Citrus Sinensis ID: 017456

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-
Protein Sequence
MAEMMETTKSKKTTMKIALLILNIILLAIGNCAGPLIMRLYFLHGGKRIWFSSWLETAGCPVILIPITVSYLQRRRSGTTTDHESSTSSQPSNNDDNKLILMRPPVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDRPDNESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKEARAYTLGEGKYYAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASYFYGEIKNKKKMKKREQLPETEMPIPNP
Secondary Structure (PSIPRED)
ccccccccccccccHHHHHHHHHHHHHHHHHccccEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHcccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHccccHHHHHHHHHHHHccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccc
Coil and Loop (DISEMBL)
maemmettksKKTTMKIALLILNIILLAIGNCAGPLIMRLYFLhggkriwfsswletagcpvilipITVSylqrrrsgtttdhesstssqpsnnddnklilmrppvfFASAIIGILTGLDNYLYAYGVarlpvstsSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGlhtngdrpdneSARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKEARAYTLGEGKYYAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASYFYGEIKnkkkmkkreqlpetempipnp
Flexible Loop (DISEMBL)
maemmettkskkTTMKIALLILNIILLAIGNCAGPLIMRLYFLHGGKRIWFSSWLETAGCPVILIPITVSYLQRRRSGtttdhesstssqpsnnddnkLILMRPPVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDRPDNESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKEARAYTLGEGKYYAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASYFYgeiknkkkmkkreqlpetempipnp
Low Complexity Region (SEG)
maemmettkskkttmkiallilniillaiGNCAGPLIMRLYFLHGGKRIWFSSWLETAGCPVILIPITVSYLQRRRSGTTTDHESSTSSQPSNNDDNKLILMRPPVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQlaftaafafllVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDRPDNESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKEARAYTLGEGKYYAVVVASALIWQCFFLGAIGVIYCGssllsaiiiavllPVTEILAVIFYKEKFQAEKGVSLALSLWGFASYFYGEIknkkkmkkREQLPETEMPIPNP
Disordered region (IsUnstruct)
**************MKIALLILNIILLAIGNCAGPLIMRLYFLHGGKRIWFSSWLETAGCPVILIPITVSYLQ*************************LILMRPPVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNG*******ARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKEARAYTLGEGKYYAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASYFYGEI**********************
Disordered Region (DISOPRED)
*****************ALLILNIILLAIGNCAGPLIMRLYFLHGGKRIWFSSWLETAGCPVILIPITVSYLQRRRS*******************NKLILMRPPVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVV********************GFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKEARAYTLGEGKYYAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASYFY*************************
Disordered Region (DISEMBL)
***********KTTMKIALLILNIILLAIGNCAGPLIMRLYFLHGGKRIWFSSWLETAGCPVILIPITVSYLQ*********************DDNKLILMRPPVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDRPDNESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKEARAYTLGEGKYYAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASYFYGEIKN********************
Disordered Region (DISPRO)
**********KKTTMKIALLILNIILLAIGNCAGPLIMRLYFLHGGKRIWFSSWLETAGCPVILIPITVSYLQRRR*********************KLILMRPPVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDRPDNESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKEARAYTLGEGKYYAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASYFYGEIKNKKKMK***************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSiiiiiHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAEMMETTKSKKTTMKIALLILNIILLAIGNCAGPLIMRLYFLHGGKRIWFSSWLETAGCPVILIPITVSYLQRRRSGTTTDHESSTSSQPSNNDDNKLILMRPPVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDRPDNESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKEARAYTLGEGKYYAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASYFYGEIKNKKKMKKREQLPETEMPIPNP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	371	2.2.26 [Sep-21-2011]
Q9FZ95	351	Purine permease 3 OS=Arab	yes	no	0.881	0.931	0.585	1e-117
Q9FZ96	356	Purine permease 1 OS=Arab	no	no	0.935	0.974	0.597	1e-117
Q94GB1	358	Purine permease 2 OS=Arab	no	no	0.911	0.944	0.521	1e-107
O49726	390	Probable purine permease	no	no	0.865	0.823	0.343	5e-50
O49725	390	Probable purine permease	no	no	0.870	0.828	0.329	1e-44
Q9SY29	382	Probable purine permease	no	no	0.840	0.816	0.347	1e-43
Q8RY74	377	Probable purine permease	no	no	0.830	0.816	0.347	4e-43
Q2V3H2	390	Probable purine permease	no	no	0.840	0.8	0.313	6e-37
Q9LPF6	379	Probable purine permease	no	no	0.897	0.878	0.295	5e-36
Q0WRB9	394	Probable purine permease	no	no	0.814	0.766	0.320	2e-35

>sp|Q9FZ95|PUP3_ARATH Purine permease 3 OS=Arabidopsis thaliana GN=PUP3 PE=2 SV=1

 Score =  421 bits (1083), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 199/340 (58%), Positives = 262/340 (77%), Gaps = 13/340 (3%)

Query: 18  ALLILNIILLAIGNCAGPLIMRLYFLHGGKRIWFSSWLETAGCPVILIPITVSYLQRRRS 77
           AL+I+N I+LAIGNC GPLIMRLYF +GGKRIWFS++LETAG PVI IP+  SY+ RRRS
Sbjct: 4   ALVIINCIILAIGNCGGPLIMRLYFNNGGKRIWFSTFLETAGFPVIFIPLLFSYITRRRS 63

Query: 78  GTTTDHESSTSSQPSNNDDNKLILMRPPVFFASAIIGILTGLDNYLYAYGVARLPVSTSS 137
                            D     L++P +  A+ I+GIL+G DNYLYAYG+A LPVST++
Sbjct: 64  NNV-------------GDSTSFFLIKPRLLIAAVIVGILSGFDNYLYAYGIAYLPVSTAA 110

Query: 138 LIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDRPDNESARQYLVG 197
           LIIASQLAF A F+F +VK K T +++NAV LLT+GA VLG+HT  D+P +E+ +QY+ G
Sbjct: 111 LIIASQLAFIAIFSFFMVKHKFTPFTINAVVLLTVGAAVLGMHTETDKPVHETHKQYITG 170

Query: 198 FLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQ 257
           FL+T+ AAV+Y F+LPL+EL Y++A+Q ++Y LVLE Q+++CL A++V  +GM +  DF+
Sbjct: 171 FLITVAAAVMYAFILPLVELAYQKAKQTMSYTLVLEFQLILCLLASIVSVIGMFIAGDFK 230

Query: 258 AIGKEARAYTLGEGKYYAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTEIL 317
           A+ KEAR + LGE  +Y V V SA+IWQ FFLGAIG+I+  SSL+S I+I+VLLP+TE+L
Sbjct: 231 ALPKEAREFKLGEALFYVVAVFSAIIWQGFFLGAIGLIFSTSSLVSGIMISVLLPITEVL 290

Query: 318 AVIFYKEKFQAEKGVSLALSLWGFASYFYGEIKNKKKMKK 357
           AVIFY EKFQAEKG+SLALSLWGF SYFYGEIK+ +  ++
Sbjct: 291 AVIFYHEKFQAEKGLSLALSLWGFVSYFYGEIKSGEDKRR 330

May be involved in transport of purine derivatives during pollen germination and tube elongation.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9FZ96|PUP1_ARATH Purine permease 1 OS=Arabidopsis thaliana GN=PUP1 PE=1 SV=1

 Score =  420 bits (1080), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 212/355 (59%), Positives = 270/355 (76%), Gaps = 8/355 (2%)

Query: 15  MKIALLILNIILLAIGNCAGPLIMRLYFLHGGKRIWFSSWLETAGCPVILIPITVSYLQR 74
           MK  L+I+N I+L IG C GPL+ RLYF +GGKRIWF S+L TAG P+ILIP+ VS+L  
Sbjct: 1   MKNGLIIINCIILTIGTCGGPLLTRLYFTNGGKRIWFMSFLSTAGFPIILIPLLVSFL-- 58

Query: 75  RRSGTTTDHESSTSSQPSNNDDNKLILMRPPVFFASAIIGILTGLDNYLYAYGVARLPVS 134
                +    +   +   N    KL LM  P+F AS +IG+LTGLDNYLY+YG+A LPVS
Sbjct: 59  -----SRRRSNRNPNNAENKRKTKLFLMETPLFIASIVIGLLTGLDNYLYSYGLAYLPVS 113

Query: 135 TSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDRPDNESARQY 194
           TSSLII +QLAF A FAFLLVKQK T +S+NAV LLT+G  +L LH++GD+P  ES ++Y
Sbjct: 114 TSSLIIGTQLAFNALFAFLLVKQKFTPFSINAVVLLTVGIGILALHSDGDKPAKESKKEY 173

Query: 195 LVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNK 254
           +VGFLMT+ AA+LY F+LPL+ELTYK+ARQEIT+ LVLEIQMVMCL AT  C +GM +  
Sbjct: 174 VVGFLMTVVAALLYAFILPLVELTYKKARQEITFPLVLEIQMVMCLAATFFCVIGMFIVG 233

Query: 255 DFQAIGKEARAYTLGEGK-YYAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPV 313
           DF+ I +EAR + +G    YYA++V + +IWQ FFLGAIG+++C SSL S ++I+VLLPV
Sbjct: 234 DFKVIAREAREFKIGGSVFYYALIVITGIIWQGFFLGAIGIVFCASSLASGVLISVLLPV 293

Query: 314 TEILAVIFYKEKFQAEKGVSLALSLWGFASYFYGEIKNKKKMKKREQLPETEMPI 368
           TE+ AV+ ++EKFQAEKGVSL LSLWGF SYFYGE K+ KK+  + Q PETE+PI
Sbjct: 294 TEVFAVVCFREKFQAEKGVSLLLSLWGFVSYFYGEFKSGKKVVDKPQPPETELPI 348

Proton-coupled purine transporter mediating adenine and trans-zeatin uptake. Also able to transport caffeine and adenosine. May be involved in the uptake of cytokinin, caffeine and nicotine from the xylem sap into shoot tissues.

Arabidopsis thaliana (taxid: 3702)

>sp|Q94GB1|PUP2_ARATH Purine permease 2 OS=Arabidopsis thaliana GN=PUP2 PE=1 SV=1

 Score =  389 bits (1000), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 191/366 (52%), Positives = 258/366 (70%), Gaps = 28/366 (7%)

Query: 15  MKIALLILNIILLAIGNCAGPLIMRLYFLHGGKRIWFSSWLETAGCPVILIPITVSYLQR 74
           MK  L+I+N I LAIGNC GPL+MRLYF +GG+RIWF S+L+T GCP+I  P        
Sbjct: 3   MKTVLVIINCIFLAIGNCGGPLMMRLYFQNGGERIWFPSFLQTVGCPLIFFP-------- 54

Query: 75  RRSGTTTDHESSTSSQPSNNDDNKLILMRPPVFFASAIIGILTGLDNYLYAYGVARLPVS 134
                               +     LM+PP+F A+ ++G+L G DNYLY+YG+A +PVS
Sbjct: 55  -----LLLSFLRRRRCLEEQETTPFFLMKPPLFIAAIVVGLLVGFDNYLYSYGLAYIPVS 109

Query: 135 TSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDRPDNESARQY 194
           T+SLII++QL FTA FAF +VKQK T +++NA+ LLT GAVVL L+++ D+  NE+ ++Y
Sbjct: 110 TASLIISAQLGFTALFAFFMVKQKFTPFTINAIVLLTGGAVVLALNSDSDKLANETHKEY 169

Query: 195 LVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNK 254
           +VGF+MT+GAA+LYGF+LPL+EL+YK++ Q ITY L LE QMV+C  AT VC VGM+   
Sbjct: 170 VVGFIMTLGAALLYGFILPLVELSYKKSGQRITYTLALEFQMVLCFAATCVCLVGMLAAG 229

Query: 255 DFQ-----------AIGKEARAYTLGEGKYYAVVVASALIWQCFFLGAIGVIYCGSSLLS 303
           DF+            I  EAR + LGE  YY V+V +A+IWQ FF+GAIG+I+C SSL+S
Sbjct: 230 DFKVKHALFIFKNRVIAGEARDFKLGESLYYVVIVFTAIIWQAFFVGAIGLIFCASSLVS 289

Query: 304 AIIIAVLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASYFYGEIKNKKKMKKRE---- 359
            I+++ LLPVT ILAVI ++EKFQA KGV+LALSLWG  SYFYG++K+++K K ++    
Sbjct: 290 GIMVSALLPVTVILAVICFQEKFQAGKGVALALSLWGSVSYFYGQVKSEEKTKAQDTQLS 349

Query: 360 QLPETE 365
           QLP T+
Sbjct: 350 QLPVTD 355

Mediates adenine transport. May be involved in the uptake of cytokinin analogs.

Arabidopsis thaliana (taxid: 3702)

>sp|O49726|PUP9_ARATH Probable purine permease 9 OS=Arabidopsis thaliana GN=PUP9 PE=2 SV=2

 Score =  198 bits (504), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 116/338 (34%), Positives = 187/338 (55%), Gaps = 17/338 (5%)

Query: 30  GNCAGPLIMRLYFLHGGKRIWFSSWLETAGCPVILIPITVSYLQRRRSGTTTDHESSTSS 89
           G     ++ RLY+ +GG   W ++ ++  G P IL+P                H  S  +
Sbjct: 57  GQSVATILGRLYYENGGNSKWLATVVQLVGFP-ILLPY---------------HLLSVKT 100

Query: 90  QPSNNDDNKLILMRPPVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAA 149
             +   D KL  +R        ++G+L G   YLY+ G+  LPVST SLI ASQLAFTA 
Sbjct: 101 HTTTQRDGKLTSLRNRAL-VYIVLGLLVGAACYLYSIGLLYLPVSTLSLICASQLAFTAF 159

Query: 150 FAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDRPDNESARQYLVGFLMTIGAAVLYG 209
           F++LL  QKLT   LN++FLLT+ + +L  +         +  +Y+ GF+ T+GA+  +G
Sbjct: 160 FSYLLNSQKLTPIILNSLFLLTISSTLLAFNNEESDSKKVTKGEYVKGFVCTVGASAGFG 219

Query: 210 FVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKEARAYTLG 269
            +L L +L +++  ++ T++ V+ + + M L A+ V  VG+  + +++ +  E   Y LG
Sbjct: 220 LLLSLQQLAFRKVLKKQTFSEVINMIIYMSLVASCVSVVGLFASSEWKTLSSEMENYKLG 279

Query: 270 EGKYYAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTEILAVIFYKEKFQAE 329
           +  Y   +V +A+ WQ F +G  G+I+  SSL S  I A+ LPV  ILAVI + +K    
Sbjct: 280 KVSYVMNLVWTAVTWQVFSIGCTGLIFELSSLFSNAISALGLPVVPILAVIIFHDKMNGL 339

Query: 330 KGVSLALSLWGFASYFYGEIKNKKKMKKREQLPETEMP 367
           K +S+ L++WGF SY Y +  ++  +KK  ++P TE P
Sbjct: 340 KVISMILAIWGFVSYVYQQYLDETNLKKSNEIPTTESP 377

Arabidopsis thaliana (taxid: 3702)

>sp|O49725|PUP10_ARATH Probable purine permease 10 OS=Arabidopsis thaliana GN=PUP10 PE=2 SV=2

 Score =  181 bits (458), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/340 (32%), Positives = 185/340 (54%), Gaps = 17/340 (5%)

Query: 30  GNCAGPLIMRLYFLHGGKRIWFSSWLETAGCPVILIPITVSYLQRRRSGTTTDHESSTSS 89
           G     ++ R+Y+ +GG   W ++ ++  G PV+L    +S+    ++  TTD +   +S
Sbjct: 57  GQTVATILGRVYYDNGGNSKWLATVVQLVGFPVLLPYYILSF----KTHATTDRDGKRTS 112

Query: 90  QPSNNDDNKLILMRPPVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAA 149
            P N                  ++G+L G D YLY+ G+  LPVST SLI ASQLAF A 
Sbjct: 113 -PRNR------------VLVYVVLGLLVGADCYLYSIGLLYLPVSTYSLICASQLAFNAF 159

Query: 150 FAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDRPDNESARQYLVGFLMTIGAAVLYG 209
           F++ L  QKLT   LN++FLLT+ + +L  +         +  +Y+ GF+ T+ A+  YG
Sbjct: 160 FSYFLNSQKLTPIILNSLFLLTISSTLLAFNNEETDSTKVTKGEYVKGFICTVAASAGYG 219

Query: 210 FVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKEARAYTLG 269
            VL L +L + +  ++  ++ V+++ + + L A+ V  VG+  + +++ +  E   Y  G
Sbjct: 220 LVLSLQQLAFLKVLKKQNFSEVMDMIIYVSLVASCVSVVGLFASSEWKTLSSEMDNYKHG 279

Query: 270 EGKYYAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTEILAVIFYKEKFQAE 329
           +  Y   +V +A+ WQ F +G  G+I+  SSL S  I  + LPV  ILAVI + +K    
Sbjct: 280 KVSYIMNLVWTAVTWQVFSIGGTGLIFELSSLFSNAISVLGLPVVPILAVIIFHDKMNGL 339

Query: 330 KGVSLALSLWGFASYFYGEIKNKKKMKKREQLPETEMPIP 369
           K +S+ L++WGF SY Y +  + K +KK  ++  TE P P
Sbjct: 340 KVISMILAIWGFTSYVYQQYLDDKNLKKNHEITTTESPDP 379

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SY29|PUP4_ARATH Probable purine permease 4 OS=Arabidopsis thaliana GN=PUP4 PE=2 SV=1

 Score =  177 bits (448), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 116/334 (34%), Positives = 190/334 (56%), Gaps = 22/334 (6%)

Query: 16  KIALLILNIILLAIGNCAGPLIMRLYFLHGGKRIWFSSWLETAGCPVILIPITVSYLQRR 75
            + LLI+    L  G+ A  L+ + YF++GG   W S+W+++AG P++LI I   +   +
Sbjct: 24  SLTLLIVTYFFLFFGSIASSLLAKYYFVYGGSSRWVSTWVQSAGFPLLLILIYFPHYVLK 83

Query: 76  RSGTTTDHESSTSSQPSNNDDNKLILMRPPVFFASAIIGILTGLDNYLYAYGVARLPVST 135
                     +T+ +P          +R  +F  S +IG++ G +N+L+++G + LPVST
Sbjct: 84  ----------TTTRRPFTR-----FTLRHLIF--SVLIGLVLGFNNFLFSWGTSYLPVST 126

Query: 136 SSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDRPDNESARQYL 195
           SSL++++QL FT   + ++VKQK+T  +LN V LLTL +V+L L ++ D+P   +  +Y 
Sbjct: 127 SSLLLSTQLVFTLILSRIIVKQKITFSNLNCVVLLTLSSVLLALDSSKDKPSGLTKTKYF 186

Query: 196 VGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKD 255
           +G++ TIGA +L+   LP+ E  Y   R    YA+V+E+Q+VM   AT+  T+GM     
Sbjct: 187 IGYVSTIGAGLLFALYLPVTEKLY---RTVYCYAMVMEVQLVMEFAATVFATIGMACEGG 243

Query: 256 FQAIGKEA-RAYTLGEGKYYA-VVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPV 313
           F+ + KEA   +T G   Y+   ++A+ + WQ  F    G++Y  S +   I +  LL +
Sbjct: 244 FKEMVKEANHVFTKGPTFYWTFAILANVVTWQLSFAATSGMVYLTSGITGGICMTALLAM 303

Query: 314 TEILAVIFYKEKFQAEKGVSLALSLWGFASYFYG 347
             I  V+ Y + F   K VS  L +WGF+SY YG
Sbjct: 304 NVIGGVVAYGDVFGGVKIVSTVLCIWGFSSYTYG 337

Arabidopsis thaliana (taxid: 3702)

>sp|Q8RY74|PUP21_ARATH Probable purine permease 21 OS=Arabidopsis thaliana GN=PUP21 PE=2 SV=1

 Score =  175 bits (444), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 115/331 (34%), Positives = 186/331 (56%), Gaps = 23/331 (6%)

Query: 39  RLYFLHGGKRIWFSSWLETAGCPVILIPITVSYLQRRRSGTTTDHESSTSSQPSNNDDNK 98
           RLY+ +GGK  +  + L+  G PV+++     +  R R             QP + D N 
Sbjct: 61  RLYYENGGKSTYVVTLLQLIGFPVLIL---FRFFSRIR-------------QPKSTDTN- 103

Query: 99  LILMRPPVFFASAIIGILTGLDNYLYAY----GVARLPVSTSSLIIASQLAFTAAFAFLL 154
               + P F   A + + TGL    YAY    G+  LPVST SLI+ASQLAFTA F++ L
Sbjct: 104 --FSQSPSFTTLASVYLCTGLLVSAYAYLSAVGLLYLPVSTFSLILASQLAFTAFFSYFL 161

Query: 155 VKQKLTSYSLNAVFLLTLGAVVLGLHTNGDRPDNESARQYLVGFLMTIGAAVLYGFVLPL 214
             QK T   +N++FLLT+ + +L ++T+ +   N S  QY++GF+ TIGA+   G VL L
Sbjct: 162 NSQKFTPLIVNSLFLLTVSSALLVVNTDSENTTNVSRVQYVIGFICTIGASAGIGLVLSL 221

Query: 215 MELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKEARAYTLGEGKYY 274
           ++L +++   + T + VL++     L AT V  +G+  + +++ +  E R Y LG+  Y 
Sbjct: 222 IQLLFRKVFTKHTSSAVLDLANYQSLVATCVVLIGLFASGEWRTLPSEMRNYKLGKVSYI 281

Query: 275 AVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTEILAVIFYKEKFQAEKGVSL 334
             + ++A+ WQ + +G +G+I+  SS+ S  I AV LP+  ++AVI + +K  A K  S+
Sbjct: 282 LTLASAAIFWQVYTVGCVGLIFESSSVFSNSITAVGLPIVPVVAVIVFHDKMDASKIFSI 341

Query: 335 ALSLWGFASYFYGEIKNKKKMKKREQLPETE 365
            L++WGF S+ Y    ++KK+K  +  P  E
Sbjct: 342 ILAIWGFLSFVYQHYLDEKKLKTCQTKPVEE 372

Arabidopsis thaliana (taxid: 3702)

>sp|Q2V3H2|PUP7_ARATH Probable purine permease 7 OS=Arabidopsis thaliana GN=PUP7 PE=2 SV=1

 Score =  155 bits (391), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 105/335 (31%), Positives = 182/335 (54%), Gaps = 23/335 (6%)

Query: 39  RLYFLHGGKRIWFSSWLETAGCPVILIPITVSYLQRRRSGTTTDHESSTSSQPSNNDDNK 98
           RLY+ +GG   +  + L+  G PV+++     +  R R             QP + D N 
Sbjct: 64  RLYYENGGNSTYVVTLLQLIGFPVLVL---FRFFSRIR-------------QPKSTDTN- 106

Query: 99  LILMRPPVFFASAIIGILTGLDNYLYAY----GVARLPVSTSSLIIASQLAFTAAFAFLL 154
               + P F   A + + TGL    YAY    G+  LPVST SLI+ASQLAFTA F++ L
Sbjct: 107 --FSQSPSFTTLASVYLCTGLLVSAYAYLSAVGLLYLPVSTFSLILASQLAFTAFFSYFL 164

Query: 155 VKQKLTSYSLNAVFLLTLGAVVLGLHTNGDRPDNESARQYLVGFLMTIGAAVLYGFVLPL 214
             QK T   ++++ LLT+ + +L ++T+ +   N S  QY++GF+ TIGA+   G +L L
Sbjct: 165 NSQKFTPLIVSSLLLLTVSSALLVVNTDSENSTNVSRVQYVIGFICTIGASAGIGLLLSL 224

Query: 215 MELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKEARAYTLGEGKYY 274
           +++ +++   + T + V ++ +   L A+ V  +G+  + +++ +  E R Y LG+  Y 
Sbjct: 225 IQMLFRKVFTKHTSSAVTDLAIYQSLVASCVVLIGLFASGEWETLPSEMRNYKLGKVSYV 284

Query: 275 AVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTEILAVIFYKEKFQAEKGVSL 334
             + ++A+ WQ + LG +G+I+  SS+ S  I AV LP+  + AVI + ++  A K  S+
Sbjct: 285 LTLASAAISWQVYTLGLVGLIFESSSVFSNSITAVGLPIVPVAAVIVFHDRMDASKIFSI 344

Query: 335 ALSLWGFASYFYGEIKNKKKMKKREQLPETEMPIP 369
            L++ GF S+ Y    ++KK+         ++ +P
Sbjct: 345 ILAICGFLSFVYQHYLDEKKLNTSHTSAVGDLHLP 379

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LPF6|PUP11_ARATH Probable purine permease 11 OS=Arabidopsis thaliana GN=PUP11 PE=1 SV=1

 Score =  152 bits (383), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 187/352 (53%), Gaps = 19/352 (5%)

Query: 19  LLILNIILLAIGNCAGPLIMRLYFLHGGKRIWFSSWLETAGCPVILIPITVSYLQRRRSG 78
           L+ +NI  L  G  A  L+ R Y+  GG   W ++ ++TA           ++       
Sbjct: 45  LVSVNIFFLIGGQAASVLLGRFYYDEGGNSKWMATLVQTA-----------AFPILYIPL 93

Query: 79  TTTDHESSTSSQPSNNDDNKLILMRPPVFFASAIIGILTGLDNYLYAYGVARLPVSTSSL 138
                 +S  S  S+     ++L+         ++G++   DN LY+ G+  L  ST SL
Sbjct: 94  LLLPSSASVESSESSCSLKYIVLIY-------VLLGVIIAGDNMLYSVGLLYLSASTYSL 146

Query: 139 IIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDRPDNESARQYLVGF 198
           I A+QLAF A F++ +  QK T+  LN+V LL+  A ++ L+ + D P   S  +Y+VGF
Sbjct: 147 ICATQLAFNAVFSYFINAQKFTALILNSVVLLSFSAALIALNDDADTPSGVSRSKYIVGF 206

Query: 199 LMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQA 258
           + T+ A+ LY  +L LM+ ++++  +  T+++VLE+Q+   L AT V  +G+  + +++ 
Sbjct: 207 VCTLAASALYSLLLSLMQFSFEKILKRETFSVVLEMQIYTSLVATCVSVIGLFASGEWRT 266

Query: 259 IGKEARAYTLGEGKYYAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTEILA 318
           +  E   Y  G+  Y   +V +A+ WQ   +G +G+I+  +SL S +I  + L VT + A
Sbjct: 267 LHGEMEGYHKGQASYVLTLVWTAVTWQVCSVGVVGLIFLVTSLFSNVISTLSLAVTPLAA 326

Query: 319 VIFYKEKFQAEKGVSLALSLWGFASYFY-GEIKNKKKMKKREQLPETEMPIP 369
           ++ +++K    K +++ +++WGFASY Y   I + K  + R+Q     +  P
Sbjct: 327 LVVFRDKMSGVKIMAMLIAIWGFASYVYQNHIDDLKVRQARQQAQAGRVEPP 378

Arabidopsis thaliana (taxid: 3702)

>sp|Q0WRB9|PUP8_ARATH Probable purine permease 8 OS=Arabidopsis thaliana GN=PUP8 PE=2 SV=1

 Score =  149 bits (377), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 106/331 (32%), Positives = 185/331 (55%), Gaps = 29/331 (8%)

Query: 39  RLYFLHGGKRIWFSSWLETAGCPVILIPITVSYLQRRRSGTTTDHESSTSSQPSNNDDNK 98
           R+Y+ +GGK  W  + ++  G PV+       +L R  S T        + +P+  D  K
Sbjct: 67  RVYYENGGKSTWMGTLVQLIGFPVL-------FLFRFFSQTK-------NPKPTEADFRK 112

Query: 99  LILMRPPVFFASAIIG---ILTGL----DNYLYAYGVARLPVSTSSLIIASQLAFTAAFA 151
                   F +  I+G   I+TGL    ++Y+ + G+  LPVST SLI+ASQLAFTA F+
Sbjct: 113 --------FSSFTILGSVYIVTGLLVSANSYMSSVGLLYLPVSTFSLILASQLAFTAFFS 164

Query: 152 FLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDRPDNESARQYLVGFLMTIGAAVLYGFV 211
           + L  QK T + +N++FLLT+ + +L ++T+ +     S  +Y++G + TIGA+   G +
Sbjct: 165 YFLNSQKFTPFIVNSLFLLTISSALLVVNTDSENTAKVSRVKYVIGIICTIGASAGIGLL 224

Query: 212 LPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKEARAYTLGEG 271
           L L++L  ++  ++ T++ V ++     L A+ V  +G+  + +++ +  E   Y LG+ 
Sbjct: 225 LSLVQLILRKVLKKQTFSTVTDLVAYQSLVASCVVLIGLFASGEWKTLTSEMENYKLGKV 284

Query: 272 KYYAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTEILAVIFYKEKFQAEKG 331
            Y   + + A+ WQ + +G +G+I+  SS+ S  I AV LP+  ++AVI + +K  A K 
Sbjct: 285 PYVMTLASIAISWQVYTIGVVGLIFESSSVFSNSITAVGLPIVPVVAVIVFHDKMNASKI 344

Query: 332 VSLALSLWGFASYFYGEIKNKKKMKKREQLP 362
            S+ L++WGF S+ Y    ++KK+K     P
Sbjct: 345 FSIILAIWGFISFVYQHYLDEKKLKTSHTSP 375

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	371
225459168	349	PREDICTED: purine permease 3 [Vitis vini	0.911	0.968	0.667	1e-139
255545868	356	purine transporter, putative [Ricinus co	0.932	0.971	0.663	1e-138
225459170	351	PREDICTED: purine permease 3 [Vitis vini	0.932	0.985	0.641	1e-136
224084594	344	predicted protein [Populus trichocarpa]	0.913	0.985	0.667	1e-136
225459174	351	PREDICTED: purine permease 3-like [Vitis	0.911	0.962	0.656	1e-135
449469823	363	PREDICTED: purine permease 3-like [Cucum	0.946	0.966	0.641	1e-129
357465157	440	Purine permease [Medicago truncatula] gi	0.970	0.818	0.623	1e-128
356518449	359	PREDICTED: LOW QUALITY PROTEIN: purine p	0.954	0.986	0.627	1e-127
449515488	371	PREDICTED: purine permease 3-like [Cucum	0.946	0.946	0.585	1e-127
449469825	371	PREDICTED: purine permease 3-like [Cucum	0.946	0.946	0.585	1e-126

>gi|225459168|ref|XP_002285717.1| PREDICTED: purine permease 3 [Vitis vinifera] gi|147816930|emb|CAN64392.1| hypothetical protein VITISV_015235 [Vitis vinifera]

 Score =  500 bits (1288), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 237/355 (66%), Positives = 290/355 (81%), Gaps = 17/355 (4%)

Query: 13  TTMKIALLILNIILLAIGNCAGPLIMRLYFLHGGKRIWFSSWLETAGCPVILIPITVSYL 72
           + M+ ALL+LN ++L+IGNC GP++MRLYF+ GG+RIWFSSWLETAG P+IL+P+ ++Y+
Sbjct: 7   SNMRKALLVLNCVILSIGNCGGPMVMRLYFVRGGERIWFSSWLETAGWPLILVPLIITYI 66

Query: 73  QRRRSGTTTDHESSTSSQPSNNDDNKLILMRPPVFFASAIIGILTGLDNYLYAYGVARLP 132
            RR                      KL  M+PP+F ASA+IG+LTG D+YLYAYGVA+LP
Sbjct: 67  HRRTK---------------QGSHAKLFFMKPPLFVASAVIGVLTGFDDYLYAYGVAKLP 111

Query: 133 VSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDRPDNESAR 192
           VSTS+LIIASQLAFTAAFAFLLVKQK TSYS+NA+FLL++GA VL LHT+ DRP NES +
Sbjct: 112 VSTSALIIASQLAFTAAFAFLLVKQKFTSYSVNAIFLLSIGAGVLALHTSSDRPANESNK 171

Query: 193 QYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVV 252
           +Y +GF+MT+ AA LYGF+LPL+ELTYK+A+Q ITY+LV+EIQMVMC FAT+ CTVGM+V
Sbjct: 172 EYYLGFVMTLAAAALYGFILPLVELTYKKAKQAITYSLVMEIQMVMCFFATVFCTVGMLV 231

