Citrus Sinensis ID: 017528

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370
Protein Sequence
MMQLPLMDKQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHEWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLWGKSKEQKMVDKSCLPTQVDQKVMNSDQIKVMAAKSPSSPMFL
Secondary Structure (PSIPRED)
ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccHHHHHHHHHHHHHHHHcEEEEcccHHHHHHHHHHHcccEEEEEEcccccccccccccccccccccccccccccccccccHHHHHccccccHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHcHHHHHHHHHHHHHHHHccccEEEEccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHcccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHEHEHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccHEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHcccHHHccccccccccccccccccccccccccEcc
Coil and Loop (DISEMBL)
mmqlplmdkqrpYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAvewkkapplsflTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGaatlafyngpqlrllchhhifghhnsqqihghvssgktWIKGCFIMLSSNTSFGLWLVLQGFVmksypskllFTTLQCFLSSIQSFAIAIALerdphewvlgWNVRLLAVAYCGIIVTALTYYLQAWVIEKkgpvflamstpLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLWGkskeqkmvdksclptqvdqkvmnSDQIKVmaakspsspmfl
Flexible Loop (DISEMBL)
mmqlplmdkqrPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHEWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLWGKSKEQKMVDksclptqvdqkvmnSDQIKVmaakspsspmfl
Low Complexity Region (SEG)
MMQLPLMDKQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHEWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEiitlgrilggllligglYAVLWGKSKEQKMVDKSCLPTQVDQKVMNSDQIKVMAAKSPSSPMFL
Disordered region (IsUnstruct)
**********RPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHEWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLWGK****************************************
Disordered Region (DISOPRED)
************YLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLC*********************TWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHEWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLWG*************************************PMFL
Disordered Region (DISEMBL)
MMQLPLMDKQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHN*********SGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHEWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLWGKSKEQKMVDKSCLPTQVDQKVMNSDQIKVMA**********
Disordered Region (DISPRO)
****PLMDKQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLC*********************TWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHEWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLWGKSKE*************************************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MMQLPLMDKQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHEWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLWGKSKEQKMVDKSCLPTQVDQKVMNSDQIKVMAAKSPSSPMFL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	370	2.2.26 [Sep-21-2011]
Q9FGG3	359	WAT1-related protein At5g	yes	no	0.956	0.986	0.625	1e-111
Q6NMB7	343	WAT1-related protein At1g	no	no	0.872	0.941	0.487	3e-76
F4HZQ7	389	WAT1-related protein At1g	no	no	0.975	0.928	0.358	3e-61
Q9FL41	402	WAT1-related protein At5g	no	no	0.956	0.880	0.347	9e-61
Q9ZUS1	380	WAT1-related protein At2g	no	no	0.891	0.868	0.350	2e-60
Q9LPF1	370	WAT1-related protein At1g	no	no	0.902	0.902	0.338	3e-57
Q501F8	373	WAT1-related protein At4g	no	no	0.943	0.935	0.317	2e-56
Q9SUF1	384	WAT1-related protein At4g	no	no	0.959	0.924	0.332	1e-55
F4IJ08	394	WAT1-related protein At2g	no	no	0.902	0.847	0.343	7e-55
Q94AP3	389	Protein WALLS ARE THIN 1	no	no	0.975	0.928	0.322	5e-54

>sp|Q9FGG3|WTR45_ARATH WAT1-related protein At5g64700 OS=Arabidopsis thaliana GN=At5g64700 PE=2 SV=1

 Score =  400 bits (1028), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 224/358 (62%), Positives = 272/358 (75%), Gaps = 4/358 (1%)

Query: 7   MDKQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKK 66
           M+ ++PYL V +IQ IY  MFL+SKA FNGGMN FVF+FYRQAFAT+F+AP++   E K 
Sbjct: 3   MESKKPYLMVTIIQVIYTIMFLISKAVFNGGMNTFVFVFYRQAFATIFLAPLAFFFERKS 62

Query: 67  APPLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRME 126
           APPLSF+TF KIF LSL G+T SLDL GIAL YTSATLAAATT  LPAITFFLA+L  ME
Sbjct: 63  APPLSFVTFIKIFMLSLFGVTLSLDLNGIALSYTSATLAAATTASLPAITFFLALLFGME 122

Query: 127 VLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRL-LCHHHIFGH-HNSQQIHGHVSSG 184
            LK+K++ G AKLVGI +C+GG   LA Y GP L+L LC H   G  H  +   GHVS G
Sbjct: 123 RLKVKSIQGTAKLVGITVCMGGVIILAIYKGPLLKLPLCPHFYHGQEHPHRNNPGHVSGG 182

Query: 185 KT-WIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERD 243
            T W+KGC +M++SN  +GLWLVLQG V+K YPSKL FTTL C LSSIQSF IAIALERD
Sbjct: 183 STSWLKGCVLMITSNILWGLWLVLQGRVLKVYPSKLYFTTLHCLLSSIQSFVIAIALERD 242

Query: 244 PHEWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFL 303
              W LGWN+RL+AV YCG IVT + YYLQ+WVIEK+GPVFL+M TPL+L+FT ++S  L
Sbjct: 243 ISAWKLGWNLRLVAVIYCGFIVTGVAYYLQSWVIEKRGPVFLSMFTPLSLLFTLLSSAIL 302

Query: 304 LCEIITLGRILGGLLLIGGLYAVLWGKSKEQKMVDKSCLPTQVDQKVMNSDQIKVMAA 361
           LCEII+LG I+GGLLLI GLY VLWGKS+E+K      +  Q +  V+  +++KV+ +
Sbjct: 303 LCEIISLGSIVGGLLLIIGLYCVLWGKSREEKNSGDDKIDLQKENDVV-CNEVKVVIS 359

Arabidopsis thaliana (taxid: 3702)

>sp|Q6NMB7|WTR7_ARATH WAT1-related protein At1g43650 OS=Arabidopsis thaliana GN=At1g43650 PE=2 SV=1

 Score =  285 bits (730), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 162/332 (48%), Positives = 221/332 (66%), Gaps = 9/332 (2%)

Query: 6   LMDKQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWK 65
           +M + +  + ++ +Q +YAGM LLSK A + G N FVF+FYRQAFA L ++P +  +E  
Sbjct: 1   MMMEHKANMAMVFVQIVYAGMPLLSKVAISQGTNPFVFVFYRQAFAALALSPFAFFLESS 60

Query: 66  KAPPLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRM 125
           K+ PLSF+   KIFF+SL G+T SL+LY +A+  T+AT AAATTN +P+ITF LA+L R+
Sbjct: 61  KSSPLSFILLLKIFFISLCGLTLSLNLYYVAIENTTATFAAATTNAIPSITFVLALLFRL 120

Query: 126 EVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNSQQI-HGHVSSG 184
           E + LK   GVAK+ G ++ + GA   AF  GP L          H+NS  I +G V S 
Sbjct: 121 ETVTLKKSHGVAKVTGSMVGMLGALVFAFVKGPSL--------INHYNSSTIPNGTVPST 172

Query: 185 KTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDP 244
           K  +KG   ML++NT + LW+++Q  VMK YP+KL    LQC  S IQS   A+A+ R+P
Sbjct: 173 KNSVKGSITMLAANTCWCLWIIMQSKVMKEYPAKLRLVALQCLFSCIQSAVWAVAVNRNP 232

Query: 245 HEWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLL 304
             W + + + LL++AYCGI+VT LTY+LQ W IEKKGPVF A+ TPLALI T I S FL 
Sbjct: 233 SVWKIEFGLPLLSMAYCGIMVTGLTYWLQVWAIEKKGPVFTALYTPLALILTCIVSSFLF 292

Query: 305 CEIITLGRILGGLLLIGGLYAVLWGKSKEQKM 336
            E   LG + G +LL+ GLY  LWGK+KE+++
Sbjct: 293 KETFYLGSVGGAVLLVCGLYLGLWGKTKEEEI 324

Arabidopsis thaliana (taxid: 3702)

>sp|F4HZQ7|WTR5_ARATH WAT1-related protein At1g21890 OS=Arabidopsis thaliana GN=At1g21890 PE=2 SV=1

 Score =  236 bits (601), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 132/368 (35%), Positives = 203/368 (55%), Gaps = 7/368 (1%)

Query: 2   MQLPLMDKQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLA 61
           M   LM+  +PYL +I +Q  YAGM++++  +   GMN++V   YR A AT  +AP +L 
Sbjct: 1   MGRGLMNSLKPYLAMISMQFGYAGMYIITMVSLKHGMNHYVLAVYRHAIATAVIAPFALF 60

Query: 62  VEWKKAPPLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAV 121
            E K  P ++F  F +I  L  I      +LY + + YTSAT A+AT N LPAITF LA+
Sbjct: 61  HERKIRPKMTFRIFLQIALLGFIEPVLDQNLYYVGMTYTSATFASATANVLPAITFVLAI 120

Query: 122 LLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGP-----QLRLLCHHHIFGHHNSQQ 176
           + R+E +  K V  +AK+VG +I + GA  +  Y GP     +          G   S  
Sbjct: 121 IFRLESVNFKKVRSIAKVVGTVITVSGALLMTLYKGPIVDFIRFGGGGGGGSDGAGGSHG 180

Query: 177 IHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAI 236
             G  +  K WI G  ++L     +  + +LQ F +K YP++L  TTL C + +++  A+
Sbjct: 181 GAGAAAMDKHWIPGTLMLLGRTFGWAGFFILQSFTLKQYPAELSLTTLICLMGTLEGTAV 240

Query: 237 AIALERDPHEWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFT 296
           ++   RD   W +G++  L A AY G+I + + YY+Q  V+ ++GPVF+A   PL ++ T
Sbjct: 241 SLVTVRDLSAWKIGFDSNLFAAAYSGVICSGVAYYVQGVVMRERGPVFVATFNPLCVVIT 300

Query: 297 TIASVFLLCEIITLGRILGGLLLIGGLYAVLWGKSKEQKMV--DKSCLPTQVDQKVMNSD 354
               V +L E I LG ++G L +I GLY V+WGK K+++M   D+ C    +   V   D
Sbjct: 301 AALGVVVLSESIHLGSVIGTLFIIVGLYTVVWGKGKDKRMTDDDEDCKGLPIKSPVKPVD 360

Query: 355 QIKVMAAK 362
             K +AA+
Sbjct: 361 TGKGLAAE 368

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FL41|WTR38_ARATH WAT1-related protein At5g07050 OS=Arabidopsis thaliana GN=At5g07050 PE=2 SV=1

 Score =  234 bits (597), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 125/360 (34%), Positives = 211/360 (58%), Gaps = 6/360 (1%)

Query: 7   MDKQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKK 66
           +   +PY  +I +Q  YAGM +++K + N GM+++V + YR A AT  +AP +   E K 
Sbjct: 13  LTSSKPYFAMISLQFGYAGMNIITKISLNTGMSHYVLVVYRHAIATAVIAPFAFFFERKA 72

Query: 67  APPLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRME 126
            P ++F  F ++F L L+G     + Y + L YTS T + A +N LPA+TF LAVL RME
Sbjct: 73  QPKITFSIFMQLFILGLLGPVIDQNFYYMGLKYTSPTFSCAMSNMLPAMTFILAVLFRME 132

Query: 127 VLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIF---GHHNSQQIHGHVSS 183
           +L LK +   AK+ G ++ + GA  +  Y GP + L    ++      H +     + SS
Sbjct: 133 MLDLKKLWCQAKIAGTVVTVAGAMLMTIYKGPIVELFWTKYMHIQDSSHANTTSSKNSSS 192

Query: 184 GKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPS-KLLFTTLQCFLSSIQSFAIAIALER 242
            K ++KG  +++ +  ++    VLQ  ++K+Y   +L  TTL CF+ ++Q+ A+   +E 
Sbjct: 193 DKEFLKGSILLIFATLAWASLFVLQAKILKTYAKHQLSLTTLICFIGTLQAVAVTFVMEH 252

Query: 243 DPHEWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVF 302
           +P  W +GW++ LLA AY GI+ ++++YY+Q  V++K+GPVF    +PL ++   +   F
Sbjct: 253 NPSAWRIGWDMNLLAAAYSGIVASSISYYVQGIVMKKRGPVFATAFSPLMMVIVAVMGSF 312

Query: 303 LLCEIITLGRILGGLLLIGGLYAVLWGKSKEQKMVDKSCLPTQVDQKVMNSDQIKVMAAK 362
           +L E I LG ++G +L++ GLYAVLWGK KE ++    C   ++D     ++ ++   +K
Sbjct: 313 VLAEKIFLGGVIGAVLIVIGLYAVLWGKQKENQVTI--CELAKIDSNSKVTEDVEANGSK 370

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZUS1|WTR13_ARATH WAT1-related protein At2g37460 OS=Arabidopsis thaliana GN=At2g37460 PE=2 SV=1

 Score =  233 bits (594), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 121/345 (35%), Positives = 196/345 (56%), Gaps = 15/345 (4%)

Query: 7   MDKQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKK 66
           M+K RP+++++++Q   AGM +LSKA  N GM+N+V + YR A AT+ +AP +   + K 
Sbjct: 10  MEKARPFISMVVLQVGLAGMDILSKAVLNKGMSNYVLVVYRHAVATIVMAPFAFYFDKKV 69

Query: 67  APPLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRME 126
            P ++ + F KI  L L+      +LY + + YT+AT A A  N LPAITF LA +  +E
Sbjct: 70  RPKMTLMIFFKISLLGLLEPVIDQNLYYLGMKYTTATFATAMYNVLPAITFVLAYIFGLE 129

Query: 127 VLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNS-QQIHGHVSSGK 185
            +KL+ +    K+VG L  +GGA  +    GP L L     +  H+ +   IH  +    
Sbjct: 130 RVKLRCIRSTGKVVGTLATVGGAMIMTLVKGPVLDLFWTKGVSAHNTAGTDIHSAIKGAV 189

Query: 186 TWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALER-DP 244
               GCF       S+  +++LQ   +++YP++L  T   C + +I+  A+A+ +E+ +P
Sbjct: 190 LVTIGCF-------SYACFMILQAITLRTYPAELSLTAWICLMGTIEGTAVALVMEKGNP 242

Query: 245 HEWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLL 304
             W +GW+ +LL   Y GI+ +AL YY+   V++ +GPVF+   +PL +I   I S  + 
Sbjct: 243 SAWAIGWDTKLLTATYSGIVCSALAYYVGGVVMKTRGPVFVTAFSPLCMIIVAIMSTIIF 302

Query: 305 CEIITLGRILGGLLLIGGLYAVLWGKSKEQK------MVDKSCLP 343
            E + LGR+LG +++  GLY V+WGK K+ K      + D+S  P
Sbjct: 303 AEQMYLGRVLGAVVICAGLYLVIWGKGKDYKYNSTLQLDDESAQP 347

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LPF1|WTR8_ARATH WAT1-related protein At1g44800 OS=Arabidopsis thaliana GN=At1g44800 PE=1 SV=1

 Score =  222 bits (566), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 119/352 (33%), Positives = 202/352 (57%), Gaps = 18/352 (5%)

Query: 7   MDKQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKK 66
           M+K +P L +I +Q  YAGM++++  +F  GM+++V   YR   AT+ +AP +L  E K 
Sbjct: 6   MEKIKPILAIISLQFGYAGMYIITMVSFKHGMDHWVLATYRHVVATVVMAPFALMFERKI 65

Query: 67  APPLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRME 126
            P ++   F ++  L ++      +LY I L  TSA+  +A TN LPA+TF LA++ R+E
Sbjct: 66  RPKMTLAIFWRLLALGILEPLMDQNLYYIGLKNTSASYTSAFTNALPAVTFILALIFRLE 125

Query: 127 VLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNSQQIHGHVSS--- 183
            +  + V  VAK+VG +I +GGA  +  Y GP + +     +   HNS   HG  SS   
Sbjct: 126 TVNFRKVHSVAKVVGTVITVGGAMIMTLYKGPAIEI-----VKAAHNS--FHGGSSSTPT 178

Query: 184 GKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERD 243
           G+ W+ G   ++ S +++  + +LQ + +K YP++L   TL C + +I +   ++ + RD
Sbjct: 179 GQHWVLGTIAIMGSISTWAAFFILQSYTLKVYPAELSLVTLICGIGTILNAIASLIMVRD 238

Query: 244 PHEWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFL 303
           P  W +G +   LA  Y G++ + + YY+Q+ VI+++GPVF    +P+ +I T      +
Sbjct: 239 PSAWKIGMDSGTLAAVYSGVVCSGIAYYIQSIVIKQRGPVFTTSFSPMCMIITAFLGALV 298

Query: 304 LCEIITLGRILGGLLLIGGLYAVLWGKSKEQKMVDKSCLPTQVDQKVMNSDQ 355
           L E I LG I+G + ++ GLY+V+WGKSK++           +D+K++   Q
Sbjct: 299 LAEKIHLGSIIGAVFIVLGLYSVVWGKSKDEV--------NPLDEKIVAKSQ 342

Arabidopsis thaliana (taxid: 3702)

>sp|Q501F8|WTR32_ARATH WAT1-related protein At4g08300 OS=Arabidopsis thaliana GN=At4g08300 PE=2 SV=1

 Score =  220 bits (560), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 117/369 (31%), Positives = 203/369 (55%), Gaps = 20/369 (5%)

Query: 7   MDKQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKK 66
           MDK +P + +I +Q  YAGM++++  +F  GMN+++   YR   AT+ +AP +L +E K 
Sbjct: 6   MDKLKPIIAIISLQFGYAGMYIITMVSFKHGMNHWILATYRHVVATIVIAPFALILERKI 65

Query: 67  APPLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRME 126
            P +++  F +I  L  +      +LY I +  TSAT ++A  N LPAITF +AV+ R+E
Sbjct: 66  RPKMTWPLFLRILALGFLEPLLDQNLYYIGMKATSATYSSAFVNALPAITFIMAVIFRIE 125

Query: 127 VLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNSQQIHGHVSSGKT 186
            + LK    +AK++G  I +GGA  +  Y GP + L    H   H  S       ++ + 
Sbjct: 126 TVNLKKTRSLAKVIGTAITVGGAMVMTLYKGPAIELFKTAHSSLHGGSSGTSSE-TTDQN 184

Query: 187 WIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHE 246
           W+ G   ++ S T++  + +LQ F +K YP++L      C + ++ +   ++ + RD   
Sbjct: 185 WVTGTLAVMGSITTWAGFFILQSFTLKKYPAELSLVMWICAMGTVLNTIASLIMVRDVSA 244

Query: 247 WVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCE 306
           W +G +   LA  Y G++ + + YY+Q+ VI ++GPVF    +P+ +I T    V +L E
Sbjct: 245 WKVGMDSGTLAAVYSGVVCSGMAYYIQSIVIRERGPVFTTSFSPMCMIITAFLGVLVLAE 304

Query: 307 IITLGRILGGLLLIGGLYAVLWGKSK------EQKM-------------VDKSCLPTQVD 347
            I LG I+G + ++ GLY+V+WGK+K      E+K+             V+   + ++V+
Sbjct: 305 KIHLGSIIGAIFIVFGLYSVVWGKAKDEVISVEEKIGMQELPITNTSTKVEGGGITSEVN 364

Query: 348 QKVMNSDQI 356
           + V N+ Q+
Sbjct: 365 EGVTNNTQV 373

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SUF1|WTR31_ARATH WAT1-related protein At4g08290 OS=Arabidopsis thaliana GN=At4g08290 PE=2 SV=1

 Score =  217 bits (552), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 122/367 (33%), Positives = 199/367 (54%), Gaps = 12/367 (3%)

Query: 7   MDKQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKK 66
           M K RPYL +I +Q   AG +++  A  N G N +V I YR   A L +AP +L  E K 
Sbjct: 8   MHKLRPYLLMIFLQFGAAGTYIVIMATLNQGQNRYVVIVYRNLVAALVLAPFALIFERKV 67

Query: 67  APPLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRME 126
            P ++     KI  L  +          + +  TSAT  +A  N LP++TF +A +LRME
Sbjct: 68  RPKMTLSVLWKIMALGFLEPVLDQGFGYLGMNMTSATYTSAIMNILPSVTFIIAWILRME 127

Query: 127 VLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNSQQIHGHVSSGK- 185
            + +  V   AK++G L+ +GGA  +  Y GP + L      + + N  Q +GH ++ + 
Sbjct: 128 KVNIAEVRSKAKIIGTLVGLGGALVMTLYKGPLIPLP-----WSNPNMDQQNGHTNNSQD 182

Query: 186 --TWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERD 243
              W+ G  ++L    ++  + VLQ   +K+YP+ L  + L C   ++QSFA+A+ +ER 
Sbjct: 183 HNNWVVGTLLILLGCVAWSGFYVLQSITIKTYPADLSLSALICLAGAVQSFAVALVVERH 242

Query: 244 PHEWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFL 303
           P  W +GW+ RL A  Y GI+ + +TYY+Q  V++ +GPVF+    PL +I   + + F+
Sbjct: 243 PSGWAVGWDARLFAPLYTGIVSSGITYYVQGMVMKTRGPVFVTAFNPLCMILVALIASFI 302

Query: 304 LCEIITLGRILGGLLLIGGLYAVLWGKSKEQKMVDKSCLPTQVDQKV----MNSDQIKVM 359
           L E I  G ++GG ++  GLY V+WGK K+ ++     L     Q++     + D  K++
Sbjct: 303 LHEQIHFGCVIGGAVIAAGLYMVVWGKGKDYEVSGLDILEKNSLQELPITTKSEDDNKLV 362

Query: 360 AAKSPSS 366
           ++ S +S
Sbjct: 363 SSISDNS 369

Arabidopsis thaliana (taxid: 3702)

>sp|F4IJ08|WTR15_ARATH WAT1-related protein At2g40900 OS=Arabidopsis thaliana GN=At2g40900 PE=2 SV=1

 Score =  214 bits (546), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 121/352 (34%), Positives = 203/352 (57%), Gaps = 18/352 (5%)

Query: 2   MQLPLMDKQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLA 61
           M L + +  +PY  ++ +Q  YAGM L++K   + GM+++V + YR AFAT  +AP +L 
Sbjct: 1   MGLRMSESAKPYFAMVCLQFGYAGMNLVTKTVLDRGMSHYVLVAYRNAFATAAIAPFALL 60

Query: 62  VEWKKAPPLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAV 121
            E K    ++F  F +IF L+L+G     +LY I L  TS T ++A +N +PAIT  LA 
Sbjct: 61  SERKVRSKMTFPIFMRIFLLALLGPVIDQNLYYIGLKLTSPTFSSAVSNIVPAITIILAT 120

Query: 122 LLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNSQQIHGHV 181
           L RME ++++ V  + K++G L+ + G+  + FY GP +     H               
Sbjct: 121 LFRMEKVEMRKVRCLVKVMGTLVTVVGSILMIFYKGPFINFFRSHLT-----------AA 169

Query: 182 SSGKT--WIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIA 239
           SS  T  ++K    +L ++ S+  + VLQ   +K Y + L  +T+ CF+ ++QS A+A  
Sbjct: 170 SSPPTADYLKAAVFLLLASLSWASFFVLQAATLKKYSAHLSMSTMVCFMGTLQSLALAFV 229

Query: 240 LERDPHEWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIA 299
           +E +P    +G+++ LLA AY GI+ +++ YY+Q  ++++KGPVF+    PL ++  +I 
Sbjct: 230 MEHNPSALNIGFDMNLLASAYAGIMSSSIAYYVQGLMMQRKGPVFVTAFNPLIVVIVSIM 289

Query: 300 SVFLLCEIITLGRILGGLLLIGGLYAVLWGKSKEQKMVDKSCLPTQVDQKVM 351
           S F+L + I LG ++G ++L+ G+YAVLWGK      VD     T+ +  V+
Sbjct: 290 SFFVLGQGIYLGGVIGVVVLMVGVYAVLWGKH-----VDDDGEETRHEDNVV 336

Arabidopsis thaliana (taxid: 3702)

>sp|Q94AP3|WAT1_ARATH Protein WALLS ARE THIN 1 OS=Arabidopsis thaliana GN=WAT1 PE=1 SV=1

 Score =  212 bits (539), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 118/366 (32%), Positives = 201/366 (54%), Gaps = 5/366 (1%)

Query: 8   DKQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKA 67
           +K + ++ ++ +Q  YAG  ++S+AA N G++  VF  YR   A L + P +  +E K+ 
Sbjct: 16  EKLQLHIAMLTLQFGYAGFHVVSRAALNMGISKLVFPVYRNIIALLLLLPFAYFLEKKER 75

Query: 68  PPLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEV 127
           P ++     + FFL+LIGIT +   Y + L  TS T A++  N +PAITF +A LLR+E 
Sbjct: 76  PAITLNFLIQFFFLALIGITANQGFYLLGLDNTSPTFASSMQNSVPAITFLMAALLRIEK 135

Query: 128 LKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHH---HIFGHHNSQQIHGHVSSG 184
           +++    G++K++G  +C+ GA+ +  Y GP +     H   H+   +++       ++ 
Sbjct: 136 VRINRRDGISKILGTALCVAGASVITLYKGPTIYTPASHLHAHLLTTNSAVLAPLGNAAP 195

Query: 185 KTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDP 244
           K W  GC  ++    S+  WLV Q  V+KSYP++L  T+  CF   IQ   IA   ERD 
Sbjct: 196 KNWTLGCIYLIGHCLSWSGWLVFQAPVLKSYPARLSVTSYTCFFGIIQFLIIAAFCERDS 255

Query: 245 HEWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLL 304
             WV      L  + Y GI+ + + + +Q W I++ GPVF+A+  P+  +   I +   L
Sbjct: 256 QAWVFHSGWELFTILYAGIVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASIAL 315

Query: 305 CEIITLGRILGGLLLIGGLYAVLWGKSKEQKM--VDKSCLPTQVDQKVMNSDQIKVMAAK 362
            E   LG I+G +L+I GLY VL+GKS+E+K   ++K+ + +  +  +  +   +     
Sbjct: 316 GEEFYLGGIIGAVLIIAGLYFVLYGKSEERKFAALEKAAIQSSAEHGIERAPVSRNSIKS 375

Query: 363 SPSSPM 368
           S ++P+
Sbjct: 376 SITTPL 381

Required for secondary wall formation in fibers, especially in short days conditions. Promotes indole metabolism and transport (e.g. tryptophan, neoglucobrassicin and auxin (indole-3-acetic acid)). May prevent salicylic-acid (SA) accumulation.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	370
224126779	361	mtn21-like protein [Populus trichocarpa]	0.970	0.994	0.657	1e-139
255585897	357	Auxin-induced protein 5NG4, putative [Ri	0.935	0.969	0.714	1e-135
224060451	328	mtn21-like protein [Populus trichocarpa]	0.886	1.0	0.692	1e-126
359807403	341	uncharacterized protein LOC100804562 [Gl	0.883	0.958	0.701	1e-125
359806088	342	uncharacterized protein LOC100775854 [Gl	0.878	0.950	0.696	1e-123
356518736	342	PREDICTED: auxin-induced protein 5NG4-li	0.924	1.0	0.653	1e-123
357519781	349	Auxin-induced protein 5NG4 [Medicago tru	0.886	0.939	0.687	1e-122
356525576	342	PREDICTED: auxin-induced protein 5NG4-li	0.878	0.950	0.684	1e-121
357464515	340	Auxin-induced protein 5NG4 [Medicago tru	0.883	0.961	0.679	1e-120
225431388	360	PREDICTED: auxin-induced protein 5NG4 [V	0.972	1.0	0.675	1e-119

>gi|224126779|ref|XP_002329471.1| mtn21-like protein [Populus trichocarpa] gi|222870151|gb|EEF07282.1| mtn21-like protein [Populus trichocarpa]

 Score =  500 bits (1288), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 236/359 (65%), Positives = 284/359 (79%)

Query: 7   MDKQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKK 66
           M +++PYL V+L+Q+IY GMF+LSKAAFNGGMNN+VF+FYRQA ATLF+AP +   EWK 
Sbjct: 1   MGEKKPYLAVLLVQSIYGGMFMLSKAAFNGGMNNYVFVFYRQAAATLFLAPFAFYFEWKN 60

Query: 67  APPLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRME 126
            P LS +TFCKIFFLSL GI+  LD++GI ++Y SATLAAA +NCLP +TFFLA+LLRME
Sbjct: 61  RPTLSLVTFCKIFFLSLFGISLCLDIFGIGIVYASATLAAAISNCLPVVTFFLALLLRME 120

