rRNA methyltransferase B; Provisional | 96.21 | |
| PRK09328 | 275 | N5-glutamine S-adenosyl-L-methionine-dependent met | 96.21 | |
| TIGR00406 | 288 | prmA ribosomal protein L11 methyltransferase. Ribo | 96.19 | |
| PRK07402 | 196 | precorrin-6B methylase; Provisional | 96.14 | |
| COG2518 | 209 | Pcm Protein-L-isoaspartate carboxylmethyltransfera | 96.12 | |
| PRK00811 | 283 | spermidine synthase; Provisional | 96.04 | |
| PRK14904 | 445 | 16S rRNA methyltransferase B; Provisional | 96.0 | |
| PRK14968 | 188 | putative methyltransferase; Provisional | 95.99 | |
| PLN03075 | 296 | nicotianamine synthase; Provisional | 95.89 | |
| PRK14903 | 431 | 16S rRNA methyltransferase B; Provisional | 95.84 | |
| PRK14902 | 444 | 16S rRNA methyltransferase B; Provisional | 95.75 | |
| PF02390 | 195 | Methyltransf_4: Putative methyltransferase ; Inter | 95.73 | |
| PRK00517 | 250 | prmA ribosomal protein L11 methyltransferase; Revi | 95.6 | |
| PF01135 | 209 | PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl | 95.59 | |
| TIGR00563 | 426 | rsmB ribosomal RNA small subunit methyltransferase | 95.5 | |
| PRK14901 | 434 | 16S rRNA methyltransferase B; Provisional | 95.47 | |
| PRK01544 | 506 | bifunctional N5-glutamine S-adenosyl-L-methionine- | 95.3 | |
| TIGR03704 | 251 | PrmC_rel_meth putative protein-(glutamine-N5) meth | 95.23 | |
| PRK14966 | 423 | unknown domain/N5-glutamine S-adenosyl-L-methionin | 95.22 | |
| PRK03612 | 521 | spermidine synthase; Provisional | 95.21 | |
| PRK00377 | 198 | cbiT cobalt-precorrin-6Y C(15)-methyltransferase; | 95.2 | |
| KOG4300 | 252 | consensus Predicted methyltransferase [General fun | 94.92 | |
| TIGR00446 | 264 | nop2p NOL1/NOP2/sun family putative RNA methylase. | 94.55 | |
| COG2813 | 300 | RsmC 16S RNA G1207 methylase RsmC [Translation, ri | 94.51 | |
| PRK13943 | 322 | protein-L-isoaspartate O-methyltransferase; Provis | 94.42 | |
| TIGR00417 | 270 | speE spermidine synthase. the SpeE subunit of sper | 94.28 | |
| PRK04457 | 262 | spermidine synthase; Provisional | 94.18 | |
| KOG2904 | 328 | consensus Predicted methyltransferase [General fun | 94.17 | |
| PLN02366 | 308 | spermidine synthase | 94.16 | |
| PRK01544 | 506 | bifunctional N5-glutamine S-adenosyl-L-methionine- | 93.8 | |
| KOG1331 | 293 | consensus Predicted methyltransferase [General fun | 93.74 | |
| KOG1975 | 389 | consensus mRNA cap methyltransferase [RNA processi | 93.62 | |
| KOG2899 | 288 | consensus Predicted methyltransferase [General fun | 93.23 | |
| PRK10611 | 287 | chemotaxis methyltransferase CheR; Provisional | 93.17 | |
| PHA03412 | 241 | putative methyltransferase; Provisional | 92.64 | |
| PRK01581 | 374 | speE spermidine synthase; Validated | 92.56 | |
| smart00650 | 169 | rADc Ribosomal RNA adenine dimethylases. | 92.14 | |
| COG2890 | 280 | HemK Methylase of polypeptide chain release factor | 91.65 | |
| PF05724 | 218 | TPMT: Thiopurine S-methyltransferase (TPMT); Inter | 91.34 | |
| PF12147 | 311 | Methyltransf_20: Putative methyltransferase; Inter | 91.29 | |
| PF01234 | 256 | NNMT_PNMT_TEMT: NNMT/PNMT/TEMT family; InterPro: I | 91.02 | |
| PF01739 | 196 | CheR: CheR methyltransferase, SAM binding domain; | 90.95 | |
| COG0220 | 227 | Predicted S-adenosylmethionine-dependent methyltra | 89.98 | |
| PRK13256 | 226 | thiopurine S-methyltransferase; Reviewed | 89.59 | |
| PLN02672 | 1082 | methionine S-methyltransferase | 89.19 | |
| PF10294 | 173 | Methyltransf_16: Putative methyltransferase; Inter | 88.76 | |
| TIGR03439 | 319 | methyl_EasF probable methyltransferase domain, Eas | 88.36 | |
| KOG1499 | 346 | consensus Protein arginine N-methyltransferase PRM | 88.3 | |
| PRK00274 | 272 | ksgA 16S ribosomal RNA methyltransferase KsgA/Dim1 | 87.96 | |
| PF08123 | 205 | DOT1: Histone methylation protein DOT1 ; InterPro: | 87.37 | |
| PRK15128 | 396 | 23S rRNA m(5)C1962 methyltransferase; Provisional | 87.34 | |
| KOG1271 | 227 | consensus Methyltransferases [General function pre | 86.71 | |
| PLN02781 | 234 | Probable caffeoyl-CoA O-methyltransferase | 86.63 | |
| COG1352 | 268 | CheR Methylase of chemotaxis methyl-accepting prot | 86.54 | |
| PRK11783 | 702 | rlmL 23S rRNA m(2)G2445 methyltransferase; Provisi | 85.57 | |
| PRK13168 | 443 | rumA 23S rRNA m(5)U1939 methyltransferase; Reviewe | 84.29 | |
| PRK03522 | 315 | rumB 23S rRNA methyluridine methyltransferase; Rev | 82.47 | |
| PTZ00338 | 294 | dimethyladenosine transferase-like protein; Provis | 82.2 | |
| PF07942 | 270 | N2227: N2227-like protein; InterPro: IPR012901 Thi | 81.97 | |
| PRK11727 | 321 | 23S rRNA mA1618 methyltransferase; Provisional | 81.82 | |
| TIGR00755 | 253 | ksgA dimethyladenosine transferase. Alternate name | 80.72 | |
| PRK14896 | 258 | ksgA 16S ribosomal RNA methyltransferase KsgA/Dim1 | 80.23 |
| >PLN02668 indole-3-acetate carboxyl methyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-101 Score=764.10 Aligned_cols=353 Identities=32% Similarity=0.519 Sum_probs=319.1
Q ss_pred ccchhcc-ccceecccCCCCCCchHHhhHHHHHHHHHHHHHHHHHHHhhcccccccCCCCCceEEeeecCCCCcccHHHH
Q 017439 4 NTFVSNI-SPEAYPMVGGDGPHSYAKNSIYQEAIVNGSKGMIAAGIRKTLDLKSLRLDTSSTFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 4 ~~~~~~~-~~~~~~M~gG~g~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~IaDlGCs~G~Ns~~~~ 82 (371)
|.+++|| ++++|||+||+|++||++||.+|++++..++|+|++||+++.. ... +.++++|||||||+|+||+.++
T Consensus 7 ~~~~~~m~~~~~l~M~gG~g~~SYa~nS~~Q~~~~~~~k~~leeai~~~~~-~~~---p~~~~~iaDlGcs~G~ntl~~v 82 (386)
T PLN02668 7 NVVVSNMKLEKLLCMKGGKGEGSYANNSQAQALHARSMLHLLEETLDNVHL-NSS---PEVPFTAVDLGCSSGSNTIHII 82 (386)
T ss_pred ccceecceeccccccCCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccC---CCcceeEEEecCCCCccHHHHH
Confidence 4578999 9999999999999999999999999999999999999988531 211 2368999999999999999999
Q ss_pred HHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCC----------------cceeeeccCCCccc
Q 017439 83 QNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLS----------------KKYFATGVPGSFHG 146 (371)
Q Consensus 83 ~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~----------------~~~f~~gvpgSFy~ 146 (371)
+.||++|++ +|++.+ .+ .| ||||||||||+||||+||++||+. ++||++|||||||+
T Consensus 83 s~iI~~i~~-~~~~~~-~~--~p---e~qv~~nDLP~NDFNtlF~~L~~~~~~~~~~~~~~~~~~~~~~f~~gvpGSFY~ 155 (386)
T PLN02668 83 DVIVKHMSK-RYESAG-LD--PP---EFSAFFSDLPSNDFNTLFQLLPPLANYGGSMEECLAASGHRSYFAAGVPGSFYR 155 (386)
T ss_pred HHHHHHHHH-HhhhcC-CC--CC---cceEEecCCCCCCHHHHHhhchhhhhhhcchhhhccccCCCceEEEecCccccc
Confidence 999999999 988643 33 67 999999999999999999999752 24999999999999
Q ss_pred ccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEE
Q 017439 147 RLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLL 226 (371)
Q Consensus 147 rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl 226 (371)
||||++|+||+||++|||||||+|+++.|+.+++||||+||+++++|+|++||++||++||..||++||+||+|||+||+
T Consensus 156 RLfP~~Slh~~~Ss~slHWLS~vP~~l~d~~s~~~Nkg~iyi~~~s~~v~~aY~~Qf~~D~~~FL~~Ra~ELvpGG~mvl 235 (386)
T PLN02668 156 RLFPARSIDVFHSAFSLHWLSQVPESVTDKRSAAYNKGRVFIHGASESTANAYKRQFQADLAGFLRARAQEMKRGGAMFL 235 (386)
T ss_pred cccCCCceEEEEeeccceecccCchhhccCCcccccCCceEecCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCcEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCcCCCCCCCCCCCcchHHH-HHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEeecCcc
Q 017439 227 LTPTIRDGIPMFSTPEGTNFDY-LGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFTHPLV 305 (371)
Q Consensus 227 ~~~gr~~~~~~~~~~~~~~~~~-l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~~~p~~ 305 (371)
+++||++.++..+...+.+|+. +.++|+|||.||+|++||+|+||+|+|+||++|++++|+++|+|+|+++|.++..|+
T Consensus 236 ~~~Gr~~~~~~~~~~~~~~~~~~l~~al~dlv~eGlI~eek~dsFniP~Y~ps~eEv~~~Ie~~gsF~I~~le~~~~~~~ 315 (386)
T PLN02668 236 VCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVQEGLVTSEKRDSFNIPVYAPSLQDFKEVVEANGSFAIDKLEVFKGGSP 315 (386)
T ss_pred EEecCCCCCcccCCchhHHHHHHHHHHHHHHHHcCCCCHHHHhcccCcccCCCHHHHHHHHhhcCCEEeeeeEEeeccCc
Confidence 9999988766555435567877 999999999999999999999999999999999999999999999999999976554
Q ss_pred c---cc----ccHHHHHHhHHHhhhhhhhhhhcHHHHHHHHHHHHHHHHHhhhhhccCCCCCeEEEEEEEE
Q 017439 306 H---MV----YSAEFWASLSRAAFGGLVGQHFGYQFVDRIFNYYSTKLAENMSSICDGKTQDKIELFVLLR 369 (371)
Q Consensus 306 ~---~~----~~~~~~a~~iRa~~~~~l~~h~ge~i~delf~r~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 369 (371)
. .+ ..+..+++++||++||++.+|||++|+|+||+||++++++++++. .++.+.+.++++|.
T Consensus 316 ~~~~~~~d~~~~g~~~a~~~RA~~E~ll~~HFG~~i~D~lF~r~~~~v~~~~~~~--~~~~~~~~~~~sL~ 384 (386)
T PLN02668 316 LVVNEPDDAAEVGRAMANSCRSVAGVLVDAHIGEELSNELFLRVERRATSHAKEL--LEKLQFFHIVASLS 384 (386)
T ss_pred ccccCcccHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhh--cccCceEEEEEEEe
Confidence 2 11 235679999999999999999999999999999999999999874 35677888888885
|
|
| >PF03492 Methyltransf_7: SAM dependent carboxyl methyltransferase; InterPro: IPR005299 This family of plant methyltransferases contains enzymes that act on a variety of substrates including salicylic acid, jasmonic acid and 7-Methylxanthine | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-93 Score=700.02 Aligned_cols=316 Identities=43% Similarity=0.730 Sum_probs=262.2
Q ss_pred HHHHHHhhcccccccCCCCCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchh
Q 017439 44 IAAGIRKTLDLKSLRLDTSSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFN 123 (371)
Q Consensus 44 l~~ai~~~~~~~~~~~~~~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn 123 (371)
+++||++++.... .+++++|||||||+|+||+.+++.||++|++ +|+..+..+ .| +|||||||||+||||
T Consensus 1 ~~~ai~~~~~~~~----~~~~~~iaD~GcS~G~Nsl~~~~~ii~~i~~-~~~~~~~~~--~~---e~~v~~nDlP~NDFn 70 (334)
T PF03492_consen 1 LEEAIKELYNSSN----NPKPFRIADLGCSSGPNSLLAVSNIIDAIRE-RCRSSNNQP--PP---EFQVFFNDLPSNDFN 70 (334)
T ss_dssp -HHHHHHHHHSTT----TTTEEEEEEES--SSHHHHHHHHHHHHHHHH-HHHCTT-SS-------EEEEEEEE-TTS-HH
T ss_pred ChHHHHHHHhcCC----CCCceEEEecCCCCCccHHHHHHHHHHHHHH-HhhhhcCCC--CC---eEEEEeCCCCCccHH
Confidence 4788888664232 6789999999999999999999999999999 987643223 67 999999999999999
Q ss_pred hhhhcCCCC-------cceeeeccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeec-CCCHHH
Q 017439 124 TLFKSVPLS-------KKYFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCS-GFEKEV 195 (371)
Q Consensus 124 ~lF~~l~~~-------~~~f~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~-~~~~~~ 195 (371)
+||++||+. ++||++|||||||+||||++|+||+||++||||||++|+++.+..+++||||+||++ +++++|
T Consensus 71 ~lF~~l~~~~~~~~~~~~~f~~gvpgSFy~rLfP~~Svh~~~Ss~alHWLS~vP~~l~~~~~~~~Nkg~i~~~~~~~~~v 150 (334)
T PF03492_consen 71 TLFKSLPSFQQSLKKFRNYFVSGVPGSFYGRLFPSNSVHFGHSSYALHWLSQVPEELVDKSSPAWNKGNIYISRTSPPEV 150 (334)
T ss_dssp HHHHCHHHHHHHHHHTTSEEEEEEES-TTS--S-TT-EEEEEEES-TTB-SSS-CCCCTTTSTTTSTTTSSSSTTS-HHH
T ss_pred HHHHhChhhhhccCCCceEEEEecCchhhhccCCCCceEEEEEechhhhcccCCcccccccccccccCcEEEecCCCHHH
Confidence 999999875 799999999999999999999999999999999999999999999999999999998 678899
Q ss_pred HHHHHHHHHhhHHHHHHHHHhhcccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccc
Q 017439 196 AEAYSAQFKNDIESFLNARAQELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMY 275 (371)
Q Consensus 196 ~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y 275 (371)
.+||++||++||.+||++||+||+|||+|||+++||++.++.. .+.+.+|++|+++|+|||.||+|++|++|+||+|+|
T Consensus 151 ~~ay~~Qf~~D~~~FL~~Ra~ELv~GG~mvl~~~gr~~~~~~~-~~~~~~~~~l~~~l~dMv~eGlI~~ek~dsfniP~Y 229 (334)
T PF03492_consen 151 AKAYAKQFQKDFSSFLKARAEELVPGGRMVLTFLGRDEEDPSS-TGSCMLWDLLADALRDMVAEGLISEEKVDSFNIPIY 229 (334)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEE-STSSTTS-TTCCCHHHHHHHHHHHHHHTTSS-HCCCCTG--SBB
T ss_pred HHHHHHHHHHHHHHHHHHhhheeccCcEEEEEEeecccccccc-CCcchHHHHHHHHHHHHHHcCCcCHHHhhceeCCcc
Confidence 9999999999999999999999999999999999999865533 345679999999999999999999999999999999
Q ss_pred cCCHHHHHHHhhcCCceEEEEEEEeecCcccc----------cccHHHHHHhHHHhhhhhhhhhhcHHHHHHHHHHHHHH
Q 017439 276 YPFLGELMGHIKRNKNFSIEIMNTFTHPLVHM----------VYSAEFWASLSRAAFGGLVGQHFGYQFVDRIFNYYSTK 345 (371)
Q Consensus 276 ~ps~eE~~~~i~~~g~F~I~~~e~~~~p~~~~----------~~~~~~~a~~iRa~~~~~l~~h~ge~i~delf~r~~~~ 345 (371)
+||.+|++++|+++|+|+|+++|.+..+++.. ..+++.+++++||++||++++|||++|+|+||+||+++
T Consensus 230 ~ps~eEv~~~I~~~gsF~I~~le~~~~~~~~~~~~~~~~~d~~~~~~~~~~~iRA~~e~~l~~hfG~ei~D~LF~r~~~~ 309 (334)
T PF03492_consen 230 FPSPEEVRAIIEEEGSFEIEKLELFEQPWWSVPDDESWKEDAKEYARNVANYIRAVFEPLLKAHFGEEIMDELFERYAKK 309 (334)
T ss_dssp ---HHHHHHHHHHHTSEEEEEEEEEEEETCCTCTTT-STTTHHCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHhcCCCEEEEEEEEEeecccccchhhhcccchhhhHHHHHHhHHHHHHHHHHHHhChHHHHHHHHHHHHH
Confidence 99999999999999999999999996433221 23688999999999999999999999999999999999
Q ss_pred HHHhhhhhccCCCCCeEEEEEEEEeC
Q 017439 346 LAENMSSICDGKTQDKIELFVLLRRN 371 (371)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~L~r~ 371 (371)
+++++++. +.+.++.++++++|+||
T Consensus 310 v~~~~~~~-~~~~~~~~~i~~~L~Rk 334 (334)
T PF03492_consen 310 VAEHLEKE-KSRNMKFVNIVVSLTRK 334 (334)
T ss_dssp HHHHHHHT-HTT-BEEEEEEEEEEE-
T ss_pred HHHHHHHh-hccCCCcEEEEEEEeeC
Confidence 99999875 33557899999999998
|
Caffeine is synthesized through sequential three-step methylation of xanthine derivatives at positions 7-N, 3-N, and 1-N. The protein 7-methylxanthine methyltransferase (designated as CaMXMT) catalyses the second step to produce theobromine [].; GO: 0008168 methyltransferase activity; PDB: 2EFJ_A 1M6E_X 2EG5_C 3B5I_B. |
| >PRK14103 trans-aconitate 2-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=3.8e-12 Score=120.82 Aligned_cols=224 Identities=16% Similarity=0.136 Sum_probs=138.0
Q ss_pred CchHHhhHHHHHHHHHHHHHHHHHHHhhcccccccCCCCCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCC
Q 017439 24 HSYAKNSIYQEAIVNGSKGMIAAGIRKTLDLKSLRLDTSSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHD 103 (371)
Q Consensus 24 ~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~ 103 (371)
..|.+++..|.+....+++. + . .....+|+|+|||+|..+..+. + ++
T Consensus 5 ~~y~~~~~~~~~~~~~ll~~--------l--~-----~~~~~~vLDlGcG~G~~~~~l~--------~-~~--------- 51 (255)
T PRK14103 5 DVYLAFADHRGRPFYDLLAR--------V--G-----AERARRVVDLGCGPGNLTRYLA--------R-RW--------- 51 (255)
T ss_pred HHHHHHHhHhhCHHHHHHHh--------C--C-----CCCCCEEEEEcCCCCHHHHHHH--------H-HC---------
Confidence 45999999998766532222 2 1 2345799999999998876554 3 21
Q ss_pred CCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCC
Q 017439 104 NPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNR 183 (371)
Q Consensus 104 ~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nk 183 (371)
| ..+|+..|+-.+- -...+. ..--|..+. ...+.|++++|+++|+.++||+...+
T Consensus 52 -p---~~~v~gvD~s~~~-~~~a~~---~~~~~~~~d----~~~~~~~~~fD~v~~~~~l~~~~d~~------------- 106 (255)
T PRK14103 52 -P---GAVIEALDSSPEM-VAAARE---RGVDARTGD----VRDWKPKPDTDVVVSNAALQWVPEHA------------- 106 (255)
T ss_pred -C---CCEEEEEECCHHH-HHHHHh---cCCcEEEcC----hhhCCCCCCceEEEEehhhhhCCCHH-------------
Confidence 2 2357777764322 222221 112244443 34566788999999999999964311
Q ss_pred CceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCc
Q 017439 184 GHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIA 263 (371)
Q Consensus 184 g~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~ 263 (371)
.+|+.-++-|+|||++++++.+..+. + .+.. +..+..++-..
T Consensus 107 -------------------------~~l~~~~~~LkpgG~l~~~~~~~~~~-~--------~~~~----~~~~~~~~~w~ 148 (255)
T PRK14103 107 -------------------------DLLVRWVDELAPGSWIAVQVPGNFDA-P--------SHAA----VRALARREPWA 148 (255)
T ss_pred -------------------------HHHHHHHHhCCCCcEEEEEcCCCcCC-h--------hHHH----HHHHhccCchh
Confidence 24566667899999999987653211 1 1122 22222211111
Q ss_pred hhhhc--ccCcccccCCHHHHHHHhhcCCceEEEEEEEe-ecCcccccccHHHHHHhHHH-hhhhhhhhhhcHHHHHHHH
Q 017439 264 EEKVD--SFNVPMYYPFLGELMGHIKRNKNFSIEIMNTF-THPLVHMVYSAEFWASLSRA-AFGGLVGQHFGYQFVDRIF 339 (371)
Q Consensus 264 ~e~~d--~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~-~~p~~~~~~~~~~~a~~iRa-~~~~~l~~h~ge~i~delf 339 (371)
. .+. .+..+....+.+++.+++++.| |++...+.. ..+ ....+.+..|+++ .+.+++. .++++..+++-
T Consensus 149 ~-~~~~~~~~~~~~~~~~~~~~~~l~~aG-f~v~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~ 221 (255)
T PRK14103 149 K-LLRDIPFRVGAVVQTPAGYAELLTDAG-CKVDAWETTYVHQ----LTGEDPVLDWITGTALRPVRE-RLSDDSWEQFR 221 (255)
T ss_pred H-HhcccccccCcCCCCHHHHHHHHHhCC-CeEEEEeeeeeee----CCCchhhhhhhhccchhhhhh-hCCHHHHHHHH
Confidence 0 011 1233456789999999999988 987665543 122 1234567788886 3566664 78888889999
Q ss_pred HHHHHHHHHhh
Q 017439 340 NYYSTKLAENM 350 (371)
Q Consensus 340 ~r~~~~~~~~~ 350 (371)
+.+.+.+.+.+
T Consensus 222 ~~~~~~l~~~~ 232 (255)
T PRK14103 222 AELIPLLREAY 232 (255)
T ss_pred HHHHHHHHHHC
Confidence 99999988775
|
|
| >PRK01683 trans-aconitate 2-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=8.1e-12 Score=118.36 Aligned_cols=246 Identities=18% Similarity=0.233 Sum_probs=147.5
Q ss_pred CchHHhhHHHHHHHHHHHHHHHHHHHhhcccccccCCCCCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCC
Q 017439 24 HSYAKNSIYQEAIVNGSKGMIAAGIRKTLDLKSLRLDTSSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHD 103 (371)
Q Consensus 24 ~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~ 103 (371)
..|.+++..|.+.....+.. +. .....+|+|+|||+|..+..+. + ++
T Consensus 7 ~~Y~~~~~~~~~~~~~ll~~--------~~-------~~~~~~vLDiGcG~G~~~~~la--------~-~~--------- 53 (258)
T PRK01683 7 SLYLKFEDERTRPARDLLAR--------VP-------LENPRYVVDLGCGPGNSTELLV--------E-RW--------- 53 (258)
T ss_pred HHHHHHHHHhhcHHHHHHhh--------CC-------CcCCCEEEEEcccCCHHHHHHH--------H-HC---------
Confidence 35999998887665432221 21 2345799999999999987666 2 21
Q ss_pred CCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCC
Q 017439 104 NPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNR 183 (371)
Q Consensus 104 ~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nk 183 (371)
| .-+|+..|+...-....=+.++ +--|..+.. ..+.|++++|+++|+.++||+.+.
T Consensus 54 -~---~~~v~gvD~s~~~i~~a~~~~~--~~~~~~~d~----~~~~~~~~fD~v~~~~~l~~~~d~-------------- 109 (258)
T PRK01683 54 -P---AARITGIDSSPAMLAEARSRLP--DCQFVEADI----ASWQPPQALDLIFANASLQWLPDH-------------- 109 (258)
T ss_pred -C---CCEEEEEECCHHHHHHHHHhCC--CCeEEECch----hccCCCCCccEEEEccChhhCCCH--------------
Confidence 1 2367788876543222211221 122444442 345677899999999999996431
Q ss_pred CceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCc
Q 017439 184 GHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIA 263 (371)
Q Consensus 184 g~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~ 263 (371)
..+|+.-.+-|+|||.+++++++.... + .+.. ++++.....-.
T Consensus 110 ------------------------~~~l~~~~~~LkpgG~~~~~~~~~~~~-~--------~~~~----~~~~~~~~~w~ 152 (258)
T PRK01683 110 ------------------------LELFPRLVSLLAPGGVLAVQMPDNLDE-P--------SHVL----MREVAENGPWE 152 (258)
T ss_pred ------------------------HHHHHHHHHhcCCCcEEEEECCCCCCC-H--------HHHH----HHHHHccCchH
Confidence 125777778999999999986442211 1 1111 22222211110
Q ss_pred hhhhc-ccCcccccCCHHHHHHHhhcCCceEEEEEEEe-ecCcccccccHHHHHHhHHH-hhhhhhhhhhcHHHHHHHHH
Q 017439 264 EEKVD-SFNVPMYYPFLGELMGHIKRNKNFSIEIMNTF-THPLVHMVYSAEFWASLSRA-AFGGLVGQHFGYQFVDRIFN 340 (371)
Q Consensus 264 ~e~~d-~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~-~~p~~~~~~~~~~~a~~iRa-~~~~~l~~h~ge~i~delf~ 340 (371)
..+. .-..+.+.++.+++...+.+.| +.++..+.. ..+. .+++.+..|+++ .+.+++ ++++++..+++.+
T Consensus 153 -~~~~~~~~~~~~~~~~~~~~~~l~~~g-~~v~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~f~~ 225 (258)
T PRK01683 153 -QNLPDRGARRAPLPPPHAYYDALAPAA-CRVDIWHTTYYHPM----PSAQAIVEWVKGTGLRPFL-DPLTESEQAAFLA 225 (258)
T ss_pred -HHhccccccCcCCCCHHHHHHHHHhCC-Cceeeeeeeeeeec----CCchhhhhhhhhccHHHHH-hhCCHHHHHHHHH
Confidence 1111 1112446789999999999988 556444432 2222 356778889887 556776 6899999999999
Q ss_pred HHHHHHHHhhh-hhccC-CCCCeEEEEEEEEeC
Q 017439 341 YYSTKLAENMS-SICDG-KTQDKIELFVLLRRN 371 (371)
Q Consensus 341 r~~~~~~~~~~-~~~~~-~~~~~~~~~~~L~r~ 371 (371)
.|.+.+.+... .- +. -...+..++++-+|+
T Consensus 226 ~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~ 257 (258)
T PRK01683 226 AYLARIAEAYPLQA-DGKVLLAFPRLFIVARRK 257 (258)
T ss_pred HHHHHHHHHCCCCC-CCcEEcccceEEEEEEec
Confidence 99999987743 11 11 113445566666653
|
|
| >TIGR02072 BioC biotin biosynthesis protein BioC | Back alignment and domain information |
|---|
Probab=99.30 E-value=8.2e-11 Score=108.71 Aligned_cols=217 Identities=18% Similarity=0.197 Sum_probs=138.0
Q ss_pred CCchHHhhHHHHHHHHHHHHHHHHHHHhhcccccccCCCCCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCC
Q 017439 23 PHSYAKNSIYQEAIVNGSKGMIAAGIRKTLDLKSLRLDTSSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEH 102 (371)
Q Consensus 23 ~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~ 102 (371)
..+|.+.+..|+.+.....+.+... . ..++.+|+|+|||+|..+..+. + .
T Consensus 6 ~~~y~~~~~~q~~~~~~l~~~~~~~-------~-----~~~~~~vLDlG~G~G~~~~~l~--------~-~--------- 55 (240)
T TIGR02072 6 AKTYDRHAKIQREMAKRLLALLKEK-------G-----IFIPASVLDIGCGTGYLTRALL--------K-R--------- 55 (240)
T ss_pred hhchhHHHHHHHHHHHHHHHHhhhh-------c-----cCCCCeEEEECCCccHHHHHHH--------H-h---------
Confidence 3569999999998777665554311 0 1345789999999999877665 2 1
Q ss_pred CCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcC
Q 017439 103 DNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWN 182 (371)
Q Consensus 103 ~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~n 182 (371)
.| ..+++..|...+..+..-..+++ +-.|+.+ ++-...+|++++|+++++.++||+..
T Consensus 56 -~~---~~~~~~~D~~~~~~~~~~~~~~~-~~~~~~~---d~~~~~~~~~~fD~vi~~~~l~~~~~-------------- 113 (240)
T TIGR02072 56 -FP---QAEFIALDISAGMLAQAKTKLSE-NVQFICG---DAEKLPLEDSSFDLIVSNLALQWCDD-------------- 113 (240)
T ss_pred -CC---CCcEEEEeChHHHHHHHHHhcCC-CCeEEec---chhhCCCCCCceeEEEEhhhhhhccC--------------
Confidence 12 33678888776665555444442 2233333 34455578999999999999999643
Q ss_pred CCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCC
Q 017439 183 RGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLI 262 (371)
Q Consensus 183 kg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli 262 (371)
...+|+...+-|+|||.+++..++.+. +..+..++..
T Consensus 114 ------------------------~~~~l~~~~~~L~~~G~l~~~~~~~~~------------~~~~~~~~~~------- 150 (240)
T TIGR02072 114 ------------------------LSQALSELARVLKPGGLLAFSTFGPGT------------LHELRQSFGQ------- 150 (240)
T ss_pred ------------------------HHHHHHHHHHHcCCCcEEEEEeCCccC------------HHHHHHHHHH-------
Confidence 123688888999999999998765432 1222222221
Q ss_pred chhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEeecCcccccccHHHHHHhHHHhhh-hhhhhhhcHHHHHHHHHH
Q 017439 263 AEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFTHPLVHMVYSAEFWASLSRAAFG-GLVGQHFGYQFVDRIFNY 341 (371)
Q Consensus 263 ~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~~~p~~~~~~~~~~~a~~iRa~~~-~~l~~h~ge~i~delf~r 341 (371)
....+++.+++.+++.+. |+...++....+.. ..+...+..++|..-. ......++.+...++.+.
T Consensus 151 ---------~~~~~~~~~~~~~~l~~~--f~~~~~~~~~~~~~--~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 217 (240)
T TIGR02072 151 ---------HGLRYLSLDELKALLKNS--FELLTLEEELITLS--FDDPLDVLRHLKKTGANGLSSGRTSRKQLKAFLER 217 (240)
T ss_pred ---------hccCCCCHHHHHHHHHHh--cCCcEEEEEEEEEe--CCCHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHH
Confidence 112367899999999873 87666554322221 2356778888877333 332334677777777777
Q ss_pred HHHHHH
Q 017439 342 YSTKLA 347 (371)
Q Consensus 342 ~~~~~~ 347 (371)
|.+...
T Consensus 218 ~~~~~~ 223 (240)
T TIGR02072 218 YEQEFQ 223 (240)
T ss_pred HHHhhc
Confidence 766663
|
This enzyme, which is found in biotin biosynthetic gene clusters in proteobacteria, firmicutes, green-sulfur bacteria, fusobacterium and bacteroides, is believed to carry out an enzymatic step prior to the formation of pimeloyl-CoA (although attribution of this annotation is not traceable). The enzyme appears related to methyltransferases by homology. |
| >PRK10258 biotin biosynthesis protein BioC; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=7e-10 Score=104.77 Aligned_cols=208 Identities=12% Similarity=0.068 Sum_probs=123.0
Q ss_pred CchHHhhHHHHHHHHHHHHHHHHHHHhhcccccccCCCCCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCC
Q 017439 24 HSYAKNSIYQEAIVNGSKGMIAAGIRKTLDLKSLRLDTSSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHD 103 (371)
Q Consensus 24 ~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~ 103 (371)
.+|.+++..|+.+...+...+ . ....-+|+|+|||+|.+|..+. + +
T Consensus 18 ~~Y~~~~~~q~~~a~~l~~~l--------~-------~~~~~~vLDiGcG~G~~~~~l~--------~-~---------- 63 (251)
T PRK10258 18 AHYEQHAELQRQSADALLAML--------P-------QRKFTHVLDAGCGPGWMSRYWR--------E-R---------- 63 (251)
T ss_pred HhHhHHHHHHHHHHHHHHHhc--------C-------ccCCCeEEEeeCCCCHHHHHHH--------H-c----------
Confidence 358888888887766544332 1 1234689999999998776543 2 1
Q ss_pred CCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCC
Q 017439 104 NPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNR 183 (371)
Q Consensus 104 ~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nk 183 (371)
..+++..|+-..--...=+..+ ...|+.+. +-.--+|++++|+++|+.++||+...+
T Consensus 64 -----~~~v~~~D~s~~~l~~a~~~~~--~~~~~~~d---~~~~~~~~~~fD~V~s~~~l~~~~d~~------------- 120 (251)
T PRK10258 64 -----GSQVTALDLSPPMLAQARQKDA--ADHYLAGD---IESLPLATATFDLAWSNLAVQWCGNLS------------- 120 (251)
T ss_pred -----CCeEEEEECCHHHHHHHHhhCC--CCCEEEcC---cccCcCCCCcEEEEEECchhhhcCCHH-------------
Confidence 1156777764432211111111 12344443 222236888999999999999954422
Q ss_pred CceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCc
Q 017439 184 GHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIA 263 (371)
Q Consensus 184 g~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~ 263 (371)
.+|+.-.+-|+|||.++++.++.++- .-+.++|..+-..
T Consensus 121 -------------------------~~l~~~~~~Lk~gG~l~~~~~~~~~~------------~el~~~~~~~~~~---- 159 (251)
T PRK10258 121 -------------------------TALRELYRVVRPGGVVAFTTLVQGSL------------PELHQAWQAVDER---- 159 (251)
T ss_pred -------------------------HHHHHHHHHcCCCeEEEEEeCCCCch------------HHHHHHHHHhccC----
Confidence 25666778999999999999876532 3345555532111
Q ss_pred hhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEeecCcccccccHHHHHHhHHHhhhhhh-----hhhhcHHHHHHH
Q 017439 264 EEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFTHPLVHMVYSAEFWASLSRAAFGGLV-----GQHFGYQFVDRI 338 (371)
Q Consensus 264 ~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~~~p~~~~~~~~~~~a~~iRa~~~~~l-----~~h~ge~i~del 338 (371)
....-+++.+|+.+.+...+ +++ ..+.+... ..++..+...+|..-.... ...++...+.++
T Consensus 160 -------~~~~~~~~~~~l~~~l~~~~-~~~-~~~~~~~~----f~~~~~~l~~lk~~G~~~~~~~~~~~~~~~~~~~~~ 226 (251)
T PRK10258 160 -------PHANRFLPPDAIEQALNGWR-YQH-HIQPITLW----FDDALSAMRSLKGIGATHLHEGRDPRILTRSQLQRL 226 (251)
T ss_pred -------CccccCCCHHHHHHHHHhCC-cee-eeeEEEEE----CCCHHHHHHHHHHhCCCCCCCCCCCCCCcHHHHHHH
Confidence 11223678999999998654 543 33333332 2467778888887433222 123556555555
Q ss_pred HHHH
Q 017439 339 FNYY 342 (371)
Q Consensus 339 f~r~ 342 (371)
.+.|
T Consensus 227 ~~~~ 230 (251)
T PRK10258 227 QLAW 230 (251)
T ss_pred HHhc
Confidence 5554
|
|
| >COG4106 Tam Trans-aconitate methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.87 E-value=8.4e-08 Score=88.67 Aligned_cols=206 Identities=18% Similarity=0.250 Sum_probs=127.8
Q ss_pred CCCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeecc
Q 017439 61 TSSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGV 140 (371)
Q Consensus 61 ~~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gv 140 (371)
...+-+|.|||||.|.-|-++. + ++.. -++.--|-..-.-..--..+|. --|.-|.
T Consensus 28 ~~~~~~v~DLGCGpGnsTelL~--------~-RwP~-------------A~i~GiDsS~~Mla~Aa~rlp~--~~f~~aD 83 (257)
T COG4106 28 LERPRRVVDLGCGPGNSTELLA--------R-RWPD-------------AVITGIDSSPAMLAKAAQRLPD--ATFEEAD 83 (257)
T ss_pred ccccceeeecCCCCCHHHHHHH--------H-hCCC-------------CeEeeccCCHHHHHHHHHhCCC--Cceeccc
Confidence 4567999999999999998887 4 4421 1344444333222222222221 1233343
Q ss_pred CCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc
Q 017439 141 PGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP 220 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 220 (371)
....-|+...|++||+++||||..-|. .|..-=.+|.|
T Consensus 84 ----l~~w~p~~~~dllfaNAvlqWlpdH~~--------------------------------------ll~rL~~~L~P 121 (257)
T COG4106 84 ----LRTWKPEQPTDLLFANAVLQWLPDHPE--------------------------------------LLPRLVSQLAP 121 (257)
T ss_pred ----HhhcCCCCccchhhhhhhhhhccccHH--------------------------------------HHHHHHHhhCC
Confidence 456679999999999999999555443 23333468999
Q ss_pred CceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCc-ccccCCHHHHHHHhhcCCceEEEEEEE
Q 017439 221 GGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNV-PMYYPFLGELMGHIKRNKNFSIEIMNT 299 (371)
Q Consensus 221 GG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~-P~Y~ps~eE~~~~i~~~g~F~I~~~e~ 299 (371)
||.|.+.|++--++ . .+.++ ++.++++- -+.++..+.. ----+|+.-|-+++...+ =+|.--++
T Consensus 122 gg~LAVQmPdN~de--p-------sH~~m----r~~A~~~p-~~~~l~~~~~~r~~v~s~a~Yy~lLa~~~-~rvDiW~T 186 (257)
T COG4106 122 GGVLAVQMPDNLDE--P-------SHRLM----RETADEAP-FAQELGGRGLTRAPLPSPAAYYELLAPLA-CRVDIWHT 186 (257)
T ss_pred CceEEEECCCccCc--h-------hHHHH----HHHHhcCc-hhhhhCccccccCCCCCHHHHHHHhCccc-ceeeeeee
Confidence 99999999875432 1 12332 23333221 1122222111 111467888888887754 45544444
Q ss_pred e-ecCcccccccHHHHHHhHHH-hhhhhhhhhhcHHHHHHHHHHHHHHHHHhhhh
Q 017439 300 F-THPLVHMVYSAEFWASLSRA-AFGGLVGQHFGYQFVDRIFNYYSTKLAENMSS 352 (371)
Q Consensus 300 ~-~~p~~~~~~~~~~~a~~iRa-~~~~~l~~h~ge~i~delf~r~~~~~~~~~~~ 352 (371)
. .++. .+.+.+..|+++ ++.|.+. .++++--..|.++|..++.+++-.
T Consensus 187 ~Y~h~l----~~a~aIvdWvkgTgLrP~L~-~L~e~~~~~FL~~Y~~~l~~aYP~ 236 (257)
T COG4106 187 TYYHQL----PGADAIVDWVKGTGLRPYLD-RLDEEERQRFLDRYLALLAEAYPP 236 (257)
T ss_pred eccccC----CCccchhhheeccccceecc-ccCHHHHHHHHHHHHHHHHHhCCC
Confidence 3 3443 356789999997 8888885 688888899999999999776653
|
|
| >PLN02244 tocopherol O-methyltransferase | Back alignment and domain information |
|---|
Probab=98.84 E-value=2.4e-07 Score=92.01 Aligned_cols=159 Identities=16% Similarity=0.158 Sum_probs=89.1
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhh---hhhcCCC-Ccceee
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNT---LFKSVPL-SKKYFA 137 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~---lF~~l~~-~~~~f~ 137 (371)
...-+|+|+|||+|.++..+.. ++. .+|+--|+-.+.-.. ..+.-.. .+-.|.
T Consensus 117 ~~~~~VLDiGCG~G~~~~~La~---------~~g--------------~~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~ 173 (340)
T PLN02244 117 KRPKRIVDVGCGIGGSSRYLAR---------KYG--------------ANVKGITLSPVQAARANALAAAQGLSDKVSFQ 173 (340)
T ss_pred CCCCeEEEecCCCCHHHHHHHH---------hcC--------------CEEEEEECCHHHHHHHHHHHHhcCCCCceEEE
Confidence 3457899999999999987762 110 134444443332111 1111010 112343
Q ss_pred eccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 138 TGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 138 ~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
.+. ..+--||++++|+++|..++|++.+. ..+|+.-.+-
T Consensus 174 ~~D---~~~~~~~~~~FD~V~s~~~~~h~~d~--------------------------------------~~~l~e~~rv 212 (340)
T PLN02244 174 VAD---ALNQPFEDGQFDLVWSMESGEHMPDK--------------------------------------RKFVQELARV 212 (340)
T ss_pred EcC---cccCCCCCCCccEEEECCchhccCCH--------------------------------------HHHHHHHHHH
Confidence 333 22333688999999999999884321 1356667788
Q ss_pred cccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEE
Q 017439 218 LVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIM 297 (371)
Q Consensus 218 L~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~ 297 (371)
|+|||++++......+..+.... .-..-...+..+.. .+.+|. ..+.+|+.+++++.| |+....
T Consensus 213 LkpGG~lvi~~~~~~~~~~~~~~----l~~~~~~~~~~i~~----------~~~~p~-~~s~~~~~~~l~~aG-f~~v~~ 276 (340)
T PLN02244 213 AAPGGRIIIVTWCHRDLEPGETS----LKPDEQKLLDKICA----------AYYLPA-WCSTSDYVKLAESLG-LQDIKT 276 (340)
T ss_pred cCCCcEEEEEEeccccccccccc----CCHHHHHHHHHHHh----------hccCCC-CCCHHHHHHHHHHCC-CCeeEe
Confidence 99999999987654432221100 00111112222211 122332 358999999999987 988776
Q ss_pred EEe
Q 017439 298 NTF 300 (371)
Q Consensus 298 e~~ 300 (371)
+.+
T Consensus 277 ~d~ 279 (340)
T PLN02244 277 EDW 279 (340)
T ss_pred eeC
Confidence 644
|
|
| >PTZ00098 phosphoethanolamine N-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=2e-07 Score=89.32 Aligned_cols=194 Identities=14% Similarity=0.079 Sum_probs=108.6
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC-CcceeeeccC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL-SKKYFATGVP 141 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~-~~~~f~~gvp 141 (371)
...+|+|+|||+|..+..+. . ++ ..+|+..|+..+--...=+..+. .+-.|..
T Consensus 52 ~~~~VLDiGcG~G~~a~~la--------~-~~--------------~~~v~giD~s~~~~~~a~~~~~~~~~i~~~~--- 105 (263)
T PTZ00098 52 ENSKVLDIGSGLGGGCKYIN--------E-KY--------------GAHVHGVDICEKMVNIAKLRNSDKNKIEFEA--- 105 (263)
T ss_pred CCCEEEEEcCCCChhhHHHH--------h-hc--------------CCEEEEEECCHHHHHHHHHHcCcCCceEEEE---
Confidence 45789999999999887665 2 11 12566777654432211111111 1122333
Q ss_pred CCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccC
Q 017439 142 GSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPG 221 (371)
Q Consensus 142 gSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 221 (371)
+++...-+|++++|+++|+.++|++ |. +|...+|+.-++-|+||
T Consensus 106 ~D~~~~~~~~~~FD~V~s~~~l~h~---~~---------------------------------~d~~~~l~~i~r~LkPG 149 (263)
T PTZ00098 106 NDILKKDFPENTFDMIYSRDAILHL---SY---------------------------------ADKKKLFEKCYKWLKPN 149 (263)
T ss_pred CCcccCCCCCCCeEEEEEhhhHHhC---CH---------------------------------HHHHHHHHHHHHHcCCC
Confidence 3444545789999999998887653 31 24445788888999999
Q ss_pred ceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEee
Q 017439 222 GLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFT 301 (371)
Q Consensus 222 G~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~~ 301 (371)
|+++++-....+... .-+.+...+. .. .+..++++++.+++++.| |++...+...
T Consensus 150 G~lvi~d~~~~~~~~--------~~~~~~~~~~----~~------------~~~~~~~~~~~~~l~~aG-F~~v~~~d~~ 204 (263)
T PTZ00098 150 GILLITDYCADKIEN--------WDEEFKAYIK----KR------------KYTLIPIQEYGDLIKSCN-FQNVVAKDIS 204 (263)
T ss_pred cEEEEEEeccccccC--------cHHHHHHHHH----hc------------CCCCCCHHHHHHHHHHCC-CCeeeEEeCc
Confidence 999998665443211 0111222111 10 123579999999999987 9987776542
Q ss_pred cCcccccccHHHHHHhHHHhhhhhhhhhhcHHHHHHHHHHHHHHHH
Q 017439 302 HPLVHMVYSAEFWASLSRAAFGGLVGQHFGYQFVDRIFNYYSTKLA 347 (371)
Q Consensus 302 ~p~~~~~~~~~~~a~~iRa~~~~~l~~h~ge~i~delf~r~~~~~~ 347 (371)
.-|.. .. ..+...+++-- .-+.+.+|++..+.+-.-+.+.+.
T Consensus 205 ~~~~~--~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 246 (263)
T PTZ00098 205 DYWLE--LL-QVELKKLEEKK-EEFLKLYSEKEYNSLKDGWTRKIK 246 (263)
T ss_pred HHHHH--HH-HHHHHHHHHhH-HHHHHhcCHHHHHHHHHHHHHHHH
Confidence 22210 01 11112222222 222335677766666666655543
|
|
| >PLN02233 ubiquinone biosynthesis methyltransferase | Back alignment and domain information |
|---|
Probab=98.79 E-value=1.3e-07 Score=90.45 Aligned_cols=164 Identities=15% Similarity=0.122 Sum_probs=90.9
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC------CCccee
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP------LSKKYF 136 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~------~~~~~f 136 (371)
...+|+|+|||+|..+..+. + ++. | .-+|+.-|.-.+--...=+..+ ..+--|
T Consensus 73 ~~~~VLDlGcGtG~~~~~la--------~-~~~---------~---~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~ 131 (261)
T PLN02233 73 MGDRVLDLCCGSGDLAFLLS--------E-KVG---------S---DGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEW 131 (261)
T ss_pred CCCEEEEECCcCCHHHHHHH--------H-HhC---------C---CCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEE
Confidence 35799999999999776554 2 221 1 2256666665543222211111 011124
Q ss_pred eeccCCCccccc-CCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHH
Q 017439 137 ATGVPGSFHGRL-FPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARA 215 (371)
Q Consensus 137 ~~gvpgSFy~rL-fP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra 215 (371)
..+. ...+ +|++|+|++++++++||+.+. ..+|+.-+
T Consensus 132 ~~~d----~~~lp~~~~sfD~V~~~~~l~~~~d~--------------------------------------~~~l~ei~ 169 (261)
T PLN02233 132 IEGD----ATDLPFDDCYFDAITMGYGLRNVVDR--------------------------------------LKAMQEMY 169 (261)
T ss_pred EEcc----cccCCCCCCCEeEEEEecccccCCCH--------------------------------------HHHHHHHH
Confidence 4443 2233 688999999999999995431 23677777
Q ss_pred hhcccCceEEEEecCcCCCCCCCCCCCcchHHH-HHHHHHHHH-HcCCCchhhhcccCcc---cccCCHHHHHHHhhcCC
Q 017439 216 QELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDY-LGSCLYDLA-NMGLIAEEKVDSFNVP---MYYPFLGELMGHIKRNK 290 (371)
Q Consensus 216 ~EL~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~-l~~al~~mv-~eGli~~e~~d~fn~P---~Y~ps~eE~~~~i~~~g 290 (371)
+-|+|||++++.-.+.++.... ..+++. +...+.-+. .-|.- +.+. .++ --+++.+|+.+.+++.|
T Consensus 170 rvLkpGG~l~i~d~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~--~~y~--~l~~s~~~f~s~~el~~ll~~aG 240 (261)
T PLN02233 170 RVLKPGSRVSILDFNKSTQPFT-----TSMQEWMIDNVVVPVATGYGLA--KEYE--YLKSSINEYLTGEELEKLALEAG 240 (261)
T ss_pred HHcCcCcEEEEEECCCCCcHHH-----HHHHHHHHhhhhhHHHHHhCCh--HHHH--HHHHHHHhcCCHHHHHHHHHHCC
Confidence 8999999999998877553210 001111 111110000 01211 1110 000 11789999999999987
Q ss_pred ceEEEEEEE
Q 017439 291 NFSIEIMNT 299 (371)
Q Consensus 291 ~F~I~~~e~ 299 (371)
|++.....
T Consensus 241 -F~~~~~~~ 248 (261)
T PLN02233 241 -FSSAKHYE 248 (261)
T ss_pred -CCEEEEEE
Confidence 98665443
|
|
| >PF13489 Methyltransf_23: Methyltransferase domain; PDB: 3JWJ_A 3JWH_B 2AOV_B 2AOT_A 1JQD_B 2AOX_A 1JQE_A 2AOU_B 2AOW_A 3DLI_C | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.5e-08 Score=87.76 Aligned_cols=138 Identities=22% Similarity=0.276 Sum_probs=86.6
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccC
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVP 141 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvp 141 (371)
....+|+|+|||+|.++..+. + .+ .++...|.-...-.. ...++
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~--------~------------~~----~~~~g~D~~~~~~~~------------~~~~~ 64 (161)
T PF13489_consen 21 KPGKRVLDIGCGTGSFLRALA--------K------------RG----FEVTGVDISPQMIEK------------RNVVF 64 (161)
T ss_dssp TTTSEEEEESSTTSHHHHHHH--------H------------TT----SEEEEEESSHHHHHH------------TTSEE
T ss_pred CCCCEEEEEcCCCCHHHHHHH--------H------------hC----CEEEEEECCHHHHhh------------hhhhh
Confidence 456799999999997755443 2 11 256666665433222 00111
Q ss_pred CCcc--cccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcc
Q 017439 142 GSFH--GRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELV 219 (371)
Q Consensus 142 gSFy--~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 219 (371)
..|. ...+|++++|+|+|+.+|||+.. | ..+|+.-.+-|+
T Consensus 65 ~~~~~~~~~~~~~~fD~i~~~~~l~~~~d-~-------------------------------------~~~l~~l~~~Lk 106 (161)
T PF13489_consen 65 DNFDAQDPPFPDGSFDLIICNDVLEHLPD-P-------------------------------------EEFLKELSRLLK 106 (161)
T ss_dssp EEEECHTHHCHSSSEEEEEEESSGGGSSH-H-------------------------------------HHHHHHHHHCEE
T ss_pred hhhhhhhhhccccchhhHhhHHHHhhccc-H-------------------------------------HHHHHHHHHhcC
Confidence 1121 34458899999999999999653 2 236888889999
Q ss_pred cCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEE
Q 017439 220 PGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEI 296 (371)
Q Consensus 220 pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~ 296 (371)
|||++++..+.+... ....+... ....... --..+.+.++++.++++.| |+|+.
T Consensus 107 pgG~l~~~~~~~~~~--------------~~~~~~~~---~~~~~~~-----~~~~~~~~~~~~~ll~~~G-~~iv~ 160 (161)
T PF13489_consen 107 PGGYLVISDPNRDDP--------------SPRSFLKW---RYDRPYG-----GHVHFFSPDELRQLLEQAG-FEIVE 160 (161)
T ss_dssp EEEEEEEEEEBTTSH--------------HHHHHHHC---CGTCHHT-----TTTEEBBHHHHHHHHHHTT-EEEEE
T ss_pred CCCEEEEEEcCCcch--------------hhhHHHhc---CCcCccC-----ceeccCCHHHHHHHHHHCC-CEEEE
Confidence 999999999887431 00111110 1111100 1124669999999999988 98864
|
... |
| >PLN02336 phosphoethanolamine N-methyltransferase | Back alignment and domain information |
|---|
Probab=98.76 E-value=4.4e-07 Score=93.66 Aligned_cols=191 Identities=16% Similarity=0.199 Sum_probs=107.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhc-CCC--Ccceeeec
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKS-VPL--SKKYFATG 139 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~-l~~--~~~~f~~g 139 (371)
...+|+|+|||+|..++.+. . ++ ..+++..|+...- -...+. ... .+--|..+
T Consensus 266 ~~~~vLDiGcG~G~~~~~la--------~-~~--------------~~~v~gvDiS~~~-l~~A~~~~~~~~~~v~~~~~ 321 (475)
T PLN02336 266 PGQKVLDVGCGIGGGDFYMA--------E-NF--------------DVHVVGIDLSVNM-ISFALERAIGRKCSVEFEVA 321 (475)
T ss_pred CCCEEEEEeccCCHHHHHHH--------H-hc--------------CCEEEEEECCHHH-HHHHHHHhhcCCCceEEEEc
Confidence 34699999999998776554 2 11 1246666764322 111111 110 11123333
Q ss_pred cCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcc
Q 017439 140 VPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELV 219 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 219 (371)
.+....+|++++|+++|..+++|+...+ .+|+.-++-|+
T Consensus 322 ---d~~~~~~~~~~fD~I~s~~~l~h~~d~~--------------------------------------~~l~~~~r~Lk 360 (475)
T PLN02336 322 ---DCTKKTYPDNSFDVIYSRDTILHIQDKP--------------------------------------ALFRSFFKWLK 360 (475)
T ss_pred ---CcccCCCCCCCEEEEEECCcccccCCHH--------------------------------------HHHHHHHHHcC
Confidence 3455557889999999999999964311 25777778999
Q ss_pred cCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEE
Q 017439 220 PGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNT 299 (371)
Q Consensus 220 pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~ 299 (371)
|||++++....+.+..+. ..+...+. ..| ...++.+++.+.+++.| |++...+.
T Consensus 361 pgG~l~i~~~~~~~~~~~---------~~~~~~~~---~~g-------------~~~~~~~~~~~~l~~aG-F~~i~~~d 414 (475)
T PLN02336 361 PGGKVLISDYCRSPGTPS---------PEFAEYIK---QRG-------------YDLHDVQAYGQMLKDAG-FDDVIAED 414 (475)
T ss_pred CCeEEEEEEeccCCCCCc---------HHHHHHHH---hcC-------------CCCCCHHHHHHHHHHCC-Ceeeeeec
Confidence 999999998776543221 11111111 112 23678999999999987 99887765
Q ss_pred eecCcccccccHHHHHHhHHHhhhhhhhhhhcHHHHHHHHHHHHHHHHH
Q 017439 300 FTHPLVHMVYSAEFWASLSRAAFGGLVGQHFGYQFVDRIFNYYSTKLAE 348 (371)
Q Consensus 300 ~~~p~~~~~~~~~~~a~~iRa~~~~~l~~h~ge~i~delf~r~~~~~~~ 348 (371)
....+.. .-..+...+++-.+.++ ..+|++..+.+...+...+..
T Consensus 415 ~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~ 459 (475)
T PLN02336 415 RTDQFLQ---VLQRELDAVEKEKDEFI-SDFSEEDYNDIVGGWKAKLVR 459 (475)
T ss_pred chHHHHH---HHHHHHHHHHhCHHHHH-HhcCHHHHHHHHHhHHHHHhh
Confidence 4322210 00111111121112222 346666666666666655543
|
|
| >PRK15068 tRNA mo(5)U34 methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.76 E-value=4.1e-08 Score=96.84 Aligned_cols=148 Identities=18% Similarity=0.221 Sum_probs=92.6
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC----CCCcc-eeee
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV----PLSKK-YFAT 138 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l----~~~~~-~f~~ 138 (371)
.-+|+|+|||+|..++.+. . . -| . +|+--| |+..+..-++.+ ....+ .|..
T Consensus 123 g~~VLDIGCG~G~~~~~la--------~-~----------g~---~-~V~GiD-~S~~~l~q~~a~~~~~~~~~~i~~~~ 178 (322)
T PRK15068 123 GRTVLDVGCGNGYHMWRML--------G-A----------GA---K-LVVGID-PSQLFLCQFEAVRKLLGNDQRAHLLP 178 (322)
T ss_pred CCEEEEeccCCcHHHHHHH--------H-c----------CC---C-EEEEEc-CCHHHHHHHHHHHHhcCCCCCeEEEe
Confidence 4699999999999998766 2 1 12 2 477788 443333332221 11222 2333
Q ss_pred ccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 139 GVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 139 gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
+ . .+.+-.++++|+++|..+|||+.. | ..+|+.-++-|
T Consensus 179 ~---d-~e~lp~~~~FD~V~s~~vl~H~~d-p-------------------------------------~~~L~~l~~~L 216 (322)
T PRK15068 179 L---G-IEQLPALKAFDTVFSMGVLYHRRS-P-------------------------------------LDHLKQLKDQL 216 (322)
T ss_pred C---C-HHHCCCcCCcCEEEECChhhccCC-H-------------------------------------HHHHHHHHHhc
Confidence 2 2 234433789999999999998433 2 23677778899
Q ss_pred ccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEE
Q 017439 219 VPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMN 298 (371)
Q Consensus 219 ~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e 298 (371)
+|||++++..+..+..... .+...+.+..+.-.++.||.+++..++++.| |++.++.
T Consensus 217 kpGG~lvl~~~~i~~~~~~----------------------~l~p~~~y~~~~~~~~lps~~~l~~~L~~aG-F~~i~~~ 273 (322)
T PRK15068 217 VPGGELVLETLVIDGDENT----------------------VLVPGDRYAKMRNVYFIPSVPALKNWLERAG-FKDVRIV 273 (322)
T ss_pred CCCcEEEEEEEEecCCCcc----------------------ccCchhHHhcCccceeCCCHHHHHHHHHHcC-CceEEEE
Confidence 9999999987554432110 0111222233333456799999999999988 9988776
Q ss_pred Ee
Q 017439 299 TF 300 (371)
Q Consensus 299 ~~ 300 (371)
..
T Consensus 274 ~~ 275 (322)
T PRK15068 274 DV 275 (322)
T ss_pred eC
Confidence 54
|
|
| >TIGR00740 methyltransferase, putative | Back alignment and domain information |
|---|
Probab=98.72 E-value=1.6e-07 Score=88.21 Aligned_cols=159 Identities=17% Similarity=0.167 Sum_probs=92.5
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC---CCcc-eeeec
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP---LSKK-YFATG 139 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~---~~~~-~f~~g 139 (371)
..+|+|+|||+|..+..+. + ++. .| ..+++.-|+-.+--...=+.+. ...+ -|..
T Consensus 54 ~~~iLDlGcG~G~~~~~l~--------~-~~~--------~p---~~~v~gvD~s~~ml~~a~~~~~~~~~~~~v~~~~- 112 (239)
T TIGR00740 54 DSNVYDLGCSRGAATLSAR--------R-NIN--------QP---NVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILC- 112 (239)
T ss_pred CCEEEEecCCCCHHHHHHH--------H-hcC--------CC---CCeEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEE-
Confidence 4589999999999888776 2 221 22 3467777764432211111111 1111 2332
Q ss_pred cCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcc
Q 017439 140 VPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELV 219 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 219 (371)
+++..- |..+.|+++|++++||++. +|...+|+.-.+-|+
T Consensus 113 --~d~~~~--~~~~~d~v~~~~~l~~~~~------------------------------------~~~~~~l~~i~~~Lk 152 (239)
T TIGR00740 113 --NDIRHV--EIKNASMVILNFTLQFLPP------------------------------------EDRIALLTKIYEGLN 152 (239)
T ss_pred --CChhhC--CCCCCCEEeeecchhhCCH------------------------------------HHHHHHHHHHHHhcC
Confidence 344332 3335889999999999632 233457888889999
Q ss_pred cCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHH-cCCCchhhh----cccCcccccCCHHHHHHHhhcCCceE
Q 017439 220 PGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLAN-MGLIAEEKV----DSFNVPMYYPFLGELMGHIKRNKNFS 293 (371)
Q Consensus 220 pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~-eGli~~e~~----d~fn~P~Y~ps~eE~~~~i~~~g~F~ 293 (371)
|||++++.-..+.+... ..+.+.+.+..+.. +|. +++++ +.+.-.....|++|+++.+++.| |+
T Consensus 153 pgG~l~i~d~~~~~~~~--------~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aG-F~ 221 (239)
T TIGR00740 153 PNGVLVLSEKFRFEDTK--------INHLLIDLHHQFKRANGY-SELEISQKRTALENVMRTDSIETHKARLKNVG-FS 221 (239)
T ss_pred CCeEEEEeecccCCCHh--------HHHHHHHHHHHHHHHcCC-CHHHHHHHHHHHhccCCCCCHHHHHHHHHHcC-Cc
Confidence 99999988654433211 12334444443333 343 44433 22222334579999999999987 75
|
A simple BLAST search finds all members of this family and weaker hits to a large number of known and predicted methyltransferases. A single iteration with PSI-BLAST, keeping only clear members of the family, leads to a large number of highly significant hits to a set of known and predicted methyltransferases with a large repertoire of different specifities. This model is restricted to a subfamily found so far only in the Proteobacteria, sharing consistent length, full-length homology, and on average better than 35 % identity. It is reasonable to predict equivalent function within this subfamily. |
| >TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase | Back alignment and domain information |
|---|
Probab=98.72 E-value=5.2e-08 Score=90.60 Aligned_cols=171 Identities=16% Similarity=0.105 Sum_probs=92.6
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC---CCcceeeecc
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP---LSKKYFATGV 140 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~---~~~~~f~~gv 140 (371)
.-+|+|+|||+|..+..+. + .+ .| ..+++..|+..+--...=+.+. ..+--++.+.
T Consensus 46 ~~~vLDiGcG~G~~~~~la--------~-~~---------~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~~~~~d 104 (231)
T TIGR02752 46 GTSALDVCCGTADWSIALA--------E-AV---------GP---EGHVIGLDFSENMLSVGRQKVKDAGLHNVELVHGN 104 (231)
T ss_pred CCEEEEeCCCcCHHHHHHH--------H-Hh---------CC---CCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEec
Confidence 4699999999999888666 2 22 12 2367778875433221111111 1111233332
Q ss_pred CCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc
Q 017439 141 PGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP 220 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 220 (371)
+..--+|++++|+++++.++||++.. ..+|+.-.+-|+|
T Consensus 105 ---~~~~~~~~~~fD~V~~~~~l~~~~~~--------------------------------------~~~l~~~~~~Lk~ 143 (231)
T TIGR02752 105 ---AMELPFDDNSFDYVTIGFGLRNVPDY--------------------------------------MQVLREMYRVVKP 143 (231)
T ss_pred ---hhcCCCCCCCccEEEEecccccCCCH--------------------------------------HHHHHHHHHHcCc
Confidence 23323678999999999999995431 1256667788999
Q ss_pred CceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEe
Q 017439 221 GGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTF 300 (371)
Q Consensus 221 GG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~ 300 (371)
||++++.-.+.++....... ....+..+-..+..+...+........ ..-..+|+.+|+++.+++.| |++.+++.+
T Consensus 144 gG~l~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~l~~aG-f~~~~~~~~ 219 (231)
T TIGR02752 144 GGKVVCLETSQPTIPGFKQL-YFFYFKYIMPLFGKLFAKSYKEYSWLQ--ESTRDFPGMDELAEMFQEAG-FKDVEVKSY 219 (231)
T ss_pred CeEEEEEECCCCCChHHHHH-HHHHHcChhHHhhHHhcCCHHHHHHHH--HHHHHcCCHHHHHHHHHHcC-CCeeEEEEc
Confidence 99999876554432110000 000000001111111111110000000 01124789999999999988 998877765
|
MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species. |
| >PRK08317 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.70 E-value=2.1e-06 Score=79.06 Aligned_cols=218 Identities=15% Similarity=0.104 Sum_probs=112.1
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC--CCCcceeeecc
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV--PLSKKYFATGV 140 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l--~~~~~~f~~gv 140 (371)
...+|+|+|||+|..+..+. . ++. | .-+++.-|+-.+-....-+.. ....-.|..+.
T Consensus 19 ~~~~vLdiG~G~G~~~~~~a--------~-~~~---------~---~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d 77 (241)
T PRK08317 19 PGDRVLDVGCGPGNDARELA--------R-RVG---------P---EGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGD 77 (241)
T ss_pred CCCEEEEeCCCCCHHHHHHH--------H-hcC---------C---CcEEEEEeCCHHHHHHHHHHhhCCCCceEEEecc
Confidence 45799999999999887666 2 221 1 225666666443222111110 01111233222
Q ss_pred CCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc
Q 017439 141 PGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP 220 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 220 (371)
+...-++++++|++++..++||+.+. ..+|+.-.+-|+|
T Consensus 78 ---~~~~~~~~~~~D~v~~~~~~~~~~~~--------------------------------------~~~l~~~~~~L~~ 116 (241)
T PRK08317 78 ---ADGLPFPDGSFDAVRSDRVLQHLEDP--------------------------------------ARALAEIARVLRP 116 (241)
T ss_pred ---cccCCCCCCCceEEEEechhhccCCH--------------------------------------HHHHHHHHHHhcC
Confidence 22223578899999999999996542 2257777889999
Q ss_pred CceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEe
Q 017439 221 GGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTF 300 (371)
Q Consensus 221 GG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~ 300 (371)
||.+++....-+.... .......+..+...|. ..+. + ..+..++.+.+++.| |+...++.+
T Consensus 117 gG~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~---~~~~------~-------~~~~~~~~~~l~~aG-f~~~~~~~~ 177 (241)
T PRK08317 117 GGRVVVLDTDWDTLVW--HSGDRALMRKILNFWS---DHFA------D-------PWLGRRLPGLFREAG-LTDIEVEPY 177 (241)
T ss_pred CcEEEEEecCCCceee--cCCChHHHHHHHHHHH---hcCC------C-------CcHHHHHHHHHHHcC-CCceeEEEE
Confidence 9999988753221100 0001111222222222 1110 0 224568999999987 988777766
Q ss_pred ecCcccc-ccc-HHHHHHhHHHhhhhhhhhhhcHHHHHHHHHHHHHHHHHhhhhhccCCCCCeEEEEEEEEeC
Q 017439 301 THPLVHM-VYS-AEFWASLSRAAFGGLVGQHFGYQFVDRIFNYYSTKLAENMSSICDGKTQDKIELFVLLRRN 371 (371)
Q Consensus 301 ~~p~~~~-~~~-~~~~a~~iRa~~~~~l~~h~ge~i~delf~r~~~~~~~~~~~~~~~~~~~~~~~~~~L~r~ 371 (371)
..+.... +.+ ...+...++...+ ...+.++-++++++..++..... ...-.+.++++..||
T Consensus 178 ~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~-------~~~~~~~~~~~~~~k 240 (241)
T PRK08317 178 TLIETDLKEADKGFGLIRAARRAVE---AGGISADEADAWLADLAQLARAG-------EFFFSVTGFLVVGRK 240 (241)
T ss_pred EEeccCcchhhHHHHHHHHHHHHHH---cCCCCHHHHHHHHHHHHHHHhcC-------CEEEEEEEEEEEEeC
Confidence 4332110 111 1122222333322 12245566677777766654321 112246666666554
|
|
| >TIGR00452 methyltransferase, putative | Back alignment and domain information |
|---|
Probab=98.65 E-value=5.2e-07 Score=88.79 Aligned_cols=149 Identities=17% Similarity=0.198 Sum_probs=88.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC----CCCcce-ee
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV----PLSKKY-FA 137 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l----~~~~~~-f~ 137 (371)
+.-+|+|+|||+|..+..++ . . -+ . .|+--|.-. .|-.-|..+ .....+ +.
T Consensus 121 ~g~~VLDvGCG~G~~~~~~~--------~-~----------g~---~-~v~GiDpS~-~ml~q~~~~~~~~~~~~~v~~~ 176 (314)
T TIGR00452 121 KGRTILDVGCGSGYHMWRML--------G-H----------GA---K-SLVGIDPTV-LFLCQFEAVRKLLDNDKRAILE 176 (314)
T ss_pred CCCEEEEeccCCcHHHHHHH--------H-c----------CC---C-EEEEEcCCH-HHHHHHHHHHHHhccCCCeEEE
Confidence 34699999999999876655 2 1 11 1 355555333 222222211 111111 22
Q ss_pred eccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 138 TGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 138 ~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
. +. .+.+-+.+++|+|+|+.+|||+.. | ..+|+.-++-
T Consensus 177 ~---~~-ie~lp~~~~FD~V~s~gvL~H~~d-p-------------------------------------~~~L~el~r~ 214 (314)
T TIGR00452 177 P---LG-IEQLHELYAFDTVFSMGVLYHRKS-P-------------------------------------LEHLKQLKHQ 214 (314)
T ss_pred E---CC-HHHCCCCCCcCEEEEcchhhccCC-H-------------------------------------HHHHHHHHHh
Confidence 1 11 345555679999999999999532 2 1257788889
Q ss_pred cccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEE
Q 017439 218 LVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIM 297 (371)
Q Consensus 218 L~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~ 297 (371)
|+|||+|++.....+.... . .+...+.+..+.-.++.||.+++..++++.| |+..++
T Consensus 215 LkpGG~Lvletl~i~g~~~------~----------------~l~p~~ry~k~~nv~flpS~~~L~~~L~~aG-F~~V~i 271 (314)
T TIGR00452 215 LVIKGELVLETLVIDGDLN------T----------------VLVPKDRYAKMKNVYFIPSVSALKNWLEKVG-FENFRI 271 (314)
T ss_pred cCCCCEEEEEEEEecCccc------c----------------ccCchHHHHhccccccCCCHHHHHHHHHHCC-CeEEEE
Confidence 9999999998764432110 0 0011122233333466799999999999987 987776
Q ss_pred EEe
Q 017439 298 NTF 300 (371)
Q Consensus 298 e~~ 300 (371)
...
T Consensus 272 ~~~ 274 (314)
T TIGR00452 272 LDV 274 (314)
T ss_pred Eec
Confidence 654
|
Known examples to date are restricted to the proteobacteria. |
| >PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.63 E-value=3.7e-07 Score=86.70 Aligned_cols=158 Identities=15% Similarity=0.151 Sum_probs=90.6
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC----Ccceeee
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL----SKKYFAT 138 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~----~~~~f~~ 138 (371)
.+.+|+|+|||+|..|..+. + + ..+|+..|+-.+--...=+.+.. .+-.|+.
T Consensus 44 ~~~~vLDiGcG~G~~a~~la--------~-~---------------g~~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~ 99 (255)
T PRK11036 44 RPLRVLDAGGGEGQTAIKLA--------E-L---------------GHQVILCDLSAEMIQRAKQAAEAKGVSDNMQFIH 99 (255)
T ss_pred CCCEEEEeCCCchHHHHHHH--------H-c---------------CCEEEEEECCHHHHHHHHHHHHhcCCccceEEEE
Confidence 45799999999999887776 2 1 11456666544332211111111 1112333
Q ss_pred ccCCCccccc--CCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHh
Q 017439 139 GVPGSFHGRL--FPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQ 216 (371)
Q Consensus 139 gvpgSFy~rL--fP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~ 216 (371)
+. . ..+ ++++++|++++..+|||+...+ .+|+.-++
T Consensus 100 ~d---~-~~l~~~~~~~fD~V~~~~vl~~~~~~~--------------------------------------~~l~~~~~ 137 (255)
T PRK11036 100 CA---A-QDIAQHLETPVDLILFHAVLEWVADPK--------------------------------------SVLQTLWS 137 (255)
T ss_pred cC---H-HHHhhhcCCCCCEEEehhHHHhhCCHH--------------------------------------HHHHHHHH
Confidence 32 1 112 4678999999999999975421 14566667
Q ss_pred hcccCceEEEEecCcCCCCCCCCCCCcchH-HHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEE
Q 017439 217 ELVPGGLLLLLTPTIRDGIPMFSTPEGTNF-DYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIE 295 (371)
Q Consensus 217 EL~pGG~lvl~~~gr~~~~~~~~~~~~~~~-~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~ 295 (371)
-|+|||++++.+...... .+ ..+..-+. .+..|+...+.. .-.|.+..+++|+.+++++.| |+++
T Consensus 138 ~LkpgG~l~i~~~n~~~~----------~~~~~~~~~~~-~~~~~~~~~~~~--~~~p~~~~~~~~l~~~l~~aG-f~~~ 203 (255)
T PRK11036 138 VLRPGGALSLMFYNANGL----------LMHNMVAGNFD-YVQAGMPKRKKR--TLSPDYPLDPEQVYQWLEEAG-WQIM 203 (255)
T ss_pred HcCCCeEEEEEEECccHH----------HHHHHHccChH-HHHhcCcccccc--CCCCCCCCCHHHHHHHHHHCC-CeEe
Confidence 899999999887554211 01 11111111 122333221111 123566789999999999887 9987
Q ss_pred EEEEe
Q 017439 296 IMNTF 300 (371)
Q Consensus 296 ~~e~~ 300 (371)
...-+
T Consensus 204 ~~~gi 208 (255)
T PRK11036 204 GKTGV 208 (255)
T ss_pred eeeeE
Confidence 66654
|
|
| >PRK11207 tellurite resistance protein TehB; Provisional | Back alignment and domain information |
|---|
Probab=98.60 E-value=7e-07 Score=81.82 Aligned_cols=77 Identities=18% Similarity=0.241 Sum_probs=52.0
Q ss_pred CCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEe-c
Q 017439 151 ESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLT-P 229 (371)
Q Consensus 151 ~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~-~ 229 (371)
++++|+++|+.++||+.. .|...+++.-++-|+|||++++.. +
T Consensus 93 ~~~fD~I~~~~~~~~~~~------------------------------------~~~~~~l~~i~~~LkpgG~~~~~~~~ 136 (197)
T PRK11207 93 DGEYDFILSTVVLMFLEA------------------------------------KTIPGLIANMQRCTKPGGYNLIVAAM 136 (197)
T ss_pred CCCcCEEEEecchhhCCH------------------------------------HHHHHHHHHHHHHcCCCcEEEEEEEe
Confidence 567999999999999632 234557888889999999965543 3
Q ss_pred CcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEE
Q 017439 230 TIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNT 299 (371)
Q Consensus 230 gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~ 299 (371)
..++. +. . .| |-+..+.+|+++.++ | |++.+.+.
T Consensus 137 ~~~~~-~~-~-------------------~~------------~~~~~~~~el~~~~~--~-~~~~~~~~ 170 (197)
T PRK11207 137 DTADY-PC-T-------------------VG------------FPFAFKEGELRRYYE--G-WEMVKYNE 170 (197)
T ss_pred cCCCC-CC-C-------------------CC------------CCCccCHHHHHHHhC--C-CeEEEeeC
Confidence 32211 10 0 01 235578999999887 4 88877743
|
|
| >PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional | Back alignment and domain information |
|---|
Probab=98.57 E-value=7.5e-06 Score=82.74 Aligned_cols=145 Identities=14% Similarity=0.167 Sum_probs=89.0
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCCC
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPGS 143 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpgS 143 (371)
..+|+|+|||+|..++.+.+ ++ ..+|+.-|+-.+-....=+......--+..+.
T Consensus 168 g~rVLDIGcG~G~~a~~la~---------~~--------------g~~V~giDlS~~~l~~A~~~~~~l~v~~~~~D--- 221 (383)
T PRK11705 168 GMRVLDIGCGWGGLARYAAE---------HY--------------GVSVVGVTISAEQQKLAQERCAGLPVEIRLQD--- 221 (383)
T ss_pred CCEEEEeCCCccHHHHHHHH---------HC--------------CCEEEEEeCCHHHHHHHHHHhccCeEEEEECc---
Confidence 46999999999998876652 11 11344555543332221111111011122222
Q ss_pred cccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCce
Q 017439 144 FHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGL 223 (371)
Q Consensus 144 Fy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~ 223 (371)
|..+ ++++|.++|...++|+ +. +++..+|+.-.+-|+|||+
T Consensus 222 -~~~l--~~~fD~Ivs~~~~ehv---g~---------------------------------~~~~~~l~~i~r~LkpGG~ 262 (383)
T PRK11705 222 -YRDL--NGQFDRIVSVGMFEHV---GP---------------------------------KNYRTYFEVVRRCLKPDGL 262 (383)
T ss_pred -hhhc--CCCCCEEEEeCchhhC---Ch---------------------------------HHHHHHHHHHHHHcCCCcE
Confidence 2233 5789999999999884 31 2344578888899999999
Q ss_pred EEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCccc-ccCCHHHHHHHhhcCCceEEEEEEEe
Q 017439 224 LLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPM-YYPFLGELMGHIKRNKNFSIEIMNTF 300 (371)
Q Consensus 224 lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~-Y~ps~eE~~~~i~~~g~F~I~~~e~~ 300 (371)
+++...+.+...... ..-++.+.+|- +.|+.+++.+..+. .|+|+.++.+
T Consensus 263 lvl~~i~~~~~~~~~-------------------------~~~i~~yifp~g~lps~~~i~~~~~~--~~~v~d~~~~ 313 (383)
T PRK11705 263 FLLHTIGSNKTDTNV-------------------------DPWINKYIFPNGCLPSVRQIAQASEG--LFVMEDWHNF 313 (383)
T ss_pred EEEEEccCCCCCCCC-------------------------CCCceeeecCCCcCCCHHHHHHHHHC--CcEEEEEecC
Confidence 999988766431100 01123455663 68999999998774 5999888766
|
|
| >PRK06202 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.49 E-value=3.7e-06 Score=78.61 Aligned_cols=165 Identities=13% Similarity=0.108 Sum_probs=89.0
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC-Ccceeeecc
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL-SKKYFATGV 140 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~-~~~~f~~gv 140 (371)
.+..+|+|+|||+|.++..+.. ..++ . .| ..+++..|+-.+--. ..+.... .+--+..+.
T Consensus 59 ~~~~~iLDlGcG~G~~~~~L~~----~~~~-----~------g~---~~~v~gvD~s~~~l~-~a~~~~~~~~~~~~~~~ 119 (232)
T PRK06202 59 DRPLTLLDIGCGGGDLAIDLAR----WARR-----D------GL---RLEVTAIDPDPRAVA-FARANPRRPGVTFRQAV 119 (232)
T ss_pred CCCcEEEEeccCCCHHHHHHHH----HHHh-----C------CC---CcEEEEEcCCHHHHH-HHHhccccCCCeEEEEe
Confidence 3567999999999998886552 1111 1 12 357888888665432 2222211 111222222
Q ss_pred CCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc
Q 017439 141 PGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP 220 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 220 (371)
...+- ++++++|+++|+.+|||+.. | ++..+|+.-++-++
T Consensus 120 ~~~l~---~~~~~fD~V~~~~~lhh~~d-~-----------------------------------~~~~~l~~~~r~~~- 159 (232)
T PRK06202 120 SDELV---AEGERFDVVTSNHFLHHLDD-A-----------------------------------EVVRLLADSAALAR- 159 (232)
T ss_pred ccccc---ccCCCccEEEECCeeecCCh-H-----------------------------------HHHHHHHHHHHhcC-
Confidence 22211 27789999999999999643 1 12234555544454
Q ss_pred CceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcC-CCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEE
Q 017439 221 GGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMG-LIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNT 299 (371)
Q Consensus 221 GG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eG-li~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~ 299 (371)
|.+++.-+.++.. .+.... ........| .+.++. ...-.-+++.+|+++.+++ | |++.+.-.
T Consensus 160 -~~~~i~dl~~~~~----------~~~~~~-~~~~~~~~~~~~~~d~---~~s~~~~~~~~el~~ll~~-G-f~~~~~~~ 222 (232)
T PRK06202 160 -RLVLHNDLIRSRL----------AYALFW-AGTRLLSRSSFVHTDG---LLSVRRSYTPAELAALAPQ-G-WRVERQWP 222 (232)
T ss_pred -eeEEEeccccCHH----------HHHHHH-HHHHHhccCceeeccc---hHHHHhhcCHHHHHHHhhC-C-CeEEeccc
Confidence 5555555555421 111111 111111112 222222 1112337899999999998 5 99988776
Q ss_pred eec
Q 017439 300 FTH 302 (371)
Q Consensus 300 ~~~ 302 (371)
|..
T Consensus 223 ~~~ 225 (232)
T PRK06202 223 FRY 225 (232)
T ss_pred eee
Confidence 643
|
|
| >PLN02396 hexaprenyldihydroxybenzoate methyltransferase | Back alignment and domain information |
|---|
Probab=98.49 E-value=4.6e-07 Score=89.49 Aligned_cols=154 Identities=13% Similarity=0.097 Sum_probs=89.1
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CC-Ccceeee
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PL-SKKYFAT 138 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~-~~~~f~~ 138 (371)
...+|+|+|||+|..+..+. + . ..+|+.-|.-..-....-+.. +. .+-.|..
T Consensus 131 ~g~~ILDIGCG~G~~s~~La--------~--~--------------g~~V~GID~s~~~i~~Ar~~~~~~~~~~~i~~~~ 186 (322)
T PLN02396 131 EGLKFIDIGCGGGLLSEPLA--------R--M--------------GATVTGVDAVDKNVKIARLHADMDPVTSTIEYLC 186 (322)
T ss_pred CCCEEEEeeCCCCHHHHHHH--------H--c--------------CCEEEEEeCCHHHHHHHHHHHHhcCcccceeEEe
Confidence 34699999999999877554 1 0 124555555543322221111 00 1112333
Q ss_pred ccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 139 GVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 139 gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
+ ++.+--++++++|++++..+|||+.+.+ .||+.-++-|
T Consensus 187 ~---dae~l~~~~~~FD~Vi~~~vLeHv~d~~--------------------------------------~~L~~l~r~L 225 (322)
T PLN02396 187 T---TAEKLADEGRKFDAVLSLEVIEHVANPA--------------------------------------EFCKSLSALT 225 (322)
T ss_pred c---CHHHhhhccCCCCEEEEhhHHHhcCCHH--------------------------------------HHHHHHHHHc
Confidence 3 2222124678999999999999965422 2788888899
Q ss_pred ccCceEEEEecCcCCCCCCCCCCCcchHHHH--HHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEE
Q 017439 219 VPGGLLLLLTPTIRDGIPMFSTPEGTNFDYL--GSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEI 296 (371)
Q Consensus 219 ~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l--~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~ 296 (371)
+|||++++....+... . .+..+ ..-+...+..|. .....+.+++|+++.+++.| |++..
T Consensus 226 kPGG~liist~nr~~~--------~-~~~~i~~~eyi~~~lp~gt---------h~~~~f~tp~eL~~lL~~aG-f~i~~ 286 (322)
T PLN02396 226 IPNGATVLSTINRTMR--------A-YASTIVGAEYILRWLPKGT---------HQWSSFVTPEELSMILQRAS-VDVKE 286 (322)
T ss_pred CCCcEEEEEECCcCHH--------H-HHHhhhhHHHHHhcCCCCC---------cCccCCCCHHHHHHHHHHcC-CeEEE
Confidence 9999999998755311 0 00000 001111111121 01123679999999999987 99887
Q ss_pred EEEe
Q 017439 297 MNTF 300 (371)
Q Consensus 297 ~e~~ 300 (371)
+.-+
T Consensus 287 ~~G~ 290 (322)
T PLN02396 287 MAGF 290 (322)
T ss_pred Eeee
Confidence 7655
|
|
| >PRK15451 tRNA cmo(5)U34 methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.48 E-value=1.8e-06 Score=81.82 Aligned_cols=160 Identities=15% Similarity=0.169 Sum_probs=88.4
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhc-CC---CC-cceee
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKS-VP---LS-KKYFA 137 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~-l~---~~-~~~f~ 137 (371)
...+|+|+|||+|.+++.+. + .+. .| ..+++.-|.-..-- ...+. +. .. +--+.
T Consensus 56 ~~~~vLDlGcGtG~~~~~l~--------~-~~~--------~~---~~~v~gvD~S~~ml-~~A~~~~~~~~~~~~v~~~ 114 (247)
T PRK15451 56 PGTQVYDLGCSLGAATLSVR--------R-NIH--------HD---NCKIIAIDNSPAMI-ERCRRHIDAYKAPTPVDVI 114 (247)
T ss_pred CCCEEEEEcccCCHHHHHHH--------H-hcC--------CC---CCeEEEEeCCHHHH-HHHHHHHHhcCCCCCeEEE
Confidence 34689999999999888765 2 111 12 33566666543321 11111 11 11 11122
Q ss_pred eccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 138 TGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 138 ~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
. |++.+ + |....|+++++.++||++. . +...+|+.-++-
T Consensus 115 ~---~d~~~-~-~~~~~D~vv~~~~l~~l~~--~----------------------------------~~~~~l~~i~~~ 153 (247)
T PRK15451 115 E---GDIRD-I-AIENASMVVLNFTLQFLEP--S----------------------------------ERQALLDKIYQG 153 (247)
T ss_pred e---CChhh-C-CCCCCCEEehhhHHHhCCH--H----------------------------------HHHHHHHHHHHh
Confidence 2 22222 2 3345899999999999652 1 122367777889
Q ss_pred cccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhccc---Cccccc-CCHHHHHHHhhcCCceE
Q 017439 218 LVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSF---NVPMYY-PFLGELMGHIKRNKNFS 293 (371)
Q Consensus 218 L~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f---n~P~Y~-ps~eE~~~~i~~~g~F~ 293 (371)
|+|||.+++.-.-..+... ..+.+...|.++....-.+++++..+ ---... -|+++..+++++.| |+
T Consensus 154 LkpGG~l~l~e~~~~~~~~--------~~~~~~~~~~~~~~~~g~s~~ei~~~~~~~~~~~~~~~~~~~~~~L~~aG-F~ 224 (247)
T PRK15451 154 LNPGGALVLSEKFSFEDAK--------VGELLFNMHHDFKRANGYSELEISQKRSMLENVMLTDSVETHKARLHKAG-FE 224 (247)
T ss_pred cCCCCEEEEEEecCCCcch--------hHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcccCCHHHHHHHHHHcC-ch
Confidence 9999999997533222211 22344555665554544555555321 001222 37888888888877 54
|
|
| >TIGR00477 tehB tellurite resistance protein TehB | Back alignment and domain information |
|---|
Probab=98.48 E-value=3.2e-06 Score=77.35 Aligned_cols=136 Identities=14% Similarity=0.142 Sum_probs=78.9
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC--C-cceeeecc
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL--S-KKYFATGV 140 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~--~-~~~f~~gv 140 (371)
+.+|+|+|||+|.+++.+.. + -.+|+.-|+..+--. ..+.... . +-.+..+.
T Consensus 31 ~~~vLDiGcG~G~~a~~la~---------~---------------g~~V~~iD~s~~~l~-~a~~~~~~~~~~v~~~~~d 85 (195)
T TIGR00477 31 PCKTLDLGCGQGRNSLYLSL---------A---------------GYDVRAWDHNPASIA-SVLDMKARENLPLRTDAYD 85 (195)
T ss_pred CCcEEEeCCCCCHHHHHHHH---------C---------------CCeEEEEECCHHHHH-HHHHHHHHhCCCceeEecc
Confidence 46999999999999998772 1 114555666432211 1111100 0 00111111
Q ss_pred CCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc
Q 017439 141 PGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP 220 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 220 (371)
. ...-+++++|+++|+.++||++. .|+..+++.-++-|+|
T Consensus 86 ---~-~~~~~~~~fD~I~~~~~~~~~~~------------------------------------~~~~~~l~~~~~~Lkp 125 (195)
T TIGR00477 86 ---I-NAAALNEDYDFIFSTVVFMFLQA------------------------------------GRVPEIIANMQAHTRP 125 (195)
T ss_pred ---c-hhccccCCCCEEEEecccccCCH------------------------------------HHHHHHHHHHHHHhCC
Confidence 1 11123468999999999999532 2344578888899999
Q ss_pred CceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEE
Q 017439 221 GGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNT 299 (371)
Q Consensus 221 GG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~ 299 (371)
||++++......+..+. | . .|-|-.+++|+++.++. |++.+.+.
T Consensus 126 gG~lli~~~~~~~~~~~----------------------~---------~-~~~~~~~~~el~~~f~~---~~~~~~~e 169 (195)
T TIGR00477 126 GGYNLIVAAMDTADYPC----------------------H---------M-PFSFTFKEDELRQYYAD---WELLKYNE 169 (195)
T ss_pred CcEEEEEEecccCCCCC----------------------C---------C-CcCccCCHHHHHHHhCC---CeEEEeec
Confidence 99966554322221110 1 0 12346789999998873 88877763
|
Part of a tellurite-reducing operon tehA and tehB |
| >PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals | Back alignment and domain information |
|---|
Probab=98.47 E-value=5e-07 Score=70.95 Aligned_cols=95 Identities=26% Similarity=0.308 Sum_probs=61.1
Q ss_pred eeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCCCcccc
Q 017439 68 ADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPGSFHGR 147 (371)
Q Consensus 68 aDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpgSFy~r 147 (371)
+|+|||+|.++..+. + + . ...++-.|.-..--...=+.......-+..+. +..-
T Consensus 1 LdiG~G~G~~~~~l~--------~-~--~------------~~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~d---~~~l 54 (95)
T PF08241_consen 1 LDIGCGTGRFAAALA--------K-R--G------------GASVTGIDISEEMLEQARKRLKNEGVSFRQGD---AEDL 54 (95)
T ss_dssp EEET-TTSHHHHHHH--------H-T--T------------TCEEEEEES-HHHHHHHHHHTTTSTEEEEESB---TTSS
T ss_pred CEecCcCCHHHHHHH--------h-c--c------------CCEEEEEeCCHHHHHHHHhcccccCchheeeh---HHhC
Confidence 699999999999888 3 1 0 12566666655533333333332222244443 4444
Q ss_pred cCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEE
Q 017439 148 LFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLL 226 (371)
Q Consensus 148 LfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl 226 (371)
-||++|+|+++++.++||+ + |...+|+.-++=|||||++++
T Consensus 55 ~~~~~sfD~v~~~~~~~~~---~-----------------------------------~~~~~l~e~~rvLk~gG~l~~ 95 (95)
T PF08241_consen 55 PFPDNSFDVVFSNSVLHHL---E-----------------------------------DPEAALREIYRVLKPGGRLVI 95 (95)
T ss_dssp SS-TT-EEEEEEESHGGGS---S-----------------------------------HHHHHHHHHHHHEEEEEEEEE
T ss_pred ccccccccccccccceeec---c-----------------------------------CHHHHHHHHHHHcCcCeEEeC
Confidence 7799999999999999997 2 233478888899999999985
|
The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B .... |
| >COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=98.43 E-value=4.6e-07 Score=85.73 Aligned_cols=166 Identities=22% Similarity=0.184 Sum_probs=102.9
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCc---ceeeec
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSK---KYFATG 139 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~---~~f~~g 139 (371)
+..+|+|+|||||--|+.+. + .+. .-+|+.-|...+..+.-=+.+.... -.|+.|
T Consensus 51 ~g~~vLDva~GTGd~a~~~~--------k-~~g-------------~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~~ 108 (238)
T COG2226 51 PGDKVLDVACGTGDMALLLA--------K-SVG-------------TGEVVGLDISESMLEVAREKLKKKGVQNVEFVVG 108 (238)
T ss_pred CCCEEEEecCCccHHHHHHH--------H-hcC-------------CceEEEEECCHHHHHHHHHHhhccCccceEEEEe
Confidence 57999999999999999887 3 221 2367888887777666555554321 235555
Q ss_pred cCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcc
Q 017439 140 VPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELV 219 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 219 (371)
. .-+=-||++|+|++.+++.||++.+++. .|+--++=||
T Consensus 109 d---Ae~LPf~D~sFD~vt~~fglrnv~d~~~--------------------------------------aL~E~~RVlK 147 (238)
T COG2226 109 D---AENLPFPDNSFDAVTISFGLRNVTDIDK--------------------------------------ALKEMYRVLK 147 (238)
T ss_pred c---hhhCCCCCCccCEEEeeehhhcCCCHHH--------------------------------------HHHHHHHhhc
Confidence 4 2333369999999999999999877665 3555667999
Q ss_pred cCceEEEEecCcCCCCCCCCCCCcchHHHHHH-HHHHHHHcCCCc--hhhh-cccCcccccCCHHHHHHHhhcCCceEEE
Q 017439 220 PGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGS-CLYDLANMGLIA--EEKV-DSFNVPMYYPFLGELMGHIKRNKNFSIE 295 (371)
Q Consensus 220 pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~-al~~mv~eGli~--~e~~-d~fn~P~Y~ps~eE~~~~i~~~g~F~I~ 295 (371)
|||++++.=+..++..+... ..+..... ++-.+. .+++ .+++ --.....-+|+.+++.+.+++.| |+.+
T Consensus 148 pgG~~~vle~~~p~~~~~~~----~~~~~~~~~v~P~~g--~~~~~~~~~y~yL~eSi~~~p~~~~l~~~~~~~g-f~~i 220 (238)
T COG2226 148 PGGRLLVLEFSKPDNPVLRK----AYILYYFKYVLPLIG--KLVAKDAEAYEYLAESIRRFPDQEELKQMIEKAG-FEEV 220 (238)
T ss_pred CCeEEEEEEcCCCCchhhHH----HHHHHHHHhHhhhhc--eeeecChHHHHHHHHHHHhCCCHHHHHHHHHhcC-ceEE
Confidence 99999888888765432111 01111111 111110 1111 1111 01122233899999999999977 8755
Q ss_pred EEE
Q 017439 296 IMN 298 (371)
Q Consensus 296 ~~e 298 (371)
..+
T Consensus 221 ~~~ 223 (238)
T COG2226 221 RYE 223 (238)
T ss_pred eeE
Confidence 533
|
|
| >PRK12335 tellurite resistance protein TehB; Provisional | Back alignment and domain information |
|---|
Probab=98.42 E-value=2.7e-06 Score=82.40 Aligned_cols=77 Identities=18% Similarity=0.300 Sum_probs=54.5
Q ss_pred CCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEecC
Q 017439 151 ESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTPT 230 (371)
Q Consensus 151 ~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~g 230 (371)
++++|+++|+.++|+++. +++..+|+.-.+-|+|||++++....
T Consensus 182 ~~~fD~I~~~~vl~~l~~------------------------------------~~~~~~l~~~~~~LkpgG~~l~v~~~ 225 (287)
T PRK12335 182 QEEYDFILSTVVLMFLNR------------------------------------ERIPAIIKNMQEHTNPGGYNLIVCAM 225 (287)
T ss_pred cCCccEEEEcchhhhCCH------------------------------------HHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 678999999999999632 34556888888999999997765533
Q ss_pred cCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcc-cccCCHHHHHHHhhcCCceEEEEEEE
Q 017439 231 IRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVP-MYYPFLGELMGHIKRNKNFSIEIMNT 299 (371)
Q Consensus 231 r~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P-~Y~ps~eE~~~~i~~~g~F~I~~~e~ 299 (371)
..+..+ ...| -+..+.+|+++.+.. |+|.+.+.
T Consensus 226 ~~~~~~---------------------------------~~~p~~~~~~~~el~~~~~~---~~i~~~~e 259 (287)
T PRK12335 226 DTEDYP---------------------------------CPMPFSFTFKEGELKDYYQD---WEIVKYNE 259 (287)
T ss_pred ccccCC---------------------------------CCCCCCcccCHHHHHHHhCC---CEEEEEec
Confidence 222110 0122 346789999999975 99888753
|
|
| >smart00828 PKS_MT Methyltransferase in polyketide synthase (PKS) enzymes | Back alignment and domain information |
|---|
Probab=98.41 E-value=1.9e-06 Score=79.72 Aligned_cols=81 Identities=11% Similarity=0.068 Sum_probs=57.9
Q ss_pred CCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEecC
Q 017439 151 ESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTPT 230 (371)
Q Consensus 151 ~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~g 230 (371)
++++|+++|..++|++.+ +..+|+.-++-|+|||++++.-..
T Consensus 65 ~~~fD~I~~~~~l~~~~~--------------------------------------~~~~l~~~~~~LkpgG~l~i~~~~ 106 (224)
T smart00828 65 PDTYDLVFGFEVIHHIKD--------------------------------------KMDLFSNISRHLKDGGHLVLADFI 106 (224)
T ss_pred CCCCCEeehHHHHHhCCC--------------------------------------HHHHHHHHHHHcCCCCEEEEEEcc
Confidence 458999999999999533 233788888999999999987653
Q ss_pred cCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEe
Q 017439 231 IRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTF 300 (371)
Q Consensus 231 r~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~ 300 (371)
.+.... . . .-..+.|.++.+|+.+.+++.| |++...+.+
T Consensus 107 ~~~~~~----------------~---------~-----~~~~~~~~~s~~~~~~~l~~~G-f~~~~~~~~ 145 (224)
T smart00828 107 ANLLSA----------------I---------E-----HEETTSYLVTREEWAELLARNN-LRVVEGVDA 145 (224)
T ss_pred cccCcc----------------c---------c-----ccccccccCCHHHHHHHHHHCC-CeEEEeEEC
Confidence 221100 0 0 0113456899999999999876 999888766
|
|
| >PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities [] | Back alignment and domain information |
|---|
Probab=98.40 E-value=9e-07 Score=83.54 Aligned_cols=167 Identities=19% Similarity=0.205 Sum_probs=66.8
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC---Ccceeee
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL---SKKYFAT 138 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~---~~~~f~~ 138 (371)
....+|+|+|||+|-.|+.+. + +. .| ..+|+..|...+--..-=+.+.. .+--|+.
T Consensus 46 ~~g~~vLDv~~GtG~~~~~l~--------~-~~---------~~---~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~ 104 (233)
T PF01209_consen 46 RPGDRVLDVACGTGDVTRELA--------R-RV---------GP---NGKVVGVDISPGMLEVARKKLKREGLQNIEFVQ 104 (233)
T ss_dssp -S--EEEEET-TTSHHHHHHG--------G-GS---------S------EEEEEES-HHHHHHHHHHHHHTT--SEEEEE
T ss_pred CCCCEEEEeCCChHHHHHHHH--------H-HC---------CC---ccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEE
Confidence 345799999999999888776 3 22 12 34688888776663333222221 1223666
Q ss_pred ccCCCccccc-CCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 139 GVPGSFHGRL-FPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 139 gvpgSFy~rL-fP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
|. -+.| ||++|+|.+++++.||-+.+.+ ..|+.-.+=
T Consensus 105 ~d----a~~lp~~d~sfD~v~~~fglrn~~d~~--------------------------------------~~l~E~~RV 142 (233)
T PF01209_consen 105 GD----AEDLPFPDNSFDAVTCSFGLRNFPDRE--------------------------------------RALREMYRV 142 (233)
T ss_dssp -B----TTB--S-TT-EEEEEEES-GGG-SSHH--------------------------------------HHHHHHHHH
T ss_pred cC----HHHhcCCCCceeEEEHHhhHHhhCCHH--------------------------------------HHHHHHHHH
Confidence 66 4444 6999999999999999854422 246666689
Q ss_pred cccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhccc----CcccccCCHHHHHHHhhcCCceE
Q 017439 218 LVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSF----NVPMYYPFLGELMGHIKRNKNFS 293 (371)
Q Consensus 218 L~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f----n~P~Y~ps~eE~~~~i~~~g~F~ 293 (371)
|||||++++.=.++++.... ...|...-..+.=++ -.+++.+ .+.+ ..-.-+|+.+|+.+.+++.| |+
T Consensus 143 LkPGG~l~ile~~~p~~~~~-----~~~~~~y~~~ilP~~-g~l~~~~-~~~Y~yL~~Si~~f~~~~~~~~~l~~~G-f~ 214 (233)
T PF01209_consen 143 LKPGGRLVILEFSKPRNPLL-----RALYKFYFKYILPLI-GRLLSGD-REAYRYLPESIRRFPSPEELKELLEEAG-FK 214 (233)
T ss_dssp EEEEEEEEEEEEEB-SSHHH-----HHHHHH-------------------------------------------------
T ss_pred cCCCeEEEEeeccCCCCchh-----hceeeeeeccccccc-ccccccc-cccccccccccccccccccccccccccc-cc
Confidence 99999999888887754210 001111111000010 1222222 1111 11123789999999999987 88
Q ss_pred EEEEEE
Q 017439 294 IEIMNT 299 (371)
Q Consensus 294 I~~~e~ 299 (371)
..+.+.
T Consensus 215 ~v~~~~ 220 (233)
T PF01209_consen 215 NVEYRP 220 (233)
T ss_dssp ------
T ss_pred cccccc
Confidence 655443
|
Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C. |
| >PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=98.39 E-value=2e-06 Score=79.60 Aligned_cols=164 Identities=19% Similarity=0.145 Sum_probs=92.6
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC---Cc-ceeeec
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL---SK-KYFATG 139 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~---~~-~~f~~g 139 (371)
..+|+|+|||+|..+..+. . .+. + ..+++..|+..+-....=+.+.. .. -.|..
T Consensus 52 ~~~vldiG~G~G~~~~~l~--------~-~~~---------~---~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~- 109 (239)
T PRK00216 52 GDKVLDLACGTGDLAIALA--------K-AVG---------K---TGEVVGLDFSEGMLAVGREKLRDLGLSGNVEFVQ- 109 (239)
T ss_pred CCeEEEeCCCCCHHHHHHH--------H-HcC---------C---CCeEEEEeCCHHHHHHHHHhhcccccccCeEEEe-
Confidence 4799999999999888776 2 211 0 23577777755432222121111 11 12222
Q ss_pred cCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcc
Q 017439 140 VPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELV 219 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 219 (371)
+++.+..++++++|++++++.+|++++.+ .+|+...+-|+
T Consensus 110 --~d~~~~~~~~~~~D~I~~~~~l~~~~~~~--------------------------------------~~l~~~~~~L~ 149 (239)
T PRK00216 110 --GDAEALPFPDNSFDAVTIAFGLRNVPDID--------------------------------------KALREMYRVLK 149 (239)
T ss_pred --cccccCCCCCCCccEEEEecccccCCCHH--------------------------------------HHHHHHHHhcc
Confidence 23444446778999999999999865422 25777778999
Q ss_pred cCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHH--------HHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCc
Q 017439 220 PGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLY--------DLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKN 291 (371)
Q Consensus 220 pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~--------~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~ 291 (371)
|||++++.-...++.. .+..+.+.+. .+........+.+. +.-..+++.+|++.++++.|
T Consensus 150 ~gG~li~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~aG- 217 (239)
T PRK00216 150 PGGRLVILEFSKPTNP---------PLKKAYDFYLFKVLPLIGKLISKNAEAYSYLA--ESIRAFPDQEELAAMLEEAG- 217 (239)
T ss_pred CCcEEEEEEecCCCch---------HHHHHHHHHHHhhhHHHHHHHcCCcHHHHHHH--HHHHhCCCHHHHHHHHHhCC-
Confidence 9999988765443221 0112211111 11111110000000 00013579999999999987
Q ss_pred eEEEEEEEee
Q 017439 292 FSIEIMNTFT 301 (371)
Q Consensus 292 F~I~~~e~~~ 301 (371)
|++.+...+.
T Consensus 218 f~~~~~~~~~ 227 (239)
T PRK00216 218 FERVRYRNLT 227 (239)
T ss_pred Cceeeeeeee
Confidence 9887777653
|
|
| >TIGR01934 MenG_MenH_UbiE ubiquinone/menaquinone biosynthesis methyltransferases | Back alignment and domain information |
|---|
Probab=98.33 E-value=7.1e-06 Score=75.02 Aligned_cols=166 Identities=18% Similarity=0.187 Sum_probs=93.1
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC-CCcceeeeccC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP-LSKKYFATGVP 141 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~-~~~~~f~~gvp 141 (371)
...+|+|+|||+|..+..+. + ++. . ..+++.-|....-....=+.++ ..+--|..
T Consensus 39 ~~~~vldiG~G~G~~~~~~~--------~-~~~--------~----~~~~~~iD~~~~~~~~~~~~~~~~~~i~~~~--- 94 (223)
T TIGR01934 39 KGQKVLDVACGTGDLAIELA--------K-SAP--------D----RGKVTGVDFSSEMLEVAKKKSELPLNIEFIQ--- 94 (223)
T ss_pred CCCeEEEeCCCCChhHHHHH--------H-hcC--------C----CceEEEEECCHHHHHHHHHHhccCCCceEEe---
Confidence 45799999999999888766 2 211 0 1356677764322222211111 11112222
Q ss_pred CCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccC
Q 017439 142 GSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPG 221 (371)
Q Consensus 142 gSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 221 (371)
+.+.+-.++++++|+++++..+|+... ...+|+.-.+.|+||
T Consensus 95 ~d~~~~~~~~~~~D~i~~~~~~~~~~~--------------------------------------~~~~l~~~~~~L~~g 136 (223)
T TIGR01934 95 ADAEALPFEDNSFDAVTIAFGLRNVTD--------------------------------------IQKALREMYRVLKPG 136 (223)
T ss_pred cchhcCCCCCCcEEEEEEeeeeCCccc--------------------------------------HHHHHHHHHHHcCCC
Confidence 334444467889999999999998543 123688888999999
Q ss_pred ceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHH-HHH--cCCCchhhhcccCc----ccccCCHHHHHHHhhcCCceEE
Q 017439 222 GLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYD-LAN--MGLIAEEKVDSFNV----PMYYPFLGELMGHIKRNKNFSI 294 (371)
Q Consensus 222 G~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~-mv~--eGli~~e~~d~fn~----P~Y~ps~eE~~~~i~~~g~F~I 294 (371)
|++++.-....... .+..+.+.+.. |.. .+.... ..+.+.. ..-+++.+|++.++++.| |++
T Consensus 137 G~l~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~aG-f~~ 205 (223)
T TIGR01934 137 GRLVILEFSKPANA---------LLKKFYKFYLKNVLPSIGGLISK-NAEAYTYLPESIRAFPSQEELAAMLKEAG-FEE 205 (223)
T ss_pred cEEEEEEecCCCch---------hhHHHHHHHHHHhhhhhhhhhcC-CchhhHHHHHHHHhCCCHHHHHHHHHHcC-Ccc
Confidence 99997654332221 12222222221 110 011110 0111110 112578999999999987 998
Q ss_pred EEEEEee
Q 017439 295 EIMNTFT 301 (371)
Q Consensus 295 ~~~e~~~ 301 (371)
...+...
T Consensus 206 ~~~~~~~ 212 (223)
T TIGR01934 206 VRYRSLT 212 (223)
T ss_pred ceeeeee
Confidence 8877663
|
Note that a number of non-orthologous genes which are members of pfam03737 have been erroneously annotated as MenG methyltransferases. |
| >PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4) | Back alignment and domain information |
|---|
Probab=98.31 E-value=9.4e-05 Score=71.52 Aligned_cols=91 Identities=22% Similarity=0.274 Sum_probs=53.4
Q ss_pred hhHHHHHHHHHhhcccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCccc-ccCCHHHHH
Q 017439 205 NDIESFLNARAQELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPM-YYPFLGELM 283 (371)
Q Consensus 205 ~D~~~FL~~Ra~EL~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~-Y~ps~eE~~ 283 (371)
+++..|++.-++-|+|||++++...+..+..... +...+.+-+..+.+|- +.|+.+|+.
T Consensus 143 ~~~~~~f~~~~~~LkpgG~~~lq~i~~~~~~~~~--------------------~~~~~~~~i~kyiFPgg~lps~~~~~ 202 (273)
T PF02353_consen 143 KNYPAFFRKISRLLKPGGRLVLQTITHRDPPYHA--------------------ERRSSSDFIRKYIFPGGYLPSLSEIL 202 (273)
T ss_dssp GGHHHHHHHHHHHSETTEEEEEEEEEE--HHHHH--------------------CTTCCCHHHHHHTSTTS---BHHHHH
T ss_pred hHHHHHHHHHHHhcCCCcEEEEEecccccccchh--------------------hcCCCceEEEEeeCCCCCCCCHHHHH
Confidence 5677799999999999999999987765431100 0000001123333454 568999999
Q ss_pred HHhhcCCceEEEEEEEeecCcccccccHHHHHHhHHHhhhhhh
Q 017439 284 GHIKRNKNFSIEIMNTFTHPLVHMVYSAEFWASLSRAAFGGLV 326 (371)
Q Consensus 284 ~~i~~~g~F~I~~~e~~~~p~~~~~~~~~~~a~~iRa~~~~~l 326 (371)
..+++.| |+|++.+.+. ..++.++|.|.+.+.
T Consensus 203 ~~~~~~~-l~v~~~~~~~----------~hY~~Tl~~W~~~f~ 234 (273)
T PF02353_consen 203 RAAEDAG-LEVEDVENLG----------RHYARTLRAWRENFD 234 (273)
T ss_dssp HHHHHTT--EEEEEEE-H----------HHHHHHHHHHHHHHH
T ss_pred HHHhcCC-EEEEEEEEcC----------cCHHHHHHHHHHHHH
Confidence 9888765 9999887652 334555555555544
|
All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: |
| >PLN02490 MPBQ/MSBQ methyltransferase | Back alignment and domain information |
|---|
Probab=98.31 E-value=3.6e-06 Score=83.67 Aligned_cols=146 Identities=18% Similarity=0.208 Sum_probs=87.4
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPG 142 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpg 142 (371)
...+|+|+|||+|..++.+. + ++ | ..+++..|+..+--...-+..+..+--+. .|
T Consensus 113 ~~~~VLDLGcGtG~~~l~La--------~-~~----------~---~~~VtgVD~S~~mL~~A~~k~~~~~i~~i---~g 167 (340)
T PLN02490 113 RNLKVVDVGGGTGFTTLGIV--------K-HV----------D---AKNVTILDQSPHQLAKAKQKEPLKECKII---EG 167 (340)
T ss_pred CCCEEEEEecCCcHHHHHHH--------H-HC----------C---CCEEEEEECCHHHHHHHHHhhhccCCeEE---ec
Confidence 34799999999999887766 2 11 1 22577777754432222111111111222 23
Q ss_pred CcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCc
Q 017439 143 SFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGG 222 (371)
Q Consensus 143 SFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 222 (371)
+..+--+|++++|+++++.++|++.+. ...|+.-.+-|+|||
T Consensus 168 D~e~lp~~~~sFDvVIs~~~L~~~~d~--------------------------------------~~~L~e~~rvLkPGG 209 (340)
T PLN02490 168 DAEDLPFPTDYADRYVSAGSIEYWPDP--------------------------------------QRGIKEAYRVLKIGG 209 (340)
T ss_pred cHHhCCCCCCceeEEEEcChhhhCCCH--------------------------------------HHHHHHHHHhcCCCc
Confidence 333334678999999999999984321 124777778999999
Q ss_pred eEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEee
Q 017439 223 LLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFT 301 (371)
Q Consensus 223 ~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~~ 301 (371)
++++.-....+ .| +...+.+ ....+++.+|+.+.+++.| |+...++.+.
T Consensus 210 ~LvIi~~~~p~-----------~~--~~r~~~~----------------~~~~~~t~eEl~~lL~~aG-F~~V~i~~i~ 258 (340)
T PLN02490 210 KACLIGPVHPT-----------FW--LSRFFAD----------------VWMLFPKEEEYIEWFTKAG-FKDVKLKRIG 258 (340)
T ss_pred EEEEEEecCcc-----------hh--HHHHhhh----------------hhccCCCHHHHHHHHHHCC-CeEEEEEEcC
Confidence 99876322111 00 0100110 0112579999999999976 9988877763
|
|
| >PF03848 TehB: Tellurite resistance protein TehB; InterPro: IPR015985 Tellurite resistance protein TehB is part of a tellurite-reducing operon tehA and tehB | Back alignment and domain information |
|---|
Probab=98.24 E-value=1.2e-05 Score=73.84 Aligned_cols=129 Identities=18% Similarity=0.196 Sum_probs=78.1
Q ss_pred CceEEeeecCCCCcccHHHHH------------HHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC
Q 017439 63 STFKIADLGCSTGPNTFIAMQ------------NIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP 130 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~------------~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~ 130 (371)
++-+++|+|||.|+||+-+.+ ..|+.+.+ .-...+ ++|+...-|+..-+
T Consensus 30 ~~g~~LDlgcG~GRNalyLA~~G~~VtAvD~s~~al~~l~~-~a~~~~---------l~i~~~~~Dl~~~~--------- 90 (192)
T PF03848_consen 30 KPGKALDLGCGEGRNALYLASQGFDVTAVDISPVALEKLQR-LAEEEG---------LDIRTRVADLNDFD--------- 90 (192)
T ss_dssp -SSEEEEES-TTSHHHHHHHHTT-EEEEEESSHHHHHHHHH-HHHHTT----------TEEEEE-BGCCBS---------
T ss_pred CCCcEEEcCCCCcHHHHHHHHCCCeEEEEECCHHHHHHHHH-HHhhcC---------ceeEEEEecchhcc---------
Confidence 357999999999999999986 34554444 211111 24677777764322
Q ss_pred CCcceeeeccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHH
Q 017439 131 LSKKYFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESF 210 (371)
Q Consensus 131 ~~~~~f~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~F 210 (371)
+++..|+++|...+|.|.. +.+..+
T Consensus 91 -------------------~~~~yD~I~st~v~~fL~~------------------------------------~~~~~i 115 (192)
T PF03848_consen 91 -------------------FPEEYDFIVSTVVFMFLQR------------------------------------ELRPQI 115 (192)
T ss_dssp --------------------TTTEEEEEEESSGGGS-G------------------------------------GGHHHH
T ss_pred -------------------ccCCcCEEEEEEEeccCCH------------------------------------HHHHHH
Confidence 2356899999999999653 123346
Q ss_pred HHHHHhhcccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCC
Q 017439 211 LNARAQELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNK 290 (371)
Q Consensus 211 L~~Ra~EL~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g 290 (371)
++...+.++|||.+++...-..+..+. ..+ |-+...++|++.....
T Consensus 116 ~~~m~~~~~pGG~~li~~~~~~~d~p~-------------------------------~~~-~~f~~~~~EL~~~y~d-- 161 (192)
T PF03848_consen 116 IENMKAATKPGGYNLIVTFMETPDYPC-------------------------------PSP-FPFLLKPGELREYYAD-- 161 (192)
T ss_dssp HHHHHHTEEEEEEEEEEEEB--SSS---------------------------------SS---S--B-TTHHHHHTTT--
T ss_pred HHHHHhhcCCcEEEEEEEecccCCCCC-------------------------------CCC-CCcccCHHHHHHHhCC--
Confidence 777889999999988855432221110 012 2334578999999884
Q ss_pred ceEEEEEEEe
Q 017439 291 NFSIEIMNTF 300 (371)
Q Consensus 291 ~F~I~~~e~~ 300 (371)
|+|.+.+..
T Consensus 162 -W~il~y~E~ 170 (192)
T PF03848_consen 162 -WEILKYNED 170 (192)
T ss_dssp -SEEEEEEEE
T ss_pred -CeEEEEEcc
Confidence 998877553
|
When present in high copy number, TehB is responsible for potassium tellurite resistance, probably by increasing the reduction rate of tellurite to metallic tellurium within the bacterium. TehB is a cytoplasmic protein which possesses three conserved motifs (I, II, and III) found in S-adenosyl-L-methionine (SAM)-dependent non-nucleic acid methyltransferases []. Conformational changes in TehB are observed upon binding of both tellurite and SAM, suggesting that TehB utilises a methyltransferase activity in the detoxification of tellurite. This entry represents the methyltransferase domain found in all TehB proteins.; PDB: 2KW5_A 3MER_B 3M70_A 2I6G_A 4DQ0_D 2XVA_B 2XVM_A. |
| >PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A | Back alignment and domain information |
|---|
Probab=98.22 E-value=8.1e-06 Score=66.76 Aligned_cols=95 Identities=20% Similarity=0.297 Sum_probs=63.8
Q ss_pred ceEEeeecCCCCcccHHHHH--------------HHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC
Q 017439 64 TFKIADLGCSTGPNTFIAMQ--------------NIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV 129 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~--------------~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l 129 (371)
.-+|+|+|||+|..++.+.+ ..++..++ +....+ . .+ .+++...|+ ..++.
T Consensus 2 ~~~vLDlGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~-~~~~~~--~--~~---~i~~~~~d~-~~~~~------ 66 (112)
T PF12847_consen 2 GGRVLDLGCGTGRLSIALARLFPGARVVGVDISPEMLEIARE-RAAEEG--L--SD---RITFVQGDA-EFDPD------ 66 (112)
T ss_dssp TCEEEEETTTTSHHHHHHHHHHTTSEEEEEESSHHHHHHHHH-HHHHTT--T--TT---TEEEEESCC-HGGTT------
T ss_pred CCEEEEEcCcCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHH-HHHhcC--C--CC---CeEEEECcc-ccCcc------
Confidence 35899999999999999997 55666665 542211 0 22 566777666 22211
Q ss_pred CCCcceeeeccCCCcccccCCCCceeEEEecC-CccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHH
Q 017439 130 PLSKKYFATGVPGSFHGRLFPESSLHVAHTSN-ALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIE 208 (371)
Q Consensus 130 ~~~~~~f~~gvpgSFy~rLfP~~Svd~~~Ss~-alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~ 208 (371)
....+|+++++. ++|++-.. .+..
T Consensus 67 --------------------~~~~~D~v~~~~~~~~~~~~~-----------------------------------~~~~ 91 (112)
T PF12847_consen 67 --------------------FLEPFDLVICSGFTLHFLLPL-----------------------------------DERR 91 (112)
T ss_dssp --------------------TSSCEEEEEECSGSGGGCCHH-----------------------------------HHHH
T ss_pred --------------------cCCCCCEEEECCCccccccch-----------------------------------hHHH
Confidence 112299999999 77752211 3455
Q ss_pred HHHHHHHhhcccCceEEEEe
Q 017439 209 SFLNARAQELVPGGLLLLLT 228 (371)
Q Consensus 209 ~FL~~Ra~EL~pGG~lvl~~ 228 (371)
.+|+.-.+-|+|||+|++..
T Consensus 92 ~~l~~~~~~L~pgG~lvi~~ 111 (112)
T PF12847_consen 92 RVLERIRRLLKPGGRLVINT 111 (112)
T ss_dssp HHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHhcCCCcEEEEEE
Confidence 67888889999999999874
|
... |
| >KOG2940 consensus Predicted methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.19 E-value=3.4e-06 Score=78.79 Aligned_cols=144 Identities=22% Similarity=0.328 Sum_probs=94.0
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhh--------hhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcc
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELI--------KYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKK 134 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~--------~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~ 134 (371)
..-..+|+|||-|..+..+...-|+.+-.+ .|++ ++ .| +++...+.-|-..-|
T Consensus 72 ~fp~a~diGcs~G~v~rhl~~e~vekli~~DtS~~M~~s~~~---~q--dp-~i~~~~~v~DEE~Ld------------- 132 (325)
T KOG2940|consen 72 SFPTAFDIGCSLGAVKRHLRGEGVEKLIMMDTSYDMIKSCRD---AQ--DP-SIETSYFVGDEEFLD------------- 132 (325)
T ss_pred hCcceeecccchhhhhHHHHhcchhheeeeecchHHHHHhhc---cC--CC-ceEEEEEecchhccc-------------
Confidence 345789999999999988876555443110 1221 22 34 122222222322222
Q ss_pred eeeeccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHH
Q 017439 135 YFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNAR 214 (371)
Q Consensus 135 ~f~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~R 214 (371)
|-+||+|+++||-++||..+.|.. +...
T Consensus 133 --------------f~ens~DLiisSlslHW~NdLPg~--------------------------------------m~~c 160 (325)
T KOG2940|consen 133 --------------FKENSVDLIISSLSLHWTNDLPGS--------------------------------------MIQC 160 (325)
T ss_pred --------------ccccchhhhhhhhhhhhhccCchH--------------------------------------HHHH
Confidence 578999999999999999999963 3334
Q ss_pred HhhcccCceEEEEecCcCCCCCCCCCCCcchHHH-HHHHHHHHHHcCCCchhhhcccCcccccC--CHHHHHHHhhcCCc
Q 017439 215 AQELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDY-LGSCLYDLANMGLIAEEKVDSFNVPMYYP--FLGELMGHIKRNKN 291 (371)
Q Consensus 215 a~EL~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~-l~~al~~mv~eGli~~e~~d~fn~P~Y~p--s~eE~~~~i~~~g~ 291 (371)
...|||.|.++..++|-+. .+++ .+--|.+|..+|-|++ -..| ...++-.++.+.|
T Consensus 161 k~~lKPDg~FiasmlggdT-----------LyELR~slqLAelER~GGiSp---------hiSPf~qvrDiG~LL~rAG- 219 (325)
T KOG2940|consen 161 KLALKPDGLFIASMLGGDT-----------LYELRCSLQLAELEREGGISP---------HISPFTQVRDIGNLLTRAG- 219 (325)
T ss_pred HHhcCCCccchhHHhcccc-----------HHHHHHHhhHHHHHhccCCCC---------CcChhhhhhhhhhHHhhcC-
Confidence 5789999999999988643 3443 4455779999999863 3333 4556777788876
Q ss_pred eEEEEEE
Q 017439 292 FSIEIMN 298 (371)
Q Consensus 292 F~I~~~e 298 (371)
|....+.
T Consensus 220 F~m~tvD 226 (325)
T KOG2940|consen 220 FSMLTVD 226 (325)
T ss_pred cccceec
Confidence 7755443
|
|
| >PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=98.17 E-value=1.8e-05 Score=75.70 Aligned_cols=151 Identities=15% Similarity=0.145 Sum_probs=83.5
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhc---CCCCcceeeec
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKS---VPLSKKYFATG 139 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~---l~~~~~~f~~g 139 (371)
..-+|+|+|||+|..++.+. . .+. + .-+|+.-|.-.+-....=+. ..-.+-.|..+
T Consensus 77 ~g~~VLDiG~G~G~~~~~~a--------~-~~g---------~---~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~~~ 135 (272)
T PRK11873 77 PGETVLDLGSGGGFDCFLAA--------R-RVG---------P---TGKVIGVDMTPEMLAKARANARKAGYTNVEFRLG 135 (272)
T ss_pred CCCEEEEeCCCCCHHHHHHH--------H-HhC---------C---CCEEEEECCCHHHHHHHHHHHHHcCCCCEEEEEc
Confidence 34699999999998776554 2 111 1 22567777644332211111 11111123333
Q ss_pred cCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcc
Q 017439 140 VPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELV 219 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 219 (371)
.+..--+|++++|+++|+.++||....+ ..|+.-.+-|+
T Consensus 136 ---d~~~l~~~~~~fD~Vi~~~v~~~~~d~~--------------------------------------~~l~~~~r~Lk 174 (272)
T PRK11873 136 ---EIEALPVADNSVDVIISNCVINLSPDKE--------------------------------------RVFKEAFRVLK 174 (272)
T ss_pred ---chhhCCCCCCceeEEEEcCcccCCCCHH--------------------------------------HHHHHHHHHcC
Confidence 3322235788999999999999942211 13555567899
Q ss_pred cCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEE
Q 017439 220 PGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNT 299 (371)
Q Consensus 220 pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~ 299 (371)
|||++++.-....... .+.+...+. +.. |.+ ....+.+|+.+++++.| |....+..
T Consensus 175 pGG~l~i~~~~~~~~~----------~~~~~~~~~-~~~-~~~-----------~~~~~~~e~~~~l~~aG-f~~v~i~~ 230 (272)
T PRK11873 175 PGGRFAISDVVLRGEL----------PEEIRNDAE-LYA-GCV-----------AGALQEEEYLAMLAEAG-FVDITIQP 230 (272)
T ss_pred CCcEEEEEEeeccCCC----------CHHHHHhHH-HHh-ccc-----------cCCCCHHHHHHHHHHCC-CCceEEEe
Confidence 9999998754322211 122222221 111 111 12457899999999877 87766543
|
|
| >PF08242 Methyltransf_12: Methyltransferase domain; InterPro: IPR013217 Methyl transfer from the ubiquitous donor S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals | Back alignment and domain information |
|---|
Probab=98.17 E-value=5.3e-06 Score=66.83 Aligned_cols=96 Identities=24% Similarity=0.211 Sum_probs=48.3
Q ss_pred eeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CCCcceeeeccCCCc
Q 017439 68 ADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PLSKKYFATGVPGSF 144 (371)
Q Consensus 68 aDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~~~~~f~~gvpgSF 144 (371)
+|+|||+|..+..++ + ++ | ..+++..|.-..--...=+.+ .....-.........
T Consensus 1 LdiGcG~G~~~~~l~--------~-~~----------~---~~~~~~~D~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~ 58 (99)
T PF08242_consen 1 LDIGCGTGRLLRALL--------E-EL----------P---DARYTGVDISPSMLERARERLAELGNDNFERLRFDVLDL 58 (99)
T ss_dssp -EESTTTS-TTTTHH--------H-HC--------------EEEEEEEESSSSTTSTTCCCHHHCT---EEEEE--SSS-
T ss_pred CEeCccChHHHHHHH--------H-hC----------C---CCEEEEEECCHHHHHHHHHHhhhcCCcceeEEEeecCCh
Confidence 699999999999888 3 22 2 457778887766542111111 111112222222222
Q ss_pred ccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceE
Q 017439 145 HGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLL 224 (371)
Q Consensus 145 y~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~l 224 (371)
.... +++++|+|+++.+|||+ + |+..+|+.-++-|+|||+|
T Consensus 59 ~~~~-~~~~fD~V~~~~vl~~l---~-----------------------------------~~~~~l~~~~~~L~pgG~l 99 (99)
T PF08242_consen 59 FDYD-PPESFDLVVASNVLHHL---E-----------------------------------DIEAVLRNIYRLLKPGGIL 99 (99)
T ss_dssp --CC-C----SEEEEE-TTS-----S------------------------------------HHHHHHHHTTT-TSS-EE
T ss_pred hhcc-cccccceehhhhhHhhh---h-----------------------------------hHHHHHHHHHHHcCCCCCC
Confidence 2221 22799999999999997 2 2234788888999999986
|
The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] Fatty acid synthase (2.3.1.85 from EC), a biosynthetic enzyme catalysing the formation of long-chain fatty acids Glycine N-methyltransferase (2.1.1.20 from EC) which catalyses the SAM-dependent methylation of glycine to form sarcosine and may play a role in regulating the methylation potential of the cell [] Enniatin synthetase, involved in non-ribosomal biosynthesis of cyclohexadepsipeptidase, enniatin [] Histamine N-methyltransferase (2.1.1.8 from EC), a SAM-dependent histamine-inactivating enzyme [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ].; PDB: 2VZ8_A 2VZ9_A. |
| >PF13847 Methyltransf_31: Methyltransferase domain; PDB: 3T0I_B 3SVZ_B 3SXJ_A 3F4K_A 3GU3_B 2GH1_A 1R8Y_E 1R8X_B 2B3T_A 1T43_A | Back alignment and domain information |
|---|
Probab=98.07 E-value=9.2e-06 Score=70.84 Aligned_cols=107 Identities=24% Similarity=0.318 Sum_probs=69.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCc---hhhhhhcCCCCcceeeec
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNND---FNTLFKSVPLSKKYFATG 139 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~ND---Fn~lF~~l~~~~~~f~~g 139 (371)
+..+|+|+|||+|..++.+.. +. .| ..+++.-|+-..- -+..++.+...+--|..+
T Consensus 3 ~~~~iLDlGcG~G~~~~~l~~---------~~---------~~---~~~i~gvD~s~~~i~~a~~~~~~~~~~ni~~~~~ 61 (152)
T PF13847_consen 3 SNKKILDLGCGTGRLLIQLAK---------EL---------NP---GAKIIGVDISEEMIEYAKKRAKELGLDNIEFIQG 61 (152)
T ss_dssp TTSEEEEET-TTSHHHHHHHH---------HS---------TT---TSEEEEEESSHHHHHHHHHHHHHTTSTTEEEEES
T ss_pred CCCEEEEecCcCcHHHHHHHH---------hc---------CC---CCEEEEEECcHHHHHHhhcccccccccccceEEe
Confidence 468999999999999988772 11 11 2357777776533 233333443333345555
Q ss_pred cCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcc
Q 017439 140 VPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELV 219 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 219 (371)
.=-+ ..+.++ +++|+++++.++||+.. ...+|+.-.+-|+
T Consensus 62 d~~~-l~~~~~-~~~D~I~~~~~l~~~~~--------------------------------------~~~~l~~~~~~lk 101 (152)
T PF13847_consen 62 DIED-LPQELE-EKFDIIISNGVLHHFPD--------------------------------------PEKVLKNIIRLLK 101 (152)
T ss_dssp BTTC-GCGCSS-TTEEEEEEESTGGGTSH--------------------------------------HHHHHHHHHHHEE
T ss_pred ehhc-cccccC-CCeeEEEEcCchhhccC--------------------------------------HHHHHHHHHHHcC
Confidence 5333 222244 89999999999999443 2235777778999
Q ss_pred cCceEEEEecC
Q 017439 220 PGGLLLLLTPT 230 (371)
Q Consensus 220 pGG~lvl~~~g 230 (371)
+||++++....
T Consensus 102 ~~G~~i~~~~~ 112 (152)
T PF13847_consen 102 PGGILIISDPN 112 (152)
T ss_dssp EEEEEEEEEEE
T ss_pred CCcEEEEEECC
Confidence 99999998876
|
... |
| >TIGR01983 UbiG ubiquinone biosynthesis O-methyltransferase | Back alignment and domain information |
|---|
Probab=98.02 E-value=4.6e-05 Score=70.31 Aligned_cols=95 Identities=17% Similarity=0.229 Sum_probs=55.5
Q ss_pred CCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEecC
Q 017439 151 ESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTPT 230 (371)
Q Consensus 151 ~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~g 230 (371)
++++|+++++.++|+... ...+|+.-.+-|+|||.+++....
T Consensus 110 ~~~~D~i~~~~~l~~~~~--------------------------------------~~~~l~~~~~~L~~gG~l~i~~~~ 151 (224)
T TIGR01983 110 AKSFDVVTCMEVLEHVPD--------------------------------------PQAFIRACAQLLKPGGILFFSTIN 151 (224)
T ss_pred CCCccEEEehhHHHhCCC--------------------------------------HHHHHHHHHHhcCCCcEEEEEecC
Confidence 478999999999888432 123677777889999999887654
Q ss_pred cCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEe
Q 017439 231 IRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTF 300 (371)
Q Consensus 231 r~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~ 300 (371)
++.. ......+. .++. .+..... ......+.+.+++.+++++.| |+|..+..+
T Consensus 152 ~~~~--------~~~~~~~~---~~~~-~~~~~~~----~~~~~~~~~~~~l~~~l~~~G-~~i~~~~~~ 204 (224)
T TIGR01983 152 RTPK--------SYLLAIVG---AEYI-LRIVPKG----THDWEKFIKPSELTSWLESAG-LRVKDVKGL 204 (224)
T ss_pred CCch--------HHHHHHHh---hhhh-hhcCCCC----cCChhhcCCHHHHHHHHHHcC-CeeeeeeeE
Confidence 3211 00011110 0111 1111110 001112558899999999876 999877754
|
This model represents an O-methyltransferase believed to act at two points in the ubiquinone biosynthetic pathway in bacteria (UbiG) and fungi (COQ3). A separate methylase (MenG/UbiE) catalyzes the single C-methylation step. The most commonly used names for genes in this family do not indicate whether this gene is an O-methyl, or C-methyl transferase. |
| >TIGR02021 BchM-ChlM magnesium protoporphyrin O-methyltransferase | Back alignment and domain information |
|---|
Probab=98.00 E-value=0.00017 Score=66.70 Aligned_cols=31 Identities=10% Similarity=0.074 Sum_probs=25.6
Q ss_pred CcccccCCHHHHHHHhhcCCceEEEEEEEeec
Q 017439 271 NVPMYYPFLGELMGHIKRNKNFSIEIMNTFTH 302 (371)
Q Consensus 271 n~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~~~ 302 (371)
..++++++++|+.+++++.| |++...+....
T Consensus 179 ~~~~~~~~~~~~~~~l~~~G-f~v~~~~~~~~ 209 (219)
T TIGR02021 179 ATSAYLHPMTDLERALGELG-WKIVREGLVST 209 (219)
T ss_pred ccceEEecHHHHHHHHHHcC-ceeeeeecccc
Confidence 34678899999999999887 99998886643
|
This model represents the S-adenosylmethionine-dependent O-methyltransferase responsible for methylation of magnesium protoporphyrin IX. This step is essentiasl for the biosynthesis of both chlorophyll and bacteriochlorophyll. This model encompasses two closely related clades, from cyanobacteria (and plants) where it is called ChlM and other photosynthetic bacteria where it is known as BchM. |
| >PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=98.00 E-value=4.1e-05 Score=70.48 Aligned_cols=161 Identities=17% Similarity=0.141 Sum_probs=90.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccccccCCCCCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCccee
Q 017439 31 IYQEAIVNGSKGMIAAGIRKTLDLKSLRLDTSSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEF 110 (371)
Q Consensus 31 ~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei 110 (371)
.+|+.+.....|.+-...-+... .+ .....+|+|+|||+|..+..+.. + .| ..
