Citrus Sinensis ID: 017506

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370
Protein Sequence
MLLLPHFSTKPHLLFSSLSSSSSSLRPRLPKFPFYPAYFTKSPSCPSIACHVSTTGGGGAAQMESSASVDSVTHDLKNQRLDTETETDGGDESKMTKKLKALEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRFGSYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNKSESLSFSTGDEDHSVVDLTSNKYAGNSFR
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccEEEEcccccccccEEEEEcHHHHHHcccccccccccccccccccccccccccccHHHHccccccccccccccccEEEEcEEEcccccEEEEEEEccccccccccccccccHHHHHHHHHHHHHHHHcccccccccEEEEcccEEEEcccccccccccccEEEEEEEcccEEEcHHHHHHHcccccHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccEEEEccccccHccccccccccccccccccccccccccEEEEccccccccccccccHHHHHHHHHHHcccccccccccccHHHccHcHHHHHccccccHHHHHccccccccccccccccccEEEccccccccccEEEEEcHHHHHHccccHHHHccHHHHHHHcccccccccccHHEHEccccccccccccccccEEEEEEEEcccccEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEccccEEHHHEccccccccccEEEEEEcccEEEEccEEEEcccccccHHHHHHHHHHHHHHHcHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccccc
Coil and Loop (DISEMBL)
mlllphfstkphllfsslsssssslrprlpkfpfypayftkspscpsiachvsttggggaaqmessasvdsvthdlknqrldtetetdggdeskmTKKLKALEdlnwdhsfvrelpgdprtdsipreVLHACytkvspsaevenpqlvAWSESVAdsleldpkeferpdfplffsgatplagavpyaqcygghqfgmwagqlgdgraITLGEILNLKSERWELQlkgagktpysrfADGLAVLRSSIREFLCSEamhflgiptTRALCLVTtgkfvtrdmfydgnpkeepgaIVCRVAQSFLrfgsyqihasrgqedLDIVRTLADYAIRHHFRhienmnkseslsfstgdedhsvvdltsnkyagnsfr
Flexible Loop (DISEMBL)
mlllphfstkphlLFSSlsssssslrpRLPKFPFYPAYFTKSPSCPSIACHVSTTGGGGAAQMESSASVDsvthdlknqrldtetetdggdeskmtKKLKAledlnwdhsfvrelpgdprtdsiprEVLHACYTKVspsaevenpqlVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLkgagktpysrFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRFGSYQIhasrgqedldIVRTLADYAIRHHFRHIENMNKSESLSfstgdedhsvvdltsnkyagnsfr
Low Complexity Region (SEG)
MLLLPHFSTKPHllfsslsssssslRPRLPKFPFYPAYFTKSPSCPSIACHVSTTGGGGAAQMESSASVDSVTHDLKNQRLDTETETDGGDESKMTKKLKALEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRFGSYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNKSESLSFSTGDEDHSVVDLTSNKYAGNSFR
Disordered region (IsUnstruct)
******************************KFPFYPAYFTKSPSCPSIACHV****************************************************LNWDHSFVR************REVLHACYTKV*********QLVAWS*************FERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRFGSYQIHASRGQEDLDIVRTLADYAIRHHFRHIE*********************************
Disordered Region (DISOPRED)
*******STKPHLLFSSLSSSSSSLRPRLPKFPFYPAYFTKSPSCPSIACHVST***********************************************LEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRFGSYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNKSESLSFSTGDEDHSVVDLTSNKYAGNSFR
Disordered Region (DISEMBL)
MLLLPHFSTKPHLLFSS********RPRLPKFPFYPAYFTKSPSCPSIACHVST*******************HDLKNQR*************KMTKKLKALEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRFGSYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNKSESLSFSTGDEDHSVVDLTSNKYAGNSFR
Disordered Region (DISPRO)
*LLLPHFSTKPHLLFSSL***SSSLRPRLPKFPFYPAYFTKSPSCPSIACHVST**************************************S*MTKKLKALEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRFGSYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNKSESLSFSTGDEDHSVVDLTSNKYAGNSFR
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLLLPHFSTKPHLLFSSLSSSSSSLRPRLPKFPFYPAYFTKSPSCPSIACHVSTTGGGGAAQMESSASVDSVTHDLKNQRLDTETETDGGDESKMTKKLKALEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRFGSYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNKSESLSFSTGDEDHSVVDLTSNKYAGNSFR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	370	2.2.26 [Sep-21-2011]
A1K5T6	519	UPF0061 protein azo1574 O	yes	no	0.629	0.448	0.614	9e-75
Q5NYD9	523	UPF0061 protein AZOSEA380	yes	no	0.618	0.437	0.593	2e-73
Q2Y8V8	565	UPF0061 protein Nmul_A151	yes	no	0.613	0.401	0.579	1e-71
C1AED7	522	UPF0061 protein GAU_3822	yes	no	0.629	0.446	0.567	2e-70
C4LAV8	519	UPF0061 protein Tola_0683	yes	no	0.616	0.439	0.590	3e-70
Q1H0D2	518	UPF0061 protein Mfla_1788	yes	no	0.645	0.461	0.557	8e-70
Q7UKT5	540	UPF0061 protein RB9953 OS	yes	no	0.621	0.425	0.557	2e-68
Q8P8F8	518	UPF0061 protein XCC2284 O	yes	no	0.608	0.434	0.567	9e-66
Q4UVM9	518	UPF0061 protein XC_1831 O	yes	no	0.608	0.434	0.567	9e-66
B0RS12	518	UPF0061 protein xcc-b100_	yes	no	0.608	0.434	0.563	1e-65

>sp|A1K5T6|Y1574_AZOSB UPF0061 protein azo1574 OS=Azoarcus sp. (strain BH72) GN=azo1574 PE=3 SV=1

 Score =  280 bits (717), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 145/236 (61%), Positives = 169/236 (71%), Gaps = 3/236 (1%)

Query: 102 LEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELD 161
           +  L +D+ FVRELP DP T    R+V  A Y++V+P+  V  P LVA S  VA  L  D
Sbjct: 1   MRPLVFDNRFVRELPADPETGPHTRQVAGASYSRVNPT-PVAAPHLVAHSAEVAALLGWD 59

Query: 162 PKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERW 221
             +   P+F   F G   L G  PYA CYGGHQFG WAGQLGDGRAITLGE+LN +  RW
Sbjct: 60  ESDIASPEFAEVFGGNRLLDGMEPYAACYGGHQFGNWAGQLGDGRAITLGEVLNGQGGRW 119

Query: 222 ELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMF 281
           ELQLKGAG TPYSR ADG AVLRSSIREFLCSEAMH LG+PTTRAL LV TG+ V RDMF
Sbjct: 120 ELQLKGAGPTPYSRRADGRAVLRSSIREFLCSEAMHHLGVPTTRALSLVGTGEKVVRDMF 179

Query: 282 YDGNPKEEPGAIVCRVAQSFLRFGSYQIHASRGQEDLDIVRTLADYAIRHHFRHIE 337
           YDGNP+ EPGAIVCRVA SF+RFG++++ A+RG  DLD++  L D+ I   F  IE
Sbjct: 180 YDGNPQAEPGAIVCRVAPSFIRFGNFELLAARG--DLDLLNRLIDFTIARDFPGIE 233

Azoarcus sp. (strain BH72) (taxid: 62928)

>sp|Q5NYD9|Y3800_AROAE UPF0061 protein AZOSEA38000 OS=Aromatoleum aromaticum (strain EbN1) GN=AZOSEA38000 PE=3 SV=1

 Score =  276 bits (705), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 140/236 (59%), Positives = 165/236 (69%), Gaps = 7/236 (2%)

Query: 102 LEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELD 161
           +++L  D+ FV ELPGDP      R+V  ACY++V P+  V  P L+AWS  VA  L  D
Sbjct: 1   MKNLVLDNRFVHELPGDPNPSPDVRQVHGACYSRVMPTP-VSAPHLIAWSPEVAALLGFD 59

Query: 162 PKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSE-- 219
             +   P+F   F+G   + G  PYA CYGGHQFG WAGQLGDGRAITLGE +  + +  
Sbjct: 60  ESDVRSPEFAAVFAGNALMPGMEPYAACYGGHQFGNWAGQLGDGRAITLGEAVTTRGDGH 119

Query: 220 --RWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVT 277
             RWELQLKGAG TPYSR ADG AVLRSSIREFLCSEAMH LG+PTTRALCLV TG+ V 
Sbjct: 120 TGRWELQLKGAGPTPYSRHADGRAVLRSSIREFLCSEAMHHLGVPTTRALCLVGTGEKVV 179

Query: 278 RDMFYDGNPKEEPGAIVCRVAQSFLRFGSYQIHASRGQEDLDIVRTLADYAIRHHF 333
           RDMFYDG PK EPGA+VCRVA SF+RFG+++I  SRG E L  +  L D+ I   F
Sbjct: 180 RDMFYDGRPKAEPGAVVCRVAPSFIRFGNFEIFTSRGDEAL--LTRLVDFTIARDF 233

Aromatoleum aromaticum (strain EbN1) (taxid: 76114)

>sp|Q2Y8V8|Y1510_NITMU UPF0061 protein Nmul_A1510 OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=Nmul_A1510 PE=3 SV=1

 Score =  270 bits (690), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 139/240 (57%), Positives = 177/240 (73%), Gaps = 13/240 (5%)

Query: 99  LKALEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSL 158
           L  L D  +D+ FVR+LPGDP T ++PR+V +A YT+VSP+  V +P+L+AW++ V + L
Sbjct: 15  LPDLFDARFDNRFVRQLPGDPETRNVPRQVRNAGYTQVSPTP-VRSPRLLAWADEVGEML 73

Query: 159 ELDPKEFERPDFPL-----FFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEI 213
            +      RP  P+       +G   L    PYA  YGGHQFG WAGQLGDGRAITLGE+
Sbjct: 74  GI-----ARPASPVSPAVEVLAGNRILPSMQPYAARYGGHQFGHWAGQLGDGRAITLGEL 128

Query: 214 LNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTG 273
           ++   +R+ELQLKGAGKTPYSR ADG AVLRSS+REFLCSEAMH LG+PTTRAL LV TG
Sbjct: 129 ISPNDKRYELQLKGAGKTPYSRTADGRAVLRSSVREFLCSEAMHSLGVPTTRALSLVATG 188

Query: 274 KFVTRDMFYDGNPKEEPGAIVCRVAQSFLRFGSYQIHASRGQEDLDIVRTLADYAIRHHF 333
           + V RDMFYDG+P  EPGAIVCRV+ SFLRFG+++I A+  Q++ +++R LAD+ I  HF
Sbjct: 189 EAVIRDMFYDGHPGAEPGAIVCRVSPSFLRFGNFEILAA--QKEPELLRQLADFVIGEHF 246

Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) (taxid: 323848)

>sp|C1AED7|Y3822_GEMAT UPF0061 protein GAU_3822 OS=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) GN=GAU_3822 PE=3 SV=1

 Score =  266 bits (681), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 134/236 (56%), Positives = 165/236 (69%), Gaps = 3/236 (1%)