Query: 127 VLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNSQQIHGHVSSGKT 186
           VLKL++V G+AK+VGI+ CI GA TLA Y GP   LLC HH+F  HNS  I  HV S +T
Sbjct: 121 VLKLRSVSGIAKIVGIIACIAGAITLALYKGPHFNLLCLHHLFESHNSHGIVSHVPSSQT 180

Query: 187 WIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHE 246
            IKGCF++  SN  +GLWLVLQG V+K YPSKLLF TLQCFLS+IQ FAIAI  ERDP E
Sbjct: 181 RIKGCFLLFVSNILWGLWLVLQGRVLKDYPSKLLFITLQCFLSTIQLFAIAIGFERDPRE 240

Query: 247 WVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCE 306
           W LGWNVRLLAVAYCGI+VT +T+YLQAW+IEKKGPVFLAMSTP+ L+FT   S  LLCE
Sbjct: 241 WELGWNVRLLAVAYCGIVVTGVTFYLQAWIIEKKGPVFLAMSTPVTLVFTMFFSAILLCE 300

Query: 307 IITLGRILGGLLLIGGLYAVLWGKSKEQKMVDKSCLPTQVDQKVMNSDQIKVMAAKSPS 365
           IITLG +LGGL+L+ GLY+VLWGKSKE+K  D  CL  +VD++     Q+  +  K PS
Sbjct: 301 IITLGSVLGGLMLVAGLYSVLWGKSKEEKTNDAKCLKAEVDKERSELKQVVPVETKGPS 359

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255585897|ref|XP_002533622.1| Auxin-induced protein 5NG4, putative [Ricinus communis] gi|223526496|gb|EEF28766.1| Auxin-induced protein 5NG4, putative [Ricinus communis]

 Score =  486 bits (1251), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 250/350 (71%), Positives = 303/350 (86%), Gaps = 4/350 (1%)

Query: 7   MDKQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKK 66
           M +++ YL V+L+Q+IYAGMFL+SKAAFNGGMNNFVF+FYRQA AT+F+AP++L +E KK
Sbjct: 1   MGEKKAYLAVLLVQSIYAGMFLISKAAFNGGMNNFVFVFYRQAAATIFLAPLALFLERKK 60

Query: 67  APPLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRME 126
           APP+SF+TFCK+F LSL G+T SLD+YG+AL+YTSATLAAATTNCLP ITFFLA+LLRME
Sbjct: 61  APPMSFVTFCKLFMLSLCGVTLSLDIYGLALVYTSATLAAATTNCLPVITFFLALLLRME 120

Query: 127 VLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNSQQIHGHVSSGKT 186
           VLKL+T  G+AKL+GI+ C+GGAATLAF+ GP  R +CHHH+FG H+SQ   GHVSSGKT
Sbjct: 121 VLKLRTSSGIAKLIGIVACMGGAATLAFFKGPHFRQVCHHHLFGTHDSQGFQGHVSSGKT 180

Query: 187 WIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHE 246
           W+KGCF+ML SNT +GLWLVLQ  V+KSYPSKLLFTTLQCFLSS+QSF IAIAL RDPHE
Sbjct: 181 WVKGCFLMLMSNTCWGLWLVLQVKVLKSYPSKLLFTTLQCFLSSVQSFVIAIALVRDPHE 240

Query: 247 WVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCE 306
           W+LGWNV+LLAV YCGI+VT +T+Y+QAW+IE+KGPVFLAMSTPL LIFT   S  LLCE
Sbjct: 241 WMLGWNVKLLAVLYCGIMVTGVTFYIQAWIIEEKGPVFLAMSTPLNLIFTVFCSAILLCE 300

Query: 307 IITLGRILGGLLLIGGLYAVLWGKSKEQKMVDKSCLPTQVDQKVMNSDQI 356
           II+LG +LGGLLL+ GLY+VLWGKSKE+K+    C+ TQVD++     Q+
Sbjct: 301 IISLGSLLGGLLLVAGLYSVLWGKSKEEKI----CMTTQVDKECSELKQV 346

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224060451|ref|XP_002300206.1| mtn21-like protein [Populus trichocarpa] gi|222847464|gb|EEE85011.1| mtn21-like protein [Populus trichocarpa]

 Score =  457 bits (1176), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 227/328 (69%), Positives = 271/328 (82%)

Query: 7   MDKQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKK 66
           M +++PYL V+L+Q+IY GMF++SKAAFNGGMNN+VF+FYRQA ATLF+AP +   EWK 
Sbjct: 1   MGEKKPYLAVLLVQSIYGGMFMISKAAFNGGMNNYVFVFYRQAAATLFLAPFAFYFEWKN 60

Query: 67  APPLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRME 126
            PPLSF+TFCKIFFL+L GI+F LD++GI +IY +ATLAAA +NCLP ITFFLA+LLRME
Sbjct: 61  RPPLSFVTFCKIFFLALFGISFCLDIFGIGIIYATATLAAAISNCLPVITFFLALLLRME 120

Query: 127 VLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNSQQIHGHVSSGKT 186
           VLK KTV G+AK+ GI+ CI GAATLA Y GP   L+C  H+ G HNSQ I  H+ S +T
Sbjct: 121 VLKFKTVSGIAKIAGIVACIAGAATLALYKGPHFNLMCLQHLSGSHNSQGIISHIPSSQT 180

Query: 187 WIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHE 246
            IKGCF++  SN  +GLWLVLQ  V+K+YPSKLLF TLQCFLS+IQ FAIA+A ERDP E
Sbjct: 181 RIKGCFLLFLSNILWGLWLVLQVRVLKNYPSKLLFITLQCFLSTIQLFAIAVAAERDPRE 240

Query: 247 WVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCE 306
           W LGWNVRLLAVAYCGI+VT +T+YLQAWVIEKKGPVFLAMSTP  L+FT I S  LLCE
Sbjct: 241 WELGWNVRLLAVAYCGIVVTGVTFYLQAWVIEKKGPVFLAMSTPFTLVFTMIFSSILLCE 300

Query: 307 IITLGRILGGLLLIGGLYAVLWGKSKEQ 334
            ITLG +LGGL+L+GGLY+VLWGK KE+
Sbjct: 301 TITLGSVLGGLMLVGGLYSVLWGKRKEE 328

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359807403|ref|NP_001241386.1| uncharacterized protein LOC100804562 [Glycine max] gi|255635558|gb|ACU18129.1| unknown [Glycine max]

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 230/328 (70%), Positives = 267/328 (81%), Gaps = 1/328 (0%)

Query: 7   MDKQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKK 66
           M    PYL V+L+QAIYA MFLLSKAAF+ GMNNF+F+FYRQA AT+F+ P +   EWK 
Sbjct: 1   MKGNNPYLIVVLVQAIYAAMFLLSKAAFDHGMNNFIFVFYRQAVATIFLTPFTFFFEWKT 60

Query: 67  APPLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRME 126
           APP+ F TFCKIFFLSL GIT SLD+YGI LIYTSATLAAATTNCLPAITFFLA LLR+E
Sbjct: 61  APPMPFRTFCKIFFLSLFGITLSLDIYGIGLIYTSATLAAATTNCLPAITFFLAFLLRIE 120

Query: 127 VLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNSQQIHGHVSSGKT 186
            LK+KT PG+AKL+G++ C+ GAAT AFY GP L+ L H H+  +H S Q  GH  SG  
Sbjct: 121 SLKIKTTPGIAKLIGVVACLAGAATFAFYKGPSLKFLSHFHLLDYHKSIQHQGHAQSG-A 179

Query: 187 WIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHE 246
           WIKGCF+ML SNT FGLWLVLQ F++K YPSKLLFTT+QCFLSSIQSF IA+A+ERD  +
Sbjct: 180 WIKGCFLMLLSNTFFGLWLVLQTFIIKGYPSKLLFTTIQCFLSSIQSFVIALAVERDIEQ 239

Query: 247 WVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCE 306
           W LGWNVRLLAV YCGI+VT ++YYLQ WVIEKKGPVFLAMSTPLALI T  AS  +L E
Sbjct: 240 WKLGWNVRLLAVLYCGIMVTGVSYYLQTWVIEKKGPVFLAMSTPLALIITIFASAAVLGE 299

Query: 307 IITLGRILGGLLLIGGLYAVLWGKSKEQ 334
           II+LG +LGG +LI GLY+VLWGK++E 
Sbjct: 300 IISLGSLLGGFVLILGLYSVLWGKNREH 327

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359806088|ref|NP_001241185.1| uncharacterized protein LOC100775854 [Glycine max] gi|255642008|gb|ACU21271.1| unknown [Glycine max]

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 227/326 (69%), Positives = 272/326 (83%), Gaps = 1/326 (0%)

Query: 9   KQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAP 68
            ++PYL  ILI+AIYAGMFLLSKAAF+ GMNNF+F+FYRQ  AT+F+ P +   EWK AP
Sbjct: 4   NKKPYLVAILIEAIYAGMFLLSKAAFDHGMNNFIFVFYRQTAATIFLIPFAFFFEWKTAP 63

Query: 69  PLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVL 128
           PLSF+TFCKIFFLS +GIT SLD+YGI LIYTSATLAAATTNCLP ITFFLA++LR+E L
Sbjct: 64  PLSFVTFCKIFFLSFLGITASLDIYGIGLIYTSATLAAATTNCLPVITFFLALILRIEDL 123

Query: 129 KLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNSQQIHGHVSSGKTWI 188
           K+K+  GVAKLVG++ C  G+A LAF+ GP L LL H+H+ G+H +QQ  G V+SG +WI
Sbjct: 124 KVKSARGVAKLVGVVACFTGSAILAFFKGPHLELLSHYHLLGYHKNQQHLGRVASG-SWI 182

Query: 189 KGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHEWV 248
           KGCF++L SNT +G+WLVLQ +V+K YPSKLL TTLQCFLSSIQS +IA+A+ERD  +W 
Sbjct: 183 KGCFLLLLSNTFWGMWLVLQTYVIKEYPSKLLLTTLQCFLSSIQSLSIALAVERDIDQWK 242

Query: 249 LGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEII 308
           LGWNVRLLAVAYCGI+VT +TYYLQ WVIEKKGPVFLAM+TPLALI T  +S  LL EII
Sbjct: 243 LGWNVRLLAVAYCGIMVTGVTYYLQTWVIEKKGPVFLAMATPLALIMTIFSSAILLGEII 302

Query: 309 TLGRILGGLLLIGGLYAVLWGKSKEQ 334
           TLG +LGG+ L+ GLY VLWGKS+EQ
Sbjct: 303 TLGSLLGGITLVIGLYCVLWGKSREQ 328

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356518736|ref|XP_003528034.1| PREDICTED: auxin-induced protein 5NG4-like [Glycine max]

 Score =  447 bits (1149), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 226/346 (65%), Positives = 267/346 (77%), Gaps = 4/346 (1%)

Query: 7   MDKQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKK 66
           M    PYL VILIQ IYA M LLSK AF+ GM++F+F+FYRQA ATLF+ P +   EWK 
Sbjct: 1   MKGNNPYLVVILIQTIYAAMILLSKVAFDHGMDSFIFVFYRQAAATLFLTPFTFFFEWKT 60

Query: 67  APPLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRME 126
           APP+ F TFCKIFF+SL GIT +L++YGIALIYTS TLAAAT+N LPAITFFLA+LLR+E
Sbjct: 61  APPMPFWTFCKIFFISLFGITLTLEIYGIALIYTSVTLAAATSNSLPAITFFLALLLRIE 120

Query: 127 VLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNSQQIHGHVSSGKT 186
            LK+KT PG+ KL+GI+ C+ GAATLAFY GP L+ L H+H+  +H + Q  G   SG  
Sbjct: 121 SLKIKTTPGIVKLIGIVACLAGAATLAFYKGPPLKFLSHYHLLDYHKTLQHQGRAPSG-A 179

Query: 187 WIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHE 246
           WIKGCF+M+ SNT FGLW VLQ F++K YPSKLLFTT+QCFLSSIQS  IA+A+ERD  +
Sbjct: 180 WIKGCFLMILSNTCFGLWFVLQAFIIKVYPSKLLFTTIQCFLSSIQSLVIALAVERDIEQ 239

Query: 247 WVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCE 306
           W LGWN RLLAV YCGI+VT +TYYLQ WVIEKKGPVFLAMSTPL LI TT AS  +L E
Sbjct: 240 WKLGWNARLLAVLYCGIMVTGVTYYLQTWVIEKKGPVFLAMSTPLVLIITTFASATILGE 299

Query: 307 IITLGRILGGLLLIGGLYAVLWGKSKEQKMVDKSCLPTQVDQKVMN 352
           II+LG +LGG +LI GLY+VLWGKSKE  M   S     V+Q   N
Sbjct: 300 IISLGSLLGGFILILGLYSVLWGKSKEHHMPKVSL---DVEQTSSN 342

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357519781|ref|XP_003630179.1| Auxin-induced protein 5NG4 [Medicago truncatula] gi|355524201|gb|AET04655.1| Auxin-induced protein 5NG4 [Medicago truncatula]

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 227/330 (68%), Positives = 270/330 (81%), Gaps = 2/330 (0%)

Query: 7   MDKQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKK 66
           M +  PYL V++IQAIYA MFLLSKAAF+ GMNNFVF+FYRQ+ AT+F+ P +L  EWK 
Sbjct: 1   MKRNNPYLVVVIIQAIYAAMFLLSKAAFDHGMNNFVFVFYRQSAATIFLTPFALFFEWKS 60

Query: 67  APPLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRME 126
           APPL F TFCKIFF+S IGIT SLD+YGIALI TSATLAAATTNCLP ITFFLA++LR+E
Sbjct: 61  APPLPFTTFCKIFFISFIGITSSLDIYGIALINTSATLAAATTNCLPVITFFLALILRIE 120

Query: 127 VLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFG-HHNSQQIHGHV-SSG 184
           VL++KT  G AKL G++ C+GGAATLAFY GPQL LL H H  G +H +QQ  GHV  SG
Sbjct: 121 VLRVKTAAGAAKLAGVVACLGGAATLAFYKGPQLELLSHFHFLGNYHKTQQHQGHVLLSG 180

Query: 185 KTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDP 244
            +WIKGCF+ML SNT +G+WLVLQ F++K YPSKLL TTLQCFLSSIQS  +A+A+ERD 
Sbjct: 181 SSWIKGCFLMLLSNTFWGMWLVLQTFIIKGYPSKLLLTTLQCFLSSIQSLVVALAVERDF 240

Query: 245 HEWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLL 304
            +W LGWN+RL+AV YCGI+VT +TYYLQ WVIEK+GPVFLAMSTPLALI T ++S  LL
Sbjct: 241 EQWKLGWNIRLVAVLYCGIMVTGVTYYLQTWVIEKRGPVFLAMSTPLALIMTMLSSAILL 300

Query: 305 CEIITLGRILGGLLLIGGLYAVLWGKSKEQ 334
            EI++LG +LG   L+ GLY VLWGKS+EQ
Sbjct: 301 GEILSLGSLLGSCGLVLGLYFVLWGKSREQ 330

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356525576|ref|XP_003531400.1| PREDICTED: auxin-induced protein 5NG4-like [Glycine max]

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 223/326 (68%), Positives = 269/326 (82%), Gaps = 1/326 (0%)

Query: 9   KQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAP 68
            ++PYL VILI+AIYA MFLLSKAAF+ GMNNF+F+FYRQ  AT+F+ P +   EWK AP
Sbjct: 4   SKKPYLVVILIEAIYAAMFLLSKAAFDHGMNNFIFVFYRQTTATIFLIPFAFFFEWKTAP 63

Query: 69  PLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVL 128
           PL+ +TFCKIFFLS +GI+ SLD+YGI LIYTSATLAAATTNCLP ITFFLA++LR+E L
Sbjct: 64  PLTLVTFCKIFFLSFLGISASLDIYGIGLIYTSATLAAATTNCLPVITFFLALILRIENL 123

Query: 129 KLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNSQQIHGHVSSGKTWI 188
           K+ +  GVAKLVG++ C+ G+A LAFY GP L +L H+H+ G+H +QQ  G V+SG TWI
Sbjct: 124 KVTSTSGVAKLVGVVACLTGSAILAFYKGPHLEVLSHYHVLGYHKNQQHLGRVASG-TWI 182

Query: 189 KGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHEWV 248
           KGCF++L SNT +G+WLVLQ +V+K YPSKLL TTLQCFLSSIQS  IA+A+ERD  +W 
Sbjct: 183 KGCFLLLLSNTFWGMWLVLQTYVIKGYPSKLLLTTLQCFLSSIQSLGIALAVERDIEQWK 242

Query: 249 LGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEII 308
           LGWNVRLLAV YCGI+VT +TYYLQ WVIEKKGPVFLAM+TPLALI T  +S  LL EII
Sbjct: 243 LGWNVRLLAVVYCGIMVTGVTYYLQTWVIEKKGPVFLAMATPLALIMTIFSSAVLLGEII 302

Query: 309 TLGRILGGLLLIGGLYAVLWGKSKEQ 334
           TLG +LGG+ L+ GLY VLWGKS+EQ
Sbjct: 303 TLGSLLGGIALVIGLYCVLWGKSREQ 328

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357464515|ref|XP_003602539.1| Auxin-induced protein 5NG4 [Medicago truncatula] gi|355491587|gb|AES72790.1| Auxin-induced protein 5NG4 [Medicago truncatula]

 Score =  436 bits (1121), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 223/328 (67%), Positives = 262/328 (79%), Gaps = 1/328 (0%)

Query: 7   MDKQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKK 66
           M   +PY+ V +IQ IYA MFLLSKAAF+ G+NNF+F+FYRQA AT+F+ P     EWK 
Sbjct: 1   MKGMKPYVVVFVIQTIYAIMFLLSKAAFDHGINNFIFVFYRQAVATIFLIPFVFIFEWKL 60

Query: 67  APPLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRME 126
           APPLS  TFCKIF LS  GIT ++DL G+ LIYTS TLAAA+TNCLP ITFFLA+LLR+E
Sbjct: 61  APPLSLRTFCKIFLLSFFGITMAMDLNGVGLIYTSPTLAAASTNCLPVITFFLALLLRIE 120

Query: 127 VLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNSQQIHGHVSSGKT 186
            LK+KTV G+AKLVGI+ C+GGAATLAFY GP L+LL HHH    ++ Q    H  SG T
Sbjct: 121 SLKIKTVAGIAKLVGIVACLGGAATLAFYKGPHLQLLSHHHHLLGYHKQHDQSHSPSG-T 179

Query: 187 WIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHE 246
           WIKGCF +L SNT +GLWLVLQ FV+K YPSKL FTTLQCFLSSIQS AIA+A+ERD  +
Sbjct: 180 WIKGCFFLLLSNTFWGLWLVLQAFVLKDYPSKLSFTTLQCFLSSIQSLAIALAIERDIEQ 239

Query: 247 WVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCE 306
           W LGWNV LLA+AYCGIIVT + YYL  WVIEKKGPVFLAMSTPLALI T ++S+FL  +
Sbjct: 240 WKLGWNVSLLAIAYCGIIVTGVGYYLMTWVIEKKGPVFLAMSTPLALIITILSSIFLFGD 299

Query: 307 IITLGRILGGLLLIGGLYAVLWGKSKEQ 334
           II+LG ILGG +L+ GLY+VLWGKS+EQ
Sbjct: 300 IISLGSILGGFMLVVGLYSVLWGKSREQ 327

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225431388|ref|XP_002272117.1| PREDICTED: auxin-induced protein 5NG4 [Vitis vinifera] gi|296088634|emb|CBI37625.3| unnamed protein product [Vitis vinifera]

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 246/364 (67%), Positives = 296/364 (81%), Gaps = 4/364 (1%)

Query: 7   MDKQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKK 66
           MD ++P++ V+LIQ IYAGMFL+SKAAFN GMNNF+F+FYRQA AT+F+ PI++  E K 
Sbjct: 1   MDAKKPFVAVLLIQTIYAGMFLVSKAAFNVGMNNFIFVFYRQAAATVFLVPIAIIFERKN 60

Query: 67  APPLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRME 126
            PPLSF+TFCKIF LSL GIT SLD+ G+ALIYTSATLAAATTNCLP ITFFLAVLLRME
Sbjct: 61  VPPLSFVTFCKIFMLSLFGITLSLDVNGVALIYTSATLAAATTNCLPVITFFLAVLLRME 120

Query: 127 VLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNSQQIHGHVSSGKT 186
            +KL+T  G+AK+ G+LICI GAAT+AFY GP L+L+ HHH+FGHH S +   HVSSG T
Sbjct: 121 TVKLRTSSGMAKIAGVLICIAGAATIAFYKGPHLQLMLHHHLFGHHTSHEHQSHVSSGAT 180

Query: 187 WIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHE 246
           W+KGC +ML SNT +GLWLVLQ ++MKSYP+KLL TTLQC LSSIQSF IAIALERDP +
Sbjct: 181 WVKGCLLMLMSNTFWGLWLVLQAYIMKSYPAKLLLTTLQCLLSSIQSFFIAIALERDPDQ 240

Query: 247 WVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCE 306
           W LGWNV+L+AVAY GI+VT +TYYLQ WVIEKKGPVFLAMSTP ALI T   S   L E
Sbjct: 241 WKLGWNVKLVAVAYTGIVVTGVTYYLQTWVIEKKGPVFLAMSTPFALIITIFCSAIFLGE 300

Query: 307 IITLGRILGGLLLIGGLYAVLWGKSKEQKMVDKSCLPTQVDQKVMNSDQIKVMAAKSPSS 366
            I+LG ILGG+LL+GGLY+VLWGKSKEQKM +K+C   Q +++    +++   AA+SP  
Sbjct: 301 AISLGSILGGILLVGGLYSVLWGKSKEQKM-EKTCSTAQAEKETELKEEV---AAQSPPP 356

Query: 367 PMFL 370
           P F+
Sbjct: 357 PFFV 360

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	370
TAIR|locus:2176065	359	UMAMIT21 "AT5G64700" [Arabidop	0.951	0.980	0.592	5.7e-107
TAIR|locus:2031144	343	UMAMIT22 "Usually multiple aci	0.872	0.941	0.466	6.5e-74
TAIR|locus:2169414	402	UMAMIT9 "Usually multiple acid	0.956	0.880	0.333	5.9e-57
TAIR|locus:2201148	389	UMAMIT19 "Usually multiple aci	0.964	0.917	0.337	1.8e-55
TAIR|locus:2049847	380	UMAMIT12 "Usually multiple aci	0.870	0.847	0.335	8e-53
TAIR|locus:2194864	370	SIAR1 "Siliques Are Red 1" [Ar	0.867	0.867	0.329	1.5e-51
TAIR|locus:2132457	373	UMAMIT17 "Usually multiple aci	0.883	0.876	0.314	1.7e-50
TAIR|locus:2132447	384	UMAMIT20 "Usually multiple aci	0.878	0.846	0.330	3.6e-50
TAIR|locus:2058460	394	UMAMIT11 "Usually multiple aci	0.859	0.807	0.338	3.2e-49
TAIR|locus:2012255	374	UMAMIT25 "Usually multiple aci	0.870	0.860	0.319	3.2e-49

TAIR|locus:2176065 UMAMIT21 "AT5G64700" [Arabidopsis thaliana (taxid:3702)]

 Score = 1058 (377.5 bits), Expect = 5.7e-107, P = 5.7e-107
 Identities = 211/356 (59%), Positives = 256/356 (71%)

Query:     7 MDKQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKK 66
             M+ ++PYL V +IQ IY  MFL+SKA FNGGMN FVF+FYRQAFAT+F+AP++   E K 
Sbjct:     3 MESKKPYLMVTIIQVIYTIMFLISKAVFNGGMNTFVFVFYRQAFATIFLAPLAFFFERKS 62

Query:    67 APPLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRME 126
             APPLSF+TF KIF LSL G+T SLDL GIAL YTSATLAAATT  LPAITFFLA+L  ME
Sbjct:    63 APPLSFVTFIKIFMLSLFGVTLSLDLNGIALSYTSATLAAATTASLPAITFFLALLFGME 122

Query:   127 VLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRL-LCHHHIFGH-HNSQQIHGHVSSG 184
              LK+K++ G AKLVGI +C+GG   LA Y GP L+L LC H   G  H  +   GHVS G
Sbjct:   123 RLKVKSIQGTAKLVGITVCMGGVIILAIYKGPLLKLPLCPHFYHGQEHPHRNNPGHVSGG 182

Query:   185 KT-WIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERD 243
              T W+KGC +M++SN  +GLWLVLQG V+K YPSKL FTTL C LSSIQSF IAIALERD
Sbjct:   183 STSWLKGCVLMITSNILWGLWLVLQGRVLKVYPSKLYFTTLHCLLSSIQSFVIAIALERD 242

Query:   244 PHEWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFL 303
                W LGWN+RL+AV YCG IVT + YYLQ+WVIEK+GPVFL+M TPL+L+FT ++S  L
Sbjct:   243 ISAWKLGWNLRLVAVIYCGFIVTGVAYYLQSWVIEKRGPVFLSMFTPLSLLFTLLSSAIL 302

Query:   304 LCEXXXXXXXXXXXXXXXXXYAVLWGKSKEQKMVDKSCLPTQVDQKVMNSDQIKVM 359
             LCE                 Y VLWGKS+E+K      +  Q +  V+  +++KV+
Sbjct:   303 LCEIISLGSIVGGLLLIIGLYCVLWGKSREEKNSGDDKIDLQKENDVV-CNEVKVV 357

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2031144 UMAMIT22 "Usually multiple acids move in and out Transporters 22" [Arabidopsis thaliana (taxid:3702)]

 Score = 746 (267.7 bits), Expect = 6.5e-74, P = 6.5e-74
 Identities = 155/332 (46%), Positives = 211/332 (63%)

Query:     6 LMDKQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWK 65
             +M + +  + ++ +Q +YAGM LLSK A + G N FVF+FYRQAFA L ++P +  +E  
Sbjct:     1 MMMEHKANMAMVFVQIVYAGMPLLSKVAISQGTNPFVFVFYRQAFAALALSPFAFFLESS 60

Query:    66 KAPPLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRM 125
             K+ PLSF+   KIFF+SL G+T SL+LY +A+  T+AT AAATTN +P+ITF LA+L R+
Sbjct:    61 KSSPLSFILLLKIFFISLCGLTLSLNLYYVAIENTTATFAAATTNAIPSITFVLALLFRL 120

Query:   126 EVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNSQQI-HGHVSSG 184
             E + LK   GVAK+ G ++ + GA   AF  GP L          H+NS  I +G V S 
Sbjct:   121 ETVTLKKSHGVAKVTGSMVGMLGALVFAFVKGPSL--------INHYNSSTIPNGTVPST 172

Query:   185 KTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDP 244
             K  +KG   ML++NT + LW+++Q  VMK YP+KL    LQC  S IQS   A+A+ R+P
Sbjct:   173 KNSVKGSITMLAANTCWCLWIIMQSKVMKEYPAKLRLVALQCLFSCIQSAVWAVAVNRNP 232

Query:   245 HEWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLL 304
               W + + + LL++AYCGI+VT LTY+LQ W IEKKGPVF A+ TPLALI T I S FL 
Sbjct:   233 SVWKIEFGLPLLSMAYCGIMVTGLTYWLQVWAIEKKGPVFTALYTPLALILTCIVSSFLF 292

Query:   305 CEXXXXXXXXXXXXXXXXXYAVLWGKSKEQKM 336
              E                 Y  LWGK+KE+++
Sbjct:   293 KETFYLGSVGGAVLLVCGLYLGLWGKTKEEEI 324

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2169414 UMAMIT9 "Usually multiple acids move in and out Transporters 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 586 (211.3 bits), Expect = 5.9e-57, P = 5.9e-57
 Identities = 120/360 (33%), Positives = 200/360 (55%)

Query:     7 MDKQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKK 66
             +   +PY  +I +Q  YAGM +++K + N GM+++V + YR A AT  +AP +   E K 
Sbjct:    13 LTSSKPYFAMISLQFGYAGMNIITKISLNTGMSHYVLVVYRHAIATAVIAPFAFFFERKA 72

Query:    67 APPLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRME 126
              P ++F  F ++F L L+G     + Y + L YTS T + A +N LPA+TF LAVL RME
Sbjct:    73 QPKITFSIFMQLFILGLLGPVIDQNFYYMGLKYTSPTFSCAMSNMLPAMTFILAVLFRME 132

Query:   127 VLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLC--HHHIF-GHHNSQQIHGHVSS 183
             +L LK +   AK+ G ++ + GA  +  Y GP + L    + HI    H +     + SS
Sbjct:   133 MLDLKKLWCQAKIAGTVVTVAGAMLMTIYKGPIVELFWTKYMHIQDSSHANTTSSKNSSS 192