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~VLDiGcGtG~~~~~la~---------~----------~p---~~ 65 (202)
T PRK00121 13 KGQQRAIEELWPRLSPAPLDWAE--LF---GNDAPIHLEIGFGKGEFLVEMAK---------A----------NP---DI 65 (202)
T ss_pred cchhhhhcccchhhcCCCCCHHH--Hc---CCCCCeEEEEccCCCHHHHHHHH---------H----------CC---Cc
Confidence 45666666666665322211111 11 23567999999999999998762 1 11 22
Q ss_pred EEEecCCCcCchhhhhhcC---CCCcceeeeccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCcee
Q 017439 111 QVFFNDHSNNDFNTLFKSV---PLSKKYFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHIL 187 (371)
Q Consensus 111 ~v~~nDlp~NDFn~lF~~l---~~~~~~f~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~ 187 (371)
+|+..|.-..--..+-+.+ ...+-.|..+..-..+.+.+|++++|.++++++.+|..... .. .
T Consensus 66 ~v~gVD~s~~~i~~a~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~D~V~~~~~~p~~~~~~-~~----------~--- 131 (202)
T PRK00121 66 NFIGIEVHEPGVGKALKKIEEEGLTNLRLLCGDAVEVLLDMFPDGSLDRIYLNFPDPWPKKRH-HK----------R--- 131 (202)
T ss_pred cEEEEEechHHHHHHHHHHHHcCCCCEEEEecCHHHHHHHHcCccccceEEEECCCCCCCccc-cc----------c---
Confidence 4555555443333222221 11111233332101133457889999999999888855311 00 0
Q ss_pred ecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCc
Q 017439 188 CSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIA 263 (371)
Q Consensus 188 ~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~ 263 (371)
..+...||+.-++-|+|||.+++..... +.+...+..|...|+-.
T Consensus 132 ----------------~~~~~~~l~~i~~~LkpgG~l~i~~~~~---------------~~~~~~~~~~~~~g~~~ 176 (202)
T PRK00121 132 ----------------RLVQPEFLALYARKLKPGGEIHFATDWE---------------GYAEYMLEVLSAEGGFL 176 (202)
T ss_pred ----------------ccCCHHHHHHHHHHcCCCCEEEEEcCCH---------------HHHHHHHHHHHhCcccc
Confidence 0123457888889999999999876322 34555666666777643
|
|
| >PRK11088 rrmA 23S rRNA methyltransferase A; Provisional | Back alignment and domain information |
|---|
Probab=97.99 E-value=0.00013 Score=69.94 Aligned_cols=76 Identities=22% Similarity=0.251 Sum_probs=43.0
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPG 142 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpg 142 (371)
...+|+|+|||+|..+..+.. .... .. ..+++..|+-.+--...=+..+ +--|..+.
T Consensus 85 ~~~~vLDiGcG~G~~~~~l~~---------~~~~-------~~---~~~v~giD~s~~~l~~A~~~~~--~~~~~~~d-- 141 (272)
T PRK11088 85 KATALLDIGCGEGYYTHALAD---------ALPE-------IT---TMQLFGLDISKVAIKYAAKRYP--QVTFCVAS-- 141 (272)
T ss_pred CCCeEEEECCcCCHHHHHHHH---------hccc-------cc---CCeEEEECCCHHHHHHHHHhCC--CCeEEEee--
Confidence 346899999999998887762 1111 10 1257777775543322212211 11233332
Q ss_pred CcccccCCCCceeEEEecCC
Q 017439 143 SFHGRLFPESSLHVAHTSNA 162 (371)
Q Consensus 143 SFy~rLfP~~Svd~~~Ss~a 162 (371)
..+--||++|+|+++|..+
T Consensus 142 -~~~lp~~~~sfD~I~~~~~ 160 (272)
T PRK11088 142 -SHRLPFADQSLDAIIRIYA 160 (272)
T ss_pred -cccCCCcCCceeEEEEecC
Confidence 2222367899999998654
|
|
| >COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.97 E-value=0.0011 Score=64.27 Aligned_cols=71 Identities=20% Similarity=0.273 Sum_probs=49.5
Q ss_pred hhHHHHHHHHHhhcccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcc-cccCCHHHHH
Q 017439 205 NDIESFLNARAQELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVP-MYYPFLGELM 283 (371)
Q Consensus 205 ~D~~~FL~~Ra~EL~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P-~Y~ps~eE~~ 283 (371)
+.+..|++.-.+-|+|||+|++...+....... . ...-.+.+.+| -+.||..++.
T Consensus 153 ~~~~~ff~~~~~~L~~~G~~llh~I~~~~~~~~---~---------------------~~~~i~~yiFPgG~lPs~~~i~ 208 (283)
T COG2230 153 ENYDDFFKKVYALLKPGGRMLLHSITGPDQEFR---R---------------------FPDFIDKYIFPGGELPSISEIL 208 (283)
T ss_pred ccHHHHHHHHHhhcCCCceEEEEEecCCCcccc---c---------------------chHHHHHhCCCCCcCCCHHHHH
Confidence 556679999999999999999999887654210 0 00111222233 2468999999
Q ss_pred HHhhcCCceEEEEEEEe
Q 017439 284 GHIKRNKNFSIEIMNTF 300 (371)
Q Consensus 284 ~~i~~~g~F~I~~~e~~ 300 (371)
..+++.| |.+...+.+
T Consensus 209 ~~~~~~~-~~v~~~~~~ 224 (283)
T COG2230 209 ELASEAG-FVVLDVESL 224 (283)
T ss_pred HHHHhcC-cEEehHhhh
Confidence 9988876 998877755
|
|
| >PRK06922 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.96 E-value=1.8e-05 Score=84.26 Aligned_cols=116 Identities=22% Similarity=0.172 Sum_probs=71.7
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC-C-cceeeeccC
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL-S-KKYFATGVP 141 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~-~-~~~f~~gvp 141 (371)
..+|+|+|||+|..+..+. + + .| ..+++.-|+..+-=...=+.++. . +-.+..|..
T Consensus 419 g~rVLDIGCGTG~ls~~LA--------~-~----------~P---~~kVtGIDIS~~MLe~Ararl~~~g~~ie~I~gDa 476 (677)
T PRK06922 419 GDTIVDVGAGGGVMLDMIE--------E-E----------TE---DKRIYGIDISENVIDTLKKKKQNEGRSWNVIKGDA 476 (677)
T ss_pred CCEEEEeCCCCCHHHHHHH--------H-h----------CC---CCEEEEEECCHHHHHHHHHHhhhcCCCeEEEEcch
Confidence 4699999999998776554 2 2 22 34677777776532222111211 1 112333332
Q ss_pred CCcccccCCCCceeEEEecCCcccc-CCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc
Q 017439 142 GSFHGRLFPESSLHVAHTSNALPWL-SKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP 220 (371)
Q Consensus 142 gSFy~rLfP~~Svd~~~Ss~alHWL-S~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 220 (371)
.. ....||++++|++++++++||+ +.+|..-. .++ .+|...+|+.-.+-|+|
T Consensus 477 ~d-Lp~~fedeSFDvVVsn~vLH~L~syIp~~g~-----~f~---------------------~edl~kiLreI~RVLKP 529 (677)
T PRK06922 477 IN-LSSSFEKESVDTIVYSSILHELFSYIEYEGK-----KFN---------------------HEVIKKGLQSAYEVLKP 529 (677)
T ss_pred Hh-CccccCCCCEEEEEEchHHHhhhhhcccccc-----ccc---------------------HHHHHHHHHHHHHHcCC
Confidence 22 1223788999999999999964 55552110 011 25777889999999999
Q ss_pred CceEEEEe
Q 017439 221 GGLLLLLT 228 (371)
Q Consensus 221 GG~lvl~~ 228 (371)
||++++.=
T Consensus 530 GGrLII~D 537 (677)
T PRK06922 530 GGRIIIRD 537 (677)
T ss_pred CcEEEEEe
Confidence 99999963
|
|
| >smart00138 MeTrc Methyltransferase, chemotaxis proteins | Back alignment and domain information |
|---|
Probab=97.96 E-value=6.1e-05 Score=72.37 Aligned_cols=43 Identities=30% Similarity=0.486 Sum_probs=33.4
Q ss_pred CCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEE
Q 017439 149 FPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLL 227 (371)
Q Consensus 149 fP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~ 227 (371)
+|.+++|+|+|.++|||++. | +....|+.-++-|+|||.|++.
T Consensus 199 ~~~~~fD~I~crnvl~yf~~-~-----------------------------------~~~~~l~~l~~~L~pGG~L~lg 241 (264)
T smart00138 199 PPLGDFDLIFCRNVLIYFDE-P-----------------------------------TQRKLLNRFAEALKPGGYLFLG 241 (264)
T ss_pred CccCCCCEEEechhHHhCCH-H-----------------------------------HHHHHHHHHHHHhCCCeEEEEE
Confidence 46889999999999999643 1 2233677778899999999874
|
Methylates methyl-accepting chemotaxis proteins to form gamma-glutamyl methyl ester residues. |
| >TIGR02081 metW methionine biosynthesis protein MetW | Back alignment and domain information |
|---|
Probab=97.92 E-value=3.4e-05 Score=70.19 Aligned_cols=27 Identities=7% Similarity=0.065 Sum_probs=23.5
Q ss_pred cccCCHHHHHHHhhcCCceEEEEEEEee
Q 017439 274 MYYPFLGELMGHIKRNKNFSIEIMNTFT 301 (371)
Q Consensus 274 ~Y~ps~eE~~~~i~~~g~F~I~~~e~~~ 301 (371)
..+++.+|+.+++++.| |++.....++
T Consensus 143 ~~~~s~~~~~~ll~~~G-f~v~~~~~~~ 169 (194)
T TIGR02081 143 IHFCTIADFEDLCGELN-LRILDRAAFD 169 (194)
T ss_pred cccCcHHHHHHHHHHCC-CEEEEEEEec
Confidence 45789999999999987 9999988774
|
This protein is found alongside MetX, of the enzyme that acylates homoserine as a first step toward methionine biosynthesis, in many species. It appears to act in methionine biosynthesis but is not fully characterized. |
| >TIGR02716 C20_methyl_CrtF C-20 methyltransferase BchU | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.00036 Score=68.04 Aligned_cols=151 Identities=16% Similarity=0.177 Sum_probs=86.7
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhh-cCCC---Ccceee
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFK-SVPL---SKKYFA 137 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~-~l~~---~~~~f~ 137 (371)
.+..+|+|+|||+|..++.+. + + .| ..+++.-|+|. --...+ .+.. ..+ +
T Consensus 148 ~~~~~vlDiG~G~G~~~~~~~--------~-~----------~p---~~~~~~~D~~~--~~~~a~~~~~~~gl~~r--v 201 (306)
T TIGR02716 148 DGVKKMIDVGGGIGDISAAML--------K-H----------FP---ELDSTILNLPG--AIDLVNENAAEKGVADR--M 201 (306)
T ss_pred CCCCEEEEeCCchhHHHHHHH--------H-H----------CC---CCEEEEEecHH--HHHHHHHHHHhCCccce--E
Confidence 345799999999998887776 3 2 23 45677778863 112211 1111 112 3
Q ss_pred eccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 138 TGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 138 ~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
..++|+|++.-+|+ .|+++.+..+|-. ++ ++-..+|+.-++-
T Consensus 202 ~~~~~d~~~~~~~~--~D~v~~~~~lh~~---~~---------------------------------~~~~~il~~~~~~ 243 (306)
T TIGR02716 202 RGIAVDIYKESYPE--ADAVLFCRILYSA---NE---------------------------------QLSTIMCKKAFDA 243 (306)
T ss_pred EEEecCccCCCCCC--CCEEEeEhhhhcC---Ch---------------------------------HHHHHHHHHHHHh
Confidence 34667888655565 4999988888831 21 1122367777889
Q ss_pred cccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEE
Q 017439 218 LVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIE 295 (371)
Q Consensus 218 L~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~ 295 (371)
|+|||++++.=.-.++... ..+..+...+. .-|... .+.-+++.+|+.+++++.| |+..
T Consensus 244 L~pgG~l~i~d~~~~~~~~-------~~~~~~~~~~~---~~~~~~--------~~~~~~~~~e~~~ll~~aG-f~~v 302 (306)
T TIGR02716 244 MRSGGRLLILDMVIDDPEN-------PNFDYLSHYIL---GAGMPF--------SVLGFKEQARYKEILESLG-YKDV 302 (306)
T ss_pred cCCCCEEEEEEeccCCCCC-------chhhHHHHHHH---Hccccc--------ccccCCCHHHHHHHHHHcC-CCee
Confidence 9999999887432222110 01222222221 112210 1123566899999999987 8644
|
Members of this protein family are the S-adenosylmethionine-depenedent C-20 methyltransferase BchU, part of the pathway of bacteriochlorophyll c production in photosynthetic green sulfur bacteria. The position modified by this enzyme represents the difference between bacteriochlorophylls c and d; strains lacking this protein can only produced bacteriochlorophyll d. |
| >PRK07580 Mg-protoporphyrin IX methyl transferase; Validated | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.00074 Score=62.39 Aligned_cols=32 Identities=6% Similarity=0.062 Sum_probs=25.4
Q ss_pred cccccCCHHHHHHHhhcCCceEEEEEEEeecCc
Q 017439 272 VPMYYPFLGELMGHIKRNKNFSIEIMNTFTHPL 304 (371)
Q Consensus 272 ~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~~~p~ 304 (371)
.+.+..+.+|+.+.++..| |++...+.+...+
T Consensus 188 ~~~~~~~~~~~~~~l~~~G-f~~~~~~~~~~~~ 219 (230)
T PRK07580 188 TRIYPHREKGIRRALAAAG-FKVVRTERISSGF 219 (230)
T ss_pred CCccccCHHHHHHHHHHCC-CceEeeeeccchh
Confidence 3566789999999999887 9998888765443
|
|
| >KOG3010 consensus Methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00066 Score=64.11 Aligned_cols=102 Identities=22% Similarity=0.247 Sum_probs=63.2
Q ss_pred EEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCCCcc
Q 017439 66 KIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPGSFH 145 (371)
Q Consensus 66 ~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpgSFy 145 (371)
.+.|+|||+|..++.+. . .+ + +|+..|.-...-+ +.+..+ +.-..-+|-++-
T Consensus 36 ~a~DvG~G~Gqa~~~ia--------e-~~--------------k-~VIatD~s~~mL~-~a~k~~---~~~y~~t~~~ms 87 (261)
T KOG3010|consen 36 LAWDVGTGNGQAARGIA--------E-HY--------------K-EVIATDVSEAMLK-VAKKHP---PVTYCHTPSTMS 87 (261)
T ss_pred eEEEeccCCCcchHHHH--------H-hh--------------h-hheeecCCHHHHH-HhhcCC---CcccccCCcccc
Confidence 89999999996666555 2 11 1 3455555443322 111111 111222233333
Q ss_pred ----cccC-CCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc
Q 017439 146 ----GRLF-PESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP 220 (371)
Q Consensus 146 ----~rLf-P~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 220 (371)
..|. +++|||+|.+.-|+|| =|+.+|++.-.+-|++
T Consensus 88 ~~~~v~L~g~e~SVDlI~~Aqa~HW---------------------------------------Fdle~fy~~~~rvLRk 128 (261)
T KOG3010|consen 88 SDEMVDLLGGEESVDLITAAQAVHW---------------------------------------FDLERFYKEAYRVLRK 128 (261)
T ss_pred ccccccccCCCcceeeehhhhhHHh---------------------------------------hchHHHHHHHHHHcCC
Confidence 2333 5999999999999999 2556688888899999
Q ss_pred CceEEEEecCcCCC
Q 017439 221 GGLLLLLTPTIRDG 234 (371)
Q Consensus 221 GG~lvl~~~gr~~~ 234 (371)
.|-+++...-+++.
T Consensus 129 ~Gg~iavW~Y~dd~ 142 (261)
T KOG3010|consen 129 DGGLIAVWNYNDDF 142 (261)
T ss_pred CCCEEEEEEccCCC
Confidence 88777777666543
|
|
| >PRK05134 bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase; Provisional | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00017 Score=67.20 Aligned_cols=96 Identities=16% Similarity=0.157 Sum_probs=57.6
Q ss_pred CCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEec
Q 017439 150 PESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTP 229 (371)
Q Consensus 150 P~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~ 229 (371)
+++++|+++++..+++.... ..+|+...+-|+|||++++...
T Consensus 111 ~~~~fD~Ii~~~~l~~~~~~--------------------------------------~~~l~~~~~~L~~gG~l~v~~~ 152 (233)
T PRK05134 111 HPGQFDVVTCMEMLEHVPDP--------------------------------------ASFVRACAKLVKPGGLVFFSTL 152 (233)
T ss_pred cCCCccEEEEhhHhhccCCH--------------------------------------HHHHHHHHHHcCCCcEEEEEec
Confidence 55789999999888874321 1257777788999999998876
Q ss_pred CcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEe
Q 017439 230 TIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTF 300 (371)
Q Consensus 230 gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~ 300 (371)
++.... ..+.... ...+..++- . .......+.+++|+.+++++.| |++.+....
T Consensus 153 ~~~~~~--------~~~~~~~---~~~~~~~~~-~----~~~~~~~~~~~~~~~~~l~~~G-f~~v~~~~~ 206 (233)
T PRK05134 153 NRNLKS--------YLLAIVG---AEYVLRMLP-K----GTHDYKKFIKPSELAAWLRQAG-LEVQDITGL 206 (233)
T ss_pred CCChHH--------HHHHHhh---HHHHhhhcC-c----ccCchhhcCCHHHHHHHHHHCC-CeEeeeeeE
Confidence 532110 0111111 111111111 0 0011123678999999999977 998877643
|
|
| >PRK11188 rrmJ 23S rRNA methyltransferase J; Provisional | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.00026 Score=65.69 Aligned_cols=109 Identities=18% Similarity=0.218 Sum_probs=65.7
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCCC
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPGS 143 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpgS 143 (371)
.-+|+|+|||+|..|..++ + +.. + .-.|+.-|+-. .+ .++ .-.+..| +
T Consensus 52 ~~~VLDlG~GtG~~t~~l~--------~-~~~---------~---~~~V~aVDi~~--~~----~~~--~v~~i~~---D 99 (209)
T PRK11188 52 GMTVVDLGAAPGGWSQYAV--------T-QIG---------D---KGRVIACDILP--MD----PIV--GVDFLQG---D 99 (209)
T ss_pred CCEEEEEcccCCHHHHHHH--------H-HcC---------C---CceEEEEeccc--cc----CCC--CcEEEec---C
Confidence 3589999999999888776 3 221 1 12566666633 11 111 1123333 3
Q ss_pred cccc--------cCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHH
Q 017439 144 FHGR--------LFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARA 215 (371)
Q Consensus 144 Fy~r--------LfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra 215 (371)
+.+. -++++++|+++|+.+.||... |. .| . ..+ .......|+.=.
T Consensus 100 ~~~~~~~~~i~~~~~~~~~D~V~S~~~~~~~g~-~~--~d-------------------~----~~~-~~~~~~~L~~~~ 152 (209)
T PRK11188 100 FRDELVLKALLERVGDSKVQVVMSDMAPNMSGT-PA--VD-------------------I----PRA-MYLVELALDMCR 152 (209)
T ss_pred CCChHHHHHHHHHhCCCCCCEEecCCCCccCCC-hH--HH-------------------H----HHH-HHHHHHHHHHHH
Confidence 4432 257889999999999999332 21 11 0 000 111346788888
Q ss_pred hhcccCceEEEEecCc
Q 017439 216 QELVPGGLLLLLTPTI 231 (371)
Q Consensus 216 ~EL~pGG~lvl~~~gr 231 (371)
+-|+|||++++.....
T Consensus 153 ~~LkpGG~~vi~~~~~ 168 (209)
T PRK11188 153 DVLAPGGSFVVKVFQG 168 (209)
T ss_pred HHcCCCCEEEEEEecC
Confidence 9999999999966543
|
|
| >TIGR00138 gidB 16S rRNA methyltransferase GidB | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00013 Score=66.09 Aligned_cols=128 Identities=16% Similarity=0.229 Sum_probs=73.1
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchh---hhhhcCCCCcceeeecc
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFN---TLFKSVPLSKKYFATGV 140 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn---~lF~~l~~~~~~f~~gv 140 (371)
..+|+|+|||+|..|+.+. . . .| ..+|+.-|.-.+--. ...+...-.+--+..+.
T Consensus 43 ~~~vLDiGcGtG~~s~~la--------~-~----------~~---~~~V~~iD~s~~~~~~a~~~~~~~~~~~i~~i~~d 100 (181)
T TIGR00138 43 GKKVIDIGSGAGFPGIPLA--------I-A----------RP---ELKLTLLESNHKKVAFLREVKAELGLNNVEIVNGR 100 (181)
T ss_pred CCeEEEecCCCCccHHHHH--------H-H----------CC---CCeEEEEeCcHHHHHHHHHHHHHhCCCCeEEEecc
Confidence 5799999999999988775 1 1 11 235667776654211 11111211121233443
Q ss_pred CCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc
Q 017439 141 PGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP 220 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 220 (371)
. ..+.+.+++|+++|.. +|++ | .+++.-.+-|+|
T Consensus 101 ~----~~~~~~~~fD~I~s~~-~~~~---~--------------------------------------~~~~~~~~~Lkp 134 (181)
T TIGR00138 101 A----EDFQHEEQFDVITSRA-LASL---N--------------------------------------VLLELTLNLLKV 134 (181)
T ss_pred h----hhccccCCccEEEehh-hhCH---H--------------------------------------HHHHHHHHhcCC
Confidence 2 2234578999999865 3331 1 134444566999
Q ss_pred CceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcc
Q 017439 221 GGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVP 273 (371)
Q Consensus 221 GG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P 273 (371)
||++++.. |... ..-+....+.+..+|+ ..-+.+++..|
T Consensus 135 gG~lvi~~-~~~~------------~~~~~~~~e~~~~~~~-~~~~~~~~~~~ 173 (181)
T TIGR00138 135 GGYFLAYK-GKKY------------LDEIEEAKRKCQVLGV-EPLEVPPLTGP 173 (181)
T ss_pred CCEEEEEc-CCCc------------HHHHHHHHHhhhhcCc-eEeeccccCCC
Confidence 99999874 2211 1334444566667787 45667777777
|
GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA. |
| >PF05401 NodS: Nodulation protein S (NodS); InterPro: IPR008715 This entry consists of nodulation S (NodS) proteins | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00013 Score=67.05 Aligned_cols=95 Identities=20% Similarity=0.297 Sum_probs=68.1
Q ss_pred CCCceEEeeecCCCCcccHHHHH------------HHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhc
Q 017439 61 TSSTFKIADLGCSTGPNTFIAMQ------------NIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKS 128 (371)
Q Consensus 61 ~~~~~~IaDlGCs~G~Ns~~~~~------------~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~ 128 (371)
.+..-+++|+|||.|..|..+.. ..|+..++ ++.. .| .+++..-|+|.-
T Consensus 41 ~~ry~~alEvGCs~G~lT~~LA~rCd~LlavDis~~Al~~Ar~-Rl~~-------~~---~V~~~~~dvp~~-------- 101 (201)
T PF05401_consen 41 RRRYRRALEVGCSIGVLTERLAPRCDRLLAVDISPRALARARE-RLAG-------LP---HVEWIQADVPEF-------- 101 (201)
T ss_dssp TSSEEEEEEE--TTSHHHHHHGGGEEEEEEEES-HHHHHHHHH-HTTT--------S---SEEEEES-TTT---------
T ss_pred ccccceeEecCCCccHHHHHHHHhhCceEEEeCCHHHHHHHHH-hcCC-------CC---CeEEEECcCCCC--------
Confidence 45678999999999999998864 55666666 5543 44 677777777652
Q ss_pred CCCCcceeeeccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHH
Q 017439 129 VPLSKKYFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIE 208 (371)
Q Consensus 129 l~~~~~~f~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~ 208 (371)
.|++++|+++.+-.+++|+.. .|+.
T Consensus 102 --------------------~P~~~FDLIV~SEVlYYL~~~-----------------------------------~~L~ 126 (201)
T PF05401_consen 102 --------------------WPEGRFDLIVLSEVLYYLDDA-----------------------------------EDLR 126 (201)
T ss_dssp ----------------------SS-EEEEEEES-GGGSSSH-----------------------------------HHHH
T ss_pred --------------------CCCCCeeEEEEehHhHcCCCH-----------------------------------HHHH
Confidence 388899999999999998652 4567
Q ss_pred HHHHHHHhhcccCceEEEEec
Q 017439 209 SFLNARAQELVPGGLLLLLTP 229 (371)
Q Consensus 209 ~FL~~Ra~EL~pGG~lvl~~~ 229 (371)
.++..-.+-|.|||.||+.-.
T Consensus 127 ~~l~~l~~~L~pgG~LV~g~~ 147 (201)
T PF05401_consen 127 AALDRLVAALAPGGHLVFGHA 147 (201)
T ss_dssp HHHHHHHHTEEEEEEEEEEEE
T ss_pred HHHHHHHHHhCCCCEEEEEEe
Confidence 788888899999999999664
|
The products of the rhizobial nodulation genes are involved in the biosynthesis of lipochitin oligosaccharides (LCOs), which are host-specific signal molecules required for nodule formation. NodS is an S-adenosyl-L-methionine (SAM)-dependent methyltransferase involved in N methylation of LCOs. NodS uses N-deacetylated chitooligosaccharides, the products of the NodBC proteins, as its methyl acceptors [].; GO: 0008757 S-adenosylmethionine-dependent methyltransferase activity, 0009312 oligosaccharide biosynthetic process, 0009877 nodulation; PDB: 3OFK_D 3OFJ_A. |
| >KOG1270 consensus Methyltransferases [Coenzyme transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.75 E-value=4.6e-05 Score=72.56 Aligned_cols=77 Identities=21% Similarity=0.170 Sum_probs=53.7
Q ss_pred hhHHHHHHHHHhhcccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHH
Q 017439 205 NDIESFLNARAQELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMG 284 (371)
Q Consensus 205 ~D~~~FL~~Ra~EL~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~ 284 (371)
+|...||++-.+-|+|||+++++..-|.-.-. . +.- .+.+.+...|-.|.-.-|+ |.+++|+..
T Consensus 172 ~dp~~~l~~l~~~lkP~G~lfittinrt~lS~--~-~~i----~~~E~vl~ivp~Gth~~ek---------fi~p~e~~~ 235 (282)
T KOG1270|consen 172 KDPQEFLNCLSALLKPNGRLFITTINRTILSF--A-GTI----FLAEIVLRIVPKGTHTWEK---------FINPEELTS 235 (282)
T ss_pred hCHHHHHHHHHHHhCCCCceEeeehhhhHHHh--h-ccc----cHHHHHHHhcCCCCcCHHH---------cCCHHHHHH
Confidence 45667999999999999999999987742110 0 011 1222233367778776666 889999999
Q ss_pred HhhcCCceEEEEEE
Q 017439 285 HIKRNKNFSIEIMN 298 (371)
Q Consensus 285 ~i~~~g~F~I~~~e 298 (371)
+++.++ +.++.+-
T Consensus 236 ~l~~~~-~~v~~v~ 248 (282)
T KOG1270|consen 236 ILNANG-AQVNDVV 248 (282)
T ss_pred HHHhcC-cchhhhh
Confidence 999975 7765554
|
|
| >KOG1541 consensus Predicted protein carboxyl methylase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00013 Score=68.01 Aligned_cols=58 Identities=17% Similarity=0.187 Sum_probs=45.1
Q ss_pred cCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEE
Q 017439 148 LFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLL 227 (371)
Q Consensus 148 LfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~ 227 (371)
=|+++++|-++|-.|+|||=..-+...+ =++.+..|+..-..-|++|++-|+.
T Consensus 107 pfrpGtFDg~ISISAvQWLcnA~~s~~~---------------------------P~~Rl~~FF~tLy~~l~rg~raV~Q 159 (270)
T KOG1541|consen 107 PFRPGTFDGVISISAVQWLCNADKSLHV---------------------------PKKRLLRFFGTLYSCLKRGARAVLQ 159 (270)
T ss_pred CCCCCccceEEEeeeeeeecccCccccC---------------------------hHHHHHHHhhhhhhhhccCceeEEE
Confidence 3799999999999999997554332211 1367778999999999999999999
Q ss_pred ecCcC
Q 017439 228 TPTIR 232 (371)
Q Consensus 228 ~~gr~ 232 (371)
+--..
T Consensus 160 fYpen 164 (270)
T KOG1541|consen 160 FYPEN 164 (270)
T ss_pred ecccc
Confidence 95443
|
|
| >PLN02336 phosphoethanolamine N-methyltransferase | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00011 Score=75.79 Aligned_cols=102 Identities=18% Similarity=0.161 Sum_probs=61.4
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC-C-CcceeeeccC
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP-L-SKKYFATGVP 141 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~-~-~~~~f~~gvp 141 (371)
..+|+|+|||+|.+|..+... + . +|+..|.-..--..- +... . .+-.|..+.-
T Consensus 38 ~~~vLDlGcG~G~~~~~la~~---------~--------------~-~v~giD~s~~~l~~a-~~~~~~~~~i~~~~~d~ 92 (475)
T PLN02336 38 GKSVLELGAGIGRFTGELAKK---------A--------------G-QVIALDFIESVIKKN-ESINGHYKNVKFMCADV 92 (475)
T ss_pred CCEEEEeCCCcCHHHHHHHhh---------C--------------C-EEEEEeCCHHHHHHH-HHHhccCCceEEEEecc
Confidence 358999999999999987721 1 0 234444322211110 0011 0 1112333332
Q ss_pred CCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccC
Q 017439 142 GSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPG 221 (371)
Q Consensus 142 gSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 221 (371)
... .--+|++++|+++|+.++||++. .++..+|+.-++-|+||
T Consensus 93 ~~~-~~~~~~~~fD~I~~~~~l~~l~~------------------------------------~~~~~~l~~~~r~Lk~g 135 (475)
T PLN02336 93 TSP-DLNISDGSVDLIFSNWLLMYLSD------------------------------------KEVENLAERMVKWLKVG 135 (475)
T ss_pred ccc-ccCCCCCCEEEEehhhhHHhCCH------------------------------------HHHHHHHHHHHHhcCCC
Confidence 111 11258899999999999999643 23445788888999999
Q ss_pred ceEEEE
Q 017439 222 GLLLLL 227 (371)
Q Consensus 222 G~lvl~ 227 (371)
|+|++.
T Consensus 136 G~l~~~ 141 (475)
T PLN02336 136 GYIFFR 141 (475)
T ss_pred eEEEEE
Confidence 999875
|
|
| >KOG2361 consensus Predicted methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00022 Score=67.28 Aligned_cols=195 Identities=18% Similarity=0.169 Sum_probs=107.8
Q ss_pred hHHhhHHHHHHHH--------HHHHHHHHHHHhhcccccccCCCCCceEEeeecCCCCcccHHHHHHHHHHHHhhhhccc
Q 017439 26 YAKNSIYQEAIVN--------GSKGMIAAGIRKTLDLKSLRLDTSSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDD 97 (371)
Q Consensus 26 Y~~nS~~Q~~~~~--------~~~~~l~~ai~~~~~~~~~~~~~~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~ 97 (371)
|.+++.-+....- +-..++.+...+++..+ ...+.+|+++|||.|...+.++ +..
T Consensus 31 y~~~~~k~wD~fy~~~~~rFfkdR~wL~~Efpel~~~~-----~~~~~~ilEvGCGvGNtvfPll----------~~~-- 93 (264)
T KOG2361|consen 31 YEREASKYWDTFYKIHENRFFKDRNWLLREFPELLPVD-----EKSAETILEVGCGVGNTVFPLL----------KTS-- 93 (264)
T ss_pred hhcchhhhhhhhhhhccccccchhHHHHHhhHHhhCcc-----ccChhhheeeccCCCcccchhh----------hcC--
Confidence 5555555444432 13567777777655432 2234499999999998888777 222
Q ss_pred CCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC--Ccce--eeeccCCCcccccCCCCceeEEEecCCccccCCCCccc
Q 017439 98 CECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL--SKKY--FATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEI 173 (371)
Q Consensus 98 ~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~--~~~~--f~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l 173 (371)
+ .| .+.+|.+|-..+-=+-+ +.-.. ...+ |+.-.-++=-..-++++|+|++..-+.| |-+|+.
T Consensus 94 ---~--n~---~l~v~acDfsp~Ai~~v-k~~~~~~e~~~~afv~Dlt~~~~~~~~~~~svD~it~IFvL---SAi~pe- 160 (264)
T KOG2361|consen 94 ---P--NN---RLKVYACDFSPRAIELV-KKSSGYDESRVEAFVWDLTSPSLKEPPEEGSVDIITLIFVL---SAIHPE- 160 (264)
T ss_pred ---C--CC---CeEEEEcCCChHHHHHH-HhccccchhhhcccceeccchhccCCCCcCccceEEEEEEE---eccChH-
Confidence 2 34 58899998777652222 22111 1111 2222211113333455666665444332 334331
Q ss_pred cCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHH
Q 017439 174 TNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCL 253 (371)
Q Consensus 174 ~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al 253 (371)
-+.+-+..-.+-|||||.|++-=.|+.+... +
T Consensus 161 --------------------------------k~~~a~~nl~~llKPGG~llfrDYg~~Dlaq----------------l 192 (264)
T KOG2361|consen 161 --------------------------------KMQSVIKNLRTLLKPGGSLLFRDYGRYDLAQ----------------L 192 (264)
T ss_pred --------------------------------HHHHHHHHHHHHhCCCcEEEEeecccchHHH----------------H
Confidence 1222355666889999999998777765311 1
Q ss_pred HHHHHcCCCchhhh-cccCcccccCCHHHHHHHhhcCCceEEEEEEEe
Q 017439 254 YDLANMGLIAEEKV-DSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTF 300 (371)
Q Consensus 254 ~~mv~eGli~~e~~-d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~ 300 (371)
+-. .+-.|++..+ ..=--+.|+.+.+|+++++.+.| |..++++.-
T Consensus 193 RF~-~~~~i~~nfYVRgDGT~~YfF~~eeL~~~f~~ag-f~~~~~~~~ 238 (264)
T KOG2361|consen 193 RFK-KGQCISENFYVRGDGTRAYFFTEEELDELFTKAG-FEEVQLEVD 238 (264)
T ss_pred hcc-CCceeecceEEccCCceeeeccHHHHHHHHHhcc-cchhcccce
Confidence 110 1222222111 12234789999999999999987 877666543
|
|
| >KOG1540 consensus Ubiquinone biosynthesis methyltransferase COQ5 [Coenzyme transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.0001 Score=69.99 Aligned_cols=174 Identities=20% Similarity=0.238 Sum_probs=101.8
Q ss_pred CCCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhc-----CCCC-cc
Q 017439 61 TSSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKS-----VPLS-KK 134 (371)
Q Consensus 61 ~~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~-----l~~~-~~ 134 (371)
+.+..+++|.+||||-.|+.++.. +.. +.+. . +=.|...|.-.+.-+--=+. |... .-
T Consensus 98 p~~~m~~lDvaGGTGDiaFril~~----v~s-~~~~-------~----~~~V~v~Dinp~mL~vgkqRa~~~~l~~~~~~ 161 (296)
T KOG1540|consen 98 PGKGMKVLDVAGGTGDIAFRILRH----VKS-QFGD-------R----ESKVTVLDINPHMLAVGKQRAKKRPLKASSRV 161 (296)
T ss_pred CCCCCeEEEecCCcchhHHHHHHh----hcc-ccCC-------C----CceEEEEeCCHHHHHHHHHHHhhcCCCcCCce
Confidence 455699999999999999998832 222 2211 1 23677777765543322111 1111 13
Q ss_pred eeeeccCCCccccc-CCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHH
Q 017439 135 YFATGVPGSFHGRL-FPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNA 213 (371)
Q Consensus 135 ~f~~gvpgSFy~rL-fP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~ 213 (371)
.++.|. -+.| ||++|+|...+++.+.-..+++.. ..+||+
T Consensus 162 ~w~~~d----AE~LpFdd~s~D~yTiafGIRN~th~~k~----------------------l~EAYR------------- 202 (296)
T KOG1540|consen 162 EWVEGD----AEDLPFDDDSFDAYTIAFGIRNVTHIQKA----------------------LREAYR------------- 202 (296)
T ss_pred EEEeCC----cccCCCCCCcceeEEEecceecCCCHHHH----------------------HHHHHH-------------
Confidence 455555 4455 699999999999998865554432 345665
Q ss_pred HHhhcccCceEEEEecCcCCCCCCCCCCCcchHHH---HHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCC
Q 017439 214 RAQELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDY---LGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNK 290 (371)
Q Consensus 214 Ra~EL~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~---l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g 290 (371)
=|||||++.|.-+..-+..+.......+.++. +.+.+....+.+..=-+-+. -+|+.||+...+++.|
T Consensus 203 ---VLKpGGrf~cLeFskv~~~~l~~fy~~ysf~VlpvlG~~iagd~~sYqYLveSI~------rfp~qe~f~~miedaG 273 (296)
T KOG1540|consen 203 ---VLKPGGRFSCLEFSKVENEPLKWFYDQYSFDVLPVLGEIIAGDRKSYQYLVESIR------RFPPQEEFASMIEDAG 273 (296)
T ss_pred ---hcCCCcEEEEEEccccccHHHHHHHHhhhhhhhchhhHhhhhhHhhhhhHHhhhh------cCCCHHHHHHHHHHcC
Confidence 89999999988887766433211111222222 23333322222221111111 1789999999999987
Q ss_pred ceEEEE-EEE
Q 017439 291 NFSIEI-MNT 299 (371)
Q Consensus 291 ~F~I~~-~e~ 299 (371)
|.... +|.
T Consensus 274 -F~~~~~ye~ 282 (296)
T KOG1540|consen 274 -FSSVNGYEN 282 (296)
T ss_pred -Ccccccccc
Confidence 87664 443
|
|
| >PF08003 Methyltransf_9: Protein of unknown function (DUF1698); InterPro: IPR010017 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (AdoMet) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00027 Score=68.94 Aligned_cols=144 Identities=19% Similarity=0.261 Sum_probs=98.5
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC----CCcceeee
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP----LSKKYFAT 138 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~----~~~~~f~~ 138 (371)
+--+|+|+||+.|.-++.+. . + -| . .|+--| |+-.|..-|..+. ....+|..
T Consensus 115 ~gk~VLDIGC~nGY~~frM~--------~-~----------GA---~-~ViGiD-P~~lf~~QF~~i~~~lg~~~~~~~l 170 (315)
T PF08003_consen 115 KGKRVLDIGCNNGYYSFRML--------G-R----------GA---K-SVIGID-PSPLFYLQFEAIKHFLGQDPPVFEL 170 (315)
T ss_pred CCCEEEEecCCCcHHHHHHh--------h-c----------CC---C-EEEEEC-CChHHHHHHHHHHHHhCCCccEEEc
Confidence 45699999999999999877 2 1 11 1 455555 5556666666643 33344443
Q ss_pred ccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 139 GVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 139 gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
.+ ..+.|-+.+++|++||--.|=-++. |- ..|+.-.+-|
T Consensus 171 pl---gvE~Lp~~~~FDtVF~MGVLYHrr~-Pl-------------------------------------~~L~~Lk~~L 209 (315)
T PF08003_consen 171 PL---GVEDLPNLGAFDTVFSMGVLYHRRS-PL-------------------------------------DHLKQLKDSL 209 (315)
T ss_pred Cc---chhhccccCCcCEEEEeeehhccCC-HH-------------------------------------HHHHHHHHhh
Confidence 21 1355555789999999876655433 31 1355666789
Q ss_pred ccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEE
Q 017439 219 VPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSI 294 (371)
Q Consensus 219 ~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I 294 (371)
+|||.|||.++..+.... .-++.++.+..|+-=|+.||..-++.++++.| |+-
T Consensus 210 ~~gGeLvLETlvi~g~~~----------------------~~L~P~~rYa~m~nv~FiPs~~~L~~wl~r~g-F~~ 262 (315)
T PF08003_consen 210 RPGGELVLETLVIDGDEN----------------------TVLVPEDRYAKMRNVWFIPSVAALKNWLERAG-FKD 262 (315)
T ss_pred CCCCEEEEEEeeecCCCc----------------------eEEccCCcccCCCceEEeCCHHHHHHHHHHcC-Cce
Confidence 999999999987654321 12456777788888889999999999999988 753
|
The reaction is catalysed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. Three classes of DNA Mtases transfer the methyl group from AdoMet to the target base to form either N-6-methyladenine, or N-4-methylcytosine, or C-5- methylcytosine. In C-5-cytosine Mtases, ten conserved motifs are arranged in the same order []. Motif I (a glycine-rich or closely related consensus sequence; FAGxGG in M.HhaI []), shared by other AdoMet-Mtases [], is part of the cofactor binding site and motif IV (PCQ) is part of the catalytic site. In contrast, sequence comparison among N-6-adenine and N-4-cytosine Mtases indicated two of the conserved segments [], although more conserved segments may be present. One of them corresponds to motif I in C-5-cytosine Mtases, and the other is named (D/N/S)PP(Y/F). Crystal structures are known for a number of Mtases [, , , ]. The cofactor binding sites are almost identical and the essential catalytic amino acids coincide. The comparable protein folding and the existence of equivalent amino acids in similar secondary and tertiary positions indicate that many (if not all) AdoMet-Mtases have a common catalytic domain structure. This permits tertiary structure prediction of other DNA, RNA, protein, and small-molecule AdoMet-Mtases from their amino acid sequences []. This entry represents a set of bacterial AdoMet-dependent tRNA (mo5U34)-methyltransferases. These enzymes catalyse the conversion of 5-hydroxyuridine (ho5U) to 5-methoxyuridine (mo5U) at the wobble position (34) of tRNA []. The 5-methoxyuridine is subsequently converted to uridine-5-oxyacetic acid, a modified nucleoside that is apparently necessary for the efficient decoding of G-ending Pro, Ala, and Val codons in these organisms [].; GO: 0016300 tRNA (uracil) methyltransferase activity, 0002098 tRNA wobble uridine modification |
| >TIGR03438 probable methyltransferase | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00024 Score=69.41 Aligned_cols=113 Identities=18% Similarity=0.248 Sum_probs=68.0
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC-CcceeeeccCC
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL-SKKYFATGVPG 142 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~-~~~~f~~gvpg 142 (371)
..+|+|+|||+|..|..+++... . ..+++--|+...-=....+.+.. .+..=+.++-|
T Consensus 64 ~~~iLELGcGtG~~t~~Ll~~l~-----------------~----~~~~~~iDiS~~mL~~a~~~l~~~~p~~~v~~i~g 122 (301)
T TIGR03438 64 GCELVELGSGSSRKTRLLLDALR-----------------Q----PARYVPIDISADALKESAAALAADYPQLEVHGICA 122 (301)
T ss_pred CCeEEecCCCcchhHHHHHHhhc-----------------c----CCeEEEEECCHHHHHHHHHHHHhhCCCceEEEEEE
Confidence 46899999999999998883321 0 13466666655432222233221 11122223334
Q ss_pred Cccccc-CCCC----ceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 143 SFHGRL-FPES----SLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 143 SFy~rL-fP~~----Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
.|.+.+ +|+. ...++++.+++++++ | .|..+||+.-++-
T Consensus 123 D~~~~~~~~~~~~~~~~~~~~~gs~~~~~~--~----------------------------------~e~~~~L~~i~~~ 166 (301)
T TIGR03438 123 DFTQPLALPPEPAAGRRLGFFPGSTIGNFT--P----------------------------------EEAVAFLRRIRQL 166 (301)
T ss_pred cccchhhhhcccccCCeEEEEecccccCCC--H----------------------------------HHHHHHHHHHHHh
Confidence 554422 2222 456777778888864 2 3445689999999
Q ss_pred cccCceEEEEecCcCC
Q 017439 218 LVPGGLLLLLTPTIRD 233 (371)
Q Consensus 218 L~pGG~lvl~~~gr~~ 233 (371)
|+|||+|++.+-..++
T Consensus 167 L~pgG~~lig~d~~~~ 182 (301)
T TIGR03438 167 LGPGGGLLIGVDLVKD 182 (301)
T ss_pred cCCCCEEEEeccCCCC
Confidence 9999999988755443
|
This model represents a distinct set of uncharacterized proteins found in the bacteria. Analysis by PSI-BLAST shows remote sequence homology to methyltransferases |
| >PF13649 Methyltransf_25: Methyltransferase domain; PDB: 3BXO_B 3GGD_A 3PX2_A 3PX3_A 3PFH_D 3PFG_A 1Y8C_A | Back alignment and domain information |
|---|
Probab=97.62 E-value=7.8e-05 Score=60.42 Aligned_cols=98 Identities=29% Similarity=0.375 Sum_probs=59.4
Q ss_pred EeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC--CCcceeeeccCCCc
Q 017439 67 IADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP--LSKKYFATGVPGSF 144 (371)
Q Consensus 67 IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~--~~~~~f~~gvpgSF 144 (371)
|+|+|||+|.++..+... + +. .| +.++..-|+-.+-....=+... ..+--|..+.....
T Consensus 1 ILDlgcG~G~~~~~l~~~---------~-~~------~~---~~~~~gvD~s~~~l~~~~~~~~~~~~~~~~~~~D~~~l 61 (101)
T PF13649_consen 1 ILDLGCGTGRVTRALARR---------F-DA------GP---SSRVIGVDISPEMLELAKKRFSEDGPKVRFVQADARDL 61 (101)
T ss_dssp -EEET-TTSHHHHHHHHH---------S---------------SEEEEEES-HHHHHHHHHHSHHTTTTSEEEESCTTCH
T ss_pred CEEeecCCcHHHHHHHHH---------h-hh------cc---cceEEEEECCHHHHHHHHHhchhcCCceEEEECCHhHC
Confidence 799999999999988832 2 11 12 3467777776665443333331 11233455553221
Q ss_pred ccccCCCCceeEEEecCC-ccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCc
Q 017439 145 HGRLFPESSLHVAHTSNA-LPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGG 222 (371)
Q Consensus 145 y~rLfP~~Svd~~~Ss~a-lHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 222 (371)
-++.+++|+++++.+ +|++++ +++..+|+.-++-|+|||
T Consensus 62 ---~~~~~~~D~v~~~~~~~~~~~~------------------------------------~~~~~ll~~~~~~l~pgG 101 (101)
T PF13649_consen 62 ---PFSDGKFDLVVCSGLSLHHLSP------------------------------------EELEALLRRIARLLRPGG 101 (101)
T ss_dssp ---HHHSSSEEEEEE-TTGGGGSSH------------------------------------HHHHHHHHHHHHTEEEEE
T ss_pred ---cccCCCeeEEEEcCCccCCCCH------------------------------------HHHHHHHHHHHHHhCCCC
Confidence 136779999999766 888443 456678999999999998
|
|
| >PRK05785 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00071 Score=63.45 Aligned_cols=75 Identities=21% Similarity=0.199 Sum_probs=45.4
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCCC
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPGS 143 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpgS 143 (371)
.-+|+|+|||+|.++..+. + ++ ..+|+.-|+-.+- -..-+. ..-++. ++
T Consensus 52 ~~~VLDlGcGtG~~~~~l~--------~-~~--------------~~~v~gvD~S~~M-l~~a~~----~~~~~~---~d 100 (226)
T PRK05785 52 PKKVLDVAAGKGELSYHFK--------K-VF--------------KYYVVALDYAENM-LKMNLV----ADDKVV---GS 100 (226)
T ss_pred CCeEEEEcCCCCHHHHHHH--------H-hc--------------CCEEEEECCCHHH-HHHHHh----ccceEE---ec
Confidence 4699999999999887665 2 11 0145666654332 111111 011222 23
Q ss_pred cccccCCCCceeEEEecCCccccCCC
Q 017439 144 FHGRLFPESSLHVAHTSNALPWLSKI 169 (371)
Q Consensus 144 Fy~rLfP~~Svd~~~Ss~alHWLS~v 169 (371)
+-.-=||++|+|+++|+++|||+.+.
T Consensus 101 ~~~lp~~d~sfD~v~~~~~l~~~~d~ 126 (226)
T PRK05785 101 FEALPFRDKSFDVVMSSFALHASDNI 126 (226)
T ss_pred hhhCCCCCCCEEEEEecChhhccCCH
Confidence 33333689999999999999996553
|
|
| >TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.0014 Score=61.06 Aligned_cols=60 Identities=18% Similarity=0.212 Sum_probs=42.1
Q ss_pred hHHHHHHHHHhhcccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHH
Q 017439 206 DIESFLNARAQELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGH 285 (371)
Q Consensus 206 D~~~FL~~Ra~EL~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~ 285 (371)
+...+++.-.+-|+|||++++..+..+.... .| |-|.-+.+|+++.
T Consensus 130 ~R~~~~~~l~~lLkpgG~~ll~~~~~~~~~~----------------------~g------------pp~~~~~~eL~~~ 175 (213)
T TIGR03840 130 MRQRYAAHLLALLPPGARQLLITLDYDQSEM----------------------AG------------PPFSVSPAEVEAL 175 (213)
T ss_pred HHHHHHHHHHHHcCCCCeEEEEEEEcCCCCC----------------------CC------------cCCCCCHHHHHHH
Confidence 3344778888999999987777665432210 01 4467889999999
Q ss_pred hhcCCceEEEEEEEee
Q 017439 286 IKRNKNFSIEIMNTFT 301 (371)
Q Consensus 286 i~~~g~F~I~~~e~~~ 301 (371)
+.. .|+|+.++...
T Consensus 176 f~~--~~~i~~~~~~~ 189 (213)
T TIGR03840 176 YGG--HYEIELLESRD 189 (213)
T ss_pred hcC--CceEEEEeecc
Confidence 975 58888888654
|
Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity. |
| >TIGR00091 tRNA (guanine-N(7)-)-methyltransferase | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00034 Score=63.84 Aligned_cols=113 Identities=19% Similarity=0.245 Sum_probs=63.3
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC--Ccc-eeeecc
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL--SKK-YFATGV 140 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~--~~~-~f~~gv 140 (371)
.-+|+|+|||+|..++.+... .| ..+++.-|.-..--...-+.+.. -.+ .|+.+.
T Consensus 17 ~~~ilDiGcG~G~~~~~la~~-------------------~p---~~~v~gvD~~~~~l~~a~~~~~~~~l~ni~~i~~d 74 (194)
T TIGR00091 17 APLHLEIGCGKGRFLIDMAKQ-------------------NP---DKNFLGIEIHTPIVLAANNKANKLGLKNLHVLCGD 74 (194)
T ss_pred CceEEEeCCCccHHHHHHHHh-------------------CC---CCCEEEEEeeHHHHHHHHHHHHHhCCCCEEEEccC
Confidence 458999999999998877731 11 22344444433222111111110 011 122222
Q ss_pred CCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc
Q 017439 141 PGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP 220 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 220 (371)
--.+-..++|++++|.+++++..+|..+ +... .++. -..||+.-++-|+|
T Consensus 75 ~~~~~~~~~~~~~~d~v~~~~pdpw~k~-~h~~----------~r~~-------------------~~~~l~~~~r~Lkp 124 (194)
T TIGR00091 75 ANELLDKFFPDGSLSKVFLNFPDPWPKK-RHNK----------RRIT-------------------QPHFLKEYANVLKK 124 (194)
T ss_pred HHHHHHhhCCCCceeEEEEECCCcCCCC-Cccc----------cccC-------------------CHHHHHHHHHHhCC
Confidence 1112234567789999999999999433 1100 0000 12377777889999
Q ss_pred CceEEEEe
Q 017439 221 GGLLLLLT 228 (371)
Q Consensus 221 GG~lvl~~ 228 (371)
||.+++..
T Consensus 125 gG~l~~~t 132 (194)
T TIGR00091 125 GGVIHFKT 132 (194)
T ss_pred CCEEEEEe
Confidence 99998877
|
In E. coli, this protein flanks the DNA repair protein MutY, also called micA. |
| >PRK13255 thiopurine S-methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.003 Score=59.01 Aligned_cols=59 Identities=24% Similarity=0.213 Sum_probs=39.9
Q ss_pred HHHHHHHHHhhcccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHh
Q 017439 207 IESFLNARAQELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHI 286 (371)
Q Consensus 207 ~~~FL~~Ra~EL~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i 286 (371)
...+++.-++-|+|||+.++......+.. + .| |-|.-+.+|+++.+
T Consensus 134 R~~~~~~l~~lL~pgG~~~l~~~~~~~~~-----------------~-----~g------------Pp~~~~~~el~~~~ 179 (218)
T PRK13255 134 RERYVQQLAALLPAGCRGLLVTLDYPQEE-----------------L-----AG------------PPFSVSDEEVEALY 179 (218)
T ss_pred HHHHHHHHHHHcCCCCeEEEEEEEeCCcc-----------------C-----CC------------CCCCCCHHHHHHHh
Confidence 34467788899999997655544332211 0 11 44678999999999
Q ss_pred hcCCceEEEEEEEee
Q 017439 287 KRNKNFSIEIMNTFT 301 (371)
Q Consensus 287 ~~~g~F~I~~~e~~~ 301 (371)
.. .|+|+.++...
T Consensus 180 ~~--~~~i~~~~~~~ 192 (218)
T PRK13255 180 AG--CFEIELLERQD 192 (218)
T ss_pred cC--CceEEEeeecc
Confidence 63 59998888653
|
|
| >TIGR03587 Pse_Me-ase pseudaminic acid biosynthesis-associated methylase | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.0007 Score=62.56 Aligned_cols=76 Identities=16% Similarity=0.156 Sum_probs=46.5
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPG 142 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpg 142 (371)
+.-+|+|+|||+|.++..+. + . .| ..+++.-|+-.+--...=+.++. .. +.. |
T Consensus 43 ~~~~VLDiGCG~G~~~~~L~--------~-~----------~~---~~~v~giDiS~~~l~~A~~~~~~-~~-~~~---~ 95 (204)
T TIGR03587 43 KIASILELGANIGMNLAALK--------R-L----------LP---FKHIYGVEINEYAVEKAKAYLPN-IN-IIQ---G 95 (204)
T ss_pred CCCcEEEEecCCCHHHHHHH--------H-h----------CC---CCeEEEEECCHHHHHHHHhhCCC-Cc-EEE---e
Confidence 34679999999998888765 2 1 11 23456666655443322121221 11 222 3
Q ss_pred CcccccCCCCceeEEEecCCcccc
Q 017439 143 SFHGRLFPESSLHVAHTSNALPWL 166 (371)
Q Consensus 143 SFy~rLfP~~Svd~~~Ss~alHWL 166 (371)
+..+ -+|++++|+|+|+.+||++
T Consensus 96 d~~~-~~~~~sfD~V~~~~vL~hl 118 (204)
T TIGR03587 96 SLFD-PFKDNFFDLVLTKGVLIHI 118 (204)
T ss_pred eccC-CCCCCCEEEEEECChhhhC
Confidence 3344 5789999999999999875
|
Members of this small clade are methyltransferases of the pfam08241 family and are observed within operons for the biosynthesis of pseudaminic acid, a component of exopolysaccharide and flagellin glycosyl modifications. Notable among these genomes is Pseudomonas fluorescens PfO-1. Possibly one of the two hydroxyl groups of pseudaminic acid, at positions 4 and 8 is converted to a methoxy group by this enzyme |
| >PF00891 Methyltransf_2: O-methyltransferase; InterPro: IPR001077 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (AdoMet) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.0025 Score=59.82 Aligned_cols=104 Identities=23% Similarity=0.344 Sum_probs=71.7
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccC
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVP 141 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvp 141 (371)
.+.-+|+|+|+|+|..+..++ + + .| .+++..-|||..= ...-+ ..+ +.-+|
T Consensus 99 ~~~~~vvDvGGG~G~~~~~l~--------~-~----------~P---~l~~~v~Dlp~v~-~~~~~----~~r--v~~~~ 149 (241)
T PF00891_consen 99 SGFKTVVDVGGGSGHFAIALA--------R-A----------YP---NLRATVFDLPEVI-EQAKE----ADR--VEFVP 149 (241)
T ss_dssp TTSSEEEEET-TTSHHHHHHH--------H-H----------ST---TSEEEEEE-HHHH-CCHHH----TTT--EEEEE
T ss_pred cCccEEEeccCcchHHHHHHH--------H-H----------CC---CCcceeeccHhhh-hcccc----ccc--ccccc
Confidence 345689999999999988776 3 2 45 6789999999741 11111 222 23378
Q ss_pred CCcccccCCCCceeEEEecCCcc-ccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc
Q 017439 142 GSFHGRLFPESSLHVAHTSNALP-WLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP 220 (371)
Q Consensus 142 gSFy~rLfP~~Svd~~~Ss~alH-WLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 220 (371)
|.|+ .=+|. .|+++-.+.|| | |+ +|-..+|+.-++.|+|
T Consensus 150 gd~f-~~~P~--~D~~~l~~vLh~~----~d---------------------------------~~~~~iL~~~~~al~p 189 (241)
T PF00891_consen 150 GDFF-DPLPV--ADVYLLRHVLHDW----SD---------------------------------EDCVKILRNAAAALKP 189 (241)
T ss_dssp S-TT-TCCSS--ESEEEEESSGGGS-----H---------------------------------HHHHHHHHHHHHHSEE
T ss_pred ccHH-hhhcc--ccceeeehhhhhc----ch---------------------------------HHHHHHHHHHHHHhCC
Confidence 8999 56677 99999999998 7 32 3445589999999999
Q ss_pred C--ceEEEEecCcCCC
Q 017439 221 G--GLLLLLTPTIRDG 234 (371)
Q Consensus 221 G--G~lvl~~~gr~~~ 234 (371)
| |++++.=.-.++.
T Consensus 190 g~~g~llI~e~~~~~~ 205 (241)
T PF00891_consen 190 GKDGRLLIIEMVLPDD 205 (241)
T ss_dssp CTTEEEEEEEEEECSS
T ss_pred CCCCeEEEEeeccCCC
Confidence 9 9998877655443
|
The reaction is catalysed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. Three classes of DNA Mtases transfer the methyl group from AdoMet to the target base to form either N-6-methyladenine, or N-4-methylcytosine, or C-5- methylcytosine. In C-5-cytosine Mtases, ten conserved motifs are arranged in the same order []. Motif I (a glycine-rich or closely related consensus sequence; FAGxGG in M.HhaI []), shared by other AdoMet-Mtases [], is part of the cofactor binding site and motif IV (PCQ) is part of the catalytic site. In contrast, sequence comparison among N-6-adenine and N-4-cytosine Mtases indicated two of the conserved segments [], although more conserved segments may be present. One of them corresponds to motif I in C-5-cytosine Mtases, and the other is named (D/N/S)PP(Y/F). Crystal structures are known for a number of Mtases [, , , ]. The cofactor binding sites are almost identical and the essential catalytic amino acids coincide. The comparable protein folding and the existence of equivalent amino acids in similar secondary and tertiary positions indicate that many (if not all) AdoMet-Mtases have a common catalytic domain structure. This permits tertiary structure prediction of other DNA, RNA, protein, and small-molecule AdoMet-Mtases from their amino acid sequences []. This domain includes a range of O-methyltransferases some of which utilise S-adenosyl methionine as substrate []. In prokaryotes, the major role of DNA methylation is to protect host DNA against degradation by restriction enzymes. In eukaryotes, DNA methylation has been implicated in the control of several cellular processes, including differentiation, gene regulation, and embryonic development. O-methyltransferases have a common catalytic domain structure, which might be universal among S-adenosyl-L-methionine (AdoMet)-dependent methyltransferases []. Comparative analysis of the predicted amino acid sequences of a number of plant O-methyltransferase cDNA clones show that they share some 32-71% sequence identity, and can be grouped according to the different compounds they utilise as substrates [].; GO: 0008171 O-methyltransferase activity; PDB: 1FPQ_A 1FP1_D 3P9K_B 3P9I_D 3P9C_A 3I53_A 3I5U_A 3I64_A 3I58_A 1ZG3_A .... |
| >PRK15001 SAM-dependent 23S ribosomal RNA mG1835 methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00074 Score=68.22 Aligned_cols=105 Identities=18% Similarity=0.202 Sum_probs=62.1
Q ss_pred eEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC----CCC--cceeee
Q 017439 65 FKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV----PLS--KKYFAT 138 (371)
Q Consensus 65 ~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l----~~~--~~~f~~ 138 (371)
-+|+|+|||+|..++.+. + + .| ..+|+..|...--....=.++ +.. +--|..
T Consensus 230 ~~VLDLGCGtGvi~i~la--------~-~----------~P---~~~V~~vD~S~~Av~~A~~N~~~n~~~~~~~v~~~~ 287 (378)
T PRK15001 230 GEIVDLGCGNGVIGLTLL--------D-K----------NP---QAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMI 287 (378)
T ss_pred CeEEEEeccccHHHHHHH--------H-h----------CC---CCEEEEEECCHHHHHHHHHHHHHcCcccCceEEEEE
Confidence 599999999999887666 2 2 23 456777777532211111111 110 112222
Q ss_pred ccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 139 GVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 139 gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
+ ..+.. +++.++|+|+|+-.+|+.-.++. . ...++++.=.+-|
T Consensus 288 ~---D~l~~-~~~~~fDlIlsNPPfh~~~~~~~----------------------~-----------ia~~l~~~a~~~L 330 (378)
T PRK15001 288 N---NALSG-VEPFRFNAVLCNPPFHQQHALTD----------------------N-----------VAWEMFHHARRCL 330 (378)
T ss_pred c---ccccc-CCCCCEEEEEECcCcccCccCCH----------------------H-----------HHHHHHHHHHHhc
Confidence 2 22333 35678999999999998433221 0 1123566666789
Q ss_pred ccCceEEEEe
Q 017439 219 VPGGLLLLLT 228 (371)
Q Consensus 219 ~pGG~lvl~~ 228 (371)
+|||.++++.
T Consensus 331 kpGG~L~iV~ 340 (378)
T PRK15001 331 KINGELYIVA 340 (378)
T ss_pred ccCCEEEEEE
Confidence 9999999985
|
|
| >cd02440 AdoMet_MTases S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy) | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00059 Score=52.73 Aligned_cols=99 Identities=23% Similarity=0.258 Sum_probs=60.1
Q ss_pred EEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhh---hcCCCCcceeeeccCC
Q 017439 66 KIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLF---KSVPLSKKYFATGVPG 142 (371)
Q Consensus 66 ~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF---~~l~~~~~~f~~gvpg 142 (371)
+|+|+|||.|.++..+.. . . ..+++..|+..+-....- ......+-.|..+.
T Consensus 1 ~ildig~G~G~~~~~~~~-------~------------~----~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 55 (107)
T cd02440 1 RVLDLGCGTGALALALAS-------G------------P----GARVTGVDISPVALELARKAAAALLADNVEVLKGD-- 55 (107)
T ss_pred CeEEEcCCccHHHHHHhc-------C------------C----CCEEEEEeCCHHHHHHHHHHHhcccccceEEEEcC--
Confidence 589999999998877662 0 1 225667776554433222 11111112222222
Q ss_pred Cccccc-CCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccC
Q 017439 143 SFHGRL-FPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPG 221 (371)
Q Consensus 143 SFy~rL-fP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 221 (371)
+.+.. .+.+++|+++++..+++. + .+...+++.-.+-|+||
T Consensus 56 -~~~~~~~~~~~~d~i~~~~~~~~~---~----------------------------------~~~~~~l~~~~~~l~~~ 97 (107)
T cd02440 56 -AEELPPEADESFDVIISDPPLHHL---V----------------------------------EDLARFLEEARRLLKPG 97 (107)
T ss_pred -hhhhccccCCceEEEEEccceeeh---h----------------------------------hHHHHHHHHHHHHcCCC
Confidence 22222 366789999999999985 1 23344677777788999
Q ss_pred ceEEEE
Q 017439 222 GLLLLL 227 (371)
Q Consensus 222 G~lvl~ 227 (371)
|.+++.
T Consensus 98 g~~~~~ 103 (107)
T cd02440 98 GVLVLT 103 (107)
T ss_pred CEEEEE
Confidence 999876
|
There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.). |
| >PRK09489 rsmC 16S ribosomal RNA m2G1207 methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00033 Score=69.84 Aligned_cols=104 Identities=12% Similarity=0.210 Sum_probs=63.7
Q ss_pred eEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCC--cceeeeccCC
Q 017439 65 FKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLS--KKYFATGVPG 142 (371)
Q Consensus 65 ~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~--~~~f~~gvpg 142 (371)
-+|+|+|||+|..++.+. + + .| ..+|...|....--...=.++... ..-+. ++
T Consensus 198 g~VLDlGCG~G~ls~~la--------~-~----------~p---~~~v~~vDis~~Al~~A~~nl~~n~l~~~~~---~~ 252 (342)
T PRK09489 198 GKVLDVGCGAGVLSAVLA--------R-H----------SP---KIRLTLSDVSAAALESSRATLAANGLEGEVF---AS 252 (342)
T ss_pred CeEEEeccCcCHHHHHHH--------H-h----------CC---CCEEEEEECCHHHHHHHHHHHHHcCCCCEEE---Ec
Confidence 489999999999887666 2 1 23 446777777532222111111100 11121 22
Q ss_pred CcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCc
Q 017439 143 SFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGG 222 (371)
Q Consensus 143 SFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 222 (371)
..+.. .++++|+++|+-.+||.-..- ..+...|++.=++-|+|||
T Consensus 253 D~~~~--~~~~fDlIvsNPPFH~g~~~~---------------------------------~~~~~~~i~~a~~~LkpgG 297 (342)
T PRK09489 253 NVFSD--IKGRFDMIISNPPFHDGIQTS---------------------------------LDAAQTLIRGAVRHLNSGG 297 (342)
T ss_pred ccccc--cCCCccEEEECCCccCCcccc---------------------------------HHHHHHHHHHHHHhcCcCC
Confidence 23332 367899999999999822110 1345668888889999999
Q ss_pred eEEEEe
Q 017439 223 LLLLLT 228 (371)
Q Consensus 223 ~lvl~~ 228 (371)
.|+++.
T Consensus 298 ~L~iVa 303 (342)
T PRK09489 298 ELRIVA 303 (342)
T ss_pred EEEEEE
Confidence 998876
|
|
| >TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.0017 Score=53.56 Aligned_cols=21 Identities=33% Similarity=0.455 Sum_probs=18.2
Q ss_pred HHHHHHHhhcccCceEEEEec
Q 017439 209 SFLNARAQELVPGGLLLLLTP 229 (371)
Q Consensus 209 ~FL~~Ra~EL~pGG~lvl~~~ 229 (371)
.+++.-.+.|+|||++++.+.
T Consensus 103 ~~l~~~~~~Lk~gG~li~~~~ 123 (124)
T TIGR02469 103 EILEAIWRRLRPGGRIVLNAI 123 (124)
T ss_pred HHHHHHHHHcCCCCEEEEEec
Confidence 578888899999999999863
|
This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL. |
| >PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0013 Score=59.32 Aligned_cols=20 Identities=25% Similarity=0.376 Sum_probs=17.3
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~ 82 (371)
...+|+|+|||+|..++.+.
T Consensus 31 ~~~~vLDiG~G~G~~~~~la 50 (187)
T PRK08287 31 RAKHLIDVGAGTGSVSIEAA 50 (187)
T ss_pred CCCEEEEECCcCCHHHHHHH
Confidence 34689999999999998877
|
|
| >PLN02585 magnesium protoporphyrin IX methyltransferase | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0054 Score=60.56 Aligned_cols=28 Identities=7% Similarity=0.127 Sum_probs=23.1
Q ss_pred cccCCHHHHHHHhhcCCceEEEEEEEeec
Q 017439 274 MYYPFLGELMGHIKRNKNFSIEIMNTFTH 302 (371)
Q Consensus 274 ~Y~ps~eE~~~~i~~~g~F~I~~~e~~~~ 302 (371)
.|+.+.+|+++++++.| |+|...+....
T Consensus 275 ~y~~s~eel~~lL~~AG-f~v~~~~~~~~ 302 (315)
T PLN02585 275 AYLHAEADVERALKKAG-WKVARREMTAT 302 (315)
T ss_pred eeeCCHHHHHHHHHHCC-CEEEEEEEeec
Confidence 46679999999999987 99988776643
|
|
| >COG4123 Predicted O-methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.001 Score=63.42 Aligned_cols=114 Identities=20% Similarity=0.239 Sum_probs=70.9
Q ss_pred CCceEEeeecCCCCcccHHHHHH--------------HHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhh
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQN--------------IIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFK 127 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~--------------ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~ 127 (371)
+..-+|+|+|||.|..++.+.+. ..+..++ ....+. .+ . .|+|+.-|+ +...
T Consensus 43 ~~~~~IlDlGaG~G~l~L~la~r~~~a~I~~VEiq~~~a~~A~~-nv~ln~-l~---~---ri~v~~~Di-----~~~~- 108 (248)
T COG4123 43 PKKGRILDLGAGNGALGLLLAQRTEKAKIVGVEIQEEAAEMAQR-NVALNP-LE---E---RIQVIEADI-----KEFL- 108 (248)
T ss_pred ccCCeEEEecCCcCHHHHHHhccCCCCcEEEEEeCHHHHHHHHH-HHHhCc-ch---h---ceeEehhhH-----HHhh-
Confidence 44899999999999999998853 1222222 111100 01 1 345554442 3222
Q ss_pred cCCCCcceeeeccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhH
Q 017439 128 SVPLSKKYFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDI 207 (371)
Q Consensus 128 ~l~~~~~~f~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~ 207 (371)
+-.+..++|+|+|+ |+ |++-... ..+.+..+-.+.+..-++
T Consensus 109 -------------------~~~~~~~fD~Ii~N---------PP---------yf~~~~~--~~~~~~~~~Ar~e~~~~l 149 (248)
T COG4123 109 -------------------KALVFASFDLIICN---------PP---------YFKQGSR--LNENPLRAIARHEITLDL 149 (248)
T ss_pred -------------------hcccccccCEEEeC---------CC---------CCCCccc--cCcChhhhhhhhhhcCCH
Confidence 22334489999986 43 2322222 223445566667778899
Q ss_pred HHHHHHHHhhcccCceEEEEe
Q 017439 208 ESFLNARAQELVPGGLLLLLT 228 (371)
Q Consensus 208 ~~FL~~Ra~EL~pGG~lvl~~ 228 (371)
..+++.-++-|||||++.++.
T Consensus 150 e~~i~~a~~~lk~~G~l~~V~ 170 (248)
T COG4123 150 EDLIRAAAKLLKPGGRLAFVH 170 (248)
T ss_pred HHHHHHHHHHccCCCEEEEEe
Confidence 999999999999999998887
|
|
| >PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0014 Score=59.86 Aligned_cols=21 Identities=29% Similarity=0.439 Sum_probs=18.0
Q ss_pred HHHHHHHHhhcccCceEEEEe
Q 017439 208 ESFLNARAQELVPGGLLLLLT 228 (371)
Q Consensus 208 ~~FL~~Ra~EL~pGG~lvl~~ 228 (371)
..|++..++-|+|||++++..
T Consensus 125 ~~~l~~~~~~LkpGG~lv~~~ 145 (187)
T PRK00107 125 SDLVELCLPLLKPGGRFLALK 145 (187)
T ss_pred HHHHHHHHHhcCCCeEEEEEe
Confidence 347888889999999999885
|
|
| >PF05148 Methyltransf_8: Hypothetical methyltransferase; InterPro: IPR007823 This family consists of uncharacterised eukaryotic proteins which are related to S-adenosyl-L-methionine-dependent methyltransferases | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0023 Score=59.42 Aligned_cols=85 Identities=25% Similarity=0.359 Sum_probs=46.8
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceee---e
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFA---T 138 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~---~ 138 (371)
++..+|||+|||++..+- ++.. .+.|+-=||...+ ..+-+ +
T Consensus 71 ~~~~viaD~GCGdA~la~--------~~~~-----------------~~~V~SfDLva~n-----------~~Vtacdia 114 (219)
T PF05148_consen 71 PKSLVIADFGCGDAKLAK--------AVPN-----------------KHKVHSFDLVAPN-----------PRVTACDIA 114 (219)
T ss_dssp -TTS-EEEES-TT-HHHH--------H--S--------------------EEEEESS-SS-----------TTEEES-TT
T ss_pred CCCEEEEECCCchHHHHH--------hccc-----------------CceEEEeeccCCC-----------CCEEEecCc
Confidence 456899999999987762 2222 2245555655432 11221 2
Q ss_pred ccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 139 GVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 139 gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
-|| ++++|+|+++.+-||.= .||..||+-=.+=|
T Consensus 115 ~vP-------L~~~svDv~VfcLSLMG---------------------------------------Tn~~~fi~EA~RvL 148 (219)
T PF05148_consen 115 NVP-------LEDESVDVAVFCLSLMG---------------------------------------TNWPDFIREANRVL 148 (219)
T ss_dssp S-S---------TT-EEEEEEES---S---------------------------------------S-HHHHHHHHHHHE
T ss_pred cCc-------CCCCceeEEEEEhhhhC---------------------------------------CCcHHHHHHHHhee
Confidence 333 48899999988877653 46777888888999
Q ss_pred ccCceEEEEe
Q 017439 219 VPGGLLLLLT 228 (371)
Q Consensus 219 ~pGG~lvl~~ 228 (371)
||||.|.+.=
T Consensus 149 K~~G~L~IAE 158 (219)
T PF05148_consen 149 KPGGILKIAE 158 (219)
T ss_dssp EEEEEEEEEE
T ss_pred ccCcEEEEEE
Confidence 9999997764
|
; GO: 0008168 methyltransferase activity; PDB: 2ZFU_B. |
| >PHA03411 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0021 Score=62.23 Aligned_cols=120 Identities=11% Similarity=0.065 Sum_probs=68.8
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCCC
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPGS 143 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpgS 143 (371)
.-+|+|+|||+|..++.+. . +. + ..+|+..|+-..- -.+.+..-+ +.-+..+.
T Consensus 65 ~grVLDLGcGsGilsl~la--------~-r~----------~---~~~V~gVDisp~a-l~~Ar~n~~-~v~~v~~D--- 117 (279)
T PHA03411 65 TGKVLDLCAGIGRLSFCML--------H-RC----------K---PEKIVCVELNPEF-ARIGKRLLP-EAEWITSD--- 117 (279)
T ss_pred CCeEEEcCCCCCHHHHHHH--------H-hC----------C---CCEEEEEECCHHH-HHHHHHhCc-CCEEEECc---
Confidence 3589999999998777665 2 11 1 2356777775532 333332211 12233333
Q ss_pred cccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHh--hHHHHHHHHHhhcccC
Q 017439 144 FHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKN--DIESFLNARAQELVPG 221 (371)
Q Consensus 144 Fy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~--D~~~FL~~Ra~EL~pG 221 (371)
+. .+.++.++|+++|+-.++++..... .+ ..+|..|.. -.+ .+..||+..+.-|+|+
T Consensus 118 ~~-e~~~~~kFDlIIsNPPF~~l~~~d~--~~--~~~~~GG~~----------------g~~~l~~~~~l~~v~~~L~p~ 176 (279)
T PHA03411 118 VF-EFESNEKFDVVISNPPFGKINTTDT--KD--VFEYTGGEF----------------EFKVMTLGQKFADVGYFIVPT 176 (279)
T ss_pred hh-hhcccCCCcEEEEcCCccccCchhh--hh--hhhhccCcc----------------ccccccHHHHHhhhHheecCC
Confidence 32 2234678999999999999542111 11 012221110 001 2567999999999999
Q ss_pred ceEEEEecCc
Q 017439 222 GLLLLLTPTI 231 (371)
Q Consensus 222 G~lvl~~~gr 231 (371)
|...+...|+
T Consensus 177 G~~~~~yss~ 186 (279)
T PHA03411 177 GSAGFAYSGR 186 (279)
T ss_pred ceEEEEEecc
Confidence 9888876554
|
|
| >PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0015 Score=60.59 Aligned_cols=20 Identities=15% Similarity=0.414 Sum_probs=17.0
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~ 82 (371)
...+|+|+|||+|..|..+.
T Consensus 76 ~g~~VLdIG~GsG~~t~~la 95 (212)
T PRK13942 76 EGMKVLEIGTGSGYHAAVVA 95 (212)
T ss_pred CcCEEEEECCcccHHHHHHH
Confidence 34799999999999997666
|
|
| >PF05175 MTS: Methyltransferase small domain; InterPro: IPR007848 This domain is found in ribosomal RNA small subunit methyltransferase C and in other methyltransferases | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0014 Score=58.52 Aligned_cols=108 Identities=17% Similarity=0.260 Sum_probs=63.4
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC--Ccceeeecc
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL--SKKYFATGV 140 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~--~~~~f~~gv 140 (371)
..-+|+|+|||+|..++.+. + + .| ...|+..|.-.+-....=+++.. -.+ +..+
T Consensus 31 ~~~~vLDlG~G~G~i~~~la--------~-~----------~~---~~~v~~vDi~~~a~~~a~~n~~~n~~~~--v~~~ 86 (170)
T PF05175_consen 31 KGGRVLDLGCGSGVISLALA--------K-R----------GP---DAKVTAVDINPDALELAKRNAERNGLEN--VEVV 86 (170)
T ss_dssp TTCEEEEETSTTSHHHHHHH--------H-T----------ST---CEEEEEEESBHHHHHHHHHHHHHTTCTT--EEEE
T ss_pred cCCeEEEecCChHHHHHHHH--------H-h----------CC---CCEEEEEcCCHHHHHHHHHHHHhcCccc--cccc
Confidence 34679999999999999877 2 1 22 34567777665544433333321 111 2222
Q ss_pred CCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc
Q 017439 141 PGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP 220 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 220 (371)
....++.+ +++++|+++|+--+|+-... -..-+..|++.=.+-|+|
T Consensus 87 ~~d~~~~~-~~~~fD~Iv~NPP~~~~~~~---------------------------------~~~~~~~~i~~a~~~Lk~ 132 (170)
T PF05175_consen 87 QSDLFEAL-PDGKFDLIVSNPPFHAGGDD---------------------------------GLDLLRDFIEQARRYLKP 132 (170)
T ss_dssp ESSTTTTC-CTTCEEEEEE---SBTTSHC---------------------------------HHHHHHHHHHHHHHHEEE
T ss_pred cccccccc-cccceeEEEEccchhccccc---------------------------------chhhHHHHHHHHHHhccC
Confidence 23445544 37899999998554441110 012234577777899999
Q ss_pred CceEEEEe
Q 017439 221 GGLLLLLT 228 (371)
Q Consensus 221 GG~lvl~~ 228 (371)
||.++++.
T Consensus 133 ~G~l~lv~ 140 (170)
T PF05175_consen 133 GGRLFLVI 140 (170)
T ss_dssp EEEEEEEE
T ss_pred CCEEEEEe
Confidence 99998866
|
; GO: 0008168 methyltransferase activity; PDB: 1WY7_A 1DUS_A 2OZV_A 2PJD_A 1VQ1_A 1NV9_A 1SG9_C 1NV8_A 3Q87_B 3DMF_A .... |
| >PLN02232 ubiquinone biosynthesis methyltransferase | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.00087 Score=59.37 Aligned_cols=47 Identities=13% Similarity=0.149 Sum_probs=37.4
Q ss_pred CCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEe
Q 017439 149 FPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLT 228 (371)
Q Consensus 149 fP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~ 228 (371)
++++++|++++++++||+.+ ...+|+.-++-|||||++++.-
T Consensus 40 ~~~~~fD~v~~~~~l~~~~d--------------------------------------~~~~l~ei~rvLkpGG~l~i~d 81 (160)
T PLN02232 40 FDDCEFDAVTMGYGLRNVVD--------------------------------------RLRAMKEMYRVLKPGSRVSILD 81 (160)
T ss_pred CCCCCeeEEEecchhhcCCC--------------------------------------HHHHHHHHHHHcCcCeEEEEEE
Confidence 47889999999999999632 1236777788999999999887
Q ss_pred cCcCC
Q 017439 229 PTIRD 233 (371)
Q Consensus 229 ~gr~~ 233 (371)
.+.++
T Consensus 82 ~~~~~ 86 (160)
T PLN02232 82 FNKSN 86 (160)
T ss_pred CCCCC
Confidence 76644
|
|
| >PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.00086 Score=61.78 Aligned_cols=19 Identities=21% Similarity=0.429 Sum_probs=16.6
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~ 82 (371)
..+|+|+|||+|..|..+.
T Consensus 73 ~~~VLDiG~GsG~~~~~la 91 (205)
T PRK13944 73 GMKILEVGTGSGYQAAVCA 91 (205)
T ss_pred CCEEEEECcCccHHHHHHH
Confidence 4689999999999997766
|
|
| >PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0025 Score=58.68 Aligned_cols=20 Identities=10% Similarity=0.278 Sum_probs=16.5
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~ 82 (371)
...+|+|+|||+|..|..+.
T Consensus 78 ~~~~VLeiG~GsG~~t~~la 97 (212)
T PRK00312 78 PGDRVLEIGTGSGYQAAVLA 97 (212)
T ss_pred CCCEEEEECCCccHHHHHHH
Confidence 45799999999999987543
|
|
| >TIGR00438 rrmJ cell division protein FtsJ | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0028 Score=57.33 Aligned_cols=25 Identities=20% Similarity=0.226 Sum_probs=20.5
Q ss_pred hhHHHHHHHHHhhcccCceEEEEec
Q 017439 205 NDIESFLNARAQELVPGGLLLLLTP 229 (371)
Q Consensus 205 ~D~~~FL~~Ra~EL~pGG~lvl~~~ 229 (371)
++...+|+.-.+-|+|||++++...
T Consensus 123 ~~~~~~l~~~~~~LkpgG~lvi~~~ 147 (188)
T TIGR00438 123 DLVELALDIAKEVLKPKGNFVVKVF 147 (188)
T ss_pred HHHHHHHHHHHHHccCCCEEEEEEc
Confidence 3566788888999999999999753
|
|
| >TIGR00537 hemK_rel_arch HemK-related putative methylase | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0034 Score=56.19 Aligned_cols=123 Identities=14% Similarity=0.109 Sum_probs=63.2
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCC-cceeeeccCC
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLS-KKYFATGVPG 142 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~-~~~f~~gvpg 142 (371)
.-+|+|+|||+|..++.+... . . +++..|+-..--...=+.+... .++ .-+-+
T Consensus 20 ~~~vLdlG~G~G~~~~~l~~~-------------------~----~-~v~~vD~s~~~~~~a~~~~~~~~~~~--~~~~~ 73 (179)
T TIGR00537 20 PDDVLEIGAGTGLVAIRLKGK-------------------G----K-CILTTDINPFAVKELRENAKLNNVGL--DVVMT 73 (179)
T ss_pred CCeEEEeCCChhHHHHHHHhc-------------------C----C-EEEEEECCHHHHHHHHHHHHHcCCce--EEEEc
Confidence 357999999999988876621 1 1 3455554332211111111000 011 11123
Q ss_pred CcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCc
Q 017439 143 SFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGG 222 (371)
Q Consensus 143 SFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 222 (371)
.+++. +.+++|+++|+..+|.....+.. .+....++.. .. .-...+..||+.-.+-|+|||
T Consensus 74 d~~~~--~~~~fD~Vi~n~p~~~~~~~~~~-~~~~~~~~~~-------~~---------~~~~~~~~~l~~~~~~Lk~gG 134 (179)
T TIGR00537 74 DLFKG--VRGKFDVILFNPPYLPLEDDLRR-GDWLDVAIDG-------GK---------DGRKVIDRFLDELPEILKEGG 134 (179)
T ss_pred ccccc--cCCcccEEEECCCCCCCcchhcc-cchhhhhhhc-------CC---------chHHHHHHHHHhHHHhhCCCC
Confidence 33332 24589999999988865432210 0000000000 00 001224568888888999999
Q ss_pred eEEEEecCc
Q 017439 223 LLLLLTPTI 231 (371)
Q Consensus 223 ~lvl~~~gr 231 (371)
++++...+.
T Consensus 135 ~~~~~~~~~ 143 (179)
T TIGR00537 135 RVQLIQSSL 143 (179)
T ss_pred EEEEEEecc
Confidence 999987544
|
The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. This model represents an archaeal and eukaryotic protein family that lacks an N-terminal domain found in HemK and its eubacterial homologs. It is found in a single copy in the first six completed archaeal and eukaryotic genomes. |
| >PF06080 DUF938: Protein of unknown function (DUF938); InterPro: IPR010342 This family consists of several hypothetical proteins from both prokaryotes and eukaryotes | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.004 Score=57.68 Aligned_cols=178 Identities=17% Similarity=0.162 Sum_probs=108.8
Q ss_pred HHHHHHHHHHHHHhhcccccccCCCCCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecC
Q 017439 37 VNGSKGMIAAGIRKTLDLKSLRLDTSSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFND 116 (371)
Q Consensus 37 ~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nD 116 (371)
.++.++-|.+.+++.++ .... +|+++|||||--+..+. . + .| .++.-=+|
T Consensus 7 aeRNk~pIl~vL~~~l~-------~~~~-~vLEiaSGtGqHa~~FA--------~-~----------lP---~l~WqPSD 56 (204)
T PF06080_consen 7 AERNKDPILEVLKQYLP-------DSGT-RVLEIASGTGQHAVYFA--------Q-A----------LP---HLTWQPSD 56 (204)
T ss_pred hhhCHhHHHHHHHHHhC-------ccCc-eEEEEcCCccHHHHHHH--------H-H----------CC---CCEEcCCC
Confidence 45556666677777553 2222 89999999998877666 2 1 45 56777888
Q ss_pred CCcCchhhhhhcCCCC------cceee--eccCCCccc-ccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCcee
Q 017439 117 HSNNDFNTLFKSVPLS------KKYFA--TGVPGSFHG-RLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHIL 187 (371)
Q Consensus 117 lp~NDFn~lF~~l~~~------~~~f~--~gvpgSFy~-rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~ 187 (371)
...+-+.++-.-+... .+..+ ...+-+--. --++.+++|.++|.+.+|- .|-...
T Consensus 57 ~~~~~~~sI~a~~~~~~~~Nv~~P~~lDv~~~~w~~~~~~~~~~~~~D~i~~~N~lHI---~p~~~~------------- 120 (204)
T PF06080_consen 57 PDDNLRPSIRAWIAEAGLPNVRPPLALDVSAPPWPWELPAPLSPESFDAIFCINMLHI---SPWSAV------------- 120 (204)
T ss_pred CChHHHhhHHHHHHhcCCcccCCCeEeecCCCCCccccccccCCCCcceeeehhHHHh---cCHHHH-------------
Confidence 8888877765433210 11111 110000000 0126789999999999998 443211
Q ss_pred ecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhh
Q 017439 188 CSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKV 267 (371)
Q Consensus 188 ~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~ 267 (371)
..+++.=++-|++||.|++.-+-..++...++. + ..+-..|++
T Consensus 121 --------------------~~lf~~a~~~L~~gG~L~~YGPF~~~G~~ts~S-N----~~FD~sLr~------------ 163 (204)
T PF06080_consen 121 --------------------EGLFAGAARLLKPGGLLFLYGPFNRDGKFTSES-N----AAFDASLRS------------ 163 (204)
T ss_pred --------------------HHHHHHHHHhCCCCCEEEEeCCcccCCEeCCcH-H----HHHHHHHhc------------
Confidence 236777789999999999988766666443321 1 233344542
Q ss_pred cccCcccccCCHHHHHHHhhcCCceEEEEEEEe
Q 017439 268 DSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTF 300 (371)
Q Consensus 268 d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~ 300 (371)
-+--|-.|..+++.++-.+.| ++++.....
T Consensus 164 --rdp~~GiRD~e~v~~lA~~~G-L~l~~~~~M 193 (204)
T PF06080_consen 164 --RDPEWGIRDIEDVEALAAAHG-LELEEDIDM 193 (204)
T ss_pred --CCCCcCccCHHHHHHHHHHCC-CccCccccc
Confidence 122244788999999999887 766554433
|
The function of this family is unknown. |
| >PRK14121 tRNA (guanine-N(7)-)-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0021 Score=65.08 Aligned_cols=110 Identities=24% Similarity=0.355 Sum_probs=65.5
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC--Ccc-eeeecc
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL--SKK-YFATGV 140 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~--~~~-~f~~gv 140 (371)
.-.++|+|||+|..++.+... .| +..++.-|.-..--..+-+.+.. -.+ .++.+.
T Consensus 123 ~p~vLEIGcGsG~~ll~lA~~-------------------~P---~~~~iGIEI~~~~i~~a~~ka~~~gL~NV~~i~~D 180 (390)
T PRK14121 123 EKILIEIGFGSGRHLLYQAKN-------------------NP---NKLFIGIEIHTPSIEQVLKQIELLNLKNLLIINYD 180 (390)
T ss_pred CCeEEEEcCcccHHHHHHHHh-------------------CC---CCCEEEEECCHHHHHHHHHHHHHcCCCcEEEEECC
Confidence 358999999999998877721 22 33455555443333333222211 112 233333
Q ss_pred CCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc
Q 017439 141 PGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP 220 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 220 (371)
..-+. ..+|++|+|.+++++...|..+ +. .++ -...||+.-++-|+|
T Consensus 181 A~~ll-~~~~~~s~D~I~lnFPdPW~Kk-rH------------RRl-------------------v~~~fL~e~~RvLkp 227 (390)
T PRK14121 181 ARLLL-ELLPSNSVEKIFVHFPVPWDKK-PH------------RRV-------------------ISEDFLNEALRVLKP 227 (390)
T ss_pred HHHhh-hhCCCCceeEEEEeCCCCcccc-ch------------hhc-------------------cHHHHHHHHHHHcCC
Confidence 22222 4579999999999988888222 10 001 024578888899999
Q ss_pred CceEEEEe
Q 017439 221 GGLLLLLT 228 (371)
Q Consensus 221 GG~lvl~~ 228 (371)
||.+.+.+
T Consensus 228 GG~l~l~T 235 (390)
T PRK14121 228 GGTLELRT 235 (390)
T ss_pred CcEEEEEE
Confidence 99998876
|
|
| >TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0013 Score=60.94 Aligned_cols=20 Identities=15% Similarity=0.388 Sum_probs=17.2
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~ 82 (371)
..-+|+|+|||+|.+|..+.
T Consensus 77 ~~~~VLDiG~GsG~~a~~la 96 (215)
T TIGR00080 77 PGMKVLEIGTGSGYQAAVLA 96 (215)
T ss_pred CcCEEEEECCCccHHHHHHH
Confidence 34699999999999998766
|
Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt. |
| >PF03291 Pox_MCEL: mRNA capping enzyme; InterPro: IPR004971 This is a family of viral mRNA capping enzymes | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.00094 Score=66.35 Aligned_cols=109 Identities=19% Similarity=0.278 Sum_probs=62.6
Q ss_pred CceEEeeecCCCCcccHHHHH-------------HHHHHHHhhhhcccC---CCCCCCCCcceeEEEecCCCcCchhhhh
Q 017439 63 STFKIADLGCSTGPNTFIAMQ-------------NIIEAIELIKYQDDC---ECEHDNPSGLEFQVFFNDHSNNDFNTLF 126 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~-------------~ii~~i~~~~~~~~~---~~~~~~p~~~ei~v~~nDlp~NDFn~lF 126 (371)
...+|+|||||-|.=...... ..|+..++ +|.... ... .+ .+.+.-.+.+.++|+.-
T Consensus 62 ~~~~VLDl~CGkGGDL~Kw~~~~i~~~vg~Dis~~si~ea~~-Ry~~~~~~~~~~--~~---~~~f~a~f~~~D~f~~~- 134 (331)
T PF03291_consen 62 PGLTVLDLCCGKGGDLQKWQKAKIKHYVGIDISEESIEEARE-RYKQLKKRNNSK--QY---RFDFIAEFIAADCFSES- 134 (331)
T ss_dssp TT-EEEEET-TTTTTHHHHHHTT-SEEEEEES-HHHHHHHHH-HHHHHHTSTT-H--TS---EECCEEEEEESTTCCSH-
T ss_pred CCCeEEEecCCCchhHHHHHhcCCCEEEEEeCCHHHHHHHHH-HHHHhccccccc--cc---cccchhheeccccccch-
Confidence 679999999999997766553 44555555 662210 000 11 11122222233333222
Q ss_pred hcCCCCcceeeeccCCCcccccCCC--CceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHH
Q 017439 127 KSVPLSKKYFATGVPGSFHGRLFPE--SSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFK 204 (371)
Q Consensus 127 ~~l~~~~~~f~~gvpgSFy~rLfP~--~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~ 204 (371)
-...+++ ..+|+|-+-.|||..=.. +
T Consensus 135 ------------------l~~~~~~~~~~FDvVScQFalHY~Fes----------------------------------e 162 (331)
T PF03291_consen 135 ------------------LREKLPPRSRKFDVVSCQFALHYAFES----------------------------------E 162 (331)
T ss_dssp ------------------HHCTSSSTTS-EEEEEEES-GGGGGSS----------------------------------H
T ss_pred ------------------hhhhccccCCCcceeehHHHHHHhcCC----------------------------------H
Confidence 1222333 589999999999993221 2
Q ss_pred hhHHHHHHHHHhhcccCceEEEEecC
Q 017439 205 NDIESFLNARAQELVPGGLLLLLTPT 230 (371)
Q Consensus 205 ~D~~~FL~~Ra~EL~pGG~lvl~~~g 230 (371)
+-.++||+.-++-|+|||.++.+++-
T Consensus 163 ~~ar~~l~Nvs~~Lk~GG~FIgT~~d 188 (331)
T PF03291_consen 163 EKARQFLKNVSSLLKPGGYFIGTTPD 188 (331)
T ss_dssp HHHHHHHHHHHHTEEEEEEEEEEEE-
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEecC
Confidence 34466999999999999999999974
|
The enzyme catalyses the first two reactions in the mRNA cap formation pathway. It is a heterodimer consisting of a large and small subunit. This entry is the large subunit. ; GO: 0006370 mRNA capping; PDB: 3EPP_A 3BGV_C 2VDW_C 1RI5_A 1RI3_A 1RI1_A 1Z3C_A 1RI2_A 2HV9_A 1RI4_A. |
| >PRK04266 fibrillarin; Provisional | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.01 Score=55.79 Aligned_cols=19 Identities=21% Similarity=0.230 Sum_probs=16.6
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~ 82 (371)
..+|+|+|||+|..|+.+.
T Consensus 73 g~~VlD~G~G~G~~~~~la 91 (226)
T PRK04266 73 GSKVLYLGAASGTTVSHVS 91 (226)
T ss_pred CCEEEEEccCCCHHHHHHH
Confidence 4699999999999988766
|
|
| >PRK14967 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0027 Score=59.09 Aligned_cols=123 Identities=16% Similarity=0.141 Sum_probs=63.0
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC--CCcceeeeccC
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP--LSKKYFATGVP 141 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~--~~~~~f~~gvp 141 (371)
.-+|+|+|||+|..++.+.. .. .-+++..|....--...=+.+. ..+-.+..
T Consensus 37 ~~~vLDlGcG~G~~~~~la~----------~~-------------~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~--- 90 (223)
T PRK14967 37 GRRVLDLCTGSGALAVAAAA----------AG-------------AGSVTAVDISRRAVRSARLNALLAGVDVDVRR--- 90 (223)
T ss_pred CCeEEEecCCHHHHHHHHHH----------cC-------------CCeEEEEECCHHHHHHHHHHHHHhCCeeEEEE---
Confidence 36899999999998887652 10 0135555554432211111110 01111222
Q ss_pred CCcccccCCCCceeEEEecCCccccCCCCccccCC-CCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc
Q 017439 142 GSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNS-NSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP 220 (371)
Q Consensus 142 gSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~-~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 220 (371)
+.+.. .+|++++|+++++--.+..+... ..+. ...+|+.| .. -..++..|++.=.+-|+|
T Consensus 91 ~d~~~-~~~~~~fD~Vi~npPy~~~~~~~--~~~~~~~~~~~~~------~~----------~~~~~~~~l~~a~~~Lk~ 151 (223)
T PRK14967 91 GDWAR-AVEFRPFDVVVSNPPYVPAPPDA--PPSRGPARAWDAG------PD----------GRAVLDRLCDAAPALLAP 151 (223)
T ss_pred Cchhh-hccCCCeeEEEECCCCCCCCccc--ccccChhHhhhCC------Cc----------HHHHHHHHHHHHHHhcCC
Confidence 34444 35778999999985443322111 0000 00011110 00 123456788878889999
Q ss_pred CceEEEEecCc
Q 017439 221 GGLLLLLTPTI 231 (371)
Q Consensus 221 GG~lvl~~~gr 231 (371)
||++++.....
T Consensus 152 gG~l~~~~~~~ 162 (223)
T PRK14967 152 GGSLLLVQSEL 162 (223)
T ss_pred CcEEEEEEecc
Confidence 99999776443
|
|
| >TIGR03534 RF_mod_PrmC protein-(glutamine-N5) methyltransferase, release factor-specific | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0019 Score=60.37 Aligned_cols=125 Identities=17% Similarity=0.198 Sum_probs=66.5
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC---CCcceeeec
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP---LSKKYFATG 139 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~---~~~~~f~~g 139 (371)
+..+|+|+|||+|..++.+.. . .| ..+++..|.-..-....=+.+. ..+--+..
T Consensus 87 ~~~~ilDig~G~G~~~~~l~~---------~----------~~---~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~- 143 (251)
T TIGR03534 87 GPLRVLDLGTGSGAIALALAK---------E----------RP---DARVTAVDISPEALAVARKNAARLGLDNVTFLQ- 143 (251)
T ss_pred CCCeEEEEeCcHhHHHHHHHH---------H----------CC---CCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEE-
Confidence 346899999999988887762 1 11 2356666654433322211111 11111222
Q ss_pred cCCCcccccCCCCceeEEEecCCccccCCC---CccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHh
Q 017439 140 VPGSFHGRLFPESSLHVAHTSNALPWLSKI---PKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQ 216 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~alHWLS~v---P~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~ 216 (371)
+.+.+ .+|++++|+++|+--.+..+.. +..+... .+.... .-....-.++..|++.-.+
T Consensus 144 --~d~~~-~~~~~~fD~Vi~npPy~~~~~~~~~~~~~~~~--------------e~~~~~-~~~~~~~~~~~~~i~~~~~ 205 (251)
T TIGR03534 144 --SDWFE-PLPGGKFDLIVSNPPYIPEADIHLLDPEVRFH--------------EPRLAL-FGGEDGLDFYRRIIAQAPR 205 (251)
T ss_pred --Cchhc-cCcCCceeEEEECCCCCchhhhhhcChhhhhc--------------CCHHHH-cCCCcHHHHHHHHHHHHHH
Confidence 23333 3578899999997655543221 1111100 000000 0001123556778999899
Q ss_pred hcccCceEEEEe
Q 017439 217 ELVPGGLLLLLT 228 (371)
Q Consensus 217 EL~pGG~lvl~~ 228 (371)
.|+|||.+++..
T Consensus 206 ~L~~gG~~~~~~ 217 (251)
T TIGR03534 206 LLKPGGWLLLEI 217 (251)
T ss_pred hcccCCEEEEEE
Confidence 999999999864
|
Members of this protein family are HemK (PrmC), a protein once thought to be involved in heme biosynthesis but now recognized to be a protein-glutamine methyltransferase that modifies the peptide chain release factors. All members of the seed alignment are encoded next to the release factor 1 gene (prfA) and confirmed by phylogenetic analysis. SIMBAL analysis (manuscript in prep.) shows the motif [LIV]PRx[DE]TE (in Escherichia coli, IPRPDTE) confers specificity for the release factors rather than for ribosomal protein L3. |
| >PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0042 Score=50.98 Aligned_cols=24 Identities=46% Similarity=0.773 Sum_probs=20.9
Q ss_pred hHHHHHHHHHhhcccCceEEEEec
Q 017439 206 DIESFLNARAQELVPGGLLLLLTP 229 (371)
Q Consensus 206 D~~~FL~~Ra~EL~pGG~lvl~~~ 229 (371)
+...|++.-.+-|+|||.+++.++
T Consensus 93 ~~~~~~~~~~~~L~~gG~~~~~~~ 116 (117)
T PF13659_consen 93 LYSRFLEAAARLLKPGGVLVFITP 116 (117)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHcCCCeEEEEEeC
Confidence 566789999999999999999864
|
... |
| >PF07021 MetW: Methionine biosynthesis protein MetW; InterPro: IPR010743 This family consists of several bacterial and one archaeal methionine biosynthesis MetW proteins | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0045 Score=56.76 Aligned_cols=94 Identities=17% Similarity=0.211 Sum_probs=64.5
Q ss_pred cCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEE
Q 017439 148 LFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLL 227 (371)
Q Consensus 148 LfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~ 227 (371)
-||++|+|.++-+-+|+=+.+ |..+.. +-|+.|.+.+++
T Consensus 70 ~f~d~sFD~VIlsqtLQ~~~~-P~~vL~----------------------------------------EmlRVgr~~IVs 108 (193)
T PF07021_consen 70 DFPDQSFDYVILSQTLQAVRR-PDEVLE----------------------------------------EMLRVGRRAIVS 108 (193)
T ss_pred hCCCCCccEEehHhHHHhHhH-HHHHHH----------------------------------------HHHHhcCeEEEE
Confidence 379999999999999998765 654332 457889999999
Q ss_pred ecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccc------cCCHHHHHHHhhcCCceEEEEEEEee
Q 017439 228 TPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMY------YPFLGELMGHIKRNKNFSIEIMNTFT 301 (371)
Q Consensus 228 ~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y------~ps~eE~~~~i~~~g~F~I~~~e~~~ 301 (371)
|+.-. .|.. -..|.-.|..+..+ .+..+|| +-|..++++..++.| ++|++-..+.
T Consensus 109 FPNFg------------~W~~----R~~l~~~GrmPvt~--~lPy~WYdTPNih~~Ti~DFe~lc~~~~-i~I~~~~~~~ 169 (193)
T PF07021_consen 109 FPNFG------------HWRN----RLQLLLRGRMPVTK--ALPYEWYDTPNIHLCTIKDFEDLCRELG-IRIEERVFLD 169 (193)
T ss_pred ecChH------------HHHH----HHHHHhcCCCCCCC--CCCCcccCCCCcccccHHHHHHHHHHCC-CEEEEEEEEc
Confidence 95422 2332 12334457665543 3344444 569999999999987 8888777663
|
Biosynthesis of methionine from homoserine in Pseudomonas putida takes place in three steps. The first step is the acylation of homoserine to yield an acyl-L-homoserine. This reaction is catalysed by the products of the metXW genes and is equivalent to the first step in enterobacteria, Gram-positive bacteria and fungi, except that in these microorganisms the reaction is catalysed by a single polypeptide (the product of the metA gene in Escherichia coli and the met5 gene product in Neurospora crassa). In P. putida, as in Gram-positive bacteria and certain fungi, the second and third steps are a direct sulphydrylation that converts the O-acyl-L-homoserine into homocysteine and further methylation to yield methionine. The latter reaction can be mediated by either of the two methionine synthetases present in the cells []. |
| >PTZ00146 fibrillarin; Provisional | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.012 Score=57.37 Aligned_cols=19 Identities=21% Similarity=0.230 Sum_probs=16.7
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~ 82 (371)
-.+|+|+|||+|..|..+.
T Consensus 133 G~~VLDLGaG~G~~t~~lA 151 (293)
T PTZ00146 133 GSKVLYLGAASGTTVSHVS 151 (293)
T ss_pred CCEEEEeCCcCCHHHHHHH
Confidence 3689999999999888777
|
|
| >TIGR03533 L3_gln_methyl protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0098 Score=57.73 Aligned_cols=24 Identities=21% Similarity=0.285 Sum_probs=19.7
Q ss_pred hHHHHHHHHHhhcccCceEEEEec
Q 017439 206 DIESFLNARAQELVPGGLLLLLTP 229 (371)
Q Consensus 206 D~~~FL~~Ra~EL~pGG~lvl~~~ 229 (371)
....|++.-.+-|+|||++++.+.
T Consensus 229 ~~~~il~~a~~~L~~gG~l~~e~g 252 (284)
T TIGR03533 229 LVRRILAEAADHLNENGVLVVEVG 252 (284)
T ss_pred HHHHHHHHHHHhcCCCCEEEEEEC
Confidence 345688888889999999998874
|
Members of this protein family methylate ribosomal protein L3 on a glutamine side chain. This family is related to HemK, a protein-glutamine methyltranferase for peptide chain release factors. |
| >PF05891 Methyltransf_PK: AdoMet dependent proline di-methyltransferase; InterPro: IPR008576 This family consists of several eukaryotic proteins of unknown function that are S-adenosyl-L-methionine-dependent methyltransferase-like | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.003 Score=58.97 Aligned_cols=142 Identities=14% Similarity=0.137 Sum_probs=77.8
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhh-cCC----CCccee
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFK-SVP----LSKKYF 136 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~-~l~----~~~~~f 136 (371)
.+.-+.+|.|||-|+-|-.++...-+ +|=+.| |.-.|-.--+ .+. .-.++|
T Consensus 54 ~~~~~alDcGAGIGRVTk~lLl~~f~-----------------------~VDlVE-p~~~Fl~~a~~~l~~~~~~v~~~~ 109 (218)
T PF05891_consen 54 PKFNRALDCGAGIGRVTKGLLLPVFD-----------------------EVDLVE-PVEKFLEQAKEYLGKDNPRVGEFY 109 (218)
T ss_dssp ---SEEEEET-TTTHHHHHTCCCC-S-----------------------EEEEEE-S-HHHHHHHHHHTCCGGCCEEEEE
T ss_pred CCcceEEecccccchhHHHHHHHhcC-----------------------EeEEec-cCHHHHHHHHHHhcccCCCcceEE
Confidence 46899999999999999766521100 010111 1111111111 111 113577
Q ss_pred eeccCCCcccccCCC-CceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHH
Q 017439 137 ATGVPGSFHGRLFPE-SSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARA 215 (371)
Q Consensus 137 ~~gvpgSFy~rLfP~-~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra 215 (371)
..|. +..-|+ ++.|+||.-||+-.|++ +|+-.||+.-.
T Consensus 110 ~~gL-----Q~f~P~~~~YDlIW~QW~lghLTD------------------------------------~dlv~fL~RCk 148 (218)
T PF05891_consen 110 CVGL-----QDFTPEEGKYDLIWIQWCLGHLTD------------------------------------EDLVAFLKRCK 148 (218)
T ss_dssp ES-G-----GG----TT-EEEEEEES-GGGS-H------------------------------------HHHHHHHHHHH
T ss_pred ecCH-----hhccCCCCcEeEEEehHhhccCCH------------------------------------HHHHHHHHHHH
Confidence 7775 344465 79999999887766443 79999999999
Q ss_pred hhcccCceEEEEe-cCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEE
Q 017439 216 QELVPGGLLLLLT-PTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSI 294 (371)
Q Consensus 216 ~EL~pGG~lvl~~-~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I 294 (371)
+.|+|||.+|+== ....+.+.... .++ ...||.+.++.++++.| ++|
T Consensus 149 ~~L~~~G~IvvKEN~~~~~~~~~D~------------------~Ds-------------SvTRs~~~~~~lF~~AG-l~~ 196 (218)
T PF05891_consen 149 QALKPNGVIVVKENVSSSGFDEFDE------------------EDS-------------SVTRSDEHFRELFKQAG-LRL 196 (218)
T ss_dssp HHEEEEEEEEEEEEEESSSEEEEET------------------TTT-------------EEEEEHHHHHHHHHHCT--EE
T ss_pred HhCcCCcEEEEEecCCCCCCcccCC------------------ccC-------------eeecCHHHHHHHHHHcC-CEE
Confidence 9999999888732 22111101110 011 22688999999999987 988
Q ss_pred EEEEEe
Q 017439 295 EIMNTF 300 (371)
Q Consensus 295 ~~~e~~ 300 (371)
.+.+.-
T Consensus 197 v~~~~Q 202 (218)
T PF05891_consen 197 VKEEKQ 202 (218)
T ss_dssp EEEEE-
T ss_pred EEeccc
Confidence 877754
|
; GO: 0008168 methyltransferase activity; PDB: 1XTP_A 2EX4_B. |
| >PF03141 Methyltransf_29: Putative S-adenosyl-L-methionine-dependent methyltransferase; InterPro: IPR004159 Members of this family of hypothetical plant proteins are putative methyltransferases | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.0011 Score=68.40 Aligned_cols=22 Identities=14% Similarity=0.219 Sum_probs=18.6
Q ss_pred CCCceEEeeecCCCCcccHHHH
Q 017439 61 TSSTFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 61 ~~~~~~IaDlGCs~G~Ns~~~~ 82 (371)
....-+++|+|||+|.....++
T Consensus 115 ~g~iR~~LDvGcG~aSF~a~l~ 136 (506)
T PF03141_consen 115 GGGIRTALDVGCGVASFGAYLL 136 (506)
T ss_pred CCceEEEEeccceeehhHHHHh
Confidence 4667788999999999888777
|
; GO: 0008168 methyltransferase activity |
| >KOG3178 consensus Hydroxyindole-O-methyltransferase and related SAM-dependent methyltransferases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.053 Score=53.90 Aligned_cols=199 Identities=15% Similarity=0.148 Sum_probs=117.6
Q ss_pred ccceec-ccCCCCCCchHHhhHHHHHHHHHHHHHHHHHHHhhcccccccCCCCCceEEeeecCCCCcccHHHHHHHHHHH
Q 017439 11 SPEAYP-MVGGDGPHSYAKNSIYQEAIVNGSKGMIAAGIRKTLDLKSLRLDTSSTFKIADLGCSTGPNTFIAMQNIIEAI 89 (371)
Q Consensus 11 ~~~~~~-M~gG~g~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~IaDlGCs~G~Ns~~~~~~ii~~i 89 (371)
..++.. |-||-+..+|.-+-..|+.... ...++.+.+.+.+. . ....-..+|.|-|.|..+-.++
T Consensus 131 ~~~~~G~~l~~~~~~~~~~~~~~~~sm~~-l~~~~~~~il~~~~-G-----f~~v~~avDvGgGiG~v~k~ll------- 196 (342)
T KOG3178|consen 131 FATAHGMMLGGYGGADERFSKDFNGSMSF-LSTLVMKKILEVYT-G-----FKGVNVAVDVGGGIGRVLKNLL------- 196 (342)
T ss_pred CccccchhhhhhcccccccHHHHHHHHHH-HHHHHHHhhhhhhc-c-----cccCceEEEcCCcHhHHHHHHH-------
Confidence 344566 6677666666555555555433 23333333322221 1 2357789999999999888777
Q ss_pred HhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCCCcccccCCCCceeEEEecCCcc-ccCC
Q 017439 90 ELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPGSFHGRLFPESSLHVAHTSNALP-WLSK 168 (371)
Q Consensus 90 ~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpgSFy~rLfP~~Svd~~~Ss~alH-WLS~ 168 (371)
. + -| .|..+-=|+|.=.-..-+-. |. +--+.|-++.- .|+.- ++|--|+|| |
T Consensus 197 -~-~----------fp---~ik~infdlp~v~~~a~~~~-~g-----V~~v~gdmfq~-~P~~d--aI~mkWiLhdw--- 249 (342)
T KOG3178|consen 197 -S-K----------YP---HIKGINFDLPFVLAAAPYLA-PG-----VEHVAGDMFQD-TPKGD--AIWMKWILHDW--- 249 (342)
T ss_pred -H-h----------CC---CCceeecCHHHHHhhhhhhc-CC-----cceeccccccc-CCCcC--eEEEEeecccC---
Confidence 2 2 23 44455455554331111100 11 45566677777 77765 899888887 6
Q ss_pred CCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEecCcCCCCCCCC--CCCcchH
Q 017439 169 IPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTPTIRDGIPMFS--TPEGTNF 246 (371)
Q Consensus 169 vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~gr~~~~~~~~--~~~~~~~ 246 (371)
+ | +|...||+.-.+-|+|||.+++.=.-.+.+...+. .......
T Consensus 250 -t----D-----------------------------edcvkiLknC~~sL~~~GkIiv~E~V~p~e~~~dd~~s~v~~~~ 295 (342)
T KOG3178|consen 250 -T----D-----------------------------EDCVKILKNCKKSLPPGGKIIVVENVTPEEDKFDDIDSSVTRDM 295 (342)
T ss_pred -C----h-----------------------------HHHHHHHHHHHHhCCCCCEEEEEeccCCCCCCccccccceeehh
Confidence 3 2 78889999999999999998886543322211111 1112234
Q ss_pred HHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEeec
Q 017439 247 DYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFTH 302 (371)
Q Consensus 247 ~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~~~ 302 (371)
+++..+.. .-|+ -++.+|++..+.++| |.+-.+-..+.
T Consensus 296 d~lm~~~~---~~Gk--------------ert~~e~q~l~~~~g-F~~~~~~~~~~ 333 (342)
T KOG3178|consen 296 DLLMLTQT---SGGK--------------ERTLKEFQALLPEEG-FPVCMVALTAY 333 (342)
T ss_pred HHHHHHHh---ccce--------------eccHHHHHhcchhhc-CceeEEEeccC
Confidence 44444443 2254 589999999999987 87766655443
|
|
| >COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.027 Score=51.50 Aligned_cols=21 Identities=24% Similarity=0.235 Sum_probs=18.1
Q ss_pred CCceEEeeecCCCCcccHHHH
Q 017439 62 SSTFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~ 82 (371)
.+--++.|+|||||.-|+..+
T Consensus 33 ~~g~~l~DIGaGtGsi~iE~a 53 (187)
T COG2242 33 RPGDRLWDIGAGTGSITIEWA 53 (187)
T ss_pred CCCCEEEEeCCCccHHHHHHH
Confidence 334599999999999999888
|
|
| >COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.011 Score=55.94 Aligned_cols=72 Identities=22% Similarity=0.163 Sum_probs=44.7
Q ss_pred HHHHHHhhcccCceEEEEecCcCCCCCCCCCCCcchH--HHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhh
Q 017439 210 FLNARAQELVPGGLLLLLTPTIRDGIPMFSTPEGTNF--DYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIK 287 (371)
Q Consensus 210 FL~~Ra~EL~pGG~lvl~~~gr~~~~~~~~~~~~~~~--~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~ 287 (371)
|+++-++-+||||.|++...-|.-. .+.. -..+-.++ ++=.|.-+-++ +-.++|+...+.
T Consensus 143 ~~~~c~~lvkP~G~lf~STinrt~k--------a~~~~i~~ae~vl~-~vP~gTH~~~k---------~irp~El~~~~~ 204 (243)
T COG2227 143 FLRACAKLVKPGGILFLSTINRTLK--------AYLLAIIGAEYVLR-IVPKGTHDYRK---------FIKPAELIRWLL 204 (243)
T ss_pred HHHHHHHHcCCCcEEEEeccccCHH--------HHHHHHHHHHHHHH-hcCCcchhHHH---------hcCHHHHHHhcc
Confidence 8999999999999999999876421 1111 11222333 44555443333 456888888888
Q ss_pred cCCceEEEEEEEe
Q 017439 288 RNKNFSIEIMNTF 300 (371)
Q Consensus 288 ~~g~F~I~~~e~~ 300 (371)
..+ +++....-+
T Consensus 205 ~~~-~~~~~~~g~ 216 (243)
T COG2227 205 GAN-LKIIDRKGL 216 (243)
T ss_pred cCC-ceEEeecce
Confidence 755 665555433
|
|
| >KOG3045 consensus Predicted RNA methylase involved in rRNA processing [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.0078 Score=57.60 Aligned_cols=25 Identities=28% Similarity=0.604 Sum_probs=20.8
Q ss_pred hhHHHHHHHHHhhcccCceEEEEec
Q 017439 205 NDIESFLNARAQELVPGGLLLLLTP 229 (371)
Q Consensus 205 ~D~~~FL~~Ra~EL~pGG~lvl~~~ 229 (371)
.||..|++--.+=|++||.+.+.=.
T Consensus 241 tn~~df~kEa~RiLk~gG~l~IAEv 265 (325)
T KOG3045|consen 241 TNLADFIKEANRILKPGGLLYIAEV 265 (325)
T ss_pred ccHHHHHHHHHHHhccCceEEEEeh
Confidence 4677799999999999999987643
|
|
| >PRK11805 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.016 Score=57.01 Aligned_cols=22 Identities=18% Similarity=0.274 Sum_probs=17.9
Q ss_pred HHHHHHHHhhcccCceEEEEec
Q 017439 208 ESFLNARAQELVPGGLLLLLTP 229 (371)
Q Consensus 208 ~~FL~~Ra~EL~pGG~lvl~~~ 229 (371)
..|++.-.+-|+|||++++.+.
T Consensus 243 ~~i~~~a~~~L~pgG~l~~E~g 264 (307)
T PRK11805 243 RRILAEAPDYLTEDGVLVVEVG 264 (307)
T ss_pred HHHHHHHHHhcCCCCEEEEEEC
Confidence 4578887888999999998763
|
|
| >TIGR01177 conserved hypothetical protein TIGR01177 | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.05 Score=53.79 Aligned_cols=25 Identities=24% Similarity=0.262 Sum_probs=20.4
Q ss_pred HHHHHHHHHhhcccCceEEEEecCc
Q 017439 207 IESFLNARAQELVPGGLLLLLTPTI 231 (371)
Q Consensus 207 ~~~FL~~Ra~EL~pGG~lvl~~~gr 231 (371)
...+|+.=++-|+|||++++.++..
T Consensus 273 ~~~~l~~~~r~Lk~gG~lv~~~~~~ 297 (329)
T TIGR01177 273 YERSLEEFHEVLKSEGWIVYAVPTR 297 (329)
T ss_pred HHHHHHHHHHHccCCcEEEEEEcCC
Confidence 3557888788999999999998754
|
This family is found exclusively in the Archaea. |
| >TIGR00536 hemK_fam HemK family putative methylases | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.022 Score=55.12 Aligned_cols=25 Identities=20% Similarity=0.308 Sum_probs=20.3
Q ss_pred hhHHHHHHHHHhhcccCceEEEEec
Q 017439 205 NDIESFLNARAQELVPGGLLLLLTP 229 (371)
Q Consensus 205 ~D~~~FL~~Ra~EL~pGG~lvl~~~ 229 (371)
.+...+++.-.+-|+|||.+++.+.
T Consensus 221 ~~~~~ii~~a~~~L~~gG~l~~e~g 245 (284)
T TIGR00536 221 NILRQIIELAPDYLKPNGFLVCEIG 245 (284)
T ss_pred HHHHHHHHHHHHhccCCCEEEEEEC
Confidence 3556688888889999999998884
|
The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. Both E. coli and H. influenzae have two members rather than one. The members from the Mycoplasmas have an additional C-terminal domain. |
| >PRK10901 16S rRNA methyltransferase B; Provisional | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.056 Score=55.44 Aligned_cols=126 Identities=17% Similarity=0.096 Sum_probs=66.0
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCC--cceeeeccC
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLS--KKYFATGVP 141 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~--~~~f~~gvp 141 (371)
.-+|+|+|||+|.-|+.+.+. .. .-.|+..|.-..--..+=+.+... ...+..+..
T Consensus 245 g~~VLDlgaG~G~~t~~la~~---------~~-------------~~~v~a~D~s~~~l~~~~~n~~~~g~~~~~~~~D~ 302 (427)
T PRK10901 245 GERVLDACAAPGGKTAHILEL---------AP-------------QAQVVALDIDAQRLERVRENLQRLGLKATVIVGDA 302 (427)
T ss_pred CCEEEEeCCCCChHHHHHHHH---------cC-------------CCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEcCc
Confidence 468999999999999877732 10 113555555443322222222110 112333332
Q ss_pred CCcccccCCCCceeEEEecC---CccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 142 GSFHGRLFPESSLHVAHTSN---ALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 142 gSFy~rLfP~~Svd~~~Ss~---alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
.. ....++++++|.+++.. ...-+.+.|+... . ..++..+ .+.+....+|+.=.+-|
T Consensus 303 ~~-~~~~~~~~~fD~Vl~D~Pcs~~G~~~~~p~~~~-------~--------~~~~~l~----~l~~~q~~iL~~a~~~L 362 (427)
T PRK10901 303 RD-PAQWWDGQPFDRILLDAPCSATGVIRRHPDIKW-------L--------RRPEDIA----ALAALQSEILDALWPLL 362 (427)
T ss_pred cc-chhhcccCCCCEEEECCCCCcccccccCccccc-------c--------CCHHHHH----HHHHHHHHHHHHHHHhc
Confidence 21 11234567899998532 2222233343211 0 1122222 23345566888888999
Q ss_pred ccCceEEEEecCc
Q 017439 219 VPGGLLLLLTPTI 231 (371)
Q Consensus 219 ~pGG~lvl~~~gr 231 (371)
+|||+|+..++..
T Consensus 363 kpGG~lvystcs~ 375 (427)
T PRK10901 363 KPGGTLLYATCSI 375 (427)
T ss_pred CCCCEEEEEeCCC
Confidence 9999999888643
|
|
| >PRK09328 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.033 Score=52.92 Aligned_cols=24 Identities=29% Similarity=0.434 Sum_probs=19.9
Q ss_pred hhHHHHHHHHHhhcccCceEEEEe
Q 017439 205 NDIESFLNARAQELVPGGLLLLLT 228 (371)
Q Consensus 205 ~D~~~FL~~Ra~EL~pGG~lvl~~ 228 (371)
+++..|++.-.+-|+|||.+++..
T Consensus 215 ~~~~~~~~~~~~~Lk~gG~l~~e~ 238 (275)
T PRK09328 215 DFYRRIIEQAPRYLKPGGWLLLEI 238 (275)
T ss_pred HHHHHHHHHHHHhcccCCEEEEEE
Confidence 456678888889999999999865
|
|
| >TIGR00406 prmA ribosomal protein L11 methyltransferase | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.014 Score=56.77 Aligned_cols=18 Identities=28% Similarity=0.634 Sum_probs=15.2
Q ss_pred eEEeeecCCCCcccHHHH
Q 017439 65 FKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 65 ~~IaDlGCs~G~Ns~~~~ 82 (371)
-+|+|+|||+|..++.+.
T Consensus 161 ~~VLDvGcGsG~lai~aa 178 (288)
T TIGR00406 161 KNVIDVGCGSGILSIAAL 178 (288)
T ss_pred CEEEEeCCChhHHHHHHH
Confidence 689999999998876554
|
Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis. |
| >PRK07402 precorrin-6B methylase; Provisional | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.06 Score=48.89 Aligned_cols=25 Identities=36% Similarity=0.453 Sum_probs=19.1
Q ss_pred hHHHHHHHHHhhcccCceEEEEecC
Q 017439 206 DIESFLNARAQELVPGGLLLLLTPT 230 (371)
Q Consensus 206 D~~~FL~~Ra~EL~pGG~lvl~~~g 230 (371)
++..+|+.-.+-|+|||++++....
T Consensus 120 ~~~~~l~~~~~~LkpgG~li~~~~~ 144 (196)
T PRK07402 120 PIKEILQAVWQYLKPGGRLVATASS 144 (196)
T ss_pred CHHHHHHHHHHhcCCCeEEEEEeec
Confidence 3455677777789999999998743
|
|
| >COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.031 Score=52.01 Aligned_cols=49 Identities=29% Similarity=0.495 Sum_probs=33.0
Q ss_pred eeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEec
Q 017439 154 LHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTP 229 (371)
Q Consensus 154 vd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~ 229 (371)
+++.+---+..|=..-| .| .|+++.+.+++-+++.+ -|++||+||+-..
T Consensus 122 V~v~~gDG~~G~~~~aP---yD---------~I~Vtaaa~~vP~~Ll~---------------QL~~gGrlv~PvG 170 (209)
T COG2518 122 VTVRHGDGSKGWPEEAP---YD---------RIIVTAAAPEVPEALLD---------------QLKPGGRLVIPVG 170 (209)
T ss_pred eEEEECCcccCCCCCCC---cC---------EEEEeeccCCCCHHHHH---------------hcccCCEEEEEEc
Confidence 56666666677733333 22 37777766666666664 4999999999886
|
|
| >PRK00811 spermidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.014 Score=56.53 Aligned_cols=109 Identities=12% Similarity=0.164 Sum_probs=63.1
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhh---hhhcC-----CCCc
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNT---LFKSV-----PLSK 133 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~---lF~~l-----~~~~ 133 (371)
+++-+|+|+|||+|..+..+++ .. + .-+|...|+-.+=-.. .|..+ ...+
T Consensus 75 ~~p~~VL~iG~G~G~~~~~~l~----------~~---------~---~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~r 132 (283)
T PRK00811 75 PNPKRVLIIGGGDGGTLREVLK----------HP---------S---VEKITLVEIDERVVEVCRKYLPEIAGGAYDDPR 132 (283)
T ss_pred CCCCEEEEEecCchHHHHHHHc----------CC---------C---CCEEEEEeCCHHHHHHHHHHhHHhccccccCCc
Confidence 4567999999999999887762 11 0 0134444443321111 11111 1122
Q ss_pred ceeeeccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHH
Q 017439 134 KYFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNA 213 (371)
Q Consensus 134 ~~f~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~ 213 (371)
--+..+.+..|-.+ +++++|+|++-.+-+| .|.. ..|. ..|++.
T Consensus 133 v~v~~~Da~~~l~~--~~~~yDvIi~D~~dp~---~~~~------------------------~l~t-------~ef~~~ 176 (283)
T PRK00811 133 VELVIGDGIKFVAE--TENSFDVIIVDSTDPV---GPAE------------------------GLFT-------KEFYEN 176 (283)
T ss_pred eEEEECchHHHHhh--CCCcccEEEECCCCCC---Cchh------------------------hhhH-------HHHHHH
Confidence 34566666666554 6788999999766555 1210 1111 347777
Q ss_pred HHhhcccCceEEEEe
Q 017439 214 RAQELVPGGLLLLLT 228 (371)
Q Consensus 214 Ra~EL~pGG~lvl~~ 228 (371)
-.+-|+|||.|++..
T Consensus 177 ~~~~L~~gGvlv~~~ 191 (283)
T PRK00811 177 CKRALKEDGIFVAQS 191 (283)
T ss_pred HHHhcCCCcEEEEeC
Confidence 778999999998753
|
|
| >PRK14904 16S rRNA methyltransferase B; Provisional | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.059 Score=55.55 Aligned_cols=124 Identities=16% Similarity=0.116 Sum_probs=72.0
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC---Ccceeeecc
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL---SKKYFATGV 140 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~---~~~~f~~gv 140 (371)
.-+|+|+|||+|..|+.+.+ .... .-+|+..|.-..-...+=+.+.. ..-.+..+.
T Consensus 251 g~~VLDlgaG~G~kt~~la~---------~~~~------------~~~V~avD~s~~~l~~~~~~~~~~g~~~v~~~~~D 309 (445)
T PRK14904 251 GSTVLDLCAAPGGKSTFMAE---------LMQN------------RGQITAVDRYPQKLEKIRSHASALGITIIETIEGD 309 (445)
T ss_pred CCEEEEECCCCCHHHHHHHH---------HhCC------------CcEEEEEECCHHHHHHHHHHHHHhCCCeEEEEeCc
Confidence 36899999999999987662 1110 12577777766554444333321 111344444
Q ss_pred CCCcccccCCCCceeEEEe----cCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHh
Q 017439 141 PGSFHGRLFPESSLHVAHT----SNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQ 216 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~S----s~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~ 216 (371)
... +.|++++|.++. +..-+|- +-|+.... .+++..+ +..++-..+|..=++
T Consensus 310 a~~----~~~~~~fD~Vl~D~Pcsg~g~~~-r~p~~~~~---------------~~~~~~~----~l~~~q~~iL~~a~~ 365 (445)
T PRK14904 310 ARS----FSPEEQPDAILLDAPCTGTGVLG-RRAELRWK---------------LTPEKLA----ELVGLQAELLDHAAS 365 (445)
T ss_pred ccc----cccCCCCCEEEEcCCCCCcchhh-cCcchhhc---------------CCHHHHH----HHHHHHHHHHHHHHH
Confidence 333 336778999983 3333332 22432111 1122222 233455678999999
Q ss_pred hcccCceEEEEecCcC
Q 017439 217 ELVPGGLLLLLTPTIR 232 (371)
Q Consensus 217 EL~pGG~lvl~~~gr~ 232 (371)
-|+|||+|+..++...
T Consensus 366 ~lkpgG~lvystcs~~ 381 (445)
T PRK14904 366 LLKPGGVLVYATCSIE 381 (445)
T ss_pred hcCCCcEEEEEeCCCC
Confidence 9999999999987664
|
|
| >PRK14968 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.055 Score=48.02 Aligned_cols=24 Identities=42% Similarity=0.697 Sum_probs=19.8
Q ss_pred hHHHHHHHHHhhcccCceEEEEec
Q 017439 206 DIESFLNARAQELVPGGLLLLLTP 229 (371)
Q Consensus 206 D~~~FL~~Ra~EL~pGG~lvl~~~ 229 (371)
....|++.-.+-|+|||.+++...
T Consensus 126 ~~~~~i~~~~~~Lk~gG~~~~~~~ 149 (188)
T PRK14968 126 VIDRFLDEVGRYLKPGGRILLLQS 149 (188)
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEc
Confidence 356788888999999999988763
|
|
| >PLN03075 nicotianamine synthase; Provisional | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.032 Score=54.65 Aligned_cols=104 Identities=21% Similarity=0.239 Sum_probs=59.2
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC----C--CCccee
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV----P--LSKKYF 136 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l----~--~~~~~f 136 (371)
.+-+|||+|||.|+.|..++.. . . .| .-++.--|.-..- +.+-+.+ + ..+-.|
T Consensus 123 ~p~~VldIGcGpgpltaiilaa------~--~---------~p---~~~~~giD~d~~a-i~~Ar~~~~~~~gL~~rV~F 181 (296)
T PLN03075 123 VPTKVAFVGSGPLPLTSIVLAK------H--H---------LP---TTSFHNFDIDPSA-NDVARRLVSSDPDLSKRMFF 181 (296)
T ss_pred CCCEEEEECCCCcHHHHHHHHH------h--c---------CC---CCEEEEEeCCHHH-HHHHHHHhhhccCccCCcEE
Confidence 5789999999999988776621 1 1 11 2234444443311 1111121 1 112345
Q ss_pred eeccCCCcccccCC-CCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHH
Q 017439 137 ATGVPGSFHGRLFP-ESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARA 215 (371)
Q Consensus 137 ~~gvpgSFy~rLfP-~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra 215 (371)
..+.-.. +.+ .+.+|++|+. ++|-.++.++ ...|+.-+
T Consensus 182 ~~~Da~~----~~~~l~~FDlVF~~-ALi~~dk~~k------------------------------------~~vL~~l~ 220 (296)
T PLN03075 182 HTADVMD----VTESLKEYDVVFLA-ALVGMDKEEK------------------------------------VKVIEHLG 220 (296)
T ss_pred EECchhh----cccccCCcCEEEEe-cccccccccH------------------------------------HHHHHHHH
Confidence 5554322 232 3679999999 6654433221 12466777
Q ss_pred hhcccCceEEEEe
Q 017439 216 QELVPGGLLLLLT 228 (371)
Q Consensus 216 ~EL~pGG~lvl~~ 228 (371)
+-|+|||.+++-+
T Consensus 221 ~~LkPGG~Lvlr~ 233 (296)
T PLN03075 221 KHMAPGALLMLRS 233 (296)
T ss_pred HhcCCCcEEEEec
Confidence 8999999999887
|
|
| >PRK14903 16S rRNA methyltransferase B; Provisional | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.059 Score=55.44 Aligned_cols=127 Identities=14% Similarity=0.119 Sum_probs=74.1
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC---Ccceeeecc
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL---SKKYFATGV 140 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~---~~~~f~~gv 140 (371)
.-+|+|+|||+|.-|+.+. . ... + .-+|+..|+-.+--..+=+.+.. ..-.+..+.
T Consensus 238 g~~VLD~cagpGgkt~~la--------~-~~~---------~---~g~V~a~Dis~~rl~~~~~n~~r~g~~~v~~~~~D 296 (431)
T PRK14903 238 GLRVLDTCAAPGGKTTAIA--------E-LMK---------D---QGKILAVDISREKIQLVEKHAKRLKLSSIEIKIAD 296 (431)
T ss_pred CCEEEEeCCCccHHHHHHH--------H-HcC---------C---CCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEECc
Confidence 3589999999999998877 2 111 1 22577777755443333222211 111233333
Q ss_pred CCCcccccCCCCceeEEEe---cCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 141 PGSFHGRLFPESSLHVAHT---SNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~S---s~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
...+- . ++++++|.|++ ++.+..+.+.|+.... .+++.. .+..++-...|..=++-
T Consensus 297 a~~l~-~-~~~~~fD~Vl~DaPCsg~G~~~~~p~~~~~---------------~~~~~~----~~l~~~Q~~iL~~a~~~ 355 (431)
T PRK14903 297 AERLT-E-YVQDTFDRILVDAPCTSLGTARNHPEVLRR---------------VNKEDF----KKLSEIQLRIVSQAWKL 355 (431)
T ss_pred hhhhh-h-hhhccCCEEEECCCCCCCccccCChHHHHh---------------CCHHHH----HHHHHHHHHHHHHHHHh
Confidence 22211 1 23567899986 3556666666653221 112222 23345556789888999
Q ss_pred cccCceEEEEecCcC
Q 017439 218 LVPGGLLLLLTPTIR 232 (371)
Q Consensus 218 L~pGG~lvl~~~gr~ 232 (371)
|+|||+|+..++...