Query: 253 NKDFQAIGKEARAYTLGEGKYYAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLP 312
           N DFQAI +EA+ Y LGE KYY VVV + +IWQCFFLGAIGVI+  SSL+  I+IAVLLP
Sbjct: 232 NNDFQAISREAKEYELGEAKYYLVVVWNGIIWQCFFLGAIGVIFSASSLVCGIVIAVLLP 291

Query: 313 VTEILAVIFYKEKFQAEKGVSLALSLWGFASYFYGEIKNKKKMKKREQLPETEMP 367
           VTEILAVIF++EKFQAEKGVSLALSLWGF SYFYGEIK+ K  KK+   PETE+P
Sbjct: 292 VTEILAVIFFQEKFQAEKGVSLALSLWGFVSYFYGEIKDSK--KKKNPTPETELP 344

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255545868|ref|XP_002513994.1| purine transporter, putative [Ricinus communis] gi|223547080|gb|EEF48577.1| purine transporter, putative [Ricinus communis]

 Score =  497 bits (1279), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 242/365 (66%), Positives = 290/365 (79%), Gaps = 19/365 (5%)

Query: 3   EMMETTKSKKTTMKIALLILNIILLAIGNCAGPLIMRLYFLHGGKRIWFSSWLETAGCPV 62
           E  +  ++  +T K ALLILN ILL+IGNC GPLIMRLYF+HGGKR+W SSWLET G P+
Sbjct: 2   ETKQEPQANTSTTKRALLILNCILLSIGNCGGPLIMRLYFIHGGKRVWLSSWLETGGWPI 61

Query: 63  ILIPITVSYLQRRRSGTTTDHESSTSSQPSNNDDNKLILMRPPVFFASAIIGILTGLDNY 122
           +LIP+ +SYL RR                S N   KL  M+P +F A+  IG+LTGLD+Y
Sbjct: 62  LLIPLFISYLHRR----------------STNPPTKLFYMKPRLFLAATFIGVLTGLDDY 105

Query: 123 LYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTN 182
           LYAYGVARLPVSTSSLIIA+QLAFTAAFAFLLVKQK TS+S+NAV LLT GA VL LHT+
Sbjct: 106 LYAYGVARLPVSTSSLIIATQLAFTAAFAFLLVKQKFTSFSINAVVLLTAGAGVLALHTS 165

Query: 183 GDRPDNESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFA 242
            DRP +ES +QY +GF+MT+ AA LYGF+LPL+ELTYK+++QEI+Y LV+EIQMVMCLFA
Sbjct: 166 SDRPGHESTKQYALGFVMTLVAAALYGFILPLVELTYKKSKQEISYTLVMEIQMVMCLFA 225

Query: 243 TLVCTVGMVVNKDFQAIGKEARAYTLGEGKYYAVVVASALIWQCFFLGAIGVIYCGSSLL 302
           T+ CT+GM+VNKDF  I +EAR + LGE KYY ++V SA+IWQCFFLGAIGVI+C SSLL
Sbjct: 226 TIFCTIGMLVNKDFNVIPREAREFGLGETKYYVILVWSAIIWQCFFLGAIGVIFCASSLL 285

Query: 303 SAIIIAVLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASYFYGEIKNKKKMKKREQLP 362
           S I+IAVLLPVTE+LAVIFY+E FQAEKGV+LALSLWGF SYFYGE+K     KK+   P
Sbjct: 286 SGILIAVLLPVTEVLAVIFYQENFQAEKGVALALSLWGFVSYFYGEVKES---KKKNLAP 342

Query: 363 ETEMP 367
            +EMP
Sbjct: 343 GSEMP 347

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225459170|ref|XP_002285718.1| PREDICTED: purine permease 3 [Vitis vinifera]

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 233/363 (64%), Positives = 289/363 (79%), Gaps = 17/363 (4%)

Query: 5   METTKSKKTTMKIALLILNIILLAIGNCAGPLIMRLYFLHGGKRIWFSSWLETAGCPVIL 64
           ME      +  + ALL+L+ ++L+IG+C GPL+MRLYF+ GG+RIWFSSWLETAG P+IL
Sbjct: 1   MEVEAQLSSNTRKALLVLSCVILSIGHCGGPLVMRLYFVRGGERIWFSSWLETAGWPLIL 60

Query: 65  IPITVSYLQRRRSGTTTDHESSTSSQPSNNDDNKLILMRPPVFFASAIIGILTGLDNYLY 124
           +P+ ++Y+ RR                      KL  M+PP+F ASA+IG+LT LD+YLY
Sbjct: 61  VPLIITYMHRRTK---------------QGSHAKLFFMKPPLFVASAVIGVLTALDDYLY 105

Query: 125 AYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGD 184
           AYGVA+LPVST +LIIASQLAFTAAFAFLLVKQK TSYS+NA+FLL++GA VL LHT+ D
Sbjct: 106 AYGVAKLPVSTIALIIASQLAFTAAFAFLLVKQKFTSYSVNAIFLLSIGAGVLALHTSSD 165

Query: 185 RPDNESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATL 244
           RP NES ++Y +GF MT+ AA LYGF+LPL+ELTYK+A+Q ITY+LV+EIQMVMC FAT 
Sbjct: 166 RPANESNKEYYLGFFMTLAAAALYGFILPLVELTYKKAKQAITYSLVMEIQMVMCFFATF 225

Query: 245 VCTVGMVVNKDFQAIGKEARAYTLGEGKYYAVVVASALIWQCFFLGAIGVIYCGSSLLSA 304
            CTVGM+VN DFQAI +EA+ Y LGE KYY VVV + ++WQCF+LGAIGVI+C SSL++ 
Sbjct: 226 FCTVGMLVNNDFQAIPREAKEYELGEAKYYLVVVWNGIMWQCFYLGAIGVIFCASSLVAG 285

Query: 305 IIIAVLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASYFYGEIKNKKKMKKREQLPET 364
           I++AVLLPVTEILAVIF+ +KFQAEKGVSLALSLWGF SYFYGEIK+ K  KK+   PET
Sbjct: 286 IVLAVLLPVTEILAVIFFHDKFQAEKGVSLALSLWGFVSYFYGEIKDSK--KKKNPTPET 343

Query: 365 EMP 367
           E+P
Sbjct: 344 ELP 346

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224084594|ref|XP_002307351.1| predicted protein [Populus trichocarpa] gi|222856800|gb|EEE94347.1| predicted protein [Populus trichocarpa]

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 239/358 (66%), Positives = 287/358 (80%), Gaps = 19/358 (5%)

Query: 15  MKIALLILNIILLAIGNCAGPLIMRLYFLHGGKRIWFSSWLETAGCPVILIPITVSYLQR 74
           MK  LLI N ++L+IGNC GPLIMRLYF+HGGKRIW S+WLET G P+ILIP+ +SY  R
Sbjct: 1   MKKTLLIFNCLILSIGNCGGPLIMRLYFIHGGKRIWLSAWLETGGWPIILIPLAISYFHR 60

Query: 75  RRSGTTTDHESSTSSQPSNNDDNKLILMRPPVFFASAIIGILTGLDNYLYAYGVARLPVS 134
           R +  TT                KL  M+PP+F A+AIIG+LTGLD+YLYAYGVARLPVS
Sbjct: 61  RATDPTT----------------KLFYMKPPLFIAAAIIGVLTGLDDYLYAYGVARLPVS 104

Query: 135 TSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDRPDNESARQY 194
           TS+LIIA+QLAFTA FAFLLVKQK TSYS+NAV LLT+GA VL +HT  D+P +ES+R+Y
Sbjct: 105 TSALIIATQLAFTAGFAFLLVKQKFTSYSINAVVLLTVGAGVLAMHTGSDKPAHESSREY 164

Query: 195 LVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNK 254
           ++GF++T+ AA LYGF++PL+ELTYK++RQE+ Y LV+EIQM+MCL AT+ CTVGM++NK
Sbjct: 165 ILGFILTLVAAALYGFIMPLVELTYKKSRQEMNYTLVMEIQMIMCLLATVFCTVGMLINK 224

Query: 255 DFQAIGKEARAYTLGEGKYYAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVT 314
           DFQAI +EAR Y LGE KYY V+V SA+IWQCFFLGAIGVI+C SSLLS III VLLP T
Sbjct: 225 DFQAIPREARNYELGEVKYYVVMVWSAIIWQCFFLGAIGVIFCASSLLSGIIITVLLPAT 284

Query: 315 EILAVIFYKEKFQAEKGVSLALSLWGFASYFYGEIKNKKKMKKREQLPETEM-PIPNP 371
           EILAVIF++EKFQ EKGV+L LSLWGF SYFYGE+K  K  KK+   PET M P  NP
Sbjct: 285 EILAVIFFQEKFQVEKGVALGLSLWGFVSYFYGEMKENK--KKKPAAPETLMAPSNNP 340

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225459174|ref|XP_002285719.1| PREDICTED: purine permease 3-like [Vitis vinifera]

 Score =  489 bits (1258), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 233/355 (65%), Positives = 288/355 (81%), Gaps = 17/355 (4%)

Query: 13  TTMKIALLILNIILLAIGNCAGPLIMRLYFLHGGKRIWFSSWLETAGCPVILIPITVSYL 72
           + M+ ALL+LN ++L+IGNC GPL+MRLYF+ GG+RIWFSSWLET G P+IL+P+ ++Y+
Sbjct: 9   SNMRKALLVLNCVILSIGNCGGPLVMRLYFVLGGERIWFSSWLETVGWPLILVPLIITYM 68

Query: 73  QRRRSGTTTDHESSTSSQPSNNDDNKLILMRPPVFFASAIIGILTGLDNYLYAYGVARLP 132
            RR   T  D  +            KL  M+PP+F ASA+IG+LTG D+YLYAYGVA+LP
Sbjct: 69  HRR---TKQDSHA------------KLFFMKPPLFVASAVIGVLTGFDDYLYAYGVAKLP 113

Query: 133 VSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDRPDNESAR 192
           VSTS+LI+ASQLAFTAAFAFLLVKQK TSYS+NA+FLL++GA VL LHT+ DRP NES +
Sbjct: 114 VSTSALIVASQLAFTAAFAFLLVKQKFTSYSVNAIFLLSIGAGVLALHTSSDRPTNESNK 173

Query: 193 QYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVV 252
           +Y +GF+MT+ AA LYGF+LPL+ELTYK+ +Q ITY+LV+EIQMVMC FAT+ CTVGM+V
Sbjct: 174 EYYLGFVMTLAAAALYGFILPLVELTYKKTKQAITYSLVMEIQMVMCFFATVFCTVGMLV 233

Query: 253 NKDFQAIGKEARAYTLGEGKYYAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLP 312
           N DFQAI +EA+ Y LGE KYY VVV + +IWQCFFL +IGVI+  SSL+  I+I VLLP
Sbjct: 234 NNDFQAISREAKEYELGEAKYYLVVVWNGIIWQCFFLVSIGVIFSASSLVCGIVITVLLP 293

Query: 313 VTEILAVIFYKEKFQAEKGVSLALSLWGFASYFYGEIKNKKKMKKREQLPETEMP 367
           VTEILAVIF++EKFQAEKGVSLALSLWGF SYFYGEIK+ K  KK+    ETE+P
Sbjct: 294 VTEILAVIFFREKFQAEKGVSLALSLWGFVSYFYGEIKDSK--KKKNPTSETELP 346

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449469823|ref|XP_004152618.1| PREDICTED: purine permease 3-like [Cucumis sativus] gi|449534185|ref|XP_004174047.1| PREDICTED: purine permease 3-like [Cucumis sativus]

 Score =  467 bits (1202), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 231/360 (64%), Positives = 278/360 (77%), Gaps = 9/360 (2%)

Query: 6   ETTKSKKTTMKIALLILNIILLAIGNCAGPLIMRLYFLHGGKRIWFSSWLETAGCPVILI 65
           E  +    ++K  LLI N  LLA+GNC GPLIMRLYF+HGGKR+W SS LET G P+I I
Sbjct: 4   EQQQQNTPSVKRTLLIFNCCLLAVGNCGGPLIMRLYFVHGGKRVWLSSCLETGGWPIIFI 63

Query: 66  PITVSYLQRRRSGTTTDHESSTSSQPSNNDDNKLILMRPPVFFASAIIGILTGLDNYLYA 125
           P+ +SY+ RRR        S  S+Q         I M+P +F ASA IGILTG D+YLYA
Sbjct: 64  PLLISYIHRRRLAALDPSGSPNSAQ--------FIFMKPRLFLASAFIGILTGFDDYLYA 115

Query: 126 YGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDR 185
           YGVARLPVSTS+LIIA QLAFTA FAFLLVKQK TSYS+NAV LLT+G  VL LHT+GDR
Sbjct: 116 YGVARLPVSTSALIIACQLAFTAGFAFLLVKQKFTSYSINAVVLLTIGGAVLALHTSGDR 175

Query: 186 PDNESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLV 245
           P  ES + Y+ GFLMT+ AAV+YGFVLPL+ELTYK+ARQ+ITY LVLE Q++M LFAT+V
Sbjct: 176 PAGESNKDYIAGFLMTVAAAVVYGFVLPLVELTYKKARQQITYTLVLEFQLIMSLFATIV 235

Query: 246 CTVGMVVNKDFQAIGKEARAYTLGEGKYYAVVVASALIWQCFFLGAIGVIYCGSSLLSAI 305
           C +GM++N DFQ I +EA A+ LG+ +YY V+V SA++WQ FFLGAIGVI+  SSL S I
Sbjct: 236 CAIGMLINNDFQVIPREAEAFGLGKFRYYLVLVLSAILWQGFFLGAIGVIFSSSSLFSGI 295

Query: 306 IIAVLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASYFYGEIK-NKKKMKKREQLPET 364
           +IAVLLPVTEILAVI + E+FQAEKGVSLAL+LWGF SYFYGEIK NK+K  + ++  ET
Sbjct: 296 VIAVLLPVTEILAVIIFNERFQAEKGVSLALNLWGFLSYFYGEIKHNKRKKLELQRYEET 355

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357465157|ref|XP_003602860.1| Purine permease [Medicago truncatula] gi|355491908|gb|AES73111.1| Purine permease [Medicago truncatula]

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 229/367 (62%), Positives = 289/367 (78%), Gaps = 7/367 (1%)

Query: 1   MAEMMETTKSKKTTMKIALLILNIILLAIGNCAGPLIMRLYFLHGGKRIWFSSWLETAGC 60
           M E  E   +KK   K  LLI+N ++LA+GN  GPLIMRLYF+HGG+R+W S+ LETAG 
Sbjct: 1   MEEGKEQQVAKKKMNKF-LLIVNCLILALGNSGGPLIMRLYFIHGGQRVWLSACLETAGF 59

Query: 61  PVILIPITVSYLQRRRSGTTTDHESSTSSQPS-NNDDNKLILMRPPVFFASAIIGILTGL 119
           P++LIP+T+SY+QR R      H+   S+  S  ++   +I M+PP+FFA+A +GILTGL
Sbjct: 60  PLMLIPLTISYIQRFRH----RHKPLPSNTISIASEKQNIISMKPPIFFAAAFVGILTGL 115

Query: 120 DNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGL 179
           D+YLYAYGVARLPVSTSSLIIASQL FTA FAFLLVKQK T++++NAVFLLT+GA VL +
Sbjct: 116 DDYLYAYGVARLPVSTSSLIIASQLGFTAFFAFLLVKQKFTAFTVNAVFLLTVGAGVLAM 175

Query: 180 HTNGDRPDNESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMC 239
           HT+ DRP   SA+QY +GF  T+ A+ LYGFVLP +EL YK+ +Q ITY+LV+E Q VMC
Sbjct: 176 HTSSDRPAGVSAKQYAIGFSTTVAASALYGFVLPAVELVYKKIKQPITYSLVMEFQFVMC 235

Query: 240 LFATLVCTVGMVVNKDFQAIGKEARAYTLGEGKYYAVVVASALIWQCFFLGAIGVIYCGS 299
           +FAT+ CT+GM++N DF+ I +EAR + LGE  YY V+V +A++WQ FFLGAIGV++C S
Sbjct: 236 MFATIFCTIGMIINNDFKMIPREARNFGLGESIYYVVLVLNAIMWQAFFLGAIGVVFCAS 295

Query: 300 SLLSAIIIAVLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASYFYGEIKNKKKMKKRE 359
           SLLS I+IAVLLP+TE+LAV+FYKEKFQAEKGVSL LSLWGF SYFYGEIK+ K  KK+ 
Sbjct: 296 SLLSGILIAVLLPLTEVLAVVFYKEKFQAEKGVSLVLSLWGFVSYFYGEIKHAKAEKKKR 355

Query: 360 QLPETEM 366
            L E EM
Sbjct: 356 SL-EIEM 361

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356518449|ref|XP_003527891.1| PREDICTED: LOW QUALITY PROTEIN: purine permease 1-like [Glycine max]

 Score =  460 bits (1183), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 229/365 (62%), Positives = 284/365 (77%), Gaps = 11/365 (3%)

Query: 1   MAEMMETTKSKKTTMKIALLILNIILLAIGNCAGPLIMRLYFLHGGKRIWFSSWLETAGC 60
           MAE          TMK  LL  N +LL IG   GPL+MRLYFLHGG R+W SS+LETAG 
Sbjct: 1   MAEGRSEEDKDDRTMKRLLLTTNCLLLTIGTSGGPLVMRLYFLHGGHRVWLSSFLETAGF 60

Query: 61  PVILIPITVSYLQRRRSGTTTDHESSTSSQPSNNDDNKLILMRPPVFFASAIIGILTGLD 120
           P++L+P+ VSYL+RRR+ +     ++ +++P      KLI M+PP+  AS  IGILTGLD
Sbjct: 61  PLMLLPLAVSYLRRRRTAS-----AAGTAKP------KLISMKPPLLAASTFIGILTGLD 109

Query: 121 NYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLH 180
           +YLYAYGVARLPVSTS+LIIA+QL FTA FAFLLV+QK T+YS+NAV +LT+GA VL LH
Sbjct: 110 DYLYAYGVARLPVSTSALIIATQLGFTAFFAFLLVRQKFTAYSINAVVMLTVGAGVLALH 169

Query: 181 TNGDRPDNESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCL 240
           T+GDRP  ES ++Y++GF+MT+ AA LYGFVLPL+EL Y++ +Q +TY+LV+EIQ VMC 
Sbjct: 170 TSGDRPPGESVKEYVMGFVMTVIAAALYGFVLPLIELVYQKXQQPLTYSLVMEIQFVMCF 229

Query: 241 FATLVCTVGMVVNKDFQAIGKEARAYTLGEGKYYAVVVASALIWQCFFLGAIGVIYCGSS 300
            ATL C +GM++N DF+ I +EA+ +  GEG YYAV+V SA+IWQ FFLGAIGVI+C SS
Sbjct: 230 SATLFCLLGMIINNDFKVIPREAKQFEHGEGSYYAVLVGSAIIWQAFFLGAIGVIFCASS 289

Query: 301 LLSAIIIAVLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASYFYGEIKNKKKMKKREQ 360
           L S I+IAVLLPVTE+LAVIFYKEKFQAEKGVSL LSLWG  SYFYGEIK+ +K KK+  
Sbjct: 290 LFSGILIAVLLPVTEVLAVIFYKEKFQAEKGVSLLLSLWGMVSYFYGEIKHSRKRKKKNS 349

Query: 361 LPETE 365
            PE E
Sbjct: 350 DPEAE 354

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449515488|ref|XP_004164781.1| PREDICTED: purine permease 3-like [Cucumis sativus]

 Score =  459 bits (1182), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 215/367 (58%), Positives = 278/367 (75%), Gaps = 16/367 (4%)

Query: 7   TTKSKKTTMKIALLILNIILLAIGNCAGPLIMRLYFLHGGKRIWFSSWLETAGCPVILIP 66
           +  ++  T++  LL  N IL++IGNC GPLI+RLYF+HGG R+W SSWL T G P+IL+P
Sbjct: 15  SNNARNPTLQRVLLAFNSILMSIGNCGGPLILRLYFIHGGNRVWLSSWLFTGGWPIILLP 74

Query: 67  ITVSYLQRRRSGTTTDHESSTSSQPSNNDDNKLILMRPPVFF-ASAIIGILTGLDNYLYA 125
           + +SY+ RRR+ T             +    KLI MR P+    SA++G+LTG+DNYL+A
Sbjct: 75  LAISYIHRRRTAT-------------DGSKTKLIFMREPLLLLGSAVVGVLTGVDNYLFA 121

Query: 126 YGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDR 185
           YG+ARLPVSTSSLIIASQLAFTA FA+LLVKQK TSY++NAV LLT+G  +L LH++GDR
Sbjct: 122 YGMARLPVSTSSLIIASQLAFTAGFAYLLVKQKFTSYTVNAVVLLTMGGAILALHSSGDR 181

Query: 186 PDNESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLV 245
           P+ E+  +Y+ GFLMT+GAAVLYG +LPL+EL YK+ +Q +TY L+LEIQ+VM +  TLV
Sbjct: 182 PEGETNGEYIAGFLMTLGAAVLYGLILPLIELMYKKTKQRLTYTLILEIQLVMAISGTLV 241

Query: 246 CTVGMVVNKDFQAIGKEARAYTLGEGKYYAVVVASALIWQCFFLGAIGVIYCGSSLLSAI 305
           CT+GM++N DFQAI +E R + LG  KYY V+V S +IWQCFF+GA+GVI+  SSL S I
Sbjct: 242 CTIGMLINNDFQAIAREGREFGLGSTKYYVVLVMSCIIWQCFFIGAVGVIFYSSSLFSGI 301

Query: 306 IIAVLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASYFYGEIKNKKKMKKRE--QLPE 363
           +IA+LLP  EILAV+F++EKFQ EKGVSLAL+LWGF SYFYGE K  KKMK +E  +   
Sbjct: 302 VIALLLPAVEILAVVFFREKFQVEKGVSLALNLWGFVSYFYGEFKQTKKMKSKELQKAQA 361

Query: 364 TEMPIPN 370
           +  PI N
Sbjct: 362 STTPIQN 368

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449469825|ref|XP_004152619.1| PREDICTED: purine permease 3-like [Cucumis sativus]

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 215/367 (58%), Positives = 278/367 (75%), Gaps = 16/367 (4%)

Query: 7   TTKSKKTTMKIALLILNIILLAIGNCAGPLIMRLYFLHGGKRIWFSSWLETAGCPVILIP 66
           +  ++  T++  LL  N IL++IGNC GPLI+RLYF+HGG R+W SSWL T G P+IL+P
Sbjct: 15  SNNARNPTLQRVLLAFNSILMSIGNCGGPLILRLYFIHGGNRVWLSSWLFTGGWPIILLP 74

Query: 67  ITVSYLQRRRSGTTTDHESSTSSQPSNNDDNKLILMRPPVFF-ASAIIGILTGLDNYLYA 125
           + +SY+ RRR+ T             +    KLI MR P+    SA++G+LTG+DNYL+A
Sbjct: 75  LAISYIHRRRTAT-------------DGTKTKLIFMREPLLLLGSAVVGVLTGVDNYLFA 121

Query: 126 YGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDR 185
           YG+ARLPVSTSSLIIASQLAFTA FA+LLVKQK TSY++NAV LLT+G  +L LH++GDR
Sbjct: 122 YGMARLPVSTSSLIIASQLAFTAGFAYLLVKQKFTSYTVNAVVLLTMGGAILALHSSGDR 181

Query: 186 PDNESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLV 245
           P+ E+  +Y+ GFLMT+GAAVLYG +LPL+EL YK+ +Q +TY L+LEIQ+VM +  TLV
Sbjct: 182 PEGETNGEYIAGFLMTLGAAVLYGLILPLIELMYKKTKQRLTYTLILEIQLVMAISGTLV 241

Query: 246 CTVGMVVNKDFQAIGKEARAYTLGEGKYYAVVVASALIWQCFFLGAIGVIYCGSSLLSAI 305
           CT+GM++N DFQAI +E R + LG  KYY V+V S +IWQCFF+GA+GVI+  SSL S I
Sbjct: 242 CTIGMLINNDFQAIAREGREFGLGSTKYYVVLVMSCIIWQCFFIGAVGVIFYSSSLFSGI 301

Query: 306 IIAVLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASYFYGEIKNKKKMKKRE--QLPE 363
           +IA+LLP  EILAV+F++EKFQ EKGVSLAL+LWGF SYFYGE K  KKMK +E  +   
Sbjct: 302 VIALLLPAVEILAVVFFREKFQVEKGVSLALNLWGFVSYFYGEFKQTKKMKSKELQKAQA 361

Query: 364 TEMPIPN 370
           +  PI N
Sbjct: 362 STTPIQN 368

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	371
TAIR|locus:2032148	356	PUP1 "AT1G28230" [Arabidopsis	0.894	0.932	0.552	1.5e-97
TAIR|locus:2032159	351	PUP3 "AT1G28220" [Arabidopsis	0.870	0.920	0.538	1.3e-91
TAIR|locus:2057666	358	PUP2 "AT2G33750" [Arabidopsis	0.870	0.902	0.490	3.8e-85
TAIR|locus:2196989	382	PUP4 "AT1G30840" [Arabidopsis	0.633	0.615	0.354	1.1e-44
TAIR|locus:2047520	361	PUP5 "AT2G24220" [Arabidopsis	0.636	0.653	0.330	1.4e-40
TAIR|locus:2194814	379	PUP11 "AT1G44750" [Arabidopsis	0.633	0.620	0.302	1.5e-39
TAIR|locus:1009023365	377	AT4G18205 "AT4G18205" [Arabido	0.789	0.777	0.305	3.9e-37
TAIR|locus:2141907	390	PUP10 "AT4G18210" [Arabidopsis	0.819	0.779	0.294	8.3e-35
TAIR|locus:2141887	387	PUP6 "AT4G18190" [Arabidopsis	0.865	0.829	0.270	2.5e-33
TAIR|locus:1009023376	394	PUP8 "AT4G18195" [Arabidopsis	0.792	0.746	0.268	5.2e-33

TAIR|locus:2032148 PUP1 "AT1G28230" [Arabidopsis thaliana (taxid:3702)]

 Score = 969 (346.2 bits), Expect = 1.5e-97, P = 1.5e-97
 Identities = 188/340 (55%), Positives = 237/340 (69%)

Query:    30 GNCAGPLIMRLYFLHGGKRIWFSSWLETAGCPVILIPITVSYLQRRRSGTTTDHESSTSS 89
             G C GPL+ RLYF +GGKRIWF S+L TAG P+ILIP+ VS+L RRRS    ++      
Sbjct:    16 GTCGGPLLTRLYFTNGGKRIWFMSFLSTAGFPIILIPLLVSFLSRRRSNRNPNNAE---- 71

Query:    90 QPSNNDDNKLILMRPPVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQXXXXXX 149
                N    KL LM  P+F AS +IG+LTGLDNYLY+YG+A LPVSTSSLII +Q      
Sbjct:    72 ---NKRKTKLFLMETPLFIASIVIGLLTGLDNYLYSYGLAYLPVSTSSLIIGTQLAFNAL 128

Query:   150 XXXXXVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDRPDNESARQYLVGFLMTIGAAVLYG 209
                  VKQK T +S+NAV LLT+G  +L LH++GD+P  ES ++Y+VGFLMT+ AA+LY 
Sbjct:   129 FAFLLVKQKFTPFSINAVVLLTVGIGILALHSDGDKPAKESKKEYVVGFLMTVVAALLYA 188

Query:   210 FVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKEARAYTLG 269
             F+LPL+ELTYK+ARQEIT+ LVLEIQMVMCL AT  C +GM +  DF+ I +EAR + +G
Sbjct:   189 FILPLVELTYKKARQEITFPLVLEIQMVMCLAATFFCVIGMFIVGDFKVIAREAREFKIG 248

Query:   270 EGK-YYAVVVASALIWQCFFLGAIGVIYCGXXXXXXXXXXXXXPVTEILAVIFYKEKFQA 328
                 YYA++V + +IWQ FFLGAIG+++C              PVTE+ AV+ ++EKFQA
Sbjct:   249 GSVFYYALIVITGIIWQGFFLGAIGIVFCASSLASGVLISVLLPVTEVFAVVCFREKFQA 308

Query:   329 EKGVSLALSLWGFASYFYGEIXXXXXXXXREQLPETEMPI 368
             EKGVSL LSLWGF SYFYGE         + Q PETE+PI
Sbjct:   309 EKGVSLLLSLWGFVSYFYGEFKSGKKVVDKPQPPETELPI 348

GO:0005345 "purine nucleobase transmembrane transporter activity" evidence=ISS;IDA

GO:0009507 "chloroplast" evidence=ISM

GO:0015931 "nucleobase-containing compound transport" evidence=ISS;IDA

GO:0016020 "membrane" evidence=IEA

GO:0005887 "integral to plasma membrane" evidence=ISS

GO:0006863 "purine nucleobase transport" evidence=RCA;IDA

GO:0010184 "cytokinin transport" evidence=IDA

GO:0015211 "purine nucleoside transmembrane transporter activity" evidence=IDA

TAIR|locus:2032159 PUP3 "AT1G28220" [Arabidopsis thaliana (taxid:3702)]

 Score = 913 (326.5 bits), Expect = 1.3e-91, P = 1.3e-91
 Identities = 182/338 (53%), Positives = 235/338 (69%)

Query:    30 GNCAGPLIMRLYFLHGGKRIWFSSWLETAGCPVILIPITVSYLQRRRSGTTTDHESSTSS 89
             GNC GPLIMRLYF +GGKRIWFS++LETAG PVI IP+  SY+ RRRS    D   STS 
Sbjct:    16 GNCGGPLIMRLYFNNGGKRIWFSTFLETAGFPVIFIPLLFSYITRRRSNNVGD---STS- 71

Query:    90 QPSNNDDNKLILMRPPVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQXXXXXX 149
                        L++P +  A+ I+GIL+G DNYLYAYG+A LPVST++LIIASQ      
Sbjct:    72 ---------FFLIKPRLLIAAVIVGILSGFDNYLYAYGIAYLPVSTAALIIASQLAFIAI 122

Query:   150 XXXXXVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDRPDNESARQYLVGFLMTIGAAVLYG 209
                  VK K T +++NAV LLT+GA VLG+HT  D+P +E+ +QY+ GFL+T+ AAV+Y 
Sbjct:   123 FSFFMVKHKFTPFTINAVVLLTVGAAVLGMHTETDKPVHETHKQYITGFLITVAAAVMYA 182

Query:   210 FVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKEARAYTLG 269
             F+LPL+EL Y++A+Q ++Y LVLE Q+++CL A++V  +GM +  DF+A+ KEAR + LG
Sbjct:   183 FILPLVELAYQKAKQTMSYTLVLEFQLILCLLASIVSVIGMFIAGDFKALPKEAREFKLG 242

Query:   270 EGKYYAVVVASALIWQCFFLGAIGVIYCGXXXXXXXXXXXXXPVTEILAVIFYKEKFQAE 329
             E  +Y V V SA+IWQ FFLGAIG+I+               P+TE+LAVIFY EKFQAE
Sbjct:   243 EALFYVVAVFSAIIWQGFFLGAIGLIFSTSSLVSGIMISVLLPITEVLAVIFYHEKFQAE 302

Query:   330 KGVSLALSLWGFASYFYGEIXXXXXXXX--REQLPETE 365
             KG+SLALSLWGF SYFYGEI          +E+  ETE
Sbjct:   303 KGLSLALSLWGFVSYFYGEIKSGEDKRRIQQEESQETE 340

GO:0005345 "purine nucleobase transmembrane transporter activity" evidence=ISS;TAS

GO:0009507 "chloroplast" evidence=ISM

GO:0015931 "nucleobase-containing compound transport" evidence=ISS;TAS

GO:0016020 "membrane" evidence=IEA;TAS

GO:0006863 "purine nucleobase transport" evidence=RCA;TAS

TAIR|locus:2057666 PUP2 "AT2G33750" [Arabidopsis thaliana (taxid:3702)]

 Score = 852 (305.0 bits), Expect = 3.8e-85, P = 3.8e-85
 Identities = 172/351 (49%), Positives = 235/351 (66%)

Query:    30 GNCAGPLIMRLYFLHGGKRIWFSSWLETAGCPVILIPITVSYLQRRRSGTTTDHESSTSS 89
             GNC GPL+MRLYF +GG+RIWF S+L+T GCP+I  P+ +S+L+RRR     + + +T  
Sbjct:    18 GNCGGPLMMRLYFQNGGERIWFPSFLQTVGCPLIFFPLLLSFLRRRRC---LEEQETT-- 72

