Citrus Sinensis ID: 017473

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-
Protein Sequence
MESHMREWYKSQPSDELILCLLKKKRLDPHFSYGPIKDIGHICSLEPWDLATESETDSEDQTCYFFYKPRYTKSNDAHRATNAGSWKVTRKVSQIEARNGLTGTKKSLTFYLRGLPRKEAITEWGMHEYHVKDDPSYEKEFVLCRIFRRRNKKKRGISTTDEGESSEQLVSSPQQSPCDHSISNGNHSEESTHTIPQQQLQYHNSISYPRNLNVQNTFAYPQSITDDSPTQLSPGNHSEGTTHTYPQQLPNHNSISYTGNRIEQNMYLLKYLPNYSPAQQLPCDHFISARNYSEEYVPINQQPQPNDNLISHLGSQIEGFSPTNSLLPQNSNLEWQLPLHHPLEIHNSAENPFRKDVSQLEKSRHTVATIG
Secondary Structure (PSIPRED)
ccccccccccccccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccEEccccccccccccccccccccccccccccccccccccEEEEEEEEEEccccccccccccccEEEEEEccccccccccEEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccHHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccHHHHHHHHHHHHccccccccEEHHHEEcccccccccccHcccccccEEEEEcccccccccccccccccccEEEEccccccEcccccEEEEEEEEEEEEcccccccccccEEEEEEEccccccccccEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHcccccccccccccccccccccccccccccccccccccccccHHHHHHccHcccEEEEEcc
Coil and Loop (DISEMBL)
meshmrewyksqpsdELILCLLKkkrldphfsygpikdighicslepwdlatesetdsedqtcyffykprytksndahratnagswkvtRKVSQIearngltgtkKSLTFYLRGlprkeaitewgmheyhvkddpsyekEFVLCRIFRrrnkkkrgisttdegesseqlvsspqqspcdhsisngnhseesthtipqqqlqyhnsisyprnlnvqntfaypqsitddsptqlspgnhsegtthtypqqlpnhnsisytgNRIEQNMYLLkylpnyspaqqlpcdhfisarnyseeyvpinqqpqpndnlishlgsqiegfsptnsllpqnsnlewqlplhhpleihnsaenpfrkdvSQLEKSRHTVATIG
Flexible Loop (DISEMBL)
meshmrewyksqpsdELILCLLKKKRLDPHFSYGPIKDIGHICSLEPWDLATESETDSEDQTCYFFYkprytksndahratnagswkvtrkvsqiearngltgtkksltfyLRGLPRKEAITEWGMheyhvkddpsyeKEFVLCRifrrrnkkkrgisttdegesseqlvsspqqspCDHSISNGNHSEESTHTIPQQQLQYHNSISYPRNLNVQNTFAYPQSITDDSPTQLSPGNHSEGTTHTYPQQLPNHNSISYTGNRIEQNMYLLKYLPNYSPAQQLPCDHFISARNYSEEYVPINQQPQPNDNLISHLGSQIEGFSPTNSLLPQNSNLEWQLPLHHPLEIHNSAENPFRKDVSQLEKSRHTVATIG
Low Complexity Region (SEG)
MESHMREWYKSQPSDELILCLLKKKRLDPHFSYGPIKDIGHICSLEPWDLATESETDSEDQTCYFFYKPRYTKSNDAHRATNAGSWKVTRKVSQIEARNGLTGTKKSLTFYLRGLPRKEAITEWGMHEYHVKDDPSYEKEFVLCRIFRRRNKKKRGISTTDEGESSEQLVSSPQQSPCDHSISNGNHSEESTHTIPQQQLQYHNSISYPRNLNVQNTFAYPQSITDDSPTQLSPGNHSEGTTHTYPQQLPNHNSISYTGNRIEQNMYLLKYLPNYSPAQQLPCDHFISARNYSEEYVPINQQPQPNDNLISHLGSQIEGFSPTNSLLPQNSNLEWQLPLHHPLEIHNSAENPFRKDVSQLEKSRHTVATIG
Disordered region (IsUnstruct)
***************ELILCLLKKKRLDPHFSYGPIKDIGHICSLEPWDLATE******DQTCYFFYKPRYTKSN*AHRATNAGSWKVTRKVSQIEARNGLTGTKKSLTFYLRGLPRKEAITEWGMHEYHVKDDPSYEKEFVLCRIF****************************************************************LNVQNTF************************************ISYTGNRIEQNMYLLKYLPNYSPAQQLPCDHFISARNYSEEYVP************************************WQL**********************************
Disordered Region (DISOPRED)
**SHMREWYKSQPSDELILCLLKKKRLDPHFSYGPIKDIGHICSLEPWDLATESETDSEDQTCYFFYKPRYTKSNDAHRATNAGSWKVTRKVSQIEARNGLTGTKKSLTFYLRGLPRKEAITEWGMHEYHVKDDPSYEKEFVLCRIFR******************************************************************************************************************************************************************************************WQLPLHH***********************H****I*
Disordered Region (DISEMBL)
************PSDELILCLLKKKRLDPHFSYGPIKDIGHICSLEPWDLA********DQTCYFFYKPRYTKSNDAHRATNAGSWKVTRKVSQIEARNGLTGTKKSLTFYLRGLPRKEAITEWGMHEYHVKDDPSYEKEFVLCRIFRRRN***********************************************QLQYHNSISYPRNLNVQNTFAYPQSITDDSPTQLSPGNHSEGTTHTYPQQLPNHNSISYTGNRIEQNMYLLKYLPNYSPAQQLPCDHFISARNYSEEYVPINQQPQPNDNLISHLGSQIEGFSPTNSLLPQNSNLEWQLPLHHPLEIHNSAENPFRKD***************
Disordered Region (DISPRO)
****MREWYKSQPSDELILCLLKKKRLDPHFSYGPIKDIGHICSLEPWDLATESETDSEDQTCYFFYKPRYTKSNDAHRATNAGSWKVTRKVSQIEARNGLTGTKKSLTFYLRGLPRKEAITEWGMHEYHVKDDPSYEKEFVLCRIFRRRN*****************************************************SISYPRNLNVQNTFAYPQSIT**************G*THTYPQQLPNHNS**Y*GNRIEQNMYLLKYL*********************************************************N*NLEWQLPLHHPLEIHNSAENPFRKDVSQLEKSRHTVATIG
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MESHMREWYKSQPSDELILCLLKKKRLDPHFSYGPIKDIGHICSLEPWDLATESETDSEDQTCYFFYKPRYTKSNDAHRATNAGSWKVTRKVSQIEARNGLTGTKKSLTFYLRGLPRKEAITEWGMHEYHVKDDPSYEKEFVLCRIFRRRNKKKRGISTTDEGESSEQLVSSPQQSPCDHSISNGNHSEESTHTIPQQQLQYHNSISYPRNLNVQNTFAYPQSITDDSPTQLSPGNHSEGTTHTYPQQLPNHNSISYTGNRIEQNMYLLKYLPNYSPAQQLPCDHFISARNYSEEYVPINQQPQPNDNLISHLGSQIEGFSPTNSLLPQNSNLEWQLPLHHPLEIHNSAENPFRKDVSQLEKSRHTVATIG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	371	2.2.26 [Sep-21-2011]
Q9FWX2	395	NAC domain-containing pro	yes	no	0.423	0.397	0.319	6e-16
Q9SV87	341	Protein BEARSKIN1 OS=Arab	no	no	0.517	0.563	0.305	1e-14
Q84K00	567	NAC domain-containing pro	no	no	0.644	0.421	0.262	2e-14
Q94F58	340	NAC domain-containing pro	no	no	0.371	0.405	0.369	3e-13
Q9C878	305	Protein BEARSKIN1 OS=Arab	no	no	0.393	0.478	0.324	4e-13
Q7GCL7	489	NAC domain-containing pro	no	no	0.361	0.274	0.356	5e-13
Q9FLJ2	336	NAC domain-containing pro	no	no	0.390	0.431	0.329	9e-13
Q9M126	457	NAC domain-containing pro	no	no	0.436	0.354	0.319	7e-12
Q9S851	334	Protein CUP-SHAPED COTYLE	no	no	0.388	0.431	0.313	1e-11
O81913	359	NAC domain-containing pro	no	no	0.417	0.431	0.307	2e-11

>sp|Q9FWX2|NAC7_ARATH NAC domain-containing protein 7 OS=Arabidopsis thaliana GN=NAC007 PE=2 SV=2

 Score = 85.5 bits (210), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 86/166 (51%), Gaps = 9/166 (5%)

Query: 3   SHMREWYKSQPSDE-LILCLLKKKRLDPHFSYGPIKDIGHICSLEPWDLATESETDSEDQ 61
           SH+   ++  P+DE L+   L+KK          IKDI  +  +EPWDL    +   E+Q
Sbjct: 5   SHVPPGFRFHPTDEELVDYYLRKKVASKRIEIDFIKDID-LYKIEPWDLQELCKIGHEEQ 63

Query: 62  TCYFFYK---PRYTKSNDAHRATNAGSWKVTRKVSQIEARNGLTGTKKSLTFYLRGLPRK 118
           + ++F+     +Y      +RAT AG WK T +   I  R+ L G +K+L FY    P  
Sbjct: 64  SDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYLRHSLIGMRKTLVFYKGRAPNG 123

Query: 119 EAITEWGMHEYHVKDDPS---YEKEFVLCRIFRRRNKKKRGISTTD 161
           +  ++W MHEY ++ D +    E+ +V+CR+F++R    R +   D
Sbjct: 124 QK-SDWIMHEYRLETDENGTPQEEGWVVCRVFKKRLAAVRRMGDYD 168

Transcription factor probably involved in xylem formation.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9SV87|BRN2_ARATH Protein BEARSKIN1 OS=Arabidopsis thaliana GN=BRN2 PE=2 SV=1

 Score = 80.9 bits (198), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 108/216 (50%), Gaps = 24/216 (11%)

Query: 9   YKSQPSDELIL-CLLKKKRLDPHFSYGPIKDIGHICSLEPWDLATESETDSEDQTCYFFY 67
           ++  P+DE +L   LKKK     F    I+++  +  LEPWDL    +  S  Q  ++F+
Sbjct: 13  FRFHPTDEELLHYYLKKKISYQKFEMEVIREV-DLNKLEPWDLQERCKIGSTPQNEWYFF 71

Query: 68  K---PRYTKSNDAHRATNAGSWKVTRKVSQIEARNGLTGTKKSLTFYLRGLPRKEAITEW 124
                +Y   +  +RAT+AG WK T +   I       G +K+L FY    P  +  T+W
Sbjct: 72  SHKDRKYPTGSRTNRATHAGFWKATGRDKCIRNSYKKIGMRKTLVFYKGRAPHGQK-TDW 130

Query: 125 GMHEYHVK--DDPSY---EKEFVLCRIFRRRNKKKRGISTTDEGESSEQLVSSPQQSPCD 179
            MHEY ++  DDP     E  +V+CR+F ++N  K      +EG SS   ++S  Q   +
Sbjct: 131 IMHEYRLEDADDPQANPSEDGWVVCRVFMKKNLFK----VVNEGSSS---INSLDQH--N 181

Query: 180 HSISNGNHSEESTHTI----PQQQLQYHNSISYPRN 211
           H  SN NH+ ++   +    P Q ++ H ++++  N
Sbjct: 182 HDASNNNHALQARSFMHRDSPYQLVRNHGAMTFELN 217

Transcription activator. Together with BRN1 and SMB, regulates cellular maturation of root cap. Promotes the expression of genes involved in secondary cell walls (SCW) biosynthesis.