Query:   184 GKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPS-KLLFTTLQCFLSSIQSFAIAIALER 242
              K ++KG  +++ +  ++    VLQ  ++K+Y   +L  TTL CF+ ++Q+ A+   +E 
Sbjct:   193 DKEFLKGSILLIFATLAWASLFVLQAKILKTYAKHQLSLTTLICFIGTLQAVAVTFVMEH 252

Query:   243 DPHEWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVF 302
             +P  W +GW++ LLA AY GI+ ++++YY+Q  V++K+GPVF    +PL ++   +   F
Sbjct:   253 NPSAWRIGWDMNLLAAAYSGIVASSISYYVQGIVMKKRGPVFATAFSPLMMVIVAVMGSF 312

Query:   303 LLCEXXXXXXXXXXXXXXXXXYAVLWGKSKEQKMVDKSCLPTQVDQKVMNSDQIKVMAAK 362
             +L E                 YAVLWGK KE ++    C   ++D     ++ ++   +K
Sbjct:   313 VLAEKIFLGGVIGAVLIVIGLYAVLWGKQKENQVT--ICELAKIDSNSKVTEDVEANGSK 370

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2201148 UMAMIT19 "Usually multiple acids move in and out Transporters 19" [Arabidopsis thaliana (taxid:3702)]

 Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
 Identities = 123/364 (33%), Positives = 193/364 (53%)

Query:     6 LMDKQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWK 65
             LM+  +PYL +I +Q  YAGM++++  +   GMN++V   YR A AT  +AP +L  E K
Sbjct:     5 LMNSLKPYLAMISMQFGYAGMYIITMVSLKHGMNHYVLAVYRHAIATAVIAPFALFHERK 64

Query:    66 KAPPLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRM 125
               P ++F  F +I  L  I      +LY + + YTSAT A+AT N LPAITF LA++ R+
Sbjct:    65 IRPKMTFRIFLQIALLGFIEPVLDQNLYYVGMTYTSATFASATANVLPAITFVLAIIFRL 124

Query:   126 EVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNSQQIHGHVSSG- 184
             E +  K V  +AK+VG +I + GA  +  Y GP +  +      G  +      H  +G 
Sbjct:   125 ESVNFKKVRSIAKVVGTVITVSGALLMTLYKGPIVDFIRFGGGGGGGSDGAGGSHGGAGA 184

Query:   185 ----KTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIAL 240
                 K WI G  ++L     +  + +LQ F +K YP++L  TTL C + +++  A+++  
Sbjct:   185 AAMDKHWIPGTLMLLGRTFGWAGFFILQSFTLKQYPAELSLTTLICLMGTLEGTAVSLVT 244

Query:   241 ERDPHEWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIAS 300
              RD   W +G++  L A AY G+I + + YY+Q  V+ ++GPVF+A   PL ++ T    
Sbjct:   245 VRDLSAWKIGFDSNLFAAAYSGVICSGVAYYVQGVVMRERGPVFVATFNPLCVVITAALG 304

Query:   301 VFLLCEXXXXXXXXXXXXXXXXXYAVLWGKSKEQKMVD--KSCLPTQVDQKVMNSDQIKV 358
             V +L E                 Y V+WGK K+++M D  + C    +   V   D  K 
Sbjct:   305 VVVLSESIHLGSVIGTLFIIVGLYTVVWGKGKDKRMTDDDEDCKGLPIKSPVKPVDTGKG 364

Query:   359 MAAK 362
             +AA+
Sbjct:   365 LAAE 368

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2049847 UMAMIT12 "Usually multiple acids move in and out Transporters 12" [Arabidopsis thaliana (taxid:3702)]

 Score = 547 (197.6 bits), Expect = 8.0e-53, P = 8.0e-53
 Identities = 111/331 (33%), Positives = 179/331 (54%)

Query:     7 MDKQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKK 66
             M+K RP+++++++Q   AGM +LSKA  N GM+N+V + YR A AT+ +AP +   + K 
Sbjct:    10 MEKARPFISMVVLQVGLAGMDILSKAVLNKGMSNYVLVVYRHAVATIVMAPFAFYFDKKV 69

Query:    67 APPLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRME 126
              P ++ + F KI  L L+      +LY + + YT+AT A A  N LPAITF LA +  +E
Sbjct:    70 RPKMTLMIFFKISLLGLLEPVIDQNLYYLGMKYTTATFATAMYNVLPAITFVLAYIFGLE 129

Query:   127 VLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNS-QQIHGHVSSGK 185
              +KL+ +    K+VG L  +GGA  +    GP L L     +  H+ +   IH  +    
Sbjct:   130 RVKLRCIRSTGKVVGTLATVGGAMIMTLVKGPVLDLFWTKGVSAHNTAGTDIHSAIKGAV 189

Query:   186 TWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALER-DP 244
                 GCF       S+  +++LQ   +++YP++L  T   C + +I+  A+A+ +E+ +P
Sbjct:   190 LVTIGCF-------SYACFMILQAITLRTYPAELSLTAWICLMGTIEGTAVALVMEKGNP 242

Query:   245 HEWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLL 304
               W +GW+ +LL   Y GI+ +AL YY+   V++ +GPVF+   +PL +I   I S  + 
Sbjct:   243 SAWAIGWDTKLLTATYSGIVCSALAYYVGGVVMKTRGPVFVTAFSPLCMIIVAIMSTIIF 302

Query:   305 CEXXXXXXXXXXXXXXXXXYAVLWGKSKEQK 335
              E                 Y V+WGK K+ K
Sbjct:   303 AEQMYLGRVLGAVVICAGLYLVIWGKGKDYK 333

GO:0005737 "cytoplasm" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

TAIR|locus:2194864 SIAR1 "Siliques Are Red 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
 Identities = 109/331 (32%), Positives = 184/331 (55%)

Query:     7 MDKQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKK 66
             M+K +P L +I +Q  YAGM++++  +F  GM+++V   YR   AT+ +AP +L  E K 
Sbjct:     6 MEKIKPILAIISLQFGYAGMYIITMVSFKHGMDHWVLATYRHVVATVVMAPFALMFERKI 65

Query:    67 APPLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRME 126
              P ++   F ++  L ++      +LY I L  TSA+  +A TN LPA+TF LA++ R+E
Sbjct:    66 RPKMTLAIFWRLLALGILEPLMDQNLYYIGLKNTSASYTSAFTNALPAVTFILALIFRLE 125

Query:   127 VLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNSQQIHGHVSS--- 183
              +  + V  VAK+VG +I +GGA  +  Y GP + +     +   HNS   HG  SS   
Sbjct:   126 TVNFRKVHSVAKVVGTVITVGGAMIMTLYKGPAIEI-----VKAAHNS--FHGGSSSTPT 178

Query:   184 GKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERD 243
             G+ W+ G   ++ S +++  + +LQ + +K YP++L   TL C + +I +   ++ + RD
Sbjct:   179 GQHWVLGTIAIMGSISTWAAFFILQSYTLKVYPAELSLVTLICGIGTILNAIASLIMVRD 238

Query:   244 PHEWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFL 303
             P  W +G +   LA  Y G++ + + YY+Q+ VI+++GPVF    +P+ +I T      +
Sbjct:   239 PSAWKIGMDSGTLAAVYSGVVCSGIAYYIQSIVIKQRGPVFTTSFSPMCMIITAFLGALV 298

Query:   304 LCEXXXXXXXXXXXXXXXXXYAVLWGKSKEQ 334
             L E                 Y+V+WGKSK++
Sbjct:   299 LAEKIHLGSIIGAVFIVLGLYSVVWGKSKDE 329

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

GO:0005515 "protein binding" evidence=IPI

GO:0005886 "plasma membrane" evidence=IDA

GO:0006865 "amino acid transport" evidence=IDA

GO:0015171 "amino acid transmembrane transporter activity" evidence=IDA

GO:0032973 "amino acid export" evidence=IDA

GO:0034639 "L-amino acid efflux transmembrane transporter activity" evidence=IDA

GO:0043090 "amino acid import" evidence=IDA

GO:0080144 "amino acid homeostasis" evidence=IMP

TAIR|locus:2132457 UMAMIT17 "Usually multiple acids move in and out Transporters 17" [Arabidopsis thaliana (taxid:3702)]

 Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
 Identities = 103/328 (31%), Positives = 176/328 (53%)

Query:     7 MDKQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKK 66
             MDK +P + +I +Q  YAGM++++  +F  GMN+++   YR   AT+ +AP +L +E K 
Sbjct:     6 MDKLKPIIAIISLQFGYAGMYIITMVSFKHGMNHWILATYRHVVATIVIAPFALILERKI 65

Query:    67 APPLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRME 126
              P +++  F +I  L  +      +LY I +  TSAT ++A  N LPAITF +AV+ R+E
Sbjct:    66 RPKMTWPLFLRILALGFLEPLLDQNLYYIGMKATSATYSSAFVNALPAITFIMAVIFRIE 125

Query:   127 VLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNSQQIHGHVSSGKT 186
              + LK    +AK++G  I +GGA  +  Y GP + L    H   H  S       +  + 
Sbjct:   126 TVNLKKTRSLAKVIGTAITVGGAMVMTLYKGPAIELFKTAHSSLHGGSSGTSSETTD-QN 184

Query:   187 WIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHE 246
             W+ G   ++ S T++  + +LQ F +K YP++L      C + ++ +   ++ + RD   
Sbjct:   185 WVTGTLAVMGSITTWAGFFILQSFTLKKYPAELSLVMWICAMGTVLNTIASLIMVRDVSA 244

Query:   247 WVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCE 306
             W +G +   LA  Y G++ + + YY+Q+ VI ++GPVF    +P+ +I T    V +L E
Sbjct:   245 WKVGMDSGTLAAVYSGVVCSGMAYYIQSIVIRERGPVFTTSFSPMCMIITAFLGVLVLAE 304

Query:   307 XXXXXXXXXXXXXXXXXYAVLWGKSKEQ 334
                              Y+V+WGK+K++
Sbjct:   305 KIHLGSIIGAIFIVFGLYSVVWGKAKDE 332

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2132447 UMAMIT20 "Usually multiple acids move in and out Transporters 20" [Arabidopsis thaliana (taxid:3702)]

 Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
 Identities = 110/333 (33%), Positives = 175/333 (52%)

Query:     7 MDKQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKK 66
             M K RPYL +I +Q   AG +++  A  N G N +V I YR   A L +AP +L  E K 
Sbjct:     8 MHKLRPYLLMIFLQFGAAGTYIVIMATLNQGQNRYVVIVYRNLVAALVLAPFALIFERKV 67

Query:    67 APPLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRME 126
              P ++     KI  L  +          + +  TSAT  +A  N LP++TF +A +LRME
Sbjct:    68 RPKMTLSVLWKIMALGFLEPVLDQGFGYLGMNMTSATYTSAIMNILPSVTFIIAWILRME 127

Query:   127 VLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNSQQIHGHVSSGK- 185
              + +  V   AK++G L+ +GGA  +  Y GP + L      + + N  Q +GH ++ + 
Sbjct:   128 KVNIAEVRSKAKIIGTLVGLGGALVMTLYKGPLIPLP-----WSNPNMDQQNGHTNNSQD 182

Query:   186 --TWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERD 243
                W+ G  ++L    ++  + VLQ   +K+YP+ L  + L C   ++QSFA+A+ +ER 
Sbjct:   183 HNNWVVGTLLILLGCVAWSGFYVLQSITIKTYPADLSLSALICLAGAVQSFAVALVVERH 242

Query:   244 PHEWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFL 303
             P  W +GW+ RL A  Y GI+ + +TYY+Q  V++ +GPVF+    PL +I   + + F+
Sbjct:   243 PSGWAVGWDARLFAPLYTGIVSSGITYYVQGMVMKTRGPVFVTAFNPLCMILVALIASFI 302

Query:   304 LCEXXXXXXXXXXXXXXXXXYAVLWGKSKEQKM 336
             L E                 Y V+WGK K+ ++
Sbjct:   303 LHEQIHFGCVIGGAVIAAGLYMVVWGKGKDYEV 335

GO:0005576 "extracellular region" evidence=ISM

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2058460 UMAMIT11 "Usually multiple acids move in and out Transporters 11" [Arabidopsis thaliana (taxid:3702)]

 Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
 Identities = 112/331 (33%), Positives = 187/331 (56%)

Query:     2 MQLPLMDKQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLA 61
             M L + +  +PY  ++ +Q  YAGM L++K   + GM+++V + YR AFAT  +AP +L 
Sbjct:     1 MGLRMSESAKPYFAMVCLQFGYAGMNLVTKTVLDRGMSHYVLVAYRNAFATAAIAPFALL 60

Query:    62 VEWKKAPPLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAV 121
              E K    ++F  F +IF L+L+G     +LY I L  TS T ++A +N +PAIT  LA 
Sbjct:    61 SERKVRSKMTFPIFMRIFLLALLGPVIDQNLYYIGLKLTSPTFSSAVSNIVPAITIILAT 120

Query:   122 LLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNSQQIHGHV 181
             L RME ++++ V  + K++G L+ + G+  + FY GP +      + F  H +       
Sbjct:   121 LFRMEKVEMRKVRCLVKVMGTLVTVVGSILMIFYKGPFI------NFFRSHLTA-----A 169

Query:   182 SSGKT--WIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIA 239
             SS  T  ++K    +L ++ S+  + VLQ   +K Y + L  +T+ CF+ ++QS A+A  
Sbjct:   170 SSPPTADYLKAAVFLLLASLSWASFFVLQAATLKKYSAHLSMSTMVCFMGTLQSLALAFV 229

Query:   240 LERDPHEWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIA 299
             +E +P    +G+++ LLA AY GI+ +++ YY+Q  ++++KGPVF+    PL ++  +I 
Sbjct:   230 MEHNPSALNIGFDMNLLASAYAGIMSSSIAYYVQGLMMQRKGPVFVTAFNPLIVVIVSIM 289

Query:   300 SVFLLCEXXXXXXXXXXXXXXXXXYAVLWGK 330
             S F+L +                 YAVLWGK
Sbjct:   290 SFFVLGQGIYLGGVIGVVVLMVGVYAVLWGK 320

GO:0005576 "extracellular region" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2012255 UMAMIT25 "Usually multiple acids move in and out Transporters 25" [Arabidopsis thaliana (taxid:3702)]

 Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
 Identities = 103/322 (31%), Positives = 175/322 (54%)

Query:    12 PYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLS 71
             P+L ++L+Q  YAGM + SK A   GM   + + YRQ FAT+   P++  +E K  P ++
Sbjct:     8 PFLAMVLVQIGYAGMNITSKMAMEAGMKPLILVAYRQIFATIATFPVAFFLERKTRPKIT 67

Query:    72 FLTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLK 131
                  ++FF S+ G T +  LY + L  +S T+A A TN LPA+TF LA + R E + +K
Sbjct:    68 LRILVQVFFCSITGATGNQVLYFVGLQNSSPTIACALTNLLPAVTFLLAAIFRQETVGIK 127

Query:   132 TVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNSQQIHGHVSSGKTWIKGC 191
                G AK++G L+C+ GA  L+FY+G  + +      + +  +   HG  S    +  G 
Sbjct:   128 KASGQAKVIGTLVCVIGAMVLSFYHGHTIGIGESKIHWAYAENITKHGSSSGHSNFFLGP 187

Query:   192 FIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHEWVLGW 251
             F+++++  S+  W ++Q  + +++ +    T L C + SIQ  AIA+  +    +W L  
Sbjct:   188 FLIMAAAVSWAAWFIIQTKMSETFAAPYTSTLLMCLMGSIQCGAIALISDHTISDWSLSS 247

Query:   252 NVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEXXXXX 311
              +R ++  Y G++ +AL + L +W +++KGP+++++ +PL L+   I S  LL E     
Sbjct:   248 PLRFISALYAGVVASALAFCLMSWAMQRKGPLYVSVFSPLLLVVVAIFSWALLEEKLYTG 307

Query:   312 XXXXXXXXXXXXYAVLWGKSKE 333
                         Y VLWGK +E
Sbjct:   308 TFMGSALVVIGLYGVLWGKDRE 329

GO:0016020 "membrane" evidence=IEA;ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9FGG3	WTR45_ARATH	No assigned EC number	0.6256	0.9567	0.9860	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: N21L8 mtn21-like protein (361 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	370
PLN00411	358	PLN00411, PLN00411, nodulin MtN21 family protein;	8e-42
COG0697	292	COG0697, RhaT, Permeases of the drug/metabolite tr	1e-07
pfam00892	126	pfam00892, EamA, EamA-like transporter family	3e-07
pfam00892	126	pfam00892, EamA, EamA-like transporter family	6e-04

>gnl|CDD|177805 PLN00411, PLN00411, nodulin MtN21 family protein; Provisional

 Score =  149 bits (377), Expect = 8e-42
 Identities = 97/336 (28%), Positives = 180/336 (53%), Gaps = 9/336 (2%)

Query: 4   LPLMDKQRPYLTVIL-IQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAP-ISLA 61
           + L  ++  +LT +L  +    G+  L K A + G+N + F+ Y    A+L + P +   
Sbjct: 5   VSLWRREAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFT 64

Query: 62  VEWKKAPPLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAV 121
              +  PPLS     KI  L  +G  + +  Y I + Y++ TLA+A +N  PA+TF LA+
Sbjct: 65  NRSRSLPPLSVSILSKIGLLGFLGSMYVITGY-IGIEYSNPTLASAISNITPALTFILAI 123

Query: 122 LLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNSQQIHGHV 181
           + RME +  K    VAK++G ++ + GA  + FY+GP++ +        + N +Q+   +
Sbjct: 124 IFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSP---PYLNFRQLSPPL 180

Query: 182 SSGKT-WIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIAL 240
           SS  + W+ G  ++        +  +LQ  +M  YP+    + L     SI +  I + +
Sbjct: 181 SSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVV 240

Query: 241 ERD-PHEWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIA 299
           E++ P  W++ +++ L+ +    II T++ Y + +W +  KGP++LA+  PL+++   + 
Sbjct: 241 EKNNPSVWIIHFDITLITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVM 299

Query: 300 SVFLLCEIITLGRILGGLLLIGGLYAVLWGKSKEQK 335
               L + + LG ++GG+L+  G YAV+WGK+ E+K
Sbjct: 300 GAIFLNDSLYLGCLIGGILITLGFYAVMWGKANEEK 335

Length = 358

>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

 Score = 52.2 bits (125), Expect = 1e-07
 Identities = 64/327 (19%), Positives = 118/327 (36%), Gaps = 37/327 (11%)

Query: 7   MDKQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKK 66
                  L ++L   ++   F+  K A             R   A L + P+ L     +
Sbjct: 3   RALLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLL--EPR 60

Query: 67  APPLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRME 126
               +   +  +  L+L+G+     L  +AL YTSA++A+     LP  T  LAVLL   
Sbjct: 61  GLRPALRPWLLLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLL-- 118

Query: 127 VLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNSQQIHGHVSSGKT 186
              L     + +++GIL+ + G   +    G                          G  
Sbjct: 119 ---LGERLSLLQILGILLALAGVLLILLGGG------------------------GGGIL 151

Query: 187 WIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHE 246
            + G  + L++   + L+  L   + +      L   LQ  L+ +      ++    P  
Sbjct: 152 SLLGLLLALAAALLWALYTALVKRLSR-LGPVTLALLLQLLLALLLLLLFFLSGFGAPIL 210

Query: 247 WVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCE 306
                    L + Y G+  T L Y L  + +   G   +A+ + L  +F  +  V LL E
Sbjct: 211 SR-----AWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGE 265

Query: 307 IITLGRILGGLLLIGGLYAVLWGKSKE 333
            ++  ++LG  L++ G+        + 
Sbjct: 266 PLSPAQLLGAALVVLGVLLASLRARRR 292

Length = 292

>gnl|CDD|216178 pfam00892, EamA, EamA-like transporter family

 Score = 48.4 bits (116), Expect = 3e-07
 Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 4/129 (3%)

Query: 200 SFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHEWVLGWNVRLLAVA 259
           S+ L+ V    +++     L FT  +  ++ I    +   L +      L     +LA+ 
Sbjct: 2   SWALYFVFSKKLLERISP-LTFTAYRFLIAGILLILLLFLLRKPFALLSLKA---ILALL 57

Query: 260 YCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLL 319
           Y G+  TAL Y L  + ++       ++ T L+ +FT I SV LL E +TL ++LG +L+
Sbjct: 58  YLGLFGTALGYLLYFYALKYVSASNASVITSLSPVFTLILSVLLLGEKLTLKQLLGIVLI 117

Query: 320 IGGLYAVLW 328
           + G+  +L 
Sbjct: 118 LLGVLLILL 126

This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Length = 126

>gnl|CDD|216178 pfam00892, EamA, EamA-like transporter family

 Score = 39.1 bits (92), Expect = 6e-04
 Identities = 35/129 (27%), Positives = 55/129 (42%), Gaps = 8/129 (6%)

Query: 22  IYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFL 81
            +A  F+ SK      ++   F  YR   A + +  + L +  K    LS      + +L
Sbjct: 2   SWALYFVFSKKLLER-ISPLTFTAYRFLIAGI-LLILLLFLLRKPFALLSLKAILALLYL 59

Query: 82  SLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVG 141
            L G      LY  AL Y SA+ A+  T+  P  T  L+VLL      L     + +L+G
Sbjct: 60  GLFGTALGYLLYFYALKYVSASNASVITSLSPVFTLILSVLL------LGEKLTLKQLLG 113

Query: 142 ILICIGGAA 150
           I++ + G  
Sbjct: 114 IVLILLGVL 122

This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Length = 126

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	370
PLN00411	358	nodulin MtN21 family protein; Provisional	100.0
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	100.0
PRK11272	292	putative DMT superfamily transporter inner membran	100.0
PRK11689	295	aromatic amino acid exporter; Provisional	100.0
PRK15430	296	putative chloramphenical resistance permease RarD;	100.0
PRK10532	293	threonine and homoserine efflux system; Provisiona	100.0
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	100.0
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.97
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.96
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.96
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.95
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.95
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.93
COG2962	293	RarD Predicted permeases [General function predict	99.92
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.91
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.9
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.88
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.84
KOG2765	416	consensus Predicted membrane protein [Function unk	99.8
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.76
COG2510	140	Predicted membrane protein [Function unknown]	99.72
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.7
KOG1580	337	consensus UDP-galactose transporter related protei	99.67
KOG2766	336	consensus Predicted membrane protein [Function unk	99.66
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.61
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.58
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.55
COG2510	140	Predicted membrane protein [Function unknown]	99.55
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.54
KOG1581	327	consensus UDP-galactose transporter related protei	99.42
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.42
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.4
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.38
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	99.32
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.31
PRK13499	345	rhamnose-proton symporter; Provisional	99.29
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.27
PF13536	113	EmrE: Multidrug resistance efflux transporter	99.24
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	99.23
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	99.2
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	99.18
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.17
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.15
PRK11272	292	putative DMT superfamily transporter inner membran	99.11
PLN00411	358	nodulin MtN21 family protein; Provisional	99.1
PRK15430	296	putative chloramphenical resistance permease RarD;	99.08
PRK11689	295	aromatic amino acid exporter; Provisional	99.02
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.02
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.01
KOG1582	367	consensus UDP-galactose transporter related protei	98.96
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.94
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.83
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	98.81
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.79
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	98.78
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.77
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.69
KOG2922	335	consensus Uncharacterized conserved protein [Funct	98.68
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.67
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.59
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.58
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.57
COG2962	293	RarD Predicted permeases [General function predict	98.54
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.46
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.44
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	98.4
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	98.32
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	98.06
KOG4510	346	consensus Permease of the drug/metabolite transpor	97.95
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	97.94
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.9
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.85
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.75
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.71
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	97.67
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.63
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.62
COG2076	106	EmrE Membrane transporters of cations and cationic	97.57
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.57
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	97.57
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.51
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	97.47
PRK11431	105	multidrug efflux system protein; Provisional	97.46
KOG2765	416	consensus Predicted membrane protein [Function unk	97.27
PRK11431	105	multidrug efflux system protein; Provisional	97.24
COG2076	106	EmrE Membrane transporters of cations and cationic	97.14
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.1
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	97.07
PRK13499	345	rhamnose-proton symporter; Provisional	96.96
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.94
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	96.94
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	96.91
KOG1581	327	consensus UDP-galactose transporter related protei	96.83
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.8
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	96.79
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	96.73
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	96.66
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	96.18
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	96.09
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	96.01
KOG1580	337	consensus UDP-galactose transporter related protei	95.77
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	95.65
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	95.3
KOG2922	335	consensus Uncharacterized conserved protein [Funct	95.23
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	91.55
KOG1443	349	consensus Predicted integral membrane protein [Fun	91.46
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	91.19
KOG1582	367	consensus UDP-galactose transporter related protei	91.16
KOG3912	372	consensus Predicted integral membrane protein [Gen	90.39
KOG4831	125	consensus Unnamed protein [Function unknown]	88.0
PF07168	336	Ureide_permease: Ureide permease; InterPro: IPR009	87.61
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	85.49
PRK02237	109	hypothetical protein; Provisional	83.3
PRK02237	109	hypothetical protein; Provisional	82.6
PF02694	107	UPF0060: Uncharacterised BCR, YnfA/UPF0060 family;	81.91

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=100.00  E-value=1.5e-37  Score=289.93  Aligned_cols=325  Identities=27%  Similarity=0.536  Sum_probs=252.6

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhc-ccCCCCCHHHHHHHHHHHHHHH
Q 017528            8 DKQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEW-KKAPPLSFLTFCKIFFLSLIGI   86 (370)
Q Consensus         8 ~~~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~   86 (370)
                      ++.+.++.+++..+.++...++.|...+.|++|..+.++|+.++.++++++.+.+++ +.+++.+++++....+.|+++ 
T Consensus        10 ~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g-   88 (358)
T PLN00411         10 REAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLG-   88 (358)
T ss_pred             hccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHH-
Confidence            456789999999999999999999999999999999999999999999998876544 233444678889999999998 


Q ss_pred             HHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCcccccccc
Q 017528           87 TFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHH  166 (370)
Q Consensus        87 ~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~~  166 (370)
                      ...+.+++.+++|+++++++++.++.|+++.+++++++.|+++.++|+++.+++|++++++|+.++..++++.....+++
T Consensus        89 ~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~  168 (358)
T PLN00411         89 SMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSP  168 (358)
T ss_pred             HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCccccccccc
Confidence            77888999999999999999999999999999999996555555555555599999999999999886444321100000


Q ss_pred             ccccCCCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhcCC-Cc
Q 017528          167 HIFGHHNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERD-PH  245 (370)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~  245 (370)
                      ......++..+..+  ...+...|+++++.++++||+|++.+|+..++++++...+++++..+.+...+..+..+.+ ..
T Consensus       169 ~~~~~~~~~~~~~~--~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~  246 (358)
T PLN00411        169 PYLNFRQLSPPLSS--SNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPS  246 (358)
T ss_pred             ccccccccccccCC--CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcc
Confidence            00000000000000  2234467999999999999999999999988887656777788877777766666555432 22


Q ss_pred             ccccccchhhHHHHHHHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHH
Q 017528          246 EWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYA  325 (370)
Q Consensus       246 ~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l  325 (370)
                      .|.......+..+++.+++ +.++|.+|++++++.+|++++...+++|+++++++++++||++++.+++|+++|+.|+++
T Consensus       247 ~~~~~~~~~~~~i~y~~i~-t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l  325 (358)
T PLN00411        247 VWIIHFDITLITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYA  325 (358)
T ss_pred             cceeccchHHHHHHHHHHH-HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHH
Confidence            2322222234457777765 678999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhcCcchhhhh
Q 017528          326 VLWGKSKEQKM  336 (370)
Q Consensus       326 ~~~~~~~~~~~  336 (370)
                      ..+.++||.++
T Consensus       326 ~~~~~~~~~~~  336 (358)
T PLN00411        326 VMWGKANEEKD  336 (358)
T ss_pred             HHhhhhhhhhh
Confidence            98866655333

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=100.00  E-value=7.3e-32  Score=248.48  Aligned_cols=280  Identities=17%  Similarity=0.182  Sum_probs=217.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 017528           12 PYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFSLD   91 (370)
Q Consensus        12 ~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   91 (370)
                      ..++.++++++||.++++.|...++ ++|..+.++|+.++.+.++++..   ++   +.++   ......|++.....+.
T Consensus         5 ~~l~~l~~~~~Wg~~~~~~k~~~~~-~~p~~~~~~R~~~a~~~l~~~~~---~~---~~~~---~~~~~~g~~~~~~~~~   74 (299)
T PRK11453          5 DGVLALLVVVVWGLNFVVIKVGLHN-MPPLMLAGLRFMLVAFPAIFFVA---RP---KVPL---NLLLGYGLTISFGQFA   74 (299)
T ss_pred             HHHHHHHHHHHHhhhHHHHHHHHhc-CCHHHHHHHHHHHHHHHHHHHhc---CC---CCch---HHHHHHHHHHHHHHHH
Confidence            4567889999999999999999986 99999999999998776655432   11   1122   2344456555455666