Query:    90 QPSNNDDNKLILMRPPVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQXXXXXX 149
              P         LM+PP+F A+ ++G+L G DNYLY+YG+A +PVST+SLII++Q      
Sbjct:    73 -P-------FFLMKPPLFIAAIVVGLLVGFDNYLYSYGLAYIPVSTASLIISAQLGFTAL 124

Query:   150 XXXXXVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDRPDNESARQYLVGFLMTIGAAVLYG 209
                  VKQK T +++NA+ LLT GAVVL L+++ D+  NE+ ++Y+VGF+MT+GAA+LYG
Sbjct:   125 FAFFMVKQKFTPFTINAIVLLTGGAVVLALNSDSDKLANETHKEYVVGFIMTLGAALLYG 184

Query:   210 FVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQA----------- 258
             F+LPL+EL+YK++ Q ITY L LE QMV+C  AT VC VGM+   DF+            
Sbjct:   185 FILPLVELSYKKSGQRITYTLALEFQMVLCFAATCVCLVGMLAAGDFKVKHALFIFKNRV 244

Query:   259 IGKEARAYTLGEGKYYAVVVASALIWQCFFLGAIGVIYCGXXXXXXXXXXXXXPVTEILA 318
             I  EAR + LGE  YY V+V +A+IWQ FF+GAIG+I+C              PVT ILA
Sbjct:   245 IAGEARDFKLGESLYYVVIVFTAIIWQAFFVGAIGLIFCASSLVSGIMVSALLPVTVILA 304

Query:   319 VIFYKEKFQAEKGVSLALSLWGFASYFYGEIXXXXXXXXRE----QLPETE 365
             VI ++EKFQA KGV+LALSLWG  SYFYG++        ++    QLP T+
Sbjct:   305 VICFQEKFQAGKGVALALSLWGSVSYFYGQVKSEEKTKAQDTQLSQLPVTD 355

GO:0005345 "purine nucleobase transmembrane transporter activity" evidence=ISS;TAS

GO:0015931 "nucleobase-containing compound transport" evidence=ISS;TAS

GO:0016020 "membrane" evidence=IEA;TAS

GO:0006863 "purine nucleobase transport" evidence=TAS

TAIR|locus:2196989 PUP4 "AT1G30840" [Arabidopsis thaliana (taxid:3702)]

 Score = 391 (142.7 bits), Expect = 1.1e-44, Sum P(2) = 1.1e-44
 Identities = 85/240 (35%), Positives = 134/240 (55%)

Query:   110 SAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQXXXXXXXXXXXVKQKLTSYSLNAVFL 169
             S +IG++ G +N+L+++G + LPVSTSSL++++Q           VKQK+T  +LN V L
Sbjct:   101 SVLIGLVLGFNNFLFSWGTSYLPVSTSSLLLSTQLVFTLILSRIIVKQKITFSNLNCVVL 160

Query:   170 LTLGAVVLGLHTNGDRPDNESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYA 229
             LTL +V+L L ++ D+P   +  +Y +G++ TIGA +L+   LP+ E  Y   R    YA
Sbjct:   161 LTLSSVLLALDSSKDKPSGLTKTKYFIGYVSTIGAGLLFALYLPVTEKLY---RTVYCYA 217

Query:   230 LVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKEAR-AYTLGEGKYYA-VVVASALIWQCF 287
             +V+E+Q+VM   AT+  T+GM     F+ + KEA   +T G   Y+   ++A+ + WQ  
Sbjct:   218 MVMEVQLVMEFAATVFATIGMACEGGFKEMVKEANHVFTKGPTFYWTFAILANVVTWQLS 277

Query:   288 FLGAIGVIYCGXXXXXXXXXXXXXPVTEILAVIFYKEKFQAEKGVSLALSLWGFASYFYG 347
             F    G++Y                +  I  V+ Y + F   K VS  L +WGF+SY YG
Sbjct:   278 FAATSGMVYLTSGITGGICMTALLAMNVIGGVVAYGDVFGGVKIVSTVLCIWGFSSYTYG 337

GO:0005345 "purine nucleobase transmembrane transporter activity" evidence=ISS;TAS

GO:0015931 "nucleobase-containing compound transport" evidence=ISS;TAS

GO:0016020 "membrane" evidence=IEA;TAS

GO:0006863 "purine nucleobase transport" evidence=RCA;TAS

TAIR|locus:2047520 PUP5 "AT2G24220" [Arabidopsis thaliana (taxid:3702)]

 Score = 358 (131.1 bits), Expect = 1.4e-40, Sum P(2) = 1.4e-40
 Identities = 78/236 (33%), Positives = 122/236 (51%)

Query:   112 IIGILTGLDNYLYAYGVARLPVSTSSLIIASQXXXXXXXXXXXVKQKLTSYSLNAVFLLT 171
             ++G L+  DN +YAY  A LP STSSL+ +S            VK  L +  +N++ ++T
Sbjct:   111 VLGFLSAADNLMYAYAYAYLPASTSSLLASSSLAFSALFGYLIVKNPLNASVINSIVVIT 170

Query:   172 LGAVVLGLHTNGDRPDNESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALV 231
                 ++ L ++ DR    S  QY  GF   I  + L+G +  L EL + +     ++ + 
Sbjct:   171 GAMAIIALDSSSDRYSYISNSQYFAGFFWDIMGSALHGLIFALSELLFVKLLGRRSFHVA 230

Query:   232 LEIQMVMCLFATLVCTVGMVVNKDFQAIGKEARAYTLGEGKYYAVVVASALIWQCFFLGA 291
             LE Q+++ L A    T+GMVV+ DFQ +  EA+++  GE  Y  V+V SA+ +Q   LGA
Sbjct:   231 LEQQVMVSLTAFAFTTIGMVVSNDFQGMSHEAKSFKGGESLYTQVLVWSAVTFQLGVLGA 290

Query:   292 IGVIYCGXXXXXXXXXXXXXPVTEILAVIFYKEKFQAEKGVSLALSLWGFASYFYG 347
               V++               P+T + AVI   +     K +SL L+ WGF+SY YG
Sbjct:   291 TAVLFLASTVMAGVLNAVRVPITSVAAVILMHDPMSGFKILSLVLTFWGFSSYIYG 346

GO:0005345 "purine nucleobase transmembrane transporter activity" evidence=ISS;TAS

GO:0015931 "nucleobase-containing compound transport" evidence=ISS;TAS

GO:0016020 "membrane" evidence=IEA;TAS

GO:0006863 "purine nucleobase transport" evidence=RCA;TAS

TAIR|locus:2194814 PUP11 "AT1G44750" [Arabidopsis thaliana (taxid:3702)]

 Score = 362 (132.5 bits), Expect = 1.5e-39, Sum P(2) = 1.5e-39
 Identities = 71/235 (30%), Positives = 129/235 (54%)

Query:   112 IIGILTGLDNYLYAYGVARLPVSTSSLIIASQXXXXXXXXXXXVKQKLTSYSLNAVFLLT 171
             ++G++   DN LY+ G+  L  ST SLI A+Q             QK T+  LN+V LL+
Sbjct:   120 LLGVIIAGDNMLYSVGLLYLSASTYSLICATQLAFNAVFSYFINAQKFTALILNSVVLLS 179

Query:   172 LGAVVLGLHTNGDRPDNESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALV 231
               A ++ L+ + D P   S  +Y+VGF+ T+ A+ LY  +L LM+ ++++  +  T+++V
Sbjct:   180 FSAALIALNDDADTPSGVSRSKYIVGFVCTLAASALYSLLLSLMQFSFEKILKRETFSVV 239

Query:   232 LEIQMVMCLFATLVCTVGMVVNKDFQAIGKEARAYTLGEGKYYAVVVASALIWQCFFLGA 291
             LE+Q+   L AT V  +G+  + +++ +  E   Y  G+  Y   +V +A+ WQ   +G 
Sbjct:   240 LEMQIYTSLVATCVSVIGLFASGEWRTLHGEMEGYHKGQASYVLTLVWTAVTWQVCSVGV 299

Query:   292 IGVIYCGXXXXXXXXXXXXXPVTEILAVIFYKEKFQAEKGVSLALSLWGFASYFY 346
             +G+I+                VT + A++ +++K    K +++ +++WGFASY Y
Sbjct:   300 VGLIFLVTSLFSNVISTLSLAVTPLAALVVFRDKMSGVKIMAMLIAIWGFASYVY 354

GO:0005345 "purine nucleobase transmembrane transporter activity" evidence=ISS;TAS

GO:0009507 "chloroplast" evidence=ISM

GO:0015931 "nucleobase-containing compound transport" evidence=ISS;TAS

GO:0006863 "purine nucleobase transport" evidence=RCA;TAS

GO:0016020 "membrane" evidence=TAS

TAIR|locus:1009023365 AT4G18205 "AT4G18205" [Arabidopsis thaliana (taxid:3702)]

 Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
 Identities = 94/308 (30%), Positives = 160/308 (51%)

Query:    39 RLYFLHGGKRIWFSSWLETAGCPVILIPITVSYLQRRRSGTTTDHESSTSSQPSNNDDNK 98
             RLY+ +GGK  +  + L+  G PV+++     +  R R   +TD  ++ S  PS      
Sbjct:    61 RLYYENGGKSTYVVTLLQLIGFPVLIL---FRFFSRIRQPKSTD--TNFSQSPS------ 109

Query:    99 LILMRPPVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQXXXXXXXXXXXVKQK 158
                    V+  +   G+L     YL A G+  LPVST SLI+ASQ             QK
Sbjct:   110 -FTTLASVYLCT---GLLVSAYAYLSAVGLLYLPVSTFSLILASQLAFTAFFSYFLNSQK 165

Query:   159 LTSYSLNAVFLLTLGAVVLGLHTNGDRPDNESARQYLVGFLMTIGAAVLYGFVLPLMELT 218
              T   +N++FLLT+ + +L ++T+ +   N S  QY++GF+ TIGA+   G VL L++L 
Sbjct:   166 FTPLIVNSLFLLTVSSALLVVNTDSENTTNVSRVQYVIGFICTIGASAGIGLVLSLIQLL 225

Query:   219 YKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKEARAYTLGEGKYYAVVV 278
             +++   + T + VL++     L AT V  +G+  + +++ +  E R Y LG+  Y   + 
Sbjct:   226 FRKVFTKHTSSAVLDLANYQSLVATCVVLIGLFASGEWRTLPSEMRNYKLGKVSYILTLA 285

Query:   279 ASALIWQCFFLGAIGVIYCGXXXXXXXXXXXXXPVTEILAVIFYKEKFQAEKGVSLALSL 338
             ++A+ WQ + +G +G+I+               P+  ++AVI + +K  A K  S+ L++
Sbjct:   286 SAAIFWQVYTVGCVGLIFESSSVFSNSITAVGLPIVPVVAVIVFHDKMDASKIFSIILAI 345

Query:   339 WGFASYFY 346
             WGF S+ Y
Sbjct:   346 WGFLSFVY 353

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2141907 PUP10 "AT4G18210" [Arabidopsis thaliana (taxid:3702)]

 Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
 Identities = 94/319 (29%), Positives = 157/319 (49%)

Query:    52 SSWLETAGCPVILIPITVSY-LQRRRSGTTTDHESSTSSQPSNNDDNKLILMRPPVFFAS 110
             S WL T    ++  P+ + Y +   ++  TTD +   +S P N      +L    V+   
Sbjct:    75 SKWLATV-VQLVGFPVLLPYYILSFKTHATTDRDGKRTS-PRNR-----VL----VY--- 120

Query:   111 AIIGILTGLDNYLYAYGVARLPVSTSSLIIASQXXXXXXXXXXXVKQKLTSYSLNAVFLL 170
              ++G+L G D YLY+ G+  LPVST SLI ASQ             QKLT   LN++FLL
Sbjct:   121 VVLGLLVGADCYLYSIGLLYLPVSTYSLICASQLAFNAFFSYFLNSQKLTPIILNSLFLL 180

Query:   171 TLGAVVLGLHTNGDRPDNESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYAL 230
             T+ + +L  +         +  +Y+ GF+ T+ A+  YG VL L +L + +  ++  ++ 
Sbjct:   181 TISSTLLAFNNEETDSTKVTKGEYVKGFICTVAASAGYGLVLSLQQLAFLKVLKKQNFSE 240

Query:   231 VLEIQMVMCLFATLVCTVGMVVNKDFQAIGKEARAYTLGEGKYYAVVVASALIWQCFFLG 290
             V+++ + + L A+ V  VG+  + +++ +  E   Y  G+  Y   +V +A+ WQ F +G
Sbjct:   241 VMDMIIYVSLVASCVSVVGLFASSEWKTLSSEMDNYKHGKVSYIMNLVWTAVTWQVFSIG 300

Query:   291 AIGVIYCGXXXXXXXXXXXXXPVTEILAVIFYKEKFQAEKGVSLALSLWGFASYFYGEIX 350
               G+I+               PV  ILAVI + +K    K +S+ L++WGF SY Y +  
Sbjct:   301 GTGLIFELSSLFSNAISVLGLPVVPILAVIIFHDKMNGLKVISMILAIWGFTSYVYQQYL 360

Query:   351 XXXXXXXREQLPETEMPIP 369
                      ++  TE P P
Sbjct:   361 DDKNLKKNHEITTTESPDP 379

GO:0005345 "purine nucleobase transmembrane transporter activity" evidence=ISS;TAS

GO:0005737 "cytoplasm" evidence=ISM

GO:0015931 "nucleobase-containing compound transport" evidence=ISS;TAS

GO:0006863 "purine nucleobase transport" evidence=TAS

GO:0016020 "membrane" evidence=TAS

GO:0009624 "response to nematode" evidence=IEP

TAIR|locus:2141887 PUP6 "AT4G18190" [Arabidopsis thaliana (taxid:3702)]

 Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
 Identities = 92/340 (27%), Positives = 166/340 (48%)

Query:    30 GNCAGPLIMRLYFLHGGKRIWFSSWLETAGCPVILIPITVSYLQRRRSGTTTDHESSTSS 89
             G     L+ RLY+  GGK  W  + ++  G P+ L P    YL+   S T T  + +TSS
Sbjct:    48 GETIATLLGRLYYEKGGKSTWLETLVQLVGFPLTL-PCYY-YLKPEPSKTKTITKKTTSS 105

Query:    90 QPSNNDDNKLILMRPPVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQXXXXXX 149
                        L    V+     +G+L      LY++G+  LPVST SLI ASQ      
Sbjct:   106 ----------FLTLSLVYIG---LGLLVAGHCILYSFGLLYLPVSTFSLISASQLAFNAV 152

Query:   150 XXXXXVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDRPDNES---AR-QYLVGFLMTIGAA 205
                    QK+T + LN++ LLT+ + +L +    + P + S   A+ +Y++G++  +G++
Sbjct:   153 FSYFLNSQKITPFILNSLVLLTISSTLLVIQHEPESPSSTSKSAAKSKYVIGYICAVGSS 212

Query:   206 VLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKEARA 265
               Y  VL L +  +++  ++ T+  +L++     + AT V  VG+  +  ++ +  E   
Sbjct:   213 AGYSLVLSLTDYAFEKILKKYTFKAILDMATYPSMVATCVVVVGLFGSGGWKKLSTEMEE 272

Query:   266 YTLGEGKYYAVVVASALIWQCFFLGAIGVIYCGXXXXXXXXXXXXXPVTEILAVIFYKEK 325
             + LG+  Y  + + S + WQ   +G++G+I                PV  +LAV+F++++
Sbjct:   273 FQLGKSSYILINIGSTISWQACLIGSVGLIIEVSSLFSNVISTLCLPVVPVLAVVFFRDE 332

Query:   326 FQAEKGVSLALSLWGFASYFYGEIXXXXXXXXREQLPETE 365
                 K V++ L++WGF SY Y            ++LP+++
Sbjct:   333 MSGIKLVAMFLAIWGFVSYGYQHYVNDRKPEEDQELPQSK 372

GO:0005345 "purine nucleobase transmembrane transporter activity" evidence=ISS;TAS

GO:0015931 "nucleobase-containing compound transport" evidence=ISS;TAS

GO:0006863 "purine nucleobase transport" evidence=TAS

GO:0016020 "membrane" evidence=TAS

TAIR|locus:1009023376 PUP8 "AT4G18195" [Arabidopsis thaliana (taxid:3702)]

 Score = 360 (131.8 bits), Expect = 5.2e-33, P = 5.2e-33
 Identities = 84/313 (26%), Positives = 160/313 (51%)

Query:    36 LIMRLYFLHGGKRIWFSSWLETAGCPVILIPITVSYLQRRRSGTTTDHESSTSSQPSNND 95
             ++ R+Y+ +GGK  W  + ++  G PV+       +L R  S T        + +P+  D
Sbjct:    64 ILGRVYYENGGKSTWMGTLVQLIGFPVL-------FLFRFFSQTK-------NPKPTEAD 109

Query:    96 DNKL--ILMRPPVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQXXXXXXXXXX 153
               K     +   V+    + G+L   ++Y+ + G+  LPVST SLI+ASQ          
Sbjct:   110 FRKFSSFTILGSVYI---VTGLLVSANSYMSSVGLLYLPVSTFSLILASQLAFTAFFSYF 166

Query:   154 XVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDRPDNESARQYLVGFLMTIGAAVLYGFVLP 213
                QK T + +N++FLLT+ + +L ++T+ +     S  +Y++G + TIGA+   G +L 
Sbjct:   167 LNSQKFTPFIVNSLFLLTISSALLVVNTDSENTAKVSRVKYVIGIICTIGASAGIGLLLS 226

Query:   214 LMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKEARAYTLGEGKY 273
             L++L  ++  ++ T++ V ++     L A+ V  +G+  + +++ +  E   Y LG+  Y
Sbjct:   227 LVQLILRKVLKKQTFSTVTDLVAYQSLVASCVVLIGLFASGEWKTLTSEMENYKLGKVPY 286

Query:   274 YAVVVASALIWQCFFLGAIGVIYCGXXXXXXXXXXXXXPVTEILAVIFYKEKFQAEKGVS 333
                + + A+ WQ + +G +G+I+               P+  ++AVI + +K  A K  S
Sbjct:   287 VMTLASIAISWQVYTIGVVGLIFESSSVFSNSITAVGLPIVPVVAVIVFHDKMNASKIFS 346

Query:   334 LALSLWGFASYFY 346
             + L++WGF S+ Y
Sbjct:   347 IILAIWGFISFVY 359

GO:0005345 "purine nucleobase transmembrane transporter activity" evidence=TAS

GO:0006863 "purine nucleobase transport" evidence=TAS

GO:0015931 "nucleobase-containing compound transport" evidence=TAS

GO:0016020 "membrane" evidence=TAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9FZ95	PUP3_ARATH	No assigned EC number	0.5852	0.8814	0.9316	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00015153001 SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (341 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	371
pfam03151	149	pfam03151, TPT, Triose-phosphate Transporter famil	7e-27
pfam00892	126	pfam00892, EamA, EamA-like transporter family	3e-04
COG0697	292	COG0697, RhaT, Permeases of the drug/metabolite tr	4e-04
pfam04142	238	pfam04142, Nuc_sug_transp, Nucleotide-sugar transp	5e-04

>gnl|CDD|217390 pfam03151, TPT, Triose-phosphate Transporter family

 Score =  103 bits (260), Expect = 7e-27
 Identities = 34/151 (22%), Positives = 69/151 (45%), Gaps = 3/151 (1%)

Query: 197 GFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDF 256
           GF++ + A+ L+   L L +   K+ +   T   VLE+   +   A +V   G++ ++ F
Sbjct: 1   GFILALAASALFALRLILSQKLLKKKKG--TKLNVLELLYYLSPVAFIVLLPGLLFSEGF 58

Query: 257 QAIGKEA-RAYTLGEGKYYAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTE 315
           +           L   +Y  +++ S ++   + L A G++   S L S++   V   V  
Sbjct: 59  KLGKFILKFFGDLKTSRYVLLLLLSGVLAFLYNLSAFGLLGRTSPLTSSVAGTVKRVVVI 118

Query: 316 ILAVIFYKEKFQAEKGVSLALSLWGFASYFY 346
           +L+VI + +       + LA+++ G   Y Y
Sbjct: 119 VLSVIIFGDPVTFLNILGLAIAILGVVLYSY 149

This family includes transporters with a specificity for triose phosphate. Length = 149

>gnl|CDD|216178 pfam00892, EamA, EamA-like transporter family

 Score = 39.9 bits (94), Expect = 3e-04
 Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 1/83 (1%)

Query: 98  KLILMRPPVFFASAIIGIL-TGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVK 156
              L+      A   +G+  T L   LY Y +  +  S +S+I +    FT   + LL+ 
Sbjct: 44  PFALLSLKAILALLYLGLFGTALGYLLYFYALKYVSASNASVITSLSPVFTLILSVLLLG 103

Query: 157 QKLTSYSLNAVFLLTLGAVVLGL 179
           +KLT   L  + L+ LG +++ L
Sbjct: 104 EKLTLKQLLGIVLILLGVLLILL 126

This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Length = 126

>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

 Score = 41.4 bits (97), Expect = 4e-04
 Identities = 46/253 (18%), Positives = 87/253 (34%), Gaps = 24/253 (9%)

Query: 99  LILMRPPVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFA-FLLVKQ 157
           L     P      +  +   L   L    +     S +SLII     FTA  A  LL+ +
Sbjct: 62  LRPALRPWLLLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGE 121

Query: 158 KLTSYSLNAVFLLTLGAVVLGLHTNGDRPDNESARQYLVGFLMTIGAAVLYGFVLPLMEL 217
           +L+   +  + L   G +++ L               L+G L+ + AA+L+         
Sbjct: 122 RLSLLQILGILLALAGVLLILL------GGGGGGILSLLGLLLALAAALLWALYT----A 171

Query: 218 TYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKEARAYTLGEGKYYAVV 277
             KR  +     L L +Q+++ L   L+  +          I   A    L     Y  V
Sbjct: 172 LVKRLSRLGPVTLALLLQLLLALLLLLLFFLSGF----GAPILSRAWLLLL-----YLGV 222

Query: 278 VASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTEILAVIFYKEKFQAEKGVSLALS 337
            ++ L +  ++     +     + L A++  +      +L V+   E     + +  AL 
Sbjct: 223 FSTGLAYLLWYYALRLL----GASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALV 278

Query: 338 LWGFASYFYGEIK 350
           + G         +
Sbjct: 279 VLGVLLASLRARR 291

Length = 292

>gnl|CDD|217924 pfam04142, Nuc_sug_transp, Nucleotide-sugar transporter

 Score = 40.7 bits (96), Expect = 5e-04
 Identities = 29/118 (24%), Positives = 49/118 (41%), Gaps = 6/118 (5%)

Query: 97  NKLILMRPPVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAF--TAAFAFLL 154
           +K I   P      A+   +  L N L    ++ L  +T    +  QL    TA F+ L+
Sbjct: 7   HKAIFNNPSDTLKVAVPAFIYTLQNNLLYVALSNLDAATYQ--VTYQLKILTTALFSVLM 64

Query: 155 VKQKLTSYSLNAVFLLTLGAVVLGLHT-NGDRPDNESARQ-YLVGFLMTIGAAVLYGF 210
           + +KL+ Y   ++ LL LG  ++ L   + +      A Q   +G    + A    GF
Sbjct: 65  LGRKLSWYQWASLLLLFLGVAIVQLDQKSSETNSKRGAEQNPGLGLSAVLAACFTSGF 122

This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. Human SLC35A1 transports CMP-sialic acid, SLC35A2 transports UDP-galactose and SLC35A3 transports UDP-GlcNAc. Length = 238

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	371
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.9
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.87
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.87
PLN00411	358	nodulin MtN21 family protein; Provisional	99.86
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.86
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.79
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.78
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.76
PRK11272	292	putative DMT superfamily transporter inner membran	99.74
KOG2765	416	consensus Predicted membrane protein [Function unk	99.74
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.73
PRK15430	296	putative chloramphenical resistance permease RarD;	99.7
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	99.69
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.65
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.62
PRK11689	295	aromatic amino acid exporter; Provisional	99.61
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.49
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.42
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.4
COG2962	293	RarD Predicted permeases [General function predict	99.39
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.38
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.34
KOG1582	367	consensus UDP-galactose transporter related protei	99.24
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.21
KOG1580	337	consensus UDP-galactose transporter related protei	99.17
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.14
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.14
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.09
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	99.08
KOG1581	327	consensus UDP-galactose transporter related protei	98.93
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.84
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	98.77
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	98.71
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	98.66
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	98.55
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	98.3
KOG2766	336	consensus Predicted membrane protein [Function unk	98.25
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	98.16
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.15
PLN00411	358	nodulin MtN21 family protein; Provisional	98.06
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	98.01
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	97.99
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	97.88
COG2510	140	Predicted membrane protein [Function unknown]	97.83
PRK11689	295	aromatic amino acid exporter; Provisional	97.83
PRK10532	293	threonine and homoserine efflux system; Provisiona	97.82
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	97.78
PRK13499	345	rhamnose-proton symporter; Provisional	97.72
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	97.67
PRK11272	292	putative DMT superfamily transporter inner membran	97.58
COG2076	106	EmrE Membrane transporters of cations and cationic	97.56
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.56
PRK15430	296	putative chloramphenical resistance permease RarD;	97.51
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.51
PRK11431	105	multidrug efflux system protein; Provisional	97.51
COG2510	140	Predicted membrane protein [Function unknown]	97.51
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.49
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	97.36
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	97.33
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.31
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	97.29
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	97.17
KOG2922	335	consensus Uncharacterized conserved protein [Funct	96.92
PF13536	113	EmrE: Multidrug resistance efflux transporter	96.85
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	96.7
COG0697	292	RhaT Permeases of the drug/metabolite transporter	96.53
COG2962	293	RarD Predicted permeases [General function predict	96.53
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.38
PRK13499	345	rhamnose-proton symporter; Provisional	96.06
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	95.77
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	95.69
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	95.48
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	95.16
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	94.6
COG2076	106	EmrE Membrane transporters of cations and cationic	94.01
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	93.5
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	93.42
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	93.28
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	93.01
PRK09541	110	emrE multidrug efflux protein; Reviewed	92.5
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	92.41
PRK10650	109	multidrug efflux system protein MdtI; Provisional	92.29
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	92.25
PRK11431	105	multidrug efflux system protein; Provisional	91.51
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	90.4
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	86.49
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	85.46
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	84.01
KOG1580	337	consensus UDP-galactose transporter related protei	82.2
KOG2765	416	consensus Predicted membrane protein [Function unk	81.49
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	81.38

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.90  E-value=8.2e-21  Score=184.92  Aligned_cols=303  Identities=17%  Similarity=0.206  Sum_probs=219.2

Q ss_pred             HHHHHHhhhchHHHHHHHHHhcCCcchhHHHHHhhhchhhHHHHHHHhhhhcCC-CCCCCCCCCCCCCCCCCCCCCcccc
Q 017456           23 NIILLAIGNCAGPLIMRLYFLHGGKRIWFSSWLETAGCPVILIPITVSYLQRRR-SGTTTDHESSTSSQPSNNDDNKLIL  101 (371)
Q Consensus        23 ~~~~~~~g~~~~~Ll~r~y~~~~g~~~w~~t~vq~agfp~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  101 (371)
                      +.+.+.+=.++-+++.|+....+|.+.--+|.|..++.-++.++.+..+.+.|. .++ ..++           -++...
T Consensus        19 ~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~-~~~~-----------l~~~i~   86 (345)
T KOG2234|consen   19 SLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKK-SLKS-----------LSKEIL   86 (345)
T ss_pred             HHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhh-hhhh-----------cCHHHH
Confidence            333444445677899999999889999999999999999999998887765432 100 0010           111111


Q ss_pred             CCh-hHHHHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcc
Q 017456          102 MRP-PVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLH  180 (371)
Q Consensus       102 ~~~-~~~~~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~  180 (371)
                      -.| -.+-.++..++ ++.||.++..++.++|++|+++..|.+...|++|+.+++++|++++||.+++++++|+.++..+
T Consensus        87 ~~~~~~lk~~vPa~i-YalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~  165 (345)
T KOG2234|consen   87 AAPRETLKVSVPALI-YALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLP  165 (345)
T ss_pred             hChHHHHHHHHHHHH-HHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhcc
Confidence            223 23445555555 5555445557999999999999999999999999999999999999999999999999999854


Q ss_pred             cCCCC-CC-CcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHH-HHHHHHHHHHHHHHHHHHHHccchh
Q 017456          181 TNGDR-PD-NESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVL-EIQMVMCLFATLVCTVGMVVNKDFQ  257 (371)
Q Consensus       181 ~~s~~-~~-~~s~~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vl-e~q~~~slvat~~~~vg~~~~g~~~  257 (371)
                      ..+.. +. +....+...|+...++++.++|+-.+    .+||+.|+...+.++ .+|.  ++++.++.+++.... |++
T Consensus       166 ~~~~~~a~~~~~~~n~~~G~~avl~~c~~SgfAgv----YfEkiLK~s~~s~wi~NiqL--~~~g~~f~~l~~~~~-d~~  238 (345)
T KOG2234|consen  166 SLSPTGAKSESSAQNPFLGLVAVLVACFLSGFAGV----YFEKILKGSNVSLWIRNIQL--YFFGILFNLLTILLQ-DGE  238 (345)
T ss_pred             CCCCCCccCCCcccchhhhHHHHHHHHHHHHHHHH----HHHHHHhcCCchHHHHHHHH--HHHHHHHHHHHHhhc-ccc
Confidence            43221 12 34567789999999999999999555    567776665555555 6775  467888888888777 555


Q ss_pred             hhhhhhhhhccccchhHHHHHHHHHHHHHHHHhhhhh-hhhchhhHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHH
Q 017456          258 AIGKEARAYTLGEGKYYAVVVASALIWQCFFLGAIGV-IYCGSSLLSAIIIAVLLPVTEILAVIFYKEKFQAEKGVSLAL  336 (371)
Q Consensus       258 ~l~~e~~~f~~g~~~y~~~lv~~av~~q~~~~g~~Gl-v~~~ssl~~~vv~t~~lPvt~ilavl~fge~~t~~k~ig~~L  336 (371)
                      ...  ..+|++|....    +|..+..++..=-++.+ +.+++++.+++..++.+.+++++++.+|+-++|..-.+|..+
T Consensus       239 ~i~--~~gff~G~s~~----vw~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~l  312 (345)
T KOG2234|consen  239 AIN--EYGFFYGYSSI----VWLVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALL  312 (345)
T ss_pred             ccc--cCCccccccHH----HHHHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHH
Confidence            555  45788886433    33333333322113334 448999999999888888899999999999999999999999


Q ss_pred             HHHHHHHHHhccccc
Q 017456          337 SLWGFASYFYGEIKN  351 (371)
Q Consensus       337 vl~G~~~y~y~~~~~  351 (371)
                      ++.....|.+.+++|
T Consensus       313 Vi~Si~lY~~~P~~~  327 (345)
T KOG2234|consen  313 VILSIFLYSLYPARD  327 (345)
T ss_pred             HHHHHHHhhcCCccc
Confidence            996666666555555

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.87  E-value=6.1e-20  Score=180.81  Aligned_cols=240  Identities=17%  Similarity=0.246  Sum_probs=170.3

Q ss_pred             ChhHHHHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccC
Q 017456          103 RPPVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTN  182 (371)
Q Consensus       103 ~~~~~~~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~  182 (371)
                      .++.+.-|+.+|++-...|++...|++|+++++.+++.++..+|++++|++++|+|+++.|+.|+++.+.|++++...|.
T Consensus        75 ~~~~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~  154 (334)
T PF06027_consen   75 LKRPWWKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDV  154 (334)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecc
Confidence            34667889999999999999999999999999999999999999999999999999999999999999999988887765


Q ss_pred             CCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHccchhhhhhh
Q 017456          183 GDRPDNESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKE  262 (371)
Q Consensus       183 s~~~~~~s~~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~vg~~~~g~~~~l~~e  262 (371)
                      ..++++.++.+...||+++++|+++||++-.+.|+..    |+.+   ..|+..+.+++++++..+-..+- |++.+   
T Consensus       155 ~~~~~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v----~~~~---~~~~lg~~Glfg~ii~~iq~~il-e~~~i---  223 (334)
T PF06027_consen  155 LSGSDSSSGSNPILGDLLALLGAILYAVSNVLEEKLV----KKAP---RVEFLGMLGLFGFIISGIQLAIL-ERSGI---  223 (334)
T ss_pred             cccccCCCCCccchhHHHHHHHHHHHHHHHHHHHHhc----ccCC---HHHHHHHHHHHHHHHHHHHHHhe-ehhhh---
Confidence            4322223445679999999999999999777765544    3333   34777777888887776544332 33333   


Q ss_pred             hhhhccccchhHHHHHHHHHHHHHHHHhhhhhhhhchhhHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHH
Q 017456          263 ARAYTLGEGKYYAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFA  342 (371)
Q Consensus       263 ~~~f~~g~~~y~~~lv~~av~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPvt~ilavl~fge~~t~~k~ig~~Lvl~G~~  342 (371)
                       +.+++.+ ......++.+++-.+.+..+.-+...+++...|+-....-|.+.+..+++||+++++..++|.++++.|+.
T Consensus       224 -~~~~w~~-~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~v  301 (334)
T PF06027_consen  224 -ESIHWTS-QVIGLLVGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFV  301 (334)
T ss_pred             -hccCCCh-hhHHHHHHHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhh
Confidence             1222111 11122222222222222222222233444333333223336677999999999999999999999999999


Q ss_pred             HHHhccccchhhh
Q 017456          343 SYFYGEIKNKKKM  355 (371)
Q Consensus       343 ~y~y~~~~~~~k~  355 (371)
                      .|...+-++++++
T Consensus       302 vy~~~~~~~~~~~  314 (334)
T PF06027_consen  302 VYNLAESPEEEAR  314 (334)
T ss_pred             eEEccCCcccccc
Confidence            9988876655433

Some of the sequences in this family are annotated as putative membrane proteins.