Query: 102 LEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELD 161
           ++ L +D+ FV ELPGDP   +  R+VL A ++ V P+  V  PQL+A +  VA  L   
Sbjct: 1   MQTLRFDNRFVDELPGDPDPRNQRRQVLGAAWSAVQPT-PVTAPQLLAVAPDVAAMLGFS 59

Query: 162 PKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERW 221
           P++   P+F   F G   L G  P+A CYGGHQFG WAGQLGDGRAI+LGE++    +RW
Sbjct: 60  PEQTASPEFAAVFGGNALLEGMRPWAACYGGHQFGQWAGQLGDGRAISLGELVTTAGDRW 119

Query: 222 ELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMF 281
           ELQLKGAG TPYSR ADG AVLRSSIREFLCSEAMH LG+PTTRAL LVTTG  V RD+ 
Sbjct: 120 ELQLKGAGPTPYSRTADGRAVLRSSIREFLCSEAMHHLGVPTTRALSLVTTGDPVVRDVL 179

Query: 282 YDGNPKEEPGAIVCRVAQSFLRFGSYQIHASRGQEDLDIVRTLADYAIRHHFRHIE 337
           Y+GNP  EPGA+VCRVA SF+RFG+++I  +R   DL  +  L D+ I   F HI+
Sbjct: 180 YNGNPAPEPGAVVCRVAPSFVRFGNFEIFTAR--HDLTTLAQLVDFTIARDFPHID 233

Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) (taxid: 379066)

>sp|C4LAV8|Y683_TOLAT UPF0061 protein Tola_0683 OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=Tola_0683 PE=3 SV=1

 Score =  266 bits (679), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 137/232 (59%), Positives = 168/232 (72%), Gaps = 4/232 (1%)

Query: 105 LNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKE 164
           L++D+ F+RELPGDP T + PR+V  A ++ V+P A V  PQL+A S  VA  L +   E
Sbjct: 4   LHFDNRFIRELPGDPLTLNQPRQVHAAFWSAVTP-APVPQPQLIASSAEVAALLGISLAE 62

Query: 165 FERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQ 224
            ++P +    SG   L G  P+A CYGGHQFG WAGQLGDGRAI+LGE+++    RWELQ
Sbjct: 63  LQQPAWVAALSGNGLLDGMSPFATCYGGHQFGNWAGQLGDGRAISLGELIH-NDLRWELQ 121

Query: 225 LKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDG 284
           LKGAG TPYSR  DG AVLRSSIREFLCSEAM  LG+PTTRAL LV TG+ + RDMFYDG
Sbjct: 122 LKGAGVTPYSRRGDGKAVLRSSIREFLCSEAMFHLGVPTTRALSLVLTGEQIWRDMFYDG 181

Query: 285 NPKEEPGAIVCRVAQSFLRFGSYQIHASRGQEDLDIVRTLADYAIRHHFRHI 336
           NP++EPGAIVCRVA SF+RFG +Q+ A RG+ DL  +  L D+ I   F H+
Sbjct: 182 NPQQEPGAIVCRVAPSFIRFGHFQLPAMRGESDL--LNQLIDFTIDRDFPHL 231

Tolumonas auensis (strain DSM 9187 / TA4) (taxid: 595494)

>sp|Q1H0D2|Y1788_METFK UPF0061 protein Mfla_1788 OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=Mfla_1788 PE=3 SV=1

 Score =  264 bits (675), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 135/242 (55%), Positives = 176/242 (72%), Gaps = 3/242 (1%)

Query: 105 LNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKE 164
           L +D+ F+RELPGDP T +  R+V  AC+++V P++ V +P+L+A+S  + ++LEL  +E
Sbjct: 2   LTFDNRFLRELPGDPETSNQLRQVYGACWSRVMPTS-VSSPKLLAYSHEMLEALELSEEE 60

Query: 165 FERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQ 224
              P +    +G   + G  PYA CYGGHQFG WAGQLGDGRAI+LGE++N + +RWELQ
Sbjct: 61  IRSPAWVDALAGNGLMPGMEPYAACYGGHQFGHWAGQLGDGRAISLGEVVNRQGQRWELQ 120

Query: 225 LKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDG 284
           LKGAG TPYSR ADG AVLRSS+REFLCSEAMH LGIPTTRAL LV TG  V RDMFYDG
Sbjct: 121 LKGAGVTPYSRMADGRAVLRSSVREFLCSEAMHHLGIPTTRALSLVQTGDVVIRDMFYDG 180

Query: 285 NPKEEPGAIVCRVAQSFLRFGSYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNKSES 344
           +P+ E GAIVCRV+ SF+RFG+++I A R  +D   ++ L D+ I   F  + N  + E 
Sbjct: 181 HPQAEKGAIVCRVSPSFIRFGNFEIFAMR--DDKQTLQKLVDFTIDRDFPELRNYPEEER 238

Query: 345 LS 346
           L+
Sbjct: 239 LA 240

Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) (taxid: 265072)

>sp|Q7UKT5|Y9953_RHOBA UPF0061 protein RB9953 OS=Rhodopirellula baltica (strain SH1) GN=RB9953 PE=3 SV=1

 Score =  259 bits (663), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 130/233 (55%), Positives = 164/233 (70%), Gaps = 3/233 (1%)

Query: 104 DLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPK 163
           DL +D+ F R+LP D    +  R+V  A +++V P+  V  P+ VA S+ VA+ + LDPK
Sbjct: 4   DLTFDNRFTRDLPADTEPRNFTRQVHQAGFSRVKPTP-VSAPKWVAGSKEVAELIGLDPK 62

Query: 164 EFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWEL 223
                +     +G     G  P+A CYGGHQFG WAGQLGDGRAI LGE++    + W L
Sbjct: 63  WLGSAELTEVLAGNALADGMDPFAMCYGGHQFGNWAGQLGDGRAINLGEVVTADEKHWTL 122

Query: 224 QLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYD 283
           QLKGAG TPYSR ADGLAVLRSS+REFLCSEAMH LG+PTTRAL LV TG+ V RDMFYD
Sbjct: 123 QLKGAGLTPYSRTADGLAVLRSSVREFLCSEAMHHLGVPTTRALSLVLTGEKVLRDMFYD 182

Query: 284 GNPKEEPGAIVCRVAQSFLRFGSYQIHASRGQEDLDIVRTLADYAIRHHFRHI 336
           G+P+ E GAIVCRVA SF+RFG+++I ASR  ED + ++TL ++ IR  F H+
Sbjct: 183 GHPEHELGAIVCRVAPSFIRFGNFEIFASR--EDTETLQTLVEHTIRSEFSHL 233

Rhodopirellula baltica (strain SH1) (taxid: 243090)

>sp|Q8P8F8|Y2284_XANCP UPF0061 protein XCC2284 OS=Xanthomonas campestris pv. campestris (strain ATCC 33913 / NCPPB 528 / LMG 568) GN=XCC2284 PE=3 SV=1

 Score =  251 bits (640), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 130/229 (56%), Positives = 159/229 (69%), Gaps = 4/229 (1%)

Query: 105 LNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKE 164
           L +D+    ELPGDP      REVL A ++ V P+  V  P L+A+S  VA  L L  ++
Sbjct: 4   LQFDNRLRAELPGDPEEGPRRREVL-AAWSAVQPT-PVAAPTLLAYSADVAQRLGLRAED 61

Query: 165 FERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQ 224
              P F   F G     G  P+A  YGGHQFG WAGQLGDGRAI+LGE + +   R+ELQ
Sbjct: 62  LASPRFAEVFGGNALYPGMQPWAVNYGGHQFGHWAGQLGDGRAISLGEAIGVDGGRYELQ 121

Query: 225 LKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDG 284
           LKGAG TPYSR ADG AVLRSSIREFLCSEAMH+LG+PTTRAL LV TG  V RDMFYDG
Sbjct: 122 LKGAGPTPYSRGADGRAVLRSSIREFLCSEAMHYLGVPTTRALSLVGTGDAVVRDMFYDG 181

Query: 285 NPKEEPGAIVCRVAQSFLRFGSYQIHASRGQEDLDIVRTLADYAIRHHF 333
           +P+ EPGAIVCRVA SF+RFG++++ A+RG  D+D++R   D+ +   F
Sbjct: 182 HPRREPGAIVCRVAPSFIRFGNFELPAARG--DVDLLRQWVDFTLARDF 228

Xanthomonas campestris pv. campestris (strain ATCC 33913 / NCPPB 528 / LMG 568) (taxid: 190485)

>sp|Q4UVM9|Y1831_XANC8 UPF0061 protein XC_1831 OS=Xanthomonas campestris pv. campestris (strain 8004) GN=XC_1831 PE=3 SV=1

 Score =  251 bits (640), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 130/229 (56%), Positives = 159/229 (69%), Gaps = 4/229 (1%)

Query: 105 LNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKE 164
           L +D+    ELPGDP      REVL A ++ V P+  V  P L+A+S  VA  L L  ++
Sbjct: 4   LQFDNRLRAELPGDPEEGPRRREVL-AAWSAVQPT-PVAAPTLLAYSADVAQRLGLRAED 61

Query: 165 FERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQ 224
              P F   F G     G  P+A  YGGHQFG WAGQLGDGRAI+LGE + +   R+ELQ
Sbjct: 62  LASPRFAEVFGGNALYPGMQPWAVNYGGHQFGHWAGQLGDGRAISLGEAIGVDGGRYELQ 121

Query: 225 LKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDG 284
           LKGAG TPYSR ADG AVLRSSIREFLCSEAMH+LG+PTTRAL LV TG  V RDMFYDG
Sbjct: 122 LKGAGPTPYSRGADGRAVLRSSIREFLCSEAMHYLGVPTTRALSLVGTGDAVVRDMFYDG 181

Query: 285 NPKEEPGAIVCRVAQSFLRFGSYQIHASRGQEDLDIVRTLADYAIRHHF 333
           +P+ EPGAIVCRVA SF+RFG++++ A+RG  D+D++R   D+ +   F
Sbjct: 182 HPRREPGAIVCRVAPSFIRFGNFELPAARG--DVDLLRQWVDFTLARDF 228

Xanthomonas campestris pv. campestris (strain 8004) (taxid: 314565)

>sp|B0RS12|Y1894_XANCB UPF0061 protein xcc-b100_1894 OS=Xanthomonas campestris pv. campestris (strain B100) GN=xcc-b100_1894 PE=3 SV=1

 Score =  250 bits (639), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 129/229 (56%), Positives = 159/229 (69%), Gaps = 4/229 (1%)

Query: 105 LNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKE 164
           L +D+    +LPGDP      REVL A ++ V P+  V  P L+A+S  VA  L L  ++
Sbjct: 4   LQFDNRLRAQLPGDPEQGPRRREVL-AAWSAVRPT-PVAAPTLLAYSADVAQRLGLRAED 61

Query: 165 FERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQ 224
              P F   F G     G  P+A  YGGHQFG WAGQLGDGRAI+LGE + +   R+ELQ
Sbjct: 62  LASPQFAEVFGGNALYPGMQPWAVNYGGHQFGHWAGQLGDGRAISLGEAIGVDGGRYELQ 121