Arabidopsis thaliana (taxid: 3702)

>sp|Q84K00|NAC78_ARATH NAC domain-containing protein 78 OS=Arabidopsis thaliana GN=NAC078 PE=2 SV=2

 Score = 80.9 bits (198), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/270 (26%), Positives = 118/270 (43%), Gaps = 31/270 (11%)

Query: 9   YKSQPSDE-LILCLLKKKRLDPHFSYGPIKDIGHICSLEPWDLATESETDSEDQTCYFF- 66
           ++  P+DE L+   LK+K  +  F +  I  +  I   EPWDL  +S+  S D   YFF 
Sbjct: 13  FRFHPTDEELVRYYLKRKVCNKPFKFDAIS-VTDIYKSEPWDLPDKSKLKSRDLEWYFFS 71

Query: 67  -YKPRYTKSNDAHRATNAGSWKVTRKVSQIEARNGLTGTKKSLTFYLRGLPRKEAITEWG 125
               +Y+  +  +RAT  G WK T K  +I   + + G KK+L ++    PR E  T W 
Sbjct: 72  MLDKKYSNGSKTNRATEKGYWKTTGKDREIRNGSRVVGMKKTLVYHKGRAPRGER-TNWV 130

Query: 126 MHEYHVKDDPSY-----EKEFVLCRIFRR-----RNKKKRGISTTDEGESSEQLVSSPQQ 175
           MHEY + D+        ++ +VLCRIF++     +N ++ G    +E    + +   P Q
Sbjct: 131 MHEYRLSDEDLKKAGVPQEAYVLCRIFQKSGTGPKNGEQYGAPYLEEEWEEDGMTYVPAQ 190

Query: 176 SPCDHSISNGNHSEESTHTIPQQQLQYHNSISYPRNLNVQNTF-AYPQSITDDSPTQLSP 234
                 ++  +        I ++          P NL V +     P     +S   +  
Sbjct: 191 DAFSEGLALNDDVYVDIDDIDEK----------PENLVVYDAVPILPNYCHGESSNNVES 240

Query: 235 GNHSEGTTHTYPQQLPNHNSISYTGNRIEQ 264
           GN+S+   +  P      N++  +G   EQ
Sbjct: 241 GNYSDSGNYIQP-----GNNVVDSGGYFEQ 265

Arabidopsis thaliana (taxid: 3702)

>sp|Q94F58|NAC89_ARATH NAC domain-containing protein 89 OS=Arabidopsis thaliana GN=NAC089 PE=1 SV=1

 Score = 76.3 bits (186), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/149 (36%), Positives = 81/149 (54%), Gaps = 11/149 (7%)

Query: 9   YKSQPSD-ELILCLLKKKRLDPHFSYGPIKDIGHICSLEPWDLATESETDSEDQTCYFFY 67
           +K  P+D ELI   LK+K      S   I D+  I + EPWDL  +S   S+ +  +FF+
Sbjct: 25  FKFSPTDVELISYYLKRKMDGLERSVEVIPDL-EIYNFEPWDLPDKSIVKSDSE--WFFF 81

Query: 68  KPR---YTKSNDAHRATNAGSWKVTRKVSQIEARNGLTGTKKSLTFYLRGLPRKEAITEW 124
             R   Y   +   RAT  G WK T K   +++ + + GTK++L F++   P+ E  T+W
Sbjct: 82  CARGKKYPHGSQNRRATKMGYWKATGKERDVKSGSEVIGTKRTLVFHIGRAPKGER-TDW 140

Query: 125 GMHEYHVKDDPSYEKEFVLCRIFRRRNKK 153
            MHEY VK   S +   V+CR+  RRNK+
Sbjct: 141 IMHEYCVK-GVSLDDAMVVCRV--RRNKE 166

Transcription factor involved in plant cell division.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C878|BRN1_ARATH Protein BEARSKIN1 OS=Arabidopsis thaliana GN=BRN1 PE=2 SV=1

 Score = 76.3 bits (186), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 80/154 (51%), Gaps = 8/154 (5%)

Query: 9   YKSQPSDELIL-CLLKKKRLDPHFSYGPIKDIGHICSLEPWDLATESETDSEDQTCYFFY 67
           ++  P+DE +L   LKKK     F    IK++  +  +EPWDL    +  S  Q  ++F+
Sbjct: 12  FRFHPTDEELLHYYLKKKISYEKFEMEVIKEV-DLNKIEPWDLQDRCKIGSTPQNEWYFF 70

Query: 68  K---PRYTKSNDAHRATNAGSWKVTRKVSQIEARNGLTGTKKSLTFYLRGLPRKEAITEW 124
                +Y   +  +RAT++G WK T +   I       G +K+L FY    P  +  T+W
Sbjct: 71  SHKDRKYPTGSRTNRATHSGFWKATGRDKCIRNSYKKIGMRKTLVFYKGRAPHGQK-TDW 129

Query: 125 GMHEYHVKD--DPSYEKEFVLCRIFRRRNKKKRG 156
            MHEY ++D  D   E  +V+CR+F+++N  K G
Sbjct: 130 IMHEYRIEDTEDDPCEDGWVVCRVFKKKNLFKVG 163

Transcription activator. Together with SMB and BRN2, regulates cellular maturation of root cap. Promotes the expression of genes involved in secondary cell walls (SCW) biosynthesis.

Arabidopsis thaliana (taxid: 3702)

>sp|Q7GCL7|NAC74_ORYSJ NAC domain-containing protein 74 OS=Oryza sativa subsp. japonica GN=NAC74 PE=2 SV=1

 Score = 75.9 bits (185), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 72/143 (50%), Gaps = 9/143 (6%)

Query: 16  ELILCLLKKKRLDPHFSYGPIKDIGHICSLEPWDLATESETDSEDQTCYFFYKP--RYTK 73
           ELI   LKKK       Y  I ++  I   EPWDL  + +  ++D   +FF     +Y  
Sbjct: 21  ELISHYLKKKIHGQKIEYEIIPEV-DIYKHEPWDLPAKCDVPTQDNKWHFFAARDRKYPN 79

Query: 74  SNDAHRATNAGSWKVTRKVSQIEARNGLTGTKKSLTFYLRGLPRKEAITEWGMHEYHVKD 133
            + ++RAT AG WK T K   I+      GTKK+L F+  G P     TEW MHEY++ +
Sbjct: 80  GSRSNRATVAGYWKSTGKDRAIKMGKQTIGTKKTLVFH-EGRPPTGRRTEWIMHEYYIDE 138

Query: 134 D-----PSYEKEFVLCRIFRRRN 151
                 P  +  +VLCRI +R +
Sbjct: 139 RECQACPDMKDAYVLCRITKRND 161

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9FLJ2|NC100_ARATH NAC domain-containing protein 100 OS=Arabidopsis thaliana GN=NAC100 PE=2 SV=1

 Score = 75.1 bits (183), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 76/155 (49%), Gaps = 10/155 (6%)

Query: 9   YKSQPSDE-LILCLLKKKRLDPHFSYGPIKDIGHICSLEPWDLATESETDSEDQTCYFFY 67
           ++  P+DE LI   L KK LD  FS   I ++  +   EPW+L   ++   ++   +   
Sbjct: 20  FRFHPTDEELITHYLHKKVLDTSFSAKAIGEV-DLNKSEPWELPWMAKMGEKEWYFFCVR 78

Query: 68  KPRYTKSNDAHRATNAGSWKVTRKVSQIEARNGLTGTKKSLTFYLRGLPRKEAITEWGMH 127
             +Y      +RAT AG WK T K  +I     L G KK+L FY RG   K   T W MH
Sbjct: 79  DRKYPTGLRTNRATEAGYWKATGKDKEIYRGKSLVGMKKTLVFY-RGRAPKGQKTNWVMH 137

Query: 128 EYHVKDDPS-------YEKEFVLCRIFRRRNKKKR 155
           EY ++   S        + E+V+CR+F++    K+
Sbjct: 138 EYRLEGKFSAHNLPKTAKNEWVICRVFQKSAGGKK 172

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M126|NAC69_ARATH NAC domain-containing protein 69 OS=Arabidopsis thaliana GN=NAC69 PE=2 SV=1

 Score = 72.0 bits (175), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 54/169 (31%), Positives = 79/169 (46%), Gaps = 7/169 (4%)

Query: 9   YKSQPS-DELILCLLKKKRLDPHFSYGPIKDIGHICSLEPWDLATESETDSEDQTCYFFY 67
           Y+  P+ +ELI   LK K L   +         +ICS +P  L + S+  S+D   YFF 
Sbjct: 8   YRFYPTGEELINHYLKNKILGKTWLVDEAISEINICSYDPIYLPSLSKIKSDDPVWYFFC 67

Query: 68  KPRYT--KSNDAHRATNAGSWKVT---RKVSQIEARNGLTGTKKSLTFYLRGLPRKEAIT 122
              YT  K     R T++G WK T   RK+       G  G KK+L +Y   +P K   T
Sbjct: 68  PKEYTSAKKKVTKRTTSSGYWKATGVDRKIKDKRGNRGEIGIKKTLVYYEGRVP-KGVWT 126

Query: 123 EWGMHEYHVKDDPSYEKEFVLCRIFRRRNKKKRGISTTDEGESSEQLVS 171
            W MHEYH+   P  ++ +V+C++  +           +  E S+ LVS
Sbjct: 127 PWVMHEYHITCLPQDQRNYVICQVMYKGEDGDVPSGGNNSSEPSQSLVS 175

Transcription activator activated by proteolytic cleavage through regulated intramembrane proteolysis mediated by calpain or its functional homolog. Regulates cytokinin signaling during cell division.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9S851|NAC31_ARATH Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana GN=NAC031 PE=1 SV=1

 Score = 71.6 bits (174), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 76/153 (49%), Gaps = 9/153 (5%)

Query: 9   YKSQPSDE-LILCLLKKKRLDPHFSYGPIKDIGHICSLEPWDLATESETDSEDQTCYFFY 67
           ++  P+DE LI   L  K      S   I ++  +   EPW+L   ++    +   Y   
Sbjct: 26  FRFHPTDEELITFYLASKIFHGGLSGIHISEV-DLNRCEPWELPEMAKMGEREWYFYSLR 84

Query: 68  KPRYTKSNDAHRATNAGSWKVTRKVSQIEARNG--LTGTKKSLTFYLRGLPRKEAITEWG 125
             +Y      +RAT AG WK T K  ++ +  G  L G KK+L FY    PR    T+W 
Sbjct: 85  DRKYPTGLRTNRATTAGYWKATGKDKEVFSGGGGQLVGMKKTLVFYKGRAPRGLK-TKWV 143

Query: 126 MHEYHVKDDPSY----EKEFVLCRIFRRRNKKK 154
           MHEY +++D S+    ++E+V+CR+F +   +K
Sbjct: 144 MHEYRLENDHSHRHTCKEEWVICRVFNKTGDRK 176

Transcription activator. Involved in molecular mechanisms regulating shoot apical meristem (SAM) formation during embryogenesis and organ separation. Required for axillary meristem initiation and separation of the meristem from the main stem. May act as an inhibitor of cell division.