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.87  E-value=8.7e-20  Score=177.55  Aligned_cols=283  Identities=15%  Similarity=0.165  Sum_probs=208.9

Q ss_pred             HHHHHHHHHhcCCc-chhHHHHHhhhchhhHHHHHHHhhhhcCCCCCCCCCCCCCCCCCCCCCCCccccCChhHHHHHHH
Q 017456           34 GPLIMRLYFLHGGK-RIWFSSWLETAGCPVILIPITVSYLQRRRSGTTTDHESSTSSQPSNNDDNKLILMRPPVFFASAI  112 (371)
Q Consensus        34 ~~Ll~r~y~~~~g~-~~w~~t~vq~agfp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  112 (371)
                      +.+..+..-.+.++ ..|.-|++|-+--.+...+.... .++++.                 ++.|   .  +   -++.
T Consensus        16 g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~-~~~~~~-----------------~~~~---~--~---~~~~   69 (303)
T PF08449_consen   16 GILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSL-FKFPKS-----------------RKIP---L--K---KYAI   69 (303)
T ss_pred             HHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHh-ccccCC-----------------CcCh---H--H---HHHH
Confidence            34555555555555 69999999995555433322221 110000                 0111   1  2   4456


Q ss_pred             HHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccCCCCCCCc-ch
Q 017456          113 IGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDRPDNE-SA  191 (371)
Q Consensus       113 ~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~s~~~~~~-s~  191 (371)
                      .+++..+...+-..+++|+|.+++.++.++.++++++++++++|+|++++++.++++.++|+++...++.+++++.. .+
T Consensus        70 ~~~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~  149 (303)
T PF08449_consen   70 LSFLFFLASVLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSS  149 (303)
T ss_pred             HHHHHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccccccccccccc
Confidence            67777888888888999999999999999999999999999999999999999999999999998877765443222 22


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHH--ccchhhhhhhhhhhccc
Q 017456          192 RQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVV--NKDFQAIGKEARAYTLG  269 (371)
Q Consensus       192 ~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~vg~~~--~g~~~~l~~e~~~f~~g  269 (371)
                      .....|+++.+.+.++.|+...+.|+.+++..++     ..|+.+|.++++.+.+.+....  .||+.+-    ..+...
T Consensus       150 ~~~~~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~-----~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~----~~f~~~  220 (303)
T PF08449_consen  150 FSSALGIILLLLSLLLDAFTGVYQEKLFKKYGKS-----PWELMFYTNLFSLPFLLILLFLLPTGEFRSA----IRFISA  220 (303)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-----HHHHHHHHHHHHHHHHHHHHHHHHhhHhhHH----HHHHHH
Confidence            2234499999999999999999999999887332     2699999999999988877777  6665421    112111


Q ss_pred             cchhHHHHHHHHHHHHHHHHhhhhhhhhchhhHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHhccc
Q 017456          270 EGKYYAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASYFYGEI  349 (371)
Q Consensus       270 ~~~y~~~lv~~av~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPvt~ilavl~fge~~t~~k~ig~~Lvl~G~~~y~y~~~  349 (371)
                      ....+..+..+.++-..+..++..++...+++..+++.+.+++++.++++++||+++++.+++|.++++.|...|.+.++
T Consensus       221 ~p~~~~~l~~~s~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~  300 (303)
T PF08449_consen  221 HPSVLLYLLLFSLTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKK  300 (303)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhc
Confidence            11122223444444445555566677788899999999999999999999999999999999999999999999988876


Q ss_pred             cc
Q 017456          350 KN  351 (371)
Q Consensus       350 ~~  351 (371)
                      ++
T Consensus       301 k~  302 (303)
T PF08449_consen  301 KK  302 (303)
T ss_pred             cC
Confidence            54

; GO: 0055085 transmembrane transport

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.86  E-value=5.2e-19  Score=176.35  Aligned_cols=289  Identities=14%  Similarity=0.146  Sum_probs=175.0

Q ss_pred             hchHHHHHHHHHhcCCcchhHHHHHhhhchhhHHHHHHHhhhhcCCCCCCCCCCCCCCCCCCCCCCCccccCChhHHHHH
Q 017456           31 NCAGPLIMRLYFLHGGKRIWFSSWLETAGCPVILIPITVSYLQRRRSGTTTDHESSTSSQPSNNDDNKLILMRPPVFFAS  110 (371)
Q Consensus        31 ~~~~~Ll~r~y~~~~g~~~w~~t~vq~agfp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  110 (371)
                      ..+-.++.|.-+++|=+..-+..+=...+..+++ |+.+.  ++|+.     .            .+   ..++|.+...
T Consensus        25 ~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll-~~~~~--~~~~~-----~------------~~---~~~~~~~~~l   81 (358)
T PLN00411         25 VVGISTLFKVATSKGLNIYPFLGYSYLLASLLLL-PSLFF--TNRSR-----S------------LP---PLSVSILSKI   81 (358)
T ss_pred             HHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHH-HHHHH--HHHhc-----c------------cC---cchHHHHHHH
Confidence            3355677888786666665555443343333332 22222  22111     0            01   1234555566


Q ss_pred             HHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHH------hccccchhHHHHHHHHHHHHHHHhcccCCC
Q 017456          111 AIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLL------VKQKLTSYSLNAVFLLTLGAVVLGLHTNGD  184 (371)
Q Consensus       111 ~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~------~kek~t~~~i~~vvLl~~Ga~ll~~~~~s~  184 (371)
                      +++|++-...+.++.+|++|+|++.++++.+++|+|++++++++      +|||.+++++.|++++++|+.++..+++.+
T Consensus        82 ~l~g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~  161 (358)
T PLN00411         82 GLLGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPR  161 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcc
Confidence            66776554556677789999999999999999999999999999      699999999999999999998877533210


Q ss_pred             ---------------C-CCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHH-
Q 017456          185 ---------------R-PDNESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCT-  247 (371)
Q Consensus       185 ---------------~-~~~~s~~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~-  247 (371)
                                     + +...+..+..+|++++++|+++||+|..+.++..+|+    +.  ...+.+|.++++.+++. 
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~----~~--~~~~t~~~~~~~~~~~~~  235 (358)
T PLN00411        162 VFVASSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEY----PA--AFTVSFLYTVCVSIVTSM  235 (358)
T ss_pred             cccccccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----Cc--HhHHHHHHHHHHHHHHHH
Confidence                           0 0111122346799999999999999998875554433    32  23555666666665555 


Q ss_pred             HHHHHccc-hhhhhhhhhhhccccchhHHHHHHHHHHHHHHHHhhhhhhhhchhhHHHHHHHHHHHHHH-HHHHHHhCCC
Q 017456          248 VGMVVNKD-FQAIGKEARAYTLGEGKYYAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTE-ILAVIFYKEK  325 (371)
Q Consensus       248 vg~~~~g~-~~~l~~e~~~f~~g~~~y~~~lv~~av~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPvt~-ilavl~fge~  325 (371)
                      .+...+++ .+...... +..... ..+..+ .+.+.|.+...++.-+    +...++.. ....|+.+ +++++++||+
T Consensus       236 ~~l~~~~~~~~~~~~~~-~~~~~~-i~y~~i-~t~lay~lw~~~v~~~----ga~~as~~-~~L~PV~a~llg~l~LgE~  307 (358)
T PLN00411        236 IGLVVEKNNPSVWIIHF-DITLIT-IVTMAI-ITSVYYVIHSWTVRHK----GPLYLAIF-KPLSILIAVVMGAIFLNDS  307 (358)
T ss_pred             HHHHHccCCcccceecc-chHHHH-HHHHHH-HHHHHHHHHHHHHhcc----CchHHHHH-HhHHHHHHHHHHHHHhCCC
Confidence            45554432 11110000 000000 111112 2333443332332222    12122333 24459866 9999999999


Q ss_pred             CchhHHHHHHHHHHHHHHHHhccccchhhhh
Q 017456          326 FQAEKGVSLALSLWGFASYFYGEIKNKKKMK  356 (371)
Q Consensus       326 ~t~~k~ig~~Lvl~G~~~y~y~~~~~~~k~~  356 (371)
                      +++.+++|+++++.|+.....++-+|+|.++
T Consensus       308 lt~~~~iG~~LIl~Gv~l~~~~~~~~~~~~~  338 (358)
T PLN00411        308 LYLGCLIGGILITLGFYAVMWGKANEEKDQL  338 (358)
T ss_pred             CcHHHHHHHHHHHHHHHHHHhhhhhhhhhcc
Confidence            9999999999999999887765544444433

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.86  E-value=2.3e-19  Score=173.96  Aligned_cols=231  Identities=10%  Similarity=0.099  Sum_probs=158.0

Q ss_pred             CChhHHHHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhccc
Q 017456          102 MRPPVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHT  181 (371)
Q Consensus       102 ~~~~~~~~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~  181 (371)
                      ++++++...+..|++.+.+..+..+|++|+|+++++++.+++|+|+++++++++|||++++++.|+++.++|+++...+ 
T Consensus        60 ~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~-  138 (302)
T TIGR00817        60 ISSALLKLLLPVAIVHTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDT-  138 (302)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCC-
Confidence            4567777888899988899999999999999999999999999999999999999999999999999999999765411 


Q ss_pred             CCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHccchhhhhh
Q 017456          182 NGDRPDNESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGK  261 (371)
Q Consensus       182 ~s~~~~~~s~~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~vg~~~~g~~~~l~~  261 (371)
                      +.        .....|++++++|++.|++|..+.++..++.  +.   ...++..|....+.++++...+..++.+..+.
T Consensus       139 ~~--------~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~--~~---~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~  205 (302)
T TIGR00817       139 EL--------SFNWAGFLSAMISNITFVSRNIFSKKAMTIK--SL---DKTNLYAYISIMSLFLLSPPAFITEGPPFLPH  205 (302)
T ss_pred             cc--------cccHHHHHHHHHHHHHHHHHHHHHHHhhccC--CC---CcccHHHHHHHHHHHHHHHHHHHHcchHHHHH
Confidence            11        1135799999999999999888865543310  21   22466677777777666654444333222222


Q ss_pred             hhhhhc--cc-cchhHHHHHHHHHHHHHHHHhhhhhhhhchhhHHHHHHHHHHHHHH-HHHHHHhCCCCchhHHHHHHHH
Q 017456          262 EARAYT--LG-EGKYYAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTE-ILAVIFYKEKFQAEKGVSLALS  337 (371)
Q Consensus       262 e~~~f~--~g-~~~y~~~lv~~av~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPvt~-ilavl~fge~~t~~k~ig~~Lv  337 (371)
                      +.....  .. ...+...++.....+........-.+..+++...++..... |+.. +++++++||+++..+++|++++
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~-pv~~~~~~~~~lge~lt~~~~~G~~li  284 (302)
T TIGR00817       206 GFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMK-RVVVIVVSILFFGTKISPQQVFGTGIA  284 (302)
T ss_pred             HHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhh-hhheeeeehhhcCCCCchhHHHHHHHH
Confidence            221110  01 01121122222211111111111123355666667774444 8866 9999999999999999999999


Q ss_pred             HHHHHHHHhc
Q 017456          338 LWGFASYFYG  347 (371)
Q Consensus       338 l~G~~~y~y~  347 (371)
                      +.|+..|.+.
T Consensus       285 l~Gv~l~~~~  294 (302)
T TIGR00817       285 IAGVFLYSRV  294 (302)
T ss_pred             HHHHHHHHHH
Confidence            9999887653

specificities overlap.

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.79  E-value=2e-17  Score=156.84  Aligned_cols=221  Identities=24%  Similarity=0.309  Sum_probs=163.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccCC
Q 017456          104 PPVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNG  183 (371)
Q Consensus       104 ~~~~~~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~s  183 (371)
                      +|+.+.++.=.++++.+|.+...+++++|++++.++.|++.++|++++++++|+|++++||.|++++++|+++...++..
T Consensus        14 ~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~   93 (244)
T PF04142_consen   14 PKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ   93 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence            47777777778888888777778999999999999999999999999999999999999999999999999988765543


Q ss_pred             CC--C-CC-----cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchh-HHHHHHHHHHHHHHHHHHHHHHHcc
Q 017456          184 DR--P-DN-----ESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYA-LVLEIQMVMCLFATLVCTVGMVVNK  254 (371)
Q Consensus       184 ~~--~-~~-----~s~~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~-~vle~q~~~slvat~~~~vg~~~~g  254 (371)
                      ++  + ++     ..+.+...|++++++++.+.|+-.++.|+..|+    ...+ .+-++|.  ++.+.++.++..... 
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~----~~~s~~~~N~qL--~~~gi~~~~~~~~~~-  166 (244)
T PF04142_consen   94 SSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKR----SNVSLWIQNMQL--YLFGILFNLLALLLS-  166 (244)
T ss_pred             ccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcc----cchhHHHHHHHH--HHHHHHHHHHHHhcc-
Confidence            21  1 11     123467899999999999999988887666654    2222 2335555  455666666555444 


Q ss_pred             chhhhhhhhhhhccccchhHHHHHHHHH-HHHHHHHhhhhhhhhchhhHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHH
Q 017456          255 DFQAIGKEARAYTLGEGKYYAVVVASAL-IWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTEILAVIFYKEKFQAEKGVS  333 (371)
Q Consensus       255 ~~~~l~~e~~~f~~g~~~y~~~lv~~av-~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPvt~ilavl~fge~~t~~k~ig  333 (371)
                      |++...+  ++|++|....    +|..+ ...+.++.+.-+..+.+++.+++...+.+.++.++++++||.+++..-.+|
T Consensus       167 ~~~~~~~--~g~f~G~~~~----~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg  240 (244)
T PF04142_consen  167 DGSAISE--SGFFHGYSWW----VWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLG  240 (244)
T ss_pred             ccccccc--CCchhhcchH----HHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhh
Confidence            4433332  3566664322    23332 233334445556669999999999999989999999999999999998888


Q ss_pred             HHHH
Q 017456          334 LALS  337 (371)
Q Consensus       334 ~~Lv  337 (371)
                      ..++
T Consensus       241 ~~~V  244 (244)
T PF04142_consen  241 AALV  244 (244)
T ss_pred             eecC
Confidence            7653

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.78  E-value=5.5e-16  Score=154.17  Aligned_cols=293  Identities=14%  Similarity=0.060  Sum_probs=175.0

Q ss_pred             HHHHHHHHHHhhhchHHHHHHHHHhcCCcchhHHHHHhhh-chhhHHHHHHHhhhhcCCCCCCCCCCCCCCCCCCCCCCC
Q 017456           19 LLILNIILLAIGNCAGPLIMRLYFLHGGKRIWFSSWLETA-GCPVILIPITVSYLQRRRSGTTTDHESSTSSQPSNNDDN   97 (371)
Q Consensus        19 ~~~~~~~~~~~g~~~~~Ll~r~y~~~~g~~~w~~t~vq~a-gfp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   97 (371)
                      .+.+.++.--..+....+..|.-.++ -+-+|.-++.|-. ++-+..+...+   +.++.                   +
T Consensus        49 ~~~~~~~~wy~~s~~~~~~nK~vl~~-~~~P~~l~~~~~~~~~l~~~~~~~~---~~~~~-------------------~  105 (350)
T PTZ00343         49 KLALLFLTWYALNVLYVVDNKLALNM-LPLPWTISSLQLFVGWLFALLYWAT---GFRKI-------------------P  105 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHh-CChhHHHHHHHHHHHHHHHHHHHHh---CCCCC-------------------C
Confidence            33334444444555666666665544 3448888888863 34332222111   11111                   0


Q ss_pred             ccccCChhHHHHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHH
Q 017456           98 KLILMRPPVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVL  177 (371)
Q Consensus        98 ~~~~~~~~~~~~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll  177 (371)
                      ++ ...++.+.-.+..|++....+.....|++++|++.++++.++.|+|+++++++++|||++++++.++++.++|+.+.
T Consensus       106 ~~-~~~~~~~~~llp~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~  184 (350)
T PTZ00343        106 RI-KSLKLFLKNFLPQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALA  184 (350)
T ss_pred             CC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHhe
Confidence            00 00112333344445443333333347999999999999999999999999999999999999999999999998887


Q ss_pred             hcccCCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHH-Hccch
Q 017456          178 GLHTNGDRPDNESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMV-VNKDF  256 (371)
Q Consensus       178 ~~~~~s~~~~~~s~~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~vg~~-~~g~~  256 (371)
                      ..++.         .....|++++++|++.+++|..+.++..++...+..-....++..+..+++.+.++...+ .++. 
T Consensus       185 ~~~~~---------~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~-  254 (350)
T PTZ00343        185 SVKEL---------HFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGK-  254 (350)
T ss_pred             ecccc---------hhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhH-
Confidence            63211         114689999999999999999998777654321100112234444445666655553333 3331 


Q ss_pred             hhhhhhhh----hhcc-ccchhHHHHHHHHHHHHHHHHhhhhhhhhchhhHHHHHHHHHHHHHH-HHHHHHhCCCCchhH
Q 017456          257 QAIGKEAR----AYTL-GEGKYYAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTE-ILAVIFYKEKFQAEK  330 (371)
Q Consensus       257 ~~l~~e~~----~f~~-g~~~y~~~lv~~av~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPvt~-ilavl~fge~~t~~k  330 (371)
                       .......    .+.. ........++.+.+.+.+.-....-.+..++.+..++...+. |++. +++++++||+++..+
T Consensus       255 -~~~~~~~~~~~~~~~~~~~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk-~V~~iv~s~l~~ge~lt~~~  332 (350)
T PTZ00343        255 -KWVPVWTNYTANMTNYTKGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLK-RVVIIVSSIIIFQTQVTLLG  332 (350)
T ss_pred             -HHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHH-HHHHhhhhHHHhCCCCchHh
Confidence             1111000    0100 100111123333333333222222233455666677776655 7755 999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhc
Q 017456          331 GVSLALSLWGFASYFYG  347 (371)
Q Consensus       331 ~ig~~Lvl~G~~~y~y~  347 (371)
                      ++|+++++.|+..|.+-
T Consensus       333 ~iG~~lii~Gv~lYs~~  349 (350)
T PTZ00343        333 YLGMAVAILGALLYSLF  349 (350)
T ss_pred             HHHHHHHHHHHHHHhhc
Confidence            99999999999888653

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.76  E-value=7.7e-16  Score=144.98  Aligned_cols=204  Identities=18%  Similarity=0.177  Sum_probs=139.4

Q ss_pred             HHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccCCCCCCCcchhhh
Q 017456          115 ILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDRPDNESARQY  194 (371)
Q Consensus       115 ~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~s~~~~~~s~~~~  194 (371)
                      +..++++.+|.+|++|+|+++.+++.+++|+++++++.+++|||++++++.+++++++|+.++..+++.        +.+
T Consensus        55 ~~~~l~~~~~~~a~~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~--------~~~  126 (260)
T TIGR00950        55 LQIGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNL--------SIN  126 (260)
T ss_pred             HHHHHHHHHHHHHHHhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcc--------ccc
Confidence            445788889989999999999999999999999999999999999999999999999999887633211        124


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHccchhhhhhhhhhhccccchhH
Q 017456          195 LVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKEARAYTLGEGKYY  274 (371)
Q Consensus       195 ~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~vg~~~~g~~~~l~~e~~~f~~g~~~y~  274 (371)
                      ..|+++++.|++.|+.+..+.++..+    +.+.. ...+..|...++.+++..-....++.+..  +.+.+   ....+
T Consensus       127 ~~G~~~~l~a~~~~a~~~~~~k~~~~----~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~---~~~~~  196 (260)
T TIGR00950       127 PAGLLLGLGSGISFALGTVLYKRLVK----KEGPE-LLQFTGWVLLLGALLLLPFAWFLGPNPQA--LSLQW---GALLY  196 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhHHhh----cCCch-HHHHHHHHHHHHHHHHHHHHHhcCCCCCc--chHHH---HHHHH
Confidence            68999999999999998888644433    22211 12222244556666655444444432211  11111   00112


Q ss_pred             HHHHHHHHHHHHHHHhhhhhhhhchhhHHHHHHHHHHHH-HHHHHHHHhCCCCchhHHHHHHHHHHHH
Q 017456          275 AVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPV-TEILAVIFYKEKFQAEKGVSLALSLWGF  341 (371)
Q Consensus       275 ~~lv~~av~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPv-t~ilavl~fge~~t~~k~ig~~Lvl~G~  341 (371)
                      ..++.+.+.+.+...++.-    .+....+++.... |+ +.+++++++||+++..+++|+++++.|.
T Consensus       197 ~~~~~~~~~~~~~~~a~~~----~~~~~~s~~~~~~-pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       197 LGLIGTALAYFLWNKGLTL----VDPSAASILALAE-PLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHHHHHHHhc----CCchHHHHHHHHH-HHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            2234455555555444322    2332344554455 76 4599999999999999999999999875

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.74  E-value=5.5e-15  Score=142.94  Aligned_cols=280  Identities=14%  Similarity=0.114  Sum_probs=167.9

Q ss_pred             hhHHHHHHHHHHHHHhhhchHHHHHHHHHhcCCcchhHHHHHhhhchhhHHHHHHHhhhhcCCCCCCCCCCCCCCCCCCC
Q 017456           14 TMKIALLILNIILLAIGNCAGPLIMRLYFLHGGKRIWFSSWLETAGCPVILIPITVSYLQRRRSGTTTDHESSTSSQPSN   93 (371)
Q Consensus        14 ~~~~~~~~~~~~~~~~g~~~~~Ll~r~y~~~~g~~~w~~t~vq~agfp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (371)
                      .|+.+-+++..+++.+=-..+.+..|.-.+ +=+-.++.++=...+..+++ |++..   ++++                
T Consensus         3 ~~~~~~~~~~~~~~~~iWg~~~~~~K~~~~-~~~p~~~~~~R~~~a~l~ll-~~~~~---~~~~----------------   61 (292)
T PRK11272          3 FRQLLPLFGALFALYIIWGSTYLVIRIGVE-SWPPLMMAGVRFLIAGILLL-AFLLL---RGHP----------------   61 (292)
T ss_pred             hHHHHHHHHHHHHHHHHHhhHHHHHHHHhc-cCCHHHHHHHHHHHHHHHHH-HHHHH---hCCC----------------
Confidence            344444444455555444578888996555 22334444433333444333 22221   2111                


Q ss_pred             CCCCccccCChhHHHHHHHHHHHH-HHHHHHHHhcc-CCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHH
Q 017456           94 NDDNKLILMRPPVFFASAIIGILT-GLDNYLYAYGV-ARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLT  171 (371)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~~~G~l~-~~~n~Ly~~gl-~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~  171 (371)
                        .     .++|++..+..+|++. +..+.++.++. +++|++.++++.+++|+|+++++++ +|||++++++.|+++++
T Consensus        62 --~-----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~  133 (292)
T PRK11272         62 --L-----PTLRQWLNAALIGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGL  133 (292)
T ss_pred             --C-----CcHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHH
Confidence              0     1234455556677654 44566666788 9999999999999999999999986 69999999999999999


Q ss_pred             HHHHHHhcccCCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHH
Q 017456          172 LGAVVLGLHTNGDRPDNESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMV  251 (371)
Q Consensus       172 ~Ga~ll~~~~~s~~~~~~s~~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~vg~~  251 (371)
                      +|+.++..+++.        +....|+++.++|+++||+|....    ||..++++    .....|...++.+.+..-..
T Consensus       134 ~Gv~ll~~~~~~--------~~~~~G~l~~l~a~~~~a~~~~~~----~~~~~~~~----~~~~~~~~~~~~~~~~~~~~  197 (292)
T PRK11272        134 AGIVLLNSGGNL--------SGNPWGAILILIASASWAFGSVWS----SRLPLPVG----MMAGAAEMLAAGVVLLIASL  197 (292)
T ss_pred             HhHHHHhcCccc--------ccchHHHHHHHHHHHHHHHHHHHH----HhcCCCcc----hHHHHHHHHHHHHHHHHHHH
Confidence            998877543211        113579999999999999988775    44433222    12223333444443332222


Q ss_pred             HccchhhhhhhhhhhccccchhHHHHHHHHHHHHHHHHhhhhhhhhchhhHHHHHHHHHHHHHH-HHHHHHhCCCCchhH
Q 017456          252 VNKDFQAIGKEARAYTLGEGKYYAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTE-ILAVIFYKEKFQAEK  330 (371)
Q Consensus       252 ~~g~~~~l~~e~~~f~~g~~~y~~~lv~~av~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPvt~-ilavl~fge~~t~~k  330 (371)
                      ..++......+.+.+.   ...++.++.+++.+.+...++.-+    ++-..++....+ |+.+ +++++++||+++..+
T Consensus       198 ~~~~~~~~~~~~~~~~---~i~~l~i~~s~~~~~l~~~~~~~~----~~~~~s~~~~l~-Pi~a~i~~~~~l~E~~t~~~  269 (292)
T PRK11272        198 LSGERLTALPTLSGFL---ALGYLAVFGSIIAISAYMYLLRNV----RPALATSYAYVN-PVVAVLLGTGLGGETLSPIE  269 (292)
T ss_pred             HcCCcccccCCHHHHH---HHHHHHHHHHHHHHHHHHHHHhhc----CHHHHHHHHHHH-HHHHHHHHHHHcCCCCcHHH
Confidence            3322111111111110   112233455666665555543322    222334444444 8755 999999999999999


Q ss_pred             HHHHHHHHHHHHHHHh
Q 017456          331 GVSLALSLWGFASYFY  346 (371)
Q Consensus       331 ~ig~~Lvl~G~~~y~y  346 (371)
                      ++|+++++.|......
T Consensus       270 iiG~~lIi~gv~~~~~  285 (292)
T PRK11272        270 WLALGVIVFAVVLVTL  285 (292)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999999988877543

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.74  E-value=1.5e-16  Score=155.59  Aligned_cols=236  Identities=15%  Similarity=0.149  Sum_probs=172.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccCCC
Q 017456          105 PVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGD  184 (371)
Q Consensus       105 ~~~~~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~s~  184 (371)
                      +..-.+..+..++.+-|+.|+.+++|++|++.+++.++.-.||..++.++..||+|+.|++++++.+.|++++..+++..
T Consensus       157 ~~ak~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~  236 (416)
T KOG2765|consen  157 QTAKLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQ  236 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccc
Confidence            56678888899999999999999999999999999999999999999999999999999999999999998888776532


Q ss_pred             CCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHH---HHHHc---cchh-
Q 017456          185 RPDNESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTV---GMVVN---KDFQ-  257 (371)
Q Consensus       185 ~~~~~s~~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~v---g~~~~---g~~~-  257 (371)
                      . ++....+..+|+++++.+|++||+|..+.    ||-..++.  .-++||.+.+.++..-+++   .+++-   ++.+ 
T Consensus       237 ~-~~~~a~~~llG~llaL~sA~~YavY~vll----k~~~~~eg--~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F  309 (416)
T KOG2765|consen  237 N-SDLPASRPLLGNLLALLSALLYAVYTVLL----KRKIGDEG--ERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERF  309 (416)
T ss_pred             c-ccCCccchhHHHHHHHHHHHHHHHHHHHH----Hhhccccc--ccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcc
Confidence            2 22344567899999999999999999984    33222221  1246777777776543332   22222   2100 


Q ss_pred             hhhhhhhhhccccchhHHHHHHHHHHHHHHHHhhhhhhhhchhhHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHH
Q 017456          258 AIGKEARAYTLGEGKYYAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTEILAVIFYKEKFQAEKGVSLALS  337 (371)
Q Consensus       258 ~l~~e~~~f~~g~~~y~~~lv~~av~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPvt~ilavl~fge~~t~~k~ig~~Lv  337 (371)
                      .+|..   . +.......-++.++++=.+...+    +..++++...+-+++-+|+..+.-+++=|.++++..++|.+.+
T Consensus       310 ~lP~~---~-q~~~vv~~~ligtvvSDylW~~a----~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~I  381 (416)
T KOG2765|consen  310 ELPSS---T-QFSLVVFNNLIGTVVSDYLWAKA----VLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPI  381 (416)
T ss_pred             cCCCC---c-eeEeeeHhhHHHHHHHHHHHHHH----HHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHH
Confidence            22221   1 11111112266666665555555    2345566666666777899999999999999999999999999


Q ss_pred             HHHHHHHHhccccchhhh
Q 017456          338 LWGFASYFYGEIKNKKKM  355 (371)
Q Consensus       338 l~G~~~y~y~~~~~~~k~  355 (371)
                      +.||+...|....++|++
T Consensus       382 fv~Fv~vn~~~~~~~~~~  399 (416)
T KOG2765|consen  382 FVGFVIVNISSENSKKDP  399 (416)
T ss_pred             HHHHhheecccccccccc
Confidence            999999988776666554

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.73  E-value=1.2e-15  Score=148.10  Aligned_cols=213  Identities=15%  Similarity=0.164  Sum_probs=142.1

Q ss_pred             HHHHHHHhccCC-CChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccCCCCCCCcchhhhHHH
Q 017456          119 LDNYLYAYGVAR-LPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDRPDNESARQYLVG  197 (371)
Q Consensus       119 ~~n~Ly~~gl~y-lpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~s~~~~~~s~~~~~~G  197 (371)
                      .+..++..+++| +|++.++++.+++|+++++++++++|||++++++.++++.++|+.++..++.++   +   .....|
T Consensus        71 ~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~---~---~~~~~G  144 (299)
T PRK11453         71 GQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNG---Q---HVAMLG  144 (299)
T ss_pred             HHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCC---c---chhHHH
Confidence            444455568887 799999999999999999999999999999999999999999988776432111   1   113579


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHH-HHHHHccchhhhhhhhhhhccc--cchhH
Q 017456          198 FLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCT-VGMVVNKDFQAIGKEARAYTLG--EGKYY  274 (371)
Q Consensus       198 ~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~-vg~~~~g~~~~l~~e~~~f~~g--~~~y~  274 (371)
                      +++++.|+++|++|..+.++..    ++++....+.++++.++++.+++. .+...+++. ....+...+...  ....+
T Consensus       145 ~~l~l~aal~~a~~~v~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~  219 (299)
T PRK11453        145 FMLTLAAAFSWACGNIFNKKIM----SHSTRPAVMSLVVWSALIPIIPFFVASLILDGSA-TMIHSLVTIDMTTILSLMY  219 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHh----cccCccchhHHHHHHHHHHHHHHHHHHHHhcCch-hhhhhhccCCHHHHHHHHH
Confidence            9999999999999999875543    333333345666777777665554 333344321 110000001000  01122