Q ss_pred             HHHHHHhh-cChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCcccccccccccc
Q 017528           92 LYGIALIY-TSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFG  170 (370)
Q Consensus        92 ~~~~al~~-~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~~~~~~  170 (370)
                      +++.+++| .+++.++++.++.|+++.+++++++|||++.+      ++++++++++|+.++...+.+            
T Consensus        75 ~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~------~~~~~~l~~~Gv~ll~~~~~~------------  136 (299)
T PRK11453         75 FLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGK------QLAGIALAIFGVLVLIEDSLN------------  136 (299)
T ss_pred             HHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHH------HHHHHHHHHHhHHHhccccCC------------
Confidence            77889998 58899999999999999999999999999999      999999999999988742110            


Q ss_pred             CCCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc--hhHHHHHHHHHHHHHHHHHHHhcCCC---c
Q 017528          171 HHNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSK--LLFTTLQCFLSSIQSFAIAIALERDP---H  245 (370)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~---~  245 (370)
                                  .......|+++++.++++|++|.+.+|+..++.+++  .....+....+.+.........+.+.   .
T Consensus       137 ------------~~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (299)
T PRK11453        137 ------------GQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIH  204 (299)
T ss_pred             ------------CcchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhh
Confidence                        112234799999999999999999999987654432  23334444444443333333333321   1


Q ss_pred             ccccccchhhHHHHHHHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHH
Q 017528          246 EWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYA  325 (370)
Q Consensus       246 ~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l  325 (370)
                      .+...+...|..++++|+++++++|.+|++++++.++.+++.+.+++|+++.+++++++||++++.+++|++++++|+++
T Consensus       205 ~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l  284 (299)
T PRK11453        205 SLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYI  284 (299)
T ss_pred             hhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHH
Confidence            11122345688999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             HhcCcc
Q 017528          326 VLWGKS  331 (370)
Q Consensus       326 ~~~~~~  331 (370)
                      ..+.++
T Consensus       285 ~~~~~~  290 (299)
T PRK11453        285 NVFGLR  290 (299)
T ss_pred             Hhcchh
Confidence            877554

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=100.00  E-value=6.4e-32  Score=248.04  Aligned_cols=278  Identities=12%  Similarity=0.112  Sum_probs=231.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017528           13 YLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFSLDL   92 (370)
Q Consensus        13 ~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~   92 (370)
                      .+..+...++||.++++.|...++ ++|..++++|+.++.++++++...++ ++  ..+++++......|.++...++.+
T Consensus        10 ~~~~~~~~~iWg~~~~~~K~~~~~-~~p~~~~~~R~~~a~l~ll~~~~~~~-~~--~~~~~~~~~~~~~g~~~~~~~~~~   85 (292)
T PRK11272         10 FGALFALYIIWGSTYLVIRIGVES-WPPLMMAGVRFLIAGILLLAFLLLRG-HP--LPTLRQWLNAALIGLLLLAVGNGM   85 (292)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHhcc-CCHHHHHHHHHHHHHHHHHHHHHHhC-CC--CCcHHHHHHHHHHHHHHHHHHHHH
Confidence            456678889999999999998885 99999999999999999888765422 22  224677888888998876778889


Q ss_pred             HHHHH-hhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCccccccccccccC
Q 017528           93 YGIAL-IYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGH  171 (370)
Q Consensus        93 ~~~al-~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~~~~~~~  171 (370)
                      ++++. ++++++.++++.++.|+++.+++++ +|||++++      +++|+.++++|+.++...+ .             
T Consensus        86 ~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~------~~~~~~la~~Gv~ll~~~~-~-------------  144 (292)
T PRK11272         86 VTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKL------EWLGIAIGLAGIVLLNSGG-N-------------  144 (292)
T ss_pred             HHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchh------HHHHHHHHHHhHHHHhcCc-c-------------
Confidence            99999 9999999999999999999999986 69999999      9999999999999876421 1             


Q ss_pred             CCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhcCCCccccccc
Q 017528          172 HNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHEWVLGW  251 (370)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  251 (370)
                                 . .....|++++++++++||.+.+..||..++  ++...+.+++..+.+...+.....+.+..  ...+
T Consensus       145 -----------~-~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~  208 (292)
T PRK11272        145 -----------L-SGNPWGAILILIASASWAFGSVWSSRLPLP--VGMMAGAAEMLAAGVVLLIASLLSGERLT--ALPT  208 (292)
T ss_pred             -----------c-ccchHHHHHHHHHHHHHHHHHHHHHhcCCC--cchHHHHHHHHHHHHHHHHHHHHcCCccc--ccCC
Confidence                       1 122469999999999999999999997543  33566778888888877776654433211  1123


Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHhcCcc
Q 017528          252 NVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLWGKS  331 (370)
Q Consensus       252 ~~~~~~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~  331 (370)
                      ...|..+++.+++++++++.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++++.|+++..+.++
T Consensus       209 ~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~  288 (292)
T PRK11272        209 LSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKY  288 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence            45688899999999999999999999999999999999999999999999999999999999999999999999876433

>PRK11689 aromatic amino acid exporter; Provisional

Probab=100.00  E-value=2.7e-31  Score=244.17  Aligned_cols=285  Identities=10%  Similarity=0.055  Sum_probs=215.3

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHH
Q 017528            9 KQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITF   88 (370)
Q Consensus         9 ~~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   88 (370)
                      +.++++++++++++||.+++..|...++ ++|..+.++|+.++.+++.++..   +++.++   + ++.....+.++...
T Consensus         2 ~~~~~l~~l~a~~~Wg~~~~~~k~~~~~-~~P~~~~~~R~~~a~l~l~~~~~---~~~~~~---~-~~~~~~~~~l~~~~   73 (295)
T PRK11689          2 SQKATLIGLIAILLWSTMVGLIRGVSES-LGPVGGAAMIYSVSGLLLLLTVG---FPRLRQ---F-PKRYLLAGGLLFVS   73 (295)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHHcc-CChHHHHHHHHHHHHHHHHHHcc---cccccc---c-cHHHHHHHhHHHHH
Confidence            4577889999999999999999999997 99999999999999988887531   111111   1 22233445555577


Q ss_pred             HHHHHHHHHhh----cChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCcccccc
Q 017528           89 SLDLYGIALIY----TSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLC  164 (370)
Q Consensus        89 ~~~~~~~al~~----~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~  164 (370)
                      ++.+++.+++|    .++..++++.++.|+++.+++++++|||++++      +++|++++++|++++..++. ..+..+
T Consensus        74 ~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~------~~~g~~l~~~Gv~li~~~~~-~~~~~~  146 (295)
T PRK11689         74 YEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWL------LIPGLLLALAGVAWVLGGDN-GLSLAE  146 (295)
T ss_pred             HHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHH------HHHHHHHHHHhHhheecCCc-cchhhh
Confidence            78888888865    57788899999999999999999999999999      99999999999999875321 000000


Q ss_pred             ccccccCCCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhcCCC
Q 017528          165 HHHIFGHHNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDP  244 (370)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  244 (370)
                        .+          +   +..+...|++++++++++||+|+++.||..++. ++.....   ..+.+...+.....+...
T Consensus       147 --~~----------~---~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~-~~~~~~~---~~~~~~l~~~~~~~~~~~  207 (295)
T PRK11689        147 --LI----------N---NIASNPLSYGLAFIGAFIWAAYCNVTRKYARGK-NGITLFF---ILTALALWIKYFLSPQPA  207 (295)
T ss_pred             --hh----------h---ccccChHHHHHHHHHHHHHHHHHHHHhhccCCC-CchhHHH---HHHHHHHHHHHHHhcCcc
Confidence              00          0   111234699999999999999999999987665 4454322   223333333333322111


Q ss_pred             cccccccchhhHHHHHHHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHH
Q 017528          245 HEWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLY  324 (370)
Q Consensus       245 ~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~  324 (370)
                      ..   .+...|..+++.+ +.++++|.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++|+.|++
T Consensus       208 ~~---~~~~~~~~l~~~~-~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~  283 (295)
T PRK11689        208 MV---FSLPAIIKLLLAA-AAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSL  283 (295)
T ss_pred             cc---CCHHHHHHHHHHH-HHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHH
Confidence            11   2335577777777 4789999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcCcc
Q 017528          325 AVLWGKS  331 (370)
Q Consensus       325 l~~~~~~  331 (370)
                      +..+.++
T Consensus       284 ~~~~~~~  290 (295)
T PRK11689        284 LCWLATR  290 (295)
T ss_pred             HHhhhHh
Confidence            8865443

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=100.00  E-value=4e-31  Score=243.13  Aligned_cols=281  Identities=12%  Similarity=0.031  Sum_probs=211.3

Q ss_pred             cCccccchhHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccC--C-CCCHHHHHHHHH
Q 017528            4 LPLMDKQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKA--P-PLSFLTFCKIFF   80 (370)
Q Consensus         4 ~~~~~~~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~--~-~~~~~~~~~~~~   80 (370)
                      |||+++.+|++++++++++||..+++.|.. .+ ++|.++.++|+.++.++++++...++++..  + ..+++.+.. ..
T Consensus         1 ~~~~~~~~g~~~~l~a~~~wg~~~~~~k~~-~~-~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~   77 (296)
T PRK15430          1 MDAKQTRQGVLLALAAYFIWGIAPAYFKLI-YY-VPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFM-LA   77 (296)
T ss_pred             CCchhhhhHHHHHHHHHHHHHHHHHHHHHh-cC-CCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHH-HH
Confidence            455677899999999999999999999975 54 999999999999999888777654322111  0 012333333 34


Q ss_pred             HHHHHHHHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCcc
Q 017528           81 LSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQL  160 (370)
Q Consensus        81 ~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~  160 (370)
                      .+.++.+.++.++++|++++++++++++.++.|+++.+++++++|||++++      ++.+++++++|+.++..++    
T Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~------~~~g~~l~~~Gv~li~~~~----  147 (296)
T PRK15430         78 VSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRM------QWLAVILAICGVLVQLWTF----  147 (296)
T ss_pred             HHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHH------HHHHHHHHHHHHHHHHHHc----
Confidence            666666889999999999999999999999999999999999999999999      9999999999999987431    


Q ss_pred             ccccccccccCCCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-CchhHHHHHHHHHHHHHHHHHHH
Q 017528          161 RLLCHHHIFGHHNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYP-SKLLFTTLQCFLSSIQSFAIAIA  239 (370)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~  239 (370)
                                            ++.     ..+.++++++||.|.+..|+..++.. +....+.+....+.+...+.   
T Consensus       148 ----------------------~~~-----~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  197 (296)
T PRK15430        148 ----------------------GSL-----PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAI---  197 (296)
T ss_pred             ----------------------CCc-----cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHH---
Confidence                                  111     14678899999999999988654321 11222333443433332211   


Q ss_pred             hcCCCcccccccchh-hHHHHHHHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHH
Q 017528          240 LERDPHEWVLGWNVR-LLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLL  318 (370)
Q Consensus       240 ~~~~~~~~~~~~~~~-~~~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~l  318 (370)
                      .+.....+. ..+.. +..+...|+ .+.+++.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++
T Consensus       198 ~~~~~~~~~-~~~~~~~~~~~~~g~-~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~l  275 (296)
T PRK15430        198 ADSSTSHMG-QNPMSLNLLLIAAGI-VTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAF  275 (296)
T ss_pred             ccCCccccc-CCcHHHHHHHHHHHH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence            111111111 11222 233344454 688999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcC
Q 017528          319 LIGGLYAVLWG  329 (370)
Q Consensus       319 i~~g~~l~~~~  329 (370)
                      ++.|+.+....
T Consensus       276 I~~~~~v~~~~  286 (296)
T PRK15430        276 IWVALAIFVMD  286 (296)
T ss_pred             HHHHHHHHHHH
Confidence            99888877643

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=100.00  E-value=2.1e-30  Score=238.02  Aligned_cols=278  Identities=13%  Similarity=0.087  Sum_probs=222.3

Q ss_pred             cccchhHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHH
Q 017528            7 MDKQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGI   86 (370)
Q Consensus         7 ~~~~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   86 (370)
                      .++.+++.+++++++.|+..+.+.|...++ ++|..+.++|++++.++++++...  ++  ++.+++++...+..|.+. 
T Consensus         8 ~~~~~~~~~~~la~~~~~~~~~~~K~~~~~-~~~~~~~~~R~~~a~l~l~~~~~~--~~--~~~~~~~~~~~~~~g~~~-   81 (293)
T PRK10532          8 LPVWLPILLLLIAMASIQSGASLAKSLFPL-VGAPGVTALRLALGTLILIAIFKP--WR--LRFAKEQRLPLLFYGVSL-   81 (293)
T ss_pred             cccchHHHHHHHHHHHHHhhHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHhH--Hh--ccCCHHHHHHHHHHHHHH-
Confidence            456889999999999999999999999997 999999999999999888876432  11  123567787888888876 


Q ss_pred             HHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCcccccccc
Q 017528           87 TFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHH  166 (370)
Q Consensus        87 ~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~~  166 (370)
                      ...+.++++++++++++.++++..+.|+++.+++.    ||.  .      +..++.++++|+.++...+.+        
T Consensus        82 ~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~--~------~~~~~~i~~~Gv~li~~~~~~--------  141 (293)
T PRK10532         82 GGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRP--V------DFVWVVLAVLGLWFLLPLGQD--------  141 (293)
T ss_pred             HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CCh--H------HHHHHHHHHHHHheeeecCCC--------
Confidence            77788999999999999999999999999998862    332  2      445677889999887632111        


Q ss_pred             ccccCCCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcc
Q 017528          167 HIFGHHNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHE  246 (370)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  246 (370)
                                      .......|++++++++++||.|.+..|+..++.+ +... .+....+.+...+.....+.. ..
T Consensus       142 ----------------~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~~-~~~~-~~~~~~~~~~l~~~~~~~~~~-~~  202 (293)
T PRK10532        142 ----------------VSHVDLTGAALALGAGACWAIYILSGQRAGAEHG-PATV-AIGSLIAALIFVPIGALQAGE-AL  202 (293)
T ss_pred             ----------------cccCChHHHHHHHHHHHHHHHHHHHHHHHhccCC-chHH-HHHHHHHHHHHHHHHHHccCc-cc
Confidence                            1112346999999999999999999999877754 4555 455566666666665443221 11


Q ss_pred             cccccchhhHHHHHHHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHH
Q 017528          247 WVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAV  326 (370)
Q Consensus       247 ~~~~~~~~~~~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~  326 (370)
                         .+...|..++++|+++++++|.+|++++++.++++++.+.+++|+++.+++++++||+++..+++|++++++|++..
T Consensus       203 ---~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~  279 (293)
T PRK10532        203 ---WHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGS  279 (293)
T ss_pred             ---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHH
Confidence               12234556689999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             hcCcch
Q 017528          327 LWGKSK  332 (370)
Q Consensus       327 ~~~~~~  332 (370)
                      .+.+++
T Consensus       280 ~~~~~~  285 (293)
T PRK10532        280 TLTIRR  285 (293)
T ss_pred             HhcCCC
Confidence            765433

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=100.00  E-value=1.3e-30  Score=235.78  Aligned_cols=258  Identities=22%  Similarity=0.265  Sum_probs=219.9

Q ss_pred             HHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCh
Q 017528           23 YAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSA  102 (370)
Q Consensus        23 ~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~  102 (370)
                      ||.+++..|...+.+.++....+.|.+.+.+++.++...  +     .+++++.+....|.++..+++.++++|++|+++
T Consensus         1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~--~-----~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~   73 (260)
T TIGR00950         1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRR--R-----PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPV   73 (260)
T ss_pred             CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHh--c-----cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence            899999999988766899999999999998888776543  2     235667778888888889999999999999999


Q ss_pred             hhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCccccccccccccCCCCcccccccC
Q 017528          103 TLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNSQQIHGHVS  182 (370)
Q Consensus       103 ~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (370)
                      ++++++.++.|+++.+++++++|||++++      +++|+.++++|++++... +                         
T Consensus        74 ~~~~ii~~~~P~~~~~~~~l~~~e~~~~~------~~~gi~i~~~Gv~li~~~-~-------------------------  121 (260)
T TIGR00950        74 GEAALLLYLAPLYVTLLSDLMGKERPRKL------VLLAAVLGLAGAVLLLSD-G-------------------------  121 (260)
T ss_pred             hhhHHHHhhhHHHHHHHHHHHccCCCcHH------HHHHHHHHHHhHHhhccC-C-------------------------
Confidence            99999999999999999999999999999      999999999999998642 1                         


Q ss_pred             CCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-CchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhhHHHHHH
Q 017528          183 SGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYP-SKLLFTTLQCFLSSIQSFAIAIALERDPHEWVLGWNVRLLAVAYC  261 (370)
Q Consensus       183 ~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  261 (370)
                      ..+....|+.+++.++++|+.+.+..|+..++.+ ++.....+++..+.+...+.....+.+. ..   +...|..+++.
T Consensus       122 ~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~---~~~~~~~~~~~  197 (260)
T TIGR00950       122 NLSINPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP-QA---LSLQWGALLYL  197 (260)
T ss_pred             cccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-Cc---chHHHHHHHHH
Confidence            1123357999999999999999999999887764 2334555678888888887765543321 11   34567778889


Q ss_pred             HHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHH
Q 017528          262 GIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGL  323 (370)
Q Consensus       262 g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~  323 (370)
                      +++++.+++.+|++++++.++.+++.+.+++|+++.+++++++||++++.+++|+++++.|+
T Consensus       198 ~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       198 GLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999999999999999999999999999986

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.97  E-value=8.2e-29  Score=228.74  Aligned_cols=278  Identities=12%  Similarity=0.064  Sum_probs=216.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017528           17 ILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFSLDLYGIA   96 (370)
Q Consensus        17 l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a   96 (370)
                      ++-.++-....+..|.+.++-..|..+++.|+.++.+.+.+... ...+++++.+++++...+..|+++ +.++.+.+++
T Consensus         8 ~~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~   85 (302)
T TIGR00817         8 GLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWS-SGLPKRLKISSALLKLLLPVAIVH-TIGHVTSNVS   85 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence            33334444455788998885356999999999998877665521 122334556789999999999997 8889999999


Q ss_pred             HhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCccccccccccccCCCCcc
Q 017528           97 LIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNSQQ  176 (370)
Q Consensus        97 l~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~  176 (370)
                      ++|++++.++++.++.|+++++++++++|||++.+      ++.+++++++|+.+...  +                   
T Consensus        86 l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~------~~~~l~l~~~Gv~l~~~--~-------------------  138 (302)
T TIGR00817        86 LSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPST------LWLSLLPIVGGVALASD--T-------------------  138 (302)
T ss_pred             HHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHhhhcC--C-------------------
Confidence            99999999999999999999999999999999999      99999999999987542  1                   


Q ss_pred             cccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhh--cCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcc---ccc--
Q 017528          177 IHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMK--SYPSKLLFTTLQCFLSSIQSFAIAIALERDPHE---WVL--  249 (370)
Q Consensus       177 ~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~---~~~--  249 (370)
                            +......|++++++++++|+++.+..||..+  +. ++...+.+++..+.+.++|.....+.....   +..  
T Consensus       139 ------~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~-~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~  211 (302)
T TIGR00817       139 ------ELSFNWAGFLSAMISNITFVSRNIFSKKAMTIKSL-DKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAI  211 (302)
T ss_pred             ------cccccHHHHHHHHHHHHHHHHHHHHHHHhhccCCC-CcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhh
Confidence                  1122346999999999999999999999887  55 568999999999999999988765532110   100  


Q ss_pred             --ccc-hhhHHHHHHHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHH
Q 017528          250 --GWN-VRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAV  326 (370)
Q Consensus       250 --~~~-~~~~~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~  326 (370)
                        ... ..+...+..+..+....+.+++.++++.+|++.++..+++|+++.+++++++||+++..+++|+++++.|+.++
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~  291 (302)
T TIGR00817       212 SGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLY  291 (302)
T ss_pred             cccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHH
Confidence              000 11111222232223333345668999999999999999999999999999999999999999999999999999


Q ss_pred             hcCc
Q 017528          327 LWGK  330 (370)
Q Consensus       327 ~~~~  330 (370)
                      ++.|
T Consensus       292 ~~~k  295 (302)
T TIGR00817       292 SRVK  295 (302)
T ss_pred             HHHh
Confidence            7644

specificities overlap.

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.96  E-value=2.1e-27  Score=216.93  Aligned_cols=274  Identities=15%  Similarity=0.164  Sum_probs=203.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhh-cccCCCCCHHHHHHHHHHHHHHHHHHH
Q 017528           12 PYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVE-WKKAPPLSFLTFCKIFFLSLIGITFSL   90 (370)
Q Consensus        12 ~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~   90 (370)
                      ..++.++++++|+..++..|...++ -++.  .+++.....+.+.++...+. ++.++..+++.+. ....+.++...++
T Consensus         2 ~~~~~~~aa~~~a~~~~~~k~~~~~-~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~   77 (281)
T TIGR03340         2 ALTLVVFSALMHAGWNLMAKSHADK-EPDF--LWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWL-LLAISAVANMVYF   77 (281)
T ss_pred             cHHHHHHHHHHHHHHHHHHhhcCCc-hhHH--HHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHH-HHHHHHHHHHHHH
Confidence            3577899999999999999976664 4443  46677777777777765432 2233333334344 4444445558999


Q ss_pred             HHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCcccccccccccc
Q 017528           91 DLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFG  170 (370)
Q Consensus        91 ~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~~~~~~  170 (370)
                      .++++++++.+++.++++.++.|+++.+++++++|||++.+      +++|+.+++.|+.++..++.             
T Consensus        78 ~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~------~~~g~~~~~~Gv~ll~~~~~-------------  138 (281)
T TIGR03340        78 LGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPL------AWLGILIITLGLLVLGLSRF-------------  138 (281)
T ss_pred             HHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHH------HHHHHHHHHHHHHHHhcccc-------------
Confidence            99999999999999999999999999999999999999999      99999999999998874211             


Q ss_pred             CCCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHH-HHHHHH---hcCCCcc
Q 017528          171 HHNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQS-FAIAIA---LERDPHE  246 (370)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~---~~~~~~~  246 (370)
                                  . .....|+.++++++++|++|.+..|+..++.++ ..........+.+.. .+....   .+..  .
T Consensus       139 ------------~-~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~  202 (281)
T TIGR03340       139 ------------A-QHRRKAYAWALAAALGTAIYSLSDKAAALGVPA-FYSALGYLGIGFLAMGWPFLLLYLKRHGR--S  202 (281)
T ss_pred             ------------c-ccchhHHHHHHHHHHHHHHhhhhccccccchhc-ccccHHHHHHHHHHHHHHHHHHHHHHhcc--c
Confidence                        1 112357888999999999999998876544332 221111111222111 222211   1111  1


Q ss_pred             cccccchhhHHHHHHHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHH
Q 017528          247 WVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYA  325 (370)
Q Consensus       247 ~~~~~~~~~~~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l  325 (370)
                      .. .....+..+++.+.+.+.++|.+|++++++.++++++...+++|+++.+++++++||+++..+++|++++++|+++
T Consensus       203 ~~-~~~~~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       203 MF-PYARQILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             hh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            11 1223455667788888999999999999999999999999999999999999999999999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.96  E-value=2.4e-26  Score=210.25  Aligned_cols=295  Identities=21%  Similarity=0.170  Sum_probs=233.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhCCCC-hHHHHHHHHHHHHHHHHHHHhhhhcc-cCCCCCHHHHHHHHHHHHHHHHH
Q 017528           11 RPYLTVILIQAIYAGMFLLSKAAFNGGMN-NFVFIFYRQAFATLFVAPISLAVEWK-KAPPLSFLTFCKIFFLSLIGITF   88 (370)
Q Consensus        11 ~~~l~~l~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~r~~~~~l~l~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~   88 (370)
                      +..++.=..+++-..+.+.+..+.+.|.+ |...+++-++.-.++..++...++++ ++.+.-+++|++.++.+++- ..
T Consensus        13 ~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~D-v~   91 (334)
T PF06027_consen   13 IVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLD-VE   91 (334)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHH-HH
Confidence            34455556667778888888877776666 88888888888888777776664432 22333456788888899998 78


Q ss_pred             HHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCcccccccccc
Q 017528           89 SLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHI  168 (370)
Q Consensus        89 ~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~~~~  168 (370)
                      ++.+.+.|++|++.+.++++.++..+++++++++++|||+++.      +++|+++++.|+.++...|....+.      
T Consensus        92 aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~------~~~gv~i~i~Gv~lv~~sD~~~~~~------  159 (334)
T PF06027_consen   92 ANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWF------HILGVLICIAGVVLVVVSDVLSGSD------  159 (334)
T ss_pred             HHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHH------HHHHHHHHHhhhhheeeeccccccc------
Confidence            8889999999999999999999999999999999999999999      9999999999999888643211000      


Q ss_pred             ccCCCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhcCC-Cccc
Q 017528          169 FGHHNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERD-PHEW  247 (370)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~  247 (370)
                           +       ++..+..+|++++++++++||++++..++..++.+ +.....+..+++.+++.+...+.|.+ ....
T Consensus       160 -----~-------~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~~-~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~  226 (334)
T PF06027_consen  160 -----S-------SSGSNPILGDLLALLGAILYAVSNVLEEKLVKKAP-RVEFLGMLGLFGFIISGIQLAILERSGIESI  226 (334)
T ss_pred             -----C-------CCCCccchhHHHHHHHHHHHHHHHHHHHHhcccCC-HHHHHHHHHHHHHHHHHHHHHheehhhhhcc
Confidence                 0       03456689999999999999999999999998874 68888999999999999888777763 2222


Q ss_pred             ccccchhhHHHHHHHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHh
Q 017528          248 VLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVL  327 (370)
Q Consensus       248 ~~~~~~~~~~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~  327 (370)
                      +... ..+. ++....++...-|.+....++..+|+..++-..+..+++++++++++|+++++..++|.++|++|.+++.
T Consensus       227 ~w~~-~~~~-~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~  304 (334)
T PF06027_consen  227 HWTS-QVIG-LLVGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYN  304 (334)
T ss_pred             CCCh-hhHH-HHHHHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEE
Confidence            2211 2222 2222333566777788889999999999999999999999999999999999999999999999999998


Q ss_pred             cCcchh
Q 017528          328 WGKSKE  333 (370)
Q Consensus       328 ~~~~~~  333 (370)
                      ..+++.
T Consensus       305 ~~~~~~  310 (334)
T PF06027_consen  305 LAESPE  310 (334)
T ss_pred             ccCCcc
Confidence            765543

Some of the sequences in this family are annotated as putative membrane proteins.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.95  E-value=3.9e-26  Score=214.10  Aligned_cols=282  Identities=17%  Similarity=0.142  Sum_probs=219.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhCCCC-hHHHHHHHHHHHHHHHHHHHhhhhcccCCCC--CHHHHHHHHHHHHHHHH
Q 017528           11 RPYLTVILIQAIYAGMFLLSKAAFNGGMN-NFVFIFYRQAFATLFVAPISLAVEWKKAPPL--SFLTFCKIFFLSLIGIT   87 (370)
Q Consensus        11 ~~~l~~l~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~   87 (370)
                      +..++.+.--.+-.......|.+++. ++ |..++.+|++++.++....+.. ..++.++.  .++.+...+..|+++..
T Consensus        49 ~~~~~~~~wy~~s~~~~~~nK~vl~~-~~~P~~l~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~llp~gl~~~~  126 (350)
T PTZ00343         49 KLALLFLTWYALNVLYVVDNKLALNM-LPLPWTISSLQLFVGWLFALLYWAT-GFRKIPRIKSLKLFLKNFLPQGLCHLF  126 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHh-CChhHHHHHHHHHHHHHHHHHHHHh-CCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence            33444444444555667889999997 99 9999999999998876554332 22222333  24577888999999844


Q ss_pred             HHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCccccccccc
Q 017528           88 FSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHH  167 (370)
Q Consensus        88 ~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~~~  167 (370)
                       .+...+.|+++++++.++++.++.|+++++++++++|||++++      ++.++++++.|+.+....            
T Consensus       127 -~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~------~~l~l~l~v~Gv~l~~~~------------  187 (350)
T PTZ00343        127 -VHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLY------AYLSLIPIVGGVALASVK------------  187 (350)
T ss_pred             -HHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHH------HHHHHHHHHHHHHheecc------------
Confidence             4556779999999999999999999999999999999999999      999999999999998742            