Query: 225 LKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDG 284
           LKGAG TPYSR ADG AVLRSSIREFLCSEAMH+LG+PTTRAL LV TG  V RDMFYDG
Sbjct: 122 LKGAGPTPYSRGADGRAVLRSSIREFLCSEAMHYLGVPTTRALSLVGTGDAVVRDMFYDG 181

Query: 285 NPKEEPGAIVCRVAQSFLRFGSYQIHASRGQEDLDIVRTLADYAIRHHF 333
           +P+ EPGAIVCRVA SF+RFG++++ A+RG  D+D++R   D+ +   F
Sbjct: 182 HPRREPGAIVCRVAPSFIRFGNFELPAARG--DVDLLRQWVDFTLARDF 228

Xanthomonas campestris pv. campestris (strain B100) (taxid: 509169)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	370
224053020	646	predicted protein [Populus trichocarpa]	0.897	0.513	0.746	1e-150
297746392	672	unnamed protein product [Vitis vinifera]	0.932	0.513	0.711	1e-145
225435594	651	PREDICTED: UPF0061 protein AZOSEA38000-l	0.932	0.529	0.711	1e-145
449502212	566	PREDICTED: UPF0061 protein AZOSEA38000-l	0.891	0.583	0.774	1e-143
449462599	649	PREDICTED: UPF0061 protein AZOSEA38000-l	0.891	0.508	0.774	1e-142
255544744	654	Selenoprotein O, putative [Ricinus commu	0.908	0.513	0.722	1e-140
13430492	585	unknown protein [Arabidopsis thaliana]	0.794	0.502	0.784	1e-138
357445153	792	hypothetical protein MTR_1g116880 [Medic	0.781	0.364	0.792	1e-138
30684227	633	uncharacterized protein [Arabidopsis tha	0.794	0.464	0.784	1e-137
51971098	630	unnamed protein product [Arabidopsis tha	0.794	0.466	0.784	1e-137

>gi|224053020|ref|XP_002297667.1| predicted protein [Populus trichocarpa] gi|222844925|gb|EEE82472.1| predicted protein [Populus trichocarpa]

 Score =  537 bits (1384), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 271/363 (74%), Positives = 294/363 (80%), Gaps = 31/363 (8%)

Query: 26  RPRLP-KFPFYPAYFTKSPSCP----------SIACHVSTTG-----------GGGAAQM 63
           RP LP KFPFYP  F KS  CP          S++ HVST+               ++  
Sbjct: 16  RPFLPIKFPFYPPPFVKSQFCPLSPPAHLFKPSLSRHVSTSSFPSSRGRGSSVSMESSSP 75

Query: 64  ESSASVDSVTHDLKNQRLDTETETDGGDESKMTKKLKALEDLNWDHSFVRELPGDPRTDS 123
           E + S+DSVT DLKNQ L        G +     KLK LEDLNWDHSFVR LPGDPR D+
Sbjct: 76  EPTVSLDSVTQDLKNQTL--------GPDDVSKAKLK-LEDLNWDHSFVRALPGDPRADT 126

Query: 124 IPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGA 183
           IPR+V+HACYTKV PSAEVENP+LVAWS+SVAD  +LDPKEFERPDFPL FSGA+PL GA
Sbjct: 127 IPRQVMHACYTKVLPSAEVENPELVAWSDSVADLFDLDPKEFERPDFPLLFSGASPLVGA 186

Query: 184 VPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVL 243
           +PYAQCYGGHQFGMWAGQLGDGRAITLGE++N KSERWELQLKG+G+TPYSRFADGLAVL
Sbjct: 187 LPYAQCYGGHQFGMWAGQLGDGRAITLGEVVNSKSERWELQLKGSGRTPYSRFADGLAVL 246

Query: 244 RSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLR 303
           RSSIREFLCSEAMH LGIPTTRAL LVTTGK+VTRDMFYDGN KEEPGAIVCRVA SFLR
Sbjct: 247 RSSIREFLCSEAMHCLGIPTTRALSLVTTGKYVTRDMFYDGNAKEEPGAIVCRVAPSFLR 306

Query: 304 FGSYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNKSESLSFSTGDEDHSVVDLTSNK 363
           FGSYQIHASRG+EDL+IVR LADYAIRHHF HIENMNKSESLSFSTGDEDHSVVDLTSNK
Sbjct: 307 FGSYQIHASRGKEDLEIVRALADYAIRHHFPHIENMNKSESLSFSTGDEDHSVVDLTSNK 366

Query: 364 YAG 366
           YA 
Sbjct: 367 YAA 369

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297746392|emb|CBI16448.3| unnamed protein product [Vitis vinifera]

 Score =  520 bits (1340), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 259/364 (71%), Positives = 290/364 (79%), Gaps = 19/364 (5%)

Query: 6   HFSTKPHLLFSSLSSSSSSLRPRLPK-FPFYPAYFTKSPSCPSIACHVSTTGGGGAAQME 64
           HFS     +FS    S  SL  +L + F F P   ++S   PS +   S +        +
Sbjct: 52  HFSYSSCPIFSPFFRSHPSLSSKLSRSFHFRPGVSSESAFSPSRSMEASPSA-------D 104

Query: 65  SSASVDSVTHDLKNQRLDTETETDGGDESKMTKKLKALEDLNWDHSFVRELPGDPRTDSI 124
           ++A+V+S+   L+NQRL +E            + L  LEDLNWDHSFV ELPGDPRTD I
Sbjct: 105 AAATVESLADGLRNQRLGSEN-----------RVLLRLEDLNWDHSFVHELPGDPRTDPI 153

Query: 125 PREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAV 184
           PR+VLHACYTK+SPSAEVENPQLVAW ESVA+ L+LDPKEFERPDFPL FSGA+ L G +
Sbjct: 154 PRQVLHACYTKISPSAEVENPQLVAWLESVAELLDLDPKEFERPDFPLIFSGASLLVGGL 213

Query: 185 PYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLR 244
           PYAQCYGGHQFGMWAGQLGDGRAITLGE+LN KSERWELQLKGAG+TPYSRFADGLAVLR
Sbjct: 214 PYAQCYGGHQFGMWAGQLGDGRAITLGELLNSKSERWELQLKGAGRTPYSRFADGLAVLR 273

Query: 245 SSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 304
           SSIREFLCSEAMH LGIPTTRALCLVTTGK+VTRDMFYDGNPKEEPGAIVCRVAQSFLRF
Sbjct: 274 SSIREFLCSEAMHSLGIPTTRALCLVTTGKYVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 333

Query: 305 GSYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNKSESLSFSTGDEDHSVVDLTSNKY 364
           GSYQIHA+RG+EDL IVR LADY IRHHF HIENM +SE LSFSTG++D S+VDLTSNKY
Sbjct: 334 GSYQIHAARGKEDLGIVRALADYTIRHHFPHIENMTRSEGLSFSTGEQDESIVDLTSNKY 393

Query: 365 AGNS 368
           A  S
Sbjct: 394 AAWS 397

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225435594|ref|XP_002285614.1| PREDICTED: UPF0061 protein AZOSEA38000-like [Vitis vinifera]

 Score =  520 bits (1338), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 259/364 (71%), Positives = 290/364 (79%), Gaps = 19/364 (5%)

Query: 6   HFSTKPHLLFSSLSSSSSSLRPRLPK-FPFYPAYFTKSPSCPSIACHVSTTGGGGAAQME 64
           HFS     +FS    S  SL  +L + F F P   ++S   PS +   S +        +
Sbjct: 31  HFSYSSCPIFSPFFRSHPSLSSKLSRSFHFRPGVSSESAFSPSRSMEASPSA-------D 83

Query: 65  SSASVDSVTHDLKNQRLDTETETDGGDESKMTKKLKALEDLNWDHSFVRELPGDPRTDSI 124
           ++A+V+S+   L+NQRL +E            + L  LEDLNWDHSFV ELPGDPRTD I
Sbjct: 84  AAATVESLADGLRNQRLGSEN-----------RVLLRLEDLNWDHSFVHELPGDPRTDPI 132

Query: 125 PREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAV 184
           PR+VLHACYTK+SPSAEVENPQLVAW ESVA+ L+LDPKEFERPDFPL FSGA+ L G +
Sbjct: 133 PRQVLHACYTKISPSAEVENPQLVAWLESVAELLDLDPKEFERPDFPLIFSGASLLVGGL 192

Query: 185 PYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLR 244
           PYAQCYGGHQFGMWAGQLGDGRAITLGE+LN KSERWELQLKGAG+TPYSRFADGLAVLR
Sbjct: 193 PYAQCYGGHQFGMWAGQLGDGRAITLGELLNSKSERWELQLKGAGRTPYSRFADGLAVLR 252

Query: 245 SSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 304
           SSIREFLCSEAMH LGIPTTRALCLVTTGK+VTRDMFYDGNPKEEPGAIVCRVAQSFLRF
Sbjct: 253 SSIREFLCSEAMHSLGIPTTRALCLVTTGKYVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 312

Query: 305 GSYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNKSESLSFSTGDEDHSVVDLTSNKY 364
           GSYQIHA+RG+EDL IVR LADY IRHHF HIENM +SE LSFSTG++D S+VDLTSNKY
Sbjct: 313 GSYQIHAARGKEDLGIVRALADYTIRHHFPHIENMTRSEGLSFSTGEQDESIVDLTSNKY 372

Query: 365 AGNS 368
           A  S
Sbjct: 373 AAWS 376

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449502212|ref|XP_004161576.1| PREDICTED: UPF0061 protein AZOSEA38000-like [Cucumis sativus]

 Score =  512 bits (1319), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 257/332 (77%), Positives = 278/332 (83%), Gaps = 2/332 (0%)

Query: 36  PAYFTKSPS-CPSIACHVSTTGGGGAAQMESSASVDSVTHDLKNQRLDTETETDGGDESK 94
           PA FT  PS  P+ + H        +A  E SASVDSV   LKNQ L+ +   DGG    
Sbjct: 42  PASFTSLPSPLPAHSRHGRRKLSMDSASPEVSASVDSVAEGLKNQSLNNDDRVDGGSSIN 101

Query: 95  MTKKLKALEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESV 154
              K K LEDLNWD+SFVRELPGDPRTD IPREVLHACY+KV PS EV++PQLVAWSESV
Sbjct: 102 HATK-KKLEDLNWDNSFVRELPGDPRTDIIPREVLHACYSKVLPSVEVQSPQLVAWSESV 160

Query: 155 ADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEIL 214
           AD L+LDP+EFERPDFPL FSGA+PL GA PYAQCYGGHQFGMWAGQLGDGRAITLGEIL
Sbjct: 161 ADLLDLDPQEFERPDFPLLFSGASPLVGASPYAQCYGGHQFGMWAGQLGDGRAITLGEIL 220

Query: 215 NLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGK 274
           N +SERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMH LGIPTTRALCL+TTG 
Sbjct: 221 NSRSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHSLGIPTTRALCLLTTGT 280

Query: 275 FVTRDMFYDGNPKEEPGAIVCRVAQSFLRFGSYQIHASRGQEDLDIVRTLADYAIRHHFR 334
           FVTRDMFYDGNPKEEPGAIVCRVAQSFLRFGSYQIHASRG++D  IVR LADY IRHHF 
Sbjct: 281 FVTRDMFYDGNPKEEPGAIVCRVAQSFLRFGSYQIHASRGKDDFKIVRALADYVIRHHFP 340