Q ss_pred             HHHHHHHHHHHHHHHhhhhhhhhchhhHHHHHHHHHHHHHH-HHHHHHhCCCCchhHHHHHHHHHHHHHHHHhc
Q 017456          275 AVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTE-ILAVIFYKEKFQAEKGVSLALSLWGFASYFYG  347 (371)
Q Consensus       275 ~~lv~~av~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPvt~-ilavl~fge~~t~~k~ig~~Lvl~G~~~y~y~  347 (371)
                      +.++.+++.+.+...++..+-..    ..+.++..+ |+.+ +++++++||+++..+++|+++++.|...-.++
T Consensus       220 l~i~~t~~~~~l~~~~l~~~~a~----~~s~~~~l~-Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~  288 (299)
T PRK11453        220 LAFVATIVGYGIWGTLLGRYETW----RVAPLSLLV-PVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFG  288 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCHH----HHHHHHHHH-HHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcc
Confidence            33556666666655554333221    233443344 8866 99999999999999999999999888765543

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.70  E-value=5.4e-15  Score=143.35  Aligned_cols=222  Identities=18%  Similarity=0.216  Sum_probs=138.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccCCC
Q 017456          105 PVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGD  184 (371)
Q Consensus       105 ~~~~~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~s~  184 (371)
                      +.+...+..++..+.++.+|.+|++++|++.++++.++.|+++++++++++|||++++++.++++.++|++++..+ +++
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~-~~~  149 (296)
T PRK15430         71 QKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWT-FGS  149 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHH-cCC
Confidence            4444444555667888999999999999999999999999999999999999999999999999999999887632 111


Q ss_pred             CCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHccchhhhhhhhh
Q 017456          185 RPDNESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKEAR  264 (371)
Q Consensus       185 ~~~~~s~~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~vg~~~~g~~~~l~~e~~  264 (371)
                               .   ....++|+++||+|..+.    ||..+++.. .......|...++.+... .. ...+.......  
T Consensus       150 ---------~---~~~~l~aa~~~a~~~i~~----r~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~--  208 (296)
T PRK15430        150 ---------L---PIIALGLAFSFAFYGLVR----KKIAVEAQT-GMLIETMWLLPVAAIYLF-AI-ADSSTSHMGQN--  208 (296)
T ss_pred             ---------c---cHHHHHHHHHHHHHHHHH----HhcCCCCch-hHHHHHHHHHHHHHHHHH-HH-ccCCcccccCC--
Confidence                     0   135777899999988774    333222222 222233343333332211 11 11111001000  


Q ss_pred             hhccccchhHHHHHHHHHHHHHHHHhhhhhhhhchhhHHHHHHHHHHHHHH-HHHHHHhCCCCchhHHHHHHHHHHHHHH
Q 017456          265 AYTLGEGKYYAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTE-ILAVIFYKEKFQAEKGVSLALSLWGFAS  343 (371)
Q Consensus       265 ~f~~g~~~y~~~lv~~av~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPvt~-ilavl~fge~~t~~k~ig~~Lvl~G~~~  343 (371)
                      .+. ....++...+.+.+.+.+...+....    ++-..+.....+ |+.+ +++++++||+++..+++|+++++.|+..
T Consensus       209 ~~~-~~~~~~~~g~~t~i~~~~~~~a~~~~----~a~~~s~~~~l~-Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v  282 (296)
T PRK15430        209 PMS-LNLLLIAAGIVTTVPLLCFTAAATRL----RLSTLGFFQYIG-PTLMFLLAVTFYGEKPGADKMVTFAFIWVALAI  282 (296)
T ss_pred             cHH-HHHHHHHHHHHHHHHHHHHHHHHhcC----CHHHHHHHHHHH-HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence            000 00011111223434444433332222    222233333344 7755 9999999999999999999999999999


Q ss_pred             HHhccccchhh
Q 017456          344 YFYGEIKNKKK  354 (371)
Q Consensus       344 y~y~~~~~~~k  354 (371)
                      +..+.-...||
T Consensus       283 ~~~~~~~~~~~  293 (296)
T PRK15430        283 FVMDAIYTQRR  293 (296)
T ss_pred             HHHHHHHHhhh
Confidence            97776555443

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=99.69  E-value=3.9e-17  Score=154.12  Aligned_cols=218  Identities=14%  Similarity=0.236  Sum_probs=171.3

Q ss_pred             HHHHHhccCC-CChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccCCCCC-------CC---c
Q 017456          121 NYLYAYGVAR-LPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDRP-------DN---E  189 (371)
Q Consensus       121 n~Ly~~gl~y-lpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~s~~~-------~~---~  189 (371)
                      |..-.+++++ +|.-.+.++++-.++-||+.+++++|+|++.+|+.++++.++|+++-.+.++.|..       .+   .
T Consensus        78 nv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~  157 (330)
T KOG1583|consen   78 NVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQS  157 (330)
T ss_pred             eeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccc
Confidence            3333445555 66666999999999999999999999999999999999999998876554443211       11   1


Q ss_pred             chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHH--HHHHccchhhh-hhh---h
Q 017456          190 SARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTV--GMVVNKDFQAI-GKE---A  263 (371)
Q Consensus       190 s~~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~v--g~~~~g~~~~l-~~e---~  263 (371)
                      +.....+|+.+...|.+..|...++.|..|||++|+.     -|..+|.++...+.++.  ..+.+ +|... ..|   .
T Consensus       158 ~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~-----~EalFytH~LsLP~Flf~~~div~-~~~~~~~se~~~~  231 (330)
T KOG1583|consen  158 DFFWWLIGIALLVFALLLSAYMGIYQETTYQKYGKHW-----KEALFYTHFLSLPLFLFMGDDIVS-HWRLAFKSESYLI  231 (330)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCh-----HHHHHHHHHhccchHHHhcchHHH-HHHHHhcCcceec
Confidence            2233468999999999999999999999999998875     49999999999877773  22222 23211 111   0


Q ss_pred             hhhccccchhHHHHHHHHHHHHHHHHhhhhhhhhchhhHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHH
Q 017456          264 RAYTLGEGKYYAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFAS  343 (371)
Q Consensus       264 ~~f~~g~~~y~~~lv~~av~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPvt~ilavl~fge~~t~~k~ig~~Lvl~G~~~  343 (371)
                      ....---++.|..+..+.+++-+|.-|+.-+...++|++-+++.+++.-++.+++++.|.++|++..++|.++++.|...
T Consensus       232 p~~g~~vP~~~~yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~  311 (330)
T KOG1583|consen  232 PLLGFKVPSMWVYLLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLL  311 (330)
T ss_pred             cccCccccHHHHHHHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHH
Confidence            01100023555668899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             H
Q 017456          344 Y  344 (371)
Q Consensus       344 y  344 (371)
                      |
T Consensus       312 f  312 (330)
T KOG1583|consen  312 F  312 (330)
T ss_pred             H
Confidence            8

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.65  E-value=2.8e-13  Score=131.20  Aligned_cols=214  Identities=14%  Similarity=0.109  Sum_probs=136.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccCCC
Q 017456          105 PVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGD  184 (371)
Q Consensus       105 ~~~~~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~s~  184 (371)
                      |+.......|+..+..+.++.++++|+|++.++++..++|+++++++.    ||..+.  .++.++.+|+.++...+. +
T Consensus        69 ~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~~~--~~~~i~~~Gv~li~~~~~-~  141 (293)
T PRK10532         69 EQRLPLLFYGVSLGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPVDF--VWVVLAVLGLWFLLPLGQ-D  141 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChHHH--HHHHHHHHHHheeeecCC-C
Confidence            444445567777788888888999999999999999999999999873    565544  456667888877652221 1


Q ss_pred             CCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHccchhhhhhhhh
Q 017456          185 RPDNESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKEAR  264 (371)
Q Consensus       185 ~~~~~s~~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~vg~~~~g~~~~l~~e~~  264 (371)
                      .     +.....|+++.++|+++||.|..+.++..    ++++...   + .+..+++++++.......++  ....+..
T Consensus       142 ~-----~~~~~~G~ll~l~aa~~~a~~~v~~r~~~----~~~~~~~---~-~~~~~~~~~~l~~~~~~~~~--~~~~~~~  206 (293)
T PRK10532        142 V-----SHVDLTGAALALGAGACWAIYILSGQRAG----AEHGPAT---V-AIGSLIAALIFVPIGALQAG--EALWHWS  206 (293)
T ss_pred             c-----ccCChHHHHHHHHHHHHHHHHHHHHHHHh----ccCCchH---H-HHHHHHHHHHHHHHHHHccC--cccCCHH
Confidence            1     11235799999999999999888875543    3333211   1 23345555444433333321  1111111


Q ss_pred             hhccccchhHHHHHHHHHHHHHHHHhhhhhhhhchhhHHHHHHHHHHHHHH-HHHHHHhCCCCchhHHHHHHHHHHHHHH
Q 017456          265 AYTLGEGKYYAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTE-ILAVIFYKEKFQAEKGVSLALSLWGFAS  343 (371)
Q Consensus       265 ~f~~g~~~y~~~lv~~av~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPvt~-ilavl~fge~~t~~k~ig~~Lvl~G~~~  343 (371)
                      .+  + ...++.++++++.|.+...++.-.    ++-..+.+...+ |+.+ +++++++||+++..+++|+++++.|...
T Consensus       207 ~~--~-~~l~lgv~~t~~~~~l~~~~~~~~----~a~~as~~~~l~-Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~  278 (293)
T PRK10532        207 IL--P-LGLAVAILSTALPYSLEMIALTRL----PTRTFGTLMSME-PALAAVSGMIFLGETLTLIQWLALGAIIAASMG  278 (293)
T ss_pred             HH--H-HHHHHHHHHHHHHHHHHHHHHHhc----ChhHHHHHHHhH-HHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHH
Confidence            11  0 112444666777766655553333    222334443444 8755 9999999999999999999999999988


Q ss_pred             HHhcc
Q 017456          344 YFYGE  348 (371)
Q Consensus       344 y~y~~  348 (371)
                      +...+
T Consensus       279 ~~~~~  283 (293)
T PRK10532        279 STLTI  283 (293)
T ss_pred             HHhcC
Confidence            86543

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.62  E-value=1.6e-13  Score=131.92  Aligned_cols=218  Identities=11%  Similarity=0.051  Sum_probs=133.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccCCCC
Q 017456          106 VFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDR  185 (371)
Q Consensus       106 ~~~~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~s~~  185 (371)
                      .....+..|+..+....++.+++++.|++..+.+.+++|+++++++++++|||++++++.|+++.+.|+.++..++.. +
T Consensus        62 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~-~  140 (281)
T TIGR03340        62 FWLLLAISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFA-Q  140 (281)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhccccc-c
Confidence            333555566666788888888999999999999999999999999999999999999999999999999887643221 1


Q ss_pred             CCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHccchhhhhhhhhh
Q 017456          186 PDNESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKEARA  265 (371)
Q Consensus       186 ~~~~s~~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~vg~~~~g~~~~l~~e~~~  265 (371)
                             ....|+.+.+.++++|++|..+.++..++..   +.........+..+....++..-....++....+.+...
T Consensus       141 -------~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (281)
T TIGR03340       141 -------HRRKAYAWALAAALGTAIYSLSDKAAALGVP---AFYSALGYLGIGFLAMGWPFLLLYLKRHGRSMFPYARQI  210 (281)
T ss_pred             -------cchhHHHHHHHHHHHHHHhhhhccccccchh---cccccHHHHHHHHHHHHHHHHHHHHHHhccchhhhHHHH
Confidence                   1235788899999999998887533221111   111111122222222212222211112221110110000


Q ss_pred             hccccchhHHHHHHHHHHHHHHHHhhhhhhhhchhhHHHHHHHHHHHHHH-HHHHHHhCCCCchhHHHHHHHHHHHHHH
Q 017456          266 YTLGEGKYYAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTE-ILAVIFYKEKFQAEKGVSLALSLWGFAS  343 (371)
Q Consensus       266 f~~g~~~y~~~lv~~av~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPvt~-ilavl~fge~~t~~k~ig~~Lvl~G~~~  343 (371)
                      +    ...+...+.+++.+.+...++...-...    .+.. ....|+.+ +++++++||+++..+++|+++++.|...
T Consensus       211 ~----~~~~~~~~~s~l~~~l~~~al~~~~a~~----~~~~-~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       211 L----PSATLGGLMIGGAYALVLWAMTRLPVAT----VVAL-RNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             H----HHHHHHHHHHHHHHHHHHHHHhhCCceE----EEee-cccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            0    0112224445555555444432221111    1111 13347755 9999999999999999999999998764

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.61  E-value=1.5e-13  Score=133.24  Aligned_cols=208  Identities=12%  Similarity=0.053  Sum_probs=127.0

Q ss_pred             HHHHHHHHHhcc----CCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccCCCCCCC--cc
Q 017456          117 TGLDNYLYAYGV----ARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDRPDN--ES  190 (371)
Q Consensus       117 ~~~~n~Ly~~gl----~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~s~~~~~--~s  190 (371)
                      .+..+.++..++    +.+|++.++++.+++|+|+++++++++|||++++++.++++.++|++++..++.+.+..+  .+
T Consensus        71 ~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~  150 (295)
T PRK11689         71 FVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINN  150 (295)
T ss_pred             HHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhc
Confidence            345555444454    457888899999999999999999999999999999999999999988764432111000  01


Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHccchhhhhhhhhhhcccc
Q 017456          191 ARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKEARAYTLGE  270 (371)
Q Consensus       191 ~~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~vg~~~~g~~~~l~~e~~~f~~g~  270 (371)
                      ..+...|+++.++|+++||+|..+.++.    .++.+.   +.+..   ..+.+.+......+++.. .+.+.+.+    
T Consensus       151 ~~~~~~G~~~~l~aa~~~A~~~v~~k~~----~~~~~~---~~~~~---~~~~~~l~~~~~~~~~~~-~~~~~~~~----  215 (295)
T PRK11689        151 IASNPLSYGLAFIGAFIWAAYCNVTRKY----ARGKNG---ITLFF---ILTALALWIKYFLSPQPA-MVFSLPAI----  215 (295)
T ss_pred             cccChHHHHHHHHHHHHHHHHHHHHhhc----cCCCCc---hhHHH---HHHHHHHHHHHHHhcCcc-ccCCHHHH----
Confidence            1124579999999999999999886443    333222   11211   112222222222333221 11111111    


Q ss_pred             chhHH-HHHHHHHHHHHHHHhhhhhhhhchhhHHHHHHHHHHHHHH-HHHHHHhCCCCchhHHHHHHHHHHHHHHHH
Q 017456          271 GKYYA-VVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTE-ILAVIFYKEKFQAEKGVSLALSLWGFASYF  345 (371)
Q Consensus       271 ~~y~~-~lv~~av~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPvt~-ilavl~fge~~t~~k~ig~~Lvl~G~~~y~  345 (371)
                       .+.. ..+.+.+.+.+...++..+    +....+... ...|+.+ +++++++||+++..+++|+++++.|+....
T Consensus       216 -~~l~~~~~~t~~~~~l~~~al~~~----~a~~~s~~~-~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~  286 (295)
T PRK11689        216 -IKLLLAAAAMGFGYAAWNVGILHG----NMTLLATAS-YFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCW  286 (295)
T ss_pred             -HHHHHHHHHHHHHHHHHHHHHHcc----CHHHHHHHH-HhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHh
Confidence             1111 1123334444433333222    222233333 3448865 999999999999999999999999887664

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.49  E-value=1.1e-10  Score=110.02  Aligned_cols=214  Identities=21%  Similarity=0.280  Sum_probs=133.0

Q ss_pred             HHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHH-HHhccccchhHHHHHHHHHHHHHHHhcccCCCCCC
Q 017456          109 ASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAF-LLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDRPD  187 (371)
Q Consensus       109 ~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~-l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~s~~~~  187 (371)
                      ..+.-++..+..+.+|..+++|+|++.++++.++.|++++++++ +++|||++++++.++++.++|+.++...+..+.  
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~--  149 (292)
T COG0697          72 LLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGG--  149 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcch--
Confidence            34444455578888998899999999999999999999999996 777999999999999999999888875543211  


Q ss_pred             CcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHH-HHHHHHHHHHHHHHHHccchhhhhhhhhhh
Q 017456          188 NESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQM-VMCLFATLVCTVGMVVNKDFQAIGKEARAY  266 (371)
Q Consensus       188 ~~s~~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~-~~slvat~~~~vg~~~~g~~~~l~~e~~~f  266 (371)
                         .. +..|+++.+.+++.++++....++..     +.+.   ..+.. +... ....+....... +.+ .+.+...+
T Consensus       150 ---~~-~~~g~~~~l~a~~~~a~~~~~~~~~~-----~~~~---~~~~~~~~~~-~~~~~~~~~~~~-~~~-~~~~~~~~  214 (292)
T COG0697         150 ---IL-SLLGLLLALAAALLWALYTALVKRLS-----RLGP---VTLALLLQLL-LALLLLLLFFLS-GFG-APILSRAW  214 (292)
T ss_pred             ---hH-HHHHHHHHHHHHHHHHHHHHHHHHhc-----CCCh---HHHHHHHHHH-HHHHHHHHHHhc-ccc-ccCCHHHH
Confidence               11 67999999999999999887754443     1111   11111 1111 111111111111 111 11111111


Q ss_pred             ccccchhHHHHHHHHHHHHHHHHhhhhhhhhchhhHHHHHHHHHHHHHH-HHHHHHhCCCCchhHHHHHHHHHHHHHHHH
Q 017456          267 TLGEGKYYAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTE-ILAVIFYKEKFQAEKGVSLALSLWGFASYF  345 (371)
Q Consensus       267 ~~g~~~y~~~lv~~av~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPvt~-ilavl~fge~~t~~k~ig~~Lvl~G~~~y~  345 (371)
                         ...-+..++.+.+.+.+...++.-.   ..+ ..+.+. ...|+.+ +++++++||+++..+++|+++++.|.....
T Consensus       215 ---~~~~~~g~~~~~i~~~~~~~~~~~~---~~~-~~~~~~-~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~  286 (292)
T COG0697         215 ---LLLLYLGVFSTGLAYLLWYYALRLL---GAS-LVALLS-LLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLAS  286 (292)
T ss_pred             ---HHHHHHHHHHHHHHHHHHHHHHHhc---Cch-HHHHHH-HHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHh
Confidence               0001111222223333333332221   111 112222 3347766 669999999999999999999999999887


Q ss_pred             hc
Q 017456          346 YG  347 (371)
Q Consensus       346 y~  347 (371)
                      +.
T Consensus       287 ~~  288 (292)
T COG0697         287 LR  288 (292)
T ss_pred             cc
Confidence            66

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.42  E-value=1.7e-11  Score=117.60  Aligned_cols=220  Identities=17%  Similarity=0.195  Sum_probs=157.5

Q ss_pred             HHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccCCCCCCCc
Q 017456          110 SAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDRPDNE  189 (371)
Q Consensus       110 ~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~s~~~~~~  189 (371)
                      .+..|+..+.|-.+-+||+.|+|++.||...++.++|..+|+.++--||+++.-...+.+...|..++...+.+      
T Consensus        87 ~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTq------  160 (349)
T KOG1443|consen   87 LAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQ------  160 (349)
T ss_pred             hhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccc------
Confidence            45678888999999999999999999999999999999999999999999999888888877777776655442      


Q ss_pred             chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hcccchhHHHHHHHHHHHHHHHHHHHHHHHccchhhhhhhhh-hh
Q 017456          190 SARQYLVGFLMTIGAAVLYGFVLPLMELTYKRA--RQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKEAR-AY  266 (371)
Q Consensus       190 s~~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~--~k~~~~~~vle~q~~~slvat~~~~vg~~~~g~~~~l~~e~~-~f  266 (371)
                         -.+.|+.++++|++..|+.+.+.|...||-  .++++..++-.+|-|+++   ..+..+..++|.......+.. .+
T Consensus       161 ---f~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~---~Ll~~~l~fEG~~~~~~s~~f~~~  234 (349)
T KOG1443|consen  161 ---FNIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSI---GLLPLSLLFEGLHLITSSSIFRFQ  234 (349)
T ss_pred             ---eeehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHH---HHHHHHHHHcccccchhhhHHHhc
Confidence               147999999999999999999999999874  356666666677766543   344467778886443322221 22


Q ss_pred             ccccchhHHHHHHHHHHHHHHH--H--hhhhhhhhchhhHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHH
Q 017456          267 TLGEGKYYAVVVASALIWQCFF--L--GAIGVIYCGSSLLSAIIIAVLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFA  342 (371)
Q Consensus       267 ~~g~~~y~~~lv~~av~~q~~~--~--g~~Glv~~~ssl~~~vv~t~~lPvt~ilavl~fge~~t~~k~ig~~Lvl~G~~  342 (371)
                      +.+.  .+. .++....-+...  +  .-.-++..+++++.++.-..---.+.++|++..+|.++...+.|+.+++.|..
T Consensus       235 d~~~--~~r-v~g~i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~  311 (349)
T KOG1443|consen  235 DTGL--ILR-VIGLISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGIL  311 (349)
T ss_pred             CccH--HHH-HHHHHHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHH
Confidence            2222  111 111111111111  1  11223334556555555433334466899999999999999999999999999


Q ss_pred             HH
Q 017456          343 SY  344 (371)
Q Consensus       343 ~y  344 (371)
                      .|
T Consensus       312 ~~  313 (349)
T KOG1443|consen  312 LH  313 (349)
T ss_pred             Hh
Confidence            98

>TIGR00688 rarD rarD protein

Probab=99.40  E-value=9e-11  Score=111.12  Aligned_cols=99  Identities=16%  Similarity=0.221  Sum_probs=83.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccCCCC
Q 017456          106 VFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDR  185 (371)
Q Consensus       106 ~~~~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~s~~  185 (371)
                      +.......|++.+.++.+|.++++|+|+++++++.++.|+|+++++++++|||++++++.++++.++|++++..+ +++ 
T Consensus        69 ~~~~~~~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~-~~~-  146 (256)
T TIGR00688        69 LILSLLLCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVL-KGS-  146 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-cCC-
Confidence            344566778888999999999999999999999999999999999999999999999999999999999877532 111 


Q ss_pred             CCCcchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 017456          186 PDNESARQYLVGFLMTIGAAVLYGFVLPLMEL  217 (371)
Q Consensus       186 ~~~~s~~~~~~G~~l~l~Aa~~~alyl~l~e~  217 (371)
                          .   .    .+.++++++|++|....++
T Consensus       147 ----~---~----~~~l~aa~~~a~~~i~~~~  167 (256)
T TIGR00688       147 ----L---P----WEALVLAFSFTAYGLIRKA  167 (256)
T ss_pred             ----c---h----HHHHHHHHHHHHHHHHHhh
Confidence                0   1    3578899999999888543

This uncharacterized protein is predicted to have many membrane-spanning domains.

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.39  E-value=1.3e-10  Score=111.15  Aligned_cols=218  Identities=18%  Similarity=0.227  Sum_probs=149.5

Q ss_pred             ChhHHHHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccC
Q 017456          103 RPPVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTN  182 (371)
Q Consensus       103 ~~~~~~~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~  182 (371)
                      +||.++...+.+++++.|-++|.|+.+.=-+-.+|+=+...|.++.+.+.+++|||+++.|+++++++.+|+....++.+
T Consensus        68 ~p~~~~~~~l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g  147 (293)
T COG2962          68 QPKTLLMLALTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLG  147 (293)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcC
Confidence            45889999999999999999999999987777789999999999999999999999999999999999999988877654


Q ss_pred             CCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-hhHHHHHHHHHHHHHHHHHHHHHHHccchhh-hh
Q 017456          183 GDRPDNESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEIT-YALVLEIQMVMCLFATLVCTVGMVVNKDFQA-IG  260 (371)
Q Consensus       183 s~~~~~~s~~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~-~~~vle~q~~~slvat~~~~vg~~~~g~~~~-l~  260 (371)
                      +-         .    +.+++=+..|++|..+     ||..+-+. ....+|+..     -.+++++.++...|-++ ..
T Consensus       148 ~l---------p----wval~la~sf~~Ygl~-----RK~~~v~a~~g~~lE~l~-----l~p~al~yl~~l~~~~~~~~  204 (293)
T COG2962         148 SL---------P----WVALALALSFGLYGLL-----RKKLKVDALTGLTLETLL-----LLPVALIYLLFLADSGQFLQ  204 (293)
T ss_pred             CC---------c----HHHHHHHHHHHHHHHH-----HHhcCCchHHhHHHHHHH-----HhHHHHHHHHHHhcCchhhh
Confidence            31         1    2445567789998888     55545432 344556553     23444444443333221 11


Q ss_pred             hhhhhhccccchhHHHHH----HHHHHHHHHHHhhhhhhhhchhhHHHHHHHHHHHHHH-HHHHHHhCCCCchhHHHHHH
Q 017456          261 KEARAYTLGEGKYYAVVV----ASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTE-ILAVIFYKEKFQAEKGVSLA  335 (371)
Q Consensus       261 ~e~~~f~~g~~~y~~~lv----~~av~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPvt~-ilavl~fge~~t~~k~ig~~  335 (371)
                             .+....+..++    .|++.-.++..+...+...+-    |+..=.+ |... ++|+++|||+++..|.++-+
T Consensus       205 -------~~~~~~~~LLv~aG~vTavpL~lf~~aa~~lpls~~----G~lqYi~-Ptl~fllav~i~~E~~~~~~~~~F~  272 (293)
T COG2962         205 -------QNANSLWLLLVLAGLVTAVPLLLFAAAAKRLPLSTL----GFLQYIE-PTLMFLLAVLIFGEPFDSDQLVTFA  272 (293)
T ss_pred             -------cCCchHHHHHHHhhHHHHHHHHHHHHHHhcCCHHHH----HHHHHHH-HHHHHHHHHHHcCCCCCHHHHHHHH
Confidence                   01112222222    233333333333322211111    2222233 7644 99999999999999999999


Q ss_pred             HHHHHHHHHHhccccchhhh
Q 017456          336 LSLWGFASYFYGEIKNKKKM  355 (371)
Q Consensus       336 Lvl~G~~~y~y~~~~~~~k~  355 (371)
                      .+-.|.+.|......+.+|+
T Consensus       273 ~IW~aL~l~~~d~l~~~r~~  292 (293)
T COG2962         273 FIWLALALFSIDGLYTARKK  292 (293)
T ss_pred             HHHHHHHHHHHHHHHHHhhc
Confidence            99999999998887666554

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.38  E-value=2.8e-10  Score=110.50  Aligned_cols=221  Identities=14%  Similarity=0.098  Sum_probs=145.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHH-HhHHHHHHHHHHHhccccchhH----HHHHHHHHHHHHHHh
Q 017456          104 PPVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIA-SQLAFTAAFAFLLVKQKLTSYS----LNAVFLLTLGAVVLG  178 (371)
Q Consensus       104 ~~~~~~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~s-sql~Ftalfs~l~~kek~t~~~----i~~vvLl~~Ga~ll~  178 (371)
                      ++.+...+..|++++..|+.|..+.+|+.++++..+.+ .+++++++++.+++|||.++++    +.|+++..+|+.++.
T Consensus        56 ~~~~~~g~l~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~  135 (290)
T TIGR00776        56 LSIFLVGLLSGAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTS  135 (290)
T ss_pred             cHHHHHHHHHHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEE
Confidence            47777899999999999999999999999999999988 9999999999999999999999    999999999988876


Q ss_pred             cccCCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHccchhh
Q 017456          179 LHTNGDRPDNESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQA  258 (371)
Q Consensus       179 ~~~~s~~~~~~s~~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~vg~~~~g~~~~  258 (371)
                      ..++++.. +.+..++..|+++.+.|+++|+.|....+..     +.+++. ..=.|.+.-+++..+..... .  +.+.
T Consensus       136 ~~~~~~~~-~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~-----~~~~~~-~~~~~~~g~~~~~~~~~~~~-~--~~~~  205 (290)
T TIGR00776       136 RSKDKSAG-IKSEFNFKKGILLLLMSTIGYLVYVVVAKAF-----GVDGLS-VLLPQAIGMVIGGIIFNLGH-I--LAKP  205 (290)
T ss_pred             eccccccc-cccccchhhHHHHHHHHHHHHHHHHHHHHHc-----CCCcce-ehhHHHHHHHHHHHHHHHHH-h--cccc
Confidence            55432111 0000223569999999999999999997643     122221 11113332222222222211 1  1011


Q ss_pred             hhhhhhhhccccchhHHHHHHHHHHHHHHHHhhhhhhhhchhhHHHHHHHHHHHHHH-HHHHHHhCCCCchhHH----HH
Q 017456          259 IGKEARAYTLGEGKYYAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTE-ILAVIFYKEKFQAEKG----VS  333 (371)
Q Consensus       259 l~~e~~~f~~g~~~y~~~lv~~av~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPvt~-ilavl~fge~~t~~k~----ig  333 (371)
                      .+.+. .+    .....-++| .+.+.....+...   ......+.+++..+ |+++ +.+++++||+.+..+.    +|
T Consensus       206 ~~~~~-~~----~~~~~Gi~~-~ia~~~y~~~~~~---~~~~~~~~~ls~~~-pvia~~~~v~~l~E~~~~~~~~~~~iG  275 (290)
T TIGR00776       206 LKKYA-IL----LNILPGLMW-GIGNFFYLFSAQP---KVGVATSFSLSQLG-VIISTLGGILILGEKKTKREMIAISVG  275 (290)
T ss_pred             hHHHH-HH----HHHHHHHHH-HHHHHHHHHHccc---ccchhhHHHHHHHH-HHHHHHHHHHHhccCCCcceeehhHHH
Confidence            11110 00    000011122 2333333333221   22333566777777 7755 9999999999999999    99


Q ss_pred             HHHHHHHHHHH
Q 017456          334 LALSLWGFASY  344 (371)
Q Consensus       334 ~~Lvl~G~~~y  344 (371)
                      +++++.|...-
T Consensus       276 ~~lIi~~~~l~  286 (290)
T TIGR00776       276 IILIIIAANIL  286 (290)
T ss_pred             HHHHHHHHHHH
Confidence            99999887764

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.34  E-value=4.1e-11  Score=104.20  Aligned_cols=150  Identities=16%  Similarity=0.204  Sum_probs=120.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHccchhhhhhhhhhhc--cc-cchh
Q 017456          197 GFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKEARAYT--LG-EGKY  273 (371)
Q Consensus       197 G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~vg~~~~g~~~~l~~e~~~f~--~g-~~~y  273 (371)
                      |++++++|+++.|++.++.|+.+++..++......++++.|.+..+.+.+++..+..++++..+...+...  .+ ....
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            78999999999999999999998875333334456899999999999999987777665442322221111  11 2245


Q ss_pred             HHHHHHHHHHHHHHHHhhhhhhhhchhhHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHh
Q 017456          274 YAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASYFY  346 (371)
Q Consensus       274 ~~~lv~~av~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPvt~ilavl~fge~~t~~k~ig~~Lvl~G~~~y~y  346 (371)
                      +..++.+.+.+.+.-.....++..+|+++.+++.....+++.++++++|||++|..+++|.++++.|...|.|
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            5667778888888888888999999999999999888889999999999999999999999999999999976

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.24  E-value=6e-10  Score=105.63  Aligned_cols=294  Identities=15%  Similarity=0.119  Sum_probs=206.1

Q ss_pred             chhHHHHHHHHHHHHHhhhchHHHHHHHHHhcCCcc--hhHHHHHhhhchhhHHHHHHHhhhhcCCCCCCCCCCCCCCCC
Q 017456           13 TTMKIALLILNIILLAIGNCAGPLIMRLYFLHGGKR--IWFSSWLETAGCPVILIPITVSYLQRRRSGTTTDHESSTSSQ   90 (371)
Q Consensus        13 ~~~~~~~~~~~~~~~~~g~~~~~Ll~r~y~~~~g~~--~w~~t~vq~agfp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (371)
                      +..||.--.+|+.-.+.+-..--.+..+-|+..|=|  -|--|++|-.=..    -+.+.+.+--++             
T Consensus        37 ~kpkw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ys----g~glie~~~~~~-------------   99 (367)
T KOG1582|consen   37 DKPKWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYS----GFGLIELQLIQT-------------   99 (367)
T ss_pred             cCchhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHH----hhhheEEEeecc-------------
Confidence            455688888888777777666667777767766644  7999999972111    112211111000             