Arabidopsis thaliana (taxid: 3702)

>sp|O81913|NAC4_ARATH NAC domain-containing protein 4 OS=Arabidopsis thaliana GN=NAC004 PE=2 SV=2

 Score = 70.1 bits (170), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 83/169 (49%), Gaps = 14/169 (8%)

Query: 9   YKSQPSDELILC-LLKKKRLDPHFSY-GPIKDIGHICSLEPWDLATESETDSEDQTCYFF 66
           ++ +P+DE I+   L+ K LD   S+   +     ICS EPWDL ++S   S D   YFF
Sbjct: 7   FRFRPNDEEIVDHYLRPKNLDSDTSHVDEVISTVDICSFEPWDLPSKSMIKSRDGVWYFF 66

Query: 67  --YKPRYTKSNDAHRATNAGSWKVTRKVSQIEARNG---LTGTKKSLTFYLRGLPRKEAI 121
              + +Y + +   R TN+G WK T K   +  + G     G K+ L F  R   +    
Sbjct: 67  SVKEMKYNRGDQQRRRTNSGFWKKTGKTMTVMRKRGNREKIGEKRVLVFKNRDGSK---- 122

Query: 122 TEWGMHEYHVKD-DPSYEKEFVLCRIFRRRNKKKRGISTTDEGESSEQL 169
           T+W MHEYH     P+    + +C++  +  + +  IS++  G   EQ+
Sbjct: 123 TDWVMHEYHATSLFPNQMMTYTVCKVEFKGEETE--ISSSSTGSEIEQI 169

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	371
255548095	612	transcription factor, putative [Ricinus	0.417	0.253	0.344	3e-18
356560207	1061	PREDICTED: uncharacterized protein LOC10	0.442	0.154	0.370	2e-16
449526798	518	PREDICTED: uncharacterized LOC101203389	0.382	0.274	0.387	5e-16
449445005	506	PREDICTED: uncharacterized protein LOC10	0.382	0.280	0.387	7e-16
356522462	497	PREDICTED: NAC domain-containing protein	0.442	0.329	0.370	9e-16
356547116	370	PREDICTED: NAC domain-containing protein	0.471	0.472	0.310	2e-15
449443648	366	PREDICTED: NAC domain-containing protein	0.495	0.502	0.331	3e-15
449492840	350	PREDICTED: NAC domain-containing protein	0.495	0.525	0.331	4e-15
357453161	589	NAC domain protein [Medicago truncatula]	0.425	0.268	0.327	4e-15
242079245	364	hypothetical protein SORBIDRAFT_07g02120	0.377	0.384	0.369	1e-14

>gi|255548095|ref|XP_002515104.1| transcription factor, putative [Ricinus communis] gi|223545584|gb|EEF47088.1| transcription factor, putative [Ricinus communis]

 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 60/174 (34%), Positives = 87/174 (50%), Gaps = 19/174 (10%)

Query: 6   REWYKSQPSDELILCLLKKKRLDPH-FSYGPIKDIGHICSLEPWDLATESETDSEDQTCY 64
           R  Y+  P+DE ++    + ++D H F       +  +C  +PWDL   +   S DQ  Y
Sbjct: 4   RVGYRFHPTDEELVSYFLRHKIDGHDFLVDDDIHVIDLCKFDPWDLPGFASQGSNDQVWY 63

Query: 65  FFY----------KPRYTKSNDAHRATNAGSWKVTRKVSQIEARNG--LTGTKKSLTFYL 112
           FFY          KPRY ++     AT  G WK T     ++A+    + G K++L FYL
Sbjct: 64  FFYRRELKYKSPSKPRYNRTT----ATGTGHWKPTGAERLVKAKRTKRVIGVKRTLVFYL 119

Query: 113 RGLPRKEAITEWGMHEYHVKDDPSYEKEFVLCRIFRRRNKKKRGISTTDEGESS 166
           RG P KE  T W +HEY  K  P ++ + VLC++ + +   K   S  DEGESS
Sbjct: 120 RGTP-KEVKTNWVIHEYEPKTSPPHQADLVLCKL-KEKADNKADTSGCDEGESS 171

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356560207|ref|XP_003548385.1| PREDICTED: uncharacterized protein LOC100778755 [Glycine max]

 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/178 (37%), Positives = 95/178 (53%), Gaps = 14/178 (7%)

Query: 4   HMREWYKSQPSDE-LILCLLKKKRLDPHFSYGPIKDIGHICSLEPWDLATESETDSEDQT 62
           HM   ++ +P+DE L+   LK K L   F    I +I  +C +EPWD+   S   S+D  
Sbjct: 10  HMPVGFRFRPTDEELVDYYLKHKLLADDFPVHIIPEI-DLCKVEPWDVPGRSVIKSDDPE 68

Query: 63  CYFFYKP---RYTKSNDAHRATNAGSWKVT---RKVSQIEARNGLTGTKKSLTFYLRGLP 116
            +FF+ P   +Y KS   +R T  G WK T   RK+ +I   + + GTKK+L F+   +P
Sbjct: 69  -WFFFSPVDYKYLKSKRFNRTTKRGFWKATGNDRKI-RIPGTSNVIGTKKTLVFHQGRVP 126

Query: 117 RKEAITEWGMHEYHVKDDPSYEKEFVLCRIFRRRNKKKRG---ISTTDEGESSEQLVS 171
           R  A T W +HEYH       ++ FVLCR+ ++  KK  G     + DEGE S  +VS
Sbjct: 127 RG-AKTNWVIHEYHAVTSHESQRAFVLCRLMKKAEKKNEGGIEAPSFDEGEPSIHMVS 183

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449526798|ref|XP_004170400.1| PREDICTED: uncharacterized LOC101203389 [Cucumis sativus]

 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 60/155 (38%), Positives = 78/155 (50%), Gaps = 13/155 (8%)

Query: 9   YKSQPSDE-LILCLLKKKRLDPHFSYGPIKDIGHICSLEPWDLATESETDSEDQTCYFFY 67
           ++  P DE LIL  LKKK      S   I +I  IC  EPWDL  +S   SE++  +FF+
Sbjct: 21  FRFSPKDEELILFYLKKKLEGSDDSVDVISEI-EICKFEPWDLPGKSRIPSENE--WFFF 77

Query: 68  KPR---YTKSNDAHRATNAGSWKVTRKVSQIEARNGLTGTKKSLTFYLRGLPRKEAITEW 124
            PR   Y       RAT  G WK T K   ++  + + GTK++L F+L   P  E  TEW
Sbjct: 78  SPRGRKYPNGTQNKRATELGYWKATGKERNVKTGSEIIGTKRTLVFHLGRAPTGER-TEW 136

Query: 125 GMHEYHVKDDPSYEKEFVLCRI-----FRRRNKKK 154
            MHEY + D        V+CR+     FRR N  K
Sbjct: 137 IMHEYCLNDKSQDSNSMVVCRLRKNNDFRRNNADK 171

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449445005|ref|XP_004140264.1| PREDICTED: uncharacterized protein LOC101203389 [Cucumis sativus]

 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 60/155 (38%), Positives = 78/155 (50%), Gaps = 13/155 (8%)

Query: 9   YKSQPSDE-LILCLLKKKRLDPHFSYGPIKDIGHICSLEPWDLATESETDSEDQTCYFFY 67
           ++  P DE LIL  LKKK      S   I +I  IC  EPWDL  +S   SE++  +FF+
Sbjct: 21  FRFSPKDEELILFYLKKKLEGSDDSVDVISEI-EICKFEPWDLPGKSRIPSENE--WFFF 77

Query: 68  KPR---YTKSNDAHRATNAGSWKVTRKVSQIEARNGLTGTKKSLTFYLRGLPRKEAITEW 124
            PR   Y       RAT  G WK T K   ++  + + GTK++L F+L   P  E  TEW
Sbjct: 78  SPRGRKYPNGTQNKRATELGYWKATGKERNVKTGSEIIGTKRTLVFHLGRAPTGER-TEW 136

Query: 125 GMHEYHVKDDPSYEKEFVLCRI-----FRRRNKKK 154
            MHEY + D        V+CR+     FRR N  K
Sbjct: 137 IMHEYCLNDKSQDSNSMVVCRLRKNNDFRRNNADK 171

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356522462|ref|XP_003529865.1| PREDICTED: NAC domain-containing protein 69-like [Glycine max]

 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 66/178 (37%), Positives = 91/178 (51%), Gaps = 14/178 (7%)

Query: 4   HMREWYKSQPSDE-LILCLLKKKRLDPHFSYGPIKDIGHICSLEPWDLATESETDSEDQT 62
           HM   ++ +P+DE L+   LK K L   F    I +I  +C +EPWD+   S   S+D  
Sbjct: 11  HMPVGFRFRPTDEELVNYYLKHKLLADDFPVHIIPEID-LCKVEPWDVPERSVIKSDDPE 69

Query: 63  CYFFYKP---RYTKSNDAHRATNAGSWKVT---RKVSQIEARNGLTGTKKSLTFYLRGLP 116
            +FF+ P   +Y KS   +R T  G WK T   R V +I   + + GTKK+L F+    P
Sbjct: 70  -WFFFSPVDYKYLKSKRFNRTTKRGYWKTTGNDRNV-KIPGTSNVIGTKKTLVFHEGRGP 127

Query: 117 RKEAITEWGMHEYHVKDDPSYEKEFVLCRIFRRRNKKKRG---ISTTDEGESSEQLVS 171
           R    T W +HEYH       ++ FVLCR+ ++  KK  G     T DEGE S  L S
Sbjct: 128 RG-VKTNWVIHEYHAVTSHESQRAFVLCRLMKKAEKKNEGGIEAPTFDEGEPSVHLFS 184

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356547116|ref|XP_003541963.1| PREDICTED: NAC domain-containing protein 48-like [Glycine max]

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 99/187 (52%), Gaps = 12/187 (6%)

Query: 3   SHMREWYKSQPSDELILCLLKKKRLDPHFSYGPIKDIGHICSLEPWDLATESETDSEDQT 62
           S M   ++  P+DE ++    +K+L+ H     +     +C  EPWDL  +S   S+++ 
Sbjct: 15  SSMFPGFRFCPTDEELISYYLRKKLEGHEESVQVISEVELCKYEPWDLPAKSFIQSDNE- 73

Query: 63  CYFFYKPR---YTKSNDAHRATNAGSWKVTRKVSQIEARNGLTGTKKSLTFYLRGLPRKE 119
            +FF+ PR   Y   + + RAT  G WK T K   +++ + + GTK++L F+L   P+ E
Sbjct: 74  -WFFFSPRGRKYPNGSQSKRATECGYWKATGKERNVKSGSNIIGTKRTLVFHLGRAPKGE 132

Query: 120 AITEWGMHEYHVKDDPSYEKEFVLCRIFRRRNKKKRGISTTDEGESSEQLVSSPQQSPCD 179
             TEW MHEY + D    ++  V+CR+  +RN + R    ++   SS++   +  +S C 
Sbjct: 133 R-TEWIMHEYCINDKS--QESLVICRL--KRNTEFRLSDASNRASSSQRHPVNSHESGC- 186

Query: 180 HSISNGN 186
            +IS G 
Sbjct: 187 -AISGGG 192

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449443648|ref|XP_004139589.1| PREDICTED: NAC domain-containing protein 89-like [Cucumis sativus]

 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 103/199 (51%), Gaps = 15/199 (7%)