T Consensus 356 LkpGG~LvYsTCs~~ 370 (431)
T PRK14903 356 LEKGGILLYSTCTVT 370 (431)
T ss_pred cCCCCEEEEEECCCC
Confidence 999999999998754
|
|
| >PRK14902 16S rRNA methyltransferase B; Provisional | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.098 Score=53.89 Aligned_cols=126 Identities=19% Similarity=0.141 Sum_probs=65.2
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CCCcceeeecc
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PLSKKYFATGV 140 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~~~~~f~~gv 140 (371)
.-+|+|+|||+|.-|+.+.+. .. | .-+|+..|+-.+--..+=+.+ .-..-.+..+.
T Consensus 251 g~~VLDlgaG~G~~t~~la~~---------~~---------~---~~~v~avDi~~~~l~~~~~n~~~~g~~~v~~~~~D 309 (444)
T PRK14902 251 GDTVLDACAAPGGKTTHIAEL---------LK---------N---TGKVVALDIHEHKLKLIEENAKRLGLTNIETKALD 309 (444)
T ss_pred CCEEEEeCCCCCHHHHHHHHH---------hC---------C---CCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 368999999999999987732 11 1 124666666544322222221 11111233333
Q ss_pred CCCcccccCCCCceeEEEecC---CccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 141 PGSFHGRLFPESSLHVAHTSN---ALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~---alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
...+- .-++ +++|++++.. ....+++.|+... .+ .++..+ ...+--..+|+.=.+-
T Consensus 310 ~~~~~-~~~~-~~fD~Vl~D~Pcsg~G~~~~~p~~~~-------~~--------~~~~~~----~l~~~q~~iL~~a~~~ 368 (444)
T PRK14902 310 ARKVH-EKFA-EKFDKILVDAPCSGLGVIRRKPDIKY-------NK--------TKEDIE----SLQEIQLEILESVAQY 368 (444)
T ss_pred ccccc-chhc-ccCCEEEEcCCCCCCeeeccCcchhh-------cC--------CHHHHH----HHHHHHHHHHHHHHHH
Confidence 22211 1123 6789998742 3344444443211 11 112111 1223334578888889
Q ss_pred cccCceEEEEecCc
Q 017439 218 LVPGGLLLLLTPTI 231 (371)
Q Consensus 218 L~pGG~lvl~~~gr 231 (371)
|+|||+||..++..
T Consensus 369 LkpGG~lvystcs~ 382 (444)
T PRK14902 369 LKKGGILVYSTCTI 382 (444)
T ss_pred cCCCCEEEEEcCCC
Confidence 99999999776543
|
|
| >PF02390 Methyltransf_4: Putative methyltransferase ; InterPro: IPR003358 This entry represents tRNA (guanine-N-7) methyltransferase (2 | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.015 Score=53.43 Aligned_cols=111 Identities=24% Similarity=0.417 Sum_probs=69.4
Q ss_pred EEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC---CCcceeeeccCC
Q 017439 66 KIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP---LSKKYFATGVPG 142 (371)
Q Consensus 66 ~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~---~~~~~f~~gvpg 142 (371)
.++|+|||.|...+... . + .| +..++--|.-.+-....-+.+. ..+-.++.+...
T Consensus 20 l~lEIG~G~G~~l~~~A--------~-~----------~P---d~n~iGiE~~~~~v~~a~~~~~~~~l~Nv~~~~~da~ 77 (195)
T PF02390_consen 20 LILEIGCGKGEFLIELA--------K-R----------NP---DINFIGIEIRKKRVAKALRKAEKRGLKNVRFLRGDAR 77 (195)
T ss_dssp EEEEET-TTSHHHHHHH--------H-H----------ST---TSEEEEEES-HHHHHHHHHHHHHHTTSSEEEEES-CT
T ss_pred eEEEecCCCCHHHHHHH--------H-H----------CC---CCCEEEEecchHHHHHHHHHHHhhcccceEEEEccHH
Confidence 89999999998877666 2 1 34 5567777776655544444432 223356667777
Q ss_pred CcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCc
Q 017439 143 SFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGG 222 (371)
Q Consensus 143 SFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 222 (371)
.+...++|++|++-++-++.=-| |+..-- |.++ ..+ .||..-++-|+|||
T Consensus 78 ~~l~~~~~~~~v~~i~i~FPDPW----pK~rH~-------krRl----~~~---------------~fl~~~~~~L~~gG 127 (195)
T PF02390_consen 78 ELLRRLFPPGSVDRIYINFPDPW----PKKRHH-------KRRL----VNP---------------EFLELLARVLKPGG 127 (195)
T ss_dssp THHHHHSTTTSEEEEEEES---------SGGGG-------GGST----TSH---------------HHHHHHHHHEEEEE
T ss_pred HHHhhcccCCchheEEEeCCCCC----cccchh-------hhhc----CCc---------------hHHHHHHHHcCCCC
Confidence 88899999999999999988777 432110 1111 122 27888889999999
Q ss_pred eEEEEe
Q 017439 223 LLLLLT 228 (371)
Q Consensus 223 ~lvl~~ 228 (371)
.+.+.+
T Consensus 128 ~l~~~T 133 (195)
T PF02390_consen 128 ELYFAT 133 (195)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 997766
|
1.1.33 from EC), which catalyses the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. Capping of the pre-mRNA 5' end by addition a monomethylated guanosine cap (m(7)G) is an essential and the earliest modification in the biogenesis of mRNA []. The reaction is catalysed by three enzymes: triphosphatase, guanylyltransferase, and tRNA (guanine-N-7) methyltransferase [, ].; GO: 0008176 tRNA (guanine-N7-)-methyltransferase activity, 0006400 tRNA modification; PDB: 3DXZ_A 3DXY_A 3DXX_A 3CKK_A 3P2I_B 3P2K_D 3P2E_A 3MTE_B 3PB3_B 1YZH_B .... |
| >PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.024 Score=53.84 Aligned_cols=19 Identities=26% Similarity=0.485 Sum_probs=15.1
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~ 82 (371)
.-+|+|+|||+|..++.+.
T Consensus 120 ~~~VLDiGcGsG~l~i~~~ 138 (250)
T PRK00517 120 GKTVLDVGCGSGILAIAAA 138 (250)
T ss_pred CCEEEEeCCcHHHHHHHHH
Confidence 4689999999998766443
|
|
| >PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2 | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.035 Score=51.64 Aligned_cols=19 Identities=11% Similarity=0.280 Sum_probs=15.3
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~ 82 (371)
-.+|+|+|||+|.+|..+.
T Consensus 73 g~~VLeIGtGsGY~aAlla 91 (209)
T PF01135_consen 73 GDRVLEIGTGSGYQAALLA 91 (209)
T ss_dssp T-EEEEES-TTSHHHHHHH
T ss_pred CCEEEEecCCCcHHHHHHH
Confidence 4799999999999998776
|
1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A .... |
| >TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.1 Score=53.42 Aligned_cols=128 Identities=15% Similarity=0.071 Sum_probs=71.1
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCc-ceeeeccCC
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSK-KYFATGVPG 142 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~-~~f~~gvpg 142 (371)
.-+|+|+|||+|.-|+.+. + ... .-.++..|.-.+--..+-+.+.... .+-+..+.+
T Consensus 239 g~~VLDlcag~G~kt~~la--------~-~~~-------------~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~ 296 (426)
T TIGR00563 239 EETILDACAAPGGKTTHIL--------E-LAP-------------QAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDG 296 (426)
T ss_pred CCeEEEeCCCccHHHHHHH--------H-HcC-------------CCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecc
Confidence 4699999999999999877 2 111 1146666665554444433332110 111111111
Q ss_pred Cccc--ccCCCCceeEEEe---cCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 143 SFHG--RLFPESSLHVAHT---SNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 143 SFy~--rLfP~~Svd~~~S---s~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
.-.+ ...+.+++|.+++ ++++.-+.+.|+.... . +++..+ +..+.-..+|+.=++-
T Consensus 297 d~~~~~~~~~~~~fD~VllDaPcSg~G~~~~~p~~~~~--------------~-~~~~~~----~l~~lQ~~lL~~a~~~ 357 (426)
T TIGR00563 297 DGRGPSQWAENEQFDRILLDAPCSATGVIRRHPDIKWL--------------R-KPRDIA----ELAELQSEILDAIWPL 357 (426)
T ss_pred ccccccccccccccCEEEEcCCCCCCcccccCcchhhc--------------C-CHHHHH----HHHHHHHHHHHHHHHh
Confidence 1111 1225678999986 3455555566653211 1 122222 2223445678888889
Q ss_pred cccCceEEEEecCcC
Q 017439 218 LVPGGLLLLLTPTIR 232 (371)
Q Consensus 218 L~pGG~lvl~~~gr~ 232 (371)
|+|||+||..++.-.
T Consensus 358 LkpgG~lvystcs~~ 372 (426)
T TIGR00563 358 LKTGGTLVYATCSVL 372 (426)
T ss_pred cCCCcEEEEEeCCCC
Confidence 999999999987653
|
The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles. |
| >PRK14901 16S rRNA methyltransferase B; Provisional | Back alignment and domain information |
|---|
Probab=95.47 E-value=0.16 Score=52.17 Aligned_cols=27 Identities=33% Similarity=0.368 Sum_probs=21.7
Q ss_pred hhHHHHHHHHHhhcccCceEEEEecCc
Q 017439 205 NDIESFLNARAQELVPGGLLLLLTPTI 231 (371)
Q Consensus 205 ~D~~~FL~~Ra~EL~pGG~lvl~~~gr 231 (371)
+.-..+|..=++-|+|||+||..++..
T Consensus 361 ~~Q~~iL~~a~~~lkpgG~lvystcsi 387 (434)
T PRK14901 361 PLQAELLESLAPLLKPGGTLVYATCTL 387 (434)
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEeCCC
Confidence 444678999899999999999887554
|
|
| >PRK01544 bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.035 Score=58.31 Aligned_cols=127 Identities=13% Similarity=0.121 Sum_probs=63.2
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC---CCcceeeecc
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP---LSKKYFATGV 140 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~---~~~~~f~~gv 140 (371)
..+|+|+|||+|..++.+.. + .| ..+++..|.-..--...=+.+. -..++ .-+
T Consensus 139 ~~~VLDlG~GsG~iai~la~---------~----------~p---~~~v~avDis~~al~~A~~N~~~~~l~~~v--~~~ 194 (506)
T PRK01544 139 FLNILELGTGSGCIAISLLC---------E----------LP---NANVIATDISLDAIEVAKSNAIKYEVTDRI--QII 194 (506)
T ss_pred CCEEEEccCchhHHHHHHHH---------H----------CC---CCeEEEEECCHHHHHHHHHHHHHcCCccce--eee
Confidence 46899999999999987762 1 12 3356777774322111111110 00111 112
Q ss_pred CCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHH-HHHHhhHHHHHHHHHhhcc
Q 017439 141 PGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYS-AQFKNDIESFLNARAQELV 219 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~-~Q~~~D~~~FL~~Ra~EL~ 219 (371)
-+++++. +|++++|+++|+--....+..+....+.. + | .|. .+-+. ...-+.+..+++.-.+-|+
T Consensus 195 ~~D~~~~-~~~~~fDlIvsNPPYi~~~~~~~l~~~v~----~----~----EP~-~AL~gg~dGl~~~~~il~~a~~~L~ 260 (506)
T PRK01544 195 HSNWFEN-IEKQKFDFIVSNPPYISHSEKSEMAIETI----N----Y----EPS-IALFAEEDGLQAYFIIAENAKQFLK 260 (506)
T ss_pred ecchhhh-CcCCCccEEEECCCCCCchhhhhcCchhh----c----c----CcH-HHhcCCccHHHHHHHHHHHHHHhcc
Confidence 2344443 35678999999854444333221100000 0 0 000 00000 0011234557777788999
Q ss_pred cCceEEEEe
Q 017439 220 PGGLLLLLT 228 (371)
Q Consensus 220 pGG~lvl~~ 228 (371)
|||.+++..
T Consensus 261 ~gG~l~lEi 269 (506)
T PRK01544 261 PNGKIILEI 269 (506)
T ss_pred CCCEEEEEE
Confidence 999999865
|
|
| >TIGR03704 PrmC_rel_meth putative protein-(glutamine-N5) methyltransferase, unknown substrate-specific | Back alignment and domain information |
|---|
Probab=95.23 E-value=0.13 Score=49.10 Aligned_cols=23 Identities=30% Similarity=0.455 Sum_probs=18.5
Q ss_pred HHHHHHHHHhhcccCceEEEEec
Q 017439 207 IESFLNARAQELVPGGLLLLLTP 229 (371)
Q Consensus 207 ~~~FL~~Ra~EL~pGG~lvl~~~ 229 (371)
+..+++.=.+-|+|||++++...
T Consensus 195 ~~~i~~~a~~~L~~gG~l~l~~~ 217 (251)
T TIGR03704 195 LRRVAAGAPDWLAPGGHLLVETS 217 (251)
T ss_pred HHHHHHHHHHhcCCCCEEEEEEC
Confidence 45677777788999999998863
|
This protein family is closely related to two different families of protein-(glutamine-N5) methyltransferase. The first is PrmB, which modifies ribosomal protein L3 in some bacteria. The second is PrmC (HemK), which modifies peptide chain release factors 1 and 2 in most bacteria and also in eukaryotes. The glutamine side chain-binding motif NPPY shared by PrmB and PrmC is N[VAT]PY in this family. The protein substrate is unknown. |
| >PRK14966 unknown domain/N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase fusion protein; Provisional | Back alignment and domain information |
|---|
Probab=95.22 E-value=0.066 Score=54.88 Aligned_cols=22 Identities=32% Similarity=0.555 Sum_probs=17.5
Q ss_pred HHHHHHHHHhhcccCceEEEEe
Q 017439 207 IESFLNARAQELVPGGLLLLLT 228 (371)
Q Consensus 207 ~~~FL~~Ra~EL~pGG~lvl~~ 228 (371)
+..+++.-.+-|+|||.+++..
T Consensus 360 yr~Ii~~a~~~LkpgG~lilEi 381 (423)
T PRK14966 360 IRTLAQGAPDRLAEGGFLLLEH 381 (423)
T ss_pred HHHHHHHHHHhcCCCcEEEEEE
Confidence 4567777778899999988766
|
|
| >PRK03612 spermidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=95.21 E-value=0.074 Score=56.04 Aligned_cols=53 Identities=25% Similarity=0.276 Sum_probs=31.1
Q ss_pred HHHHHHhhcccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccc
Q 017439 210 FLNARAQELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMY 275 (371)
Q Consensus 210 FL~~Ra~EL~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y 275 (371)
|++.-.+-|+|||+++++... +.. .-+.+.++.+.|.+.|. .-+.-..++|.|
T Consensus 397 f~~~~~~~L~pgG~lv~~~~~-~~~----------~~~~~~~i~~~l~~~gf--~v~~~~~~vps~ 449 (521)
T PRK03612 397 FYRLLKRRLAPDGLLVVQSTS-PYF----------APKAFWSIEATLEAAGL--ATTPYHVNVPSF 449 (521)
T ss_pred HHHHHHHhcCCCeEEEEecCC-ccc----------chHHHHHHHHHHHHcCC--EEEEEEeCCCCc
Confidence 566666789999999887522 111 11445566666666676 222233455776
|
|
| >PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.13 Score=46.80 Aligned_cols=20 Identities=40% Similarity=0.503 Sum_probs=16.9
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~ 82 (371)
..-+|+|+|||+|..++.+.
T Consensus 40 ~~~~vlDlG~GtG~~s~~~a 59 (198)
T PRK00377 40 KGDMILDIGCGTGSVTVEAS 59 (198)
T ss_pred CcCEEEEeCCcCCHHHHHHH
Confidence 34699999999999888765
|
|
| >KOG4300 consensus Predicted methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.92 E-value=0.097 Score=48.80 Aligned_cols=153 Identities=20% Similarity=0.219 Sum_probs=85.4
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhh-hhcC----CCCcceee
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTL-FKSV----PLSKKYFA 137 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~l-F~~l----~~~~~~f~ 137 (371)
.-.-++++|||+|+|= +|-+. .| --.|.+-|=-.|- -.. -++. |..-.+|+
T Consensus 76 ~K~~vLEvgcGtG~Nf--------------kfy~~------~p---~~svt~lDpn~~m-ee~~~ks~~E~k~~~~~~fv 131 (252)
T KOG4300|consen 76 GKGDVLEVGCGTGANF--------------KFYPW------KP---INSVTCLDPNEKM-EEIADKSAAEKKPLQVERFV 131 (252)
T ss_pred CccceEEecccCCCCc--------------ccccC------CC---CceEEEeCCcHHH-HHHHHHHHhhccCcceEEEE
Confidence 3466899999999994 22210 23 2345555533332 222 1111 11224588
Q ss_pred eccCCCcccccC--CCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHH
Q 017439 138 TGVPGSFHGRLF--PESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARA 215 (371)
Q Consensus 138 ~gvpgSFy~rLf--P~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra 215 (371)
.|.+. +|. |+.|+|.+++..+|.= . +|-..-|+.-.
T Consensus 132 va~ge----~l~~l~d~s~DtVV~TlvLCS--v------------------------------------e~~~k~L~e~~ 169 (252)
T KOG4300|consen 132 VADGE----NLPQLADGSYDTVVCTLVLCS--V------------------------------------EDPVKQLNEVR 169 (252)
T ss_pred eechh----cCcccccCCeeeEEEEEEEec--c------------------------------------CCHHHHHHHHH
Confidence 88743 444 9999999998776632 1 12222466667
Q ss_pred hhcccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEE
Q 017439 216 QELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIE 295 (371)
Q Consensus 216 ~EL~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~ 295 (371)
+-|+|||++++.=-|+..-.. ...+|+...+-+-.+...|= .=--|.-+.+++. .|++.
T Consensus 170 rlLRpgG~iifiEHva~~y~~-----~n~i~q~v~ep~~~~~~dGC---------------~ltrd~~e~Leda-~f~~~ 228 (252)
T KOG4300|consen 170 RLLRPGGRIIFIEHVAGEYGF-----WNRILQQVAEPLWHLESDGC---------------VLTRDTGELLEDA-EFSID 228 (252)
T ss_pred HhcCCCcEEEEEecccccchH-----HHHHHHHHhchhhheeccce---------------EEehhHHHHhhhc-ccccc
Confidence 899999999998877754211 11133333333333444442 2233455566664 48888
Q ss_pred EEEEeec
Q 017439 296 IMNTFTH 302 (371)
Q Consensus 296 ~~e~~~~ 302 (371)
..+.++.
T Consensus 229 ~~kr~~~ 235 (252)
T KOG4300|consen 229 SCKRFNF 235 (252)
T ss_pred hhhcccC
Confidence 8777643
|
|
| >TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase | Back alignment and domain information |
|---|
Probab=94.55 E-value=0.37 Score=46.13 Aligned_cols=29 Identities=21% Similarity=0.393 Sum_probs=22.5
Q ss_pred HhhHHHHHHHHHhhcccCceEEEEecCcC
Q 017439 204 KNDIESFLNARAQELVPGGLLLLLTPTIR 232 (371)
Q Consensus 204 ~~D~~~FL~~Ra~EL~pGG~lvl~~~gr~ 232 (371)
.+.-..+|+.=++-|+|||+||..++...
T Consensus 175 ~~~q~~iL~~a~~~lkpgG~lvYstcs~~ 203 (264)
T TIGR00446 175 SALQKELIDSAFDALKPGGVLVYSTCSLE 203 (264)
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEeCCCC
Confidence 34445688888999999999998876543
|
|
| >COG2813 RsmC 16S RNA G1207 methylase RsmC [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=94.51 E-value=0.13 Score=50.33 Aligned_cols=102 Identities=18% Similarity=0.268 Sum_probs=60.8
Q ss_pred eEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhc---C--CCCc--ceee
Q 017439 65 FKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKS---V--PLSK--KYFA 137 (371)
Q Consensus 65 ~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~---l--~~~~--~~f~ 137 (371)
.+|+|+|||-|...+.+. + + .| ..++.+.|. |+..+=.. + .... -+|.
T Consensus 160 ~~vlDlGCG~Gvlg~~la--------~-~----------~p---~~~vtmvDv---n~~Av~~ar~Nl~~N~~~~~~v~~ 214 (300)
T COG2813 160 GKVLDLGCGYGVLGLVLA--------K-K----------SP---QAKLTLVDV---NARAVESARKNLAANGVENTEVWA 214 (300)
T ss_pred CcEEEeCCCccHHHHHHH--------H-h----------CC---CCeEEEEec---CHHHHHHHHHhHHHcCCCccEEEE
Confidence 399999999999999877 2 1 33 456666664 32222111 0 1111 2455
Q ss_pred eccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 138 TGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 138 ~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
+-+ |+.+.. ++|+|+|+=-+|==.++ ...+ + ..+++.=++-
T Consensus 215 s~~----~~~v~~--kfd~IisNPPfh~G~~v----------------------~~~~--~---------~~~i~~A~~~ 255 (300)
T COG2813 215 SNL----YEPVEG--KFDLIISNPPFHAGKAV----------------------VHSL--A---------QEIIAAAARH 255 (300)
T ss_pred ecc----cccccc--cccEEEeCCCccCCcch----------------------hHHH--H---------HHHHHHHHHh
Confidence 555 666666 89999997444410000 0101 1 1266777789
Q ss_pred cccCceEEEEecC
Q 017439 218 LVPGGLLLLLTPT 230 (371)
Q Consensus 218 L~pGG~lvl~~~g 230 (371)
|++||.|.++.-|
T Consensus 256 L~~gGeL~iVan~ 268 (300)
T COG2813 256 LKPGGELWIVANR 268 (300)
T ss_pred hccCCEEEEEEcC
Confidence 9999999998863
|
|
| >PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=94.42 E-value=0.075 Score=52.68 Aligned_cols=19 Identities=21% Similarity=0.434 Sum_probs=17.0
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~ 82 (371)
.-+|+|+|||+|.+|+.+.
T Consensus 81 g~~VLDIG~GtG~~a~~LA 99 (322)
T PRK13943 81 GMRVLEIGGGTGYNAAVMS 99 (322)
T ss_pred CCEEEEEeCCccHHHHHHH
Confidence 4689999999999998876
|
|
| >TIGR00417 speE spermidine synthase | Back alignment and domain information |
|---|
Probab=94.28 E-value=0.085 Score=50.70 Aligned_cols=19 Identities=16% Similarity=0.310 Sum_probs=16.1
Q ss_pred HHHHHHHhhcccCceEEEE
Q 017439 209 SFLNARAQELVPGGLLLLL 227 (371)
Q Consensus 209 ~FL~~Ra~EL~pGG~lvl~ 227 (371)
.|++.-++-|+|||.+++.
T Consensus 167 ef~~~~~~~L~pgG~lv~~ 185 (270)
T TIGR00417 167 EFYELLKKALNEDGIFVAQ 185 (270)
T ss_pred HHHHHHHHHhCCCcEEEEc
Confidence 3677777899999999987
|
the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM. |
| >PRK04457 spermidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=94.18 E-value=0.12 Score=49.51 Aligned_cols=24 Identities=13% Similarity=0.241 Sum_probs=19.4
Q ss_pred HHHHHHHhhcccCceEEEEecCcC
Q 017439 209 SFLNARAQELVPGGLLLLLTPTIR 232 (371)
Q Consensus 209 ~FL~~Ra~EL~pGG~lvl~~~gr~ 232 (371)
.|++.-.+-|+|||+++++..+++
T Consensus 158 efl~~~~~~L~pgGvlvin~~~~~ 181 (262)
T PRK04457 158 PFFDDCRNALSSDGIFVVNLWSRD 181 (262)
T ss_pred HHHHHHHHhcCCCcEEEEEcCCCc
Confidence 377777788999999999877653
|
|
| >KOG2904 consensus Predicted methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.17 E-value=0.87 Score=44.26 Aligned_cols=120 Identities=18% Similarity=0.250 Sum_probs=68.7
Q ss_pred eEEeeecCCCCcccHHHHHH--------------HHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC
Q 017439 65 FKIADLGCSTGPNTFIAMQN--------------IIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP 130 (371)
Q Consensus 65 ~~IaDlGCs~G~Ns~~~~~~--------------ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~ 130 (371)
-.|+|+|||+|.-|+.++.. .|.-..+ .++... . .. -|.|.++|+.+--|+..=
T Consensus 150 ~~ildlgtGSGaIslsll~~L~~~~v~AiD~S~~Ai~La~e-N~qr~~-l---~g---~i~v~~~~me~d~~~~~~---- 217 (328)
T KOG2904|consen 150 THILDLGTGSGAISLSLLHGLPQCTVTAIDVSKAAIKLAKE-NAQRLK-L---SG---RIEVIHNIMESDASDEHP---- 217 (328)
T ss_pred ceEEEecCCccHHHHHHHhcCCCceEEEEeccHHHHHHHHH-HHHHHh-h---cC---ceEEEecccccccccccc----
Confidence 37999999999999998862 2222222 222211 0 12 578999998877644431
Q ss_pred CCcceeeeccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHH-------
Q 017439 131 LSKKYFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQF------- 203 (371)
Q Consensus 131 ~~~~~f~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~------- 203 (371)
.+.+.+|++.|+ |+-+.+..- .+ ..|+|. .|..-.
T Consensus 218 ------------------l~~~~~dllvsN---------PPYI~~dD~----~~------l~~eV~-~yEp~lALdGg~e 259 (328)
T KOG2904|consen 218 ------------------LLEGKIDLLVSN---------PPYIRKDDN----RQ------LKPEVR-LYEPKLALDGGLE 259 (328)
T ss_pred ------------------cccCceeEEecC---------CCcccccch----hh------cCchhe-ecCchhhhccccc
Confidence 566778888876 333321110 00 001110 010000
Q ss_pred -HhhHHHHHHHHHhhcccCceEEEEecCcCCC
Q 017439 204 -KNDIESFLNARAQELVPGGLLLLLTPTIRDG 234 (371)
Q Consensus 204 -~~D~~~FL~~Ra~EL~pGG~lvl~~~gr~~~ 234 (371)
-.-+..|+..-.+-|+|||.+++.+.+++..
T Consensus 260 G~~~~~~~~~~a~R~Lq~gg~~~le~~~~~~~ 291 (328)
T KOG2904|consen 260 GYDNLVHYWLLATRMLQPGGFEQLELVERKEH 291 (328)
T ss_pred hhHHHHHHHHhhHhhcccCCeEEEEecccccC
Confidence 1123346677778999999999999998643
|
|
| >PLN02366 spermidine synthase | Back alignment and domain information |
|---|
Probab=94.16 E-value=0.14 Score=50.54 Aligned_cols=110 Identities=17% Similarity=0.189 Sum_probs=63.4
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcC--chhhh-hhc----CCCCcc
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNN--DFNTL-FKS----VPLSKK 134 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~N--DFn~l-F~~----l~~~~~ 134 (371)
+++-+|+++|||.|.....++ + +. + .-+|...|+... ++..- |.. +...+-
T Consensus 90 ~~pkrVLiIGgG~G~~~rell--------k--~~---------~---v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv 147 (308)
T PLN02366 90 PNPKKVLVVGGGDGGVLREIA--------R--HS---------S---VEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRV 147 (308)
T ss_pred CCCCeEEEEcCCccHHHHHHH--------h--CC---------C---CCeEEEEECCHHHHHHHHHhhhhhccccCCCce
Confidence 456799999999999665554 2 11 1 114444454432 21111 111 122344
Q ss_pred eeeeccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHH
Q 017439 135 YFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNAR 214 (371)
Q Consensus 135 ~f~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~R 214 (371)
-++.+.+..|..+. |++++|+|++-.+-+|- |. ...|. ..|++.-
T Consensus 148 ~vi~~Da~~~l~~~-~~~~yDvIi~D~~dp~~---~~------------------------~~L~t-------~ef~~~~ 192 (308)
T PLN02366 148 NLHIGDGVEFLKNA-PEGTYDAIIVDSSDPVG---PA------------------------QELFE-------KPFFESV 192 (308)
T ss_pred EEEEChHHHHHhhc-cCCCCCEEEEcCCCCCC---ch------------------------hhhhH-------HHHHHHH
Confidence 56777777776654 56789999986554441 11 00111 2367777
Q ss_pred HhhcccCceEEEEe
Q 017439 215 AQELVPGGLLLLLT 228 (371)
Q Consensus 215 a~EL~pGG~lvl~~ 228 (371)
.+-|+|||.|+...
T Consensus 193 ~~~L~pgGvlv~q~ 206 (308)
T PLN02366 193 ARALRPGGVVCTQA 206 (308)
T ss_pred HHhcCCCcEEEECc
Confidence 78899999997653
|
|
| >PRK01544 bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=93.80 E-value=0.19 Score=52.88 Aligned_cols=139 Identities=17% Similarity=0.137 Sum_probs=82.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcccccccCCCCCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcce
Q 017439 30 SIYQEAIVNGSKGMIAAGIRKTLDLKSLRLDTSSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLE 109 (371)
Q Consensus 30 S~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~e 109 (371)
+..|++.++...|.+.=..+. .. ..+.-.++|+|||.|..++.... + .| +
T Consensus 322 ~~~q~~~~e~~~p~~~i~~ek------lf--~~~~p~~lEIG~G~G~~~~~~A~---------~----------~p---~ 371 (506)
T PRK01544 322 SGVQQNLLDNELPKYLFSKEK------LV--NEKRKVFLEIGFGMGEHFINQAK---------M----------NP---D 371 (506)
T ss_pred CHHHHHHHHhhhhhhCCCHHH------hC--CCCCceEEEECCCchHHHHHHHH---------h----------CC---C
Confidence 447888888888876522211 11 34567899999999998887662 1 23 3
Q ss_pred eEEEecCCCcCchhhhhhcCCC--CcceeeeccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCcee
Q 017439 110 FQVFFNDHSNNDFNTLFKSVPL--SKKYFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHIL 187 (371)
Q Consensus 110 i~v~~nDlp~NDFn~lF~~l~~--~~~~f~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~ 187 (371)
.-++--|.-.+-...+.+.... -.++.+...-..+....||++|+|-+|-++.=-| |+.-- .|.++.
T Consensus 372 ~~~iGiE~~~~~~~~~~~~~~~~~l~N~~~~~~~~~~~~~~~~~~sv~~i~i~FPDPW----pKkrh-------~krRl~ 440 (506)
T PRK01544 372 ALFIGVEVYLNGVANVLKLAGEQNITNFLLFPNNLDLILNDLPNNSLDGIYILFPDPW----IKNKQ-------KKKRIF 440 (506)
T ss_pred CCEEEEEeeHHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHhcCcccccEEEEECCCCC----CCCCC-------cccccc
Confidence 3444444444333333333211 1233222212334567789999999999999888 54211 111111
Q ss_pred ecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEe
Q 017439 188 CSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLT 228 (371)
Q Consensus 188 ~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~ 228 (371)
.++ ||+.-+.-|+|||.+.+.+
T Consensus 441 ----~~~---------------fl~~~~~~Lk~gG~i~~~T 462 (506)
T PRK01544 441 ----NKE---------------RLKILQDKLKDNGNLVFAS 462 (506)
T ss_pred ----CHH---------------HHHHHHHhcCCCCEEEEEc
Confidence 222 7777789999999998765
|
|
| >KOG1331 consensus Predicted methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.74 E-value=0.071 Score=51.68 Aligned_cols=55 Identities=24% Similarity=0.241 Sum_probs=41.5
Q ss_pred cccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEE
Q 017439 146 GRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLL 225 (371)
Q Consensus 146 ~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lv 225 (371)
.-.+++.|+|.+.|.+.+||||.--.- .+-|+.-.+.|+|||.+.
T Consensus 96 ~~p~~~~s~d~~lsiavihhlsT~~RR-----------------------------------~~~l~e~~r~lrpgg~~l 140 (293)
T KOG1331|consen 96 KLPFREESFDAALSIAVIHHLSTRERR-----------------------------------ERALEELLRVLRPGGNAL 140 (293)
T ss_pred cCCCCCCccccchhhhhhhhhhhHHHH-----------------------------------HHHHHHHHHHhcCCCceE
Confidence 445789999999999999998863210 113556668999999999
Q ss_pred EEecCcCCCC
Q 017439 226 LLTPTIRDGI 235 (371)
Q Consensus 226 l~~~gr~~~~ 235 (371)
+...+..-..
T Consensus 141 vyvwa~~q~~ 150 (293)
T KOG1331|consen 141 VYVWALEQHQ 150 (293)
T ss_pred EEEehhhccC
Confidence 9998876443
|
|
| >KOG1975 consensus mRNA cap methyltransferase [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=93.62 E-value=0.076 Score=52.45 Aligned_cols=64 Identities=19% Similarity=0.296 Sum_probs=46.0
Q ss_pred CcceeeeccCCCcccccC-----CCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhh
Q 017439 132 SKKYFATGVPGSFHGRLF-----PESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKND 206 (371)
Q Consensus 132 ~~~~f~~gvpgSFy~rLf-----P~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D 206 (371)
+...|++|. +|+++|. ++-++|++=|=+|+|+-=. - ++-
T Consensus 172 f~a~f~~~D--c~~~~l~d~~e~~dp~fDivScQF~~HYaFe-t---------------------------------ee~ 215 (389)
T KOG1975|consen 172 FTAVFIAAD--CFKERLMDLLEFKDPRFDIVSCQFAFHYAFE-T---------------------------------EES 215 (389)
T ss_pred ceeEEEEec--cchhHHHHhccCCCCCcceeeeeeeEeeeec-c---------------------------------HHH
Confidence 345677776 7887653 4445999999999998111 0 112
Q ss_pred HHHHHHHHHhhcccCceEEEEecCc
Q 017439 207 IESFLNARAQELVPGGLLLLLTPTI 231 (371)
Q Consensus 207 ~~~FL~~Ra~EL~pGG~lvl~~~gr 231 (371)
...+|+.-++-|+|||.|+-+++-.
T Consensus 216 ar~~l~Nva~~LkpGG~FIgTiPds 240 (389)
T KOG1975|consen 216 ARIALRNVAKCLKPGGVFIGTIPDS 240 (389)
T ss_pred HHHHHHHHHhhcCCCcEEEEecCcH
Confidence 2347999999999999999999754
|
|
| >KOG2899 consensus Predicted methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.23 E-value=0.33 Score=46.37 Aligned_cols=23 Identities=26% Similarity=0.590 Sum_probs=20.5
Q ss_pred hhHHHHHHHHHhhcccCceEEEE
Q 017439 205 NDIESFLNARAQELVPGGLLLLL 227 (371)
Q Consensus 205 ~D~~~FL~~Ra~EL~pGG~lvl~ 227 (371)
+-+.+||+.-+.-|.|||+||+.
T Consensus 186 ~GL~~ff~kis~ll~pgGiLvvE 208 (288)
T KOG2899|consen 186 DGLRRFFRKISSLLHPGGILVVE 208 (288)
T ss_pred HHHHHHHHHHHHhhCcCcEEEEc
Confidence 56778999999999999999985
|
|
| >PRK10611 chemotaxis methyltransferase CheR; Provisional | Back alignment and domain information |
|---|
Probab=93.17 E-value=0.32 Score=47.48 Aligned_cols=44 Identities=14% Similarity=0.327 Sum_probs=26.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNN 120 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~N 120 (371)
+++||-.-|||+|-=.-.+.--+.+.... . .- .++|+..|+-.+
T Consensus 115 ~~irIWSAgCStGEEpYSlAmll~e~~~~-~----------~~---~~~I~atDIs~~ 158 (287)
T PRK10611 115 GEYRVWSAAASTGEEPYSIAMTLADTLGT-A----------PG---RWKVFASDIDTE 158 (287)
T ss_pred CCEEEEEccccCCHHHHHHHHHHHHhhcc-c----------CC---CcEEEEEECCHH
Confidence 46999999999996444333223332211 0 11 578888888664
|
|
| >PHA03412 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=92.64 E-value=0.5 Score=44.96 Aligned_cols=73 Identities=10% Similarity=0.055 Sum_probs=41.1
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCCC
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPGS 143 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpgS 143 (371)
..+|+|+|||+|..++.+. + ++.. .+ ..+|+.-|+-.+-....=+.++. .-+.. +.
T Consensus 50 ~grVLDlG~GSG~Lalala--------~-~~~~-------~~---~~~V~aVEID~~Al~~Ar~n~~~--~~~~~---~D 105 (241)
T PHA03412 50 SGSVVDLCAGIGGLSFAMV--------H-MMMY-------AK---PREIVCVELNHTYYKLGKRIVPE--ATWIN---AD 105 (241)
T ss_pred CCEEEEccChHHHHHHHHH--------H-hccc-------CC---CcEEEEEECCHHHHHHHHhhccC--CEEEE---cc
Confidence 4699999999999888766 2 2211 11 23566666665544433333321 12222 22
Q ss_pred cccccCCCCceeEEEecC
Q 017439 144 FHGRLFPESSLHVAHTSN 161 (371)
Q Consensus 144 Fy~rLfP~~Svd~~~Ss~ 161 (371)
|.... +++++|+|+|+=
T Consensus 106 ~~~~~-~~~~FDlIIsNP 122 (241)
T PHA03412 106 ALTTE-FDTLFDMAISNP 122 (241)
T ss_pred hhccc-ccCCccEEEECC
Confidence 33222 356899999973
|
|
| >PRK01581 speE spermidine synthase; Validated | Back alignment and domain information |
|---|
Probab=92.56 E-value=0.2 Score=50.57 Aligned_cols=19 Identities=16% Similarity=0.162 Sum_probs=15.8
Q ss_pred HHHHHHHhhcccCceEEEE
Q 017439 209 SFLNARAQELVPGGLLLLL 227 (371)
Q Consensus 209 ~FL~~Ra~EL~pGG~lvl~ 227 (371)
.|++.-.+-|+|||.|++.
T Consensus 249 EFy~~~~~~LkPgGV~V~Q 267 (374)
T PRK01581 249 ELFARIATFLTEDGAFVCQ 267 (374)
T ss_pred HHHHHHHHhcCCCcEEEEe
Confidence 3677777889999999887
|
|
| >smart00650 rADc Ribosomal RNA adenine dimethylases | Back alignment and domain information |
|---|
Probab=92.14 E-value=0.37 Score=42.70 Aligned_cols=20 Identities=15% Similarity=0.152 Sum_probs=17.7
Q ss_pred ceEEeeecCCCCcccHHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAMQ 83 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~ 83 (371)
.-+|+|+|||+|..|..+++
T Consensus 14 ~~~vLEiG~G~G~lt~~l~~ 33 (169)
T smart00650 14 GDTVLEIGPGKGALTEELLE 33 (169)
T ss_pred cCEEEEECCCccHHHHHHHh
Confidence 35899999999999998885
|
|
| >COG2890 HemK Methylase of polypeptide chain release factors [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=91.65 E-value=0.3 Score=47.43 Aligned_cols=23 Identities=30% Similarity=0.468 Sum_probs=18.8
Q ss_pred hHHHHHHHHHhhcccCceEEEEe
Q 017439 206 DIESFLNARAQELVPGGLLLLLT 228 (371)
Q Consensus 206 D~~~FL~~Ra~EL~pGG~lvl~~ 228 (371)
...+|+..=..-|+|||.+++..
T Consensus 216 ~~~~i~~~a~~~l~~~g~l~le~ 238 (280)
T COG2890 216 VYRRILGEAPDILKPGGVLILEI 238 (280)
T ss_pred HHHHHHHhhHHHcCCCcEEEEEE
Confidence 45568888888899999998877
|
|
| >PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes | Back alignment and domain information |
|---|
Probab=91.34 E-value=5.8 Score=37.05 Aligned_cols=26 Identities=19% Similarity=0.169 Sum_probs=18.6
Q ss_pred ccccCCHHHHHHHhhcCCceEEEEEEEe
Q 017439 273 PMYYPFLGELMGHIKRNKNFSIEIMNTF 300 (371)
Q Consensus 273 P~Y~ps~eE~~~~i~~~g~F~I~~~e~~ 300 (371)
|=|.-+.+|+++++.. .|+|+.++..
T Consensus 166 PPf~v~~~ev~~l~~~--~f~i~~l~~~ 191 (218)
T PF05724_consen 166 PPFSVTEEEVRELFGP--GFEIEELEEE 191 (218)
T ss_dssp SS----HHHHHHHHTT--TEEEEEEEEE
T ss_pred cCCCCCHHHHHHHhcC--CcEEEEEecc
Confidence 4455678999999994 6999999975
|
Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B. |
| >PF12147 Methyltransf_20: Putative methyltransferase; InterPro: IPR022744 This C-terminal region is found in bacteria and eukaryotes and is approximately 110 amino acids in length | Back alignment and domain information |
|---|
Probab=91.29 E-value=8.3 Score=37.92 Aligned_cols=60 Identities=20% Similarity=0.272 Sum_probs=38.8
Q ss_pred HHHHHHhhcccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccc--cCCHHHHHHHhh
Q 017439 210 FLNARAQELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMY--YPFLGELMGHIK 287 (371)
Q Consensus 210 FL~~Ra~EL~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y--~ps~eE~~~~i~ 287 (371)
=|+--+.-|.|||.|+.+.---- | -.+.|..+|...- +| -||- .||..|+.++++
T Consensus 231 sl~gl~~al~pgG~lIyTgQPwH---P--------Qle~IAr~LtsHr-~g-----------~~WvMRrRsq~EmD~Lv~ 287 (311)
T PF12147_consen 231 SLAGLARALEPGGYLIYTGQPWH---P--------QLEMIARVLTSHR-DG-----------KAWVMRRRSQAEMDQLVE 287 (311)
T ss_pred HHHHHHHHhCCCcEEEEcCCCCC---c--------chHHHHHHHhccc-CC-----------CceEEEecCHHHHHHHHH
Confidence 36666788999999987752110 1 1255666665321 11 1444 479999999999
Q ss_pred cCCceE
Q 017439 288 RNKNFS 293 (371)
Q Consensus 288 ~~g~F~ 293 (371)
..| |+
T Consensus 288 ~aG-F~ 292 (311)
T PF12147_consen 288 AAG-FE 292 (311)
T ss_pred HcC-Cc
Confidence 987 65
|
It is found in association with PF00561 from PFAM. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins. This domain belongs to the S-adenosyl-L-methionine-dependent methyltransferases superfamily. |
| >PF01234 NNMT_PNMT_TEMT: NNMT/PNMT/TEMT family; InterPro: IPR000940 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (AdoMet) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals | Back alignment and domain information |
|---|
Probab=91.02 E-value=0.34 Score=46.53 Aligned_cols=83 Identities=18% Similarity=0.106 Sum_probs=56.1
Q ss_pred CceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEecCc
Q 017439 152 SSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTPTI 231 (371)
Q Consensus 152 ~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~gr 231 (371)
...|.+.|+.||-=.++-++ . +.+=|++-+.-|||||.|++...-.
T Consensus 157 ~~~D~v~s~fcLE~a~~d~~--------------------------~--------y~~al~ni~~lLkpGG~Lil~~~l~ 202 (256)
T PF01234_consen 157 PKFDCVISSFCLESACKDLD--------------------------E--------YRRALRNISSLLKPGGHLILAGVLG 202 (256)
T ss_dssp SSEEEEEEESSHHHH-SSHH--------------------------H--------HHHHHHHHHTTEEEEEEEEEEEESS
T ss_pred cchhhhhhhHHHHHHcCCHH--------------------------H--------HHHHHHHHHHHcCCCcEEEEEEEcC
Confidence 36999999999987665442 2 2334778889999999999988644
Q ss_pred CCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEE
Q 017439 232 RDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNT 299 (371)
Q Consensus 232 ~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~ 299 (371)
..... + | .-.+|...-+.+.++++|++.| |+|+..+.
T Consensus 203 ~t~Y~--------------------v--G--------~~~F~~l~l~ee~v~~al~~aG-~~i~~~~~ 239 (256)
T PF01234_consen 203 STYYM--------------------V--G--------GHKFPCLPLNEEFVREALEEAG-FDIEDLEK 239 (256)
T ss_dssp -SEEE--------------------E--T--------TEEEE---B-HHHHHHHHHHTT-EEEEEEEG
T ss_pred ceeEE--------------------E--C--------CEecccccCCHHHHHHHHHHcC-CEEEeccc
Confidence 32210 0 1 1136777889999999999987 99998883
|
The reaction is catalysed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. Three classes of DNA Mtases transfer the methyl group from AdoMet to the target base to form either N-6-methyladenine, or N-4-methylcytosine, or C-5- methylcytosine. In C-5-cytosine Mtases, ten conserved motifs are arranged in the same order []. Motif I (a glycine-rich or closely related consensus sequence; FAGxGG in M.HhaI []), shared by other AdoMet-Mtases [], is part of the cofactor binding site and motif IV (PCQ) is part of the catalytic site. In contrast, sequence comparison among N-6-adenine and N-4-cytosine Mtases indicated two of the conserved segments [], although more conserved segments may be present. One of them corresponds to motif I in C-5-cytosine Mtases, and the other is named (D/N/S)PP(Y/F). Crystal structures are known for a number of Mtases [, , , ]. The cofactor binding sites are almost identical and the essential catalytic amino acids coincide. The comparable protein folding and the existence of equivalent amino acids in similar secondary and tertiary positions indicate that many (if not all) AdoMet-Mtases have a common catalytic domain structure. This permits tertiary structure prediction of other DNA, RNA, protein, and small-molecule AdoMet-Mtases from their amino acid sequences []. Several cytoplasmic vertebrate methyltransferases are evolutionary related [], including nicotinamide N-methyltransferase (2.1.1.1 from EC) (NNMT); phenylethanolamine N-methyltransferase (2.1.1.28 from EC) (PNMT); and thioether S-methyltransferase (2.1.1.96 from EC) (TEMT). NNMT catalyzes the N-methylation of nicotinamide and other pyridines to form pyridinium ions. This activity is important for the biotransformation of many drugs and xenobiotic compounds. PNMT catalyzes the last step in catecholamine biosynthesis, the conversion of noradrenalin to adrenalin; and TEMT catalyzes the methylation of dimethyl sulphide into trimethylsulphonium. These three enzymes use S-adenosyl-L-methionine as the methyl donor. They are proteins of 30 to 32 kDa.; GO: 0008168 methyltransferase activity; PDB: 2IIP_C 3ROD_A 2OBF_A 3HCA_B 2ONY_B 3KR1_A 2OPB_B 3KQP_B 2AN4_B 3KQM_A .... |
| >PF01739 CheR: CheR methyltransferase, SAM binding domain; InterPro: IPR022642 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (AdoMet) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals | Back alignment and domain information |
|---|
Probab=90.95 E-value=1.2 Score=40.93 Aligned_cols=118 Identities=20% Similarity=0.369 Sum_probs=57.7
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhh---------hhhcCCCC
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNT---------LFKSVPLS 132 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~---------lF~~l~~~ 132 (371)
.+++||-..|||+|-=.-.+.--+-+.... . .+ ..++++.+|+-..--.. -++.+|+.
T Consensus 30 ~~~lrIWSagCStGeE~YSlAmll~e~~~~-~----------~~--~~~~I~atDi~~~~L~~Ar~G~Y~~~~~~~~~~~ 96 (196)
T PF01739_consen 30 GRPLRIWSAGCSTGEEPYSLAMLLLELLPG-A----------LG--WDFRILATDISPSALEKARAGIYPERSLRGLPPA 96 (196)
T ss_dssp -S-EEEEETT-TTTHHHHHHHHHHHHHH-S------------TT---SEEEEEEES-HHHHHHHHHTEEEGGGGTTS-HH
T ss_pred CCCeEEEECCCCCChhHHHHHHHHHHHhcc-c----------CC--CceEEEEEECCHHHHHHHHhCCCCHHHHhhhHHH
Confidence 478999999999996544443333332222 0 11 15889999986532111 11223321
Q ss_pred --cceeeeccCCCcc-----------------cccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCH
Q 017439 133 --KKYFATGVPGSFH-----------------GRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEK 193 (371)
Q Consensus 133 --~~~f~~gvpgSFy-----------------~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~ 193 (371)
..||....++.|- +.-.|.+.+|+|+|-+.|-.++..-
T Consensus 97 ~~~ryf~~~~~~~~~v~~~lr~~V~F~~~NL~~~~~~~~~fD~I~CRNVlIYF~~~~----------------------- 153 (196)
T PF01739_consen 97 YLRRYFTERDGGGYRVKPELRKMVRFRRHNLLDPDPPFGRFDLIFCRNVLIYFDPET----------------------- 153 (196)
T ss_dssp HHHHHEEEE-CCCTTE-HHHHTTEEEEE--TT-S------EEEEEE-SSGGGS-HHH-----------------------
T ss_pred HHHHhccccCCCceeEChHHcCceEEEecccCCCCcccCCccEEEecCEEEEeCHHH-----------------------
Confidence 2455433332221 1234667788888888777754311
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEe
Q 017439 194 EVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLT 228 (371)
Q Consensus 194 ~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~ 228 (371)
=...++.-++-|+|||.|++--
T Consensus 154 -------------~~~vl~~l~~~L~pgG~L~lG~ 175 (196)
T PF01739_consen 154 -------------QQRVLRRLHRSLKPGGYLFLGH 175 (196)
T ss_dssp -------------HHHHHHHHGGGEEEEEEEEE-T
T ss_pred -------------HHHHHHHHHHHcCCCCEEEEec
Confidence 1235677789999999997743
|
The reaction is catalysed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. Three classes of DNA Mtases transfer the methyl group from AdoMet to the target base to form either N-6-methyladenine, or N-4-methylcytosine, or C-5- methylcytosine. In C-5-cytosine Mtases, ten conserved motifs are arranged in the same order []. Motif I (a glycine-rich or closely related consensus sequence; FAGxGG in M.HhaI []), shared by other AdoMet-Mtases [], is part of the cofactor binding site and motif IV (PCQ) is part of the catalytic site. In contrast, sequence comparison among N-6-adenine and N-4-cytosine Mtases indicated two of the conserved segments [], although more conserved segments may be present. One of them corresponds to motif I in C-5-cytosine Mtases, and the other is named (D/N/S)PP(Y/F). Crystal structures are known for a number of Mtases [, , , ]. The cofactor binding sites are almost identical and the essential catalytic amino acids coincide. The comparable protein folding and the existence of equivalent amino acids in similar secondary and tertiary positions indicate that many (if not all) AdoMet-Mtases have a common catalytic domain structure. This permits tertiary structure prediction of other DNA, RNA, protein, and small-molecule AdoMet-Mtases from their amino acid sequences []. Flagellated bacteria swim towards favourable chemicals and away from deleterious ones. Sensing of chemoeffector gradients involves chemotaxis receptors, transmembrane (TM) proteins that detect stimuli through their periplasmic domains and transduce the signals via their cytoplasmic domains []. Signalling outputs from these receptors are influenced both by the binding of the chemoeffector ligand to their periplasmic domains and by methylation of specific glutamate residues on their cytoplasmic domains. Methylation is catalysed by CheR, an S-adenosylmethionine-dependent methyltransferase [], which reversibly methylates specific glutamate residues within a coiled coil region, to form gamma-glutamyl methyl ester residues [, ]. The structure of the Salmonella typhimurium chemotaxis receptor methyltransferase CheR, bound to S-adenosylhomocysteine, has been determined to a resolution of 2.0 A []. The structure reveals CheR to be a two-domain protein, with a smaller N-terminal helical domain linked via a single polypeptide connection to a larger C-terminal alpha/beta domain. The C-terminal domain has the characteristics of a nucleotide-binding fold, with an insertion of a small anti-parallel beta-sheet subdomain. The S-adenosylhomocysteine-binding site is formed mainly by the large domain, with contributions from residues within the N-terminal domain and the linker region []. CheR proteins are part of the chemotaxis signaling mechanism which methylates the chemotaxis receptor at specific glutamate residues. This entry refers to the C-terminal SAM-binding domain of the CherR-type MCP methyltransferases, which are found in bacteria, archaea and green plants. This entry is found in association with PF03705 from PFAM. ; PDB: 1AF7_A 1BC5_A. |
| >COG0220 Predicted S-adenosylmethionine-dependent methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.98 E-value=1.2 Score=42.07 Aligned_cols=112 Identities=22% Similarity=0.313 Sum_probs=65.4
Q ss_pred eEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC-Cc-ce-eeeccC
Q 017439 65 FKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL-SK-KY-FATGVP 141 (371)
Q Consensus 65 ~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~-~~-~~-f~~gvp 141 (371)
-.++|+|||.|.-.+.... + .| ++-++--+.-.+--..+-+.+.. .- ++ .+.+..
T Consensus 50 pi~lEIGfG~G~~l~~~A~-------~------------nP---~~nfiGiEi~~~~v~~~l~k~~~~~l~Nlri~~~DA 107 (227)
T COG0220 50 PIVLEIGFGMGEFLVEMAK-------K------------NP---EKNFLGIEIRVPGVAKALKKIKELGLKNLRLLCGDA 107 (227)
T ss_pred cEEEEECCCCCHHHHHHHH-------H------------CC---CCCEEEEEEehHHHHHHHHHHHHcCCCcEEEEcCCH
Confidence 5899999999987776552 1 22 32333333322222222222210 11 22 333444
Q ss_pred CCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccC
Q 017439 142 GSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPG 221 (371)
Q Consensus 142 gSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 221 (371)
--+...++|++|+|=++-++.=-| |+.-- +|.++. .++ ||+.=++-|+||
T Consensus 108 ~~~l~~~~~~~sl~~I~i~FPDPW----pKkRH-------~KRRl~----~~~---------------fl~~~a~~Lk~g 157 (227)
T COG0220 108 VEVLDYLIPDGSLDKIYINFPDPW----PKKRH-------HKRRLT----QPE---------------FLKLYARKLKPG 157 (227)
T ss_pred HHHHHhcCCCCCeeEEEEECCCCC----CCccc-------cccccC----CHH---------------HHHHHHHHccCC
Confidence 445677788889999999998888 54321 122221 222 777778999999
Q ss_pred ceEEEEe
Q 017439 222 GLLLLLT 228 (371)
Q Consensus 222 G~lvl~~ 228 (371)
|.+.+.+
T Consensus 158 G~l~~aT 164 (227)
T COG0220 158 GVLHFAT 164 (227)
T ss_pred CEEEEEe
Confidence 9998876
|
|
| >PRK13256 thiopurine S-methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=89.59 E-value=8.4 Score=36.34 Aligned_cols=21 Identities=5% Similarity=0.004 Sum_probs=18.1
Q ss_pred CceEEeeecCCCCcccHHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAMQ 83 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~ 83 (371)
..-||++-|||.|.+..-+.+
T Consensus 43 ~~~rvLvPgCGkg~D~~~LA~ 63 (226)
T PRK13256 43 DSSVCLIPMCGCSIDMLFFLS 63 (226)
T ss_pred CCCeEEEeCCCChHHHHHHHh
Confidence 346999999999999998873
|
|
| >PLN02672 methionine S-methyltransferase | Back alignment and domain information |
|---|
Probab=89.19 E-value=0.9 Score=51.88 Aligned_cols=24 Identities=8% Similarity=0.144 Sum_probs=19.4
Q ss_pred HHHHHHHHhhcccCceEEEEecCc
Q 017439 208 ESFLNARAQELVPGGLLLLLTPTI 231 (371)
Q Consensus 208 ~~FL~~Ra~EL~pGG~lvl~~~gr 231 (371)
.+++..-.+-|+|||.|++.+.++
T Consensus 258 r~i~~~a~~~L~pgG~l~lEiG~~ 281 (1082)
T PLN02672 258 ARAVEEGISVIKPMGIMIFNMGGR 281 (1082)
T ss_pred HHHHHHHHHhccCCCEEEEEECcc
Confidence 456777778999999999999754
|
|
| >PF10294 Methyltransf_16: Putative methyltransferase; InterPro: IPR019410 There are a number of unidentified genes that have a high probability of coding for methyltransferases | Back alignment and domain information |
|---|
Probab=88.76 E-value=0.61 Score=41.80 Aligned_cols=110 Identities=20% Similarity=0.216 Sum_probs=53.5
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCC-----ccee
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLS-----KKYF 136 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~-----~~~f 136 (371)
.+..+|++||||+|--++.+. +.. . .-.|+++|++. =-..+=..+... .++-
T Consensus 44 ~~~~~VLELGaG~Gl~gi~~a----------~~~--------~----~~~Vv~TD~~~-~l~~l~~Ni~~N~~~~~~~v~ 100 (173)
T PF10294_consen 44 FRGKRVLELGAGTGLPGIAAA----------KLF--------G----AARVVLTDYNE-VLELLRRNIELNGSLLDGRVS 100 (173)
T ss_dssp TTTSEEEETT-TTSHHHHHHH----------HT---------T-----SEEEEEE-S--HHHHHHHHHHTT--------E
T ss_pred cCCceEEEECCccchhHHHHH----------hcc--------C----CceEEEeccch-hhHHHHHHHHhcccccccccc
Confidence 356799999999998888777 221 0 12688999876 222222222111 1111
Q ss_pred --eeccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHH
Q 017439 137 --ATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNAR 214 (371)
Q Consensus 137 --~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~R 214 (371)
..-.+.......+.++++|+++.+=++.+ + +.+..+++.-
T Consensus 101 v~~L~Wg~~~~~~~~~~~~~D~IlasDv~Y~----~----------------------------------~~~~~L~~tl 142 (173)
T PF10294_consen 101 VRPLDWGDELDSDLLEPHSFDVILASDVLYD----E----------------------------------ELFEPLVRTL 142 (173)
T ss_dssp EEE--TTS-HHHHHHS-SSBSEEEEES--S-----G----------------------------------GGHHHHHHHH
T ss_pred CcEEEecCcccccccccccCCEEEEecccch----H----------------------------------HHHHHHHHHH
Confidence 11111112223334455666665555554 1 3334467777
Q ss_pred HhhcccCceEEEEecCcC
Q 017439 215 AQELVPGGLLLLLTPTIR 232 (371)
Q Consensus 215 a~EL~pGG~lvl~~~gr~ 232 (371)
..-|+++|.+++...-|.
T Consensus 143 ~~ll~~~~~vl~~~~~R~ 160 (173)
T PF10294_consen 143 KRLLKPNGKVLLAYKRRR 160 (173)
T ss_dssp HHHBTT-TTEEEEEE-S-
T ss_pred HHHhCCCCEEEEEeCEec
Confidence 788999999777766664
|
They make up approximately 0.6-1.6% of the genes in the yeast, human, mouse, Drosophila melanogaster, Caenorhabditis elegans, Arabidopsis thaliana, and Escherichia coli genomes []. This entry represents putative nicotinamide N-methyltransferases involved in rDNA silencing and in lifespan determination. ; PDB: 3BZB_A. |
| >TIGR03439 methyl_EasF probable methyltransferase domain, EasF family | Back alignment and domain information |
|---|
Probab=88.36 E-value=2.7 Score=41.67 Aligned_cols=119 Identities=19% Similarity=0.329 Sum_probs=66.3
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC-C-Ccceeeecc
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP-L-SKKYFATGV 140 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~-~-~~~~f~~gv 140 (371)
...+|+|||||+|.=|..+++.+. . +- . .+..+--|+-..--....+.|. . .+.+=+.|+
T Consensus 76 ~~~~lIELGsG~~~Kt~~LL~aL~----~-~~---------~----~~~Y~plDIS~~~L~~a~~~L~~~~~p~l~v~~l 137 (319)
T TIGR03439 76 SGSMLVELGSGNLRKVGILLEALE----R-QK---------K----SVDYYALDVSRSELQRTLAELPLGNFSHVRCAGL 137 (319)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH----h-cC---------C----CceEEEEECCHHHHHHHHHhhhhccCCCeEEEEE
Confidence 345899999999999988885543 2 10 1 3467777777655555555555 2 233445555
Q ss_pred CCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceee-----cCCCHHHHHHHHHHHHhhHHHHHHHHH
Q 017439 141 PGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILC-----SGFEKEVAEAYSAQFKNDIESFLNARA 215 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~-----~~~~~~~~~ay~~Q~~~D~~~FL~~Ra 215 (371)
-|.|.. .++||.+ |.. .. ++..++. .+-+|+.. ..||+.-+
T Consensus 138 ~gdy~~---------------~l~~l~~-~~~-~~------~~r~~~flGSsiGNf~~~ea-----------~~fL~~~~ 183 (319)
T TIGR03439 138 LGTYDD---------------GLAWLKR-PEN-RS------RPTTILWLGSSIGNFSRPEA-----------AAFLAGFL 183 (319)
T ss_pred EecHHH---------------HHhhccc-ccc-cC------CccEEEEeCccccCCCHHHH-----------HHHHHHHH
Confidence 555533 4556533 100 00 0111221 12233322 23666666
Q ss_pred h-hcccCceEEEEecCcCC
Q 017439 216 Q-ELVPGGLLLLLTPTIRD 233 (371)
Q Consensus 216 ~-EL~pGG~lvl~~~gr~~ 233 (371)
+ -|.|||.|++-+=+.++
T Consensus 184 ~~~l~~~d~lLiG~D~~k~ 202 (319)
T TIGR03439 184 ATALSPSDSFLIGLDGCKD 202 (319)
T ss_pred HhhCCCCCEEEEecCCCCC
Confidence 6 89999999998854443
|
This model represents an uncharacterized domain of about 300 amino acids with homology to S-adenosylmethionine-dependent methyltransferases. Proteins with this domain are exclusively fungal. A few, such as EasF from Neotyphodium lolii, are associated with the biosynthesis of ergot alkaloids, a class of fungal secondary metabolites. EasF may, in fact, be the AdoMet:dimethylallyltryptophan N-methyltransferase, the enzyme that follows tryptophan dimethylallyltransferase (DMATS) in ergot alkaloid biosynthesis. Several other members of this family, including mug158 (meiotically up-regulated gene 158 protein) from Schizosaccharomyces pombe, contain an additional uncharacterized domain DUF323 (pfam03781). |
| >KOG1499 consensus Protein arginine N-methyltransferase PRMT1 and related enzymes [Posttranslational modification, protein turnover, chaperones; Transcription; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=88.30 E-value=1.1 Score=44.66 Aligned_cols=46 Identities=22% Similarity=0.251 Sum_probs=33.7
Q ss_pred ccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceE
Q 017439 145 HGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLL 224 (371)
Q Consensus 145 y~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~l 224 (371)
-+-.+|...+|+++|-|-=+||-. +.=+...|-+|-+=|+|||.+
T Consensus 119 Edi~LP~eKVDiIvSEWMGy~Ll~-----------------------------------EsMldsVl~ARdkwL~~~G~i 163 (346)
T KOG1499|consen 119 EDIELPVEKVDIIVSEWMGYFLLY-----------------------------------ESMLDSVLYARDKWLKEGGLI 163 (346)
T ss_pred EEEecCccceeEEeehhhhHHHHH-----------------------------------hhhhhhhhhhhhhccCCCceE
Confidence 334567788999999877666432 233455788999999999998
Q ss_pred E
Q 017439 225 L 225 (371)
Q Consensus 225 v 225 (371)
+
T Consensus 164 ~ 164 (346)
T KOG1499|consen 164 Y 164 (346)
T ss_pred c
Confidence 5
|
|
| >PRK00274 ksgA 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein; Reviewed | Back alignment and domain information |
|---|
Probab=87.96 E-value=0.64 Score=44.73 Aligned_cols=20 Identities=15% Similarity=0.142 Sum_probs=17.9
Q ss_pred ceEEeeecCCCCcccHHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAMQ 83 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~ 83 (371)
.-+|+|+|||+|..|..+..
T Consensus 43 ~~~VLEiG~G~G~lt~~L~~ 62 (272)
T PRK00274 43 GDNVLEIGPGLGALTEPLLE 62 (272)
T ss_pred cCeEEEeCCCccHHHHHHHH
Confidence 46899999999999998886
|
|
| >PF08123 DOT1: Histone methylation protein DOT1 ; InterPro: IPR013110 The DOT1 domain regulates gene expression by methylating histone H3 [] | Back alignment and domain information |
|---|
Probab=87.37 E-value=2.4 Score=39.34 Aligned_cols=24 Identities=29% Similarity=0.434 Sum_probs=15.8
Q ss_pred HHhhHHHHHHHHHhhcccCceEEE
Q 017439 203 FKNDIESFLNARAQELVPGGLLLL 226 (371)
Q Consensus 203 ~~~D~~~FL~~Ra~EL~pGG~lvl 226 (371)
|..|+..-|..+..+|++|-++|.
T Consensus 133 F~~~l~~~L~~~~~~lk~G~~IIs 156 (205)
T PF08123_consen 133 FDPDLNLALAELLLELKPGARIIS 156 (205)
T ss_dssp T-HHHHHHHHHHHTTS-TT-EEEE
T ss_pred cCHHHHHHHHHHHhcCCCCCEEEE
Confidence 335666678889999999877654
|
H3 methylation by DOT1 has been shown to be required for the DNA damage checkpoint in yeast [].; GO: 0018024 histone-lysine N-methyltransferase activity; PDB: 4ER3_A 4ER6_A 4EQZ_A 1NW3_A 3UWP_A 4ER5_A 3QOX_A 3SX0_A 4ER7_A 3SR4_A .... |
| >PRK15128 23S rRNA m(5)C1962 methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=87.34 E-value=11 Score=38.63 Aligned_cols=26 Identities=27% Similarity=0.322 Sum_probs=20.2
Q ss_pred HHhhHHHHHHHHHhhcccCceEEEEe
Q 017439 203 FKNDIESFLNARAQELVPGGLLLLLT 228 (371)
Q Consensus 203 ~~~D~~~FL~~Ra~EL~pGG~lvl~~ 228 (371)
..+++..+++.=.+-|+|||.+++..
T Consensus 314 ~~~~y~~l~~~a~~lLk~gG~lv~~s 339 (396)
T PRK15128 314 ACRGYKDINMLAIQLLNPGGILLTFS 339 (396)
T ss_pred HHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 34567777777778899999998765
|
|
| >KOG1271 consensus Methyltransferases [General function prediction only] | Back alignment and domain information |
|---|
Probab=86.71 E-value=7.9 Score=35.73 Aligned_cols=18 Identities=28% Similarity=0.486 Sum_probs=14.5
Q ss_pred EEeeecCCCCcccHHHHH
Q 017439 66 KIADLGCSTGPNTFIAMQ 83 (371)
Q Consensus 66 ~IaDlGCs~G~Ns~~~~~ 83 (371)
+|+|||||-|..-+.+.+
T Consensus 70 ~VlDLGtGNG~~L~~L~~ 87 (227)
T KOG1271|consen 70 RVLDLGTGNGHLLFQLAK 87 (227)
T ss_pred ceeeccCCchHHHHHHHH
Confidence 999999999976665553
|
|
| >PLN02781 Probable caffeoyl-CoA O-methyltransferase | Back alignment and domain information |
|---|
Probab=86.63 E-value=2.4 Score=39.87 Aligned_cols=21 Identities=14% Similarity=0.192 Sum_probs=17.8
Q ss_pred CCceEEeeecCCCCcccHHHH
Q 017439 62 SSTFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~ 82 (371)
.++-+|+|+||++|.-++.+.
T Consensus 67 ~~~~~vLEiGt~~G~s~l~la 87 (234)
T PLN02781 67 MNAKNTLEIGVFTGYSLLTTA 87 (234)
T ss_pred hCCCEEEEecCcccHHHHHHH
Confidence 346799999999999888776
|
|
| >COG1352 CheR Methylase of chemotaxis methyl-accepting proteins [Cell motility and secretion / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=86.54 E-value=9.9 Score=36.81 Aligned_cols=69 Identities=22% Similarity=0.424 Sum_probs=41.1
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchh----------hhhhcCCCC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFN----------TLFKSVPLS 132 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn----------~lF~~l~~~ 132 (371)
+++||--.|||||-=.-.+.-.+.++... . . .. .++|+.+|+-..--. .+++.+|..
T Consensus 96 ~~irIWSaaCStGEEpYSiAm~l~e~~~~-----~---~--~~---~~~I~AtDId~~~L~~A~~G~Y~~~~~~~~~~~~ 162 (268)
T COG1352 96 RPIRIWSAACSTGEEPYSLAMLLLEALGK-----L---A--GF---RVKILATDIDLSVLEKARAGIYPSRELLRGLPPE 162 (268)
T ss_pred CceEEEecCcCCCccHHHHHHHHHHHhcc-----c---c--CC---ceEEEEEECCHHHHHHHhcCCCChhHhhccCCHH
Confidence 69999999999997655544333333321 0 0 23 689999998654322 222333322
Q ss_pred --cceeeeccCCCc
Q 017439 133 --KKYFATGVPGSF 144 (371)
Q Consensus 133 --~~~f~~gvpgSF 144 (371)
++||.-+.+|+|
T Consensus 163 ~~~ryF~~~~~~~y 176 (268)
T COG1352 163 LLRRYFERGGDGSY 176 (268)
T ss_pred HHhhhEeecCCCcE
Confidence 367777766644
|
|
| >PRK11783 rlmL 23S rRNA m(2)G2445 methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=85.57 E-value=3.8 Score=44.90 Aligned_cols=19 Identities=21% Similarity=0.090 Sum_probs=17.3
Q ss_pred eEEeeecCCCCcccHHHHH
Q 017439 65 FKIADLGCSTGPNTFIAMQ 83 (371)
Q Consensus 65 ~~IaDlGCs~G~Ns~~~~~ 83 (371)
-+|+|+||++|..|+.+..
T Consensus 540 ~rVLDlf~gtG~~sl~aa~ 558 (702)
T PRK11783 540 KDFLNLFAYTGTASVHAAL 558 (702)
T ss_pred CeEEEcCCCCCHHHHHHHH
Confidence 5899999999999998884
|
|
| >PRK13168 rumA 23S rRNA m(5)U1939 methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=84.29 E-value=3 Score=43.00 Aligned_cols=20 Identities=25% Similarity=0.288 Sum_probs=17.2
Q ss_pred ceEEeeecCCCCcccHHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAMQ 83 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~ 83 (371)
.-+|+|+|||+|..|+.+..
T Consensus 298 ~~~VLDlgcGtG~~sl~la~ 317 (443)
T PRK13168 298 GDRVLDLFCGLGNFTLPLAR 317 (443)
T ss_pred CCEEEEEeccCCHHHHHHHH
Confidence 36899999999999988764
|
|
| >PRK03522 rumB 23S rRNA methyluridine methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=82.47 E-value=3.6 Score=40.40 Aligned_cols=20 Identities=20% Similarity=0.197 Sum_probs=17.5
Q ss_pred ceEEeeecCCCCcccHHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAMQ 83 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~ 83 (371)
.-+|+|+|||+|..|+.+.+
T Consensus 174 ~~~VLDl~cG~G~~sl~la~ 193 (315)
T PRK03522 174 PRSMWDLFCGVGGFGLHCAT 193 (315)
T ss_pred CCEEEEccCCCCHHHHHHHh
Confidence 36899999999999988874
|
|
| >PTZ00338 dimethyladenosine transferase-like protein; Provisional | Back alignment and domain information |
|---|
Probab=82.20 E-value=1.5 Score=42.92 Aligned_cols=50 Identities=18% Similarity=0.283 Sum_probs=33.4
Q ss_pred ceEEeeecCCCCcccHHHHH------------HHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCc
Q 017439 64 TFKIADLGCSTGPNTFIAMQ------------NIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNND 121 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~------------~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~ND 121 (371)
.-+|+|+|||.|..|..++. ..++.+++ ++...+ . .+ .++++..|....|
T Consensus 37 ~~~VLEIG~G~G~LT~~Ll~~~~~V~avEiD~~li~~l~~-~~~~~~--~--~~---~v~ii~~Dal~~~ 98 (294)
T PTZ00338 37 TDTVLEIGPGTGNLTEKLLQLAKKVIAIEIDPRMVAELKK-RFQNSP--L--AS---KLEVIEGDALKTE 98 (294)
T ss_pred cCEEEEecCchHHHHHHHHHhCCcEEEEECCHHHHHHHHH-HHHhcC--C--CC---cEEEEECCHhhhc
Confidence 45899999999999998886 34555555 443211 0 12 5778888776554
|
|
| >PF07942 N2227: N2227-like protein; InterPro: IPR012901 This family features sequences that are similar to a region of hypothetical yeast gene product N2227 (P53934 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=81.97 E-value=16 Score=35.42 Aligned_cols=23 Identities=26% Similarity=0.213 Sum_probs=20.4
Q ss_pred cCCHHHHHHHhhcCCceEEEEEEE
Q 017439 276 YPFLGELMGHIKRNKNFSIEIMNT 299 (371)
Q Consensus 276 ~ps~eE~~~~i~~~g~F~I~~~e~ 299 (371)
-.|.||++++++.-| |+++.-+.
T Consensus 220 eLs~eEi~~l~~~~G-F~~~~~~~ 242 (270)
T PF07942_consen 220 ELSLEEIKELIEKLG-FEIEKEES 242 (270)
T ss_pred CCCHHHHHHHHHHCC-CEEEEEEE
Confidence 678999999999987 99988776
|
This is thought to be expressed during meiosis and may be involved in the defence response to stressful conditions []. |
| >PRK11727 23S rRNA mA1618 methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=81.82 E-value=3.4 Score=41.04 Aligned_cols=21 Identities=10% Similarity=0.146 Sum_probs=15.8
Q ss_pred CCceEEeeecCCCCcccHHHH
Q 017439 62 SSTFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~ 82 (371)
....+|+|+|||+|.-...+.
T Consensus 113 ~~~~~vLDIGtGag~I~~lLa 133 (321)
T PRK11727 113 GANVRVLDIGVGANCIYPLIG 133 (321)
T ss_pred CCCceEEEecCCccHHHHHHH
Confidence 356899999999996555543
|
|
| >TIGR00755 ksgA dimethyladenosine transferase | Back alignment and domain information |
|---|
Probab=80.72 E-value=5.2 Score=37.83 Aligned_cols=21 Identities=14% Similarity=0.096 Sum_probs=18.3
Q ss_pred CceEEeeecCCCCcccHHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAMQ 83 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~ 83 (371)
..-+|+|+|||+|..|..+.+
T Consensus 29 ~~~~VLEiG~G~G~lt~~L~~ 49 (253)
T TIGR00755 29 EGDVVLEIGPGLGALTEPLLK 49 (253)
T ss_pred CcCEEEEeCCCCCHHHHHHHH
Confidence 356899999999999998875
|
Alternate name: S-adenosylmethionine--6-N',N'-adenosyl (rRNA) dimethyltransferase |
| >PRK14896 ksgA 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein; Provisional | Back alignment and domain information |
|---|
Probab=80.23 E-value=4.8 Score=38.32 Aligned_cols=20 Identities=15% Similarity=0.069 Sum_probs=18.0
Q ss_pred ceEEeeecCCCCcccHHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAMQ 83 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~ 83 (371)
.-+|+|+|||+|..|..+..
T Consensus 30 ~~~VLEIG~G~G~lt~~L~~ 49 (258)
T PRK14896 30 GDPVLEIGPGKGALTDELAK 49 (258)
T ss_pred cCeEEEEeCccCHHHHHHHH
Confidence 46899999999999999885
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 371 | ||||
| 1m6e_X | 359 | Crystal Structure Of Salicylic Acid Carboxyl Methyl | 3e-41 | ||
| 2eg5_A | 372 | The Structure Of Xanthosine Methyltransferase Lengt | 4e-39 | ||
| 3b5i_A | 374 | Crystal Structure Of Indole-3-Acetic Acid Methyltra | 1e-36 | ||
| 2efj_A | 384 | The Structure Of 1,7 Dimethylxanthine Methyltransfe | 2e-35 |
| >pdb|1M6E|X Chain X, Crystal Structure Of Salicylic Acid Carboxyl Methyltransferase (Samt) Length = 359 | Back alignment and structure |
|
| >pdb|2EG5|A Chain A, The Structure Of Xanthosine Methyltransferase Length = 372 | Back alignment and structure |
|
| >pdb|3B5I|A Chain A, Crystal Structure Of Indole-3-Acetic Acid Methyltransferase Length = 374 | Back alignment and structure |
|
| >pdb|2EFJ|A Chain A, The Structure Of 1,7 Dimethylxanthine Methyltransferase Length = 384 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana} Length = 374 | Back alignment and structure |
|---|
Score = 263 bits (673), Expect = 9e-86
Identities = 103/366 (28%), Positives = 164/366 (44%), Gaps = 33/366 (9%)
Query: 13 EAYPMVGGDGPHSYAKNSIYQEAIVNGSKGMIAAGIRKTLDLKSLRLDTSSTFKIADLGC 72
M GG G SYA NS+ Q ++ + ++ + F DLGC
Sbjct: 5 RLLSMKGGKGQDSYANNSLAQAMHARSMLHLLEETLE---NVHLNSSASPPPFTAVDLGC 61
Query: 73 STGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP-- 130
S+G NT + I++ I + EF FF+D +NDFNTLF+ +P
Sbjct: 62 SSGANTVHIIDFIVKHIS-------KRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPL 114
Query: 131 -------------LSKKYFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSN 177
++ YF GVPGSF+ RLFP ++ H++ +L WLS++P+ +T+
Sbjct: 115 VSNTCMEECLAADGNRSYFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRR 174
Query: 178 SPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTPTIRDGIPM 237
S A+NRG + G ++ AY QF+ D+ FL ARA E+ GG + L+ P
Sbjct: 175 SAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARAAEVKRGGAMFLVCLGRTSVDPT 234
Query: 238 FSTPEGTNF-DYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEI 296
G F + DL GL+A EK D FN+P+Y P L + + N +F+I+
Sbjct: 235 DQGGAGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIPVYAPSLQDFKEVVDANGSFAIDK 294
Query: 297 MNTFTHPLVHMVY-------SAEFWASLSRAAFGGLVGQHFGYQFVDRIFNYYSTKLAEN 349
+ + +V +AS R+ G LV H G + +++F+ ++ +
Sbjct: 295 LVVYKGGSPLVVNEPDDASEVGRAFASSCRSVAGVLVEAHIGEELSNKLFSRVESRATSH 354
Query: 350 MSSICD 355
+
Sbjct: 355 AKDVLV 360
|
| >2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A* Length = 384 | Back alignment and structure |
|---|
Score = 256 bits (655), Expect = 6e-83
Identities = 104/391 (26%), Positives = 172/391 (43%), Gaps = 49/391 (12%)
Query: 13 EAYPMVGGDGPHSYAKNSIYQEAIVNGSKGMIAAGIRKTLDLKSLRLDTSSTFKIADLGC 72
E M GG+G SYAKNS Y ++ K ++ I++ L + + + FK+ DLGC
Sbjct: 5 EVLHMNGGEGDTSYAKNSSYNLFLIR-VKPVLEQCIQELLR--ANLPNINKCFKVGDLGC 61
Query: 73 STGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLS 132
++GPNTF +++I+++I+ + + + Q+F ND NDFN++FK +P
Sbjct: 62 ASGPNTFSTVRDIVQSID-----KVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSF 116
Query: 133 KK------------YFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPA 180
+ +PGSF+ RLFPE S+H H+ L WLS++P + +
Sbjct: 117 YRNLEKENGRKIGSCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGIS 176
Query: 181 WNRGHI-LCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTPTIRDGIPMFS 239
N+G I + +AY QF D +FL ++EL+ G +LL D
Sbjct: 177 VNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHSEELISRGRMLLTFICKED-----E 231
Query: 240 TPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNT 299
+ D L + DL G + EEK+DSFNVP+Y P E+ ++ +F I + T
Sbjct: 232 FDHPNSMDLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEILYLET 291
Query: 300 FTHPLVHMVY-------------------SAEFWASLSRAAFGGLVGQHFGYQFVDRIFN 340
F P A AS+ R+ + ++ HFG + + +
Sbjct: 292 FNAPYDAGFSIDDDYQGRSHSPVSCDEHARAAHVASVVRSIYEPILASHFGEAILPDLSH 351
Query: 341 YYSTKLAENMSSICDGKTQDKIELFVLLRRN 371
+ A+ + S + + L +
Sbjct: 352 RIAKNAAKVLRS----GKGFYDSVIISLAKK 378
|
| >1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35 Length = 359 | Back alignment and structure |
|---|
Score = 255 bits (653), Expect = 7e-83
Identities = 114/369 (30%), Positives = 172/369 (46%), Gaps = 34/369 (9%)
Query: 16 PMVGGDGPHSYAKNSIYQEAIVNGSKGMIAAGIRKTLDLKSLRLDTSSTFKIADLGCSTG 75
M GG G +SYA NS Q +++ +K + A I ++ ++ IADLGCS+G
Sbjct: 8 HMKGGAGENSYAMNSFIQRQVISITKPITEAAITALYSGDTV----TTRLAIADLGCSSG 63
Query: 76 PNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKK- 134
PN A+ +I+ +E + + + E+Q+F ND NDFN +F+S+P+
Sbjct: 64 PNALFAVTELIKTVE------ELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDV 117
Query: 135 ---YFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGF 191
F GVPGSF+GRLFP ++LH H+S +L WLS++P I ++ + +
Sbjct: 118 DGVCFINGVPGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYM-----ANTC 172
Query: 192 EKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGS 251
+ V AY QF+ D FL RAQE+VPGG ++L R ST + L
Sbjct: 173 PQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTIL-GRRSEDRASTECCLIWQLLAM 231
Query: 252 CLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFTHPLVHMV--- 308
L + + GLI EEK+D FN+P Y P E+ I + +F I+ +
Sbjct: 232 ALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIEASEIYWSSCTKDG 291
Query: 309 -------YSAEFWASLSRAAFGGLVGQHFGYQFVDRIFNYYSTKLAENMSSICDGKTQDK 361
A RA L+ HFG ++ +F+ Y + E MS +
Sbjct: 292 DGGGSVEEEGYNVARCMRAVAEPLLLDHFGEAIIEDVFHRYKLLIIERMS----KEKTKF 347
Query: 362 IELFVLLRR 370
I + V L R
Sbjct: 348 INVIVSLIR 356
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 371 | |||
| 1m6e_X | 359 | S-adenosyl-L-methionnine:salicylic acid carboxyl m | 100.0 | |
| 2efj_A | 384 | 3,7-dimethylxanthine methyltransferase; SAM-depend | 100.0 | |
| 3b5i_A | 374 | S-adenosyl-L-methionine:salicylic acid carboxyl me | 100.0 | |
| 3ccf_A | 279 | Cyclopropane-fatty-acyl-phospholipid synthase; YP_ | 99.52 | |
| 2p35_A | 259 | Trans-aconitate 2-methyltransferase; SAM dependent | 99.45 | |
| 2yqz_A | 263 | Hypothetical protein TTHA0223; RNA methyltransfera | 99.44 | |
| 3bus_A | 273 | REBM, methyltransferase; rebeccamycin synthesis; H | 99.2 | |
| 3dtn_A | 234 | Putative methyltransferase MM_2633; structural gen | 99.16 | |
| 3hem_A | 302 | Cyclopropane-fatty-acyl-phospholipid synthase 2; p | 99.06 | |
| 3f4k_A | 257 | Putative methyltransferase; structural genomics, P | 99.05 | |
| 1vl5_A | 260 | Unknown conserved protein BH2331; putative methylt | 99.04 | |
| 1xxl_A | 239 | YCGJ protein; structural genomics, protein structu | 99.01 | |
| 3ujc_A | 266 | Phosphoethanolamine N-methyltransferase; parasite; | 99.0 | |
| 1kpg_A | 287 | CFA synthase;, cyclopropane-fatty-acyl-phospholipi | 98.98 | |
| 3hnr_A | 220 | Probable methyltransferase BT9727_4108; structural | 98.94 | |
| 3h2b_A | 203 | SAM-dependent methyltransferase; alpha-beta protei | 98.93 | |
| 3mgg_A | 276 | Methyltransferase; NYSGXRC, PSI-II, protein struct | 98.93 | |
| 3kkz_A | 267 | Uncharacterized protein Q5LES9; putative methyltra | 98.92 | |
| 3lcc_A | 235 | Putative methyl chloride transferase; halide methy | 98.9 | |
| 2o57_A | 297 | Putative sarcosine dimethylglycine methyltransfera | 98.9 | |
| 2aot_A | 292 | HMT, histamine N-methyltransferase; classic methyl | 98.87 | |
| 3sm3_A | 235 | SAM-dependent methyltransferases; NESG, structural | 98.87 | |
| 4hg2_A | 257 | Methyltransferase type 11; structural genomics, PS | 98.86 | |
| 3ou2_A | 218 | SAM-dependent methyltransferase; O-methyltransfera | 98.85 | |
| 4htf_A | 285 | S-adenosylmethionine-dependent methyltransferase; | 98.85 | |
| 2p7i_A | 250 | Hypothetical protein; putative methyltransferase, | 98.82 | |
| 4gek_A | 261 | TRNA (CMO5U34)-methyltransferase; structural genom | 98.8 | |
| 3g5l_A | 253 | Putative S-adenosylmethionine dependent methyltran | 98.77 | |
| 1ri5_A | 298 | MRNA capping enzyme; methyltransferase, M7G, messe | 98.76 | |
| 3e23_A | 211 | Uncharacterized protein RPA2492; alpha-beta protei | 98.75 | |
| 3dli_A | 240 | Methyltransferase; PSI-II, NYSGXRC, structural gen | 98.75 | |
| 3dlc_A | 219 | Putative S-adenosyl-L-methionine-dependent methylt | 98.75 | |
| 1pjz_A | 203 | Thiopurine S-methyltransferase; polymorphism, S-ad | 98.75 | |
| 2fk8_A | 318 | Methoxy mycolic acid synthase 4; S-adenosylmethion | 98.75 | |
| 3e8s_A | 227 | Putative SAM dependent methyltransferase; NP_74470 | 98.74 | |
| 1xtp_A | 254 | LMAJ004091AAA; SGPP, structural genomics, PSI, pro | 98.74 | |
| 3bkx_A | 275 | SAM-dependent methyltransferase; YP_807781.1, cycl | 98.74 | |
| 3l8d_A | 242 | Methyltransferase; structural genomics, PSI, nysgr | 98.73 | |
| 2a14_A | 263 | Indolethylamine N-methyltransferase; SGC,INMT, str | 98.72 | |
| 1nkv_A | 256 | Hypothetical protein YJHP; structural genomics, PS | 98.72 | |
| 3cc8_A | 230 | Putative methyltransferase; structural genomics, j | 98.7 | |
| 1vlm_A | 219 | SAM-dependent methyltransferase; possible histamin | 98.7 | |
| 2gb4_A | 252 | Thiopurine S-methyltransferase; 18204406, thiopuri | 98.68 | |
| 2vdw_A | 302 | Vaccinia virus capping enzyme D1 subunit; nucleoti | 98.68 | |
| 3ege_A | 261 | Putative methyltransferase from antibiotic biosyn | 98.68 | |
| 2g72_A | 289 | Phenylethanolamine N-methyltransferase; HET: SAM F | 98.68 | |
| 3dh0_A | 219 | SAM dependent methyltransferase; cystal structure, | 98.67 | |
| 3bgv_A | 313 | MRNA CAP guanine-N7 methyltransferase; alternative | 98.66 | |
| 3vc1_A | 312 | Geranyl diphosphate 2-C-methyltransferase; rossman | 98.66 | |
| 3lst_A | 348 | CALO1 methyltransferase; calicheamicin, enediyne, | 98.64 | |
| 3g5t_A | 299 | Trans-aconitate 3-methyltransferase; structural ge | 98.63 | |
| 3bkw_A | 243 | MLL3908 protein, S-adenosylmethionine dependent me | 98.6 | |
| 3mcz_A | 352 | O-methyltransferase; adomet_mtases, S-adenosylmeth | 98.6 | |
| 2ex4_A | 241 | Adrenal gland protein AD-003; methyltransferase, s | 98.59 | |
| 4a6d_A | 353 | Hydroxyindole O-methyltransferase; melatonin, circ | 98.56 | |
| 3ocj_A | 305 | Putative exported protein; structural genomics, PS | 98.56 | |
| 3gwz_A | 369 | MMCR; methyltransferase, mitomycin, S-adenosyl met | 98.56 | |
| 4e2x_A | 416 | TCAB9; kijanose, tetronitrose, tetradeoxy sugar, s | 98.55 | |
| 3gu3_A | 284 | Methyltransferase; alpha-beta protein, structural | 98.55 | |
| 3g2m_A | 299 | PCZA361.24; SAM-dependent methyltransferase, glyco | 98.54 | |
| 3reo_A | 368 | (ISO)eugenol O-methyltransferase; directed evoluti | 98.54 | |
| 2r3s_A | 335 | Uncharacterized protein; methyltransferase domain, | 98.51 | |
| 2i62_A | 265 | Nicotinamide N-methyltransferase; structural genom | 98.51 | |
| 3pfg_A | 263 | N-methyltransferase; N,N-dimethyltransferase, SAM | 98.5 | |
| 2xvm_A | 199 | Tellurite resistance protein TEHB; antibiotic resi | 98.5 | |
| 3i53_A | 332 | O-methyltransferase; CO-complex, rossmann-like fol | 98.5 | |
| 3p9c_A | 364 | Caffeic acid O-methyltransferase; S-adenosylmethio | 98.49 | |
| 2qe6_A | 274 | Uncharacterized protein TFU_2867; putative methylt | 98.49 | |
| 3i9f_A | 170 | Putative type 11 methyltransferase; structural gen | 98.48 | |
| 4fsd_A | 383 | Arsenic methyltransferase; rossmann fold; 1.75A {C | 98.47 | |
| 1y8c_A | 246 | S-adenosylmethionine-dependent methyltransferase; | 98.47 | |
| 2ip2_A | 334 | Probable phenazine-specific methyltransferase; pyo | 98.46 | |
| 2kw5_A | 202 | SLR1183 protein; structural genomics, northeast st | 98.43 | |
| 3ofk_A | 216 | Nodulation protein S; NODS, N-methyltransferase, S | 98.42 | |
| 2ld4_A | 176 | Anamorsin; methyltransferase-like fold, alpha/beta | 98.41 | |
| 3ggd_A | 245 | SAM-dependent methyltransferase; YP_325210.1, stru | 98.4 | |
| 3jwg_A | 219 | HEN1, methyltransferase type 12; 1.90A {Clostridiu | 98.38 | |
| 3giw_A | 277 | Protein of unknown function DUF574; rossmann-fold | 98.37 | |
| 3cgg_A | 195 | SAM-dependent methyltransferase; NP_600671.1, meth | 98.36 | |
| 1qzz_A | 374 | RDMB, aclacinomycin-10-hydroxylase; anthracycline, | 98.36 | |
| 3dp7_A | 363 | SAM-dependent methyltransferase; structural genomi | 98.34 | |
| 1ve3_A | 227 | Hypothetical protein PH0226; dimer, riken structur | 98.33 | |
| 1fp1_D | 372 | Isoliquiritigenin 2'-O-methyltransferase; protein- | 98.32 | |
| 3thr_A | 293 | Glycine N-methyltransferase; GNMT, folate, methylt | 98.32 | |
| 3jwh_A | 217 | HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena | 98.31 | |
| 3m70_A | 286 | Tellurite resistance protein TEHB homolog; structu | 98.3 | |
| 3g07_A | 292 | 7SK snRNA methylphosphate capping enzyme; structur | 98.3 | |
| 2gs9_A | 211 | Hypothetical protein TT1324; methyl transferase, s | 98.29 | |
| 2zfu_A | 215 | Nucleomethylin, cerebral protein 1; nucleolar prot | 98.27 | |
| 1x19_A | 359 | CRTF-related protein; methyltransferase, bacterioc | 98.27 | |
| 1tw3_A | 360 | COMT, carminomycin 4-O-methyltransferase; anthracy | 98.25 | |
| 2p8j_A | 209 | S-adenosylmethionine-dependent methyltransferase; | 98.23 | |
| 3d2l_A | 243 | SAM-dependent methyltransferase; ZP_00538691.1, st | 98.2 | |
| 3q87_B | 170 | N6 adenine specific DNA methylase; SAM-methyltrans | 98.19 | |
| 2avn_A | 260 | Ubiquinone/menaquinone biosynthesis methyltransfe | 98.19 | |
| 1zg3_A | 358 | Isoflavanone 4'-O-methyltransferase; rossman fold, | 98.18 | |
| 1yzh_A | 214 | TRNA (guanine-N(7)-)-methyltransferase; alpha-beta | 98.16 | |
| 3opn_A | 232 | Putative hemolysin; structural genomics, PSI-2, pr | 98.08 | |
| 1fp2_A | 352 | Isoflavone O-methyltransferase; protein-product co | 98.06 | |
| 3mq2_A | 218 | 16S rRNA methyltransferase; methyltranferase, ribo | 98.05 | |
| 3hp7_A | 291 | Hemolysin, putative; structural genomics, APC64019 | 98.04 | |
| 4df3_A | 233 | Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; | 97.99 | |
| 1wzn_A | 252 | SAM-dependent methyltransferase; structural genomi | 97.93 | |
| 2pxx_A | 215 | Uncharacterized protein MGC2408; structural genomi | 97.93 | |
| 2plw_A | 201 | Ribosomal RNA methyltransferase, putative; malaria | 97.92 | |
| 3hm2_A | 178 | Precorrin-6Y C5,15-methyltransferase; alpha-beta-s | 97.91 | |
| 2fca_A | 213 | TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bac | 97.9 | |
| 3bxo_A | 239 | N,N-dimethyltransferase; desosamine, sugar, carboh | 97.89 | |
| 3grz_A | 205 | L11 mtase, ribosomal protein L11 methyltransferase | 97.88 | |
| 3lbf_A | 210 | Protein-L-isoaspartate O-methyltransferase; modifi | 97.88 | |
| 1ej0_A | 180 | FTSJ; methyltransferase, adoMet, adenosyl methioni | 97.87 | |
| 1dus_A | 194 | MJ0882; hypothetical protein, methanococcus jannas | 97.87 | |
| 3mti_A | 185 | RRNA methylase; SAM-dependent, PSI, MCSG, structur | 97.86 | |
| 3dmg_A | 381 | Probable ribosomal RNA small subunit methyltransf; | 97.85 | |
| 3dxy_A | 218 | TRNA (guanine-N(7)-)-methyltransferase; rossmann f | 97.85 | |
| 3iv6_A | 261 | Putative Zn-dependent alcohol dehydrogenase; alpha | 97.85 | |
| 3q7e_A | 349 | Protein arginine N-methyltransferase 1; HET: SAH; | 97.81 | |
| 3p9n_A | 189 | Possible methyltransferase (methylase); RV2966C, a | 97.8 | |
| 3r0q_C | 376 | Probable protein arginine N-methyltransferase 4.2; | 97.78 | |
| 3id6_C | 232 | Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; | 97.75 | |
| 2fyt_A | 340 | Protein arginine N-methyltransferase 3; structural | 97.73 | |
| 1zx0_A | 236 | Guanidinoacetate N-methyltransferase; structural g | 97.72 | |
| 1p91_A | 269 | Ribosomal RNA large subunit methyltransferase A; R | 97.7 | |
| 3evz_A | 230 | Methyltransferase; NYSGXRC, NEW YORK SGX research | 97.68 | |
| 1g6q_1 | 328 | HnRNP arginine N-methyltransferase; SAM-binding do | 97.6 | |
| 3eey_A | 197 | Putative rRNA methylase; rRNA methylation, S-adeno | 97.57 | |
| 3p2e_A | 225 | 16S rRNA methylase; methyltransferase, transferase | 97.57 | |
| 2nyu_A | 196 | Putative ribosomal RNA methyltransferase 2; SAM, s | 97.55 | |
| 3uwp_A | 438 | Histone-lysine N-methyltransferase, H3 lysine-79; | 97.55 | |
| 3sso_A | 419 | Methyltransferase; macrolide, natural product, ros | 97.54 | |
| 4dcm_A | 375 | Ribosomal RNA large subunit methyltransferase G; 2 | 97.54 | |
| 1xdz_A | 240 | Methyltransferase GIDB; MCSG, protein structure in | 97.52 | |
| 4hc4_A | 376 | Protein arginine N-methyltransferase 6; HRMT1L6, S | 97.47 | |
| 3m33_A | 226 | Uncharacterized protein; structural genomics, PSI- | 97.45 | |
| 3ckk_A | 235 | TRNA (guanine-N(7)-)-methyltransferase; mettl1, S- | 97.45 | |
| 2pjd_A | 343 | Ribosomal RNA small subunit methyltransferase C; g | 97.44 | |
| 1nt2_A | 210 | Fibrillarin-like PRE-rRNA processing protein; adeM | 97.43 | |
| 3e05_A | 204 | Precorrin-6Y C5,15-methyltransferase (decarboxyla; | 97.42 | |
| 1af7_A | 274 | Chemotaxis receptor methyltransferase CHER; chemot | 97.42 | |
| 2nxc_A | 254 | L11 mtase, ribosomal protein L11 methyltransferase | 97.42 | |
| 1vbf_A | 231 | 231AA long hypothetical protein-L-isoaspartate O- | 97.41 | |
| 2yxe_A | 215 | Protein-L-isoaspartate O-methyltransferase; rossma | 97.4 | |
| 1l3i_A | 192 | Precorrin-6Y methyltransferase/putative decarboxyl | 97.37 | |
| 3lpm_A | 259 | Putative methyltransferase; structural genomics, p | 97.35 | |
| 1jg1_A | 235 | PIMT;, protein-L-isoaspartate O-methyltransferase; | 97.35 | |
| 2ozv_A | 260 | Hypothetical protein ATU0636; structural genomics, | 97.34 | |
| 1o9g_A | 250 | RRNA methyltransferase; antibiotic resistance, Se- | 97.34 | |
| 3orh_A | 236 | Guanidinoacetate N-methyltransferase; structura ge | 97.33 | |
| 3fzg_A | 200 | 16S rRNA methylase; methyltransferase, plasmid, tr | 97.33 | |
| 2ift_A | 201 | Putative methylase HI0767; NESG, Y767_haein, struc | 97.31 | |
| 4dzr_A | 215 | Protein-(glutamine-N5) methyltransferase, release | 97.31 | |
| 3gjy_A | 317 | Spermidine synthase; APC62791, structural genomics | 97.29 | |
| 3adn_A | 294 | Spermidine synthase; aminopropyltransferase, polya | 97.28 | |
| 3bwc_A | 304 | Spermidine synthase; SAM, SGPP, structura genomics | 97.26 | |
| 2b3t_A | 276 | Protein methyltransferase HEMK; translation termin | 97.22 | |
| 2fpo_A | 202 | Methylase YHHF; structural genomics, putative meth | 97.2 | |
| 3gdh_A | 241 | Trimethylguanosine synthase homolog; M7G, CAP, dim | 97.18 | |
| 2frn_A | 278 | Hypothetical protein PH0793; structural genomics, | 97.15 | |
| 1jsx_A | 207 | Glucose-inhibited division protein B; methyltransf | 97.14 | |
| 2ipx_A | 233 | RRNA 2'-O-methyltransferase fibrillarin; FBL, stru | 97.14 | |
| 1dl5_A | 317 | Protein-L-isoaspartate O-methyltransferase; isoasp | 97.12 | |
| 1uir_A | 314 | Polyamine aminopropyltransferase; spermidien synth | 97.07 | |
| 2y1w_A | 348 | Histone-arginine methyltransferase CARM1; histone | 97.07 | |
| 1fbn_A | 230 | MJ fibrillarin homologue; MJ proteins, ribosomal R | 97.06 | |
| 1u2z_A | 433 | Histone-lysine N-methyltransferase, H3 lysine-79 s | 97.03 | |
| 2b25_A | 336 | Hypothetical protein; structural genomics, methyl | 97.01 | |
| 1g8a_A | 227 | Fibrillarin-like PRE-rRNA processing protein; rRNA | 97.01 | |
| 3bzb_A | 281 | Uncharacterized protein; RED ALGA, protein structu | 97.01 | |
| 2xyq_A | 290 | Putative 2'-O-methyl transferase; transferase-vira | 96.99 | |
| 2yxd_A | 183 | Probable cobalt-precorrin-6Y C(15)-methyltransfer | 96.97 | |
| 2esr_A | 177 | Methyltransferase; structural genomics, hypothetic | 96.97 | |
| 2vdv_E | 246 | TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl | 96.93 | |
| 2fhp_A | 187 | Methylase, putative; alpha-beta-alpha sandwich, st | 96.93 | |
| 2h00_A | 254 | Methyltransferase 10 domain containing protein; st | 96.91 | |
| 3mb5_A | 255 | SAM-dependent methyltransferase; RNA methyltransfe | 96.89 | |
| 3fpf_A | 298 | Mtnas, putative uncharacterized protein; thermonic | 96.87 | |
| 3u81_A | 221 | Catechol O-methyltransferase; neurotransmitter deg | 96.83 | |
| 1r18_A | 227 | Protein-L-isoaspartate(D-aspartate)-O-methyltrans; | 96.82 | |
| 2pbf_A | 227 | Protein-L-isoaspartate O-methyltransferase beta-A | 96.81 | |
| 3njr_A | 204 | Precorrin-6Y methylase; methyltransferase, decarbo | 96.81 | |
| 3dou_A | 191 | Ribosomal RNA large subunit methyltransferase J; c | 96.8 | |
| 1i9g_A | 280 | Hypothetical protein RV2118C; mtase, adoMet, cryst | 96.79 | |
| 3htx_A | 950 | HEN1; HEN1, small RNA methyltransferase, protein-R | 96.79 | |
| 2gpy_A | 233 | O-methyltransferase; structural genomics, PSI, pro | 96.76 | |
| 3g89_A | 249 | Ribosomal RNA small subunit methyltransferase G; 1 | 96.76 | |
| 1i1n_A | 226 | Protein-L-isoaspartate O-methyltransferase; S-aden | 96.75 | |
| 2p41_A | 305 | Type II methyltransferase; vizier, viral enzymes i | 96.73 | |
| 1ws6_A | 171 | Methyltransferase; structural genomics, riken stru | 96.72 | |
| 1yb2_A | 275 | Hypothetical protein TA0852; structural genomics, | 96.72 | |
| 2hnk_A | 239 | SAM-dependent O-methyltransferase; modified rossma | 96.69 | |
| 3ntv_A | 232 | MW1564 protein; rossmann fold, putative methyltran | 96.66 | |
| 2i7c_A | 283 | Spermidine synthase; transferase, structural genom | 96.65 | |
| 2wa2_A | 276 | Non-structural protein 5; transferase, S-adenosyl- | 96.64 | |
| 2oxt_A | 265 | Nucleoside-2'-O-methyltransferase; flavivirus, vir | 96.63 | |
| 2pwy_A | 258 | TRNA (adenine-N(1)-)-methyltransferase; mtase, ado | 96.63 | |
| 1inl_A | 296 | Spermidine synthase; beta-barrel, rossman fold, st | 96.62 | |
| 1ixk_A | 315 | Methyltransferase; open beta sheet; 1.90A {Pyrococ | 96.62 | |
| 3tfw_A | 248 | Putative O-methyltransferase; PSI-biology, nysgrc, | 96.6 | |
| 1xj5_A | 334 | Spermidine synthase 1; structural genomics, protei | 96.59 | |
| 2bm8_A | 236 | Cephalosporin hydroxylase CMCI; cephamycin biosynt | 96.59 | |
| 1mjf_A | 281 | Spermidine synthase; spermidine synthetase, struct | 96.55 | |
| 2ih2_A | 421 | Modification methylase TAQI; DNA, DNA methyltransf | 96.54 | |
| 1o54_A | 277 | SAM-dependent O-methyltransferase; TM0748, structu | 96.54 | |
| 1iy9_A | 275 | Spermidine synthase; rossmann fold, structural gen | 96.54 | |
| 2b2c_A | 314 | Spermidine synthase; beta-alpha, transferase; 2.50 | 96.51 | |
| 3dr5_A | 221 | Putative O-methyltransferase; Q8NRD3, CGL1119, PF0 | 96.43 | |
| 2pt6_A | 321 | Spermidine synthase; transferase, structural genom | 96.42 | |
| 3lcv_B | 281 | Sisomicin-gentamicin resistance methylase SGM; ant | 96.4 | |
| 2o07_A | 304 | Spermidine synthase; structural genomics, structur | 96.39 | |
| 3tma_A | 354 | Methyltransferase; thump domain; 2.05A {Thermus th | 96.32 | |
| 2yxl_A | 450 | PH0851 protein, 450AA long hypothetical FMU protei | 96.26 | |
| 3ajd_A | 274 | Putative methyltransferase MJ0026; tRNA, M5C, ross | 96.24 | |
| 3frh_A | 253 | 16S rRNA methylase; methyltransferase domain, heli | 96.23 | |
| 2frx_A | 479 | Hypothetical protein YEBU; rossmann-type S-adenosy | 96.16 | |
| 3b3j_A | 480 | Histone-arginine methyltransferase CARM1; protein | 96.16 | |
| 2yvl_A | 248 | TRMI protein, hypothetical protein; tRNA, methyltr | 96.14 | |
| 3duw_A | 223 | OMT, O-methyltransferase, putative; alternating of | 96.13 | |
| 3tr6_A | 225 | O-methyltransferase; cellular processes; HET: SAH; | 96.13 | |
| 1sqg_A | 429 | SUN protein, FMU protein; rossmann-fold, mixed bet | 96.06 | |
| 3r3h_A | 242 | O-methyltransferase, SAM-dependent; structural gen | 96.0 | |
| 1nv8_A | 284 | HEMK protein; class I adoMet-dependent methyltrans | 95.92 | |
| 3lec_A | 230 | NADB-rossmann superfamily protein; PSI, MCSG, stru | 95.89 | |
| 2igt_A | 332 | SAM dependent methyltransferase; alpha-beta sandwi | 95.87 | |
| 3a27_A | 272 | TYW2, uncharacterized protein MJ1557; wybutosine m | 95.81 | |
| 1wxx_A | 382 | TT1595, hypothetical protein TTHA1280; thermus the | 95.78 | |
| 3m6w_A | 464 | RRNA methylase; rRNA methyltransferase, 5-methylcy | 95.65 | |
| 2f8l_A | 344 | Hypothetical protein LMO1582; structural genomics, | 95.41 | |
| 1sui_A | 247 | Caffeoyl-COA O-methyltransferase; rossmann fold, p | 95.35 | |
| 2avd_A | 229 | Catechol-O-methyltransferase; structural genomics, | 95.33 | |
| 3m4x_A | 456 | NOL1/NOP2/SUN family protein; mtase domain, PUA do | 95.13 | |
| 3c3y_A | 237 | Pfomt, O-methyltransferase; plant secondary metabo | 95.13 | |
| 3cbg_A | 232 | O-methyltransferase; cyanobacterium; HET: SAH FER | 95.1 | |
| 1ne2_A | 200 | Hypothetical protein TA1320; structural genomics, | 94.69 | |
| 3c3p_A | 210 | Methyltransferase; NP_951602.1, structural genomic | 94.68 | |
| 3gnl_A | 244 | Uncharacterized protein, DUF633, LMOF2365_1472; st | 94.62 | |
| 4dmg_A | 393 | Putative uncharacterized protein TTHA1493; rRNA, m | 94.51 | |
| 2cmg_A | 262 | Spermidine synthase; transferase, putrescine amino | 94.3 | |
| 3gru_A | 295 | Dimethyladenosine transferase; rossman fold, ribos | 94.27 | |
| 1zq9_A | 285 | Probable dimethyladenosine transferase; SGC, struc | 94.2 | |
| 2as0_A | 396 | Hypothetical protein PH1915; RNA methyltransferase | 93.83 | |
| 2b78_A | 385 | Hypothetical protein SMU.776; structure genomics, | 93.61 | |
| 3k6r_A | 278 | Putative transferase PH0793; structural genomics, | 93.35 | |
| 3tqs_A | 255 | Ribosomal RNA small subunit methyltransferase A; p | 93.25 | |
| 4gqb_A | 637 | Protein arginine N-methyltransferase 5; TIM barrel | 93.2 | |
| 3v97_A | 703 | Ribosomal RNA large subunit methyltransferase L; Y | 93.02 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 92.94 | |
| 3evf_A | 277 | RNA-directed RNA polymerase NS5; NS5 methyltransfe | 92.66 | |
| 2h1r_A | 299 | Dimethyladenosine transferase, putative; SGC toron | 92.44 | |
| 2qm3_A | 373 | Predicted methyltransferase; putative methyltransf | 91.96 | |
| 3kr9_A | 225 | SAM-dependent methyltransferase; class I rossmann- | 91.86 | |
| 1wy7_A | 207 | Hypothetical protein PH1948; seven-stranded beta s | 91.73 | |
| 3khk_A | 544 | Type I restriction-modification system methylation | 91.59 | |
| 3c0k_A | 396 | UPF0064 protein YCCW; PUA domain, adoMet dependent | 91.56 | |
| 2okc_A | 445 | Type I restriction enzyme stysji M protein; NP_813 | 91.12 | |
| 1qam_A | 244 | ERMC' methyltransferase; rRNA methyltransferase ER | 90.83 | |
| 2yx1_A | 336 | Hypothetical protein MJ0883; methyl transferase, t | 90.73 | |
| 3gcz_A | 282 | Polyprotein; flavivirus, RNA capping, methyltransf | 90.47 | |
| 3tm4_A | 373 | TRNA (guanine N2-)-methyltransferase TRM14; rossma | 90.4 | |
| 3s1s_A | 878 | Restriction endonuclease bpusi; PD--(D/E)XK cataly | 90.07 | |
| 3fut_A | 271 | Dimethyladenosine transferase; methyltransferase, | 89.5 | |
| 2qfm_A | 364 | Spermine synthase; spermidine aminopropyltransfera | 89.46 | |
| 1uwv_A | 433 | 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA m | 89.43 | |
| 3lkd_A | 542 | Type I restriction-modification system methyltrans | 89.3 | |
| 3eld_A | 300 | Methyltransferase; flavivirus, RNA capping, guanyl | 87.89 | |
| 1qyr_A | 252 | KSGA, high level kasugamycin resistance protein, S | 87.16 | |
| 2dul_A | 378 | N(2),N(2)-dimethylguanosine tRNA methyltransferas; | 84.58 | |
| 3axs_A | 392 | Probable N(2),N(2)-dimethylguanosine tRNA methylt | 83.66 | |
| 3ftd_A | 249 | Dimethyladenosine transferase; KSGA, rossmann-like | 83.59 | |
| 2b9e_A | 309 | NOL1/NOP2/SUN domain family, member 5 isoform 2; m | 83.35 | |
| 2ar0_A | 541 | M.ecoki, type I restriction enzyme ecoki M protein | 83.08 | |
| 3uzu_A | 279 | Ribosomal RNA small subunit methyltransferase A; s | 82.87 | |
| 1yub_A | 245 | Ermam, rRNA methyltransferase; MLS antibiotics; NM | 81.91 |
| >1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-96 Score=728.56 Aligned_cols=340 Identities=34% Similarity=0.543 Sum_probs=310.7
Q ss_pred ccceecccCCCCCCchHHhhHHHHHHHHHHHHHHHHHHHhhcccccccCCCCCceEEeeecCCCCcccHHHHHHHHHHHH
Q 017439 11 SPEAYPMVGGDGPHSYAKNSIYQEAIVNGSKGMIAAGIRKTLDLKSLRLDTSSTFKIADLGCSTGPNTFIAMQNIIEAIE 90 (371)
Q Consensus 11 ~~~~~~M~gG~g~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~ 90 (371)
+++++||+||+|++||++||.+|++++..++|++++||++++. ... .+++++|||||||+|+||+.+++.||++|+
T Consensus 3 ~~~~~~m~gg~G~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~-~~~---~~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~ 78 (359)
T 1m6e_X 3 VRQVLHMKGGAGENSYAMNSFIQRQVISITKPITEAAITALYS-GDT---VTTRLAIADLGCSSGPNALFAVTELIKTVE 78 (359)
T ss_dssp CHHHHCCCCCTTSTTTTSSCHHHHHHHHHTHHHHHHHHHHHHS-SSS---SSSEECCEEESCCSSTTTTTGGGTTHHHHH
T ss_pred cccccccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccC---CCCceEEEecCCCCCcchHHHHHHHHHHHH
Confidence 7899999999999999999999999999999999999999654 211 357899999999999999999999999999
Q ss_pred hhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCC----cceeeeccCCCcccccCCCCceeEEEecCCcccc
Q 017439 91 LIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLS----KKYFATGVPGSFHGRLFPESSLHVAHTSNALPWL 166 (371)
Q Consensus 91 ~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~----~~~f~~gvpgSFy~rLfP~~Svd~~~Ss~alHWL 166 (371)
+ +|++.+..+ .| +|||||||||+||||+||++||.. ++||++|||||||+||||++|+|++||++|||||
T Consensus 79 ~-~~~~~~~~~--~p---e~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWl 152 (359)
T 1m6e_X 79 E-LRKKMGREN--SP---EYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFYGRLFPRNTLHFIHSSYSLMWL 152 (359)
T ss_dssp H-HHHSSSCSS--CC---EEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSSSCCSCTTCBSCEEEESCTTBC
T ss_pred H-HHHhcCCCC--CC---ceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhhhccCCCCceEEEEehhhhhhc
Confidence 9 987644114 77 999999999999999999999862 5799999999999999999999999999999999
Q ss_pred CCCCccccCCCCCCcCCCceeecCC-CHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEecCcCCCCCCCCCCCcch
Q 017439 167 SKIPKEITNSNSPAWNRGHILCSGF-EKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTPTIRDGIPMFSTPEGTN 245 (371)
Q Consensus 167 S~vP~~l~d~~~~~~nkg~i~~~~~-~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~gr~~~~~~~~~~~~~~ 245 (371)
|++|+.+.+ |||+|||+++ +++|.+||++||++||+.||++|++||||||+||++++|+++.++.++ +.+.+
T Consensus 153 s~~p~~l~~------nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~gr~~~~~~~~-~~~~~ 225 (359)
T 1m6e_X 153 SQVPIGIES------NKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILGRRSEDRAST-ECCLI 225 (359)
T ss_dssp SSCCSCCCC------CTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEEECSSSSSSST-TTSTT
T ss_pred ccCchhhhc------cCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEecCCCCCcccc-chHHH
Confidence 999999887 9999999875 677889999999999999999999999999999999999999877654 45678
Q ss_pred HHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEeecCcccc----------cccHHHHH
Q 017439 246 FDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFTHPLVHM----------VYSAEFWA 315 (371)
Q Consensus 246 ~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~~~p~~~~----------~~~~~~~a 315 (371)
|+.|.++|++||.+|+|++|++|+||+|+|+||++|++++|+++|+|+|+++|.+..+|... ...++.++
T Consensus 226 ~~~l~~al~~mv~eGli~~ek~d~f~~P~y~ps~~E~~~~ie~~G~F~i~~~e~~~~~~~~~~~~~d~~~~~~~~g~~~a 305 (359)
T 1m6e_X 226 WQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIEASEIYWSSCTKDGDGGGSVEEEGYNVA 305 (359)
T ss_dssp THHHHHHHHHHHHTTCSCCSTTGGGCCCCBCCCSHHHHHHHHHTTTBCCEEEEEEEEETTCCSSCTTCCSSTTTTTTHHH
T ss_pred HHHHHHHHHHHHHccccchhhhhccCCCccCCCHHHHHHHHHHcCCceEEEEEEEeeccCcccchhhhhhhhhHhHhHhh
Confidence 99999999999999999999999999999999999999999999999999999997777542 13467999
Q ss_pred HhHHHhhhhhhhhhhcHHHHHHHHHHHHHHHHHhhhhhccCCCCCeEEEEEEEEeC
Q 017439 316 SLSRAAFGGLVGQHFGYQFVDRIFNYYSTKLAENMSSICDGKTQDKIELFVLLRRN 371 (371)
Q Consensus 316 ~~iRa~~~~~l~~h~ge~i~delf~r~~~~~~~~~~~~~~~~~~~~~~~~~~L~r~ 371 (371)
+++||+++|++.+|||++++|+||+||++++++++++ ...++++++++|+||
T Consensus 306 ~~~Ra~~e~ll~~hfG~~i~d~lf~ry~~~~~~~~~~----~~~~~~~~~~~L~k~ 357 (359)
T 1m6e_X 306 RCMRAVAEPLLLDHFGEAIIEDVFHRYKLLIIERMSK----EKTKFINVIVSLIRK 357 (359)
T ss_dssp HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHS----SCCEEEEEEEEEEBC
T ss_pred hhhhhhcchhhHHhccHHHHHHHHHHHHHHHHHHHhh----CCCceEEEEEEEEeC
Confidence 9999999999999999999999999999999999884 456789999999997
|
| >2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-95 Score=728.18 Aligned_cols=340 Identities=32% Similarity=0.516 Sum_probs=294.1
Q ss_pred ccceecccCCCCCCchHHhhHHHHHHHHHHHHHHHHHHHhhcccccccCCCCCceEEeeecCCCCcccHHHHHHHHHHHH
Q 017439 11 SPEAYPMVGGDGPHSYAKNSIYQEAIVNGSKGMIAAGIRKTLDLKSLRLDTSSTFKIADLGCSTGPNTFIAMQNIIEAIE 90 (371)
Q Consensus 11 ~~~~~~M~gG~g~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~ 90 (371)
++++|||+||+|++||++||. |++++..++|++++||++++. ...| ...++++|||||||+|+||+.+++.||++|+
T Consensus 3 ~~~~~~M~gg~G~~sY~~nS~-Q~~~~~~~~~~~~~ai~~l~~-~~~~-~~~~~~~IaDlGCssG~NT~~~v~~ii~~i~ 79 (384)
T 2efj_A 3 LQEVLHMNGGEGDTSYAKNSS-YNLFLIRVKPVLEQCIQELLR-ANLP-NINKCFKVGDLGCASGPNTFSTVRDIVQSID 79 (384)
T ss_dssp CTTTCCCCC----CCHHHHCC-TTTTHHHHHHHHHHHHHHHHH-TTCT-TTTTEEEEEEETCCSSHHHHHHHHHHHHHHT
T ss_pred cccccccCCCCChhhHHHhHH-HHHHHHHHHHHHHHHHHHhhh-cccC-CcCCceEEEecCCCCCchHHHHHHHHHHHHH
Confidence 889999999999999999999 999999999999999998553 2211 0123899999999999999999999999999
Q ss_pred hhhhcc--cCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC------------CcceeeeccCCCcccccCCCCceeE
Q 017439 91 LIKYQD--DCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL------------SKKYFATGVPGSFHGRLFPESSLHV 156 (371)
Q Consensus 91 ~~~~~~--~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~------------~~~~f~~gvpgSFy~rLfP~~Svd~ 156 (371)
+ +|++ .+ .+ .| +|||||||||+||||+||++||. .++||++|||||||+||||++|+|+
T Consensus 80 ~-~~~~~~~~-~~--~p---e~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f~~gvpgSFy~rlfp~~S~d~ 152 (384)
T 2efj_A 80 K-VGQEKKNE-LE--RP---TIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCLIGAMPGSFYSRLFPEESMHF 152 (384)
T ss_dssp C-C-------------C---EEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEEEEECCSCTTSCCSCTTCEEE
T ss_pred H-HhhhcccC-CC--CC---ceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceEEEecchhhhhccCCCCceEE
Confidence 9 8865 22 23 67 99999999999999999999984 2479999999999999999999999
Q ss_pred EEecCCccccCCCCccccCCCCCCcCCCceeecCC-CHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEecCcCCC-
Q 017439 157 AHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGF-EKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTPTIRDG- 234 (371)
Q Consensus 157 ~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~-~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~gr~~~- 234 (371)
+||++||||||++|+.+.++.+++||||+|||+++ +|+|.+||++||++||+.||++|++||||||+||++++|+++.
T Consensus 153 v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra~eL~pGG~mvl~~~gr~~~~ 232 (384)
T 2efj_A 153 LHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHSEELISRGRMLLTFICKEDEF 232 (384)
T ss_dssp EEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECCCTTT
T ss_pred EEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCCcc
Confidence 99999999999999999999999999999999865 6778999999999999999999999999999999999999987
Q ss_pred -CCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEeecCcccc------
Q 017439 235 -IPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFTHPLVHM------ 307 (371)
Q Consensus 235 -~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~~~p~~~~------ 307 (371)
++.+ .+++.++|++|+.+|+|+++++|+||+|+|+||++|++++|+++|+|+|+++|.++.+|...
T Consensus 233 ~~~~~-------~~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps~~E~~~~le~~g~F~i~~le~~~~~~~~~~~~~~~ 305 (384)
T 2efj_A 233 DHPNS-------MDLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEILYLETFNAPYDAGFSIDDD 305 (384)
T ss_dssp CCCCH-------HHHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCCHHHHHHHHHHHCSEEEEEEEEEEEETTTTCCC---
T ss_pred cCccc-------HHHHHHHHHHHHHhCCcchhhhcccCCcccCCCHHHHHHHHHHcCCceEEEEEEEeeccccccccccc
Confidence 5432 24999999999999999999999999999999999999999999999999999997777532
Q ss_pred -------------cccHHHHHHhHHHhhhhhhhhhhcHHHHHHHHHHHHHHHHHhhhhhccCCCCCeEEEEEEEEeC
Q 017439 308 -------------VYSAEFWASLSRAAFGGLVGQHFGYQFVDRIFNYYSTKLAENMSSICDGKTQDKIELFVLLRRN 371 (371)
Q Consensus 308 -------------~~~~~~~a~~iRa~~~~~l~~h~ge~i~delf~r~~~~~~~~~~~~~~~~~~~~~~~~~~L~r~ 371 (371)
...++.+++++||+++|+|.+|||++|+|+||+||++++++++++ ...++++++++|+||
T Consensus 306 ~~~~~~~~~~~d~~~~g~~~a~~iRa~~epll~~hfG~~i~d~lF~ry~~~~~~~~~~----~~~~~~~~~~~L~k~ 378 (384)
T 2efj_A 306 YQGRSHSPVSCDEHARAAHVASVVRSIYEPILASHFGEAILPDLSHRIAKNAAKVLRS----GKGFYDSVIISLAKK 378 (384)
T ss_dssp ------CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTHHHHHHHHHHHHHHHHHH----TCCEEEEEEEEEEEC
T ss_pred ccccccccccchHhHhHHHhhhhhHHhhhhhhHHhccHHHHHHHHHHHHHHHHHHHhh----CCCceEEEEEEEEEc
Confidence 123578999999999999999999999999999999999999885 356789999999997
|
| >3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-95 Score=720.47 Aligned_cols=347 Identities=31% Similarity=0.528 Sum_probs=292.7
Q ss_pred ccceecccCCCCCCchHHhhHHHHHHHHHHHHHHHHHHHhhcccccccCCCCCceEEeeecCCCCcccHHHHHHHHHHHH
Q 017439 11 SPEAYPMVGGDGPHSYAKNSIYQEAIVNGSKGMIAAGIRKTLDLKSLRLDTSSTFKIADLGCSTGPNTFIAMQNIIEAIE 90 (371)
Q Consensus 11 ~~~~~~M~gG~g~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~ 90 (371)
++++|||+||+|++||++||.+|++++..++|++++||++ +.+... ..+++++|||||||+|+||+.+++.||++|+
T Consensus 3 ~~~~~~m~gg~g~~sY~~nS~~Q~~~~~~~~~~~~~ai~~-l~~~~~--~~~~~~~IaDlGCssG~Nt~~~v~~ii~~i~ 79 (374)
T 3b5i_A 3 LERLLSMKGGKGQDSYANNSLAQAMHARSMLHLLEETLEN-VHLNSS--ASPPPFTAVDLGCSSGANTVHIIDFIVKHIS 79 (374)
T ss_dssp -----------------------CTTHHHHHHHHHHHHHT-SCCCCS--SSCCCEEEEEETCCSSHHHHHHHHHHHHHHH
T ss_pred cccccCCCCCCCcchHHHhhHHHHHHHHHHHHHHHHHHHH-hhcccc--CCCCceEEEecCCCCChhHHHHHHHHHHHHH
Confidence 7899999999999999999999999999999999999987 433321 0356899999999999999999999999999
Q ss_pred hhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCC---------------cceeeeccCCCcccccCCCCcee
Q 017439 91 LIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLS---------------KKYFATGVPGSFHGRLFPESSLH 155 (371)
Q Consensus 91 ~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~---------------~~~f~~gvpgSFy~rLfP~~Svd 155 (371)
+ +|+..+ .+ .| +|||+|||||+||||+||++|++. ++||++|||||||+||||++|+|
T Consensus 80 ~-~~~~~~-~~--~p---e~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~f~~gvpgSFy~rlfP~~S~d 152 (374)
T 3b5i_A 80 K-RFDAAG-ID--PP---EFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSYFVAGVPGSFYRRLFPARTID 152 (374)
T ss_dssp H-HHHHTT-CC--CC---CEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCSEEEEEESCTTSCCSCTTCEE
T ss_pred H-HHhhcC-CC--CC---ceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCceEEEecChhhhcccCCCcceE
Confidence 9 887644 23 67 999999999999999999999863 45999999999999999999999
Q ss_pred EEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEecCcCCCC
Q 017439 156 VAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTPTIRDGI 235 (371)
Q Consensus 156 ~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~gr~~~~ 235 (371)
++||++||||||++|+.+.++.+++||||+|||++++|+|.+||++||++||..||++|++||||||+||++++|+++..
T Consensus 153 ~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra~eL~pGG~mvl~~~gr~~~~ 232 (374)
T 3b5i_A 153 FFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARAAEVKRGGAMFLVCLGRTSVD 232 (374)
T ss_dssp EEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCSS
T ss_pred EEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEEecCCCCc
Confidence 99999999999999999999999999999999999988899999999999999999999999999999999999999887
Q ss_pred CCCCCCCcchH-HHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEeecCcccc-------
Q 017439 236 PMFSTPEGTNF-DYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFTHPLVHM------- 307 (371)
Q Consensus 236 ~~~~~~~~~~~-~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~~~p~~~~------- 307 (371)
+.++.+.+.+| ++|.++|++|+.||+++++++|+|++|+|+||++|++++|+++|+|+|+++|.+..+|+..
T Consensus 233 ~~~~~~~~~~~~~~l~~al~~l~~eG~i~~e~~d~f~~P~y~ps~~E~~~~l~~~~~F~I~~le~~~~~~~~~~~~~~~~ 312 (374)
T 3b5i_A 233 PTDQGGAGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIPVYAPSLQDFKEVVDANGSFAIDKLVVYKGGSPLVVNEPDDA 312 (374)
T ss_dssp TTCCHHHHHHHSSHHHHHHHHTTSSSSSCHHHHSSCCCCBCCCCHHHHHHHHHHHCSEEEEEEEEEECCCCCCCSSTTCH
T ss_pred cccccchhhHHHHHHHHHHHHHHHhCCcchhhcccCCccccCCCHHHHHHHHHhcCCcEEEEEEEEeecCCccccccchh
Confidence 76555556678 8999999999999999999999999999999999999999988899999999998777432
Q ss_pred cccHHHHHHhHHHhhhhhhhhhhcHHHHHHHHHHHHHHHHHhhhhhccCCCCC--eEEEEEEEE
Q 017439 308 VYSAEFWASLSRAAFGGLVGQHFGYQFVDRIFNYYSTKLAENMSSICDGKTQD--KIELFVLLR 369 (371)
Q Consensus 308 ~~~~~~~a~~iRa~~~~~l~~h~ge~i~delf~r~~~~~~~~~~~~~~~~~~~--~~~~~~~L~ 369 (371)
...++.+++++||+++|++.+|||++++|+||+||+++++++++++ .++.+ .++++++|+
T Consensus 313 ~~~g~~~a~~~Ra~~e~ll~~hfg~~i~d~lf~ry~~~~~~~~~~~--~~~~~~~~~~~~~~l~ 374 (374)
T 3b5i_A 313 SEVGRAFASSCRSVAGVLVEAHIGEELSNKLFSRVESRATSHAKDV--LVNLQFFHIVASLSFT 374 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTCHHH--HTTCCCEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHhccchhHhhccHHHHHHHHHHHHHHHHHhHHHh--hhccccceEEEEEEeC
Confidence 1246899999999999999999999999999999999999999965 24455 799999985
|
| >3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=99.52 E-value=1e-13 Score=130.31 Aligned_cols=202 Identities=17% Similarity=0.198 Sum_probs=132.2
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPG 142 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpg 142 (371)
...+|+|+|||+|..+..+.. . ..+|+..|+...-....=+.++ +-.|..+..
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~-------~-----------------~~~v~gvD~s~~~~~~a~~~~~--~~~~~~~d~- 109 (279)
T 3ccf_A 57 PGEFILDLGCGTGQLTEKIAQ-------S-----------------GAEVLGTDNAATMIEKARQNYP--HLHFDVADA- 109 (279)
T ss_dssp TTCEEEEETCTTSHHHHHHHH-------T-----------------TCEEEEEESCHHHHHHHHHHCT--TSCEEECCT-
T ss_pred CCCEEEEecCCCCHHHHHHHh-------C-----------------CCeEEEEECCHHHHHHHHhhCC--CCEEEECCh-
Confidence 356999999999999887762 1 1256677765433222222221 223444432
Q ss_pred CcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCc
Q 017439 143 SFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGG 222 (371)
Q Consensus 143 SFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 222 (371)
..+-+++++|+++|+.++||+... ..+|+.-++-|+|||
T Consensus 110 ---~~~~~~~~fD~v~~~~~l~~~~d~--------------------------------------~~~l~~~~~~LkpgG 148 (279)
T 3ccf_A 110 ---RNFRVDKPLDAVFSNAMLHWVKEP--------------------------------------EAAIASIHQALKSGG 148 (279)
T ss_dssp ---TTCCCSSCEEEEEEESCGGGCSCH--------------------------------------HHHHHHHHHHEEEEE
T ss_pred ---hhCCcCCCcCEEEEcchhhhCcCH--------------------------------------HHHHHHHHHhcCCCc
Confidence 224446899999999999996431 236777788999999
Q ss_pred eEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEeec
Q 017439 223 LLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFTH 302 (371)
Q Consensus 223 ~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~~~ 302 (371)
++++.+.+.++. ....+.+...+.. .|.- ......|+++++.+++++++++.| |+++.++.+..
T Consensus 149 ~l~~~~~~~~~~--------~~~~~~~~~~~~~---~~~~----~~~~~~~~~~~~~~~~~~~l~~aG-f~~~~~~~~~~ 212 (279)
T 3ccf_A 149 RFVAEFGGKGNI--------KYILEALYNALET---LGIH----NPQALNPWYFPSIGEYVNILEKQG-FDVTYAALFNR 212 (279)
T ss_dssp EEEEEEECTTTT--------HHHHHHHHHHHHH---HTCC----CGGGGCCCCCCCHHHHHHHHHHHT-EEEEEEEEEEC
T ss_pred EEEEEecCCcch--------HHHHHHHHHHHHh---cCCc----cccCcCceeCCCHHHHHHHHHHcC-CEEEEEEEecc
Confidence 999998765432 0123333333332 2321 233456788999999999999987 99999888866
Q ss_pred CcccccccHHHHHHhHHHhhhhhhhhhhcHHHHHHHHHHHHHHHHHhh
Q 017439 303 PLVHMVYSAEFWASLSRAAFGGLVGQHFGYQFVDRIFNYYSTKLAENM 350 (371)
Q Consensus 303 p~~~~~~~~~~~a~~iRa~~~~~l~~h~ge~i~delf~r~~~~~~~~~ 350 (371)
++.. +.+.+.+..|+++...+++. .+.++..+++.+++.+.+.+..
T Consensus 213 ~~~~-~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 258 (279)
T 3ccf_A 213 PTTL-AEGEFGMANWIQMFASAFLV-GLTPDQQVQLIRKVEATLQDKL 258 (279)
T ss_dssp CEEC-SSGGGHHHHHHHHHCHHHHT-TCCHHHHHHHHHHHHHHHHHHH
T ss_pred cccc-cCCHHHHHHHHHHhhHHHhc-cCCHHHHHHHHHHHHHHHHhhc
Confidence 6532 22456677888876666654 4777788888888888777654
|
| >2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.45 E-value=6.7e-13 Score=122.38 Aligned_cols=227 Identities=13% Similarity=0.196 Sum_probs=138.0
Q ss_pred CchHHhhHHHHHHHHHHHHHHHHHHHhhcccccccCCCCCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCC
Q 017439 24 HSYAKNSIYQEAIVNGSKGMIAAGIRKTLDLKSLRLDTSSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHD 103 (371)
Q Consensus 24 ~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~ 103 (371)
..|.+.+..|...... + ++. +. .....+|+|+|||+|..+..+. + ++
T Consensus 9 ~~y~~~~~~~~~~~~~---l----~~~-~~-------~~~~~~vLdiG~G~G~~~~~l~--------~-~~--------- 55 (259)
T 2p35_A 9 QQYLKFEDERTRPARD---L----LAQ-VP-------LERVLNGYDLGCGPGNSTELLT--------D-RY--------- 55 (259)
T ss_dssp GGGBCCCCGGGHHHHH---H----HTT-CC-------CSCCSSEEEETCTTTHHHHHHH--------H-HH---------
T ss_pred HHHHHHHHHHHHHHHH---H----HHh-cC-------CCCCCEEEEecCcCCHHHHHHH--------H-hC---------
Confidence 5688888777765442 2 211 21 2345689999999999988776 2 22
Q ss_pred CCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCC
Q 017439 104 NPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNR 183 (371)
Q Consensus 104 ~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nk 183 (371)
| ..+++..|+...--...-+..+ +--|..+. + ..+.|++++|+++|+.++||+..