Q ss_pred             cccCCCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCC------CchhHHHHHHHHHHHHHHHHHHHhc
Q 017528          168 IFGHHNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYP------SKLLFTTLQCFLSSIQSFAIAIALE  241 (370)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~------~~~~~~~~~~~~~~i~~~~~~~~~~  241 (370)
                                     +......|++++++++++++++++..|+..++.+      ++.+...++...+.++++|+....|
T Consensus       188 ---------------~~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e  252 (350)
T PTZ00343        188 ---------------ELHFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFE  252 (350)
T ss_pred             ---------------cchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence                           1122357999999999999999999999887542      3445666668889999999887655


Q ss_pred             CCC--cccc----cccchhhHHHHHHHHHHHHHHHHHHHH----HHhccCceeEEeccchHHHHHHHHHHHHhcccchhh
Q 017528          242 RDP--HEWV----LGWNVRLLAVAYCGIIVTALTYYLQAW----VIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLG  311 (370)
Q Consensus       242 ~~~--~~~~----~~~~~~~~~l~~~g~~~~~~~~~~~~~----a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~  311 (370)
                      ...  ..+.    ......+..+++ .++.+++++++++.    ++++++|.+.++..+++|+++++++++++||++++.
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~l~-~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~  331 (350)
T PTZ00343        253 GKKWVPVWTNYTANMTNYTKGIIIF-KIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLL  331 (350)
T ss_pred             hHHHHHHHHHhhhcccccchHHHHH-HHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchH
Confidence            321  1110    001112233444 45567899999985    999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhcC
Q 017528          312 RILGGLLLIGGLYAVLWG  329 (370)
Q Consensus       312 ~~iG~~li~~g~~l~~~~  329 (370)
                      +++|+++++.|+++++..
T Consensus       332 ~~iG~~lii~Gv~lYs~~  349 (350)
T PTZ00343        332 GYLGMAVAILGALLYSLF  349 (350)
T ss_pred             hHHHHHHHHHHHHHHhhc
Confidence            999999999999998764

>TIGR00688 rarD rarD protein

Probab=99.95  E-value=1.7e-25  Score=201.81  Aligned_cols=248  Identities=11%  Similarity=0.049  Sum_probs=184.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcc-----cCCCCCHHH-HHHHHHHHHH
Q 017528           11 RPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWK-----KAPPLSFLT-FCKIFFLSLI   84 (370)
Q Consensus        11 ~~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~-----~~~~~~~~~-~~~~~~~g~~   84 (370)
                      +|++++++++++||.++++.|. .++ ++|.++.++|++++.+++.++...++++     +.++.++++ +......|++
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~~-~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   79 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LKP-LPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL   79 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hcc-CCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence            5889999999999999999998 454 9999999999999998887765443221     111112222 4445667766


Q ss_pred             HHHHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCcccccc
Q 017528           85 GITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLC  164 (370)
Q Consensus        85 ~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~  164 (370)
                      . +.++.++++|++++++++++++.++.|+++++++++++|||++++      ++++++++++|++++..++        
T Consensus        80 ~-~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~------~~l~~~~~~~Gv~li~~~~--------  144 (256)
T TIGR00688        80 I-GFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRF------QFIAVIIATLGVISNIVLK--------  144 (256)
T ss_pred             H-HHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH------HHHHHHHHHHHHHHHHHHc--------
Confidence            5 899999999999999999999999999999999999999999999      9999999999999876421        


Q ss_pred             ccccccCCCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhcCCC
Q 017528          165 HHHIFGHHNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDP  244 (370)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  244 (370)
                                        .+.     ..++++++++|+.|.+..|+..++ +. ...... .........+.....+...
T Consensus       145 ------------------~~~-----~~~~l~aa~~~a~~~i~~~~~~~~-~~-~~~~~~-~~~~~~~~~~~~~~~~~~~  198 (256)
T TIGR00688       145 ------------------GSL-----PWEALVLAFSFTAYGLIRKALKNT-DL-AGFCLE-TLSLMPVAIYYLLQTDFAT  198 (256)
T ss_pred             ------------------CCc-----hHHHHHHHHHHHHHHHHHhhcCCC-Cc-chHHHH-HHHHHHHHHHHHHHhccCc
Confidence                              111     135788999999999999987543 22 222211 1122222222111111111


Q ss_pred             cccccccchhhHHHHHHHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHH
Q 017528          245 HEWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFL  303 (370)
Q Consensus       245 ~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~  303 (370)
                       ....+....|..+++.|++ +.++|.++++++++.++++++...+++|+++.+++.++
T Consensus       199 -~~~~~~~~~~~~l~~~g~~-t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       199 -VQQTNPFPIWLLLVLAGLI-TGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             -ccccCchhHHHHHHHHHHH-HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence             1111122367888888876 88999999999999999999999999999999999764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.93  E-value=5e-23  Score=188.79  Aligned_cols=283  Identities=23%  Similarity=0.309  Sum_probs=218.1

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHH
Q 017528            8 DKQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGIT   87 (370)
Q Consensus         8 ~~~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   87 (370)
                      +...+....++.++.|+......|...++..++....+.|...+.+...+.... ++...++. .+.+.+..+.+.++..
T Consensus         4 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~   81 (292)
T COG0697           4 ALLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLL-EPRGLRPA-LRPWLLLLLLALLGLA   81 (292)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHh-hccccccc-ccchHHHHHHHHHHHH
Confidence            345678888999999999999999887743566666677999888884433322 11111111 1224556677777779


Q ss_pred             HHHHHHHHHHhhcChhhHhhhccchhHHHHHHHH-HHhhccccccccCccchhhhHHHHHhhhhhhhhccCCcccccccc
Q 017528           88 FSLDLYGIALIYTSATLAAATTNCLPAITFFLAV-LLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHH  166 (370)
Q Consensus        88 ~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~-l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~~  166 (370)
                      ..+.+++.++++++++.++++.++.|+++.++++ +++|||++++      ++.++.+++.|++++..++...       
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~------~~~~~~~~~~Gv~lv~~~~~~~-------  148 (292)
T COG0697          82 LPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLL------QILGILLALAGVLLILLGGGGG-------  148 (292)
T ss_pred             HHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHH------HHHHHHHHHHhHHheecCCCcc-------
Confidence            9999999999999999999999999999999997 6679999999      9999999999999998643210       


Q ss_pred             ccccCCCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHH-HHHHHHHHHHHHHHHHhcCCCc
Q 017528          167 HIFGHHNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTT-LQCFLSSIQSFAIAIALERDPH  245 (370)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~  245 (370)
                                      ... ...|+.+.+.++++++++.+..|+.. +. ++..... +..........+.  ...... 
T Consensus       149 ----------------~~~-~~~g~~~~l~a~~~~a~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~-  206 (292)
T COG0697         149 ----------------GIL-SLLGLLLALAAALLWALYTALVKRLS-RL-GPVTLALLLQLLLALLLLLLF--FLSGFG-  206 (292)
T ss_pred             ----------------hhH-HHHHHHHHHHHHHHHHHHHHHHHHhc-CC-ChHHHHHHHHHHHHHHHHHHH--Hhcccc-
Confidence                            011 46899999999999999999999887 43 3345554 3433222222221  111111 


Q ss_pred             ccccccchhhHHHHHHHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHH
Q 017528          246 EWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYA  325 (370)
Q Consensus       246 ~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l  325 (370)
                        .......+..+.+.|++.+++++.++++++++.++..++.+.+++|+++.++++++++|+++..+++|+++++.|+.+
T Consensus       207 --~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l  284 (292)
T COG0697         207 --APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLL  284 (292)
T ss_pred             --ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHH
Confidence              122345688889999998989999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhcC
Q 017528          326 VLWG  329 (370)
Q Consensus       326 ~~~~  329 (370)
                      ...+
T Consensus       285 ~~~~  288 (292)
T COG0697         285 ASLR  288 (292)
T ss_pred             Hhcc
Confidence            8654

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.92  E-value=1.3e-22  Score=176.85  Aligned_cols=282  Identities=15%  Similarity=0.098  Sum_probs=227.5

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccC-C--CCCHHHHHHHHHHHHH
Q 017528            8 DKQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKA-P--PLSFLTFCKIFFLSLI   84 (370)
Q Consensus         8 ~~~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~-~--~~~~~~~~~~~~~g~~   84 (370)
                      +..+|+++.+.+.++||..+...|.+ ++ .++.++...|.+-+.++++.+....++++. .  ..+++.+....+.+++
T Consensus         4 ~~~~Gil~~l~Ay~lwG~lp~y~kll-~~-~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l   81 (293)
T COG2962           4 DSRKGILLALLAYLLWGLLPLYFKLL-EP-LPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL   81 (293)
T ss_pred             cccchhHHHHHHHHHHHHHHHHHHHH-cc-CCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH
Confidence            45689999999999999999999965 54 999999999999999888776655333221 1  1245667767777766


Q ss_pred             HHHHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCcccccc
Q 017528           85 GITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLC  164 (370)
Q Consensus        85 ~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~  164 (370)
                      . ..++..|.+|.+....-+++.-++..|++.++++.+++|||+++.      |++++.++.+||.......|       
T Consensus        82 i-~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~------Q~iAV~lA~~GV~~~~~~~g-------  147 (293)
T COG2962          82 I-GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRL------QWIAVGLAAAGVLIQTWLLG-------  147 (293)
T ss_pred             H-HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHH------HHHHHHHHHHHHHHHHHHcC-------
Confidence            6 899999999999999999999999999999999999999999999      99999999999999887422       


Q ss_pred             ccccccCCCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhcCCC
Q 017528          165 HHHIFGHHNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDP  244 (370)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  244 (370)
                                         +-+     ..++.-++.|+.|...-|+..-   ++.+-....+..-.+..+...++.+...
T Consensus       148 -------------------~lp-----wval~la~sf~~Ygl~RK~~~v---~a~~g~~lE~l~l~p~al~yl~~l~~~~  200 (293)
T COG2962         148 -------------------SLP-----WVALALALSFGLYGLLRKKLKV---DALTGLTLETLLLLPVALIYLLFLADSG  200 (293)
T ss_pred             -------------------CCc-----HHHHHHHHHHHHHHHHHHhcCC---chHHhHHHHHHHHhHHHHHHHHHHhcCc
Confidence                               111     2445568899999988665432   3466666677776776666666655543


Q ss_pred             cccccccchhhHHHHHHHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHH
Q 017528          245 HEWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLY  324 (370)
Q Consensus       245 ~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~  324 (370)
                      +.....+...+..++..|. .|+++..++..+.++++-+..+.++|.+|..-.+++++++||+++..+++..+.|-+|++
T Consensus       201 ~~~~~~~~~~~~LLv~aG~-vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~  279 (293)
T COG2962         201 QFLQQNANSLWLLLVLAGL-VTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALA  279 (293)
T ss_pred             hhhhcCCchHHHHHHHhhH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHH
Confidence            3122234556777777776 599999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcCcchh
Q 017528          325 AVLWGKSKE  333 (370)
Q Consensus       325 l~~~~~~~~  333 (370)
                      ++.++.-++
T Consensus       280 l~~~d~l~~  288 (293)
T COG2962         280 LFSIDGLYT  288 (293)
T ss_pred             HHHHHHHHH
Confidence            998765443

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.91  E-value=1.9e-22  Score=171.09  Aligned_cols=274  Identities=15%  Similarity=0.097  Sum_probs=228.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 017528           12 PYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFSLD   91 (370)
Q Consensus        12 ~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   91 (370)
                      +++.++.+....-....+.|.++.. .++...+.+|..++.++++++..-    .+.+.+++++......|+.. +..|.
T Consensus        13 p~~~ll~amvsiq~Gas~Ak~LFP~-vG~~g~t~lRl~~aaLIll~l~RP----wr~r~~~~~~~~~~~yGvsL-g~MNl   86 (292)
T COG5006          13 PILALLVAMVSIQSGASFAKSLFPL-VGAAGVTALRLAIAALILLALFRP----WRRRLSKPQRLALLAYGVSL-GGMNL   86 (292)
T ss_pred             cHHHHHHHHHHHHhhHHHHHHHccc-cChhhHHHHHHHHHHHHHHHHhhH----HHhccChhhhHHHHHHHHHH-HHHHH
Confidence            5888888888888888999999998 999999999999999999887532    23456788999999999887 88999


Q ss_pred             HHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCccccccccccccC
Q 017528           92 LYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGH  171 (370)
Q Consensus        92 ~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~~~~~~~  171 (370)
                      +||.+++..|.+.+..+.++.|+..++++-    +  +.+      +.+.+.+++.|+.++.- .+..            
T Consensus        87 ~FY~si~riPlGiAVAiEF~GPL~vA~~~s----R--r~~------d~vwvaLAvlGi~lL~p-~~~~------------  141 (292)
T COG5006          87 LFYLSIERIPLGIAVAIEFTGPLAVALLSS----R--RLR------DFVWVALAVLGIWLLLP-LGQS------------  141 (292)
T ss_pred             HHHHHHHhccchhhhhhhhccHHHHHHHhc----c--chh------hHHHHHHHHHHHHhhee-ccCC------------
Confidence            999999999999999999999999988853    1  124      77888889999888763 2211            


Q ss_pred             CCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhcCCCccccccc
Q 017528          172 HNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHEWVLGW  251 (370)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  251 (370)
                                 ....+..|..+++.++.||++|++..+|..+.. +...-+...+..+.++.+|+...... .   ....
T Consensus       142 -----------~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~-~g~~g~a~gm~vAaviv~Pig~~~ag-~---~l~~  205 (292)
T COG5006         142 -----------VWSLDPVGVALALGAGACWALYIVLGQRAGRAE-HGTAGVAVGMLVAALIVLPIGAAQAG-P---ALFS  205 (292)
T ss_pred             -----------cCcCCHHHHHHHHHHhHHHHHHHHHcchhcccC-CCchHHHHHHHHHHHHHhhhhhhhcc-h---hhcC
Confidence                       233446899999999999999999999988644 34678888999999999998854222 1   1223


Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHhcCcc
Q 017528          252 NVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLWGKS  331 (370)
Q Consensus       252 ~~~~~~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~  331 (370)
                      +.-...-+.+|++++.+.|.+-..++++.++...+.+.++||.++.+.+++++||.+|..||+|+++++.+..-.++..+
T Consensus       206 p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~  285 (292)
T COG5006         206 PSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTAR  285 (292)
T ss_pred             hHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccC
Confidence            44566678889999999999999999999999999999999999999999999999999999999999999887766444


Q ss_pred             h
Q 017528          332 K  332 (370)
Q Consensus       332 ~  332 (370)
                      |
T Consensus       286 ~  286 (292)
T COG5006         286 K  286 (292)
T ss_pred             C
Confidence            3

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.90  E-value=2e-21  Score=177.77  Aligned_cols=274  Identities=13%  Similarity=0.086  Sum_probs=208.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 017528           12 PYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFSLD   91 (370)
Q Consensus        12 ~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   91 (370)
                      ++++.++++++||+..+..|...  |.++.+..  |..++.+++..+....+ .++ ...++.+...++.|++. ..++.
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~~--g~~~~~~~--~~~~g~l~~~~~~~~~~-~~~-~~~~~~~~~g~l~G~~w-~ig~~   74 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKIG--GGPYSQTL--GTTFGALILSIAIAIFV-LPE-FWALSIFLVGLLSGAFW-ALGQI   74 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhccC--CCHHHHHH--HHHHHHHHHHHHHHHHh-CCc-ccccHHHHHHHHHHHHH-Hhhhh
Confidence            57889999999999999999765  47887765  77777777766554422 212 12355566677777776 88999


Q ss_pred             HHHHHHhhcChhhHhhhcc-chhHHHHHHHHHHhhccccccccCccch----hhhHHHHHhhhhhhhhccCCcccccccc
Q 017528           92 LYGIALIYTSATLAAATTN-CLPAITFFLAVLLRMEVLKLKTVPGVAK----LVGILICIGGAATLAFYNGPQLRLLCHH  166 (370)
Q Consensus        92 ~~~~al~~~~~~~~~~i~~-~~pi~~~ll~~l~~~e~~~~~~~~~~~~----~~~i~l~~~Gv~li~~~~~~~~~~~~~~  166 (370)
                      +|+.++++++.+.+..+.+ +.+++..+.+.+++|||.+.+      +    ++|++++++|++++...++++.+.    
T Consensus        75 ~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~------~~~~~~~g~~l~l~G~~l~~~~~~~~~~~----  144 (290)
T TIGR00776        75 NQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSI------QTLLGLLALILIIIGVYLTSRSKDKSAGI----  144 (290)
T ss_pred             hHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchH------HHHHHHHHHHHHHHhHheEEecccccccc----
Confidence            9999999999999999997 899999999999999999998      8    999999999998876432111000    


Q ss_pred             ccccCCCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHH---HHHHHHHHHHHHhcCC
Q 017528          167 HIFGHHNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCF---LSSIQSFAIAIALERD  243 (370)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~~  243 (370)
                                   +  +..+..+|.+++++++++|+.|.+..|+..  + +|...++.+..   .+.++..+..  . .+
T Consensus       145 -------------~--~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~~--~-~~~~~~~~~~~g~~~~~~~~~~~~--~-~~  203 (290)
T TIGR00776       145 -------------K--SEFNFKKGILLLLMSTIGYLVYVVVAKAFG--V-DGLSVLLPQAIGMVIGGIIFNLGH--I-LA  203 (290)
T ss_pred             -------------c--cccchhhHHHHHHHHHHHHHHHHHHHHHcC--C-CcceehhHHHHHHHHHHHHHHHHH--h-cc
Confidence                         0  002346799999999999999999999762  4 45777444444   3333332222  1 11


Q ss_pred             CcccccccchhhHHHHHHHHHHHHHHHHHHHHHHh-ccCceeEEeccchHHHHHHHHHHHHhcccchhhhH----HHHHH
Q 017528          244 PHEWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIE-KKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRI----LGGLL  318 (370)
Q Consensus       244 ~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~a~~-~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~----iG~~l  318 (370)
                       +++  .+...+. .+..|++ ..+++.+|..+.+ +.+++..+.+...+|+.+.+++++++||+.++.++    +|+++
T Consensus       204 -~~~--~~~~~~~-~~~~Gi~-~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~l  278 (290)
T TIGR00776       204 -KPL--KKYAILL-NILPGLM-WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIIL  278 (290)
T ss_pred             -cch--HHHHHHH-HHHHHHH-HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHH
Confidence             111  1222333 3447887 7999999999999 99999999999999999999999999999999999    99999


Q ss_pred             HHHHHHHHhc
Q 017528          319 LIGGLYAVLW  328 (370)
Q Consensus       319 i~~g~~l~~~  328 (370)
                      ++.|+.+...
T Consensus       279 Ii~~~~l~~~  288 (290)
T TIGR00776       279 IIIAANILGI  288 (290)
T ss_pred             HHHHHHHHhc
Confidence            9999998754

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.88  E-value=1.9e-23  Score=178.18  Aligned_cols=288  Identities=13%  Similarity=0.063  Sum_probs=214.9

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHH
Q 017528           10 QRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFS   89 (370)
Q Consensus        10 ~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   89 (370)
                      .+|.++..++ ..+.+..++.+...+  .+|....-.|+++-.+...+..++.....+-  +.....++++.|+.| ..+
T Consensus        37 ~~gl~l~~vs-~ff~~~~vv~t~~~e--~~p~e~a~~r~l~~mlit~pcliy~~~~v~g--p~g~R~~LiLRg~mG-~tg  110 (346)
T KOG4510|consen   37 NLGLLLLTVS-YFFNSCMVVSTKVLE--NDPMELASFRLLVRMLITYPCLIYYMQPVIG--PEGKRKWLILRGFMG-FTG  110 (346)
T ss_pred             ccCceehhhH-HHHhhHHHhhhhhhc--cChhHhhhhhhhhehhhhheEEEEEeeeeec--CCCcEEEEEeehhhh-hhH
Confidence            4566777777 444444444444444  7899999999888888877776653333211  223344567788888 556


Q ss_pred             HHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCcccccc-cccc
Q 017528           90 LDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLC-HHHI  168 (370)
Q Consensus        90 ~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~-~~~~  168 (370)
                      ....|||++|.+.+++.++....|+++.+++|+++||++++.      +.++..+.+.||+++..+. -..+++. ++++
T Consensus       111 vmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~------eaL~s~itl~GVVLIvRPp-FlFG~~t~g~~~  183 (346)
T KOG4510|consen  111 VMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKF------EALGSLITLLGVVLIVRPP-FLFGDTTEGEDS  183 (346)
T ss_pred             HHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHH------HHHHHHHhhheEEEEecCC-cccCCCcccccc
Confidence            667788999999999999999999999999999999999999      9999999999999998642 1111110 0110


Q ss_pred             ccCCCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccc
Q 017528          169 FGHHNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHEWV  248 (370)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  248 (370)
                      .             .....+.|...++.++++-|-..++.|+..|+.+. .....+....+.+.+++.....+.  .++ 
T Consensus       184 s-------------~~~~~~~gt~aai~s~lf~asvyIilR~iGk~~h~-~msvsyf~~i~lV~s~I~~~~ig~--~~l-  246 (346)
T KOG4510|consen  184 S-------------QVEYDIPGTVAAISSVLFGASVYIILRYIGKNAHA-IMSVSYFSLITLVVSLIGCASIGA--VQL-  246 (346)
T ss_pred             c-------------cccccCCchHHHHHhHhhhhhHHHHHHHhhccccE-EEEehHHHHHHHHHHHHHHhhccc--eec-
Confidence            0             11334567888888888888888888888787653 555666666666666654433331  112 


Q ss_pred             cccchhhHHHHHHHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHhc
Q 017528          249 LGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLW  328 (370)
Q Consensus       249 ~~~~~~~~~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~  328 (370)
                      .....+|+.++.+|++ +.+++.+...++++..+..++++.+.+.++++++.+++||+.|+++.+.|+++++.+.++...
T Consensus       247 P~cgkdr~l~~~lGvf-gfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~  325 (346)
T KOG4510|consen  247 PHCGKDRWLFVNLGVF-GFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVAL  325 (346)
T ss_pred             CccccceEEEEEehhh-hhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHH
Confidence            1245677778888885 779999999999999999999999999999999999999999999999999999999888754

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.84  E-value=2.5e-18  Score=158.66  Aligned_cols=278  Identities=17%  Similarity=0.171  Sum_probs=213.6

Q ss_pred             HHHHHHHhC-CCC--hHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhh
Q 017528           28 LLSKAAFNG-GMN--NFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSATL  104 (370)
Q Consensus        28 ~~~k~~~~~-~~~--~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~  104 (370)
                      +......+. ...  |..+++.++.+..++..+.....+++   +.++..+...+..+++. .++..+-+.|++|++...
T Consensus        17 ~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~al~~i~~p~   92 (303)
T PF08449_consen   17 ILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFP---KSRKIPLKKYAILSFLF-FLASVLSNAALKYISYPT   92 (303)
T ss_pred             HHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcccc---CCCcChHHHHHHHHHHH-HHHHHHHHHHHHhCChHH
Confidence            444444433 233  88999999999888777765543312   22334455666677666 778888899999999999


Q ss_pred             HhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCccccccccccccCCCCcccccccCCC
Q 017528          105 AAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNSQQIHGHVSSG  184 (370)
Q Consensus       105 ~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (370)
                      ..++.++.|+.+++++.+++|+|.+.+      ++.++++..+|+++....+....+.           ++     . ..
T Consensus        93 ~~~~ks~~~i~vmi~~~l~~~k~y~~~------~~~~v~li~~Gv~~~~~~~~~~~~~-----------~~-----~-~~  149 (303)
T PF08449_consen   93 QIVFKSSKPIPVMILGVLILGKRYSRR------QYLSVLLITIGVAIFTLSDSSSSSS-----------SN-----S-SS  149 (303)
T ss_pred             HHHHhhhHHHHHHHHHHHhcCccccHH------HHHHHHHHHhhHheeeecccccccc-----------cc-----c-cc
Confidence            999999999999999999999999999      9999999999999988643221110           00     0 22


Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-CchhHHHHHHHHHHHHHHHHHHH--hcCCCc--ccccccchhhHHHH
Q 017528          185 KTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYP-SKLLFTTLQCFLSSIQSFAIAIA--LERDPH--EWVLGWNVRLLAVA  259 (370)
Q Consensus       185 ~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~--~~~~~~~~~~~~l~  259 (370)
                      .++..|+++.+++.++.+...+.+++..++++ ++.+.+++...++.+..++....  .+...+  ++....+..+..++
T Consensus       150 ~~~~~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~  229 (303)
T PF08449_consen  150 FSSALGIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLL  229 (303)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHH
Confidence            22334999999999999999999999987766 66899999999999988887766  222111  11122333344444


Q ss_pred             HHHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHhcCcchh
Q 017528          260 YCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLWGKSKE  333 (370)
Q Consensus       260 ~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~~~  333 (370)
                      ... +++.++..+.+...++.++...+.+..++.+++++++++++|+++++.+|+|.++++.|..++.+.++|+
T Consensus       230 ~~s-~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~  302 (303)
T PF08449_consen  230 LFS-LTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK  302 (303)
T ss_pred             HHH-HHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence            444 4677888888899999999999999999999999999999999999999999999999999998766554

; GO: 0055085 transmembrane transport

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.80  E-value=1.4e-18  Score=155.69  Aligned_cols=296  Identities=17%  Similarity=0.213  Sum_probs=225.7

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHhCCC--ChHHHHHHHHHHHHHHHHHHH----hh-----h---------------
Q 017528            9 KQRPYLTVILIQAIYAGMFLLSKAAFNGGM--NNFVFIFYRQAFATLFVAPIS----LA-----V---------------   62 (370)
Q Consensus         9 ~~~~~l~~l~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~r~~~~~l~l~~~~----~~-----~---------------   62 (370)
                      ...|+.++++..++|-.+.-+.+...+++-  .|+..++...-.-.+.+.++.    .+     |               
T Consensus        12 ~~lGl~lL~~V~viWV~SSeLT~~if~~~~f~kPFfiTY~~ts~fivYL~~~~~~d~~~~~~~~R~~~~~~~~~~e~d~e   91 (416)
T KOG2765|consen   12 WTLGLVLLLLVVVIWVASSELTQSIFEDYNFRKPFFITYLKTSLFIVYLPPFILIDAPWRILETRSKRSNHAIMEEADAE   91 (416)
T ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHHHhhcccCCceeEeeecccceehhhhhhhhhcchhhhhhhhccccchhhhhhhhhh
Confidence            457999999999999999999999988622  377766655443333333322    00     0               


Q ss_pred             -----------------------------hc--------------ccCCCCCH------------HHHHHHHHHHHHHHH
Q 017528           63 -----------------------------EW--------------KKAPPLSF------------LTFCKIFFLSLIGIT   87 (370)
Q Consensus        63 -----------------------------~~--------------~~~~~~~~------------~~~~~~~~~g~~~~~   87 (370)
                                                   ..              .+.+...+            +.....+....+. .
T Consensus        92 ~y~~~~~~~~~~~~~l~~~~~~~~~~~~l~s~~~~~~~s~~~e~~~~~~~~~rs~l~~~~~~t~~~~ak~sl~fc~lW-F  170 (416)
T KOG2765|consen   92 GYFSACTTDKTMESGLSGPESVPDKSPLLGSGEEEKPESTNLEVREKANTKKRSNLKERGKLTATQTAKLSLFFCPLW-F  170 (416)
T ss_pred             ccccccccccccccccCCceeeeccccccccccccCCCCccccccccCCcccccchhhhhhhHHHHHHHHHHHHHHHH-H
Confidence                                         00              00000011            2334445666676 7


Q ss_pred             HHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCccccccccc
Q 017528           88 FSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHH  167 (370)
Q Consensus        88 ~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~~~  167 (370)
                      +.++.++.|+.+++++...++.+++-+|+..++.++..||++..      |++++++++.|++++...+..+.++     
T Consensus       171 ~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~s------Kllav~~si~GViiVt~~~s~~~~~-----  239 (416)
T KOG2765|consen  171 LANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLS------KLLAVFVSIAGVIIVTMGDSKQNSD-----  239 (416)
T ss_pred             HHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHH------HHHHHHHhhccEEEEEecccccccc-----
Confidence            88889999999999999999999999999999999999999999      9999999999999998753322110     