Query: 3   SHMREWYKSQPSDELILCLLKKKRLDPH-FSYGPIKDIGHICSLEPWDLATESETDSEDQ 61
           S M   ++  P+DE ++    KK+L+ +  S   I D+  I   EPWDL  +S   S+++
Sbjct: 20  SSMFPGFRFSPTDEELISFYLKKKLEGYEKSVEVIADV-EIYKYEPWDLPAKSIIQSDNE 78

Query: 62  TCYFFYKPR---YTKSNDAHRATNAGSWKVTRKVSQIEARNGLTGTKKSLTFYLRGLPRK 118
             +FF+ PR   Y   N   RAT+ G WK T K   +++ +   GTK++L F+    P+ 
Sbjct: 79  --WFFFSPRGKKYPNGNQTRRATDLGYWKATGKERNVKSGSNTIGTKRTLVFHTGRAPKG 136

Query: 119 EAITEWGMHEYHVKDDPSYEKEFVLCRIFRRRNKKKRGISTTDEGESSEQ---LVSSPQQ 175
           E  TEW MHEY+ KD    +   V+CR+  RRN + R  S ++   SS+    L+ +   
Sbjct: 137 ER-TEWIMHEYNTKDKA--QDFLVVCRL--RRNNEFRQHSCSNRASSSQMNLSLLQAHSS 191

Query: 176 SPCDHSISNGNHSEESTHT 194
              D + SN   + E+TH 
Sbjct: 192 EQVDSTESNQKDAAETTHV 210

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449492840|ref|XP_004159117.1| PREDICTED: NAC domain-containing protein 89-like [Cucumis sativus]

 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 103/199 (51%), Gaps = 15/199 (7%)

Query: 3   SHMREWYKSQPSDELILCLLKKKRLDPH-FSYGPIKDIGHICSLEPWDLATESETDSEDQ 61
           S M   ++  P+DE ++    KK+L+ +  S   I D+  I   EPWDL  +S   S+++
Sbjct: 4   SSMFPGFRFSPTDEELISFYLKKKLEGYEKSVEVIADV-EIYKYEPWDLPAKSIIQSDNE 62

Query: 62  TCYFFYKPR---YTKSNDAHRATNAGSWKVTRKVSQIEARNGLTGTKKSLTFYLRGLPRK 118
             +FF+ PR   Y   N   RAT+ G WK T K   +++ +   GTK++L F+    P+ 
Sbjct: 63  --WFFFSPRGKKYPNGNQTRRATDLGYWKATGKERNVKSGSNTIGTKRTLVFHTGRAPKG 120

Query: 119 EAITEWGMHEYHVKDDPSYEKEFVLCRIFRRRNKKKRGISTTDEGESSEQ---LVSSPQQ 175
           E  TEW MHEY+ KD    +   V+CR+  RRN + R  S ++   SS+    L+ +   
Sbjct: 121 ER-TEWIMHEYNTKDKA--QDFLVVCRL--RRNNEFRQHSCSNRASSSQMNLSLLQAHSS 175

Query: 176 SPCDHSISNGNHSEESTHT 194
              D + SN   + E+TH 
Sbjct: 176 EQVDSTESNQKDAAETTHV 194

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357453161|ref|XP_003596857.1| NAC domain protein [Medicago truncatula] gi|355485905|gb|AES67108.1| NAC domain protein [Medicago truncatula]

 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 55/168 (32%), Positives = 89/168 (52%), Gaps = 10/168 (5%)

Query: 3   SHMREWYKSQPSDELILCLLKKKRLDPHFSYGPIKDIGHICSLEPWDLATESETDSEDQT 62
           S M   ++  P+DE ++    +K+LD H     +     +C  EPWDL  +S   S+++ 
Sbjct: 16  SSMFPGFRFCPTDEELISYYLRKKLDGHEESVQVISEVELCKYEPWDLPAKSFIQSDNE- 74

Query: 63  CYFFYKPR---YTKSNDAHRATNAGSWKVTRKVSQIEARNGLTGTKKSLTFYLRGLPRKE 119
            +FF+ PR   Y   + + RAT+ G WK T K   +++ + + GTK++L F+L   P+ E
Sbjct: 75  -WFFFSPRGRKYPNGSQSKRATDCGYWKATGKERNVKSGSNVIGTKRTLVFHLGRAPKGE 133

Query: 120 AITEWGMHEYHVKDDPSYEKEFVLCRIFRRRNKKKRGISTTDEGESSE 167
             TEW MHEY V D        V+CR+  +RN + R    ++   SS+
Sbjct: 134 R-TEWIMHEYCVSDRSP--DSLVVCRL--KRNTEFRVNDASNRASSSQ 176

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242079245|ref|XP_002444391.1| hypothetical protein SORBIDRAFT_07g021200 [Sorghum bicolor] gi|241940741|gb|EES13886.1| hypothetical protein SORBIDRAFT_07g021200 [Sorghum bicolor]

 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/157 (36%), Positives = 85/157 (54%), Gaps = 17/157 (10%)

Query: 9   YKSQPSDE-LILCLLKKKRLDPHFSYGPIKDIGHICSLEPWDLATE--SETDSEDQTCYF 65
           ++  P+DE LI C L +K +D  F+   I+D+  +   EPWDL  E  +    + Q  YF
Sbjct: 20  FRFFPTDEELITCYLARKAMDASFTTAAIRDV-DLYKTEPWDLPCEQQAAAGGDLQEGYF 78

Query: 66  FYKPRYTKS---NDAHRATNAGSWKVTRKVSQIEARNG--LTGTKKSLTFYLRGLPRKEA 120
           F   R +KS     A RAT  G WK T K   + +R+G  + GT+K+L FY    PR E 
Sbjct: 79  FCM-RGSKSPSGVRARRATQLGYWKSTGKDKAVHSRSGRLVVGTRKTLVFYRGRAPRGEK 137

Query: 121 ITEWGMHEYHVKDDPS------YEKEFVLCRIFRRRN 151
            T+W MHEY + +  S       + E+V+CR+F R++
Sbjct: 138 -TDWVMHEYAMGERRSSALLRGAQSEWVICRVFTRKH 173

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	371
TAIR|locus:2202028	395	NAC007 "NAC 007" [Arabidopsis	0.563	0.529	0.303	1.1e-17
TAIR|locus:2095007	314	NAC058 "NAC domain containing	0.776	0.917	0.271	2.7e-17
TAIR|locus:2061082	316	NAC038 "NAC domain containing	0.636	0.746	0.3	4.6e-17
TAIR|locus:2122804	341	NAC070 "NAC domain containing	0.517	0.563	0.324	5.4e-17
TAIR|locus:2196641	305	NAC015 "NAC domain containing	0.541	0.659	0.328	8.1e-17
TAIR|locus:2167923	348	NAC101 "NAC-domain protein 101	0.824	0.879	0.266	9e-17
TAIR|locus:2164895	285	NAC6 "NAC domain containing pr	0.638	0.831	0.280	1.1e-16
TAIR|locus:2128013	534	NTL9 "NAC transcription factor	0.450	0.312	0.344	1.2e-16
TAIR|locus:2039600	335	NTL8 "NTM1-like 8" [Arabidopsi	0.477	0.528	0.331	1.6e-16
TAIR|locus:2089764	246	NAC057 "NAC domain containing	0.595	0.898	0.304	3.9e-16

TAIR|locus:2202028 NAC007 "NAC 007" [Arabidopsis thaliana (taxid:3702)]

 Score = 235 (87.8 bits), Expect = 1.1e-17, P = 1.1e-17
 Identities = 69/227 (30%), Positives = 113/227 (49%)

Query:     3 SHMREWYKSQPSDE-LILCLLKKKRLDPHFSYGPIKDIGHICSLEPWDLATESETDSEDQ 61
             SH+   ++  P+DE L+   L+KK          IKDI  +  +EPWDL    +   E+Q
Sbjct:     5 SHVPPGFRFHPTDEELVDYYLRKKVASKRIEIDFIKDID-LYKIEPWDLQELCKIGHEEQ 63

Query:    62 TCYFFYK---PRYTKSNDAHRATNAGSWKVTRKVSQIEARNGLTGTKKSLTFYLRGLPRK 118
             + ++F+     +Y      +RAT AG WK T +   I  R+ L G +K+L FY    P  
Sbjct:    64 SDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYLRHSLIGMRKTLVFYKGRAPNG 123

Query:   119 EAITEWGMHEYHVKDDPS---YEKEFVLCRIFRRRNKKKRGISTTDEGES---SEQL--V 170
             +  ++W MHEY ++ D +    E+ +V+CR+F++R    R +   D   S    +QL  +
Sbjct:   124 QK-SDWIMHEYRLETDENGTPQEEGWVVCRVFKKRLAAVRRMGDYDSSPSHWYDDQLSFM 182

Query:   171 SSPQQSPCDHSISNGNHSEESTHTIPQQQLQYH-NSISYP-RNLNVQ 215
             +S  ++     I   NH ++  H   QQ + Y  N+ +Y   N N+Q
Sbjct:   183 ASELETNGQRRILP-NHHQQQQHE-HQQHMPYGLNASAYALNNPNLQ 227

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0009793 "embryo development ending in seed dormancy" evidence=NAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0042546 "cell wall biogenesis" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

TAIR|locus:2095007 NAC058 "NAC domain containing protein 58" [Arabidopsis thaliana (taxid:3702)]

 Score = 224 (83.9 bits), Expect = 2.7e-17, P = 2.7e-17
 Identities = 87/320 (27%), Positives = 142/320 (44%)

Query:     1 MESHMREWYKSQPSDE-LILCLLKKKRLDPHFSYGPIKDIGHICSLEPWDLATESETDSE 59
             ME ++   ++  P+DE LI   L +K  D  F+   + D+  +   EPWDL  ++    +
Sbjct:     1 MEENLPPGFRFHPTDEELITHYLCRKVSDIGFTGKAVVDVD-LNKCEPWDLPAKASMGEK 59

Query:    60 DQTCYFFYKP--RYTKSNDAHRATNAGSWKVTRKVSQIEARNGLTGTKKSLTFYLRGLPR 117
             +   YFF +   +Y      +RAT AG WK T K  +I     L G KK+L FY    P+
Sbjct:    60 EW--YFFSQRDRKYPTGLRTNRATEAGYWKTTGKDKEIYRSGVLVGMKKTLVFYKGRAPK 117

Query:   118 KEAITEWGMHEYHVKD----DPSYEKEFVLCRIFRRRNKKKRGISTTDEGESSEQLVSSP 173
              E  + W MHEY ++     +P+ ++E+V+CR+F +    K+  +   + +SS+    SP
Sbjct:   118 GEK-SNWVMHEYRLESKQPFNPTNKEEWVVCRVFEKSTAAKK--AQEQQPQSSQPSFGSP 174

Query:   174 QQSPCDHSISNGNHSEESTHTIPQ-----QQLQYHNSISYPRNLNVQNTFAYPQSITDDS 228
                 CD + S  N  E+    +P        + Y+N I      NV +      +   + 
Sbjct:   175 ----CDANSSMANEFEDIDE-LPNLNSNSSTIDYNNHIHQYSQRNVYSEDNTTSTAGLNM 229

Query:   229 PTQLSPGNHSEGTTHTYPQQLPNHNSISYTGNRIEQNMYLL--KYLP--NYSPAQQLPCD 284
                ++  N    TT      L   NS+     +I +N Y    + +P  N+S  QQ    
Sbjct:   230 NMNMASTNLQSWTTSLLGPPLSPINSLLLKAFQI-RNSYSFPKEMIPSFNHSSLQQ-GVS 287