Q ss_pred             CCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHH
Q 017456           91 PSNNDDNKLILMRPPVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLL  170 (371)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl  170 (371)
                          .++   -.+.|   .|+.+..++.+...|-.-|+.|+.--+-.+..+.+++=+++.+.++-++|+.+.-..+..++
T Consensus       100 ----k~r---~iP~r---tY~~la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm  169 (367)
T KOG1582|consen  100 ----KRR---VIPWR---TYVILAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLM  169 (367)
T ss_pred             ----cce---ecchh---HhhhhHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHH
Confidence                011   11223   44444444444444444599999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcccCCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHH
Q 017456          171 TLGAVVLGLHTNGDRPDNESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGM  250 (371)
Q Consensus       171 ~~Ga~ll~~~~~s~~~~~~s~~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~vg~  250 (371)
                      .+|.++..+.|++..|+-     ..+|..+.-+|-+.=|+..=+.|+.+|+.. .    ..+||.+|...++.+++++.+
T Consensus       170 ~lGli~FTLADs~~sPNF-----~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~-~----ss~EmvfySy~iG~vflf~~m  239 (367)
T KOG1582|consen  170 SLGLIWFTLADSQTSPNF-----NLIGVMMISGALLADAVIGNVQEKAMKMNP-A----SSSEMVFYSYGIGFVFLFAPM  239 (367)
T ss_pred             HHHHHhhhhcccccCCCc-----ceeeHHHHHHHHHHHHHhhHHHHHHHhhCC-C----CcceEEEeeecccHHHHHHHH
Confidence            999999888887655533     469999999999999998888777776542 1    227999999999999999999


Q ss_pred             HHccchhhhhhhhhhhc--cccchhHHHHHHHHHHHHHHHHhhhhhhhhchhhHHHHHHHHHHHHHHHHHHHHhCCCCch
Q 017456          251 VVNKDFQAIGKEARAYT--LGEGKYYAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTEILAVIFYKEKFQA  328 (371)
Q Consensus       251 ~~~g~~~~l~~e~~~f~--~g~~~y~~~lv~~av~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPvt~ilavl~fge~~t~  328 (371)
                      ..+||.  .+.  +.|-  +..--|-..++-....+ +....+..++..-..+.+..+.|.+..++.+++.++|..++|.
T Consensus       240 vlTge~--f~a--~~fcaehp~~tyGy~~~~s~~gy-lG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~  314 (367)
T KOG1582|consen  240 VLTGEL--FSA--WTFCAEHPVRTYGYAFLFSLAGY-LGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTE  314 (367)
T ss_pred             Hhcccc--hhh--hHHHHhCcHhHHHHHHHHHHHhH-hhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHH
Confidence            999973  211  1111  11101111122221122 1123345556666666778888999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHhcc
Q 017456          329 EKGVSLALSLWGFASYFYGE  348 (371)
Q Consensus       329 ~k~ig~~Lvl~G~~~y~y~~  348 (371)
                      ...-++.+++.|+....|.+
T Consensus       315 qy~~~gllv~lgI~Ln~ysk  334 (367)
T KOG1582|consen  315 QYVWSGLLVVLGIYLNMYSK  334 (367)
T ss_pred             HHhhhhHHHHHHHHhhcccC
Confidence            99999999999999988877

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.21  E-value=2.6e-09  Score=101.81  Aligned_cols=306  Identities=13%  Similarity=0.208  Sum_probs=179.1

Q ss_pred             HHHHHHHHHhhhchHHHHHHHH--HhcCCc----chhHHHH-HhhhchhhHHHHHHHhh-hhcCCCCCCCCCCCCCCCCC
Q 017456           20 LILNIILLAIGNCAGPLIMRLY--FLHGGK----RIWFSSW-LETAGCPVILIPITVSY-LQRRRSGTTTDHESSTSSQP   91 (371)
Q Consensus        20 ~~~~~~~~~~g~~~~~Ll~r~y--~~~~g~----~~w~~t~-vq~agfp~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~   91 (371)
                      +++..+++..| +.-+++.++-  ...+|.    ...++++ ....+|-    ++.+++ .|+|+++++..++ .  +.-
T Consensus         5 v~ls~imvvsG-s~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEfl----Cl~vf~lir~~sn~~g~~s~-~--~~i   76 (372)
T KOG3912|consen    5 VFLSLIMVVSG-SFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFL----CLAVFKLIRLRSNGQGVSSD-L--DSI   76 (372)
T ss_pred             hhhhhhhhhhc-cHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHH----HHHHHHHHHHhhcCCCcccc-c--ccc
Confidence            55666777777 6677777774  333443    3443332 2233333    222222 2334333221110 0  000


Q ss_pred             CCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHH
Q 017456           92 SNNDDNKLILMRPPVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLT  171 (371)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~  171 (371)
                      ..++++|   +.|++++.=+++-+  .+..++|. |+++++++++..++-.-.+||.+|+.-+++++++.+||.|+....
T Consensus        77 lsq~~~p---f~p~lfl~Pal~Di--~gsslm~v-gL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~  150 (372)
T KOG3912|consen   77 LSQDSSP---FNPVLFLPPALCDI--AGSSLMYV-GLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVS  150 (372)
T ss_pred             cccccCC---CCcceecChHHHHH--hhhHHHHH-HHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHH
Confidence            1112222   33444444344444  66688886 999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcccCCCCC-CCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHH---
Q 017456          172 LGAVVLGLHTNGDRP-DNESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCT---  247 (371)
Q Consensus       172 ~Ga~ll~~~~~s~~~-~~~s~~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~---  247 (371)
                      +|.++++..|-..++ +....++.+.|+++.+.|-+.-|.-+.+-|+..+|.    . ...++..-|-++++...+.   
T Consensus       151 lGlviVg~~d~~~~~~p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~----n-V~pl~avg~eGlfG~v~~slL~  225 (372)
T KOG3912|consen  151 LGLVIVGSLDVHLVTDPYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKS----N-VAPLQAVGWEGLFGLVILSLLA  225 (372)
T ss_pred             hhhheeeeeecccccCCccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhc----c-CCHHHHhhhhhhHHHHHHHHHH
Confidence            998888755432111 111223457899999999999999888876665543    1 2334555555555522111   


Q ss_pred             --HHHHHccc-hhhhhhh-----hhhhc--cccchhHHHHHHHHHHHHHHHHhhhhhhhhchhhHHHHHHHHHHHHHH-H
Q 017456          248 --VGMVVNKD-FQAIGKE-----ARAYT--LGEGKYYAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTE-I  316 (371)
Q Consensus       248 --vg~~~~g~-~~~l~~e-----~~~f~--~g~~~y~~~lv~~av~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPvt~-i  316 (371)
                        +..+..|| +..-++.     ...|.  .+++...+.+.++.++...+-+.-..+..+.|+..-.+.-.++ ..+. +
T Consensus       226 i~m~yi~~~~sfS~~~~g~~eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lR-t~~IWv  304 (372)
T KOG3912|consen  226 IPMYYIPSGDSFSCNPRGVLEDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLR-TYVIWV  304 (372)
T ss_pred             HHHhheecCCcCcCCCCcchhhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhh-hhhhhH
Confidence              23334442 1111110     11121  3445555656666655444333322222233332333333333 2333 8


Q ss_pred             HHHHHhCCCCchhHHHHHHHHHHHHHHHH
Q 017456          317 LAVIFYKEKFQAEKGVSLALSLWGFASYF  345 (371)
Q Consensus       317 lavl~fge~~t~~k~ig~~Lvl~G~~~y~  345 (371)
                      ++...++|.|...++.|.++.+.|...|.
T Consensus       305 ~si~m~~E~f~llqilGFliLi~Gi~lY~  333 (372)
T KOG3912|consen  305 FSIAMGWEYFHLLQILGFLILIMGIILYN  333 (372)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            88888999999999999999999999984

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.17  E-value=6e-10  Score=103.75  Aligned_cols=242  Identities=13%  Similarity=0.112  Sum_probs=162.7

Q ss_pred             HHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccCCCCCCC
Q 017456          109 ASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDRPDN  188 (371)
Q Consensus       109 ~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~s~~~~~  188 (371)
                      .|+.+.+-+.+.-.--.-+++|.|--|..+=.+.+|+=+|+++.++.+++++|++-.++.+..+|+++..-.+..  -.+
T Consensus        87 ~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~K--v~g  164 (337)
T KOG1580|consen   87 MYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENK--VGG  164 (337)
T ss_pred             HHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccc--cCC
Confidence            444444444444444446899999999999999999999999999999999999999999999999888755432  112


Q ss_pred             cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHccchhhhhhhhhhhcc
Q 017456          189 ESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKEARAYTL  268 (371)
Q Consensus       189 ~s~~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~vg~~~~g~~~~l~~e~~~f~~  268 (371)
                      ..++...+|-++.+.+-..=|+-..+.++.++.+ ++...    .|++++.+-+++.+.+|++.+||..++-+=.++  +
T Consensus       165 ~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~y-q~~g~----~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~R--h  237 (337)
T KOG1580|consen  165 AEDKTFGFGELLLILSLAMDGLTGSIQDRIRASY-QRTGT----SMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQR--H  237 (337)
T ss_pred             CcccccchHHHHHHHHHHhcccchhHHHHHHHhh-ccCch----hhHHHHHHHHHHHhhhhheehhhHHHHHHHHHh--c
Confidence            2344467899999999888888777777776544 33333    667777777888888999999974322111110  1


Q ss_pred             ccchhHHHHH--HHHHHHHHHHHhhhhhhhhchhhHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHh
Q 017456          269 GEGKYYAVVV--ASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASYFY  346 (371)
Q Consensus       269 g~~~y~~~lv--~~av~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPvt~ilavl~fge~~t~~k~ig~~Lvl~G~~~y~y  346 (371)
                      -...|-+.++  ..++.+...+.    .+-.-+-+..+++.+-+.-.+.+.+|++|++++++.|++|..+++.+...   
T Consensus       238 P~~~~~l~l~ai~s~LGQ~fIF~----tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~---  310 (337)
T KOG1580|consen  238 PYVFWDLTLLAIASCLGQWFIFK----TVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTA---  310 (337)
T ss_pred             cHHHHHHHHHHHHHHhhhHHHHH----HHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhh---
Confidence            1111112222  22222222122    22233455567888888888999999999999999999999999987665   


Q ss_pred             ccccchhhh---hhhcCCCCCCCC
Q 017456          347 GEIKNKKKM---KKREQLPETEMP  367 (371)
Q Consensus       347 ~~~~~~~k~---~~~~~~~~~~~~  367 (371)
                       +-++.||+   ..|+|..|+|..
T Consensus       311 -D~~~GK~a~~t~akkp~~~~~~~  333 (337)
T KOG1580|consen  311 -DVVDGKKAPMTAAKKPLAATEPK  333 (337)
T ss_pred             -HhhcCCcCccccccCCCcCCCcc
Confidence             33344433   224444555544

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.14  E-value=2.5e-09  Score=103.70  Aligned_cols=225  Identities=12%  Similarity=0.140  Sum_probs=153.3

Q ss_pred             HHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccCCCCCCCcch
Q 017456          112 IIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDRPDNESA  191 (371)
Q Consensus       112 ~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~s~~~~~~s~  191 (371)
                      ..-+++.++-+.=..+++|+|+.+++++....++++++....++|.|++++.+.++++..+|+..-+..|.+.+      
T Consensus        82 P~~~lf~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~------  155 (314)
T KOG1444|consen   82 PVSLLFVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFN------  155 (314)
T ss_pred             cHHHHHHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceec------
Confidence            34455555555556799999999999999999999999999999999999999999999999887776665532      


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHccchhhhhhhhhhhccccc
Q 017456          192 RQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKEARAYTLGEG  271 (371)
Q Consensus       192 ~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~vg~~~~g~~~~l~~e~~~f~~g~~  271 (371)
                         ..|...++..-++-+.+....++..+.- +...+    ++.+|-.+++.++..+-.+..|||+.+..+-..+...  
T Consensus       156 ---~~gY~w~~~n~~~~a~~~v~~kk~vd~~-~l~~~----~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~--  225 (314)
T KOG1444|consen  156 ---LRGYSWALANCLTTAAFVVYVKKSVDSA-NLNKF----GLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDS--  225 (314)
T ss_pred             ---chhHHHHHHHHHHHHHHHHHHHHhhccc-cccce----eEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccch--
Confidence               3488888888888888888875544322 22233    7888999999999999888999986332221111111  


Q ss_pred             hhHHHHH-HHHHHHHHHHHhhhhhhhhchhhHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHhcccc
Q 017456          272 KYYAVVV-ASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASYFYGEIK  350 (371)
Q Consensus       272 ~y~~~lv-~~av~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPvt~ilavl~fge~~t~~k~ig~~Lvl~G~~~y~y~~~~  350 (371)
                      ..+..+. +.......-+-+.-. ....|+...+++-+.-+-.+.+..++++|+++++.+.+|..+.+.|-+.|.|..++
T Consensus       226 ~~~~~~~lScv~gf~isy~s~~c-t~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~  304 (314)
T KOG1444|consen  226 SVLVVMLLSCVMGFGISYTSFLC-TRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFR  304 (314)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHH-HhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhh
Confidence            1111111 111111111111000 01223333444443333556688888889999999999999999999999888765


Q ss_pred             chh
Q 017456          351 NKK  353 (371)
Q Consensus       351 ~~~  353 (371)
                      ++|
T Consensus       305 ~k~  307 (314)
T KOG1444|consen  305 KKK  307 (314)
T ss_pred             hcc
Confidence            543

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.14  E-value=2.1e-10  Score=112.43  Aligned_cols=221  Identities=13%  Similarity=0.147  Sum_probs=143.9

Q ss_pred             HHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccCCCCCCC
Q 017456          109 ASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDRPDN  188 (371)
Q Consensus       109 ~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~s~~~~~  188 (371)
                      --+.+|+.......+=..+++|.|||....+.++.|+|+.++++++.+|++++....+++....|+.+-..++.      
T Consensus        85 ~llpl~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~------  158 (316)
T KOG1441|consen   85 TLLPLGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTEL------  158 (316)
T ss_pred             HHHHHHHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccc------
Confidence            34456666677777777899999999999999999999999999999999999999999988888655544322      


Q ss_pred             cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHH--HHHHccchhhhhhhhhhh
Q 017456          189 ESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTV--GMVVNKDFQAIGKEARAY  266 (371)
Q Consensus       189 ~s~~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~v--g~~~~g~~~~l~~e~~~f  266 (371)
                         +-+..|++.++++-+.+++..++.+...++-  +++ ...++..-|++-++.+.+++  -...+|+- ....+...|
T Consensus       159 ---~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~--~~~-~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~-~~~~~~~~~  231 (316)
T KOG1441|consen  159 ---SFNLFGFISAMISNLAFALRNILSKKLLTSK--GES-LNSMNLLYYTAPISLIFLLIPFLDYVEGNK-FVGFLTAPW  231 (316)
T ss_pred             ---cccHHHHHHHHHHHHHHHHHHHHHHHhhhcc--ccc-cCchHHHHHhhhHHHHHHhcchHhhhcccc-eeeeecccc
Confidence               1257999999999999999888877766421  111 23456666666666555552  22223321 100011111


Q ss_pred             ccccchhHHHHHHHHHHHHHHHHhhh----hhhhhchhhHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHH
Q 017456          267 TLGEGKYYAVVVASALIWQCFFLGAI----GVIYCGSSLLSAIIIAVLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFA  342 (371)
Q Consensus       267 ~~g~~~y~~~lv~~av~~q~~~~g~~----Glv~~~ssl~~~vv~t~~lPvt~ilavl~fge~~t~~k~ig~~Lvl~G~~  342 (371)
                      +..   ++..+...     +|...++    -++-.+|.++.++....-=-++.+.++++|+|+.|+.++.|.++++.|+.
T Consensus       232 ~~~---~~~~~~~s-----v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~  303 (316)
T KOG1441|consen  232 FVT---FLILLLNS-----VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVF  303 (316)
T ss_pred             chh---hHHHHHHH-----HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHH
Confidence            111   12112222     3333322    22224555555444322212344778899999999999999999999998


Q ss_pred             HHHhcccc
Q 017456          343 SYFYGEIK  350 (371)
Q Consensus       343 ~y~y~~~~  350 (371)
                      .|.+.+.+
T Consensus       304 ~Y~~~k~~  311 (316)
T KOG1441|consen  304 LYSRAKLK  311 (316)
T ss_pred             HHHHHhhh
Confidence            87765543

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.09  E-value=5.1e-11  Score=112.59  Aligned_cols=204  Identities=15%  Similarity=0.176  Sum_probs=133.0

Q ss_pred             HHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhc-----ccCCCCCCCcch-
Q 017456          118 GLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGL-----HTNGDRPDNESA-  191 (371)
Q Consensus       118 ~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~-----~~~s~~~~~~s~-  191 (371)
                      .+-.++| |++.|+|.+-+++|..+.|.||.+|++.++|||+|++..++..+...|++++.-     +++.+. .+++. 
T Consensus       109 tgvmlmy-ya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g-~~~s~~  186 (346)
T KOG4510|consen  109 TGVMLMY-YALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEG-EDSSQV  186 (346)
T ss_pred             hHHHHHH-HHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccc-cccccc
Confidence            4445667 699999999999999999999999999999999999999999999999988752     222111 11111 


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHccchhhhhhhhhhhccccc
Q 017456          192 RQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKEARAYTLGEG  271 (371)
Q Consensus       192 ~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~vg~~~~g~~~~l~~e~~~f~~g~~  271 (371)
                      .....|-..++.+.+.-|--.++    .|+++|+-++.+.+   -|.++++.+..++|...-|++ .+|+..+++-    
T Consensus       187 ~~~~~gt~aai~s~lf~asvyIi----lR~iGk~~h~~msv---syf~~i~lV~s~I~~~~ig~~-~lP~cgkdr~----  254 (346)
T KOG4510|consen  187 EYDIPGTVAAISSVLFGASVYII----LRYIGKNAHAIMSV---SYFSLITLVVSLIGCASIGAV-QLPHCGKDRW----  254 (346)
T ss_pred             cccCCchHHHHHhHhhhhhHHHH----HHHhhccccEEEEe---hHHHHHHHHHHHHHHhhccce-ecCccccceE----
Confidence            12245655555544444432222    36676766664333   355788888888888888877 5766433220    


Q ss_pred             hhHHHHHHHHHHHHHHHHhhhhhhhhchhhH---H--HHHHHHHHHHHH-HHHHHHhCCCCchhHHHHHHHHHHHHHHHH
Q 017456          272 KYYAVVVASALIWQCFFLGAIGVIYCGSSLL---S--AIIIAVLLPVTE-ILAVIFYKEKFQAEKGVSLALSLWGFASYF  345 (371)
Q Consensus       272 ~y~~~lv~~av~~q~~~~g~~Glv~~~ssl~---~--~vv~t~~lPvt~-ilavl~fge~~t~~k~ig~~Lvl~G~~~y~  345 (371)
                       .+..+.         ..|..|.+..+-++-   +  +-++++...+-+ +..+++||+.+|+..++|+++++.....-.
T Consensus       255 -l~~~lG---------vfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a  324 (346)
T KOG4510|consen  255 -LFVNLG---------VFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVA  324 (346)
T ss_pred             -EEEEeh---------hhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHH
Confidence             000000         122223333333332   1  233556666656 889999999999999999999886555443

>TIGR00803 nst UDP-galactose transporter

Probab=99.08  E-value=1.9e-09  Score=100.24  Aligned_cols=202  Identities=16%  Similarity=0.167  Sum_probs=112.6

Q ss_pred             ChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccCC----------------CC-C-CCcchhh
Q 017456          132 PVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNG----------------DR-P-DNESARQ  193 (371)
Q Consensus       132 pvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~s----------------~~-~-~~~s~~~  193 (371)
                      ++..+.+..+.+++++++..+.+.++|++..|+.+.++++.|++.-.+.+.+                ++ + .....++
T Consensus         3 svPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g~   82 (222)
T TIGR00803         3 SVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFGN   82 (222)
T ss_pred             cccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCcccccccc
Confidence            3344666667777777777777777777777777776666665542222110                00 0 0112234


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHccchhhhhhhhhhhccccchh
Q 017456          194 YLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKEARAYTLGEGKY  273 (371)
Q Consensus       194 ~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~vg~~~~g~~~~l~~e~~~f~~g~~~y  273 (371)
                      ...|..+.+.+....++-..+.|+.+|+. +...|...+++.    +...+....+.... +.+..+.  .++.+|....
T Consensus        83 ~~~g~~~~l~a~~~~~~~~~y~e~~~k~~-~~~~~~~~~~l~----~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~  154 (222)
T TIGR00803        83 PVVGLSAVLSALLSSGFAGVYFEKILKDG-DTMFWSRNLQLP----LFGLFSTFSVLLWS-DGTLISN--FGFFIGYPTA  154 (222)
T ss_pred             HHHHHHHHHHHHHHHhhhHHHHHHcccCC-CCchHHHHHHHH----HHHHHHHHHHHhhc-ccchhhc--cCcccCCchH
Confidence            57788888888877777666655443211 111111122222    22222212333322 2211211  2333443333


Q ss_pred             HHHHHHHHHHHHHHHHhhhhhhhhchhhHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHH
Q 017456          274 YAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASY  344 (371)
Q Consensus       274 ~~~lv~~av~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPvt~ilavl~fge~~t~~k~ig~~Lvl~G~~~y  344 (371)
                      ...++.+...-+.   -+.....+.+++..+++.+.++.++.++++++|||+++..+++|+.+++.|...|
T Consensus       155 ~~~~~~~~a~~~~---~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       155 VWIVGLLNVGGGL---CIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             HHHHHHHHHhcCc---eeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence            3223322222222   2556666888889999999997778899999999999999999999999876554

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=98.93  E-value=4.7e-08  Score=94.20  Aligned_cols=223  Identities=16%  Similarity=0.249  Sum_probs=156.7

Q ss_pred             HHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccCCCCCCC
Q 017456          109 ASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDRPDN  188 (371)
Q Consensus       109 ~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~s~~~~~  188 (371)
                      -|..+++.-.....+=..+++|++--|.++-.+.+.+=+|+...++.|+|++...-....+.+.|+.+..+.+.+|.+.+
T Consensus        85 ~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~  164 (327)
T KOG1581|consen   85 KYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSK  164 (327)
T ss_pred             HHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccc
Confidence            44555555555544444699999999999999999999999999999999999999999999999988887766553333


Q ss_pred             cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHccchh-hhhhhhhhhc
Q 017456          189 ESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQ-AIGKEARAYT  267 (371)
Q Consensus       189 ~s~~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~vg~~~~g~~~-~l~~e~~~f~  267 (371)
                      ..+.+..+|+.+..+.-++=|+--.-.+..+++.     -.....|++++.+..++....+++..|.+. .+.--.   .
T Consensus       165 ~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~-----k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~---~  236 (327)
T KOG1581|consen  165 SGRENSPIGILLLFGYLLFDGFTNATQDSLFKKY-----KVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIK---E  236 (327)
T ss_pred             cCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccC-----CccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHH---c
Confidence            2334668999998887777777333344444422     223458899999999999999988777543 111000   0


Q ss_pred             cccchhHHHHHHHHHHHHHHHHhhhhhhhhc------hhhHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHH
Q 017456          268 LGEGKYYAVVVASALIWQCFFLGAIGVIYCG------SSLLSAIIIAVLLPVTEILAVIFYKEKFQAEKGVSLALSLWGF  341 (371)
Q Consensus       268 ~g~~~y~~~lv~~av~~q~~~~g~~Glv~~~------ssl~~~vv~t~~lPvt~ilavl~fge~~t~~k~ig~~Lvl~G~  341 (371)
                      +-+...-+.+.++        .|.+|..+.-      .++.-..|.+.++-++.+++.++||.+.+..+++|..+++.|.
T Consensus       237 hp~~~~Di~l~s~--------~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i  308 (327)
T KOG1581|consen  237 HPDVAFDILLYST--------CGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGI  308 (327)
T ss_pred             ChhHHHHHHHHHH--------hhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHH
Confidence            1221222222222        2333443322      2455577788888889999999999999999999999999776


Q ss_pred             HHHHhc
Q 017456          342 ASYFYG  347 (371)
Q Consensus       342 ~~y~y~  347 (371)
                      ..=.|-
T Consensus       309 ~l~~~~  314 (327)
T KOG1581|consen  309 FLEILL  314 (327)
T ss_pred             HHHHHH
Confidence            654443

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.84  E-value=1.4e-08  Score=85.00  Aligned_cols=78  Identities=19%  Similarity=0.366  Sum_probs=68.1

Q ss_pred             hHHHHHHHHHHHHH-HHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccCC
Q 017456          105 PVFFASAIIGILTG-LDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNG  183 (371)
Q Consensus       105 ~~~~~~~~~G~l~~-~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~s  183 (371)
                      |.....+..|++.. .++.+|.++++|.| +..+.+.++.|+|+++++.+++|||++++++.++++.++|++++..++.+
T Consensus        32 ~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   32 KPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence            33345566676665 88999999999999 58889999999999999999999999999999999999999999877754

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=98.77  E-value=7e-07  Score=84.30  Aligned_cols=208  Identities=17%  Similarity=0.186  Sum_probs=126.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccCCC
Q 017456          105 PVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGD  184 (371)
Q Consensus       105 ~~~~~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~s~  184 (371)
                      ++....+.+|+-++..|++|-.++..+|.+++.-+-.+.|+-.++++    .+|..-.  ..+.++..|..++.-...+.
T Consensus        69 ~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAiEF~GPL~vA~~~----sRr~~d~--vwvaLAvlGi~lL~p~~~~~  142 (292)
T COG5006          69 PQRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAIEFTGPLAVALLS----SRRLRDF--VWVALAVLGIWLLLPLGQSV  142 (292)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccHHHHHHHh----ccchhhH--HHHHHHHHHHHhheeccCCc
Confidence            44456777899889889888889999999999999999999888765    4444433  34555667776665332211


Q ss_pred             CCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHH-HHHHHHHHHccchhhhhhhh
Q 017456          185 RPDNESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFAT-LVCTVGMVVNKDFQAIGKEA  263 (371)
Q Consensus       185 ~~~~~s~~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat-~~~~vg~~~~g~~~~l~~e~  263 (371)
                      +      .-+..|..++++|+++|++|+..+|+.-+..  +.+..+..-     .+++. +++-+|..-.|. ..+..+.
T Consensus       143 ~------~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~--~g~~g~a~g-----m~vAaviv~Pig~~~ag~-~l~~p~l  208 (292)
T COG5006         143 W------SLDPVGVALALGAGACWALYIVLGQRAGRAE--HGTAGVAVG-----MLVAALIVLPIGAAQAGP-ALFSPSL  208 (292)
T ss_pred             C------cCCHHHHHHHHHHhHHHHHHHHHcchhcccC--CCchHHHHH-----HHHHHHHHhhhhhhhcch-hhcChHH
Confidence            1      1246999999999999999999987665421  112111221     22333 223355433332 1111110


Q ss_pred             hhhccccchhHHHHHHHHHHHHHHHHhhhhhhhhchhhHHHHHHHHHHHHHH-HHHHHHhCCCCchhHHHHHHHHHHHHH
Q 017456          264 RAYTLGEGKYYAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTE-ILAVIFYKEKFQAEKGVSLALSLWGFA  342 (371)
Q Consensus       264 ~~f~~g~~~y~~~lv~~av~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPvt~-ilavl~fge~~t~~k~ig~~Lvl~G~~  342 (371)
                      -     ....-+.+.++++-|.+=-+....+   -.+.| ++...++ |... +.+++++||.+|..|+.|.++++.+.+
T Consensus       209 l-----~laLgvavlSSalPYsLEmiAL~rl---p~~~F-~~LlSLe-Pa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsa  278 (292)
T COG5006         209 L-----PLALGVAVLSSALPYSLEMIALRRL---PARTF-GTLLSLE-PALAALSGLIFLGETLTLIQWLAIAAVIAASA  278 (292)
T ss_pred             H-----HHHHHHHHHhcccchHHHHHHHhhC---ChhHH-HHHHHhh-HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence            0     0001112334444444333332222   11212 3444444 8766 999999999999999999999996554

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=98.71  E-value=7.2e-09  Score=98.51  Aligned_cols=235  Identities=18%  Similarity=0.234  Sum_probs=149.6

Q ss_pred             HHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccCCCCCCC
Q 017456          109 ASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDRPDN  188 (371)
Q Consensus       109 ~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~s~~~~~  188 (371)
                      +.++.=.++..||+    .++|.|++-+-+=++...+||.+++|+++|||-+..-..+-.+..+|   ..++.++++   
T Consensus       108 lsvVfi~mI~fnnl----cL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~G---F~lGvdqE~---  177 (347)
T KOG1442|consen  108 LSVVFILMISFNNL----CLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILG---FGLGVDQEG---  177 (347)
T ss_pred             hhheeeeehhccce----ehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheeh---heecccccc---
Confidence            44444344477775    57799999999999999999999999999999888776655443333   223333321   


Q ss_pred             cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHccchhhhhhhhhhhcc
Q 017456          189 ESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKEARAYTL  268 (371)
Q Consensus       189 ~s~~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~vg~~~~g~~~~l~~e~~~f~~  268 (371)
                      .++.-...|.+.-+.|++.-|+.-+..    ||.... .-.-+-...+|..+.|.+.++..++++||++.+    .+|.+
T Consensus       178 ~~~~ls~~GvifGVlaSl~vAlnaiyt----kk~l~~-v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v----~~~~~  248 (347)
T KOG1442|consen  178 STGTLSWIGVIFGVLASLAVALNAIYT----KKVLPP-VGDCIWRLTAYNNVNALLLFLPLLILNGEFQAV----VGFPH  248 (347)
T ss_pred             ccCccchhhhHHHHHHHHHHHHHHHhh----heeccc-ccCeehhhHHHHHHHHHHHHHHHHHHcchHHHH----cCccc
Confidence            122234689999999999998866554    333211 111233678899999999999999999998755    23322


Q ss_pred             -ccchhHHHHH-HHHHHHHHHHHhhhhh-hhhchhhHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHH
Q 017456          269 -GEGKYYAVVV-ASALIWQCFFLGAIGV-IYCGSSLLSAIIIAVLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASYF  345 (371)
Q Consensus       269 -g~~~y~~~lv-~~av~~q~~~~g~~Gl-v~~~ssl~~~vv~t~~lPvt~ilavl~fge~~t~~k~ig~~Lvl~G~~~y~  345 (371)
                       +.+.+|..+. +....+...++.  |. +..+|.++-++--+..-..-.++|+.+++|.-+...+-+-.+++.|-..|.
T Consensus       249 l~a~~Fw~~mtLsglfgF~mgyvT--g~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT  326 (347)
T KOG1442|consen  249 LPAIKFWILMTLSGLFGFAMGYVT--GWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYT  326 (347)
T ss_pred             chHHHHHHHHHHHHHHHHHhhhee--eEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHH
Confidence             1223333222 222222221111  22 224455554554444434455999999999999999999999999999998


Q ss_pred             hccccchhhhhhhcCCCCCC
Q 017456          346 YGEIKNKKKMKKREQLPETE  365 (371)
Q Consensus       346 y~~~~~~~k~~~~~~~~~~~  365 (371)
                      +.+-.+.+|+. +++++.+|
T Consensus       327 ~vk~~em~~~~-~~~s~~~~  345 (347)
T KOG1442|consen  327 LVKEHEMRKAS-AQRSPATQ  345 (347)
T ss_pred             HHHHHHHHhhc-cCCCcccc
Confidence            77644443332 33444444

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=98.66  E-value=2.3e-07  Score=76.57  Aligned_cols=120  Identities=16%  Similarity=0.271  Sum_probs=86.0

Q ss_pred             hHHHHHHHHHhcCCcchhHHHHHhhhchhhHHHHHHHhhhhcCCCCCCCCCCCCCCCCCCCCCCCccccCChhHHHHHHH
Q 017456           33 AGPLIMRLYFLHGGKRIWFSSWLETAGCPVILIPITVSYLQRRRSGTTTDHESSTSSQPSNNDDNKLILMRPPVFFASAI  112 (371)
Q Consensus        33 ~~~Ll~r~y~~~~g~~~w~~t~vq~agfp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  112 (371)
                      ....+.|...++ -+..++..+-...+.+ +++...+. .+++..                       ..+++.+...+.
T Consensus         5 ~~~~~~k~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~-----------------------~~~~~~~~~~~~   58 (126)
T PF00892_consen    5 IYSVFSKKLLKK-ISPLSITFWRFLIAGI-LLILLLIL-GRKPFK-----------------------NLSPRQWLWLLF   58 (126)
T ss_pred             eHHHHHHHHhcc-CCHHHHHHHHHHHHHH-HHHHHHhh-cccccc-----------------------CCChhhhhhhhH
Confidence            345556665555 4556666666666665 33333332 111101                       122244445556