Query: 335 HIENMNKSESLSFSTGDEDHSVVDLTSNKYAG 366
           H+ENM+ S+S+SFSTG+ D SVVDLTSNKYA 
Sbjct: 341 HLENMSSSQSVSFSTGNTDSSVVDLTSNKYAA 372

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449462599|ref|XP_004149028.1| PREDICTED: UPF0061 protein AZOSEA38000-like [Cucumis sativus]

 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 257/332 (77%), Positives = 278/332 (83%), Gaps = 2/332 (0%)

Query: 36  PAYFTKSPS-CPSIACHVSTTGGGGAAQMESSASVDSVTHDLKNQRLDTETETDGGDESK 94
           PA FT  PS  P+ + H        +A  E SASVDSV   LKNQ L+ +   DGG    
Sbjct: 42  PASFTSLPSPLPAHSRHGRRKLSMDSASPEVSASVDSVAEGLKNQSLNNDDRVDGGSSIN 101

Query: 95  MTKKLKALEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESV 154
              K K LEDLNWD+SFVRELPGDPRTD IPREVLHACY+KV PS EV++PQLVAWSESV
Sbjct: 102 HATK-KKLEDLNWDNSFVRELPGDPRTDIIPREVLHACYSKVLPSVEVQSPQLVAWSESV 160

Query: 155 ADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEIL 214
           AD L+LDP+EFERPDFPL FSGA+PL GA PYAQCYGGHQFGMWAGQLGDGRAITLGEIL
Sbjct: 161 ADLLDLDPQEFERPDFPLLFSGASPLVGASPYAQCYGGHQFGMWAGQLGDGRAITLGEIL 220

Query: 215 NLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGK 274
           N +SERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMH LGIPTTRALCL+TTG 
Sbjct: 221 NSRSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHSLGIPTTRALCLLTTGT 280

Query: 275 FVTRDMFYDGNPKEEPGAIVCRVAQSFLRFGSYQIHASRGQEDLDIVRTLADYAIRHHFR 334
           FVTRDMFYDGNPKEEPGAIVCRVAQSFLRFGSYQIHASRG++D  IVR LADY IRHHF 
Sbjct: 281 FVTRDMFYDGNPKEEPGAIVCRVAQSFLRFGSYQIHASRGKDDFKIVRALADYVIRHHFP 340

Query: 335 HIENMNKSESLSFSTGDEDHSVVDLTSNKYAG 366
           H+ENM+ S+S+SFSTG+ D SVVDLTSNKYA 
Sbjct: 341 HLENMSSSQSVSFSTGNTDSSVVDLTSNKYAA 372

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255544744|ref|XP_002513433.1| Selenoprotein O, putative [Ricinus communis] gi|223547341|gb|EEF48836.1| Selenoprotein O, putative [Ricinus communis]

 Score =  505 bits (1301), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 258/357 (72%), Positives = 290/357 (81%), Gaps = 21/357 (5%)

Query: 27  PRLPKFPFYPA-------YFTKSPSCPSIACHVSTTGGGGAAQM---------ESSASVD 70
           PR  K  FYP+       ++++SP  P + C V+T+   G+  M          + + VD
Sbjct: 25  PRHFKSRFYPSSSFLSSHFYSRSPH-PYLVCGVNTSSSSGSVSMDSSGSPEAASTMSVVD 83

Query: 71  SVTHDLKNQRLDTETETDGGDESKMTKKLKA-LEDLNWDHSFVRELPGDPRTDSIPREVL 129
           SVT+D KNQ L  +   +   ++  T K+K+ L+DLNWDHSFVRELPGD RTD+IPR+VL
Sbjct: 84  SVTNDFKNQSLRDDDNNN---KNNTTSKVKSSLDDLNWDHSFVRELPGDSRTDTIPRQVL 140

Query: 130 HACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQC 189
           HAC++KV PSAEVENPQLVAWSESVA  L+LD KEFERPDF L FSGA+ L G++PYAQC
Sbjct: 141 HACFSKVFPSAEVENPQLVAWSESVAVLLDLDLKEFERPDFALKFSGASTLVGSLPYAQC 200

Query: 190 YGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIRE 249
           YGGHQFGMWAGQLGDGRAITLGEILN KSERWELQLKGAGKTPYSRFADGLAVLRSSIRE
Sbjct: 201 YGGHQFGMWAGQLGDGRAITLGEILNSKSERWELQLKGAGKTPYSRFADGLAVLRSSIRE 260

Query: 250 FLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRFGSYQI 309
           FLCSEAMH LGIPTTRALCLVTTGK+VTRDMFYDGNPKEEPGAIVCRVAQSFLRFGS+QI
Sbjct: 261 FLCSEAMHHLGIPTTRALCLVTTGKYVTRDMFYDGNPKEEPGAIVCRVAQSFLRFGSFQI 320

Query: 310 HASRGQEDLDIVRTLADYAIRHHFRHIENMNKSESLSFSTGDEDHSVVDLTSNKYAG 366
           HASRG+ED  IVR LADYAIRHHF HI+NM KSESLSFS G ED S+VDLTSNKYA 
Sbjct: 321 HASRGKEDFGIVRALADYAIRHHFPHIDNMTKSESLSFSMGAEDDSIVDLTSNKYAA 377

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|13430492|gb|AAK25868.1|AF360158_1 unknown protein [Arabidopsis thaliana]

 Score =  496 bits (1278), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 237/302 (78%), Positives = 260/302 (86%), Gaps = 8/302 (2%)

Query: 65  SSASVDSVTHDLKNQRLDTETETDGGDESKMTKKLKALEDLNWDHSFVRELPGDPRTDSI 124
           + +S DS+  DL+NQ L        G   +  K  K LED NWDHSFV+ELPGDPRTD I
Sbjct: 15  TDSSADSLAKDLQNQSL--------GAVDEGVKIKKKLEDFNWDHSFVKELPGDPRTDVI 66

Query: 125 PREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAV 184
            REVLHACY+KVSPS EV++PQLVAWS SVA+ L+LDPKEFERPDFPL  SGA PL GA+
Sbjct: 67  SREVLHACYSKVSPSVEVDDPQLVAWSVSVAELLDLDPKEFERPDFPLMLSGAKPLPGAM 126

Query: 185 PYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLR 244
            YAQCYGGHQFGMWAGQLGDGRAITLGE+LN K ERWELQLKGAG+TPYSRFADGLAVLR
Sbjct: 127 SYAQCYGGHQFGMWAGQLGDGRAITLGEVLNSKGERWELQLKGAGRTPYSRFADGLAVLR 186

Query: 245 SSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 304
           SSIREFLCSE MH LGIPTTRALCL+TTG+ VTRDMFYDGNPKEEPGAIVCRV+QSFLRF
Sbjct: 187 SSIREFLCSETMHCLGIPTTRALCLLTTGQNVTRDMFYDGNPKEEPGAIVCRVSQSFLRF 246

Query: 305 GSYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNKSESLSFSTGDEDHSVVDLTSNKY 364
           GSYQIHASRG+EDLDIVR LADYAI+HHF HIE+M++S+SLSF TGDED SVVDLTSNKY
Sbjct: 247 GSYQIHASRGKEDLDIVRKLADYAIKHHFPHIESMDRSDSLSFKTGDEDDSVVDLTSNKY 306

Query: 365 AG 366
           A 
Sbjct: 307 AA 308

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357445153|ref|XP_003592854.1| hypothetical protein MTR_1g116880 [Medicago truncatula] gi|355481902|gb|AES63105.1| hypothetical protein MTR_1g116880 [Medicago truncatula]

 Score =  496 bits (1277), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 240/303 (79%), Positives = 259/303 (85%), Gaps = 14/303 (4%)

Query: 65  SSASVDSVTHDLKNQRLDTETETDGGDESKMTKKLKALEDLNWDHSFVRELPGDPRTDSI 124
           S+  +DSVT + KNQ L             + KK + LEDLNWD+SFVR+LP DPRTD  
Sbjct: 53  SAPLLDSVTQEFKNQSL-------------IQKKKRELEDLNWDNSFVRDLPSDPRTDPF 99

Query: 125 PREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAV 184
           PREVLHACYTKVSPS  V++PQLV WSESVA+ L+LD  EF+RPDFPLFFSGA+P  GA 
Sbjct: 100 PREVLHACYTKVSPSVSVDDPQLVVWSESVAELLDLDNNEFQRPDFPLFFSGASPFVGAF 159

Query: 185 PYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLR 244
           PYAQCYGGHQFGMWAGQLGDGRAITLGEILN  S+RWELQLKGAGKTPYSRFADGLAVLR
Sbjct: 160 PYAQCYGGHQFGMWAGQLGDGRAITLGEILNSNSQRWELQLKGAGKTPYSRFADGLAVLR 219

Query: 245 SSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 304
           SS+REFLCSEAMH LGIPTTRAL LVTTGK VTRDMFYDGNPKEE GAIVCRVAQSFLRF
Sbjct: 220 SSVREFLCSEAMHHLGIPTTRALSLVTTGKLVTRDMFYDGNPKEEQGAIVCRVAQSFLRF 279

Query: 305 GSYQIHASRG-QEDLDIVRTLADYAIRHHFRHIENMNKSESLSFSTGDEDHSVVDLTSNK 363
           GSYQ+HASRG  EDL+IVR LADYAI+HHF HIENM+KSESLSFSTGDEDHSVVDLTSNK
Sbjct: 280 GSYQLHASRGSNEDLEIVRVLADYAIKHHFPHIENMSKSESLSFSTGDEDHSVVDLTSNK 339

Query: 364 YAG 366
           YA 
Sbjct: 340 YAA 342

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30684227|ref|NP_196807.2| uncharacterized protein [Arabidopsis thaliana] gi|24030204|gb|AAN41282.1| unknown protein [Arabidopsis thaliana] gi|332004460|gb|AED91843.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 237/302 (78%), Positives = 260/302 (86%), Gaps = 8/302 (2%)

Query: 65  SSASVDSVTHDLKNQRLDTETETDGGDESKMTKKLKALEDLNWDHSFVRELPGDPRTDSI 124
           + +S DS+  DL+NQ L        G   +  K  K LED NWDHSFV+ELPGDPRTD I
Sbjct: 63  TDSSADSLAKDLQNQSL--------GAVDEGVKIKKKLEDFNWDHSFVKELPGDPRTDVI 114

Query: 125 PREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAV 184
            REVLHACY+KVSPS EV++PQLVAWS SVA+ L+LDPKEFERPDFPL  SGA PL GA+
Sbjct: 115 SREVLHACYSKVSPSVEVDDPQLVAWSVSVAELLDLDPKEFERPDFPLMLSGAKPLPGAM 174

Query: 185 PYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLR 244
            YAQCYGGHQFGMWAGQLGDGRAITLGE+LN K ERWELQLKGAG+TPYSRFADGLAVLR
Sbjct: 175 SYAQCYGGHQFGMWAGQLGDGRAITLGEVLNSKGERWELQLKGAGRTPYSRFADGLAVLR 234