Query:   285 HFISARNYSEEYVPINQQPQ 304
             + I   + S +  P   QPQ
Sbjct:   288 NMIQNASSSSQVQP---QPQ 304

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0010089 "xylem development" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

TAIR|locus:2061082 NAC038 "NAC domain containing protein 38" [Arabidopsis thaliana (taxid:3702)]

 Score = 223 (83.6 bits), Expect = 4.6e-17, P = 4.6e-17
 Identities = 78/260 (30%), Positives = 124/260 (47%)

Query:     9 YKSQPSDE-LILCLLKKKRLDPHFSYGPIKDIGHICSLEPWDLATESETDSEDQTCYFF- 66
             ++  P+DE LI   L  K  D +F+   I D+  +   EPW+L  +++   ++   YFF 
Sbjct:    20 FRFHPTDEELISYYLVNKIADQNFTGKAIADVD-LNKSEPWELPEKAKMGGKEW--YFFS 76

Query:    67 YKPR-YTKSNDAHRATNAGSWKVTRKVSQI--EARNGLTGTKKSLTFYLRGLPRKEAITE 123
              + R Y      +RATN G WK T K  +I     + L G KK+L FY    PR E  T 
Sbjct:    77 LRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSTTSELVGMKKTLVFYRGRAPRGEK-TC 135

Query:   124 WGMHEYHVKDDPSY----EKEFVLCRIFRRRNKKKRGISTTDEGESSEQLVSSPQQSPCD 179
             W MHEY +    SY    + E+V+CR+F++    K+ IST+    S     +  + S   
Sbjct:   136 WVMHEYRLHSKSSYRTSKQDEWVVCRVFKKTEATKKYISTSSSSTSHHHN-NHTRASILS 194

Query:   180 HSISNGNHSEESTHTIPQQQLQYHNSISYPRNLNVQNTFAYPQSITDDSPTQLSPGNHSE 239
              + +N N+S +     P   LQ H S+    N+N Q+  A    + + S    +  + + 
Sbjct:   195 TNNNNPNYSSDLLQLPPH--LQPHPSL----NIN-QSLMANAVHLAELSRVFRASTSTTM 247

Query:   240 GTTHTYPQQLPNHNSISYTG 259
              ++H   QQL N+  +  +G
Sbjct:   248 DSSH---QQLMNYTHMPVSG 264

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2122804 NAC070 "NAC domain containing protein 70" [Arabidopsis thaliana (taxid:3702)]

 Score = 226 (84.6 bits), Expect = 5.4e-17, P = 5.4e-17
 Identities = 70/216 (32%), Positives = 109/216 (50%)

Query:     9 YKSQPSDELIL-CLLKKKRLDPHFSYGPIKDIGHICSLEPWDLATESETDSEDQT-CYFF 66
             ++  P+DE +L   LKKK     F    I+++  +  LEPWDL    +  S  Q   YFF
Sbjct:    13 FRFHPTDEELLHYYLKKKISYQKFEMEVIREVD-LNKLEPWDLQERCKIGSTPQNEWYFF 71

Query:    67 -YKPR-YTKSNDAHRATNAGSWKVTRKVSQIEARNGLTGTKKSLTFYLRGLPRKEAITEW 124
              +K R Y   +  +RAT+AG WK T +   I       G +K+L FY    P  +  T+W
Sbjct:    72 SHKDRKYPTGSRTNRATHAGFWKATGRDKCIRNSYKKIGMRKTLVFYKGRAPHGQK-TDW 130

Query:   125 GMHEYHVKD--DPSY---EKEFVLCRIFRRRNKKKRGISTTDEGESSEQLVSSPQQSPCD 179
              MHEY ++D  DP     E  +V+CR+F ++N  K      +EG SS   ++S  Q   +
Sbjct:   131 IMHEYRLEDADDPQANPSEDGWVVCRVFMKKNLFK----VVNEGSSS---INSLDQH--N 181

Query:   180 HSISNGNHSEESTHTI----PQQQLQYHNSISYPRN 211
             H  SN NH+ ++   +    P Q ++ H ++++  N
Sbjct:   182 HDASNNNHALQARSFMHRDSPYQLVRNHGAMTFELN 217

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009834 "secondary cell wall biogenesis" evidence=IMP

GO:0010628 "positive regulation of gene expression" evidence=IEP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IMP

GO:0048829 "root cap development" evidence=IMP

TAIR|locus:2196641 NAC015 "NAC domain containing protein 15" [Arabidopsis thaliana (taxid:3702)]

 Score = 219 (82.2 bits), Expect = 8.1e-17, P = 8.1e-17
 Identities = 72/219 (32%), Positives = 109/219 (49%)

Query:     9 YKSQPSDELIL-CLLKKKRLDPHFSYGPIKDIGHICSLEPWDLATESETDSEDQT-CYFF 66
             ++  P+DE +L   LKKK     F    IK++  +  +EPWDL    +  S  Q   YFF
Sbjct:    12 FRFHPTDEELLHYYLKKKISYEKFEMEVIKEVD-LNKIEPWDLQDRCKIGSTPQNEWYFF 70

Query:    67 -YKPR-YTKSNDAHRATNAGSWKVTRKVSQIEARNGLTGTKKSLTFYLRGLPRKEAITEW 124
              +K R Y   +  +RAT++G WK T +   I       G +K+L FY    P  +  T+W
Sbjct:    71 SHKDRKYPTGSRTNRATHSGFWKATGRDKCIRNSYKKIGMRKTLVFYKGRAPHGQK-TDW 129

Query:   125 GMHEYHVKD--DPSYEKEFVLCRIFRRRNKKKRGISTTDEGESSEQLVSSP---QQSPCD 179
              MHEY ++D  D   E  +V+CR+F+++N  K G +      S+ +L +     ++SP  
Sbjct:   130 IMHEYRIEDTEDDPCEDGWVVCRVFKKKNLFKVG-NDVGSNISNNRLEARSFIRRESPYQ 188

Query:   180 H-SISNGNHSEE-STHTIPQQQL-QYHN---SISYPRNL 212
               S+   N  EE S H  PQ  + Q H+   SI Y  +L
Sbjct:   189 GISMFELNKPEEISVHQYPQPPMFQPHHKPLSIGYDYSL 227

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009834 "secondary cell wall biogenesis" evidence=IMP

GO:0010628 "positive regulation of gene expression" evidence=IEP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IMP

GO:0048829 "root cap development" evidence=IMP

TAIR|locus:2167923 NAC101 "NAC-domain protein 101" [Arabidopsis thaliana (taxid:3702)]

 Score = 225 (84.3 bits), Expect = 9.0e-17, P = 9.0e-17
 Identities = 88/330 (26%), Positives = 147/330 (44%)

Query:     1 MES--HMREWYKSQPSDE-LILCLLKKKRLDPHFSYGPIKDIGHICSLEPWDLATE-SET 56
             MES  H+   Y+  P+DE L+   LK K   P      IKD+  +  +EPWD+       
Sbjct:     1 MESLAHIPPGYRFHPTDEELVDYYLKNKVAFPGMQVDVIKDVD-LYKIEPWDIQELCGRG 59

Query:    57 DSEDQTCYFF-YKPR-YTKSNDAHRATNAGSWKVTRKVSQIEARNGLTGTKKSLTFYLRG 114
               E++  YFF +K + Y      +RAT +G WK T +   I ++  L G +K+L FY   
Sbjct:    60 TGEEREWYFFSHKDKKYPTGTRTNRATGSGFWKATGRDKAIYSKQELVGMRKTLVFYKGR 119

Query:   115 LPRKEAITEWGMHEYHVKDD---PSYEKEFVLCRIFRRR-NKKKRGISTTDEGESSEQLV 170
              P  +  ++W MHEY ++ D   P +E+ +V+CR F+++          T  G SS Q  
Sbjct:   120 APNGQK-SDWIMHEYRLETDENGPPHEEGWVVCRAFKKKLTTMNYNNPRTMMGSSSGQ-E 177

Query:   171 SSPQQSPCDHSISNGNHSEESTHTIPQQ-QLQYHNSISYPRNLNVQNTFAYPQSITDDSP 229
             S+      D  + NGN+        P+  Q    +S+S   + N Q+ +    S  + +P
Sbjct:   178 SNWFTQQMD--VGNGNYYHLPDLESPRMFQGSSSSSLS-SLHQNDQDPYGVVLSTINATP 234

Query:   230 TQLSPGNHSEGTTHTYPQQLPNHNSISYTGNRIEQNMYLLKYLPNYSPAQQLPCDHFISA 289
             T +   +     T+     +  + S   TG+   Q+  L+    N         D F+++
Sbjct:   235 TTIMQRDDGHVITNDDDHMIMMNTS---TGDH-HQSGLLVNDDHNDQVMDWQTLDKFVAS 290

Query:   290 RNY-SEEYVPINQQPQPNDN--LISHLGSQ 316
             +   S+E   +N+ P  N +     HL  +
Sbjct:   291 QLIMSQEEEEVNKDPSDNSSNETFHHLSEE 320

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0009735 "response to cytokinin stimulus" evidence=IEP

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0009741 "response to brassinosteroid stimulus" evidence=IEP;RCA

GO:0010089 "xylem development" evidence=RCA;IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0007155 "cell adhesion" evidence=RCA

GO:0010014 "meristem initiation" evidence=RCA

GO:0010090 "trichome morphogenesis" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

GO:0045010 "actin nucleation" evidence=RCA

GO:0048765 "root hair cell differentiation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

TAIR|locus:2164895 NAC6 "NAC domain containing protein 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 210 (79.0 bits), Expect = 1.1e-16, P = 1.1e-16
 Identities = 73/260 (28%), Positives = 120/260 (46%)

Query:     9 YKSQPSDE-LILCLLKKKRLDPHFSYGPIKDIGHICSLEPWDLATESETDSEDQTCYFFY 67
             ++  P+DE LI   LK K  +  FS   I ++  +  +EPWDL  +++   E +  +F  
Sbjct:    24 FRFHPTDEELITHYLKPKVFNTFFSATAIGEVD-LNKIEPWDLPWKAKM-GEKEWYFFCV 81

Query:    68 KPR-YTKSNDAHRATNAGSWKVTRKVSQIEARNGLTGTKKSLTFYLRGLPRKEAITEWGM 126
             + R Y      +RAT AG WK T K  +I     L G KK+L FY +G   K   T W M
Sbjct:    82 RDRKYPTGLRTNRATEAGYWKATGKDKEIFKGKSLVGMKKTLVFY-KGRAPKGVKTNWVM 140

Query:   127 HEYH------VKDDPSYEK-EFVLCRIFRRR-NKKKRGISTTDEGESSEQLVSSPQQSPC 178
             HEY       +++ P   K E+V+CR+F++R +  K  +S  D   +  +    P    C
Sbjct:   141 HEYRLEGKYCIENLPQTAKNEWVICRVFQKRADGTKVPMSMLDPHINRMEPAGLPSLMDC 200

Query:   179 ---DHSISNGNH----SEESTHT--IPQQQLQYHNSISYPRNLNVQNTFAYPQSITDDSP 229
                D    + +H    S++ T    +  +      S+ Y   L +Q+ ++  + + D   
Sbjct:   201 SQRDSFTGSSSHVTCFSDQETEDKRLVHESKDGFGSLFYSDPLFLQDNYSLMKLLLDGQE 260