Q ss_pred             HHHH-HHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHh
Q 017456          113 IGIL-TGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLG  178 (371)
Q Consensus       113 ~G~l-~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~  178 (371)
                      .|++ .+..+.+|.++++++|++..+.+..++|+++++++++++|||++++++.|+++..+|++++.
T Consensus        59 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   59 LGLLGTALAYLLYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             hhccceehHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            6665 58889999999999999999999999999999999999999999999999999999987653

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=98.55  E-value=1.2e-06  Score=80.02  Aligned_cols=213  Identities=15%  Similarity=0.245  Sum_probs=138.0

Q ss_pred             HHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccCCCCCCCcch
Q 017456          112 IIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDRPDNESA  191 (371)
Q Consensus       112 ~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~s~~~~~~s~  191 (371)
                      ..-+++.+.|++|..+++.++++.+|-+.+-.-+|+-+++++.+|+|+.-.++.+.+++..|+++++..|.       ..
T Consensus        58 PF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN-------~~  130 (290)
T KOG4314|consen   58 PFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADN-------EH  130 (290)
T ss_pred             ceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccc-------hh
Confidence            34566788899999999999999999999999999999999999999999999999999999888874332       12


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHH---HHHH---HHHHHccchhhhhhhhhh
Q 017456          192 RQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFAT---LVCT---VGMVVNKDFQAIGKEARA  265 (371)
Q Consensus       192 ~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat---~~~~---vg~~~~g~~~~l~~e~~~  265 (371)
                      +..++|+.++++++...++|=.+    +|+.+...++   -|..-++|..+-   ++.-   +-+..+|- +.+    +.
T Consensus       131 a~e~iGi~~AV~SA~~aAlYKV~----FK~~iGnAn~---Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~V-E~~----qs  198 (290)
T KOG4314|consen  131 ADEIIGIACAVGSAFMAALYKVL----FKMFIGNANF---GDAAHFMSCLGFFNLCFISFPALILAFTGV-EHL----QS  198 (290)
T ss_pred             hhhhhhHHHHHHHHHHHHHHHHH----HHHHhccCcc---hhHHHHHHHHHHHHHHHHhhhHHHHHHhch-HHH----HH
Confidence            34689999999999999996554    6776644332   122222222221   1110   11222331 111    11


Q ss_pred             hccccchhHHHHHHHHHHHHHHHHhh-hhhhhhchhhHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHH
Q 017456          266 YTLGEGKYYAVVVASALIWQCFFLGA-IGVIYCGSSLLSAIIIAVLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASY  344 (371)
Q Consensus       266 f~~g~~~y~~~lv~~av~~q~~~~g~-~Glv~~~ssl~~~vv~t~~lPvt~ilavl~fge~~t~~k~ig~~Lvl~G~~~y  344 (371)
                      |...+   |-.+.+.+..|.++-..+ +|+ .....+.-++=+.+.+|..+..-.++=+-.++.....|..++..||...
T Consensus       199 FA~~P---WG~l~G~A~L~lAFN~~iN~Gi-aL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLi  274 (290)
T KOG4314|consen  199 FAAAP---WGCLCGAAGLSLAFNFLINFGI-ALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILI  274 (290)
T ss_pred             HhhCC---chhhhhHHHHHHHHhhheeehh-hhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHhe
Confidence            21111   112455555555544331 222 1111222222244666887777777777788888999999999998876


Q ss_pred             Hhc
Q 017456          345 FYG  347 (371)
Q Consensus       345 ~y~  347 (371)
                      +..
T Consensus       275 iiP  277 (290)
T KOG4314|consen  275 IIP  277 (290)
T ss_pred             ecc
Confidence            543

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=98.30  E-value=7.7e-05  Score=71.84  Aligned_cols=114  Identities=15%  Similarity=0.145  Sum_probs=89.3

Q ss_pred             ChhHHHHHHHHHHHHHHHHHHHHhccCCCChhHHHHH-HHHhHHHHHHHHHHHhccccchhHH----HHHHHHHHHHHHH
Q 017456          103 RPPVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLI-IASQLAFTAAFAFLLVKQKLTSYSL----NAVFLLTLGAVVL  177 (371)
Q Consensus       103 ~~~~~~~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli-~ssql~Ftalfs~l~~kek~t~~~i----~~vvLl~~Ga~ll  177 (371)
                      +++.++.+++.|++.+..|..-..|++++.+|..-=+ ...|++.|.+.++++++|--+..+.    .++++..+|+.+.
T Consensus        41 ~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lt  120 (269)
T PF06800_consen   41 SGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILT  120 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHh
Confidence            3488999999999999998887778888777665433 3789999999999999998776654    4888888898887


Q ss_pred             hcccCCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 017456          178 GLHTNGDRPDNESARQYLVGFLMTIGAAVLYGFVLPLMEL  217 (371)
Q Consensus       178 ~~~~~s~~~~~~s~~~~~~G~~l~l~Aa~~~alyl~l~e~  217 (371)
                      ..++..++. ++++++..-|....+++++.|..|-.+.+.
T Consensus       121 s~~~~~~~~-~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~  159 (269)
T PF06800_consen  121 SYQDKKSDK-SSSKSNMKKGILALLISTIGYWIYSVIPKA  159 (269)
T ss_pred             ccccccccc-cccccchhhHHHHHHHHHHHHHHHHHHHHh
Confidence            777654332 122445567999999999999999988544

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=98.25  E-value=1.1e-07  Score=89.85  Aligned_cols=212  Identities=13%  Similarity=0.176  Sum_probs=137.8

Q ss_pred             HHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccCCCCCCCc
Q 017456          110 SAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDRPDNE  189 (371)
Q Consensus       110 ~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~s~~~~~~  189 (371)
                      |+++|+.=.-.|++-..+++|++..+..++-+=..+-+++++|+++|-|+.+.|+.|++++..|++++.+.|-..+ +..
T Consensus        81 Yilla~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~ag-d~a  159 (336)
T KOG2766|consen   81 YILLAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAG-DRA  159 (336)
T ss_pred             hhheeEEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccc-ccc
Confidence            6666654444577777899999999999999999999999999999999999999999999999988876664321 111


Q ss_pred             chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHccc-hhhhhhhhhhhcc
Q 017456          190 SARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKD-FQAIGKEARAYTL  268 (371)
Q Consensus       190 s~~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~vg~~~~g~-~~~l~~e~~~f~~  268 (371)
                      ++.+...||++.+++|-+||+-=..-|..-||.    .   ..|..-..++++++...+-.+.+.. -..+..   +++.
T Consensus       160 ggsnp~~GD~lvi~GATlYaVSNv~EEflvkn~----d---~~elm~~lgLfGaIIsaIQ~i~~~~~~~tl~w---~~~i  229 (336)
T KOG2766|consen  160 GGSNPVKGDFLVIAGATLYAVSNVSEEFLVKNA----D---RVELMGFLGLFGAIISAIQFIFERHHVSTLHW---DSAI  229 (336)
T ss_pred             CCCCCccCcEEEEecceeeeeccccHHHHHhcC----c---HHHHHHHHHHHHHHHHHHHHhhhccceeeEee---hHHH
Confidence            234568999999999999999544444444433    2   2355666688888777776555542 112211   1111


Q ss_pred             ccchhHHHHHHHHHHHHHHHHhhhhhhhhchh--hHHHHHHHHHHHHHH-HHHH--HHhCCCCchhHHHHHHHHHHHHHH
Q 017456          269 GEGKYYAVVVASALIWQCFFLGAIGVIYCGSS--LLSAIIIAVLLPVTE-ILAV--IFYKEKFQAEKGVSLALSLWGFAS  343 (371)
Q Consensus       269 g~~~y~~~lv~~av~~q~~~~g~~Glv~~~ss--l~~~vv~t~~lPvt~-ilav--l~fge~~t~~k~ig~~Lvl~G~~~  343 (371)
                      +      .....++...+++--+. +...++|  .+.     +. -+++ .-++  -.||-+++|.-.++.+.+..|+..
T Consensus       230 ~------~yl~f~L~MFllYsl~p-il~k~~~aT~~n-----ls-lLTsDmwsl~i~~FgYhv~wLY~laF~~i~~Glii  296 (336)
T KOG2766|consen  230 F------LYLRFALTMFLLYSLAP-ILIKTNSATMFN-----LS-LLTSDMWSLLIRTFGYHVDWLYFLAFATIATGLII  296 (336)
T ss_pred             H------HHHHHHHHHHHHHHhhH-HheecCCceEEE-----hh-HhHHHHHHHHHHHHhcchhhhhHHHHHHHHHhhEE
Confidence            1      12223333333332222 2222222  111     11 1222 2222  557888999999999999999999


Q ss_pred             HH
Q 017456          344 YF  345 (371)
Q Consensus       344 y~  345 (371)
                      |.
T Consensus       297 Ys  298 (336)
T KOG2766|consen  297 YS  298 (336)
T ss_pred             ee
Confidence            83

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=98.16  E-value=2.2e-05  Score=73.20  Aligned_cols=209  Identities=16%  Similarity=0.178  Sum_probs=130.4

Q ss_pred             HHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccCCCCCCCcchhhhHHHHHH
Q 017456          121 NYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDRPDNESARQYLVGFLM  200 (371)
Q Consensus       121 n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~s~~~~~~s~~~~~~G~~l  200 (371)
                      -+--+.+++|+|+..+++...+..+..+..-.+++|.|.|.....+-+++.++.+.-.++|.+.....  .+..-.|.+.
T Consensus        82 Iyt~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~--~~~lN~GY~W  159 (309)
T COG5070          82 IYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFK--AQILNPGYLW  159 (309)
T ss_pred             HHhcccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHH--hcccCCceEE
Confidence            33445789999999999999999999999999999999999999999999998877777765321100  0011235555


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHccchhhhhhhhhhhccccchhHHHHHHH
Q 017456          201 TIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKEARAYTLGEGKYYAVVVAS  280 (371)
Q Consensus       201 ~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~vg~~~~g~~~~l~~e~~~f~~g~~~y~~~lv~~  280 (371)
                      .....+..+.|...+    ||.+|...+ -=.|-.+|..+.+.+.++.--+...||. -..-+.++..-.      +.|-
T Consensus       160 m~~NclssaafVL~m----rkri~ltNf-~d~dtmfYnNllslPiL~~~s~~~edws-~~n~annl~~d~------l~am  227 (309)
T COG5070         160 MFTNCLSSAAFVLIM----RKRIKLTNF-KDFDTMFYNNLLSLPILLSFSFLFEDWS-PGNLANNLSVDS------LMAM  227 (309)
T ss_pred             EehhhHhHHHHHHHH----HHhhccccc-chhhHHHHhhhHHHHHHHHHHHHhccCC-cchhhcCCChHH------HHHH
Confidence            555566666666665    443333222 1137889999999888885444444664 111122332111      1111


Q ss_pred             HHHHHHHHHhhhhhhhh-------chhhHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHhc
Q 017456          281 ALIWQCFFLGAIGVIYC-------GSSLLSAIIIAVLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASYFYG  347 (371)
Q Consensus       281 av~~q~~~~g~~Glv~~-------~ssl~~~vv~t~~lPvt~ilavl~fge~~t~~k~ig~~Lvl~G~~~y~y~  347 (371)
                      ++ -.   +.-+|.-++       +||-..+.+..+-.-..++.+.++|+|+.+..++.+..+-+..-+.|.+.
T Consensus       228 ~I-Sg---l~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYava  297 (309)
T COG5070         228 FI-SG---LCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVA  297 (309)
T ss_pred             HH-HH---HHHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHH
Confidence            11 11   222333332       22333344433333345688899999999999999988877666666554

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.15  E-value=1.8e-05  Score=66.44  Aligned_cols=64  Identities=19%  Similarity=0.279  Sum_probs=59.8

Q ss_pred             HHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHh
Q 017456          115 ILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLG  178 (371)
Q Consensus       115 ~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~  178 (371)
                      +.++...+++.++++.+|+|.+-.+-++.++++++.+++++|||+|++|+.|+++..+|+++++
T Consensus        45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            4467789999999999999999999999999999999999999999999999999999998876

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.06  E-value=0.00014  Score=72.93  Aligned_cols=71  Identities=13%  Similarity=0.129  Sum_probs=62.8

Q ss_pred             HHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccCC
Q 017456          113 IGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNG  183 (371)
Q Consensus       113 ~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~s  183 (371)
                      .|+..++...+|.+++++++++..++....+|+|++++++++++|++++.++.|.++...|+.+...+...
T Consensus       262 ~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~~~  332 (358)
T PLN00411        262 MAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGKAN  332 (358)
T ss_pred             HHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhhhh
Confidence            44445667889999999999999999999999999999999999999999999999999998887765443

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=98.01  E-value=6.7e-05  Score=73.56  Aligned_cols=79  Identities=24%  Similarity=0.357  Sum_probs=65.1

Q ss_pred             CChhHHHHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhccc
Q 017456          102 MRPPVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHT  181 (371)
Q Consensus       102 ~~~~~~~~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~  181 (371)
                      +.++.|.+...   +++.++.+-..++.+.|.+.-+-+.+.+++++++++.+++|||++++.+.|.++..+|++++....
T Consensus        48 l~~~~W~~G~~---~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~  124 (300)
T PF05653_consen   48 LRRPLWWIGLL---LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFA  124 (300)
T ss_pred             HhhHHHHHHHH---HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeC
Confidence            44566666553   345556666679999999999999999999999999999999999999999999999998876554


Q ss_pred             CC
Q 017456          182 NG  183 (371)
Q Consensus       182 ~s  183 (371)
                      ..
T Consensus       125 ~~  126 (300)
T PF05653_consen  125 PK  126 (300)
T ss_pred             CC
Confidence            43

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=97.99  E-value=0.00016  Score=67.93  Aligned_cols=70  Identities=17%  Similarity=0.256  Sum_probs=59.5

Q ss_pred             hHHHHHHHHHHH-HHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHH
Q 017456          105 PVFFASAIIGIL-TGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGA  174 (371)
Q Consensus       105 ~~~~~~~~~G~l-~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga  174 (371)
                      +.+...+..|++ .+....+|.++++++|++..+++..++|++++++++++++||+++.++.|.++...|+
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       189 LQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            444444445543 3567888999999999999999999999999999999999999999999999988875

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=97.88  E-value=0.00028  Score=61.06  Aligned_cols=131  Identities=11%  Similarity=0.067  Sum_probs=91.5

Q ss_pred             hHHHHHHHHHhc------CCcchhHHHHHhhhchhhHHHHHHHhhhhcCCCCCCCCCCCCCCCCCCCCCCCccccCChhH
Q 017456           33 AGPLIMRLYFLH------GGKRIWFSSWLETAGCPVILIPITVSYLQRRRSGTTTDHESSTSSQPSNNDDNKLILMRPPV  106 (371)
Q Consensus        33 ~~~Ll~r~y~~~------~g~~~w~~t~vq~agfp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (371)
                      .-..+.+..+.+      .-+..=+.......++++++++.++.-..+...    ..        ....+.+. ..+++.
T Consensus        14 l~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~----~~--------~~~~~~~~-~~~~~~   80 (153)
T PF03151_consen   14 LRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSS----FF--------SEIFGEEL-SSDPNF   80 (153)
T ss_pred             HHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh----HH--------HHhhhhhh-cchHHH
Confidence            344455555554      334455666777778888777766642111110    00        00000000 013466


Q ss_pred             HHHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHH
Q 017456          107 FFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVV  176 (371)
Q Consensus       107 ~~~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~l  176 (371)
                      +..-+..|++..+.|+.-.+-++++++.+++++...+-+++.++++++++|++|..++.|++++++|..+
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~  150 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLL  150 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhe
Confidence            6677778888888899988899999999999999999999999999999999999999999999999653

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>COG2510 Predicted membrane protein [Function unknown]

Probab=97.83  E-value=1.2e-05  Score=68.87  Aligned_cols=77  Identities=16%  Similarity=0.327  Sum_probs=70.6

Q ss_pred             CChhHHHHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHh
Q 017456          102 MRPPVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLG  178 (371)
Q Consensus       102 ~~~~~~~~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~  178 (371)
                      .++|.+...++.|+..++.-++|..+++.=++|--.=+-.++++++++++++++|||.|..+++|+++.++|++++.
T Consensus        62 ~~~k~~lflilSGla~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          62 IGPKSWLFLILSGLAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             cCcceehhhhHHHHHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            45677888899999999999999999999888888888999999999999999999999999999999999998765

>PRK11689 aromatic amino acid exporter; Provisional

Probab=97.83  E-value=0.00039  Score=67.48  Aligned_cols=75  Identities=17%  Similarity=0.184  Sum_probs=64.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhc
Q 017456          105 PVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGL  179 (371)
Q Consensus       105 ~~~~~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~  179 (371)
                      ..+...+..|+..+.-..+|.++++++|++..+++...+|++++++++++++|++++.++.|.++.+.|+.+...
T Consensus       213 ~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~  287 (295)
T PRK11689        213 PAIIKLLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWL  287 (295)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhh
Confidence            344444455666677799999999999999999999999999999999999999999999999999999766653

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=97.82  E-value=0.00082  Score=65.14  Aligned_cols=70  Identities=21%  Similarity=0.231  Sum_probs=60.6

Q ss_pred             HHHHHH-HHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcc
Q 017456          111 AIIGIL-TGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLH  180 (371)
Q Consensus       111 ~~~G~l-~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~  180 (371)
                      +.+|+. ......+|.++++++|++..+++..++|++++++++++++|++++.++.|.++...|++.....
T Consensus       212 l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~  282 (293)
T PRK10532        212 LAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLT  282 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhc
Confidence            345544 3455779999999999999999999999999999999999999999999999988887776544

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=97.78  E-value=0.00036  Score=67.82  Aligned_cols=75  Identities=19%  Similarity=0.388  Sum_probs=67.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhccC-CCChhHHHHHHHHhHHHHHHHHHHHhccccchhHH----HHHHHHHHHHHHHhc
Q 017456          105 PVFFASAIIGILTGLDNYLYAYGVA-RLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSL----NAVFLLTLGAVVLGL  179 (371)
Q Consensus       105 ~~~~~~~~~G~l~~~~n~Ly~~gl~-ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i----~~vvLl~~Ga~ll~~  179 (371)
                      +.....+..|++.+..+.+|..|.+ ++++++++++.+..|+.+++++++++||+.+++++    .|.++...|+.+++.
T Consensus       209 ~~~~~~~~~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~  288 (290)
T TIGR00776       209 YAILLNILPGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI  288 (290)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence            4455666699999999999999999 99999999999999999999999999999999999    999998888877764

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.72  E-value=0.019  Score=57.49  Aligned_cols=111  Identities=12%  Similarity=0.186  Sum_probs=87.8

Q ss_pred             CChhHHHHHHHHHHHHHHHHHHHHhccCCCChhHH-HHHHHHhHHHHHHHHHHHhccc-------cchhHHHHHHHHHHH
Q 017456          102 MRPPVFFASAIIGILTGLDNYLYAYGVARLPVSTS-SLIIASQLAFTAAFAFLLVKQK-------LTSYSLNAVFLLTLG  173 (371)
Q Consensus       102 ~~~~~~~~~~~~G~l~~~~n~Ly~~gl~ylpvst~-sli~ssql~Ftalfs~l~~kek-------~t~~~i~~vvLl~~G  173 (371)
                      .+++.+..+++.|++.+..|..+..+.+|+-+|.. .+-.-+|++++.++..++++|=       -...-+.|+++..+|
T Consensus        68 ~~~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliG  147 (345)
T PRK13499         68 FSGSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIG  147 (345)
T ss_pred             cCHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHH
Confidence            34688889999999999999999999999998876 5666789999999999998752       224467888999999


Q ss_pred             HHHHhc----ccCCCCCCCcchhhhHHHHHHHHHHHHHHHHHH
Q 017456          174 AVVLGL----HTNGDRPDNESARQYLVGFLMTIGAAVLYGFVL  212 (371)
Q Consensus       174 a~ll~~----~~~s~~~~~~s~~~~~~G~~l~l~Aa~~~alyl  212 (371)
                      +++.+.    .+..++.++.++++..-|++.++.+++.|++|-
T Consensus       148 i~l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~  190 (345)
T PRK13499        148 VAIVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFS  190 (345)
T ss_pred             HHHHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHH
Confidence            988876    433221111234556789999999999999988

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=97.67  E-value=0.00014  Score=69.94  Aligned_cols=72  Identities=21%  Similarity=0.390  Sum_probs=62.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHH
Q 017456          106 VFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVL  177 (371)
Q Consensus       106 ~~~~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll  177 (371)
                      .+......++..+..+.+|.++++++|++..+.+.+++|+++.++++++++|++++.++.|.++..+|+.++
T Consensus       210 ~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l~  281 (281)
T TIGR03340       210 ILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVVL  281 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHhC
Confidence            333444555666778889999999999999999999999999999999999999999999999999997653

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=97.58  E-value=0.0018  Score=62.67  Aligned_cols=75  Identities=12%  Similarity=0.127  Sum_probs=63.4

Q ss_pred             hHHHHHHHHHHH-HHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhc
Q 017456          105 PVFFASAIIGIL-TGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGL  179 (371)
Q Consensus       105 ~~~~~~~~~G~l-~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~  179 (371)
                      +.+...+..|+. .+....+|.++++++|++..+++..++|++++++++++++|++|+.++.|.++...|+.++..
T Consensus       210 ~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~  285 (292)
T PRK11272        210 SGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTL  285 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHH
Confidence            334444444543 456688999999999999999999999999999999999999999999999999999877754

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.56  E-value=0.00057  Score=56.88  Aligned_cols=63  Identities=24%  Similarity=0.353  Sum_probs=57.3

Q ss_pred             HHHHHHHHhccCCCChhHH-HHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcc
Q 017456          118 GLDNYLYAYGVARLPVSTS-SLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLH  180 (371)
Q Consensus       118 ~~~n~Ly~~gl~ylpvst~-sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~  180 (371)
                      .....+.+.+++++|++++ ++-.-...+-+++.++++++||+++.++.++.+...|++.+-+.
T Consensus        41 ~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~  104 (106)
T COG2076          41 GLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG  104 (106)
T ss_pred             HHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence            6677888889999999987 99999999999999999999999999999999999998877543

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.56  E-value=0.00063  Score=58.01  Aligned_cols=70  Identities=17%  Similarity=0.338  Sum_probs=60.9

Q ss_pred             HHHHHHHHHHHHHhccCCCChhHH-HHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccC
Q 017456          113 IGILTGLDNYLYAYGVARLPVSTS-SLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTN  182 (371)
Q Consensus       113 ~G~l~~~~n~Ly~~gl~ylpvst~-sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~  182 (371)
                      .-+.++...++++.+++++|++.+ ++......+.+++.++++++|++|+.++.++.+..+|++++-..+.
T Consensus        36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~~  106 (120)
T PRK10452         36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGTR  106 (120)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCCC
Confidence            344557888889999999999987 7777899999999999999999999999999999999988865443

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=97.51  E-value=0.0018  Score=62.77  Aligned_cols=71  Identities=13%  Similarity=0.108  Sum_probs=62.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHh
Q 017456          108 FASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLG  178 (371)
Q Consensus       108 ~~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~  178 (371)
                      ......|+..+.-..+|.++++++|++..+++...+|+++.++++++++|++++.++.|.++..+|+.++.
T Consensus       214 ~~~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~  284 (296)
T PRK15430        214 LLLIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFV  284 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence            44555566666778999999999999999999999999999999999999999999999999888877665

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.51  E-value=0.00083  Score=56.33  Aligned_cols=63  Identities=21%  Similarity=0.165  Sum_probs=56.7

Q ss_pred             HHHHHHHHHHHhccCCCChhHH-HHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHH
Q 017456          115 ILTGLDNYLYAYGVARLPVSTS-SLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVL  177 (371)
Q Consensus       115 ~l~~~~n~Ly~~gl~ylpvst~-sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll  177 (371)
                      +.++...++.+.+++++|++++ ++-.-...+.+++.+++++||++|+.|+.++.+...|++++
T Consensus        43 ~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         43 AAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            3447777888889999999987 88888999999999999999999999999999999998776

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.51  E-value=0.00092  Score=55.70  Aligned_cols=62  Identities=19%  Similarity=0.214  Sum_probs=56.3

Q ss_pred             HHHHHHHHHhccCCCChhHH-HHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHh
Q 017456          117 TGLDNYLYAYGVARLPVSTS-SLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLG  178 (371)
Q Consensus       117 ~~~~n~Ly~~gl~ylpvst~-sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~  178 (371)
                      ++...++.+.+++++|++++ ++-.-...+.+++.+++++||++|+.++.++.+..+|++.+-
T Consensus        39 ~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~  101 (105)
T PRK11431         39 MIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence            37777788889999999986 888889999999999999999999999999999999988774

>COG2510 Predicted membrane protein [Function unknown]

Probab=97.51  E-value=0.0015  Score=56.09  Aligned_cols=129  Identities=14%  Similarity=0.238  Sum_probs=76.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHccchhhhhhhhhhhccccchhH--H
Q 017456          198 FLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKEARAYTLGEGKYY--A  275 (371)
Q Consensus       198 ~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~vg~~~~g~~~~l~~e~~~f~~g~~~y~--~  275 (371)
                      .+.++.+|.++|+--.......|.+ + ..+.     .+.-.++...++..-.+..|+|+ .+.|.    ..+...+  +
T Consensus         5 ~~~ALLsA~fa~L~~iF~KIGl~~v-d-p~~A-----t~IRtiVi~~~l~~v~~~~g~~~-~~~~~----~~k~~lflil   72 (140)
T COG2510           5 IIYALLSALFAGLTPIFAKIGLEGV-D-PDFA-----TTIRTIVILIFLLIVLLVTGNWQ-AGGEI----GPKSWLFLIL   72 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcccc-C-ccHH-----HHHHHHHHHHHHHHHHHhcCcee-ccccc----CcceehhhhH
Confidence            3567778888887444432222211 1 1111     11235556666666677888875 33221    1111112  2


Q ss_pred             HHHHHHHHHHHHHHh-hhhhhhhchhhHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHH
Q 017456          276 VVVASALIWQCFFLG-AIGVIYCGSSLLSAIIIAVLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFAS  343 (371)
Q Consensus       276 ~lv~~av~~q~~~~g-~~Glv~~~ssl~~~vv~t~~lPvt~ilavl~fge~~t~~k~ig~~Lvl~G~~~  343 (371)
                      --+.+.++|++.+.. ..|-...+..+-+     ....++.++++++++|++|..+++|++++..|...
T Consensus        73 SGla~glswl~Yf~ALk~G~as~VvPldk-----~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gail  136 (140)
T COG2510          73 SGLAGGLSWLLYFRALKKGKASRVVPLDK-----TSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAIL  136 (140)
T ss_pred             HHHHHHHHHHHHHHHHhcCCcceEEEccc-----ccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeee
Confidence            245777999998866 4555444444322     33234669999999999999999999999998754

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.49  E-value=0.0012  Score=55.36  Aligned_cols=64  Identities=16%  Similarity=0.269  Sum_probs=56.7

Q ss_pred             HHHHHHHHHhccCCCChhHH-HHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcc
Q 017456          117 TGLDNYLYAYGVARLPVSTS-SLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLH  180 (371)
Q Consensus       117 ~~~~n~Ly~~gl~ylpvst~-sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~  180 (371)
                      ++...++++.+++.+|++++ ++-.....+.+++.++++++|++|+.++.++.+..+|++++-..
T Consensus        40 ~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~  104 (110)
T PRK09541         40 YCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL  104 (110)
T ss_pred             HHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            36677778889999999987 66677899999999999999999999999999999999888644

>TIGR00688 rarD rarD protein

Probab=97.36  E-value=0.011  Score=55.94  Aligned_cols=137  Identities=15%  Similarity=0.214  Sum_probs=78.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHccchhhhhhhhhhhccccch--h
Q 017456          196 VGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKEARAYTLGEGK--Y  273 (371)
Q Consensus       196 ~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~vg~~~~g~~~~l~~e~~~f~~g~~~--y  273 (371)
                      .|.++.+.|++.||...+..+.    . ..   ....++.++-++++++.+++-....++.+...+..+...+.+..  .
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~----~-~~---~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL----L-KP---LPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSL   73 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH----h-cc---CCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHH
Confidence            3888999999999997666543    2 11   23468888888888877665544444332211100100011100  0


Q ss_pred             HHHHHHHHHHHHHHHHhhhhhhhhchhhHHHHHHHHHHHH-HHHHHHHHhCCCCchhHHHHHHHHHHHHHHHH
Q 017456          274 YAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPV-TEILAVIFYKEKFQAEKGVSLALSLWGFASYF  345 (371)
Q Consensus       274 ~~~lv~~av~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPv-t~ilavl~fge~~t~~k~ig~~Lvl~G~~~y~  345 (371)
                      ...-+.....|.....++.-    ++...++++ ...-|+ +.++++++++|+++..+++|+++.+.|+..-.
T Consensus        74 ~~~g~~~~~~~~~~~~a~~~----~~~~~a~~l-~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~  141 (256)
T TIGR00688        74 LLCGLLIGFNWWLFIWAVNN----GSSLEVSLG-YLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI  141 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHc----chHHHHHHH-HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence            11111122333333333221    111123333 344587 66999999999999999999999999988654

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=97.33  E-value=0.0065  Score=58.96  Aligned_cols=79  Identities=13%  Similarity=0.078  Sum_probs=64.9

Q ss_pred             ChhHHHHHHHHH-HHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhccc
Q 017456          103 RPPVFFASAIIG-ILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHT  181 (371)
Q Consensus       103 ~~~~~~~~~~~G-~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~  181 (371)
                      ++..+...+.+| +-.+....+|.+++++++++..+.+...+|++++++++++++|++++.++.|.++..+|+.+...+.
T Consensus       210 ~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~  289 (299)
T PRK11453        210 DMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGL  289 (299)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcch
Confidence            444444445555 3345668889999999999999999999999999999999999999999999999998887665443

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.31  E-value=0.0019  Score=55.76  Aligned_cols=66  Identities=17%  Similarity=0.174  Sum_probs=57.1

Q ss_pred             HHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHH--HhccccchhHHHHHHHHHHHHHHHhcc
Q 017456          115 ILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFL--LVKQKLTSYSLNAVFLLTLGAVVLGLH  180 (371)
Q Consensus       115 ~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l--~~kek~t~~~i~~vvLl~~Ga~ll~~~  180 (371)
                      +.+++..++|.++++..|++.+.-+.+...+++++.++.  +++|++|+.++.|+++..+|+.++..+
T Consensus        56 ~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~  123 (129)
T PRK02971         56 AGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP  123 (129)
T ss_pred             HHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence            345667889999999999999988888888888888885  899999999999999999998887643

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=97.29  E-value=0.0024  Score=52.32  Aligned_cols=36  Identities=22%  Similarity=0.266  Sum_probs=31.5

Q ss_pred             HHH-HHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHh
Q 017456          311 LPV-TEILAVIFYKEKFQAEKGVSLALSLWGFASYFY  346 (371)
Q Consensus       311 lPv-t~ilavl~fge~~t~~k~ig~~Lvl~G~~~y~y  346 (371)
                      .|+ +.+++++++||+++..+++|+++++.|.....|
T Consensus        90 ~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~~  126 (126)
T PF00892_consen   90 SPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIST  126 (126)
T ss_pred             HHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHC
Confidence            376 559999999999999999999999999887654

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=97.17  E-value=0.0024  Score=61.86  Aligned_cols=60  Identities=10%  Similarity=0.055  Sum_probs=54.8

Q ss_pred             HHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHh
Q 017456          119 LDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLG  178 (371)
Q Consensus       119 ~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~  178 (371)
                      .-|.++.+++++++++++++....+|++++++++++++|++|..++.|.++...|+.+..
T Consensus       233 ~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~  292 (302)
T TIGR00817       233 FYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYS  292 (302)
T ss_pred             HHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHH
Confidence            345777779999999999999999999999999999999999999999999999987665

specificities overlap.