Query: 245 SSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 304
           SSIREFLCSE MH LGIPTTRALCL+TTG+ VTRDMFYDGNPKEEPGAIVCRV+QSFLRF
Sbjct: 235 SSIREFLCSETMHCLGIPTTRALCLLTTGQNVTRDMFYDGNPKEEPGAIVCRVSQSFLRF 294

Query: 305 GSYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNKSESLSFSTGDEDHSVVDLTSNKY 364
           GSYQIHASRG+EDLDIVR LADYAI+HHF HIE+M++S+SLSF TGDED SVVDLTSNKY
Sbjct: 295 GSYQIHASRGKEDLDIVRKLADYAIKHHFPHIESMDRSDSLSFKTGDEDDSVVDLTSNKY 354

Query: 365 AG 366
           A 
Sbjct: 355 AA 356

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|51971098|dbj|BAD44241.1| unnamed protein product [Arabidopsis thaliana]

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 237/302 (78%), Positives = 260/302 (86%), Gaps = 8/302 (2%)

Query: 65  SSASVDSVTHDLKNQRLDTETETDGGDESKMTKKLKALEDLNWDHSFVRELPGDPRTDSI 124
           + +S DS+  DL+NQ L        G   +  K  K LED NWDHSFV+ELPGDPRTD I
Sbjct: 60  TDSSADSLAKDLQNQSL--------GAVDEGVKIKKKLEDFNWDHSFVKELPGDPRTDVI 111

Query: 125 PREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAV 184
            REVLHACY+KVSPS EV++PQLVAWS SVA+ L+LDPKEFERPDFPL  SGA PL GA+
Sbjct: 112 SREVLHACYSKVSPSVEVDDPQLVAWSVSVAELLDLDPKEFERPDFPLMLSGAKPLPGAM 171

Query: 185 PYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLR 244
            YAQCYGGHQFGMWAGQLGDGRAITLGE+LN K ERWELQLKGAG+TPYSRFADGLAVLR
Sbjct: 172 SYAQCYGGHQFGMWAGQLGDGRAITLGEVLNSKGERWELQLKGAGRTPYSRFADGLAVLR 231

Query: 245 SSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 304
           SSIREFLCSE MH LGIPTTRALCL+TTG+ VTRDMFYDGNPKEEPGAIVCRV+QSFLRF
Sbjct: 232 SSIREFLCSETMHCLGIPTTRALCLLTTGQNVTRDMFYDGNPKEEPGAIVCRVSQSFLRF 291

Query: 305 GSYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNKSESLSFSTGDEDHSVVDLTSNKY 364
           GSYQIHASRG+EDLDIVR LADYAI+HHF HIE+M++S+SLSF TGDED SVVDLTSNKY
Sbjct: 292 GSYQIHASRGKEDLDIVRKLADYAIKHHFPHIESMDRSDSLSFKTGDEDDSVVDLTSNKY 351

Query: 365 AG 366
           A 
Sbjct: 352 AA 353

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	370
TAIR|locus:2182265	633	AT5G13030 "AT5G13030" [Arabido	0.891	0.521	0.728	4.6e-128
MGI|MGI:1919007	667	1300018J18Rik "RIKEN cDNA 1300	0.635	0.352	0.498	3.6e-50
POMBASE|SPAC20G4.05c	568	SPAC20G4.05c "UPF0061 family p	0.602	0.392	0.418	9.6e-41
UNIPROTKB|Q87VB1	487	PSPTO_5028 "UPF0061 protein PS	0.578	0.439	0.441	8.7e-40
UNIPROTKB|Q60B95	504	MCA0585 "UPF0061 protein MCA05	0.508	0.373	0.457	7e-38
UNIPROTKB|Q81YI0	488	BAS3307 "UPF0061 protein BA_35	0.518	0.393	0.449	1.1e-37
TIGR_CMR|BA_3567	488	BA_3567 "conserved hypothetica	0.518	0.393	0.449	1.1e-37
UNIPROTKB|Q47WD4	501	CPS_4238 "UPF0061 protein CPS_	0.567	0.419	0.407	1.9e-37
TIGR_CMR|CPS_4238	501	CPS_4238 "conserved hypothetic	0.567	0.419	0.407	1.9e-37
UNIPROTKB|Q5LQK9	472	SPO2480 "UPF0061 protein SPO24	0.510	0.400	0.477	3e-37

TAIR|locus:2182265 AT5G13030 "AT5G13030" [Arabidopsis thaliana (taxid:3702)]

 Score = 1257 (447.5 bits), Expect = 4.6e-128, P = 4.6e-128
 Identities = 247/339 (72%), Positives = 277/339 (81%)

Query:    28 RLPKFPFYPAYFTKSPSCPSIACHVSTTGGGGAAQME-SSASVDSVTHDLKNQRLDTETE 86
             ++P  P  P  F  SPS  S    + ++    ++    + +S DS+  DL+NQ L     
Sbjct:    25 KVPFCPSLPRQFRLSPSRSSSFRRMESSPASSSSPTPVTDSSADSLAKDLQNQSLGA--- 81

Query:    87 TDGGDESKMTKKLKALEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQ 146
              D G   K+ KKL   ED NWDHSFV+ELPGDPRTD I REVLHACY+KVSPS EV++PQ
Sbjct:    82 VDEG--VKIKKKL---EDFNWDHSFVKELPGDPRTDVISREVLHACYSKVSPSVEVDDPQ 136

Query:   147 LVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGR 206
             LVAWS SVA+ L+LDPKEFERPDFPL  SGA PL GA+ YAQCYGGHQFGMWAGQLGDGR
Sbjct:   137 LVAWSVSVAELLDLDPKEFERPDFPLMLSGAKPLPGAMSYAQCYGGHQFGMWAGQLGDGR 196

Query:   207 AITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRA 266
             AITLGE+LN K ERWELQLKGAG+TPYSRFADGLAVLRSSIREFLCSE MH LGIPTTRA
Sbjct:   197 AITLGEVLNSKGERWELQLKGAGRTPYSRFADGLAVLRSSIREFLCSETMHCLGIPTTRA 256

Query:   267 LCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRFGSYQIHASRGQEDLDIVRTLAD 326
             LCL+TTG+ VTRDMFYDGNPKEEPGAIVCRV+QSFLRFGSYQIHASRG+EDLDIVR LAD
Sbjct:   257 LCLLTTGQNVTRDMFYDGNPKEEPGAIVCRVSQSFLRFGSYQIHASRGKEDLDIVRKLAD 316

Query:   327 YAIRHHFRHIENMNKSESLSFSTGDEDHSVVDLTSNKYA 365
             YAI+HHF HIE+M++S+SLSF TGDED SVVDLTSNKYA
Sbjct:   317 YAIKHHFPHIESMDRSDSLSFKTGDEDDSVVDLTSNKYA 355

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

MGI|MGI:1919007 1300018J18Rik "RIKEN cDNA 1300018J18 gene" [Mus musculus (taxid:10090)]

 Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
 Identities = 126/253 (49%), Positives = 155/253 (61%)

Query:   102 LEDLNWDHSFVRELPGD-PRT---DSI--PREVLHACYTKVSPSAEVENPQLVAWSESVA 155
             L  L +D+  +RELP + P     DS+  PR V  AC+++  P A +  P+LVA SE   
Sbjct:    46 LAGLRFDNRALRELPVETPPPGPEDSLATPRPVPGACFSRARP-APLRRPRLVALSEPAL 104

Query:   156 DSLELDP-KEFE-RPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEI 213
               L L+  +E E   +  LFFSG   L G  P A CY GHQFG +AGQLGDG A+ LGE+
Sbjct:   105 ALLGLEASEEAEVEAEAALFFSGNALLPGTEPAAHCYCGHQFGQFAGQLGDGAAMYLGEV 164

Query:   214 LNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTG 273
                  ERWELQLKGAG TP+SR ADG  VLRSSIREFLCSEAM  LGIPTTRA   VT+ 
Sbjct:   165 CTAAGERWELQLKGAGPTPFSRQADGRKVLRSSIREFLCSEAMFHLGIPTTRAGACVTSE 224

Query:   274 KFVTRDMFYDGNPKEEPGAIVCRVAQSFLRFGSYQI------HASRGQEDL--DIVRT-L 324
               V RD+FYDGNPK E   +V R+A +F+RFGS++I      H  R    +  D +R  L
Sbjct:   225 STVMRDVFYDGNPKYEKCTVVLRIAPTFIRFGSFEIFKPPDEHTGRAGPSVGRDDIRVQL 284

Query:   325 ADYAIRHHFRHIE 337
              DY I   +  I+
Sbjct:   285 LDYVISSFYPEIQ 297

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

POMBASE|SPAC20G4.05c SPAC20G4.05c "UPF0061 family protein" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
 Identities = 105/251 (41%), Positives = 149/251 (59%)

Query:    95 MTKKLKALEDLNWDHSFVRELPGDPRTDSIPR------EVLHA--------CYTKVSPSA 140
             M+KKLK   DL    +F   LP DP   ++         +LH          +T ++PS 
Sbjct:     1 MSKKLK---DLPVSSTFTSNLPPDPLVPTVQAMKKADDRILHVPRFVEGGGLFTYLTPSL 57

Query:   141 EVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGAT-PLAGAVPYAQCYGGHQFGMWA 199
             +  N QL+A+S S   SL L+  E +   F     G+   +    P+AQCYGG+QFG WA
Sbjct:    58 KA-NSQLLAYSPSSVKSLGLEESETQTEAFQQLVVGSNVDVNKCCPWAQCYGGYQFGDWA 116

Query:   200 GQLGDGRAITLGEILNLKS-ERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHF 258
             GQLGDGR ++L E+ N ++ +R+E+Q+KGAG+TPYSRFADG AVLRSSIRE+LC EA++ 
Sbjct:   117 GQLGDGRVVSLCELTNPETGKRFEIQVKGAGRTPYSRFADGKAVLRSSIREYLCCEALYA 176

Query:   259 LGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRFGSYQIHASRGQEDL 318
             LGIPTT+AL +      V +          EP A+VCR+A S++R G++ +     Q  +
Sbjct:   177 LGIPTTQALAISNLEGVVAQ------RETVEPCAVVCRMAPSWIRIGTFDLQGINNQ--I 228

Query:   319 DIVRTLADYAI 329
             + +R LADY +
Sbjct:   229 ESLRKLADYCL 239

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=IDA

GO:0005739 "mitochondrion" evidence=ISS

GO:0005829 "cytosol" evidence=IDA

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q87VB1 PSPTO_5028 "UPF0061 protein PSPTO_5028" [Pseudomonas syringae pv. tomato str. DC3000 (taxid:223283)]

 Score = 424 (154.3 bits), Expect = 8.7e-40, P = 8.7e-40
 Identities = 106/240 (44%), Positives = 144/240 (60%)

Query:    99 LKALEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSL 158
             +KAL++L +D+ F R   GD            A  T V P   ++ P+LV  SES    L
Sbjct:     1 MKALDELVFDNRFARL--GD------------AFSTHVLPEP-IDAPRLVVASESALALL 45

Query:   159 ELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKS 218
             +L P++ E P F   FSG    A A P A  Y GHQFG +  +LGDGR + LGE+ N   
Sbjct:    46 DLAPEQSELPLFAEIFSGHKLWAEAEPRAMVYSGHQFGSYNPRLGDGRGLLLGEVYNDAG 105