Query:   230 TQLSPGNHSEGTTHTYPQQL 249
             TQ S G   +G   +  ++L
Sbjct:   261 TQFS-GKPFDGRDSSGTEEL 279

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IPI

GO:0006979 "response to oxidative stress" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=IPI

GO:0046982 "protein heterodimerization activity" evidence=IPI

GO:0010150 "leaf senescence" evidence=IEP;IMP

GO:0009651 "response to salt stress" evidence=IEP;RCA

GO:0010468 "regulation of gene expression" evidence=IMP

GO:0000303 "response to superoxide" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009743 "response to carbohydrate stimulus" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009873 "ethylene mediated signaling pathway" evidence=RCA

GO:0010260 "organ senescence" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

TAIR|locus:2128013 NTL9 "NAC transcription factor-like 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 226 (84.6 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
 Identities = 62/180 (34%), Positives = 94/180 (52%)

Query:     9 YKSQPSDE-LILCLLKKKRLDPHFSYGPIKDIGHICSLEPWDLATESETDSEDQTCYFFY 67
             ++ +P+DE L+   L+ K    H     I DI  +C  EPWDL   S   ++D   +FF+
Sbjct:    13 FRFRPTDEELVNHYLRLKINGRHSDVRVIPDID-VCKWEPWDLPALSVIKTDDPE-WFFF 70

Query:    68 KPR---YTKSNDAHRATNAGSWKVTRKVSQIEARNGLTGTKKSLTFYLRGLPRKEAITEW 124
              PR   Y   + ++RAT++G WK T K   I+++  L G KK+L FY RG   K   T W
Sbjct:    71 CPRDRKYPNGHRSNRATDSGYWKATGKDRSIKSKKTLIGMKKTLVFY-RGRAPKGERTNW 129

Query:   125 GMHEYH--VKD-DPSY--EKEFVLCRIFRRRNKKKRGISTTDEGESSEQLVSSPQQSPCD 179
              MHEY   +KD D +   +  +VLCR+F + + +  G+ + DE   +     SP  +  D
Sbjct:   130 IMHEYRPTLKDLDGTSPGQSPYVLCRLFHKPDDRVNGVKS-DEAAFTASNKYSPDDTSSD 188

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0005516 "calmodulin binding" evidence=IDA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:0031347 "regulation of defense response" evidence=IMP

GO:0000956 "nuclear-transcribed mRNA catabolic process" evidence=RCA

GO:0006487 "protein N-linked glycosylation" evidence=RCA

GO:0008284 "positive regulation of cell proliferation" evidence=RCA

TAIR|locus:2039600 NTL8 "NTM1-like 8" [Arabidopsis thaliana (taxid:3702)]

 Score = 222 (83.2 bits), Expect = 1.6e-16, P = 1.6e-16
 Identities = 65/196 (33%), Positives = 99/196 (50%)

Query:     9 YKSQPSD-ELILCLLKKKRLDPHFSYGPIKDIGHICSLEPWDLATESETDSEDQTCYFFY 67
             ++  P+D ELI   L++K      S   I ++  I   EPWDL  ES+  SE++  YF  
Sbjct:    18 FRFSPTDVELISYYLRRKIDGDENSVAVIAEV-EIYKFEPWDLPEESKLKSENEWFYFCA 76

Query:    68 KPR-YTKSNDAHRATNAGSWKVTRKVSQIEARNGLTGTKKSLTFYLRGLPRKEAITEWGM 126
             + R Y   + + RAT  G WK T K   +++ N + GTK++L F++   PR E  TEW M
Sbjct:    77 RGRKYPHGSQSRRATQLGYWKATGKERSVKSGNQVVGTKRTLVFHIGRAPRGER-TEWIM 135

Query:   127 HEYHVKDDPSYEKEFVLCRIFRRRNKKKRGISTT--------DEGESSEQL-VSSPQQS- 176
             HEY +   P  +   V+CR+  R+N   R  ST         D+G   ++  +    +S 
Sbjct:   136 HEYCIHGAP--QDALVVCRL--RKNADFRASSTQKMEDGVVQDDGYVGQRGGLEKEDKSY 191

Query:   177 -PCDHSISNGNHSEES 191
                +H I NG+ +E S
Sbjct:   192 YESEHQIPNGDIAESS 207

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0009651 "response to salt stress" evidence=IMP

GO:0009845 "seed germination" evidence=RCA;IMP

GO:0009640 "photomorphogenesis" evidence=RCA

GO:0009793 "embryo development ending in seed dormancy" evidence=RCA

GO:0009909 "regulation of flower development" evidence=RCA

GO:0009933 "meristem structural organization" evidence=RCA

GO:0010162 "seed dormancy process" evidence=RCA

GO:0010182 "sugar mediated signaling pathway" evidence=RCA

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0016114 "terpenoid biosynthetic process" evidence=RCA

GO:0016567 "protein ubiquitination" evidence=RCA

GO:0019915 "lipid storage" evidence=RCA

GO:0050826 "response to freezing" evidence=RCA

TAIR|locus:2089764 NAC057 "NAC domain containing protein 57" [Arabidopsis thaliana (taxid:3702)]

 Score = 205 (77.2 bits), Expect = 3.9e-16, P = 3.9e-16
 Identities = 75/246 (30%), Positives = 112/246 (45%)

Query:     9 YKSQPSDE-LILCLLKKKRLDPHFSYGPIKDIGHICSLEPWDLATESETDSEDQTCYFFY 67
             ++  P+DE L+   LK+K          I ++  +   EPWDLA +S   S D   YFF 
Sbjct:    10 FRFHPTDEELVNYYLKRKINGQEIELDIIPEVD-LYKCEPWDLAEKSFLPSRDPEWYFF- 67

Query:    68 KPR---YTKSNDAHRATNAGSWKVTRKVSQIEARNGLTGTKKSLTFYLRGLPRKEAITEW 124
              PR   Y      +RAT  G WK T K  ++ +++   G KK+L +Y +G   +   T+W
Sbjct:    68 GPRDRKYPNGFRTNRATRGGYWKSTGKDRRVTSQSRAIGMKKTLVYY-KGRAPQGIRTDW 126

Query:   125 GMHEYHVKD----DPS-YEKEFVLCRIFRRRNKKKRGISTTDEGESSEQLVSSPQQSPCD 179
              MHEY + D    DPS  +  + LCR+F     KK GI +  E ES  QL +  Q S   
Sbjct:   127 VMHEYRLDDKDCDDPSSLQDSYALCRVF-----KKNGICS--ELESERQLQTG-QCSFTT 178

Query:   180 HSISNGNHSEESTHTIPQQQLQYHNSISYPRNLNV--QNTFAYPQSITDDSPTQLSPG-- 235
              S+   N +  + +    + +     +S      V      ++ Q ITDD+    S G  
Sbjct:   179 ASMEEINSNNNNNYNNDYETMSPEVGVSSACVEEVVDDKDDSWMQFITDDAWDTSSNGAA 238

Query:   236 -NHSEG 240
               H +G
Sbjct:   239 MGHGQG 244

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: Sb07g021200.1 hypothetical protein (364 aa) (Sorghum bicolor)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	371
pfam02365	130	pfam02365, NAM, No apical meristem (NAM) protein	7e-26

>gnl|CDD|216997 pfam02365, NAM, No apical meristem (NAM) protein

 Score =  100 bits (251), Expect = 7e-26
 Identities = 44/123 (35%), Positives = 64/123 (52%), Gaps = 8/123 (6%)

Query: 13  PSD-ELILCLLKKKRLD-PHFSYGPIKDIGHICSLEPWDLATESETDSEDQTCYFFYKP- 69
           P+D EL++  LK+K L  P      I ++  I   EPWDL  + +    D+  YFF    
Sbjct: 9   PTDEELVVYYLKRKVLGKPLPLLDVIPEVD-IYKFEPWDLP-DGKAKGGDREWYFFSPRD 66

Query: 70  -RYTKSNDAHRATNAGSWKVTRKVSQIEARNG-LTGTKKSLTFYLRGLPRKEAITEWGMH 127
            +Y   +  +RAT +G WK T K   + ++ G + G KK+L FY +G   K   T+W MH
Sbjct: 67  RKYPNGSRTNRATGSGYWKATGKDKPVLSKGGEVVGMKKTLVFY-KGRAPKGEKTDWVMH 125

Query: 128 EYH 130
           EY 
Sbjct: 126 EYR 128

This is a family of no apical meristem (NAM) proteins these are plant development proteins. Mutations in NAM result in the failure to develop a shoot apical meristem in petunia embryos. NAM is indicated as having a role in determining positions of meristems and primordial. One member of this family NAP (NAC-like, activated by AP3/PI) is encoded by the target genes of the AP3/PI transcriptional activators and functions in the transition between growth by cell division and cell expansion in stamens and petals. Length = 130

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	371
PF02365	129	NAM: No apical meristem (NAM) protein; InterPro: I	100.0

>PF02365 NAM: No apical meristem (NAM) protein; InterPro: IPR003441 The NAC domain (for Petunia hybrida (Petunia) NAM and for Arabidopsis ATAF1, ATAF2, and CUC2) is an N-terminal module of ~160 amino acids, which is found in proteins of the NAC family of plant-specific transcriptional regulators (no apical meristem (NAM) proteins) []

Probab=100.00  E-value=1.6e-39  Score=277.27  Aligned_cols=124  Identities=32%  Similarity=0.600  Sum_probs=92.1

Q ss_pred             CCCCceECCc-HHHHHHHHhhhhcCCCCCC-CCccccCCccCCCCCCccccCCCCCCCceEEEee-ccC-CCCCCCCccc
Q 017473            5 MREWYKSQPS-DELILCLLKKKRLDPHFSY-GPIKDIGHICSLEPWDLATESETDSEDQTCYFFY-KPR-YTKSNDAHRA   80 (371)
Q Consensus         5 LPPGfRF~PT-EELV~~YLr~KI~G~plp~-~vI~ev~DVY~~ePWdL~~~~pGk~~d~eWYFFS-R~r-y~~G~R~nRa   80 (371)
                      |||||||+|| +|||.+||++|+.|.+++. ++|.++ |||++|||+|+..  ....+++||||+ +.+ +.+|.|.+|+
T Consensus         1 LP~G~rF~PtD~ELi~~yL~~k~~g~~~~~~~~i~~~-Diy~~~P~~L~~~--~~~~~~~~yFF~~~~~~~~~~~r~~R~   77 (129)
T PF02365_consen    1 LPPGFRFRPTDEELINHYLRPKILGEPLPCEDVIHDV-DIYSAHPWELPAK--FKGGDEEWYFFSPRKKKYPNGGRPNRV   77 (129)
T ss_dssp             --TTEEE---HHHHHHCTHHHHHTT-HHCS-CHSEE---GGGS-GGGCHHH--SSS-SSEEEEEEE----------S-EE
T ss_pred             CCCceEecCChHHHHHHHHHHHhcCCCCCcccceeec-ccCccChHHhhhh--ccCCCceEEEEEecccccCCccccccc
Confidence            8999999999 9999999999999999887 899999 9999999999732  233577999999 655 7789999999