T Consensus 56 -~---~~~v~~~D~s~~~~~~a~~~~~--~~~~~~~d---~-~~~~~~~~fD~v~~~~~l~~~~~--------------- 110 (259)
T 2p35_A 56 -G---VNVITGIDSDDDMLEKAADRLP--NTNFGKAD---L-ATWKPAQKADLLYANAVFQWVPD--------------- 110 (259)
T ss_dssp -C---TTSEEEEESCHHHHHHHHHHST--TSEEEECC---T-TTCCCSSCEEEEEEESCGGGSTT---------------
T ss_pred -C---CCEEEEEECCHHHHHHHHHhCC--CcEEEECC---h-hhcCccCCcCEEEEeCchhhCCC---------------
Confidence 1 1246666765443322222211 22344443 2 23347899999999999999632
Q ss_pred CceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCc
Q 017439 184 GHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIA 263 (371)
Q Consensus 184 g~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~ 263 (371)
...+|+.-.+-|+|||++++..++..+. .....+.++...+...
T Consensus 111 -----------------------~~~~l~~~~~~L~pgG~l~~~~~~~~~~-------------~~~~~~~~~~~~~~~~ 154 (259)
T 2p35_A 111 -----------------------HLAVLSQLMDQLESGGVLAVQMPDNLQE-------------PTHIAMHETADGGPWK 154 (259)
T ss_dssp -----------------------HHHHHHHHGGGEEEEEEEEEEEECCTTS-------------HHHHHHHHHHHHSTTG
T ss_pred -----------------------HHHHHHHHHHhcCCCeEEEEEeCCCCCc-------------HHHHHHHHHhcCcchH
Confidence 2236788889999999999998654221 1112233333322211
Q ss_pred hhhhccc-CcccccCCHHHHHHHhhcCCceEEEEEEEe-ecCcccccccHHHHHHhHHHh-hhhhhhhhhcHHHHHHHHH
Q 017439 264 EEKVDSF-NVPMYYPFLGELMGHIKRNKNFSIEIMNTF-THPLVHMVYSAEFWASLSRAA-FGGLVGQHFGYQFVDRIFN 340 (371)
Q Consensus 264 ~e~~d~f-n~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~-~~p~~~~~~~~~~~a~~iRa~-~~~~l~~h~ge~i~delf~ 340 (371)
. ..... ..+..+++.+++++++++.| |+++..+.. ..+ ..+++.+..++++. +.+.+ ..+.++..+++.+
T Consensus 155 ~-~~~~~~~~~~~~~~~~~~~~~l~~aG-f~v~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~ 227 (259)
T 2p35_A 155 D-AFSGGGLRRKPLPPPSDYFNALSPKS-SRVDVWHTVYNHP----MKDADSIVEWVKGTGLRPYL-AAAGEENREAFLA 227 (259)
T ss_dssp G-GC-------CCCCCHHHHHHHHGGGE-EEEEEEEEEEEEE----ESCHHHHHHHHTTTTTTHHH-HTTCGGGHHHHHH
T ss_pred H-HhccccccccCCCCHHHHHHHHHhcC-CceEEEEEEeeec----cCCchHHhhhhhcCcchHHH-HhCCHHHHHHHHH
Confidence 1 11111 23566789999999999987 987655543 222 23567788888864 34444 4678888889999
Q ss_pred HHHHHHHHhhh
Q 017439 341 YYSTKLAENMS 351 (371)
Q Consensus 341 r~~~~~~~~~~ 351 (371)
++.+.+.+.+.
T Consensus 228 ~~~~~~~~~~~ 238 (259)
T 2p35_A 228 DYTRRIAAAYP 238 (259)
T ss_dssp HHHHHHHHHSC
T ss_pred HHHHHHHHhCC
Confidence 99888887654
|
| >2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A | Back alignment and structure |
|---|
Probab=99.44 E-value=1.7e-12 Score=119.71 Aligned_cols=221 Identities=12% Similarity=0.045 Sum_probs=134.0
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC--Ccceeeecc
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL--SKKYFATGV 140 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~--~~~~f~~gv 140 (371)
...+|+|+|||+|..+..+. + + ..+++..|.-..--...-+.+.. .+--|..+.
T Consensus 39 ~~~~vLDiG~G~G~~~~~l~--------~-~---------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d 94 (263)
T 2yqz_A 39 EEPVFLELGVGTGRIALPLI--------A-R---------------GYRYIALDADAAMLEVFRQKIAGVDRKVQVVQAD 94 (263)
T ss_dssp SCCEEEEETCTTSTTHHHHH--------T-T---------------TCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESC
T ss_pred CCCEEEEeCCcCCHHHHHHH--------H-C---------------CCEEEEEECCHHHHHHHHHHhhccCCceEEEEcc
Confidence 45799999999999998776 2 1 01455566544332222222210 112233332
Q ss_pred CCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc
Q 017439 141 PGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP 220 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 220 (371)
+..--+|++++|+++++.++||+... ..+|+.-.+-|+|
T Consensus 95 ---~~~~~~~~~~fD~v~~~~~l~~~~~~--------------------------------------~~~l~~~~~~L~p 133 (263)
T 2yqz_A 95 ---ARAIPLPDESVHGVIVVHLWHLVPDW--------------------------------------PKVLAEAIRVLKP 133 (263)
T ss_dssp ---TTSCCSCTTCEEEEEEESCGGGCTTH--------------------------------------HHHHHHHHHHEEE
T ss_pred ---cccCCCCCCCeeEEEECCchhhcCCH--------------------------------------HHHHHHHHHHCCC
Confidence 22223678999999999999996431 2367777789999
Q ss_pred CceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHc-CCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEE
Q 017439 221 GGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANM-GLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNT 299 (371)
Q Consensus 221 GG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~e-Gli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~ 299 (371)
||++++.+...+ .. ....+...|.++... |.- ..-+...++.+++++.+++.| |+++..+.
T Consensus 134 gG~l~~~~~~~~-~~---------~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~ 195 (263)
T 2yqz_A 134 GGALLEGWDQAE-AS---------PEWTLQERWRAFAAEEGFP-------VERGLHAKRLKEVEEALRRLG-LKPRTREV 195 (263)
T ss_dssp EEEEEEEEEEEC-CC---------HHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHHHHHHHHTT-CCCEEEEE
T ss_pred CcEEEEEecCCC-cc---------HHHHHHHHHHHHHHHhCCC-------cccccccCCHHHHHHHHHHcC-CCcceEEE
Confidence 999999843321 10 101122333332221 211 112345678999999999987 99877765
Q ss_pred eecCcccccccHHHHHHhHHHhhhhhhhhhhcHHHHHHHHHHHHHHHHHhhhhhccCCCCCeEEEEEEEEeC
Q 017439 300 FTHPLVHMVYSAEFWASLSRAAFGGLVGQHFGYQFVDRIFNYYSTKLAENMSSICDGKTQDKIELFVLLRRN 371 (371)
Q Consensus 300 ~~~p~~~~~~~~~~~a~~iRa~~~~~l~~h~ge~i~delf~r~~~~~~~~~~~~~~~~~~~~~~~~~~L~r~ 371 (371)
.+.+. ..+.+.+..++++...+.. .+++++..+++.+++.+.+.+..... +....-...++++.-||
T Consensus 196 ~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~rk 262 (263)
T 2yqz_A 196 ARWRE---ERTPREALEALSERLYSFT-QGLPEPVHARVMERLWAWAEAELGDL-DRPFPVEKRFLLRVSRL 262 (263)
T ss_dssp EEEEE---EECHHHHHHHHHTTCSGGG-SSSCHHHHHHHHHHHHHHHHHHSSCT-TSCEEEEEEEEEEEEEC
T ss_pred eeeec---CCCHHHHHHHHHHhhcccc-cCCCHHHHHHHHHHHHHHHHHhcCCc-CccccccceeEEEeeec
Confidence 53222 3467778888877655554 46788888999999998888775432 11223345666666665
|
| >3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes} | Back alignment and structure |
|---|
Probab=99.20 E-value=2.6e-09 Score=99.18 Aligned_cols=192 Identities=14% Similarity=0.109 Sum_probs=111.1
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhc---CCC-Ccceeee
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKS---VPL-SKKYFAT 138 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~---l~~-~~~~f~~ 138 (371)
...+|+|+|||+|..+..+... + ..+|+..|+-..--...=+. ... .+--|..
T Consensus 61 ~~~~vLDiGcG~G~~~~~l~~~---------~--------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~ 117 (273)
T 3bus_A 61 SGDRVLDVGCGIGKPAVRLATA---------R--------------DVRVTGISISRPQVNQANARATAAGLANRVTFSY 117 (273)
T ss_dssp TTCEEEEESCTTSHHHHHHHHH---------S--------------CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHh---------c--------------CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEE
Confidence 4579999999999999877631 1 11344445433221111111 110 1112333
Q ss_pred ccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 139 GVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 139 gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
+ ++..--+|++++|+++|+.++||+... ..+|+.-++-|
T Consensus 118 ~---d~~~~~~~~~~fD~v~~~~~l~~~~~~--------------------------------------~~~l~~~~~~L 156 (273)
T 3bus_A 118 A---DAMDLPFEDASFDAVWALESLHHMPDR--------------------------------------GRALREMARVL 156 (273)
T ss_dssp C---CTTSCCSCTTCEEEEEEESCTTTSSCH--------------------------------------HHHHHHHHTTE
T ss_pred C---ccccCCCCCCCccEEEEechhhhCCCH--------------------------------------HHHHHHHHHHc
Confidence 2 233323678899999999999996331 23688888999
Q ss_pred ccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEE
Q 017439 219 VPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMN 298 (371)
Q Consensus 219 ~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e 298 (371)
+|||++++..+...+... ......+..+.. .+ -..+.++.+++++.+++.| |+++..+
T Consensus 157 ~pgG~l~i~~~~~~~~~~----------~~~~~~~~~~~~----------~~-~~~~~~~~~~~~~~l~~aG-f~~~~~~ 214 (273)
T 3bus_A 157 RPGGTVAIADFVLLAPVE----------GAKKEAVDAFRA----------GG-GVLSLGGIDEYESDVRQAE-LVVTSTV 214 (273)
T ss_dssp EEEEEEEEEEEEESSCCC----------HHHHHHHHHHHH----------HH-TCCCCCCHHHHHHHHHHTT-CEEEEEE
T ss_pred CCCeEEEEEEeeccCCCC----------hhHHHHHHHHHh----------hc-CccCCCCHHHHHHHHHHcC-CeEEEEE
Confidence 999999999876543211 111112221110 01 1234789999999999987 9999888
Q ss_pred EeecCcccccccHHHHHHhHHHhhhhhhhhhhcHHHHHHHHHHHHH
Q 017439 299 TFTHPLVHMVYSAEFWASLSRAAFGGLVGQHFGYQFVDRIFNYYST 344 (371)
Q Consensus 299 ~~~~p~~~~~~~~~~~a~~iRa~~~~~l~~h~ge~i~delf~r~~~ 344 (371)
.+...+. ..-..|...+++....+ ...+|++..+.+...+..
T Consensus 215 ~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 256 (273)
T 3bus_A 215 DISAQAR---PSLVKTAEAFENARSQV-EPFMGAEGLDRMIATFRG 256 (273)
T ss_dssp ECHHHHT---THHHHHHHHHHHTHHHH-HHHHCHHHHHHHHHHHHH
T ss_pred ECcHhHH---HHHHHHHHHHHHhHHHH-HhhcCHHHHHHHHHHHHH
Confidence 7743221 12233444444433333 345777777777666654
|
| >3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei} | Back alignment and structure |
|---|
Probab=99.16 E-value=9.1e-10 Score=100.00 Aligned_cols=171 Identities=13% Similarity=0.045 Sum_probs=112.1
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCC-cceeeecc
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLS-KKYFATGV 140 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~-~~~f~~gv 140 (371)
....+|+|+|||+|..+..+. + + .| ..+++..|+...-....-+.++.. +--|..+.
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~--------~-~----------~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d 100 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLM--------E-K----------YP---EATFTLVDMSEKMLEIAKNRFRGNLKVKYIEAD 100 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHH--------H-H----------CT---TCEEEEEESCHHHHHHHHHHTCSCTTEEEEESC
T ss_pred CCCCeEEEecCCCCHHHHHHH--------H-h----------CC---CCeEEEEECCHHHHHHHHHhhccCCCEEEEeCc
Confidence 446899999999999988776 3 2 12 346778887654433333333322 22344443
Q ss_pred CCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc
Q 017439 141 PGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP 220 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 220 (371)
+ ..+.+++++|+++++.++||+ |. .+...+|+.-++-|+|
T Consensus 101 ---~-~~~~~~~~fD~v~~~~~l~~~---~~---------------------------------~~~~~~l~~~~~~Lkp 140 (234)
T 3dtn_A 101 ---Y-SKYDFEEKYDMVVSALSIHHL---ED---------------------------------EDKKELYKRSYSILKE 140 (234)
T ss_dssp ---T-TTCCCCSCEEEEEEESCGGGS---CH---------------------------------HHHHHHHHHHHHHEEE
T ss_pred ---h-hccCCCCCceEEEEeCccccC---CH---------------------------------HHHHHHHHHHHHhcCC
Confidence 3 333444999999999999996 32 1223467777889999
Q ss_pred CceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhccc---CcccccCCHHHHHHHhhcCCceEEEEE
Q 017439 221 GGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSF---NVPMYYPFLGELMGHIKRNKNFSIEIM 297 (371)
Q Consensus 221 GG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f---n~P~Y~ps~eE~~~~i~~~g~F~I~~~ 297 (371)
||++++.....++.. .........|.....++..+.+++..+ .-..+.++.+|+++++++.| |++.++
T Consensus 141 gG~l~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aG-F~~v~~ 211 (234)
T 3dtn_A 141 SGIFINADLVHGETA--------FIENLNKTIWRQYVENSGLTEEEIAAGYERSKLDKDIEMNQQLNWLKEAG-FRDVSC 211 (234)
T ss_dssp EEEEEEEEECBCSSH--------HHHHHHHHHHHHHHHTSSCCHHHHHTTC----CCCCCBHHHHHHHHHHTT-CEEEEE
T ss_pred CcEEEEEEecCCCCh--------hhhhHHHHHHHHHHHhcCCCHHHHHHHHHhcccccccCHHHHHHHHHHcC-CCceee
Confidence 999999887665431 133455666777766666666655432 12334578999999999988 998877
Q ss_pred EEeecC
Q 017439 298 NTFTHP 303 (371)
Q Consensus 298 e~~~~p 303 (371)
.....+
T Consensus 212 ~~~~~~ 217 (234)
T 3dtn_A 212 IYKYYQ 217 (234)
T ss_dssp EEEETT
T ss_pred eeeecc
Confidence 654433
|
| >3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A* | Back alignment and structure |
|---|
Probab=99.06 E-value=4.2e-08 Score=92.97 Aligned_cols=213 Identities=14% Similarity=0.103 Sum_probs=115.0
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CCC-cceeee
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PLS-KKYFAT 138 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~~-~~~f~~ 138 (371)
...+|+|+|||+|..++.+... + + .+|+..|+-.+-....=+.+ .-. +--|..
T Consensus 72 ~~~~vLDiGcG~G~~~~~la~~---------~----------~----~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~ 128 (302)
T 3hem_A 72 PGMTLLDIGCGWGSTMRHAVAE---------Y----------D----VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRI 128 (302)
T ss_dssp TTCEEEEETCTTSHHHHHHHHH---------H----------C----CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEE
T ss_pred CcCEEEEeeccCcHHHHHHHHh---------C----------C----CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEE
Confidence 3579999999999999887732 1 0 13555555433221111111 111 122444
Q ss_pred ccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 139 GVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 139 gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
+.. ..+ ++++|+++|+.++|++.+.. .... .+++..+|+.-.+-|
T Consensus 129 ~d~----~~~--~~~fD~v~~~~~~~~~~d~~-~~~~----------------------------~~~~~~~l~~~~~~L 173 (302)
T 3hem_A 129 QGW----EEF--DEPVDRIVSLGAFEHFADGA-GDAG----------------------------FERYDTFFKKFYNLT 173 (302)
T ss_dssp CCG----GGC--CCCCSEEEEESCGGGTTCCS-SCCC----------------------------TTHHHHHHHHHHHSS
T ss_pred CCH----HHc--CCCccEEEEcchHHhcCccc-cccc----------------------------hhHHHHHHHHHHHhc
Confidence 442 223 78999999999999965531 1000 156677899999999
Q ss_pred ccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCccc-ccCCHHHHHHHhhcCCceEEEEE
Q 017439 219 VPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPM-YYPFLGELMGHIKRNKNFSIEIM 297 (371)
Q Consensus 219 ~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~-Y~ps~eE~~~~i~~~g~F~I~~~ 297 (371)
+|||++++......+.......+....++ ...+.+. +....+|. +.|+.+|+.+.+++.| |+++.+
T Consensus 174 kpgG~l~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~----------~~~~~~p~~~~~s~~~~~~~l~~aG-f~~~~~ 240 (302)
T 3hem_A 174 PDDGRMLLHTITIPDKEEAQELGLTSPMS--LLRFIKF----------ILTEIFPGGRLPRISQVDYYSSNAG-WKVERY 240 (302)
T ss_dssp CTTCEEEEEEEECCCHHHHHHHTCCCCHH--HHHHHHH----------HHHHTCTTCCCCCHHHHHHHHHHHT-CEEEEE
T ss_pred CCCcEEEEEEEeccCccchhhcccccccc--ccchHHH----------HHHhcCCCCCCCCHHHHHHHHHhCC-cEEEEE
Confidence 99999999987765321000000000000 0001111 11223343 6799999999999987 999999
Q ss_pred EEeecCcccccccHHHHHHhHHHhhhhhhhhhhcHHHHHHHHHHHHHHHHHhhh
Q 017439 298 NTFTHPLVHMVYSAEFWASLSRAAFGGLVGQHFGYQFVDRIFNYYSTKLAENMS 351 (371)
Q Consensus 298 e~~~~p~~~~~~~~~~~a~~iRa~~~~~l~~h~ge~i~delf~r~~~~~~~~~~ 351 (371)
+.+...+ ...-+.|...+++-...+. +.++++..+ .+..|-.-.+....
T Consensus 241 ~~~~~~y---~~tl~~w~~~~~~~~~~~~-~~~~~~~~~-~w~~yl~~~~~~f~ 289 (302)
T 3hem_A 241 HRIGANY---VPTLNAWADALQAHKDEAI-ALKGQETCD-IYMHYLRGCSDLFR 289 (302)
T ss_dssp EECGGGH---HHHHHHHHHHHHHTHHHHH-HHHCHHHHH-HHHHHHHHHHHHHH
T ss_pred EeCchhH---HHHHHHHHHHHHHhHHHHH-HHhCHHHHH-HHHHHHHHHHHHHh
Confidence 8763222 1122233333333322222 335655443 45555544444444
|
| >3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A* | Back alignment and structure |
|---|
Probab=99.05 E-value=9.7e-09 Score=94.34 Aligned_cols=207 Identities=14% Similarity=0.108 Sum_probs=113.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CC-Ccceeee
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PL-SKKYFAT 138 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~-~~~~f~~ 138 (371)
...+|+|+|||+|..+..+.. + .| . +|+..|+-..-....=+.+ .. .+-.|..
T Consensus 46 ~~~~vLDiG~G~G~~~~~l~~---------~----------~~---~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~ 102 (257)
T 3f4k_A 46 DDAKIADIGCGTGGQTLFLAD---------Y----------VK---G-QITGIDLFPDFIEIFNENAVKANCADRVKGIT 102 (257)
T ss_dssp TTCEEEEETCTTSHHHHHHHH---------H----------CC---S-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHH---------h----------CC---C-eEEEEECCHHHHHHHHHHHHHcCCCCceEEEE
Confidence 346999999999999888772 1 11 2 4555555433222111111 11 1122333
Q ss_pred ccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 139 GVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 139 gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
+. +..--+|++++|+++|+.++||+ . | ..+|+.-.+-|
T Consensus 103 ~d---~~~~~~~~~~fD~v~~~~~l~~~-~-~-------------------------------------~~~l~~~~~~L 140 (257)
T 3f4k_A 103 GS---MDNLPFQNEELDLIWSEGAIYNI-G-F-------------------------------------ERGMNEWSKYL 140 (257)
T ss_dssp CC---TTSCSSCTTCEEEEEEESCSCCC-C-H-------------------------------------HHHHHHHHTTE
T ss_pred CC---hhhCCCCCCCEEEEEecChHhhc-C-H-------------------------------------HHHHHHHHHHc
Confidence 33 22212578999999999999996 1 2 12577777899
Q ss_pred ccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEE
Q 017439 219 VPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMN 298 (371)
Q Consensus 219 ~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e 298 (371)
+|||++++..+....... ...+...|.... |. .++.+++.+.+++.| |+++...
T Consensus 141 ~pgG~l~~~~~~~~~~~~---------~~~~~~~~~~~~---------------~~-~~~~~~~~~~l~~aG-f~~v~~~ 194 (257)
T 3f4k_A 141 KKGGFIAVSEASWFTSER---------PAEIEDFWMDAY---------------PE-ISVIPTCIDKMERAG-YTPTAHF 194 (257)
T ss_dssp EEEEEEEEEEEEESSSCC---------CHHHHHHHHHHC---------------TT-CCBHHHHHHHHHHTT-EEEEEEE
T ss_pred CCCcEEEEEEeeccCCCC---------hHHHHHHHHHhC---------------CC-CCCHHHHHHHHHHCC-CeEEEEE
Confidence 999999999865332211 122333343210 11 578999999999987 9998877
Q ss_pred Eee-cCcccccccHHHHHHhHHHhhhhhhhhhhcHHHHHHHHHHHHHHHHHhhhhhccCCCCCeEEEEEEEEeC
Q 017439 299 TFT-HPLVHMVYSAEFWASLSRAAFGGLVGQHFGYQFVDRIFNYYSTKLAENMSSICDGKTQDKIELFVLLRRN 371 (371)
Q Consensus 299 ~~~-~p~~~~~~~~~~~a~~iRa~~~~~l~~h~ge~i~delf~r~~~~~~~~~~~~~~~~~~~~~~~~~~L~r~ 371 (371)
..+ .+|...... .++...+.+...+-++...+++.++..+..... .++ ....--.+++++|+
T Consensus 195 ~~~~~~w~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~g~~~~v~~k~ 257 (257)
T 3f4k_A 195 ILPENCWTEHYFA------PQDEVRETFMKEHAGNKTAMDFMKGQQYERSLY-SKY----KDYYGYVFYIGQKR 257 (257)
T ss_dssp ECCGGGTCCCCCH------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-HHH----TTTEEEEEEEEEEC
T ss_pred ECChhhHHHHHHH------HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH-HHh----CCccceEEEEEecC
Confidence 664 344221111 111222222233334455555555554444322 222 11234456677774
|
| >1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41 | Back alignment and structure |
|---|
Probab=99.04 E-value=4.9e-09 Score=96.94 Aligned_cols=154 Identities=14% Similarity=0.140 Sum_probs=91.4
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CCCcceeeec
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PLSKKYFATG 139 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~~~~~f~~g 139 (371)
...+|+|+|||+|..+..+. + + . . +++..|+-..--...=+.+ ...+--|..+
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~--------~-~----------~----~-~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~ 92 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFA--------P-F----------V----K-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQG 92 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHG--------G-G----------S----S-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred CCCEEEEEeCCCCHHHHHHH--------H-h----------C----C-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEe
Confidence 45799999999999887665 2 1 1 1 4555565432211111111 0011223333
Q ss_pred cCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcc
Q 017439 140 VPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELV 219 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 219 (371)
. +..--+|++++|+++|+.++||+...+ .+|+.-.+-|+
T Consensus 93 d---~~~l~~~~~~fD~V~~~~~l~~~~d~~--------------------------------------~~l~~~~r~Lk 131 (260)
T 1vl5_A 93 D---AEQMPFTDERFHIVTCRIAAHHFPNPA--------------------------------------SFVSEAYRVLK 131 (260)
T ss_dssp C---C-CCCSCTTCEEEEEEESCGGGCSCHH--------------------------------------HHHHHHHHHEE
T ss_pred c---HHhCCCCCCCEEEEEEhhhhHhcCCHH--------------------------------------HHHHHHHHHcC
Confidence 3 222236889999999999999964321 26777778999
Q ss_pred cCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEE
Q 017439 220 PGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNT 299 (371)
Q Consensus 220 pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~ 299 (371)
|||++++.....++. + .+..+...+..+.. .......+.+++.+++++.| |++..++.
T Consensus 132 pgG~l~~~~~~~~~~-~--------~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~l~~aG-f~~~~~~~ 189 (260)
T 1vl5_A 132 KGGQLLLVDNSAPEN-D--------AFDVFYNYVEKERD------------YSHHRAWKKSDWLKMLEEAG-FELEELHC 189 (260)
T ss_dssp EEEEEEEEEEEBCSS-H--------HHHHHHHHHHHHHC------------TTCCCCCBHHHHHHHHHHHT-CEEEEEEE
T ss_pred CCCEEEEEEcCCCCC-H--------HHHHHHHHHHHhcC------------ccccCCCCHHHHHHHHHHCC-CeEEEEEE
Confidence 999999986554322 1 12222222221111 01223568999999999977 99988887
Q ss_pred eecC
Q 017439 300 FTHP 303 (371)
Q Consensus 300 ~~~p 303 (371)
...+
T Consensus 190 ~~~~ 193 (260)
T 1vl5_A 190 FHKT 193 (260)
T ss_dssp EEEE
T ss_pred eecc
Confidence 7543
|
| >1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=7.7e-09 Score=94.80 Aligned_cols=155 Identities=15% Similarity=0.194 Sum_probs=91.4
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CCCcceeee
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PLSKKYFAT 138 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~~~~~f~~ 138 (371)
....+|+|+|||+|..+..+. + . .+ +++..|+-..-....=+.+ ...+--|..
T Consensus 20 ~~~~~vLDiGcG~G~~~~~l~--------~-~----------~~-----~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~ 75 (239)
T 1xxl_A 20 RAEHRVLDIGAGAGHTALAFS--------P-Y----------VQ-----ECIGVDATKEMVEVASSFAQEKGVENVRFQQ 75 (239)
T ss_dssp CTTCEEEEESCTTSHHHHHHG--------G-G----------SS-----EEEEEESCHHHHHHHHHHHHHHTCCSEEEEE
T ss_pred CCCCEEEEEccCcCHHHHHHH--------H-h----------CC-----EEEEEECCHHHHHHHHHHHHHcCCCCeEEEe
Confidence 446799999999999887665 2 1 11 3555555332221111111 001112333
Q ss_pred ccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 139 GVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 139 gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
+. +..--+|++++|+++|+.++||+... ..+|+.-++-|
T Consensus 76 ~d---~~~~~~~~~~fD~v~~~~~l~~~~~~--------------------------------------~~~l~~~~~~L 114 (239)
T 1xxl_A 76 GT---AESLPFPDDSFDIITCRYAAHHFSDV--------------------------------------RKAVREVARVL 114 (239)
T ss_dssp CB---TTBCCSCTTCEEEEEEESCGGGCSCH--------------------------------------HHHHHHHHHHE
T ss_pred cc---cccCCCCCCcEEEEEECCchhhccCH--------------------------------------HHHHHHHHHHc
Confidence 32 22222678999999999999996431 23677777899
Q ss_pred ccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEE
Q 017439 219 VPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMN 298 (371)
Q Consensus 219 ~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e 298 (371)
+|||++++.....++. + ..+.+.+.+..+. .+ ......+.+|+.+++++.| |++..++
T Consensus 115 kpgG~l~~~~~~~~~~-~--------~~~~~~~~~~~~~-~~-----------~~~~~~~~~~~~~ll~~aG-f~~~~~~ 172 (239)
T 1xxl_A 115 KQDGRFLLVDHYAPED-P--------VLDEFVNHLNRLR-DP-----------SHVRESSLSEWQAMFSANQ-LAYQDIQ 172 (239)
T ss_dssp EEEEEEEEEEECBCSS-H--------HHHHHHHHHHHHH-CT-----------TCCCCCBHHHHHHHHHHTT-EEEEEEE
T ss_pred CCCcEEEEEEcCCCCC-h--------hHHHHHHHHHHhc-cc-----------cccCCCCHHHHHHHHHHCC-CcEEEEE
Confidence 9999999987654322 1 1222222222111 11 1123468999999999987 9998888
Q ss_pred EeecC
Q 017439 299 TFTHP 303 (371)
Q Consensus 299 ~~~~p 303 (371)
....+
T Consensus 173 ~~~~~ 177 (239)
T 1xxl_A 173 KWNLP 177 (239)
T ss_dssp EEEEE
T ss_pred eecCc
Confidence 76443
|
| >3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A* | Back alignment and structure |
|---|
Probab=99.00 E-value=2.5e-08 Score=91.61 Aligned_cols=153 Identities=16% Similarity=0.147 Sum_probs=96.3
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC-Ccceeeecc
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL-SKKYFATGV 140 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~-~~~~f~~gv 140 (371)
....+|+|+|||+|..+..+... +. .+|+.-|+...-....-+.... .+--|..+.
T Consensus 54 ~~~~~vLdiG~G~G~~~~~l~~~---------~~--------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d 110 (266)
T 3ujc_A 54 NENSKVLDIGSGLGGGCMYINEK---------YG--------------AHTHGIDICSNIVNMANERVSGNNKIIFEAND 110 (266)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHH---------HC--------------CEEEEEESCHHHHHHHHHTCCSCTTEEEEECC
T ss_pred CCCCEEEEECCCCCHHHHHHHHH---------cC--------------CEEEEEeCCHHHHHHHHHHhhcCCCeEEEECc
Confidence 34579999999999999887732 10 1355555544332222222221 112233333
Q ss_pred CCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc
Q 017439 141 PGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP 220 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 220 (371)
+..--+|++++|+|+|+.++||+ |. .|...+|+.-.+-|+|
T Consensus 111 ---~~~~~~~~~~fD~v~~~~~l~~~---~~---------------------------------~~~~~~l~~~~~~L~p 151 (266)
T 3ujc_A 111 ---ILTKEFPENNFDLIYSRDAILAL---SL---------------------------------ENKNKLFQKCYKWLKP 151 (266)
T ss_dssp ---TTTCCCCTTCEEEEEEESCGGGS---CH---------------------------------HHHHHHHHHHHHHEEE
T ss_pred ---cccCCCCCCcEEEEeHHHHHHhc---Ch---------------------------------HHHHHHHHHHHHHcCC
Confidence 22223678999999999999995 31 3555688888899999
Q ss_pred CceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEe
Q 017439 221 GGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTF 300 (371)
Q Consensus 221 GG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~ 300 (371)
||++++..+..++..+ ....+...+. ..| ...++.+++++.+++.| |++...+.+
T Consensus 152 gG~l~~~~~~~~~~~~--------~~~~~~~~~~---~~~-------------~~~~~~~~~~~~l~~~G-f~~~~~~~~ 206 (266)
T 3ujc_A 152 TGTLLITDYCATEKEN--------WDDEFKEYVK---QRK-------------YTLITVEEYADILTACN-FKNVVSKDL 206 (266)
T ss_dssp EEEEEEEEEEESCGGG--------CCHHHHHHHH---HHT-------------CCCCCHHHHHHHHHHTT-CEEEEEEEC
T ss_pred CCEEEEEEeccCCccc--------chHHHHHHHh---cCC-------------CCCCCHHHHHHHHHHcC-CeEEEEEeC
Confidence 9999999876654211 1122222221 111 23679999999999987 999888765
Q ss_pred e
Q 017439 301 T 301 (371)
Q Consensus 301 ~ 301 (371)
.
T Consensus 207 ~ 207 (266)
T 3ujc_A 207 S 207 (266)
T ss_dssp H
T ss_pred C
Confidence 3
|
| >1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A* | Back alignment and structure |
|---|
Probab=98.98 E-value=6.8e-08 Score=90.48 Aligned_cols=160 Identities=16% Similarity=0.214 Sum_probs=89.2
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CC-Ccceeee
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PL-SKKYFAT 138 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~-~~~~f~~ 138 (371)
...+|+|+|||+|..+..+... + + . +|+..|+-.+--...=+.+ .. .+--|..
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~---------~----------~---~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~ 120 (287)
T 1kpg_A 64 PGMTLLDVGCGWGATMMRAVEK---------Y----------D---V-NVVGLTLSKNQANHVQQLVANSENLRSKRVLL 120 (287)
T ss_dssp TTCEEEEETCTTSHHHHHHHHH---------H----------C---C-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEE
T ss_pred CcCEEEEECCcccHHHHHHHHH---------c----------C---C-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEE
Confidence 3569999999999998877621 1 0 1 3444444332211111111 00 1112222
Q ss_pred ccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 139 GVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 139 gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
+. + .. +| +++|+|+|..++|++.. +|+..+|+.-.+-|
T Consensus 121 ~d---~-~~-~~-~~fD~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~L 158 (287)
T 1kpg_A 121 AG---W-EQ-FD-EPVDRIVSIGAFEHFGH------------------------------------ERYDAFFSLAHRLL 158 (287)
T ss_dssp SC---G-GG-CC-CCCSEEEEESCGGGTCT------------------------------------TTHHHHHHHHHHHS
T ss_pred CC---h-hh-CC-CCeeEEEEeCchhhcCh------------------------------------HHHHHHHHHHHHhc
Confidence 22 1 22 24 78999999999999532 23445788888899
Q ss_pred ccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcc-cccCCHHHHHHHhhcCCceEEEEE
Q 017439 219 VPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVP-MYYPFLGELMGHIKRNKNFSIEIM 297 (371)
Q Consensus 219 ~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P-~Y~ps~eE~~~~i~~~g~F~I~~~ 297 (371)
+|||++++..+...+.......+....+.. ..+.+...+. ..| ...|+.+|+++.+++.| |+++..
T Consensus 159 kpgG~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~----------~~~~~~~~s~~~~~~~l~~aG-f~~~~~ 225 (287)
T 1kpg_A 159 PADGVMLLHTITGLHPKEIHERGLPMSFTF--ARFLKFIVTE----------IFPGGRLPSIPMVQECASANG-FTVTRV 225 (287)
T ss_dssp CTTCEEEEEEEEECCHHHHTTTTCSCHHHH--HHHHHHHHHH----------TSTTCCCCCHHHHHHHHHTTT-CEEEEE
T ss_pred CCCCEEEEEEecCCCccccccccccccccc--cchhhhHHhe----------eCCCCCCCCHHHHHHHHHhCC-cEEEEE
Confidence 999999999877643211000000000110 0111111111 112 24579999999999977 999988
Q ss_pred EEe
Q 017439 298 NTF 300 (371)
Q Consensus 298 e~~ 300 (371)
+.+
T Consensus 226 ~~~ 228 (287)
T 1kpg_A 226 QSL 228 (287)
T ss_dssp EEC
T ss_pred EeC
Confidence 765
|
| >3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian} | Back alignment and structure |
|---|
Probab=98.94 E-value=5.5e-09 Score=93.78 Aligned_cols=161 Identities=16% Similarity=0.144 Sum_probs=100.9
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPG 142 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpg 142 (371)
...+|+|+|||+|..+..+. + + ..+++.-|....--...=+.++ .+--|..+.
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~--------~-~---------------~~~v~~vD~s~~~~~~a~~~~~-~~~~~~~~d-- 97 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLL--------L-A---------------GRTVYGIEPSREMRMIAKEKLP-KEFSITEGD-- 97 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHH--------H-T---------------TCEEEEECSCHHHHHHHHHHSC-TTCCEESCC--
T ss_pred CCCeEEEeCCCCCHHHHHHH--------h-C---------------CCeEEEEeCCHHHHHHHHHhCC-CceEEEeCC--
Confidence 35699999999999888776 2 1 1246666765543332222233 122233333
Q ss_pred CcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCc
Q 017439 143 SFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGG 222 (371)
Q Consensus 143 SFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 222 (371)
+.+--+| +++|+++++.++||+.. | +...+|+.-.+-|+|||
T Consensus 98 -~~~~~~~-~~fD~v~~~~~l~~~~~-~-----------------------------------~~~~~l~~~~~~LkpgG 139 (220)
T 3hnr_A 98 -FLSFEVP-TSIDTIVSTYAFHHLTD-D-----------------------------------EKNVAIAKYSQLLNKGG 139 (220)
T ss_dssp -SSSCCCC-SCCSEEEEESCGGGSCH-H-----------------------------------HHHHHHHHHHHHSCTTC
T ss_pred -hhhcCCC-CCeEEEEECcchhcCCh-H-----------------------------------HHHHHHHHHHHhcCCCC
Confidence 3332344 99999999999999533 1 11336777888999999
Q ss_pred eEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEeec
Q 017439 223 LLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFTH 302 (371)
Q Consensus 223 ~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~~~ 302 (371)
++++..+...+. ......+..+...|.... ..-..+.++++.+|+++.+++.| |+++..+....
T Consensus 140 ~l~i~~~~~~~~------------~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~aG-f~v~~~~~~~~ 203 (220)
T 3hnr_A 140 KIVFADTIFADQ------------DAYDKTVEAAKQRGFHQL---ANDLQTEYYTRIPVMQTIFENNG-FHVTFTRLNHF 203 (220)
T ss_dssp EEEEEEECBSSH------------HHHHHHHHHHHHTTCHHH---HHHHHHSCCCBHHHHHHHHHHTT-EEEEEEECSSS
T ss_pred EEEEEeccccCh------------HHHHHHHHHHHhCCCccc---hhhcchhhcCCHHHHHHHHHHCC-CEEEEeeccce
Confidence 999997554332 223333444445554321 11122456789999999999987 99988876654
Q ss_pred Cc
Q 017439 303 PL 304 (371)
Q Consensus 303 p~ 304 (371)
.|
T Consensus 204 ~w 205 (220)
T 3hnr_A 204 VW 205 (220)
T ss_dssp EE
T ss_pred EE
Confidence 44
|
| >3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=98.93 E-value=6e-09 Score=92.50 Aligned_cols=143 Identities=16% Similarity=0.016 Sum_probs=94.2
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCCC
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPGS 143 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpgS 143 (371)
..+|+|+|||+|..+..+. + + ..+++.-|+-..--...=+..+ +--|..+ .
T Consensus 42 ~~~vLDiGcG~G~~~~~l~--------~-~---------------~~~v~gvD~s~~~~~~a~~~~~--~~~~~~~---d 92 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLA--------S-L---------------GHQIEGLEPATRLVELARQTHP--SVTFHHG---T 92 (203)
T ss_dssp CSCEEEETCTTCHHHHHHH--------H-T---------------TCCEEEECCCHHHHHHHHHHCT--TSEEECC---C
T ss_pred CCeEEEecCCCCHHHHHHH--------h-c---------------CCeEEEEeCCHHHHHHHHHhCC--CCeEEeC---c
Confidence 4689999999999888776 2 1 0135555654322111111111 1123333 2
Q ss_pred cccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCce
Q 017439 144 FHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGL 223 (371)
Q Consensus 144 Fy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~ 223 (371)
+..--+|++++|+++++.++|++.. +|...+|+.-++-|+|||+
T Consensus 93 ~~~~~~~~~~fD~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~L~pgG~ 136 (203)
T 3h2b_A 93 ITDLSDSPKRWAGLLAWYSLIHMGP------------------------------------GELPDALVALRMAVEDGGG 136 (203)
T ss_dssp GGGGGGSCCCEEEEEEESSSTTCCT------------------------------------TTHHHHHHHHHHTEEEEEE
T ss_pred ccccccCCCCeEEEEehhhHhcCCH------------------------------------HHHHHHHHHHHHHcCCCcE
Confidence 3332357899999999999999641 2445578888899999999
Q ss_pred EEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEeec
Q 017439 224 LLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFTH 302 (371)
Q Consensus 224 lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~~~ 302 (371)
+++.......... ++....+.+..+.+|+++++++.| |+++.++.++.
T Consensus 137 l~i~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~~~ 184 (203)
T 3h2b_A 137 LLMSFFSGPSLEP------------------------------MYHPVATAYRWPLPELAQALETAG-FQVTSSHWDPR 184 (203)
T ss_dssp EEEEEECCSSCEE------------------------------ECCSSSCEEECCHHHHHHHHHHTT-EEEEEEEECTT
T ss_pred EEEEEccCCchhh------------------------------hhchhhhhccCCHHHHHHHHHHCC-CcEEEEEecCC
Confidence 9999876544211 111223566789999999999987 99999988743
|
| >3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei} | Back alignment and structure |
|---|
Probab=98.93 E-value=2.9e-08 Score=92.35 Aligned_cols=161 Identities=16% Similarity=0.174 Sum_probs=94.6
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CCCcceeee
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PLSKKYFAT 138 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~~~~~f~~ 138 (371)
+...+|+|+|||+|..+..+. + + .| ..+++..|.-.+-....=+.+ ...+-.|..
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~--------~-~----------~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~ 93 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILA--------K-N----------NP---DAEITSIDISPESLEKARENTEKNGIKNVKFLQ 93 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHH--------H-H----------CT---TSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHH--------H-h----------CC---CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEE
Confidence 346799999999999887766 2 1 12 236777776544322221111 111222333
Q ss_pred ccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 139 GVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 139 gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
+ ....-.+|++++|+|+++.++||+...+ .+|+.-.+-|
T Consensus 94 ~---d~~~~~~~~~~fD~v~~~~~l~~~~~~~--------------------------------------~~l~~~~~~L 132 (276)
T 3mgg_A 94 A---NIFSLPFEDSSFDHIFVCFVLEHLQSPE--------------------------------------EALKSLKKVL 132 (276)
T ss_dssp C---CGGGCCSCTTCEEEEEEESCGGGCSCHH--------------------------------------HHHHHHHHHE
T ss_pred c---ccccCCCCCCCeeEEEEechhhhcCCHH--------------------------------------HHHHHHHHHc
Confidence 3 2334446889999999999999964321 2677777899
Q ss_pred ccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHH-HHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEE
Q 017439 219 VPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDL-ANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIM 297 (371)
Q Consensus 219 ~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~m-v~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~ 297 (371)
+|||.+++............ ......... ..+..+ ...|. ...+.+++..++++.| |++..+
T Consensus 133 ~pgG~l~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~-------------~~~~~~~l~~~l~~aG-f~~v~~ 195 (276)
T 3mgg_A 133 KPGGTITVIEGDHGSCYFHP--EGKKAIEAW-NCLIRVQAYMKG-------------NSLVGRQIYPLLQESG-FEKIRV 195 (276)
T ss_dssp EEEEEEEEEEECGGGCEEES--CCHHHHHHH-HHHHHHHHHTTC-------------CTTGGGGHHHHHHHTT-CEEEEE
T ss_pred CCCcEEEEEEcCCCCceECC--CcHHHHHHH-HHHHHHHHhcCC-------------CcchHHHHHHHHHHCC-CCeEEE
Confidence 99999999886543221000 011111111 122211 11121 1346689999999987 999888
Q ss_pred EEeec
Q 017439 298 NTFTH 302 (371)
Q Consensus 298 e~~~~ 302 (371)
+....
T Consensus 196 ~~~~~ 200 (276)
T 3mgg_A 196 EPRMV 200 (276)
T ss_dssp EEEEE
T ss_pred eeEEE
Confidence 87643
|
| >3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A* | Back alignment and structure |
|---|
Probab=98.92 E-value=4.9e-08 Score=90.61 Aligned_cols=152 Identities=17% Similarity=0.122 Sum_probs=96.0
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CC-Ccceee
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PL-SKKYFA 137 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~-~~~~f~ 137 (371)
....+|+|+|||+|..++.+. + . | ..+|+..|+-..-....=+.+ .- .+--|.
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la--------~-~-----------~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~ 101 (267)
T 3kkz_A 45 TEKSLIADIGCGTGGQTMVLA--------G-H-----------V---TGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGI 101 (267)
T ss_dssp CTTCEEEEETCTTCHHHHHHH--------T-T-----------C---SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHH--------h-c-----------c---CCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEE
Confidence 346799999999999988776 2 1 1 235667776544322221111 11 112344
Q ss_pred eccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 138 TGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 138 ~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
.+. +.+--+|++++|+|+|+.++|++ . | ..+|+.-.+-
T Consensus 102 ~~d---~~~~~~~~~~fD~i~~~~~~~~~-~-~-------------------------------------~~~l~~~~~~ 139 (267)
T 3kkz_A 102 VGS---MDDLPFRNEELDLIWSEGAIYNI-G-F-------------------------------------ERGLNEWRKY 139 (267)
T ss_dssp ECC---TTSCCCCTTCEEEEEESSCGGGT-C-H-------------------------------------HHHHHHHGGG
T ss_pred EcC---hhhCCCCCCCEEEEEEcCCceec-C-H-------------------------------------HHHHHHHHHH
Confidence 443 22222578999999999999996 2 2 1267778889
Q ss_pred cccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEE
Q 017439 218 LVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIM 297 (371)
Q Consensus 218 L~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~ 297 (371)
|+|||++++..+....... ...+...|.+ . .| ..++.+++.+.+++.| |+++..
T Consensus 140 LkpgG~l~~~~~~~~~~~~---------~~~~~~~~~~----~-----------~~-~~~~~~~~~~~l~~aG-f~~v~~ 193 (267)
T 3kkz_A 140 LKKGGYLAVSECSWFTDER---------PAEINDFWMD----A-----------YP-EIDTIPNQVAKIHKAG-YLPVAT 193 (267)
T ss_dssp EEEEEEEEEEEEEESSSCC---------CHHHHHHHHH----H-----------CT-TCEEHHHHHHHHHHTT-EEEEEE
T ss_pred cCCCCEEEEEEeeecCCCC---------hHHHHHHHHH----h-----------CC-CCCCHHHHHHHHHHCC-CEEEEE
Confidence 9999999999875432211 1223333431 1 12 3679999999999987 999988
Q ss_pred EEee-cCc
Q 017439 298 NTFT-HPL 304 (371)
Q Consensus 298 e~~~-~p~ 304 (371)
+.++ .+|
T Consensus 194 ~~~~~~~w 201 (267)
T 3kkz_A 194 FILPENCW 201 (267)
T ss_dssp EECCGGGT
T ss_pred EECCHhHH
Confidence 8774 344
|
| >3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=98.90 E-value=1.4e-08 Score=92.47 Aligned_cols=141 Identities=16% Similarity=0.074 Sum_probs=96.0
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCC----cceeeec
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLS----KKYFATG 139 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~----~~~f~~g 139 (371)
..+|+|+|||+|..+..+. . + ..+|+..|.-..-....-+.++.. +--|..+
T Consensus 67 ~~~vLDiGcG~G~~~~~l~--------~-------------~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~ 122 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMA--------S-------------P---ERFVVGLDISESALAKANETYGSSPKAEYFSFVKE 122 (235)
T ss_dssp CEEEEEETCTTCHHHHHHC--------B-------------T---TEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECC
T ss_pred CCCEEEeCCCCCHHHHHHH--------h-------------C---CCeEEEEECCHHHHHHHHHHhhccCCCcceEEEEC
Confidence 3599999999999888654 1 1 235777777554433332333221 1234444
Q ss_pred cCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcc
Q 017439 140 VPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELV 219 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 219 (371)
. ...+.|++++|+++++.++||+. . +|...+|+.-++-|+
T Consensus 123 d----~~~~~~~~~fD~v~~~~~l~~~~---~---------------------------------~~~~~~l~~~~~~Lk 162 (235)
T 3lcc_A 123 D----VFTWRPTELFDLIFDYVFFCAIE---P---------------------------------EMRPAWAKSMYELLK 162 (235)
T ss_dssp C----TTTCCCSSCEEEEEEESSTTTSC---G---------------------------------GGHHHHHHHHHHHEE
T ss_pred c----hhcCCCCCCeeEEEEChhhhcCC---H---------------------------------HHHHHHHHHHHHHCC
Confidence 4 23355788999999999999953 2 344557888889999
Q ss_pred cCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEE
Q 017439 220 PGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNT 299 (371)
Q Consensus 220 pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~ 299 (371)
|||++++........ ..-|.|..+.+|+++++++.| |+++.++.
T Consensus 163 pgG~l~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~ 206 (235)
T 3lcc_A 163 PDGELITLMYPITDH-----------------------------------VGGPPYKVDVSTFEEVLVPIG-FKAVSVEE 206 (235)
T ss_dssp EEEEEEEEECCCSCC-----------------------------------CSCSSCCCCHHHHHHHHGGGT-EEEEEEEE
T ss_pred CCcEEEEEEeccccc-----------------------------------CCCCCccCCHHHHHHHHHHcC-CeEEEEEe
Confidence 999999877654321 011345578999999999987 99999998
Q ss_pred eecCc
Q 017439 300 FTHPL 304 (371)
Q Consensus 300 ~~~p~ 304 (371)
.+.+.
T Consensus 207 ~~~~~ 211 (235)
T 3lcc_A 207 NPHAI 211 (235)
T ss_dssp CTTCC
T ss_pred cCCcc
Confidence 75443
|
| >2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18 | Back alignment and structure |
|---|
Probab=98.90 E-value=1.1e-07 Score=89.45 Aligned_cols=150 Identities=15% Similarity=0.097 Sum_probs=91.5
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CC-Ccceeee
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PL-SKKYFAT 138 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~-~~~~f~~ 138 (371)
...+|+|+|||+|..+..+... + ..+++..|+...--...=+.+ .. .+--|..
T Consensus 82 ~~~~vLDiGcG~G~~~~~l~~~---------~--------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~ 138 (297)
T 2o57_A 82 RQAKGLDLGAGYGGAARFLVRK---------F--------------GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKY 138 (297)
T ss_dssp TTCEEEEETCTTSHHHHHHHHH---------H--------------CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHH---------h--------------CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEE
Confidence 4579999999999999877621 1 014555555433211111111 10 1112333
Q ss_pred ccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 139 GVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 139 gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
+ ++..--+|++++|++++..++||+.. | ..+|+.-++-|
T Consensus 139 ~---d~~~~~~~~~~fD~v~~~~~l~~~~~-~-------------------------------------~~~l~~~~~~L 177 (297)
T 2o57_A 139 G---SFLEIPCEDNSYDFIWSQDAFLHSPD-K-------------------------------------LKVFQECARVL 177 (297)
T ss_dssp C---CTTSCSSCTTCEEEEEEESCGGGCSC-H-------------------------------------HHHHHHHHHHE
T ss_pred c---CcccCCCCCCCEeEEEecchhhhcCC-H-------------------------------------HHHHHHHHHHc
Confidence 3 33332367899999999999999644 1 13677778899
Q ss_pred ccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEE
Q 017439 219 VPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMN 298 (371)
Q Consensus 219 ~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e 298 (371)
+|||++++..+...+..+. ..+...+.. +..| ..++.+++++++++.| |+++..+
T Consensus 178 kpgG~l~~~~~~~~~~~~~---------~~~~~~~~~--------------~~~~-~~~~~~~~~~~l~~aG-f~~~~~~ 232 (297)
T 2o57_A 178 KPRGVMAITDPMKEDGIDK---------SSIQPILDR--------------IKLH-DMGSLGLYRSLAKECG-LVTLRTF 232 (297)
T ss_dssp EEEEEEEEEEEEECTTCCG---------GGGHHHHHH--------------HTCS-SCCCHHHHHHHHHHTT-EEEEEEE
T ss_pred CCCeEEEEEEeccCCCCch---------HHHHHHHHH--------------hcCC-CCCCHHHHHHHHHHCC-CeEEEEE
Confidence 9999999998765543210 011111211 1112 2579999999999987 9998887
Q ss_pred Eee
Q 017439 299 TFT 301 (371)
Q Consensus 299 ~~~ 301 (371)
.+.
T Consensus 233 ~~~ 235 (297)
T 2o57_A 233 SRP 235 (297)
T ss_dssp ECH
T ss_pred ECc
Confidence 663
|
| >2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=6.9e-09 Score=98.18 Aligned_cols=160 Identities=12% Similarity=0.127 Sum_probs=90.3
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC---CCcce-e-
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP---LSKKY-F- 136 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~---~~~~~-f- 136 (371)
....+|+|+|||+|..|+.++..+ .. ++. .- .+.+...|.-.+--...=+.+. ...++ |
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l----~~-~~~--------~~---~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~ 114 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKV----QA-QYP--------GV---CINNEVVEPSAEQIAKYKELVAKTSNLENVKFA 114 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHH----HH-HST--------TC---EEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHH----Hh-hCC--------Cc---eeeEEEEeCCHHHHHHHHHHHHhccCCCcceEE
Confidence 356899999999998776665433 22 210 00 2344777765544332222111 11111 1
Q ss_pred -eeccCCCccc---ccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHH
Q 017439 137 -ATGVPGSFHG---RLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLN 212 (371)
Q Consensus 137 -~~gvpgSFy~---rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~ 212 (371)
..+..-.+-. +=++++++|+|+++.+|||+.+. ..+|+
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~d~--------------------------------------~~~l~ 156 (292)
T 2aot_A 115 WHKETSSEYQSRMLEKKELQKWDFIHMIQMLYYVKDI--------------------------------------PATLK 156 (292)
T ss_dssp EECSCHHHHHHHHHTTTCCCCEEEEEEESCGGGCSCH--------------------------------------HHHHH
T ss_pred EEecchhhhhhhhccccCCCceeEEEEeeeeeecCCH--------------------------------------HHHHH
Confidence 1221101111 11578999999999999995442 23577
Q ss_pred HHHhhcccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCce
Q 017439 213 ARAQELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNF 292 (371)
Q Consensus 213 ~Ra~EL~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F 292 (371)
.-++-|||||++++.....+. .|.. .|..... . +... -...+++.+|+.+.+++.| |
T Consensus 157 ~~~r~LkpgG~l~i~~~~~~~-----------~~~~---~~~~~~~-~-~~~~------~~~~~~~~~~~~~~l~~aG-f 213 (292)
T 2aot_A 157 FFHSLLGTNAKMLIIVVSGSS-----------GWDK---LWKKYGS-R-FPQD------DLCQYITSDDLTQMLDNLG-L 213 (292)
T ss_dssp HHHHTEEEEEEEEEEEECTTS-----------HHHH---HHHHHGG-G-SCCC------TTCCCCCHHHHHHHHHHHT-C
T ss_pred HHHHHcCCCcEEEEEEecCCc-----------cHHH---HHHHHHH-h-ccCC------CcccCCCHHHHHHHHHHCC-C
Confidence 777899999999998754321 1221 1222111 1 0000 1235688999999999987 9
Q ss_pred EEEEEE
Q 017439 293 SIEIMN 298 (371)
Q Consensus 293 ~I~~~e 298 (371)
++....
T Consensus 214 ~~~~~~ 219 (292)
T 2aot_A 214 KYECYD 219 (292)
T ss_dssp CEEEEE
T ss_pred ceEEEE
Confidence 877643
|
| >3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei} | Back alignment and structure |
|---|
Probab=98.87 E-value=4.5e-08 Score=88.06 Aligned_cols=168 Identities=15% Similarity=0.098 Sum_probs=98.5
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCC--------cc
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLS--------KK 134 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~--------~~ 134 (371)
...+|+|+|||+|..+..+... ..+++..|+...-....-+.+... +-
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~------------------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~ 85 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASK------------------------GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKA 85 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT------------------------TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEE
T ss_pred CCCeEEEECCCCCHHHHHHHhC------------------------CCeEEEEECCHHHHHHHHHHHHhcCCccccCcce
Confidence 4579999999999998877621 014555555433322222222110 11
Q ss_pred eeeeccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHH
Q 017439 135 YFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNAR 214 (371)
Q Consensus 135 ~f~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~R 214 (371)
-|..+. +..--+|++++|+++++.++|++.. | .++..+|+.-
T Consensus 86 ~~~~~d---~~~~~~~~~~~D~v~~~~~l~~~~~-~----------------------------------~~~~~~l~~~ 127 (235)
T 3sm3_A 86 EFKVEN---ASSLSFHDSSFDFAVMQAFLTSVPD-P----------------------------------KERSRIIKEV 127 (235)
T ss_dssp EEEECC---TTSCCSCTTCEEEEEEESCGGGCCC-H----------------------------------HHHHHHHHHH
T ss_pred EEEEec---ccccCCCCCceeEEEEcchhhcCCC-H----------------------------------HHHHHHHHHH
Confidence 233333 2222367899999999999999543 1 2233578888
Q ss_pred HhhcccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcc--cCcccccCCHHHHHHHhhcCCce
Q 017439 215 AQELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDS--FNVPMYYPFLGELMGHIKRNKNF 292 (371)
Q Consensus 215 a~EL~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~--fn~P~Y~ps~eE~~~~i~~~g~F 292 (371)
.+-|+|||++++..++.....+ .........+.....+|......... .....++++.+|+++++++.| |
T Consensus 128 ~~~L~pgG~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aG-f 199 (235)
T 3sm3_A 128 FRVLKPGAYLYLVEFGQNWHLK-------LYRKRYLHDFPITKEEGSFLARDPETGETEFIAHHFTEKELVFLLTDCR-F 199 (235)
T ss_dssp HHHEEEEEEEEEEEEBCCTTSH-------HHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECBCHHHHHHHHHTTT-E
T ss_pred HHHcCCCeEEEEEECCcchhHH-------HHHHHhhhhccchhhhcceEecccccCCcceeeEeCCHHHHHHHHHHcC-C
Confidence 8999999999999887643311 11122222222222222211110011 123356789999999999987 9
Q ss_pred EEEEEEEe
Q 017439 293 SIEIMNTF 300 (371)
Q Consensus 293 ~I~~~e~~ 300 (371)
+++.++..
T Consensus 200 ~~~~~~~~ 207 (235)
T 3sm3_A 200 EIDYFRVK 207 (235)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEec
Confidence 99988875
|
| >4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans} | Back alignment and structure |
|---|
Probab=98.86 E-value=1.5e-08 Score=95.31 Aligned_cols=101 Identities=17% Similarity=0.242 Sum_probs=65.9
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCC-cceeeeccCC
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLS-KKYFATGVPG 142 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~-~~~f~~gvpg 142 (371)
.-+|+|+|||+|..|..+. + +. -+|+..|+-..- .+..... +-.|..+.
T Consensus 40 ~~~vLDvGcGtG~~~~~l~--------~-~~---------------~~v~gvD~s~~m----l~~a~~~~~v~~~~~~-- 89 (257)
T 4hg2_A 40 RGDALDCGCGSGQASLGLA--------E-FF---------------ERVHAVDPGEAQ----IRQALRHPRVTYAVAP-- 89 (257)
T ss_dssp SSEEEEESCTTTTTHHHHH--------T-TC---------------SEEEEEESCHHH----HHTCCCCTTEEEEECC--
T ss_pred CCCEEEEcCCCCHHHHHHH--------H-hC---------------CEEEEEeCcHHh----hhhhhhcCCceeehhh--
Confidence 3589999999999988776 3 11 146666654322 1111111 22344443
Q ss_pred CcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCc
Q 017439 143 SFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGG 222 (371)
Q Consensus 143 SFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 222 (371)
+-.--+|++|+|+|+|+.++||+. |+ .||+.-++-|||||
T Consensus 90 -~e~~~~~~~sfD~v~~~~~~h~~~--~~-------------------------------------~~~~e~~rvLkpgG 129 (257)
T 4hg2_A 90 -AEDTGLPPASVDVAIAAQAMHWFD--LD-------------------------------------RFWAELRRVARPGA 129 (257)
T ss_dssp -TTCCCCCSSCEEEEEECSCCTTCC--HH-------------------------------------HHHHHHHHHEEEEE
T ss_pred -hhhhcccCCcccEEEEeeehhHhh--HH-------------------------------------HHHHHHHHHcCCCC
Confidence 333336999999999999999953 11 25666677899999
Q ss_pred eEEEEecCcCCC
Q 017439 223 LLLLLTPTIRDG 234 (371)
Q Consensus 223 ~lvl~~~gr~~~ 234 (371)
+|++...+....
T Consensus 130 ~l~~~~~~~~~~ 141 (257)
T 4hg2_A 130 VFAAVTYGLTRV 141 (257)
T ss_dssp EEEEEEECCCBC
T ss_pred EEEEEECCCCCC
Confidence 999988776543
|
| >3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A* | Back alignment and structure |
|---|
Probab=98.85 E-value=4.3e-08 Score=87.30 Aligned_cols=158 Identities=15% Similarity=0.081 Sum_probs=91.0
Q ss_pred eEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCCCc
Q 017439 65 FKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPGSF 144 (371)
Q Consensus 65 ~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpgSF 144 (371)
.+|+|+|||+|..+..+... . .+++..|+...--... +.....+--|..+. +
T Consensus 48 ~~vLdiG~G~G~~~~~l~~~------~------------------~~v~~~D~s~~~~~~a-~~~~~~~~~~~~~d---~ 99 (218)
T 3ou2_A 48 GDVLELASGTGYWTRHLSGL------A------------------DRVTALDGSAEMIAEA-GRHGLDNVEFRQQD---L 99 (218)
T ss_dssp SEEEEESCTTSHHHHHHHHH------S------------------SEEEEEESCHHHHHHH-GGGCCTTEEEEECC---T
T ss_pred CeEEEECCCCCHHHHHHHhc------C------------------CeEEEEeCCHHHHHHH-HhcCCCCeEEEecc---c
Confidence 49999999999988877621 0 1455555543321111 11111122344444 2
Q ss_pred ccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceE
Q 017439 145 HGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLL 224 (371)
Q Consensus 145 y~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~l 224 (371)
..++|++++|+++++.++||+ |. .++..+|+.-.+-|+|||++
T Consensus 100 -~~~~~~~~~D~v~~~~~l~~~---~~---------------------------------~~~~~~l~~~~~~L~pgG~l 142 (218)
T 3ou2_A 100 -FDWTPDRQWDAVFFAHWLAHV---PD---------------------------------DRFEAFWESVRSAVAPGGVV 142 (218)
T ss_dssp -TSCCCSSCEEEEEEESCGGGS---CH---------------------------------HHHHHHHHHHHHHEEEEEEE
T ss_pred -ccCCCCCceeEEEEechhhcC---CH---------------------------------HHHHHHHHHHHHHcCCCeEE
Confidence 334899999999999999995 32 22445788888999999999
Q ss_pred EEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEe
Q 017439 225 LLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTF 300 (371)
Q Consensus 225 vl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~ 300 (371)
++...++..... ...+......... ..+. .-..+.....+++.+|+++++++.| |+++..+..
T Consensus 143 ~~~~~~~~~~~~---------~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~l~~aG-f~v~~~~~~ 205 (218)
T 3ou2_A 143 EFVDVTDHERRL---------EQQDDSEPEVAVR-RTLQ--DGRSFRIVKVFRSPAELTERLTALG-WSCSVDEVH 205 (218)
T ss_dssp EEEEECCCC---------------------CEEE-EECT--TSCEEEEECCCCCHHHHHHHHHHTT-EEEEEEEEE
T ss_pred EEEeCCCCcccc---------chhhhccccccee-eecC--CcchhhHhhcCCCHHHHHHHHHHCC-CEEEeeecc
Confidence 999987743210 0000000000000 0000 0000111233679999999999987 998877765
|
| >4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.85 E-value=3.9e-08 Score=92.21 Aligned_cols=163 Identities=14% Similarity=0.148 Sum_probs=95.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC----Ccceeee
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL----SKKYFAT 138 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~----~~~~f~~ 138 (371)
+..+|+|+|||+|..+..+... ..+|+..|+-..-....=+.+.. .+--|..
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~------------------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~ 123 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAER------------------------GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIH 123 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT------------------------TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEE
T ss_pred CCCEEEEeCCcchHHHHHHHHC------------------------CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEE
Confidence 3679999999999988877621 01455555543322222111111 1112333
Q ss_pred ccCCCccccc-CCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 139 GVPGSFHGRL-FPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 139 gvpgSFy~rL-fP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
+. +..-. ++++++|+|+++.++||+... ..+|+.-++-
T Consensus 124 ~d---~~~~~~~~~~~fD~v~~~~~l~~~~~~--------------------------------------~~~l~~~~~~ 162 (285)
T 4htf_A 124 CA---AQDVASHLETPVDLILFHAVLEWVADP--------------------------------------RSVLQTLWSV 162 (285)
T ss_dssp SC---GGGTGGGCSSCEEEEEEESCGGGCSCH--------------------------------------HHHHHHHHHT
T ss_pred cC---HHHhhhhcCCCceEEEECchhhcccCH--------------------------------------HHHHHHHHHH
Confidence 33 22222 578999999999999996321 2367788899
Q ss_pred cccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEE
Q 017439 218 LVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIM 297 (371)
Q Consensus 218 L~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~ 297 (371)
|+|||++++......... ....+...|.. ...+..... .....|.++.+.+|+++++++.| |+++..
T Consensus 163 LkpgG~l~~~~~~~~~~~---------~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~aG-f~v~~~ 229 (285)
T 4htf_A 163 LRPGGVLSLMFYNAHGLL---------MHNMVAGNFDY-VQAGMPKKK--KRTLSPDYPRDPTQVYLWLEEAG-WQIMGK 229 (285)
T ss_dssp EEEEEEEEEEEEBHHHHH---------HHHHHTTCHHH-HHTTCCCC------CCCSCCBCHHHHHHHHHHTT-CEEEEE
T ss_pred cCCCeEEEEEEeCCchHH---------HHHHHhcCHHH-Hhhhccccc--cccCCCCCCCCHHHHHHHHHHCC-Cceeee
Confidence 999999999987654210 00111111211 122222111 11223567789999999999987 999998
Q ss_pred EEeecC
Q 017439 298 NTFTHP 303 (371)
Q Consensus 298 e~~~~p 303 (371)
+.+..+
T Consensus 230 ~~~~~~ 235 (285)
T 4htf_A 230 TGVRVF 235 (285)
T ss_dssp EEESSS
T ss_pred eeEEEe
Confidence 887433
|
| >2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A | Back alignment and structure |
|---|
Probab=98.82 E-value=2.8e-08 Score=89.95 Aligned_cols=152 Identities=13% Similarity=0.075 Sum_probs=92.6
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCCC
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPGS 143 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpgS 143 (371)
..+|+|+|||+|..+..+. + + -+ +|+..|+...--...=+..+. +--|..+.
T Consensus 43 ~~~vLDiGcG~G~~~~~l~--------~-~----------~~-----~v~gvD~s~~~~~~a~~~~~~-~v~~~~~d--- 94 (250)
T 2p7i_A 43 PGNLLELGSFKGDFTSRLQ--------E-H----------FN-----DITCVEASEEAISHAQGRLKD-GITYIHSR--- 94 (250)
T ss_dssp SSCEEEESCTTSHHHHHHT--------T-T----------CS-----CEEEEESCHHHHHHHHHHSCS-CEEEEESC---
T ss_pred CCcEEEECCCCCHHHHHHH--------H-h----------CC-----cEEEEeCCHHHHHHHHHhhhC-CeEEEEcc---
Confidence 3579999999999887665 2 1 11 356666654432222222222 22344444
Q ss_pred cccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHH-hhcccCc
Q 017439 144 FHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARA-QELVPGG 222 (371)
Q Consensus 144 Fy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra-~EL~pGG 222 (371)
...++|++++|+++++.+||++... ..+|+.-+ +-|+|||
T Consensus 95 -~~~~~~~~~fD~v~~~~~l~~~~~~--------------------------------------~~~l~~~~~~~LkpgG 135 (250)
T 2p7i_A 95 -FEDAQLPRRYDNIVLTHVLEHIDDP--------------------------------------VALLKRINDDWLAEGG 135 (250)
T ss_dssp -GGGCCCSSCEEEEEEESCGGGCSSH--------------------------------------HHHHHHHHHTTEEEEE
T ss_pred -HHHcCcCCcccEEEEhhHHHhhcCH--------------------------------------HHHHHHHHHHhcCCCC
Confidence 3344789999999999999996431 23677777 8999999
Q ss_pred eEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhh----hcccCcccccCCHHHHHHHhhcCCceEEEEEE
Q 017439 223 LLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEK----VDSFNVPMYYPFLGELMGHIKRNKNFSIEIMN 298 (371)
Q Consensus 223 ~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~----~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e 298 (371)
++++..+..... ..... . ..|...... .+...-.....+.+++++++++.| |++++.+
T Consensus 136 ~l~i~~~~~~~~-----------~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G-f~~~~~~ 197 (250)
T 2p7i_A 136 RLFLVCPNANAV-----------SRQIA-V-----KMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAG-LQVTYRS 197 (250)
T ss_dssp EEEEEEECTTCH-----------HHHHH-H-----HTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTT-CEEEEEE
T ss_pred EEEEEcCChHHH-----------HHHHH-H-----HcCccccchhcccccccccccccCCHHHHHHHHHHCC-CeEEEEe
Confidence 999988654321 11111 1 123222110 000111223579999999999987 9998887
Q ss_pred Ee
Q 017439 299 TF 300 (371)
Q Consensus 299 ~~ 300 (371)
.+
T Consensus 198 ~~ 199 (250)
T 2p7i_A 198 GI 199 (250)
T ss_dssp EE
T ss_pred ee
Confidence 65
|
| >4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A* | Back alignment and structure |
|---|
Probab=98.80 E-value=7.7e-08 Score=90.47 Aligned_cols=161 Identities=16% Similarity=0.182 Sum_probs=92.3
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhh---hhcCCCCcc-eeeec
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTL---FKSVPLSKK-YFATG 139 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~l---F~~l~~~~~-~f~~g 139 (371)
.-+|+|+|||+|..|+.+. + ++. .| ..+|+.-|+-..--... +.......+ -|..|
T Consensus 71 ~~~vLDlGcGtG~~~~~la--------~-~~~--------~~---~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~ 130 (261)
T 4gek_A 71 GTQVYDLGCSLGAATLSVR--------R-NIH--------HD---NCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEG 130 (261)
T ss_dssp TCEEEEETCTTTHHHHHHH--------H-TCC--------SS---SCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEES
T ss_pred CCEEEEEeCCCCHHHHHHH--------H-hcC--------CC---CCEEEEEECCHHHHHHHHHHHHhhccCceEEEeec
Confidence 4699999999999998776 3 221 22 34677777654322111 111111112 24444
Q ss_pred cCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcc
Q 017439 140 VPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELV 219 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 219 (371)
. ... +|.++.|+++|+++|||+ |. .|...+|+.-++-|+
T Consensus 131 D----~~~-~~~~~~d~v~~~~~l~~~---~~---------------------------------~~~~~~l~~i~~~Lk 169 (261)
T 4gek_A 131 D----IRD-IAIENASMVVLNFTLQFL---EP---------------------------------SERQALLDKIYQGLN 169 (261)
T ss_dssp C----TTT-CCCCSEEEEEEESCGGGS---CH---------------------------------HHHHHHHHHHHHHEE
T ss_pred c----ccc-ccccccccceeeeeeeec---Cc---------------------------------hhHhHHHHHHHHHcC
Confidence 3 122 355679999999999995 42 234457888889999
Q ss_pred cCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHH-cCCCchhhhc----ccCcccccCCHHHHHHHhhcCCceEE
Q 017439 220 PGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLAN-MGLIAEEKVD----SFNVPMYYPFLGELMGHIKRNKNFSI 294 (371)
Q Consensus 220 pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~-eGli~~e~~d----~fn~P~Y~ps~eE~~~~i~~~g~F~I 294 (371)
|||+|++.-...... ....+.+...+.+... .|+ ++.++. ...-.....|.+|+++.+++.| |+-
T Consensus 170 pGG~lii~e~~~~~~--------~~~~~~~~~~~~~~~~~~g~-s~~ei~~~~~~l~~~~~~~s~~~~~~~L~~AG-F~~ 239 (261)
T 4gek_A 170 PGGALVLSEKFSFED--------AKVGELLFNMHHDFKRANGY-SELEISQKRSMLENVMLTDSVETHKARLHKAG-FEH 239 (261)
T ss_dssp EEEEEEEEEEBCCSS--------HHHHHHHHHHHHHHHHHTTG-GGSTTHHHHHHHHHHCCCBCHHHHHHHHHHHT-CSE
T ss_pred CCcEEEEEeccCCCC--------HHHHHHHHHHHHHHHHHcCC-CHHHHHHHHhhhcccccCCCHHHHHHHHHHcC-CCe
Confidence 999999875443321 1122333344443332 233 222211 1111223458999999999987 864
Q ss_pred E
Q 017439 295 E 295 (371)
Q Consensus 295 ~ 295 (371)
.
T Consensus 240 v 240 (261)
T 4gek_A 240 S 240 (261)
T ss_dssp E
T ss_pred E
Confidence 3
|
| >3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str} | Back alignment and structure |
|---|
Probab=98.77 E-value=3.7e-08 Score=90.46 Aligned_cols=168 Identities=13% Similarity=0.098 Sum_probs=95.8
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccC
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVP 141 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvp 141 (371)
....+|+|+|||+|..+..+. + + .+ . +++..|+...--...=+.+...+--|..+.
T Consensus 43 ~~~~~vLD~GcG~G~~~~~l~--------~-~----------~~---~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d- 98 (253)
T 3g5l_A 43 FNQKTVLDLGCGFGWHCIYAA--------E-H----------GA---K-KVLGIDLSERMLTEAKRKTTSPVVCYEQKA- 98 (253)
T ss_dssp CTTCEEEEETCTTCHHHHHHH--------H-T----------TC---S-EEEEEESCHHHHHHHHHHCCCTTEEEEECC-
T ss_pred cCCCEEEEECCCCCHHHHHHH--------H-c----------CC---C-EEEEEECCHHHHHHHHHhhccCCeEEEEcc-
Confidence 356899999999998887766 2 1 11 2 567777654332222222221222344433
Q ss_pred CCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccC
Q 017439 142 GSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPG 221 (371)
Q Consensus 142 gSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 221 (371)
+..--+|++++|+|+++.++||+.. ...+|+.-++-|+||
T Consensus 99 --~~~~~~~~~~fD~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~Lkpg 138 (253)
T 3g5l_A 99 --IEDIAIEPDAYNVVLSSLALHYIAS--------------------------------------FDDICKKVYINLKSS 138 (253)
T ss_dssp --GGGCCCCTTCEEEEEEESCGGGCSC--------------------------------------HHHHHHHHHHHEEEE
T ss_pred --hhhCCCCCCCeEEEEEchhhhhhhh--------------------------------------HHHHHHHHHHHcCCC
Confidence 2222357899999999999999632 223677788899999
Q ss_pred ceEEEEecCcCCCCCC------CCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEE
Q 017439 222 GLLLLLTPTIRDGIPM------FSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIE 295 (371)
Q Consensus 222 G~lvl~~~gr~~~~~~------~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~ 295 (371)
|++++........... ...+....+ .+.....++.... .+..-....|.+|.+|+++++++.| |+++
T Consensus 139 G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~-~~~~~~~~~~~~t~~~~~~~l~~aG-F~~~ 211 (253)
T 3g5l_A 139 GSFIFSVEHPVFTADGRQDWYTDETGNKLHW-----PVDRYFNESMRTS-HFLGEDVQKYHRTVTTYIQTLLKNG-FQIN 211 (253)
T ss_dssp EEEEEEEECHHHHSSSSCSCEECSSCCEEEE-----EECCTTCCCEEEE-EETTEEEEEECCCHHHHHHHHHHTT-EEEE
T ss_pred cEEEEEeCCCccccCccccceeccCCceEEE-----EeccccccceEEE-eeccccCccEecCHHHHHHHHHHcC-Ceee
Confidence 9999986532110000 000000000 0000011111100 0111135567789999999999988 9998
Q ss_pred EEEEe
Q 017439 296 IMNTF 300 (371)
Q Consensus 296 ~~e~~ 300 (371)
.++..
T Consensus 212 ~~~e~ 216 (253)
T 3g5l_A 212 SVIEP 216 (253)
T ss_dssp EEECC
T ss_pred eeecC
Confidence 88755
|
| >1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A* | Back alignment and structure |
|---|
Probab=98.76 E-value=2.3e-07 Score=86.65 Aligned_cols=163 Identities=16% Similarity=0.161 Sum_probs=93.0
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCC----cceeee
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLS----KKYFAT 138 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~----~~~f~~ 138 (371)
...+|+|+|||+|..+..+... . ..+++..|+...--...-+.++.. +--|..
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~----------~-------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~ 120 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLLKYERA----------G-------------IGEYYGVDIAEVSINDARVRARNMKRRFKVFFRA 120 (298)
T ss_dssp TTCEEEEETCTTTTTHHHHHHH----------T-------------CSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHHC----------C-------------CCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEE
Confidence 3579999999999998875521 0 114555555433322221111111 112333
Q ss_pred ccCCCcccccC-CCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 139 GVPGSFHGRLF-PESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 139 gvpgSFy~rLf-P~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
+. +..--+ |++++|+|+++.++||+-.. ..|...+|+.-++-
T Consensus 121 ~d---~~~~~~~~~~~fD~v~~~~~l~~~~~~----------------------------------~~~~~~~l~~~~~~ 163 (298)
T 1ri5_A 121 QD---SYGRHMDLGKEFDVISSQFSFHYAFST----------------------------------SESLDIAQRNIARH 163 (298)
T ss_dssp SC---TTTSCCCCSSCEEEEEEESCGGGGGSS----------------------------------HHHHHHHHHHHHHT
T ss_pred CC---ccccccCCCCCcCEEEECchhhhhcCC----------------------------------HHHHHHHHHHHHHh
Confidence 32 222223 68899999999999995211 13556688888899
Q ss_pred cccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHH-HcC----------CCch---hhh-----cc-cCcccccC
Q 017439 218 LVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLA-NMG----------LIAE---EKV-----DS-FNVPMYYP 277 (371)
Q Consensus 218 L~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv-~eG----------li~~---e~~-----d~-fn~P~Y~p 277 (371)
|+|||++++..+.... +...+.... ... .+.. .++ +. -..|.++.
T Consensus 164 LkpgG~l~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~ 228 (298)
T 1ri5_A 164 LRPGGYFIMTVPSRDV---------------ILERYKQGRMSNDFYKIELEKMEDVPMESVREYRFTLLDSVNNCIEYFV 228 (298)
T ss_dssp EEEEEEEEEEEECHHH---------------HHHHHHHTCCBCSSEEEECCCCSSCCTTTCCEEEEEETTSCSSEEEECC
T ss_pred cCCCCEEEEEECCHHH---------------HHHHHccCccCCeeEEEEeCccccccccccceEEEEEchhhcCCccccc
Confidence 9999999999865421 000011000 000 0000 000 00 02345778
Q ss_pred CHHHHHHHhhcCCceEEEEEEEee
Q 017439 278 FLGELMGHIKRNKNFSIEIMNTFT 301 (371)
Q Consensus 278 s~eE~~~~i~~~g~F~I~~~e~~~ 301 (371)
+++|+++++++.| |+++..+.+.
T Consensus 229 ~~~~l~~ll~~aG-f~~v~~~~~~ 251 (298)
T 1ri5_A 229 DFTRMVDGFKRLG-LSLVERKGFI 251 (298)
T ss_dssp CHHHHHHHHHTTT-EEEEEEEEHH
T ss_pred CHHHHHHHHHHcC-CEEEEecCHH
Confidence 9999999999987 9998887663
|
| >3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=98.75 E-value=4.1e-08 Score=87.69 Aligned_cols=140 Identities=16% Similarity=0.161 Sum_probs=92.0
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPG 142 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpg 142 (371)
...+|+|+|||+|..+..+. + + ..+++..|+-..-....-+.+ +--+..+.
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~--------~-~---------------~~~v~~vD~s~~~~~~a~~~~---~~~~~~~d-- 93 (211)
T 3e23_A 43 AGAKILELGCGAGYQAEAML--------A-A---------------GFDVDATDGSPELAAEASRRL---GRPVRTML-- 93 (211)
T ss_dssp TTCEEEESSCTTSHHHHHHH--------H-T---------------TCEEEEEESCHHHHHHHHHHH---TSCCEECC--
T ss_pred CCCcEEEECCCCCHHHHHHH--------H-c---------------CCeEEEECCCHHHHHHHHHhc---CCceEEee--
Confidence 35699999999999888776 2 1 124666666443322221111 11222332
Q ss_pred CcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCc
Q 017439 143 SFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGG 222 (371)
Q Consensus 143 SFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 222 (371)
...+-+++++|+++++.++|++. . +|+..+|+.-++-|+|||
T Consensus 94 --~~~~~~~~~fD~v~~~~~l~~~~---~---------------------------------~~~~~~l~~~~~~LkpgG 135 (211)
T 3e23_A 94 --FHQLDAIDAYDAVWAHACLLHVP---R---------------------------------DELADVLKLIWRALKPGG 135 (211)
T ss_dssp --GGGCCCCSCEEEEEECSCGGGSC---H---------------------------------HHHHHHHHHHHHHEEEEE
T ss_pred --eccCCCCCcEEEEEecCchhhcC---H---------------------------------HHHHHHHHHHHHhcCCCc
Confidence 23344899999999999999953 1 355668888889999999
Q ss_pred eEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEe
Q 017439 223 LLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTF 300 (371)
Q Consensus 223 ~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~ 300 (371)
++++.+........ +.+...+.+.+.+++++++++.|.|+++.++..
T Consensus 136 ~l~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~~~ 182 (211)
T 3e23_A 136 LFYASYKSGEGEGR-------------------------------DKLARYYNYPSEEWLRARYAEAGTWASVAVESS 182 (211)
T ss_dssp EEEEEEECCSSCEE-------------------------------CTTSCEECCCCHHHHHHHHHHHCCCSEEEEEEE
T ss_pred EEEEEEcCCCcccc-------------------------------cccchhccCCCHHHHHHHHHhCCCcEEEEEEec
Confidence 99999754432110 112223457899999999998654998888765
|
| >3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.75 E-value=5e-08 Score=89.12 Aligned_cols=142 Identities=11% Similarity=0.058 Sum_probs=90.1
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPG 142 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpg 142 (371)
...+|+|+|||+|..+..+. + + + .+|+..|+-..-....-+. --+.. +
T Consensus 41 ~~~~vLDiGcG~G~~~~~l~--------~-~----~-----------~~v~gvD~s~~~~~~a~~~-----~~~~~---~ 88 (240)
T 3dli_A 41 GCRRVLDIGCGRGEFLELCK--------E-E----G-----------IESIGVDINEDMIKFCEGK-----FNVVK---S 88 (240)
T ss_dssp TCSCEEEETCTTTHHHHHHH--------H-H----T-----------CCEEEECSCHHHHHHHHTT-----SEEEC---S
T ss_pred CCCeEEEEeCCCCHHHHHHH--------h-C----C-----------CcEEEEECCHHHHHHHHhh-----cceee---c
Confidence 45799999999999887555 2 1 0 1355666543322211111 11222 2
Q ss_pred Ccccc--cCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc
Q 017439 143 SFHGR--LFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP 220 (371)
Q Consensus 143 SFy~r--LfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 220 (371)
....- -+|++++|+|+|+.++||+. . .|+..+|+.-.+-|+|
T Consensus 89 d~~~~~~~~~~~~fD~i~~~~~l~~~~---~---------------------------------~~~~~~l~~~~~~Lkp 132 (240)
T 3dli_A 89 DAIEYLKSLPDKYLDGVMISHFVEHLD---P---------------------------------ERLFELLSLCYSKMKY 132 (240)
T ss_dssp CHHHHHHTSCTTCBSEEEEESCGGGSC---G---------------------------------GGHHHHHHHHHHHBCT
T ss_pred cHHHHhhhcCCCCeeEEEECCchhhCC---c---------------------------------HHHHHHHHHHHHHcCC
Confidence 22221 36889999999999999953 1 3455688888899999
Q ss_pred CceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEe
Q 017439 221 GGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTF 300 (371)
Q Consensus 221 GG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~ 300 (371)
||++++..++... ... +...+ +. .-..+.++.+++++++++.| |++...+.+
T Consensus 133 gG~l~~~~~~~~~-----------~~~-~~~~~--------~~-------~~~~~~~~~~~l~~~l~~aG-f~~~~~~~~ 184 (240)
T 3dli_A 133 SSYIVIESPNPTS-----------LYS-LINFY--------ID-------PTHKKPVHPETLKFILEYLG-FRDVKIEFF 184 (240)
T ss_dssp TCCEEEEEECTTS-----------HHH-HHHHT--------TS-------TTCCSCCCHHHHHHHHHHHT-CEEEEEEEE
T ss_pred CcEEEEEeCCcch-----------hHH-HHHHh--------cC-------ccccccCCHHHHHHHHHHCC-CeEEEEEEe
Confidence 9999998876321 111 11111 11 11245678899999999987 999888877
|
| >3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=98.75 E-value=3.4e-08 Score=87.68 Aligned_cols=155 Identities=10% Similarity=0.026 Sum_probs=87.9
Q ss_pred eEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CCC-cceeeecc
Q 017439 65 FKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PLS-KKYFATGV 140 (371)
Q Consensus 65 ~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~~-~~~f~~gv 140 (371)
-+|+|+|||+|..+..+. + + | ..+++..|+-..-....=+.+ ... +--|..+.
T Consensus 45 ~~vLdiG~G~G~~~~~l~--------~-~-----------~---~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d 101 (219)
T 3dlc_A 45 GTCIDIGSGPGALSIALA--------K-Q-----------S---DFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGD 101 (219)
T ss_dssp EEEEEETCTTSHHHHHHH--------H-H-----------S---EEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECB
T ss_pred CEEEEECCCCCHHHHHHH--------H-c-----------C---CCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcC
Confidence 399999999999888776 2 1 1 335666666433222111111 111 12233332
Q ss_pred CCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc
Q 017439 141 PGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP 220 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 220 (371)
+..--+|++++|+++++.++||+.. ...+|+.-.+-|+|
T Consensus 102 ---~~~~~~~~~~~D~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~L~p 140 (219)
T 3dlc_A 102 ---VHNIPIEDNYADLIVSRGSVFFWED--------------------------------------VATAFREIYRILKS 140 (219)
T ss_dssp ---TTBCSSCTTCEEEEEEESCGGGCSC--------------------------------------HHHHHHHHHHHEEE
T ss_pred ---HHHCCCCcccccEEEECchHhhccC--------------------------------------HHHHHHHHHHhCCC
Confidence 2232368899999999999999622 12367777889999
Q ss_pred CceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEe
Q 017439 221 GGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTF 300 (371)
Q Consensus 221 GG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~ 300 (371)
||++++...-... ...+.+...+... ..--. ..+.......+.+|+++++++.| |++..+...
T Consensus 141 gG~l~~~~~~~~~----------~~~~~~~~~~~~~---~~~~~---~~~~~~~~~~~~~~~~~~l~~aG-f~~v~~~~~ 203 (219)
T 3dlc_A 141 GGKTYIGGGFGNK----------ELRDSISAEMIRK---NPDWK---EFNRKNISQENVERFQNVLDEIG-ISSYEIILG 203 (219)
T ss_dssp EEEEEEEECCSSH----------HHHHHHHHHHHHH---CTTHH---HHHHHHSSHHHHHHHHHHHHHHT-CSSEEEEEE
T ss_pred CCEEEEEeccCcH----------HHHHHHHHHHHHh---HHHHH---hhhhhccccCCHHHHHHHHHHcC-CCeEEEEec
Confidence 9999987532221 1222333332221 10000 00111122348899999999987 887665543
|
| >1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36 | Back alignment and structure |
|---|
Probab=98.75 E-value=1.9e-07 Score=83.81 Aligned_cols=78 Identities=12% Similarity=0.034 Sum_probs=55.3
Q ss_pred CceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEecCc
Q 017439 152 SSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTPTI 231 (371)
Q Consensus 152 ~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~gr 231 (371)
+++|+|++..++|++ |. .|...+|+.-++-|+|||++++.....
T Consensus 100 ~~fD~v~~~~~l~~l---~~---------------------------------~~~~~~l~~~~r~LkpgG~~~l~~~~~ 143 (203)
T 1pjz_A 100 GHCAAFYDRAAMIAL---PA---------------------------------DMRERYVQHLEALMPQACSGLLITLEY 143 (203)
T ss_dssp HSEEEEEEESCGGGS---CH---------------------------------HHHHHHHHHHHHHSCSEEEEEEEEESS
T ss_pred CCEEEEEECcchhhC---CH---------------------------------HHHHHHHHHHHHHcCCCcEEEEEEEec
Confidence 789999999999995 32 233457888889999999966555322
Q ss_pred CCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEee
Q 017439 232 RDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFT 301 (371)
Q Consensus 232 ~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~~ 301 (371)
+.. ...-|.|..+.+|+++.+++ | |+++.++...
T Consensus 144 ~~~----------------------------------~~~~~~~~~~~~el~~~~~~-g-f~i~~~~~~~ 177 (203)
T 1pjz_A 144 DQA----------------------------------LLEGPPFSVPQTWLHRVMSG-N-WEVTKVGGQD 177 (203)
T ss_dssp CSS----------------------------------SSSSCCCCCCHHHHHHTSCS-S-EEEEEEEESS
T ss_pred Ccc----------------------------------ccCCCCCCCCHHHHHHHhcC-C-cEEEEecccc
Confidence 110 00113345789999999997 5 9999888764
|
| >2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A* | Back alignment and structure |
|---|
Probab=98.75 E-value=4.1e-07 Score=86.61 Aligned_cols=160 Identities=11% Similarity=0.149 Sum_probs=89.7
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CC-Ccceeee
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PL-SKKYFAT 138 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~-~~~~f~~ 138 (371)
...+|+|+|||+|..+..+... +. .+|+..|+-..--...=+.+ .. .+--|..
T Consensus 90 ~~~~vLDiGcG~G~~~~~la~~---------~~--------------~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~ 146 (318)
T 2fk8_A 90 PGMTLLDIGCGWGTTMRRAVER---------FD--------------VNVIGLTLSKNQHARCEQVLASIDTNRSRQVLL 146 (318)
T ss_dssp TTCEEEEESCTTSHHHHHHHHH---------HC--------------CEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEE
T ss_pred CcCEEEEEcccchHHHHHHHHH---------CC--------------CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEE
Confidence 4569999999999988877632 10 13444444332211111111 10 1112333
Q ss_pred ccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 139 GVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 139 gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
+. +..+ | +++|+++|+.++|++.. .|...+|+.-.+-|
T Consensus 147 ~d----~~~~-~-~~fD~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~L 184 (318)
T 2fk8_A 147 QG----WEDF-A-EPVDRIVSIEAFEHFGH------------------------------------ENYDDFFKRCFNIM 184 (318)
T ss_dssp SC----GGGC-C-CCCSEEEEESCGGGTCG------------------------------------GGHHHHHHHHHHHS
T ss_pred CC----hHHC-C-CCcCEEEEeChHHhcCH------------------------------------HHHHHHHHHHHHhc
Confidence 32 1222 3 78999999999999532 24455788888999
Q ss_pred ccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcc-cccCCHHHHHHHhhcCCceEEEEE
Q 017439 219 VPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVP-MYYPFLGELMGHIKRNKNFSIEIM 297 (371)
Q Consensus 219 ~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P-~Y~ps~eE~~~~i~~~g~F~I~~~ 297 (371)
+|||++++..+...+...... .+.....-...+.+...+ ...| .+.|+.+|+.+.+++.| |+++..
T Consensus 185 kpgG~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~----------~~~~~~~~~s~~~~~~~l~~aG-f~~~~~ 251 (318)
T 2fk8_A 185 PADGRMTVQSSVSYHPYEMAA--RGKKLSFETARFIKFIVT----------EIFPGGRLPSTEMMVEHGEKAG-FTVPEP 251 (318)
T ss_dssp CTTCEEEEEEEECCCHHHHHT--TCHHHHHHHHHHHHHHHH----------HTSTTCCCCCHHHHHHHHHHTT-CBCCCC
T ss_pred CCCcEEEEEEeccCCchhhhh--ccccccccccchhhHHHH----------hcCCCCcCCCHHHHHHHHHhCC-CEEEEE
Confidence 999999999877654210000 000000000111111111 1123 35679999999999977 998877
Q ss_pred EEe
Q 017439 298 NTF 300 (371)
Q Consensus 298 e~~ 300 (371)
+.+
T Consensus 252 ~~~ 254 (318)
T 2fk8_A 252 LSL 254 (318)
T ss_dssp EEC
T ss_pred Eec
Confidence 765
|
| >3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440} | Back alignment and structure |
|---|
Probab=98.74 E-value=6.5e-08 Score=86.38 Aligned_cols=157 Identities=15% Similarity=0.128 Sum_probs=90.9
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPG 142 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpg 142 (371)
...+|+|+|||+|..+..+. + + ..+++..|+...--... +.. ....+..+.-.
T Consensus 52 ~~~~vLdiG~G~G~~~~~l~--------~-~---------------~~~v~~vD~s~~~~~~a-~~~--~~~~~~~~~~~ 104 (227)
T 3e8s_A 52 QPERVLDLGCGEGWLLRALA--------D-R---------------GIEAVGVDGDRTLVDAA-RAA--GAGEVHLASYA 104 (227)
T ss_dssp CCSEEEEETCTTCHHHHHHH--------T-T---------------TCEEEEEESCHHHHHHH-HHT--CSSCEEECCHH
T ss_pred CCCEEEEeCCCCCHHHHHHH--------H-C---------------CCEEEEEcCCHHHHHHH-HHh--cccccchhhHH
Confidence 34899999999999887666 2 1 12466666644322111 111 11223333211
Q ss_pred Cccccc-CCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccC
Q 017439 143 SFHGRL-FPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPG 221 (371)
Q Consensus 143 SFy~rL-fP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 221 (371)
.+-... .+.+++|+++++.++|+ .. | ..+|+.-++-|+||
T Consensus 105 ~~~~~~~~~~~~fD~v~~~~~l~~-~~-~-------------------------------------~~~l~~~~~~L~pg 145 (227)
T 3e8s_A 105 QLAEAKVPVGKDYDLICANFALLH-QD-I-------------------------------------IELLSAMRTLLVPG 145 (227)
T ss_dssp HHHTTCSCCCCCEEEEEEESCCCS-SC-C-------------------------------------HHHHHHHHHTEEEE
T ss_pred hhcccccccCCCccEEEECchhhh-hh-H-------------------------------------HHHHHHHHHHhCCC
Confidence 111112 45566999999999992 11 1 23677778899999
Q ss_pred ceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEe
Q 017439 222 GLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTF 300 (371)
Q Consensus 222 G~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~ 300 (371)
|++++........... ..... |....-.+... .-...+.++++.+|+++++++.| |+++.++..
T Consensus 146 G~l~~~~~~~~~~~~~-~~~~~---------~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~aG-f~~~~~~~~ 209 (227)
T 3e8s_A 146 GALVIQTLHPWSVADG-DYQDG---------WREESFAGFAG----DWQPMPWYFRTLASWLNALDMAG-LRLVSLQEP 209 (227)
T ss_dssp EEEEEEECCTTTTCTT-CCSCE---------EEEECCTTSSS----CCCCEEEEECCHHHHHHHHHHTT-EEEEEEECC
T ss_pred eEEEEEecCccccCcc-ccccc---------cchhhhhcccc----CcccceEEEecHHHHHHHHHHcC-CeEEEEecC
Confidence 9999998766432110 00000 10000001000 00246778899999999999987 999988864
|
| >1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42 | Back alignment and structure |
|---|
Probab=98.74 E-value=8.6e-08 Score=87.64 Aligned_cols=146 Identities=10% Similarity=0.031 Sum_probs=89.1
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC-Ccceeeecc
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL-SKKYFATGV 140 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~-~~~~f~~gv 140 (371)
....+|+|+|||+|..+..+.... . -+++..|.-..--...=+.+.. .+--|..+
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~-----~------------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~- 147 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKL-----Y------------------ATTDLLEPVKHMLEEAKRELAGMPVGKFILA- 147 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHH-----C------------------SEEEEEESCHHHHHHHHHHTTTSSEEEEEES-
T ss_pred cCCCEEEEECCCcCHHHHHHHHhh-----c------------------CEEEEEeCCHHHHHHHHHHhccCCceEEEEc-
Confidence 346799999999999988776321 0 0244444332221111111111 11122222
Q ss_pred CCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc
Q 017439 141 PGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP 220 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 220 (371)
.+..--+|++++|+++++.++|+++. .|+..+|+.-.+-|+|
T Consensus 148 --d~~~~~~~~~~fD~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~Lkp 189 (254)
T 1xtp_A 148 --SMETATLPPNTYDLIVIQWTAIYLTD------------------------------------ADFVKFFKHCQQALTP 189 (254)
T ss_dssp --CGGGCCCCSSCEEEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHEEE
T ss_pred --cHHHCCCCCCCeEEEEEcchhhhCCH------------------------------------HHHHHHHHHHHHhcCC
Confidence 22222357889999999999999532 2455678888899999
Q ss_pred CceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEe
Q 017439 221 GGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTF 300 (371)
Q Consensus 221 GG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~ 300 (371)
||++++.......... . .....+.+.++.+++++++++.| |++++.+..
T Consensus 190 gG~l~i~~~~~~~~~~--------~----------------------~~~~~~~~~~~~~~~~~~l~~aG-f~~~~~~~~ 238 (254)
T 1xtp_A 190 NGYIFFKENCSTGDRF--------L----------------------VDKEDSSLTRSDIHYKRLFNESG-VRVVKEAFQ 238 (254)
T ss_dssp EEEEEEEEEBC--CCE--------E----------------------EETTTTEEEBCHHHHHHHHHHHT-CCEEEEEEC
T ss_pred CeEEEEEecCCCcccc--------e----------------------ecccCCcccCCHHHHHHHHHHCC-CEEEEeeec
Confidence 9999998753321100 0 00112345679999999999987 999888765
|
| >3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei} | Back alignment and structure |
|---|
Probab=98.74 E-value=3.6e-07 Score=84.75 Aligned_cols=168 Identities=10% Similarity=0.046 Sum_probs=94.9
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcC------chhhhhhcC---CCCc
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNN------DFNTLFKSV---PLSK 133 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~N------DFn~lF~~l---~~~~ 133 (371)
...+|+|+|||+|..+..+. + ++. | ..+|+.-|+... -....=+.+ ....
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~--------~-~~g---------~---~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~ 101 (275)
T 3bkx_A 43 PGEKILEIGCGQGDLSAVLA--------D-QVG---------S---SGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGD 101 (275)
T ss_dssp TTCEEEEESCTTSHHHHHHH--------H-HHC---------T---TCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGG
T ss_pred CCCEEEEeCCCCCHHHHHHH--------H-HhC---------C---CCEEEEEECCccccccHHHHHHHHHHHHhcCCCC
Confidence 34699999999999988776 2 221 1 236777777654 112111111 1111
Q ss_pred c-eeeeccCCCcccc--cCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHH
Q 017439 134 K-YFATGVPGSFHGR--LFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESF 210 (371)
Q Consensus 134 ~-~f~~gvpgSFy~r--LfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~F 210 (371)
+ -|..+. .+... -+|++++|+++|+.++|++.... .+
T Consensus 102 ~v~~~~~d--~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~--------------------------------------~~ 141 (275)
T 3bkx_A 102 RLTVHFNT--NLSDDLGPIADQHFDRVVLAHSLWYFASAN--------------------------------------AL 141 (275)
T ss_dssp GEEEECSC--CTTTCCGGGTTCCCSEEEEESCGGGSSCHH--------------------------------------HH
T ss_pred ceEEEECC--hhhhccCCCCCCCEEEEEEccchhhCCCHH--------------------------------------HH
Confidence 2 233332 23222 24689999999999999954311 14
Q ss_pred HHHHHhhcccCceEEEEecCcCCCCCCCCCCCcchHHHHHH-HHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcC
Q 017439 211 LNARAQELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGS-CLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRN 289 (371)
Q Consensus 211 L~~Ra~EL~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~-al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~ 289 (371)
++....-++|||++++.....+...+. .....+..+.. .+... . .+........++.+++++++++.
T Consensus 142 ~~~~~~l~~~gG~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~--------~~~~~~~~~~~s~~~l~~~l~~a 209 (275)
T 3bkx_A 142 ALLFKNMAAVCDHVDVAEWSMQPTALD---QIGHLQAAMIQGLLYAI-A--------PSDVANIRTLITPDTLAQIAHDN 209 (275)
T ss_dssp HHHHHHHTTTCSEEEEEEECSSCSSGG---GHHHHHHHHHHHHHHHH-S--------CCTTCSCCCCCCHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCEEEEEEecCCCCchh---hhhHHHHHHHHHHHhhc-c--------ccccccccccCCHHHHHHHHHHC
Confidence 455555566799999988766543210 00001111111 11111 0 01122344579999999999998
Q ss_pred CceEEEEEEEeecCc
Q 017439 290 KNFSIEIMNTFTHPL 304 (371)
Q Consensus 290 g~F~I~~~e~~~~p~ 304 (371)
| |++++.+.+..+.
T Consensus 210 G-f~~~~~~~~~~~~ 223 (275)
T 3bkx_A 210 T-WTYTAGTIVEDPT 223 (275)
T ss_dssp T-CEEEECCCBCCTT
T ss_pred C-CeeEEEEEecCCC
Confidence 7 9999988774443
|
| >3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=98.73 E-value=9.3e-08 Score=86.78 Aligned_cols=147 Identities=14% Similarity=0.075 Sum_probs=91.7
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCCC
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPGS 143 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpgS 143 (371)
..+|+|+|||+|..+..+. + + ..+++..|+...-....-+.....+--|..+.
T Consensus 54 ~~~vLDiG~G~G~~~~~l~--------~-~---------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d--- 106 (242)
T 3l8d_A 54 EAEVLDVGCGDGYGTYKLS--------R-T---------------GYKAVGVDISEVMIQKGKERGEGPDLSFIKGD--- 106 (242)
T ss_dssp TCEEEEETCTTSHHHHHHH--------H-T---------------TCEEEEEESCHHHHHHHHTTTCBTTEEEEECB---
T ss_pred CCeEEEEcCCCCHHHHHHH--------H-c---------------CCeEEEEECCHHHHHHHHhhcccCCceEEEcc---
Confidence 4699999999999888776 2 1 11455666543322222111111222333333
Q ss_pred cccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCce
Q 017439 144 FHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGL 223 (371)
Q Consensus 144 Fy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~ 223 (371)
+..--+|++++|+++++.++||+... ..+|+.-++-|+|||+
T Consensus 107 ~~~~~~~~~~fD~v~~~~~l~~~~~~--------------------------------------~~~l~~~~~~L~pgG~ 148 (242)
T 3l8d_A 107 LSSLPFENEQFEAIMAINSLEWTEEP--------------------------------------LRALNEIKRVLKSDGY 148 (242)
T ss_dssp TTBCSSCTTCEEEEEEESCTTSSSCH--------------------------------------HHHHHHHHHHEEEEEE
T ss_pred hhcCCCCCCCccEEEEcChHhhccCH--------------------------------------HHHHHHHHHHhCCCeE
Confidence 22223678999999999999996321 1367777789999999
Q ss_pred EEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEe
Q 017439 224 LLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTF 300 (371)
Q Consensus 224 lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~ 300 (371)
+++...+........ . +. .......+....+++++++++++.| |+++..+.+
T Consensus 149 l~i~~~~~~~~~~~~------~-------~~-----------~~~~~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~ 200 (242)
T 3l8d_A 149 ACIAILGPTAKPREN------S-------YP-----------RLYGKDVVCNTMMPWEFEQLVKEQG-FKVVDGIGV 200 (242)
T ss_dssp EEEEEECTTCGGGGG------G-------GG-----------GGGTCCCSSCCCCHHHHHHHHHHTT-EEEEEEEEE
T ss_pred EEEEEcCCcchhhhh------h-------hh-----------hhccccccccCCCHHHHHHHHHHcC-CEEEEeecc
Confidence 999987654321100 0 10 1112233455689999999999987 999888766
|
| >2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15 | Back alignment and structure |
|---|
Probab=98.72 E-value=5.2e-08 Score=90.95 Aligned_cols=86 Identities=17% Similarity=0.039 Sum_probs=62.7
Q ss_pred CCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEecC
Q 017439 151 ESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTPT 230 (371)
Q Consensus 151 ~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~g 230 (371)
..++|+|+|+.+|||+..-+ .|+...|+.-++-|||||+|++....
T Consensus 154 ~~~fD~V~~~~~l~~i~~~~----------------------------------~~~~~~l~~i~r~LKPGG~li~~~~~ 199 (263)
T 2a14_A 154 LPLADCVLTLLAMECACCSL----------------------------------DAYRAALCNLASLLKPGGHLVTTVTL 199 (263)
T ss_dssp CCCEEEEEEESCHHHHCSSH----------------------------------HHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred cCCCCEeeehHHHHHhcCCH----------------------------------HHHHHHHHHHHHHcCCCcEEEEEEee
Confidence 56999999999999954322 35566788888999999999998643
Q ss_pred cCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEee
Q 017439 231 IRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFT 301 (371)
Q Consensus 231 r~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~~ 301 (371)
..+. +. .|- -.++.+..+.+|+++.+++.| |+++.++..+
T Consensus 200 ~~~~---------~~-------------~g~--------~~~~~~~~~~~~l~~~l~~aG-F~i~~~~~~~ 239 (263)
T 2a14_A 200 RLPS---------YM-------------VGK--------REFSCVALEKGEVEQAVLDAG-FDIEQLLHSP 239 (263)
T ss_dssp SCCE---------EE-------------ETT--------EEEECCCCCHHHHHHHHHHTT-EEEEEEEEEC
T ss_pred cCcc---------ce-------------eCC--------eEeeccccCHHHHHHHHHHCC-CEEEEEeecc
Confidence 2211 00 110 123455679999999999987 9999988764
|
| >1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21 | Back alignment and structure |
|---|
Probab=98.72 E-value=2.8e-07 Score=84.42 Aligned_cols=148 Identities=16% Similarity=0.076 Sum_probs=86.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhh---hhcCCC-Ccceeee
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTL---FKSVPL-SKKYFAT 138 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~l---F~~l~~-~~~~f~~ 138 (371)
...+|+|+|||+|..+..+. + ++ ..+++..|+-..--... ++.... .+--|..
T Consensus 36 ~~~~VLDiGcG~G~~~~~la--------~-~~--------------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~ 92 (256)
T 1nkv_A 36 PGTRILDLGSGSGEMLCTWA--------R-DH--------------GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIH 92 (256)
T ss_dssp TTCEEEEETCTTCHHHHHHH--------H-HT--------------CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHH--------H-hc--------------CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEE
Confidence 35699999999999888776 2 11 01355555543221111 111111 1122333
Q ss_pred ccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 139 GVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 139 gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
+ ++. .+.+++++|+|+|..++|++...+ .+|+.-++-|
T Consensus 93 ~---d~~-~~~~~~~fD~V~~~~~~~~~~~~~--------------------------------------~~l~~~~r~L 130 (256)
T 1nkv_A 93 N---DAA-GYVANEKCDVAACVGATWIAGGFA--------------------------------------GAEELLAQSL 130 (256)
T ss_dssp S---CCT-TCCCSSCEEEEEEESCGGGTSSSH--------------------------------------HHHHHHTTSE
T ss_pred C---ChH-hCCcCCCCCEEEECCChHhcCCHH--------------------------------------HHHHHHHHHc
Confidence 3 333 233478999999999999965322 2577777899
Q ss_pred ccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEE
Q 017439 219 VPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMN 298 (371)
Q Consensus 219 ~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e 298 (371)
+|||++++..+....... ...+...| .. .....+++.+++.+.+++.| |++..++
T Consensus 131 kpgG~l~~~~~~~~~~~~---------~~~~~~~~--------~~-------~~~~~~~~~~~~~~~l~~aG-f~~~~~~ 185 (256)
T 1nkv_A 131 KPGGIMLIGEPYWRQLPA---------TEEIAQAC--------GV-------SSTSDFLTLPGLVGAFDDLG-YDVVEMV 185 (256)
T ss_dssp EEEEEEEEEEEEETTCCS---------SHHHHHTT--------TC-------SCGGGSCCHHHHHHHHHTTT-BCCCEEE
T ss_pred CCCeEEEEecCcccCCCC---------hHHHHHHH--------hc-------ccccccCCHHHHHHHHHHCC-CeeEEEE
Confidence 999999998754432211 01111111 10 11124689999999999987 9877665
Q ss_pred Ee
Q 017439 299 TF 300 (371)
Q Consensus 299 ~~ 300 (371)
..
T Consensus 186 ~~ 187 (256)
T 1nkv_A 186 LA 187 (256)
T ss_dssp EC
T ss_pred eC
Confidence 43
|
| >3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=98.70 E-value=1.2e-07 Score=84.72 Aligned_cols=157 Identities=12% Similarity=0.086 Sum_probs=92.3
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPG 142 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpg 142 (371)
...+|+|+|||+|..+..+. + + + .+++..|....-....-+.+. -+..+.-.
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~--------~-~-----------~----~~~~~~D~~~~~~~~~~~~~~----~~~~~d~~ 83 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIK--------E-N-----------G----TRVSGIEAFPEAAEQAKEKLD----HVVLGDIE 83 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHH--------T-T-----------T----CEEEEEESSHHHHHHHHTTSS----EEEESCTT
T ss_pred CCCcEEEeCCCCCHHHHHHH--------h-c-----------C----CeEEEEeCCHHHHHHHHHhCC----cEEEcchh
Confidence 45799999999999888766 2 1 1 145666654433222211111 12222211
Q ss_pred CcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCc
Q 017439 143 SFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGG 222 (371)
Q Consensus 143 SFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 222 (371)
.+ ..-+|++++|+++++.++|++... ..+|+.-.+-|+|||
T Consensus 84 ~~-~~~~~~~~fD~v~~~~~l~~~~~~--------------------------------------~~~l~~~~~~L~~gG 124 (230)
T 3cc8_A 84 TM-DMPYEEEQFDCVIFGDVLEHLFDP--------------------------------------WAVIEKVKPYIKQNG 124 (230)
T ss_dssp TC-CCCSCTTCEEEEEEESCGGGSSCH--------------------------------------HHHHHHTGGGEEEEE
T ss_pred hc-CCCCCCCccCEEEECChhhhcCCH--------------------------------------HHHHHHHHHHcCCCC
Confidence 11 123577899999999999996431 136777778999999
Q ss_pred eEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEeec
Q 017439 223 LLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFTH 302 (371)
Q Consensus 223 ~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~~~ 302 (371)
++++..+.... +..+.. +........+.-..-.....+.+.+|+++++++.| |+++..+.+..
T Consensus 125 ~l~~~~~~~~~------------~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~~~ 187 (230)
T 3cc8_A 125 VILASIPNVSH------------ISVLAP----LLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAG-YSISKVDRVYV 187 (230)
T ss_dssp EEEEEEECTTS------------HHHHHH----HHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTT-EEEEEEEEEEC
T ss_pred EEEEEeCCcch------------HHHHHH----HhcCCceeccCCCCCcceEEEecHHHHHHHHHHcC-CeEEEEEeccc
Confidence 99998855421 111111 11111110000000012335679999999999987 99999988754
Q ss_pred C
Q 017439 303 P 303 (371)
Q Consensus 303 p 303 (371)
+
T Consensus 188 ~ 188 (230)
T 3cc8_A 188 D 188 (230)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41 | Back alignment and structure |
|---|
Probab=98.70 E-value=3.4e-07 Score=82.53 Aligned_cols=91 Identities=15% Similarity=0.131 Sum_probs=61.9
Q ss_pred CCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEe
Q 017439 149 FPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLT 228 (371)
Q Consensus 149 fP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~ 228 (371)
+|++++|+++++.++||+.. | ..+|+.-.+-|+|||++++..
T Consensus 98 ~~~~~fD~v~~~~~l~~~~~-~-------------------------------------~~~l~~~~~~L~pgG~l~i~~ 139 (219)
T 1vlm_A 98 LKDESFDFALMVTTICFVDD-P-------------------------------------ERALKEAYRILKKGGYLIVGI 139 (219)
T ss_dssp SCTTCEEEEEEESCGGGSSC-H-------------------------------------HHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCeeEEEEcchHhhccC-H-------------------------------------HHHHHHHHHHcCCCcEEEEEE
Confidence 46789999999999999632 1 236777778899999999988
Q ss_pred cCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEe
Q 017439 229 PTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTF 300 (371)
Q Consensus 229 ~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~ 300 (371)
+...+ .+.. .+..+ ..+ ..+.-...+.+.+|+++++++.| |+++.+...
T Consensus 140 ~~~~~-----------~~~~---~~~~~-~~~-------~~~~~~~~~~~~~~l~~~l~~~G-f~~~~~~~~ 188 (219)
T 1vlm_A 140 VDRES-----------FLGR---EYEKN-KEK-------SVFYKNARFFSTEELMDLMRKAG-FEEFKVVQT 188 (219)
T ss_dssp ECSSS-----------HHHH---HHHHT-TTC--------CCSTTCCCCCHHHHHHHHHHTT-CEEEEEEEE
T ss_pred eCCcc-----------HHHH---HHHHH-hcC-------cchhcccccCCHHHHHHHHHHCC-CeEEEEecc
Confidence 65432 1111 11111 111 12333456789999999999987 998887765
|
| >2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A* | Back alignment and structure |
|---|
Probab=98.68 E-value=6.5e-07 Score=83.68 Aligned_cols=78 Identities=14% Similarity=0.090 Sum_probs=56.0
Q ss_pred CceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEecCc
Q 017439 152 SSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTPTI 231 (371)
Q Consensus 152 ~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~gr 231 (371)
+++|+|++..+||+| |. .|...+++.-++-|+|||++++.....
T Consensus 151 ~~FD~V~~~~~l~~l---~~---------------------------------~~~~~~l~~~~~~LkpGG~l~l~~~~~ 194 (252)
T 2gb4_A 151 GKFDRIWDRGALVAI---NP---------------------------------GDHDRYADIILSLLRKEFQYLVAVLSY 194 (252)
T ss_dssp CCEEEEEESSSTTTS---CG---------------------------------GGHHHHHHHHHHTEEEEEEEEEEEEEC
T ss_pred CCEEEEEEhhhhhhC---CH---------------------------------HHHHHHHHHHHHHcCCCeEEEEEEEec
Confidence 799999999999996 32 123447788889999999997654332
Q ss_pred CCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEee
Q 017439 232 RDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFT 301 (371)
Q Consensus 232 ~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~~ 301 (371)
+... ..-|.|..+.+|+++.++. + |+|+.++.+.
T Consensus 195 ~~~~----------------------------------~~g~~~~~~~~el~~~l~~-~-f~v~~~~~~~ 228 (252)
T 2gb4_A 195 DPTK----------------------------------HAGPPFYVPSAELKRLFGT-K-CSMQCLEEVD 228 (252)
T ss_dssp CTTS----------------------------------CCCSSCCCCHHHHHHHHTT-T-EEEEEEEEEE
T ss_pred CCcc----------------------------------CCCCCCCCCHHHHHHHhhC-C-eEEEEEeccc
Confidence 1100 0113445789999999987 4 9999998763
|
| >2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus} | Back alignment and structure |
|---|
Probab=98.68 E-value=1.8e-07 Score=89.72 Aligned_cols=109 Identities=12% Similarity=0.078 Sum_probs=66.9
Q ss_pred CCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEe
Q 017439 149 FPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLT 228 (371)
Q Consensus 149 fP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~ 228 (371)
+|++++|+|.|..++||+-..+ |...+|+.-++-|+|||+|++++
T Consensus 125 ~~~~~FD~V~~~~~lhy~~~~~-----------------------------------~~~~~l~~~~r~LkpGG~~i~~~ 169 (302)
T 2vdw_A 125 FYFGKFNIIDWQFAIHYSFHPR-----------------------------------HYATVMNNLSELTASGGKVLITT 169 (302)
T ss_dssp CCSSCEEEEEEESCGGGTCSTT-----------------------------------THHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCCCeeEEEECchHHHhCCHH-----------------------------------HHHHHHHHHHHHcCCCCEEEEEe
Confidence 5788999999999999954322 12357999999999999999998
Q ss_pred cCcCCCCCCCC------CCCcchHHHHHHHHHHHHHcCCCchh-------hhcccCcccccCCHHHHHHHhhcCCceEEE
Q 017439 229 PTIRDGIPMFS------TPEGTNFDYLGSCLYDLANMGLIAEE-------KVDSFNVPMYYPFLGELMGHIKRNKNFSIE 295 (371)
Q Consensus 229 ~gr~~~~~~~~------~~~~~~~~~l~~al~~mv~eGli~~e-------~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~ 295 (371)
+.+........ .+....++. |. .-..++.+ +...-..|-|.-+.+|+++++++.| |+++
T Consensus 170 ~~~~~~~~~~~~~~~~i~~~~~~~~~----~~---~~~~~~~~~~~~~~~~~~~~~~~e~~v~~~el~~l~~~~G-l~lv 241 (302)
T 2vdw_A 170 MDGDKLSKLTDKKTFIIHKNLPSSEN----YM---SVEKIADDRIVVYNPSTMSTPMTEYIIKKNDIVRVFNEYG-FVLV 241 (302)
T ss_dssp ECHHHHTTCCSCEEEECCSSSCTTTS----EE---EECEEETTEEEEBCTTTBSSCEEEECCCHHHHHHHHHHTT-EEEE
T ss_pred CCHHHHHHHHhcCCcccccccccccc----ee---eeccccccccceeeccccCCCceeeeeEHHHHHHHHHHCC-CEEE
Confidence 76532110000 000000000 00 00000000 0112356778888999999999987 9998
Q ss_pred EEEEe
Q 017439 296 IMNTF 300 (371)
Q Consensus 296 ~~e~~ 300 (371)
....+
T Consensus 242 ~~~~f 246 (302)
T 2vdw_A 242 DNVDF 246 (302)
T ss_dssp EEEEH
T ss_pred EecCh
Confidence 88766
|
| >3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=98.68 E-value=2.8e-08 Score=92.29 Aligned_cols=149 Identities=19% Similarity=0.160 Sum_probs=91.2
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccC
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVP 141 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvp 141 (371)
....+|+|+|||+|..+..+. + | ..+|+..|+...- -...+..+ +--|..+.
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~--------~-------------~---~~~v~gvD~s~~~-~~~a~~~~--~~~~~~~d- 84 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALA--------N-------------Q---GLFVYAVEPSIVM-RQQAVVHP--QVEWFTGY- 84 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHH--------T-------------T---TCEEEEECSCHHH-HHSSCCCT--TEEEECCC-
T ss_pred CCCCEEEEEcCcccHHHHHHH--------h-------------C---CCEEEEEeCCHHH-HHHHHhcc--CCEEEECc-
Confidence 345799999999999888766 2 1 2367777765422 11111111 22344443
Q ss_pred CCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccC
Q 017439 142 GSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPG 221 (371)
Q Consensus 142 gSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 221 (371)
+..--+|++++|+|+|+.++||+.. +..+|+.-.+-|+ |
T Consensus 85 --~~~~~~~~~~fD~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~Lk-g 123 (261)
T 3ege_A 85 --AENLALPDKSVDGVISILAIHHFSH--------------------------------------LEKSFQEMQRIIR-D 123 (261)
T ss_dssp --TTSCCSCTTCBSEEEEESCGGGCSS--------------------------------------HHHHHHHHHHHBC-S
T ss_pred --hhhCCCCCCCEeEEEEcchHhhccC--------------------------------------HHHHHHHHHHHhC-C
Confidence 3332367899999999999999632 2346777788999 9
Q ss_pred ceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEee
Q 017439 222 GLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFT 301 (371)
Q Consensus 222 G~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~~ 301 (371)
|++++.....+.... .+....+..... ....++++.+++. .+++.| |++...+.++
T Consensus 124 G~~~~~~~~~~~~~~------~~~~~~~~~~~~----------------~~~~~~~~~~~~~-~l~~aG-F~~v~~~~~~ 179 (261)
T 3ege_A 124 GTIVLLTFDIRLAQR------IWLYDYFPFLWE----------------DALRFLPLDEQIN-LLQENT-KRRVEAIPFL 179 (261)
T ss_dssp SCEEEEEECGGGCCC------CGGGGTCHHHHH----------------HHHTSCCHHHHHH-HHHHHH-CSEEEEEECC
T ss_pred cEEEEEEcCCchhHH------HHHHHHHHHHhh----------------hhhhhCCCHHHHH-HHHHcC-CCceeEEEec
Confidence 988888876543211 001111111111 0013477899999 898876 9988888774
Q ss_pred cC
Q 017439 302 HP 303 (371)
Q Consensus 302 ~p 303 (371)
.|
T Consensus 180 ~p 181 (261)
T 3ege_A 180 LP 181 (261)
T ss_dssp EE
T ss_pred CC
Confidence 44
|
| >2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ... | Back alignment and structure |
|---|
Probab=98.68 E-value=4.3e-08 Score=92.29 Aligned_cols=90 Identities=17% Similarity=0.159 Sum_probs=65.0
Q ss_pred CCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEe
Q 017439 149 FPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLT 228 (371)
Q Consensus 149 fP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~ 228 (371)
+|++++|+|+|+.+|||+..-. .|+..+|+.-++-|+|||+|++..
T Consensus 170 ~~~~~fD~V~~~~~l~~~~~~~----------------------------------~~~~~~l~~~~r~LkpGG~l~~~~ 215 (289)
T 2g72_A 170 PAPLPADALVSAFCLEAVSPDL----------------------------------ASFQRALDHITTLLRPGGHLLLIG 215 (289)
T ss_dssp SSCSSEEEEEEESCHHHHCSSH----------------------------------HHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred cCCCCCCEEEehhhhhhhcCCH----------------------------------HHHHHHHHHHHHhcCCCCEEEEEE
Confidence 6778999999999999965321 345667888899999999999974
Q ss_pred cCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEeecC
Q 017439 229 PTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFTHP 303 (371)
Q Consensus 229 ~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~~~p 303 (371)
.-... .+. .| .-..|.++.+.+|+++++++.| |+++.++.++.|
T Consensus 216 ~~~~~-----------~~~-----------~~--------~~~~~~~~~~~~~l~~~l~~aG-f~~~~~~~~~~~ 259 (289)
T 2g72_A 216 ALEES-----------WYL-----------AG--------EARLTVVPVSEEEVREALVRSG-YKVRDLRTYIMP 259 (289)
T ss_dssp EESCC-----------EEE-----------ET--------TEEEECCCCCHHHHHHHHHHTT-EEEEEEEEEECC
T ss_pred ecCcc-----------eEE-----------cC--------CeeeeeccCCHHHHHHHHHHcC-CeEEEeeEeecc
Confidence 21110 000 01 1123566789999999999987 999999887644
|
| >3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.67 E-value=6.9e-08 Score=86.43 Aligned_cols=143 Identities=12% Similarity=0.013 Sum_probs=92.3
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CCCcceeeec
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PLSKKYFATG 139 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~~~~~f~~g 139 (371)
...+|+|+|||+|..+..+. + .. .| ..+++.-|.-..--...=+.+ ...+-.|..+
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~--------~-~~---------~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~ 95 (219)
T 3dh0_A 37 EGMTVLDVGTGAGFYLPYLS--------K-MV---------GE---KGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKS 95 (219)
T ss_dssp TTCEEEESSCTTCTTHHHHH--------H-HH---------TT---TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEEC
T ss_pred CCCEEEEEecCCCHHHHHHH--------H-Hh---------CC---CcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEec
Confidence 45699999999999998877 2 21 12 346777776543322221111 1112233433
Q ss_pred cCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcc
Q 017439 140 VPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELV 219 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 219 (371)
. +..--+|++++|+++++.++||+.+ ...+|+.-.+-|+
T Consensus 96 d---~~~~~~~~~~fD~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~Lk 134 (219)
T 3dh0_A 96 E---ENKIPLPDNTVDFIFMAFTFHELSE--------------------------------------PLKFLEELKRVAK 134 (219)
T ss_dssp B---TTBCSSCSSCEEEEEEESCGGGCSS--------------------------------------HHHHHHHHHHHEE
T ss_pred c---cccCCCCCCCeeEEEeehhhhhcCC--------------------------------------HHHHHHHHHHHhC
Confidence 3 2333368899999999999999632 1236777778999
Q ss_pred cCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEE
Q 017439 220 PGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNT 299 (371)
Q Consensus 220 pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~ 299 (371)
|||++++........... .-.....+.+|++..+++.| |++.....
T Consensus 135 pgG~l~i~~~~~~~~~~~---------------------------------~~~~~~~~~~~~~~~l~~~G-f~~~~~~~ 180 (219)
T 3dh0_A 135 PFAYLAIIDWKKEERDKG---------------------------------PPPEEVYSEWEVGLILEDAG-IRVGRVVE 180 (219)
T ss_dssp EEEEEEEEEECSSCCSSS---------------------------------CCGGGSCCHHHHHHHHHHTT-CEEEEEEE
T ss_pred CCeEEEEEEecccccccC---------------------------------CchhcccCHHHHHHHHHHCC-CEEEEEEe
Confidence 999999987655432110 00122458999999999987 99888776
Q ss_pred ee
Q 017439 300 FT 301 (371)
Q Consensus 300 ~~ 301 (371)
+.
T Consensus 181 ~~ 182 (219)
T 3dh0_A 181 VG 182 (219)
T ss_dssp ET
T ss_pred eC
Confidence 63
|
| >3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A* | Back alignment and structure |
|---|
Probab=98.66 E-value=3.6e-07 Score=87.05 Aligned_cols=100 Identities=17% Similarity=0.289 Sum_probs=65.1
Q ss_pred CCCceeEEEecCCcccc-CCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEe
Q 017439 150 PESSLHVAHTSNALPWL-SKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLT 228 (371)
Q Consensus 150 P~~Svd~~~Ss~alHWL-S~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~ 228 (371)
|++++|+|+|+.++||+ ... .|...+|+.-++-|+|||++++++
T Consensus 111 ~~~~fD~V~~~~~l~~~~~~~-----------------------------------~~~~~~l~~~~~~LkpgG~li~~~ 155 (313)
T 3bgv_A 111 PQMCFDICSCQFVCHYSFESY-----------------------------------EQADMMLRNACERLSPGGYFIGTT 155 (313)
T ss_dssp TTCCEEEEEEETCGGGGGGSH-----------------------------------HHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CCCCEEEEEEecchhhccCCH-----------------------------------HHHHHHHHHHHHHhCCCcEEEEec
Confidence 35699999999999996 221 344568888889999999999998
Q ss_pred cCcCCCCCCCCCCCcchHHHHHHHHHHHHH--cC-------CCchhhh------------cccCcccccCCHHHHHHHhh
Q 017439 229 PTIRDGIPMFSTPEGTNFDYLGSCLYDLAN--MG-------LIAEEKV------------DSFNVPMYYPFLGELMGHIK 287 (371)
Q Consensus 229 ~gr~~~~~~~~~~~~~~~~~l~~al~~mv~--eG-------li~~e~~------------d~fn~P~Y~ps~eE~~~~i~ 287 (371)
++.+. +.+.|..... -| ..+.+++ ....+|.|..+.+++.++++
T Consensus 156 ~~~~~---------------l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~f~l~~~~~~~~~~~~~~~~~~l~~ 220 (313)
T 3bgv_A 156 PNSFE---------------LIRRLEASETESFGNEIYTVKFQKKGDYPLFGCKYDFNLEGVVDVPEFLVYFPLLNEMAK 220 (313)
T ss_dssp ECHHH---------------HHHHHTTSSSSEEECSSEEEEESCSSCCCSSCCEEEEEEC---CCEEECCCHHHHHHHGG
T ss_pred CChHH---------------HHHHHHhhccCccCCeeEEEEeCCCCCCCCccceEEEEECCcccCcceEEcHHHHHHHHH
Confidence 76421 1111111000 00 0010011 23457788889999999999
Q ss_pred cCCceEEEEEEEe
Q 017439 288 RNKNFSIEIMNTF 300 (371)
Q Consensus 288 ~~g~F~I~~~e~~ 300 (371)
+.| |+++..+.+
T Consensus 221 ~~G-~~~v~~~~f 232 (313)
T 3bgv_A 221 KYN-MKLVYKKTF 232 (313)
T ss_dssp GGT-EEEEEEEEH
T ss_pred HcC-cEEEEecCH
Confidence 987 999888766
|
| >3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A* | Back alignment and structure |
|---|
Probab=98.66 E-value=1e-06 Score=83.85 Aligned_cols=149 Identities=9% Similarity=0.094 Sum_probs=89.6
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhh---hhcCCC-Ccceeee
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTL---FKSVPL-SKKYFAT 138 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~l---F~~l~~-~~~~f~~ 138 (371)
...+|+|+|||+|..++.+... + ..+|+.-|+...--... ++...- .+--|..
T Consensus 117 ~~~~vLDiGcG~G~~~~~la~~---------~--------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~ 173 (312)
T 3vc1_A 117 PDDTLVDAGCGRGGSMVMAHRR---------F--------------GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRV 173 (312)
T ss_dssp TTCEEEEESCTTSHHHHHHHHH---------H--------------CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHH---------c--------------CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEE
Confidence 4579999999999999887732 1 01344444432211111 111110 1122333
Q ss_pred ccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 139 GVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 139 gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
+. +.+--+|++++|+|+++.++||+. +. .+|+.-.+-|
T Consensus 174 ~d---~~~~~~~~~~fD~V~~~~~l~~~~--~~-------------------------------------~~l~~~~~~L 211 (312)
T 3vc1_A 174 CN---MLDTPFDKGAVTASWNNESTMYVD--LH-------------------------------------DLFSEHSRFL 211 (312)
T ss_dssp CC---TTSCCCCTTCEEEEEEESCGGGSC--HH-------------------------------------HHHHHHHHHE
T ss_pred CC---hhcCCCCCCCEeEEEECCchhhCC--HH-------------------------------------HHHHHHHHHc
Confidence 33 222226789999999999999963 21 2677778899
Q ss_pred ccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEE
Q 017439 219 VPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMN 298 (371)
Q Consensus 219 ~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e 298 (371)
+|||++++......+... .....+..+...+ .| ..++.+++++++++.| |+++.++
T Consensus 212 kpgG~l~~~~~~~~~~~~----~~~~~~~~~~~~~------------------~~-~~~s~~~~~~~l~~aG-f~~~~~~ 267 (312)
T 3vc1_A 212 KVGGRYVTITGCWNPRYG----QPSKWVSQINAHF------------------EC-NIHSRREYLRAMADNR-LVPHTIV 267 (312)
T ss_dssp EEEEEEEEEEEEECTTTC----SCCHHHHHHHHHH------------------TC-CCCBHHHHHHHHHTTT-EEEEEEE
T ss_pred CCCcEEEEEEcccccccc----chhHHHHHHHhhh------------------cC-CCCCHHHHHHHHHHCC-CEEEEEE
Confidence 999999998876654321 0011111111110 11 3788999999999987 9999888
Q ss_pred Ee
Q 017439 299 TF 300 (371)
Q Consensus 299 ~~ 300 (371)
.+
T Consensus 268 ~~ 269 (312)
T 3vc1_A 268 DL 269 (312)
T ss_dssp EC
T ss_pred eC
Confidence 66
|
| >3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=98.64 E-value=6.4e-07 Score=86.94 Aligned_cols=151 Identities=16% Similarity=0.112 Sum_probs=94.3
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhc-CCCCc-ceeeec
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKS-VPLSK-KYFATG 139 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~-l~~~~-~~f~~g 139 (371)
+...+|+|+|||+|..+..+. + + .| ..+++.-|+|..-- +. +.... .--+.-
T Consensus 183 ~~~~~vLDvG~G~G~~~~~l~--------~-~----------~p---~~~~~~~D~~~~~~----~~~~~~~~~~~~v~~ 236 (348)
T 3lst_A 183 PATGTVADVGGGRGGFLLTVL--------R-E----------HP---GLQGVLLDRAEVVA----RHRLDAPDVAGRWKV 236 (348)
T ss_dssp CSSEEEEEETCTTSHHHHHHH--------H-H----------CT---TEEEEEEECHHHHT----TCCCCCGGGTTSEEE
T ss_pred cCCceEEEECCccCHHHHHHH--------H-H----------CC---CCEEEEecCHHHhh----cccccccCCCCCeEE
Confidence 456899999999999888777 3 2 33 56788888864211 11 11100 001223
Q ss_pred cCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcc
Q 017439 140 VPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELV 219 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 219 (371)
+.|+|+ .-+| ++|+++++.+||.+ |+ .+...+|+.-++-|+
T Consensus 237 ~~~d~~-~~~p--~~D~v~~~~vlh~~---~d---------------------------------~~~~~~L~~~~~~Lk 277 (348)
T 3lst_A 237 VEGDFL-REVP--HADVHVLKRILHNW---GD---------------------------------EDSVRILTNCRRVMP 277 (348)
T ss_dssp EECCTT-TCCC--CCSEEEEESCGGGS---CH---------------------------------HHHHHHHHHHHHTCC
T ss_pred EecCCC-CCCC--CCcEEEEehhccCC---CH---------------------------------HHHHHHHHHHHHhcC
Confidence 445666 3456 99999999999962 32 233457888889999
Q ss_pred cCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEE
Q 017439 220 PGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNT 299 (371)
Q Consensus 220 pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~ 299 (371)
|||++++.-...++... . .+....+ +.-|+..| -..++.+|+++++++.| |+++++..