Q ss_pred             cccCCCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCch---hHHHHHHHHHHHHHHHHHHHhcC-C
Q 017528          168 IFGHHNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKL---LFTTLQCFLSSIQSFAIAIALER-D  243 (370)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~-~  243 (370)
                              .      .+.....|+++++++++.||+|.++.||...+.+...   ....+..++..+++.|..++.+. .
T Consensus       240 --------~------~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~  305 (416)
T KOG2765|consen  240 --------L------PASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFG  305 (416)
T ss_pred             --------C------CccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhc
Confidence                    0      4455679999999999999999999999887764223   23334444555666665555433 2


Q ss_pred             CcccccccchhhHHHHHHHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHH
Q 017528          244 PHEWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGL  323 (370)
Q Consensus       244 ~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~  323 (370)
                      .+.+..+...+...+++.++++++++-++|.+|.-.++|..+++-..++...+++.+.++-|.++++.+++|...|++|.
T Consensus       306 ~e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~F  385 (416)
T KOG2765|consen  306 EERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGF  385 (416)
T ss_pred             cCcccCCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHH
Confidence            33455566667778888899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCc
Q 017528          324 YAVLWGK  330 (370)
Q Consensus       324 ~l~~~~~  330 (370)
                      +..+...
T Consensus       386 v~vn~~~  392 (416)
T KOG2765|consen  386 VIVNISS  392 (416)
T ss_pred             hheeccc
Confidence            9987643

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.76  E-value=2.8e-18  Score=155.24  Aligned_cols=273  Identities=17%  Similarity=0.172  Sum_probs=217.9

Q ss_pred             HHHHHHHHHhC-CC-ChHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChh
Q 017528           26 MFLLSKAAFNG-GM-NNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSAT  103 (370)
Q Consensus        26 ~~~~~k~~~~~-~~-~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~  103 (370)
                      .....|..++. |+ -|..++.++.+.+.+........+..+..+..++..+...+.+|++. +++..+-+.|+.|.+++
T Consensus        32 ~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~-~~~~v~~n~Sl~~v~Vs  110 (316)
T KOG1441|consen   32 VIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVF-CISHVLGNVSLSYVPVS  110 (316)
T ss_pred             eEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHH-HHHHHhcchhhhccchh
Confidence            34567888773 23 38899999888888887777665444333333456688888888887 88899999999999999


Q ss_pred             hHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCccccccccccccCCCCcccccccCC
Q 017528          104 LAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNSQQIHGHVSS  183 (370)
Q Consensus       104 ~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (370)
                      .++.+..+.|++++++++++.+|+.+..      .+..+.....|+.+.+..                           +
T Consensus       111 F~q~iKa~~P~~tvl~~~~~~~~~~s~~------~~lsL~piv~GV~ias~~---------------------------e  157 (316)
T KOG1441|consen  111 FYQTIKALMPPFTVLLSVLLLGKTYSSM------TYLSLLPIVFGVAIASVT---------------------------E  157 (316)
T ss_pred             HHHHHHhhcchhHHHHHHHHhCCCCcce------EEEEEEEeeeeEEEeeec---------------------------c
Confidence            9999999999999999999999999999      999999999999998752                           3


Q ss_pred             CcchHHHHHHHHHHHHHHHHHHHHHHHHhh--cCC-CchhHHHHHHHHHHHHHH-HHHHHhcCCCc---ccccccchhhH
Q 017528          184 GKTWIKGCFIMLSSNTSFGLWLVLQGFVMK--SYP-SKLLFTTLQCFLSSIQSF-AIAIALERDPH---EWVLGWNVRLL  256 (370)
Q Consensus       184 ~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~--~~~-~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~---~~~~~~~~~~~  256 (370)
                      .+-...|...++.+.+..+..+++.++..+  +.+ |+.+...++...+.+.++ |.....+++..   ... .......
T Consensus       158 ~~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~-~~~~~~~  236 (316)
T KOG1441|consen  158 LSFNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTA-PWFVTFL  236 (316)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeecc-ccchhhH
Confidence            334568999999999999999999999884  333 779999999999999999 87766666433   110 1112233


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHhcCcchhh
Q 017528          257 AVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLWGKSKEQ  334 (370)
Q Consensus       257 ~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~~~~  334 (370)
                      ...+..+ +........+..+.+++|.+.++.+...-++.++.++++|+++.++.+..|.++.++|+++|++.|.+++
T Consensus       237 ~~~~~sv-~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~  313 (316)
T KOG1441|consen  237 ILLLNSV-LAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEK  313 (316)
T ss_pred             HHHHHHH-HHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhh
Confidence            3444443 3444455667889999999999999999999999999999999999999999999999999988766543

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.72  E-value=7.1e-17  Score=123.05  Aligned_cols=135  Identities=18%  Similarity=0.186  Sum_probs=123.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccCC-CCCHHHHHHHHHHHHHHHHHH
Q 017528           11 RPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAP-PLSFLTFCKIFFLSLIGITFS   89 (370)
Q Consensus        11 ~~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~   89 (370)
                      ...+++++++++||...++.|...++ +||...++.|..+...++..+....++.... ..++|.|....+.|+.+ +++
T Consensus         3 ~~~~~ALLsA~fa~L~~iF~KIGl~~-vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~-gls   80 (140)
T COG2510           3 AAIIYALLSALFAGLTPIFAKIGLEG-VDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAG-GLS   80 (140)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhccc-cCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHH-HHH
Confidence            46889999999999999999999995 9999999999999999999888775544332 35788899999999777 999


Q ss_pred             HHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhh
Q 017528           90 LDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLA  153 (370)
Q Consensus        90 ~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~  153 (370)
                      +.+||.|++...++.+.++-.++|+++++++++++|||++..      +|+|+.++.+|+++++
T Consensus        81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~------~~iG~~LI~~Gailvs  138 (140)
T COG2510          81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLP------TWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHH------HHHHHHHHHhCeeeEe
Confidence            999999999999999999999999999999999999999999      9999999999998875

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.70  E-value=6.2e-14  Score=126.24  Aligned_cols=297  Identities=19%  Similarity=0.177  Sum_probs=218.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhCC---CChHHHHHHHHHHHHHHHHHHHhhhhcc----cCCCC------CHHHHHH
Q 017528           11 RPYLTVILIQAIYAGMFLLSKAAFNGG---MNNFVFIFYRQAFATLFVAPISLAVEWK----KAPPL------SFLTFCK   77 (370)
Q Consensus        11 ~~~l~~l~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~r~~~~~l~l~~~~~~~~~~----~~~~~------~~~~~~~   77 (370)
                      .-++.++...+.++......|.....+   +.|...+++--.+-.++.....+...+.    ..+..      .+++..+
T Consensus        15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk   94 (345)
T KOG2234|consen   15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK   94 (345)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence            557778888899999999999887655   7788888888888888877777664322    11111      3445555


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccC
Q 017528           78 IFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNG  157 (370)
Q Consensus        78 ~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~  157 (370)
                      ..+-+++. .+.+-++|.++.+.+++..++..++-.+.|+++..+++++|++++      ||.++++.+.|+.++..+..
T Consensus        95 ~~vPa~iY-alqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~------Qw~Al~lL~~Gv~~vQ~~~~  167 (345)
T KOG2234|consen   95 VSVPALIY-ALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRL------QWMALVLLFAGVALVQLPSL  167 (345)
T ss_pred             HHHHHHHH-HHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHH------HHHHHHHHHHHHHHHhccCC
Confidence            66666666 777779999999999999999999999999999999999999999      99999999999999874322


Q ss_pred             CccccccccccccCCCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHH-HHHHHHHHH
Q 017528          158 PQLRLLCHHHIFGHHNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCF-LSSIQSFAI  236 (370)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~  236 (370)
                      +..+.               ++ +....+...|....+.+++..+...++-++..|+.+.+..+--.++. ++.+..+..
T Consensus       168 ~~~~a---------------~~-~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~  231 (345)
T KOG2234|consen  168 SPTGA---------------KS-ESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLT  231 (345)
T ss_pred             CCCCc---------------cC-CCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHH
Confidence            21110               00 11456778999999999999999999999999886643444333333 333333333


Q ss_pred             HHHhcCCCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHH
Q 017528          237 AIALERDPHEWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGG  316 (370)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~  316 (370)
                      .+..+.+...| ..--..|-...+.-++..+.+-.+.....|+.+-..=+....+..+++.+.++.+++-++|....+|.
T Consensus       232 ~~~~d~~~i~~-~gff~G~s~~vw~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~  310 (345)
T KOG2234|consen  232 ILLQDGEAINE-YGFFYGYSSIVWLVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGA  310 (345)
T ss_pred             Hhhcccccccc-CCccccccHHHHHHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHH
Confidence            33332222111 11122334444444556666667777788888887777888899999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCcc
Q 017528          317 LLLIGGLYAVLWGKS  331 (370)
Q Consensus       317 ~li~~g~~l~~~~~~  331 (370)
                      .+++.++.++...+.
T Consensus       311 ~lVi~Si~lY~~~P~  325 (345)
T KOG2234|consen  311 LLVILSIFLYSLYPA  325 (345)
T ss_pred             HHHHHHHHHhhcCCc
Confidence            999999999984333

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.67  E-value=1.2e-14  Score=122.49  Aligned_cols=257  Identities=18%  Similarity=0.171  Sum_probs=196.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHhhhccchhHHHHHH
Q 017528           40 NFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFL  119 (370)
Q Consensus        40 ~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll  119 (370)
                      ...++|+++....++.-.+..++.+.+   .+...-+....++. .+.+....-+.|++|.|-....+-.++-|+=++++
T Consensus        53 alaLVf~qC~~N~vfAkvl~~ir~~~~---~D~t~~~~YaAcs~-sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMil  128 (337)
T KOG1580|consen   53 ALALVFFQCTANTVFAKVLFLIRKKTE---IDNTPTKMYAACSA-SYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMIL  128 (337)
T ss_pred             HHHHHHHHHHHHHHHHHhheeeccccc---ccCCcchHHHHHHH-HHHHHHHhccchhcccCCcHHHhcccCCCcceeee
Confidence            456667777777666655444433221   11111222333332 23555666679999999999889999999999999


Q ss_pred             HHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCccccccccccccCCCCcccccccCCCcchHHHHHHHHHHHH
Q 017528          120 AVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNSQQIHGHVSSGKTWIKGCFIMLSSNT  199 (370)
Q Consensus       120 ~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~  199 (370)
                      +.++.|.+.+++      +..+++++++||++..+.++...+.                    .+.....|.++.+++-.
T Consensus       129 GVl~~~KsY~w~------kY~cVL~IV~GValFmYK~~Kv~g~--------------------e~~t~g~GElLL~lSL~  182 (337)
T KOG1580|consen  129 GVLFAHKSYHWR------KYCCVLMIVVGVALFMYKENKVGGA--------------------EDKTFGFGELLLILSLA  182 (337)
T ss_pred             ehhhhcccccHH------HHHHHHHHHHHHHHhhccccccCCC--------------------cccccchHHHHHHHHHH
Confidence            999999999999      9999999999999998754433222                    34456689999999999


Q ss_pred             HHHHHHHHHHHHhhcCC-CchhHHHHHHHHHHHHHHHHHHHhcCC--CcccccccchhhHHHHHHHHHHHHHHHHHHHHH
Q 017528          200 SFGLWLVLQGFVMKSYP-SKLLFTTLQCFLSSIQSFAIAIALERD--PHEWVLGWNVRLLAVAYCGIIVTALTYYLQAWV  276 (370)
Q Consensus       200 ~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~a  276 (370)
                      .-++....+.|..+.+. ....++.+..+.+.+.+....++.+.-  .-.+....|..|+.+..+++ ++.+++++.+.-
T Consensus       183 mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai-~s~LGQ~fIF~t  261 (337)
T KOG1580|consen  183 MDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAI-ASCLGQWFIFKT  261 (337)
T ss_pred             hcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHH-HHHhhhHHHHHH
Confidence            99998888888776543 335788888888888877766554432  22233345667888888887 688999999999


Q ss_pred             HhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHh
Q 017528          277 IEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVL  327 (370)
Q Consensus       277 ~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~  327 (370)
                      +...+|..-|++....-+|+++.++++++.+++.+||+|.++++.+...=.
T Consensus       262 v~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~  312 (337)
T KOG1580|consen  262 VEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADV  312 (337)
T ss_pred             HHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHh
Confidence            999999999999999999999999999999999999999999999987743

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.66  E-value=6.7e-17  Score=137.48  Aligned_cols=266  Identities=18%  Similarity=0.193  Sum_probs=200.2

Q ss_pred             HHHHHHHHHHhCCCC-hHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChh
Q 017528           25 GMFLLSKAAFNGGMN-NFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSAT  103 (370)
Q Consensus        25 ~~~~~~k~~~~~~~~-~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~  103 (370)
                      .....+....+.|++ |...+|+.+..-+++-.+++.+|.  +..   ...|...+++++.- +-++++...|.||++..
T Consensus        32 ~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~--~~~---~~~~~hYilla~~D-VEaNy~vV~AyQyTsmt  105 (336)
T KOG2766|consen   32 STAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRR--KYI---KAKWRHYILLAFVD-VEANYFVVKAYQYTSMT  105 (336)
T ss_pred             cchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhh--HHH---HHHHHHhhheeEEe-ecccEEEeeehhhcchH
Confidence            333333333333444 889999999999999999988743  222   23455577778777 66777888999999999


Q ss_pred             hHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCccccccccccccCCCCcccccccCC
Q 017528          104 LAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNSQQIHGHVSS  183 (370)
Q Consensus       104 ~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (370)
                      .++.+-+-..+.+.+++|+++|.|.+..      ++.|+++|+.|++.+.+. +-..+    ++           .   +
T Consensus       106 Si~lLDcwaip~v~~lsw~fLktrYrlm------ki~gV~iCi~GvvmvV~s-DV~ag----d~-----------a---g  160 (336)
T KOG2766|consen  106 SIMLLDCWAIPCVLVLSWFFLKTRYRLM------KISGVVICIVGVVMVVFS-DVHAG----DR-----------A---G  160 (336)
T ss_pred             HHHHHHHhhhHHHHHHHHHHHHHHHhhh------eeeeEEeEecceEEEEEe-eeccc----cc-----------c---C
Confidence            9999999999999999999999999999      999999999999998863 21111    11           1   4


Q ss_pred             CcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhhHHHHHH-H
Q 017528          184 GKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHEWVLGWNVRLLAVAYC-G  262 (370)
Q Consensus       184 ~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g  262 (370)
                      ..+..+|+++.++++-+||+.++..+.+.++.+ ....+....+++++++.+- ++.+.... ....+  ++....++ .
T Consensus       161 gsnp~~GD~lvi~GATlYaVSNv~EEflvkn~d-~~elm~~lgLfGaIIsaIQ-~i~~~~~~-~tl~w--~~~i~~yl~f  235 (336)
T KOG2766|consen  161 GSNPVKGDFLVIAGATLYAVSNVSEEFLVKNAD-RVELMGFLGLFGAIISAIQ-FIFERHHV-STLHW--DSAIFLYLRF  235 (336)
T ss_pred             CCCCccCcEEEEecceeeeeccccHHHHHhcCc-HHHHHHHHHHHHHHHHHHH-Hhhhccce-eeEee--hHHHHHHHHH
Confidence            567789999999999999999999999999875 5899999999999999887 44444211 11111  12222222 2


Q ss_pred             HHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHhc
Q 017528          263 IIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLW  328 (370)
Q Consensus       263 ~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~  328 (370)
                      .++...-|.+.-..+|..+++...+-..++-.++.+.  ..||-+.+|...+..+.+..|.+++..
T Consensus       236 ~L~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~  299 (336)
T KOG2766|consen  236 ALTMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYST  299 (336)
T ss_pred             HHHHHHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeec
Confidence            2334444455555678888888888888888888888  568888999999999999999999843

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.61  E-value=6.5e-14  Score=124.24  Aligned_cols=230  Identities=16%  Similarity=0.148  Sum_probs=168.8

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhh
Q 017528           71 SFLTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAA  150 (370)
Q Consensus        71 ~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~  150 (370)
                      ++++..++.+-+++. .+.+.+.+.++++.+++..+++.++..++|++++++++|+|++.+      ||.++.+.++|++
T Consensus        13 ~~~~~~~~~vPA~lY-~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~------qW~aL~lL~~Gv~   85 (244)
T PF04142_consen   13 SPKDTLKLAVPALLY-AIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRR------QWLALFLLVAGVV   85 (244)
T ss_pred             hHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchh------hHHHHHHHHHHHh
Confidence            367777788888776 889999999999999999999999999999999999999999999      9999999999999


Q ss_pred             hhhhccCCccccccccccccCCCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCch-hHHHHHHHHH
Q 017528          151 TLAFYNGPQLRLLCHHHIFGHHNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKL-LFTTLQCFLS  229 (370)
Q Consensus       151 li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~-~~~~~~~~~~  229 (370)
                      ++...+....+.++..  .       .+.+. ...+...|.++.++++++.++..++.+|..|+.+.+. .........+
T Consensus        86 lv~~~~~~~~~~~~~~--~-------~~~~~-~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~g  155 (244)
T PF04142_consen   86 LVQLSSSQSSDNSSSS--S-------VHHDA-SNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFG  155 (244)
T ss_pred             eeecCCcccccccccc--c-------ccccc-ccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHH
Confidence            9875322211100000  0       00000 2345678999999999999999999999999875333 3344444555


Q ss_pred             HHHHHHHHHHhcCC-CcccccccchhhHHHHHHHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccc
Q 017528          230 SIQSFAIAIALERD-PHEWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEII  308 (370)
Q Consensus       230 ~i~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~  308 (370)
                      .+..++.....+.+ ..+...  ...+-...+.-++...++-.+....+|+.+...=+.....+.+++.++++++|+.++
T Consensus       156 i~~~~~~~~~~~~~~~~~~g~--f~G~~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~  233 (244)
T PF04142_consen  156 ILFNLLALLLSDGSAISESGF--FHGYSWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPP  233 (244)
T ss_pred             HHHHHHHHhcccccccccCCc--hhhcchHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence            55555443333221 111111  122222333445566777777888999999999999999999999999999999999


Q ss_pred             hhhhHHHHHHH
Q 017528          309 TLGRILGGLLL  319 (370)
Q Consensus       309 ~~~~~iG~~li  319 (370)
                      +....+|++++
T Consensus       234 s~~f~lg~~~V  244 (244)
T PF04142_consen  234 SLSFLLGAALV  244 (244)
T ss_pred             chHHhhheecC
Confidence            99999998753

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.58  E-value=1.7e-12  Score=115.39  Aligned_cols=286  Identities=14%  Similarity=0.077  Sum_probs=217.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhCCCC-hHHHHH--HHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHH
Q 017528           11 RPYLTVILIQAIYAGMFLLSKAAFNGGMN-NFVFIF--YRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGIT   87 (370)
Q Consensus        11 ~~~l~~l~~~~~~~~~~~~~k~~~~~~~~-~~~~~~--~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   87 (370)
                      .+++..+.-++.=-...++.|.+... ++ |..+..  .+.+.+.+.+...-..+ --+.++++++..+..+...++. .
T Consensus        12 ~~l~sa~~Y~~sS~lm~vvNK~vls~-y~f~~~l~l~~~Q~l~s~~~v~~lk~~~-lv~~~~l~~~~~kk~~P~~~lf-~   88 (314)
T KOG1444|consen   12 SPLLSALFYCLSSILMTVVNKIVLSS-YNFPMGLLLMLLQSLASVLVVLVLKRLG-LVNFRPLDLRTAKKWFPVSLLF-V   88 (314)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhc-CCCcHHHHHHHHHHHHHHHHHHHHHHhc-eeecCCcChHHHHHHccHHHHH-H
Confidence            34666666666666677888998876 43 444444  78877777666543331 1234567788888888888776 7


Q ss_pred             HHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCccccccccc
Q 017528           88 FSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHH  167 (370)
Q Consensus        88 ~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~~~  167 (370)
                      ++...-..+++|.+.....++.+..|+++++....++|.+.+.+      .|.++....+|.......+           
T Consensus        89 ~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~------v~~Sv~~m~~~s~~~~~~d-----------  151 (314)
T KOG1444|consen   89 GMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNK------VWASVFAMIIGSVAAAFTD-----------  151 (314)
T ss_pred             HHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhh------HHHHHHHHHHHHHhhcccc-----------
Confidence            77778889999999999999999999999999999987555555      9999999999888866531           


Q ss_pred             cccCCCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-CchhHHHHHHHHHHHHHHHHHHHhcCCCcc
Q 017528          168 IFGHHNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYP-SKLLFTTLQCFLSSIQSFAIAIALERDPHE  246 (370)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  246 (370)
                                      ......|..+++...++.+.+.+..|+..+..+ +.....++..+.+........+++++.. .
T Consensus       152 ----------------~sf~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~-~  214 (314)
T KOG1444|consen  152 ----------------LSFNLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELD-A  214 (314)
T ss_pred             ----------------ceecchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchH-H
Confidence                            122235899999999999999999998776544 4578889999999988888776665421 1


Q ss_pred             cc-----cccchhhHHHHHHHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHH
Q 017528          247 WV-----LGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIG  321 (370)
Q Consensus       247 ~~-----~~~~~~~~~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~  321 (370)
                      ..     ......+..+++.++++.++.|. -.++.+..++...++++..+...+.+-..++.+++.++...+|..+-+.
T Consensus       215 l~~~~~~~~~~~~~~~~~lScv~gf~isy~-s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~  293 (314)
T KOG1444|consen  215 LSLNFDNWSDSSVLVVMLLSCVMGFGISYT-SFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFF  293 (314)
T ss_pred             HHhhcccccchhHHHHHHHHHHHHHHHHHH-HHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhh
Confidence            11     11233456667767665555554 5699999999999999988888888888888999999999999999999


Q ss_pred             HHHHHhcCcchhh
Q 017528          322 GLYAVLWGKSKEQ  334 (370)
Q Consensus       322 g~~l~~~~~~~~~  334 (370)
                      |-+++++.+.+++
T Consensus       294 ggv~Y~~~~~~~k  306 (314)
T KOG1444|consen  294 GGVLYSYATFRKK  306 (314)
T ss_pred             hhhHHhhhhhhhc
Confidence            9999988765543

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.55  E-value=2.3e-12  Score=113.01  Aligned_cols=269  Identities=14%  Similarity=0.162  Sum_probs=194.3

Q ss_pred             HHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccC---CCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHh
Q 017528           23 YAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKA---PPLSFLTFC-KIFFLSLIGITFSLDLYGIALI   98 (370)
Q Consensus        23 ~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~---~~~~~~~~~-~~~~~g~~~~~~~~~~~~~al~   98 (370)
                      .+..+...+.-.+. -=|..++.++.++-.++........+++..   ...+|++.. +...+++.. +....+-+++++
T Consensus        29 i~Ltf~~~~~~~~f-~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalat-a~DIGLSN~sl~  106 (349)
T KOG1443|consen   29 IGLTFYFKWLTKNF-HFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALAT-ALDIGLSNWSLE  106 (349)
T ss_pred             HHHHHHhhhhhcCc-CCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhh-hcccccccceee
Confidence            34444444433332 228888888888887777666554333322   245666644 455666665 888888899999


Q ss_pred             hcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCccccccccccccCCCCcccc
Q 017528           99 YTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNSQQIH  178 (370)
Q Consensus        99 ~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (370)
                      |++.+..++..+..++|+.+++.++-=||+++.      -..-++++.+|+.+..+.                       
T Consensus       107 yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~------L~l~v~lI~~Glflft~K-----------------------  157 (349)
T KOG1443|consen  107 YVTLSLYTMTKSSSILFILLFSLIFKLEKFRWA------LVLIVLLIAVGLFLFTYK-----------------------  157 (349)
T ss_pred             eeeeeeeeeccccHHHHHHHHHHHHHhHHHHHH------HHHHHHHHhhheeEEEec-----------------------
Confidence            999999999999999999999999998999987      777778888888888763                       


Q ss_pred             cccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCC----CchhHHHHHHHHHHHHHHHHHHHhcCCCc-----cccc
Q 017528          179 GHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYP----SKLLFTTLQCFLSSIQSFAIAIALERDPH-----EWVL  249 (370)
Q Consensus       179 ~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~----~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-----~~~~  249 (370)
                          +.+-...|.++..++.++.++--...+...++.+    +|....+.......+.++|..+..|+...     .++.
T Consensus       158 ----sTqf~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~  233 (349)
T KOG1443|consen  158 ----STQFNIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRF  233 (349)
T ss_pred             ----ccceeehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHh
Confidence                2233457888888888888887777776666544    78999999999999999999888887422     1222


Q ss_pred             ccchhhHHHHHHHHHHHHHHH---HHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHH
Q 017528          250 GWNVRLLAVAYCGIIVTALTY---YLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAV  326 (370)
Q Consensus       250 ~~~~~~~~l~~~g~~~~~~~~---~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~  326 (370)
                      .++...+..+..-.++...++   ..-+..+.+++....++.+...-+.+.+++..+.+|+++...|.|..+...|+.+.
T Consensus       234 ~d~~~~~rv~g~i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~  313 (349)
T KOG1443|consen  234 QDTGLILRVIGLISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH  313 (349)
T ss_pred             cCccHHHHHHHHHHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence            222112221111111222333   22345678889999999999999999999999999999999999999999999988

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.55  E-value=2.1e-13  Score=104.20  Aligned_cols=135  Identities=15%  Similarity=0.119  Sum_probs=115.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHH
Q 017528          190 GCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHEWVLGWNVRLLAVAYCGIIVTALT  269 (370)
Q Consensus       190 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~  269 (370)
                      ..++++++++.+++..++.|--.++. ||..-+..+.....+.+....+..++. +.....+++.|..++..| ++++++
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~~v-dp~~At~IRtiVi~~~l~~v~~~~g~~-~~~~~~~~k~~lflilSG-la~gls   80 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLEGV-DPDFATTIRTIVILIFLLIVLLVTGNW-QAGGEIGPKSWLFLILSG-LAGGLS   80 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccc-CccHHHHHHHHHHHHHHHHHHHhcCce-ecccccCcceehhhhHHH-HHHHHH
Confidence            47899999999999999999888876 568888888888888887766554442 222223567788888877 589999


Q ss_pred             HHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHh
Q 017528          270 YYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVL  327 (370)
Q Consensus       270 ~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~  327 (370)
                      ..+|+++++..+++++.++..++|+++.+++++++||+++..+++|+++|++|.++..
T Consensus        81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            9999999999999999999999999999999999999999999999999999988764

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.54  E-value=2.8e-14  Score=113.78  Aligned_cols=125  Identities=23%  Similarity=0.311  Sum_probs=111.6

Q ss_pred             HHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017528           21 AIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFSLDLYGIALIYT  100 (370)
Q Consensus        21 ~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~  100 (370)
                      ++||...++.|...++ .||...+++|+.++.+ ++++....+++..++.+++.+......|.++...++.+++++++++
T Consensus         1 ~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~   78 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKK-ISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYI   78 (126)
T ss_pred             ceeeeHHHHHHHHhcc-CCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhc
Confidence            4699999999999997 9999999999999998 6666555454444566788888889999887689999999999999


Q ss_pred             ChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhh
Q 017528          101 SATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLA  153 (370)
Q Consensus       101 ~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~  153 (370)
                      +++.++++.++.|+++.+++++++||+++.+      +++|+.+++.|++++.
T Consensus        79 ~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~------~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   79 SASIVSILQYLSPVFAAILGWLFLGERPSWR------QIIGIILIIIGVVLIS  125 (126)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999      9999999999998865

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.42  E-value=1.2e-11  Score=108.57  Aligned_cols=264  Identities=15%  Similarity=0.160  Sum_probs=204.3

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHhhhccchhHHHHH
Q 017528           39 NNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFF  118 (370)
Q Consensus        39 ~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~l  118 (370)
                      ++..+.+.+.+.+.++-...+..  ++.. ...++.|+.....++.. ..+..+-+.|++|.+-....+-.++--+-+++
T Consensus        50 ~~~fL~~~q~l~~~~~s~~~l~~--~k~~-~~~~apl~~y~~is~tn-~~s~~~~yeaLKyvSyPtq~LaKscKmIPVml  125 (327)
T KOG1581|consen   50 HSLFLVFCQRLVALLVSYAMLKW--WKKE-LSGVAPLYKYSLISFTN-TLSSWCGYEALKYVSYPTQTLAKSCKMIPVML  125 (327)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhc--cccc-CCCCCchhHHhHHHHHh-hcchHHHHHHHHhccchHHHHHHHhhhhHHHH
Confidence            47788888888887777554433  2222 23345577777778777 77888999999999999888888999999999