Q ss_pred             CCCceeeeeCCceeEee-CCceEEEEEEEeeeccCCCCCCCCcCeEEEEEEeC
Q 017473           81 TNAGSWKVTRKVSQIEA-RNGLTGTKKSLTFYLRGLPRKEAITEWGMHEYHVK  132 (371)
Q Consensus        81 tg~G~WKatG~dK~I~~-~g~vVG~KKtLvFY~gr~~r~p~KT~WvMhEYrL~  132 (371)
                      +++|+||++|++++|.+ +|.+||+|++|+||.++.+ .+.+|+|+||||+|.
T Consensus        78 ~~~G~Wk~~g~~~~i~~~~g~~iG~k~~l~f~~~~~~-~~~kt~W~M~EY~L~  129 (129)
T PF02365_consen   78 TGGGYWKSTGKEKPIKDPGGKVIGFKKTLVFYSGKSP-NGKKTGWVMHEYSLE  129 (129)
T ss_dssp             ETTEEEEEECEEEEEEE-TTCEEEEEEEEEEEESSTT-S-EEEEEEEEEEEE-
T ss_pred             ccceEEeecccccccccccceeeeeEEEEEEEeccCC-CCCcCCeEEEEEEeC
Confidence            99999999999999999 8999999999999987521 344999999999984

NAC proteins are involved in developmental processes, including formation of the shoot apical meristem, floral organs and lateral shoots, as well as in plant hormonal control and defence. The NAC domain is accompanied by diverse C-terminal transcriptional activation domains. The NAC domain has been shown to be a DNA-binding domain (DBD) and a dimerization domain [,]. The NAC domain can be subdivided into five subdomains (A-E). Each subdomain is distinguishable by blocks of heterogeneous amino acids or gaps. While the NAC domains were rich in basic amino acids (R, K and H) as a whole, the distribution of positive and negative amino acids in each subdomain were unequal. Subdomains C and D are rich in basic amino acids but poor in acidic amino acids, while subdomain B contains a high proportion of acidic amino acids. Putative nuclear localization signals (NLS) have been detected in subdomains C and D []. The DBD is contained within a 60 amino acid region located within subdomains D and E []. The overall structure of the NAC domain monomer consists of a very twisted antiparallel beta-sheet, which packs against an N-terminal alpha-helix on one side and one shorter helix on the other side surrounded by a few helical elements. The structure suggests that the NAC domain mediates dimerization through conserved interactions including a salt bridge, and DNA binding through the NAC dimer face rich in positive charges [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1UT4_A 3SWM_B 4DUL_B 3SWP_D 1UT7_B 3ULX_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	371
1ut4_A	171	Structure Of The Conserved Domain Of Anac, A Member		7e-09
3swm_A	174	The Nac Domain Of Anac019 In Complex With Dna, Gold		9e-09
3ulx_A	174	Crystal Structural Of The Conserved Domain Of Rice		2e-07

>pdb|1UT4|A Chain A, Structure Of The Conserved Domain Of Anac, A Member Of The Nac Family Of Transcription Factors Length = 171

Iteration: 1
 Score = 58.2 bits (139), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 76/156 (48%), Gaps = 14/156 (8%)
Query: 9   YKSQPSDE-LILCLLKKKRLDPHFSYGPIKDIGHICSLEPWDLATESETDSEDQTCYFFY 67
           ++  P+DE L++  L +K     FS   I +I  +   +PW L  ++    ++   ++F+
Sbjct: 21  FRFYPTDEELMVQYLCRKAAGYDFSLQLIAEI-DLYKFDPWVLPNKALFGEKE---WYFF 76
Query: 68  KPR---YTKSNDAHRATNAGSWKVTRKVSQIEARNGLTGTKKSLTFYLRGLPRKEAITEW 124
            PR   Y   +  +R   +G WK T     I       G KK+L FY+   P K   T W
Sbjct: 77  SPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAP-KGTKTNW 135
Query: 125 GMHEYHV-----KDDPSYEKEFVLCRIFRRRNKKKR 155
            MHEY +     ++  +   ++VLCRI+++++  ++
Sbjct: 136 IMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQSSAQK 171

>pdb|3SWM|A Chain A, The Nac Domain Of Anac019 In Complex With Dna, Gold Derivative Length = 174

Iteration: 1
 Score = 57.8 bits (138), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 76/156 (48%), Gaps = 14/156 (8%)
Query: 9   YKSQPSDE-LILCLLKKKRLDPHFSYGPIKDIGHICSLEPWDLATESETDSEDQTCYFFY 67
           ++  P+DE L++  L +K     FS   I +I  +   +PW L  ++    ++   ++F+
Sbjct: 24  FRFYPTDEELMVQYLCRKAAGYDFSLQLIAEI-DLYKFDPWVLPNKALFGEKE---WYFF 79
Query: 68  KPR---YTKSNDAHRATNAGSWKVTRKVSQIEARNGLTGTKKSLTFYLRGLPRKEAITEW 124
            PR   Y   +  +R   +G WK T     I       G KK+L FY+   P K   T W
Sbjct: 80  SPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAP-KGTKTNW 138
Query: 125 GMHEYHV-----KDDPSYEKEFVLCRIFRRRNKKKR 155
            MHEY +     ++  +   ++VLCRI+++++  ++
Sbjct: 139 IMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQSSAQK 174

>pdb|3ULX|A Chain A, Crystal Structural Of The Conserved Domain Of Rice Stress-Responsive Nac1 Length = 174

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 66/152 (43%), Gaps = 18/152 (11%)
Query: 14  SDELILCLLKKKRLDPHFSYGPIKDIGHICSLEPWDLATESETDSEDQTCYFFYKPR--- 70
            DEL+   L +K          I ++  +   +PWDL   +   + +   ++F+ PR   
Sbjct: 25  DDELVEHYLCRKAAGQRLPVPIIAEV-DLYKFDPWDLPERALFGARE---WYFFTPRDRK 80
Query: 71  YTKSNDAHRATNAGSWKVTRKVSQIEARNGLTGTKKSLTFYLRGLPRKEAITEWGMHEYH 130
           Y   +  +RA   G WK T     +  R    G KK+L FY    PR    T+W MHEY 
Sbjct: 81  YPNGSRPNRAAGNGYWKATGADKPVAPRGRTLGIKKALVFYAGKAPRG-VKTDWIMHEYR 139
Query: 131 VKDDPSYEK----------EFVLCRIFRRRNK 152
           + D                ++VLCR++ ++N+
Sbjct: 140 LADAGRAAAGAKKGSLRLDDWVLCRLYNKKNE 171

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	371
1ut7_A	171	No apical meristem protein; transcription regulati	3e-32
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	4e-31
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A Length = 171

 Score =  118 bits (297), Expect = 3e-32
 Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 14/152 (9%)

Query: 13  PSD-ELILCLLKKKRLDPHFSYGPIKDIGHICSLEPWDLATESETDSEDQTCYFFYKPR- 70
           P+D EL++  L +K     FS   I +I  +   +PW L  ++     ++  YFF  PR 
Sbjct: 25  PTDEELMVQYLCRKAAGYDFSLQLIAEI-DLYKFDPWVLPNKAL--FGEKEWYFFS-PRD 80

Query: 71  --YTKSNDAHRATNAGSWKVTRKVSQIEARNGLTGTKKSLTFYLRGLPRKEAITEWGMHE 128
             Y   +  +R   +G WK T     I       G KK+L FY  G   K   T W MHE
Sbjct: 81  RKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFY-IGKAPKGTKTNWIMHE 139

Query: 129 YHVKDD-----PSYEKEFVLCRIFRRRNKKKR 155
           Y + +       +   ++VLCRI+++++  ++
Sbjct: 140 YRLIEPSRRNGSTKLDDWVLCRIYKKQSSAQK 171

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} Length = 174

 Score =  115 bits (290), Expect = 4e-31
 Identities = 43/157 (27%), Positives = 69/157 (43%), Gaps = 19/157 (12%)

Query: 13  PSD-ELILCLLKKKRLDPHFSYGPIKDIGHICSLEPWDLATESETDSEDQTCYFFYKPR- 70
           P+D EL+   L +K          I ++  +   +PWDL   +   + +   YFF  PR 
Sbjct: 23  PTDDELVEHYLCRKAAGQRLPVPIIAEV-DLYKFDPWDLPERALFGARE--WYFFT-PRD 78

Query: 71  --YTKSNDAHRATNAGSWKVTRKVSQIEARNGLTGTKKSLTFYLRGLPRKEAITEWGMHE 128
             Y   +  +RA   G WK T     +  R    G KK+L FY  G   +   T+W MHE
Sbjct: 79  RKYPNGSRPNRAAGNGYWKATGADKPVAPRGRTLGIKKALVFY-AGKAPRGVKTDWIMHE 137

Query: 129 YHVKDDPSYEK----------EFVLCRIFRRRNKKKR 155
           Y + D                ++VLCR++ ++N+ ++
Sbjct: 138 YRLADAGRAAAGAKKGSLRLDDWVLCRLYNKKNEWEK 174

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.8 bits (97), Expect = 3e-04
 Identities = 65/445 (14%), Positives = 127/445 (28%), Gaps = 131/445 (29%)

Query: 8   W--YKSQPSDELILCLLKK--KRLDPHFSYGPIKDIGHICSLEPWDLATESETDS-EDQT 62
           W   K+  S E +L +L+K   ++DP++            S        +    S + + 
Sbjct: 186 WLNLKNCNSPETVLEMLQKLLYQIDPNW-----------TSRSDHSSNIKLRIHSIQAEL 234

Query: 63  CYFFYKPRYTKS-------NDAH--RATNAGSWKV---TRKVSQIEARNGLTGTKKSLTF 110
                   Y           +A    A N    K+   TR     +  +  T T  SL  
Sbjct: 235 RRLLKSKPYENCLLVLLNVQNAKAWNAFNLSC-KILLTTRFKQVTDFLSAATTTHISLDH 293

Query: 111 YLRG--------------------LPR-----------------KEAITEWGMHEYHVKD 133
           +                       LPR                 ++ +  W   ++   D
Sbjct: 294 HSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCD 353

Query: 134 -------------DPSYEKE-FVLCRIFRRRNKKKRGISTT--------DEGESSEQLVS 171
                        +P+  ++ F    +F         I T                 +V 
Sbjct: 354 KLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAH----IPTILLSLIWFDVIKSDVMVVV- 408

Query: 172 SPQQSPCDHSISNGNHSEESTHTIPQQQLQYHNSISYPRNLNVQNTFAYPQSITDDSPTQ 231
                   +S+      +EST +IP   L+    +     L+      Y    T D    
Sbjct: 409 ---NKLHKYSLVEK-QPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFD-SDD 463

Query: 232 LSPGNHSEGTTHTYPQQLPNHNSISYTGNRIE--QNMYL--------LKYLPNYSPAQQL 281
           L P  + +   +++   + +H        R+   + ++L        +++      A   
Sbjct: 464 LIP-PYLDQYFYSH---IGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGS 519

Query: 282 PCDHFISARNYSEEYVPINQQPQPNDNLISHLGSQIEGFSP---TNSLLPQNSNLEWQLP 338
             +     + Y + Y+        ND     L + I  F P    N +  + ++L  ++ 
Sbjct: 520 ILNTLQQLKFY-KPYI------CDNDPKYERLVNAILDFLPKIEENLICSKYTDL-LRIA 571

Query: 339 LHHPLE-IHNSAENPFRKDVSQLEK 362
           L    E I   A         Q+++
Sbjct: 572 LMAEDEAIFEEAH-------KQVQR 589

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	371
1ut7_A	171	No apical meristem protein; transcription regulati	100.0
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	100.0

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A

Probab=100.00  E-value=7.6e-51  Score=366.11  Aligned_cols=147  Identities=29%  Similarity=0.575  Sum_probs=123.6