Query:   219 ERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTR 278
             E W+L LKGAG+TPYSR  DG AVLRSSIREFL SEA+H LGIP++RA C+V++   V R
Sbjct:   106 EHWDLHLKGAGRTPYSRMGDGRAVLRSSIREFLASEALHALGIPSSRAACVVSSNTPVWR 165

Query:   279 DMFYDGNPKEEPGAIVCRVAQSFLRFGSYQ-IHASRGQEDLDIVRTLADYAIRHHFRHIE 337
             +       K+E  A+V R+AQS +RFGS + +  ++  E L   +TLA++ +  H+ H +
Sbjct:   166 E-------KQEYAAMVLRLAQSHVRFGSLEYLFYTKQPEHL---KTLAEHVLTMHYPHCQ 215

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q60B95 MCA0585 "UPF0061 protein MCA0585" [Methylococcus capsulatus str. Bath (taxid:243233)]

 Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
 Identities = 91/199 (45%), Positives = 118/199 (59%)

Query:   139 SAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMW 198
             +  +  P++V ++ ++A  L   P+    P      +G  P  G    A  Y GHQFG W
Sbjct:    37 ATSLPEPRMVHFNAALAGELGFGPEA--GPQLLEILAGNRPWPGYASSASVYAGHQFGAW 94

Query:   199 AGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHF 258
               QLGDGRA+ + E+     ER ELQLKGAG TPYSR  DG AVLRSSIRE+L SEAMH 
Sbjct:    95 VPQLGDGRALLIAEVRTPARERVELQLKGAGPTPYSRGLDGRAVLRSSIREYLASEAMHA 154

Query:   259 LGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRFGSYQIHASRGQEDL 318
             LG+PTTR L LV + + V R+         E  A+VCR A SF+RFG ++  A RGQ + 
Sbjct:   155 LGVPTTRCLSLVASPQPVARETV-------ESAAVVCRAAASFVRFGQFEYFAGRGQTE- 206

Query:   319 DIVRTLADYAIRHHFRHIE 337
              + R LAD+ I  HF H++
Sbjct:   207 PMAR-LADHVIAEHFPHLQ 224

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q81YI0 BAS3307 "UPF0061 protein BA_3567/GBAA_3567/BAS3307" [Bacillus anthracis (taxid:1392)]

 Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
 Identities = 93/207 (44%), Positives = 133/207 (64%)

Query:   133 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERP-DFPLFFSGATPLAGAVPYAQCYG 191
             YT++ P+  V +P+LV  + S+A SL  +P+E ++  +  +F   A P  GA P AQ Y 
Sbjct:    23 YTEIPPTP-VSSPELVKLNHSLAISLGFNPEELKKEAEIAIFAGNALP-EGAHPLAQAYA 80

Query:   192 GHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFL 251
             GHQFG +   LGDGRA+ +GE +    +R+++QLKG+G TPYSR  DG A L   +RE++
Sbjct:    81 GHQFGHF-NMLGDGRALLIGEQMTPSGKRFDIQLKGSGPTPYSRRGDGRAALGPMLREYI 139

Query:   252 CSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRFGSYQIHA 311
              SEAM+ L IPTTR+L +VTTG+   R+        + PGAI+ RVA S +R G++Q  A
Sbjct:   140 ISEAMYALDIPTTRSLAVVTTGEPTYRET-------KLPGAILTRVASSHIRVGTFQYAA 192

Query:   312 SRGQ-EDLDIVRTLADYAIRHHFRHIE 337
             +RG  EDL   ++LADY I+ H+  IE
Sbjct:   193 ARGSIEDL---QSLADYTIKRHYPEIE 216

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|BA_3567 BA_3567 "conserved hypothetical protein" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
 Identities = 93/207 (44%), Positives = 133/207 (64%)

Query:   133 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERP-DFPLFFSGATPLAGAVPYAQCYG 191
             YT++ P+  V +P+LV  + S+A SL  +P+E ++  +  +F   A P  GA P AQ Y 
Sbjct:    23 YTEIPPTP-VSSPELVKLNHSLAISLGFNPEELKKEAEIAIFAGNALP-EGAHPLAQAYA 80

Query:   192 GHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFL 251
             GHQFG +   LGDGRA+ +GE +    +R+++QLKG+G TPYSR  DG A L   +RE++
Sbjct:    81 GHQFGHF-NMLGDGRALLIGEQMTPSGKRFDIQLKGSGPTPYSRRGDGRAALGPMLREYI 139

Query:   252 CSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRFGSYQIHA 311
              SEAM+ L IPTTR+L +VTTG+   R+        + PGAI+ RVA S +R G++Q  A
Sbjct:   140 ISEAMYALDIPTTRSLAVVTTGEPTYRET-------KLPGAILTRVASSHIRVGTFQYAA 192

Query:   312 SRGQ-EDLDIVRTLADYAIRHHFRHIE 337
             +RG  EDL   ++LADY I+ H+  IE
Sbjct:   193 ARGSIEDL---QSLADYTIKRHYPEIE 216

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q47WD4 CPS_4238 "UPF0061 protein CPS_4238" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
 Identities = 90/221 (40%), Positives = 134/221 (60%)

Query:   127 EVLHACYTKVSPSAEVENPQLVAWSESVADSLELD-PKEFERPDFPLFFSGATPLAGAVP 185
             + L   +++ +  A V  P L+ W+E +A +L +   K+ +      +FSG   + G+ P
Sbjct:    10 QALGESFSQQTLPAPVGQPSLLLWNEPLAKALTIPFTKDNDAELLSQYFSGNQLIEGSKP 69

Query:   186 YAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRS 245
              AQ Y GHQFG +  QLGDGRA  LG+I + + +RW++QLKG+G + +SR  DG   L  
Sbjct:    70 VAQAYSGHQFGHFNPQLGDGRAHLLGDIADTQGQRWDIQLKGSGVSDFSRQGDGRCALGP 129

Query:   246 SIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRFG 305
             ++RE++ SEAM  LG+PTTR L +VTTG+ V R+  YDG       A+V R+A S +R G
Sbjct:   130 ALREYIMSEAMFALGVPTTRCLAVVTTGENVYRERPYDG-------AVVTRIAASHIRVG 182

Query:   306 SYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNKSESLS 346
             ++Q  A+RG  D D ++ L +YAI  HF  +   N SE+ S
Sbjct:   183 TFQYFAARG--DTDSLKKLTNYAINRHFPELI-ANSSENSS 220

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|CPS_4238 CPS_4238 "conserved hypothetical protein" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
 Identities = 90/221 (40%), Positives = 134/221 (60%)

Query:   127 EVLHACYTKVSPSAEVENPQLVAWSESVADSLELD-PKEFERPDFPLFFSGATPLAGAVP 185
             + L   +++ +  A V  P L+ W+E +A +L +   K+ +      +FSG   + G+ P
Sbjct:    10 QALGESFSQQTLPAPVGQPSLLLWNEPLAKALTIPFTKDNDAELLSQYFSGNQLIEGSKP 69

Query:   186 YAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRS 245
              AQ Y GHQFG +  QLGDGRA  LG+I + + +RW++QLKG+G + +SR  DG   L  
Sbjct:    70 VAQAYSGHQFGHFNPQLGDGRAHLLGDIADTQGQRWDIQLKGSGVSDFSRQGDGRCALGP 129

Query:   246 SIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRFG 305
             ++RE++ SEAM  LG+PTTR L +VTTG+ V R+  YDG       A+V R+A S +R G
Sbjct:   130 ALREYIMSEAMFALGVPTTRCLAVVTTGENVYRERPYDG-------AVVTRIAASHIRVG 182

Query:   306 SYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNKSESLS 346
             ++Q  A+RG  D D ++ L +YAI  HF  +   N SE+ S
Sbjct:   183 TFQYFAARG--DTDSLKKLTNYAINRHFPELI-ANSSENSS 220

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q5LQK9 SPO2480 "UPF0061 protein SPO2480" [Ruegeria pomeroyi DSS-3 (taxid:246200)]

 Score = 400 (145.9 bits), Expect = 3.0e-37, P = 3.0e-37
 Identities = 96/201 (47%), Positives = 124/201 (61%)

Query:   133 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGG 192
             YT  +P   V  P+LVA++  +A  L + P E E     +F   A P  GA P AQ Y G
Sbjct:    19 YTAQAPQP-VRAPRLVAFNADLARLLGIAPGEVEEMA-QVFAGNAVP-QGAEPLAQLYSG 75

Query:   193 HQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLC 252
             HQFG +  QLGDGRAI LGE+L     R ++QLKGAG+TPYSR  DG A L   +RE++ 
Sbjct:    76 HQFGNYNPQLGDGRAILLGEVLGSDGIRRDIQLKGAGRTPYSRGGDGRAWLGPVLREYVV 135

Query:   253 SEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRFGSYQIHAS 312
             SEAM  LGIPTTRAL  V TG+ V R+          PGA++ RVAQS LR G++Q+ A+
Sbjct:   136 SEAMAALGIPTTRALAAVETGETVRRESAL-------PGAVLTRVAQSHLRVGTFQVFAA 188

Query:   313 RGQEDLDIVRTLADYAIRHHF 333
             RG+  +  ++ L DYAI  H+
Sbjct:   189 RGE--IAHLKRLTDYAIARHY 207

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	fgenesh4_pg.C_LG_I000130	hypothetical protein (646 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	eugene3.89120002	Predicted protein (235 aa)	•								0.534
	eugene3.139720002	Predicted protein (128 aa)	•								0.533
	gw1.XII.1071.1	hypothetical protein (100 aa)	•								0.488
	gw1.19427.3.1	hypothetical protein (361 aa)							•		0.402
	eugene3.104060001	Predicted protein (433 aa)	•								0.400

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	370
PRK00029	487	PRK00029, PRK00029, hypothetical protein; Validate	1e-104
COG0397	488	COG0397, COG0397, Uncharacterized conserved protei	5e-88
pfam02696	487	pfam02696, UPF0061, Uncharacterized ACR, YdiU/UPF0	3e-49

>gnl|CDD|234583 PRK00029, PRK00029, hypothetical protein; Validated

 Score =  314 bits (807), Expect = e-104
 Identities = 108/241 (44%), Positives = 141/241 (58%), Gaps = 24/241 (9%)

Query: 98  KLKALEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADS 157
            +  L  L +D+ F R  P              A YT+V+P      P+L   ++ +A  
Sbjct: 1   TMNPLLALPFDNRFARLGP--------------AFYTRVAP-TPFPAPRLRFRNDELAAL 45

Query: 158 LELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLK 217
           L LDP+E + P+F   F G   L G  P A  Y GHQFG++  QLGDGR I LGE+ +  
Sbjct: 46  LGLDPEELDDPEFAEVFGGNALLPGMEPLAMVYHGHQFGVYNPQLGDGRGILLGEVRDAD 105

Query: 218 SERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVT 277
              ++LQLKGAG+TPYSR  DG AVLRSSIRE+L SEAMH LGIPTTRAL LV TG+ V 
Sbjct: 106 GRLYDLQLKGAGRTPYSRMGDGRAVLRSSIREYLASEAMHALGIPTTRALSLVETGEPVY 165