Q ss_pred             HHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCccccccccccccCCCCcccccccCCCcchHHHHHHHHHHH
Q 017528          119 LAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNSQQIHGHVSSGKTWIKGCFIMLSSN  198 (370)
Q Consensus       119 l~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~  198 (370)
                      ++.++.+.|++..      +.....++-.|+.+.+..+... +             .+.+    ...+...|..+....-
T Consensus       126 mg~Lvy~~ky~~~------eYl~~~LIs~GvsiF~l~~~s~-s-------------~~~~----g~~ns~~G~~Ll~~~L  181 (327)
T KOG1581|consen  126 MGTLVYGRKYSSF------EYLVAFLISLGVSIFSLFPNSD-S-------------SSKS----GRENSPIGILLLFGYL  181 (327)
T ss_pred             HHHHHhcCccCcH------HHHHHHHHHhheeeEEEecCCC-C-------------cccc----CCCCchHhHHHHHHHH
Confidence            9999999999999      9999999999998887643211 0             0000    3345668999999999


Q ss_pred             HHHHHHHHHHHHHhhcCC-CchhHHHHHHHHHHHHHHHHHHHhcCC-Cc--ccccccchhhHHHHHHHHHHHHHHHHHHH
Q 017528          199 TSFGLWLVLQGFVMKSYP-SKLLFTTLQCFLSSIQSFAIAIALERD-PH--EWVLGWNVRLLAVAYCGIIVTALTYYLQA  274 (370)
Q Consensus       199 ~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~--~~~~~~~~~~~~l~~~g~~~~~~~~~~~~  274 (370)
                      +.=+..+..+.++.++.+ ++..+++...+++.+...... +..+. ..  ++....+..++-++.... ++++++.+.+
T Consensus       182 ~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~l-i~qg~~~~av~F~~~hp~~~~Di~l~s~-~gavGQ~FI~  259 (327)
T KOG1581|consen  182 LFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYL-ILQGHLLPAVSFIKEHPDVAFDILLYST-CGAVGQLFIF  259 (327)
T ss_pred             HHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhh-hcCCCCchHHHHHHcChhHHHHHHHHHH-hhhhhhheeh
Confidence            999999999998888655 668889999999888887653 33332 11  222223344555555555 5789999999


Q ss_pred             HHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHhcCcch
Q 017528          275 WVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLWGKSK  332 (370)
Q Consensus       275 ~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~~  332 (370)
                      +-+++.++...+.++.+.-++++.++.+.+|.+++..|++|..+++.|+.+-...+.+
T Consensus       260 ~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~  317 (327)
T KOG1581|consen  260 YTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK  317 (327)
T ss_pred             hhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999999999999999986655444

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.42  E-value=6.8e-13  Score=105.72  Aligned_cols=125  Identities=22%  Similarity=0.326  Sum_probs=107.6

Q ss_pred             HHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHh
Q 017528          199 TSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHEWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIE  278 (370)
Q Consensus       199 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~a~~  278 (370)
                      ++||.+.+..|+..++. +|.....+++..+.+ .++...+.+...  ....+...+...++.+++++++++.+++++++
T Consensus         1 ~~~a~~~~~~k~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~   76 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKKI-SPLSITFWRFLIAGI-LLILLLILGRKP--FKNLSPRQWLWLLFLGLLGTALAYLLYFYALK   76 (126)
T ss_pred             ceeeeHHHHHHHHhccC-CHHHHHHHHHHHHHH-HHHHHHhhcccc--ccCCChhhhhhhhHhhccceehHHHHHHHHHH
Confidence            47899999999998886 579999999999998 666665555432  22234556777888888888999999999999


Q ss_pred             ccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHh
Q 017528          279 KKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVL  327 (370)
Q Consensus       279 ~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~  327 (370)
                      +.+++.++.+.+++|+++.++++++++|++++.+++|+++++.|+++..
T Consensus        77 ~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   77 YISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999998864

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.40  E-value=8.7e-12  Score=107.98  Aligned_cols=274  Identities=15%  Similarity=0.091  Sum_probs=188.4

Q ss_pred             HHHHHHHHHHHh---CCC----ChHHHHHHHHHHHHHHHHHHHhhhhcccCCC---------------CCHHHHHHHHHH
Q 017528           24 AGMFLLSKAAFN---GGM----NNFVFIFYRQAFATLFVAPISLAVEWKKAPP---------------LSFLTFCKIFFL   81 (370)
Q Consensus        24 ~~~~~~~k~~~~---~~~----~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~---------------~~~~~~~~~~~~   81 (370)
                      +.+.++.|++-+   +|-    +|+.....-++.-++++..+.+++.+...+.               +++..   .+.-
T Consensus        16 s~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~l---fl~P   92 (372)
T KOG3912|consen   16 SFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVL---FLPP   92 (372)
T ss_pred             cHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcce---ecCh
Confidence            446667776543   122    2666666666666677777777654433221               12222   2223


Q ss_pred             HHHHHHHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCccc
Q 017528           82 SLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLR  161 (370)
Q Consensus        82 g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~  161 (370)
                      .+|- ..+..+.|.++.+++++.-+.+.....+|+.+++.-+++.+++.+      +|.|+.....|++++...+  ...
T Consensus        93 al~D-i~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~------qWl~i~fv~lGlviVg~~d--~~~  163 (372)
T KOG3912|consen   93 ALCD-IAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGR------QWLGILFVSLGLVIVGSLD--VHL  163 (372)
T ss_pred             HHHH-HhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchh------hHHHHHHHHhhhheeeeee--ccc
Confidence            4444 455566779999999999999999999999999999999999999      9999999999999987531  111


Q ss_pred             cccccccccCCCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-CchhHHHHHHHHHHHHHHHHHHHh
Q 017528          162 LLCHHHIFGHHNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYP-SKLLFTTLQCFLSSIQSFAIAIAL  240 (370)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~  240 (370)
                      +         +++..      +.++...|+++.+.+-+.-|+..++-+|..++.+ +|.....|...++.++...+....
T Consensus       164 ~---------~~p~~------d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m  228 (372)
T KOG3912|consen  164 V---------TDPYT------DYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPM  228 (372)
T ss_pred             c---------cCCcc------ccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHH
Confidence            1         00000      3456789999999999999999999988887766 889999999999965444333222


Q ss_pred             cC-C-Ccccccccc---hh------------hHHHHHHHHHHHHHHHHHHHH----HHhccCceeEEeccchHHHHHHHH
Q 017528          241 ER-D-PHEWVLGWN---VR------------LLAVAYCGIIVTALTYYLQAW----VIEKKGPVFLAMSTPLALIFTTIA  299 (370)
Q Consensus       241 ~~-~-~~~~~~~~~---~~------------~~~l~~~g~~~~~~~~~~~~~----a~~~~~~~~~s~~~~~~pi~~~~~  299 (370)
                      .. + .+.++.++.   .+            ...++..|.   .++..+++.    -.|..++++-.++-.+...+-.++
T Consensus       229 ~yi~~~~sfS~~~~g~~eD~~~~~~~~~e~p~l~val~~~---~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~  305 (372)
T KOG3912|consen  229 YYIPSGDSFSCNPRGVLEDWGDAFAALQESPSLAVALIGF---TVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVF  305 (372)
T ss_pred             hheecCCcCcCCCCcchhhHHHHHHHhcCCchhHHHHhhh---hhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHh
Confidence            11 0 111111110   01            122333333   333333333    245667777788889999999999


Q ss_pred             HHHHhcccchhhhHHHHHHHHHHHHHHh
Q 017528          300 SVFLLCEIITLGRILGGLLLIGGLYAVL  327 (370)
Q Consensus       300 ~~~~~~e~~~~~~~iG~~li~~g~~l~~  327 (370)
                      +.....|.+...|+.|.++.+.|+++|+
T Consensus       306 si~m~~E~f~llqilGFliLi~Gi~lY~  333 (372)
T KOG3912|consen  306 SIAMGWEYFHLLQILGFLILIMGIILYN  333 (372)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999986

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.38  E-value=1.5e-12  Score=112.33  Aligned_cols=268  Identities=14%  Similarity=0.088  Sum_probs=195.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhhhccc----CC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHhhhccchh
Q 017528           40 NFVFIFYRQAFATLFVAPISLAVEWKK----AP--PLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLP  113 (370)
Q Consensus        40 ~~~~~~~r~~~~~l~l~~~~~~~~~~~----~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p  113 (370)
                      |...++.+.+....+...+.....+-.    .+  +++.+..+...-+.+.. .++..+-+++++|.+++...+-.++..
T Consensus        61 plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVf-i~mI~fnnlcL~yVgVaFYyvgRsLtt  139 (347)
T KOG1442|consen   61 PLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVF-ILMISFNNLCLKYVGVAFYYVGRSLTT  139 (347)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhhee-eeehhccceehhhcceEEEEeccchhh
Confidence            788888888888777666554422221    12  23444445555455443 444445579999999999999999999


Q ss_pred             HHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCccccccccccccCCCCcccccccCCCcchHHHHHH
Q 017528          114 AITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNSQQIHGHVSSGKTWIKGCFI  193 (370)
Q Consensus       114 i~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~  193 (370)
                      +|+.+++++++|+|-+..      -..+..+++.|-.+=..++|.                        .+.-...|.++
T Consensus       140 vFtVlLtyvllkqkTs~~------~~~~C~lIi~GF~lGvdqE~~------------------------~~~ls~~Gvif  189 (347)
T KOG1442|consen  140 VFTVLLTYVLLKQKTSFF------ALGCCLLIILGFGLGVDQEGS------------------------TGTLSWIGVIF  189 (347)
T ss_pred             hHHHHhHHhhcccccccc------cceeehhheehheeccccccc------------------------cCccchhhhHH
Confidence            999999999999999888      777777777776553321110                        22334589999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCC-CchhHHHHHHHHHHHHHHHHHHHhcCCCcccc--cc-cchhhHHHHHHHHHHHHHH
Q 017528          194 MLSSNTSFGLWLVLQGFVMKSYP-SKLLFTTLQCFLSSIQSFAIAIALERDPHEWV--LG-WNVRLLAVAYCGIIVTALT  269 (370)
Q Consensus       194 ~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~~-~~~~~~~l~~~g~~~~~~~  269 (370)
                      ...+.++-|+..+..|+.....+ .-+.++++....+.++.+|...+.+.-...+.  .. ....|..+...|+++..++
T Consensus       190 GVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~mg  269 (347)
T KOG1442|consen  190 GVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAMG  269 (347)
T ss_pred             HHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHhh
Confidence            99999999999999997765544 33578899999999999998877665222222  11 2233555555565544444


Q ss_pred             HHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHhcCcchhhhhccc
Q 017528          270 YYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLWGKSKEQKMVDK  339 (370)
Q Consensus       270 ~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~~~~~~~~~  339 (370)
                      |. ..+=+|.++|.+-.+-....-....+++..+.+|.-+..-|.|-.+++.|...+++.|.++.+++.+
T Consensus       270 yv-Tg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~~~~  338 (347)
T KOG1442|consen  270 YV-TGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRKASA  338 (347)
T ss_pred             he-eeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHhhcc
Confidence            43 4456889999999999999999999999999999999999999999999999999987776655544

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=99.32  E-value=9.4e-10  Score=97.42  Aligned_cols=252  Identities=15%  Similarity=0.098  Sum_probs=176.6

Q ss_pred             CChHHHHHHHHHHHHHHHHHHHhhhhcccCCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHhhhc-cchhH
Q 017528           38 MNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLS--FLTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAATT-NCLPA  114 (370)
Q Consensus        38 ~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~pi  114 (370)
                      -+|.+..+--...+.++-+...++ .+   +..+  .+.+...++.|++. ..++...+.|+++.+.+.+.++. ..+-+
T Consensus        10 G~~~~Q~lG~t~Gali~alv~~~~-~~---p~~~~~~~~~~~~~lsG~~W-~iGq~~qf~s~~~~GVS~tmPiStg~QLv   84 (269)
T PF06800_consen   10 GKPANQILGTTIGALIFALVVFLF-RQ---PAFSMSGTSFIVAFLSGAFW-AIGQIGQFKSFKKIGVSKTMPISTGLQLV   84 (269)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHH-hC---CCcchHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcceeeeccchhHHHH
Confidence            445555554444444444444443 22   2333  48899999999998 99999999999999999999999 88888


Q ss_pred             HHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCccccccccccccCCCCcccccccCCCcchHHHHHHH
Q 017528          115 ITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNSQQIHGHVSSGKTWIKGCFIM  194 (370)
Q Consensus       115 ~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~  194 (370)
                      .+.+++.+++||--+..++  ..-.+++++.++|+++.+..+++....                   +++.+...|....
T Consensus        85 g~sl~gv~~fgEW~~~~~~--~~G~~Al~liiiGv~lts~~~~~~~~~-------------------~~~~~~~kgi~~L  143 (269)
T PF06800_consen   85 GTSLIGVLFFGEWTTTTQK--IIGFLALVLIIIGVILTSYQDKKSDKS-------------------SSKSNMKKGILAL  143 (269)
T ss_pred             HHHHHHHhhcCCCCCcchH--HHHHHHHHHHHHHHHHhcccccccccc-------------------ccccchhhHHHHH
Confidence            8999999999998776611  113447888899998887643221100                   0345667899999


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHHHHHHH
Q 017528          195 LSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHEWVLGWNVRLLAVAYCGIIVTALTYYLQA  274 (370)
Q Consensus       195 l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~  274 (370)
                      +++.+.|..|.+..|..  +. ++.....-+.....+....+..+.+.+   .  .....|.. +..|+ .-.++..++.
T Consensus       144 l~stigy~~Y~~~~~~~--~~-~~~~~~lPqaiGm~i~a~i~~~~~~~~---~--~~k~~~~n-il~G~-~w~ignl~~~  213 (269)
T PF06800_consen  144 LISTIGYWIYSVIPKAF--HV-SGWSAFLPQAIGMLIGAFIFNLFSKKP---F--FEKKSWKN-ILTGL-IWGIGNLFYL  213 (269)
T ss_pred             HHHHHHHHHHHHHHHhc--CC-ChhHhHHHHHHHHHHHHHHHhhccccc---c--cccchHHh-hHHHH-HHHHHHHHHH
Confidence            99999999999997663  22 456666666554444444443332111   1  12223333 33344 4678888899


Q ss_pred             HHHhccCceeEEeccchHHHHHHHHHHHHhcccchhh----hHHHHHHHHHHHHH
Q 017528          275 WVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLG----RILGGLLLIGGLYA  325 (370)
Q Consensus       275 ~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~----~~iG~~li~~g~~l  325 (370)
                      .+.++.+.+..=.+.-+.++++.+.+.+++||+=+.+    ..+|+++++.|.++
T Consensus       214 is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  214 ISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL  268 (269)
T ss_pred             HhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence            9999999999999999999999999999999997755    44688888887664

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.31  E-value=6.5e-11  Score=106.91  Aligned_cols=133  Identities=19%  Similarity=0.234  Sum_probs=114.1

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHhCCCC--hHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHH
Q 017528            9 KQRPYLTVILIQAIYAGMFLLSKAAFNGGMN--NFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGI   86 (370)
Q Consensus         9 ~~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   86 (370)
                      ..+|.++.+++++.|+...+..|...++ .+  +.....+++.++.+++.++.+..++.  +..+++.+...+..++++.
T Consensus       126 ~~~G~~~~l~a~~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  202 (260)
T TIGR00950       126 NPAGLLLGLGSGISFALGTVLYKRLVKK-EGPELLQFTGWVLLLGALLLLPFAWFLGPN--PQALSLQWGALLYLGLIGT  202 (260)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhHHhhc-CCchHHHHHHHHHHHHHHHHHHHHHhcCCC--CCcchHHHHHHHHHHHHHH
Confidence            4579999999999999999999998875 66  44555578999998888887653322  2335677777888888887


Q ss_pred             HHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhh
Q 017528           87 TFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAA  150 (370)
Q Consensus        87 ~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~  150 (370)
                      ..++.+|++++++.+++.++.+.++.|+++.+++++++||+++..      ++.|+.+.+.|+.
T Consensus       203 ~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~------~~~G~~li~~g~~  260 (260)
T TIGR00950       203 ALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLP------QLIGGALIIAAVL  260 (260)
T ss_pred             HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHhcC
Confidence            899999999999999999999999999999999999999999999      9999999999863

>PRK13499 rhamnose-proton symporter; Provisional

Probab=99.29  E-value=4.9e-09  Score=96.60  Aligned_cols=302  Identities=14%  Similarity=0.092  Sum_probs=184.7

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHH-HHHHHHHHHH---HHHhhhh-cccCCCCCHHHHHHHHHHHH
Q 017528            9 KQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFY-RQAFATLFVA---PISLAVE-WKKAPPLSFLTFCKIFFLSL   83 (370)
Q Consensus         9 ~~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~-r~~~~~l~l~---~~~~~~~-~~~~~~~~~~~~~~~~~~g~   83 (370)
                      ...|++..+++.++||+.++..|. .+. .+-..+ .. -.+++.++.-   .....+. .......+.+.+...++.|+
T Consensus         5 ~~~G~~~~~i~~~~~GS~~~p~K~-~k~-w~wE~~-W~v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~G~   81 (345)
T PRK13499          5 IILGIIWHLIGGASSGSFYAPFKK-VKK-WSWETM-WSVGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLFGA   81 (345)
T ss_pred             hHHHHHHHHHHHHHhhcccccccc-cCC-CchhHH-HHHHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHHHH
Confidence            567999999999999999999998 332 332211 11 1111111111   1111100 11123356788999999999


Q ss_pred             HHHHHHHHHHHHHHhhcChhhHhhhc-cchhHHHHHHHHHHhhccccc-cccCccchhhhHHHHHhhhhhhhhccCCccc
Q 017528           84 IGITFSLDLYGIALIYTSATLAAATT-NCLPAITFFLAVLLRMEVLKL-KTVPGVAKLVGILICIGGAATLAFYNGPQLR  161 (370)
Q Consensus        84 ~~~~~~~~~~~~al~~~~~~~~~~i~-~~~pi~~~ll~~l~~~e~~~~-~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~  161 (370)
                      +. ..++..++.++++.+.+.+.++. .+.-+...++..++++|--+. .++-...-.+|++++++|+++.......+.+
T Consensus        82 ~W-~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~~k~~  160 (345)
T PRK13499         82 LW-GIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQLKER  160 (345)
T ss_pred             HH-HhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhhhccc
Confidence            98 99999999999999999999888 899999999999999864311 1222233788899999999998862211111


Q ss_pred             cccccccccCCCCcccccccCCCcchHHHHHHHHHHHHHHHHHH-------HHHHHHhhcCCCchhHHHHHHH---HHHH
Q 017528          162 LLCHHHIFGHHNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWL-------VLQGFVMKSYPSKLLFTTLQCF---LSSI  231 (370)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~-------v~~~~~~~~~~~~~~~~~~~~~---~~~i  231 (370)
                      . ++             .+++++.+..+|..+++++++.++.|.       ...+...+...++......+..   .+.+
T Consensus       161 ~-~~-------------~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~  226 (345)
T PRK13499        161 K-MG-------------IKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGA  226 (345)
T ss_pred             c-cc-------------cccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHH
Confidence            0 00             000045677899999999999999999       4333321221233433333333   3333


Q ss_pred             HHHH-HHHHh--c-CCCccc-ccccc-----hhhHHHHHHHHHHHHHHHHHHHHHHhccCceeEEe---cc-chHHHHHH
Q 017528          232 QSFA-IAIAL--E-RDPHEW-VLGWN-----VRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAM---ST-PLALIFTT  297 (370)
Q Consensus       232 ~~~~-~~~~~--~-~~~~~~-~~~~~-----~~~~~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~---~~-~~~pi~~~  297 (370)
                      +.-. ...+.  . .+.... ....+     .....-+..| +.=.+++.++..+-.+.+......   +. .+..+++.
T Consensus       227 ~~n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G-~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~Viist  305 (345)
T PRK13499        227 ITNLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAG-VMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGN  305 (345)
T ss_pred             HHHHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHH
Confidence            3332 22211  1 111101 11110     1111112323 345667777777777776554443   43 77779999


Q ss_pred             HHHHHHhcccch------hhhHHHHHHHHHHHHHHhcCc
Q 017528          298 IASVFLLCEIIT------LGRILGGLLLIGGLYAVLWGK  330 (370)
Q Consensus       298 ~~~~~~~~e~~~------~~~~iG~~li~~g~~l~~~~~  330 (370)
                      +.+. ++||.=+      ...++|++++++|.++....+
T Consensus       306 lwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~~  343 (345)
T PRK13499        306 LWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGLGN  343 (345)
T ss_pred             Hhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhhcc
Confidence            9999 4888755      667889999999999876543

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.27  E-value=7.7e-11  Score=98.88  Aligned_cols=276  Identities=14%  Similarity=0.125  Sum_probs=190.2

Q ss_pred             HHHHHHHHhC-CCC-hHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhh
Q 017528           27 FLLSKAAFNG-GMN-NFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSATL  104 (370)
Q Consensus        27 ~~~~k~~~~~-~~~-~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~  104 (370)
                      .+-.|...+. |++ -+.+.+++.+.+.+-++.+-..+.-+ .+..+.|.|...-.   +. +...+.--.+++|.+...
T Consensus        22 TltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~-fR~t~aK~WfpiSf---LL-v~MIyt~SKsLqyL~vpi   96 (309)
T COG5070          22 TLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVE-FRLTKAKKWFPISF---LL-VVMIYTSSKSLQYLAVPI   96 (309)
T ss_pred             HHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhh-eehhhhhhhcCHHH---HH-HHHHHhcccceeeeeeeH
Confidence            3445555543 343 34556667666665555443322111 11222333433322   22 333334458999999999


Q ss_pred             HhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCccccccccccccCCCCcccccccCCC
Q 017528          105 AAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNSQQIHGHVSSG  184 (370)
Q Consensus       105 ~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (370)
                      .+++.++..+.++....+++|.|++-.      +....++.+..-++-.+.+ .+...      +             ..
T Consensus        97 YTiFKNltII~iAygEvl~Fgg~vtsl------~l~SFilMvlSS~va~w~D-~q~~~------~-------------~~  150 (309)
T COG5070          97 YTIFKNLTIILIAYGEVLFFGGRVTSL------ELLSFILMVLSSVVATWGD-QQASA------F-------------KA  150 (309)
T ss_pred             HHHhccceeehhHhhHHHHhcCccchh------hHHHHHHHHHHHHHhccch-hhHHH------H-------------Hh
Confidence            999999999999999999999888888      8888877777766655421 11000      0             22


Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-CchhHHHHHHHHHHHHHHHHHHHhcCC-Ccccccc-cchhhHHHHHH
Q 017528          185 KTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYP-SKLLFTTLQCFLSSIQSFAIAIALERD-PHEWVLG-WNVRLLAVAYC  261 (370)
Q Consensus       185 ~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~-~~~~~~~l~~~  261 (370)
                      ...+.|.+++....+..+++....|+..+-.+ .....+++....+..+++.+.++.|+. +.....+ +.....+....
T Consensus       151 ~~lN~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~IS  230 (309)
T COG5070         151 QILNPGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFIS  230 (309)
T ss_pred             cccCCceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHH
Confidence            34567999999999999999999887655322 227889999999999988888877653 2211111 22334566666


Q ss_pred             HHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHhcCcchhh
Q 017528          262 GIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLWGKSKEQ  334 (370)
Q Consensus       262 g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~~~~  334 (370)
                      |+++-++ -++-.|+++.++.+..++++.++-.-..+.|.++|+|+.+...+..+.+-..+..++...+.+++
T Consensus       231 gl~svgi-Sy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~  302 (309)
T COG5070         231 GLCSVGI-SYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQ  302 (309)
T ss_pred             HHHHhhh-hhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            7654444 45678999999999999999999999999999999999999999999998888888876655443

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=99.24  E-value=3.4e-11  Score=94.27  Aligned_cols=104  Identities=25%  Similarity=0.313  Sum_probs=87.2

Q ss_pred             HHHHHHHHHHHHHHHhhhhccc--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHH
Q 017528           45 FYRQAFATLFVAPISLAVEWKK--APPLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVL  122 (370)
Q Consensus        45 ~~r~~~~~l~l~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l  122 (370)
                      .+|+.++.+++..+...+++..  .+..+++.+.+....|+++...++.++++|+++.+ +.+.++.++.|+++.+++++
T Consensus         2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~   80 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL   80 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence            4789999999888877743321  22334455667777788886689999999999999 58889999999999999999


Q ss_pred             HhhccccccccCccchhhhHHHHHhhhhhhhhc
Q 017528          123 LRMEVLKLKTVPGVAKLVGILICIGGAATLAFY  155 (370)
Q Consensus       123 ~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~  155 (370)
                      ++|||++++      ++.+++++++|++++...
T Consensus        81 ~~~er~~~~------~~~a~~l~~~Gv~li~~~  107 (113)
T PF13536_consen   81 FFKERLSPR------RWLAILLILIGVILIAWS  107 (113)
T ss_pred             HhcCCCCHH------HHHHHHHHHHHHHHHhhh
Confidence            999999999      999999999999999874

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=99.23  E-value=2.2e-10  Score=99.23  Aligned_cols=264  Identities=10%  Similarity=0.029  Sum_probs=171.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHh-hhccchhHHHHHH
Q 017528           41 FVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSATLAA-ATTNCLPAITFFL  119 (370)
Q Consensus        41 ~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~-~i~~~~pi~~~ll  119 (370)
                      ..++|.++++-+.--++..- +-...+++.+.|++......-    ...+.+-++++++--+--.. ++.+-.++.++.+
T Consensus        34 NLITFaqFlFia~eGlif~s-kf~~~k~kiplk~Y~i~V~mF----F~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~  108 (330)
T KOG1583|consen   34 NLITFAQFLFIATEGLIFTS-KFFTVKPKIPLKDYAITVAMF----FIVNVTNNYALKFNIPMPLHIIFRSGSLLANMIL  108 (330)
T ss_pred             eehHHHHHHHHHHhceeeec-cccccCCCCchhhhheehhee----eeeeeeccceeeecccceEEEEEecCcHHHHHHH
Confidence            55666666655544333321 011123555666665443332    34455557899885444444 4558899999999


Q ss_pred             HHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCccccccccccccCCCCcccccccCCCcchHHHHHHHHHHHH
Q 017528          120 AVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNSQQIHGHVSSGKTWIKGCFIMLSSNT  199 (370)
Q Consensus       120 ~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~  199 (370)
                      ++++.|.|.+.+      |..++++..+|+++....+.++...  +.+..++.      +.++....+..|+.+...+-+
T Consensus       109 g~il~~k~Ys~~------Qy~Sv~~iTiGiiIcTl~s~~d~~~--~~~~l~~~------~~~~~~~~w~iGi~lL~~al~  174 (330)
T KOG1583|consen  109 GWILLGKRYSLR------QYSSVLMITIGIIICTLFSSKDGRS--KLSGLDSG------SAQSDFFWWLIGIALLVFALL  174 (330)
T ss_pred             HHHhccceeehh------hhhhHHhhhhhheeEEeecCcchhh--hhcccccC------cccccchHHHHHHHHHHHHHH
Confidence            999999999999      9999999999999988765443322  11111000      011144567889999999999


Q ss_pred             HHHHHHHHHHHHhhcCC-CchhHHHHHHHHHHHHHHHHHHHhcCC-Ccc--------------cccccchhhHHHHHHHH
Q 017528          200 SFGLWLVLQGFVMKSYP-SKLLFTTLQCFLSSIQSFAIAIALERD-PHE--------------WVLGWNVRLLAVAYCGI  263 (370)
Q Consensus       200 ~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~--------------~~~~~~~~~~~l~~~g~  263 (370)
                      ..|.-.++++..-++++ ++-+..++.-..+..    ..++..++ ..+              ....-|..|+.++. .+
T Consensus       175 ~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP----~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~-n~  249 (330)
T KOG1583|consen  175 LSAYMGIYQETTYQKYGKHWKEALFYTHFLSLP----LFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLF-NV  249 (330)
T ss_pred             HHHHHHHHHHHHHHHhcCChHHHHHHHHHhccc----hHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHH-HH
Confidence            99998888887766655 667777776665544    33333322 001              11112333443333 22


Q ss_pred             HHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHhc
Q 017528          264 IVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLW  328 (370)
Q Consensus       264 ~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~  328 (370)
                      +..-.+.-..+..-...++.+++++..+.-.++.+++.+.|+.++++..|+|..++..|..++..
T Consensus       250 L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~  314 (330)
T KOG1583|consen  250 LTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFAN  314 (330)
T ss_pred             HHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence            23333333334444566788999999999999999999999999999999999999999998763

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=99.20  E-value=2e-10  Score=94.64  Aligned_cols=209  Identities=16%  Similarity=0.103  Sum_probs=154.0