Q ss_pred             CCCCCCceECCc-HHHHHHHHhhhhcCCCCCCCCccccCCccCCCCCCccccCCCCCCCceEEEee-ccC-CCCCCCCcc
Q 017473            3 SHMREWYKSQPS-DELILCLLKKKRLDPHFSYGPIKDIGHICSLEPWDLATESETDSEDQTCYFFY-KPR-YTKSNDAHR   79 (371)
Q Consensus         3 ~~LPPGfRF~PT-EELV~~YLr~KI~G~plp~~vI~ev~DVY~~ePWdL~~~~pGk~~d~eWYFFS-R~r-y~~G~R~nR   79 (371)
                      ..|||||||+|| ||||.+||++|+.|.+++.++|.++ |||++|||+|+...  ...+++||||+ |++ |++|.|++|
T Consensus        15 ~~lPpGfRF~PTDeELv~~YL~~K~~g~~~~~~~I~e~-Diy~~~Pw~Lp~~~--~~g~~ewyFFs~r~~k~~~g~R~~R   91 (171)
T 1ut7_A           15 LSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEI-DLYKFDPWVLPNKA--LFGEKEWYFFSPRDRKYPNGSRPNR   91 (171)
T ss_dssp             SCCCTTEEECCCHHHHHHHTHHHHHTTCCCSSCCSEEC-CGGGSCGGGHHHHS--SSCSSEEEEEEECCC-------CCE
T ss_pred             cCCCCcceeCCChHHHHHHHHHHHhcCCCCCCCeEeec-ccccCChhHhhchh--hcCCccEEEEeccccccCCCCcccc
Confidence            579999999999 9999999999999999999999999 99999999997653  23478999999 777 999999999


Q ss_pred             cCCCceeeeeCCceeEeeCCceEEEEEEEeeeccCCCCCCCCcCeEEEEEEeCCCCC-----CCCCeEEEEEEEccCCC
Q 017473           80 ATNAGSWKVTRKVSQIEARNGLTGTKKSLTFYLRGLPRKEAITEWGMHEYHVKDDPS-----YEKEFVLCRIFRRRNKK  153 (371)
Q Consensus        80 atg~G~WKatG~dK~I~~~g~vVG~KKtLvFY~gr~~r~p~KT~WvMhEYrL~~~~~-----~~~d~VLCRIykK~~~~  153 (371)
                      +|++||||+||++++|..++.+||+||+|+||.|+.+ .+.||+|+||||+|.....     ..++|||||||+|+...
T Consensus        92 ~t~~G~Wk~tG~~k~I~~~~~~vG~KktLvFy~g~~p-~g~kT~WvMhEY~l~~~~~~~~~~~~~~~VlCrv~~k~~~~  169 (171)
T 1ut7_A           92 VAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAP-KGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQSSA  169 (171)
T ss_dssp             EETTEEEEEEEEEEEEEETTEEEEEEEEEEEEESSTT-SCEEEEEEEEEEEECCCC--------CCEEEEEEEECC---
T ss_pred             cCCCCEEeccCCCceEEecCcEEEEEEEEEEEcCcCC-CCCcCCeEEEEEEcCCCccccCcccCCCEEEEEEEEcCCCC
Confidence            9999999999999999998999999999999999832 3349999999999998752     36899999999988654

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} SCOP: b.143.1.1

Probab=100.00  E-value=7.7e-51  Score=367.32  Aligned_cols=145  Identities=29%  Similarity=0.597  Sum_probs=126.0

Q ss_pred             CCCCCCceECCc-HHHHHHHHhhhhcCCCCCCCCccccCCccCCCCCCccccCCCCCCCceEEEee-ccC-CCCCCCCcc
Q 017473            3 SHMREWYKSQPS-DELILCLLKKKRLDPHFSYGPIKDIGHICSLEPWDLATESETDSEDQTCYFFY-KPR-YTKSNDAHR   79 (371)
Q Consensus         3 ~~LPPGfRF~PT-EELV~~YLr~KI~G~plp~~vI~ev~DVY~~ePWdL~~~~pGk~~d~eWYFFS-R~r-y~~G~R~nR   79 (371)
                      ..|||||||+|| ||||.+||++|+.|.+++..+|.++ |||++|||+|+....  ..+++||||+ |++ |++|.|.+|
T Consensus        13 ~~LPpGfRF~PTDeELV~~YL~~K~~g~~~~~~~I~ev-Dvy~~~Pw~Lp~~~~--~g~~ewYFFs~r~~ky~~g~R~nR   89 (174)
T 3ulx_A           13 LNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEV-DLYKFDPWDLPERAL--FGAREWYFFTPRDRKYPNGSRPNR   89 (174)
T ss_dssp             TTCCTTCCCCCCHHHHHHHTHHHHHHTCCCSSSCCEEC-CGGGSCGGGSGGGCS--SCSSEEEEEEECCC-----CCSCE
T ss_pred             cCCCCcceeCCCHHHHHHHHHHHHhcCCCCCcCeeeec-ccccCCchhhhhhhc--cCCceEEEEeccccccCCCCCcee
Confidence            479999999999 9999999999999999999999999 999999999976532  2368999999 877 999999999


Q ss_pred             cCCCceeeeeCCceeEeeCCceEEEEEEEeeeccCCCCCCCCcCeEEEEEEeCCCCC----------CCCCeEEEEEEEc
Q 017473           80 ATNAGSWKVTRKVSQIEARNGLTGTKKSLTFYLRGLPRKEAITEWGMHEYHVKDDPS----------YEKEFVLCRIFRR  149 (371)
Q Consensus        80 atg~G~WKatG~dK~I~~~g~vVG~KKtLvFY~gr~~r~p~KT~WvMhEYrL~~~~~----------~~~d~VLCRIykK  149 (371)
                      +|++||||+||++++|..+|.+||+||+|+||.|+.+ .+.||+|+||||+|.....          ..++|||||||+|
T Consensus        90 ~t~~G~WkatG~dk~I~~~g~~vG~KktLvFy~g~~p-~g~kT~WvMhEY~L~~~~~~~~~~~~~~~~~~~wVlCrvf~K  168 (174)
T 3ulx_A           90 AAGNGYWKATGADKPVAPRGRTLGIKKALVFYAGKAP-RGVKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNK  168 (174)
T ss_dssp             EETTEEEEECSCCEEECCSSSCCEEEEEEEEEESSTT-SCEEEEEEEEEEEECSCC-----------CCSSEEEEEEEES
T ss_pred             ecCCceEccCCCCcEEeeCCcEEEEEEEEEEecCCCC-CCCcCCeEEEEEEeCCCCCcccccccCCCCCCCEEEEEEEEc
Confidence            9999999999999999998999999999999999832 3349999999999998642          2579999999998


Q ss_pred             cC
Q 017473          150 RN  151 (371)
Q Consensus       150 ~~  151 (371)
                      +.
T Consensus       169 ~~  170 (174)
T 3ulx_A          169 KN  170 (174)
T ss_dssp             CC
T ss_pred             CC
Confidence            75

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	371
d1ut7a_	166	b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mou	1e-24

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 166

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 96.2 bits (239), Expect = 1e-24
 Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 8/148 (5%)

Query: 9   YKSQPSD-ELILCLLKKKRLDPHFSYGPIKDIGHICSLEPWDLATESETDSEDQTCYFFY 67
           ++  P+D EL++  L +K     FS   I +I  +   +PW L  ++    ++   +   
Sbjct: 21  FRFYPTDEELMVQYLCRKAAGYDFSLQLIAEI-DLYKFDPWVLPNKALFGEKEWYFFSPR 79

Query: 68  KPRYTKSNDAHRATNAGSWKVTRKVSQIEARNGLTGTKKSLTFYLRGLPRKEAITEWGMH 127
             +Y   +  +R   +G WK T     I       G KK+L FY  G   K   T W MH
Sbjct: 80  DRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFY-IGKAPKGTKTNWIMH 138

Query: 128 EYHVKDD-----PSYEKEFVLCRIFRRR 150
           EY + +       +   ++VLCRI++++
Sbjct: 139 EYRLIEPSRRNGSTKLDDWVLCRIYKKQ 166

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	371
d1ut7a_	166	No apical meristem (NAM, ANAC) {Mouse-ear cress (A	100.0

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.5e-48  Score=345.30  Aligned_cols=145  Identities=29%  Similarity=0.586  Sum_probs=122.7

Q ss_pred             CCCCCCCceECCc-HHHHHHHHhhhhcCCCCCCCCccccCCccCCCCCCccccCCCCCCCceEEEee-ccC-CCCCCCCc
Q 017473            2 ESHMREWYKSQPS-DELILCLLKKKRLDPHFSYGPIKDIGHICSLEPWDLATESETDSEDQTCYFFY-KPR-YTKSNDAH   78 (371)
Q Consensus         2 e~~LPPGfRF~PT-EELV~~YLr~KI~G~plp~~vI~ev~DVY~~ePWdL~~~~pGk~~d~eWYFFS-R~r-y~~G~R~n   78 (371)
                      +.+|||||||+|| ||||.+||++|+.|.+++.++|+++ |||++|||+|+...  ...+++||||+ |.+ +++|.|.+
T Consensus        14 ~l~LPpG~RF~PTDeELv~~YL~~Ki~g~~l~~~~I~~~-Dvy~~~Pw~Lp~~~--~~~~~~wyFft~~~~k~~~g~r~~   90 (166)
T d1ut7a_          14 QLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEI-DLYKFDPWVLPNKA--LFGEKEWYFFSPRDRKYPNGSRPN   90 (166)
T ss_dssp             SSCCCTTEEECCCHHHHHHHTHHHHHTTCCCSSCCSEEC-CGGGSCGGGHHHHS--SSCSSEEEEEEECCC-------CC
T ss_pred             cccCCCccccCCCcHHHHHHHHHHHHcCCCCCcccceec-cCCcCChhhccchh--ccCcceEEEEeeeccccCCCCccc
Confidence            4579999999999 9999999999999999999999999 99999999997642  23478899999 776 89999999


Q ss_pred             ccCCCceeeeeCCceeEeeCCceEEEEEEEeeeccCCCCCCCCcCeEEEEEEeCCCCCC-----CCCeEEEEEEEcc
Q 017473           79 RATNAGSWKVTRKVSQIEARNGLTGTKKSLTFYLRGLPRKEAITEWGMHEYHVKDDPSY-----EKEFVLCRIFRRR  150 (371)
Q Consensus        79 Ratg~G~WKatG~dK~I~~~g~vVG~KKtLvFY~gr~~r~p~KT~WvMhEYrL~~~~~~-----~~d~VLCRIykK~  150 (371)
                      |++++|+||++|+++.|.++|.+||+||+|+||+++.+ .+.+|+|+||||+|.+....     .++|||||||+|+
T Consensus        91 R~~g~G~Wk~~g~~~~i~~~g~~vG~kk~l~fy~~~~~-~~~~t~W~M~EY~l~~~~~~~~~~~~~~~VLCrI~~Kk  166 (166)
T d1ut7a_          91 RVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAP-KGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQ  166 (166)
T ss_dssp             EEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEESSTT-SCEEEEEEEEEEEECCCC--------CCEEEEEEEECC
T ss_pred             cccCCCEecccCCCceEecCCcEEEEEEEEEEEecCCC-CCCccCeEEEEEecCCcccccCccccCCEEEEEEEecC
Confidence            99999999999999999999999999999999999832 33499999999999886532     5789999999974