Query: 278 RDMFYDGNPKEEPGAIVCRVAQSFLRFGSYQIHASRGQEDLDIVRTLADYAIRHHFRHIE 337
           R+         E GA++ RVA S +RFG+++  A RG  +L  +R LADY I  H+  + 
Sbjct: 166 RE-------SPERGAVLTRVAPSHIRFGTFERFAYRGDPEL--LRQLADYVIARHYPELA 216

Query: 338 N 338
           +
Sbjct: 217 D 217

Length = 487

>gnl|CDD|223474 COG0397, COG0397, Uncharacterized conserved protein [Function unknown]

 Score =  273 bits (700), Expect = 5e-88
 Identities = 103/246 (41%), Positives = 138/246 (56%), Gaps = 24/246 (9%)

Query: 102 LEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELD 161
              L +D  F                     YT V+P A   NP+L   ++ +A +L LD
Sbjct: 5   QAALKFDPRFASLGG--------------EFYTPVTP-APFPNPRLRWRNDRLAATLGLD 49

Query: 162 PKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERW 221
           P   +   F   F G   L GA P A  Y GHQFG++  QLGDGR   LGE+     E +
Sbjct: 50  PSLLDDEAFAEVFGGFQVLNGAPPLAMRYSGHQFGVYNPQLGDGRGFLLGELRGADGELF 109

Query: 222 ELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMF 281
           ++QLKGAG+TPYSR  DG AVLRSSIRE+L SEA+H LGIPTTRAL LV TG+ V R+  
Sbjct: 110 DIQLKGAGRTPYSRGGDGRAVLRSSIREYLASEALHALGIPTTRALSLVETGEPVQRED- 168

Query: 282 YDGNPKEEPGAIVCRVAQSFLRFGSYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNK 341
                 EEP A++ R+A S +RFG+++  A R + DL  +R LAD+ I H+F  + + ++
Sbjct: 169 ------EEPSAVLTRLAPSHIRFGTFERFAYRDRRDL--LRQLADHVIEHYFPDLADESE 220

Query: 342 SESLSF 347
               + 
Sbjct: 221 RPYAAL 226

Length = 488

>gnl|CDD|217189 pfam02696, UPF0061, Uncharacterized ACR, YdiU/UPF0061 family

 Score =  172 bits (437), Expect = 3e-49
 Identities = 82/226 (36%), Positives = 114/226 (50%), Gaps = 10/226 (4%)

Query: 121 TDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPL 180
           T     E L          A     +L   ++ +A  L L+P + +  +F         L
Sbjct: 7   TYEPALESLGYEAFDPVSLATFPEHRLRFRNDRLAPMLGLEPSQLKDNNFVEAVQDQEGL 66

Query: 181 AGAV--PYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFAD 238
              V  P A  Y G+QFG +A QLGDGR   LG++  +  E ++  LKGAG+TPYSR  D
Sbjct: 67  LHGVRPPLALVYSGYQFGEYAPQLGDGRGFLLGQVRLVDGELFDWGLKGAGQTPYSRGGD 126

Query: 239 GLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVA 298
           G AVLRS IRE L SEA+H LGIPTTRAL LV TG      ++    P  EP A++ R A
Sbjct: 127 GRAVLRSGIREVLASEALHRLGIPTTRALSLVETGD----SLWRRDEP--EPAAVMIRFA 180

Query: 299 QSFLRFGSYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNKSES 344
            S +RFG+++    R     + +  L D+ I  ++  +   N  + 
Sbjct: 181 PSHIRFGTFERFHYR--HQTEQIAQLLDHVIVTYYPEVSGSNSDDE 224

Length = 487

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	370
PRK00029	487	hypothetical protein; Validated	100.0
COG0397	488	Uncharacterized conserved protein [Function unknow	100.0
PF02696	487	UPF0061: Uncharacterized ACR, YdiU/UPF0061 family;	100.0
KOG2542	500	consensus Uncharacterized conserved protein (YdiU	100.0
KOG2542	500	consensus Uncharacterized conserved protein (YdiU	97.96

>PRK00029 hypothetical protein; Validated

Probab=100.00  E-value=9e-89  Score=688.18  Aligned_cols=221  Identities=48%  Similarity=0.796  Sum_probs=206.5

Q ss_pred             cccCcccccccccCCCCCCCCCCcccccCcceeecCCCCCCCCCeEEEeCHHHHHHCCCCccCCCCCChhhhccCCcCCC
Q 017506          102 LEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLA  181 (370)
Q Consensus       102 l~~l~~~n~f~~~LP~D~~~~~~~R~V~~~~ys~v~P~p~~~~P~Lv~~n~~la~~LGLd~~~~~~~~~~~~~sGn~~~~  181 (370)
                      +..++|+|+|.+.              ++.||++|.|++ +++|+|+++|+++|++||||++++++++++++|+||.+++
T Consensus         5 ~~~~~~~~~~~~l--------------~~~~~~~v~p~~-~~~p~l~~~n~~la~~Lgld~~~~~~~~~~~~~sG~~~~~   69 (487)
T PRK00029          5 LLALPFDNRFARL--------------GPAFYTRVAPTP-FPAPRLRFRNDELAALLGLDPEELDDPEFAEVFGGNALLP   69 (487)
T ss_pred             cccCCCCCCHhhc--------------CccceeecCCcc-CCCCEEEEeCHHHHHHcCCCchhcCCHHHHHHhcCCCCCC
Confidence            3445677777653              359999999996 9999999999999999999999999999999999999999


Q ss_pred             CCccchhhcccCCCCCCCCcCccccccccceeecCCCceeEeeeccCCCCCCccCCCCccccchhhHHHHHHHhhhhcCC
Q 017506          182 GAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGI  261 (370)
Q Consensus       182 g~~P~Aq~YaGHQFG~fagQLGDGRAilLGEv~~~~G~r~ELQLKGAG~TPYSR~gDGRAVLRSSIREyL~SEAMhaLGI  261 (370)
                      |+.|+||||+|||||+|||||||||||+|||+++++|++|||||||||+|||||+|||||||||||||||||||||+|||
T Consensus        70 g~~P~A~~YaGHQFG~~~pqLGDGRailLGEv~~~~g~~~dlqLKGsG~TPySR~gDGRAvLrssiREyL~SEAMhaLGI  149 (487)
T PRK00029         70 GMEPLAMVYHGHQFGVYNPQLGDGRGILLGEVRDADGRLYDLQLKGAGRTPYSRMGDGRAVLRSSIREYLASEAMHALGI  149 (487)
T ss_pred             CcchHHHHHhcccCCCCCCCCCCcceEEEEEEECCCCCEEEEeccCCCCCCCCCCCCCchhhhhHHHHHHHHHHHHhcCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcceeEEEecCCeeeeccccCCCCCCCCceeEEeeeccceeeechhhhhhcCCCCHHHHHHHHHHHHHhhCCcccccCC
Q 017506          262 PTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRFGSYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNK  341 (370)
Q Consensus       262 PTTRALaLV~Sge~V~Re~~y~gn~~~EpgAIv~RvApShIRfGsFE~fa~r~~~d~~~Lr~LaDyvI~~hfP~~~~~~~  341 (370)
                      |||||||||+||++|+|+       +.||||||||||+|||||||||||+++  ++.+.||+|+||||++|||++.+.+ 
T Consensus       150 PTTRaLalv~tge~V~R~-------~~e~gAvl~RvA~ShiRfGtFe~~a~~--~~~~~l~~L~dy~I~~hyP~~~~~~-  219 (487)
T PRK00029        150 PTTRALSLVETGEPVYRE-------SPERGAVLTRVAPSHIRFGTFERFAYR--GDPELLRQLADYVIARHYPELADAE-  219 (487)
T ss_pred             CccceEEEEecCCceecC-------CCCceeEEEEecCccccceeehhhhhc--CCHHHHHHHHHHHHHHHCccccccc-
Confidence            999999999999999999       799999999999999999999999999  6899999999999999999997643 


Q ss_pred             CCceec
Q 017506          342 SESLSF  347 (370)
Q Consensus       342 ~~~~~~  347 (370)
                      ++|+.|
T Consensus       220 ~~y~~~  225 (487)
T PRK00029        220 DPYLAL  225 (487)
T ss_pred             cHHHHH
Confidence            334433

>COG0397 Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=1.1e-85  Score=659.07  Aligned_cols=223  Identities=45%  Similarity=0.720  Sum_probs=212.1

Q ss_pred             ccccCcccccccccCCCCCCCCCCcccccCcceeecCCCCCCCCCeEEEeCHHHHHHCCCCccCCCCCChhhhccCCcCC
Q 017506          101 ALEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPL  180 (370)
Q Consensus       101 ~l~~l~~~n~f~~~LP~D~~~~~~~R~V~~~~ys~v~P~p~~~~P~Lv~~n~~la~~LGLd~~~~~~~~~~~~~sGn~~~  180 (370)
                      .+..++|++.|.++.              +.||+.|.|+| +++|+|+++|+++|..||||+++++++.|+++|+|+.++
T Consensus         4 ~~~~~~~~~r~~~l~--------------~~~~t~v~p~p-~~~~~L~~~n~~la~~LgL~~~~~~~~~~~~~f~G~~v~   68 (488)
T COG0397           4 PQAALKFDPRFASLG--------------GEFYTPVTPAP-FPNPRLRWRNDRLAATLGLDPSLLDDEAFAEVFGGFQVL   68 (488)
T ss_pred             cccccCccHHHHhhc--------------hhhhcCcCCcc-CCCceeeeeCHhHHHhcCCChHhccChhHHHHhccCCCC
Confidence            345677888888765              49999999996 999999999999999999999999999999999999999


Q ss_pred             CCCccchhhcccCCCCCCCCcCccccccccceeecCCCceeEeeeccCCCCCCccCCCCccccchhhHHHHHHHhhhhcC
Q 017506          181 AGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLG  260 (370)
Q Consensus       181 ~g~~P~Aq~YaGHQFG~fagQLGDGRAilLGEv~~~~G~r~ELQLKGAG~TPYSR~gDGRAVLRSSIREyL~SEAMhaLG  260 (370)
                      +++.|+||+|+|||||+|||||||||+|+|||+.+++|+++||||||||+|||||+|||||||||+|||||||||||+||
T Consensus        69 ~~~~plA~~Y~GhQFG~~~~qLGDGR~ilLgE~~~~~G~~~diqlKGaG~TPySR~gDGRAvLrssiRE~l~SEAmh~LG  148 (488)
T COG0397          69 NGAPPLAMRYSGHQFGVYNPQLGDGRGFLLGELRGADGELFDIQLKGAGRTPYSRGGDGRAVLRSSIREYLASEALHALG  148 (488)
T ss_pred             CCCChhhhhhcccccccccCccCCceeeeeeeeecCCCcEEEEEeccCCCCCccccCCcchhhhhhHHHHHHHHHHHHcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcceeEEEecCCeeeeccccCCCCCCCCceeEEeeeccceeeechhhhhhcCCCCHHHHHHHHHHHHHhhCCcccccC
Q 017506          261 IPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRFGSYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMN  340 (370)
Q Consensus       261 IPTTRALaLV~Sge~V~Re~~y~gn~~~EpgAIv~RvApShIRfGsFE~fa~r~~~d~~~Lr~LaDyvI~~hfP~~~~~~  340 (370)
                      ||||||||||+||++|+|+       +.||||||||||+|||||||||+|+++  ++.+.||+|+||||+||||++....
T Consensus       149 IpTTRaL~lv~tg~~v~Re-------~~ep~Avl~R~A~ShIRfGtFe~f~~~--~~~e~l~~LaD~vI~~~~p~~~~~~  219 (488)
T COG0397         149 IPTTRALSLVETGEPVQRE-------DEEPSAVLTRLAPSHIRFGTFERFAYR--DRRDLLRQLADHVIEHYFPDLADES  219 (488)
T ss_pred             CCCcceeeeecCCCceecc-------ccccceEEEEecccceeeeccchhhhc--CChHHHHHHHHHHHHHhchhhhccC
Confidence            9999999999999999999       689999999999999999999999999  7899999999999999999999766