T Consensus 278 pgG~l~i~e~~~~~~~~-----~--~~~~~~d-~~~~~~~~-------------~~~~t~~e~~~ll~~aG-f~~~~~~~ 335 (348)
T 3lst_A 278 AHGRVLVIDAVVPEGND-----A--HQSKEMD-FMMLAART-------------GQERTAAELEPLFTAAG-LRLDRVVG 335 (348)
T ss_dssp TTCEEEEEECCBCSSSS-----C--CHHHHHH-HHHHHTTS-------------CCCCBHHHHHHHHHHTT-EEEEEEEE
T ss_pred CCCEEEEEEeccCCCCC-----c--chhhhcC-hhhhhcCC-------------CcCCCHHHHHHHHHHCC-CceEEEEE
Confidence 99999987655443211 0 1111111 11122211 12578999999999988 99887765
|
| >3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.63 E-value=5.1e-07 Score=85.31 Aligned_cols=151 Identities=15% Similarity=0.144 Sum_probs=82.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhc---C--CCCcceee
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKS---V--PLSKKYFA 137 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~---l--~~~~~~f~ 137 (371)
...+|+|+|||+|..+..+.. ++. | ..+|+..|+-..-....=+. . ...+--|.
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~---------~~~---------~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~ 94 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQ---------ELK---------P---FEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFK 94 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHH---------HSS---------C---CSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHH---------hCC---------C---CCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEE
Confidence 468999999999999988872 110 1 22455666543322111111 1 01112233
Q ss_pred eccCCCcc---cccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHH
Q 017439 138 TGVPGSFH---GRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNAR 214 (371)
Q Consensus 138 ~gvpgSFy---~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~R 214 (371)
.+....+- ...++.+++|+|+++.++||+ . | ..+|+.-
T Consensus 95 ~~d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~-~-~-------------------------------------~~~l~~~ 135 (299)
T 3g5t_A 95 ISSSDDFKFLGADSVDKQKIDMITAVECAHWF-D-F-------------------------------------EKFQRSA 135 (299)
T ss_dssp ECCTTCCGGGCTTTTTSSCEEEEEEESCGGGS-C-H-------------------------------------HHHHHHH
T ss_pred EcCHHhCCccccccccCCCeeEEeHhhHHHHh-C-H-------------------------------------HHHHHHH
Confidence 33211110 012233899999999999997 2 2 1267777
Q ss_pred HhhcccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCccccc-CCHHHHHHHhhcCC
Q 017439 215 AQELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYY-PFLGELMGHIKRNK 290 (371)
Q Consensus 215 a~EL~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~-ps~eE~~~~i~~~g 290 (371)
++-|+|||+|++...+.+..... ..+...+.++.... ...-|++. |..+.+++.+++.|
T Consensus 136 ~~~LkpgG~l~i~~~~~~~~~~~---------~~~~~~~~~~~~~~--------~~~~~~w~~p~~~~~~~~l~~~g 195 (299)
T 3g5t_A 136 YANLRKDGTIAIWGYADPIFPDY---------PEFDDLMIEVPYGK--------QGLGPYWEQPGRSRLRNMLKDSH 195 (299)
T ss_dssp HHHEEEEEEEEEEEEEEEECTTC---------GGGTTHHHHHHHCT--------TTTGGGSCTTHHHHHHTTTTTCC
T ss_pred HHhcCCCcEEEEEecCCccccCc---------HHHHHHHHHhccCc--------ccccchhhchhhHHHHHhhhccC
Confidence 78999999999966554321100 01111233222211 02234444 88889999998877
|
| >3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=98.60 E-value=1.7e-07 Score=84.95 Aligned_cols=167 Identities=20% Similarity=0.207 Sum_probs=92.0
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPG 142 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpg 142 (371)
...+|+|+|||+|..+..+. + + + . . +++..|+...--...=+.+...+--|..+
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~--------~-~----~-----~----~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~--- 96 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAH--------E-H----G-----A----S-YVLGLDLSEKMLARARAAGPDTGITYERA--- 96 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHH--------H-T----T-----C----S-EEEEEESCHHHHHHHHHTSCSSSEEEEEC---
T ss_pred CCCEEEEEcCcCCHHHHHHH--------H-C----C-----C----C-eEEEEcCCHHHHHHHHHhcccCCceEEEc---
Confidence 45799999999999887665 2 1 0 1 1 46666664433222222222222223333
Q ss_pred CcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCc
Q 017439 143 SFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGG 222 (371)
Q Consensus 143 SFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 222 (371)
.+..-.+|++++|+++++.++||+.. ...+|+.-++-|+|||
T Consensus 97 d~~~~~~~~~~fD~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~L~pgG 138 (243)
T 3bkw_A 97 DLDKLHLPQDSFDLAYSSLALHYVED--------------------------------------VARLFRTVHQALSPGG 138 (243)
T ss_dssp CGGGCCCCTTCEEEEEEESCGGGCSC--------------------------------------HHHHHHHHHHHEEEEE
T ss_pred ChhhccCCCCCceEEEEeccccccch--------------------------------------HHHHHHHHHHhcCcCc
Confidence 33333367899999999999999632 1236777778999999
Q ss_pred eEEEEecCcCCCCCCCCCC----Ccc-hHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEE
Q 017439 223 LLLLLTPTIRDGIPMFSTP----EGT-NFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIM 297 (371)
Q Consensus 223 ~lvl~~~gr~~~~~~~~~~----~~~-~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~ 297 (371)
++++............... .+. .+. +.....++... ..+-.-.+..|.++.+|+++++++.| |+++.+
T Consensus 139 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~-~~~~~~~~~~~~~t~~~~~~~l~~aG-F~~~~~ 211 (243)
T 3bkw_A 139 HFVFSTEHPIYMAPARPGWAIDAEGRRTWP-----IDRYLVEGPRK-TDWLAKGVVKHHRTVGTTLNALIRSG-FAIEHV 211 (243)
T ss_dssp EEEEEEECHHHHCCSSCSCEECTTSCEEEE-----ECCTTCCEEEC-TTHHHHSCCEEECCHHHHHHHHHHTT-CEEEEE
T ss_pred EEEEEeCCcccccCcCcceeecCCCceEEe-----eccccccccee-eeeccCceEEEeccHHHHHHHHHHcC-CEeeee
Confidence 9999875321100000000 000 000 00000000000 00000134567789999999999987 999888
Q ss_pred EEe
Q 017439 298 NTF 300 (371)
Q Consensus 298 e~~ 300 (371)
+..
T Consensus 212 ~~~ 214 (243)
T 3bkw_A 212 EEF 214 (243)
T ss_dssp EEC
T ss_pred ccC
Confidence 754
|
| >3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=98.60 E-value=1.3e-06 Score=84.33 Aligned_cols=151 Identities=15% Similarity=0.132 Sum_probs=93.4
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhh----cCCCCcceeeec
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFK----SVPLSKKYFATG 139 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~----~l~~~~~~f~~g 139 (371)
..+|+|+|||+|..+..+. + + .| ..+++.-|+|. .-...+ ..+...+ +.-
T Consensus 180 ~~~vlDvG~G~G~~~~~l~--------~-~----------~p---~~~~~~~D~~~--~~~~a~~~~~~~~~~~~--v~~ 233 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVL--------R-R----------HP---QLTGQIWDLPT--TRDAARKTIHAHDLGGR--VEF 233 (352)
T ss_dssp CCEEEEETCTTCHHHHHHH--------H-H----------CT---TCEEEEEECGG--GHHHHHHHHHHTTCGGG--EEE
T ss_pred CCEEEEeCCCcCHHHHHHH--------H-h----------CC---CCeEEEEECHH--HHHHHHHHHHhcCCCCc--eEE
Confidence 6899999999999888777 3 2 23 45677789864 111111 1111112 222
Q ss_pred cCCCccccc-CCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 140 VPGSFHGRL-FPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 140 vpgSFy~rL-fP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
+.|.|...- ++++++|+++++..||++ |+ ++...+|+.-++-|
T Consensus 234 ~~~d~~~~~~~~~~~~D~v~~~~vlh~~---~~---------------------------------~~~~~~l~~~~~~L 277 (352)
T 3mcz_A 234 FEKNLLDARNFEGGAADVVMLNDCLHYF---DA---------------------------------REAREVIGHAAGLV 277 (352)
T ss_dssp EECCTTCGGGGTTCCEEEEEEESCGGGS---CH---------------------------------HHHHHHHHHHHHTE
T ss_pred EeCCcccCcccCCCCccEEEEecccccC---CH---------------------------------HHHHHHHHHHHHHc
Confidence 334555433 366779999999999974 32 23445788888999
Q ss_pred ccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHH-cCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEE
Q 017439 219 VPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLAN-MGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIM 297 (371)
Q Consensus 219 ~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~-eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~ 297 (371)
+|||++++.-...++... ...+..+..... |+. .+ ...++.+|+++++++.| |++++.
T Consensus 278 ~pgG~l~i~e~~~~~~~~------~~~~~~~~~~~~-~~~~~~-------------~~~~t~~e~~~ll~~aG-f~~~~~ 336 (352)
T 3mcz_A 278 KPGGALLILTMTMNDDRV------TPALSADFSLHM-MVNTNH-------------GELHPTPWIAGVVRDAG-LAVGER 336 (352)
T ss_dssp EEEEEEEEEEECCCTTSS------SSHHHHHHHHHH-HHHSTT-------------CCCCCHHHHHHHHHHTT-CEEEEE
T ss_pred CCCCEEEEEEeccCCCCC------CCchHHHhhHHH-HhhCCC-------------CCcCCHHHHHHHHHHCC-Cceeee
Confidence 999999987755543311 112222222221 211 11 11578999999999987 998773
|
| >2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42 | Back alignment and structure |
|---|
Probab=98.59 E-value=1.7e-07 Score=85.69 Aligned_cols=144 Identities=15% Similarity=0.073 Sum_probs=89.5
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCC---cceeeec
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLS---KKYFATG 139 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~---~~~f~~g 139 (371)
...+|+|+|||+|..+..+. . +. ..+++..|.-..--...=+.+... +--|..+
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~--------~-~~--------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~ 135 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLL--------L-PL--------------FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCC 135 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTT--------T-TT--------------CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEEC
T ss_pred CCCEEEEECCCCCHHHHHHH--------H-hc--------------CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEc
Confidence 46799999999999888665 2 11 114555565443322222222211 1113332
Q ss_pred cCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcc
Q 017439 140 VPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELV 219 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 219 (371)
.+..-.++++++|+++++.++|++.. .++..+|+.-.+-|+
T Consensus 136 ---d~~~~~~~~~~fD~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~Lk 176 (241)
T 2ex4_A 136 ---GLQDFTPEPDSYDVIWIQWVIGHLTD------------------------------------QHLAEFLRRCKGSLR 176 (241)
T ss_dssp ---CGGGCCCCSSCEEEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHEE
T ss_pred ---ChhhcCCCCCCEEEEEEcchhhhCCH------------------------------------HHHHHHHHHHHHhcC
Confidence 23333356779999999999999532 123457888888999
Q ss_pred cCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEE
Q 017439 220 PGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNT 299 (371)
Q Consensus 220 pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~ 299 (371)
|||++++......+. . .|+ . .-+.+.++.+|+++++++.| |+++..+.
T Consensus 177 pgG~l~i~~~~~~~~-~--------~~~---------------------~-~~~~~~~~~~~~~~~l~~aG-f~~~~~~~ 224 (241)
T 2ex4_A 177 PNGIIVIKDNMAQEG-V--------ILD---------------------D-VDSSVCRDLDVVRRIICSAG-LSLLAEER 224 (241)
T ss_dssp EEEEEEEEEEEBSSS-E--------EEE---------------------T-TTTEEEEBHHHHHHHHHHTT-CCEEEEEE
T ss_pred CCeEEEEEEccCCCc-c--------eec---------------------c-cCCcccCCHHHHHHHHHHcC-CeEEEeee
Confidence 999999977554331 0 000 0 01233569999999999987 99988876
Q ss_pred e
Q 017439 300 F 300 (371)
Q Consensus 300 ~ 300 (371)
.
T Consensus 225 ~ 225 (241)
T 2ex4_A 225 Q 225 (241)
T ss_dssp C
T ss_pred c
Confidence 5
|
| >4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A* | Back alignment and structure |
|---|
Probab=98.56 E-value=1e-06 Score=86.11 Aligned_cols=152 Identities=16% Similarity=0.122 Sum_probs=95.3
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhc-CCC--Ccceeeec
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKS-VPL--SKKYFATG 139 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~-l~~--~~~~f~~g 139 (371)
..-+|+|+|||+|..++.++ + + .| .+.+..-|+|.- -...+. ++. ..+ +.-
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~--------~-~----------~p---~~~~~~~dlp~v--~~~a~~~~~~~~~~r--v~~ 232 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECM--------S-L----------YP---GCKITVFDIPEV--VWTAKQHFSFQEEEQ--IDF 232 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHH--------H-H----------CS---SCEEEEEECHHH--HHHHHHHSCC--CCS--EEE
T ss_pred cCCeEEeeCCCCCHHHHHHH--------H-h----------CC---CceeEeccCHHH--HHHHHHhhhhcccCc--eee
Confidence 44689999999999887776 3 3 34 567888899852 111111 111 112 334
Q ss_pred cCCCcccccCCCCceeEEEecCCcc-ccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 140 VPGSFHGRLFPESSLHVAHTSNALP-WLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~alH-WLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
++|+|+..-+| ..|+++..+.|| | |+ ++-..+|+.-++-|
T Consensus 233 ~~gD~~~~~~~--~~D~~~~~~vlh~~----~d---------------------------------~~~~~iL~~~~~al 273 (353)
T 4a6d_A 233 QEGDFFKDPLP--EADLYILARVLHDW----AD---------------------------------GKCSHLLERIYHTC 273 (353)
T ss_dssp EESCTTTSCCC--CCSEEEEESSGGGS----CH---------------------------------HHHHHHHHHHHHHC
T ss_pred ecCccccCCCC--CceEEEeeeecccC----CH---------------------------------HHHHHHHHHHHhhC
Confidence 56789876444 469999999999 6 43 23344788888999
Q ss_pred ccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEE
Q 017439 219 VPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMN 298 (371)
Q Consensus 219 ~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e 298 (371)
+|||++++.=.-.++... ...+..+.+ +.-|+.-| --.||.+|+++++++.| |++.++.
T Consensus 274 ~pgg~lli~e~~~~~~~~------~~~~~~~~d-l~ml~~~~-------------g~ert~~e~~~ll~~AG-f~~v~v~ 332 (353)
T 4a6d_A 274 KPGGGILVIESLLDEDRR------GPLLTQLYS-LNMLVQTE-------------GQERTPTHYHMLLSSAG-FRDFQFK 332 (353)
T ss_dssp CTTCEEEEEECCCCTTSC------CCHHHHHHH-HHHHHSSS-------------CCCCCHHHHHHHHHHHT-CEEEEEE
T ss_pred CCCCEEEEEEeeeCCCCC------CCHHHHHHH-HHHHHhCC-------------CcCCCHHHHHHHHHHCC-CceEEEE
Confidence 999999887544432211 111222111 12122211 11589999999999988 9988775
Q ss_pred Ee
Q 017439 299 TF 300 (371)
Q Consensus 299 ~~ 300 (371)
..
T Consensus 333 ~~ 334 (353)
T 4a6d_A 333 KT 334 (353)
T ss_dssp CC
T ss_pred Ec
Confidence 43
|
| >3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis} | Back alignment and structure |
|---|
Probab=98.56 E-value=3.4e-07 Score=86.98 Aligned_cols=165 Identities=9% Similarity=-0.022 Sum_probs=95.5
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC---Cc-ceeee
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL---SK-KYFAT 138 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~---~~-~~f~~ 138 (371)
...+|+|+|||+|..++.+. . . . .| ..+|+.-|+-..--...=+.+.. .. --|..
T Consensus 118 ~~~~vLDiGcG~G~~~~~la--------~-~-~--------~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~ 176 (305)
T 3ocj_A 118 PGCVVASVPCGWMSELLALD--------Y-S-A--------CP---GVQLVGIDYDPEALDGATRLAAGHALAGQITLHR 176 (305)
T ss_dssp TTCEEEETTCTTCHHHHTSC--------C-T-T--------CT---TCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHH--------H-h-c--------CC---CCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEE
Confidence 45789999999999887653 1 0 0 23 34677777654432222222221 11 22333
Q ss_pred ccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 139 GVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 139 gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
+. +.+--+| +++|+++++.++||+... .....||+.-.+-|
T Consensus 177 ~d---~~~~~~~-~~fD~v~~~~~~~~~~~~-----------------------------------~~~~~~l~~~~~~L 217 (305)
T 3ocj_A 177 QD---AWKLDTR-EGYDLLTSNGLNIYEPDD-----------------------------------ARVTELYRRFWQAL 217 (305)
T ss_dssp CC---GGGCCCC-SCEEEEECCSSGGGCCCH-----------------------------------HHHHHHHHHHHHHE
T ss_pred Cc---hhcCCcc-CCeEEEEECChhhhcCCH-----------------------------------HHHHHHHHHHHHhc
Confidence 33 3333345 999999999999984321 12234677888899
Q ss_pred ccCceEEEEecCcCCCCCCCCCCC--cc---hHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceE
Q 017439 219 VPGGLLLLLTPTIRDGIPMFSTPE--GT---NFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFS 293 (371)
Q Consensus 219 ~pGG~lvl~~~gr~~~~~~~~~~~--~~---~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~ 293 (371)
+|||++++....++........+. .. ........+.+....+. ..+++.+|+++.+++.| |+
T Consensus 218 kpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~l~~aG-F~ 284 (305)
T 3ocj_A 218 KPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRW------------NALRTHAQTRAQLEEAG-FT 284 (305)
T ss_dssp EEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSC------------CCCCCHHHHHHHHHHTT-CE
T ss_pred CCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhh------------hccCCHHHHHHHHHHCC-CE
Confidence 999999999987754322111100 00 01111112221111111 13579999999999987 99
Q ss_pred EEEEEEe
Q 017439 294 IEIMNTF 300 (371)
Q Consensus 294 I~~~e~~ 300 (371)
+.+++..
T Consensus 285 ~v~~~~~ 291 (305)
T 3ocj_A 285 DLRFEDD 291 (305)
T ss_dssp EEEEECC
T ss_pred EEEEEcc
Confidence 9888754
|
| >3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A* | Back alignment and structure |
|---|
Probab=98.56 E-value=1.3e-06 Score=85.68 Aligned_cols=151 Identities=15% Similarity=0.154 Sum_probs=93.1
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhh---hhcCC-CCcceee
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTL---FKSVP-LSKKYFA 137 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~l---F~~l~-~~~~~f~ 137 (371)
.+..+|+|+|||+|..+..+. + + .| ..+++.-|+|. --... +.... ..+--|.
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~--------~-~----------~p---~~~~~~~D~~~-~~~~a~~~~~~~~l~~~v~~~ 257 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVL--------D-A----------FP---GLRGTLLERPP-VAEEARELLTGRGLADRCEIL 257 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHH--------H-H----------CT---TCEEEEEECHH-HHHHHHHHHHHTTCTTTEEEE
T ss_pred ccCcEEEEeCCCccHHHHHHH--------H-H----------CC---CCeEEEEcCHH-HHHHHHHhhhhcCcCCceEEe
Confidence 456899999999999877666 3 2 23 45778888843 11111 11111 1112233
Q ss_pred eccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 138 TGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 138 ~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
.++|. .-+|. ++|++++..+||+. |+ .+...+|+.-++-
T Consensus 258 ---~~d~~-~~~p~-~~D~v~~~~vlh~~---~d---------------------------------~~~~~~L~~~~~~ 296 (369)
T 3gwz_A 258 ---PGDFF-ETIPD-GADVYLIKHVLHDW---DD---------------------------------DDVVRILRRIATA 296 (369)
T ss_dssp ---ECCTT-TCCCS-SCSEEEEESCGGGS---CH---------------------------------HHHHHHHHHHHTT
T ss_pred ---ccCCC-CCCCC-CceEEEhhhhhccC---CH---------------------------------HHHHHHHHHHHHH
Confidence 35566 34565 89999999999973 32 1223478888899
Q ss_pred cccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEE
Q 017439 218 LVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIM 297 (371)
Q Consensus 218 L~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~ 297 (371)
|+|||++++.-.-.++... .+....+ +.-|+..| -..++.+|+++++++.| |+++++
T Consensus 297 L~pgG~l~i~e~~~~~~~~--------~~~~~~d-~~~~~~~~-------------g~~~t~~e~~~ll~~aG-f~~~~~ 353 (369)
T 3gwz_A 297 MKPDSRLLVIDNLIDERPA--------ASTLFVD-LLLLVLVG-------------GAERSESEFAALLEKSG-LRVERS 353 (369)
T ss_dssp CCTTCEEEEEEEBCCSSCC--------HHHHHHH-HHHHHHHS-------------CCCBCHHHHHHHHHTTT-EEEEEE
T ss_pred cCCCCEEEEEEeccCCCCC--------CchhHhh-HHHHhhcC-------------CccCCHHHHHHHHHHCC-CeEEEE
Confidence 9999999997755543311 1111111 11122222 12578999999999987 999888
Q ss_pred EE
Q 017439 298 NT 299 (371)
Q Consensus 298 e~ 299 (371)
..
T Consensus 354 ~~ 355 (369)
T 3gwz_A 354 LP 355 (369)
T ss_dssp EE
T ss_pred EE
Confidence 65
|
| >4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A* | Back alignment and structure |
|---|
Probab=98.55 E-value=1.1e-07 Score=94.39 Aligned_cols=145 Identities=14% Similarity=0.206 Sum_probs=90.3
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhc-CCCCcceeeeccC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKS-VPLSKKYFATGVP 141 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~-l~~~~~~f~~gvp 141 (371)
...+|+|+|||+|..+..+. + + ..+++.-|+..+-....-+. ++.....|..+.
T Consensus 107 ~~~~VLDiGcG~G~~~~~l~--------~-~---------------g~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~- 161 (416)
T 4e2x_A 107 PDPFIVEIGCNDGIMLRTIQ--------E-A---------------GVRHLGFEPSSGVAAKAREKGIRVRTDFFEKAT- 161 (416)
T ss_dssp SSCEEEEETCTTTTTHHHHH--------H-T---------------TCEEEEECCCHHHHHHHHTTTCCEECSCCSHHH-
T ss_pred CCCEEEEecCCCCHHHHHHH--------H-c---------------CCcEEEECCCHHHHHHHHHcCCCcceeeechhh-
Confidence 45799999999999877665 2 1 12566777654432222111 110011121111
Q ss_pred CCcccc-cCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc
Q 017439 142 GSFHGR-LFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP 220 (371)
Q Consensus 142 gSFy~r-LfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 220 (371)
-.. -+|++++|+++|+.+|||+.+ ...||+.-++-|+|
T Consensus 162 ---~~~l~~~~~~fD~I~~~~vl~h~~d--------------------------------------~~~~l~~~~r~Lkp 200 (416)
T 4e2x_A 162 ---ADDVRRTEGPANVIYAANTLCHIPY--------------------------------------VQSVLEGVDALLAP 200 (416)
T ss_dssp ---HHHHHHHHCCEEEEEEESCGGGCTT--------------------------------------HHHHHHHHHHHEEE
T ss_pred ---HhhcccCCCCEEEEEECChHHhcCC--------------------------------------HHHHHHHHHHHcCC
Confidence 011 146789999999999999642 23478888899999
Q ss_pred CceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhccc-CcccccCCHHHHHHHhhcCCceEEEEEEE
Q 017439 221 GGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSF-NVPMYYPFLGELMGHIKRNKNFSIEIMNT 299 (371)
Q Consensus 221 GG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f-n~P~Y~ps~eE~~~~i~~~g~F~I~~~e~ 299 (371)
||+|++..+...+ +.... .++.+ .-...+++.++++.++++.| |++..++.
T Consensus 201 gG~l~i~~~~~~~----------------------~~~~~-----~~~~~~~~~~~~~s~~~l~~ll~~aG-f~~~~~~~ 252 (416)
T 4e2x_A 201 DGVFVFEDPYLGD----------------------IVAKT-----SFDQIFDEHFFLFSATSVQGMAQRCG-FELVDVQR 252 (416)
T ss_dssp EEEEEEEEECHHH----------------------HHHHT-----CGGGCSTTCCEECCHHHHHHHHHHTT-EEEEEEEE
T ss_pred CeEEEEEeCChHH----------------------hhhhc-----chhhhhhhhhhcCCHHHHHHHHHHcC-CEEEEEEE
Confidence 9999998654321 01111 11111 23455789999999999987 99998888
Q ss_pred ee
Q 017439 300 FT 301 (371)
Q Consensus 300 ~~ 301 (371)
++
T Consensus 253 ~~ 254 (416)
T 4e2x_A 253 LP 254 (416)
T ss_dssp EC
T ss_pred cc
Confidence 64
|
| >3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A | Back alignment and structure |
|---|
Probab=98.55 E-value=1.2e-06 Score=82.29 Aligned_cols=105 Identities=16% Similarity=0.208 Sum_probs=67.9
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhc---CCCCcceeee
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKS---VPLSKKYFAT 138 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~---l~~~~~~f~~ 138 (371)
.+..+|+|+|||+|..++.+. + .+. + ..+|+..|+...--...=+. .+. +--|..
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~--------~-~~~---------~---~~~v~gvD~s~~~~~~a~~~~~~~~~-~v~~~~ 78 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLM--------P-LLP---------E---GSKYTGIDSGETLLAEARELFRLLPY-DSEFLE 78 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHT--------T-TSC---------T---TCEEEEEESCHHHHHHHHHHHHSSSS-EEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHH--------H-hCC---------C---CCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEE
Confidence 456899999999998887765 3 221 1 24677888755432222111 221 223444
Q ss_pred ccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 139 GVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 139 gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
+. +. .+-+++++|++++..++|++... ..+|+.-.+-|
T Consensus 79 ~d---~~-~~~~~~~fD~v~~~~~l~~~~~~--------------------------------------~~~l~~~~~~L 116 (284)
T 3gu3_A 79 GD---AT-EIELNDKYDIAICHAFLLHMTTP--------------------------------------ETMLQKMIHSV 116 (284)
T ss_dssp SC---TT-TCCCSSCEEEEEEESCGGGCSSH--------------------------------------HHHHHHHHHTE
T ss_pred cc---hh-hcCcCCCeeEEEECChhhcCCCH--------------------------------------HHHHHHHHHHc
Confidence 44 22 33346799999999999995332 23677777899
Q ss_pred ccCceEEEEecC
Q 017439 219 VPGGLLLLLTPT 230 (371)
Q Consensus 219 ~pGG~lvl~~~g 230 (371)
+|||++++..+.
T Consensus 117 kpgG~l~~~~~~ 128 (284)
T 3gu3_A 117 KKGGKIICFEPH 128 (284)
T ss_dssp EEEEEEEEEECC
T ss_pred CCCCEEEEEecc
Confidence 999999998765
|
| >3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A* | Back alignment and structure |
|---|
Probab=98.54 E-value=7.3e-08 Score=91.19 Aligned_cols=169 Identities=12% Similarity=0.132 Sum_probs=92.7
Q ss_pred EEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC------Ccceeeec
Q 017439 66 KIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL------SKKYFATG 139 (371)
Q Consensus 66 ~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~------~~~~f~~g 139 (371)
+|+|+|||+|..+..+... ..+|+..|+-..--...-+.++. .+--|..+
T Consensus 85 ~vLDlGcG~G~~~~~l~~~------------------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~ 140 (299)
T 3g2m_A 85 PVLELAAGMGRLTFPFLDL------------------------GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQG 140 (299)
T ss_dssp CEEEETCTTTTTHHHHHTT------------------------TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEEC
T ss_pred cEEEEeccCCHHHHHHHHc------------------------CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeC
Confidence 9999999999999887721 01344555533222222111111 11123333
Q ss_pred cCCCcccccCCCCceeEEE-ecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 140 VPGSFHGRLFPESSLHVAH-TSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~-Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
. ...+-+++++|+|+ ++.++||++ . .|...+|+.-++-|
T Consensus 141 d----~~~~~~~~~fD~v~~~~~~~~~~~---~---------------------------------~~~~~~l~~~~~~L 180 (299)
T 3g2m_A 141 D----MSAFALDKRFGTVVISSGSINELD---E---------------------------------ADRRGLYASVREHL 180 (299)
T ss_dssp B----TTBCCCSCCEEEEEECHHHHTTSC---H---------------------------------HHHHHHHHHHHHHE
T ss_pred c----hhcCCcCCCcCEEEECCcccccCC---H---------------------------------HHHHHHHHHHHHHc
Confidence 3 12233478899887 568899842 1 34556888888999
Q ss_pred ccCceEEEEecCcCCCCCCCCCCCcchHHHH-HHHHHHHHHcCCC---------------chhhhcccCcccccCCHHHH
Q 017439 219 VPGGLLLLLTPTIRDGIPMFSTPEGTNFDYL-GSCLYDLANMGLI---------------AEEKVDSFNVPMYYPFLGEL 282 (371)
Q Consensus 219 ~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l-~~al~~mv~eGli---------------~~e~~d~fn~P~Y~ps~eE~ 282 (371)
+|||+|++.+...+.......... ..|... ...+ ....... ....+..+....++.+.+|+
T Consensus 181 ~pgG~l~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el 257 (299)
T 3g2m_A 181 EPGGKFLLSLAMSEAAESEPLERK-QELPGRSGRRY--VLHVRHLPAEEIQEITIHPADETTDPFVVCTHRRRLLAPDQV 257 (299)
T ss_dssp EEEEEEEEEEECCHHHHSCCCCC----------------CCEEEEEEEEEEEEEEEESCC--CCCCEEEEEEEEECHHHH
T ss_pred CCCcEEEEEeecCccccccchhcc-ceeecCCCcEE--EEEEEEeccccEEEEEEEeccCCCCcEEEEEEEEEEeCHHHH
Confidence 999999999977643210000000 000000 0000 0000000 00111223445567899999
Q ss_pred HHHhhcCCceEEEEEEEeec
Q 017439 283 MGHIKRNKNFSIEIMNTFTH 302 (371)
Q Consensus 283 ~~~i~~~g~F~I~~~e~~~~ 302 (371)
++++++.| |+++.++.++.
T Consensus 258 ~~ll~~aG-F~v~~~~~~~~ 276 (299)
T 3g2m_A 258 VRELVRSG-FDVIAQTPFAS 276 (299)
T ss_dssp HHHHHHTT-CEEEEEEEECT
T ss_pred HHHHHHCC-CEEEEEEecCC
Confidence 99999988 99999988753
|
| >3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A* | Back alignment and structure |
|---|
Probab=98.54 E-value=5e-06 Score=81.48 Aligned_cols=155 Identities=12% Similarity=0.039 Sum_probs=94.7
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccC
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVP 141 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvp 141 (371)
....+|+|+|||+|..+..+. + + .| ..+++.-|+|. .........+ +.-+.
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~--------~-~----------~p---~~~~~~~D~~~-----~~~~a~~~~~--v~~~~ 252 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIV--------A-K----------YP---SINAINFDLPH-----VIQDAPAFSG--VEHLG 252 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHH--------H-H----------CT---TCEEEEEECHH-----HHTTCCCCTT--EEEEE
T ss_pred cCCCEEEEeCCCcCHHHHHHH--------H-h----------CC---CCEEEEEehHH-----HHHhhhhcCC--CEEEe
Confidence 345799999999999988877 3 2 33 45788888843 2222222122 22345
Q ss_pred CCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccC
Q 017439 142 GSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPG 221 (371)
Q Consensus 142 gSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 221 (371)
|+|++ -+|+. |+++++++||++ |. ++...+|+.-++-|+||
T Consensus 253 ~d~~~-~~p~~--D~v~~~~vlh~~---~~---------------------------------~~~~~~l~~~~~~L~pg 293 (368)
T 3reo_A 253 GDMFD-GVPKG--DAIFIKWICHDW---SD---------------------------------EHCLKLLKNCYAALPDH 293 (368)
T ss_dssp CCTTT-CCCCC--SEEEEESCGGGB---CH---------------------------------HHHHHHHHHHHHHSCTT
T ss_pred cCCCC-CCCCC--CEEEEechhhcC---CH---------------------------------HHHHHHHHHHHHHcCCC
Confidence 67776 46765 999999999853 32 23445788888999999
Q ss_pred ceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEee
Q 017439 222 GLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFT 301 (371)
Q Consensus 222 G~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~~ 301 (371)
|++++.-.-.++... ...........-+.-|+.- ..-..++.+|+++++++.| |++.++....
T Consensus 294 G~l~i~e~~~~~~~~----~~~~~~~~~~~d~~~~~~~------------~~g~~rt~~e~~~ll~~AG-F~~v~~~~~~ 356 (368)
T 3reo_A 294 GKVIVAEYILPPSPD----PSIATKVVIHTDALMLAYN------------PGGKERTEKEFQALAMASG-FRGFKVASCA 356 (368)
T ss_dssp CEEEEEECCCCSSCC----CCHHHHHHHHHHHHHHHHS------------SBCCCCCHHHHHHHHHHTT-CCEEEEEEEE
T ss_pred CEEEEEEeccCCCCC----CchhhhHHHhhhHHHHhhc------------CCCccCCHHHHHHHHHHCC-CeeeEEEEeC
Confidence 999987654443211 0000000111111122210 0112578999999999988 9988776553
|
| >2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=98.51 E-value=9e-07 Score=84.63 Aligned_cols=155 Identities=15% Similarity=0.076 Sum_probs=93.9
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhc-CC----CCccee
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKS-VP----LSKKYF 136 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~-l~----~~~~~f 136 (371)
.+..+|+|+|||+|..+..+. + + .| ..+++..|++ .- -...+. +. ..+--|
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~--------~-~----------~p---~~~~~~~D~~-~~-~~~a~~~~~~~~~~~~v~~ 219 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVA--------Q-H----------NP---NAEIFGVDWA-SV-LEVAKENARIQGVASRYHT 219 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHH--------H-H----------CT---TCEEEEEECH-HH-HHHHHHHHHHHTCGGGEEE
T ss_pred CCCCEEEEECCCcCHHHHHHH--------H-H----------CC---CCeEEEEecH-HH-HHHHHHHHHhcCCCcceEE
Confidence 346799999999998777665 3 2 23 4578888887 32 222222 11 111223
Q ss_pred eeccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHh
Q 017439 137 ATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQ 216 (371)
Q Consensus 137 ~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~ 216 (371)
.. +.+..--+|. .+|+++++..+|.+ |. .|...+|+.-++
T Consensus 220 ~~---~d~~~~~~~~-~~D~v~~~~~l~~~---~~---------------------------------~~~~~~l~~~~~ 259 (335)
T 2r3s_A 220 IA---GSAFEVDYGN-DYDLVLLPNFLHHF---DV---------------------------------ATCEQLLRKIKT 259 (335)
T ss_dssp EE---SCTTTSCCCS-CEEEEEEESCGGGS---CH---------------------------------HHHHHHHHHHHH
T ss_pred Ee---cccccCCCCC-CCcEEEEcchhccC---CH---------------------------------HHHHHHHHHHHH
Confidence 33 3454433444 49999999999974 31 344557888888
Q ss_pred hcccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEE
Q 017439 217 ELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEI 296 (371)
Q Consensus 217 EL~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~ 296 (371)
-|+|||++++.-...++... ...+..+...+ .+...+ ....++.+|+++++++.| |++.+
T Consensus 260 ~L~pgG~l~i~e~~~~~~~~------~~~~~~~~~~~-~~~~~~------------~~~~~t~~~~~~ll~~aG-f~~~~ 319 (335)
T 2r3s_A 260 ALAVEGKVIVFDFIPNSDRI------TPPDAAAFSLV-MLATTP------------NGDAYTFAEYESMFSNAG-FSHSQ 319 (335)
T ss_dssp HEEEEEEEEEEECCCCTTSS------CSHHHHHHHHH-HHHHSS------------SCCCCCHHHHHHHHHHTT-CSEEE
T ss_pred hCCCCcEEEEEeecCCCCcC------CchHHHHHHHH-HHeeCC------------CCCcCCHHHHHHHHHHCC-CCeee
Confidence 99999999988766543211 11222222211 111110 123679999999999987 99887
Q ss_pred EEEe
Q 017439 297 MNTF 300 (371)
Q Consensus 297 ~e~~ 300 (371)
+...
T Consensus 320 ~~~~ 323 (335)
T 2r3s_A 320 LHSL 323 (335)
T ss_dssp EECC
T ss_pred EEEC
Confidence 7654
|
| >2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A* | Back alignment and structure |
|---|
Probab=98.51 E-value=4.3e-07 Score=83.36 Aligned_cols=86 Identities=12% Similarity=0.134 Sum_probs=61.0
Q ss_pred CceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEecCc
Q 017439 152 SSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTPTI 231 (371)
Q Consensus 152 ~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~gr 231 (371)
+++|+|+|+.+||++..- ..|...+|+.-++-|+|||+|++.....
T Consensus 156 ~~fD~v~~~~~l~~~~~~----------------------------------~~~~~~~l~~~~~~LkpgG~li~~~~~~ 201 (265)
T 2i62_A 156 PPADCLLSTLCLDAACPD----------------------------------LPAYRTALRNLGSLLKPGGFLVMVDALK 201 (265)
T ss_dssp CCEEEEEEESCHHHHCSS----------------------------------HHHHHHHHHHHHTTEEEEEEEEEEEESS
T ss_pred CCccEEEEhhhhhhhcCC----------------------------------hHHHHHHHHHHHhhCCCCcEEEEEecCC
Confidence 899999999999974321 1345567888889999999999987432
Q ss_pred CCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEeec
Q 017439 232 RDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFTH 302 (371)
Q Consensus 232 ~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~~~ 302 (371)
.+. + ..| ....+.+..+.+++++++++.| |+++.++..+.
T Consensus 202 ~~~-----------~-----------~~~--------~~~~~~~~~~~~~~~~~l~~aG-f~~~~~~~~~~ 241 (265)
T 2i62_A 202 SSY-----------Y-----------MIG--------EQKFSSLPLGWETVRDAVEEAG-YTIEQFEVISQ 241 (265)
T ss_dssp CCE-----------E-----------EET--------TEEEECCCCCHHHHHHHHHHTT-CEEEEEEEECC
T ss_pred Cce-----------E-----------EcC--------CccccccccCHHHHHHHHHHCC-CEEEEEEEecc
Confidence 210 0 001 1122345668999999999987 99999987754
|
| >3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A* | Back alignment and structure |
|---|
Probab=98.50 E-value=6.2e-07 Score=82.81 Aligned_cols=105 Identities=12% Similarity=0.103 Sum_probs=68.4
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPG 142 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpg 142 (371)
+..+|+|+|||+|..+..+. + + . .+|+..|+-..-....-+.++ +--|..+.
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~--------~-~----------~-----~~v~gvD~s~~~~~~a~~~~~--~~~~~~~d-- 101 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLA--------D-S----------F-----GTVEGLELSADMLAIARRRNP--DAVLHHGD-- 101 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHT--------T-T----------S-----SEEEEEESCHHHHHHHHHHCT--TSEEEECC--
T ss_pred CCCcEEEeCCcCCHHHHHHH--------H-c----------C-----CeEEEEECCHHHHHHHHhhCC--CCEEEECC--
Confidence 45799999999999888665 2 1 1 146666764433222222222 22344444
Q ss_pred CcccccCCCCceeEEEecC-CccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccC
Q 017439 143 SFHGRLFPESSLHVAHTSN-ALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPG 221 (371)
Q Consensus 143 SFy~rLfP~~Svd~~~Ss~-alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 221 (371)
+ ..+.+++++|+++++. ++||+.. .+|+..+|+.-++-|+||
T Consensus 102 -~-~~~~~~~~fD~v~~~~~~l~~~~~-----------------------------------~~~~~~~l~~~~~~L~pg 144 (263)
T 3pfg_A 102 -M-RDFSLGRRFSAVTCMFSSIGHLAG-----------------------------------QAELDAALERFAAHVLPD 144 (263)
T ss_dssp -T-TTCCCSCCEEEEEECTTGGGGSCH-----------------------------------HHHHHHHHHHHHHTEEEE
T ss_pred -h-HHCCccCCcCEEEEcCchhhhcCC-----------------------------------HHHHHHHHHHHHHhcCCC
Confidence 2 2233378999999998 9999532 145666888889999999
Q ss_pred ceEEEEecCcC
Q 017439 222 GLLLLLTPTIR 232 (371)
Q Consensus 222 G~lvl~~~gr~ 232 (371)
|++++.....+
T Consensus 145 G~l~i~~~~~~ 155 (263)
T 3pfg_A 145 GVVVVEPWWFP 155 (263)
T ss_dssp EEEEECCCCCT
T ss_pred cEEEEEeccCh
Confidence 99999865443
|
| >2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A* | Back alignment and structure |
|---|
Probab=98.50 E-value=1.8e-06 Score=75.50 Aligned_cols=79 Identities=15% Similarity=0.115 Sum_probs=54.7
Q ss_pred CCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEecC
Q 017439 151 ESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTPT 230 (371)
Q Consensus 151 ~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~g 230 (371)
++++|+++++.++||++ . +|...+|+.-.+-|+|||++++....
T Consensus 95 ~~~~D~v~~~~~l~~~~---~---------------------------------~~~~~~l~~~~~~L~~gG~l~~~~~~ 138 (199)
T 2xvm_A 95 DRQYDFILSTVVLMFLE---A---------------------------------KTIPGLIANMQRCTKPGGYNLIVAAM 138 (199)
T ss_dssp CCCEEEEEEESCGGGSC---G---------------------------------GGHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred CCCceEEEEcchhhhCC---H---------------------------------HHHHHHHHHHHHhcCCCeEEEEEEee
Confidence 78899999999999953 1 23455788888999999998876543
Q ss_pred cCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEe
Q 017439 231 IRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTF 300 (371)
Q Consensus 231 r~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~ 300 (371)
..+..+. + .-..+..+.+|+++.++. |+++..+..
T Consensus 139 ~~~~~~~----------------------~----------~~~~~~~~~~~l~~~~~~---f~~~~~~~~ 173 (199)
T 2xvm_A 139 DTADYPC----------------------T----------VGFPFAFKEGELRRYYEG---WERVKYNED 173 (199)
T ss_dssp CCSSSCC----------------------C----------SCCSCCBCTTHHHHHTTT---SEEEEEECC
T ss_pred ccCCcCC----------------------C----------CCCCCccCHHHHHHHhcC---CeEEEeccc
Confidence 3221110 0 001235689999999985 998887644
|
| >3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A* | Back alignment and structure |
|---|
Probab=98.50 E-value=2.3e-06 Score=82.20 Aligned_cols=150 Identities=18% Similarity=0.168 Sum_probs=91.6
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhh---hhcCCC-Ccceee
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTL---FKSVPL-SKKYFA 137 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~l---F~~l~~-~~~~f~ 137 (371)
.+..+|+|+|||+|..+..+. + + .| ..++..-|+|. --... +....- .+--|
T Consensus 168 ~~~~~vlDvG~G~G~~~~~l~--------~-~----------~p---~~~~~~~D~~~-~~~~a~~~~~~~~~~~~v~~- 223 (332)
T 3i53_A 168 AALGHVVDVGGGSGGLLSALL--------T-A----------HE---DLSGTVLDLQG-PASAAHRRFLDTGLSGRAQV- 223 (332)
T ss_dssp GGGSEEEEETCTTSHHHHHHH--------H-H----------CT---TCEEEEEECHH-HHHHHHHHHHHTTCTTTEEE-
T ss_pred CCCCEEEEeCCChhHHHHHHH--------H-H----------CC---CCeEEEecCHH-HHHHHHHhhhhcCcCcCeEE-
Confidence 456899999999998777666 3 2 22 34566668843 11111 111111 11223
Q ss_pred eccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 138 TGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 138 ~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
+.++|+. -+|. ++|++++.++||.. |. .+...+|+.-++-
T Consensus 224 --~~~d~~~-~~p~-~~D~v~~~~vlh~~---~~---------------------------------~~~~~~l~~~~~~ 263 (332)
T 3i53_A 224 --VVGSFFD-PLPA-GAGGYVLSAVLHDW---DD---------------------------------LSAVAILRRCAEA 263 (332)
T ss_dssp --EECCTTS-CCCC-SCSEEEEESCGGGS---CH---------------------------------HHHHHHHHHHHHH
T ss_pred --ecCCCCC-CCCC-CCcEEEEehhhccC---CH---------------------------------HHHHHHHHHHHHh
Confidence 3456663 3465 89999999999963 32 2344578888899
Q ss_pred cccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEE
Q 017439 218 LVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIM 297 (371)
Q Consensus 218 L~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~ 297 (371)
|+|||++++.-.-.++..+ ...+++.. |+..| ...+|.+|+++++++.| |++.++
T Consensus 264 L~pgG~l~i~e~~~~~~~~------~~~~d~~~-----~~~~~-------------~~~~t~~e~~~ll~~aG-f~~~~~ 318 (332)
T 3i53_A 264 AGSGGVVLVIEAVAGDEHA------GTGMDLRM-----LTYFG-------------GKERSLAELGELAAQAG-LAVRAA 318 (332)
T ss_dssp HTTTCEEEEEECCCC---C------CHHHHHHH-----HHHHS-------------CCCCCHHHHHHHHHHTT-EEEEEE
T ss_pred cCCCCEEEEEeecCCCCCc------cHHHHHHH-----HhhCC-------------CCCCCHHHHHHHHHHCC-CEEEEE
Confidence 9999999997654443211 11222211 22111 12579999999999988 998877
Q ss_pred EEe
Q 017439 298 NTF 300 (371)
Q Consensus 298 e~~ 300 (371)
...
T Consensus 319 ~~~ 321 (332)
T 3i53_A 319 HPI 321 (332)
T ss_dssp EEC
T ss_pred EEC
Confidence 654
|
| >3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A* | Back alignment and structure |
|---|
Probab=98.49 E-value=6.7e-06 Score=80.54 Aligned_cols=153 Identities=13% Similarity=0.076 Sum_probs=95.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPG 142 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpg 142 (371)
...+|+|+|||+|..+..+. + + .| ..+++.-|+|. .........+ +.-+.|
T Consensus 201 ~~~~vlDvG~G~G~~~~~l~--------~-~----------~p---~~~~~~~D~~~-----~~~~a~~~~~--v~~~~~ 251 (364)
T 3p9c_A 201 GLGTLVDVGGGVGATVAAIA--------A-H----------YP---TIKGVNFDLPH-----VISEAPQFPG--VTHVGG 251 (364)
T ss_dssp TCSEEEEETCTTSHHHHHHH--------H-H----------CT---TCEEEEEECHH-----HHTTCCCCTT--EEEEEC
T ss_pred CCCEEEEeCCCCCHHHHHHH--------H-H----------CC---CCeEEEecCHH-----HHHhhhhcCC--eEEEeC
Confidence 45899999999999888777 3 2 33 45788888853 2222222122 233456
Q ss_pred CcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCc
Q 017439 143 SFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGG 222 (371)
Q Consensus 143 SFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 222 (371)
+|++ =+|+. |+++++++||.+ |. +|...+|+.-++-|+|||
T Consensus 252 D~~~-~~p~~--D~v~~~~vlh~~---~d---------------------------------~~~~~~L~~~~~~L~pgG 292 (364)
T 3p9c_A 252 DMFK-EVPSG--DTILMKWILHDW---SD---------------------------------QHCATLLKNCYDALPAHG 292 (364)
T ss_dssp CTTT-CCCCC--SEEEEESCGGGS---CH---------------------------------HHHHHHHHHHHHHSCTTC
T ss_pred CcCC-CCCCC--CEEEehHHhccC---CH---------------------------------HHHHHHHHHHHHHcCCCC
Confidence 7777 46765 999999999842 32 344557888889999999
Q ss_pred eEEEEecCcCCCCCCCCCCCcchHH-HHHHHHHHHHH-cCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEe
Q 017439 223 LLLLLTPTIRDGIPMFSTPEGTNFD-YLGSCLYDLAN-MGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTF 300 (371)
Q Consensus 223 ~lvl~~~gr~~~~~~~~~~~~~~~~-~l~~al~~mv~-eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~ 300 (371)
++++.=.-.++... ....+. ....-+.-|+. .| -..++.+|+++++++.| |++.++...
T Consensus 293 ~l~i~e~~~~~~~~-----~~~~~~~~~~~d~~m~~~~~~-------------g~~rt~~e~~~ll~~AG-F~~v~~~~~ 353 (364)
T 3p9c_A 293 KVVLVQCILPVNPE-----ANPSSQGVFHVDMIMLAHNPG-------------GRERYEREFQALARGAG-FTGVKSTYI 353 (364)
T ss_dssp EEEEEECCBCSSCC-----SSHHHHHHHHHHHHHHHHCSS-------------CCCCBHHHHHHHHHHTT-CCEEEEEEE
T ss_pred EEEEEEeccCCCCC-----cchhhhhHHHhHHHHHhcccC-------------CccCCHHHHHHHHHHCC-CceEEEEEc
Confidence 99987655443211 011111 11111222211 11 12578999999999988 998887765
Q ss_pred ec
Q 017439 301 TH 302 (371)
Q Consensus 301 ~~ 302 (371)
..
T Consensus 354 ~~ 355 (364)
T 3p9c_A 354 YA 355 (364)
T ss_dssp ET
T ss_pred CC
Confidence 43
|
| >2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca} | Back alignment and structure |
|---|
Probab=98.49 E-value=2.2e-06 Score=80.88 Aligned_cols=91 Identities=13% Similarity=0.058 Sum_probs=60.2
Q ss_pred cCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEE
Q 017439 148 LFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLL 227 (371)
Q Consensus 148 LfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~ 227 (371)
.+|.+++|+++++.+|||+..- |...+|+.-++-|+|||+|++.
T Consensus 152 ~~d~~~~d~v~~~~vlh~~~d~------------------------------------~~~~~l~~~~~~L~pGG~l~i~ 195 (274)
T 2qe6_A 152 MIDFSRPAAIMLVGMLHYLSPD------------------------------------VVDRVVGAYRDALAPGSYLFMT 195 (274)
T ss_dssp HCCTTSCCEEEETTTGGGSCTT------------------------------------THHHHHHHHHHHSCTTCEEEEE
T ss_pred cCCCCCCEEEEEechhhhCCcH------------------------------------HHHHHHHHHHHhCCCCcEEEEE
Confidence 3565689999999999996542 2234677778899999999999
Q ss_pred ecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEe
Q 017439 228 TPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTF 300 (371)
Q Consensus 228 ~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~ 300 (371)
....+. + ..+..+...+. . ...|+++++.+|+++.+. | |++......
T Consensus 196 ~~~~~~--~-------~~~~~~~~~~~---~-----------~~~~~~~~s~~ei~~~l~--G-~~l~~~g~~ 242 (274)
T 2qe6_A 196 SLVDTG--L-------PAQQKLARITR---E-----------NLGEGWARTPEEIERQFG--D-FELVEPGVV 242 (274)
T ss_dssp EEBCSS--C-------HHHHHHHHHHH---H-----------HHSCCCCBCHHHHHHTTT--T-CEECTTCSE
T ss_pred EecCcc--h-------HHHHHHHHHHH---h-----------cCCCCccCCHHHHHHHhC--C-CeEccCcEe
Confidence 976532 1 01122222221 1 112677899999999993 4 887664433
|
| >3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=98.48 E-value=1.2e-06 Score=75.23 Aligned_cols=133 Identities=11% Similarity=0.065 Sum_probs=86.5
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccC
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVP 141 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvp 141 (371)
....+|+|+|||+|..+..+. + +. . +++.-|+...-....-+..+ +-.|..+.
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~--------~-~~--------------~-~v~~vD~s~~~~~~a~~~~~--~v~~~~~d- 68 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLL--------E-FA--------------T-KLYCIDINVIALKEVKEKFD--SVITLSDP- 68 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHH--------T-TE--------------E-EEEEECSCHHHHHHHHHHCT--TSEEESSG-
T ss_pred CCCCeEEEECCCCCHHHHHHH--------h-hc--------------C-eEEEEeCCHHHHHHHHHhCC--CcEEEeCC-
Confidence 345799999999999988776 2 11 2 56666664433222222211 12233332
Q ss_pred CCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccC
Q 017439 142 GSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPG 221 (371)
Q Consensus 142 gSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 221 (371)
.-+|++++|+++++.++||+.. ...+|+.-.+-|+||
T Consensus 69 -----~~~~~~~~D~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~L~pg 105 (170)
T 3i9f_A 69 -----KEIPDNSVDFILFANSFHDMDD--------------------------------------KQHVISEVKRILKDD 105 (170)
T ss_dssp -----GGSCTTCEEEEEEESCSTTCSC--------------------------------------HHHHHHHHHHHEEEE
T ss_pred -----CCCCCCceEEEEEccchhcccC--------------------------------------HHHHHHHHHHhcCCC
Confidence 2357899999999999999632 123677777899999
Q ss_pred ceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEe
Q 017439 222 GLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTF 300 (371)
Q Consensus 222 G~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~ 300 (371)
|++++......+.... . ......+.+|+++.++ | |++......
T Consensus 106 G~l~~~~~~~~~~~~~----~-----------------------------~~~~~~~~~~~~~~l~--G-f~~~~~~~~ 148 (170)
T 3i9f_A 106 GRVIIIDWRKENTGIG----P-----------------------------PLSIRMDEKDYMGWFS--N-FVVEKRFNP 148 (170)
T ss_dssp EEEEEEEECSSCCSSS----S-----------------------------CGGGCCCHHHHHHHTT--T-EEEEEEECS
T ss_pred CEEEEEEcCccccccC----c-----------------------------hHhhhcCHHHHHHHHh--C-cEEEEccCC
Confidence 9999997665443110 0 0012368999999999 5 998887765
|
| >4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A | Back alignment and structure |
|---|
Probab=98.47 E-value=8.1e-07 Score=87.58 Aligned_cols=111 Identities=19% Similarity=0.198 Sum_probs=69.2
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhc-----------CCC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKS-----------VPL 131 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~-----------l~~ 131 (371)
...+|+|+|||+|..++.+. + .+. | ..+|+..|+-..--...=+. +..
T Consensus 83 ~~~~VLDlGcG~G~~~~~la--------~-~~~---------~---~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~ 141 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLAS--------K-LVG---------E---HGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSR 141 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHH--------H-HHT---------T---TCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTC
T ss_pred CCCEEEEecCccCHHHHHHH--------H-HhC---------C---CCEEEEEECCHHHHHHHHHHHHHhhhhcccccCC
Confidence 45799999999999988776 2 221 1 23567777644322211111 111
Q ss_pred CcceeeeccCCCcccc---cCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHH
Q 017439 132 SKKYFATGVPGSFHGR---LFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIE 208 (371)
Q Consensus 132 ~~~~f~~gvpgSFy~r---LfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~ 208 (371)
.+--|..+.--.+-.. -+|++++|+|+|+.++||+.+ +.
T Consensus 142 ~~v~~~~~d~~~l~~~~~~~~~~~~fD~V~~~~~l~~~~d--------------------------------------~~ 183 (383)
T 4fsd_A 142 SNVRFLKGFIENLATAEPEGVPDSSVDIVISNCVCNLSTN--------------------------------------KL 183 (383)
T ss_dssp CCEEEEESCTTCGGGCBSCCCCTTCEEEEEEESCGGGCSC--------------------------------------HH
T ss_pred CceEEEEccHHHhhhcccCCCCCCCEEEEEEccchhcCCC--------------------------------------HH
Confidence 2223444432111111 468899999999999999543 12
Q ss_pred HHHHHHHhhcccCceEEEEecCcC
Q 017439 209 SFLNARAQELVPGGLLLLLTPTIR 232 (371)
Q Consensus 209 ~FL~~Ra~EL~pGG~lvl~~~gr~ 232 (371)
.+|+.-.+-|+|||+|++.....+
T Consensus 184 ~~l~~~~r~LkpgG~l~i~~~~~~ 207 (383)
T 4fsd_A 184 ALFKEIHRVLRDGGELYFSDVYAD 207 (383)
T ss_dssp HHHHHHHHHEEEEEEEEEEEEEES
T ss_pred HHHHHHHHHcCCCCEEEEEEeccc
Confidence 367777889999999999876554
|
| >1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43 | Back alignment and structure |
|---|
Probab=98.47 E-value=5.1e-07 Score=81.62 Aligned_cols=106 Identities=15% Similarity=0.155 Sum_probs=65.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCC--cceeeecc
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLS--KKYFATGV 140 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~--~~~f~~gv 140 (371)
...+|+|+|||+|..+..+. + + ..+++..|...+-....=+.++.. +--|..+
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~--------~-~---------------~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~- 91 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLC--------P-K---------------FKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQ- 91 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHG--------G-G---------------SSEEEEECSCHHHHHHHHHHHHHTTCCCEEECC-
T ss_pred CCCeEEEeCCCCCHHHHHHH--------H-C---------------CCcEEEEECCHHHHHHHHHHHhhcCCCeEEEec-
Confidence 45799999999999988776 2 1 113555565443322221111100 1122222
Q ss_pred CCCcccccCCCCceeEEEecC-CccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcc
Q 017439 141 PGSFHGRLFPESSLHVAHTSN-ALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELV 219 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~-alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 219 (371)
.+..-.+| +++|+++++. ++||+.. ..|...+|+.-++-|+
T Consensus 92 --d~~~~~~~-~~fD~v~~~~~~l~~~~~-----------------------------------~~~~~~~l~~~~~~L~ 133 (246)
T 1y8c_A 92 --DISNLNIN-RKFDLITCCLDSTNYIID-----------------------------------SDDLKKYFKAVSNHLK 133 (246)
T ss_dssp --CGGGCCCS-CCEEEEEECTTGGGGCCS-----------------------------------HHHHHHHHHHHHTTEE
T ss_pred --ccccCCcc-CCceEEEEcCccccccCC-----------------------------------HHHHHHHHHHHHHhcC
Confidence 22222234 8899999998 9999532 1345668888899999
Q ss_pred cCceEEEEecCc
Q 017439 220 PGGLLLLLTPTI 231 (371)
Q Consensus 220 pGG~lvl~~~gr 231 (371)
|||++++.+...
T Consensus 134 pgG~l~~~~~~~ 145 (246)
T 1y8c_A 134 EGGVFIFDINSY 145 (246)
T ss_dssp EEEEEEEEEECH
T ss_pred CCcEEEEEecCH
Confidence 999999987653
|
| >2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.46 E-value=1.2e-05 Score=76.94 Aligned_cols=150 Identities=14% Similarity=0.163 Sum_probs=92.3
Q ss_pred eEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC---CcceeeeccC
Q 017439 65 FKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL---SKKYFATGVP 141 (371)
Q Consensus 65 ~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~---~~~~f~~gvp 141 (371)
.+|+|+|||+|..+..+. + + .| ..+++..|+ ..--...=+.+.. ..+ +.-+.
T Consensus 169 ~~vlDvG~G~G~~~~~l~--------~-~----------~p---~~~~~~~D~-~~~~~~a~~~~~~~~~~~~--v~~~~ 223 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAIL--------Q-A----------EP---SARGVMLDR-EGSLGVARDNLSSLLAGER--VSLVG 223 (334)
T ss_dssp CEEEEETCTTCHHHHHHH--------H-H----------CT---TCEEEEEEC-TTCTHHHHHHTHHHHHTTS--EEEEE
T ss_pred CEEEEeCCCchHHHHHHH--------H-H----------CC---CCEEEEeCc-HHHHHHHHHHHhhcCCCCc--EEEec
Confidence 899999999998877666 3 2 23 457889998 3332222122211 111 22234
Q ss_pred CCcccccCCCCceeEEEecCCcc-ccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc
Q 017439 142 GSFHGRLFPESSLHVAHTSNALP-WLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP 220 (371)
Q Consensus 142 gSFy~rLfP~~Svd~~~Ss~alH-WLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 220 (371)
|.|.+. +| +++|++++...+| | |. .+...+|+.-++-|+|
T Consensus 224 ~d~~~~-~~-~~~D~v~~~~vl~~~----~~---------------------------------~~~~~~l~~~~~~L~p 264 (334)
T 2ip2_A 224 GDMLQE-VP-SNGDIYLLSRIIGDL----DE---------------------------------AASLRLLGNCREAMAG 264 (334)
T ss_dssp SCTTTC-CC-SSCSEEEEESCGGGC----CH---------------------------------HHHHHHHHHHHHHSCT
T ss_pred CCCCCC-CC-CCCCEEEEchhccCC----CH---------------------------------HHHHHHHHHHHHhcCC
Confidence 566663 55 7899999999998 6 32 2234578888889999
Q ss_pred CceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEe
Q 017439 221 GGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTF 300 (371)
Q Consensus 221 GG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~ 300 (371)
||++++.-...++... ..+..+.+. .-|...+ -..++.+|+++++++.| |++.++...
T Consensus 265 gG~l~i~e~~~~~~~~-------~~~~~~~~~-~~~~~~~-------------~~~~t~~e~~~ll~~aG-f~~~~~~~~ 322 (334)
T 2ip2_A 265 DGRVVVIERTISASEP-------SPMSVLWDV-HLFMACA-------------GRHRTTEEVVDLLGRGG-FAVERIVDL 322 (334)
T ss_dssp TCEEEEEECCBCSSSC-------CHHHHHHHH-HHHHHHS-------------CCCCBHHHHHHHHHHTT-EEEEEEEEE
T ss_pred CCEEEEEEeccCCCCC-------cchhHHhhh-HhHhhCC-------------CcCCCHHHHHHHHHHCC-CceeEEEEC
Confidence 9999998765543211 011111111 1111111 12468999999999987 998877654
|
| >2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A | Back alignment and structure |
|---|
Probab=98.43 E-value=8.9e-07 Score=78.25 Aligned_cols=142 Identities=17% Similarity=0.086 Sum_probs=88.0
Q ss_pred EEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC--CcceeeeccCCC
Q 017439 66 KIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL--SKKYFATGVPGS 143 (371)
Q Consensus 66 ~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~--~~~~f~~gvpgS 143 (371)
+|+|+|||+|..+..+. + . ..+++..|....--...-+.+.. .+--|..+ .
T Consensus 32 ~vLdiGcG~G~~~~~l~--------~--~--------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~---d 84 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLA--------S--L--------------GYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQS---N 84 (202)
T ss_dssp EEEECCCSCTHHHHHHH--------T--T--------------TCEEEEECSSHHHHHHHHHHHHHHTCCEEEECC---B
T ss_pred CEEEECCCCCHhHHHHH--------h--C--------------CCeEEEEECCHHHHHHHHHHHHhcCCceEEEEc---C
Confidence 99999999999987766 2 0 11455666543322221111110 01122222 2
Q ss_pred cccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCce
Q 017439 144 FHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGL 223 (371)
Q Consensus 144 Fy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~ 223 (371)
+..--+|++++|+++++. .|| +. .|...+|+.-.+-|+|||+
T Consensus 85 ~~~~~~~~~~fD~v~~~~-~~~----~~---------------------------------~~~~~~l~~~~~~L~pgG~ 126 (202)
T 2kw5_A 85 LADFDIVADAWEGIVSIF-CHL----PS---------------------------------SLRQQLYPKVYQGLKPGGV 126 (202)
T ss_dssp TTTBSCCTTTCSEEEEEC-CCC----CH---------------------------------HHHHHHHHHHHTTCCSSEE
T ss_pred hhhcCCCcCCccEEEEEh-hcC----CH---------------------------------HHHHHHHHHHHHhcCCCcE
Confidence 222235788999999964 455 21 3455678888899999999
Q ss_pred EEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEeecC
Q 017439 224 LLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFTHP 303 (371)
Q Consensus 224 lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~~~p 303 (371)
+++......+... ..| ...-+.++.+.+|+++.++ | |+++.++..+.+
T Consensus 127 l~~~~~~~~~~~~---------------------~~~--------~~~~~~~~~~~~~l~~~l~--G-f~v~~~~~~~~~ 174 (202)
T 2kw5_A 127 FILEGFAPEQLQY---------------------NTG--------GPKDLDLLPKLETLQSELP--S-LNWLIANNLERN 174 (202)
T ss_dssp EEEEEECTTTGGG---------------------TSC--------CSSSGGGCCCHHHHHHHCS--S-SCEEEEEEEEEE
T ss_pred EEEEEeccccccC---------------------CCC--------CCCcceeecCHHHHHHHhc--C-ceEEEEEEEEee
Confidence 9999877543210 001 1123567899999999999 5 999999887554
Q ss_pred c
Q 017439 304 L 304 (371)
Q Consensus 304 ~ 304 (371)
.
T Consensus 175 ~ 175 (202)
T 2kw5_A 175 L 175 (202)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A* | Back alignment and structure |
|---|
Probab=98.42 E-value=1.3e-06 Score=78.04 Aligned_cols=107 Identities=12% Similarity=0.127 Sum_probs=70.1
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCC-cceeeecc
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLS-KKYFATGV 140 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~-~~~f~~gv 140 (371)
....+|+|+|||+|..+..+. + + -.+++..|.-..-....-+.+... +--|..+.
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~--------~-~---------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d 105 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLA--------P-H---------------CKRLTVIDVMPRAIGRACQRTKRWSHISWAATD 105 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHG--------G-G---------------EEEEEEEESCHHHHHHHHHHTTTCSSEEEEECC
T ss_pred CCCCcEEEEcCCCCHHHHHHH--------H-c---------------CCEEEEEECCHHHHHHHHHhcccCCCeEEEEcc
Confidence 456899999999999888765 2 1 124556665443333332223221 12344443
Q ss_pred CCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc
Q 017439 141 PGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP 220 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 220 (371)
...+.|++++|+++++.++||+... .++..+|+.-++-|+|
T Consensus 106 ----~~~~~~~~~fD~v~~~~~l~~~~~~-----------------------------------~~~~~~l~~~~~~L~p 146 (216)
T 3ofk_A 106 ----ILQFSTAELFDLIVVAEVLYYLEDM-----------------------------------TQMRTAIDNMVKMLAP 146 (216)
T ss_dssp ----TTTCCCSCCEEEEEEESCGGGSSSH-----------------------------------HHHHHHHHHHHHTEEE
T ss_pred ----hhhCCCCCCccEEEEccHHHhCCCH-----------------------------------HHHHHHHHHHHHHcCC
Confidence 2333478999999999999996541 2344578888899999
Q ss_pred CceEEEEecCc
Q 017439 221 GGLLLLLTPTI 231 (371)
Q Consensus 221 GG~lvl~~~gr 231 (371)
||++++.....
T Consensus 147 gG~l~~~~~~~ 157 (216)
T 3ofk_A 147 GGHLVFGSARD 157 (216)
T ss_dssp EEEEEEEEECH
T ss_pred CCEEEEEecCC
Confidence 99999987543
|
| >2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A | Back alignment and structure |
|---|
Probab=98.41 E-value=2.7e-06 Score=73.78 Aligned_cols=118 Identities=16% Similarity=0.115 Sum_probs=77.2
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPG 142 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpg 142 (371)
..-+|+|+||+... +-+-...++..++ +... .+++...|...-+|
T Consensus 12 ~g~~vL~~~~g~v~--vD~s~~ml~~a~~-~~~~------------~~~~~~~d~~~~~~-------------------- 56 (176)
T 2ld4_A 12 AGQFVAVVWDKSSP--VEALKGLVDKLQA-LTGN------------EGRVSVENIKQLLQ-------------------- 56 (176)
T ss_dssp TTSEEEEEECTTSC--HHHHHHHHHHHHH-HTTT------------TSEEEEEEGGGGGG--------------------
T ss_pred CCCEEEEecCCcee--eeCCHHHHHHHHH-hccc------------CcEEEEechhcCcc--------------------
Confidence 35789999998753 5555666666666 4321 23444444321110
Q ss_pred CcccccCCCCceeEEEecCCcccc-CCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccC
Q 017439 143 SFHGRLFPESSLHVAHTSNALPWL-SKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPG 221 (371)
Q Consensus 143 SFy~rLfP~~Svd~~~Ss~alHWL-S~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 221 (371)
+-+|++++|+++|+.++||+ ... ..+|+.-++-|+||
T Consensus 57 ----~~~~~~~fD~V~~~~~l~~~~~~~--------------------------------------~~~l~~~~r~Lkpg 94 (176)
T 2ld4_A 57 ----SAHKESSFDIILSGLVPGSTTLHS--------------------------------------AEILAEIARILRPG 94 (176)
T ss_dssp ----GCCCSSCEEEEEECCSTTCCCCCC--------------------------------------HHHHHHHHHHEEEE
T ss_pred ----ccCCCCCEeEEEECChhhhcccCH--------------------------------------HHHHHHHHHHCCCC
Confidence 01378899999999999997 221 22677778899999
Q ss_pred ceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEE
Q 017439 222 GLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIE 295 (371)
Q Consensus 222 G~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~ 295 (371)
|++++..+.... . + -+.|.++.+|+.+.+++.| | |+
T Consensus 95 G~l~~~~~~~~~--------~-----------------~-----------~~~~~~~~~~~~~~l~~aG-f-i~ 130 (176)
T 2ld4_A 95 GCLFLKEPVETA--------V-----------------D-----------NNSKVKTASKLCSALTLSG-L-VE 130 (176)
T ss_dssp EEEEEEEEEESS--------S-----------------C-----------SSSSSCCHHHHHHHHHHTT-C-EE
T ss_pred EEEEEEcccccc--------c-----------------c-----------cccccCCHHHHHHHHHHCC-C-cE
Confidence 999995321110 0 0 0666788999999999987 8 76
|
| >3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=98.40 E-value=2.5e-06 Score=77.76 Aligned_cols=94 Identities=12% Similarity=-0.092 Sum_probs=56.9
Q ss_pred ceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEecCcC
Q 017439 153 SLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTPTIR 232 (371)
Q Consensus 153 Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~gr~ 232 (371)
++|+++++.++||+ |. .|...+|+.-.+-|+|||++++.-.+..
T Consensus 124 ~~d~v~~~~~~~~~---~~---------------------------------~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 167 (245)
T 3ggd_A 124 GDANIYMRTGFHHI---PV---------------------------------EKRELLGQSLRILLGKQGAMYLIELGTG 167 (245)
T ss_dssp CSCEEEEESSSTTS---CG---------------------------------GGHHHHHHHHHHHHTTTCEEEEEEECTT
T ss_pred CccEEEEcchhhcC---CH---------------------------------HHHHHHHHHHHHHcCCCCEEEEEeCCcc
Confidence 48999999999995 32 3445578888899999999888876654
Q ss_pred CCCCCCCCCCcchHHHHHHHHHHHHHcCCCchh---hhcccCcccccCCHHHHHHHhhcCCceEEEEEEEee
Q 017439 233 DGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEE---KVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFT 301 (371)
Q Consensus 233 ~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e---~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~~ 301 (371)
+.. .+..+... ..| .... .+..-..|. ..+.+|+++.+ .| |++......+
T Consensus 168 ~~~---------~~~~~~~~-----~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~--aG-f~~~~~~~~~ 220 (245)
T 3ggd_A 168 CID---------FFNSLLEK-----YGQ-LPYELLLVMEHGIRPG-IFTAEDIELYF--PD-FEILSQGEGL 220 (245)
T ss_dssp HHH---------HHHHHHHH-----HSS-CCHHHHHHHTTTCCCC-CCCHHHHHHHC--TT-EEEEEEECCB
T ss_pred ccH---------HHHHHHhC-----CCC-CchhhhhccccCCCCC-ccCHHHHHHHh--CC-CEEEeccccc
Confidence 320 11111110 011 1110 011112233 46899999999 44 9998777654
|
| >3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A | Back alignment and structure |
|---|
Probab=98.38 E-value=5e-06 Score=74.44 Aligned_cols=151 Identities=13% Similarity=0.064 Sum_probs=87.1
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCC--------cce
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLS--------KKY 135 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~--------~~~ 135 (371)
..+|+|+|||+|..+..+. + + .| ..+++..|+...--...=+.+... +--
T Consensus 30 ~~~vLDiGcG~G~~~~~l~--------~-~----------~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~ 87 (219)
T 3jwg_A 30 AKKVIDLGCGEGNLLSLLL--------K-D----------KS---FEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRIS 87 (219)
T ss_dssp CCEEEEETCTTCHHHHHHH--------T-S----------TT---CCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEE
T ss_pred CCEEEEecCCCCHHHHHHH--------h-c----------CC---CCEEEEEECCHHHHHHHHHHHHhhccccccCcceE
Confidence 4699999999999888776 2 1 12 246777776554333322222210 122
Q ss_pred eeeccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHH
Q 017439 136 FATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARA 215 (371)
Q Consensus 136 f~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra 215 (371)
|..+. +...-++++++|+|+++.++||+ |. .++..+|+.-+
T Consensus 88 ~~~~d---~~~~~~~~~~fD~V~~~~~l~~~---~~---------------------------------~~~~~~l~~~~ 128 (219)
T 3jwg_A 88 LFQSS---LVYRDKRFSGYDAATVIEVIEHL---DE---------------------------------NRLQAFEKVLF 128 (219)
T ss_dssp EEECC---SSSCCGGGTTCSEEEEESCGGGC---CH---------------------------------HHHHHHHHHHH
T ss_pred EEeCc---ccccccccCCCCEEEEHHHHHhC---CH---------------------------------HHHHHHHHHHH
Confidence 33332 22333467899999999999996 32 24456888888
Q ss_pred hhcccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHH----HHhhcCCc
Q 017439 216 QELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELM----GHIKRNKN 291 (371)
Q Consensus 216 ~EL~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~----~~i~~~g~ 291 (371)
+-|+|||.++.+.....+... .. +. .+... ..-..+..+.+|++ .++++.|
T Consensus 129 ~~LkpgG~~i~~~~~~~~~~~-~~-------------~~----~~~~~------~~~~~~~~~~~~l~~~~~~l~~~~G- 183 (219)
T 3jwg_A 129 EFTRPQTVIVSTPNKEYNFHY-GN-------------LF----EGNLR------HRDHRFEWTRKEFQTWAVKVAEKYG- 183 (219)
T ss_dssp TTTCCSEEEEEEEBGGGGGCC-CC-------------T---------G------GGCCTTSBCHHHHHHHHHHHHHHHT-
T ss_pred HhhCCCEEEEEccchhhhhhh-cc-------------cC----ccccc------ccCceeeecHHHHHHHHHHHHHHCC-
Confidence 999999966555432221110 00 00 00000 11123456899999 6677766
Q ss_pred eEEEEEEEe
Q 017439 292 FSIEIMNTF 300 (371)
Q Consensus 292 F~I~~~e~~ 300 (371)
|+++....-
T Consensus 184 f~v~~~~~g 192 (219)
T 3jwg_A 184 YSVRFLQIG 192 (219)
T ss_dssp EEEEEEEES
T ss_pred cEEEEEecC
Confidence 988776543
|
| >3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A* | Back alignment and structure |
|---|
Probab=98.37 E-value=5.9e-06 Score=78.59 Aligned_cols=159 Identities=16% Similarity=0.178 Sum_probs=88.3
Q ss_pred CCceEEeeecCCC--CcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchh---hhhhcCCCCccee
Q 017439 62 SSTFKIADLGCST--GPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFN---TLFKSVPLSKKYF 136 (371)
Q Consensus 62 ~~~~~IaDlGCs~--G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn---~lF~~l~~~~~~f 136 (371)
...-+|+|+|||. |.|+..+.+.+ .| .-+|+..|.-..--. .++...+..+--|
T Consensus 77 ~g~~q~LDLGcG~pT~~~~~~la~~~------------------~P---~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~ 135 (277)
T 3giw_A 77 AGIRQFLDIGTGIPTSPNLHEIAQSV------------------AP---ESRVVYVDNDPIVLTLSQGLLASTPEGRTAY 135 (277)
T ss_dssp SCCCEEEEESCCSCCSSCHHHHHHHH------------------CT---TCEEEEEECCHHHHHTTHHHHCCCSSSEEEE
T ss_pred cCCCEEEEeCCCCCcccHHHHHHHHH------------------CC---CCEEEEEeCChHHHHHHHHHhccCCCCcEEE
Confidence 3567999999998 77887766321 12 335566555322111 1111111112235
Q ss_pred eeccCCCcccccC-C--CCcee-----EEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHH
Q 017439 137 ATGVPGSFHGRLF-P--ESSLH-----VAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIE 208 (371)
Q Consensus 137 ~~gvpgSFy~rLf-P--~~Svd-----~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~ 208 (371)
+.+.-...-.-|- | .+++| .++|+.+||||..- +|..
T Consensus 136 v~aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~-----------------------------------~~p~ 180 (277)
T 3giw_A 136 VEADMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDE-----------------------------------DDAV 180 (277)
T ss_dssp EECCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGG-----------------------------------GCHH
T ss_pred EEecccChhhhhcccccccccCcCCcchHHhhhhHhcCCch-----------------------------------hhHH
Confidence 5554222210000 1 23444 58899999996441 1223
Q ss_pred HHHHHHHhhcccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhc
Q 017439 209 SFLNARAQELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKR 288 (371)
Q Consensus 209 ~FL~~Ra~EL~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~ 288 (371)
..|+.-.+-|+|||+|++...+.+.. + ...+.+.+.++ .. ..|+.++|.+|+.+.+.
T Consensus 181 ~~l~~l~~~L~PGG~Lvls~~~~d~~-p-------~~~~~~~~~~~---~~-----------g~p~~~rs~~ei~~~f~- 237 (277)
T 3giw_A 181 GIVRRLLEPLPSGSYLAMSIGTAEFA-P-------QEVGRVAREYA---AR-----------NMPMRLRTHAEAEEFFE- 237 (277)
T ss_dssp HHHHHHHTTSCTTCEEEEEEECCTTS-H-------HHHHHHHHHHH---HT-----------TCCCCCCCHHHHHHTTT-
T ss_pred HHHHHHHHhCCCCcEEEEEeccCCCC-H-------HHHHHHHHHHH---hc-----------CCCCccCCHHHHHHHhC-
Confidence 35666778999999999999876521 1 01122222222 22 23788999999999995
Q ss_pred CCceEEEEEEEee
Q 017439 289 NKNFSIEIMNTFT 301 (371)
Q Consensus 289 ~g~F~I~~~e~~~ 301 (371)
+|++..--..+
T Consensus 238 --GlelvePG~v~ 248 (277)
T 3giw_A 238 --GLELVEPGIVQ 248 (277)
T ss_dssp --TSEECTTCSEE
T ss_pred --CCcccCCcEee
Confidence 49876554443
|
| >3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=98.36 E-value=1.8e-06 Score=74.84 Aligned_cols=129 Identities=16% Similarity=0.153 Sum_probs=81.0
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPG 142 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpg 142 (371)
...+|+|+|||+|..+..+. + . ..+++..|.-..-....=+.++. --+..+
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~--------~-~---------------~~~v~~~D~~~~~~~~a~~~~~~--~~~~~~--- 96 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLS--------K-Q---------------GHDVLGTDLDPILIDYAKQDFPE--ARWVVG--- 96 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHH--------H-T---------------TCEEEEEESCHHHHHHHHHHCTT--SEEEEC---
T ss_pred CCCeEEEECCCCCHHHHHHH--------H-C---------------CCcEEEEcCCHHHHHHHHHhCCC--CcEEEc---
Confidence 34699999999999888766 2 1 01355555443322222122211 122222
Q ss_pred CcccccCCCCceeEEEec-CCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccC
Q 017439 143 SFHGRLFPESSLHVAHTS-NALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPG 221 (371)
Q Consensus 143 SFy~rLfP~~Svd~~~Ss-~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 221 (371)
.+..--+|++++|+++++ ..+|+++. .+...+|+.-.+-|+||
T Consensus 97 d~~~~~~~~~~~D~i~~~~~~~~~~~~------------------------------------~~~~~~l~~~~~~l~~~ 140 (195)
T 3cgg_A 97 DLSVDQISETDFDLIVSAGNVMGFLAE------------------------------------DGREPALANIHRALGAD 140 (195)
T ss_dssp CTTTSCCCCCCEEEEEECCCCGGGSCH------------------------------------HHHHHHHHHHHHHEEEE
T ss_pred ccccCCCCCCceeEEEECCcHHhhcCh------------------------------------HHHHHHHHHHHHHhCCC
Confidence 222223577899999998 77887421 23455788888999999
Q ss_pred ceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEe
Q 017439 222 GLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTF 300 (371)
Q Consensus 222 G~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~ 300 (371)
|++++.+.... ..+.+++...+++.| |+++.....
T Consensus 141 G~l~~~~~~~~-------------------------------------------~~~~~~~~~~l~~~G-f~~~~~~~~ 175 (195)
T 3cgg_A 141 GRAVIGFGAGR-------------------------------------------GWVFGDFLEVAERVG-LELENAFES 175 (195)
T ss_dssp EEEEEEEETTS-------------------------------------------SCCHHHHHHHHHHHT-EEEEEEESS
T ss_pred CEEEEEeCCCC-------------------------------------------CcCHHHHHHHHHHcC-CEEeeeecc
Confidence 99999764321 146788888888876 888777543
|
| >1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A* | Back alignment and structure |
|---|
Probab=98.36 E-value=2.8e-06 Score=82.60 Aligned_cols=156 Identities=21% Similarity=0.201 Sum_probs=91.4
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CCC-cceee
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PLS-KKYFA 137 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~~-~~~f~ 137 (371)
....+|+|+|||+|..+..+. + + .| ..+++..|+ ..--...=+.+ ... +--|.
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~--------~-~----------~~---~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~ 237 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIA--------L-R----------AP---HLRGTLVEL-AGPAERARRRFADAGLADRVTVA 237 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHH--------H-H----------CT---TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHH--------H-H----------CC---CCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEE
Confidence 346799999999998877766 3 2 22 457888888 32211111111 111 22233
Q ss_pred eccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 138 TGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 138 ~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
.+.|.+ -+|.+ +|+++++..+|++ |. .+...+|+.-.+-
T Consensus 238 ---~~d~~~-~~~~~-~D~v~~~~vl~~~---~~---------------------------------~~~~~~l~~~~~~ 276 (374)
T 1qzz_A 238 ---EGDFFK-PLPVT-ADVVLLSFVLLNW---SD---------------------------------EDALTILRGCVRA 276 (374)
T ss_dssp ---ECCTTS-CCSCC-EEEEEEESCGGGS---CH---------------------------------HHHHHHHHHHHHH
T ss_pred ---eCCCCC-cCCCC-CCEEEEeccccCC---CH---------------------------------HHHHHHHHHHHHh
Confidence 345555 34554 9999999999863 32 2223577888899
Q ss_pred cccCceEEEEec--CcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEE
Q 017439 218 LVPGGLLLLLTP--TIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIE 295 (371)
Q Consensus 218 L~pGG~lvl~~~--gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~ 295 (371)
|+|||++++.-. ..++.. ...+..+...+. ++..| ...++.+|+++++++.| |++.
T Consensus 277 L~pgG~l~i~e~~~~~~~~~-------~~~~~~~~~~~~-~~~~~-------------~~~~~~~~~~~ll~~aG-f~~~ 334 (374)
T 1qzz_A 277 LEPGGRLLVLDRADVEGDGA-------DRFFSTLLDLRM-LTFMG-------------GRVRTRDEVVDLAGSAG-LALA 334 (374)
T ss_dssp EEEEEEEEEEECCH--------------HHHHHHHHHHH-HHHHS-------------CCCCCHHHHHHHHHTTT-EEEE
T ss_pred cCCCcEEEEEechhhcCCCC-------CcchhhhcchHH-HHhCC-------------CcCCCHHHHHHHHHHCC-CceE
Confidence 999999998766 332211 011222211111 11111 13589999999999987 9998
Q ss_pred EEEEeecC
Q 017439 296 IMNTFTHP 303 (371)
Q Consensus 296 ~~e~~~~p 303 (371)
++.....+
T Consensus 335 ~~~~~~~~ 342 (374)
T 1qzz_A 335 SERTSGST 342 (374)
T ss_dssp EEEEECCS
T ss_pred EEEECCCC
Confidence 88776433
|
| >3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=98.34 E-value=3.3e-06 Score=82.53 Aligned_cols=157 Identities=16% Similarity=0.180 Sum_probs=93.2
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhh-cCCC---Ccceeee
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFK-SVPL---SKKYFAT 138 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~-~l~~---~~~~f~~ 138 (371)
+.-+|+|+|||+|..+..+. + + .| ..+++.-|+|.- -...+ .+.. ..+ +.
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~--------~-~----------~p---~~~~~~~D~~~~--~~~a~~~~~~~~~~~~--v~ 232 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCV--------Q-Y----------NK---EVEVTIVDLPQQ--LEMMRKQTAGLSGSER--IH 232 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHH--------H-H----------ST---TCEEEEEECHHH--HHHHHHHHTTCTTGGG--EE
T ss_pred CCCEEEEeCCCcCHHHHHHH--------H-h----------CC---CCEEEEEeCHHH--HHHHHHHHHhcCcccc--eE
Confidence 45799999999999988777 3 2 23 457888898531 11111 1111 112 22
Q ss_pred ccCCCccccc--CCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHh
Q 017439 139 GVPGSFHGRL--FPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQ 216 (371)
Q Consensus 139 gvpgSFy~rL--fP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~ 216 (371)
-+.|+|+..- +| +++|+++++..||.+ |. .|...+|+.-++
T Consensus 233 ~~~~d~~~~~~~~p-~~~D~v~~~~vlh~~---~~---------------------------------~~~~~~l~~~~~ 275 (363)
T 3dp7_A 233 GHGANLLDRDVPFP-TGFDAVWMSQFLDCF---SE---------------------------------EEVISILTRVAQ 275 (363)
T ss_dssp EEECCCCSSSCCCC-CCCSEEEEESCSTTS---CH---------------------------------HHHHHHHHHHHH
T ss_pred EEEccccccCCCCC-CCcCEEEEechhhhC---CH---------------------------------HHHHHHHHHHHH
Confidence 2345566542 45 899999999999842 32 234457888889
Q ss_pred hcccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEE
Q 017439 217 ELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEI 296 (371)
Q Consensus 217 EL~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~ 296 (371)
-|+|||++++.-...++... ....+.. .....+|... .......++.+|+++++++.| |+++.
T Consensus 276 ~L~pgG~l~i~e~~~~~~~~-----~~~~~~~-~~~~~~~~~~----------~~~~~~~~t~~e~~~ll~~AG-f~~v~ 338 (363)
T 3dp7_A 276 SIGKDSKVYIMETLWDRQRY-----ETASYCL-TQISLYFTAM----------ANGNSKMFHSDDLIRCIENAG-LEVEE 338 (363)
T ss_dssp HCCTTCEEEEEECCTTSCSS-----HHHHHHH-HHHHHHHHHS----------SCSSCCSCCHHHHHHHHHTTT-EEESC
T ss_pred hcCCCcEEEEEeeccCCccc-----cchhhHH-HHhhhhHHhh----------hCCCCcccCHHHHHHHHHHcC-CeEEE
Confidence 99999999887654433211 0001111 1111111100 011123569999999999987 98876
Q ss_pred EEE
Q 017439 297 MNT 299 (371)
Q Consensus 297 ~e~ 299 (371)
+..
T Consensus 339 ~~~ 341 (363)
T 3dp7_A 339 IQD 341 (363)
T ss_dssp CCC
T ss_pred EEe
Confidence 653
|
| >1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43 | Back alignment and structure |
|---|
Probab=98.33 E-value=3.2e-06 Score=75.61 Aligned_cols=105 Identities=16% Similarity=0.206 Sum_probs=61.5
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC--CCcceeeeccC
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP--LSKKYFATGVP 141 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~--~~~~~f~~gvp 141 (371)
..+|+|+|||+|..+..+. + + .| +++..|+-..-....=+.+. ..+--|..+.
T Consensus 39 ~~~vLDlG~G~G~~~~~l~--------~-~----------~~-----~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d- 93 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLE--------D-Y----------GF-----EVVGVDISEDMIRKAREYAKSRESNVEFIVGD- 93 (227)
T ss_dssp CCEEEEETCTTSHHHHHHH--------H-T----------TC-----EEEEEESCHHHHHHHHHHHHHTTCCCEEEECC-
T ss_pred CCeEEEEeccCCHHHHHHH--------H-c----------CC-----EEEEEECCHHHHHHHHHHHHhcCCCceEEECc-
Confidence 5799999999998887665 2 1 11 34455543222111111110 0111233332
Q ss_pred CCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccC
Q 017439 142 GSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPG 221 (371)
Q Consensus 142 gSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 221 (371)
+.+--+|++++|+++++.++|+.. + .|...+|+.-++-|+||
T Consensus 94 --~~~~~~~~~~~D~v~~~~~~~~~~--~----------------------------------~~~~~~l~~~~~~L~~g 135 (227)
T 1ve3_A 94 --ARKLSFEDKTFDYVIFIDSIVHFE--P----------------------------------LELNQVFKEVRRVLKPS 135 (227)
T ss_dssp --TTSCCSCTTCEEEEEEESCGGGCC--H----------------------------------HHHHHHHHHHHHHEEEE
T ss_pred --hhcCCCCCCcEEEEEEcCchHhCC--H----------------------------------HHHHHHHHHHHHHcCCC
Confidence 222225778999999999955411 1 23445788888999999
Q ss_pred ceEEEEecCc
Q 017439 222 GLLLLLTPTI 231 (371)
Q Consensus 222 G~lvl~~~gr 231 (371)
|++++..+..
T Consensus 136 G~l~~~~~~~ 145 (227)
T 1ve3_A 136 GKFIMYFTDL 145 (227)
T ss_dssp EEEEEEEECH
T ss_pred cEEEEEecCh
Confidence 9999988653
|
| >1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A* | Back alignment and structure |
|---|
Probab=98.32 E-value=1.2e-05 Score=78.65 Aligned_cols=148 Identities=14% Similarity=0.069 Sum_probs=91.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPG 142 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpg 142 (371)
+..+|+|+|||+|..+..+. + + .| .++++.-|+| ..-...+.++ + +.-+.|
T Consensus 209 ~~~~vLDvG~G~G~~~~~l~--------~-~----------~~---~~~~~~~D~~--~~~~~a~~~~---~--v~~~~~ 259 (372)
T 1fp1_D 209 GISTLVDVGGGSGRNLELII--------S-K----------YP---LIKGINFDLP--QVIENAPPLS---G--IEHVGG 259 (372)
T ss_dssp TCSEEEEETCTTSHHHHHHH--------H-H----------CT---TCEEEEEECH--HHHTTCCCCT---T--EEEEEC
T ss_pred CCCEEEEeCCCCcHHHHHHH--------H-H----------CC---CCeEEEeChH--HHHHhhhhcC---C--CEEEeC
Confidence 45799999999999988776 3 2 23 4567778874 2222222221 2 333455
Q ss_pred CcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCc
Q 017439 143 SFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGG 222 (371)
Q Consensus 143 SFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 222 (371)
.|.+ -+|. +|+++++.+||++ |. .+...+|+.-++-|+|||
T Consensus 260 d~~~-~~~~--~D~v~~~~~lh~~---~d---------------------------------~~~~~~l~~~~~~L~pgG 300 (372)
T 1fp1_D 260 DMFA-SVPQ--GDAMILKAVCHNW---SD---------------------------------EKCIEFLSNCHKALSPNG 300 (372)
T ss_dssp CTTT-CCCC--EEEEEEESSGGGS---CH---------------------------------HHHHHHHHHHHHHEEEEE
T ss_pred Cccc-CCCC--CCEEEEecccccC---CH---------------------------------HHHHHHHHHHHHhcCCCC
Confidence 6776 3565 8999999999973 32 123357888889999999
Q ss_pred eEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHH---H-HcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEE
Q 017439 223 LLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDL---A-NMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMN 298 (371)
Q Consensus 223 ~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~m---v-~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e 298 (371)
++++.-...++... ....+.. ..+.++ + ..| ..++.+|+++++++.| |++.++.
T Consensus 301 ~l~i~e~~~~~~~~------~~~~~~~-~~~~d~~~~~~~~~--------------~~~t~~e~~~ll~~aG-f~~~~~~ 358 (372)
T 1fp1_D 301 KVIIVEFILPEEPN------TSEESKL-VSTLDNLMFITVGG--------------RERTEKQYEKLSKLSG-FSKFQVA 358 (372)
T ss_dssp EEEEEEEEECSSCC------SSHHHHH-HHHHHHHHHHHHSC--------------CCEEHHHHHHHHHHTT-CSEEEEE
T ss_pred EEEEEEeccCCCCc------cchHHHH-HHHhhHHHHhccCC--------------ccCCHHHHHHHHHHCC-CceEEEE
Confidence 99988544433211 0011101 111111 1 122 1469999999999987 9887776
Q ss_pred Ee
Q 017439 299 TF 300 (371)
Q Consensus 299 ~~ 300 (371)
..
T Consensus 359 ~~ 360 (372)
T 1fp1_D 359 CR 360 (372)
T ss_dssp EE
T ss_pred Ec
Confidence 53
|
| >3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A* | Back alignment and structure |
|---|
Probab=98.32 E-value=1.4e-06 Score=81.66 Aligned_cols=113 Identities=17% Similarity=0.218 Sum_probs=71.4
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC----CC---Ccce
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV----PL---SKKY 135 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l----~~---~~~~ 135 (371)
...+|+|+|||+|..++.+. + + ..+|+..|+-..--...-+.. .. .+-.
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~--------~-~---------------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~ 112 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIMLV--------E-E---------------GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWV 112 (293)
T ss_dssp TCCEEEETTCTTSHHHHHHH--------H-T---------------TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCE
T ss_pred CCCEEEEecCCCCHHHHHHH--------H-C---------------CCeEEEEECCHHHHHHHHHhhhhcccccccceee
Confidence 35799999999999988776 2 1 114666666543322222111 00 0112
Q ss_pred eeeccCCCcccccCCCCceeEEEec-CCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHH
Q 017439 136 FATGVPGSFHGRLFPESSLHVAHTS-NALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNAR 214 (371)
Q Consensus 136 f~~gvpgSFy~rLfP~~Svd~~~Ss-~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~R 214 (371)
+..+..-.+-..++|++++|+|+|+ .++|++...... .+++..+|+.-
T Consensus 113 ~~~~d~~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~-------------------------------~~~~~~~l~~~ 161 (293)
T 3thr_A 113 IEEANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGD-------------------------------QSEHRLALKNI 161 (293)
T ss_dssp EEECCGGGHHHHSCCTTCEEEEEECTTCGGGSCCSSSS-------------------------------SHHHHHHHHHH
T ss_pred EeecChhhCccccccCCCeEEEEEcChHHhhcCccccC-------------------------------HHHHHHHHHHH
Confidence 3333311211233789999999999 899996653321 14566789999
Q ss_pred HhhcccCceEEEEecC
Q 017439 215 AQELVPGGLLLLLTPT 230 (371)
Q Consensus 215 a~EL~pGG~lvl~~~g 230 (371)
++-|+|||++++....
T Consensus 162 ~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 162 ASMVRPGGLLVIDHRN 177 (293)
T ss_dssp HHTEEEEEEEEEEEEC
T ss_pred HHHcCCCeEEEEEeCC
Confidence 9999999999999864
|
| >3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A | Back alignment and structure |
|---|
Probab=98.31 E-value=2.8e-06 Score=76.10 Aligned_cols=104 Identities=13% Similarity=0.070 Sum_probs=65.1
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCC--------cce
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLS--------KKY 135 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~--------~~~ 135 (371)
..+|+|+|||+|..+..+. + + .| ..+++.-|+...--...-+.+... +--
T Consensus 30 ~~~vLDiGcG~G~~~~~l~--------~-~----------~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~ 87 (217)
T 3jwh_A 30 ARRVIDLGCGQGNLLKILL--------K-D----------SF---FEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQ 87 (217)
T ss_dssp CCEEEEETCTTCHHHHHHH--------H-C----------TT---CSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEE
T ss_pred CCEEEEeCCCCCHHHHHHH--------h-h----------CC---CCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceE
Confidence 4699999999999988776 2 1 11 235666676544433332222211 112
Q ss_pred eeeccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHH
Q 017439 136 FATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARA 215 (371)
Q Consensus 136 f~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra 215 (371)
|..+. +...-++.+++|+++++.++||+ |. .++..+|+.-+
T Consensus 88 ~~~~d---~~~~~~~~~~fD~v~~~~~l~~~---~~---------------------------------~~~~~~l~~~~ 128 (217)
T 3jwh_A 88 LIQGA---LTYQDKRFHGYDAATVIEVIEHL---DL---------------------------------SRLGAFERVLF 128 (217)
T ss_dssp EEECC---TTSCCGGGCSCSEEEEESCGGGC---CH---------------------------------HHHHHHHHHHH
T ss_pred EEeCC---cccccccCCCcCEEeeHHHHHcC---CH---------------------------------HHHHHHHHHHH
Confidence 33332 22222456899999999999996 32 24456888888
Q ss_pred hhcccCceEEEEe
Q 017439 216 QELVPGGLLLLLT 228 (371)
Q Consensus 216 ~EL~pGG~lvl~~ 228 (371)
+-|+|||.++++.
T Consensus 129 ~~LkpgG~li~~~ 141 (217)
T 3jwh_A 129 EFAQPKIVIVTTP 141 (217)
T ss_dssp TTTCCSEEEEEEE
T ss_pred HHcCCCEEEEEcc
Confidence 9999999766654
|
| >3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae} | Back alignment and structure |
|---|
Probab=98.30 E-value=6.4e-06 Score=76.96 Aligned_cols=138 Identities=18% Similarity=0.182 Sum_probs=84.4
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCC--cceeeecc
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLS--KKYFATGV 140 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~--~~~f~~gv 140 (371)
...+|+|+|||+|.+++.+... ..+|+..|.-..--...=+.+... +--|..+.
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~------------------------g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d 175 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLL------------------------GYDVTSWDHNENSIAFLNETKEKENLNISTALYD 175 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHT------------------------TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCcEEEECCCCCHHHHHHHHC------------------------CCeEEEEECCHHHHHHHHHHHHHcCCceEEEEec
Confidence 3579999999999999877621 114555555443222211111100 11233332
Q ss_pred CCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc
Q 017439 141 PGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP 220 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 220 (371)
+. .+.+++++|+++|+.++||++. .++..+|+.-.+-|+|
T Consensus 176 ---~~-~~~~~~~fD~i~~~~~~~~~~~------------------------------------~~~~~~l~~~~~~Lkp 215 (286)
T 3m70_A 176 ---IN-AANIQENYDFIVSTVVFMFLNR------------------------------------ERVPSIIKNMKEHTNV 215 (286)
T ss_dssp ---GG-GCCCCSCEEEEEECSSGGGSCG------------------------------------GGHHHHHHHHHHTEEE
T ss_pred ---cc-cccccCCccEEEEccchhhCCH------------------------------------HHHHHHHHHHHHhcCC
Confidence 22 2333789999999999999632 2344578888899999
Q ss_pred CceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEE
Q 017439 221 GGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNT 299 (371)
Q Consensus 221 GG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~ 299 (371)
||++++......+..+. -..+.+..+.+|+++.++. |++...+.
T Consensus 216 gG~l~i~~~~~~~~~~~--------------------------------~~~~~~~~~~~~l~~~~~~---~~~~~~~~ 259 (286)
T 3m70_A 216 GGYNLIVAAMSTDDVPC--------------------------------PLPFSFTFAENELKEYYKD---WEFLEYNE 259 (286)
T ss_dssp EEEEEEEEEBCCSSSCC--------------------------------SSCCSCCBCTTHHHHHTTT---SEEEEEEC
T ss_pred CcEEEEEEecCCCCCCC--------------------------------CCCccccCCHHHHHHHhcC---CEEEEEEc
Confidence 99988876443322110 0112456788999999864 88877754
|
| >3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.30 E-value=1.6e-06 Score=82.21 Aligned_cols=48 Identities=17% Similarity=0.275 Sum_probs=37.4
Q ss_pred CCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEe
Q 017439 149 FPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLT 228 (371)
Q Consensus 149 fP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~ 228 (371)
++++++|+|+|...+||+.- ..-..++..+|+.-++-|+|||+|++..
T Consensus 173 ~~~~~fD~I~~~~vl~~ihl--------------------------------~~~~~~~~~~l~~~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 173 AQTPEYDVVLCLSLTKWVHL--------------------------------NWGDEGLKRMFRRIYRHLRPGGILVLEP 220 (292)
T ss_dssp TCCCCEEEEEEESCHHHHHH--------------------------------HHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccCCCcCEEEEChHHHHhhh--------------------------------cCCHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 46899999999999999420 0112466778999999999999999964
|
| >2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.29 E-value=4.2e-06 Score=74.38 Aligned_cols=135 Identities=16% Similarity=0.124 Sum_probs=78.1
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPG 142 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpg 142 (371)
...+|+|+|||+|..+..+ . .+ +++..|....--...-+.. .+--+..+.
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---------~------------~~-----~v~~vD~s~~~~~~a~~~~--~~~~~~~~d-- 85 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---------P------------YP-----QKVGVEPSEAMLAVGRRRA--PEATWVRAW-- 85 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---------C------------CS-----EEEEECCCHHHHHHHHHHC--TTSEEECCC--
T ss_pred CCCeEEEECCCCCHhHHhC---------C------------CC-----eEEEEeCCHHHHHHHHHhC--CCcEEEEcc--
Confidence 4569999999999876644 1 10 3444554332222211111 111222222
Q ss_pred CcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCc
Q 017439 143 SFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGG 222 (371)
Q Consensus 143 SFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 222 (371)
+.+--+|++++|+++++.++||+.. | ..+|+.-.+-|+|||
T Consensus 86 -~~~~~~~~~~fD~v~~~~~l~~~~~-~-------------------------------------~~~l~~~~~~L~pgG 126 (211)
T 2gs9_A 86 -GEALPFPGESFDVVLLFTTLEFVED-V-------------------------------------ERVLLEARRVLRPGG 126 (211)
T ss_dssp -TTSCCSCSSCEEEEEEESCTTTCSC-H-------------------------------------HHHHHHHHHHEEEEE
T ss_pred -cccCCCCCCcEEEEEEcChhhhcCC-H-------------------------------------HHHHHHHHHHcCCCC
Confidence 1221257889999999999999642 1 136777778999999
Q ss_pred eEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhh
Q 017439 223 LLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIK 287 (371)
Q Consensus 223 ~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~ 287 (371)
++++..+...+ .|..+ ...+...|.. ..-...+.|.+|++++++
T Consensus 127 ~l~i~~~~~~~-----------~~~~~---~~~~~~~~~~-------~~~~~~~~s~~~l~~~l~ 170 (211)
T 2gs9_A 127 ALVVGVLEALS-----------PWAAL---YRRLGEKGVL-------PWAQARFLAREDLKALLG 170 (211)
T ss_dssp EEEEEEECTTS-----------HHHHH---HHHHHHTTCT-------TGGGCCCCCHHHHHHHHC
T ss_pred EEEEEecCCcC-----------cHHHH---HHHHhhccCc-------cccccccCCHHHHHHHhc
Confidence 99999876532 22222 1112122311 111244689999999999
|
| >2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.27 E-value=1.7e-06 Score=77.26 Aligned_cols=69 Identities=23% Similarity=0.322 Sum_probs=51.9
Q ss_pred CCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEe
Q 017439 149 FPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLT 228 (371)
Q Consensus 149 fP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~ 228 (371)
+|++++|+++++.++|| + |...+|+.-++-|+|||++++..
T Consensus 111 ~~~~~fD~v~~~~~l~~----~-----------------------------------~~~~~l~~~~~~L~~gG~l~i~~ 151 (215)
T 2zfu_A 111 LEDESVDVAVFCLSLMG----T-----------------------------------NIRDFLEEANRVLKPGGLLKVAE 151 (215)
T ss_dssp CCTTCEEEEEEESCCCS----S-----------------------------------CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCEeEEEEehhccc----c-----------------------------------CHHHHHHHHHHhCCCCeEEEEEE
Confidence 57889999999999996 2 11236777778899999999975
Q ss_pred cCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEe
Q 017439 229 PTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTF 300 (371)
Q Consensus 229 ~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~ 300 (371)
.... +++.+++.+.+++.| |+++..+..
T Consensus 152 ~~~~-------------------------------------------~~~~~~~~~~l~~~G-f~~~~~~~~ 179 (215)
T 2zfu_A 152 VSSR-------------------------------------------FEDVRTFLRAVTKLG-FKIVSKDLT 179 (215)
T ss_dssp CGGG-------------------------------------------CSCHHHHHHHHHHTT-EEEEEEECC
T ss_pred cCCC-------------------------------------------CCCHHHHHHHHHHCC-CEEEEEecC
Confidence 3210 228899999999887 988776543
|
| >1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A* | Back alignment and structure |
|---|
Probab=98.27 E-value=1.2e-05 Score=78.03 Aligned_cols=153 Identities=15% Similarity=0.135 Sum_probs=93.3
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CC-Ccceee
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PL-SKKYFA 137 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~-~~~~f~ 137 (371)
.+..+|+|+|||+|..+..+. + + .| ..+++.-|+| .--...=+.+ .. .+--|.
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~--------~-~----------~p---~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~ 245 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAML--------K-H----------FP---ELDSTILNLP-GAIDLVNENAAEKGVADRMRGI 245 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHH--------H-H----------CT---TCEEEEEECG-GGHHHHHHHHHHTTCTTTEEEE
T ss_pred CCCCEEEEECCcccHHHHHHH--------H-H----------CC---CCeEEEEecH-HHHHHHHHHHHhcCCCCCEEEE
Confidence 346799999999999888776 3 2 23 4578888983 2222211111 11 112233
Q ss_pred eccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 138 TGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 138 ~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
.+.|.+--+|+. |+++++..+|.+ |+ ++...+|+.-++-
T Consensus 246 ---~~d~~~~~~~~~--D~v~~~~vlh~~---~d---------------------------------~~~~~~l~~~~~~ 284 (359)
T 1x19_A 246 ---AVDIYKESYPEA--DAVLFCRILYSA---NE---------------------------------QLSTIMCKKAFDA 284 (359)
T ss_dssp ---ECCTTTSCCCCC--SEEEEESCGGGS---CH---------------------------------HHHHHHHHHHHTT
T ss_pred ---eCccccCCCCCC--CEEEEechhccC---CH---------------------------------HHHHHHHHHHHHh
Confidence 345655445554 999999999842 32 2345578888899
Q ss_pred cccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHH---cCCCchhhhcccCcccccCCHHHHHHHhhcCCceEE
Q 017439 218 LVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLAN---MGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSI 294 (371)
Q Consensus 218 L~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~---eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I 294 (371)
|+|||++++.-...++.. ...+..+. .|.. .|. ....+++.+|+++++++.| |++
T Consensus 285 L~pgG~l~i~e~~~~~~~-------~~~~~~~~----~~~~~~~~g~----------~~~~~~t~~e~~~ll~~aG-f~~ 342 (359)
T 1x19_A 285 MRSGGRLLILDMVIDDPE-------NPNFDYLS----HYILGAGMPF----------SVLGFKEQARYKEILESLG-YKD 342 (359)
T ss_dssp CCTTCEEEEEEECCCCTT-------SCCHHHHH----HHGGGGGSSC----------CCCCCCCGGGHHHHHHHHT-CEE
T ss_pred cCCCCEEEEEecccCCCC-------CchHHHHH----HHHHhcCCCC----------cccCCCCHHHHHHHHHHCC-Cce
Confidence 999999977665544321 01122221 2211 121 1223589999999999987 998
Q ss_pred EEEEEe
Q 017439 295 EIMNTF 300 (371)
Q Consensus 295 ~~~e~~ 300 (371)
.++...
T Consensus 343 v~~~~~ 348 (359)
T 1x19_A 343 VTMVRK 348 (359)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 777654
|
| >1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A* | Back alignment and structure |
|---|
Probab=98.25 E-value=1.1e-05 Score=78.06 Aligned_cols=156 Identities=17% Similarity=0.158 Sum_probs=93.7
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CCC-cceee
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PLS-KKYFA 137 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~~-~~~f~ 137 (371)
.+..+|+|+|||+|..+..+. + + .| .++++.-|+| .-....=+.+ ... +--|.
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~--------~-~----------~~---~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~ 238 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIA--------R-R----------AP---HVSATVLEMA-GTVDTARSYLKDEGLSDRVDVV 238 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHH--------H-H----------CT---TCEEEEEECT-THHHHHHHHHHHTTCTTTEEEE
T ss_pred ccCcEEEEeCCcCcHHHHHHH--------H-h----------CC---CCEEEEecCH-HHHHHHHHHHHhcCCCCceEEE
Confidence 345799999999999887776 3 2 22 4567788883 2222111111 111 22233
Q ss_pred eccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 138 TGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 138 ~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
. ++|.+ -+|.+ +|+++++..+|.+ |. .+...+|+.-.+-
T Consensus 239 ~---~d~~~-~~~~~-~D~v~~~~vl~~~---~~---------------------------------~~~~~~l~~~~~~ 277 (360)
T 1tw3_A 239 E---GDFFE-PLPRK-ADAIILSFVLLNW---PD---------------------------------HDAVRILTRCAEA 277 (360)
T ss_dssp E---CCTTS-CCSSC-EEEEEEESCGGGS---CH---------------------------------HHHHHHHHHHHHT
T ss_pred e---CCCCC-CCCCC-ccEEEEcccccCC---CH---------------------------------HHHHHHHHHHHHh
Confidence 3 45554 34554 9999999999863 32 2334577888889
Q ss_pred cccCceEEEEecC-cCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEE
Q 017439 218 LVPGGLLLLLTPT-IRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEI 296 (371)
Q Consensus 218 L~pGG~lvl~~~g-r~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~ 296 (371)
|+|||++++.-.. .++... ..+..+.+.. -|+..| ...++.+|+++++++.| |++++
T Consensus 278 L~pgG~l~i~e~~~~~~~~~-------~~~~~~~~~~-~~~~~~-------------~~~~t~~e~~~ll~~aG-f~~~~ 335 (360)
T 1tw3_A 278 LEPGGRILIHERDDLHENSF-------NEQFTELDLR-MLVFLG-------------GALRTREKWDGLAASAG-LVVEE 335 (360)
T ss_dssp EEEEEEEEEEECCBCGGGCC-------SHHHHHHHHH-HHHHHS-------------CCCCBHHHHHHHHHHTT-EEEEE
T ss_pred cCCCcEEEEEEEeccCCCCC-------cchhhhccHH-HhhhcC-------------CcCCCHHHHHHHHHHCC-CeEEE
Confidence 9999999987655 332210 0122111111 112112 12579999999999987 99988
Q ss_pred EEEeecC
Q 017439 297 MNTFTHP 303 (371)
Q Consensus 297 ~e~~~~p 303 (371)
+...+.+
T Consensus 336 ~~~~~~~ 342 (360)
T 1tw3_A 336 VRQLPSP 342 (360)
T ss_dssp EEEEECS
T ss_pred EEeCCCC
Confidence 8776543
|
| >2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=98.23 E-value=4.5e-06 Score=73.80 Aligned_cols=110 Identities=15% Similarity=0.155 Sum_probs=67.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC--CCcceeeecc
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP--LSKKYFATGV 140 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~--~~~~~f~~gv 140 (371)
...+|+|+|||+|..++..+. . . ..+++..|.-..--...-+.+. ..+--|..+.
T Consensus 23 ~~~~vLDiGcG~G~~~~~~~~-------~------------~----~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d 79 (209)
T 2p8j_A 23 LDKTVLDCGAGGDLPPLSIFV-------E------------D----GYKTYGIEISDLQLKKAENFSRENNFKLNISKGD 79 (209)
T ss_dssp SCSEEEEESCCSSSCTHHHHH-------H------------T----TCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECC
T ss_pred CCCEEEEECCCCCHHHHHHHH-------h------------C----CCEEEEEECCHHHHHHHHHHHHhcCCceEEEECc
Confidence 357999999999998776551 1 0 1245566654432222111110 0111233332
Q ss_pred CCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc
Q 017439 141 PGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP 220 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 220 (371)
. ..--+|++++|+++++.++|++ |. .|...+|+.-++-|+|
T Consensus 80 ~---~~~~~~~~~fD~v~~~~~l~~~---~~---------------------------------~~~~~~l~~~~~~Lkp 120 (209)
T 2p8j_A 80 I---RKLPFKDESMSFVYSYGTIFHM---RK---------------------------------NDVKEAIDEIKRVLKP 120 (209)
T ss_dssp T---TSCCSCTTCEEEEEECSCGGGS---CH---------------------------------HHHHHHHHHHHHHEEE
T ss_pred h---hhCCCCCCceeEEEEcChHHhC---CH---------------------------------HHHHHHHHHHHHHcCC
Confidence 1 1212578899999999999985 21 3455678888899999
Q ss_pred CceEEEEecCcCCC
Q 017439 221 GGLLLLLTPTIRDG 234 (371)
Q Consensus 221 GG~lvl~~~gr~~~ 234 (371)
||++++.....++.
T Consensus 121 gG~l~~~~~~~~~~ 134 (209)
T 2p8j_A 121 GGLACINFLTTKDE 134 (209)
T ss_dssp EEEEEEEEEETTST
T ss_pred CcEEEEEEecccch
Confidence 99999999876543
|
| >3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15} | Back alignment and structure |
|---|
Probab=98.20 E-value=3.7e-06 Score=75.97 Aligned_cols=45 Identities=20% Similarity=0.327 Sum_probs=35.2
Q ss_pred CCceeEEEecC-CccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEec
Q 017439 151 ESSLHVAHTSN-ALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTP 229 (371)
Q Consensus 151 ~~Svd~~~Ss~-alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~ 229 (371)
++++|+++++. ++||+.. ..|...+|+.-++-|+|||++++.+.
T Consensus 94 ~~~fD~v~~~~~~~~~~~~-----------------------------------~~~~~~~l~~~~~~L~pgG~l~~~~~ 138 (243)
T 3d2l_A 94 PEPVDAITILCDSLNYLQT-----------------------------------EADVKQTFDSAARLLTDGGKLLFDVH 138 (243)
T ss_dssp SSCEEEEEECTTGGGGCCS-----------------------------------HHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCcCEEEEeCCchhhcCC-----------------------------------HHHHHHHHHHHHHhcCCCeEEEEEcC
Confidence 37899999987 9999532 13455678888889999999999775
Q ss_pred C
Q 017439 230 T 230 (371)
Q Consensus 230 g 230 (371)
.
T Consensus 139 ~ 139 (243)
T 3d2l_A 139 S 139 (243)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi} | Back alignment and structure |
|---|
Probab=98.19 E-value=1.3e-05 Score=69.59 Aligned_cols=71 Identities=17% Similarity=0.058 Sum_probs=44.6
Q ss_pred eEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCCCc
Q 017439 65 FKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPGSF 144 (371)
Q Consensus 65 ~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpgSF 144 (371)
-+|+|+|||+|..++.+... - +|+..|+-..--.. ..+--|..+. +
T Consensus 25 ~~vLD~GcG~G~~~~~l~~~------------------------~-~v~gvD~s~~~~~~------~~~~~~~~~d---~ 70 (170)
T 3q87_B 25 KIVLDLGTSTGVITEQLRKR------------------------N-TVVSTDLNIRALES------HRGGNLVRAD---L 70 (170)
T ss_dssp CEEEEETCTTCHHHHHHTTT------------------------S-EEEEEESCHHHHHT------CSSSCEEECS---T
T ss_pred CeEEEeccCccHHHHHHHhc------------------------C-cEEEEECCHHHHhc------ccCCeEEECC---h
Confidence 49999999999988877621 1 34444443322111 1112233333 3
Q ss_pred ccccCCCCceeEEEecCCccccCCCC
Q 017439 145 HGRLFPESSLHVAHTSNALPWLSKIP 170 (371)
Q Consensus 145 y~rLfP~~Svd~~~Ss~alHWLS~vP 170 (371)
.+ .+|++++|+++|+..+||.+..+
T Consensus 71 ~~-~~~~~~fD~i~~n~~~~~~~~~~ 95 (170)
T 3q87_B 71 LC-SINQESVDVVVFNPPYVPDTDDP 95 (170)
T ss_dssp TT-TBCGGGCSEEEECCCCBTTCCCT
T ss_pred hh-hcccCCCCEEEECCCCccCCccc
Confidence 33 45669999999999999977643
|
| >2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41 | Back alignment and structure |
|---|
Probab=98.19 E-value=2.3e-06 Score=79.16 Aligned_cols=160 Identities=15% Similarity=0.194 Sum_probs=89.1
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPG 142 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpg 142 (371)
...+|+|+|||+|..+..+. + + ..+++..|.-..--...-+... .. +..+.
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~--------~-~---------------~~~v~gvD~s~~~l~~a~~~~~--~~-~~~~d-- 104 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQ--------E-R---------------GFEVVLVDPSKEMLEVAREKGV--KN-VVEAK-- 104 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHH--------T-T---------------TCEEEEEESCHHHHHHHHHHTC--SC-EEECC--
T ss_pred CCCeEEEeCCCcCHHHHHHH--------H-c---------------CCeEEEEeCCHHHHHHHHhhcC--CC-EEECc--
Confidence 34699999999999988765 2 1 1246666664433222222222 11 44443
Q ss_pred CcccccCCCCceeEEEecC-CccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccC
Q 017439 143 SFHGRLFPESSLHVAHTSN-ALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPG 221 (371)
Q Consensus 143 SFy~rLfP~~Svd~~~Ss~-alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 221 (371)
+..--+|++++|+++++. .+||... | ..+|+.-++-|+||
T Consensus 105 -~~~~~~~~~~fD~v~~~~~~~~~~~~-~-------------------------------------~~~l~~~~~~Lkpg 145 (260)
T 2avn_A 105 -AEDLPFPSGAFEAVLALGDVLSYVEN-K-------------------------------------DKAFSEIRRVLVPD 145 (260)
T ss_dssp -TTSCCSCTTCEEEEEECSSHHHHCSC-H-------------------------------------HHHHHHHHHHEEEE
T ss_pred -HHHCCCCCCCEEEEEEcchhhhcccc-H-------------------------------------HHHHHHHHHHcCCC
Confidence 222236789999999986 4677433 2 23677778899999
Q ss_pred ceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEee
Q 017439 222 GLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFT 301 (371)
Q Consensus 222 G~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~~ 301 (371)
|++++...+......... ... .|+. +..+...|...... ..+.++.++.+++|++++ .| |+++......
T Consensus 146 G~l~~~~~~~~~~~~~~~-~~~-~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l---aG-f~~~~~~~~~ 214 (260)
T 2avn_A 146 GLLIATVDNFYTFLQQMI-EKD-AWDQ----ITRFLKTQTTSVGT-TLFSFNSYAFKPEDLDSL---EG-FETVDIRGIG 214 (260)
T ss_dssp EEEEEEEEBHHHHHHHHH-HTT-CHHH----HHHHHHHCEEEEEC-SSEEEEEECBCGGGGSSC---TT-EEEEEEEEEC
T ss_pred eEEEEEeCChHHHHHHhh-cch-hHHH----HHHHHhccccccCC-CceeEEEeccCHHHHHHh---cC-ceEEEEECCC
Confidence 999999876531100000 000 1222 22223344332110 011122346789998887 45 9998887663
|
| >1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A* | Back alignment and structure |
|---|
Probab=98.18 E-value=9.2e-06 Score=78.94 Aligned_cols=149 Identities=15% Similarity=0.098 Sum_probs=90.9
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCCC
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPGS 143 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpgS 143 (371)
..+|+|+|||+|..+..+. + + .| ..+++.-|+| ..-...+.+ .+ +.-+.|.
T Consensus 194 ~~~vlDvG~G~G~~~~~l~--------~-~----------~p---~~~~~~~D~~--~~~~~a~~~---~~--v~~~~~d 244 (358)
T 1zg3_A 194 LESLVDVGGGTGGVTKLIH--------E-I----------FP---HLKCTVFDQP--QVVGNLTGN---EN--LNFVGGD 244 (358)
T ss_dssp CSEEEEETCTTSHHHHHHH--------H-H----------CT---TSEEEEEECH--HHHSSCCCC---SS--EEEEECC
T ss_pred CCEEEEECCCcCHHHHHHH--------H-H----------CC---CCeEEEeccH--HHHhhcccC---CC--cEEEeCc
Confidence 4699999999999988777 3 2 23 3466777885 222222221 12 3334567
Q ss_pred cccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc---
Q 017439 144 FHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP--- 220 (371)
Q Consensus 144 Fy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p--- 220 (371)
|+. -+| ++|+++++..||++ |. .+...+|+.-.+-|+|
T Consensus 245 ~~~-~~~--~~D~v~~~~vlh~~---~d---------------------------------~~~~~~l~~~~~~L~p~~~ 285 (358)
T 1zg3_A 245 MFK-SIP--SADAVLLKWVLHDW---ND---------------------------------EQSLKILKNSKEAISHKGK 285 (358)
T ss_dssp TTT-CCC--CCSEEEEESCGGGS---CH---------------------------------HHHHHHHHHHHHHTGGGGG
T ss_pred cCC-CCC--CceEEEEcccccCC---CH---------------------------------HHHHHHHHHHHHhCCCCCC
Confidence 777 345 49999999999973 32 1233478888899999
Q ss_pred CceEEEEecCcCCCCCCCCCCCc-chHHHHHHHHHHHH-HcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEE
Q 017439 221 GGLLLLLTPTIRDGIPMFSTPEG-TNFDYLGSCLYDLA-NMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMN 298 (371)
Q Consensus 221 GG~lvl~~~gr~~~~~~~~~~~~-~~~~~l~~al~~mv-~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e 298 (371)
||++++.-...++... ... .....+.+. .-|+ ..| ..++.+|+++++++.| |++.++.
T Consensus 286 gG~l~i~e~~~~~~~~----~~~~~~~~~~~d~-~~~~~~~g--------------~~~t~~e~~~ll~~aG-f~~~~~~ 345 (358)
T 1zg3_A 286 DGKVIIIDISIDETSD----DRGLTELQLDYDL-VMLTMFLG--------------KERTKQEWEKLIYDAG-FSSYKIT 345 (358)
T ss_dssp GCEEEEEECEECTTCS----CHHHHHHHHHHHH-HHHHHHSC--------------CCEEHHHHHHHHHHTT-CCEEEEE
T ss_pred CcEEEEEEeccCCCCc----cchhhhHHHhhCH-HHhccCCC--------------CCCCHHHHHHHHHHcC-CCeeEEE
Confidence 9999987654433211 000 001111111 1111 112 1569999999999987 9887765
Q ss_pred Ee
Q 017439 299 TF 300 (371)
Q Consensus 299 ~~ 300 (371)
..
T Consensus 346 ~~ 347 (358)
T 1zg3_A 346 PI 347 (358)
T ss_dssp EE
T ss_pred ec
Confidence 53
|
| >1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53 | Back alignment and structure |
|---|
Probab=98.16 E-value=2.4e-05 Score=70.03 Aligned_cols=165 Identities=12% Similarity=0.096 Sum_probs=91.3
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CCCcceeeecc
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PLSKKYFATGV 140 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~~~~~f~~gv 140 (371)
.-+|+|+|||+|..++.+. + + .| ..+++..|.-..--...-+.+ ...+-.|+.+.
T Consensus 42 ~~~vLDiGcG~G~~~~~la--------~-~----------~p---~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d 99 (214)
T 1yzh_A 42 NPIHVEVGSGKGAFVSGMA--------K-Q----------NP---DINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVD 99 (214)
T ss_dssp CCEEEEESCTTSHHHHHHH--------H-H----------CT---TSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECC
T ss_pred CCeEEEEccCcCHHHHHHH--------H-H----------CC---CCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCC
Confidence 4689999999999998776 2 1 22 335677776543322222211 11122344444
Q ss_pred CCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc
Q 017439 141 PGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP 220 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 220 (371)
... ..+.+|++++|+++++...+|..+.... . .-+...||+.-++-|+|
T Consensus 100 ~~~-~~~~~~~~~~D~i~~~~~~~~~~~~~~~-~-----------------------------~~~~~~~l~~~~~~Lkp 148 (214)
T 1yzh_A 100 GSD-LTDYFEDGEIDRLYLNFSDPWPKKRHEK-R-----------------------------RLTYKTFLDTFKRILPE 148 (214)
T ss_dssp SSC-GGGTSCTTCCSEEEEESCCCCCSGGGGG-G-----------------------------STTSHHHHHHHHHHSCT
T ss_pred HHH-HHhhcCCCCCCEEEEECCCCccccchhh-h-----------------------------ccCCHHHHHHHHHHcCC
Confidence 333 3345788999999999888774321000 0 00123477777788999
Q ss_pred CceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhh-hcccCcccccCCHHHHHHHhhcCCceEEEEE
Q 017439 221 GGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEK-VDSFNVPMYYPFLGELMGHIKRNKNFSIEIM 297 (371)
Q Consensus 221 GG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~-~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~ 297 (371)
||.+++..... +....++..|.+.|.-..+. .|-..-+.......+++....+.| +.|-++
T Consensus 149 gG~l~~~~~~~---------------~~~~~~~~~~~~~g~~~~~~~~d~~~~~~~~~~~t~~e~~~~~~g-~~i~~~ 210 (214)
T 1yzh_A 149 NGEIHFKTDNR---------------GLFEYSLVSFSQYGMKLNGVWLDLHASDFEGNVMTEYEQKFSNKG-QVIYRV 210 (214)
T ss_dssp TCEEEEEESCH---------------HHHHHHHHHHHHHTCEEEEEESSGGGSCCCCCCCCHHHHHTGGGC-CCCEEE
T ss_pred CcEEEEEeCCH---------------HHHHHHHHHHHHCCCeeeeccccccccCCCCCCCcHHHHHHHHCC-CCeEEE
Confidence 99999865221 22334444555556432211 122222333344567777777766 555444
|
| >3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=98.08 E-value=7.6e-06 Score=75.49 Aligned_cols=67 Identities=16% Similarity=0.174 Sum_probs=42.2
Q ss_pred HHHHHHhhcccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcC
Q 017439 210 FLNARAQELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRN 289 (371)
Q Consensus 210 FL~~Ra~EL~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~ 289 (371)
+|+.-++-|+|||++++.+ .+ .|+ ..+..+-..|.+..... +..+.+|+.+.+++.
T Consensus 119 ~l~~i~rvLkpgG~lv~~~--~p------------~~e---~~~~~~~~~G~~~d~~~-------~~~~~~~l~~~l~~a 174 (232)
T 3opn_A 119 ILPPLYEILEKNGEVAALI--KP------------QFE---AGREQVGKNGIIRDPKV-------HQMTIEKVLKTATQL 174 (232)
T ss_dssp THHHHHHHSCTTCEEEEEE--CH------------HHH---SCHHHHC-CCCCCCHHH-------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCCEEEEEE--Cc------------ccc---cCHHHhCcCCeecCcch-------hHHHHHHHHHHHHHC
Confidence 4667778999999999965 11 011 11333333455432221 223889999999998
Q ss_pred CceEEEEEEEee
Q 017439 290 KNFSIEIMNTFT 301 (371)
Q Consensus 290 g~F~I~~~e~~~ 301 (371)
| |++..++..+
T Consensus 175 G-f~v~~~~~~p 185 (232)
T 3opn_A 175 G-FSVKGLTFSP 185 (232)
T ss_dssp T-EEEEEEEECS
T ss_pred C-CEEEEEEEcc
Confidence 7 9998887653
|
| >1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A* | Back alignment and structure |
|---|
Probab=98.06 E-value=5.3e-05 Score=73.37 Aligned_cols=151 Identities=14% Similarity=0.082 Sum_probs=91.3
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPG 142 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpg 142 (371)
+..+|+|+|||+|..+..+. + + .| ..+++.-|+|. .-...+.. .+ +.-+.|
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~--------~-~----------~p---~~~~~~~D~~~--~~~~a~~~---~~--v~~~~~ 238 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIIC--------E-T----------FP---KLKCIVFDRPQ--VVENLSGS---NN--LTYVGG 238 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHH--------H-H----------CT---TCEEEEEECHH--HHTTCCCB---TT--EEEEEC
T ss_pred cCceEEEeCCCccHHHHHHH--------H-H----------CC---CCeEEEeeCHH--HHhhcccC---CC--cEEEec
Confidence 45799999999998887766 3 2 23 45788888842 11122221 12 333456
Q ss_pred CcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc--
Q 017439 143 SFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP-- 220 (371)
Q Consensus 143 SFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p-- 220 (371)
.|++ -+|+ +|+++++.+||.+ |. .+...+|+.-++-|+|
T Consensus 239 d~~~-~~p~--~D~v~~~~~lh~~---~d---------------------------------~~~~~~l~~~~~~L~p~~ 279 (352)
T 1fp2_A 239 DMFT-SIPN--ADAVLLKYILHNW---TD---------------------------------KDCLRILKKCKEAVTNDG 279 (352)
T ss_dssp CTTT-CCCC--CSEEEEESCGGGS---CH---------------------------------HHHHHHHHHHHHHHSGGG
T ss_pred cccC-CCCC--ccEEEeehhhccC---CH---------------------------------HHHHHHHHHHHHhCCCCC
Confidence 6766 3463 9999999999952 32 1233478888889999
Q ss_pred -CceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEE
Q 017439 221 -GGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNT 299 (371)
Q Consensus 221 -GG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~ 299 (371)
||++++.-...++... ...+.. ...+.++.--. + +-..++.+|+++++++.| |++.++..
T Consensus 280 ~gG~l~i~e~~~~~~~~------~~~~~~-~~~~~d~~~~~---------~--~g~~~t~~e~~~ll~~aG-f~~~~~~~ 340 (352)
T 1fp2_A 280 KRGKVTIIDMVIDKKKD------ENQVTQ-IKLLMDVNMAC---------L--NGKERNEEEWKKLFIEAG-FQHYKISP 340 (352)
T ss_dssp CCCEEEEEECEECTTTS------CHHHHH-HHHHHHHHGGG---------G--TCCCEEHHHHHHHHHHTT-CCEEEEEE
T ss_pred CCcEEEEEEeecCCCCC------ccchhh-hHhhccHHHHh---------c--cCCCCCHHHHHHHHHHCC-CCeeEEEe
Confidence 9999988765543211 000011 11122221000 0 122468999999999987 98877654
Q ss_pred e
Q 017439 300 F 300 (371)
Q Consensus 300 ~ 300 (371)
.
T Consensus 341 ~ 341 (352)
T 1fp2_A 341 L 341 (352)
T ss_dssp E
T ss_pred c
Confidence 3
|
| >3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP} | Back alignment and structure |
|---|
Probab=98.05 E-value=1.8e-05 Score=70.76 Aligned_cols=151 Identities=13% Similarity=0.085 Sum_probs=82.6
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC-------CCCcc
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV-------PLSKK 134 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l-------~~~~~ 134 (371)
....+|+|+|||+|..+..+. + + .| ..+|+..|+-..-...+-+.. ...+-
T Consensus 26 ~~~~~vLDiGcG~G~~~~~la--------~-~----------~p---~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v 83 (218)
T 3mq2_A 26 QYDDVVLDVGTGDGKHPYKVA--------R-Q----------NP---SRLVVALDADKSRMEKISAKAAAKPAKGGLPNL 83 (218)
T ss_dssp TSSEEEEEESCTTCHHHHHHH--------H-H----------CT---TEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTE
T ss_pred cCCCEEEEecCCCCHHHHHHH--------H-H----------CC---CCEEEEEECCHHHHHHHHHHHHHhhhhcCCCce
Confidence 345799999999999998877 2 2 22 347888888776544432111 11122
Q ss_pred eeeeccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHH
Q 017439 135 YFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNAR 214 (371)
Q Consensus 135 ~f~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~R 214 (371)
.|..+. +.+--+++++ |.++. .+.|....... -.|...+|+.-
T Consensus 84 ~~~~~d---~~~l~~~~~~-d~v~~--~~~~~~~~~~~-------------------------------~~~~~~~l~~~ 126 (218)
T 3mq2_A 84 LYLWAT---AERLPPLSGV-GELHV--LMPWGSLLRGV-------------------------------LGSSPEMLRGM 126 (218)
T ss_dssp EEEECC---STTCCSCCCE-EEEEE--ESCCHHHHHHH-------------------------------HTSSSHHHHHH
T ss_pred EEEecc---hhhCCCCCCC-CEEEE--Eccchhhhhhh-------------------------------hccHHHHHHHH
Confidence 344444 2221235566 66662 22232110000 11223467788
Q ss_pred HhhcccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCccccc--CCHHHHHHHhhcCCce
Q 017439 215 AQELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYY--PFLGELMGHIKRNKNF 292 (371)
Q Consensus 215 a~EL~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~--ps~eE~~~~i~~~g~F 292 (371)
++-|+|||++++.+....-.... . ++. ..|.+. ...++++..+++.| |
T Consensus 127 ~~~LkpgG~l~~~~~~~~~~~~~-------------------------~--~~~--~~~~~~~~~~~~~l~~~l~~aG-f 176 (218)
T 3mq2_A 127 AAVCRPGASFLVALNLHAWRPSV-------------------------P--EVG--EHPEPTPDSADEWLAPRYAEAG-W 176 (218)
T ss_dssp HHTEEEEEEEEEEEEGGGBTTBC-------------------------G--GGT--TCCCCCHHHHHHHHHHHHHHTT-E
T ss_pred HHHcCCCcEEEEEeccccccccc-------------------------c--ccc--cCCccchHHHHHHHHHHHHHcC-C
Confidence 88999999999976432211100 0 000 111111 12455888888877 9
Q ss_pred EEEEEEEee
Q 017439 293 SIEIMNTFT 301 (371)
Q Consensus 293 ~I~~~e~~~ 301 (371)
+|..++.+.