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=96.92  E-value=0.0022  Score=62.87  Aligned_cols=68  Identities=18%  Similarity=0.200  Sum_probs=58.0

Q ss_pred             HHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccCCCC
Q 017456          118 GLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDR  185 (371)
Q Consensus       118 ~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~s~~  185 (371)
                      ++.+..-.-++.+-|.+.-+-+.+++.+++++++..++|||++..-.+|.+++.+|.+++..+...++
T Consensus        75 ~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~  142 (335)
T KOG2922|consen   75 IVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQ  142 (335)
T ss_pred             HHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCccc
Confidence            33433333488899999999999999999999999999999999999999999999999887765443

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=96.85  E-value=0.034  Score=46.22  Aligned_cols=41  Identities=22%  Similarity=0.510  Sum_probs=36.2

Q ss_pred             HHH-HHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHhccccc
Q 017456          311 LPV-TEILAVIFYKEKFQAEKGVSLALSLWGFASYFYGEIKN  351 (371)
Q Consensus       311 lPv-t~ilavl~fge~~t~~k~ig~~Lvl~G~~~y~y~~~~~  351 (371)
                      -|+ +.+++.++|+|+++..+++|.++++.|++.-.+++...
T Consensus        70 ~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~~~  111 (113)
T PF13536_consen   70 SPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDLTG  111 (113)
T ss_pred             HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhccc
Confidence            476 55999999999999999999999999999988877544

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=96.70  E-value=0.0074  Score=60.25  Aligned_cols=67  Identities=13%  Similarity=0.170  Sum_probs=56.9

Q ss_pred             HHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHh
Q 017456          112 IIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLG  178 (371)
Q Consensus       112 ~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~  178 (371)
                      ..|+...+.|..-.++++++++.++++....+++++.++++++++|++|+.++.|.++...|+.+..
T Consensus       281 ~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs  347 (350)
T PTZ00343        281 FSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYS  347 (350)
T ss_pred             HHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHh
Confidence            3445555555555569999999999999999999999999999999999999999999999976643

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=96.53  E-value=0.017  Score=54.17  Aligned_cols=78  Identities=22%  Similarity=0.348  Sum_probs=66.4

Q ss_pred             ChhHHHHHHHHHHHHH-HHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcc
Q 017456          103 RPPVFFASAIIGILTG-LDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLH  180 (371)
Q Consensus       103 ~~~~~~~~~~~G~l~~-~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~  180 (371)
                      +.+.+......|+... ....+|.++++..|++..+.+..+.|++.+++++++++|+++..++.|.++...|..+....
T Consensus       210 ~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         210 LSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            3455667777776666 47888888999999999999999999999999999999999999999998888887766533

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=96.53  E-value=0.065  Score=52.07  Aligned_cols=132  Identities=16%  Similarity=0.275  Sum_probs=82.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHccchhhhhhhhhhhccccchhH
Q 017456          195 LVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKEARAYTLGEGKYY  274 (371)
Q Consensus       195 ~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~vg~~~~g~~~~l~~e~~~f~~g~~~y~  274 (371)
                      .-|+++++.|...||..=.+    +| ..++-+   ..|+..+--+-+.++.++-+...+.|+++..   ..++.+ ...
T Consensus         6 ~~Gil~~l~Ay~lwG~lp~y----~k-ll~~~~---~~eIlahRviwS~~~~l~ll~~~r~~~~~~~---~~~~p~-~~~   73 (293)
T COG2962           6 RKGILLALLAYLLWGLLPLY----FK-LLEPLP---ATEILAHRVIWSFPFMLALLFLLRQWRELKQ---LLKQPK-TLL   73 (293)
T ss_pred             cchhHHHHHHHHHHHHHHHH----HH-HHccCC---HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH---HHhCcH-HHH
Confidence            46999999999999994444    23 333323   3477666666666666666666676665432   122222 112


Q ss_pred             HHHHHH---HHHHHHHHHhh-hhhhhhchhhHHHHHHHHHHHHHH-HHHHHHhCCCCchhHHHHHHHHHHHHHHH
Q 017456          275 AVVVAS---ALIWQCFFLGA-IGVIYCGSSLLSAIIIAVLLPVTE-ILAVIFYKEKFQAEKGVSLALSLWGFASY  344 (371)
Q Consensus       275 ~~lv~~---av~~q~~~~g~-~Glv~~~ssl~~~vv~t~~lPvt~-ilavl~fge~~t~~k~ig~~Lvl~G~~~y  344 (371)
                      ...+.+   ..+|..+.-.+ .|++-.+| +=+     +..|++. +++.++++|+++..|+++.+++..|+..-
T Consensus        74 ~~~l~a~li~~nW~lfiWAvn~g~~leaS-LGY-----~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~  142 (293)
T COG2962          74 MLALTALLIGLNWWLFIWAVNNGHVLEAS-LGY-----FINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQ  142 (293)
T ss_pred             HHHHHHHHHHHHHHHhheecCCCchhHHH-hHH-----HHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH
Confidence            222222   25666666442 33432222 112     4459855 99999999999999999999999998765

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.38  E-value=0.011  Score=47.88  Aligned_cols=54  Identities=15%  Similarity=0.216  Sum_probs=34.1

Q ss_pred             HHHHHHHHHHhccCCCChhHH-HHHHHHhHHHHHHHHHHHhccccchhHHHHHHH
Q 017456          116 LTGLDNYLYAYGVARLPVSTS-SLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFL  169 (371)
Q Consensus       116 l~~~~n~Ly~~gl~ylpvst~-sli~ssql~Ftalfs~l~~kek~t~~~i~~vvL  169 (371)
                      .++...++++.+++++|.+++ .+......+.+.+.+.++++|++|+.|+.++.+
T Consensus        38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~l   92 (93)
T PF00893_consen   38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGL   92 (93)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHH
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheee
Confidence            457778899999999999988 777789999999999999999999999999875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PRK13499 rhamnose-proton symporter; Provisional

Probab=96.06  E-value=0.15  Score=51.07  Aligned_cols=76  Identities=17%  Similarity=0.232  Sum_probs=63.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhccCCCChhHHHH---HH-HHhHHHHHHHHHHHhccccc------hhHHHHHHHHHHH
Q 017456          104 PPVFFASAIIGILTGLDNYLYAYGVARLPVSTSSL---II-ASQLAFTAAFAFLLVKQKLT------SYSLNAVFLLTLG  173 (371)
Q Consensus       104 ~~~~~~~~~~G~l~~~~n~Ly~~gl~ylpvst~sl---i~-ssql~Ftalfs~l~~kek~t------~~~i~~vvLl~~G  173 (371)
                      .|..+.+++-|++.+.+|+.|..|-+.++++.+.+   ++ |+..++..+-+. ++||+=+      +..+.++++..+|
T Consensus       257 ~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g  335 (345)
T PRK13499        257 ITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLGCVVIILA  335 (345)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHHHHHHHHH
Confidence            47888999999999999999999998887765555   66 888899999888 5999877      6667888888888


Q ss_pred             HHHHhcc
Q 017456          174 AVVLGLH  180 (371)
Q Consensus       174 a~ll~~~  180 (371)
                      +++++.+
T Consensus       336 ~~lig~~  342 (345)
T PRK13499        336 ANIVGLG  342 (345)
T ss_pred             HHHHhhc
Confidence            8887755

>TIGR00803 nst UDP-galactose transporter

Probab=95.77  E-value=0.061  Score=49.79  Aligned_cols=64  Identities=16%  Similarity=0.119  Sum_probs=51.9

Q ss_pred             HHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhccc
Q 017456          117 TGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHT  181 (371)
Q Consensus       117 ~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~  181 (371)
                      +..+|-+...++.+.++...... +.|.+.++++...+++.+++..|+.++.++..|+.....++
T Consensus         9 ~~~s~~l~~v~l~~~~~~~~~~~-~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~   72 (222)
T TIGR00803         9 IFKQNNLVLIALGNLLAAGKQVT-QLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQ   72 (222)
T ss_pred             HHHhcchHHHHHhcccccceeee-hHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCC
Confidence            34444444458888888888888 99999999999999999999999999988888876655443

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=95.69  E-value=0.05  Score=52.02  Aligned_cols=74  Identities=16%  Similarity=0.206  Sum_probs=64.0

Q ss_pred             CChhHHHHHHHHHHHHHHH-HHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHH
Q 017456          102 MRPPVFFASAIIGILTGLD-NYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAV  175 (371)
Q Consensus       102 ~~~~~~~~~~~~G~l~~~~-n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~  175 (371)
                      +++.++.++...|++...- ..+=..+++.+|..+++++.+..|++.++-++++++|..|..|+.+++....+++
T Consensus       204 ~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsa  278 (292)
T COG5006         204 FSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASA  278 (292)
T ss_pred             cChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence            6678888888888776655 5566678999999999999999999999999999999999999999988666654

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=95.48  E-value=0.27  Score=48.98  Aligned_cols=170  Identities=19%  Similarity=0.269  Sum_probs=106.3

Q ss_pred             HHHHHHHHhhhchHHHHHHHH--HhcCCcchhHHHHHhhhchhhHHHHHHHhhhhcCCCCCCCCCCCCCCCCCCCCCCCc
Q 017456           21 ILNIILLAIGNCAGPLIMRLY--FLHGGKRIWFSSWLETAGCPVILIPITVSYLQRRRSGTTTDHESSTSSQPSNNDDNK   98 (371)
Q Consensus        21 ~~~~~~~~~g~~~~~Ll~r~y--~~~~g~~~w~~t~vq~agfp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (371)
                      ++-+++-.+|..++   +-+|  |.+--+=.|=+.|+--.=|.-++.|....+..-+.-     .        +...   
T Consensus         6 i~Gii~h~iGg~~~---~sfy~P~kkvk~WsWEs~Wlv~gi~swli~P~~~a~l~ip~~-----~--------~i~~---   66 (344)
T PF06379_consen    6 ILGIIFHAIGGFAS---GSFYVPFKKVKGWSWESYWLVQGIFSWLIVPWLWALLAIPDF-----F--------SIYS---   66 (344)
T ss_pred             HHHHHHHHHHHHHh---hhhccchhhcCCccHHHHHHHHHHHHHHHHHHHHHHHhCCcH-----H--------HHHH---
Confidence            34444555552222   3344  455555578888887777888888877765433211     0        0000   


Q ss_pred             cccCChhHHHHHHHHHHHHHHHHHHHHhccCCCChhHH-HHHHHHhHHHHHHHHHHHh-------ccccchhHHHHHHHH
Q 017456           99 LILMRPPVFFASAIIGILTGLDNYLYAYGVARLPVSTS-SLIIASQLAFTAAFAFLLV-------KQKLTSYSLNAVFLL  170 (371)
Q Consensus        99 ~~~~~~~~~~~~~~~G~l~~~~n~Ly~~gl~ylpvst~-sli~ssql~Ftalfs~l~~-------kek~t~~~i~~vvLl  170 (371)
                        ..+...+...++.|++.+..++.|-.+.+|+-+|.- ++..-+..++-.+.--++.       .++-....+.|+++.
T Consensus        67 --~~~~~~l~~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~  144 (344)
T PF06379_consen   67 --ATPASTLFWTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVC  144 (344)
T ss_pred             --hCChhHHHHHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHH
Confidence              122256778899999999999999999999877543 4444444444444433332       234456789999999


Q ss_pred             HHHHHHHhccc---CCCCCCCcchhhhHHHHHHHHHHHHHHHHH
Q 017456          171 TLGAVVLGLHT---NGDRPDNESARQYLVGFLMTIGAAVLYGFV  211 (371)
Q Consensus       171 ~~Ga~ll~~~~---~s~~~~~~s~~~~~~G~~l~l~Aa~~~aly  211 (371)
                      .+|+++.+...   +.+..++.++.+.--|.++++.+++++|.+
T Consensus       145 LiGIai~g~AG~~Ke~~~~~~~~efn~~kGl~iAv~sGv~Sa~f  188 (344)
T PF06379_consen  145 LIGIAICGKAGSMKEKELGEEAKEFNFKKGLIIAVLSGVMSACF  188 (344)
T ss_pred             HHHHHHHhHHHHhhhhhhccchhhhhhhhhHHHHHHHHHHHHHH
Confidence            99998886322   112222334455678999999999999883

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=95.16  E-value=0.46  Score=46.21  Aligned_cols=44  Identities=18%  Similarity=0.342  Sum_probs=38.1

Q ss_pred             HH-HHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHhccccchhhh
Q 017456          312 PV-TEILAVIFYKEKFQAEKGVSLALSLWGFASYFYGEIKNKKKM  355 (371)
Q Consensus       312 Pv-t~ilavl~fge~~t~~k~ig~~Lvl~G~~~y~y~~~~~~~k~  355 (371)
                      |+ +.++++++++++.+..|+++.+++..|++.+.+.+..++++.
T Consensus       101 ~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~  145 (303)
T PF08449_consen  101 PIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSS  145 (303)
T ss_pred             HHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccccccccc
Confidence            55 559999999999999999999999999999988876666544

; GO: 0055085 transmembrane transport

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=94.60  E-value=0.83  Score=38.97  Aligned_cols=36  Identities=14%  Similarity=0.229  Sum_probs=31.1

Q ss_pred             HHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHH
Q 017456          309 VLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASY  344 (371)
Q Consensus       309 ~~lPvt~ilavl~fge~~t~~k~ig~~Lvl~G~~~y  344 (371)
                      .....+.+.++++|||++|..|++|+.+++.|+..-
T Consensus        66 iG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l  101 (120)
T PRK10452         66 IGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLI  101 (120)
T ss_pred             HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHh
Confidence            343456789999999999999999999999999775

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=94.01  E-value=0.91  Score=37.92  Aligned_cols=68  Identities=21%  Similarity=0.218  Sum_probs=44.7

Q ss_pred             HHHHHHHHHHHHHHHHhhhhhhhhchhhHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHH
Q 017456          274 YAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASY  344 (371)
Q Consensus       274 ~~~lv~~av~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPvt~ilavl~fge~~t~~k~ig~~Lvl~G~~~y  344 (371)
                      .+.++.-.+++.+....+..+.-   ++-+.+-+-.....+.+.++++|+|+++..|++++.+++.|+..-
T Consensus        34 il~~v~~~~sf~~Ls~alk~ipv---gvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~L  101 (106)
T COG2076          34 ILTIVGYGLSFYLLSLALKTIPL---GVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGL  101 (106)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCch---HHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHh
Confidence            33455555666655555444211   111223333444557799999999999999999999999998764

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=93.50  E-value=0.9  Score=44.04  Aligned_cols=60  Identities=15%  Similarity=0.261  Sum_probs=54.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHH
Q 017456          108 FASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAV  167 (371)
Q Consensus       108 ~~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~v  167 (371)
                      .--+..|++++..|+.|..+.+..-++++=.+.|+.++...+.+.+++|||=+++++.-+
T Consensus       196 ~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~  255 (269)
T PF06800_consen  196 WKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYT  255 (269)
T ss_pred             HHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHH
Confidence            355778999999999999999999999999999999999999999999999998876543

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=93.42  E-value=3.6  Score=35.73  Aligned_cols=123  Identities=11%  Similarity=0.121  Sum_probs=63.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHccchhhhhhhhhhhccccchhHHH-
Q 017456          198 FLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKEARAYTLGEGKYYAV-  276 (371)
Q Consensus       198 ~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~vg~~~~g~~~~l~~e~~~f~~g~~~y~~~-  276 (371)
                      .++++.+++.-++-..+.-+..|+..+      ..+-.++...++++.+.+-.+..++. ..    +....-++.+++- 
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~~~~gs------~~~as~i~~~~G~i~~~i~~~~~~~~-~~----~~~~~~p~w~~lGG   71 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLGKALGS------PLVASFISFGVGFILLLIILLITGRP-SL----ASLSSVPWWAYLGG   71 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCc------cHHHHHHHHHHHHHHHHHHHHHhccc-cc----chhccCChHHhccH
Confidence            456777777777766666555555421      23444556677777777666666542 12    1222222222221 


Q ss_pred             HHHHH-HHHHHHHHhhhhhhhhchhhHHHHHHHHHHHHHH--HHHHHHhC--------CCCchhHHHHHHHHHHHHH
Q 017456          277 VVASA-LIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTE--ILAVIFYK--------EKFQAEKGVSLALSLWGFA  342 (371)
Q Consensus       277 lv~~a-v~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPvt~--ilavl~fg--------e~~t~~k~ig~~Lvl~G~~  342 (371)
                      +++.. +.-....+...           +...+..+.++.  +.+.++.|        ++++..|++|.++.+.|..
T Consensus        72 ~lG~~~V~~~~~~vp~l-----------G~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~  137 (138)
T PF04657_consen   72 LLGVFFVLSNIILVPRL-----------GAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVI  137 (138)
T ss_pred             HHHHHHHHHHHHHhhhh-----------hHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHh
Confidence            11111 11111111111           222233334444  44444433        8899999999999999875

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=93.28  E-value=2.1  Score=42.79  Aligned_cols=69  Identities=13%  Similarity=0.216  Sum_probs=52.4

Q ss_pred             HHHHHHHhhhhhhhhchhhHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHhccccch
Q 017456          283 IWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASYFYGEIKNK  352 (371)
Q Consensus       283 ~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPvt~ilavl~fge~~t~~k~ig~~Lvl~G~~~y~y~~~~~~  352 (371)
                      --++.+..+.++.++..+ ....+....+|.+.+++++++++++++.|++|.++++.|++.-.+.++...
T Consensus        89 Dv~aN~~~v~a~~yTsvt-S~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~  157 (334)
T PF06027_consen   89 DVEANYLVVLAYQYTSVT-SVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSG  157 (334)
T ss_pred             HHHHHHHHHHHhhcccHh-HHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeeccccc
Confidence            335555666666653332 244555566799999999999999999999999999999999888776544

Some of the sequences in this family are annotated as putative membrane proteins.

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=93.01  E-value=0.97  Score=44.42  Aligned_cols=36  Identities=28%  Similarity=0.291  Sum_probs=31.2

Q ss_pred             HHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHh
Q 017456          311 LPVTEILAVIFYKEKFQAEKGVSLALSLWGFASYFY  346 (371)
Q Consensus       311 lPvt~ilavl~fge~~t~~k~ig~~Lvl~G~~~y~y  346 (371)
                      +..+.+++-.++||+++...++|+++++.|......
T Consensus        87 lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~  122 (300)
T PF05653_consen   87 LVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVI  122 (300)
T ss_pred             hhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEE
Confidence            355679999999999999999999999999887643

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=92.50  E-value=2.3  Score=35.62  Aligned_cols=36  Identities=14%  Similarity=0.191  Sum_probs=31.4

Q ss_pred             HHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHH
Q 017456          309 VLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASY  344 (371)
Q Consensus       309 ~~lPvt~ilavl~fge~~t~~k~ig~~Lvl~G~~~y  344 (371)
                      .....+.+.++++|||++|..|++|+.+++.|+..-
T Consensus        66 lG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l  101 (110)
T PRK09541         66 VGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVI  101 (110)
T ss_pred             HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHH
Confidence            343456799999999999999999999999999885

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=92.41  E-value=0.19  Score=42.44  Aligned_cols=60  Identities=17%  Similarity=0.190  Sum_probs=51.7

Q ss_pred             HHHHHHHHHhccCCCChhHHHHH-HHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHH
Q 017456          117 TGLDNYLYAYGVARLPVSTSSLI-IASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVV  176 (371)
Q Consensus       117 ~~~~n~Ly~~gl~ylpvst~sli-~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~l  176 (371)
                      ......+|.+.++..|.|...-+ +++.-+||++.++++-+|..+++.+.|+++...|+.+
T Consensus        51 Nq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L  111 (113)
T PF10639_consen   51 NQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL  111 (113)
T ss_pred             HHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence            33447888889999999988777 5999999999999999999999999999999988754

Many members are annotated as potential transmembrane proteins.

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=92.29  E-value=2.7  Score=35.26  Aligned_cols=64  Identities=16%  Similarity=0.150  Sum_probs=41.2

Q ss_pred             HHHHHHHHHHHHHhhhhhhhhchhhHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHH
Q 017456          277 VVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFAS  343 (371)
Q Consensus       277 lv~~av~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPvt~ilavl~fge~~t~~k~ig~~Lvl~G~~~  343 (371)
                      ++.-++++......+..+.   -++-+.+-+-.....+.+.++++|||++|..|++|+.+++.|+..
T Consensus        42 ~~~~~~sf~~Ls~al~~lp---vgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~  105 (109)
T PRK10650         42 LAAVLAAFSALSQAVKGID---LSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVM  105 (109)
T ss_pred             HHHHHHHHHHHHHHHhhCc---hHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHH
Confidence            4444455555444433221   111223333344455678999999999999999999999999875

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=92.25  E-value=1.2  Score=37.30  Aligned_cols=33  Identities=18%  Similarity=0.220  Sum_probs=29.5

Q ss_pred             HH-HHHHHHHHhCCCCchhHHHHHHHHHHHHHHH
Q 017456          312 PV-TEILAVIFYKEKFQAEKGVSLALSLWGFASY  344 (371)
Q Consensus       312 Pv-t~ilavl~fge~~t~~k~ig~~Lvl~G~~~y  344 (371)
                      |+ +.++++++|||++|..|++|.++++.|+..-
T Consensus        74 ~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i  107 (111)
T PRK15051         74 FVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVIL  107 (111)
T ss_pred             HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHH
Confidence            55 5699999999999999999999999998753

>PRK11431 multidrug efflux system protein; Provisional

Probab=91.51  E-value=3  Score=34.69  Aligned_cols=36  Identities=19%  Similarity=0.201  Sum_probs=31.0

Q ss_pred             HHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHH
Q 017456          309 VLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASY  344 (371)
Q Consensus       309 ~~lPvt~ilavl~fge~~t~~k~ig~~Lvl~G~~~y  344 (371)
                      .....+.+.++++|||++|..|++|+.+++.|+..-
T Consensus        65 iG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l  100 (105)
T PRK11431         65 IGAVGAAITGIVLLGESASPARLLSLALIVAGIIGL  100 (105)
T ss_pred             HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhh
Confidence            443456799999999999999999999999998764

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=90.40  E-value=2.4  Score=36.47  Aligned_cols=32  Identities=19%  Similarity=0.320  Sum_probs=27.0

Q ss_pred             HHHHHHH--HhCCCCchhHHHHHHHHHHHHHHHH
Q 017456          314 TEILAVI--FYKEKFQAEKGVSLALSLWGFASYF  345 (371)
Q Consensus       314 t~ilavl--~fge~~t~~k~ig~~Lvl~G~~~y~  345 (371)
                      +.++++.  +|||++|..|++|+++++.|+....
T Consensus        88 v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~  121 (129)
T PRK02971         88 VYLAAMLLPWFNETFSLKKTLGVACIMLGVWLIN  121 (129)
T ss_pred             HHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            4466664  8999999999999999999988854

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=86.49  E-value=1.2  Score=42.47  Aligned_cols=48  Identities=13%  Similarity=0.216  Sum_probs=40.0

Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHhccccch
Q 017456          305 IIIAVLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASYFYGEIKNK  352 (371)
Q Consensus       305 vv~t~~lPvt~ilavl~fge~~t~~k~ig~~Lvl~G~~~y~y~~~~~~  352 (371)
                      +..-..++.++++++++++.+++..|++++.+...|....-++...++
T Consensus        48 vl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~~   95 (244)
T PF04142_consen   48 VLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQSS   95 (244)
T ss_pred             HHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcccc
Confidence            333445577889999999999999999999999999999877766654

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=85.46  E-value=2.2  Score=41.01  Aligned_cols=51  Identities=24%  Similarity=0.180  Sum_probs=30.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHccc
Q 017456          197 GFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKD  255 (371)
Q Consensus       197 G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~vg~~~~g~  255 (371)
                      |.+.++.|+++||-...=    .||.-..+    -+-.|.++|....+...+-.+..+.
T Consensus         1 G~~a~~va~~~fGs~~vP----vK~~~~gD----g~~fQw~~~~~i~~~g~~v~~~~~~   51 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVP----VKKFDTGD----GFFFQWVMCSGIFLVGLVVNLILGF   51 (254)
T ss_pred             CchhHHHHHHHhccccee----eEeccCCC----cHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            677888899999872222    25443223    3567877776555555555555554

The region concerned is approximately 280 residues long.

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=84.01  E-value=0.062  Score=51.20  Aligned_cols=116  Identities=16%  Similarity=0.220  Sum_probs=85.1

Q ss_pred             CChhHHHHHHHHHHHHHHHHHHHHhccCCCChhHHHHH-HHHhHHHHHHHHHHHhccccchhHH----HHHHHHHHHHHH
Q 017456          102 MRPPVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLI-IASQLAFTAAFAFLLVKQKLTSYSL----NAVFLLTLGAVV  176 (371)
Q Consensus       102 ~~~~~~~~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli-~ssql~Ftalfs~l~~kek~t~~~i----~~vvLl~~Ga~l  176 (371)
                      +|.+.+..++..|++++..+..=.-+.+++.+|-+.=+ .-+|++-+.+|+.+.++|=-+..++    .++++..+|+.+
T Consensus        54 ~T~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~l  133 (288)
T COG4975          54 LTLTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYL  133 (288)
T ss_pred             cchhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheE
Confidence            56688999999999999997777678877766655332 3679999999999999998888775    355666666555


Q ss_pred             HhcccCCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 017456          177 LGLHTNGDRPDNESARQYLVGFLMTIGAAVLYGFVLPLMELT  218 (371)
Q Consensus       177 l~~~~~s~~~~~~s~~~~~~G~~l~l~Aa~~~alyl~l~e~~  218 (371)
                      -...+..++ ++++.+++--|+...+.+++.|-.|-.+.|..
T Consensus       134 Ts~~~~~nk-~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f  174 (288)
T COG4975         134 TSKQDRNNK-EEENPSNLKKGIVILLISTLGYVGYVVLFQLF  174 (288)
T ss_pred             eeeeccccc-cccChHhhhhheeeeeeeccceeeeEeeeccc
Confidence            454443222 22344567789998899999999988885443

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=82.20  E-value=4.7  Score=38.61  Aligned_cols=56  Identities=18%  Similarity=0.210  Sum_probs=45.2

Q ss_pred             HHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHH
Q 017456          119 LDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGA  174 (371)
Q Consensus       119 ~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga  174 (371)
                      +.+++-..-..+-.+-+-|++.++.=.||.+.|.++++.+++.+||+|-++.+.+.
T Consensus       253 LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL  308 (337)
T KOG1580|consen  253 LGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSAL  308 (337)
T ss_pred             hhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHh
Confidence            33333333666666667788999999999999999999999999999999887664

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=81.49  E-value=12  Score=38.11  Aligned_cols=71  Identities=14%  Similarity=0.228  Sum_probs=61.2

Q ss_pred             HHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhccc
Q 017456          109 ASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHT  181 (371)
Q Consensus       109 ~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~  181 (371)
                      +..++|-  .+.+++|.+|.-.+++-+.++=.+.|.+..+++-.++-++++|+..++|.+..++|-+++...+
T Consensus       322 ~~~ligt--vvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~  392 (416)
T KOG2765|consen  322 FNNLIGT--VVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISS  392 (416)
T ss_pred             HhhHHHH--HHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheeccc
Confidence            3335555  7789999999999999999999999999999999999999999999999999888876665444

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=81.38  E-value=35  Score=29.55  Aligned_cols=106  Identities=20%  Similarity=0.203  Sum_probs=67.4

Q ss_pred             CCcchhHHHHHhhhchhhHHHHHHHhhhhcCCCCCCCCCCCCCCCCCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHH
Q 017456           45 GGKRIWFSSWLETAGCPVILIPITVSYLQRRRSGTTTDHESSTSSQPSNNDDNKLILMRPPVFFASAIIGILTGLDNYLY  124 (371)
Q Consensus        45 ~g~~~w~~t~vq~agfp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~n~Ly  124 (371)
                      -|+-.+-+.+.+..|+..+++.+++..  +++.    .+            -+   .. |+-....-.+|..+..-+   
T Consensus        27 ~gs~~~as~i~~~~G~i~~~i~~~~~~--~~~~----~~------------~~---~~-p~w~~lGG~lG~~~V~~~---   81 (138)
T PF04657_consen   27 LGSPLVASFISFGVGFILLLIILLITG--RPSL----AS------------LS---SV-PWWAYLGGLLGVFFVLSN---   81 (138)
T ss_pred             hCccHHHHHHHHHHHHHHHHHHHHHhc--cccc----ch------------hc---cC-ChHHhccHHHHHHHHHHH---
Confidence            344455555667888888776555531  1111    00            00   12 233344555665443332   


Q ss_pred             HhccCCCChhHH-HHHHHHhHHHHHHHHHH----HhccccchhHHHHHHHHHHHHH
Q 017456          125 AYGVARLPVSTS-SLIIASQLAFTAAFAFL----LVKQKLTSYSLNAVFLLTLGAV  175 (371)
Q Consensus       125 ~~gl~ylpvst~-sli~ssql~Ftalfs~l----~~kek~t~~~i~~vvLl~~Ga~  175 (371)
                      .+..+.+.++.. .+...-|++..+++..+    .-|+|++++++.|++++.+|+.
T Consensus        82 ~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~  137 (138)
T PF04657_consen   82 IILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVI  137 (138)
T ss_pred             HHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHh
Confidence            345567777776 45566799999999987    6799999999999999999975

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	371
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.16
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.11
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	96.59
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	94.5

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.16  E-value=9e-06  Score=66.83  Aligned_cols=68  Identities=16%  Similarity=0.243  Sum_probs=60.8

Q ss_pred             HHHHHHHHHHHHhccCCCChhHHHHH-HHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhccc
Q 017456          114 GILTGLDNYLYAYGVARLPVSTSSLI-IASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHT  181 (371)
Q Consensus       114 G~l~~~~n~Ly~~gl~ylpvst~sli-~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~  181 (371)
                      .+.++...+++.++++++|++.+.-+ ..+.++++++.+++++|||+|+.|+.|+++..+|++++...+
T Consensus        37 ~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            34557778889999999999999777 899999999999999999999999999999999998887543

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.11  E-value=5.8e-06  Score=70.77  Aligned_cols=67  Identities=16%  Similarity=0.269  Sum_probs=49.0

Q ss_pred             HHHHHHHHHHHhccCCCChhHHHHH-HHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhccc
Q 017456          115 ILTGLDNYLYAYGVARLPVSTSSLI-IASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHT  181 (371)
Q Consensus       115 ~l~~~~n~Ly~~gl~ylpvst~sli-~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~  181 (371)
                      +.+++..++|.++++++|++.+..+ ....|++++++++++++|++|+.++.|+++..+|++++...+
T Consensus        38 ~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           38 ICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            4456778899999999999988777 899999999999999999999999999999999999887644

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=96.59  E-value=0.0073  Score=51.37  Aligned_cols=69  Identities=10%  Similarity=0.002  Sum_probs=38.0

Q ss_pred             HHHHHHHHHHHHHHHhhhhhhhhchhhHHHHHHHHHHHH-HHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHhc
Q 017456          275 AVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPV-TEILAVIFYKEKFQAEKGVSLALSLWGFASYFYG  347 (371)
Q Consensus       275 ~~lv~~av~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPv-t~ilavl~fge~~t~~k~ig~~Lvl~G~~~y~y~  347 (371)
                      +.++..++++.+...++..+-.   |.-+.+.. ..-|+ +.++++++|||+++..|++|+++++.|+......
T Consensus        35 l~i~~~~ls~~l~~~alk~i~~---s~ay~iw~-~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~  104 (137)
T 2i68_A           35 GTIICYCASFWLLAQTLAYIPT---GIAYAIWS-GVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (137)
T ss_dssp             HHHHHHHHHHHHHHHHHC--------CHHHHHH-HHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHhCCh---hHHHHHHH-HHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            3355565665555554333311   21111212 33377 4599999999999999999999999999887654

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=94.50  E-value=0.42  Score=38.54  Aligned_cols=35  Identities=14%  Similarity=0.150  Sum_probs=31.3

Q ss_pred             HH-HHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHh
Q 017456          312 PV-TEILAVIFYKEKFQAEKGVSLALSLWGFASYFY  346 (371)
Q Consensus       312 Pv-t~ilavl~fge~~t~~k~ig~~Lvl~G~~~y~y  346 (371)
                      |+ +.++++++|||++|..|++|.++++.|+.....
T Consensus        68 ~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~  103 (110)
T 3b5d_A           68 IVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINL  103 (110)
T ss_pred             HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            66 569999999999999999999999999887644

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00