Q ss_pred             CCCceec
Q 017506          341 KSESLSF  347 (370)
Q Consensus       341 ~~~~~~~  347 (370)
                      +++|+.|
T Consensus       220 e~~Y~~~  226 (488)
T COG0397         220 ERPYAAL  226 (488)
T ss_pred             cchHHHH
Confidence            6666654

>PF02696 UPF0061: Uncharacterized ACR, YdiU/UPF0061 family; InterPro: IPR003846 The proteins in this entry are functionally uncharacterised

Probab=100.00  E-value=1.5e-84  Score=657.51  Aligned_cols=202  Identities=59%  Similarity=0.951  Sum_probs=190.7

Q ss_pred             ccccCcceeecCCCCCCC---CCeEEEeCHHHHHHCCCCccCCCCCChhhh-ccCCcCCCC-CccchhhcccCCCCCCCC
Q 017506          126 REVLHACYTKVSPSAEVE---NPQLVAWSESVADSLELDPKEFERPDFPLF-FSGATPLAG-AVPYAQCYGGHQFGMWAG  200 (370)
Q Consensus       126 R~V~~~~ys~v~P~p~~~---~P~Lv~~n~~la~~LGLd~~~~~~~~~~~~-~sGn~~~~g-~~P~Aq~YaGHQFG~fag  200 (370)
                      +.+...+|+.+.|++ +.   +|+||++|+.+|++|||+++++++++++++ ++|+.+++| +.|+||||+|||||+|+|
T Consensus        10 ~~~~~~~~~~~~p~~-~~~~~~p~lv~~n~~la~~Lgl~~~~~~~~~~~~~~~~g~~~~~g~~~p~A~~YaGHQFG~~~~   88 (487)
T PF02696_consen   10 SALLSLFYSFVSPVP-PAPFPNPRLVAFNDDLAEELGLDPSELESPEFAEFVFSGNKLLPGSAEPLAQAYAGHQFGQFAP   88 (487)
T ss_pred             HhhhccCCceecccc-CCCCCCCEEEEECHHHHHHcCCChhHcCChhHHHHhhhhhccCCCCcchHHHHHcCCCCCCCCC
Confidence            344567777777775 44   999999999999999999999999999987 899999999 999999999999999999


Q ss_pred             cCccccccccceeecCCCceeEeeeccCCCCCCccCCCCccccchhhHHHHHHHhhhhcCCCCcceeEEEecC-Ceeeec
Q 017506          201 QLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTG-KFVTRD  279 (370)
Q Consensus       201 QLGDGRAilLGEv~~~~G~r~ELQLKGAG~TPYSR~gDGRAVLRSSIREyL~SEAMhaLGIPTTRALaLV~Sg-e~V~Re  279 (370)
                      ||||||||+|||+.+++|++|||||||||+|||||+|||||||||||||||||||||+||||||||||||+|+ +.|+|+
T Consensus        89 qLGDGRailLgE~~~~~g~~~dlqLKGaG~TPySR~gDGrAvLrssIREyL~SEAm~aLGIPTTRaLalv~t~~~~v~r~  168 (487)
T PF02696_consen   89 QLGDGRAILLGEVRDPDGQRWDLQLKGAGRTPYSRGGDGRAVLRSSIREYLCSEAMHALGIPTTRALALVTTGEEPVRRE  168 (487)
T ss_pred             ccCCcceEEeeeeecCCCcEEEEeccCCCCCCCccCCCCcchHHHHHHHHHHHHHHHhCCCCccceeEEEEcCCeeEEcC
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999 788888


Q ss_pred             cccCCCCCCCCceeEEeeeccceeeechhhhhhcCCCCHHHHHHHHHHHHHhhCCccc
Q 017506          280 MFYDGNPKEEPGAIVCRVAQSFLRFGSYQIHASRGQEDLDIVRTLADYAIRHHFRHIE  337 (370)
Q Consensus       280 ~~y~gn~~~EpgAIv~RvApShIRfGsFE~fa~r~~~d~~~Lr~LaDyvI~~hfP~~~  337 (370)
                             +.||||||||||+|||||||||+|+++  ++.+.|++|+||||++|||++.
T Consensus       169 -------~~ep~Avv~RvA~S~iR~GsFe~~~~~--~~~~~l~~L~dy~i~~~~pe~~  217 (487)
T PF02696_consen  169 -------TPEPGAVVTRVAPSHIRFGSFEYFAYR--GDPEGLRQLADYVIKRHYPEIQ  217 (487)
T ss_pred             -------CCCCceEEEeccccceeeeeeehhhhc--CCHHHHHHHHHHHHHHhCCccc
Confidence                   689999999999999999999999999  6899999999999999999765

>KOG2542 consensus Uncharacterized conserved protein (YdiU family) [Function unknown]

Probab=100.00  E-value=3.8e-42  Score=341.01  Aligned_cols=144  Identities=51%  Similarity=0.722  Sum_probs=123.7

Q ss_pred             ccceeecCCCceeEeeeccCCCCCCccCCCCccccchhhHHHHHHHhhhhcCCCCcceeEEEec-CCeeeeccccCCCCC
Q 017506          209 TLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTT-GKFVTRDMFYDGNPK  287 (370)
Q Consensus       209 lLGEv~~~~G~r~ELQLKGAG~TPYSR~gDGRAVLRSSIREyL~SEAMhaLGIPTTRALaLV~S-ge~V~Re~~y~gn~~  287 (370)
                      ++|++....|++||+||||+|+|||||++||||||||||||||||||||+||||||||++++.. +..++|.       +
T Consensus         2 l~gl~~t~tg~~~e~qlkgag~tpfsrfADgkavLrssirefLcseal~~lgipttra~a~~~legtvaqr~-------~   74 (500)
T KOG2542|consen    2 LLGLVCTATGERWELQLKGAGPTPFSRFADGKAVLRSSIREFLCSEALFHLGIPTTRAGACVTLEGTVAQRP-------K   74 (500)
T ss_pred             ccccCCCcccceeeeeeeccCCCchhhhccchHHhhhhHHHHHHHHHHhhcCCcchhhccccCCCccccccc-------c
Confidence            6788888999999999999999999999999999999999999999999999999999999988 5677676       7


Q ss_pred             CCCceeEEeeeccceeeechhhhhhcCCCCHHHHHHHHHHHHHhhCCcccccCCCCceecccCCCCCCccc--cCccccc
Q 017506          288 EEPGAIVCRVAQSFLRFGSYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNKSESLSFSTGDEDHSVVD--LTSNKYA  365 (370)
Q Consensus       288 ~EpgAIv~RvApShIRfGsFE~fa~r~~~d~~~Lr~LaDyvI~~hfP~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~  365 (370)
                      .||||||||+||||||||+|++|.++  .++..+.+|.|||++-.|-.......+-|.  ++.     +.|  .|+||||
T Consensus        75 ~epcaVvcr~apswIr~g~f~lf~~~--~~h~gl~~lsdyc~~~~fk~gd~f~s~~~~--~~~-----~gd~~~T~nrya  145 (500)
T KOG2542|consen   75 YEPCAVVCRVAPSWIRFGSFELFKSA--DEHTGLAGLSDYCNDIRFKLGDYFISSFYP--EIQ-----AGDASDTVNRYA  145 (500)
T ss_pred             ccceeEEEeecchhhhhhhhHHHhhH--hhhcccccccccchhhhcccCccccccccc--ccc-----cccchhhhhHHH
Confidence            99999999999999999999999999  688999999999998665444333333222  222     556  7999999


Q ss_pred             ccc
Q 017506          366 GNS  368 (370)
Q Consensus       366 ~~~  368 (370)
                      ||-
T Consensus       146 aff  148 (500)
T KOG2542|consen  146 AFF  148 (500)
T ss_pred             HHH
Confidence            973

>KOG2542 consensus Uncharacterized conserved protein (YdiU family) [Function unknown]

Probab=97.96  E-value=1.2e-06  Score=89.26  Aligned_cols=127  Identities=9%  Similarity=-0.107  Sum_probs=119.5

Q ss_pred             eeccCCCCCCccCCCCccccchhhHHHHHHHhhhhcCCCCcceeEEEecCCeeeeccccCCCCCCCCceeEEeeecccee
Q 017506          224 QLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLR  303 (370)
Q Consensus       224 QLKGAG~TPYSR~gDGRAVLRSSIREyL~SEAMhaLGIPTTRALaLV~Sge~V~Re~~y~gn~~~EpgAIv~RvApShIR  303 (370)
                      +|+|.+.|+++++.++.++.+++++++.+++-||-|++++++.||.-+...-+++.+.|.+++..|++.+      ++.+
T Consensus         1 ~l~gl~~t~tg~~~e~qlkgag~tpfsrfADgkavLrssirefLcseal~~lgipttra~a~~~legtva------qr~~   74 (500)
T KOG2542|consen    1 MLLGLVCTATGERWELQLKGAGPTPFSRFADGKAVLRSSIREFLCSEALFHLGIPTTRAGACVTLEGTVA------QRPK   74 (500)
T ss_pred             CccccCCCcccceeeeeeeccCCCchhhhccchHHhhhhHHHHHHHHHHhhcCCcchhhccccCCCcccc------cccc
Confidence            5899999999999999999999999999999999999999999999999999999999999999998877      8889


Q ss_pred             eechhhhhhcCCCCHHHHHHHHHHHHHhhCCcccccCCCCceecccCCCCCCc
Q 017506          304 FGSYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNKSESLSFSTGDEDHSV  356 (370)
Q Consensus       304 fGsFE~fa~r~~~d~~~Lr~LaDyvI~~hfP~~~~~~~~~~~~~~~~~~~~~~  356 (370)
                      ++...+.++.++.......-.+++.+.+|++.+...|-...+.|.+++++++.
T Consensus        75 ~epcaVvcr~apswIr~g~f~lf~~~~~h~gl~~lsdyc~~~~fk~gd~f~s~  127 (500)
T KOG2542|consen   75 YEPCAVVCRVAPSWIRFGSFELFKSADEHTGLAGLSDYCNDIRFKLGDYFISS  127 (500)
T ss_pred             ccceeEEEeecchhhhhhhhHHHhhHhhhcccccccccchhhhcccCcccccc
Confidence            99999999888778888899999999999999999999999999999998874

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00