T Consensus 177 ~i~~~~~~~ 185 (218)
T 3mq2_A 177 KLADCRYLE 185 (218)
T ss_dssp EEEEEEEEC
T ss_pred Cceeeeccc
Confidence 999998773
|
| >3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus} | Back alignment and structure |
|---|
Probab=98.04 E-value=5.8e-05 Score=72.23 Aligned_cols=148 Identities=18% Similarity=0.117 Sum_probs=83.5
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeecc-C
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGV-P 141 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gv-p 141 (371)
...+|+|+|||+|..|..++ + + + .-+|+.-|+-.+.-..-.+.-+ +....... -
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~--------~-~----g----------a~~V~aVDvs~~mL~~a~r~~~--rv~~~~~~ni 139 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVML--------Q-N----G----------AKLVYAVDVGTNQLVWKLRQDD--RVRSMEQYNF 139 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHH--------H-T----T----------CSEEEEECSSSSCSCHHHHTCT--TEEEECSCCG
T ss_pred cccEEEecCCCccHHHHHHH--------h-C----C----------CCEEEEEECCHHHHHHHHHhCc--ccceecccCc
Confidence 45699999999999998776 2 1 0 1157888887665332112111 10000000 0
Q ss_pred CCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccC
Q 017439 142 GSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPG 221 (371)
Q Consensus 142 gSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 221 (371)
...-..-+|..++|++++..++|||.+ +|..-++-|+||
T Consensus 140 ~~l~~~~l~~~~fD~v~~d~sf~sl~~-----------------------------------------vL~e~~rvLkpG 178 (291)
T 3hp7_A 140 RYAEPVDFTEGLPSFASIDVSFISLNL-----------------------------------------ILPALAKILVDG 178 (291)
T ss_dssp GGCCGGGCTTCCCSEEEECCSSSCGGG-----------------------------------------THHHHHHHSCTT
T ss_pred eecchhhCCCCCCCEEEEEeeHhhHHH-----------------------------------------HHHHHHHHcCcC
Confidence 000011256678999999999998622 255556789999
Q ss_pred ceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEee
Q 017439 222 GLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFT 301 (371)
Q Consensus 222 G~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~~ 301 (371)
|++++.+--.-+.... . + -..|.+..... +..+.+++.+.++..| |.+..+...|
T Consensus 179 G~lv~lvkPqfe~~~~-~-------------~---~~~G~vrd~~~-------~~~~~~~v~~~~~~~G-f~v~~~~~sp 233 (291)
T 3hp7_A 179 GQVVALVKPQFEAGRE-Q-------------I---GKNGIVRESSI-------HEKVLETVTAFAVDYG-FSVKGLDFSP 233 (291)
T ss_dssp CEEEEEECGGGTSCGG-G-------------C---C-CCCCCCHHH-------HHHHHHHHHHHHHHTT-EEEEEEEECS
T ss_pred CEEEEEECcccccChh-h-------------c---CCCCccCCHHH-------HHHHHHHHHHHHHHCC-CEEEEEEECC
Confidence 9999974110000000 0 0 01244322111 2346888999999877 9988877543
|
| >4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=97.99 E-value=3.5e-05 Score=71.48 Aligned_cols=108 Identities=12% Similarity=0.007 Sum_probs=70.7
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCc-ceeeeccC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSK-KYFATGVP 141 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~-~~f~~gvp 141 (371)
.-.+|+|+|||+|..|..+. + .... +=.||.-|.-..--..+-+...... -..+.+..
T Consensus 77 pG~~VldlG~G~G~~~~~la--------~-~VG~------------~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~ 135 (233)
T 4df3_A 77 EGDRILYLGIASGTTASHMS--------D-IIGP------------RGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDA 135 (233)
T ss_dssp TTCEEEEETCTTSHHHHHHH--------H-HHCT------------TCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCT
T ss_pred CCCEEEEecCcCCHHHHHHH--------H-HhCC------------CceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEec
Confidence 35799999999999999877 3 2221 1246666665544333333333322 34566666
Q ss_pred CCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccC
Q 017439 142 GSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPG 221 (371)
Q Consensus 142 gSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 221 (371)
+....--++.+++|++|+..+.|| .+ ..+++.-.+-||||
T Consensus 136 ~~p~~~~~~~~~vDvVf~d~~~~~---~~-------------------------------------~~~l~~~~r~LKpG 175 (233)
T 4df3_A 136 RFPEKYRHLVEGVDGLYADVAQPE---QA-------------------------------------AIVVRNARFFLRDG 175 (233)
T ss_dssp TCGGGGTTTCCCEEEEEECCCCTT---HH-------------------------------------HHHHHHHHHHEEEE
T ss_pred cCccccccccceEEEEEEeccCCh---hH-------------------------------------HHHHHHHHHhccCC
Confidence 666665678889999998766655 11 12566667889999
Q ss_pred ceEEEEecCc
Q 017439 222 GLLLLLTPTI 231 (371)
Q Consensus 222 G~lvl~~~gr 231 (371)
|++++..-.+
T Consensus 176 G~lvI~ik~r 185 (233)
T 4df3_A 176 GYMLMAIKAR 185 (233)
T ss_dssp EEEEEEEECC
T ss_pred CEEEEEEecc
Confidence 9999987444
|
| >1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43 | Back alignment and structure |
|---|
Probab=97.93 E-value=8.8e-05 Score=67.53 Aligned_cols=104 Identities=17% Similarity=0.263 Sum_probs=60.9
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC--CCcceeeecc
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP--LSKKYFATGV 140 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~--~~~~~f~~gv 140 (371)
...+|+|+|||+|..++.+... ..+++..|+-..--...=+.+. ..+--|..+.
T Consensus 41 ~~~~vLDlGcG~G~~~~~l~~~------------------------~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d 96 (252)
T 1wzn_A 41 EVRRVLDLACGTGIPTLELAER------------------------GYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGD 96 (252)
T ss_dssp CCCEEEEETCTTCHHHHHHHHT------------------------TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESC
T ss_pred CCCEEEEeCCCCCHHHHHHHHC------------------------CCeEEEEECCHHHHHHHHHHHHhcCCceEEEECC
Confidence 4579999999999998877621 1145555553322221111111 0011233332
Q ss_pred CCCcccccCCCCceeEEEecC-CccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcc
Q 017439 141 PGSFHGRLFPESSLHVAHTSN-ALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELV 219 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~-alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 219 (371)
+. .+-+++++|++++.. ++|++ +. .|...+|+.-++-|+
T Consensus 97 ---~~-~~~~~~~fD~v~~~~~~~~~~---~~---------------------------------~~~~~~l~~~~~~L~ 136 (252)
T 1wzn_A 97 ---VL-EIAFKNEFDAVTMFFSTIMYF---DE---------------------------------EDLRKLFSKVAEALK 136 (252)
T ss_dssp ---GG-GCCCCSCEEEEEECSSGGGGS---CH---------------------------------HHHHHHHHHHHHHEE
T ss_pred ---hh-hcccCCCccEEEEcCCchhcC---CH---------------------------------HHHHHHHHHHHHHcC
Confidence 22 233457899999874 44553 11 345667888889999
Q ss_pred cCceEEEEecC
Q 017439 220 PGGLLLLLTPT 230 (371)
Q Consensus 220 pGG~lvl~~~g 230 (371)
|||++++.++.
T Consensus 137 pgG~li~~~~~ 147 (252)
T 1wzn_A 137 PGGVFITDFPC 147 (252)
T ss_dssp EEEEEEEEEEC
T ss_pred CCeEEEEeccc
Confidence 99999998754
|
| >2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.93 E-value=2.9e-05 Score=68.41 Aligned_cols=121 Identities=19% Similarity=0.236 Sum_probs=71.7
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC-CcceeeeccC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL-SKKYFATGVP 141 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~-~~~~f~~gvp 141 (371)
...+|+|+|||+|..++.+. + + .+ . +++..|.-..-....=+.+.. .+--+..+..
T Consensus 42 ~~~~vLdiGcG~G~~~~~l~--------~-~----------~~---~-~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~ 98 (215)
T 2pxx_A 42 PEDRILVLGCGNSALSYELF--------L-G----------GF---P-NVTSVDYSSVVVAAMQACYAHVPQLRWETMDV 98 (215)
T ss_dssp TTCCEEEETCTTCSHHHHHH--------H-T----------TC---C-CEEEEESCHHHHHHHHHHTTTCTTCEEEECCT
T ss_pred CCCeEEEECCCCcHHHHHHH--------H-c----------CC---C-cEEEEeCCHHHHHHHHHhcccCCCcEEEEcch
Confidence 34689999999999998776 2 1 11 1 455556544332222222221 1122333332
Q ss_pred CCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccC
Q 017439 142 GSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPG 221 (371)
Q Consensus 142 gSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 221 (371)
..+ -+|++++|+|+++.++|.+..... ..|... .....|...+|+.-.+-|+||
T Consensus 99 ~~~---~~~~~~fD~v~~~~~~~~~~~~~~-------~~~~~~----------------~~~~~~~~~~l~~~~~~Lkpg 152 (215)
T 2pxx_A 99 RKL---DFPSASFDVVLEKGTLDALLAGER-------DPWTVS----------------SEGVHTVDQVLSEVSRVLVPG 152 (215)
T ss_dssp TSC---CSCSSCEEEEEEESHHHHHTTTCS-------CTTSCC----------------HHHHHHHHHHHHHHHHHEEEE
T ss_pred hcC---CCCCCcccEEEECcchhhhccccc-------cccccc----------------cchhHHHHHHHHHHHHhCcCC
Confidence 221 357889999999999877542111 111110 112356677888889999999
Q ss_pred ceEEEEecCcC
Q 017439 222 GLLLLLTPTIR 232 (371)
Q Consensus 222 G~lvl~~~gr~ 232 (371)
|++++..++.+
T Consensus 153 G~li~~~~~~~ 163 (215)
T 2pxx_A 153 GRFISMTSAAP 163 (215)
T ss_dssp EEEEEEESCCH
T ss_pred CEEEEEeCCCc
Confidence 99999987754
|
| >2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=97.92 E-value=5.6e-05 Score=66.45 Aligned_cols=55 Identities=13% Similarity=0.152 Sum_probs=36.3
Q ss_pred CCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEe
Q 017439 149 FPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLT 228 (371)
Q Consensus 149 fP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~ 228 (371)
+|++++|+++|..++||... + ..+ .+ ...+....+|+.-.+-|+|||+|++.+
T Consensus 102 ~~~~~fD~v~~~~~~~~~g~-~--~~d----------------------~~--~~~~~~~~~l~~~~~~LkpgG~lv~~~ 154 (201)
T 2plw_A 102 LQDKKIDIILSDAAVPCIGN-K--IDD----------------------HL--NSCELTLSITHFMEQYINIGGTYIVKM 154 (201)
T ss_dssp HTTCCEEEEEECCCCCCCSC-H--HHH----------------------HH--HHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCCcccEEEeCCCcCCCCC-c--ccC----------------------HH--HHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 57889999999999999421 0 001 00 001223446777778999999999976
Q ss_pred cC
Q 017439 229 PT 230 (371)
Q Consensus 229 ~g 230 (371)
..
T Consensus 155 ~~ 156 (201)
T 2plw_A 155 YL 156 (201)
T ss_dssp EC
T ss_pred eC
Confidence 54
|
| >3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae} | Back alignment and structure |
|---|
Probab=97.91 E-value=5.8e-05 Score=64.67 Aligned_cols=102 Identities=16% Similarity=0.172 Sum_probs=65.6
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CCCcceeee
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PLSKKYFAT 138 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~~~~~f~~ 138 (371)
....+|+|+|||+|..++.+. + + .| ..+++..|.-..-....=+.+ ....++++.
T Consensus 24 ~~~~~vldiG~G~G~~~~~l~--------~-~----------~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~ 81 (178)
T 3hm2_A 24 KPHETLWDIGGGSGSIAIEWL--------R-S----------TP---QTTAVCFEISEERRERILSNAINLGVSDRIAVQ 81 (178)
T ss_dssp CTTEEEEEESTTTTHHHHHHH--------T-T----------SS---SEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEE
T ss_pred cCCCeEEEeCCCCCHHHHHHH--------H-H----------CC---CCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEe
Confidence 345799999999999888776 3 2 22 347888887654433322221 112133444
Q ss_pred ccCCCcccccCCC--CceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHh
Q 017439 139 GVPGSFHGRLFPE--SSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQ 216 (371)
Q Consensus 139 gvpgSFy~rLfP~--~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~ 216 (371)
+. ..+ -+|. +++|+++++.++|| +. +|+.-.+
T Consensus 82 ~d---~~~-~~~~~~~~~D~i~~~~~~~~----~~--------------------------------------~l~~~~~ 115 (178)
T 3hm2_A 82 QG---APR-AFDDVPDNPDVIFIGGGLTA----PG--------------------------------------VFAAAWK 115 (178)
T ss_dssp CC---TTG-GGGGCCSCCSEEEECC-TTC----TT--------------------------------------HHHHHHH
T ss_pred cc---hHh-hhhccCCCCCEEEECCcccH----HH--------------------------------------HHHHHHH
Confidence 33 222 3444 89999999999988 21 5667778
Q ss_pred hcccCceEEEEecCc
Q 017439 217 ELVPGGLLLLLTPTI 231 (371)
Q Consensus 217 EL~pGG~lvl~~~gr 231 (371)
-|+|||++++.....
T Consensus 116 ~L~~gG~l~~~~~~~ 130 (178)
T 3hm2_A 116 RLPVGGRLVANAVTV 130 (178)
T ss_dssp TCCTTCEEEEEECSH
T ss_pred hcCCCCEEEEEeecc
Confidence 999999999887654
|
| >2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53 | Back alignment and structure |
|---|
Probab=97.90 E-value=6.2e-05 Score=67.80 Aligned_cols=112 Identities=13% Similarity=0.137 Sum_probs=63.5
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CCCcceeeecc
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PLSKKYFATGV 140 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~~~~~f~~gv 140 (371)
.-+|+|+|||+|..++.+.. + .| ..+++.-|.-..--...-+.+ ...+--|+.+.
T Consensus 39 ~~~vLDiGcG~G~~~~~la~---------~----------~p---~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d 96 (213)
T 2fca_A 39 NPIHIEVGTGKGQFISGMAK---------Q----------NP---DINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNID 96 (213)
T ss_dssp CCEEEEECCTTSHHHHHHHH---------H----------CT---TSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCC
T ss_pred CceEEEEecCCCHHHHHHHH---------H----------CC---CCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCC
Confidence 46899999999999988762 1 12 234555555443322211111 00111233332
Q ss_pred CCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc
Q 017439 141 PGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP 220 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 220 (371)
-.. ....+|++++|.++++.+.+|..+.-. +.++ ....||+.-++-|+|
T Consensus 97 ~~~-l~~~~~~~~~d~v~~~~~~p~~~~~~~-----------~~rl-------------------~~~~~l~~~~~~Lkp 145 (213)
T 2fca_A 97 ADT-LTDVFEPGEVKRVYLNFSDPWPKKRHE-----------KRRL-------------------TYSHFLKKYEEVMGK 145 (213)
T ss_dssp GGG-HHHHCCTTSCCEEEEESCCCCCSGGGG-----------GGST-------------------TSHHHHHHHHHHHTT
T ss_pred HHH-HHhhcCcCCcCEEEEECCCCCcCcccc-----------cccc-------------------CcHHHHHHHHHHcCC
Confidence 111 123478899999999888888432100 0000 013467777789999
Q ss_pred CceEEEEe
Q 017439 221 GGLLLLLT 228 (371)
Q Consensus 221 GG~lvl~~ 228 (371)
||++++..
T Consensus 146 gG~l~~~t 153 (213)
T 2fca_A 146 GGSIHFKT 153 (213)
T ss_dssp SCEEEEEE
T ss_pred CCEEEEEe
Confidence 99999876
|
| >3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=97.89 E-value=9.5e-05 Score=66.43 Aligned_cols=105 Identities=13% Similarity=0.199 Sum_probs=62.9
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPG 142 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpg 142 (371)
...+|+|+|||+|..+..+.... . +++..|+...--...-+.++ +--|..+.
T Consensus 40 ~~~~vLdiG~G~G~~~~~l~~~~-----------------------~-~v~~~D~s~~~~~~a~~~~~--~~~~~~~d-- 91 (239)
T 3bxo_A 40 EASSLLDVACGTGTHLEHFTKEF-----------------------G-DTAGLELSEDMLTHARKRLP--DATLHQGD-- 91 (239)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHH-----------------------S-EEEEEESCHHHHHHHHHHCT--TCEEEECC--
T ss_pred CCCeEEEecccCCHHHHHHHHhC-----------------------C-cEEEEeCCHHHHHHHHHhCC--CCEEEECC--
Confidence 34699999999999988776321 0 24444443222111111111 11223332
Q ss_pred CcccccCCCCceeEEEe-cCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccC
Q 017439 143 SFHGRLFPESSLHVAHT-SNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPG 221 (371)
Q Consensus 143 SFy~rLfP~~Svd~~~S-s~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 221 (371)
+. .+.+++++|+++| ..++||+.. | +|+..+|+.-++-|+||
T Consensus 92 -~~-~~~~~~~~D~v~~~~~~~~~~~~-~----------------------------------~~~~~~l~~~~~~L~pg 134 (239)
T 3bxo_A 92 -MR-DFRLGRKFSAVVSMFSSVGYLKT-T----------------------------------EELGAAVASFAEHLEPG 134 (239)
T ss_dssp -TT-TCCCSSCEEEEEECTTGGGGCCS-H----------------------------------HHHHHHHHHHHHTEEEE
T ss_pred -HH-HcccCCCCcEEEEcCchHhhcCC-H----------------------------------HHHHHHHHHHHHhcCCC
Confidence 11 2223678999995 459999533 1 34566888889999999
Q ss_pred ceEEEEecCcC
Q 017439 222 GLLLLLTPTIR 232 (371)
Q Consensus 222 G~lvl~~~gr~ 232 (371)
|++++.....+
T Consensus 135 G~l~~~~~~~~ 145 (239)
T 3bxo_A 135 GVVVVEPWWFP 145 (239)
T ss_dssp EEEEECCCCCT
T ss_pred eEEEEEeccCc
Confidence 99999875544
|
| >3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp} | Back alignment and structure |
|---|
Probab=97.88 E-value=2.8e-05 Score=68.86 Aligned_cols=19 Identities=26% Similarity=0.441 Sum_probs=16.1
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~ 82 (371)
..+|+|+|||+|..++.+.
T Consensus 61 ~~~vLDiG~G~G~~~~~l~ 79 (205)
T 3grz_A 61 PLTVADVGTGSGILAIAAH 79 (205)
T ss_dssp CCEEEEETCTTSHHHHHHH
T ss_pred CCEEEEECCCCCHHHHHHH
Confidence 4699999999998887754
|
| >3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.88 E-value=4.1e-05 Score=67.89 Aligned_cols=20 Identities=20% Similarity=0.371 Sum_probs=17.5
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~ 82 (371)
...+|+|+|||+|..+..+.
T Consensus 77 ~~~~vLdiG~G~G~~~~~la 96 (210)
T 3lbf_A 77 PQSRVLEIGTGSGYQTAILA 96 (210)
T ss_dssp TTCEEEEECCTTSHHHHHHH
T ss_pred CCCEEEEEcCCCCHHHHHHH
Confidence 45799999999999998776
|
| >1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A* | Back alignment and structure |
|---|
Probab=97.87 E-value=2.7e-05 Score=65.86 Aligned_cols=113 Identities=14% Similarity=0.077 Sum_probs=67.3
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPG 142 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpg 142 (371)
...+|+|+|||+|..+..+. + ++. | ..+++..|+.. - -. + .+--+..+...
T Consensus 22 ~~~~vLd~G~G~G~~~~~l~--------~-~~~---------~---~~~v~~~D~~~-~-~~----~--~~~~~~~~d~~ 72 (180)
T 1ej0_A 22 PGMTVVDLGAAPGGWSQYVV--------T-QIG---------G---KGRIIACDLLP-M-DP----I--VGVDFLQGDFR 72 (180)
T ss_dssp TTCEEEEESCTTCHHHHHHH--------H-HHC---------T---TCEEEEEESSC-C-CC----C--TTEEEEESCTT
T ss_pred CCCeEEEeCCCCCHHHHHHH--------H-HhC---------C---CCeEEEEECcc-c-cc----c--CcEEEEEcccc
Confidence 34699999999999888776 2 221 1 23566666544 1 11 1 12223333321
Q ss_pred Cc-----ccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 143 SF-----HGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 143 SF-----y~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
.. ..+.+|++++|+++++..+||...... + .. ........+|+.-.+-
T Consensus 73 ~~~~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~---~-------------------~~-----~~~~~~~~~l~~~~~~ 125 (180)
T 1ej0_A 73 DELVMKALLERVGDSKVQVVMSDMAPNMSGTPAV---D-------------------IP-----RAMYLVELALEMCRDV 125 (180)
T ss_dssp SHHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHH---H-------------------HH-----HHHHHHHHHHHHHHHH
T ss_pred cchhhhhhhccCCCCceeEEEECCCccccCCCcc---c-------------------hH-----HHHHHHHHHHHHHHHH
Confidence 11 011167889999999999999544211 0 00 0112235678888889
Q ss_pred cccCceEEEEecCc
Q 017439 218 LVPGGLLLLLTPTI 231 (371)
Q Consensus 218 L~pGG~lvl~~~gr 231 (371)
|+|||++++.....
T Consensus 126 L~~gG~l~~~~~~~ 139 (180)
T 1ej0_A 126 LAPGGSFVVKVFQG 139 (180)
T ss_dssp EEEEEEEEEEEESS
T ss_pred cCCCcEEEEEEecC
Confidence 99999999987654
|
| >1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4 | Back alignment and structure |
|---|
Probab=97.87 E-value=0.0001 Score=63.53 Aligned_cols=104 Identities=13% Similarity=0.110 Sum_probs=63.0
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CCCc--ceee
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PLSK--KYFA 137 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~~~--~~f~ 137 (371)
...+|+|+|||+|..++.+... ..+++..|+-..-....=+.+ .... -.+.
T Consensus 52 ~~~~vLdiG~G~G~~~~~~~~~------------------------~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~ 107 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIALADE------------------------VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVV 107 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHGGG------------------------SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHc------------------------CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEE
Confidence 4569999999999988876621 013444444332211111111 1010 1222
Q ss_pred eccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 138 TGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 138 ~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
.+. +.. .++++++|+++++..+|| . ..++..+|+.-.+-
T Consensus 108 ~~d---~~~-~~~~~~~D~v~~~~~~~~----~---------------------------------~~~~~~~l~~~~~~ 146 (194)
T 1dus_A 108 HSD---LYE-NVKDRKYNKIITNPPIRA----G---------------------------------KEVLHRIIEEGKEL 146 (194)
T ss_dssp ECS---TTT-TCTTSCEEEEEECCCSTT----C---------------------------------HHHHHHHHHHHHHH
T ss_pred ECc---hhc-ccccCCceEEEECCCccc----c---------------------------------hhHHHHHHHHHHHH
Confidence 222 222 345788999999988887 1 13455678888899
Q ss_pred cccCceEEEEecCc
Q 017439 218 LVPGGLLLLLTPTI 231 (371)
Q Consensus 218 L~pGG~lvl~~~gr 231 (371)
|+|||++++.....
T Consensus 147 L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 147 LKDNGEIWVVIQTK 160 (194)
T ss_dssp EEEEEEEEEEEEST
T ss_pred cCCCCEEEEEECCC
Confidence 99999999998664
|
| >3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A* | Back alignment and structure |
|---|
Probab=97.86 E-value=4.1e-05 Score=66.53 Aligned_cols=20 Identities=15% Similarity=0.140 Sum_probs=17.5
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~ 82 (371)
..-+|+|+|||+|..|+.+.
T Consensus 22 ~~~~vLDiGcG~G~~~~~la 41 (185)
T 3mti_A 22 DESIVVDATMGNGNDTAFLA 41 (185)
T ss_dssp TTCEEEESCCTTSHHHHHHH
T ss_pred CCCEEEEEcCCCCHHHHHHH
Confidence 34689999999999999877
|
| >3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A* | Back alignment and structure |
|---|
Probab=97.85 E-value=0.00015 Score=71.76 Aligned_cols=106 Identities=19% Similarity=0.210 Sum_probs=66.5
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC--Ccceeeecc
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL--SKKYFATGV 140 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~--~~~~f~~gv 140 (371)
...+|+|+|||+|..++.+... ..+|+..|.-..--...=+.+.. ..--|..+
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~------------------------g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~- 287 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARM------------------------GAEVVGVEDDLASVLSLQKGLEANALKAQALHS- 287 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHT------------------------TCEEEEEESBHHHHHHHHHHHHHTTCCCEEEEC-
T ss_pred CCCEEEEEeeeCCHHHHHHHHc------------------------CCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEc-
Confidence 4579999999999999988721 01455555433222111111110 01122222
Q ss_pred CCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc
Q 017439 141 PGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP 220 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 220 (371)
.+..-+.+++++|+|+|+..+||...... .+...||+.-.+-|+|
T Consensus 288 --D~~~~~~~~~~fD~Ii~npp~~~~~~~~~---------------------------------~~~~~~l~~~~~~Lkp 332 (381)
T 3dmg_A 288 --DVDEALTEEARFDIIVTNPPFHVGGAVIL---------------------------------DVAQAFVNVAAARLRP 332 (381)
T ss_dssp --STTTTSCTTCCEEEEEECCCCCTTCSSCC---------------------------------HHHHHHHHHHHHHEEE
T ss_pred --chhhccccCCCeEEEEECCchhhcccccH---------------------------------HHHHHHHHHHHHhcCc
Confidence 33444455689999999999998544331 4556688888899999
Q ss_pred CceEEEEe
Q 017439 221 GGLLLLLT 228 (371)
Q Consensus 221 GG~lvl~~ 228 (371)
||+++++.
T Consensus 333 GG~l~iv~ 340 (381)
T 3dmg_A 333 GGVFFLVS 340 (381)
T ss_dssp EEEEEEEE
T ss_pred CcEEEEEE
Confidence 99999986
|
| >3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A* | Back alignment and structure |
|---|
Probab=97.85 E-value=1.5e-05 Score=72.60 Aligned_cols=114 Identities=17% Similarity=0.218 Sum_probs=70.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CCCcceeeec
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PLSKKYFATG 139 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~~~~~f~~g 139 (371)
..-+|+|+|||+|..++.+. + + .| ...|+.-|.-.+--...-+.+ ...+-.|..+
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA--------~-~----------~p---~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~ 91 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMA--------K-D----------RP---EQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCH 91 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHH--------H-H----------CT---TSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECS
T ss_pred CCCeEEEEeeeChHHHHHHH--------H-H----------CC---CCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEEC
Confidence 45689999999999988776 2 1 22 346777777655433332222 1112234445
Q ss_pred cCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcc
Q 017439 140 VPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELV 219 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 219 (371)
....+....+|++|+|.+++++...|-.+.. . +.++. . ..||+.-++-|+
T Consensus 92 Da~~~l~~~~~~~~~d~v~~~~~~p~~~~~~----~-------~rr~~----~---------------~~~l~~~~r~Lk 141 (218)
T 3dxy_A 92 DAVEVLHKMIPDNSLRMVQLFFPDPWHKARH----N-------KRRIV----Q---------------VPFAELVKSKLQ 141 (218)
T ss_dssp CHHHHHHHHSCTTCEEEEEEESCCCCCSGGG----G-------GGSSC----S---------------HHHHHHHHHHEE
T ss_pred CHHHHHHHHcCCCChheEEEeCCCCccchhh----h-------hhhhh----h---------------HHHHHHHHHHcC
Confidence 4333344458999999999999999932211 0 00010 0 136777788999
Q ss_pred cCceEEEEe
Q 017439 220 PGGLLLLLT 228 (371)
Q Consensus 220 pGG~lvl~~ 228 (371)
|||++++..
T Consensus 142 pGG~l~i~t 150 (218)
T 3dxy_A 142 LGGVFHMAT 150 (218)
T ss_dssp EEEEEEEEE
T ss_pred CCcEEEEEe
Confidence 999999877
|
| >3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=97.85 E-value=5.3e-05 Score=71.35 Aligned_cols=100 Identities=11% Similarity=-0.008 Sum_probs=59.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPG 142 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpg 142 (371)
...+|+|+|||+|..|+.+.. + -.+|...|+-.+--...=+.+... + +.+
T Consensus 45 ~g~~VLDlGcGtG~~a~~La~---------~---------------g~~V~gvD~S~~ml~~Ar~~~~~~---~---v~~ 94 (261)
T 3iv6_A 45 PGSTVAVIGASTRFLIEKALE---------R---------------GASVTVFDFSQRMCDDLAEALADR---C---VTI 94 (261)
T ss_dssp TTCEEEEECTTCHHHHHHHHH---------T---------------TCEEEEEESCHHHHHHHHHHTSSS---C---CEE
T ss_pred CcCEEEEEeCcchHHHHHHHh---------c---------------CCEEEEEECCHHHHHHHHHHHHhc---c---cee
Confidence 457999999999999988772 1 013555555443322222222211 1 111
Q ss_pred Ccccc-----cCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 143 SFHGR-----LFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 143 SFy~r-----LfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
.+..- -.+++++|+++|+.++||+ +. +|....|+.-++-
T Consensus 95 ~~~~~~~~~~~~~~~~fD~Vv~~~~l~~~---~~---------------------------------~~~~~~l~~l~~l 138 (261)
T 3iv6_A 95 DLLDITAEIPKELAGHFDFVLNDRLINRF---TT---------------------------------EEARRACLGMLSL 138 (261)
T ss_dssp EECCTTSCCCGGGTTCCSEEEEESCGGGS---CH---------------------------------HHHHHHHHHHHHH
T ss_pred eeeecccccccccCCCccEEEEhhhhHhC---CH---------------------------------HHHHHHHHHHHHh
Confidence 11110 0125789999999999985 21 2344456666677
Q ss_pred cccCceEEEEec
Q 017439 218 LVPGGLLLLLTP 229 (371)
Q Consensus 218 L~pGG~lvl~~~ 229 (371)
| |||++++.+.
T Consensus 139 L-PGG~l~lS~~ 149 (261)
T 3iv6_A 139 V-GSGTVRASVK 149 (261)
T ss_dssp H-TTSEEEEEEE
T ss_pred C-cCcEEEEEec
Confidence 8 9999999874
|
| >3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A* | Back alignment and structure |
|---|
Probab=97.81 E-value=3.3e-05 Score=75.19 Aligned_cols=99 Identities=18% Similarity=0.161 Sum_probs=63.2
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC----CC-Ccceeee
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV----PL-SKKYFAT 138 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l----~~-~~~~f~~ 138 (371)
..+|+|+|||+|..++.+. + . + .-+|+.-|+. . .-...+.. .- .+--|..
T Consensus 67 ~~~VLDvGcG~G~~~~~la--------~-~-----------g---~~~v~gvD~s-~-~l~~a~~~~~~~~~~~~v~~~~ 121 (349)
T 3q7e_A 67 DKVVLDVGSGTGILCMFAA--------K-A-----------G---ARKVIGIECS-S-ISDYAVKIVKANKLDHVVTIIK 121 (349)
T ss_dssp TCEEEEESCTTSHHHHHHH--------H-T-----------T---CSEEEEEECS-T-HHHHHHHHHHHTTCTTTEEEEE
T ss_pred CCEEEEEeccchHHHHHHH--------H-C-----------C---CCEEEEECcH-H-HHHHHHHHHHHcCCCCcEEEEE
Confidence 4689999999999888776 2 1 1 1267777776 3 22222221 11 1123444
Q ss_pred ccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 139 GVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 139 gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
+. ..+--+|.+++|+++|....+++... .++..+|+.+.+-|
T Consensus 122 ~d---~~~~~~~~~~fD~Iis~~~~~~l~~~-----------------------------------~~~~~~l~~~~r~L 163 (349)
T 3q7e_A 122 GK---VEEVELPVEKVDIIISEWMGYCLFYE-----------------------------------SMLNTVLHARDKWL 163 (349)
T ss_dssp SC---TTTCCCSSSCEEEEEECCCBBTBTBT-----------------------------------CCHHHHHHHHHHHE
T ss_pred Cc---HHHccCCCCceEEEEEccccccccCc-----------------------------------hhHHHHHHHHHHhC
Confidence 43 22224678999999998766654332 23456899999999
Q ss_pred ccCceEE
Q 017439 219 VPGGLLL 225 (371)
Q Consensus 219 ~pGG~lv 225 (371)
+|||+|+
T Consensus 164 kpgG~li 170 (349)
T 3q7e_A 164 APDGLIF 170 (349)
T ss_dssp EEEEEEE
T ss_pred CCCCEEc
Confidence 9999997
|
| >3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=97.80 E-value=0.00013 Score=63.72 Aligned_cols=110 Identities=14% Similarity=0.142 Sum_probs=62.6
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CCCcceeeec
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PLSKKYFATG 139 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~~~~~f~~g 139 (371)
..-+|+|+|||+|..++.+++ . + .-+|+..|+-..--...=+.+ .-.+--|..+
T Consensus 44 ~~~~vLDlgcG~G~~~~~~~~-------~-------------~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~ 100 (189)
T 3p9n_A 44 TGLAVLDLYAGSGALGLEALS-------R-------------G---AASVLFVESDQRSAAVIARNIEALGLSGATLRRG 100 (189)
T ss_dssp TTCEEEEETCTTCHHHHHHHH-------T-------------T---CSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEES
T ss_pred CCCEEEEeCCCcCHHHHHHHH-------C-------------C---CCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEc
Confidence 346899999999999987662 1 0 114555555433222111111 0011123333
Q ss_pred cCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHh--h
Q 017439 140 VPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQ--E 217 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~--E 217 (371)
.-..+-. -++++++|+++++..+||. . .|+..+|+.-.+ -
T Consensus 101 d~~~~~~-~~~~~~fD~i~~~~p~~~~---~----------------------------------~~~~~~l~~~~~~~~ 142 (189)
T 3p9n_A 101 AVAAVVA-AGTTSPVDLVLADPPYNVD---S----------------------------------ADVDAILAALGTNGW 142 (189)
T ss_dssp CHHHHHH-HCCSSCCSEEEECCCTTSC---H----------------------------------HHHHHHHHHHHHSSS
T ss_pred cHHHHHh-hccCCCccEEEECCCCCcc---h----------------------------------hhHHHHHHHHHhcCc
Confidence 3111111 1357899999998887772 1 233445665555 8
Q ss_pred cccCceEEEEecCcCC
Q 017439 218 LVPGGLLLLLTPTIRD 233 (371)
Q Consensus 218 L~pGG~lvl~~~gr~~ 233 (371)
|+|||++++....+..
T Consensus 143 L~pgG~l~~~~~~~~~ 158 (189)
T 3p9n_A 143 TREGTVAVVERATTCA 158 (189)
T ss_dssp CCTTCEEEEEEETTSC
T ss_pred cCCCeEEEEEecCCCC
Confidence 9999999998876543
|
| >3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.78 E-value=0.0001 Score=72.43 Aligned_cols=103 Identities=14% Similarity=0.105 Sum_probs=65.6
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC-C---C-Cccee
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV-P---L-SKKYF 136 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l-~---~-~~~~f 136 (371)
.+..+|+|+|||+|..++.+. + + + . -+|+..|.. +- -...+.. . - .+--|
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la--------~-~----g-----~-----~~V~gvD~s-~~-~~~a~~~~~~~~~~~~v~~ 116 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSA--------Q-A----G-----A-----RKVYAVEAT-KM-ADHARALVKANNLDHIVEV 116 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHH--------H-T----T-----C-----SEEEEEESS-TT-HHHHHHHHHHTTCTTTEEE
T ss_pred CCCCEEEEeccCcCHHHHHHH--------h-c----C-----C-----CEEEEEccH-HH-HHHHHHHHHHcCCCCeEEE
Confidence 345799999999999888766 2 1 1 1 167888876 32 2222221 1 1 11234
Q ss_pred eeccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHh
Q 017439 137 ATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQ 216 (371)
Q Consensus 137 ~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~ 216 (371)
..+. ...+-+++++|+++|....|++... .++..+|+.+.+
T Consensus 117 ~~~d----~~~~~~~~~~D~Iv~~~~~~~l~~e-----------------------------------~~~~~~l~~~~~ 157 (376)
T 3r0q_C 117 IEGS----VEDISLPEKVDVIISEWMGYFLLRE-----------------------------------SMFDSVISARDR 157 (376)
T ss_dssp EESC----GGGCCCSSCEEEEEECCCBTTBTTT-----------------------------------CTHHHHHHHHHH
T ss_pred EECc----hhhcCcCCcceEEEEcChhhcccch-----------------------------------HHHHHHHHHHHh
Confidence 4443 2333333899999998777775431 245568999999
Q ss_pred hcccCceEEEEe
Q 017439 217 ELVPGGLLLLLT 228 (371)
Q Consensus 217 EL~pGG~lvl~~ 228 (371)
-|+|||+|++.-
T Consensus 158 ~LkpgG~li~~~ 169 (376)
T 3r0q_C 158 WLKPTGVMYPSH 169 (376)
T ss_dssp HEEEEEEEESSE
T ss_pred hCCCCeEEEEec
Confidence 999999997654
|
| >3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E* | Back alignment and structure |
|---|
Probab=97.75 E-value=0.00014 Score=67.36 Aligned_cols=114 Identities=10% Similarity=-0.028 Sum_probs=60.0
Q ss_pred cceecccCCCCCCchHHhhHHHHHHHHHHHHHHHHHHHhhcc-cccccCCCCCceEEeeecCCCCcccHHHHHHHHHHHH
Q 017439 12 PEAYPMVGGDGPHSYAKNSIYQEAIVNGSKGMIAAGIRKTLD-LKSLRLDTSSTFKIADLGCSTGPNTFIAMQNIIEAIE 90 (371)
Q Consensus 12 ~~~~~M~gG~g~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~-~~~~~~~~~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~ 90 (371)
++...++|. .|......|.+........ ++ +. .....+|+|+|||+|..|..+.
T Consensus 41 e~~~~~~~~----~yr~w~~~~skla~~ll~~--------l~~~~-----l~~g~~VLDlG~GtG~~t~~la-------- 95 (232)
T 3id6_C 41 ERLIKYEGV----EYREWNAFRSKLAGAILKG--------LKTNP-----IRKGTKVLYLGAASGTTISHVS-------- 95 (232)
T ss_dssp CCEEEETTE----EEEECCTTTCHHHHHHHTT--------CSCCS-----CCTTCEEEEETCTTSHHHHHHH--------
T ss_pred ceeeeecCc----chhhhchHHHHHHHHHHhh--------hhhcC-----CCCCCEEEEEeecCCHHHHHHH--------
Confidence 334445543 3877788888765533222 22 11 2335899999999999888776
Q ss_pred hhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC-CCcceeeeccCCCcccccCCCCceeEEEecCCc
Q 017439 91 LIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP-LSKKYFATGVPGSFHGRLFPESSLHVAHTSNAL 163 (371)
Q Consensus 91 ~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~-~~~~~f~~gvpgSFy~rLfP~~Svd~~~Ss~al 163 (371)
+ ... | .-+|+..|+-...-..|.+... ..+-.++.+............+++|+++|..+.
T Consensus 96 ~-~v~---------~---~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~~~D~I~~d~a~ 156 (232)
T 3id6_C 96 D-IIE---------L---NGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYVDIAQ 156 (232)
T ss_dssp H-HHT---------T---TSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCEEEEEECCCC
T ss_pred H-HhC---------C---CCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhhccccceEEEEecCCC
Confidence 2 111 1 1257777765542211111100 012234444433211111224689999998764
|
| >2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A* | Back alignment and structure |
|---|
Probab=97.73 E-value=8.6e-05 Score=72.05 Aligned_cols=100 Identities=20% Similarity=0.208 Sum_probs=59.6
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhc-C---CC-Ccceee
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKS-V---PL-SKKYFA 137 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~-l---~~-~~~~f~ 137 (371)
+.-+|+|+|||+|..++.+. + . + .-+|+..|... .-...+. + .- .+--+.
T Consensus 64 ~~~~VLDiGcGtG~ls~~la--------~-~-----------g---~~~v~gvD~s~--~~~~a~~~~~~~~~~~~i~~~ 118 (340)
T 2fyt_A 64 KDKVVLDVGCGTGILSMFAA--------K-A-----------G---AKKVLGVDQSE--ILYQAMDIIRLNKLEDTITLI 118 (340)
T ss_dssp TTCEEEEETCTTSHHHHHHH--------H-T-----------T---CSEEEEEESST--HHHHHHHHHHHTTCTTTEEEE
T ss_pred CCCEEEEeeccCcHHHHHHH--------H-c-----------C---CCEEEEEChHH--HHHHHHHHHHHcCCCCcEEEE
Confidence 34699999999999887665 2 1 0 12577777652 2222221 1 11 122233
Q ss_pred eccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 138 TGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 138 ~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
.+. ..+--+|++++|+++|....+-+.. ..++..+|+.+.+-
T Consensus 119 ~~d---~~~~~~~~~~~D~Ivs~~~~~~l~~-----------------------------------~~~~~~~l~~~~~~ 160 (340)
T 2fyt_A 119 KGK---IEEVHLPVEKVDVIISEWMGYFLLF-----------------------------------ESMLDSVLYAKNKY 160 (340)
T ss_dssp ESC---TTTSCCSCSCEEEEEECCCBTTBTT-----------------------------------TCHHHHHHHHHHHH
T ss_pred Eee---HHHhcCCCCcEEEEEEcCchhhccC-----------------------------------HHHHHHHHHHHHhh
Confidence 333 2222367789999999752211111 13455689999999
Q ss_pred cccCceEE
Q 017439 218 LVPGGLLL 225 (371)
Q Consensus 218 L~pGG~lv 225 (371)
|+|||+++
T Consensus 161 LkpgG~li 168 (340)
T 2fyt_A 161 LAKGGSVY 168 (340)
T ss_dssp EEEEEEEE
T ss_pred cCCCcEEE
Confidence 99999998
|
| >1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A* | Back alignment and structure |
|---|
Probab=97.72 E-value=7.6e-05 Score=67.80 Aligned_cols=107 Identities=13% Similarity=0.138 Sum_probs=62.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC--CCcceeeecc
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP--LSKKYFATGV 140 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~--~~~~~f~~gv 140 (371)
...+|+|+|||+|..+..+. + . .+ . +|+..|+-.+-....=+... ..+--|..+.
T Consensus 60 ~~~~vLDiGcGtG~~~~~l~--------~--~---------~~---~-~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d 116 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASKVQ--------E--A---------PI---D-EHWIIECNDGVFQRLRDWAPRQTHKVIPLKGL 116 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHH--------T--S---------CE---E-EEEEEECCHHHHHHHHHHGGGCSSEEEEEESC
T ss_pred CCCeEEEEeccCCHHHHHHH--------h--c---------CC---C-eEEEEcCCHHHHHHHHHHHHhcCCCeEEEecC
Confidence 35799999999999887665 2 1 11 2 56666665443222211111 1112233333
Q ss_pred CCCcccc--cCCCCceeEEEe-cCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 141 PGSFHGR--LFPESSLHVAHT-SNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 141 pgSFy~r--LfP~~Svd~~~S-s~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
+.+- -+|++++|+|++ .+++++ .... ..++..+|+.-++-
T Consensus 117 ---~~~~~~~~~~~~fD~V~~d~~~~~~-~~~~---------------------------------~~~~~~~l~~~~r~ 159 (236)
T 1zx0_A 117 ---WEDVAPTLPDGHFDGILYDTYPLSE-ETWH---------------------------------THQFNFIKNHAFRL 159 (236)
T ss_dssp ---HHHHGGGSCTTCEEEEEECCCCCBG-GGTT---------------------------------THHHHHHHHTHHHH
T ss_pred ---HHHhhcccCCCceEEEEECCcccch-hhhh---------------------------------hhhHHHHHHHHHHh
Confidence 2221 267899999999 666532 1111 13445578888889
Q ss_pred cccCceEEEEec
Q 017439 218 LVPGGLLLLLTP 229 (371)
Q Consensus 218 L~pGG~lvl~~~ 229 (371)
|+|||+|++...
T Consensus 160 LkpgG~l~~~~~ 171 (236)
T 1zx0_A 160 LKPGGVLTYCNL 171 (236)
T ss_dssp EEEEEEEEECCH
T ss_pred cCCCeEEEEEec
Confidence 999999987653
|
| >1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33 | Back alignment and structure |
|---|
Probab=97.70 E-value=0.00041 Score=63.88 Aligned_cols=98 Identities=26% Similarity=0.324 Sum_probs=59.3
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPG 142 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpg 142 (371)
...+|+|+|||+|..+..+. + .+ | ..+++..|.-.+--...-+..+ +-.|..+.
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~--------~-~~----------~---~~~v~~vD~s~~~~~~a~~~~~--~~~~~~~d-- 138 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFA--------D-AL----------P---EITTFGLDVSKVAIKAAAKRYP--QVTFCVAS-- 138 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHH--------H-TC----------T---TSEEEEEESCHHHHHHHHHHCT--TSEEEECC--
T ss_pred CCCEEEEECCCCCHHHHHHH--------H-hC----------C---CCeEEEEeCCHHHHHHHHHhCC--CcEEEEcc--
Confidence 45799999999999998776 3 21 1 2256667765433222211111 11233333
Q ss_pred CcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCc
Q 017439 143 SFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGG 222 (371)
Q Consensus 143 SFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 222 (371)
+..--++++++|+++++.+ |. +|+.-.+-|+|||
T Consensus 139 -~~~~~~~~~~fD~v~~~~~-------~~--------------------------------------~l~~~~~~L~pgG 172 (269)
T 1p91_A 139 -SHRLPFSDTSMDAIIRIYA-------PC--------------------------------------KAEELARVVKPGG 172 (269)
T ss_dssp -TTSCSBCTTCEEEEEEESC-------CC--------------------------------------CHHHHHHHEEEEE
T ss_pred -hhhCCCCCCceeEEEEeCC-------hh--------------------------------------hHHHHHHhcCCCc
Confidence 2222257889999998654 21 2444456799999
Q ss_pred eEEEEecCcC
Q 017439 223 LLLLLTPTIR 232 (371)
Q Consensus 223 ~lvl~~~gr~ 232 (371)
++++..++.+
T Consensus 173 ~l~~~~~~~~ 182 (269)
T 1p91_A 173 WVITATPGPR 182 (269)
T ss_dssp EEEEEEECTT
T ss_pred EEEEEEcCHH
Confidence 9999987654
|
| >3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=97.68 E-value=0.0003 Score=63.14 Aligned_cols=124 Identities=15% Similarity=0.106 Sum_probs=61.7
Q ss_pred CceEEeeecCC-CCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC--Ccceeeec
Q 017439 63 STFKIADLGCS-TGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL--SKKYFATG 139 (371)
Q Consensus 63 ~~~~IaDlGCs-~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~--~~~~f~~g 139 (371)
...+|+|+||| +|..++.+.... ..+|+..|.-..-....=+.+.. .+--+..+
T Consensus 55 ~~~~vLDlG~G~~G~~~~~la~~~-----------------------~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~ 111 (230)
T 3evz_A 55 GGEVALEIGTGHTAMMALMAEKFF-----------------------NCKVTATEVDEEFFEYARRNIERNNSNVRLVKS 111 (230)
T ss_dssp SSCEEEEECCTTTCHHHHHHHHHH-----------------------CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEEC
T ss_pred CCCEEEEcCCCHHHHHHHHHHHhc-----------------------CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeC
Confidence 45799999999 999998776321 01344444433221111111100 01122222
Q ss_pred cCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcc
Q 017439 140 VPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELV 219 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 219 (371)
.... .. -+|++++|+++++-.+||..... +.+. ..++..+ .. ...+...||+.-.+-|+
T Consensus 112 d~~~-~~-~~~~~~fD~I~~npp~~~~~~~~--~~~~-~~~~~~~-----~~-----------~~~~~~~~l~~~~~~Lk 170 (230)
T 3evz_A 112 NGGI-IK-GVVEGTFDVIFSAPPYYDKPLGR--VLTE-REAIGGG-----KY-----------GEEFSVKLLEEAFDHLN 170 (230)
T ss_dssp SSCS-ST-TTCCSCEEEEEECCCCC------------------CC-----SS-----------SCHHHHHHHHHHGGGEE
T ss_pred Cchh-hh-hcccCceeEEEECCCCcCCcccc--ccCh-hhhhccC-----cc-----------chHHHHHHHHHHHHHhC
Confidence 2111 11 23568999999998888855411 1110 0001000 00 01234568888889999
Q ss_pred cCceEEEEecC
Q 017439 220 PGGLLLLLTPT 230 (371)
Q Consensus 220 pGG~lvl~~~g 230 (371)
|||++++.+..
T Consensus 171 pgG~l~~~~~~ 181 (230)
T 3evz_A 171 PGGKVALYLPD 181 (230)
T ss_dssp EEEEEEEEEES
T ss_pred CCeEEEEEecc
Confidence 99999998643
|
| >1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6 | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00024 Score=68.39 Aligned_cols=99 Identities=22% Similarity=0.276 Sum_probs=59.7
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC----CC-Ccceeee
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV----PL-SKKYFAT 138 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l----~~-~~~~f~~ 138 (371)
..+|+|+|||+|..++.+. + . + .-+|+..|.. . .-...+.. .- .+--+..
T Consensus 39 ~~~VLDiGcGtG~ls~~la--------~-~-----------g---~~~v~~vD~s-~-~~~~a~~~~~~~~~~~~i~~~~ 93 (328)
T 1g6q_1 39 DKIVLDVGCGTGILSMFAA--------K-H-----------G---AKHVIGVDMS-S-IIEMAKELVELNGFSDKITLLR 93 (328)
T ss_dssp TCEEEEETCTTSHHHHHHH--------H-T-----------C---CSEEEEEESS-T-HHHHHHHHHHHTTCTTTEEEEE
T ss_pred CCEEEEecCccHHHHHHHH--------H-C-----------C---CCEEEEEChH-H-HHHHHHHHHHHcCCCCCEEEEE
Confidence 3599999999999887665 2 1 1 1257777775 2 22222221 11 1122333
Q ss_pred ccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 139 GVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 139 gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
+. +-+--+|.+++|+++|....+.+.. ..++..+|+.+.+-|
T Consensus 94 ~d---~~~~~~~~~~~D~Ivs~~~~~~l~~-----------------------------------~~~~~~~l~~~~~~L 135 (328)
T 1g6q_1 94 GK---LEDVHLPFPKVDIIISEWMGYFLLY-----------------------------------ESMMDTVLYARDHYL 135 (328)
T ss_dssp SC---TTTSCCSSSCEEEEEECCCBTTBST-----------------------------------TCCHHHHHHHHHHHE
T ss_pred Cc---hhhccCCCCcccEEEEeCchhhccc-----------------------------------HHHHHHHHHHHHhhc
Confidence 33 2222357789999999754443221 123455888999999
Q ss_pred ccCceEE
Q 017439 219 VPGGLLL 225 (371)
Q Consensus 219 ~pGG~lv 225 (371)
+|||+++
T Consensus 136 kpgG~li 142 (328)
T 1g6q_1 136 VEGGLIF 142 (328)
T ss_dssp EEEEEEE
T ss_pred CCCeEEE
Confidence 9999997
|
| >3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405} | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00011 Score=64.47 Aligned_cols=112 Identities=13% Similarity=0.156 Sum_probs=63.9
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC----Ccceeeec
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL----SKKYFATG 139 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~----~~~~f~~g 139 (371)
..+|+|+|||+|..++.+. + ++. | .-+++..|+-..-....=+.+.. .+--|..+
T Consensus 23 ~~~vLDlGcG~G~~~~~l~--------~-~~~---------~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~ 81 (197)
T 3eey_A 23 GDTVVDATCGNGNDTAFLA--------S-LVG---------E---NGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKD 81 (197)
T ss_dssp TCEEEESCCTTSHHHHHHH--------H-HHC---------T---TCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECS
T ss_pred CCEEEEcCCCCCHHHHHHH--------H-HhC---------C---CCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEEC
Confidence 4699999999999888777 2 221 1 12566777654433222222111 11223333
Q ss_pred cCCCccccc--CCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 140 VPGSFHGRL--FPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 140 vpgSFy~rL--fP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
. + ..+ ++++++|+++++..+ .|.. + +.+. .. .+|...+|+.-.+-
T Consensus 82 d---~-~~~~~~~~~~fD~v~~~~~~-----~~~~--~--------~~~~---~~-----------~~~~~~~l~~~~~~ 128 (197)
T 3eey_A 82 G---H-QNMDKYIDCPVKAVMFNLGY-----LPSG--D--------HSIS---TR-----------PETTIQALSKAMEL 128 (197)
T ss_dssp C---G-GGGGGTCCSCEEEEEEEESB-----CTTS--C--------TTCB---CC-----------HHHHHHHHHHHHHH
T ss_pred C---H-HHHhhhccCCceEEEEcCCc-----ccCc--c--------cccc---cC-----------cccHHHHHHHHHHh
Confidence 3 2 222 466899999998666 2211 0 0000 00 12444578888889
Q ss_pred cccCceEEEEec
Q 017439 218 LVPGGLLLLLTP 229 (371)
Q Consensus 218 L~pGG~lvl~~~ 229 (371)
|+|||++++...
T Consensus 129 Lk~gG~l~~~~~ 140 (197)
T 3eey_A 129 LVTGGIITVVIY 140 (197)
T ss_dssp EEEEEEEEEEEC
T ss_pred CcCCCEEEEEEc
Confidence 999999998874
|
| >3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A* | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00045 Score=62.93 Aligned_cols=153 Identities=13% Similarity=0.074 Sum_probs=80.9
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhh---hc-C---CCCcce
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLF---KS-V---PLSKKY 135 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF---~~-l---~~~~~~ 135 (371)
..-+|+|+|||+|..++.+. + + .| ..+|+--|+-....-... +. . ...+-.
T Consensus 24 ~~~~vLDiGCG~G~~~~~la--------~-~----------~~---~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~ 81 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLA--------I-N----------DQ---NTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVV 81 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHH--------H-T----------CT---TEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEE
T ss_pred CCCEEEEEeccCcHHHHHHH--------H-h----------CC---CCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeE
Confidence 35799999999999888766 2 1 22 457888888744431111 11 1 111223
Q ss_pred eeeccCCCcccccCCC---CceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHH
Q 017439 136 FATGVPGSFHGRLFPE---SSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLN 212 (371)
Q Consensus 136 f~~gvpgSFy~rLfP~---~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~ 212 (371)
|..+... .+ |. +.+|.++++.. | |.. ...-..|...+|+
T Consensus 82 ~~~~d~~----~l-~~~~~d~v~~i~~~~~--~----~~~---------------------------~~~~~~~~~~~l~ 123 (225)
T 3p2e_A 82 FVIAAAE----SL-PFELKNIADSISILFP--W----GTL---------------------------LEYVIKPNRDILS 123 (225)
T ss_dssp EECCBTT----BC-CGGGTTCEEEEEEESC--C----HHH---------------------------HHHHHTTCHHHHH
T ss_pred EEEcCHH----Hh-hhhccCeEEEEEEeCC--C----cHH---------------------------hhhhhcchHHHHH
Confidence 4444422 22 32 55666665543 3 110 0011123345788
Q ss_pred HHHhhcccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCce
Q 017439 213 ARAQELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNF 292 (371)
Q Consensus 213 ~Ra~EL~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F 292 (371)
.-++-|||||++++.+........ +...+. +.- ...|.|++ .+|+++.+++.| |
T Consensus 124 ~~~r~LkpGG~l~i~~~~~~~~~~------------~~~~~~-----~~~-------~~~~~~~~-~~el~~~l~~aG-f 177 (225)
T 3p2e_A 124 NVADLAKKEAHFEFVTTYSDSYEE------------AEIKKR-----GLP-------LLSKAYFL-SEQYKAELSNSG-F 177 (225)
T ss_dssp HHHTTEEEEEEEEEEECCCC--------------------------------------CCHHHHH-SHHHHHHHHHHT-C
T ss_pred HHHHhcCCCcEEEEEEeccccchh------------chhhhc-----CCC-------CCChhhcc-hHHHHHHHHHcC-C
Confidence 888999999999995532221100 000000 100 01123333 246999999877 9
Q ss_pred EEEEEEEee
Q 017439 293 SIEIMNTFT 301 (371)
Q Consensus 293 ~I~~~e~~~ 301 (371)
+|...+.+.
T Consensus 178 ~v~~~~~~~ 186 (225)
T 3p2e_A 178 RIDDVKELD 186 (225)
T ss_dssp EEEEEEEEC
T ss_pred CeeeeeecC
Confidence 999999885
|
| >2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00025 Score=61.83 Aligned_cols=117 Identities=17% Similarity=0.129 Sum_probs=66.3
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccC-CCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCC
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDC-ECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPG 142 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~-~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpg 142 (371)
..+|+|+|||+|..|+.+. + ++...+ +.. .| .-+|+..|+...- .++ +--+. ..+
T Consensus 23 ~~~vLDlGcG~G~~~~~la--------~-~~~~~~~~~~--~~---~~~v~~vD~s~~~------~~~--~~~~~--~~~ 78 (196)
T 2nyu_A 23 GLRVLDCGAAPGAWSQVAV--------Q-KVNAAGTDPS--SP---VGFVLGVDLLHIF------PLE--GATFL--CPA 78 (196)
T ss_dssp TCEEEEETCCSCHHHHHHH--------H-HTTTTCCCTT--SC---CCEEEEECSSCCC------CCT--TCEEE--CSC
T ss_pred CCEEEEeCCCCCHHHHHHH--------H-Hhcccccccc--CC---CceEEEEechhcc------cCC--CCeEE--Eec
Confidence 4799999999999998777 3 221100 000 22 2468888876521 011 11222 012
Q ss_pred Cccc--------ccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHH
Q 017439 143 SFHG--------RLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNAR 214 (371)
Q Consensus 143 SFy~--------rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~R 214 (371)
.+.. ..+|.+++|+++|..++||.-.. ..+ + ....+....+|+.-
T Consensus 79 d~~~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~---~~~-----------------~-------~~~~~~~~~~l~~~ 131 (196)
T 2nyu_A 79 DVTDPRTSQRILEVLPGRRADVILSDMAPNATGFR---DLD-----------------H-------DRLISLCLTLLSVT 131 (196)
T ss_dssp CTTSHHHHHHHHHHSGGGCEEEEEECCCCCCCSCH---HHH-----------------H-------HHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHhcCCCCCcEEEeCCCCCCCCCc---ccC-----------------H-------HHHHHHHHHHHHHH
Confidence 2222 12567899999998877763210 001 0 00112334677777
Q ss_pred HhhcccCceEEEEecCc
Q 017439 215 AQELVPGGLLLLLTPTI 231 (371)
Q Consensus 215 a~EL~pGG~lvl~~~gr 231 (371)
.+-|+|||+|++.....
T Consensus 132 ~~~LkpgG~lv~~~~~~ 148 (196)
T 2nyu_A 132 PDILQPGGTFLCKTWAG 148 (196)
T ss_dssp HHHEEEEEEEEEEECCS
T ss_pred HHHhcCCCEEEEEecCC
Confidence 88999999999987543
|
| >3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A* | Back alignment and structure |
|---|
Probab=97.55 E-value=0.0004 Score=69.69 Aligned_cols=20 Identities=20% Similarity=0.243 Sum_probs=17.4
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~ 82 (371)
..-+|+|+|||+|..++.+.
T Consensus 173 ~gd~VLDLGCGtG~l~l~lA 192 (438)
T 3uwp_A 173 DDDLFVDLGSGVGQVVLQVA 192 (438)
T ss_dssp TTCEEEEESCTTSHHHHHHH
T ss_pred CCCEEEEeCCCCCHHHHHHH
Confidence 45789999999999998876
|
| >3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A* | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00036 Score=69.70 Aligned_cols=132 Identities=13% Similarity=0.128 Sum_probs=77.5
Q ss_pred CCceEEeeecCC------CCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcce
Q 017439 62 SSTFKIADLGCS------TGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKY 135 (371)
Q Consensus 62 ~~~~~IaDlGCs------~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~ 135 (371)
.++.+|+|+||| +|..|+.++ + ++ .| .-+|+.-|+-.+. .+ ...+--
T Consensus 215 ~~~~rVLDIGCG~~~~~~TGG~Sl~la--------~-~~---------fP---~a~V~GVDiSp~m---~~---~~~rI~ 267 (419)
T 3sso_A 215 NQQVRVLEIGVGGYKHPEWGGGSLRMW--------K-SF---------FP---RGQIYGLDIMDKS---HV---DELRIR 267 (419)
T ss_dssp TSCCEEEEECCSCTTCSSCCCHHHHHH--------H-HH---------CT---TCEEEEEESSCCG---GG---CBTTEE
T ss_pred CCCCEEEEEecCCCcCCCCCHHHHHHH--------H-Hh---------CC---CCEEEEEECCHHH---hh---cCCCcE
Confidence 356899999999 788888776 3 32 12 3368888886664 11 112234
Q ss_pred eeeccCCC--cccccC-CCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHH
Q 017439 136 FATGVPGS--FHGRLF-PESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLN 212 (371)
Q Consensus 136 f~~gvpgS--Fy~rLf-P~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~ 212 (371)
|..|.-.+ |-.++. +++++|+|+|..+ ||. .|+..+|+
T Consensus 268 fv~GDa~dlpf~~~l~~~d~sFDlVisdgs-H~~--------------------------------------~d~~~aL~ 308 (419)
T 3sso_A 268 TIQGDQNDAEFLDRIARRYGPFDIVIDDGS-HIN--------------------------------------AHVRTSFA 308 (419)
T ss_dssp EEECCTTCHHHHHHHHHHHCCEEEEEECSC-CCH--------------------------------------HHHHHHHH
T ss_pred EEEecccccchhhhhhcccCCccEEEECCc-ccc--------------------------------------hhHHHHHH
Confidence 55555322 111111 1689999999865 551 13344677
Q ss_pred HHHhhcccCceEEEEecCcCCC---C-CCC-CCCCcchHHHHHHHHHHHHHc
Q 017439 213 ARAQELVPGGLLLLLTPTIRDG---I-PMF-STPEGTNFDYLGSCLYDLANM 259 (371)
Q Consensus 213 ~Ra~EL~pGG~lvl~~~gr~~~---~-~~~-~~~~~~~~~~l~~al~~mv~e 259 (371)
.-.+-|||||++++.-+-..-. . ... ......+.+.++..+..+-.+
T Consensus 309 el~rvLKPGGvlVi~Dl~tsy~p~f~G~~~~~~~~~tii~~lk~l~D~l~~~ 360 (419)
T 3sso_A 309 ALFPHVRPGGLYVIEDMWTAYWPGFGGQADPQECSGTSLGLLKSLIDAIQHQ 360 (419)
T ss_dssp HHGGGEEEEEEEEEECGGGGGCTBTTCCSSTTCCTTSHHHHHHHHHHHHTGG
T ss_pred HHHHhcCCCeEEEEEecccccCcccCCCccCCcchhHHHHHHHHHHHHhccc
Confidence 7789999999999975442111 0 000 012233667777777665443
|
| >4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00018 Score=70.89 Aligned_cols=106 Identities=17% Similarity=0.174 Sum_probs=61.8
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC---C--cce-ee
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL---S--KKY-FA 137 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~---~--~~~-f~ 137 (371)
..+|+|+|||+|..++.+. + + .| ..+|+..|.-..--...=+.+.. . .++ |.
T Consensus 223 ~~~VLDlGcG~G~~s~~la--------~-~----------~p---~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~ 280 (375)
T 4dcm_A 223 EGEIVDLGCGNGVIGLTLL--------D-K----------NP---QAKVVFVDESPMAVASSRLNVETNMPEALDRCEFM 280 (375)
T ss_dssp CSEEEEETCTTCHHHHHHH--------H-H----------CT---TCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEE
T ss_pred CCeEEEEeCcchHHHHHHH--------H-H----------CC---CCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEE
Confidence 3799999999999998877 2 1 12 23577777643221111111110 0 012 33
Q ss_pred eccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 138 TGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 138 ~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
.+. +.. -+|++++|+|+|+-.+|+...++.. ....||+.-.+-
T Consensus 281 ~~D---~~~-~~~~~~fD~Ii~nppfh~~~~~~~~---------------------------------~~~~~l~~~~~~ 323 (375)
T 4dcm_A 281 INN---ALS-GVEPFRFNAVLCNPPFHQQHALTDN---------------------------------VAWEMFHHARRC 323 (375)
T ss_dssp ECS---TTT-TCCTTCEEEEEECCCC-------CC---------------------------------HHHHHHHHHHHH
T ss_pred ech---hhc-cCCCCCeeEEEECCCcccCcccCHH---------------------------------HHHHHHHHHHHh
Confidence 332 333 4578899999999999985444321 112477777888
Q ss_pred cccCceEEEEe
Q 017439 218 LVPGGLLLLLT 228 (371)
Q Consensus 218 L~pGG~lvl~~ 228 (371)
|+|||+++++.
T Consensus 324 LkpgG~l~iv~ 334 (375)
T 4dcm_A 324 LKINGELYIVA 334 (375)
T ss_dssp EEEEEEEEEEE
T ss_pred CCCCcEEEEEE
Confidence 99999999975
|
| >1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20 | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00039 Score=63.32 Aligned_cols=20 Identities=20% Similarity=0.283 Sum_probs=17.7
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~ 82 (371)
...+|+|+|||+|..++.+.
T Consensus 70 ~~~~vLDiG~G~G~~~~~la 89 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIK 89 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHH
T ss_pred CCCEEEEecCCCCHHHHHHH
Confidence 45799999999999998877
|
| >4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00031 Score=69.52 Aligned_cols=20 Identities=50% Similarity=0.657 Sum_probs=17.4
Q ss_pred hHHHHHHHHHhhcccCceEE
Q 017439 206 DIESFLNARAQELVPGGLLL 225 (371)
Q Consensus 206 D~~~FL~~Ra~EL~pGG~lv 225 (371)
.+..+|.+|.+-|+|||+|+
T Consensus 167 ~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 167 MLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp SHHHHHHHHHHHEEEEEEEE
T ss_pred hhhhHHHHHHhhCCCCceEC
Confidence 45668999999999999987
|
| >3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00023 Score=64.16 Aligned_cols=19 Identities=21% Similarity=0.502 Sum_probs=16.5
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~ 82 (371)
..+|+|+|||+|..+..+.
T Consensus 49 ~~~vLDiGcG~G~~~~~l~ 67 (226)
T 3m33_A 49 QTRVLEAGCGHGPDAARFG 67 (226)
T ss_dssp TCEEEEESCTTSHHHHHHG
T ss_pred CCeEEEeCCCCCHHHHHHH
Confidence 4699999999999887766
|
| >3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00018 Score=66.10 Aligned_cols=115 Identities=15% Similarity=0.100 Sum_probs=62.8
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhh---hhhcC-----CC-C
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNT---LFKSV-----PL-S 132 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~---lF~~l-----~~-~ 132 (371)
.+..+|+|+|||+|..++.+. + + .| ...|+.-|.-..--.. ..+.+ .. .
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la--------~-~----------~p---~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~ 102 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELS--------P-L----------FP---DTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQ 102 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHG--------G-G----------ST---TSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCT
T ss_pred CCCCeEEEEccCCcHHHHHHH--------H-H----------CC---CCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCC
Confidence 346789999999999988766 2 1 12 3355666654322110 00100 01 1
Q ss_pred cceeeeccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHH
Q 017439 133 KKYFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLN 212 (371)
Q Consensus 133 ~~~f~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~ 212 (371)
+--|+.+.-..+....||++++|.+++++.-.|..+.- .|.++ ....||+
T Consensus 103 nv~~~~~d~~~~l~~~~~~~~~D~v~~~~~dp~~k~~h-----------~krr~-------------------~~~~~l~ 152 (235)
T 3ckk_A 103 NIACLRSNAMKHLPNFFYKGQLTKMFFLFPDPHFKRTK-----------HKWRI-------------------ISPTLLA 152 (235)
T ss_dssp TEEEEECCTTTCHHHHCCTTCEEEEEEESCC----------------------C-------------------CCHHHHH
T ss_pred eEEEEECcHHHhhhhhCCCcCeeEEEEeCCCchhhhhh-----------hhhhh-------------------hhHHHHH
Confidence 11244444333334457899999999988777733210 00000 0124677
Q ss_pred HHHhhcccCceEEEEe
Q 017439 213 ARAQELVPGGLLLLLT 228 (371)
Q Consensus 213 ~Ra~EL~pGG~lvl~~ 228 (371)
.-++-|+|||++++.+
T Consensus 153 ~~~~~LkpGG~l~~~t 168 (235)
T 3ckk_A 153 EYAYVLRVGGLVYTIT 168 (235)
T ss_dssp HHHHHEEEEEEEEEEE
T ss_pred HHHHHCCCCCEEEEEe
Confidence 7788999999999886
|
| >2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.44 E-value=3.8e-05 Score=74.44 Aligned_cols=105 Identities=11% Similarity=0.145 Sum_probs=65.4
Q ss_pred eEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC--CCcceeeeccCC
Q 017439 65 FKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP--LSKKYFATGVPG 142 (371)
Q Consensus 65 ~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~--~~~~~f~~gvpg 142 (371)
-+|+|+|||+|..++.+. + + .| ..+|+..|....--...=+.+. .....+..+
T Consensus 198 ~~VLDlGcG~G~~~~~la--------~-~----------~~---~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~--- 252 (343)
T 2pjd_A 198 GKVLDVGCGAGVLSVAFA--------R-H----------SP---KIRLTLCDVSAPAVEASRATLAANGVEGEVFAS--- 252 (343)
T ss_dssp SBCCBTTCTTSHHHHHHH--------H-H----------CT---TCBCEEEESBHHHHHHHHHHHHHTTCCCEEEEC---
T ss_pred CeEEEecCccCHHHHHHH--------H-H----------CC---CCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEc---
Confidence 489999999999998776 2 1 12 2356666664432111111111 011122222
Q ss_pred CcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCc
Q 017439 143 SFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGG 222 (371)
Q Consensus 143 SFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 222 (371)
.+.. ++++++|+++|+..+||.... ...+...||+.-.+-|+|||
T Consensus 253 d~~~--~~~~~fD~Iv~~~~~~~g~~~---------------------------------~~~~~~~~l~~~~~~LkpgG 297 (343)
T 2pjd_A 253 NVFS--EVKGRFDMIISNPPFHDGMQT---------------------------------SLDAAQTLIRGAVRHLNSGG 297 (343)
T ss_dssp STTT--TCCSCEEEEEECCCCCSSSHH---------------------------------HHHHHHHHHHHHGGGEEEEE
T ss_pred cccc--cccCCeeEEEECCCcccCccC---------------------------------CHHHHHHHHHHHHHhCCCCc
Confidence 3333 247899999999999983211 12456678999999999999
Q ss_pred eEEEEec
Q 017439 223 LLLLLTP 229 (371)
Q Consensus 223 ~lvl~~~ 229 (371)
+++++..
T Consensus 298 ~l~i~~~ 304 (343)
T 2pjd_A 298 ELRIVAN 304 (343)
T ss_dssp EEEEEEE
T ss_pred EEEEEEc
Confidence 9999763
|
| >1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3 | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00058 Score=61.47 Aligned_cols=20 Identities=15% Similarity=0.207 Sum_probs=17.0
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~ 82 (371)
...+|+|+|||+|..|..+.
T Consensus 57 ~g~~VLDlGcGtG~~~~~la 76 (210)
T 1nt2_A 57 GDERVLYLGAASGTTVSHLA 76 (210)
T ss_dssp SSCEEEEETCTTSHHHHHHH
T ss_pred CCCEEEEECCcCCHHHHHHH
Confidence 34699999999999888766
|
| >3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0 | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00022 Score=62.95 Aligned_cols=102 Identities=12% Similarity=0.105 Sum_probs=59.0
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CCCcceeeec
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PLSKKYFATG 139 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~~~~~f~~g 139 (371)
...+|+|+|||+|..++.+.. . .| ..+++..|.-..--...=+.+ ...+--+..+
T Consensus 40 ~~~~vLDiG~G~G~~~~~la~---------~----------~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~ 97 (204)
T 3e05_A 40 DDLVMWDIGAGSASVSIEASN---------L----------MP---NGRIFALERNPQYLGFIRDNLKKFVARNVTLVEA 97 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHH---------H----------CT---TSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEEC
T ss_pred CCCEEEEECCCCCHHHHHHHH---------H----------CC---CCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeC
Confidence 457999999999999887772 1 11 225666665443222111111 1111112222
Q ss_pred cCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcc
Q 017439 140 VPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELV 219 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 219 (371)
.+.+.+.+..++|++++..+++ |...+|+.-.+-|+
T Consensus 98 ---d~~~~~~~~~~~D~i~~~~~~~-----------------------------------------~~~~~l~~~~~~Lk 133 (204)
T 3e05_A 98 ---FAPEGLDDLPDPDRVFIGGSGG-----------------------------------------MLEEIIDAVDRRLK 133 (204)
T ss_dssp ---CTTTTCTTSCCCSEEEESCCTT-----------------------------------------CHHHHHHHHHHHCC
T ss_pred ---ChhhhhhcCCCCCEEEECCCCc-----------------------------------------CHHHHHHHHHHhcC
Confidence 2233333346789998877654 12236777778899
Q ss_pred cCceEEEEecC
Q 017439 220 PGGLLLLLTPT 230 (371)
Q Consensus 220 pGG~lvl~~~g 230 (371)
|||++++....
T Consensus 134 pgG~l~~~~~~ 144 (204)
T 3e05_A 134 SEGVIVLNAVT 144 (204)
T ss_dssp TTCEEEEEECB
T ss_pred CCeEEEEEecc
Confidence 99999997644
|
| >1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A* | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00022 Score=67.45 Aligned_cols=40 Identities=23% Similarity=0.346 Sum_probs=31.5
Q ss_pred CCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEE
Q 017439 151 ESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLL 226 (371)
Q Consensus 151 ~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl 226 (371)
.+++|+|+|.+.|+|+.. + +....|+.-++-|+|||.|++
T Consensus 211 ~~~fDlI~crnvliyf~~-~-----------------------------------~~~~vl~~~~~~L~pgG~L~l 250 (274)
T 1af7_A 211 PGPFDAIFCRNVMIYFDK-T-----------------------------------TQEDILRRFVPLLKPDGLLFA 250 (274)
T ss_dssp CCCEEEEEECSSGGGSCH-H-----------------------------------HHHHHHHHHGGGEEEEEEEEE
T ss_pred CCCeeEEEECCchHhCCH-H-----------------------------------HHHHHHHHHHHHhCCCcEEEE
Confidence 578999999999999642 1 123467777899999999987
|
| >2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A* | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00014 Score=67.46 Aligned_cols=19 Identities=32% Similarity=0.338 Sum_probs=16.0
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~ 82 (371)
..+|+|+|||+|..++.+.
T Consensus 121 ~~~VLDiGcG~G~l~~~la 139 (254)
T 2nxc_A 121 GDKVLDLGTGSGVLAIAAE 139 (254)
T ss_dssp TCEEEEETCTTSHHHHHHH
T ss_pred CCEEEEecCCCcHHHHHHH
Confidence 4689999999999887655
|
| >1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7 | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00021 Score=64.27 Aligned_cols=21 Identities=19% Similarity=0.291 Sum_probs=17.6
Q ss_pred CceEEeeecCCCCcccHHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAMQ 83 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~ 83 (371)
...+|+|+|||+|..+..+..
T Consensus 70 ~~~~vLdiG~G~G~~~~~l~~ 90 (231)
T 1vbf_A 70 KGQKVLEIGTGIGYYTALIAE 90 (231)
T ss_dssp TTCEEEEECCTTSHHHHHHHH
T ss_pred CCCEEEEEcCCCCHHHHHHHH
Confidence 346999999999999988763
|
| >2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00013 Score=64.82 Aligned_cols=80 Identities=11% Similarity=0.052 Sum_probs=44.2
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CCCcceeeec
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PLSKKYFATG 139 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~~~~~f~~g 139 (371)
...+|+|+|||+|..+..+.. .. .| ..+++..|.-.+--...=+.+ ...+--|..+
T Consensus 77 ~~~~vLdiG~G~G~~~~~l~~---------~~---------~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~ 135 (215)
T 2yxe_A 77 PGMKVLEIGTGCGYHAAVTAE---------IV---------GE---DGLVVSIERIPELAEKAERTLRKLGYDNVIVIVG 135 (215)
T ss_dssp TTCEEEEECCTTSHHHHHHHH---------HH---------CT---TSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEES
T ss_pred CCCEEEEECCCccHHHHHHHH---------Hh---------CC---CCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEEC
Confidence 346999999999999987762 11 01 124666665433222111111 1111122222
Q ss_pred cCCCcccccCCCCceeEEEecCCcccc
Q 017439 140 VPGSFHGRLFPESSLHVAHTSNALPWL 166 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~alHWL 166 (371)
.+...+.+.+++|+++++.++|++
T Consensus 136 ---d~~~~~~~~~~fD~v~~~~~~~~~ 159 (215)
T 2yxe_A 136 ---DGTLGYEPLAPYDRIYTTAAGPKI 159 (215)
T ss_dssp ---CGGGCCGGGCCEEEEEESSBBSSC
T ss_pred ---CcccCCCCCCCeeEEEECCchHHH
Confidence 222222236789999999999984
|
| >1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A* | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00042 Score=59.52 Aligned_cols=20 Identities=30% Similarity=0.399 Sum_probs=17.2
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~ 82 (371)
...+|+|+|||+|..++.+.
T Consensus 33 ~~~~vldiG~G~G~~~~~l~ 52 (192)
T 1l3i_A 33 KNDVAVDVGCGTGGVTLELA 52 (192)
T ss_dssp TTCEEEEESCTTSHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHH
Confidence 34699999999999988776
|
| >3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00061 Score=62.85 Aligned_cols=123 Identities=13% Similarity=0.077 Sum_probs=65.4
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CCC-cceeee
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PLS-KKYFAT 138 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~~-~~~f~~ 138 (371)
...+|+|+|||+|..++.+. + + .+ . +|+..|+-..-....=+.+ +-. +-.+..
T Consensus 49 ~~~~vLDlG~G~G~~~~~la--------~-~----------~~---~-~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~ 105 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLS--------T-R----------TK---A-KIVGVEIQERLADMAKRSVAYNQLEDQIEIIE 105 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHH--------T-T----------CC---C-EEEEECCSHHHHHHHHHHHHHTTCTTTEEEEC
T ss_pred CCCEEEEcCCchhHHHHHHH--------H-h----------cC---C-cEEEEECCHHHHHHHHHHHHHCCCcccEEEEE
Confidence 45799999999999888766 2 1 11 2 5677776544332222221 111 122333
Q ss_pred ccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHH-HHHHHhhHHHHHHHHHhh
Q 017439 139 GVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAY-SAQFKNDIESFLNARAQE 217 (371)
Q Consensus 139 gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay-~~Q~~~D~~~FL~~Ra~E 217 (371)
+.-..+- .-+|++++|+|+|+-.++..+.. .+.+ +....+. ......++..||+.-++-
T Consensus 106 ~D~~~~~-~~~~~~~fD~Ii~npPy~~~~~~--~~~~-----------------~~~~~~~a~~~~~~~~~~~l~~~~~~ 165 (259)
T 3lpm_A 106 YDLKKIT-DLIPKERADIVTCNPPYFATPDT--SLKN-----------------TNEHFRIARHEVMCTLEDTIRVAASL 165 (259)
T ss_dssp SCGGGGG-GTSCTTCEEEEEECCCC------------------------------------------HHHHHHHHHHHHH
T ss_pred CcHHHhh-hhhccCCccEEEECCCCCCCccc--cCCC-----------------CchHHHhhhccccCCHHHHHHHHHHH
Confidence 3322221 22568999999998665543110 0000 0000000 111235778899999999
Q ss_pred cccCceEEEEe
Q 017439 218 LVPGGLLLLLT 228 (371)
Q Consensus 218 L~pGG~lvl~~ 228 (371)
|+|||++++..
T Consensus 166 LkpgG~l~~~~ 176 (259)
T 3lpm_A 166 LKQGGKANFVH 176 (259)
T ss_dssp EEEEEEEEEEE
T ss_pred ccCCcEEEEEE
Confidence 99999999965
|
| >1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A* | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00048 Score=62.42 Aligned_cols=19 Identities=21% Similarity=0.368 Sum_probs=16.8
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~ 82 (371)
..+|+|+|||+|..+..+.
T Consensus 92 ~~~vLdiG~G~G~~~~~la 110 (235)
T 1jg1_A 92 GMNILEVGTGSGWNAALIS 110 (235)
T ss_dssp TCCEEEECCTTSHHHHHHH
T ss_pred CCEEEEEeCCcCHHHHHHH
Confidence 4689999999999998776
|
| >2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00061 Score=63.25 Aligned_cols=124 Identities=16% Similarity=0.162 Sum_probs=64.0
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC------C-cce
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL------S-KKY 135 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~------~-~~~ 135 (371)
...+|+|+|||+|..++.+.+. .| ..+|+..|+-..-....=+.+.. . +-.
T Consensus 36 ~~~~VLDlG~G~G~~~l~la~~-------------------~~---~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~ 93 (260)
T 2ozv_A 36 RACRIADLGAGAGAAGMAVAAR-------------------LE---KAEVTLYERSQEMAEFARRSLELPDNAAFSARIE 93 (260)
T ss_dssp SCEEEEECCSSSSHHHHHHHHH-------------------CT---TEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEE
T ss_pred CCCEEEEeCChHhHHHHHHHHh-------------------CC---CCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEE
Confidence 4579999999999998877631 11 23455555533221111111111 0 112
Q ss_pred eeeccCCCccc----ccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHH-HHHhhHHHH
Q 017439 136 FATGVPGSFHG----RLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSA-QFKNDIESF 210 (371)
Q Consensus 136 f~~gvpgSFy~----rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~-Q~~~D~~~F 210 (371)
+..+.-..+.. ..+|++++|+|+|+-..++... ... +...++.+. ....++..|
T Consensus 94 ~~~~D~~~~~~~~~~~~~~~~~fD~Vv~nPPy~~~~~----~~~-----------------~~~~~~~a~~~~~~~~~~~ 152 (260)
T 2ozv_A 94 VLEADVTLRAKARVEAGLPDEHFHHVIMNPPYNDAGD----RRT-----------------PDALKAEAHAMTEGLFEDW 152 (260)
T ss_dssp EEECCTTCCHHHHHHTTCCTTCEEEEEECCCC------------------------------------------CCHHHH
T ss_pred EEeCCHHHHhhhhhhhccCCCCcCEEEECCCCcCCCC----CCC-----------------cCHHHHHHhhcCcCCHHHH
Confidence 33333222211 2367889999999966665321 000 011111111 112457889
Q ss_pred HHHHHhhcccCceEEEEec
Q 017439 211 LNARAQELVPGGLLLLLTP 229 (371)
Q Consensus 211 L~~Ra~EL~pGG~lvl~~~ 229 (371)
|+.-++-|+|||++++...
T Consensus 153 l~~~~~~LkpgG~l~~~~~ 171 (260)
T 2ozv_A 153 IRTASAIMVSGGQLSLISR 171 (260)
T ss_dssp HHHHHHHEEEEEEEEEEEC
T ss_pred HHHHHHHcCCCCEEEEEEc
Confidence 9999999999999999764
|
| >1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00088 Score=61.28 Aligned_cols=23 Identities=13% Similarity=0.245 Sum_probs=18.3
Q ss_pred hhHHHHHHHHHhhcccCceEEEE
Q 017439 205 NDIESFLNARAQELVPGGLLLLL 227 (371)
Q Consensus 205 ~D~~~FL~~Ra~EL~pGG~lvl~ 227 (371)
.+...||+.-++-|+|||+++++
T Consensus 191 ~~~~~~l~~~~~~LkpgG~l~~~ 213 (250)
T 1o9g_A 191 QPVAGLLRSLASALPAHAVIAVT 213 (250)
T ss_dssp HHHHHHHHHHHHHSCTTCEEEEE
T ss_pred cHHHHHHHHHHHhcCCCcEEEEe
Confidence 44556788778889999999984
|
| >3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A* | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00068 Score=61.95 Aligned_cols=24 Identities=25% Similarity=0.355 Sum_probs=18.9
Q ss_pred hhHHHHHHHHHhhcccCceEEEEe
Q 017439 205 NDIESFLNARAQELVPGGLLLLLT 228 (371)
Q Consensus 205 ~D~~~FL~~Ra~EL~pGG~lvl~~ 228 (371)
.|...||+.-++-|||||+|++..
T Consensus 147 ~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 147 HQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp HHHHHHHHTHHHHEEEEEEEEECC
T ss_pred cchhhhhhhhhheeCCCCEEEEEe
Confidence 456668888889999999997643
|
| >3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.33 E-value=8.6e-05 Score=67.13 Aligned_cols=81 Identities=17% Similarity=0.159 Sum_probs=48.3
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhh---hcCCCCcceeeec
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLF---KSVPLSKKYFATG 139 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF---~~l~~~~~~f~~g 139 (371)
.+-+|+|+|||+|+.++.++ . . .| ..++...|.-..-=.-.= ..+....++-+..
T Consensus 49 ~~~~VLDlGCG~GplAl~l~--------~--~---------~p---~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d 106 (200)
T 3fzg_A 49 HVSSILDFGCGFNPLALYQW--------N--E---------NE---KIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLN 106 (200)
T ss_dssp CCSEEEEETCTTHHHHHHHH--------C--S---------SC---CCEEEEECSCHHHHHHHHHHHHHSCCSSEEEEEC
T ss_pred CCCeEEEecCCCCHHHHHHH--------h--c---------CC---CCEEEEEeCCHHHHHHHHHHHHhcCCCccEEEec
Confidence 36799999999999999887 2 1 33 336666665442211110 0011111222211
Q ss_pred cCCCcccccCCCCceeEEEecCCccccCCCC
Q 017439 140 VPGSFHGRLFPESSLHVAHTSNALPWLSKIP 170 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP 170 (371)
+....|+.++|++.++..||-|.+.+
T Consensus 107 -----~~~~~~~~~~DvVLa~k~LHlL~~~~ 132 (200)
T 3fzg_A 107 -----KESDVYKGTYDVVFLLKMLPVLKQQD 132 (200)
T ss_dssp -----CHHHHTTSEEEEEEEETCHHHHHHTT
T ss_pred -----ccccCCCCCcChhhHhhHHHhhhhhH
Confidence 12235889999999999999985444
|
| >2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46 | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00046 Score=61.35 Aligned_cols=18 Identities=22% Similarity=0.113 Sum_probs=16.2
Q ss_pred eEEeeecCCCCcccHHHH
Q 017439 65 FKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 65 ~~IaDlGCs~G~Ns~~~~ 82 (371)
.+|+|+|||+|..++.++
T Consensus 55 ~~vLDlGcGtG~~~~~~~ 72 (201)
T 2ift_A 55 SECLDGFAGSGSLGFEAL 72 (201)
T ss_dssp CEEEETTCTTCHHHHHHH
T ss_pred CeEEEcCCccCHHHHHHH
Confidence 589999999999998766
|
| >4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp} | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00015 Score=63.58 Aligned_cols=128 Identities=13% Similarity=0.055 Sum_probs=59.8
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCC--cceeeec
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLS--KKYFATG 139 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~--~~~f~~g 139 (371)
....+|+|+|||+|..++.+. + + .| ..+++..|+-..--...=+.+... +--|..+
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~--------~-~----------~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~ 86 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIA--------L-A----------CP---GVSVTAVDLSMDALAVARRNAERFGAVVDWAAA 86 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHH--------H-H----------CT---TEEEEEEECC-------------------CCHH
T ss_pred CCCCEEEEecCCHhHHHHHHH--------H-h----------CC---CCeEEEEECCHHHHHHHHHHHHHhCCceEEEEc
Confidence 456899999999999888777 2 1 11 235666665433222111111110 1112222
Q ss_pred cCCCcccccCCC-----CceeEEEecCCccccCCCC---ccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHH
Q 017439 140 VPGSFHGRLFPE-----SSLHVAHTSNALPWLSKIP---KEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFL 211 (371)
Q Consensus 140 vpgSFy~rLfP~-----~Svd~~~Ss~alHWLS~vP---~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL 211 (371)
.+.+ .+++ +++|+++++-.+|+..... ..+... ... ..... .....+.+..||
T Consensus 87 ---d~~~-~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~-----~~~-~~~~~---------~~~~~~~~~~~l 147 (215)
T 4dzr_A 87 ---DGIE-WLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDY-----EPR-LALDG---------GEDGLQFYRRMA 147 (215)
T ss_dssp ---HHHH-HHHHHHHTTCCBSEEEECCCCCC---------------------------------------CTTHHHHHHH
T ss_pred ---chHh-hhhhhhhccCcccEEEECCCCCCCccccccChhhhcc-----Ccc-ccccC---------CCcHHHHHHHHH
Confidence 2233 4454 8999999987776644321 111100 000 00000 001123346788
Q ss_pred HHHHhhcccCceEEEEecC
Q 017439 212 NARAQELVPGGLLLLLTPT 230 (371)
Q Consensus 212 ~~Ra~EL~pGG~lvl~~~g 230 (371)
+.-.+-|+|||++++...+
T Consensus 148 ~~~~~~LkpgG~l~~~~~~ 166 (215)
T 4dzr_A 148 ALPPYVLARGRAGVFLEVG 166 (215)
T ss_dssp TCCGGGBCSSSEEEEEECT
T ss_pred HHHHHHhcCCCeEEEEEEC
Confidence 8888999999995444433
|
| >3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00066 Score=65.66 Aligned_cols=113 Identities=16% Similarity=0.139 Sum_probs=68.4
Q ss_pred CCCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC--C-CCcceee
Q 017439 61 TSSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV--P-LSKKYFA 137 (371)
Q Consensus 61 ~~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l--~-~~~~~f~ 137 (371)
.+++.+|+|+|||+|..+..+.. ++ | ..++..-|+-..--...=+.+ + ..+--+.
T Consensus 87 ~p~~~rVLdIG~G~G~la~~la~---------~~----------p---~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~ 144 (317)
T 3gjy_A 87 DASKLRITHLGGGACTMARYFAD---------VY----------P---QSRNTVVELDAELARLSREWFDIPRAPRVKIR 144 (317)
T ss_dssp CGGGCEEEEESCGGGHHHHHHHH---------HS----------T---TCEEEEEESCHHHHHHHHHHSCCCCTTTEEEE
T ss_pred CCCCCEEEEEECCcCHHHHHHHH---------HC----------C---CcEEEEEECCHHHHHHHHHhccccCCCceEEE
Confidence 34578999999999988887772 11 1 224445554332111111111 1 1223355
Q ss_pred eccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 138 TGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 138 ~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
.+....|-.+ ++++++|+|++....|| ..|..+.. ..|++.-.+-
T Consensus 145 ~~Da~~~l~~-~~~~~fDvIi~D~~~~~--~~~~~L~t--------------------------------~efl~~~~r~ 189 (317)
T 3gjy_A 145 VDDARMVAES-FTPASRDVIIRDVFAGA--ITPQNFTT--------------------------------VEFFEHCHRG 189 (317)
T ss_dssp ESCHHHHHHT-CCTTCEEEEEECCSTTS--CCCGGGSB--------------------------------HHHHHHHHHH
T ss_pred ECcHHHHHhh-ccCCCCCEEEECCCCcc--ccchhhhH--------------------------------HHHHHHHHHh
Confidence 5555554433 36789999999887776 23433321 2378888899
Q ss_pred cccCceEEEEecC
Q 017439 218 LVPGGLLLLLTPT 230 (371)
Q Consensus 218 L~pGG~lvl~~~g 230 (371)
|+|||+|++....
T Consensus 190 LkpgGvlv~~~~~ 202 (317)
T 3gjy_A 190 LAPGGLYVANCGD 202 (317)
T ss_dssp EEEEEEEEEEEEE
T ss_pred cCCCcEEEEEecC
Confidence 9999999998853
|
| >3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A* | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00076 Score=64.29 Aligned_cols=109 Identities=13% Similarity=0.088 Sum_probs=59.6
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC-------CCCcc
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV-------PLSKK 134 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l-------~~~~~ 134 (371)
+++.+|+|+|||+|..+..++ + . .| ..+|...|+-..-....=+.+ ...+-
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~--------~--~---------~~---~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v 151 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVL--------R--H---------GT---VEHCDLVDIDGEVMEQSKQHFPQISRSLADPRA 151 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHH--------T--C---------TT---CCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTE
T ss_pred CCCCeEEEEcCCCCHHHHHHH--------h--C---------CC---CCEEEEEECCHHHHHHHHHHhHHhhcccCCCcE
Confidence 345799999999999988776 2 1 11 225666665432211111111 11122
Q ss_pred eeeeccCCCcccccCCCCceeEEEecCCccccCCCCc-cccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHH
Q 017439 135 YFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPK-EITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNA 213 (371)
Q Consensus 135 ~f~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~-~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~ 213 (371)
-+..+....|-.+ .+++++|+|++....++ .|. .+.. ..||+.
T Consensus 152 ~~~~~D~~~~~~~-~~~~~fDvIi~d~~~~~---~~~~~l~~--------------------------------~~~l~~ 195 (304)
T 3bwc_A 152 TVRVGDGLAFVRQ-TPDNTYDVVIIDTTDPA---GPASKLFG--------------------------------EAFYKD 195 (304)
T ss_dssp EEEESCHHHHHHS-SCTTCEEEEEEECC------------CC--------------------------------HHHHHH
T ss_pred EEEECcHHHHHHh-ccCCceeEEEECCCCcc---ccchhhhH--------------------------------HHHHHH
Confidence 2444432222111 15789999999877665 221 1100 236777
Q ss_pred HHhhcccCceEEEEe
Q 017439 214 RAQELVPGGLLLLLT 228 (371)
Q Consensus 214 Ra~EL~pGG~lvl~~ 228 (371)
-.+-|+|||+|++..
T Consensus 196 ~~~~LkpgG~lv~~~ 210 (304)
T 3bwc_A 196 VLRILKPDGICCNQG 210 (304)
T ss_dssp HHHHEEEEEEEEEEE
T ss_pred HHHhcCCCcEEEEec
Confidence 788999999999985
|
| >2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A* | Back alignment and structure |
|---|
Probab=97.22 E-value=0.0018 Score=60.28 Aligned_cols=123 Identities=15% Similarity=0.196 Sum_probs=68.4
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CCCcceeeec
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PLSKKYFATG 139 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~~~~~f~~g 139 (371)
...+|+|+|||+|..++.+. . . .| ..+++..|.-..--...=+.. ...+-.|..+
T Consensus 109 ~~~~vLDlG~GsG~~~~~la--------~-~----------~~---~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~ 166 (276)
T 2b3t_A 109 QPCRILDLGTGTGAIALALA--------S-E----------RP---DCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQS 166 (276)
T ss_dssp SCCEEEEETCTTSHHHHHHH--------H-H----------CT---TSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECC
T ss_pred CCCEEEEecCCccHHHHHHH--------H-h----------CC---CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEc
Confidence 34699999999999988776 2 1 12 235677776443222111111 1111223333
Q ss_pred cCCCcccccCCCCceeEEEecCCccccCCCCc---cccCC-CCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHH
Q 017439 140 VPGSFHGRLFPESSLHVAHTSNALPWLSKIPK---EITNS-NSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARA 215 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~---~l~d~-~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra 215 (371)
.+.. .+|++++|+++|+...+|... +. .+..+ ...++..| ...-.++..+++.-.
T Consensus 167 ---d~~~-~~~~~~fD~Iv~npPy~~~~~-~~l~~~v~~~~p~~al~~~----------------~~g~~~~~~~l~~~~ 225 (276)
T 2b3t_A 167 ---DWFS-ALAGQQFAMIVSNPPYIDEQD-PHLQQGDVRFEPLTALVAA----------------DSGMADIVHIIEQSR 225 (276)
T ss_dssp ---STTG-GGTTCCEEEEEECCCCBCTTC-HHHHSSGGGSSCSTTTBCH----------------HHHTHHHHHHHHHHG
T ss_pred ---chhh-hcccCCccEEEECCCCCCccc-cccChhhhhcCcHHHHcCC----------------CcHHHHHHHHHHHHH
Confidence 2333 345788999999988887654 11 11100 00011000 111245667888889
Q ss_pred hhcccCceEEEEe
Q 017439 216 QELVPGGLLLLLT 228 (371)
Q Consensus 216 ~EL~pGG~lvl~~ 228 (371)
+-|+|||++++..
T Consensus 226 ~~LkpgG~l~~~~ 238 (276)
T 2b3t_A 226 NALVSGGFLLLEH 238 (276)
T ss_dssp GGEEEEEEEEEEC
T ss_pred HhcCCCCEEEEEE
Confidence 9999999999974
|
| >2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46 | Back alignment and structure |
|---|
Probab=97.20 E-value=0.001 Score=59.06 Aligned_cols=18 Identities=17% Similarity=0.087 Sum_probs=16.2
Q ss_pred eEEeeecCCCCcccHHHH
Q 017439 65 FKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 65 ~~IaDlGCs~G~Ns~~~~ 82 (371)
.+|+|+|||+|..++.++
T Consensus 56 ~~vLDlgcG~G~~~~~l~ 73 (202)
T 2fpo_A 56 AQCLDCFAGSGALGLEAL 73 (202)
T ss_dssp CEEEETTCTTCHHHHHHH
T ss_pred CeEEEeCCCcCHHHHHHH
Confidence 689999999999998766
|
| >3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A* | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00011 Score=66.73 Aligned_cols=79 Identities=16% Similarity=0.014 Sum_probs=46.8
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CC-Ccceeeec
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PL-SKKYFATG 139 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~-~~~~f~~g 139 (371)
..+|+|+|||+|..++.+... -.+|+..|+-..-....=+.+ .- .+--|..+
T Consensus 79 ~~~vLD~gcG~G~~~~~la~~------------------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~ 134 (241)
T 3gdh_A 79 CDVVVDAFCGVGGNTIQFALT------------------------GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICG 134 (241)
T ss_dssp CSEEEETTCTTSHHHHHHHHT------------------------TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEES
T ss_pred CCEEEECccccCHHHHHHHHc------------------------CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEEC
Confidence 469999999999999988731 013555555433222221111 11 11223444
Q ss_pred cCCCcccccCCCCceeEEEecCCccccCCCC
Q 017439 140 VPGSFHGRLFPESSLHVAHTSNALPWLSKIP 170 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP 170 (371)
. ...+.|++++|+++++..+||.....
T Consensus 135 d----~~~~~~~~~~D~v~~~~~~~~~~~~~ 161 (241)
T 3gdh_A 135 D----FLLLASFLKADVVFLSPPWGGPDYAT 161 (241)
T ss_dssp C----HHHHGGGCCCSEEEECCCCSSGGGGG
T ss_pred C----hHHhcccCCCCEEEECCCcCCcchhh
Confidence 3 22333678999999999999976544
|
| >2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A* | Back alignment and structure |
|---|
Probab=97.15 E-value=0.003 Score=59.21 Aligned_cols=99 Identities=8% Similarity=0.033 Sum_probs=60.0
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC---CCcce-eeec
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP---LSKKY-FATG 139 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~---~~~~~-f~~g 139 (371)
.-+|+|+|||+|..|+.+. . + -+ . +|+..|+-..--...=+.+. -...+ |..|
T Consensus 126 ~~~VLDlgcG~G~~~~~la--------~-~----------~~---~-~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~ 182 (278)
T 2frn_A 126 DELVVDMFAGIGHLSLPIA--------V-Y----------GK---A-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNM 182 (278)
T ss_dssp TCEEEETTCTTTTTHHHHH--------H-H----------TC---C-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECS
T ss_pred CCEEEEecccCCHHHHHHH--------H-h----------CC---C-EEEEEECCHHHHHHHHHHHHHcCCCceEEEEEC
Confidence 4689999999999999877 2 1 11 3 57777775543322222111 11122 5555
Q ss_pred cCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcc
Q 017439 140 VPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELV 219 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 219 (371)
. ...+.+++++|++++. .|... ..||..-.+-|+
T Consensus 183 D----~~~~~~~~~fD~Vi~~--------~p~~~----------------------------------~~~l~~~~~~Lk 216 (278)
T 2frn_A 183 D----NRDFPGENIADRILMG--------YVVRT----------------------------------HEFIPKALSIAK 216 (278)
T ss_dssp C----TTTCCCCSCEEEEEEC--------CCSSG----------------------------------GGGHHHHHHHEE
T ss_pred C----HHHhcccCCccEEEEC--------CchhH----------------------------------HHHHHHHHHHCC
Confidence 5 2333447899999884 22111 125666667899
Q ss_pred cCceEEEEecCc
Q 017439 220 PGGLLLLLTPTI 231 (371)
Q Consensus 220 pGG~lvl~~~gr 231 (371)
|||++++.....
T Consensus 217 pgG~l~~~~~~~ 228 (278)
T 2frn_A 217 DGAIIHYHNTVP 228 (278)
T ss_dssp EEEEEEEEEEEE
T ss_pred CCeEEEEEEeec
Confidence 999999988654
|
| >1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20 | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0016 Score=57.29 Aligned_cols=98 Identities=11% Similarity=0.060 Sum_probs=58.6
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhc---CCCCcceeeecc
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKS---VPLSKKYFATGV 140 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~---l~~~~~~f~~gv 140 (371)
..+|+|+|||+|..++.+. . . .| ..+++..|.-..-....=+. ....+-.|..+.
T Consensus 66 ~~~vLDiG~G~G~~~~~l~--------~-~----------~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d 123 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLS--------I-V----------RP---EAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSR 123 (207)
T ss_dssp SSEEEEETCTTTTTHHHHH--------H-H----------CT---TSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECC
T ss_pred CCeEEEECCCCCHHHHHHH--------H-H----------CC---CCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecc
Confidence 4599999999999998877 2 1 12 23567777644332222111 111111233332
Q ss_pred CCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc
Q 017439 141 PGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP 220 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 220 (371)
+. .+.|++++|+++|... .++..+|+.-.+-|+|
T Consensus 124 ---~~-~~~~~~~~D~i~~~~~------------------------------------------~~~~~~l~~~~~~L~~ 157 (207)
T 1jsx_A 124 ---VE-EFPSEPPFDGVISRAF------------------------------------------ASLNDMVSWCHHLPGE 157 (207)
T ss_dssp ---TT-TSCCCSCEEEEECSCS------------------------------------------SSHHHHHHHHTTSEEE
T ss_pred ---hh-hCCccCCcCEEEEecc------------------------------------------CCHHHHHHHHHHhcCC
Confidence 22 2346788999997421 1234578888899999
Q ss_pred CceEEEEec
Q 017439 221 GGLLLLLTP 229 (371)
Q Consensus 221 GG~lvl~~~ 229 (371)
||++++...
T Consensus 158 gG~l~~~~~ 166 (207)
T 1jsx_A 158 QGRFYALKG 166 (207)
T ss_dssp EEEEEEEES
T ss_pred CcEEEEEeC
Confidence 999999853
|
| >2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.14 E-value=0.00082 Score=60.70 Aligned_cols=105 Identities=16% Similarity=0.093 Sum_probs=60.2
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcC---chhhhhhcCCCCcceeeec
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNN---DFNTLFKSVPLSKKYFATG 139 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~N---DFn~lF~~l~~~~~~f~~g 139 (371)
..-+|+|+|||+|..+..+. + ++. | .-+|+.-|+... +.....+.. .+-.|..+
T Consensus 77 ~~~~vLDlG~G~G~~~~~la--------~-~~g---------~---~~~v~gvD~s~~~i~~~~~~a~~~--~~v~~~~~ 133 (233)
T 2ipx_A 77 PGAKVLYLGAASGTTVSHVS--------D-IVG---------P---DGLVYAVEFSHRSGRDLINLAKKR--TNIIPVIE 133 (233)
T ss_dssp TTCEEEEECCTTSHHHHHHH--------H-HHC---------T---TCEEEEECCCHHHHHHHHHHHHHC--TTEEEECS
T ss_pred CCCEEEEEcccCCHHHHHHH--------H-HhC---------C---CcEEEEEECCHHHHHHHHHHhhcc--CCeEEEEc
Confidence 34699999999999998877 2 221 1 225667776542 222222222 12224444
Q ss_pred cCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcc
Q 017439 140 VPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELV 219 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 219 (371)
.-.....--++++++|++++..+ .|. +...++..-.+-|+
T Consensus 134 d~~~~~~~~~~~~~~D~V~~~~~------~~~----------------------------------~~~~~~~~~~~~Lk 173 (233)
T 2ipx_A 134 DARHPHKYRMLIAMVDVIFADVA------QPD----------------------------------QTRIVALNAHTFLR 173 (233)
T ss_dssp CTTCGGGGGGGCCCEEEEEECCC------CTT----------------------------------HHHHHHHHHHHHEE
T ss_pred ccCChhhhcccCCcEEEEEEcCC------Ccc----------------------------------HHHHHHHHHHHHcC
Confidence 32221101135689999999543 111 11235666678999
Q ss_pred cCceEEEEecC
Q 017439 220 PGGLLLLLTPT 230 (371)
Q Consensus 220 pGG~lvl~~~g 230 (371)
|||++++.+..
T Consensus 174 pgG~l~i~~~~ 184 (233)
T 2ipx_A 174 NGGHFVISIKA 184 (233)
T ss_dssp EEEEEEEEEEH
T ss_pred CCeEEEEEEcc
Confidence 99999997654
|
| >1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1 | Back alignment and structure |
|---|
Probab=97.12 E-value=0.0012 Score=63.05 Aligned_cols=79 Identities=13% Similarity=0.050 Sum_probs=44.0
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhc---CCCCcceeeecc
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKS---VPLSKKYFATGV 140 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~---l~~~~~~f~~gv 140 (371)
..+|+|+|||+|..++.+... .. . ..+|+..|+-.+--...=+. ....+--|..+.
T Consensus 76 ~~~VLDiGcG~G~~~~~la~~---------~~--------~----~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d 134 (317)
T 1dl5_A 76 GMRVLEIGGGTGYNAAVMSRV---------VG--------E----KGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGD 134 (317)
T ss_dssp TCEEEEECCTTSHHHHHHHHH---------HC--------T----TCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESC
T ss_pred cCEEEEecCCchHHHHHHHHh---------cC--------C----CCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECC
Confidence 469999999999988877621 11 0 12455666543322111111 111112233333
Q ss_pred CCCcccccCCCCceeEEEecCCcccc
Q 017439 141 PGSFHGRLFPESSLHVAHTSNALPWL 166 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~alHWL 166 (371)
+..-+.+.+++|++++...+|++
T Consensus 135 ---~~~~~~~~~~fD~Iv~~~~~~~~ 157 (317)
T 1dl5_A 135 ---GYYGVPEFSPYDVIFVTVGVDEV 157 (317)
T ss_dssp ---GGGCCGGGCCEEEEEECSBBSCC
T ss_pred ---hhhccccCCCeEEEEEcCCHHHH
Confidence 22223456889999999999984
|
| >1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A* | Back alignment and structure |
|---|
Probab=97.07 E-value=0.00053 Score=65.77 Aligned_cols=111 Identities=12% Similarity=0.091 Sum_probs=65.1
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhh---hhc-----CCCCcc
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTL---FKS-----VPLSKK 134 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~l---F~~-----l~~~~~ 134 (371)
.+.+|+|+|||+|..+..+. + . .| .-++...|+-..--... |.. +...+-
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~--------~--~---------~~---~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v 134 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVL--------K--H---------PT---VEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRA 134 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHT--------T--S---------TT---CCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTE
T ss_pred CCCeEEEEcCCcCHHHHHHH--------h--c---------CC---CCEEEEEECCHHHHHHHHHHhHhhccccccCCce
Confidence 45799999999999988776 2 1 11 22566666543321111 111 111222
Q ss_pred eeeeccCCCcccccCCCCceeEEEecCCccc-cCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHH
Q 017439 135 YFATGVPGSFHGRLFPESSLHVAHTSNALPW-LSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNA 213 (371)
Q Consensus 135 ~f~~gvpgSFy~rLfP~~Svd~~~Ss~alHW-LS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~ 213 (371)
-+..+....|-.+ +++++|+|++....|| ++..+..+. ...|++.
T Consensus 135 ~~~~~D~~~~l~~--~~~~fD~Ii~d~~~~~~~~~~~~~l~--------------------------------~~~~l~~ 180 (314)
T 1uir_A 135 VLVIDDARAYLER--TEERYDVVIIDLTDPVGEDNPARLLY--------------------------------TVEFYRL 180 (314)
T ss_dssp EEEESCHHHHHHH--CCCCEEEEEEECCCCBSTTCGGGGGS--------------------------------SHHHHHH
T ss_pred EEEEchHHHHHHh--cCCCccEEEECCCCcccccCcchhcc--------------------------------HHHHHHH
Confidence 3444543333222 4788999999988887 222121111 1347777
Q ss_pred HHhhcccCceEEEEec
Q 017439 214 RAQELVPGGLLLLLTP 229 (371)
Q Consensus 214 Ra~EL~pGG~lvl~~~ 229 (371)
-.+-|+|||+|++...
T Consensus 181 ~~~~LkpgG~lv~~~~ 196 (314)
T 1uir_A 181 VKAHLNPGGVMGMQTG 196 (314)
T ss_dssp HHHTEEEEEEEEEEEE
T ss_pred HHHhcCCCcEEEEEcc
Confidence 7899999999999764
|
| >2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A | Back alignment and structure |
|---|
Probab=97.07 E-value=0.0012 Score=64.02 Aligned_cols=73 Identities=12% Similarity=0.136 Sum_probs=41.4
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC----CC-Ccceee
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV----PL-SKKYFA 137 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l----~~-~~~~f~ 137 (371)
+..+|+|+|||+|..++.+. + . + ..+|+..|+.. . -...+.. .- .+--+.
T Consensus 50 ~~~~VLDiGcGtG~ls~~la--------~-~-----------g---~~~V~~vD~s~-~-~~~a~~~~~~~~l~~~v~~~ 104 (348)
T 2y1w_A 50 KDKIVLDVGCGSGILSFFAA--------Q-A-----------G---ARKIYAVEAST-M-AQHAEVLVKSNNLTDRIVVI 104 (348)
T ss_dssp TTCEEEEETCTTSHHHHHHH--------H-T-----------T---CSEEEEEECST-H-HHHHHHHHHHTTCTTTEEEE
T ss_pred CcCEEEEcCCCccHHHHHHH--------h-C-----------C---CCEEEEECCHH-H-HHHHHHHHHHcCCCCcEEEE
Confidence 34699999999999887766 2 1 1 12577777642 2 2222211 11 112233
Q ss_pred eccCCCcccccCCCCceeEEEecCCcc
Q 017439 138 TGVPGSFHGRLFPESSLHVAHTSNALP 164 (371)
Q Consensus 138 ~gvpgSFy~rLfP~~Svd~~~Ss~alH 164 (371)
.+. +..+-+++++|+++|...++
T Consensus 105 ~~d----~~~~~~~~~~D~Ivs~~~~~ 127 (348)
T 2y1w_A 105 PGK----VEEVSLPEQVDIIISEPMGY 127 (348)
T ss_dssp ESC----TTTCCCSSCEEEEEECCCBT
T ss_pred Ecc----hhhCCCCCceeEEEEeCchh
Confidence 333 23333447899999987654
|
| >1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0033 Score=56.73 Aligned_cols=20 Identities=30% Similarity=0.265 Sum_probs=17.4
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~ 82 (371)
...+|+|+|||+|..++.+.
T Consensus 74 ~~~~VLDlGcG~G~~~~~la 93 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVA 93 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHH
T ss_pred CCCEEEEEcccCCHHHHHHH
Confidence 45699999999999998877
|
| >1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31 | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0059 Score=61.42 Aligned_cols=21 Identities=24% Similarity=0.207 Sum_probs=18.2
Q ss_pred CceEEeeecCCCCcccHHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAMQ 83 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~ 83 (371)
...+|+|+|||+|..++.+..
T Consensus 242 ~g~~VLDLGCGsG~la~~LA~ 262 (433)
T 1u2z_A 242 KGDTFMDLGSGVGNCVVQAAL 262 (433)
T ss_dssp TTCEEEEESCTTSHHHHHHHH
T ss_pred CCCEEEEeCCCcCHHHHHHHH
Confidence 457999999999999998774
|
| >2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0024 Score=61.19 Aligned_cols=19 Identities=11% Similarity=0.198 Sum_probs=17.0
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~ 82 (371)
..+|+|+|||+|..|+.+.
T Consensus 106 g~~VLDiG~G~G~~~~~la 124 (336)
T 2b25_A 106 GDTVLEAGSGSGGMSLFLS 124 (336)
T ss_dssp TCEEEEECCTTSHHHHHHH
T ss_pred CCEEEEeCCCcCHHHHHHH
Confidence 4699999999999999877
|
| >1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0016 Score=58.30 Aligned_cols=20 Identities=15% Similarity=0.149 Sum_probs=17.5
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~ 82 (371)
...+|+|+|||+|..++.+.
T Consensus 73 ~~~~vLDlG~G~G~~~~~la 92 (227)
T 1g8a_A 73 PGKSVLYLGIASGTTASHVS 92 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHH
T ss_pred CCCEEEEEeccCCHHHHHHH
Confidence 34699999999999998877
|
| >3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae} | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0013 Score=61.67 Aligned_cols=108 Identities=16% Similarity=0.137 Sum_probs=62.2
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhc-C-----CC---C--
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKS-V-----PL---S-- 132 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~-l-----~~---~-- 132 (371)
..+|+|+|||+|..++.+. . .. .-+|+..|+++.+.-...+. + .. .
T Consensus 80 ~~~vLDlG~G~G~~~~~~a--------~--~~-------------~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~ 136 (281)
T 3bzb_A 80 GKTVCELGAGAGLVSIVAF--------L--AG-------------ADQVVATDYPDPEILNSLESNIREHTANSCSSETV 136 (281)
T ss_dssp TCEEEETTCTTSHHHHHHH--------H--TT-------------CSEEEEEECSCHHHHHHHHHHHHTTCC--------
T ss_pred CCeEEEecccccHHHHHHH--------H--cC-------------CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccC
Confidence 4599999999999888665 2 10 11577888743222111111 1 00 0
Q ss_pred --cce-eeeccCCCcccccC---CCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhh
Q 017439 133 --KKY-FATGVPGSFHGRLF---PESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKND 206 (371)
Q Consensus 133 --~~~-f~~gvpgSFy~rLf---P~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D 206 (371)
.++ +....-|.....+. +++++|+|+++.++++...
T Consensus 137 ~~~~v~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~-------------------------------------- 178 (281)
T 3bzb_A 137 KRASPKVVPYRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQA-------------------------------------- 178 (281)
T ss_dssp --CCCEEEECCTTSCTHHHHHHHSCSSBSEEEEESCCSCGGG--------------------------------------
T ss_pred CCCCeEEEEecCCCccHHHHhhccCCCCCEEEEeCcccChHH--------------------------------------
Confidence 112 22222233233333 5789999999999888222
Q ss_pred HHHHHHHHHhhcc---c--CceEEEEecCcC
Q 017439 207 IESFLNARAQELV---P--GGLLLLLTPTIR 232 (371)
Q Consensus 207 ~~~FL~~Ra~EL~---p--GG~lvl~~~gr~ 232 (371)
...+|+.-.+-|+ | ||++++.+..+.
T Consensus 179 ~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~ 209 (281)
T 3bzb_A 179 HDALLRSVKMLLALPANDPTAVALVTFTHHR 209 (281)
T ss_dssp HHHHHHHHHHHBCCTTTCTTCEEEEEECC--
T ss_pred HHHHHHHHHHHhcccCCCCCCEEEEEEEeee
Confidence 2335666677899 9 999988876543
|
| >2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A* | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0045 Score=58.99 Aligned_cols=106 Identities=8% Similarity=0.069 Sum_probs=59.2
Q ss_pred CceEEeeecCCCCccc----HHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCccee-e
Q 017439 63 STFKIADLGCSTGPNT----FIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYF-A 137 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns----~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f-~ 137 (371)
...+|+|+|||+|.+. ..+. + +.. + .-+|+..|+-.. ++ +--| +
T Consensus 63 ~g~~VLDLGcGsg~~~GpGs~~~a--------~-~~~---------~---~~~V~gvDis~~--------v~--~v~~~i 111 (290)
T 2xyq_A 63 YNMRVIHFGAGSDKGVAPGTAVLR--------Q-WLP---------T---GTLLVDSDLNDF--------VS--DADSTL 111 (290)
T ss_dssp TTCEEEEESCCCTTSBCHHHHHHH--------H-HSC---------T---TCEEEEEESSCC--------BC--SSSEEE
T ss_pred CCCEEEEeCCCCCCCCCcHHHHHH--------H-HcC---------C---CCEEEEEECCCC--------CC--CCEEEE
Confidence 4579999999885554 2111 2 221 1 236777787655 22 2234 4
Q ss_pred eccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 138 TGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 138 ~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
.|. . ..+.+++++|+|+|+.+.+|.-... .+. .++ ...+...|+.-.+-
T Consensus 112 ~gD---~-~~~~~~~~fD~Vvsn~~~~~~g~~~---~d~-----~~~-------------------~~l~~~~l~~a~r~ 160 (290)
T 2xyq_A 112 IGD---C-ATVHTANKWDLIISDMYDPRTKHVT---KEN-----DSK-------------------EGFFTYLCGFIKQK 160 (290)
T ss_dssp ESC---G-GGCCCSSCEEEEEECCCCCC---CC---SCC-----CCC-------------------CTHHHHHHHHHHHH
T ss_pred ECc---c-ccCCccCcccEEEEcCCcccccccc---ccc-----cch-------------------HHHHHHHHHHHHHh
Confidence 443 2 2233347899999987665521110 010 000 12344567777889
Q ss_pred cccCceEEEEecC
Q 017439 218 LVPGGLLLLLTPT 230 (371)
Q Consensus 218 L~pGG~lvl~~~g 230 (371)
|+|||+|++....
T Consensus 161 LkpGG~~v~~~~~ 173 (290)
T 2xyq_A 161 LALGGSIAVKITE 173 (290)
T ss_dssp EEEEEEEEEEECS
T ss_pred cCCCcEEEEEEec
Confidence 9999999997643
|
| >2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=96.97 E-value=0.0025 Score=54.18 Aligned_cols=20 Identities=25% Similarity=0.415 Sum_probs=17.3
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~ 82 (371)
...+|+|+|||+|..++.+.
T Consensus 35 ~~~~vLdiG~G~G~~~~~l~ 54 (183)
T 2yxd_A 35 KDDVVVDVGCGSGGMTVEIA 54 (183)
T ss_dssp TTCEEEEESCCCSHHHHHHH
T ss_pred CCCEEEEeCCCCCHHHHHHH
Confidence 34699999999999998876
|
| >2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46 | Back alignment and structure |
|---|
Probab=96.97 E-value=0.00063 Score=58.44 Aligned_cols=20 Identities=20% Similarity=0.169 Sum_probs=17.1
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~ 82 (371)
..-+|+|+|||+|..++.+.
T Consensus 31 ~~~~vLDlGcG~G~~~~~l~ 50 (177)
T 2esr_A 31 NGGRVLDLFAGSGGLAIEAV 50 (177)
T ss_dssp CSCEEEEETCTTCHHHHHHH
T ss_pred CCCeEEEeCCCCCHHHHHHH
Confidence 34689999999999998776
|
| >2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0019 Score=59.02 Aligned_cols=114 Identities=18% Similarity=0.230 Sum_probs=62.1
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhh---hhcC--------CC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTL---FKSV--------PL 131 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~l---F~~l--------~~ 131 (371)
+.-+|+|+|||+|..++.+.. . .| ...|+..|.-..--... ++.. ..
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~---------~----------~~---~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~ 106 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSP---------A----------FP---EDLILGMEIRVQVTNYVEDRIIALRNNTASKHGF 106 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHH---------H----------ST---TSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTT
T ss_pred CCCEEEEEcCCCCHHHHHHHH---------h----------CC---CCCEEEEEcCHHHHHHHHHHHHHHhhccccccCC
Confidence 457999999999999988772 1 11 23455556443221111 0000 00
Q ss_pred CcceeeeccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHH
Q 017439 132 SKKYFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFL 211 (371)
Q Consensus 132 ~~~~f~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL 211 (371)
.+--|..+..-.+....++.+++|.++....=-|..+. .. +.++. . ..||
T Consensus 107 ~nv~~~~~D~~~~l~~~~~~~~~d~v~~~~p~p~~k~~----~~-------~~r~~----~---------------~~~l 156 (246)
T 2vdv_E 107 QNINVLRGNAMKFLPNFFEKGQLSKMFFCFPDPHFKQR----KH-------KARII----T---------------NTLL 156 (246)
T ss_dssp TTEEEEECCTTSCGGGTSCTTCEEEEEEESCCCC-----------------CSSCC----C---------------HHHH
T ss_pred CcEEEEeccHHHHHHHhccccccCEEEEECCCcccccc----hh-------HHhhc----c---------------HHHH
Confidence 11234444444445566889999999865433331110 00 00000 0 2467
Q ss_pred HHHHhhcccCceEEEEe
Q 017439 212 NARAQELVPGGLLLLLT 228 (371)
Q Consensus 212 ~~Ra~EL~pGG~lvl~~ 228 (371)
+.-++-|+|||++++.+
T Consensus 157 ~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 157 SEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp HHHHHHEEEEEEEEEEE
T ss_pred HHHHHHcCCCCEEEEEe
Confidence 77778999999999965
|
| >2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46 | Back alignment and structure |
|---|
Probab=96.93 E-value=0.00048 Score=59.29 Aligned_cols=20 Identities=20% Similarity=0.042 Sum_probs=17.2
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~ 82 (371)
...+|+|+|||+|..++.++
T Consensus 44 ~~~~vLD~GcG~G~~~~~~~ 63 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLAIEAV 63 (187)
T ss_dssp SSCEEEETTCTTCHHHHHHH
T ss_pred CCCCEEEeCCccCHHHHHHH
Confidence 34699999999999998766
|
| >2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54 | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0033 Score=57.36 Aligned_cols=21 Identities=10% Similarity=-0.066 Sum_probs=17.8
Q ss_pred CceEEeeecCCCCcccHHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAMQ 83 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~ 83 (371)
...+|+|+|||+|..++.+..
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~ 85 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGA 85 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHH
T ss_pred CCCEEEEeCCChhHHHHHHHH
Confidence 457999999999999988763
|
| >3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C* | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0076 Score=54.75 Aligned_cols=100 Identities=17% Similarity=0.227 Sum_probs=59.7
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CCCc-ceeee
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PLSK-KYFAT 138 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~~~-~~f~~ 138 (371)
..-+|+|+|||+|..++.+. + ... | ..+++..|+...-....=+.+ .-.. --+..
T Consensus 93 ~~~~vldiG~G~G~~~~~l~--------~-~~~---------~---~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~ 151 (255)
T 3mb5_A 93 PGDFIVEAGVGSGALTLFLA--------N-IVG---------P---EGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKL 151 (255)
T ss_dssp TTCEEEEECCTTSHHHHHHH--------H-HHC---------T---TSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEEC
T ss_pred CCCEEEEecCCchHHHHHHH--------H-HhC---------C---CeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEE
Confidence 45789999999999998877 2 211 1 235777777543322221111 1111 22333
Q ss_pred ccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 139 GVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 139 gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
+ .+. ..+|++++|++++. .|.. ..+|+.-.+-|
T Consensus 152 ~---d~~-~~~~~~~~D~v~~~--------~~~~-----------------------------------~~~l~~~~~~L 184 (255)
T 3mb5_A 152 K---DIY-EGIEEENVDHVILD--------LPQP-----------------------------------ERVVEHAAKAL 184 (255)
T ss_dssp S---CGG-GCCCCCSEEEEEEC--------SSCG-----------------------------------GGGHHHHHHHE
T ss_pred C---chh-hccCCCCcCEEEEC--------CCCH-----------------------------------HHHHHHHHHHc
Confidence 3 333 44788999999983 1211 11466667889
Q ss_pred ccCceEEEEecC
Q 017439 219 VPGGLLLLLTPT 230 (371)
Q Consensus 219 ~pGG~lvl~~~g 230 (371)
+|||++++....
T Consensus 185 ~~gG~l~~~~~~ 196 (255)
T 3mb5_A 185 KPGGFFVAYTPC 196 (255)
T ss_dssp EEEEEEEEEESS
T ss_pred CCCCEEEEEECC
Confidence 999999987643
|
| >3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A* | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0041 Score=59.56 Aligned_cols=99 Identities=9% Similarity=-0.007 Sum_probs=57.9
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCch---hhhhhcCCCCcceeee
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDF---NTLFKSVPLSKKYFAT 138 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDF---n~lF~~l~~~~~~f~~ 138 (371)
...-+|+|+|||+|+.|...+. +. + ..+|+--|.-..-- ...++...-.+--|..
T Consensus 121 ~~g~rVLDIGcG~G~~ta~~lA---------~~----------~---ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~ 178 (298)
T 3fpf_A 121 RRGERAVFIGGGPLPLTGILLS---------HV----------Y---GMRVNVVEIEPDIAELSRKVIEGLGVDGVNVIT 178 (298)
T ss_dssp CTTCEEEEECCCSSCHHHHHHH---------HT----------T---CCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEE
T ss_pred CCcCEEEEECCCccHHHHHHHH---------Hc----------c---CCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEE
Confidence 3468999999999998876652 11 1 12455555543221 1111111112223555
Q ss_pred ccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 139 GVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 139 gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
|.... +|++++|++++... +| |...+|+.-.+-|
T Consensus 179 gDa~~-----l~d~~FDvV~~~a~------~~-----------------------------------d~~~~l~el~r~L 212 (298)
T 3fpf_A 179 GDETV-----IDGLEFDVLMVAAL------AE-----------------------------------PKRRVFRNIHRYV 212 (298)
T ss_dssp SCGGG-----GGGCCCSEEEECTT------CS-----------------------------------CHHHHHHHHHHHC
T ss_pred Cchhh-----CCCCCcCEEEECCC------cc-----------------------------------CHHHHHHHHHHHc
Confidence 54322 36789999998654 22 1233677777899
Q ss_pred ccCceEEEEe
Q 017439 219 VPGGLLLLLT 228 (371)
Q Consensus 219 ~pGG~lvl~~ 228 (371)
+|||++++..
T Consensus 213 kPGG~Lvv~~ 222 (298)
T 3fpf_A 213 DTETRIIYRT 222 (298)
T ss_dssp CTTCEEEEEE
T ss_pred CCCcEEEEEc
Confidence 9999999875
|
| >3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ... | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0011 Score=59.39 Aligned_cols=19 Identities=16% Similarity=0.174 Sum_probs=17.2
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~ 82 (371)
..+|+|+|||+|..|+.+.
T Consensus 59 ~~~vLdiG~G~G~~~~~la 77 (221)
T 3u81_A 59 PSLVLELGAYCGYSAVRMA 77 (221)
T ss_dssp CSEEEEECCTTSHHHHHHH
T ss_pred CCEEEEECCCCCHHHHHHH
Confidence 4699999999999999877
|
| >1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7 | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0019 Score=58.04 Aligned_cols=19 Identities=26% Similarity=0.252 Sum_probs=16.9
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~ 82 (371)
..+|+|+|||+|..|..+.
T Consensus 85 ~~~VLdiG~G~G~~~~~la 103 (227)
T 1r18_A 85 GARILDVGSGSGYLTACFY 103 (227)
T ss_dssp TCEEEEESCTTSHHHHHHH
T ss_pred CCEEEEECCCccHHHHHHH
Confidence 4699999999999998776
|
| >2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=96.81 E-value=0.00066 Score=60.84 Aligned_cols=82 Identities=12% Similarity=0.025 Sum_probs=45.2
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---C-----CCcce
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---P-----LSKKY 135 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~-----~~~~~ 135 (371)
..+|+|+|||+|..+..+. + .... .. .| ..+|+..|.-..--...-+.+ . ..+-.
T Consensus 81 ~~~VLdiG~G~G~~~~~la--------~-~~~~---~~--~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~ 143 (227)
T 2pbf_A 81 GSRAIDVGSGSGYLTVCMA--------I-KMNV---LE--NK---NSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFK 143 (227)
T ss_dssp TCEEEEESCTTSHHHHHHH--------H-HTTT---TT--CT---TCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEE
T ss_pred CCEEEEECCCCCHHHHHHH--------H-Hhcc---cC--CC---CCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEE
Confidence 4699999999999888776 2 2110 00 12 346777776443221111111 1 11223
Q ss_pred eeeccCCCccccc----CCCCceeEEEecCCccc
Q 017439 136 FATGVPGSFHGRL----FPESSLHVAHTSNALPW 165 (371)
Q Consensus 136 f~~gvpgSFy~rL----fP~~Svd~~~Ss~alHW 165 (371)
|..+. ...-+ ++.+++|++++..++|+
T Consensus 144 ~~~~d---~~~~~~~~~~~~~~fD~I~~~~~~~~ 174 (227)
T 2pbf_A 144 IIHKN---IYQVNEEEKKELGLFDAIHVGASASE 174 (227)
T ss_dssp EEECC---GGGCCHHHHHHHCCEEEEEECSBBSS
T ss_pred EEECC---hHhcccccCccCCCcCEEEECCchHH
Confidence 33333 22222 45678999999999987
|
| >3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus} | Back alignment and structure |
|---|
Probab=96.81 E-value=0.011 Score=52.47 Aligned_cols=21 Identities=14% Similarity=0.058 Sum_probs=17.8
Q ss_pred CceEEeeecCCCCcccHHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAMQ 83 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~ 83 (371)
..-+|+|+|||+|..++.+..
T Consensus 55 ~~~~vLDlGcG~G~~~~~la~ 75 (204)
T 3njr_A 55 RGELLWDIGGGSGSVSVEWCL 75 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHH
T ss_pred CCCEEEEecCCCCHHHHHHHH
Confidence 357999999999999988773
|
| >3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0 | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0028 Score=56.13 Aligned_cols=25 Identities=20% Similarity=0.131 Sum_probs=19.3
Q ss_pred hHHHHHHHHHhhcccCceEEEEecC
Q 017439 206 DIESFLNARAQELVPGGLLLLLTPT 230 (371)
Q Consensus 206 D~~~FL~~Ra~EL~pGG~lvl~~~g 230 (371)
.....|+.-.+-|+|||+|++.+..
T Consensus 117 l~~~~l~~a~~~LkpGG~lv~k~~~ 141 (191)
T 3dou_A 117 IGQRVMEIAVRYLRNGGNVLLKQFQ 141 (191)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHccCCCEEEEEEcC
Confidence 3445677777899999999987753
|
| >1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0048 Score=56.95 Aligned_cols=100 Identities=18% Similarity=0.230 Sum_probs=58.6
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC------CCcceee
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP------LSKKYFA 137 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~------~~~~~f~ 137 (371)
.-+|+|+|||+|..+..+. + .+. | ..+++..|.-..-....=+.+. ..+--+.
T Consensus 100 ~~~vLdiG~G~G~~~~~l~--------~-~~~---------~---~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~ 158 (280)
T 1i9g_A 100 GARVLEAGAGSGALTLSLL--------R-AVG---------P---AGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLV 158 (280)
T ss_dssp TCEEEEECCTTSHHHHHHH--------H-HHC---------T---TSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEE
T ss_pred CCEEEEEcccccHHHHHHH--------H-HhC---------C---CCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEE
Confidence 4689999999999998777 2 121 1 2356677764332221111110 0111222
Q ss_pred eccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 138 TGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 138 ~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
. +.+.+..+|++++|++++.. |.. ..+|+.-.+-
T Consensus 159 ~---~d~~~~~~~~~~~D~v~~~~--------~~~-----------------------------------~~~l~~~~~~ 192 (280)
T 1i9g_A 159 V---SDLADSELPDGSVDRAVLDM--------LAP-----------------------------------WEVLDAVSRL 192 (280)
T ss_dssp C---SCGGGCCCCTTCEEEEEEES--------SCG-----------------------------------GGGHHHHHHH
T ss_pred E---CchHhcCCCCCceeEEEECC--------cCH-----------------------------------HHHHHHHHHh
Confidence 2 34444456788999999832 210 0146666788
Q ss_pred cccCceEEEEecC
Q 017439 218 LVPGGLLLLLTPT 230 (371)
Q Consensus 218 L~pGG~lvl~~~g 230 (371)
|+|||++++..+.
T Consensus 193 L~pgG~l~~~~~~ 205 (280)
T 1i9g_A 193 LVAGGVLMVYVAT 205 (280)
T ss_dssp EEEEEEEEEEESS
T ss_pred CCCCCEEEEEeCC
Confidence 9999999998854
|
| >3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0042 Score=67.16 Aligned_cols=108 Identities=14% Similarity=0.109 Sum_probs=66.1
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC----C----C-Cc
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV----P----L-SK 133 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l----~----~-~~ 133 (371)
...+|+|+|||+|..++.+. + .. .| ..+|+.-|+-..--...=+.+ . . .+
T Consensus 721 ~g~rVLDVGCGTG~lai~LA--------r-~g---------~p---~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~n 779 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLL--------D-YP---------TS---LQTIIGVDISPKGLARAAKMLHVKLNKEACNVKS 779 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHT--------S-SC---------CC---CCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSE
T ss_pred CCCEEEEECCCCCHHHHHHH--------H-hC---------CC---CCeEEEEECCHHHHHHHHHHhhhccchhhcCCCc
Confidence 35799999999999988766 2 11 11 235666666554322221111 0 0 11
Q ss_pred ceeeeccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHH
Q 017439 134 KYFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNA 213 (371)
Q Consensus 134 ~~f~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~ 213 (371)
--|..|. ...--++.+++|+|+++.++||+.. .+...||+.
T Consensus 780 VefiqGD---a~dLp~~d~sFDlVV~~eVLeHL~d------------------------------------p~l~~~L~e 820 (950)
T 3htx_A 780 ATLYDGS---ILEFDSRLHDVDIGTCLEVIEHMEE------------------------------------DQACEFGEK 820 (950)
T ss_dssp EEEEESC---TTSCCTTSCSCCEEEEESCGGGSCH------------------------------------HHHHHHHHH
T ss_pred eEEEECc---hHhCCcccCCeeEEEEeCchhhCCh------------------------------------HHHHHHHHH
Confidence 2233333 2333346789999999999999533 122346777
Q ss_pred HHhhcccCceEEEEecCc
Q 017439 214 RAQELVPGGLLLLLTPTI 231 (371)
Q Consensus 214 Ra~EL~pGG~lvl~~~gr 231 (371)
-.+-|+|| .+++..+.+
T Consensus 821 I~RvLKPG-~LIISTPN~ 837 (950)
T 3htx_A 821 VLSLFHPK-LLIVSTPNY 837 (950)
T ss_dssp HHHTTCCS-EEEEEECBG
T ss_pred HHHHcCCC-EEEEEecCc
Confidence 78899999 888877654
|
| >2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0012 Score=59.44 Aligned_cols=19 Identities=16% Similarity=0.310 Sum_probs=16.7
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~ 82 (371)
..+|+|+|||+|..++.+.
T Consensus 55 ~~~vLdiG~G~G~~~~~la 73 (233)
T 2gpy_A 55 PARILEIGTAIGYSAIRMA 73 (233)
T ss_dssp CSEEEEECCTTSHHHHHHH
T ss_pred CCEEEEecCCCcHHHHHHH
Confidence 4599999999999998776
|
| >3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A* | Back alignment and structure |
|---|
Probab=96.76 E-value=0.002 Score=59.63 Aligned_cols=21 Identities=19% Similarity=0.330 Sum_probs=18.3
Q ss_pred CCceEEeeecCCCCcccHHHH
Q 017439 62 SSTFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~ 82 (371)
....+|+|+|||+|..++.+.
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la 99 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLK 99 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHH
T ss_pred CCCCEEEEEcCCCCHHHHHHH
Confidence 456799999999999998876
|
| >1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A* | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0022 Score=57.27 Aligned_cols=20 Identities=25% Similarity=0.172 Sum_probs=17.3
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~ 82 (371)
...+|+|+|||+|..|..+.
T Consensus 77 ~~~~vLDiG~G~G~~~~~la 96 (226)
T 1i1n_A 77 EGAKALDVGSGSGILTACFA 96 (226)
T ss_dssp TTCEEEEETCTTSHHHHHHH
T ss_pred CCCEEEEEcCCcCHHHHHHH
Confidence 34699999999999998776
|
| >2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A* | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0028 Score=60.64 Aligned_cols=19 Identities=32% Similarity=0.569 Sum_probs=17.1
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~ 82 (371)
..+|+|+|||+|..|..+.
T Consensus 83 g~~VLDlGcG~G~~s~~la 101 (305)
T 2p41_A 83 EGKVVDLGCGRGGWSYYCG 101 (305)
T ss_dssp CEEEEEETCTTSHHHHHHH
T ss_pred CCEEEEEcCCCCHHHHHHH
Confidence 4799999999999998777
|
| >1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46 | Back alignment and structure |
|---|
Probab=96.72 E-value=0.00076 Score=57.07 Aligned_cols=19 Identities=16% Similarity=0.025 Sum_probs=16.7
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~ 82 (371)
.-+|+|+|||+|..++.+.
T Consensus 42 ~~~vLD~GcG~G~~~~~l~ 60 (171)
T 1ws6_A 42 RGRFLDPFAGSGAVGLEAA 60 (171)
T ss_dssp CCEEEEETCSSCHHHHHHH
T ss_pred CCeEEEeCCCcCHHHHHHH
Confidence 4689999999999988776
|
| >1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0033 Score=58.45 Aligned_cols=100 Identities=10% Similarity=0.211 Sum_probs=59.5
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC----CCCcceee
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV----PLSKKYFA 137 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l----~~~~~~f~ 137 (371)
....+|+|+|||+|..++.+. + .. .| ..+|+.-|.-..--...-+.+ ...+--|.
T Consensus 109 ~~~~~VLD~G~G~G~~~~~la--------~-~~---------~~---~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~ 167 (275)
T 1yb2_A 109 RPGMDILEVGVGSGNMSSYIL--------Y-AL---------NG---KGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTS 167 (275)
T ss_dssp CTTCEEEEECCTTSHHHHHHH--------H-HH---------TT---SSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEE
T ss_pred CCcCEEEEecCCCCHHHHHHH--------H-Hc---------CC---CCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEE
Confidence 345799999999999988776 2 11 11 235777776443322221111 11122233
Q ss_pred eccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 138 TGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 138 ~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
.+. +.. .+|++++|++++ | +|.. ..+|+.-.+-
T Consensus 168 ~~d---~~~-~~~~~~fD~Vi~----~----~~~~-----------------------------------~~~l~~~~~~ 200 (275)
T 1yb2_A 168 RSD---IAD-FISDQMYDAVIA----D----IPDP-----------------------------------WNHVQKIASM 200 (275)
T ss_dssp CSC---TTT-CCCSCCEEEEEE----C----CSCG-----------------------------------GGSHHHHHHT
T ss_pred ECc---hhc-cCcCCCccEEEE----c----CcCH-----------------------------------HHHHHHHHHH
Confidence 333 333 567889999998 2 2311 0256777788
Q ss_pred cccCceEEEEec
Q 017439 218 LVPGGLLLLLTP 229 (371)
Q Consensus 218 L~pGG~lvl~~~ 229 (371)
|+|||++++...
T Consensus 201 LkpgG~l~i~~~ 212 (275)
T 1yb2_A 201 MKPGSVATFYLP 212 (275)
T ss_dssp EEEEEEEEEEES
T ss_pred cCCCCEEEEEeC
Confidence 999999999874
|
| >2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0016 Score=59.18 Aligned_cols=20 Identities=20% Similarity=0.310 Sum_probs=17.4
Q ss_pred ceEEeeecCCCCcccHHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAMQ 83 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~ 83 (371)
..+|+|+|||+|..++.+..
T Consensus 61 ~~~VLdiG~G~G~~~~~la~ 80 (239)
T 2hnk_A 61 AKRIIEIGTFTGYSSLCFAS 80 (239)
T ss_dssp CSEEEEECCTTCHHHHHHHH
T ss_pred cCEEEEEeCCCCHHHHHHHH
Confidence 46999999999999998773
|
| >3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0012 Score=59.84 Aligned_cols=100 Identities=11% Similarity=0.132 Sum_probs=58.9
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhh---hhcCCCC-cceeee
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTL---FKSVPLS-KKYFAT 138 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~l---F~~l~~~-~~~f~~ 138 (371)
+..+|+|+|||+|..|+.+. . . .| ..+|+..|.-..--... ++...-. +--|..
T Consensus 71 ~~~~vLDiG~G~G~~~~~la--------~-~----------~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~ 128 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFA--------S-I----------SD---DIHVTTIERNETMIQYAKQNLATYHFENQVRIIE 128 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHH--------T-T----------CT---TCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEE
T ss_pred CCCEEEEEeCchhHHHHHHH--------H-h----------CC---CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE
Confidence 35699999999999998776 2 1 12 23567777644322221 1111111 223444
Q ss_pred ccCCCcccccCC---CCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHH
Q 017439 139 GVPGSFHGRLFP---ESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARA 215 (371)
Q Consensus 139 gvpgSFy~rLfP---~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra 215 (371)
+... ...| ++++|++++... + .++..||+.-.
T Consensus 129 ~d~~----~~~~~~~~~~fD~V~~~~~-------~----------------------------------~~~~~~l~~~~ 163 (232)
T 3ntv_A 129 GNAL----EQFENVNDKVYDMIFIDAA-------K----------------------------------AQSKKFFEIYT 163 (232)
T ss_dssp SCGG----GCHHHHTTSCEEEEEEETT-------S----------------------------------SSHHHHHHHHG
T ss_pred CCHH----HHHHhhccCCccEEEEcCc-------H----------------------------------HHHHHHHHHHH
Confidence 4422 2233 689999996521 1 12333677777
Q ss_pred hhcccCceEEEEec
Q 017439 216 QELVPGGLLLLLTP 229 (371)
Q Consensus 216 ~EL~pGG~lvl~~~ 229 (371)
+-|+|||++++...
T Consensus 164 ~~LkpgG~lv~d~~ 177 (232)
T 3ntv_A 164 PLLKHQGLVITDNV 177 (232)
T ss_dssp GGEEEEEEEEEECT
T ss_pred HhcCCCeEEEEeeC
Confidence 99999999988543
|
| >2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A* | Back alignment and structure |
|---|
Probab=96.65 E-value=0.002 Score=60.72 Aligned_cols=108 Identities=11% Similarity=0.049 Sum_probs=62.1
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC-------CCcce
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP-------LSKKY 135 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~-------~~~~~ 135 (371)
++.+|+|+|||+|..+..+. + . .| ..++...|+-..--...=+.++ ..+--
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~--------~--~---------~~---~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~ 135 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELC--------K--Y---------KS---VENIDICEIDETVIEVSKIYFKNISCGYEDKRVN 135 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHT--------T--C---------TT---CCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEE
T ss_pred CCCeEEEEeCCcCHHHHHHH--------H--c---------CC---CCEEEEEECCHHHHHHHHHHhHHhccccCCCcEE
Confidence 45799999999999988776 2 1 11 2245566654322111111111 11223
Q ss_pred eeeccCCCcccccCCCCceeEEEecCCccccCCCCc-cccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHH
Q 017439 136 FATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPK-EITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNAR 214 (371)
Q Consensus 136 f~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~-~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~R 214 (371)
+..+....|-.. .++++|+|++....+| .|. .+.. ..|++.-
T Consensus 136 ~~~~D~~~~l~~--~~~~fD~Ii~d~~~~~---~~~~~l~~--------------------------------~~~l~~~ 178 (283)
T 2i7c_A 136 VFIEDASKFLEN--VTNTYDVIIVDSSDPI---GPAETLFN--------------------------------QNFYEKI 178 (283)
T ss_dssp EEESCHHHHHHH--CCSCEEEEEEECCCTT---TGGGGGSS--------------------------------HHHHHHH
T ss_pred EEECChHHHHHh--CCCCceEEEEcCCCCC---CcchhhhH--------------------------------HHHHHHH
Confidence 444443333222 2678999999776665 221 1100 3477888
Q ss_pred HhhcccCceEEEEec
Q 017439 215 AQELVPGGLLLLLTP 229 (371)
Q Consensus 215 a~EL~pGG~lvl~~~ 229 (371)
.+-|+|||+|++...
T Consensus 179 ~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 179 YNALKPNGYCVAQCE 193 (283)
T ss_dssp HHHEEEEEEEEEECC
T ss_pred HHhcCCCcEEEEECC
Confidence 889999999998853
|
| >2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A* | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0045 Score=58.34 Aligned_cols=20 Identities=30% Similarity=0.569 Sum_probs=17.4
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~ 82 (371)
...+|+|+|||+|..|..+.
T Consensus 82 ~g~~VLDlGcGtG~~s~~la 101 (276)
T 2wa2_A 82 LKGTVVDLGCGRGSWSYYAA 101 (276)
T ss_dssp CCEEEEEESCTTCHHHHHHH
T ss_pred CCCEEEEeccCCCHHHHHHH
Confidence 35799999999999988777
|
| >2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus} | Back alignment and structure |
|---|
Probab=96.63 E-value=0.0047 Score=57.85 Aligned_cols=20 Identities=35% Similarity=0.619 Sum_probs=17.3
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~ 82 (371)
...+|+|+|||+|..|..+.
T Consensus 74 ~g~~VLDlGcGtG~~s~~la 93 (265)
T 2oxt_A 74 LTGRVVDLGCGRGGWSYYAA 93 (265)
T ss_dssp CCEEEEEESCTTSHHHHHHH
T ss_pred CCCEEEEeCcCCCHHHHHHH
Confidence 35799999999999988776
|
| >2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=96.63 E-value=0.0069 Score=54.88 Aligned_cols=100 Identities=14% Similarity=0.145 Sum_probs=57.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC----CCCcceeee
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV----PLSKKYFAT 138 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l----~~~~~~f~~ 138 (371)
..-+|+|+|||+|..++.+. + .+. | ..+++..|.-..-....-+.+ ...+-.|..
T Consensus 96 ~~~~vLdiG~G~G~~~~~l~--------~-~~~---------~---~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~ 154 (258)
T 2pwy_A 96 PGMRVLEAGTGSGGLTLFLA--------R-AVG---------E---KGLVESYEARPHHLAQAERNVRAFWQVENVRFHL 154 (258)
T ss_dssp TTCEEEEECCTTSHHHHHHH--------H-HHC---------T---TSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEE
T ss_pred CCCEEEEECCCcCHHHHHHH--------H-HhC---------C---CCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 34699999999999988776 2 211 1 125666665433222221111 111112333
Q ss_pred ccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 139 GVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 139 gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
+ ++.+--+|++++|++++. + |.. ..+|+.-.+-|
T Consensus 155 ~---d~~~~~~~~~~~D~v~~~----~----~~~-----------------------------------~~~l~~~~~~L 188 (258)
T 2pwy_A 155 G---KLEEAELEEAAYDGVALD----L----MEP-----------------------------------WKVLEKAALAL 188 (258)
T ss_dssp S---CGGGCCCCTTCEEEEEEE----S----SCG-----------------------------------GGGHHHHHHHE
T ss_pred C---chhhcCCCCCCcCEEEEC----C----cCH-----------------------------------HHHHHHHHHhC
Confidence 3 233222678899999972 2 211 01567777889
Q ss_pred ccCceEEEEec
Q 017439 219 VPGGLLLLLTP 229 (371)
Q Consensus 219 ~pGG~lvl~~~ 229 (371)
+|||++++..+
T Consensus 189 ~~gG~l~~~~~ 199 (258)
T 2pwy_A 189 KPDRFLVAYLP 199 (258)
T ss_dssp EEEEEEEEEES
T ss_pred CCCCEEEEEeC
Confidence 99999999874
|
| >1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A* | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0014 Score=62.35 Aligned_cols=109 Identities=11% Similarity=0.047 Sum_probs=57.7
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhc-------CCCCcce
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKS-------VPLSKKY 135 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~-------l~~~~~~ 135 (371)
.+.+|+|+|||+|..+..++ + . .| .-+|...|+-..--...=+. +...+--
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~--------~--~---------~~---~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~ 147 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVL--------K--H---------DS---VEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAE 147 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHT--------T--S---------TT---CSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEE
T ss_pred CCCEEEEEcCCcCHHHHHHH--------h--c---------CC---CCEEEEEECCHHHHHHHHHHhHhhccccCCCceE
Confidence 34799999999999988776 2 1 11 22566666543211111111 1112223
Q ss_pred eeeccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHH
Q 017439 136 FATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARA 215 (371)
Q Consensus 136 f~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra 215 (371)
+..+....|-.+ +++++|+|++...-+|... +..+ ....||+.-+
T Consensus 148 ~~~~D~~~~l~~--~~~~fD~Ii~d~~~~~~~~-~~~l--------------------------------~~~~~l~~~~ 192 (296)
T 1inl_A 148 IVIANGAEYVRK--FKNEFDVIIIDSTDPTAGQ-GGHL--------------------------------FTEEFYQACY 192 (296)
T ss_dssp EEESCHHHHGGG--CSSCEEEEEEEC-----------C--------------------------------CSHHHHHHHH
T ss_pred EEECcHHHHHhh--CCCCceEEEEcCCCcccCc-hhhh--------------------------------hHHHHHHHHH
Confidence 444443333222 3678999998766555321 1100 1134677777
Q ss_pred hhcccCceEEEEe
Q 017439 216 QELVPGGLLLLLT 228 (371)
Q Consensus 216 ~EL~pGG~lvl~~ 228 (371)
+-|+|||+|++..
T Consensus 193 ~~LkpgG~lv~~~ 205 (296)
T 1inl_A 193 DALKEDGVFSAET 205 (296)
T ss_dssp HHEEEEEEEEEEC
T ss_pred HhcCCCcEEEEEc
Confidence 8999999999975
|
| >1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38 | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0086 Score=57.22 Aligned_cols=125 Identities=13% Similarity=0.059 Sum_probs=66.6
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC---CCcceeeecc
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP---LSKKYFATGV 140 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~---~~~~~f~~gv 140 (371)
..+|+|+|||+|..|+.+. + .+. + .-+|+..|.-..--..+-+.+. ..+-.+..+.
T Consensus 119 g~~VLDlg~G~G~~t~~la--------~-~~~---------~---~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D 177 (315)
T 1ixk_A 119 GEIVADMAAAPGGKTSYLA--------Q-LMR---------N---DGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSS 177 (315)
T ss_dssp TCEEEECCSSCSHHHHHHH--------H-HTT---------T---CSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSC
T ss_pred CCEEEEeCCCCCHHHHHHH--------H-HhC---------C---CCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECC
Confidence 4689999999999999877 2 221 1 2357777766554333333221 1112233333
Q ss_pred CCCcccccCCCCceeEEEecC---CccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 141 PGSFHGRLFPESSLHVAHTSN---ALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~---alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
...+- .+++++|.|++.. .+.-+.+.|..... -+++.. ....+.-..+|+.-++-
T Consensus 178 ~~~~~---~~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~---------------~~~~~~----~~~~~~q~~~L~~~~~~ 235 (315)
T 1ixk_A 178 SLHIG---ELNVEFDKILLDAPCTGSGTIHKNPERKWN---------------RTMDDI----KFCQGLQMRLLEKGLEV 235 (315)
T ss_dssp GGGGG---GGCCCEEEEEEECCTTSTTTCC-----------------------CCHHHH----HHHHHHHHHHHHHHHHH
T ss_pred hhhcc---cccccCCEEEEeCCCCCcccccCChhHhhc---------------CCHHHH----HHHHHHHHHHHHHHHHh
Confidence 22211 1357899999842 22222233432110 011211 12234446788888899
Q ss_pred cccCceEEEEecCc
Q 017439 218 LVPGGLLLLLTPTI 231 (371)
Q Consensus 218 L~pGG~lvl~~~gr 231 (371)
|+|||+|++.++..
T Consensus 236 LkpGG~lv~stcs~ 249 (315)
T 1ixk_A 236 LKPGGILVYSTCSL 249 (315)
T ss_dssp EEEEEEEEEEESCC
T ss_pred CCCCCEEEEEeCCC
Confidence 99999999987643
|
| >3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=96.60 E-value=0.0014 Score=60.18 Aligned_cols=106 Identities=10% Similarity=0.061 Sum_probs=61.5
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhh---hhcCCCC-cceeee
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTL---FKSVPLS-KKYFAT 138 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~l---F~~l~~~-~~~f~~ 138 (371)
+..+|+|+|||+|..|+.+. + .+ .| .-+|+..|+-..-.... ++...-. +--|..
T Consensus 63 ~~~~VLdiG~G~G~~~~~la--------~-~~---------~~---~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~ 121 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMA--------R-EL---------PA---DGQLLTLEADAHHAQVARENLQLAGVDQRVTLRE 121 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHH--------T-TS---------CT---TCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEE
T ss_pred CCCEEEEecCCchHHHHHHH--------H-hC---------CC---CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE
Confidence 35799999999999998777 3 22 11 23577777644332221 2211211 223444
Q ss_pred ccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 139 GVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 139 gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
|....+...+...+++|+|++.... .+...+|+.-.+-|
T Consensus 122 ~d~~~~l~~~~~~~~fD~V~~d~~~-----------------------------------------~~~~~~l~~~~~~L 160 (248)
T 3tfw_A 122 GPALQSLESLGECPAFDLIFIDADK-----------------------------------------PNNPHYLRWALRYS 160 (248)
T ss_dssp SCHHHHHHTCCSCCCCSEEEECSCG-----------------------------------------GGHHHHHHHHHHTC
T ss_pred cCHHHHHHhcCCCCCeEEEEECCch-----------------------------------------HHHHHHHHHHHHhc
Confidence 4432333333335689999985421 11223566667899
Q ss_pred ccCceEEEEecC
Q 017439 219 VPGGLLLLLTPT 230 (371)
Q Consensus 219 ~pGG~lvl~~~g 230 (371)
+|||++++...-
T Consensus 161 kpGG~lv~~~~~ 172 (248)
T 3tfw_A 161 RPGTLIIGDNVV 172 (248)
T ss_dssp CTTCEEEEECCS
T ss_pred CCCeEEEEeCCC
Confidence 999999987653
|
| >1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A | Back alignment and structure |
|---|
Probab=96.59 E-value=0.0023 Score=62.05 Aligned_cols=109 Identities=17% Similarity=0.106 Sum_probs=62.2
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC-------CCcce
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP-------LSKKY 135 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~-------~~~~~ 135 (371)
.+.+|+|+|||+|..++.+. + . .| ..+|...|+-..--...=+.++ ..+--
T Consensus 120 ~~~~VLdIG~G~G~~a~~la--------~--~---------~~---~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~ 177 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVA--------R--H---------AS---IEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVN 177 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHT--------T--C---------TT---CCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEE
T ss_pred CCCEEEEECCCccHHHHHHH--------H--c---------CC---CCEEEEEECCHHHHHHHHHHHHhhccccCCCcEE
Confidence 45799999999999888776 2 1 12 2356666664432111111111 12223
Q ss_pred eeeccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHH
Q 017439 136 FATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARA 215 (371)
Q Consensus 136 f~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra 215 (371)
+..+....|-.+ ++++++|+|++....+|- .+..+ ....|++.-.
T Consensus 178 ~~~~D~~~~l~~-~~~~~fDlIi~d~~~p~~--~~~~l--------------------------------~~~~~l~~~~ 222 (334)
T 1xj5_A 178 LVIGDGVAFLKN-AAEGSYDAVIVDSSDPIG--PAKEL--------------------------------FEKPFFQSVA 222 (334)
T ss_dssp EEESCHHHHHHT-SCTTCEEEEEECCCCTTS--GGGGG--------------------------------GSHHHHHHHH
T ss_pred EEECCHHHHHHh-ccCCCccEEEECCCCccC--cchhh--------------------------------hHHHHHHHHH
Confidence 444443333222 356899999997654441 01100 0134777778
Q ss_pred hhcccCceEEEEe
Q 017439 216 QELVPGGLLLLLT 228 (371)
Q Consensus 216 ~EL~pGG~lvl~~ 228 (371)
+-|+|||+|++..
T Consensus 223 ~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 223 RALRPGGVVCTQA 235 (334)
T ss_dssp HHEEEEEEEEEEC
T ss_pred HhcCCCcEEEEec
Confidence 8999999999874
|
| >2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A* | Back alignment and structure |
|---|
Probab=96.59 E-value=0.0052 Score=56.18 Aligned_cols=18 Identities=22% Similarity=0.176 Sum_probs=16.4
Q ss_pred eEEeeecCCCCcccHHHH
Q 017439 65 FKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 65 ~~IaDlGCs~G~Ns~~~~ 82 (371)
-+|+|+|||+|..|+.+.
T Consensus 83 ~~VLDiG~GtG~~t~~la 100 (236)
T 2bm8_A 83 RTIVELGVYNGGSLAWFR 100 (236)
T ss_dssp SEEEEECCTTSHHHHHHH
T ss_pred CEEEEEeCCCCHHHHHHH
Confidence 599999999999999776
|
| >1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A* | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0025 Score=59.93 Aligned_cols=20 Identities=10% Similarity=0.150 Sum_probs=17.3
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~ 82 (371)
.+.+|+|+|||+|..+..++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~ 94 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVL 94 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHT
T ss_pred CCCeEEEEcCCcCHHHHHHH
Confidence 35799999999999988776
|
| >2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A* | Back alignment and structure |
|---|
Probab=96.54 E-value=0.02 Score=55.96 Aligned_cols=25 Identities=32% Similarity=0.640 Sum_probs=21.0
Q ss_pred hHHHHHHHHHhhcccCceEEEEecC
Q 017439 206 DIESFLNARAQELVPGGLLLLLTPT 230 (371)
Q Consensus 206 D~~~FL~~Ra~EL~pGG~lvl~~~g 230 (371)
.+..||+.-.+-|+|||++++.++.
T Consensus 142 ~~~~fl~~~~~~Lk~~G~~~~i~p~ 166 (421)
T 2ih2_A 142 LYGAFLEKAVRLLKPGGVLVFVVPA 166 (421)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred HHHHHHHHHHHHhCCCCEEEEEECh
Confidence 3457888888999999999999864
|
| >1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=96.54 E-value=0.0043 Score=57.59 Aligned_cols=98 Identities=14% Similarity=0.174 Sum_probs=58.1
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CC-Ccceeeec
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PL-SKKYFATG 139 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~-~~~~f~~g 139 (371)
..+|+|+|||+|..++.+. + .+. | ..+++..|.-..-....=+.+ .- .+--+..+
T Consensus 113 ~~~VLDiG~G~G~~~~~la--------~-~~~---------~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~ 171 (277)
T 1o54_A 113 GDRIIDTGVGSGAMCAVLA--------R-AVG---------S---SGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVR 171 (277)
T ss_dssp TCEEEEECCTTSHHHHHHH--------H-HTT---------T---TCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECC
T ss_pred CCEEEEECCcCCHHHHHHH--------H-HhC---------C---CcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEEC
Confidence 4699999999999988776 2 211 1 236777776443322221111 11 11123333
Q ss_pred cCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcc
Q 017439 140 VPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELV 219 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 219 (371)
.+.+ .+|++++|++++. .|.. ..+|+.-.+-|+
T Consensus 172 ---d~~~-~~~~~~~D~V~~~--------~~~~-----------------------------------~~~l~~~~~~L~ 204 (277)
T 1o54_A 172 ---DISE-GFDEKDVDALFLD--------VPDP-----------------------------------WNYIDKCWEALK 204 (277)
T ss_dssp ---CGGG-CCSCCSEEEEEEC--------CSCG-----------------------------------GGTHHHHHHHEE
T ss_pred ---CHHH-cccCCccCEEEEC--------CcCH-----------------------------------HHHHHHHHHHcC
Confidence 3333 3788899999983 1321 014666667899
Q ss_pred cCceEEEEec
Q 017439 220 PGGLLLLLTP 229 (371)
Q Consensus 220 pGG~lvl~~~ 229 (371)
|||++++...
T Consensus 205 pgG~l~~~~~ 214 (277)
T 1o54_A 205 GGGRFATVCP 214 (277)
T ss_dssp EEEEEEEEES
T ss_pred CCCEEEEEeC
Confidence 9999999874
|
| >1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17 | Back alignment and structure |
|---|
Probab=96.54 E-value=0.0043 Score=58.20 Aligned_cols=108 Identities=10% Similarity=0.024 Sum_probs=61.6
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhh---hh----cCCCCcce
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTL---FK----SVPLSKKY 135 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~l---F~----~l~~~~~~ 135 (371)
++.+|+|+|||+|..+..++ + . .| .-+|..-|+-..--... |. .+...+--
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~--------~--~---------~~---~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~ 132 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREIL--------K--H---------PS---VKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVD 132 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHT--------T--C---------TT---CSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEE
T ss_pred CCCEEEEECCchHHHHHHHH--------h--C---------CC---CceEEEEECCHHHHHHHHHHhHhhccccCCCceE
Confidence 46799999999999888766 2 1 11 12455555533211110 10 11122233
Q ss_pred eeeccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHH
Q 017439 136 FATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARA 215 (371)
Q Consensus 136 f~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra 215 (371)
+..+....|-.+ +++++|+|++....+|. .|..+.. ..|++.-.
T Consensus 133 v~~~D~~~~l~~--~~~~fD~Ii~d~~~~~~--~~~~l~~--------------------------------~~~~~~~~ 176 (275)
T 1iy9_A 133 VQVDDGFMHIAK--SENQYDVIMVDSTEPVG--PAVNLFT--------------------------------KGFYAGIA 176 (275)
T ss_dssp EEESCSHHHHHT--CCSCEEEEEESCSSCCS--CCCCCST--------------------------------THHHHHHH
T ss_pred EEECcHHHHHhh--CCCCeeEEEECCCCCCC--cchhhhH--------------------------------HHHHHHHH
Confidence 455554443322 46789999998776662 1211111 12666777
Q ss_pred hhcccCceEEEEe
Q 017439 216 QELVPGGLLLLLT 228 (371)
Q Consensus 216 ~EL~pGG~lvl~~ 228 (371)
+-|+|||+|++..
T Consensus 177 ~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 177 KALKEDGIFVAQT 189 (275)
T ss_dssp HHEEEEEEEEEEC
T ss_pred HhcCCCcEEEEEc
Confidence 8999999999985
|
| >2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17 | Back alignment and structure |
|---|
Probab=96.51 E-value=0.0023 Score=61.49 Aligned_cols=108 Identities=16% Similarity=0.114 Sum_probs=58.1
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC-------CCcce
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP-------LSKKY 135 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~-------~~~~~ 135 (371)
.+.+|+|+|||+|..+..++ + . .| ..+|...|+-..--...=+.++ ..+--
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~--------~--~---------~~---~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~ 165 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVL--------K--H---------ES---VEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLD 165 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHT--------T--C---------TT---CCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEE
T ss_pred CCCEEEEEcCCcCHHHHHHH--------H--c---------CC---CCEEEEEECCHHHHHHHHHHHHHhccccCCCCEE
Confidence 35799999999999988776 2 1 11 2356666654322111111111 11222
Q ss_pred eeeccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHH
Q 017439 136 FATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARA 215 (371)
Q Consensus 136 f~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra 215 (371)
+..+....|-.+ +++++|+|++...-|| .|.. ..|. ..|++.-.
T Consensus 166 ~~~~D~~~~l~~--~~~~fD~Ii~d~~~~~---~~~~------------------------~l~t-------~~~l~~~~ 209 (314)
T 2b2c_A 166 LFCGDGFEFLKN--HKNEFDVIITDSSDPV---GPAE------------------------SLFG-------QSYYELLR 209 (314)
T ss_dssp EECSCHHHHHHH--CTTCEEEEEECCC-----------------------------------------------HHHHHH
T ss_pred EEEChHHHHHHh--cCCCceEEEEcCCCCC---Ccch------------------------hhhH-------HHHHHHHH
Confidence 344433333222 5788999999765444 1210 0000 34777778
Q ss_pred hhcccCceEEEEe
Q 017439 216 QELVPGGLLLLLT 228 (371)
Q Consensus 216 ~EL~pGG~lvl~~ 228 (371)
+-|+|||+|++..
T Consensus 210 ~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 210 DALKEDGILSSQG 222 (314)
T ss_dssp HHEEEEEEEEEEC
T ss_pred hhcCCCeEEEEEC
Confidence 8999999999886
|
| >3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=96.43 E-value=0.00093 Score=60.65 Aligned_cols=103 Identities=15% Similarity=0.160 Sum_probs=59.0
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhh---hhcCCC--Ccceeee
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTL---FKSVPL--SKKYFAT 138 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~l---F~~l~~--~~~~f~~ 138 (371)
.-+|+|+|||+|..|+.+. + .+. | .-+|+..|.-..-.... ++...- .+--|..
T Consensus 57 ~~~vLdiG~G~G~~~~~la--------~-~~~---------~---~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~ 115 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYIL--------N-GLA---------D---NTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLL 115 (221)
T ss_dssp CCEEEEESTTHHHHHHHHH--------H-HSC---------T---TSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEEC
T ss_pred CCCEEEEcCCchHHHHHHH--------H-hCC---------C---CCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEE
Confidence 4589999999999999877 2 221 1 22577777655432222 222111 1223444
Q ss_pred ccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 139 GVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 139 gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
|....+..+ ++++++|++|+.... .++..||+.-.+-|
T Consensus 116 gda~~~l~~-~~~~~fD~V~~d~~~-----------------------------------------~~~~~~l~~~~~~L 153 (221)
T 3dr5_A 116 SRPLDVMSR-LANDSYQLVFGQVSP-----------------------------------------MDLKALVDAAWPLL 153 (221)
T ss_dssp SCHHHHGGG-SCTTCEEEEEECCCT-----------------------------------------TTHHHHHHHHHHHE
T ss_pred cCHHHHHHH-hcCCCcCeEEEcCcH-----------------------------------------HHHHHHHHHHHHHc
Confidence 432222222 246899999875311 12233566666889
Q ss_pred ccCceEEEEec
Q 017439 219 VPGGLLLLLTP 229 (371)
Q Consensus 219 ~pGG~lvl~~~ 229 (371)
+|||.+++...
T Consensus 154 kpGG~lv~dn~ 164 (221)
T 3dr5_A 154 RRGGALVLADA 164 (221)
T ss_dssp EEEEEEEETTT
T ss_pred CCCcEEEEeCC
Confidence 99999998543
|
| >2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A* | Back alignment and structure |
|---|
Probab=96.42 E-value=0.0038 Score=60.08 Aligned_cols=107 Identities=11% Similarity=0.041 Sum_probs=60.5
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC-------CCcce
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP-------LSKKY 135 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~-------~~~~~ 135 (371)
.+.+|+|+|||+|..+..+. + . .| ..+|...|+-..--...=+.++ ..+--
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~--------~--~---------~~---~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~ 173 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELC--------K--Y---------KS---VENIDICEIDETVIEVSKIYFKNISCGYEDKRVN 173 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHT--------T--C---------TT---CCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEE
T ss_pred CCCEEEEEcCCccHHHHHHH--------H--c---------CC---CCEEEEEECCHHHHHHHHHHHHhhccccCCCcEE
Confidence 35799999999999988776 2 1 11 2256666654322111111111 11222
Q ss_pred eeeccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhH-HHHHHHH
Q 017439 136 FATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDI-ESFLNAR 214 (371)
Q Consensus 136 f~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~-~~FL~~R 214 (371)
+..+....|-.. +++++|+|++...-+| -|.. .-+ ..|++.-
T Consensus 174 ~~~~D~~~~l~~--~~~~fDvIi~d~~~p~---~~~~--------------------------------~l~~~~~l~~~ 216 (321)
T 2pt6_A 174 VFIEDASKFLEN--VTNTYDVIIVDSSDPI---GPAE--------------------------------TLFNQNFYEKI 216 (321)
T ss_dssp EEESCHHHHHHH--CCSCEEEEEEECCCSS---SGGG--------------------------------GGSSHHHHHHH
T ss_pred EEEccHHHHHhh--cCCCceEEEECCcCCC---Ccch--------------------------------hhhHHHHHHHH
Confidence 444443222221 3678999999765444 1210 000 3467777
Q ss_pred HhhcccCceEEEEe
Q 017439 215 AQELVPGGLLLLLT 228 (371)
Q Consensus 215 a~EL~pGG~lvl~~ 228 (371)
.+-|+|||++++..
T Consensus 217 ~~~LkpgG~lv~~~ 230 (321)
T 2pt6_A 217 YNALKPNGYCVAQC 230 (321)
T ss_dssp HHHEEEEEEEEEEE
T ss_pred HHhcCCCcEEEEEc
Confidence 78999999999986
|
| >3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A* | Back alignment and structure |
|---|
Probab=96.40 E-value=0.00098 Score=63.02 Aligned_cols=120 Identities=15% Similarity=0.041 Sum_probs=64.9
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCc--hhhhhhcCCCCcceeeec
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNND--FNTLFKSVPLSKKYFATG 139 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~ND--Fn~lF~~l~~~~~~f~~g 139 (371)
+.+-+|+|+|||.|+.|+.++.. .| .-++...|.-..- |-.-+-....-..-|..+
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~-------------------~p---~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~ 188 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGL-------------------PA---ETVYIASDIDARLVGFVDEALTRLNVPHRTNVA 188 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTC-------------------CT---TCEEEEEESBHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCCceeeeeccCccHHHHHHHhh-------------------CC---CCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEe
Confidence 44779999999999999988731 12 2244444443211 111100000000111111
Q ss_pred cCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeec-------CCCHHHHHHHHHHHHhhH
Q 017439 140 VPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCS-------GFEKEVAEAYSAQFKNDI 207 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~-------~~~~~~~~ay~~Q~~~D~ 207 (371)
. +----|+...|++.++=++|-|.+-..+.-=..-.++|-+.|.++ +.++...+-|.++|+++.
T Consensus 189 D----~~~~~p~~~~DvaL~lkti~~Le~q~kg~g~~ll~aL~~~~vvVSfp~ksl~Grs~gm~~~Y~~~~e~~~ 259 (281)
T 3lcv_B 189 D----LLEDRLDEPADVTLLLKTLPCLETQQRGSGWEVIDIVNSPNIVVTFPTKSLGQRSKGMFQNYSQSFESQA 259 (281)
T ss_dssp C----TTTSCCCSCCSEEEETTCHHHHHHHSTTHHHHHHHHSSCSEEEEEEECC-------CHHHHHHHHHHHHH
T ss_pred e----ecccCCCCCcchHHHHHHHHHhhhhhhHHHHHHHHHhCCCCEEEeccchhhcCCCcchhhHHHHHHHHHH
Confidence 1 111127888999999999999965544321133346677778763 246666788887766654
|
| >2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A* | Back alignment and structure |
|---|
Probab=96.39 E-value=0.0022 Score=61.21 Aligned_cols=109 Identities=17% Similarity=0.066 Sum_probs=59.3
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC-------CCCcce
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV-------PLSKKY 135 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l-------~~~~~~ 135 (371)
.+.+|+|+|||+|..++.++ + . .| ..++...|+-..--...=+.+ ...+--
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~--------~--~---------~~---~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~ 152 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVV--------K--H---------PS---VESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLT 152 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHT--------T--C---------TT---CCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEE
T ss_pred CCCEEEEECCCchHHHHHHH--------H--c---------CC---CCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEE
Confidence 45799999999999998776 2 1 11 235666665432211111111 112223
Q ss_pred eeeccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHH
Q 017439 136 FATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARA 215 (371)
Q Consensus 136 f~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra 215 (371)
+..+....|-.. +++++|+|++....|| .|..- .....|++.-.
T Consensus 153 v~~~Da~~~l~~--~~~~fD~Ii~d~~~~~---~~~~~-------------------------------l~~~~~l~~~~ 196 (304)
T 2o07_A 153 LHVGDGFEFMKQ--NQDAFDVIITDSSDPM---GPAES-------------------------------LFKESYYQLMK 196 (304)
T ss_dssp EEESCHHHHHHT--CSSCEEEEEEECC---------------------------------------------CHHHHHHH
T ss_pred EEECcHHHHHhh--CCCCceEEEECCCCCC---Ccchh-------------------------------hhHHHHHHHHH
Confidence 444443333222 4688999999776665 12100 00123677777
Q ss_pred hhcccCceEEEEec
Q 017439 216 QELVPGGLLLLLTP 229 (371)
Q Consensus 216 ~EL~pGG~lvl~~~ 229 (371)
+-|+|||+|++...
T Consensus 197 ~~LkpgG~lv~~~~ 210 (304)
T 2o07_A 197 TALKEDGVLCCQGE 210 (304)
T ss_dssp HHEEEEEEEEEEEE
T ss_pred hccCCCeEEEEecC
Confidence 89999999998763
|
| >3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=96.32 E-value=0.027 Score=54.22 Aligned_cols=113 Identities=15% Similarity=0.060 Sum_probs=61.5
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC---Ccceeeec
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL---SKKYFATG 139 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~---~~~~f~~g 139 (371)
...+|+|+|||+|..++.+.... .| ...++..|.-..--...=+.+.. ..--|..+
T Consensus 203 ~~~~vLD~gcGsG~~~ie~a~~~------------------~~---~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~ 261 (354)
T 3tma_A 203 PGMRVLDPFTGSGTIALEAASTL------------------GP---TSPVYAGDLDEKRLGLAREAALASGLSWIRFLRA 261 (354)
T ss_dssp TTCCEEESSCTTSHHHHHHHHHH------------------CT---TSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEEC
T ss_pred CCCEEEeCCCCcCHHHHHHHHhh------------------CC---CceEEEEECCHHHHHHHHHHHHHcCCCceEEEeC
Confidence 34689999999999888776321 01 12345555433221111111100 01122322
Q ss_pred cCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcc
Q 017439 140 VPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELV 219 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 219 (371)
. +.+-..|.+++|+++++-..+|.... . .+...+...+++.-.+-|+
T Consensus 262 D---~~~~~~~~~~~D~Ii~npPyg~r~~~----------------------~--------~~~~~~~~~~~~~~~~~Lk 308 (354)
T 3tma_A 262 D---ARHLPRFFPEVDRILANPPHGLRLGR----------------------K--------EGLFHLYWDFLRGALALLP 308 (354)
T ss_dssp C---GGGGGGTCCCCSEEEECCCSCC--------------------------C--------HHHHHHHHHHHHHHHHTSC
T ss_pred C---hhhCccccCCCCEEEECCCCcCccCC----------------------c--------ccHHHHHHHHHHHHHHhcC
Confidence 2 22222345668999997665551110 0 1223444668888889999
Q ss_pred cCceEEEEec
Q 017439 220 PGGLLLLLTP 229 (371)
Q Consensus 220 pGG~lvl~~~ 229 (371)
|||++++...
T Consensus 309 pgG~l~i~t~ 318 (354)
T 3tma_A 309 PGGRVALLTL 318 (354)
T ss_dssp TTCEEEEEES
T ss_pred CCcEEEEEeC
Confidence 9999999875
|
| >2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=96.26 E-value=0.016 Score=58.08 Aligned_cols=127 Identities=16% Similarity=0.104 Sum_probs=68.5
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CCCcceeeecc
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PLSKKYFATGV 140 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~~~~~f~~gv 140 (371)
..+|+|+|||+|..|..+.. .+.. .-+|+.+|....--..+=+.+ ...+-.+..+.
T Consensus 260 g~~VLDlgaG~G~~t~~la~---------~~~~------------~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D 318 (450)
T 2yxl_A 260 GETVVDLAAAPGGKTTHLAE---------LMKN------------KGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKD 318 (450)
T ss_dssp TCEEEESSCTTCHHHHHHHH---------HTTT------------CSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSC
T ss_pred cCEEEEeCCCccHHHHHHHH---------HcCC------------CCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcC
Confidence 46899999999999998772 2110 125777776654433332222 11112233333
Q ss_pred CCCcccccCCCCceeEEEe---cCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 141 PGSFHGRLFPESSLHVAHT---SNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~S---s~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
...+- .-++++++|.|++ ++.+.-+.+.|+.... .++... ....+.-..+|+.-++-
T Consensus 319 ~~~~~-~~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~--------------~~~~~~-----~~l~~~q~~iL~~a~~~ 378 (450)
T 2yxl_A 319 ARKAP-EIIGEEVADKVLLDAPCTSSGTIGKNPELRWR--------------LREDKI-----NEMSQLQRELLESAARL 378 (450)
T ss_dssp TTCCS-SSSCSSCEEEEEEECCCCCGGGTTTSTTHHHH--------------CCTTSH-----HHHHHHHHHHHHHHHTT
T ss_pred hhhcc-hhhccCCCCEEEEcCCCCCCeeeccChhhhhh--------------CCHHHH-----HHHHHHHHHHHHHHHHh
Confidence 22221 1155688999996 3344444444542111 000000 01111224578888889
Q ss_pred cccCceEEEEecCc
Q 017439 218 LVPGGLLLLLTPTI 231 (371)
Q Consensus 218 L~pGG~lvl~~~gr 231 (371)
|+|||+|+...+..
T Consensus 379 LkpGG~lvy~tcs~ 392 (450)
T 2yxl_A 379 VKPGGRLLYTTCSI 392 (450)
T ss_dssp EEEEEEEEEEESCC
T ss_pred cCCCcEEEEEeCCC
Confidence 99999999888654
|
| >3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A | Back alignment and structure |
|---|
Probab=96.24 E-value=0.0066 Score=56.62 Aligned_cols=126 Identities=12% Similarity=0.010 Sum_probs=64.2
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC---CCcceeeec
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP---LSKKYFATG 139 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~---~~~~~f~~g 139 (371)
...+|+|+|||+|..|..+.+ .... .-+|+..|.-..--..+=+.+. -.+-.+..+
T Consensus 83 ~g~~VLDlgaG~G~~t~~la~---------~~~~------------~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~ 141 (274)
T 3ajd_A 83 EDDFILDMCAAPGGKTTHLAQ---------LMKN------------KGTIVAVEISKTRTKALKSNINRMGVLNTIIINA 141 (274)
T ss_dssp TTCEEEETTCTTCHHHHHHHH---------HTTT------------CSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES
T ss_pred CcCEEEEeCCCccHHHHHHHH---------HcCC------------CCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeC
Confidence 346999999999999988762 1110 1256666665443332222211 111123333
Q ss_pred cCCCccccc-CCCCceeEEEecC---CccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHH
Q 017439 140 VPGSFHGRL-FPESSLHVAHTSN---ALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARA 215 (371)
Q Consensus 140 vpgSFy~rL-fP~~Svd~~~Ss~---alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra 215 (371)
....+-..+ .+.+++|+|++.. .+..+.+.|. |+ ..-.....++...+|+.-.
T Consensus 142 D~~~~~~~~~~~~~~fD~Vl~d~Pcs~~g~~~~~p~---------~~--------------~~~~~~~~~~~~~~l~~~~ 198 (274)
T 3ajd_A 142 DMRKYKDYLLKNEIFFDKILLDAPCSGNIIKDKNRN---------VS--------------EEDIKYCSLRQKELIDIGI 198 (274)
T ss_dssp CHHHHHHHHHHTTCCEEEEEEEECCC-----------------------------------HHHHTGGGTCHHHHHHHHH
T ss_pred ChHhcchhhhhccccCCEEEEcCCCCCCcccccCCC---------CC--------------HHHHHHHHHHHHHHHHHHH
Confidence 211111000 0256899998752 2223332220 01 0111223456677899888
Q ss_pred hhcccCceEEEEecCcC
Q 017439 216 QELVPGGLLLLLTPTIR 232 (371)
Q Consensus 216 ~EL~pGG~lvl~~~gr~ 232 (371)
+-|+|||+|++..+...
T Consensus 199 ~~LkpgG~lv~stcs~~ 215 (274)
T 3ajd_A 199 DLLKKDGELVYSTCSME 215 (274)
T ss_dssp HHEEEEEEEEEEESCCC
T ss_pred HhCCCCCEEEEEECCCC
Confidence 99999999999886553
|
| >3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A* | Back alignment and structure |
|---|
Probab=96.23 E-value=0.0015 Score=60.97 Aligned_cols=107 Identities=17% Similarity=0.230 Sum_probs=64.0
Q ss_pred CCceEEeeecCCCCcccHHHHH-----------HHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQ-----------NIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP 130 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~-----------~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~ 130 (371)
..+-+|+|+|||.|+.++..+. ..|+.+++ ..... .+ ++.+...|++...
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~~~~~y~a~DId~~~i~~ar~-~~~~~------g~---~~~~~v~D~~~~~--------- 164 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYERGIASVWGCDIHQGLGDVITP-FAREK------DW---DFTFALQDVLCAP--------- 164 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHTTCSEEEEEESBHHHHHHHHH-HHHHT------TC---EEEEEECCTTTSC---------
T ss_pred CCCCeEEEecCCccHHHHHhccCCeEEEEeCCHHHHHHHHH-HHHhc------CC---CceEEEeecccCC---------
Confidence 3467999999999999998762 45555555 33221 12 4566666766554
Q ss_pred CCcceeeeccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeec-------CCCHHHHHHHHHHH
Q 017439 131 LSKKYFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCS-------GFEKEVAEAYSAQF 203 (371)
Q Consensus 131 ~~~~~f~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~-------~~~~~~~~ay~~Q~ 203 (371)
|+.+.|++.++=++|-|.+.........-.++|.+.|.++ +.++...+.|..+|
T Consensus 165 -------------------~~~~~DvvLllk~lh~LE~q~~~~~~~ll~aL~~~~vvVsfPtksl~Gr~~gm~~~Y~~~~ 225 (253)
T 3frh_A 165 -------------------PAEAGDLALIFKLLPLLEREQAGSAMALLQSLNTPRMAVSFPTRSLGGRGKGMEANYAAWF 225 (253)
T ss_dssp -------------------CCCBCSEEEEESCHHHHHHHSTTHHHHHHHHCBCSEEEEEEECC-----------CHHHHH
T ss_pred -------------------CCCCcchHHHHHHHHHhhhhchhhHHHHHHHhcCCCEEEEcChHHhcCCCcchhhHHHHHH
Confidence 6668999999999999976555432222235566666652 23444556666554
Q ss_pred Hhh
Q 017439 204 KND 206 (371)
Q Consensus 204 ~~D 206 (371)
+++
T Consensus 226 e~~ 228 (253)
T 3frh_A 226 EGG 228 (253)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
|
| >2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli} | Back alignment and structure |
|---|
Probab=96.16 E-value=0.025 Score=57.41 Aligned_cols=127 Identities=16% Similarity=0.213 Sum_probs=72.5
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC---CCcceeeec
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP---LSKKYFATG 139 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~---~~~~~f~~g 139 (371)
...+|+|+|||+|.-|+.+. + ... + .-+|+.+|.-..-...+=+.+. -.+-.+..+
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA--------~-~~~---------~---~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~ 175 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQIS--------A-RMN---------N---EGAILANEFSASRVKVLHANISRCGISNVALTHF 175 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHH--------H-HTT---------T---CSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECC
T ss_pred CCCEEEEeCCCCCHHHHHHH--------H-hCC---------C---CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeC
Confidence 34699999999999999877 2 211 1 1257777776655444433321 112224444
Q ss_pred cCCCcccccCCCCceeEEEe---cCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHh
Q 017439 140 VPGSFHGRLFPESSLHVAHT---SNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQ 216 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~S---s~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~ 216 (371)
....+-. .+++++|.|++ ++...-+.+.|..... -+++.... ..+.-..+|+.=++
T Consensus 176 D~~~~~~--~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~---------------~~~~~~~~----l~~~q~~iL~~a~~ 234 (479)
T 2frx_A 176 DGRVFGA--AVPEMFDAILLDAPCSGEGVVRKDPDALKN---------------WSPESNQE----IAATQRELIDSAFH 234 (479)
T ss_dssp CSTTHHH--HSTTCEEEEEEECCCCCGGGGGTCTTSSSS---------------CCHHHHHH----HHHHHHHHHHHHHH
T ss_pred CHHHhhh--hccccCCEEEECCCcCCcccccCCHHHHhh---------------cCHhHHHH----HHHHHHHHHHHHHH
Confidence 4333211 13578999998 3444444555542211 11222221 22233457888888
Q ss_pred hcccCceEEEEecCc
Q 017439 217 ELVPGGLLLLLTPTI 231 (371)
Q Consensus 217 EL~pGG~lvl~~~gr 231 (371)
-|+|||+||..++..
T Consensus 235 ~LkpGG~LvysTcs~ 249 (479)
T 2frx_A 235 ALRPGGTLVYSTCTL 249 (479)
T ss_dssp HEEEEEEEEEEESCC
T ss_pred hcCCCCEEEEecccC
Confidence 999999999988654
|
| >3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=96.16 E-value=0.006 Score=62.02 Aligned_cols=20 Identities=30% Similarity=0.589 Sum_probs=16.3
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~ 82 (371)
+..+|+|+|||+|..++.+.
T Consensus 158 ~~~~VLDiGcGtG~la~~la 177 (480)
T 3b3j_A 158 KDKIVLDVGCGSGILSFFAA 177 (480)
T ss_dssp TTCEEEEESCSTTHHHHHHH
T ss_pred CCCEEEEecCcccHHHHHHH
Confidence 34699999999999777554
|
| >2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=96.14 E-value=0.023 Score=51.07 Aligned_cols=20 Identities=10% Similarity=0.248 Sum_probs=17.3
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~ 82 (371)
...+|+|+|||+|..++.+.
T Consensus 91 ~~~~vldiG~G~G~~~~~l~ 110 (248)
T 2yvl_A 91 KEKRVLEFGTGSGALLAVLS 110 (248)
T ss_dssp TTCEEEEECCTTSHHHHHHH
T ss_pred CCCEEEEeCCCccHHHHHHH
Confidence 34699999999999998877
|
| >3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A* | Back alignment and structure |
|---|
Probab=96.13 E-value=0.0021 Score=57.36 Aligned_cols=20 Identities=20% Similarity=0.235 Sum_probs=17.6
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~ 82 (371)
+..+|+|+|||+|..|+.+.
T Consensus 58 ~~~~vLdiG~G~G~~~~~la 77 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLA 77 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHH
T ss_pred CCCEEEEecCCccHHHHHHH
Confidence 35799999999999999877
|
| >3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0 | Back alignment and structure |
|---|
Probab=96.13 E-value=0.0035 Score=55.80 Aligned_cols=19 Identities=26% Similarity=0.301 Sum_probs=17.0
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~ 82 (371)
..+|+|+|||+|..|+.+.
T Consensus 65 ~~~vLdiG~G~G~~~~~la 83 (225)
T 3tr6_A 65 AKKVIDIGTFTGYSAIAMG 83 (225)
T ss_dssp CSEEEEECCTTSHHHHHHH
T ss_pred CCEEEEeCCcchHHHHHHH
Confidence 4599999999999999877
|
| >1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A | Back alignment and structure |
|---|
Probab=96.06 E-value=0.011 Score=58.97 Aligned_cols=126 Identities=17% Similarity=0.148 Sum_probs=73.5
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC--CcceeeeccC
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL--SKKYFATGVP 141 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~--~~~~f~~gvp 141 (371)
..+|+|+|||+|..|..+. + .. | .-+|+.+|.-..-...+-+.+.. ....+..+..
T Consensus 247 g~~VLDlgaG~G~~t~~la--------~-~~----------~---~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~ 304 (429)
T 1sqg_A 247 GEHILDLCAAPGGKTTHIL--------E-VA----------P---EAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDG 304 (429)
T ss_dssp TCEEEEESCTTCHHHHHHH--------H-HC----------T---TCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCT
T ss_pred cCeEEEECCCchHHHHHHH--------H-Hc----------C---CCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCch
Confidence 4699999999999999877 2 11 1 23677888766654444333311 1123334432
Q ss_pred CCcccccCCCCceeEEEe---cCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 142 GSFHGRLFPESSLHVAHT---SNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 142 gSFy~rLfP~~Svd~~~S---s~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
..+ ...++++++|.|++ ++.+..+.+.|..... .++..+ ....+....+|+.=.+-|
T Consensus 305 ~~~-~~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~--------------~~~~~~-----~~l~~~q~~~L~~a~~~L 364 (429)
T 1sqg_A 305 RYP-SQWCGEQQFDRILLDAPCSATGVIRRHPDIKWL--------------RRDRDI-----PELAQLQSEILDAIWPHL 364 (429)
T ss_dssp TCT-HHHHTTCCEEEEEEECCCCCGGGTTTCTTHHHH--------------CCTTHH-----HHHHHHHHHHHHHHGGGE
T ss_pred hhc-hhhcccCCCCEEEEeCCCCcccccCCCcchhhc--------------CCHHHH-----HHHHHHHHHHHHHHHHhc
Confidence 222 11246689999997 4455555555542211 011111 112233356788888999
Q ss_pred ccCceEEEEecCc
Q 017439 219 VPGGLLLLLTPTI 231 (371)
Q Consensus 219 ~pGG~lvl~~~gr 231 (371)
+|||+|++..+..
T Consensus 365 kpGG~lvystcs~ 377 (429)
T 1sqg_A 365 KTGGTLVYATCSV 377 (429)
T ss_dssp EEEEEEEEEESCC
T ss_pred CCCCEEEEEECCC
Confidence 9999999988654
|
| >3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=96.00 E-value=0.0031 Score=57.90 Aligned_cols=105 Identities=15% Similarity=0.148 Sum_probs=59.5
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCch---hhhhhcCCCC-cceeeec
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDF---NTLFKSVPLS-KKYFATG 139 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDF---n~lF~~l~~~-~~~f~~g 139 (371)
+-+|+|+|||+|..|+.+. + .+. + .-+|+..|.-..-. ...++...-. +--|..|
T Consensus 61 ~~~VLDiG~G~G~~t~~la--------~-~~~---------~---~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~g 119 (242)
T 3r3h_A 61 AKKVLELGTFTGYSALAMS--------L-ALP---------D---DGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLG 119 (242)
T ss_dssp CSEEEEEESCCSHHHHHHH--------H-TSC---------T---TCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEES
T ss_pred cCEEEEeeCCcCHHHHHHH--------H-hCC---------C---CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc
Confidence 4699999999999999877 3 221 1 22566666654321 1122222211 2234444
Q ss_pred cCCCcccccCC---CCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHh
Q 017439 140 VPGSFHGRLFP---ESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQ 216 (371)
Q Consensus 140 vpgSFy~rLfP---~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~ 216 (371)
....+...+.. ++++|++++... + .+...+|+.-.+
T Consensus 120 da~~~l~~~~~~~~~~~fD~V~~d~~-------~----------------------------------~~~~~~l~~~~~ 158 (242)
T 3r3h_A 120 PALDTLHSLLNEGGEHQFDFIFIDAD-------K----------------------------------TNYLNYYELALK 158 (242)
T ss_dssp CHHHHHHHHHHHHCSSCEEEEEEESC-------G----------------------------------GGHHHHHHHHHH
T ss_pred CHHHHHHHHhhccCCCCEeEEEEcCC-------h----------------------------------HHhHHHHHHHHH
Confidence 42221112211 588999987532 0 223336666678
Q ss_pred hcccCceEEEEecC
Q 017439 217 ELVPGGLLLLLTPT 230 (371)
Q Consensus 217 EL~pGG~lvl~~~g 230 (371)
-|+|||.+++...-
T Consensus 159 ~LkpGG~lv~d~~~ 172 (242)
T 3r3h_A 159 LVTPKGLIAIDNIF 172 (242)
T ss_dssp HEEEEEEEEEECSS
T ss_pred hcCCCeEEEEECCc
Confidence 99999999996643
|
| >1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A* | Back alignment and structure |
|---|
Probab=95.92 E-value=0.016 Score=54.46 Aligned_cols=19 Identities=21% Similarity=0.316 Sum_probs=16.8
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~ 82 (371)
..+|+|+|||+|..++.+.
T Consensus 124 ~~~vLDlG~GsG~~~~~la 142 (284)
T 1nv8_A 124 IKTVADIGTGSGAIGVSVA 142 (284)
T ss_dssp CCEEEEESCTTSHHHHHHH
T ss_pred CCEEEEEeCchhHHHHHHH
Confidence 3589999999999998877
|
| >3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae} | Back alignment and structure |
|---|
Probab=95.89 E-value=0.11 Score=47.77 Aligned_cols=19 Identities=11% Similarity=0.219 Sum_probs=17.4
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~ 82 (371)
.-+|+|+|||||..++.+.
T Consensus 22 g~~VlDIGtGsG~l~i~la 40 (230)
T 3lec_A 22 GARLLDVGSDHAYLPIFLL 40 (230)
T ss_dssp TEEEEEETCSTTHHHHHHH
T ss_pred CCEEEEECCchHHHHHHHH
Confidence 4799999999999999887
|
| >2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51 | Back alignment and structure |
|---|
Probab=95.87 E-value=0.058 Score=51.97 Aligned_cols=28 Identities=25% Similarity=0.254 Sum_probs=22.5
Q ss_pred HhhHHHHHHHHHhhcccCceEEEEecCc
Q 017439 204 KNDIESFLNARAQELVPGGLLLLLTPTI 231 (371)
Q Consensus 204 ~~D~~~FL~~Ra~EL~pGG~lvl~~~gr 231 (371)
.+|+..+|+.-.+-|+|||.++++....
T Consensus 248 ~~~~~~ll~~~~~~LkpgG~lli~~~~~ 275 (332)
T 2igt_A 248 FDHLPLMLDICREILSPKALGLVLTAYS 275 (332)
T ss_dssp HHHHHHHHHHHHHTBCTTCCEEEEEECC
T ss_pred HHHHHHHHHHHHHhcCcCcEEEEEECCC
Confidence 3567778888889999999988877554
|
| >3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=95.81 E-value=0.025 Score=52.70 Aligned_cols=102 Identities=10% Similarity=0.034 Sum_probs=59.5
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CCCcceeeecc
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PLSKKYFATGV 140 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~~~~~f~~gv 140 (371)
.-+|+|+|||+|..|+.+. . ++. .-+|+..|+-..-...+=+.+ .-.+-.|..|.
T Consensus 120 ~~~VLDlgcG~G~~s~~la--------~-~~~-------------~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d 177 (272)
T 3a27_A 120 NEVVVDMFAGIGYFTIPLA--------K-YSK-------------PKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILAD 177 (272)
T ss_dssp TCEEEETTCTTTTTHHHHH--------H-HTC-------------CSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESC
T ss_pred CCEEEEecCcCCHHHHHHH--------H-hCC-------------CCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECC
Confidence 4689999999999999887 2 211 125667676433222221111 11122455555
Q ss_pred CCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc
Q 017439 141 PGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP 220 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 220 (371)
...+ .. .+++|++++.... . ...+|..-.+-|+|
T Consensus 178 ~~~~-~~---~~~~D~Vi~d~p~--------~----------------------------------~~~~l~~~~~~Lkp 211 (272)
T 3a27_A 178 NRDV-EL---KDVADRVIMGYVH--------K----------------------------------THKFLDKTFEFLKD 211 (272)
T ss_dssp GGGC-CC---TTCEEEEEECCCS--------S----------------------------------GGGGHHHHHHHEEE
T ss_pred hHHc-Cc---cCCceEEEECCcc--------c----------------------------------HHHHHHHHHHHcCC
Confidence 4333 11 5689999876322 1 11145555678999
Q ss_pred CceEEEEecCcCC
Q 017439 221 GGLLLLLTPTIRD 233 (371)
Q Consensus 221 GG~lvl~~~gr~~ 233 (371)
||++++......+
T Consensus 212 gG~l~~s~~~~~~ 224 (272)
T 3a27_A 212 RGVIHYHETVAEK 224 (272)
T ss_dssp EEEEEEEEEEEGG
T ss_pred CCEEEEEEcCccc
Confidence 9999988866543
|
| >1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A* | Back alignment and structure |
|---|
Probab=95.78 E-value=0.052 Score=53.02 Aligned_cols=29 Identities=14% Similarity=0.078 Sum_probs=24.1
Q ss_pred HHHhhHHHHHHHHHhhcccCceEEEEecC
Q 017439 202 QFKNDIESFLNARAQELVPGGLLLLLTPT 230 (371)
Q Consensus 202 Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~g 230 (371)
...+++..+|..-.+-|+|||.+++....
T Consensus 299 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 327 (382)
T 1wxx_A 299 RAYRAYKEVNLRAIKLLKEGGILATASCS 327 (382)
T ss_dssp HHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 34567788999999999999999988754
|
| >3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A* | Back alignment and structure |
|---|
Probab=95.65 E-value=0.01 Score=60.14 Aligned_cols=127 Identities=14% Similarity=0.128 Sum_probs=70.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC--Ccceeeecc
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL--SKKYFATGV 140 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~--~~~~f~~gv 140 (371)
...+|+|+|||+|..|+.+. . .... .-+|+.+|+-..--..+=+.+.. -.-.+..+.
T Consensus 101 ~g~~VLDlgaGpG~kt~~LA--------~-~~~~------------~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~D 159 (464)
T 3m6w_A 101 PGERVLDLAAAPGGKTTHLA--------A-RMGG------------KGLLLANEVDGKRVRGLLENVERWGAPLAVTQAP 159 (464)
T ss_dssp TTCEEEESSCTTCHHHHHHH--------H-HTTT------------CSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSC
T ss_pred CCCEEEEEcCCcCHHHHHHH--------H-hCCC------------CCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECC
Confidence 35799999999999999887 2 2211 12577888766554444333211 012233443
Q ss_pred CCCcccccCCCCceeEEEe---cCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 141 PGSFHGRLFPESSLHVAHT---SNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~S---s~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
+..+-. ++++++|.|++ ++..--+.+.|..... .++ +..+ ...+.-..+|+.=.+-
T Consensus 160 a~~l~~--~~~~~FD~Il~D~PcSg~G~~rr~pd~~~~--------------~~~-~~~~----~l~~~Q~~iL~~a~~~ 218 (464)
T 3m6w_A 160 PRALAE--AFGTYFHRVLLDAPCSGEGMFRKDREAARH--------------WGP-SAPK----RMAEVQKALLAQASRL 218 (464)
T ss_dssp HHHHHH--HHCSCEEEEEEECCCCCGGGTTTCTTSGGG--------------CCT-THHH----HHHHHHHHHHHHHHTT
T ss_pred HHHhhh--hccccCCEEEECCCcCCccccccChHHhhh--------------cCH-HHHH----HHHHHHHHHHHHHHHh
Confidence 222211 13678999986 2233333444442211 011 1111 1223335678888899
Q ss_pred cccCceEEEEecCc
Q 017439 218 LVPGGLLLLLTPTI 231 (371)
Q Consensus 218 L~pGG~lvl~~~gr 231 (371)
|+|||+||..++..
T Consensus 219 LkpGG~LvysTCs~ 232 (464)
T 3m6w_A 219 LGPGGVLVYSTCTF 232 (464)
T ss_dssp EEEEEEEEEEESCC
T ss_pred cCCCcEEEEEeccC
Confidence 99999999987654
|
| >2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45 | Back alignment and structure |
|---|
Probab=95.41 E-value=0.042 Score=52.73 Aligned_cols=127 Identities=16% Similarity=0.152 Sum_probs=68.1
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC--CCcceeeec
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP--LSKKYFATG 139 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~--~~~~~f~~g 139 (371)
....+|+|.|||+|..++.+.+. +.. .. .+ ..+++..|+-..-....-..+. ....-+..|
T Consensus 129 ~~~~~VlDp~cGsG~~l~~~~~~----~~~-~~---------~~---~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~ 191 (344)
T 2f8l_A 129 KKNVSILDPACGTANLLTTVINQ----LEL-KG---------DV---DVHASGVDVDDLLISLALVGADLQRQKMTLLHQ 191 (344)
T ss_dssp CSEEEEEETTCTTSHHHHHHHHH----HHT-TS---------SC---EEEEEEEESCHHHHHHHHHHHHHHTCCCEEEES
T ss_pred CCCCEEEeCCCCccHHHHHHHHH----HHH-hc---------CC---CceEEEEECCHHHHHHHHHHHHhCCCCceEEEC
Confidence 35689999999999988877632 222 10 01 3567777764433221111110 001122222
Q ss_pred cCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHH-HHHHHHHhhc
Q 017439 140 VPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIE-SFLNARAQEL 218 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~-~FL~~Ra~EL 218 (371)
. +.. ..+..++|+++++--++|.... .....-.+...+|. .|.. .|+..-.+-|
T Consensus 192 D---~l~-~~~~~~fD~Ii~NPPfg~~~~~--~~~~~~~~~~~~g~-------------------~~~~~~~l~~~~~~L 246 (344)
T 2f8l_A 192 D---GLA-NLLVDPVDVVISDLPVGYYPDD--ENAKTFELCREEGH-------------------SFAHFLFIEQGMRYT 246 (344)
T ss_dssp C---TTS-CCCCCCEEEEEEECCCSEESCH--HHHTTSTTCCSSSC-------------------EEHHHHHHHHHHHTE
T ss_pred C---CCC-ccccCCccEEEECCCCCCcCch--hhhhhccccCCCCc-------------------chHHHHHHHHHHHHh
Confidence 2 222 2356789999999888774321 11110001001111 1222 4788778899
Q ss_pred ccCceEEEEecC
Q 017439 219 VPGGLLLLLTPT 230 (371)
Q Consensus 219 ~pGG~lvl~~~g 230 (371)
+|||+++++++.
T Consensus 247 k~gG~~~~v~p~ 258 (344)
T 2f8l_A 247 KPGGYLFFLVPD 258 (344)
T ss_dssp EEEEEEEEEEEG
T ss_pred CCCCEEEEEECc
Confidence 999999999854
|
| >1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A* | Back alignment and structure |
|---|
Probab=95.35 E-value=0.0053 Score=56.49 Aligned_cols=20 Identities=15% Similarity=0.245 Sum_probs=17.6
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~ 82 (371)
++-+|+|+|||+|..|+.+.
T Consensus 79 ~~~~VLeiG~G~G~~~~~la 98 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATA 98 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHH
T ss_pred CcCEEEEeCCCcCHHHHHHH
Confidence 35699999999999999877
|
| >2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1 | Back alignment and structure |
|---|
Probab=95.33 E-value=0.0087 Score=53.35 Aligned_cols=20 Identities=30% Similarity=0.293 Sum_probs=17.3
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~ 82 (371)
+..+|+|+|||+|..|+.+.
T Consensus 69 ~~~~vLdiG~G~G~~~~~la 88 (229)
T 2avd_A 69 QAKKALDLGTFTGYSALALA 88 (229)
T ss_dssp TCCEEEEECCTTSHHHHHHH
T ss_pred CCCEEEEEcCCccHHHHHHH
Confidence 34699999999999998877
|
| >3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium} | Back alignment and structure |
|---|
Probab=95.13 E-value=0.026 Score=57.07 Aligned_cols=127 Identities=15% Similarity=0.103 Sum_probs=69.4
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC---CCcceeeec
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP---LSKKYFATG 139 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~---~~~~~f~~g 139 (371)
...+|+|+|||+|.-|+.+. . .... .-+|+.+|.-..--..+=+.+. -.+-.+..+
T Consensus 105 ~g~~VLDlcaGpGgkt~~lA--------~-~~~~------------~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~ 163 (456)
T 3m4x_A 105 PGEKVLDLCAAPGGKSTQLA--------A-QMKG------------KGLLVTNEIFPKRAKILSENIERWGVSNAIVTNH 163 (456)
T ss_dssp TTCEEEESSCTTCHHHHHHH--------H-HHTT------------CSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECC
T ss_pred CCCEEEEECCCcCHHHHHHH--------H-HcCC------------CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeC
Confidence 34799999999999999877 2 2211 1257788876654443333321 112234444
Q ss_pred cCCCcccccCCCCceeEEEecC---CccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHh
Q 017439 140 VPGSFHGRLFPESSLHVAHTSN---ALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQ 216 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~---alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~ 216 (371)
.+..+-. .+++++|.|++.. .+.-+.+.|..... .+. + ......+.-..+|+.=.+
T Consensus 164 Da~~l~~--~~~~~FD~Il~DaPCSg~G~~rr~p~~~~~--------------~~~-~----~~~~l~~~Q~~iL~~a~~ 222 (456)
T 3m4x_A 164 APAELVP--HFSGFFDRIVVDAPCSGEGMFRKDPNAIKE--------------WTE-E----SPLYCQKRQQEILSSAIK 222 (456)
T ss_dssp CHHHHHH--HHTTCEEEEEEECCCCCGGGTTTCHHHHHH--------------CCT-T----HHHHHHHHHHHHHHHHHH
T ss_pred CHHHhhh--hccccCCEEEECCCCCCccccccCHHHhhh--------------cCH-H----HHHHHHHHHHHHHHHHHH
Confidence 4333211 1357899998732 22222222321110 001 1 112223334568888889
Q ss_pred hcccCceEEEEecCc
Q 017439 217 ELVPGGLLLLLTPTI 231 (371)
Q Consensus 217 EL~pGG~lvl~~~gr 231 (371)
-|+|||+||..++..
T Consensus 223 ~LkpGG~LvYsTCs~ 237 (456)
T 3m4x_A 223 MLKNKGQLIYSTCTF 237 (456)
T ss_dssp TEEEEEEEEEEESCC
T ss_pred hcCCCcEEEEEEeec
Confidence 999999999887654
|
| >3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum} | Back alignment and structure |
|---|
Probab=95.13 E-value=0.0069 Score=55.20 Aligned_cols=20 Identities=20% Similarity=0.311 Sum_probs=17.7
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~ 82 (371)
++-+|+|+|||+|..|+.+.
T Consensus 70 ~~~~VLeiG~G~G~~~~~la 89 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTA 89 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHH
T ss_pred CCCEEEEeCCCCCHHHHHHH
Confidence 35699999999999999887
|
| >3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP} | Back alignment and structure |
|---|
Probab=95.10 E-value=0.016 Score=52.40 Aligned_cols=19 Identities=11% Similarity=0.258 Sum_probs=16.9
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~ 82 (371)
..+|+|+|||+|..|+.+.
T Consensus 73 ~~~vLdiG~G~G~~~~~la 91 (232)
T 3cbg_A 73 AKQVLEIGVFRGYSALAMA 91 (232)
T ss_dssp CCEEEEECCTTSHHHHHHH
T ss_pred CCEEEEecCCCCHHHHHHH
Confidence 4599999999999998877
|
| >1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32 | Back alignment and structure |
|---|
Probab=94.69 E-value=0.044 Score=47.75 Aligned_cols=75 Identities=12% Similarity=0.005 Sum_probs=40.9
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPG 142 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpg 142 (371)
...+|+|+|||+|..++.+. . . + .-+|+..|+-..--...=+.++ +--|..+.
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~--------~-~-----------~---~~~v~~vD~~~~~~~~a~~~~~--~~~~~~~d-- 103 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSY--------L-L-----------G---AESVTAFDIDPDAIETAKRNCG--GVNFMVAD-- 103 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHH--------H-T-----------T---BSEEEEEESCHHHHHHHHHHCT--TSEEEECC--
T ss_pred CCCEEEEEeCCccHHHHHHH--------H-c-----------C---CCEEEEEECCHHHHHHHHHhcC--CCEEEECc--
Confidence 45699999999999888765 2 1 0 1146666654332222212222 22233333
Q ss_pred CcccccCCCCceeEEEecCCccccCC
Q 017439 143 SFHGRLFPESSLHVAHTSNALPWLSK 168 (371)
Q Consensus 143 SFy~rLfP~~Svd~~~Ss~alHWLS~ 168 (371)
+.. +| +++|+++++-.+||+++
T Consensus 104 -~~~--~~-~~~D~v~~~~p~~~~~~ 125 (200)
T 1ne2_A 104 -VSE--IS-GKYDTWIMNPPFGSVVK 125 (200)
T ss_dssp -GGG--CC-CCEEEEEECCCC-----
T ss_pred -HHH--CC-CCeeEEEECCCchhccC
Confidence 222 24 78999999999999654
|
| >3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca} | Back alignment and structure |
|---|
Probab=94.68 E-value=0.011 Score=52.08 Aligned_cols=19 Identities=11% Similarity=-0.008 Sum_probs=16.9
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~ 82 (371)
..+|+|+|||+|..|+.+.
T Consensus 57 ~~~vLdiG~G~G~~~~~la 75 (210)
T 3c3p_A 57 PQLVVVPGDGLGCASWWFA 75 (210)
T ss_dssp CSEEEEESCGGGHHHHHHH
T ss_pred CCEEEEEcCCccHHHHHHH
Confidence 4689999999999998876
|
| >3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str} | Back alignment and structure |
|---|
Probab=94.62 E-value=0.12 Score=47.94 Aligned_cols=19 Identities=26% Similarity=0.331 Sum_probs=17.4
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~ 82 (371)
.-+|+|+|||+|..++.+.
T Consensus 22 g~~VlDIGtGsG~l~i~la 40 (244)
T 3gnl_A 22 NERIADIGSDHAYLPCFAV 40 (244)
T ss_dssp SEEEEEETCSTTHHHHHHH
T ss_pred CCEEEEECCccHHHHHHHH
Confidence 4799999999999999887
|
| >4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=94.51 E-value=0.078 Score=52.39 Aligned_cols=29 Identities=17% Similarity=0.280 Sum_probs=23.5
Q ss_pred HHHhhHHHHHHHHHhhcccCceEEEEecC
Q 017439 202 QFKNDIESFLNARAQELVPGGLLLLLTPT 230 (371)
Q Consensus 202 Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~g 230 (371)
...+|+..+++.-.+-|+|||+|++..+.
T Consensus 300 ~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s 328 (393)
T 4dmg_A 300 AMKRHLVDLVREALRLLAEEGFLWLSSCS 328 (393)
T ss_dssp HHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 44567788999999999999999966644
|
| >2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A | Back alignment and structure |
|---|
Probab=94.30 E-value=0.066 Score=49.83 Aligned_cols=19 Identities=11% Similarity=0.258 Sum_probs=16.5
Q ss_pred HHHHHHhhcccCceEEEEe
Q 017439 210 FLNARAQELVPGGLLLLLT 228 (371)
Q Consensus 210 FL~~Ra~EL~pGG~lvl~~ 228 (371)
|++.-.+-|+|||+|++..
T Consensus 153 ~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 153 RIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp HHHHHHTTEEEEEEEEEEE
T ss_pred HHHHHHHhcCCCcEEEEEc
Confidence 7778888999999999864
|
| >3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A* | Back alignment and structure |
|---|
Probab=94.27 E-value=0.089 Score=50.01 Aligned_cols=21 Identities=14% Similarity=0.056 Sum_probs=18.4
Q ss_pred CceEEeeecCCCCcccHHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAMQ 83 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~ 83 (371)
..-+|+|+|||+|..|..+..
T Consensus 50 ~~~~VLEIG~G~G~lT~~La~ 70 (295)
T 3gru_A 50 KDDVVLEIGLGKGILTEELAK 70 (295)
T ss_dssp TTCEEEEECCTTSHHHHHHHH
T ss_pred CcCEEEEECCCchHHHHHHHh
Confidence 346899999999999999885
|
| >1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24 | Back alignment and structure |
|---|
Probab=94.20 E-value=0.2 Score=46.90 Aligned_cols=21 Identities=24% Similarity=0.268 Sum_probs=18.2
Q ss_pred CceEEeeecCCCCcccHHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAMQ 83 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~ 83 (371)
..-+|+|+|||+|..|..+..
T Consensus 28 ~~~~VLDiG~G~G~lt~~L~~ 48 (285)
T 1zq9_A 28 PTDVVLEVGPGTGNMTVKLLE 48 (285)
T ss_dssp TTCEEEEECCTTSTTHHHHHH
T ss_pred CCCEEEEEcCcccHHHHHHHh
Confidence 346899999999999998874
|
| >2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51 | Back alignment and structure |
|---|
Probab=93.83 E-value=0.15 Score=49.92 Aligned_cols=30 Identities=13% Similarity=-0.027 Sum_probs=24.4
Q ss_pred HHHhhHHHHHHHHHhhcccCceEEEEecCc
Q 017439 202 QFKNDIESFLNARAQELVPGGLLLLLTPTI 231 (371)
Q Consensus 202 Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~gr 231 (371)
...+++..+|..-.+-|+|||.|++.....
T Consensus 309 ~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 309 AGLRAYFNVNFAGLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp HHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEECCC
Confidence 345778889999999999999998887543
|
| >2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A* | Back alignment and structure |
|---|
Probab=93.61 E-value=0.14 Score=50.28 Aligned_cols=27 Identities=19% Similarity=0.311 Sum_probs=21.9
Q ss_pred HhhHHHHHHHHHhhcccCceEEEEecC
Q 017439 204 KNDIESFLNARAQELVPGGLLLLLTPT 230 (371)
Q Consensus 204 ~~D~~~FL~~Ra~EL~pGG~lvl~~~g 230 (371)
.+++..+++.-.+-|+|||.+++....
T Consensus 307 ~~~~~~ll~~~~~~L~pgG~l~~~~~~ 333 (385)
T 2b78_A 307 SKDYHKLIRQGLEILSENGLIIASTNA 333 (385)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 356667888888999999999988754
|
| >3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A* | Back alignment and structure |
|---|
Probab=93.35 E-value=0.36 Score=45.46 Aligned_cols=70 Identities=11% Similarity=0.057 Sum_probs=42.8
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC---Ccc-eeeec
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL---SKK-YFATG 139 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~---~~~-~f~~g 139 (371)
.-+|+|+|||+|+.|+.+. . .. . -.|+.+|+-..-...+=+++.. ... .+..+
T Consensus 126 g~~VlD~~aG~G~~~i~~a--------~--~g--------~-----~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~ 182 (278)
T 3k6r_A 126 DELVVDMFAGIGHLSLPIA--------V--YG--------K-----AKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNM 182 (278)
T ss_dssp TCEEEETTCTTTTTTHHHH--------H--HT--------C-----CEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECS
T ss_pred CCEEEEecCcCcHHHHHHH--------H--hc--------C-----CeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeC
Confidence 4689999999999999877 2 11 1 1578888766655555444321 112 23445
Q ss_pred cCCCcccccCCCCceeEEEec
Q 017439 140 VPGSFHGRLFPESSLHVAHTS 160 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss 160 (371)
... .+.+.+.+|.++..
T Consensus 183 D~~----~~~~~~~~D~Vi~~ 199 (278)
T 3k6r_A 183 DNR----DFPGENIADRILMG 199 (278)
T ss_dssp CTT----TCCCCSCEEEEEEC
T ss_pred cHH----HhccccCCCEEEEC
Confidence 533 23466778887743
|
| >3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0 | Back alignment and structure |
|---|
Probab=93.25 E-value=0.16 Score=47.01 Aligned_cols=52 Identities=19% Similarity=0.390 Sum_probs=39.0
Q ss_pred CceEEeeecCCCCcccHHHHH------------HHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhh
Q 017439 63 STFKIADLGCSTGPNTFIAMQ------------NIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTL 125 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~------------~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~l 125 (371)
..-+|+|+|||+|..|..+.. ..++.+++ ++.. .+ .++++..|...-||..+
T Consensus 29 ~~~~VLEIG~G~G~lt~~La~~~~~V~avEid~~~~~~~~~-~~~~-------~~---~v~~i~~D~~~~~~~~~ 92 (255)
T 3tqs_A 29 KTDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQK-KYNQ-------QK---NITIYQNDALQFDFSSV 92 (255)
T ss_dssp TTCEEEEECCTTTTTHHHHTTTSSEEEEEECCHHHHHHHHH-HHTT-------CT---TEEEEESCTTTCCGGGS
T ss_pred CcCEEEEEcccccHHHHHHHHhCCEEEEEECCHHHHHHHHH-HHhh-------CC---CcEEEEcchHhCCHHHh
Confidence 346899999999999999886 55666666 5432 23 57899999988886654
|
| >4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A* | Back alignment and structure |
|---|
Probab=93.20 E-value=0.35 Score=50.81 Aligned_cols=47 Identities=21% Similarity=0.251 Sum_probs=29.5
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHHhhcccccccCCCCCceEEeeecCCCCcccHHHHHH
Q 017439 27 AKNSIYQEAIVNGSKGMIAAGIRKTLDLKSLRLDTSSTFKIADLGCSTGPNTFIAMQN 84 (371)
Q Consensus 27 ~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~IaDlGCs~G~Ns~~~~~~ 84 (371)
-+...+|+++..+.++. ..-.. + ..+..+|+|+|||+|+.+...+.+
T Consensus 332 vKy~~Ye~AI~~Al~d~--------~~~~~-~--~~~~~vVldVGaGrGpLv~~al~A 378 (637)
T 4gqb_A 332 IKYSQYQQAIYKCLLDR--------VPEEE-K--DTNVQVLMVLGAGRGPLVNASLRA 378 (637)
T ss_dssp HHHHHHHHHHHHHHHHH--------SCGGG-T--TTCEEEEEEESCTTSHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHh--------hhhcc-c--cCCCcEEEEECCCCcHHHHHHHHH
Confidence 45566666665544333 21111 1 356789999999999998777643
|
| >3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A* | Back alignment and structure |
|---|
Probab=93.02 E-value=0.32 Score=51.65 Aligned_cols=28 Identities=14% Similarity=0.252 Sum_probs=23.3
Q ss_pred HhhHHHHHHHHHhhcccCceEEEEecCc
Q 017439 204 KNDIESFLNARAQELVPGGLLLLLTPTI 231 (371)
Q Consensus 204 ~~D~~~FL~~Ra~EL~pGG~lvl~~~gr 231 (371)
.+|...+++.-.+-|+|||+|++....+
T Consensus 633 ~~~~~~ll~~a~~~LkpgG~L~~s~~~~ 660 (703)
T 3v97_A 633 QRDHLALMKDLKRLLRAGGTIMFSNNKR 660 (703)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEECCT
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEECCc
Confidence 4677788988899999999999887654
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=92.94 E-value=0.088 Score=54.29 Aligned_cols=21 Identities=24% Similarity=0.515 Sum_probs=18.3
Q ss_pred CCceEEeeecCCCCcccHHHH
Q 017439 62 SSTFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~ 82 (371)
.++.||+|+|||.|..|..+.
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la 85 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLA 85 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHH
T ss_pred CCCCeEEEECCCCcHHHHHHH
Confidence 457899999999999888776
|
| >3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A* | Back alignment and structure |
|---|
Probab=92.66 E-value=1.8 Score=40.69 Aligned_cols=19 Identities=32% Similarity=0.592 Sum_probs=16.6
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~ 82 (371)
..+|+|||||.|.-|..++
T Consensus 75 ~~~VLDLGaAPGGWSQvAa 93 (277)
T 3evf_A 75 EGRVIDLGCGRGGWCYYAA 93 (277)
T ss_dssp CEEEEEETCTTCHHHHHHH
T ss_pred CCEEEEecCCCCHHHHHHH
Confidence 3589999999999998776
|
| >2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=92.44 E-value=0.11 Score=49.10 Aligned_cols=20 Identities=30% Similarity=0.506 Sum_probs=17.4
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~ 82 (371)
..-+|+|+|||+|..|..+.
T Consensus 42 ~~~~VLDiG~G~G~lt~~La 61 (299)
T 2h1r_A 42 SSDIVLEIGCGTGNLTVKLL 61 (299)
T ss_dssp TTCEEEEECCTTSTTHHHHT
T ss_pred CcCEEEEEcCcCcHHHHHHH
Confidence 34699999999999999876
|
| >2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638} | Back alignment and structure |
|---|
Probab=91.96 E-value=0.83 Score=44.19 Aligned_cols=102 Identities=13% Similarity=-0.021 Sum_probs=58.1
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC---CCcceeeecc
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP---LSKKYFATGV 140 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~---~~~~~f~~gv 140 (371)
..+|+|+| |+|..++.+. . . .| .-+|+.-|+...--...=+.+. -.+--|..|.
T Consensus 173 ~~~VLDlG-G~G~~~~~la--------~-~----------~~---~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D 229 (373)
T 2qm3_A 173 NKDIFVLG-DDDLTSIALM--------L-S----------GL---PKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFD 229 (373)
T ss_dssp TCEEEEES-CTTCHHHHHH--------H-H----------TC---CSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCC
T ss_pred CCEEEEEC-CCCHHHHHHH--------H-h----------CC---CCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEECh
Confidence 47999999 9999998765 2 1 11 2367777774332111111111 0122244443
Q ss_pred CCCcccccC--CCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 141 PGSFHGRLF--PESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 141 pgSFy~rLf--P~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
+...|- +++++|+|+++..+|+. +...||+.-.+-|
T Consensus 230 ---~~~~l~~~~~~~fD~Vi~~~p~~~~---------------------------------------~~~~~l~~~~~~L 267 (373)
T 2qm3_A 230 ---LRKPLPDYALHKFDTFITDPPETLE---------------------------------------AIRAFVGRGIATL 267 (373)
T ss_dssp ---TTSCCCTTTSSCBSEEEECCCSSHH---------------------------------------HHHHHHHHHHHTB
T ss_pred ---hhhhchhhccCCccEEEECCCCchH---------------------------------------HHHHHHHHHHHHc
Confidence 222121 24689999997654431 1255788888999
Q ss_pred ccCceE-EEEecC
Q 017439 219 VPGGLL-LLLTPT 230 (371)
Q Consensus 219 ~pGG~l-vl~~~g 230 (371)
+|||++ ++.+..
T Consensus 268 kpgG~~~~~~~~~ 280 (373)
T 2qm3_A 268 KGPRCAGYFGITR 280 (373)
T ss_dssp CSTTCEEEEEECT
T ss_pred ccCCeEEEEEEec
Confidence 999965 665544
|
| >3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A* | Back alignment and structure |
|---|
Probab=91.86 E-value=0.28 Score=44.78 Aligned_cols=19 Identities=11% Similarity=0.050 Sum_probs=17.4
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~ 82 (371)
.-+|+|+|||||..++.+.
T Consensus 16 g~~VlDIGtGsG~l~i~la 34 (225)
T 3kr9_A 16 GAILLDVGSDHAYLPIELV 34 (225)
T ss_dssp TEEEEEETCSTTHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHH
Confidence 4799999999999999887
|
| >1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32 | Back alignment and structure |
|---|
Probab=91.73 E-value=0.21 Score=43.35 Aligned_cols=77 Identities=19% Similarity=0.210 Sum_probs=43.6
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCC--cceeeecc
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLS--KKYFATGV 140 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~--~~~f~~gv 140 (371)
...+|+|+|||+|..++.+. . . .+ . +++..|.-..--...=+.+... +--+..+.
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~--------~-~----------~~---~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d 105 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGAL--------L-L----------GA---K-EVICVEVDKEAVDVLIENLGEFKGKFKVFIGD 105 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHH--------H-T----------TC---S-EEEEEESCHHHHHHHHHHTGGGTTSEEEEESC
T ss_pred CcCEEEEeeCCCCHHHHHHH--------H-c----------CC---C-EEEEEECCHHHHHHHHHHHHHcCCCEEEEECc
Confidence 34689999999999888766 2 1 00 1 4666665433222222222111 12233333
Q ss_pred CCCcccccCCCCceeEEEecCCccccCC
Q 017439 141 PGSFHGRLFPESSLHVAHTSNALPWLSK 168 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~alHWLS~ 168 (371)
+.. +| +++|+++++-.+|+.++
T Consensus 106 ---~~~--~~-~~~D~v~~~~p~~~~~~ 127 (207)
T 1wy7_A 106 ---VSE--FN-SRVDIVIMNPPFGSQRK 127 (207)
T ss_dssp ---GGG--CC-CCCSEEEECCCCSSSST
T ss_pred ---hHH--cC-CCCCEEEEcCCCccccC
Confidence 222 23 48999999999888653
|
| >3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei} | Back alignment and structure |
|---|
Probab=91.59 E-value=0.62 Score=47.91 Aligned_cols=143 Identities=13% Similarity=0.198 Sum_probs=70.6
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC--CC-Ccceeeecc
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV--PL-SKKYFATGV 140 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l--~~-~~~~f~~gv 140 (371)
..+|+|.+||+|..-+.+...+.+.-........ .. .- .++++..|+-..-....-..+ .. ..+ +-.-.
T Consensus 245 ~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~--~~--~~---~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~-i~i~~ 316 (544)
T 3khk_A 245 KGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNAS--EQ--KK---QISVYGQESNPTTWKLAAMNMVIRGIDFN-FGKKN 316 (544)
T ss_dssp SEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHH--HH--GG---GEEEEECCCCHHHHHHHHHHHHHTTCCCB-CCSSS
T ss_pred CCeEeCcccCcCcHHHHHHHHHHHhccccccchH--HH--hh---hceEEEEeCCHHHHHHHHHHHHHhCCCcc-cceec
Confidence 3599999999998777766554432221000000 00 00 357888777554432221111 10 111 11122
Q ss_pred CCCcccccCCCCceeEEEecCCc---cccCCCCccccCCCCCCcCCCc---eeecCCCHHHHHHHHHHHHhhHHHHHHHH
Q 017439 141 PGSFHGRLFPESSLHVAHTSNAL---PWLSKIPKEITNSNSPAWNRGH---ILCSGFEKEVAEAYSAQFKNDIESFLNAR 214 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~al---HWLS~vP~~l~d~~~~~~nkg~---i~~~~~~~~~~~ay~~Q~~~D~~~FL~~R 214 (371)
+-+|....++...+|+|+++=-+ .|-.. .+... +-|.-|. .... .++.- ..|+ .|+..-
T Consensus 317 gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~---~~~~d--~r~~~g~~~~~~~~-~~~~~--------~~~~-~Fl~~~ 381 (544)
T 3khk_A 317 ADSFLDDQHPDLRADFVMTNPPFNMKDWWHE---KLADD--PRWTINTNGEKRIL-TPPTG--------NANF-AWMLHM 381 (544)
T ss_dssp CCTTTSCSCTTCCEEEEEECCCSSCCSCCCG---GGTTC--GGGEECCC--CEEC-CCCTT--------CTHH-HHHHHH
T ss_pred cchhcCcccccccccEEEECCCcCCccccch---hhhhh--hhhhcCcccccccc-cCCCc--------chhH-HHHHHH
Confidence 33555666778999999997332 36321 11110 0000000 0000 00000 1122 489999
Q ss_pred HhhcccCceEEEEec
Q 017439 215 AQELVPGGLLLLLTP 229 (371)
Q Consensus 215 a~EL~pGG~lvl~~~ 229 (371)
.+-|+|||+++++++
T Consensus 382 l~~Lk~gGr~aiVlP 396 (544)
T 3khk_A 382 LYHLAPTGSMALLLA 396 (544)
T ss_dssp HHTEEEEEEEEEEEE
T ss_pred HHHhccCceEEEEec
Confidence 999999999999985
|
| >3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12} | Back alignment and structure |
|---|
Probab=91.56 E-value=0.28 Score=47.98 Aligned_cols=26 Identities=23% Similarity=0.263 Sum_probs=21.2
Q ss_pred hhHHHHHHHHHhhcccCceEEEEecC
Q 017439 205 NDIESFLNARAQELVPGGLLLLLTPT 230 (371)
Q Consensus 205 ~D~~~FL~~Ra~EL~pGG~lvl~~~g 230 (371)
+++..++..-.+-|+|||.+++....
T Consensus 316 ~~~~~~l~~~~~~LkpgG~l~~~~~~ 341 (396)
T 3c0k_A 316 RGYKDINMLAIQLLNEGGILLTFSCS 341 (396)
T ss_dssp THHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 56667888888999999999988743
|
| >2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45 | Back alignment and structure |
|---|
Probab=91.12 E-value=0.61 Score=46.34 Aligned_cols=22 Identities=27% Similarity=0.406 Sum_probs=18.7
Q ss_pred HHHHHHHhhcccCceEEEEecC
Q 017439 209 SFLNARAQELVPGGLLLLLTPT 230 (371)
Q Consensus 209 ~FL~~Ra~EL~pGG~lvl~~~g 230 (371)
.||+.-.+-|+|||+++++++.
T Consensus 288 ~fl~~~~~~Lk~gG~~a~V~p~ 309 (445)
T 2okc_A 288 NFLQHMMLMLKTGGRAAVVLPD 309 (445)
T ss_dssp HHHHHHHHHEEEEEEEEEEEEH
T ss_pred HHHHHHHHHhccCCEEEEEECC
Confidence 5788888899999999999853
|
| >1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A | Back alignment and structure |
|---|
Probab=90.83 E-value=0.099 Score=47.81 Aligned_cols=21 Identities=24% Similarity=0.286 Sum_probs=18.2
Q ss_pred CceEEeeecCCCCcccHHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAMQ 83 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~ 83 (371)
..-+|+|+|||+|..|..+.+
T Consensus 30 ~~~~VLDiG~G~G~lt~~l~~ 50 (244)
T 1qam_A 30 EHDNIFEIGSGKGHFTLELVQ 50 (244)
T ss_dssp TTCEEEEECCTTSHHHHHHHH
T ss_pred CCCEEEEEeCCchHHHHHHHH
Confidence 346899999999999998874
|
| >2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A* | Back alignment and structure |
|---|
Probab=90.73 E-value=0.22 Score=47.71 Aligned_cols=18 Identities=17% Similarity=0.235 Sum_probs=16.0
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~ 82 (371)
.-+|+|+|||+|..|+. .
T Consensus 196 ~~~VLDlg~G~G~~~l~-a 213 (336)
T 2yx1_A 196 NDVVVDMFAGVGPFSIA-C 213 (336)
T ss_dssp TCEEEETTCTTSHHHHH-T
T ss_pred CCEEEEccCccCHHHHh-c
Confidence 46899999999999987 6
|
| >3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus} | Back alignment and structure |
|---|
Probab=90.47 E-value=1.4 Score=41.58 Aligned_cols=19 Identities=37% Similarity=0.604 Sum_probs=16.7
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~ 82 (371)
..+|+|||||.|..|..++
T Consensus 91 ~~~VLDLGaAPGGWsQvAa 109 (282)
T 3gcz_A 91 TGIVVDLGCGRGGWSYYAA 109 (282)
T ss_dssp CEEEEEETCTTCHHHHHHH
T ss_pred CCEEEEeCCCCCHHHHHHH
Confidence 4589999999999998776
|
| >3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A* | Back alignment and structure |
|---|
Probab=90.40 E-value=0.59 Score=45.34 Aligned_cols=19 Identities=16% Similarity=0.125 Sum_probs=16.3
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~ 82 (371)
..+|+|+|||+|..++.+.
T Consensus 218 ~~~vLD~gCGsG~~~i~~a 236 (373)
T 3tm4_A 218 GGSVLDPMCGSGTILIELA 236 (373)
T ss_dssp SCCEEETTCTTCHHHHHHH
T ss_pred CCEEEEccCcCcHHHHHHH
Confidence 3679999999999888776
|
| >3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus} | Back alignment and structure |
|---|
Probab=90.07 E-value=1.8 Score=46.69 Aligned_cols=24 Identities=17% Similarity=0.275 Sum_probs=20.8
Q ss_pred HHHHHHHHHhhcccCceEEEEecC
Q 017439 207 IESFLNARAQELVPGGLLLLLTPT 230 (371)
Q Consensus 207 ~~~FL~~Ra~EL~pGG~lvl~~~g 230 (371)
...|+..-.+-|+|||+++++++.
T Consensus 444 y~aFIe~Al~lLKpGGrLAfIlP~ 467 (878)
T 3s1s_A 444 EALFLELVTELVQDGTVISAIMPK 467 (878)
T ss_dssp HHHHHHHHHHHSCTTCEEEEEEET
T ss_pred HHHHHHHHHHhcCCCcEEEEEECh
Confidence 556899989999999999999964
|
| >3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A* | Back alignment and structure |
|---|
Probab=89.50 E-value=0.43 Score=44.68 Aligned_cols=47 Identities=13% Similarity=0.194 Sum_probs=31.7
Q ss_pred EEeeecCCCCcccHHHHH------------HHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhh
Q 017439 66 KIADLGCSTGPNTFIAMQ------------NIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNT 124 (371)
Q Consensus 66 ~IaDlGCs~G~Ns~~~~~------------~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~ 124 (371)
+|+|+|||+|..|..+.. ..++.+++ ++. .. .++++..|.-.-||..
T Consensus 49 ~VLEIG~G~G~lt~~L~~~~~~V~avEid~~~~~~l~~-~~~--------~~---~v~vi~~D~l~~~~~~ 107 (271)
T 3fut_A 49 PVFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLEE-TLS--------GL---PVRLVFQDALLYPWEE 107 (271)
T ss_dssp CEEEECCTTSHHHHHHHHTTCCEEEEESCGGGHHHHHH-HTT--------TS---SEEEEESCGGGSCGGG
T ss_pred eEEEEeCchHHHHHHHHHcCCEEEEEECCHHHHHHHHH-hcC--------CC---CEEEEECChhhCChhh
Confidence 999999999999999886 33444444 332 11 4677777776666543
|
| >1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A* | Back alignment and structure |
|---|
Probab=89.43 E-value=1.3 Score=43.92 Aligned_cols=20 Identities=25% Similarity=0.291 Sum_probs=17.5
Q ss_pred ceEEeeecCCCCcccHHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAMQ 83 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~ 83 (371)
.-+|+|+|||+|..|+.+..
T Consensus 287 ~~~VLDlgcG~G~~~~~la~ 306 (433)
T 1uwv_A 287 EDRVLDLFCGMGNFTLPLAT 306 (433)
T ss_dssp TCEEEEESCTTTTTHHHHHT
T ss_pred CCEEEECCCCCCHHHHHHHh
Confidence 46899999999999998873
|
| >3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus} | Back alignment and structure |
|---|
Probab=89.30 E-value=1.5 Score=44.95 Aligned_cols=130 Identities=13% Similarity=0.240 Sum_probs=67.4
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhc-----CCCCcceee
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKS-----VPLSKKYFA 137 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~-----l~~~~~~f~ 137 (371)
...+|+|.+||+|...+.+... ... .+ ..+++..|+-..-..-.-.. +.....-+.
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~---------l~~-------~~---~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~ 281 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRY---------SRQ-------PQ---TVVYFGQELNTSTYNLARMNMILHGVPIENQFLH 281 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHH---------CSC-------TT---TCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEE
T ss_pred CCCEEeecccchhHHHHHHHHH---------HHh-------cc---CceEEEEECcHHHHHHHHHHHHHcCCCcCccceE
Confidence 4679999999999987776632 111 11 34677776654433222111 110111111
Q ss_pred eccCCCccc--ccCCCCceeEEEec--CCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHH
Q 017439 138 TGVPGSFHG--RLFPESSLHVAHTS--NALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNA 213 (371)
Q Consensus 138 ~gvpgSFy~--rLfP~~Svd~~~Ss--~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~ 213 (371)
.| -+|.. ..++...+|+|+++ +...|-.. .....+.....| |.+. ..+ ..|+ .|+..
T Consensus 282 ~g--DtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~-~~~~~d~rf~~~--G~~~-~~s------------~~~~-~Fl~~ 342 (542)
T 3lkd_A 282 NA--DTLDEDWPTQEPTNFDGVLMNPPYSAKWSAS-SGFMDDPRFSPF--GKLA-PKS------------KADF-AFLLH 342 (542)
T ss_dssp ES--CTTTSCSCCSSCCCBSEEEECCCTTCCCCCC-GGGGGSTTTGGG--SSCC-CTT------------CCHH-HHHHH
T ss_pred ec--ceecccccccccccccEEEecCCcCCccccc-hhhhhhhhhhhh--hhcC-CCc------------hhhH-HHHHH
Confidence 11 23333 23567899999998 55566211 111112111001 1000 011 1223 48888
Q ss_pred HHhhcc-cCceEEEEecC
Q 017439 214 RAQELV-PGGLLLLLTPT 230 (371)
Q Consensus 214 Ra~EL~-pGG~lvl~~~g 230 (371)
-.+-|+ |||+++++++.
T Consensus 343 ~l~~Lk~~gGr~a~VlP~ 360 (542)
T 3lkd_A 343 GYYHLKQDNGVMAIVLPH 360 (542)
T ss_dssp HHHTBCTTTCEEEEEEET
T ss_pred HHHHhCCCceeEEEEecc
Confidence 889999 99999999864
|
| >3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A* | Back alignment and structure |
|---|
Probab=87.89 E-value=6.2 Score=37.49 Aligned_cols=21 Identities=33% Similarity=0.570 Sum_probs=18.4
Q ss_pred CCceEEeeecCCCCcccHHHH
Q 017439 62 SSTFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~ 82 (371)
....+++|||||.|..|..++
T Consensus 80 ~~g~~vlDLGaaPGgWsqva~ 100 (300)
T 3eld_A 80 RITGRVLDLGCGRGGWSYYAA 100 (300)
T ss_dssp CCCEEEEEETCTTCHHHHHHH
T ss_pred CCCCEEEEcCCCCCHHHHHHH
Confidence 346899999999999998877
|
| >1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A | Back alignment and structure |
|---|
Probab=87.16 E-value=0.97 Score=41.60 Aligned_cols=51 Identities=12% Similarity=0.199 Sum_probs=31.4
Q ss_pred ceEEeeecCCCCcccHHHHH-------------HHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhh
Q 017439 64 TFKIADLGCSTGPNTFIAMQ-------------NIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLF 126 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~-------------~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF 126 (371)
.-+|+|+|||+|..|. +-. ..++.+++ ++.. .+ .+++...|.-.-||..+|
T Consensus 22 ~~~VLEIG~G~G~lt~-l~~~~~~~v~avEid~~~~~~a~~-~~~~-------~~---~v~~i~~D~~~~~~~~~~ 85 (252)
T 1qyr_A 22 GQAMVEIGPGLAALTE-PVGERLDQLTVIELDRDLAARLQT-HPFL-------GP---KLTIYQQDAMTFNFGELA 85 (252)
T ss_dssp TCCEEEECCTTTTTHH-HHHTTCSCEEEECCCHHHHHHHHT-CTTT-------GG---GEEEECSCGGGCCHHHHH
T ss_pred cCEEEEECCCCcHHHH-hhhCCCCeEEEEECCHHHHHHHHH-Hhcc-------CC---ceEEEECchhhCCHHHhh
Confidence 4589999999999999 421 11122222 1110 23 577888888777776664
|
| >2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A* | Back alignment and structure |
|---|
Probab=84.58 E-value=0.7 Score=45.24 Aligned_cols=18 Identities=17% Similarity=-0.033 Sum_probs=16.7
Q ss_pred eEEeeecCCCCcccHHHH
Q 017439 65 FKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 65 ~~IaDlGCs~G~Ns~~~~ 82 (371)
.+|+|+|||+|.-++.+.
T Consensus 49 ~~VLDl~aGtG~~~l~~a 66 (378)
T 2dul_A 49 KIVLDALSATGIRGIRFA 66 (378)
T ss_dssp SEEEESSCTTSHHHHHHH
T ss_pred CEEEECCCchhHHHHHHH
Confidence 689999999999999887
|
| >3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A* | Back alignment and structure |
|---|
Probab=83.66 E-value=2.3 Score=41.84 Aligned_cols=51 Identities=16% Similarity=0.130 Sum_probs=31.2
Q ss_pred CCCCCchHHhhHHHHHHHHHHHHHHHHHHHhhcccccccCCCCCceEEeeecCCCCcccHHHHH
Q 017439 20 GDGPHSYAKNSIYQEAIVNGSKGMIAAGIRKTLDLKSLRLDTSSTFKIADLGCSTGPNTFIAMQ 83 (371)
Q Consensus 20 G~g~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~IaDlGCs~G~Ns~~~~~ 83 (371)
|.....|+-+...-+.....+...+ ... .....+|+|++||+|..++.+.+
T Consensus 22 ~~~~~Ffn~~~~~nR~l~~~~~~~~---~~~----------~~~g~~VLDlfaGtG~~sl~aa~ 72 (392)
T 3axs_A 22 SDMPVFYNPRMRVNRDLAVLGLEYL---CKK----------LGRPVKVADPLSASGIRAIRFLL 72 (392)
T ss_dssp TTCCSSCCGGGHHHHHHHHHHHHHH---HHH----------HCSCEEEEESSCTTSHHHHHHHH
T ss_pred CCCCEEEcCCcHHHHHHHHHHHHHH---hhc----------cCCCCEEEECCCcccHHHHHHHH
Confidence 3456778666665554433322221 110 01247999999999999998873
|
| >3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B* | Back alignment and structure |
|---|
Probab=83.59 E-value=0.79 Score=42.05 Aligned_cols=21 Identities=24% Similarity=0.329 Sum_probs=18.0
Q ss_pred CceEEeeecCCCCcccHHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAMQ 83 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~ 83 (371)
..-+|+|+|||+|..|..+.+
T Consensus 31 ~~~~VLDiG~G~G~lt~~L~~ 51 (249)
T 3ftd_A 31 EGNTVVEVGGGTGNLTKVLLQ 51 (249)
T ss_dssp TTCEEEEEESCHHHHHHHHTT
T ss_pred CcCEEEEEcCchHHHHHHHHH
Confidence 346899999999999998874
|
| >2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38 | Back alignment and structure |
|---|
Probab=83.35 E-value=5.9 Score=37.43 Aligned_cols=19 Identities=16% Similarity=0.078 Sum_probs=17.2
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~ 82 (371)
.-+|+|+|||+|.-|+.+.
T Consensus 103 g~~VLDlcaG~G~kt~~la 121 (309)
T 2b9e_A 103 GSHVIDACAAPGNKTSHLA 121 (309)
T ss_dssp TCEEEESSCTTCHHHHHHH
T ss_pred CCEEEEeCCChhHHHHHHH
Confidence 4699999999999999877
|
| >2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B* | Back alignment and structure |
|---|
Probab=83.08 E-value=2.4 Score=43.43 Aligned_cols=21 Identities=29% Similarity=0.597 Sum_probs=18.3
Q ss_pred HHHHHHHhhcccCceEEEEec
Q 017439 209 SFLNARAQELVPGGLLLLLTP 229 (371)
Q Consensus 209 ~FL~~Ra~EL~pGG~lvl~~~ 229 (371)
.|+..-.+-|+|||+++++++
T Consensus 293 ~Fl~~~l~~Lk~gGr~a~V~p 313 (541)
T 2ar0_A 293 CFMQHIIETLHPGGRAAVVVP 313 (541)
T ss_dssp HHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHhCCCCEEEEEec
Confidence 478888889999999999985
|
| >3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=82.87 E-value=1.2 Score=41.81 Aligned_cols=22 Identities=14% Similarity=0.146 Sum_probs=18.8
Q ss_pred CceEEeeecCCCCcccHHHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAMQN 84 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ 84 (371)
..-+|+|+|||+|..|..+...
T Consensus 42 ~~~~VLEIG~G~G~lt~~La~~ 63 (279)
T 3uzu_A 42 RGERMVEIGPGLGALTGPVIAR 63 (279)
T ss_dssp TTCEEEEECCTTSTTHHHHHHH
T ss_pred CcCEEEEEccccHHHHHHHHHh
Confidence 3468999999999999998853
|
| >1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24 | Back alignment and structure |
|---|
Probab=81.91 E-value=1.2 Score=40.27 Aligned_cols=21 Identities=19% Similarity=0.186 Sum_probs=18.3
Q ss_pred CceEEeeecCCCCcccHHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAMQ 83 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~ 83 (371)
..-+|+|+|||+|..|..+..
T Consensus 29 ~~~~VLDiG~G~G~~~~~l~~ 49 (245)
T 1yub_A 29 ETDTVYEIGTGKGHLTTKLAK 49 (245)
T ss_dssp SSEEEEECSCCCSSCSHHHHH
T ss_pred CCCEEEEEeCCCCHHHHHHHH
Confidence 457999999999999998873
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 371 | ||||
| d1m6ex_ | 359 | c.66.1.35 (X:) Salicylic acid carboxyl methyltrans | 1e-100 |
| >d1m6ex_ c.66.1.35 (X:) Salicylic acid carboxyl methyltransferase (SAMT) {Clarkia breweri [TaxId: 36903]} Length = 359 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Salicylic acid carboxyl methyltransferase (SAMT) domain: Salicylic acid carboxyl methyltransferase (SAMT) species: Clarkia breweri [TaxId: 36903]
Score = 297 bits (763), Expect = e-100
Identities = 115/369 (31%), Positives = 173/369 (46%), Gaps = 34/369 (9%)
Query: 16 PMVGGDGPHSYAKNSIYQEAIVNGSKGMIAAGIRKTLDLKSLRLDTSSTFKIADLGCSTG 75
M GG G +SYA NS Q +++ +K + A I ++ ++ IADLGCS+G
Sbjct: 8 HMKGGAGENSYAMNSFIQRQVISITKPITEAAITALYSGDTV----TTRLAIADLGCSSG 63
Query: 76 PNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKK- 134
PN A+ +I+ +E ++ + E E+Q+F ND NDFN +F+S+P+
Sbjct: 64 PNALFAVTELIKTVEELRKKMGRENSP------EYQIFLNDLPGNDFNAIFRSLPIENDV 117
Query: 135 ---YFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGF 191
F GVPGSF+GRLFP ++LH H+S +L WLS++P I ++ + +
Sbjct: 118 DGVCFINGVPGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYM-----ANTC 172
Query: 192 EKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGS 251
+ V AY QF+ D FL RAQE+VPGG ++L R ST + L
Sbjct: 173 PQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILGRRSEDR-ASTECCLIWQLLAM 231
Query: 252 CLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFTHPLVHMVY-- 309
L + + GLI EEK+D FN+P Y P E+ I + +F I+ +
Sbjct: 232 ALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIEASEIYWSSCTKDG 291
Query: 310 --------SAEFWASLSRAAFGGLVGQHFGYQFVDRIFNYYSTKLAENMSSICDGKTQDK 361
A RA L+ HFG ++ +F+ Y + E MS +
Sbjct: 292 DGGGSVEEEGYNVARCMRAVAEPLLLDHFGEAIIEDVFHRYKLLIIERMSK----EKTKF 347
Query: 362 IELFVLLRR 370
I + V L R
Sbjct: 348 INVIVSLIR 356
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 371 | |||
| d1m6ex_ | 359 | Salicylic acid carboxyl methyltransferase (SAMT) { | 100.0 | |
| d1xxla_ | 234 | Hypothetical protein YcgJ {Bacillus subtilis [TaxI | 99.19 | |
| d2a14a1 | 257 | Indolethylamine N-methyltransferase, INMT {Human ( | 99.18 | |
| d1vl5a_ | 231 | Hypothetical protein BH2331 {Bacillus halodurans [ | 99.16 | |
| d1jqea_ | 280 | Histamine methyltransferase {Human (Homo sapiens) | 99.12 | |
| d1xtpa_ | 254 | Hypothetical protein Lmaj004091aaa (LmjF30.0810) { | 99.1 | |
| d2o57a1 | 282 | Putative sarcosine dimethylglycine methyltransfera | 99.03 | |
| d2fk8a1 | 280 | Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri | 98.99 | |
| d2ex4a1 | 222 | Adrenal gland protein AD-003 (C9orf32) {Human (Hom | 98.99 | |
| d1tw3a2 | 253 | Carminomycin 4-O-methyltransferase {Streptomyces p | 98.98 | |
| d1vlma_ | 208 | Possible histamine N-methyltransferase TM1293 {The | 98.96 | |
| d2g72a1 | 263 | Phenylethanolamine N-methyltransferase, PNMTase {H | 98.96 | |
| d1im8a_ | 225 | Hypothetical protein HI0319 (YecO) {Haemophilus in | 98.95 | |
| d1kpia_ | 291 | CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]} | 98.91 | |
| d1ve3a1 | 226 | Hypothetical protein PH0226 {Archaeon Pyrococcus h | 98.9 | |
| d1kpga_ | 285 | CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]} | 98.88 | |
| d1nkva_ | 245 | Hypothetical Protein YjhP {Escherichia coli [TaxId | 98.86 | |
| d2p7ia1 | 225 | Hypothetical protein ECA1738 {Erwinia carotovora [ | 98.79 | |
| d2bzga1 | 229 | Thiopurine S-methyltransferase {Human (Homo sapien | 98.79 | |
| d1pjza_ | 201 | Thiopurine S-methyltransferase {Pseudomonas syring | 98.77 | |
| d1qzza2 | 256 | Aclacinomycin-10-hydroxylase RdmB {Streptomyces pu | 98.67 | |
| d2i6ga1 | 198 | Putative methyltransferase TehB {Salmonella typhim | 98.64 | |
| d1ri5a_ | 252 | mRNA cap (Guanine N-7) methyltransferase {Fungus ( | 98.56 | |
| d1y8ca_ | 246 | Putative methyltransferase CAC2371 {Clostridium ac | 98.55 | |
| d1wzna1 | 251 | Hypothetical methyltransferase PH1305 {Archaeon Py | 98.52 | |
| d1fp1d2 | 244 | Chalcone O-methyltransferase {Alfalfa (Medicago sa | 98.51 | |
| d2gh1a1 | 281 | Methyltransferase BC2162 {Bacillus cereus [TaxId: | 98.35 | |
| d1kyza2 | 243 | Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltra | 98.35 | |
| d1p91a_ | 268 | rRNA methyltransferase RlmA {Escherichia coli [Tax | 98.34 | |
| d2avna1 | 246 | Hypothetical methyltransferase TM1389 {Thermotoga | 98.32 | |
| d1fp2a2 | 244 | Isoflavone O-methyltransferase {Alfalfa (Medicago | 98.27 | |
| d2fcaa1 | 204 | tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil | 98.03 | |
| d1g6q1_ | 328 | Arginine methyltransferase, HMT1 {Baker's yeast (S | 98.03 | |
| d1xvaa_ | 292 | Glycine N-methyltransferase {Rat (Rattus norvegicu | 98.02 | |
| d1dl5a1 | 213 | Protein-L-isoaspartyl O-methyltransferase {Thermot | 97.88 | |
| d1dusa_ | 194 | Hypothetical protein MJ0882 {Archaeon Methanococcu | 97.87 | |
| d1g8sa_ | 230 | Fibrillarin homologue {Archaeon Methanococcus jann | 97.85 | |
| d1yzha1 | 204 | tRNA (guanine-N(7)-)-methyltransferase TrmB {Strep | 97.84 | |
| d1oria_ | 316 | Protein arginine N-methyltransferase 1, PRMT1 {Rat | 97.77 | |
| d2fyta1 | 311 | Protein arginine N-methyltransferase 3, PRMT3 {Hum | 97.71 | |
| d1nw3a_ | 328 | Catalytic, N-terminal domain of histone methyltran | 97.58 | |
| d1yb2a1 | 250 | Hypothetical protein Ta0852 {Thermoplasma acidophi | 97.56 | |
| d1i1na_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Human ( | 97.48 | |
| d1vbfa_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Sulfolo | 97.45 | |
| d1i9ga_ | 264 | Probable methyltransferase Rv2118c {Mycobacterium | 97.42 | |
| d2nxca1 | 254 | PrmA-like protein TTHA0656 (TT0836) {Thermus therm | 97.31 | |
| d1g8aa_ | 227 | Fibrillarin homologue {Archaeon Pyrococcus horikos | 97.28 | |
| d1l3ia_ | 186 | Precorrin-6Y methyltransferase (CbiT) {Archaeon Me | 97.28 | |
| d1zx0a1 | 229 | Guanidinoacetate methyltransferase {Human (Homo sa | 97.2 | |
| d2b3ta1 | 274 | N5-glutamine methyltransferase, HemK {Escherichia | 97.15 | |
| d1af7a2 | 193 | Chemotaxis receptor methyltransferase CheR, C-term | 97.12 | |
| d1nt2a_ | 209 | Fibrillarin homologue {Archaeon Archaeoglobus fulg | 97.1 | |
| d1u2za_ | 406 | Catalytic, N-terminal domain of histone methyltran | 96.94 | |
| d1jg1a_ | 215 | Protein-L-isoaspartyl O-methyltransferase {Archaeo | 96.92 | |
| d1o54a_ | 266 | Hypothetical protein TM0748 {Thermotoga maritima [ | 96.61 | |
| d2b25a1 | 324 | Hypothetical protein FLJ20628 {Human (Homo sapiens | 96.28 | |
| d1r18a_ | 223 | Protein-L-isoaspartyl O-methyltransferase {Fruit f | 95.92 | |
| d2f8la1 | 328 | Hypothetical protein Lmo1582 {Listeria monocytogen | 95.07 | |
| d2h00a1 | 250 | Methyltransferase 10 domain containing protein MET | 95.0 | |
| d1wxxa2 | 318 | Hypothetical protein TTHA1280, middle and C-termin | 94.34 | |
| d1m6ya2 | 192 | TM0872, methyltransferase domain {Thermotoga marit | 93.31 | |
| d2ih2a1 | 223 | DNA methylase TaqI, N-terminal domain {Thermus aqu | 93.27 | |
| d2as0a2 | 324 | Hypothetical protein PH1915, middle and C-terminal | 92.56 | |
| d2frna1 | 260 | Hypothetical protein PH0793 {Pyrococcus horikoshii | 91.94 | |
| d1wy7a1 | 201 | Hypothetical protein PH1948 {Archaeon Pyrococcus h | 90.53 | |
| d2igta1 | 309 | Putative methyltransferase Atu0340 {Agrobacterium | 89.21 | |
| d2esra1 | 152 | Putative methyltransferase SPy1538 {Streptococcus | 86.06 | |
| d2b78a2 | 317 | Hypothetical protein SMu776, middle and C-terminal | 85.66 | |
| d1qama_ | 235 | rRNA adenine dimethylase {Bacillus subtilis, Ermc' | 85.05 | |
| d1ne2a_ | 197 | Hypothetical protein Ta1320 {Archaeon Thermoplasma | 84.36 | |
| d2okca1 | 425 | Type I restriction enzyme StySJI M protein {Bacter | 82.02 | |
| d1ws6a1 | 171 | Methyltransferase TTHA0928 {Thermus thermophilus [ | 80.92 |
| >d1m6ex_ c.66.1.35 (X:) Salicylic acid carboxyl methyltransferase (SAMT) {Clarkia breweri [TaxId: 36903]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Salicylic acid carboxyl methyltransferase (SAMT) domain: Salicylic acid carboxyl methyltransferase (SAMT) species: Clarkia breweri [TaxId: 36903]
Probab=100.00 E-value=1e-104 Score=783.16 Aligned_cols=341 Identities=34% Similarity=0.546 Sum_probs=312.5
Q ss_pred c-ccceecccCCCCCCchHHhhHHHHHHHHHHHHHHHHHHHhhcccccccCCCCCceEEeeecCCCCcccHHHHHHHHHH
Q 017439 10 I-SPEAYPMVGGDGPHSYAKNSIYQEAIVNGSKGMIAAGIRKTLDLKSLRLDTSSTFKIADLGCSTGPNTFIAMQNIIEA 88 (371)
Q Consensus 10 ~-~~~~~~M~gG~g~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~IaDlGCs~G~Ns~~~~~~ii~~ 88 (371)
| ++++|||+||||++||++||.+|++++..++|+|++||++++.... .+++++|||||||+|+||+.+|+.||++
T Consensus 1 m~~~~~l~M~gG~G~~SYa~NS~~Q~~~i~~~kp~leeai~~~~~~~~----~~~~~~IADlGCS~G~Ntl~~v~~iI~~ 76 (359)
T d1m6ex_ 1 MDVRQVLHMKGGAGENSYAMNSFIQRQVISITKPITEAAITALYSGDT----VTTRLAIADLGCSSGPNALFAVTELIKT 76 (359)
T ss_dssp CCCHHHHCCCCCTTSTTTTSSCHHHHHHHHHTHHHHHHHHHHHHSSSS----SSSEECCEEESCCSSTTTTTGGGTTHHH
T ss_pred CCccEeeccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcccCCC----CCCceEEEEeCCCCCccHHHHHHHHHHH
Confidence 5 8999999999999999999999999999999999999999654222 4678999999999999999999999999
Q ss_pred HHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCC----cceeeeccCCCcccccCCCCceeEEEecCCcc
Q 017439 89 IELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLS----KKYFATGVPGSFHGRLFPESSLHVAHTSNALP 164 (371)
Q Consensus 89 i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~----~~~f~~gvpgSFy~rLfP~~Svd~~~Ss~alH 164 (371)
|++ +|++.+..+ .| +|||||||||+||||+||++||.. ++||++|||||||+||||++|+||+||++|||
T Consensus 77 i~~-~~~~~~~~~--~p---e~qvf~nDLP~NDFNtLF~~L~~~~~~~~~~f~~gvpGSFY~rLfP~~Slh~~~Ss~alH 150 (359)
T d1m6ex_ 77 VEE-LRKKMGREN--SP---EYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFYGRLFPRNTLHFIHSSYSLM 150 (359)
T ss_dssp HHH-HHHSSSCSS--CC---EEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSSSCCSCTTCBSCEEEESCTT
T ss_pred HHH-HHHhcCCCC--CC---eEEEEeCCCCcchHHHHHHhccccccCCCCeEEEecCCchhhhcCCCCceEEeeehhhhh
Confidence 999 998654223 67 999999999999999999999864 47999999999999999999999999999999
Q ss_pred ccCCCCccccCCCCCCcCCCceeecC-CCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEecCcCCCCCCCCCCCc
Q 017439 165 WLSKIPKEITNSNSPAWNRGHILCSG-FEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTPTIRDGIPMFSTPEG 243 (371)
Q Consensus 165 WLS~vP~~l~d~~~~~~nkg~i~~~~-~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~gr~~~~~~~~~~~~ 243 (371)
||||+|+.+.+ |||+||+.+ ++++|.+||++||++||.+||++||+||+|||+|||+++||++.++.+ ++.+
T Consensus 151 WLS~vP~~l~~------n~~~i~~~~~~~~~v~~ay~~Qf~~D~~~FL~~Ra~ELv~GG~mvl~~~gr~~~~~~~-~~~~ 223 (359)
T d1m6ex_ 151 WLSQVPIGIES------NKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILGRRSEDRAS-TECC 223 (359)
T ss_dssp BCSSCCSCCCC------CTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEEECSSSSSSS-TTTS
T ss_pred hhhcCCccccC------CCCcEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeccCCCCCCC-Cccc
Confidence 99999998865 899999875 588899999999999999999999999999999999999999887754 4566
Q ss_pred chHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEeecCcccc----------cccHHH
Q 017439 244 TNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFTHPLVHM----------VYSAEF 313 (371)
Q Consensus 244 ~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~~~p~~~~----------~~~~~~ 313 (371)
.+|++|.++|+|||.||+|++||+|+||+|+|+||++|++++|+++|+|+|+++|.++.+|... ...++.
T Consensus 224 ~~~~~l~~al~dmv~eGlI~eek~dsfn~P~Y~ps~eEv~~~ie~~gsF~i~~~e~~~~~~~~~~~~~~~~~d~~~~~~~ 303 (359)
T d1m6ex_ 224 LIWQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIEASEIYWSSCTKDGDGGGSVEEEGYN 303 (359)
T ss_dssp TTTHHHHHHHHHHHHTTCSCCSTTGGGCCCCBCCCSHHHHHHHHHTTTBCCEEEEEEEEETTCCSSCTTCCSSTTTTTTH
T ss_pred hHHHHHHHHHHHHHHcCCCCHHHHHhccCccccCCHHHHHHHhccCCCeeeeeeEeeecccccccccccccccHHHHHHH
Confidence 7999999999999999999999999999999999999999999999999999999997776531 125779
Q ss_pred HHHhHHHhhhhhhhhhhcHHHHHHHHHHHHHHHHHhhhhhccCCCCCeEEEEEEEEeC
Q 017439 314 WASLSRAAFGGLVGQHFGYQFVDRIFNYYSTKLAENMSSICDGKTQDKIELFVLLRRN 371 (371)
Q Consensus 314 ~a~~iRa~~~~~l~~h~ge~i~delf~r~~~~~~~~~~~~~~~~~~~~~~~~~~L~r~ 371 (371)
+++++||++||++.+|||++|+|+||+||++++++++++ .+.++++++++|+||
T Consensus 304 ~a~~~RA~~e~~l~~hfg~~i~D~lF~r~~~~v~~~~~~----~~~~~~~~~~sL~rK 357 (359)
T d1m6ex_ 304 VARCMRAVAEPLLLDHFGEAIIEDVFHRYKLLIIERMSK----EKTKFINVIVSLIRK 357 (359)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHS----SCCEEEEEEEEEEBC
T ss_pred HHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHhhHhh----cCCceEEEEEEEEec
Confidence 999999999999999999999999999999999999985 457899999999998
|
| >d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein YcgJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.19 E-value=1.1e-10 Score=104.80 Aligned_cols=151 Identities=15% Similarity=0.202 Sum_probs=91.4
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhh---hhhcCCCCcceeeecc
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNT---LFKSVPLSKKYFATGV 140 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~---lF~~l~~~~~~f~~gv 140 (371)
--||+|+|||+|..|..+. + +. + +|+--|+-.+--.. ..+.....+-.|..+.
T Consensus 17 ~~rILDiGcGtG~~~~~la--------~-~~----------~-----~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d 72 (234)
T d1xxla_ 17 EHRVLDIGAGAGHTALAFS--------P-YV----------Q-----ECIGVDATKEMVEVASSFAQEKGVENVRFQQGT 72 (234)
T ss_dssp TCEEEEESCTTSHHHHHHG--------G-GS----------S-----EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECB
T ss_pred CCEEEEeCCcCcHHHHHHH--------H-hC----------C-----eEEEEeCChhhhhhhhhhhcccccccccccccc
Confidence 4689999999999998776 2 11 1 34455544332111 1111111223344444
Q ss_pred CCCccccc-CCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcc
Q 017439 141 PGSFHGRL-FPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELV 219 (371)
Q Consensus 141 pgSFy~rL-fP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 219 (371)
...+ ||++|+|+++|+.++||+.+. ..+|+.-.+=|+
T Consensus 73 ----~~~~~~~~~~fD~v~~~~~l~~~~d~--------------------------------------~~~l~~~~r~Lk 110 (234)
T d1xxla_ 73 ----AESLPFPDDSFDIITCRYAAHHFSDV--------------------------------------RKAVREVARVLK 110 (234)
T ss_dssp ----TTBCCSCTTCEEEEEEESCGGGCSCH--------------------------------------HHHHHHHHHHEE
T ss_pred ----cccccccccccceeeeeceeecccCH--------------------------------------HHHHHHHHHeeC
Confidence 2233 689999999999999995431 236888889999
Q ss_pred cCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEE
Q 017439 220 PGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNT 299 (371)
Q Consensus 220 pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~ 299 (371)
|||++++...+.++.. .++.+.+.+...... ......+.++++..++..| |.+++++.
T Consensus 111 pgG~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~g-f~~~~~~~ 168 (234)
T d1xxla_ 111 QDGRFLLVDHYAPEDP---------VLDEFVNHLNRLRDP------------SHVRESSLSEWQAMFSANQ-LAYQDIQK 168 (234)
T ss_dssp EEEEEEEEEECBCSSH---------HHHHHHHHHHHHHCT------------TCCCCCBHHHHHHHHHHTT-EEEEEEEE
T ss_pred CCcEEEEEEcCCCCCH---------HHHHHHHHHHhhCCC------------cccccCCHHHHHHHHHHCC-CceeEEEE
Confidence 9999999876554321 222222222211111 1122347889999999976 99998887
Q ss_pred eec
Q 017439 300 FTH 302 (371)
Q Consensus 300 ~~~ 302 (371)
+..
T Consensus 169 ~~~ 171 (234)
T d1xxla_ 169 WNL 171 (234)
T ss_dssp EEE
T ss_pred eeC
Confidence 643
|
| >d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase, INMT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arylamine N-methyltransferase domain: Indolethylamine N-methyltransferase, INMT species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.18 E-value=5.5e-11 Score=107.60 Aligned_cols=102 Identities=16% Similarity=-0.021 Sum_probs=77.2
Q ss_pred eccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 138 TGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 138 ~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
..+........+|.+++|+++|..+|||+...+ +|+..+|+..++-
T Consensus 137 ~~~~~~~~~~~~~~~~fD~i~~~~~l~~~~~~~----------------------------------~~~~~~l~~i~~~ 182 (257)
T d2a14a1 137 CDVHLGNPLAPAVLPLADCVLTLLAMECACCSL----------------------------------DAYRAALCNLASL 182 (257)
T ss_dssp CCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSH----------------------------------HHHHHHHHHHHTT
T ss_pred cccccccccccccCCcccEEeehhhHHHhcccH----------------------------------HHHHHHHHHHHhc
Confidence 344455556678999999999999999965432 5777899999999
Q ss_pred cccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEE
Q 017439 218 LVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIM 297 (371)
Q Consensus 218 L~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~ 297 (371)
|||||+|++......+.. .......+.++.+.+|++++++++| |+|+.+
T Consensus 183 LkpGG~li~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~~~~~l~~aG-f~v~~~ 231 (257)
T d2a14a1 183 LKPGGHLVTTVTLRLPSY------------------------------MVGKREFSCVALEKGEVEQAVLDAG-FDIEQL 231 (257)
T ss_dssp EEEEEEEEEEEESSCCEE------------------------------EETTEEEECCCCCHHHHHHHHHHTT-EEEEEE
T ss_pred cCCCcEEEEEEecccccc------------------------------eeccccccccCCCHHHHHHHHHHCC-CEEEEE
Confidence 999999999876543210 0112234667889999999999988 999999
Q ss_pred EEeecCc
Q 017439 298 NTFTHPL 304 (371)
Q Consensus 298 e~~~~p~ 304 (371)
+..+..+
T Consensus 232 ~~~~~~~ 238 (257)
T d2a14a1 232 LHSPQSY 238 (257)
T ss_dssp EEECCCC
T ss_pred EEecccc
Confidence 8775444
|
| >d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein BH2331 species: Bacillus halodurans [TaxId: 86665]
Probab=99.16 E-value=9.8e-11 Score=104.24 Aligned_cols=153 Identities=14% Similarity=0.157 Sum_probs=94.0
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhh---hhhcCCCCcceeee
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNT---LFKSVPLSKKYFAT 138 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~---lF~~l~~~~~~f~~ 138 (371)
...-+|+|+|||+|..|+.+. + + -+ +|...|+-.+-=.. .++.....+--|..
T Consensus 14 ~~~~rVLDiGcG~G~~~~~l~--------~-~----------~~-----~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~ 69 (231)
T d1vl5a_ 14 KGNEEVLDVATGGGHVANAFA--------P-F----------VK-----KVVAFDLTEDILKVARAFIEGNGHQQVEYVQ 69 (231)
T ss_dssp CSCCEEEEETCTTCHHHHHHG--------G-G----------SS-----EEEEEESCHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CCcCEEEEecccCcHHHHHHH--------H-h----------CC-----EEEEEECCHHHHhhhhhcccccccccccccc
Confidence 345799999999999887655 2 1 11 35566664432111 11111112222444
Q ss_pred ccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 139 GVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 139 gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
+. ..+==||++|+|+++|..++||+.+ ...+|+.-++-|
T Consensus 70 ~d---~~~l~~~~~~fD~v~~~~~l~~~~d--------------------------------------~~~~l~~~~r~L 108 (231)
T d1vl5a_ 70 GD---AEQMPFTDERFHIVTCRIAAHHFPN--------------------------------------PASFVSEAYRVL 108 (231)
T ss_dssp CC---C-CCCSCTTCEEEEEEESCGGGCSC--------------------------------------HHHHHHHHHHHE
T ss_pred cc---cccccccccccccccccccccccCC--------------------------------------HHHHHHHHHHhc
Confidence 43 3332268999999999999999643 223678888999
Q ss_pred ccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEE
Q 017439 219 VPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMN 298 (371)
Q Consensus 219 ~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e 298 (371)
+|||++++.....++. ..++.+...+......+ .....+.+++.+.+++.| |+++.++
T Consensus 109 kpgG~l~i~~~~~~~~---------~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~l~~aG-f~~~~~~ 166 (231)
T d1vl5a_ 109 KKGGQLLLVDNSAPEN---------DAFDVFYNYVEKERDYS------------HHRAWKKSDWLKMLEEAG-FELEELH 166 (231)
T ss_dssp EEEEEEEEEEEEBCSS---------HHHHHHHHHHHHHHCTT------------CCCCCBHHHHHHHHHHHT-CEEEEEE
T ss_pred CCCcEEEEEeCCCCCC---------HHHHHHHHHHHhhcccC------------cccCCCHHHHHHHHHHCC-CEEEEEE
Confidence 9999999976554332 12344433332211111 123457899999999987 9998887
Q ss_pred Eee
Q 017439 299 TFT 301 (371)
Q Consensus 299 ~~~ 301 (371)
.+.
T Consensus 167 ~~~ 169 (231)
T d1vl5a_ 167 CFH 169 (231)
T ss_dssp EEE
T ss_pred Eee
Confidence 763
|
| >d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Histamine methyltransferase domain: Histamine methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.12 E-value=2.1e-10 Score=105.82 Aligned_cols=186 Identities=12% Similarity=0.094 Sum_probs=102.9
Q ss_pred hHHhhHHHHHHHHHHHHHHHHHHHhhcc-cccccCCCCCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCC
Q 017439 26 YAKNSIYQEAIVNGSKGMIAAGIRKTLD-LKSLRLDTSSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDN 104 (371)
Q Consensus 26 Y~~nS~~Q~~~~~~~~~~l~~ai~~~~~-~~~~~~~~~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~ 104 (371)
|-+||...+.+- +++++.+.+.+. +.. .+..++|+|+|||+|..|..++..+ .. ++. .
T Consensus 10 ~~~~s~~~~~~~----~~~~~~l~~~l~~l~~----~~~~~~VLDiGcG~G~~~~~ll~~l----~~-~~~--------~ 68 (280)
T d1jqea_ 10 FLNHSTEHQCMQ----EFMDKKLPGIIGRIGD----TKSEIKILSIGGGAGEIDLQILSKV----QA-QYP--------G 68 (280)
T ss_dssp HHHTBSHHHHHH----HHHHHTHHHHTTTTTT----TCSEEEEEEETCTTSHHHHHHHHHH----HH-HST--------T
T ss_pred HHHhCcHHHHHH----HHHHHHHHHHHHHhcc----CCCCCeEEEEcCCCCHHHHHHHHHh----hh-hcc--------C
Confidence 455554443332 444444444332 111 4567899999999999888777433 33 321 1
Q ss_pred CCcceeEEEecCCCcCch---hhhhhcCCCCcce-ee-eccCC----CcccccCCCCceeEEEecCCccccCCCCccccC
Q 017439 105 PSGLEFQVFFNDHSNNDF---NTLFKSVPLSKKY-FA-TGVPG----SFHGRLFPESSLHVAHTSNALPWLSKIPKEITN 175 (371)
Q Consensus 105 p~~~ei~v~~nDlp~NDF---n~lF~~l~~~~~~-f~-~gvpg----SFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d 175 (371)
. .+.+..-|.-.+.- +..+...+....+ |- ...+- +....-++++++|+|+|+.+|||+.+.
T Consensus 69 ~---~~~~~~vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~I~~~~~l~~~~d~------ 139 (280)
T d1jqea_ 69 V---CINNEVVEPSAEQIAKYKELVAKISNLENVKFAWHKETSSEYQSRMLEKKELQKWDFIHMIQMLYYVKDI------ 139 (280)
T ss_dssp C---EEEEEEECCCHHHHHHHHHHHTTCCSCTTEEEEEECSCHHHHHHHHTTSSSCCCEEEEEEESCGGGCSCH------
T ss_pred C---ceEEEEEeCcHHHHHHHHHHHhhccccccccccchhhhhhhhcchhcccCCCCceeEEEEccceecCCCH------
Confidence 1 45667777444332 2222222211111 11 11110 111345689999999999999996432
Q ss_pred CCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHH
Q 017439 176 SNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYD 255 (371)
Q Consensus 176 ~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~ 255 (371)
..+|+.-.+-|+|||.|+++....+. ...++ +..
T Consensus 140 --------------------------------~~~l~~l~~~LkpgG~l~i~~~~~~~----------~~~~l----~~~ 173 (280)
T d1jqea_ 140 --------------------------------PATLKFFHSLLGTNAKMLIIVVSGSS----------GWDKL----WKK 173 (280)
T ss_dssp --------------------------------HHHHHHHHHTEEEEEEEEEEEECTTS----------HHHHH----HHH
T ss_pred --------------------------------HHHHHHHHhhCCCCCEEEEEEecCcc----------hHHHH----HHH
Confidence 23688888999999999998764321 12222 222
Q ss_pred HHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEE
Q 017439 256 LANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEI 296 (371)
Q Consensus 256 mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~ 296 (371)
+... ... . ....+.+.++++.++++.| |..+.
T Consensus 174 ~~~~-~~~-----~--~~~~~~~~~~~~~~L~~~G-~~~~~ 205 (280)
T d1jqea_ 174 YGSR-FPQ-----D--DLCQYITSDDLTQMLDNLG-LKYEC 205 (280)
T ss_dssp HGGG-SCC-----C--TTSCCCCHHHHHHHHHHHT-CCEEE
T ss_pred HHHh-cCC-----C--cccccCCHHHHHHHHHHCC-CceEE
Confidence 2211 110 0 1122567899999999987 65443
|
| >d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: AD-003 protein-like domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810) species: Leishmania major [TaxId: 5664]
Probab=99.10 E-value=2.6e-10 Score=104.76 Aligned_cols=146 Identities=12% Similarity=0.061 Sum_probs=89.7
Q ss_pred CCCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcc-eeeec
Q 017439 61 TSSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKK-YFATG 139 (371)
Q Consensus 61 ~~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~-~f~~g 139 (371)
..+..+|+|+|||+|..|..++. +.. . +|..-|.-..--...=+.+...+. -|..+
T Consensus 91 ~~~~~~vLD~GcG~G~~t~~ll~---------~~~-------------~-~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~ 147 (254)
T d1xtpa_ 91 GHGTSRALDCGAGIGRITKNLLT---------KLY-------------A-TTDLLEPVKHMLEEAKRELAGMPVGKFILA 147 (254)
T ss_dssp TCCCSEEEEETCTTTHHHHHTHH---------HHC-------------S-EEEEEESCHHHHHHHHHHTTTSSEEEEEES
T ss_pred CCCCCeEEEecccCChhhHHHHh---------hcC-------------c-eEEEEcCCHHHHHhhhccccccccceeEEc
Confidence 35678999999999999987662 110 1 244444433221111111221111 12222
Q ss_pred cCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcc
Q 017439 140 VPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELV 219 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 219 (371)
++.+--++++++|+|+|..++||+ |. .|+..||+.-++-|+
T Consensus 148 ---d~~~~~~~~~~fD~I~~~~vl~hl---~d---------------------------------~d~~~~l~~~~~~Lk 188 (254)
T d1xtpa_ 148 ---SMETATLPPNTYDLIVIQWTAIYL---TD---------------------------------ADFVKFFKHCQQALT 188 (254)
T ss_dssp ---CGGGCCCCSSCEEEEEEESCGGGS---CH---------------------------------HHHHHHHHHHHHHEE
T ss_pred ---cccccccCCCccceEEeecccccc---ch---------------------------------hhhHHHHHHHHHhcC
Confidence 223333578899999999999995 42 456678999999999
Q ss_pred cCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEE
Q 017439 220 PGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNT 299 (371)
Q Consensus 220 pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~ 299 (371)
|||.+++.-........ . .+. .-+..++|.+++++++++.| |+|++.+.
T Consensus 189 pgG~iii~e~~~~~~~~--------~---------------------~d~-~d~~~~rs~~~~~~l~~~aG-f~ii~~~~ 237 (254)
T d1xtpa_ 189 PNGYIFFKENCSTGDRF--------L---------------------VDK-EDSSLTRSDIHYKRLFNESG-VRVVKEAF 237 (254)
T ss_dssp EEEEEEEEEEBC--CCE--------E---------------------EET-TTTEEEBCHHHHHHHHHHHT-CCEEEEEE
T ss_pred CCcEEEEEecCCCCCcc--------e---------------------ecc-cCCceeCCHHHHHHHHHHcC-CEEEEEEe
Confidence 99999986533221110 0 011 11344689999999999987 99877664
|
| >d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: Putative sarcosine dimethylglycine methyltransferase species: Red algae (Galdieria sulphuraria) [TaxId: 130081]
Probab=99.03 E-value=1.9e-08 Score=92.65 Aligned_cols=149 Identities=16% Similarity=0.112 Sum_probs=88.8
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC----CC-Cccee
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV----PL-SKKYF 136 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l----~~-~~~~f 136 (371)
+...+|+|+|||+|..++.+. + ++ ..+|..-|+...- -...+.. .- .+--|
T Consensus 66 ~~~~~vLDiGcG~G~~~~~la--------~-~~--------------~~~v~gvD~s~~~-i~~a~~~~~~~gl~~~v~~ 121 (282)
T d2o57a1 66 QRQAKGLDLGAGYGGAARFLV--------R-KF--------------GVSIDCLNIAPVQ-NKRNEEYNNQAGLADNITV 121 (282)
T ss_dssp CTTCEEEEETCTTSHHHHHHH--------H-HH--------------CCEEEEEESCHHH-HHHHHHHHHHHTCTTTEEE
T ss_pred CCCCEEEEeCCCCcHHHhhhh--------c-cC--------------CcEEEEEeccchh-hhhhhcccccccccccccc
Confidence 345799999999998877665 3 22 1145566654332 1111111 11 12234
Q ss_pred eeccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHh
Q 017439 137 ATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQ 216 (371)
Q Consensus 137 ~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~ 216 (371)
..+. +.+-=+|++++|+|+|..++||+.. ...+|+.-.+
T Consensus 122 ~~~d---~~~l~~~~~sfD~V~~~~~l~h~~d--------------------------------------~~~~l~~~~~ 160 (282)
T d2o57a1 122 KYGS---FLEIPCEDNSYDFIWSQDAFLHSPD--------------------------------------KLKVFQECAR 160 (282)
T ss_dssp EECC---TTSCSSCTTCEEEEEEESCGGGCSC--------------------------------------HHHHHHHHHH
T ss_pred cccc---cccccccccccchhhccchhhhccC--------------------------------------HHHHHHHHHH
Confidence 5444 3332368999999999999998532 1236788888
Q ss_pred hcccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEE
Q 017439 217 ELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEI 296 (371)
Q Consensus 217 EL~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~ 296 (371)
-|+|||+|++......+.... . .+.. .+... ..| ..++.+++++.+++.| |+...
T Consensus 161 ~LkpgG~l~~~~~~~~~~~~~-----~-~~~~---~~~~~--------------~~~-~~~s~~~~~~~l~~~G-f~~i~ 215 (282)
T d2o57a1 161 VLKPRGVMAITDPMKEDGIDK-----S-SIQP---ILDRI--------------KLH-DMGSLGLYRSLAKECG-LVTLR 215 (282)
T ss_dssp HEEEEEEEEEEEEEECTTCCG-----G-GGHH---HHHHH--------------TCS-SCCCHHHHHHHHHHTT-EEEEE
T ss_pred hcCCCcEEEEEEeecCCCCch-----h-HHHH---HHHHh--------------ccC-CCCCHHHHHHHHHHcC-CceEE
Confidence 999999999986544332110 1 1111 11111 112 2468899999999987 88766
Q ss_pred EEEe
Q 017439 297 MNTF 300 (371)
Q Consensus 297 ~e~~ 300 (371)
.+..
T Consensus 216 ~~d~ 219 (282)
T d2o57a1 216 TFSR 219 (282)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 6544
|
| >d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: Methoxy mycolic acid synthase 4, Mma4 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.99 E-value=1.6e-08 Score=94.07 Aligned_cols=160 Identities=11% Similarity=0.086 Sum_probs=94.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhh---hhcCCCC-cceeee
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTL---FKSVPLS-KKYFAT 138 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~l---F~~l~~~-~~~f~~ 138 (371)
..-+|+|+|||.|..++.+. + ++ + .+|.--|+..+-.... .+...-. ...+..
T Consensus 52 ~g~~VLDiGCG~G~~a~~~a--------~-~~----------g----~~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~ 108 (280)
T d2fk8a1 52 PGMTLLDIGCGWGTTMRRAV--------E-RF----------D----VNVIGLTLSKNQHARCEQVLASIDTNRSRQVLL 108 (280)
T ss_dssp TTCEEEEESCTTSHHHHHHH--------H-HH----------C----CEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEE
T ss_pred CCCEEEEecCCchHHHHHHH--------H-hC----------c----eeEEEecchHHHHHHHHHHHHhhccccchhhhh
Confidence 45799999999998887765 2 21 1 1455555555442211 1111111 122333
Q ss_pred ccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 139 GVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 139 gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
.. |. .+++++|.++|..+++. ++. +++..||+.-++-|
T Consensus 109 ~d----~~--~~~~~fD~i~si~~~eh---~~~---------------------------------~~~~~~f~~i~~~L 146 (280)
T d2fk8a1 109 QG----WE--DFAEPVDRIVSIEAFEH---FGH---------------------------------ENYDDFFKRCFNIM 146 (280)
T ss_dssp SC----GG--GCCCCCSEEEEESCGGG---TCG---------------------------------GGHHHHHHHHHHHS
T ss_pred hh----hh--hhccchhhhhHhhHHHH---hhh---------------------------------hhHHHHHHHHHhcc
Confidence 33 22 24678999999999987 342 45677999999999
Q ss_pred ccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCccc-ccCCHHHHHHHhhcCCceEEEEE
Q 017439 219 VPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPM-YYPFLGELMGHIKRNKNFSIEIM 297 (371)
Q Consensus 219 ~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~-Y~ps~eE~~~~i~~~g~F~I~~~ 297 (371)
||||++++...+..+........ . .......- ..+-+..+.+|- +.||.+|+...+++.| |+|...
T Consensus 147 kpgG~~~i~~i~~~~~~~~~~~~-----~--~~~~~~~~-----~~dfI~kyifPgg~lPS~~~l~~~~e~aG-f~v~~~ 213 (280)
T d2fk8a1 147 PADGRMTVQSSVSYHPYEMAARG-----K--KLSFETAR-----FIKFIVTEIFPGGRLPSTEMMVEHGEKAG-FTVPEP 213 (280)
T ss_dssp CTTCEEEEEEEECCCHHHHHTTC-----H--HHHHHHHH-----HHHHHHHHTSTTCCCCCHHHHHHHHHHTT-CBCCCC
T ss_pred CCCceEEEEEeeccCcchhhhcc-----c--cccccccc-----ccchhhhhccCCCcccchHhhhhhHHhhc-ccccee
Confidence 99999999876554321100000 0 00000000 011123455675 5799999999999876 999887
Q ss_pred EEe
Q 017439 298 NTF 300 (371)
Q Consensus 298 e~~ 300 (371)
+.+
T Consensus 214 ~~~ 216 (280)
T d2fk8a1 214 LSL 216 (280)
T ss_dssp EEC
T ss_pred eec
Confidence 755
|
| >d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: AD-003 protein-like domain: Adrenal gland protein AD-003 (C9orf32) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.99 E-value=7.7e-10 Score=98.69 Aligned_cols=145 Identities=14% Similarity=0.076 Sum_probs=94.6
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC---Ccceeee
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL---SKKYFAT 138 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~---~~~~f~~ 138 (371)
.+..+|+|+|||+|.++..++ . + .+ . +|+.-|+-.+--...=+.++. ...-|..
T Consensus 59 ~~~~~vLDiGcG~G~~~~~l~--------~-~----------~~---~-~v~~vD~s~~~l~~ak~~~~~~~~~~~~f~~ 115 (222)
T d2ex4a1 59 TGTSCALDCGAGIGRITKRLL--------L-P----------LF---R-EVDMVDITEDFLVQAKTYLGEEGKRVRNYFC 115 (222)
T ss_dssp CCCSEEEEETCTTTHHHHHTT--------T-T----------TC---S-EEEEEESCHHHHHHHHHHTGGGGGGEEEEEE
T ss_pred CCCCEEEEeccCCCHhhHHHH--------H-h----------cC---C-EEEEeecCHHHhhcccccccccccccccccc
Confidence 456799999999999988765 2 1 11 2 566777665542222111211 1112333
Q ss_pred ccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 139 GVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 139 gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
+++.+--+|++++|+|+|..++|++ |. .|+..+|+.-++-|
T Consensus 116 ---~d~~~~~~~~~~fD~I~~~~~l~h~---~~---------------------------------~~~~~~l~~i~~~L 156 (222)
T d2ex4a1 116 ---CGLQDFTPEPDSYDVIWIQWVIGHL---TD---------------------------------QHLAEFLRRCKGSL 156 (222)
T ss_dssp ---CCGGGCCCCSSCEEEEEEESCGGGS---CH---------------------------------HHHHHHHHHHHHHE
T ss_pred ---ccccccccccccccccccccccccc---hh---------------------------------hhhhhHHHHHHHhc
Confidence 3456655789999999999999995 42 24455788888999
Q ss_pred ccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEE
Q 017439 219 VPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMN 298 (371)
Q Consensus 219 ~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e 298 (371)
+|||.+++......+.... + ..-+.+.++.+++++++++.| |++...+
T Consensus 157 k~~G~~~i~~~~~~~~~~~------------------------------~-~~~~~~~~~~~~~~~l~~~aG-f~ii~~~ 204 (222)
T d2ex4a1 157 RPNGIIVIKDNMAQEGVIL------------------------------D-DVDSSVCRDLDVVRRIICSAG-LSLLAEE 204 (222)
T ss_dssp EEEEEEEEEEEEBSSSEEE------------------------------E-TTTTEEEEBHHHHHHHHHHTT-CCEEEEE
T ss_pred CCcceEEEEEccccccccc------------------------------c-cCCceeeCCHHHHHHHHHHcC-CEEEEEE
Confidence 9999999986433322110 0 011335678999999999987 9988777
Q ss_pred Ee
Q 017439 299 TF 300 (371)
Q Consensus 299 ~~ 300 (371)
..
T Consensus 205 ~q 206 (222)
T d2ex4a1 205 RQ 206 (222)
T ss_dssp EC
T ss_pred Ee
Confidence 53
|
| >d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Plant O-methyltransferase, C-terminal domain domain: Carminomycin 4-O-methyltransferase species: Streptomyces peucetius [TaxId: 1950]
Probab=98.98 E-value=4.9e-09 Score=95.57 Aligned_cols=159 Identities=19% Similarity=0.188 Sum_probs=98.4
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CCCcceeee
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PLSKKYFAT 138 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~~~~~f~~ 138 (371)
.+.-+|+|+|||+|..++.+. + + .| .+++..-|+|. .-...=+.+ ....+ +.
T Consensus 79 ~~~~~VLDvGcG~G~~~~~la--------~-~----------~p---~~~~~~~D~~~-~~~~a~~~~~~~~~~~r--v~ 133 (253)
T d1tw3a2 79 TNVRHVLDVGGGKGGFAAAIA--------R-R----------AP---HVSATVLEMAG-TVDTARSYLKDEGLSDR--VD 133 (253)
T ss_dssp TTCSEEEEETCTTSHHHHHHH--------H-H----------CT---TCEEEEEECTT-HHHHHHHHHHHTTCTTT--EE
T ss_pred ccCCEEEEeCCCCCHHHHHHH--------H-h----------cc---eeEEEEccCHH-HHHHHHHHHHHhhcccc--hh
Confidence 456799999999999988877 3 2 34 56788889874 111111111 11122 23
Q ss_pred ccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 139 GVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 139 gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
-++|+|++. .| .++|+++++++||.+ |. ++...+|+.-++-|
T Consensus 134 ~~~~D~~~~-~~-~~~D~v~~~~vlh~~---~d---------------------------------~~~~~~L~~~~~~L 175 (253)
T d1tw3a2 134 VVEGDFFEP-LP-RKADAIILSFVLLNW---PD---------------------------------HDAVRILTRCAEAL 175 (253)
T ss_dssp EEECCTTSC-CS-SCEEEEEEESCGGGS---CH---------------------------------HHHHHHHHHHHHTE
T ss_pred hccccchhh-cc-cchhheeeccccccC---Cc---------------------------------hhhHHHHHHHHHhc
Confidence 344677763 33 469999999999963 42 23345788888999
Q ss_pred ccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEE
Q 017439 219 VPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMN 298 (371)
Q Consensus 219 ~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e 298 (371)
+|||++++.-....+... ....+..+ -+.-|+.-|- ..||.+|+++++++.| |+++++.
T Consensus 176 kPGG~l~i~e~~~~~~~~-----~~~~~~~~--dl~~~~~~~g-------------~~rt~~e~~~ll~~AG-f~~~~v~ 234 (253)
T d1tw3a2 176 EPGGRILIHERDDLHENS-----FNEQFTEL--DLRMLVFLGG-------------ALRTREKWDGLAASAG-LVVEEVR 234 (253)
T ss_dssp EEEEEEEEEECCBCGGGC-----CSHHHHHH--HHHHHHHHSC-------------CCCBHHHHHHHHHHTT-EEEEEEE
T ss_pred CCCcEEEEEeccCCCCCc-----chhHHHHh--hHHHHhhCCC-------------cCCCHHHHHHHHHHCC-CeEEEEE
Confidence 999999987543222111 01111111 1222222221 2579999999999987 9999998
Q ss_pred EeecCc
Q 017439 299 TFTHPL 304 (371)
Q Consensus 299 ~~~~p~ 304 (371)
.++.|.
T Consensus 235 ~~~~p~ 240 (253)
T d1tw3a2 235 QLPSPT 240 (253)
T ss_dssp EEECSS
T ss_pred ECCCCC
Confidence 886654
|
| >d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Possible histamine N-methyltransferase TM1293 species: Thermotoga maritima [TaxId: 2336]
Probab=98.96 E-value=5.3e-09 Score=91.61 Aligned_cols=90 Identities=17% Similarity=0.126 Sum_probs=61.2
Q ss_pred CCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEe
Q 017439 149 FPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLT 228 (371)
Q Consensus 149 fP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~ 228 (371)
+|++++|+|+|+.+|||+.+ | ..+|+.-++-|+|||+|++..
T Consensus 87 ~~~~~fD~I~~~~~l~h~~d-~-------------------------------------~~~l~~~~~~L~pgG~l~i~~ 128 (208)
T d1vlma_ 87 LKDESFDFALMVTTICFVDD-P-------------------------------------ERALKEAYRILKKGGYLIVGI 128 (208)
T ss_dssp SCTTCEEEEEEESCGGGSSC-H-------------------------------------HHHHHHHHHHEEEEEEEEEEE
T ss_pred cccccccccccccccccccc-c-------------------------------------ccchhhhhhcCCCCceEEEEe
Confidence 68899999999999999643 2 236788888999999999998
Q ss_pred cCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEE
Q 017439 229 PTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNT 299 (371)
Q Consensus 229 ~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~ 299 (371)
+...+. +..+...... ...+.--.+++|.+|+.+++++.| |++..+..
T Consensus 129 ~~~~~~------------------~~~~~~~~~~----~~~~~~~~~~~s~~~l~~~l~~~G-f~~i~v~~ 176 (208)
T d1vlma_ 129 VDRESF------------------LGREYEKNKE----KSVFYKNARFFSTEELMDLMRKAG-FEEFKVVQ 176 (208)
T ss_dssp ECSSSH------------------HHHHHHHTTT----C-CCSTTCCCCCHHHHHHHHHHTT-CEEEEEEE
T ss_pred cCCcch------------------hHHhhhhccc----cccccccccCCCHHHHHHHHHHcC-CeEEEEEE
Confidence 754321 1111111111 112222345789999999999987 98766554
|
| >d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine N-methyltransferase, PNMTase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arylamine N-methyltransferase domain: Phenylethanolamine N-methyltransferase, PNMTase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.96 E-value=8.4e-10 Score=101.51 Aligned_cols=98 Identities=15% Similarity=0.129 Sum_probs=73.6
Q ss_pred CCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc
Q 017439 141 PGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP 220 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 220 (371)
++.+...-++++++|++.|+++|||++..+ .|+..+|+.-++-|||
T Consensus 145 ~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~----------------------------------~~~~~~l~~~~~~LkP 190 (263)
T d2g72a1 145 PQPLGAGSPAPLPADALVSAFCLEAVSPDL----------------------------------ASFQRALDHITTLLRP 190 (263)
T ss_dssp SSTTCSSCSSCSSEEEEEEESCHHHHCSSH----------------------------------HHHHHHHHHHHTTEEE
T ss_pred CCccccCCcCcCccCeeeeHHHHHHHccCH----------------------------------HHHHHHHHHHHHHcCC
Confidence 455555566788999999999999965433 4577789999999999
Q ss_pred CceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEe
Q 017439 221 GGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTF 300 (371)
Q Consensus 221 GG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~ 300 (371)
||.|++...-+.+.. .+..-.++.|+.+.+|+++++++.| |+|+.++..
T Consensus 191 GG~li~~~~~~~~~~------------------------------~~~~~~~~~~~~t~e~v~~~l~~aG-f~v~~~~~~ 239 (263)
T d2g72a1 191 GGHLLLIGALEESWY------------------------------LAGEARLTVVPVSEEEVREALVRSG-YKVRDLRTY 239 (263)
T ss_dssp EEEEEEEEEESCCEE------------------------------EETTEEEECCCCCHHHHHHHHHHTT-EEEEEEEEE
T ss_pred CCEEEEecccCCccc------------------------------ccCCcccccCCCCHHHHHHHHHHCC-CeEEEEEEe
Confidence 999998875432210 0111234667889999999999988 999999887
Q ss_pred ecC
Q 017439 301 THP 303 (371)
Q Consensus 301 ~~p 303 (371)
..+
T Consensus 240 ~~~ 242 (263)
T d2g72a1 240 IMP 242 (263)
T ss_dssp ECC
T ss_pred ecc
Confidence 544
|
| >d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical protein HI0319 (YecO) domain: Hypothetical protein HI0319 (YecO) species: Haemophilus influenzae [TaxId: 727]
Probab=98.95 E-value=1.6e-09 Score=96.70 Aligned_cols=161 Identities=17% Similarity=0.133 Sum_probs=98.4
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CCCcce-eeec
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PLSKKY-FATG 139 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~~~~~-f~~g 139 (371)
.-+|+|+|||+|..|+.+. + ... .| ..+|+.-|+-..--...=+.+ .....+ +..+
T Consensus 40 ~~~vLDlGCGtG~~~~~l~--------~-~~~--------~~---~~~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~ 99 (225)
T d1im8a_ 40 DSNVYDLGCSRGAATLSAR--------R-NIN--------QP---NVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCN 99 (225)
T ss_dssp TCEEEEESCTTCHHHHHHH--------H-TCC--------CS---SCEEEEECSCHHHHHHHHHHHHTSCCSSCEEEECS
T ss_pred CCEEEEeccchhhHHHHHH--------H-hhc--------CC---CCceEEeCCCHHHHHHHHHHhHhhcccchhhhccc
Confidence 4689999999999998877 3 221 34 567888888765433321112 212222 2222
Q ss_pred cCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcc
Q 017439 140 VPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELV 219 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 219 (371)
. + .. +|....|+++|++++||++. +|...+|+.-.+-|+
T Consensus 100 d---~-~~-~~~~~~d~i~~~~~l~~~~~------------------------------------~d~~~~l~~i~~~Lk 138 (225)
T d1im8a_ 100 D---I-RH-VEIKNASMVILNFTLQFLPP------------------------------------EDRIALLTKIYEGLN 138 (225)
T ss_dssp C---T-TT-CCCCSEEEEEEESCGGGSCG------------------------------------GGHHHHHHHHHHHEE
T ss_pred h---h-hc-cccccceeeEEeeeccccCh------------------------------------hhHHHHHHHHHHhCC
Confidence 2 2 12 36678899999999999532 456678999999999
Q ss_pred cCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhc----ccCcccccCCHHHHHHHhhcCCceEE
Q 017439 220 PGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVD----SFNVPMYYPFLGELMGHIKRNKNFSI 294 (371)
Q Consensus 220 pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d----~fn~P~Y~ps~eE~~~~i~~~g~F~I 294 (371)
|||.|++.-..+.+... .-+.+...+..+....-.++.+.. .+..-.+..|.+|++..+++.| |+-
T Consensus 139 pgG~li~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~L~~aG-F~~ 208 (225)
T d1im8a_ 139 PNGVLVLSEKFRFEDTK--------INHLLIDLHHQFKRANGYSELEVSQKRTALENVMRTDSIETHKVRLKNVG-FSQ 208 (225)
T ss_dssp EEEEEEEEEECCCSSHH--------HHHHHHHHHHHHHHHTTGGGSTTHHHHHHHHHHCCCCCHHHHHHHHHHHT-CSE
T ss_pred CCceeecccccccccch--------hhhHHHHHHHHHHHHcCCCHHHHHHHHHHhhcccCCCCHHHHHHHHHHcC-CCc
Confidence 99999997555443211 112333344444333333333322 1122234569999999999987 863
|
| >d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: CmaA2 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.91 E-value=1.6e-07 Score=87.69 Aligned_cols=110 Identities=12% Similarity=0.045 Sum_probs=68.5
Q ss_pred CCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEe
Q 017439 149 FPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLT 228 (371)
Q Consensus 149 fP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~ 228 (371)
+|++++|.|+|.-++.-+...... + -.+.+..||+.-++=|+|||+|++..
T Consensus 122 ~~~~~fD~i~sie~~eH~~~~~~~----------~-------------------~~~~~~~~f~~i~~~LkpgG~~~l~~ 172 (291)
T d1kpia_ 122 EFDEPVDRIVSLGAFEHFADGAGD----------A-------------------GFERYDTFFKKFYNLTPDDGRMLLHT 172 (291)
T ss_dssp GCCCCCSEEEEESCGGGTTCCSSC----------C-------------------STTHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred ccccccceEeechhHHhcchhhhh----------h-------------------HHHHHHHHHHHHHHhCCCCCceEEEE
Confidence 567899999999999553321111 0 12567789999999999999999999
Q ss_pred cCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCccc-ccCCHHHHHHHhhcCCceEEEEEEEe
Q 017439 229 PTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPM-YYPFLGELMGHIKRNKNFSIEIMNTF 300 (371)
Q Consensus 229 ~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~-Y~ps~eE~~~~i~~~g~F~I~~~e~~ 300 (371)
.+.++................. ..+. +..+.+|- +.||.+|+...+++.| |+|++.+.+
T Consensus 173 i~~~~~~~~~~~~~~~p~~~~~--~~~f----------i~kyiFpgg~lps~~~~~~~~e~~g-l~v~~~~~~ 232 (291)
T d1kpia_ 173 ITIPDKEEAQELGLTSPMSLLR--FIKF----------ILTEIFPGGRLPRISQVDYYSSNAG-WKVERYHRI 232 (291)
T ss_dssp EECCCHHHHHHHTCCCCHHHHH--HHHH----------HHHHTCTTCCCCCHHHHHHHHHHHT-CEEEEEEEC
T ss_pred EeccCcchhhhccCCCchhhcc--cchH----------HHHHhcCCCCCCCHHHHHhhhcccc-cccceeeec
Confidence 8765431100000000000000 0000 12233453 5799999999999876 999999876
|
| >d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical protein PH0226 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.90 E-value=3.4e-09 Score=93.03 Aligned_cols=104 Identities=16% Similarity=0.219 Sum_probs=70.2
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC-C--CCcceeeecc
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV-P--LSKKYFATGV 140 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l-~--~~~~~f~~gv 140 (371)
..+|+|+|||+|..|..+. + . -.+|+..|+-.+.. ...+.. . ....-++.+.
T Consensus 38 ~~~ILDiGcG~G~~~~~la--------~-~---------------~~~v~giD~S~~~i-~~ak~~~~~~~~~~~~~~~d 92 (226)
T d1ve3a1 38 RGKVLDLACGVGGFSFLLE--------D-Y---------------GFEVVGVDISEDMI-RKAREYAKSRESNVEFIVGD 92 (226)
T ss_dssp CCEEEEETCTTSHHHHHHH--------H-T---------------TCEEEEEESCHHHH-HHHHHHHHHTTCCCEEEECC
T ss_pred CCEEEEECCCcchhhhhHh--------h-h---------------hcccccccccccch-hhhhhhhccccccccccccc
Confidence 3689999999999887665 2 1 12577777654432 222221 0 1122344444
Q ss_pred CCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc
Q 017439 141 PGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP 220 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 220 (371)
.. +--+|++++|+|+|+.++||+ |. .|+..+|+.-++-|+|
T Consensus 93 ~~---~l~~~~~~fD~I~~~~~l~~~---~~---------------------------------~d~~~~l~~i~~~Lkp 133 (226)
T d1ve3a1 93 AR---KLSFEDKTFDYVIFIDSIVHF---EP---------------------------------LELNQVFKEVRRVLKP 133 (226)
T ss_dssp TT---SCCSCTTCEEEEEEESCGGGC---CH---------------------------------HHHHHHHHHHHHHEEE
T ss_pred cc---cccccCcCceEEEEecchhhC---Ch---------------------------------hHHHHHHHHHHHHcCc
Confidence 22 223688999999999999995 42 4666789999999999
Q ss_pred CceEEEEecCc
Q 017439 221 GGLLLLLTPTI 231 (371)
Q Consensus 221 GG~lvl~~~gr 231 (371)
||++++.+...
T Consensus 134 gG~lii~~~~~ 144 (226)
T d1ve3a1 134 SGKFIMYFTDL 144 (226)
T ss_dssp EEEEEEEEECH
T ss_pred CcEEEEEEcCc
Confidence 99999987643
|
| >d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: CmaA1 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.88 E-value=2.2e-07 Score=86.46 Aligned_cols=101 Identities=14% Similarity=0.162 Sum_probs=62.9
Q ss_pred CCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEecC
Q 017439 151 ESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTPT 230 (371)
Q Consensus 151 ~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~g 230 (371)
++++|-++|..++..+.. +++..||+...+-|+|||+|++...+
T Consensus 125 ~~~fD~i~si~~~eh~~~------------------------------------~~~~~~~~~~~r~LkpgG~~~l~~i~ 168 (285)
T d1kpga_ 125 DEPVDRIVSIGAFEHFGH------------------------------------ERYDAFFSLAHRLLPADGVMLLHTIT 168 (285)
T ss_dssp CCCCSEEEEESCGGGTCT------------------------------------TTHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred cccccceeeehhhhhcCc------------------------------------hhHHHHHHHHHhhcCCCCcEEEEEEe
Confidence 467899999998887322 34556899999999999999998877
Q ss_pred cCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCccc-ccCCHHHHHHHhhcCCceEEEEEEEe
Q 017439 231 IRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPM-YYPFLGELMGHIKRNKNFSIEIMNTF 300 (371)
Q Consensus 231 r~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~-Y~ps~eE~~~~i~~~g~F~I~~~e~~ 300 (371)
...............++ ...... -+....+|- ..||.+|+...++..| |+|+..+.+
T Consensus 169 ~~~~~~~~~~~~~~~~~-~~~~~~-----------fi~kyiFpgg~lPsl~~~~~~~e~ag-f~v~~~~~~ 226 (285)
T d1kpga_ 169 GLHPKEIHERGLPMSFT-FARFLK-----------FIVTEIFPGGRLPSIPMVQECASANG-FTVTRVQSL 226 (285)
T ss_dssp ECCHHHHTTTTCSCHHH-HHHHHH-----------HHHHHTSTTCCCCCHHHHHHHHHTTT-CEEEEEEEC
T ss_pred ccCchhhccccCCcchh-hhchhh-----------HHHHHhccCCCCCChhhHHHHHHHhc-hhhcccccc
Confidence 43211000000000111 111111 112222332 4789999999999876 999888765
|
| >d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical Protein YjhP domain: Hypothetical Protein YjhP species: Escherichia coli [TaxId: 562]
Probab=98.86 E-value=7.6e-09 Score=93.32 Aligned_cols=147 Identities=16% Similarity=0.073 Sum_probs=93.2
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchh---hhhhcCCC-Ccceeeec
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFN---TLFKSVPL-SKKYFATG 139 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn---~lF~~l~~-~~~~f~~g 139 (371)
.-+|+|+|||+|..+..+. + ++ ...|+--|+-..-.. ........ ++--|..+
T Consensus 34 g~~VLDiGCG~G~~~~~la--------~-~~--------------~~~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~ 90 (245)
T d1nkva_ 34 GTRILDLGSGSGEMLCTWA--------R-DH--------------GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHN 90 (245)
T ss_dssp TCEEEEETCTTCHHHHHHH--------H-HT--------------CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES
T ss_pred CCEEEEEcCCCCHHHHHHH--------H-hc--------------CCEEEEEecccchhhHHHHHHHHhhccccchhhhh
Confidence 4689999999998777554 2 21 124666676443321 12222221 22346666
Q ss_pred cCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcc
Q 017439 140 VPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELV 219 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 219 (371)
. ...++|++++|+++|..++||+...+ .+|+.-.+-|+
T Consensus 91 d----~~~~~~~~~fD~v~~~~~~~~~~d~~--------------------------------------~~l~~~~r~Lk 128 (245)
T d1nkva_ 91 D----AAGYVANEKCDVAACVGATWIAGGFA--------------------------------------GAEELLAQSLK 128 (245)
T ss_dssp C----CTTCCCSSCEEEEEEESCGGGTSSSH--------------------------------------HHHHHHTTSEE
T ss_pred H----HhhccccCceeEEEEEehhhccCCHH--------------------------------------HHHHHHHHHcC
Confidence 5 45568999999999999999965433 26888889999
Q ss_pred cCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEE
Q 017439 220 PGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNT 299 (371)
Q Consensus 220 pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~ 299 (371)
|||++++...+...... .+.+...|. ..-+.-+.+..++...+++.| |++.....
T Consensus 129 PGG~l~i~~~~~~~~~~---------~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~aG-~~~v~~~~ 183 (245)
T d1nkva_ 129 PGGIMLIGEPYWRQLPA---------TEEIAQACG---------------VSSTSDFLTLPGLVGAFDDLG-YDVVEMVL 183 (245)
T ss_dssp EEEEEEEEEEEETTCCS---------SHHHHHTTT---------------CSCGGGSCCHHHHHHHHHTTT-BCCCEEEE
T ss_pred cCcEEEEEeccccCCCC---------hHHHHHHhc---------------cCCCcccCCHHHHHHHHHHcC-CEEEEEEe
Confidence 99999998876544321 112222221 011222568889999999987 88776654
Q ss_pred e
Q 017439 300 F 300 (371)
Q Consensus 300 ~ 300 (371)
.
T Consensus 184 ~ 184 (245)
T d1nkva_ 184 A 184 (245)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein ECA1738 species: Erwinia carotovora [TaxId: 554]
Probab=98.79 E-value=8.9e-08 Score=85.15 Aligned_cols=152 Identities=13% Similarity=0.099 Sum_probs=87.8
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCCC
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPGS 143 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpgS 143 (371)
.-+|+|+|||+|..+..+. + + + . .|+.-|+-.+ .-...+.-...+--|..+.
T Consensus 21 ~~~VLDiGcG~G~~~~~l~--------~-~----g------~-----~v~giD~s~~-~i~~a~~~~~~~~~~~~~~--- 72 (225)
T d2p7ia1 21 PGNLLELGSFKGDFTSRLQ--------E-H----F------N-----DITCVEASEE-AISHAQGRLKDGITYIHSR--- 72 (225)
T ss_dssp SSCEEEESCTTSHHHHHHT--------T-T----C------S-----CEEEEESCHH-HHHHHHHHSCSCEEEEESC---
T ss_pred CCcEEEEeCCCcHHHHHHH--------H-c----C------C-----eEEEEeCcHH-Hhhhhhccccccccccccc---
Confidence 3479999999999987655 2 1 0 1 3555564322 2223232212222344443
Q ss_pred cccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHH-HHhhcccCc
Q 017439 144 FHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNA-RAQELVPGG 222 (371)
Q Consensus 144 Fy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~-Ra~EL~pGG 222 (371)
.+.+.+++++|+|++...|||+.. |. .+|+. +.+=|+|||
T Consensus 73 -~~~~~~~~~fD~I~~~~vleh~~d-~~-------------------------------------~~l~~i~~~~Lk~gG 113 (225)
T d2p7ia1 73 -FEDAQLPRRYDNIVLTHVLEHIDD-PV-------------------------------------ALLKRINDDWLAEGG 113 (225)
T ss_dssp -GGGCCCSSCEEEEEEESCGGGCSS-HH-------------------------------------HHHHHHHHTTEEEEE
T ss_pred -ccccccccccccccccceeEecCC-HH-------------------------------------HHHHHHHHHhcCCCc
Confidence 344567899999999999999754 21 13444 336799999
Q ss_pred eEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhh----cccCcccccCCHHHHHHHhhcCCceEEEEEE
Q 017439 223 LLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKV----DSFNVPMYYPFLGELMGHIKRNKNFSIEIMN 298 (371)
Q Consensus 223 ~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~----d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e 298 (371)
.+++.++-... ++..+. . ..|.+..... +-..--....+.++++..+++.| |+|++.+
T Consensus 114 ~l~i~~pn~~~-----------~~~~~~-~-----~~~~~~~~~~~~~~~~~~~h~~~~~~~~l~~~l~~~G-f~i~~~~ 175 (225)
T d2p7ia1 114 RLFLVCPNANA-----------VSRQIA-V-----KMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAG-LQVTYRS 175 (225)
T ss_dssp EEEEEEECTTC-----------HHHHHH-H-----HTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTT-CEEEEEE
T ss_pred eEEEEeCCccc-----------HHHHHH-H-----HhhhhhhhhhcCccccceeeeeccCHHHHHHHHHHCC-CEEEEEE
Confidence 99999864321 111111 1 1122221110 10111122448999999999987 9999888
Q ss_pred Ee
Q 017439 299 TF 300 (371)
Q Consensus 299 ~~ 300 (371)
.+
T Consensus 176 ~~ 177 (225)
T d2p7ia1 176 GI 177 (225)
T ss_dssp EE
T ss_pred EE
Confidence 65
|
| >d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.79 E-value=1.1e-07 Score=84.97 Aligned_cols=82 Identities=12% Similarity=0.039 Sum_probs=61.8
Q ss_pred cCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEE
Q 017439 148 LFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLL 227 (371)
Q Consensus 148 LfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~ 227 (371)
-.+.+++|++++..++|.+ |+ .+...+++.-++-|+|||++++.
T Consensus 124 ~~~~~~fd~i~~~~~l~~~---~~---------------------------------~~r~~~~~~~~~~LkpgG~~~l~ 167 (229)
T d2bzga1 124 RTNIGKFDMIWDRGALVAI---NP---------------------------------GDRKCYADTMFSLLGKKFQYLLC 167 (229)
T ss_dssp GSCCCCEEEEEESSSTTTS---CG---------------------------------GGHHHHHHHHHHTEEEEEEEEEE
T ss_pred ccccCceeEEEEEEEEEec---cc---------------------------------hhhHHHHHHHHhhcCCcceEEEE
Confidence 3577899999999999995 32 23445677888999999999988
Q ss_pred ecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEee
Q 017439 228 TPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFT 301 (371)
Q Consensus 228 ~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~~ 301 (371)
....+.... .-|.|..+.+|++.++.. .|+|+.+|..+
T Consensus 168 ~~~~~~~~~----------------------------------~gpp~~~~~~el~~lf~~--~~~i~~le~~~ 205 (229)
T d2bzga1 168 VLSYDPTKH----------------------------------PGPPFYVPHAEIERLFGK--ICNIRCLEKVD 205 (229)
T ss_dssp EEECCTTTC----------------------------------CCSSCCCCHHHHHHHHTT--TEEEEEEEEEE
T ss_pred EcccCCCCC----------------------------------CCCCCCCCHHHHHHHhcC--CCEEEEEEEec
Confidence 876543211 115567799999999975 59998888764
|
| >d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Pseudomonas syringae [TaxId: 317]
Probab=98.77 E-value=1.5e-08 Score=86.59 Aligned_cols=79 Identities=13% Similarity=0.035 Sum_probs=59.2
Q ss_pred CCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEec
Q 017439 150 PESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTP 229 (371)
Q Consensus 150 P~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~ 229 (371)
+..++|+++|+.++|++ +. .++..+++.-++-|+|||++++...
T Consensus 96 ~~~~~D~i~~~~~l~~l---~~---------------------------------~~~~~~~~~i~~~LkpgG~l~l~~~ 139 (201)
T d1pjza_ 96 DIGHCAAFYDRAAMIAL---PA---------------------------------DMRERYVQHLEALMPQACSGLLITL 139 (201)
T ss_dssp HHHSEEEEEEESCGGGS---CH---------------------------------HHHHHHHHHHHHHSCSEEEEEEEEE
T ss_pred cccceeEEEEEeeeEec---ch---------------------------------hhhHHHHHHHHHhcCCCcEEEEEEc
Confidence 45789999999999994 42 3455678888999999999988876
Q ss_pred CcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEe
Q 017439 230 TIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTF 300 (371)
Q Consensus 230 gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~ 300 (371)
......+ .-|.|..+.+|+++++.. .|+|+.++..
T Consensus 140 ~~~~~~~----------------------------------~~p~~~~~~~el~~l~~~--~~~i~~~~~~ 174 (201)
T d1pjza_ 140 EYDQALL----------------------------------EGPPFSVPQTWLHRVMSG--NWEVTKVGGQ 174 (201)
T ss_dssp SSCSSSS----------------------------------SSCCCCCCHHHHHHTSCS--SEEEEEEEES
T ss_pred ccccccC----------------------------------CCccccCCHHHHHHHhCC--CcEEEEEEEe
Confidence 5543211 125667789999998864 5898887755
|
| >d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Plant O-methyltransferase, C-terminal domain domain: Aclacinomycin-10-hydroxylase RdmB species: Streptomyces purpurascens [TaxId: 1924]
Probab=98.67 E-value=6.1e-08 Score=88.59 Aligned_cols=156 Identities=22% Similarity=0.258 Sum_probs=95.0
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCc--hhhhhhcCCCCcceeeec
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNND--FNTLFKSVPLSKKYFATG 139 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~ND--Fn~lF~~l~~~~~~f~~g 139 (371)
+..-+|+|+|||+|..+..+. + + .| .++++.-|+|..- ....+........ +.-
T Consensus 80 ~~~~~vlDvG~G~G~~~~~l~--------~-~----------~P---~~~~~~~Dlp~~~~~a~~~~~~~~~~~r--i~~ 135 (256)
T d1qzza2 80 SAVRHVLDVGGGNGGMLAAIA--------L-R----------AP---HLRGTLVELAGPAERARRRFADAGLADR--VTV 135 (256)
T ss_dssp TTCCEEEEETCTTSHHHHHHH--------H-H----------CT---TCEEEEEECHHHHHHHHHHHHHTTCTTT--EEE
T ss_pred ccCCEEEEECCCCCHHHHHHH--------H-h----------hc---CcEEEEecChHHHHHHHHHHhhcCCcce--eee
Confidence 345689999999998888776 3 2 34 5678888998521 1112222222222 223
Q ss_pred cCCCcccccCCCCceeEEEecCCcc-ccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 140 VPGSFHGRLFPESSLHVAHTSNALP-WLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~alH-WLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
++|.|+..+ | .+.|++++.+.|| | |+ ++...+|+.-++-|
T Consensus 136 ~~~d~~~~~-p-~~~D~v~~~~vLh~~----~d---------------------------------~~~~~lL~~i~~~L 176 (256)
T d1qzza2 136 AEGDFFKPL-P-VTADVVLLSFVLLNW----SD---------------------------------EDALTILRGCVRAL 176 (256)
T ss_dssp EECCTTSCC-S-CCEEEEEEESCGGGS----CH---------------------------------HHHHHHHHHHHHHE
T ss_pred eeeeccccc-c-ccchhhhcccccccc----Cc---------------------------------HHHHHHHHHHHhhc
Confidence 456777643 4 4589999999998 5 32 34455788889999
Q ss_pred ccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEE
Q 017439 219 VPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMN 298 (371)
Q Consensus 219 ~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e 298 (371)
+|||++++.=.-..+.+. ....+..+.+ +.-|+.-| -..+|.+|+++++++.| |++++..
T Consensus 177 kpgG~llI~d~~~~~~~~-----~~~~~~~~~d-~~ml~~~~-------------g~~rt~~e~~~ll~~AG-f~~~~~~ 236 (256)
T d1qzza2 177 EPGGRLLVLDRADVEGDG-----ADRFFSTLLD-LRMLTFMG-------------GRVRTRDEVVDLAGSAG-LALASER 236 (256)
T ss_dssp EEEEEEEEEECCH------------HHHHHHHH-HHHHHHHS-------------CCCCCHHHHHHHHHTTT-EEEEEEE
T ss_pred CCcceeEEEEeccCCCCc-----ccHHHHHHHH-HHHHhhCC-------------CccCCHHHHHHHHHHCC-CceeEEE
Confidence 999999986432222111 1111121111 11122222 12579999999999987 9998887
Q ss_pred Ee
Q 017439 299 TF 300 (371)
Q Consensus 299 ~~ 300 (371)
..
T Consensus 237 ~~ 238 (256)
T d1qzza2 237 TS 238 (256)
T ss_dssp EE
T ss_pred Ee
Confidence 65
|
| >d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TehB-like domain: Putative methyltransferase TehB species: Salmonella typhimurium [TaxId: 90371]
Probab=98.64 E-value=5.1e-08 Score=84.99 Aligned_cols=104 Identities=16% Similarity=0.201 Sum_probs=68.4
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CCCcceeeecc
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PLSKKYFATGV 140 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~~~~~f~~gv 140 (371)
+-+|+|+|||+|.+++.+.+ + -.+|+..|+..+--..+=+.. .-..-.+..+.
T Consensus 31 ~grvLDiGcG~G~~~~~la~---------~---------------g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d 86 (198)
T d2i6ga1 31 PGRTLDLGCGNGRNSLYLAA---------N---------------GYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVD 86 (198)
T ss_dssp SCEEEEETCTTSHHHHHHHH---------T---------------TCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECC
T ss_pred CCcEEEECCCCCHHHHHHHH---------H---------------hhhhccccCcHHHHHHHHHHhhhccccchhhhhee
Confidence 34899999999999997762 1 113555555544433221111 10111233333
Q ss_pred CCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc
Q 017439 141 PGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP 220 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 220 (371)
..++.|++++|+++|+.++|++ |. .++..+|+.-++-|+|
T Consensus 87 ----~~~~~~~~~fD~I~~~~~~~~~---~~---------------------------------~~~~~~l~~~~~~L~p 126 (198)
T d2i6ga1 87 ----LNTLTFDGEYDFILSTVVMMFL---EA---------------------------------QTIPGLIANMQRCTKP 126 (198)
T ss_dssp ----TTTCCCCCCEEEEEEESCGGGS---CT---------------------------------THHHHHHHHHHHTEEE
T ss_pred ----cccccccccccEEEEeeeeecC---CH---------------------------------HHHHHHHHHHHHHcCC
Confidence 4555678999999999999994 43 3455689999999999
Q ss_pred CceEEEEecCc
Q 017439 221 GGLLLLLTPTI 231 (371)
Q Consensus 221 GG~lvl~~~gr 231 (371)
||++++.....
T Consensus 127 gG~~~~~~~~~ 137 (198)
T d2i6ga1 127 GGYNLIVAAMD 137 (198)
T ss_dssp EEEEEEEEEBC
T ss_pred CcEEEEEEecC
Confidence 99999977654
|
| >d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: mRNA cap (Guanine N-7) methyltransferase domain: mRNA cap (Guanine N-7) methyltransferase species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]
Probab=98.56 E-value=1.5e-07 Score=85.01 Aligned_cols=109 Identities=16% Similarity=0.240 Sum_probs=69.6
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhh---cCCCC-cceeee
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFK---SVPLS-KKYFAT 138 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~---~l~~~-~~~f~~ 138 (371)
+.-+|+|+|||+|..+..+... . . . +|+.-|+-.+--...-+ .+... +-.|..
T Consensus 24 ~~~~VLDlGCG~G~~~~~~~~~--------~----------~----~-~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~ 80 (252)
T d1ri5a_ 24 RGDSVLDLGCGKGGDLLKYERA--------G----------I----G-EYYGVDIAEVSINDARVRARNMKRRFKVFFRA 80 (252)
T ss_dssp TTCEEEEETCTTTTTHHHHHHH--------T----------C----S-EEEEEESCHHHHHHHHHHHHTSCCSSEEEEEE
T ss_pred CcCEEEEecccCcHHHHHHHHc--------C----------C----C-eEEEecCCHHHHHHHHHHHHhcCCCcceEEEE
Confidence 3468999999999988776621 0 0 1 35555655543322211 11111 122333
Q ss_pred ccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 139 GVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 139 gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
+. .+-..+.+.+++|+|+|..++||+-.. .+|+..+|+.-++-|
T Consensus 81 ~D--~~~~~~~~~~~fD~V~~~~~l~~~~~~----------------------------------~~~~~~~l~~i~~~L 124 (252)
T d1ri5a_ 81 QD--SYGRHMDLGKEFDVISSQFSFHYAFST----------------------------------SESLDIAQRNIARHL 124 (252)
T ss_dssp SC--TTTSCCCCSSCEEEEEEESCGGGGGSS----------------------------------HHHHHHHHHHHHHTE
T ss_pred cc--hhhhcccccccceEEEEcceeeecCCC----------------------------------HHHHHHHHHHHhcee
Confidence 32 122233467899999999999995432 267788999999999
Q ss_pred ccCceEEEEecC
Q 017439 219 VPGGLLLLLTPT 230 (371)
Q Consensus 219 ~pGG~lvl~~~g 230 (371)
+|||+|+++++.
T Consensus 125 k~gG~~i~~~~~ 136 (252)
T d1ri5a_ 125 RPGGYFIMTVPS 136 (252)
T ss_dssp EEEEEEEEEEEC
T ss_pred CCCCEEEEEecC
Confidence 999999998753
|
| >d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Putative methyltransferase CAC2371 species: Clostridium acetobutylicum [TaxId: 1488]
Probab=98.55 E-value=1.3e-07 Score=84.76 Aligned_cols=106 Identities=16% Similarity=0.147 Sum_probs=68.0
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC--CCcceeeec
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP--LSKKYFATG 139 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~--~~~~~f~~g 139 (371)
.++-+|+|+|||+|..|+.+. + + -.+|+.-|+-.+--...-+..+ ..+--|..+
T Consensus 36 ~~~~~vLDiGCG~G~~~~~l~--------~-~---------------g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~ 91 (246)
T d1y8ca_ 36 LVFDDYLDLACGTGNLTENLC--------P-K---------------FKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQ 91 (246)
T ss_dssp CCTTEEEEETCTTSTTHHHHG--------G-G---------------SSEEEEECSCHHHHHHHHHHHHHTTCCCEEECC
T ss_pred CCCCeEEEEeCcCCHHHHHHH--------H-h---------------CCccEeeccchhhhhhccccccccCccceeecc
Confidence 345689999999999988776 2 1 1145666665543322222111 111224444
Q ss_pred cCCCcccccCCCCceeEEEec-CCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 140 VPGSFHGRLFPESSLHVAHTS-NALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss-~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
. ...+-+++++|+|+|. .+++|+.. .+|+..+|+.-++-|
T Consensus 92 d----~~~~~~~~~fD~i~~~~~~~~~~~~-----------------------------------~~~~~~~l~~~~~~L 132 (246)
T d1y8ca_ 92 D----ISNLNINRKFDLITCCLDSTNYIID-----------------------------------SDDLKKYFKAVSNHL 132 (246)
T ss_dssp C----GGGCCCSCCEEEEEECTTGGGGCCS-----------------------------------HHHHHHHHHHHHTTE
T ss_pred c----hhhhcccccccccceeeeeeeccCC-----------------------------------HHHHHHHHHHHHHhC
Confidence 3 2233457799999986 67787433 257778999999999
Q ss_pred ccCceEEEEecC
Q 017439 219 VPGGLLLLLTPT 230 (371)
Q Consensus 219 ~pGG~lvl~~~g 230 (371)
+|||.|++.+..
T Consensus 133 kpgG~~i~~~~~ 144 (246)
T d1y8ca_ 133 KEGGVFIFDINS 144 (246)
T ss_dssp EEEEEEEEEEEC
T ss_pred CCCeEEEEEeCC
Confidence 999999987643
|
| >d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical methyltransferase PH1305 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.52 E-value=4.3e-07 Score=80.99 Aligned_cols=105 Identities=17% Similarity=0.255 Sum_probs=68.4
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC--Ccceeeec
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL--SKKYFATG 139 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~--~~~~f~~g 139 (371)
.+.-+|+|+|||+|..|+.+.+ . -.+|+..|+-.+--...=+..+. .+--|..|
T Consensus 40 ~~~~~iLDiGcGtG~~~~~l~~-------~-----------------~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~ 95 (251)
T d1wzna1 40 REVRRVLDLACGTGIPTLELAE-------R-----------------GYEVVGLDLHEEMLRVARRKAKERNLKIEFLQG 95 (251)
T ss_dssp SCCCEEEEETCTTCHHHHHHHH-------T-----------------TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEES
T ss_pred CCCCEEEEeCCCCCccchhhcc-------c-----------------ceEEEEEeeccccccccccccccccccchheeh
Confidence 3456999999999999887662 1 11455556655332221111111 12234444
Q ss_pred cCCCcccccCCCCceeEEEec-CCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 140 VPGSFHGRLFPESSLHVAHTS-NALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss-~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
. ...|-+++++|+|+|. .++||++. +|+..+|+.-++-|
T Consensus 96 d----~~~l~~~~~fD~I~~~~~~~~~~~~------------------------------------~~~~~~L~~~~~~L 135 (251)
T d1wzna1 96 D----VLEIAFKNEFDAVTMFFSTIMYFDE------------------------------------EDLRKLFSKVAEAL 135 (251)
T ss_dssp C----GGGCCCCSCEEEEEECSSGGGGSCH------------------------------------HHHHHHHHHHHHHE
T ss_pred h----hhhcccccccchHhhhhhhhhcCCh------------------------------------HHHHHHHHHHHHHc
Confidence 4 4556667899999996 57888531 35667899999999
Q ss_pred ccCceEEEEecC
Q 017439 219 VPGGLLLLLTPT 230 (371)
Q Consensus 219 ~pGG~lvl~~~g 230 (371)
+|||++++.+..
T Consensus 136 kpgG~lii~~~~ 147 (251)
T d1wzna1 136 KPGGVFITDFPC 147 (251)
T ss_dssp EEEEEEEEEEEC
T ss_pred CCCcEEEEEecc
Confidence 999999998754
|
| >d1fp1d2 c.66.1.12 (D:129-372) Chalcone O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Plant O-methyltransferase, C-terminal domain domain: Chalcone O-methyltransferase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=98.51 E-value=9e-07 Score=80.40 Aligned_cols=148 Identities=16% Similarity=0.138 Sum_probs=95.7
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccC
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVP 141 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvp 141 (371)
++.-+|+|+|||+|..++.++ + + .| .++++.-|||. ....-....+ +..++
T Consensus 80 ~~~~~vlDiGGG~G~~~~~l~--------~-~----------~P---~l~~~v~Dlp~-----vi~~~~~~~r--i~~~~ 130 (244)
T d1fp1d2 80 EGISTLVDVGGGSGRNLELII--------S-K----------YP---LIKGINFDLPQ-----VIENAPPLSG--IEHVG 130 (244)
T ss_dssp TTCSEEEEETCTTSHHHHHHH--------H-H----------CT---TCEEEEEECHH-----HHTTCCCCTT--EEEEE
T ss_pred cCCcEEEEecCCCcHHHHHHH--------H-H----------CC---CCeEEEecchh-----hhhccCCCCC--eEEec
Confidence 456799999999999888877 3 2 45 67888889985 2222222222 33467
Q ss_pred CCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccC
Q 017439 142 GSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPG 221 (371)
Q Consensus 142 gSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 221 (371)
|+|++.+ |.. |+++.++.||.. |+ ++-.+.|+.-++-|+||
T Consensus 131 gd~~~~~-p~~--D~~~l~~vLh~~---~d---------------------------------e~~~~iL~~~~~aL~pg 171 (244)
T d1fp1d2 131 GDMFASV-PQG--DAMILKAVCHNW---SD---------------------------------EKCIEFLSNCHKALSPN 171 (244)
T ss_dssp CCTTTCC-CCE--EEEEEESSGGGS---CH---------------------------------HHHHHHHHHHHHHEEEE
T ss_pred CCccccc-ccc--eEEEEehhhhhC---CH---------------------------------HHHHHHHHHHHHHcCCC
Confidence 8898764 543 999999999952 42 23345788889999999
Q ss_pred ceEEEEecCcCCCCCCCCCCCcchHHHHHHHH--HHHHH-cCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEE
Q 017439 222 GLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCL--YDLAN-MGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMN 298 (371)
Q Consensus 222 G~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al--~~mv~-eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e 298 (371)
|++++.=.-.++... ......+...+ .-|+. .|. .||.+|+++++++.| |+..++.
T Consensus 172 g~llI~e~v~~~~~~------~~~~~~~~~~~d~~m~~~~~g~--------------ert~~e~~~ll~~AG-F~~v~v~ 230 (244)
T d1fp1d2 172 GKVIIVEFILPEEPN------TSEESKLVSTLDNLMFITVGGR--------------ERTEKQYEKLSKLSG-FSKFQVA 230 (244)
T ss_dssp EEEEEEEEEECSSCC------SSHHHHHHHHHHHHHHHHHSCC--------------CEEHHHHHHHHHHTT-CSEEEEE
T ss_pred cEEEEEEEEecCCCC------CchHHHHHHHHHHHHHhhCCCc--------------CCCHHHHHHHHHHcC-CCceEEE
Confidence 999887655443211 00111111111 11222 232 478999999999988 9876654
|
| >d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: BC2162-like domain: Methyltransferase BC2162 species: Bacillus cereus [TaxId: 1396]
Probab=98.35 E-value=3.2e-07 Score=84.59 Aligned_cols=106 Identities=19% Similarity=0.291 Sum_probs=69.1
Q ss_pred CCCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhh---hhhcCCCCcceee
Q 017439 61 TSSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNT---LFKSVPLSKKYFA 137 (371)
Q Consensus 61 ~~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~---lF~~l~~~~~~f~ 137 (371)
..++.+|+|+|||+|..+..+. + .+. + ...|+.-|+..+--.. .++..+. +.-|.
T Consensus 25 ~~~~~~ILDiGcG~G~~~~~la--------~-~~~---------~---~~~v~giD~s~~~l~~a~~~~~~~~~-~~~f~ 82 (281)
T d2gh1a1 25 ITKPVHIVDYGCGYGYLGLVLM--------P-LLP---------E---GSKYTGIDSGETLLAEARELFRLLPY-DSEFL 82 (281)
T ss_dssp CCSCCEEEEETCTTTHHHHHHT--------T-TSC---------T---TCEEEEEECCHHHHHHHHHHHHSSSS-EEEEE
T ss_pred cCCcCEEEEecCcCCHHHHHHH--------H-hCC---------C---CCEEEEEecchhHhhhhhcccccccc-ccccc
Confidence 3567999999999998887665 2 221 1 1356677765443222 2222221 22355
Q ss_pred eccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 138 TGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 138 ~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
.+. ...+-+++++|+|+|+.++||+.. | ..+|+.-.+-
T Consensus 83 ~~d----~~~~~~~~~fD~v~~~~~l~~~~d-~-------------------------------------~~~l~~~~~~ 120 (281)
T d2gh1a1 83 EGD----ATEIELNDKYDIAICHAFLLHMTT-P-------------------------------------ETMLQKMIHS 120 (281)
T ss_dssp ESC----TTTCCCSSCEEEEEEESCGGGCSS-H-------------------------------------HHHHHHHHHT
T ss_pred ccc----cccccccCCceEEEEehhhhcCCC-H-------------------------------------HHHHHHHHHH
Confidence 544 334545678999999999999654 2 1257777889
Q ss_pred cccCceEEEEecC
Q 017439 218 LVPGGLLLLLTPT 230 (371)
Q Consensus 218 L~pGG~lvl~~~g 230 (371)
|||||++++.-+.
T Consensus 121 LkpgG~lii~~~~ 133 (281)
T d2gh1a1 121 VKKGGKIICFEPH 133 (281)
T ss_dssp EEEEEEEEEEECC
T ss_pred cCcCcEEEEEECC
Confidence 9999999987753
|
| >d1kyza2 c.66.1.12 (A:120-362) Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Plant O-methyltransferase, C-terminal domain domain: Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=98.35 E-value=7.2e-06 Score=73.93 Aligned_cols=151 Identities=15% Similarity=0.097 Sum_probs=92.0
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccC
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVP 141 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvp 141 (371)
.+.-+|+|+|||+|..++.++ + + .| .+++..-|||.- ........+ +..++
T Consensus 80 ~~~~~vvDvGGG~G~~~~~l~--------~-~----------~P---~l~~~v~Dlp~v-----i~~~~~~~r--~~~~~ 130 (243)
T d1kyza2 80 EGLKSLVDVGGGTGAVINTIV--------S-K----------YP---TIKGINFDLPHV-----IEDAPSYPG--VEHVG 130 (243)
T ss_dssp SSCSEEEEETCTTSHHHHHHH--------H-H----------CT---TSEEEEEECTTT-----TTTCCCCTT--EEEEE
T ss_pred cCCcEEEEecCCCcHHHHHHH--------H-H----------CC---CCeEEEcccHHh-----hhhcccCCc--eEEec
Confidence 345689999999999998887 4 3 44 567888999963 121111112 44567
Q ss_pred CCcccccCCCCceeEEEecCCcc-ccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc
Q 017439 142 GSFHGRLFPESSLHVAHTSNALP-WLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP 220 (371)
Q Consensus 142 gSFy~rLfP~~Svd~~~Ss~alH-WLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 220 (371)
|.|++.+ |.. |+.+-.+.|| | |. +|...+|+.-++-|+|
T Consensus 131 ~d~~~~~-P~a--d~~~l~~vlh~~----~d---------------------------------~~~~~iL~~~~~al~p 170 (243)
T d1kyza2 131 GDMFVSI-PKA--DAVFMKWICHDW----SD---------------------------------EHCLKFLKNCYEALPD 170 (243)
T ss_dssp CCTTTCC-CCC--SCEECSSSSTTS----CH---------------------------------HHHHHHHHHHHHHCCS
T ss_pred ccccccC-CCc--ceEEEEEEeecC----CH---------------------------------HHHHHHHHHHHHhcCC
Confidence 7888764 654 4445555555 5 32 4555689999999999
Q ss_pred CceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHH--cCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEE
Q 017439 221 GGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLAN--MGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMN 298 (371)
Q Consensus 221 GG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~--eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e 298 (371)
||++++.=.-.++.... ... ....+...+.-|+. .|. .||.+|+++++++.| |+..++.
T Consensus 171 gg~~li~d~~~~~~~~~---~~~-~~~~~~~d~~ml~~~~~g~--------------ert~~e~~~ll~~AG-f~~vkv~ 231 (243)
T d1kyza2 171 NGKVIVAECILPVAPDS---SLA-TKGVVHIDVIMLAHNPGGK--------------ERTQKEFEDLAKGAG-FQGFKVH 231 (243)
T ss_dssp SSCEEEEECEECSSCCC---CHH-HHHHHHHHHHHHHHCSSCC--------------CEEHHHHHHHHHHHC-CSCEEEE
T ss_pred CceEEEEEEEecCCCCC---chh-hHHHHHHHHHHHhhCCCCC--------------cCCHHHHHHHHHHcC-CCcEEEE
Confidence 99998875433222110 000 01111111222332 232 578999999999987 9877765
Q ss_pred Ee
Q 017439 299 TF 300 (371)
Q Consensus 299 ~~ 300 (371)
..
T Consensus 232 ~~ 233 (243)
T d1kyza2 232 CN 233 (243)
T ss_dssp EE
T ss_pred Ee
Confidence 33
|
| >d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: rRNA methyltransferase RlmA domain: rRNA methyltransferase RlmA species: Escherichia coli [TaxId: 562]
Probab=98.34 E-value=8.4e-07 Score=81.20 Aligned_cols=78 Identities=22% Similarity=0.212 Sum_probs=49.7
Q ss_pred CCCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeecc
Q 017439 61 TSSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGV 140 (371)
Q Consensus 61 ~~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gv 140 (371)
..+..+|+|+|||+|..+..+. + . .| ..+++-.|+-..-=...-+..+ +-.|..|.
T Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~--------~-~----------~~---~~~~~giD~s~~~~~~a~~~~~--~~~~~~~d 137 (268)
T d1p91a_ 82 DDKATAVLDIGCGEGYYTHAFA--------D-A----------LP---EITTFGLDVSKVAIKAAAKRYP--QVTFCVAS 137 (268)
T ss_dssp CTTCCEEEEETCTTSTTHHHHH--------H-T----------CT---TSEEEEEESCHHHHHHHHHHCT--TSEEEECC
T ss_pred CCCCCEEEEeCCCCcHHHHHHH--------H-H----------CC---CCEEEEecchHhhhhhhhcccc--cccceeee
Confidence 3567899999999999998777 3 2 22 3467777765443222222222 22344443
Q ss_pred CCCcccccCCCCceeEEEecCCccc
Q 017439 141 PGSFHGRLFPESSLHVAHTSNALPW 165 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~alHW 165 (371)
...--||++|+|++++..++|+
T Consensus 138 ---~~~l~~~~~sfD~v~~~~~~~~ 159 (268)
T d1p91a_ 138 ---SHRLPFSDTSMDAIIRIYAPCK 159 (268)
T ss_dssp ---TTSCSBCTTCEEEEEEESCCCC
T ss_pred ---hhhccCCCCCEEEEeecCCHHH
Confidence 3444568999999999888776
|
| >d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical methyltransferase TM1389 species: Thermotoga maritima [TaxId: 2336]
Probab=98.32 E-value=2.2e-07 Score=82.16 Aligned_cols=98 Identities=20% Similarity=0.348 Sum_probs=62.5
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPG 142 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpg 142 (371)
+..+|+|+|||+|..+..+. + + -.+|+..|+-..-- ...+.- ....++.+
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~--------~-~---------------~~~v~giD~s~~~l-~~a~~~--~~~~~~~~--- 91 (246)
T d2avna1 42 NPCRVLDLGGGTGKWSLFLQ--------E-R---------------GFEVVLVDPSKEML-EVAREK--GVKNVVEA--- 91 (246)
T ss_dssp SCCEEEEETCTTCHHHHHHH--------T-T---------------TCEEEEEESCHHHH-HHHHHH--TCSCEEEC---
T ss_pred CCCEEEEECCCCchhccccc--------c-c---------------ceEEEEeecccccc-cccccc--cccccccc---
Confidence 45689999999999998765 2 1 11456666654321 111111 11223332
Q ss_pred Cccccc-CCCCceeEEEec-CCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc
Q 017439 143 SFHGRL-FPESSLHVAHTS-NALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP 220 (371)
Q Consensus 143 SFy~rL-fP~~Svd~~~Ss-~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 220 (371)
+. ..| +|++++|+|+|. ..+||+... ..+|+.-.+-|+|
T Consensus 92 ~~-~~l~~~~~~fD~ii~~~~~~~~~~d~--------------------------------------~~~l~~i~r~Lk~ 132 (246)
T d2avna1 92 KA-EDLPFPSGAFEAVLALGDVLSYVENK--------------------------------------DKAFSEIRRVLVP 132 (246)
T ss_dssp CT-TSCCSCTTCEEEEEECSSHHHHCSCH--------------------------------------HHHHHHHHHHEEE
T ss_pred cc-cccccccccccceeeecchhhhhhhH--------------------------------------HHHHHHHHhhcCc
Confidence 22 334 789999999986 578995431 2367777789999
Q ss_pred CceEEEEec
Q 017439 221 GGLLLLLTP 229 (371)
Q Consensus 221 GG~lvl~~~ 229 (371)
||.+++.++
T Consensus 133 gG~~ii~~~ 141 (246)
T d2avna1 133 DGLLIATVD 141 (246)
T ss_dssp EEEEEEEEE
T ss_pred CcEEEEEEC
Confidence 999999885
|
| >d1fp2a2 c.66.1.12 (A:109-352) Isoflavone O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Plant O-methyltransferase, C-terminal domain domain: Isoflavone O-methyltransferase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=98.27 E-value=4.7e-06 Score=75.45 Aligned_cols=149 Identities=15% Similarity=0.149 Sum_probs=95.6
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccC
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVP 141 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvp 141 (371)
.+.-+|+|+|||+|..++.++ + + .| .++++.-|||. .....+...+ +.-++
T Consensus 79 ~~~~~vvDvGGG~G~~~~~l~--------~-~----------~P---~l~~~v~Dlp~-----vi~~~~~~~r--v~~~~ 129 (244)
T d1fp2a2 79 DGLESIVDVGGGTGTTAKIIC--------E-T----------FP---KLKCIVFDRPQ-----VVENLSGSNN--LTYVG 129 (244)
T ss_dssp TTCSEEEEETCTTSHHHHHHH--------H-H----------CT---TCEEEEEECHH-----HHTTCCCBTT--EEEEE
T ss_pred cCceEEEEecCCccHHHHHHH--------H-h----------CC---CCeEEEecCHH-----HHHhCcccCc--eEEEe
Confidence 445689999999999988776 4 3 45 67899999984 2333333333 34466
Q ss_pred CCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccC
Q 017439 142 GSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPG 221 (371)
Q Consensus 142 gSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 221 (371)
|.|++.. | ..|+++..+.||-. |+ ++-.++|+.-++.|+||
T Consensus 130 gD~f~~~-p--~aD~~~l~~vLHdw---~d---------------------------------~~~~~iL~~~~~al~pg 170 (244)
T d1fp2a2 130 GDMFTSI-P--NADAVLLKYILHNW---TD---------------------------------KDCLRILKKCKEAVTND 170 (244)
T ss_dssp CCTTTCC-C--CCSEEEEESCGGGS---CH---------------------------------HHHHHHHHHHHHHHSGG
T ss_pred cCcccCC-C--CCcEEEEEeecccC---Ch---------------------------------HHHHHHHHHHHHHcCcc
Confidence 7898763 4 46999999999942 32 33445899999999999
Q ss_pred ---ceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHH---HHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEE
Q 017439 222 ---GLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDL---ANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIE 295 (371)
Q Consensus 222 ---G~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~m---v~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~ 295 (371)
|++++.=.-.++... ......+ ..+.+| +-.|. .||.+|+++++++.| |++.
T Consensus 171 g~~~~lli~e~~~~~~~~------~~~~~~~-~~~~dl~m~~~~G~--------------ert~~e~~~ll~~AG-f~~~ 228 (244)
T d1fp2a2 171 GKRGKVTIIDMVIDKKKD------ENQVTQI-KLLMDVNMACLNGK--------------ERNEEEWKKLFIEAG-FQHY 228 (244)
T ss_dssp GCCCEEEEEECEECTTTS------CHHHHHH-HHHHHHHGGGGTCC--------------CEEHHHHHHHHHHTT-CCEE
T ss_pred cCCcEEEEEEeecCCCCC------CchHHHH-HHHHHHHHHhCCCc--------------CCCHHHHHHHHHHcC-CceE
Confidence 556555433222211 0011111 122222 22332 689999999999988 9987
Q ss_pred EEEEe
Q 017439 296 IMNTF 300 (371)
Q Consensus 296 ~~e~~ 300 (371)
++...
T Consensus 229 ~i~~~ 233 (244)
T d1fp2a2 229 KISPL 233 (244)
T ss_dssp EEEEE
T ss_pred EEEEC
Confidence 76544
|
| >d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TrmB-like domain: tRNA (guanine-N(7)-)-methyltransferase TrmB species: Bacillus subtilis [TaxId: 1423]
Probab=98.03 E-value=3.4e-06 Score=74.48 Aligned_cols=110 Identities=14% Similarity=0.144 Sum_probs=74.9
Q ss_pred EEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC---CCcceeeeccCC
Q 017439 66 KIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP---LSKKYFATGVPG 142 (371)
Q Consensus 66 ~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~---~~~~~f~~gvpg 142 (371)
.|+|+|||+|..++.+. + + .| +..++..|+-.+-.....+... -.+-.|+.|...
T Consensus 32 lvLeIGcG~G~~~~~lA--------~-~----------~p---~~~~iGiD~~~~~i~~a~~~~~~~~l~Nv~~~~~Da~ 89 (204)
T d2fcaa1 32 IHIEVGTGKGQFISGMA--------K-Q----------NP---DINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDAD 89 (204)
T ss_dssp EEEEECCTTSHHHHHHH--------H-H----------CT---TSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGG
T ss_pred eEEEEEecCcHHHHHHH--------H-h----------CC---CCcEEEeecchHHHHHHHHHHHHHhccCchhcccchh
Confidence 69999999999998876 3 2 34 5678888887776665544432 223345555543
Q ss_pred CcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCc
Q 017439 143 SFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGG 222 (371)
Q Consensus 143 SFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 222 (371)
.+ .+.+|++++|.++..+...|..+ +. . |.++. ...||+.-++-|||||
T Consensus 90 ~l-~~~~~~~~~d~v~i~fp~P~~k~-~h-~---------k~Rl~-------------------~~~~l~~~~r~LkpgG 138 (204)
T d2fcaa1 90 TL-TDVFEPGEVKRVYLNFSDPWPKK-RH-E---------KRRLT-------------------YSHFLKKYEEVMGKGG 138 (204)
T ss_dssp GH-HHHCCTTSCCEEEEESCCCCCSG-GG-G---------GGSTT-------------------SHHHHHHHHHHHTTSC
T ss_pred hh-hcccCchhhhccccccccccchh-hh-c---------chhhh-------------------HHHHHHHHHHhCCCCc
Confidence 33 35789999999999999999432 11 0 00010 0237888889999999
Q ss_pred eEEEEe
Q 017439 223 LLLLLT 228 (371)
Q Consensus 223 ~lvl~~ 228 (371)
.|++.+
T Consensus 139 ~l~i~T 144 (204)
T d2fcaa1 139 SIHFKT 144 (204)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 998865
|
| >d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Arginine methyltransferase, HMT1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.03 E-value=6.5e-06 Score=77.17 Aligned_cols=99 Identities=22% Similarity=0.269 Sum_probs=63.3
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC----CCCc-ceeee
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV----PLSK-KYFAT 138 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l----~~~~-~~f~~ 138 (371)
.-+|+|+|||+|..|+.+. + . | . . +|+..|... --...+.. .... -.++.
T Consensus 39 ~~~VLDlGcGtG~ls~~aa--------~--~---G-----a----~-~V~avd~s~--~~~~a~~~~~~~~~~~~i~~i~ 93 (328)
T d1g6q1_ 39 DKIVLDVGCGTGILSMFAA--------K--H---G-----A----K-HVIGVDMSS--IIEMAKELVELNGFSDKITLLR 93 (328)
T ss_dssp TCEEEEETCTTSHHHHHHH--------H--T---C-----C----S-EEEEEESST--HHHHHHHHHHHTTCTTTEEEEE
T ss_pred cCEEEEeCCCCCHHHHHHH--------H--h---C-----C----C-EEEEEeCCH--HHHHHHHHHHHhCccccceEEE
Confidence 3589999999999887666 2 1 1 1 1 577777542 12222221 1111 22444
Q ss_pred ccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 139 GVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 139 gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
+ ...+--+|++++|+++|....+.+... .++..++.+|.+-|
T Consensus 94 ~---~~~~l~~~~~~~D~i~se~~~~~~~~e-----------------------------------~~~~~~~~a~~r~L 135 (328)
T d1g6q1_ 94 G---KLEDVHLPFPKVDIIISEWMGYFLLYE-----------------------------------SMMDTVLYARDHYL 135 (328)
T ss_dssp S---CTTTSCCSSSCEEEEEECCCBTTBSTT-----------------------------------CCHHHHHHHHHHHE
T ss_pred e---ehhhccCcccceeEEEEEecceeeccc-----------------------------------hhHHHHHHHHHhcc
Confidence 4 333444689999999999888874432 34556789999999
Q ss_pred ccCceEE
Q 017439 219 VPGGLLL 225 (371)
Q Consensus 219 ~pGG~lv 225 (371)
||||+|+
T Consensus 136 kpgG~ii 142 (328)
T d1g6q1_ 136 VEGGLIF 142 (328)
T ss_dssp EEEEEEE
T ss_pred CCCeEEE
Confidence 9999985
|
| >d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Glycine N-methyltransferase domain: Glycine N-methyltransferase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.02 E-value=3.7e-06 Score=77.27 Aligned_cols=110 Identities=17% Similarity=0.270 Sum_probs=65.9
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC---Cc--ceeee
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL---SK--KYFAT 138 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~---~~--~~f~~ 138 (371)
.-+|+|+|||+|..|+.+.+ + -.+|+.-|+-.+-=+..-+.... .. ..+..
T Consensus 57 ~~~vLD~GcG~G~~~~~la~---------~---------------g~~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~ 112 (292)
T d1xvaa_ 57 CHRVLDVACGTGVDSIMLVE---------E---------------GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVI 112 (292)
T ss_dssp CCEEEESSCTTSHHHHHHHH---------T---------------TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEE
T ss_pred CCEEEEecCCCcHHHHHHHH---------c---------------CCeeeeccCchHHHHHHHHHHHhcccccccceeee
Confidence 46899999999999988762 1 12456666654432111111100 00 00000
Q ss_pred ccCCCcc---cccCCCCceeEEEec-CCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHH
Q 017439 139 GVPGSFH---GRLFPESSLHVAHTS-NALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNAR 214 (371)
Q Consensus 139 gvpgSFy---~rLfP~~Svd~~~Ss-~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~R 214 (371)
....|. ..+.+.+++|++++. .++++| |....+ ..|...+|+.-
T Consensus 113 -~~~~~~~~~~~~~~~~~fd~v~~~~~~~~~~---~~~~~~----------------------------~~~~~~~l~~~ 160 (292)
T d1xvaa_ 113 -EEANWLTLDKDVPAGDGFDAVICLGNSFAHL---PDSKGD----------------------------QSEHRLALKNI 160 (292)
T ss_dssp -EECCGGGHHHHSCCTTCEEEEEECSSCGGGS---CCTTSS----------------------------SHHHHHHHHHH
T ss_pred -eeccccccccccCCCCCceEEEEecCchhhc---CCcccC----------------------------hHHHHHHHHHH
Confidence 011221 345567899999875 578884 332221 25778899999
Q ss_pred HhhcccCceEEEEec
Q 017439 215 AQELVPGGLLLLLTP 229 (371)
Q Consensus 215 a~EL~pGG~lvl~~~ 229 (371)
++-|+|||+|++.+.
T Consensus 161 ~~~LkpgG~li~~~~ 175 (292)
T d1xvaa_ 161 ASMVRPGGLLVIDHR 175 (292)
T ss_dssp HHTEEEEEEEEEEEE
T ss_pred HHHcCcCcEEEEeec
Confidence 999999999999875
|
| >d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Thermotoga maritima [TaxId: 2336]
Probab=97.88 E-value=5.2e-06 Score=73.44 Aligned_cols=82 Identities=15% Similarity=0.104 Sum_probs=48.4
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CCCcceeeec
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PLSKKYFATG 139 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~~~~~f~~g 139 (371)
..-+|+|+|||+|..|..+. + .+.. .-.|+..|.-..-....-+.+ ...+..+..+
T Consensus 75 ~g~~VLdiG~GtG~~s~~la--------~-~~~~------------~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~ 133 (213)
T d1dl5a1 75 KGMRVLEIGGGTGYNAAVMS--------R-VVGE------------KGLVVSVEYSRKICEIAKRNVERLGIENVIFVCG 133 (213)
T ss_dssp TTCEEEEECCTTSHHHHHHH--------H-HHCT------------TCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES
T ss_pred ccceEEEecCccchhHHHHH--------H-HhCC------------CCcEEEeecchhhHHHhhhhHhhhcccccccccC
Confidence 45799999999999998776 2 2211 124555554332222221212 1222334443
Q ss_pred cCCCcccccCCCCceeEEEecCCccccCCCCc
Q 017439 140 VPGSFHGRLFPESSLHVAHTSNALPWLSKIPK 171 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~ 171 (371)
.-.+-+++.+++|.+++..++++ +|.
T Consensus 134 ---d~~~~~~~~~~fD~I~~~~~~~~---~p~ 159 (213)
T d1dl5a1 134 ---DGYYGVPEFSPYDVIFVTVGVDE---VPE 159 (213)
T ss_dssp ---CGGGCCGGGCCEEEEEECSBBSC---CCH
T ss_pred ---chHHccccccchhhhhhhccHHH---hHH
Confidence 33444566778999999999987 564
|
| >d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical protein MJ0882 domain: Hypothetical protein MJ0882 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.87 E-value=2.7e-05 Score=67.24 Aligned_cols=102 Identities=10% Similarity=0.063 Sum_probs=60.3
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhh-----cCCCCccee
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFK-----SVPLSKKYF 136 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~-----~l~~~~~~f 136 (371)
.+.-+|+|+|||+|..|+.+. . + .| +|+..|+-..-....=+ .+...+-.+
T Consensus 51 ~~~~~VLDiGcG~G~~~~~la--------~-~----------~~-----~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~ 106 (194)
T d1dusa_ 51 DKDDDILDLGCGYGVIGIALA--------D-E----------VK-----STTMADINRRAIKLAKENIKLNNLDNYDIRV 106 (194)
T ss_dssp CTTCEEEEETCTTSHHHHHHG--------G-G----------SS-----EEEEEESCHHHHHHHHHHHHHTTCTTSCEEE
T ss_pred CCCCeEEEEeecCChhHHHHH--------h-h----------cc-----ccceeeeccccchhHHHHHHHhCCccceEEE
Confidence 345789999999998887655 2 1 22 34555554332222111 111111122
Q ss_pred eeccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHh
Q 017439 137 ATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQ 216 (371)
Q Consensus 137 ~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~ 216 (371)
..+ .+++ -++++++|+++|+..+|+.. +....||+.-.+
T Consensus 107 ~~~---d~~~-~~~~~~fD~Ii~~~p~~~~~-------------------------------------~~~~~~l~~~~~ 145 (194)
T d1dusa_ 107 VHS---DLYE-NVKDRKYNKIITNPPIRAGK-------------------------------------EVLHRIIEEGKE 145 (194)
T ss_dssp EEC---STTT-TCTTSCEEEEEECCCSTTCH-------------------------------------HHHHHHHHHHHH
T ss_pred EEc---chhh-hhccCCceEEEEcccEEecc-------------------------------------hhhhhHHHHHHH
Confidence 222 3344 45788999999988777621 112346777777
Q ss_pred hcccCceEEEEe
Q 017439 217 ELVPGGLLLLLT 228 (371)
Q Consensus 217 EL~pGG~lvl~~ 228 (371)
-|+|||+|++..
T Consensus 146 ~LkpgG~l~i~~ 157 (194)
T d1dusa_ 146 LLKDNGEIWVVI 157 (194)
T ss_dssp HEEEEEEEEEEE
T ss_pred hcCcCcEEEEEE
Confidence 899999998865
|
| >d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.85 E-value=2.3e-05 Score=70.15 Aligned_cols=109 Identities=13% Similarity=0.034 Sum_probs=65.4
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC-Ccceeeecc
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL-SKKYFATGV 140 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~-~~~~f~~gv 140 (371)
....+|+|+|||+|..+..+. + .. | .-.|+.-|.-.---..+-..... .+...+.+.
T Consensus 73 kpG~~VLDlGcGsG~~~~~la--------~-~~----------~---~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d 130 (230)
T d1g8sa_ 73 KRDSKILYLGASAGTTPSHVA--------D-IA----------D---KGIVYAIEYAPRIMRELLDACAERENIIPILGD 130 (230)
T ss_dssp CTTCEEEEESCCSSHHHHHHH--------H-HT----------T---TSEEEEEESCHHHHHHHHHHTTTCTTEEEEECC
T ss_pred CCCCEEEEeCEEcCHHHHHHH--------H-hC----------C---CCEEEEEeCcHHHHHHHHHHHhhhcccceEEEe
Confidence 456899999999999888776 2 11 1 12567776654332222222221 222344444
Q ss_pred CCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc
Q 017439 141 PGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP 220 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 220 (371)
..... -.++.+.|+.+++..+||..+ ...+++.-..-|||
T Consensus 131 ~~~~~--~~~~~~~~v~~i~~~~~~~~~--------------------------------------~~~~l~~~~r~LKp 170 (230)
T d1g8sa_ 131 ANKPQ--EYANIVEKVDVIYEDVAQPNQ--------------------------------------AEILIKNAKWFLKK 170 (230)
T ss_dssp TTCGG--GGTTTCCCEEEEEECCCSTTH--------------------------------------HHHHHHHHHHHEEE
T ss_pred eccCc--ccccccceeEEeeccccchHH--------------------------------------HHHHHHHHHHhccc
Confidence 33322 235566777777777777322 23367777789999
Q ss_pred CceEEEEecCcC
Q 017439 221 GGLLLLLTPTIR 232 (371)
Q Consensus 221 GG~lvl~~~gr~ 232 (371)
||++++..-.+.
T Consensus 171 gG~~~i~~k~~~ 182 (230)
T d1g8sa_ 171 GGYGMIAIKARS 182 (230)
T ss_dssp EEEEEEEEEGGG
T ss_pred CceEEEEeeccc
Confidence 999999886554
|
| >d1yzha1 c.66.1.53 (A:8-211) tRNA (guanine-N(7)-)-methyltransferase TrmB {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TrmB-like domain: tRNA (guanine-N(7)-)-methyltransferase TrmB species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.84 E-value=1.5e-05 Score=70.13 Aligned_cols=110 Identities=14% Similarity=0.124 Sum_probs=72.6
Q ss_pred EEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC--Ccc-eeeeccCC
Q 017439 66 KIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL--SKK-YFATGVPG 142 (371)
Q Consensus 66 ~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~--~~~-~f~~gvpg 142 (371)
.|+|+|||+|.+++.+. . . .| +..++-.|+-.+-.....+.... -.+ .|..+...
T Consensus 34 lvLdIGcG~G~~~~~lA--------~-~----------~p---~~~~iGid~~~~~v~~a~~~~~~~~l~Ni~~~~~da~ 91 (204)
T d1yzha1 34 IHVEVGSGKGAFVSGMA--------K-Q----------NP---DINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGS 91 (204)
T ss_dssp EEEEESCTTSHHHHHHH--------H-H----------CT---TSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSS
T ss_pred eEEEEeccCCHHHHHHH--------H-H----------CC---CCceEEEeccHHHHHHHHHhhhhhccccceeeecCHH
Confidence 68999999999998876 2 1 34 56788888776655554443321 123 34445444
Q ss_pred CcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCc
Q 017439 143 SFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGG 222 (371)
Q Consensus 143 SFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 222 (371)
-+ .+.+|++|+|.++.++.-.|-.+--. . .++ -. ..||+.-++-|+|||
T Consensus 92 ~l-~~~~~~~~~~~i~i~fPdPw~K~~h~--k---------rRl----~~---------------~~~l~~~~~~LkpgG 140 (204)
T d1yzha1 92 DL-TDYFEDGEIDRLYLNFSDPWPKKRHE--K---------RRL----TY---------------KTFLDTFKRILPENG 140 (204)
T ss_dssp CG-GGTSCTTCCSEEEEESCCCCCSGGGG--G---------GST----TS---------------HHHHHHHHHHSCTTC
T ss_pred HH-hhhccCCceehhcccccccccchhhh--h---------hhh----hH---------------HHHHHHHHHhCCCCc
Confidence 44 46789999999999999999332110 0 000 01 237888889999999
Q ss_pred eEEEEe
Q 017439 223 LLLLLT 228 (371)
Q Consensus 223 ~lvl~~ 228 (371)
.+.+.+
T Consensus 141 ~l~i~T 146 (204)
T d1yzha1 141 EIHFKT 146 (204)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 998865
|
| >d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 1, PRMT1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.77 E-value=2.4e-05 Score=72.80 Aligned_cols=99 Identities=19% Similarity=0.150 Sum_probs=63.8
Q ss_pred eEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---C-CCcceeeecc
Q 017439 65 FKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---P-LSKKYFATGV 140 (371)
Q Consensus 65 ~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~-~~~~~f~~gv 140 (371)
-+|+|+|||+|..|+.+. + . | + . +|+.-|...+ -...-+.. . ..+-.++.|
T Consensus 35 ~~VLDiGcG~G~ls~~aa--------~--~---G------a---~-~V~avd~s~~-~~~a~~~~~~n~~~~~v~~~~~- 89 (316)
T d1oria_ 35 KVVLDVGSGTGILCMFAA--------K--A---G------A---R-KVIGIECSSI-SDYAVKIVKANKLDHVVTIIKG- 89 (316)
T ss_dssp CEEEEETCTTSHHHHHHH--------H--T---T------C---S-EEEEEECSTT-HHHHHHHHHHTTCTTTEEEEES-
T ss_pred CEEEEEecCCcHHHHHHH--------H--h---C------C---C-EEEEEcCcHH-HhhhhhHHHHhCCccccceEec-
Confidence 479999999999887666 2 1 1 1 1 5777886432 22221211 1 112224443
Q ss_pred CCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc
Q 017439 141 PGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP 220 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 220 (371)
...+--+|.+++|+++|....|.+-. +.++..+|.+|.+-|+|
T Consensus 90 --~~~~~~~~~~~~D~ivs~~~~~~l~~-----------------------------------e~~~~~~l~~~~r~Lkp 132 (316)
T d1oria_ 90 --KVEEVELPVEKVDIIISEWMGYCLFY-----------------------------------ESMLNTVLHARDKWLAP 132 (316)
T ss_dssp --CTTTCCCSSSCEEEEEECCCBBTBTB-----------------------------------TCCHHHHHHHHHHHEEE
T ss_pred --cHHHcccccceeEEEeeeeeeeeecc-----------------------------------HHHHHHHHHHHHhcCCC
Confidence 34444468899999999877777332 13466689999999999
Q ss_pred CceEE
Q 017439 221 GGLLL 225 (371)
Q Consensus 221 GG~lv 225 (371)
||+++
T Consensus 133 ~G~ii 137 (316)
T d1oria_ 133 DGLIF 137 (316)
T ss_dssp EEEEE
T ss_pred CeEEE
Confidence 99986
|
| >d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 3, PRMT3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.71 E-value=0.00011 Score=67.76 Aligned_cols=100 Identities=20% Similarity=0.183 Sum_probs=61.2
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhc----CCCCcc-eeee
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKS----VPLSKK-YFAT 138 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~----l~~~~~-~f~~ 138 (371)
.-+|+|+|||+|..|+.+. + . | + . +|+..|...+- ...+. ...... .++.
T Consensus 36 ~~~VLDiGcG~G~lsl~aa--------~--~---G------a---~-~V~aid~s~~~--~~a~~~~~~~~~~~~i~~~~ 90 (311)
T d2fyta1 36 DKVVLDVGCGTGILSMFAA--------K--A---G------A---K-KVLGVDQSEIL--YQAMDIIRLNKLEDTITLIK 90 (311)
T ss_dssp TCEEEEETCTTSHHHHHHH--------H--T---T------C---S-EEEEEESSTHH--HHHHHHHHHTTCTTTEEEEE
T ss_pred cCEEEEECCCCCHHHHHHH--------H--c---C------C---C-EEEEEeCHHHH--HHHHHHHHHhCCCccceEEE
Confidence 4589999999999887766 2 1 1 1 1 57777765431 11111 111122 2333
Q ss_pred ccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 139 GVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 139 gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
+. ..+--+|.+++|+++|....|-+.. +..+..++.+|.+-|
T Consensus 91 ~~---~~~l~~~~~~~D~Ivse~~~~~~~~-----------------------------------e~~~~~~~~a~~~~L 132 (311)
T d2fyta1 91 GK---IEEVHLPVEKVDVIISEWMGYFLLF-----------------------------------ESMLDSVLYAKNKYL 132 (311)
T ss_dssp SC---TTTSCCSCSCEEEEEECCCBTTBTT-----------------------------------TCHHHHHHHHHHHHE
T ss_pred ee---HHHhcCccccceEEEEeeeeeeccc-----------------------------------ccccHHHHHHHHhcC
Confidence 32 2333358899999999776665322 123445788899999
Q ss_pred ccCceEEE
Q 017439 219 VPGGLLLL 226 (371)
Q Consensus 219 ~pGG~lvl 226 (371)
+|||+++.
T Consensus 133 kp~G~iip 140 (311)
T d2fyta1 133 AKGGSVYP 140 (311)
T ss_dssp EEEEEEES
T ss_pred CCCcEEec
Confidence 99999973
|
| >d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Catalytic, N-terminal domain of histone methyltransferase Dot1l domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.58 E-value=0.00019 Score=67.19 Aligned_cols=21 Identities=19% Similarity=0.229 Sum_probs=17.5
Q ss_pred CceEEeeecCCCCcccHHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAMQ 83 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~ 83 (371)
..-+|+|+|||+|..++.+..
T Consensus 151 ~~~~vlD~GcG~G~~~~~~a~ 171 (328)
T d1nw3a_ 151 DDDLFVDLGSGVGQVVLQVAA 171 (328)
T ss_dssp TTCEEEEETCTTSHHHHHHHH
T ss_pred CCCEEEEcCCCCCHHHHHHHH
Confidence 346899999999999987763
|
| >d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein Ta0852 species: Thermoplasma acidophilum [TaxId: 2303]
Probab=97.56 E-value=0.00015 Score=65.61 Aligned_cols=20 Identities=15% Similarity=0.346 Sum_probs=17.7
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~ 82 (371)
.-.+|+|+|||+|..|+.+.
T Consensus 85 pG~rVLEiG~GsG~lt~~la 104 (250)
T d1yb2a1 85 PGMDILEVGVGSGNMSSYIL 104 (250)
T ss_dssp TTCEEEEECCTTSHHHHHHH
T ss_pred CcCEEEEeeeeCcHHHHHHH
Confidence 34799999999999999887
|
| >d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.48 E-value=5e-05 Score=67.52 Aligned_cols=82 Identities=18% Similarity=0.136 Sum_probs=45.3
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC--------CCcc
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP--------LSKK 134 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~--------~~~~ 134 (371)
..-+|+|+|||+|..|..+.. .+. | .-.|+.-|.-..-....-+.+. ...-
T Consensus 76 ~g~~VLdiG~GsGy~ta~la~---------l~~---------~---~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~ 134 (224)
T d1i1na_ 76 EGAKALDVGSGSGILTACFAR---------MVG---------C---TGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRV 134 (224)
T ss_dssp TTCEEEEETCTTSHHHHHHHH---------HHC---------T---TCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSE
T ss_pred CCCeEEEecCCCCHHHHHHHH---------HhC---------C---CceEEEEcCCHHHHHHHHHhccccCcccccccce
Confidence 457999999999999987662 111 1 1134444433322111111110 0111
Q ss_pred eeeeccCCCcccccCCCCceeEEEecCCccccCCCCc
Q 017439 135 YFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPK 171 (371)
Q Consensus 135 ~f~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~ 171 (371)
.+..| .-+.-.++.+++|.|++..++++ +|.
T Consensus 135 ~~~~g---D~~~~~~~~~~fD~I~~~~~~~~---ip~ 165 (224)
T d1i1na_ 135 QLVVG---DGRMGYAEEAPYDAIHVGAAAPV---VPQ 165 (224)
T ss_dssp EEEES---CGGGCCGGGCCEEEEEECSBBSS---CCH
T ss_pred EEEEe---ecccccchhhhhhhhhhhcchhh---cCH
Confidence 22322 23444567788999999999987 675
|
| >d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Sulfolobus tokodaii [TaxId: 111955]
Probab=97.45 E-value=0.00015 Score=64.63 Aligned_cols=20 Identities=20% Similarity=0.277 Sum_probs=16.7
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~ 82 (371)
..-+|+|+|||+|..|..+.
T Consensus 70 ~g~~VLdIG~GsGy~ta~La 89 (224)
T d1vbfa_ 70 KGQKVLEIGTGIGYYTALIA 89 (224)
T ss_dssp TTCEEEEECCTTSHHHHHHH
T ss_pred ccceEEEecCCCCHHHHHHH
Confidence 45699999999999997654
|
| >d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Probable methyltransferase Rv2118c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.42 E-value=0.00027 Score=64.39 Aligned_cols=20 Identities=15% Similarity=0.340 Sum_probs=18.2
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~ 82 (371)
.-.+|+|.|||+|..|+.+.
T Consensus 96 PG~~VLE~G~GsG~lt~~La 115 (264)
T d1i9ga_ 96 PGARVLEAGAGSGALTLSLL 115 (264)
T ss_dssp TTCEEEEECCTTSHHHHHHH
T ss_pred CCCEEEecCcCCcHHHHHHH
Confidence 35799999999999999888
|
| >d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ribosomal protein L11 methyltransferase PrmA domain: PrmA-like protein TTHA0656 (TT0836) species: Thermus thermophilus [TaxId: 274]
Probab=97.31 E-value=9.3e-05 Score=67.12 Aligned_cols=19 Identities=32% Similarity=0.338 Sum_probs=16.0
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~ 82 (371)
.-+|+|+|||+|..++.+.
T Consensus 121 g~~VLDiGcGsG~l~i~aa 139 (254)
T d2nxca1 121 GDKVLDLGTGSGVLAIAAE 139 (254)
T ss_dssp TCEEEEETCTTSHHHHHHH
T ss_pred cCEEEEcccchhHHHHHHH
Confidence 3699999999999887655
|
| >d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=97.28 E-value=0.0014 Score=58.15 Aligned_cols=110 Identities=14% Similarity=0.039 Sum_probs=63.7
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCc-ceeeecc
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSK-KYFATGV 140 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~-~~f~~gv 140 (371)
..-.+|+|+|||+|..|..+.+ .... .=.||.-|.-..--..+-+...... ...+.+.
T Consensus 72 ~pG~~VLDlGaGsG~~t~~la~---------~VG~------------~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d 130 (227)
T d1g8aa_ 72 KPGKSVLYLGIASGTTASHVSD---------IVGW------------EGKIFGIEFSPRVLRELVPIVEERRNIVPILGD 130 (227)
T ss_dssp CTTCEEEEETTTSTTHHHHHHH---------HHCT------------TSEEEEEESCHHHHHHHHHHHSSCTTEEEEECC
T ss_pred CCCCEEEEeccCCCHHHHHHHH---------HhCC------------CCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEE
Confidence 3458999999999999998872 2211 1146666655543333322222222 2233343
Q ss_pred CCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc
Q 017439 141 PGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP 220 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 220 (371)
-+.-..--++..++|++++..+.++ +-..|++.-.+-|+|
T Consensus 131 ~~~~~~~~~~~~~vD~i~~d~~~~~----------------------------------------~~~~~l~~~~~~Lkp 170 (227)
T d1g8aa_ 131 ATKPEEYRALVPKVDVIFEDVAQPT----------------------------------------QAKILIDNAEVYLKR 170 (227)
T ss_dssp TTCGGGGTTTCCCEEEEEECCCSTT----------------------------------------HHHHHHHHHHHHEEE
T ss_pred CCCcccccccccceEEEEEEccccc----------------------------------------hHHHHHHHHHHhccc
Confidence 3333333345568999887532211 112367777789999
Q ss_pred CceEEEEecCcC
Q 017439 221 GGLLLLLTPTIR 232 (371)
Q Consensus 221 GG~lvl~~~gr~ 232 (371)
||++++..-.+.
T Consensus 171 gG~lvi~~ka~~ 182 (227)
T d1g8aa_ 171 GGYGMIAVKSRS 182 (227)
T ss_dssp EEEEEEEEEGGG
T ss_pred CCeEEEEEECCc
Confidence 999999876543
|
| >d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Precorrin-6Y methyltransferase (CbiT) domain: Precorrin-6Y methyltransferase (CbiT) species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=97.28 E-value=0.00019 Score=61.32 Aligned_cols=21 Identities=29% Similarity=0.387 Sum_probs=17.7
Q ss_pred CCceEEeeecCCCCcccHHHH
Q 017439 62 SSTFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~ 82 (371)
.+.-+|+|+|||+|..|+.+.
T Consensus 32 ~~g~~VLDiGcGsG~~s~~lA 52 (186)
T d1l3ia_ 32 GKNDVAVDVGCGTGGVTLELA 52 (186)
T ss_dssp CTTCEEEEESCTTSHHHHHHH
T ss_pred CCCCEEEEEECCeEccccccc
Confidence 345689999999999998766
|
| >d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Guanidinoacetate methyltransferase domain: Guanidinoacetate methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.20 E-value=0.00045 Score=60.80 Aligned_cols=23 Identities=26% Similarity=0.364 Sum_probs=18.0
Q ss_pred hhHHHHHHHHHhhcccCceEEEE
Q 017439 205 NDIESFLNARAQELVPGGLLLLL 227 (371)
Q Consensus 205 ~D~~~FL~~Ra~EL~pGG~lvl~ 227 (371)
.|...||+.-.+-|||||+|++.
T Consensus 140 ~~~~~~~~~~~r~LkpGG~~~~~ 162 (229)
T d1zx0a1 140 HQFNFIKNHAFRLLKPGGVLTYC 162 (229)
T ss_dssp HHHHHHHHTHHHHEEEEEEEEEC
T ss_pred cCHHHHHHHHHHHcCCCcEEEEE
Confidence 35556788888899999999763
|
| >d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: N5-glutamine methyltransferase, HemK domain: N5-glutamine methyltransferase, HemK species: Escherichia coli [TaxId: 562]
Probab=97.15 E-value=0.001 Score=60.77 Aligned_cols=117 Identities=18% Similarity=0.270 Sum_probs=65.0
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC--CCcceeeec
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP--LSKKYFATG 139 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~--~~~~~f~~g 139 (371)
.++.+|+|+|||+|.-++.+.. + .| ..+|+..|.-..=.+..=++.. .-.++ --
T Consensus 107 ~~~~~vlDlGtGSG~I~i~la~---------~----------~p---~~~v~avDis~~Al~~A~~Na~~~~~~~v--~~ 162 (274)
T d2b3ta1 107 EQPCRILDLGTGTGAIALALAS---------E----------RP---DCEIIAVDRMPDAVSLAQRNAQHLAIKNI--HI 162 (274)
T ss_dssp SSCCEEEEETCTTSHHHHHHHH---------H----------CT---TSEEEEECSSHHHHHHHHHHHHHHTCCSE--EE
T ss_pred ccccceeeeehhhhHHHHHHHh---------h----------CC---cceeeeccchhHHHhHHHHHHHHhCcccc--ee
Confidence 4568899999999999888762 1 23 4467777765433222222211 00122 11
Q ss_pred cCCCcccccCCCCceeEEEecCCccccCCCCccccC------------CCCCCcCCCceeecCCCHHHHHHHHHHHHhhH
Q 017439 140 VPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITN------------SNSPAWNRGHILCSGFEKEVAEAYSAQFKNDI 207 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d------------~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~ 207 (371)
+-|+++.. +|.+++|+++|+ |+-+.. ....++..| + -.-..+
T Consensus 163 ~~~d~~~~-~~~~~fDlIvsN---------PPYi~~~~~~~~~~v~~~eP~~AL~~g---------~-------dGl~~~ 216 (274)
T d2b3ta1 163 LQSDWFSA-LAGQQFAMIVSN---------PPYIDEQDPHLQQGDVRFEPLTALVAA---------D-------SGMADI 216 (274)
T ss_dssp ECCSTTGG-GTTCCEEEEEEC---------CCCBCTTCHHHHSSGGGSSCSTTTBCH---------H-------HHTHHH
T ss_pred eecccccc-cCCCceeEEEec---------chhhhhhhhcccccccccchhhhcccc---------c-------ccchHH
Confidence 22344443 356799999998 222211 001111111 1 112344
Q ss_pred HHHHHHHHhhcccCceEEEEe
Q 017439 208 ESFLNARAQELVPGGLLLLLT 228 (371)
Q Consensus 208 ~~FL~~Ra~EL~pGG~lvl~~ 228 (371)
..+++.=.+-|+|||.+++.+
T Consensus 217 ~~i~~~a~~~L~~~G~l~lEi 237 (274)
T d2b3ta1 217 VHIIEQSRNALVSGGFLLLEH 237 (274)
T ss_dssp HHHHHHHGGGEEEEEEEEEEC
T ss_pred HHHHHHHHHhcCCCCEEEEEE
Confidence 557777778899999999976
|
| >d1af7a2 c.66.1.8 (A:92-284) Chemotaxis receptor methyltransferase CheR, C-terminal domain {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Chemotaxis receptor methyltransferase CheR, C-terminal domain domain: Chemotaxis receptor methyltransferase CheR, C-terminal domain species: Salmonella typhimurium [TaxId: 90371]
Probab=97.12 E-value=0.00093 Score=57.51 Aligned_cols=116 Identities=17% Similarity=0.330 Sum_probs=66.9
Q ss_pred CCCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhh---------hhcCCC
Q 017439 61 TSSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTL---------FKSVPL 131 (371)
Q Consensus 61 ~~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~l---------F~~l~~ 131 (371)
..+++||.+.|||+|-=...+...+-++... . .. .++++..|.-.+--..- ++.+++
T Consensus 22 ~~~~lrIwsaGCstGeE~YSlA~~l~e~~~~---------~--~~---~~~I~atDi~~~~l~~A~~g~y~~~~~~~~~~ 87 (193)
T d1af7a2 22 RHGEYRVWSAAASTGEEPYSIAITLADALGM---------A--PG---RWKVFASDIDTEVLEKARSGIYRLSELKTLSP 87 (193)
T ss_dssp SCSCEEEEESCCTTTHHHHHHHHHHHHHHCS---------C--TT---SEEEEEEESCHHHHHHHHHTEEEGGGGTTSCH
T ss_pred cCCCeEEEEeCCCCchhHHHHHHHHHHhhhh---------c--CC---ceEEEeecCChHHhhHhhcCcccHHHHhhhhH
Confidence 4568999999999998655444322222111 1 23 68899999855332111 111111
Q ss_pred C--cceeeeccCCC---------------------cccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceee
Q 017439 132 S--KKYFATGVPGS---------------------FHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILC 188 (371)
Q Consensus 132 ~--~~~f~~gvpgS---------------------Fy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~ 188 (371)
. ..||.-...+. ....-.|.+.+|+|+|-+.|+.++. +
T Consensus 88 ~~~~~yf~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~fDvI~CRNVLiYf~~-~------------------ 148 (193)
T d1af7a2 88 QQLQRYFMRGTGPHEGLVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDK-T------------------ 148 (193)
T ss_dssp HHHHHHEEECCTTSCSEEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCH-H------------------
T ss_pred HHHhhceeecCCCccceeehHHHHHHHHHHhhhhccccccCCCCCccEEEeehhHHhcCH-H------------------
Confidence 1 13343322111 1111235678999999999999654 1
Q ss_pred cCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEE
Q 017439 189 SGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLL 226 (371)
Q Consensus 189 ~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl 226 (371)
...+.|+.-++-|+|||.|++
T Consensus 149 -----------------~~~~vl~~l~~~L~pGG~L~l 169 (193)
T d1af7a2 149 -----------------TQEDILRRFVPLLKPDGLLFA 169 (193)
T ss_dssp -----------------HHHHHHHHHGGGEEEEEEEEE
T ss_pred -----------------HHHHHHHHHHHHhCCCcEEEE
Confidence 122357777899999998764
|
| >d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.10 E-value=0.00057 Score=59.76 Aligned_cols=23 Identities=9% Similarity=0.027 Sum_probs=19.0
Q ss_pred HHHHHHHhhcccCceEEEEecCc
Q 017439 209 SFLNARAQELVPGGLLLLLTPTI 231 (371)
Q Consensus 209 ~FL~~Ra~EL~pGG~lvl~~~gr 231 (371)
.||+.-.+-|+|||++++..-.+
T Consensus 141 ~~l~~~~~~LkpgG~l~i~~~~~ 163 (209)
T d1nt2a_ 141 ILKANAEFFLKEKGEVVIMVKAR 163 (209)
T ss_dssp HHHHHHHHHEEEEEEEEEEEEHH
T ss_pred HHHHHHHHHhccCCeEEEEEEcc
Confidence 47777788999999999987554
|
| >d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Catalytic, N-terminal domain of histone methyltransferase Dot1l domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.94 E-value=0.00077 Score=64.96 Aligned_cols=19 Identities=26% Similarity=0.254 Sum_probs=16.7
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~ 82 (371)
.-+|+|+|||.|..++.+.
T Consensus 217 gd~fLDLGCG~G~~vl~aA 235 (406)
T d1u2za_ 217 GDTFMDLGSGVGNCVVQAA 235 (406)
T ss_dssp TCEEEEESCTTSHHHHHHH
T ss_pred CCEEEeCCCCCcHHHHHHH
Confidence 4689999999999998776
|
| >d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=96.92 E-value=0.0012 Score=58.07 Aligned_cols=20 Identities=20% Similarity=0.356 Sum_probs=17.0
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~ 82 (371)
+.-+|+|+|||+|..|..+.
T Consensus 78 ~g~~VLeIGsGsGY~taila 97 (215)
T d1jg1a_ 78 PGMNILEVGTGSGWNAALIS 97 (215)
T ss_dssp TTCCEEEECCTTSHHHHHHH
T ss_pred ccceEEEecCCCChhHHHHH
Confidence 34699999999999998655
|
| >d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein TM0748 species: Thermotoga maritima [TaxId: 2336]
Probab=96.61 E-value=0.0066 Score=54.79 Aligned_cols=21 Identities=19% Similarity=0.249 Sum_probs=18.3
Q ss_pred CCceEEeeecCCCCcccHHHH
Q 017439 62 SSTFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~ 82 (371)
....+|+|+|||+|..|+.+.
T Consensus 102 ~pG~~VLDiG~GsG~lt~~lA 122 (266)
T d1o54a_ 102 KEGDRIIDTGVGSGAMCAVLA 122 (266)
T ss_dssp CTTCEEEEECCTTSHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHH
Confidence 345899999999999999877
|
| >d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein FLJ20628 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.28 E-value=0.013 Score=54.32 Aligned_cols=20 Identities=10% Similarity=0.214 Sum_probs=18.0
Q ss_pred ceEEeeecCCCCcccHHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAMQ 83 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~ 83 (371)
.-+|+|+|||+|..|+.+..
T Consensus 99 G~rVLE~GtGsG~lt~~LAr 118 (324)
T d2b25a1 99 GDTVLEAGSGSGGMSLFLSK 118 (324)
T ss_dssp TCEEEEECCTTSHHHHHHHH
T ss_pred CCEEEEecccccHHHHHHHH
Confidence 47999999999999998884
|
| >d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=95.92 E-value=0.0038 Score=54.97 Aligned_cols=20 Identities=25% Similarity=0.247 Sum_probs=17.5
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~ 82 (371)
+.-+|+|+|||+|..|..+.
T Consensus 80 ~g~~VLeIGtGsGY~ta~la 99 (223)
T d1r18a_ 80 PGARILDVGSGSGYLTACFY 99 (223)
T ss_dssp TTCEEEEESCTTSHHHHHHH
T ss_pred CCCeEEEecCCCCHHHHHHH
Confidence 45799999999999998775
|
| >d2f8la1 c.66.1.45 (A:2-329) Hypothetical protein Lmo1582 {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: N-6 DNA Methylase-like domain: Hypothetical protein Lmo1582 species: Listeria monocytogenes [TaxId: 1639]
Probab=95.07 E-value=0.022 Score=52.03 Aligned_cols=127 Identities=15% Similarity=0.100 Sum_probs=67.0
Q ss_pred CCCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhc--CCCCcceeee
Q 017439 61 TSSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKS--VPLSKKYFAT 138 (371)
Q Consensus 61 ~~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~--l~~~~~~f~~ 138 (371)
..+..+|+|.|||+|...+.++ +.+.+ +. .+ .++++..|.-..-....-.. +......+..
T Consensus 115 ~~~~~~vlDp~~GsG~~l~~~~----~~l~~-~~---------~~---~~~~~g~di~~~~~~~a~~~~~~~~~~~~~~~ 177 (328)
T d2f8la1 115 KKKNVSILDPACGTANLLTTVI----NQLEL-KG---------DV---DVHASGVDVDDLLISLALVGADLQRQKMTLLH 177 (328)
T ss_dssp TCSEEEEEETTCTTSHHHHHHH----HHHHT-TS---------SC---EEEEEEEESCHHHHHHHHHHHHHHTCCCEEEE
T ss_pred CCCCCEEEeCCCCcchhHHHHH----HHHHh-cc---------Cc---cceEEEecccHHHHHHHHHHHHHhhhhhhhhc
Confidence 3467899999999997766555 22323 11 33 67888888644332211111 1111122222
Q ss_pred ccCCCcccccCCCCceeEEEecCCc--cccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHh
Q 017439 139 GVPGSFHGRLFPESSLHVAHTSNAL--PWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQ 216 (371)
Q Consensus 139 gvpgSFy~rLfP~~Svd~~~Ss~al--HWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~ 216 (371)
+. .-...|...+|+++++=-. +|... ...........+. + .-...|+..-.+
T Consensus 178 ~d----~~~~~~~~~fD~vi~NPPy~~~~~~~----~~~~~~~~~~~~~-----~-------------~~~~~Fi~~~~~ 231 (328)
T d2f8la1 178 QD----GLANLLVDPVDVVISDLPVGYYPDDE----NAKTFELCREEGH-----S-------------FAHFLFIEQGMR 231 (328)
T ss_dssp SC----TTSCCCCCCEEEEEEECCCSEESCHH----HHTTSTTCCSSSC-----E-------------EHHHHHHHHHHH
T ss_pred cc----cccccccccccccccCCCCCCCccch----hhhhcchhcccCc-----c-------------hHHHHHHHHHHH
Confidence 21 1234577889999998433 22111 1100000001111 0 012237888889
Q ss_pred hcccCceEEEEecC
Q 017439 217 ELVPGGLLLLLTPT 230 (371)
Q Consensus 217 EL~pGG~lvl~~~g 230 (371)
-|+|||+++++++.
T Consensus 232 ~Lk~~G~~~~I~p~ 245 (328)
T d2f8la1 232 YTKPGGYLFFLVPD 245 (328)
T ss_dssp TEEEEEEEEEEEEG
T ss_pred hcCCCCceEEEecC
Confidence 99999999999875
|
| >d2h00a1 c.66.1.54 (A:5-254) Methyltransferase 10 domain containing protein METT10D {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Methyltransferase 10 domain domain: Methyltransferase 10 domain containing protein METT10D species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.00 E-value=0.044 Score=48.52 Aligned_cols=22 Identities=14% Similarity=-0.029 Sum_probs=19.3
Q ss_pred CCceEEeeecCCCCcccHHHHH
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQ 83 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~ 83 (371)
.+..+|+|+|||+|.-++.+..
T Consensus 60 ~~~~~~LDiGtGsg~I~~~l~~ 81 (250)
T d2h00a1 60 STLRRGIDIGTGASCIYPLLGA 81 (250)
T ss_dssp CCCCEEEEESCTTTTHHHHHHH
T ss_pred cccceEEEeCCCchHHHHHHHH
Confidence 4578999999999999998874
|
| >d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein TTHA1280, middle and C-terminal domains species: Thermus thermophilus [TaxId: 274]
Probab=94.34 E-value=0.19 Score=45.75 Aligned_cols=29 Identities=14% Similarity=0.078 Sum_probs=23.0
Q ss_pred HHHhhHHHHHHHHHhhcccCceEEEEecC
Q 017439 202 QFKNDIESFLNARAQELVPGGLLLLLTPT 230 (371)
Q Consensus 202 Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~g 230 (371)
...+|+..++..-.+-|+|||.|++..+.
T Consensus 235 ~~~~~~~~l~~~a~~lLkpGG~Lv~~scs 263 (318)
T d1wxxa2 235 RAYRAYKEVNLRAIKLLKEGGILATASCS 263 (318)
T ss_dssp HHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 34456667888889999999999987754
|
| >d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: MraW-like putative methyltransferases domain: TM0872, methyltransferase domain species: Thermotoga maritima [TaxId: 2336]
Probab=93.31 E-value=0.019 Score=49.16 Aligned_cols=26 Identities=23% Similarity=0.520 Sum_probs=21.1
Q ss_pred hHHHHHHHHHhhcccCceEEEEecCc
Q 017439 206 DIESFLNARAQELVPGGLLLLLTPTI 231 (371)
Q Consensus 206 D~~~FL~~Ra~EL~pGG~lvl~~~gr 231 (371)
....+|..+..-|+|||+|++...-.
T Consensus 119 ~~~~~L~~a~~~Lk~gG~l~ii~f~s 144 (192)
T d1m6ya2 119 NLKEFLKKAEDLLNPGGRIVVISFHS 144 (192)
T ss_dssp HHHHHHHHGGGGEEEEEEEEEEESSH
T ss_pred hHHHHHHHHHHhcCCCCeeeeecccc
Confidence 34567999999999999999877543
|
| >d2ih2a1 c.66.1.27 (A:21-243) DNA methylase TaqI, N-terminal domain {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: DNA methylase TaqI, N-terminal domain domain: DNA methylase TaqI, N-terminal domain species: Thermus aquaticus [TaxId: 271]
Probab=93.27 E-value=0.45 Score=39.57 Aligned_cols=23 Identities=35% Similarity=0.764 Sum_probs=19.0
Q ss_pred HHHHHHHHhhcccCceEEEEecC
Q 017439 208 ESFLNARAQELVPGGLLLLLTPT 230 (371)
Q Consensus 208 ~~FL~~Ra~EL~pGG~lvl~~~g 230 (371)
..|+..-.+-|++||++++.++.
T Consensus 124 ~~Fi~~al~~lk~~G~~~~I~p~ 146 (223)
T d2ih2a1 124 GAFLEKAVRLLKPGGVLVFVVPA 146 (223)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEEG
T ss_pred HHHHHHHHHhcccCCceEEEEee
Confidence 45778778889999999999863
|
| >d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein PH1915, middle and C-terminal domains species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=92.56 E-value=0.16 Score=46.43 Aligned_cols=29 Identities=14% Similarity=-0.026 Sum_probs=23.1
Q ss_pred HHhhHHHHHHHHHhhcccCceEEEEecCc
Q 017439 203 FKNDIESFLNARAQELVPGGLLLLLTPTI 231 (371)
Q Consensus 203 ~~~D~~~FL~~Ra~EL~pGG~lvl~~~gr 231 (371)
..+|+..++..-.+-|+|||+|++..+..
T Consensus 238 ~~~~y~~l~~~a~~ll~pGG~lv~~s~s~ 266 (324)
T d2as0a2 238 GLRAYFNVNFAGLNLVKDGGILVTCSCSQ 266 (324)
T ss_dssp HHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred HHHHHHHHHHHHHHHcCCCcEEEEEeCCc
Confidence 44566778888888999999999987544
|
| >d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Met-10+ protein-like domain: Hypothetical protein PH0793 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=91.94 E-value=0.11 Score=46.26 Aligned_cols=69 Identities=10% Similarity=0.028 Sum_probs=44.3
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC--C-Ccc-eeeec
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP--L-SKK-YFATG 139 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~--~-~~~-~f~~g 139 (371)
.-+|+|+|||+|+.|+.+. . .. .-+|+..|+-.+-+..+=+.+. . ... .+..|
T Consensus 108 g~~VlD~~aG~G~~~l~~a--------~--~~-------------~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~ 164 (260)
T d2frna1 108 DELVVDMFAGIGHLSLPIA--------V--YG-------------KAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNM 164 (260)
T ss_dssp TCEEEETTCTTTTTHHHHH--------H--HT-------------CCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECS
T ss_pred ccEEEECcceEcHHHHHHH--------H--hC-------------CcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEc
Confidence 4789999999999999876 2 11 1158888887766655544432 1 122 34455
Q ss_pred cCCCcccccCCCCceeEEEe
Q 017439 140 VPGSFHGRLFPESSLHVAHT 159 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~S 159 (371)
... .+.+.+.+|.++.
T Consensus 165 D~~----~~~~~~~~D~Ii~ 180 (260)
T d2frna1 165 DNR----DFPGENIADRILM 180 (260)
T ss_dssp CTT----TCCCCSCEEEEEE
T ss_pred chH----HhccCCCCCEEEE
Confidence 533 3456788898875
|
| >d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ta1320-like domain: Hypothetical protein PH1948 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=90.53 E-value=0.3 Score=41.28 Aligned_cols=19 Identities=37% Similarity=0.478 Sum_probs=16.0
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~ 82 (371)
.-+|+|+|||+|..++.++
T Consensus 47 g~~vLDlg~GtG~l~i~a~ 65 (201)
T d1wy7a1 47 GKVVADLGAGTGVLSYGAL 65 (201)
T ss_dssp TCEEEEETCTTCHHHHHHH
T ss_pred CCEEEECcCcchHHHHHHH
Confidence 4689999999999887665
|
| >d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Putative methyltransferase Atu0340 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=89.21 E-value=1.3 Score=40.01 Aligned_cols=22 Identities=23% Similarity=0.300 Sum_probs=18.5
Q ss_pred CCceEEeeecCCCCcccHHHHH
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQ 83 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~ 83 (371)
.+..+|+|++|++|..|+.+..
T Consensus 131 ~~~~rVLdlf~~tG~~sl~aa~ 152 (309)
T d2igta1 131 DRPLKVLNLFGYTGVASLVAAA 152 (309)
T ss_dssp SSCCEEEEETCTTCHHHHHHHH
T ss_pred cCCCeEEEecCCCcHHHHHHHh
Confidence 3457999999999999998773
|
| >d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Putative methyltransferase SPy1538 species: Streptococcus pyogenes [TaxId: 1314]
Probab=86.06 E-value=0.36 Score=38.70 Aligned_cols=21 Identities=19% Similarity=0.164 Sum_probs=17.3
Q ss_pred CceEEeeecCCCCcccHHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAMQ 83 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~ 83 (371)
+--+|+|+|||+|..++.+++
T Consensus 14 ~g~~vlDl~~GtG~~~iea~~ 34 (152)
T d2esra1 14 NGGRVLDLFAGSGGLAIEAVS 34 (152)
T ss_dssp CSCEEEEETCTTCHHHHHHHH
T ss_pred CCCeEEEcCCccCHHHHHHHH
Confidence 346899999999998887663
|
| >d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein SMu776, middle and C-terminal domains species: Streptococcus mutans [TaxId: 1309]
Probab=85.66 E-value=0.48 Score=43.02 Aligned_cols=27 Identities=19% Similarity=0.311 Sum_probs=21.5
Q ss_pred HhhHHHHHHHHHhhcccCceEEEEecC
Q 017439 204 KNDIESFLNARAQELVPGGLLLLLTPT 230 (371)
Q Consensus 204 ~~D~~~FL~~Ra~EL~pGG~lvl~~~g 230 (371)
.+|+...++.=.+-|+|||.|++....
T Consensus 239 ~~~~~~L~~~a~~ll~pgG~l~~~scs 265 (317)
T d2b78a2 239 SKDYHKLIRQGLEILSENGLIIASTNA 265 (317)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 456666788878889999999998754
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| >d1qama_ c.66.1.24 (A:) rRNA adenine dimethylase {Bacillus subtilis, Ermc' [TaxId: 1423]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: rRNA adenine dimethylase-like domain: rRNA adenine dimethylase species: Bacillus subtilis, Ermc' [TaxId: 1423]
Probab=85.05 E-value=0.7 Score=40.06 Aligned_cols=49 Identities=24% Similarity=0.289 Sum_probs=35.7
Q ss_pred CCceEEeeecCCCCcccHHHHH------------HHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCc
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQ------------NIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNND 121 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~------------~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~ND 121 (371)
.+.-+|+|+|||+|..|..+++ ..++.+++ ++.. .+ .+.++..|.-.-|
T Consensus 20 ~~~d~VlEIGpG~G~LT~~Ll~~~~~v~avE~D~~l~~~l~~-~~~~-------~~---n~~i~~~D~l~~~ 80 (235)
T d1qama_ 20 NEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKTTEN-KLVD-------HD---NFQVLNKDILQFK 80 (235)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHH-HTTT-------CC---SEEEECCCGGGCC
T ss_pred CCCCeEEEECCCchHHHHHHHhCcCceEEEeeccchHHHHHH-Hhhc-------cc---chhhhhhhhhhcc
Confidence 4567899999999999999986 45666666 5532 33 6788887765554
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| >d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ta1320-like domain: Hypothetical protein Ta1320 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=84.36 E-value=0.18 Score=43.03 Aligned_cols=19 Identities=16% Similarity=0.104 Sum_probs=15.7
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~ 82 (371)
--+|+|+|||+|..++.+.
T Consensus 49 Gk~VLDlGcGtG~l~i~a~ 67 (197)
T d1ne2a_ 49 GRSVIDAGTGNGILACGSY 67 (197)
T ss_dssp TSEEEEETCTTCHHHHHHH
T ss_pred CCEEEEeCCCCcHHHHHHH
Confidence 4699999999998876655
|
| >d2okca1 c.66.1.45 (A:9-433) Type I restriction enzyme StySJI M protein {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: N-6 DNA Methylase-like domain: Type I restriction enzyme StySJI M protein species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=82.02 E-value=4.9 Score=37.08 Aligned_cols=22 Identities=27% Similarity=0.406 Sum_probs=19.5
Q ss_pred HHHHHHHhhcccCceEEEEecC
Q 017439 209 SFLNARAQELVPGGLLLLLTPT 230 (371)
Q Consensus 209 ~FL~~Ra~EL~pGG~lvl~~~g 230 (371)
.|+..-.+-|++||+++++++.
T Consensus 279 ~Fi~~~~~~Lk~~G~~~iI~p~ 300 (425)
T d2okca1 279 NFLQHMMLMLKTGGRAAVVLPD 300 (425)
T ss_dssp HHHHHHHHHEEEEEEEEEEEEH
T ss_pred HHHHHHHHhcCCCCeEEEEech
Confidence 3888889999999999999974
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| >d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Methyltransferase TTHA0928 species: Thermus thermophilus [TaxId: 274]
Probab=80.92 E-value=0.46 Score=39.00 Aligned_cols=19 Identities=16% Similarity=0.025 Sum_probs=15.9
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~ 82 (371)
.-+|+|+|||+|..++.++
T Consensus 42 g~~vLDl~~G~G~~~i~a~ 60 (171)
T d1ws6a1 42 RGRFLDPFAGSGAVGLEAA 60 (171)
T ss_dssp CCEEEEETCSSCHHHHHHH
T ss_pred CCeEEEeccccchhhhhhh
Confidence 4589999999999887665
|