Q ss_pred             HHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCcccccccc
Q 017528           87 TFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHH  166 (370)
Q Consensus        87 ~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~~  166 (370)
                      .+.++.|..|++..+++.++.+..+...|+.+++++++|+|+...      ++++.++++.|++++.+.++         
T Consensus        64 t~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~------kIlaailAI~GiVmiay~DN---------  128 (290)
T KOG4314|consen   64 TGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGF------KILAAILAIGGIVMIAYADN---------  128 (290)
T ss_pred             ecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhh------hHHHHHHHhCcEEEEEeccc---------
Confidence            677889999999999999999999999999999999999999999      99999999999999986432         


Q ss_pred             ccccCCCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHH----HHHHHHHHHhcC
Q 017528          167 HIFGHHNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSS----IQSFAIAIALER  242 (370)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~----i~~~~~~~~~~~  242 (370)
                                      .....+.|+.++..+++..|+|-+.-|+.....+- -....++...+.    +...|.....-.
T Consensus       129 ----------------~~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~-Gdaa~FmS~LGF~NL~~~~~~~lIL~~T  191 (290)
T KOG4314|consen  129 ----------------EHADEIIGIACAVGSAFMAALYKVLFKMFIGNANF-GDAAHFMSCLGFFNLCFISFPALILAFT  191 (290)
T ss_pred             ----------------hhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcc-hhHHHHHHHHHHHHHHHHhhhHHHHHHh
Confidence                            23345689999999999999999999998766431 122222222222    222222212112


Q ss_pred             CCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHH
Q 017528          243 DPHEWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGG  322 (370)
Q Consensus       243 ~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g  322 (370)
                      ..++|.......|..+...+.+..+ -..+.+.++....|...|+-......-....+.++-+-..+.....|.+++++|
T Consensus       192 ~VE~~qsFA~~PWG~l~G~A~L~lA-FN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~  270 (290)
T KOG4314|consen  192 GVEHLQSFAAAPWGCLCGAAGLSLA-FNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIG  270 (290)
T ss_pred             chHHHHHHhhCCchhhhhHHHHHHH-HhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            2233322222335555555554332 234567888899999999988888888889998776777889999999999999


Q ss_pred             HHHHhc
Q 017528          323 LYAVLW  328 (370)
Q Consensus       323 ~~l~~~  328 (370)
                      .++...
T Consensus       271 FiLiii  276 (290)
T KOG4314|consen  271 FILIII  276 (290)
T ss_pred             HHheec
Confidence            988754

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=99.18  E-value=2.7e-09  Score=97.61  Aligned_cols=273  Identities=15%  Similarity=0.142  Sum_probs=154.9

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccCCCCC-HHH-HHHHHHHHHHH
Q 017528            8 DKQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLS-FLT-FCKIFFLSLIG   85 (370)
Q Consensus         8 ~~~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~-~~~-~~~~~~~g~~~   85 (370)
                      +...|.+.++.++++.+....+.|....+ .+.                       ...+.+.+ ++. ....++.|++.
T Consensus         4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r-~~~-----------------------~~~~~~~~~~~~l~~~~W~~G~~~   59 (300)
T PF05653_consen    4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLR-LPR-----------------------GSLRAGSGGRSYLRRPLWWIGLLL   59 (300)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhc-----------------------ccccccchhhHHHhhHHHHHHHHH
Confidence            35679999999999999999999987554 110                       00001000 111 12334455555


Q ss_pred             HHHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCccccccc
Q 017528           86 ITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCH  165 (370)
Q Consensus        86 ~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~  165 (370)
                      ..++..+-+.|+.+.|.+.++++..+.-++.++++..++|||++.+      ++.|+.+++.|..++... +++.+...+
T Consensus        60 ~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~------~~~G~~l~i~G~~liv~~-~~~~~~~~t  132 (300)
T PF05653_consen   60 MVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRR------DIVGCALIILGSVLIVIF-APKEEPIHT  132 (300)
T ss_pred             HhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHh------HHhhHHHHHhhheeeEEe-CCCCCCcCC
Confidence            5667777789999999999999999999999999999999999999      999999999999877653 332211111


Q ss_pred             cccccCCCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHH-------HHHHHHH
Q 017528          166 HHIFGHHNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSI-------QSFAIAI  238 (370)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i-------~~~~~~~  238 (370)
                      .++..+.-         .+... ... ..+...++..+.....+|..++  +...........++.       +...+..
T Consensus       133 ~~~l~~~~---------~~~~f-l~y-~~~~~~~~~~L~~~~~~r~g~~--~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~  199 (300)
T PF05653_consen  133 LDELIALL---------SQPGF-LVY-FILVLVLILILIFFIKPRYGRR--NILVYISICSLIGSFTVLSAKAISILIKL  199 (300)
T ss_pred             HHHHHHHh---------cCcce-ehh-HHHHHHHHHHHHHhhcchhccc--ceEEEEEEeccccchhhhHHHHHHHHHHH
Confidence            10000000         00000 111 1111112222222222222221  111111111111111       1111111


Q ss_pred             HhcCCCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHhccCceeEEeccch-HHHHHHHHHHHHhcccc--hh----h
Q 017528          239 ALERDPHEWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPL-ALIFTTIASVFLLCEII--TL----G  311 (370)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~-~pi~~~~~~~~~~~e~~--~~----~  311 (370)
                      ..++ ..++  ..+..|..++. -+.+......+.++++++.+++.+.++.+. -...+.+-|.++++|.-  +.    .
T Consensus       200 ~~~g-~~~f--~~~~~y~l~~~-~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~  275 (300)
T PF05653_consen  200 TFSG-DNQF--TYPLTYLLLLV-LVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIG  275 (300)
T ss_pred             HhcC-chhh--hhhHHHHHHHH-HHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHH
Confidence            1111 1111  22333433333 344566777888999999999999987665 55566666777888753  44    3


Q ss_pred             hHHHHHHHHHHHHHHhc
Q 017528          312 RILGGLLLIGGLYAVLW  328 (370)
Q Consensus       312 ~~iG~~li~~g~~l~~~  328 (370)
                      ...|+.+++.|+++...
T Consensus       276 ~~~G~~~ii~GV~lL~~  292 (300)
T PF05653_consen  276 FLCGFLIIIIGVFLLSS  292 (300)
T ss_pred             HHHHHHHHHHhhheeec
Confidence            45678888889888754

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.17  E-value=4e-10  Score=93.21  Aligned_cols=138  Identities=20%  Similarity=0.181  Sum_probs=113.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhc------CCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccc---c-----c-cchh
Q 017528          190 GCFIMLSSNTSFGLWLVLQGFVMKS------YPSKLLFTTLQCFLSSIQSFAIAIALERDPHEWV---L-----G-WNVR  254 (370)
Q Consensus       190 G~~~~l~a~~~~a~~~v~~~~~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---~-----~-~~~~  254 (370)
                      |.++++.+.++.+++.+..|+..++      ..++.....+....+.+.++|.+++.|.......   .     . .+..
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            6789999999999999999998777      2388999999999999999999888776421110   0     0 2233


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHhc
Q 017528          255 LLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLW  328 (370)
Q Consensus       255 ~~~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~  328 (370)
                      +..++..|++ ........+..+++++|...++...+..+...+++++++||+++..+++|.++.++|.++|+|
T Consensus        81 ~~~~~~~~~~-~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   81 IFLLILSGLL-AFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHH-HHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            4555555553 556667788999999999999999999999999999999999999999999999999998864

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.15  E-value=1.9e-09  Score=99.15  Aligned_cols=136  Identities=13%  Similarity=0.056  Sum_probs=112.7

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHH
Q 017528           10 QRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFS   89 (370)
Q Consensus        10 ~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   89 (370)
                      ..|.++.+++++.|+...+..|...++ .++..... ...++.+++.++......  ....++..+...+..|+++..+.
T Consensus       147 ~~G~ll~l~aa~~~a~~~v~~r~~~~~-~~~~~~~~-~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~l~lgv~~t~~~  222 (293)
T PRK10532        147 LTGAALALGAGACWAIYILSGQRAGAE-HGPATVAI-GSLIAALIFVPIGALQAG--EALWHWSILPLGLAVAILSTALP  222 (293)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHHH-HHHHHHHHHHHHHHHccC--cccCCHHHHHHHHHHHHHHHHHH
Confidence            458999999999999999999988775 78877654 445666666666554222  22234555666678888888999


Q ss_pred             HHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhc
Q 017528           90 LDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFY  155 (370)
Q Consensus        90 ~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~  155 (370)
                      +.+|++++++.+++.++++.++.|+++.+++++++||+++..      +++|..+.+.|++.....
T Consensus       223 ~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~------~~iG~~lIl~~~~~~~~~  282 (293)
T PRK10532        223 YSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLI------QWLALGAIIAASMGSTLT  282 (293)
T ss_pred             HHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHHhc
Confidence            999999999999999999999999999999999999999999      999999999999998754

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.11  E-value=2.2e-09  Score=98.65  Aligned_cols=137  Identities=13%  Similarity=0.065  Sum_probs=115.2

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHH
Q 017528           10 QRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFS   89 (370)
Q Consensus        10 ~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   89 (370)
                      ..|.++.+++++.|+...+..|...+  -++...+++++.++.+.+.++............+.+.|......++++....
T Consensus       149 ~~G~l~~l~a~~~~a~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~  226 (292)
T PRK11272        149 PWGAILILIASASWAFGSVWSSRLPL--PVGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIA  226 (292)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcCC--CcchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHH
Confidence            46999999999999999999998654  3455667788888888877776543222111235677888888899888899


Q ss_pred             HHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhh
Q 017528           90 LDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAF  154 (370)
Q Consensus        90 ~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~  154 (370)
                      +.+|++++++.+++.++.+..+.|+++++++++++||+++..      +++|..+.+.|+++...
T Consensus       227 ~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~------~iiG~~lIi~gv~~~~~  285 (292)
T PRK11272        227 ISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPI------EWLALGVIVFAVVLVTL  285 (292)
T ss_pred             HHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHH------HHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999      99999999999998765

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.10  E-value=3.4e-09  Score=99.54  Aligned_cols=137  Identities=12%  Similarity=0.112  Sum_probs=105.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhCCCCh-HHHHHHHHHHHHHHHHHHHhhhhcccC----CCCCHHHHHHHHHHHHHH
Q 017528           11 RPYLTVILIQAIYAGMFLLSKAAFNGGMNN-FVFIFYRQAFATLFVAPISLAVEWKKA----PPLSFLTFCKIFFLSLIG   85 (370)
Q Consensus        11 ~~~l~~l~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~r~~~~~l~l~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~   85 (370)
                      .|.++++.+++.|+.+.++.|...+. +++ ...+++...++.+.+.+..+...+...    ...+.. ....+..++. 
T Consensus       189 lG~~l~l~aa~~wa~~~il~~~~~~~-~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~i~y~~i~-  265 (358)
T PLN00411        189 IGGALLTIQGIFVSVSFILQAHIMSE-YPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDIT-LITIVTMAII-  265 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH-cCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchH-HHHHHHHHHH-
Confidence            47889999999999999999988775 755 466667777776666555444332211    112222 2223344444 


Q ss_pred             HHHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhcc
Q 017528           86 ITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYN  156 (370)
Q Consensus        86 ~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~  156 (370)
                      ..+.+.+|++++++.+++.+++..++.|++++++++++++|+++..      +++|.++++.|+.++...+
T Consensus       266 t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~------~~iG~~LIl~Gv~l~~~~~  330 (358)
T PLN00411        266 TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLG------CLIGGILITLGFYAVMWGK  330 (358)
T ss_pred             HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHHhhh
Confidence            3678889999999999999999999999999999999999999999      9999999999999988643

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.08  E-value=1.8e-09  Score=99.40  Aligned_cols=138  Identities=10%  Similarity=0.083  Sum_probs=110.4

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccc--cccchhhHHHHHHHH
Q 017528          186 TWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHEWV--LGWNVRLLAVAYCGI  263 (370)
Q Consensus       186 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~g~  263 (370)
                      +..+|.+++++++++|+...+..|.. .+. +|.+..++++.++.+...+......+ .....  ......+ .....+.
T Consensus         5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~-~~~~~~~~R~~~a~~~l~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~   80 (296)
T PRK15430          5 QTRQGVLLALAAYFIWGIAPAYFKLI-YYV-PADEILTHRVIWSFFFMVVLMSICRQ-WSYLKTLIQTPQKI-FMLAVSA   80 (296)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHh-cCC-CHHHHHHHHHHHHHHHHHHHHHHHcc-HHHHHHHHcCHHHH-HHHHHHH
Confidence            44689999999999999999999764 455 57999999999998877776544322 11110  1112222 2333566


Q ss_pred             HHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHh
Q 017528          264 IVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVL  327 (370)
Q Consensus       264 ~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~  327 (370)
                      +..+..+.++++++++.+++.++.+.++.|+++.++++++++|+++..+++|.++.++|+++..
T Consensus        81 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~  144 (296)
T PRK15430         81 VLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL  144 (296)
T ss_pred             HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence            6778889999999999999999999999999999999999999999999999999999999875

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.02  E-value=7.1e-09  Score=95.43  Aligned_cols=133  Identities=17%  Similarity=0.223  Sum_probs=105.0

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHH
Q 017528           10 QRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFS   89 (370)
Q Consensus        10 ~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   89 (370)
                      ..|.++++.+++.|+...+..|...++ .++....+   ..+.+++.+...... ......++..+...+..++ ...+.
T Consensus       155 ~~G~~~~l~aa~~~A~~~v~~k~~~~~-~~~~~~~~---~~~~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~~~-~t~~~  228 (295)
T PRK11689        155 PLSYGLAFIGAFIWAAYCNVTRKYARG-KNGITLFF---ILTALALWIKYFLSP-QPAMVFSLPAIIKLLLAAA-AMGFG  228 (295)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhccCC-CCchhHHH---HHHHHHHHHHHHHhc-CccccCCHHHHHHHHHHHH-HHHHH
Confidence            458899999999999999999998765 78776533   223333333222212 1122345667777777775 45889


Q ss_pred             HHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhh
Q 017528           90 LDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAF  154 (370)
Q Consensus        90 ~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~  154 (370)
                      +.+|++++++.+++.++.+.++.|+++.+++++++||+++..      +++|.++++.|+.+...
T Consensus       229 ~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~------~~iG~~lI~~gv~~~~~  287 (295)
T PRK11689        229 YAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFS------FWQGVAMVTAGSLLCWL  287 (295)
T ss_pred             HHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHhHHHHhh
Confidence            999999999999999999999999999999999999999999      99999999999988765

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.02  E-value=8.4e-09  Score=94.28  Aligned_cols=133  Identities=11%  Similarity=0.027  Sum_probs=102.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHHH
Q 017528          191 CFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHEWVLGWNVRLLAVAYCGIIVTALTY  270 (370)
Q Consensus       191 ~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~  270 (370)
                      ..+.+++++++|..++..|+..++. ++  ...+....+.+...|....... ...+...+ ..++..+..+.+.....+
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~-~~--~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~   77 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKE-PD--FLWWALLAHSVLLTPYGLWYLA-QVGWSRLP-ATFWLLLAISAVANMVYF   77 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCch-hH--HHHHHHHHHHHHHHHHHHHhcc-cCCCCCcc-hhhHHHHHHHHHHHHHHH
Confidence            4678999999999999999877763 32  3455556666666665544211 12233222 334444455556788889


Q ss_pred             HHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHhc
Q 017528          271 YLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLW  328 (370)
Q Consensus       271 ~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~  328 (370)
                      .++++++++.+++.++++.++.|+++.+++++++||+++..+++|.++++.|+++...
T Consensus        78 ~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~  135 (281)
T TIGR03340        78 LGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL  135 (281)
T ss_pred             HHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence            9999999999999999999999999999999999999999999999999999998764

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>TIGR00688 rarD rarD protein

Probab=99.01  E-value=4.3e-09  Score=94.84  Aligned_cols=136  Identities=12%  Similarity=0.179  Sum_probs=107.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhcCCC---cccccccchh-hHHHHHHHHH
Q 017528          189 KGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDP---HEWVLGWNVR-LLAVAYCGII  264 (370)
Q Consensus       189 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~~~~~~~-~~~l~~~g~~  264 (370)
                      +|..+.++++++|+...+..|.. .+. +|.+..++++.++.+...+.........   ..++.....+ +..+...|++
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~~-~~~-~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   79 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKLL-KPL-PATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL   79 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHh-ccC-CHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence            47899999999999999999974 455 6799999999999887766554432210   1111111122 3334455544


Q ss_pred             HHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHh
Q 017528          265 VTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVL  327 (370)
Q Consensus       265 ~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~  327 (370)
                       .+..+.+++.+++++++..++.+.++.|+++.++++++++|+++..+++|.++.++|+++..
T Consensus        80 -~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~  141 (256)
T TIGR00688        80 -IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI  141 (256)
T ss_pred             -HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence             67888999999999999999999999999999999999999999999999999999988764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=98.96  E-value=2.4e-08  Score=86.49  Aligned_cols=276  Identities=15%  Similarity=0.132  Sum_probs=188.1

Q ss_pred             HHHHHHHHHHHHhC-CCCh--HHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017528           23 YAGMFLLSKAAFNG-GMNN--FVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFSLDLYGIALIY   99 (370)
Q Consensus        23 ~~~~~~~~k~~~~~-~~~~--~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~   99 (370)
                      +=.+..+..+..+. |+.|  +-+++.++++=..+.+.-+.. .+.+++..++|.+..+   +.+. .+...+-+-++.|
T Consensus        55 Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~-~~~k~r~iP~rtY~~l---a~~t-~gtmGLsn~SlgY  129 (367)
T KOG1582|consen   55 YLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQL-IQTKRRVIPWRTYVIL---AFLT-VGTMGLSNGSLGY  129 (367)
T ss_pred             HHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEEe-ecccceecchhHhhhh---Hhhh-hhccccCcCcccc
Confidence            44455555555543 4553  445565555443333332221 1222333455554443   3333 3444455678888


Q ss_pred             cChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCccccccccccccCCCCccccc
Q 017528          100 TSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNSQQIHG  179 (370)
Q Consensus       100 ~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (370)
                      .+-..-.++.+|--+=+.+.+.++-+.|.+..      +.++..+..+|+++....+. +.                   
T Consensus       130 LNYPtQviFKccKliPVmiggifIqGkRY~v~------d~~aA~lm~lGli~FTLADs-~~-------------------  183 (367)
T KOG1582|consen  130 LNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVH------DYIAAMLMSLGLIWFTLADS-QT-------------------  183 (367)
T ss_pred             ccCcHHHHHHhhhhhhhhheeeeeccccccHH------HHHHHHHHHHHHHhhhhccc-cc-------------------
Confidence            87766667778877778888888888888888      99999999999999887432 11                   


Q ss_pred             ccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-CchhHHHHHHHHHHHHHHHHHHHhcCCCccccc--ccchhhH
Q 017528          180 HVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYP-SKLLFTTLQCFLSSIQSFAIAIALERDPHEWVL--GWNVRLL  256 (370)
Q Consensus       180 ~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~  256 (370)
                         +++....|+...-.|-++-|.-.-.+++..+..+ +..+..++....+.+.++......+.-...|..  ..+....
T Consensus       184 ---sPNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~ty  260 (367)
T KOG1582|consen  184 ---SPNFNLIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTY  260 (367)
T ss_pred             ---CCCcceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHH
Confidence               3445567888888888888887778888777655 336777788888888777666555543333332  2223222


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHhcCcch
Q 017528          257 AVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLWGKSK  332 (370)
Q Consensus       257 ~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~~  332 (370)
                      ..++.=.+.+.++.......++..++..+..+....--+++++++++|..++|....-|..+++.|+++..+.++.
T Consensus       261 Gy~~~~s~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~n  336 (367)
T KOG1582|consen  261 GYAFLFSLAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKRN  336 (367)
T ss_pred             HHHHHHHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCCC
Confidence            3322223456677777777888899999999999999999999999999999999999999999999998877643

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.94  E-value=3.8e-08  Score=90.79  Aligned_cols=139  Identities=13%  Similarity=0.173  Sum_probs=108.6

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHhCC--CChHHHHHHHHHHHHHHHHHHHhhhhcc-----cCCCCCHHHHHHHHHHH
Q 017528           10 QRPYLTVILIQAIYAGMFLLSKAAFNGG--MNNFVFIFYRQAFATLFVAPISLAVEWK-----KAPPLSFLTFCKIFFLS   82 (370)
Q Consensus        10 ~~~~l~~l~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~r~~~~~l~l~~~~~~~~~~-----~~~~~~~~~~~~~~~~g   82 (370)
                      ..|.++.+++++.|+...+..|...+++  .+.....++....+.+.+.......+..     .....+...|...+..|
T Consensus       142 ~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  221 (299)
T PRK11453        142 MLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLA  221 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHH
Confidence            3699999999999999999999876531  2223334444444444333332221221     11234677888889999


Q ss_pred             HHHHHHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhh
Q 017528           83 LIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAF  154 (370)
Q Consensus        83 ~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~  154 (370)
                      ++.....+.+|++++++.++..++.+..+.|+++.+++++++||+++..      +++|..+.+.|+.+...
T Consensus       222 i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~------~~iG~~lI~~gv~l~~~  287 (299)
T PRK11453        222 FVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGL------QFLGAVLIMAGLYINVF  287 (299)
T ss_pred             HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHH------HHHHHHHHHHHHHHHhc
Confidence            9998999999999999999999999999999999999999999999999      99999999999998765

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.83  E-value=5.7e-08  Score=77.22  Aligned_cols=120  Identities=16%  Similarity=0.091  Sum_probs=91.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHH
Q 017528          189 KGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHEWVLGWNVRLLAVAYCGIIVTAL  268 (370)
Q Consensus       189 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~  268 (370)
                      .|.++.+.+.++-+...++.|+-.++.++ ...... .    ...+ .. .  .        .+   ...++.|++++++
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~-~~~~~~-~----~~~~-~~-~--~--------~p---~~~i~lgl~~~~l   60 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLPL-LSHAWD-F----IAAL-LA-F--G--------LA---LRAVLLGLAGYAL   60 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCC-ccchhH-H----HHHH-HH-H--h--------cc---HHHHHHHHHHHHH
Confidence            36788899999999999999988877543 221111 0    0000 00 0  0        10   1245668889999


Q ss_pred             HHHHHHHHHhccCceeEEeccchHHHHHHHHHHH--HhcccchhhhHHHHHHHHHHHHHHhcC
Q 017528          269 TYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVF--LLCEIITLGRILGGLLLIGGLYAVLWG  329 (370)
Q Consensus       269 ~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~--~~~e~~~~~~~iG~~li~~g~~l~~~~  329 (370)
                      ++.+|.+++++.+.+.+.++....++...+.++.  ++||++++.+++|+++|++|+++....
T Consensus        61 a~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~  123 (129)
T PRK02971         61 SMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP  123 (129)
T ss_pred             HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence            9999999999999999999999998888888885  899999999999999999999998653

>TIGR00803 nst UDP-galactose transporter

Probab=98.81  E-value=4.2e-08  Score=86.45  Aligned_cols=210  Identities=14%  Similarity=0.051  Sum_probs=126.9

Q ss_pred             hHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCcccc-----ccccccccCCCCcccc
Q 017528          104 LAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRL-----LCHHHIFGHHNSQQIH  178 (370)
Q Consensus       104 ~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~-----~~~~~~~~~~~~~~~~  178 (370)
                      ......+..++++++.++...++|++..      ++++.++...|+......+ .+...     ........+..+   +
T Consensus         6 a~~~~~s~~l~~v~l~~~~~~~~~~~~~------~i~~~~l~~~g~l~~~ls~-~q~~al~~l~~~~~~~~~~~~~---~   75 (222)
T TIGR00803         6 IHIIFKQNNLVLIALGNLLAAGKQVTQL------KILSTALMTLGSLVASLGD-DQWFSLKLLKLGVAIVQMVQSS---A   75 (222)
T ss_pred             chHHHHhcchHHHHHhcccccceeeehH------HHHHHHHHHHHHHHhHhhH-HHHHHHHHHHHhHeeeecCCCC---c
Confidence            3445567888888888888888888877      8888888888887544321 10000     000000000000   0


Q ss_pred             cccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHH-HHHHHHHHHHHHHhcCCC-cccccccchhhH
Q 017528          179 GHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQC-FLSSIQSFAIAIALERDP-HEWVLGWNVRLL  256 (370)
Q Consensus       179 ~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~  256 (370)
                      .+. ...+...|....+.+.++-+...+++++..++.+........+. .++.+.........+.+. ..+...  ..+.
T Consensus        76 ~~~-~~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~  152 (222)
T TIGR00803        76 KTL-MFGNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFF--IGYP  152 (222)
T ss_pred             ccc-ccccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcc--cCCc
Confidence            000 22355678888888888888899999887766432111111111 222221121111111110 011100  0111


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHH
Q 017528          257 AVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAV  326 (370)
Q Consensus       257 ~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~  326 (370)
                      ...+.-++..+.+..+..+.+|+.++...+....++++++.+++++++||+++..+++|+.+++.|+.++
T Consensus       153 ~~~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       153 TAVWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             hHHHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence            1111222346677788999999999999999999999999999999999999999999999999987653

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.79  E-value=3.4e-08  Score=91.23  Aligned_cols=140  Identities=11%  Similarity=0.140  Sum_probs=107.9

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHHHHHHHHhhhhcccCCC---------CCHHH-HHH
Q 017528            9 KQRPYLTVILIQAIYAGMFLLSKAAFNG-GMNNFVFIFYRQAFATLFVAPISLAVEWKKAPP---------LSFLT-FCK   77 (370)
Q Consensus         9 ~~~~~l~~l~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~---------~~~~~-~~~   77 (370)
                      +..|.++.+++++.|+...+..|...++ ++++...+++....+.++++|+....+......         ..... +..
T Consensus       143 ~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (302)
T TIGR00817       143 NWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTV  222 (302)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHH
Confidence            3469999999999999999999988761 399999999999999999988876533211000         00011 111


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhh
Q 017528           78 IFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAF  154 (370)
Q Consensus        78 ~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~  154 (370)
                      .+..+.......+.+++.+++++++..+++...+.|+++.++++++++|+++..      +++|..+++.|+.+...
T Consensus       223 ~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~------~~~G~~lil~Gv~l~~~  293 (302)
T TIGR00817       223 SLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQ------QVFGTGIAIAGVFLYSR  293 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchh------HHHHHHHHHHHHHHHHH
Confidence            223333232344467778999999999999999999999999999999999999      99999999999998764

specificities overlap.

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=98.78  E-value=1.7e-09  Score=92.34  Aligned_cols=279  Identities=15%  Similarity=0.121  Sum_probs=189.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHH
Q 017528           11 RPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFSL   90 (370)
Q Consensus        11 ~~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   90 (370)
                      ..++.+++-++.||+.+.+....   |-+|-+.+.--.+.+.++.+.+.++    ..|..+.+.+...++.|.+. ..++
T Consensus         2 ~~~liaL~P~l~WGsip~v~~k~---GG~p~qQ~lGtT~GALifaiiv~~~----~~p~~T~~~~iv~~isG~~W-s~GQ   73 (288)
T COG4975           2 MDLLIALLPALGWGSIPLVANKF---GGKPYQQTLGTTLGALIFAIIVFLF----VSPELTLTIFIVGFISGAFW-SFGQ   73 (288)
T ss_pred             hhHHHHHHHHHHhcccceeeeec---CCChhHhhhhccHHHHHHHHHHhee----ecCccchhhHHHHHHhhhHh-hhhh
Confidence            35788899999999988776544   5667776655554555554444443    34456778888889999888 8999


Q ss_pred             HHHHHHHhhcChhhHhhhc-cchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCccccccccccc
Q 017528           91 DLYGIALIYTSATLAAATT-NCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIF  169 (370)
Q Consensus        91 ~~~~~al~~~~~~~~~~i~-~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~~~~~  169 (370)
                      ...+.|+++.+++.+.++. ...-+-+.+++.+++||--+..+.  ....+++++.++|+.+-...+.++.         
T Consensus        74 ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~--IlG~iAliliviG~~lTs~~~~~nk---------  142 (288)
T COG4975          74 ANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQI--ILGFIALILIVIGIYLTSKQDRNNK---------  142 (288)
T ss_pred             hhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhH--HHHHHHHHHHHHhheEeeeeccccc---------
Confidence            9999999999999999998 788888999999999987666510  0134566777788877665322110         


Q ss_pred             cCCCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhcCCCccccc
Q 017528          170 GHHNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHEWVL  249 (370)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  249 (370)
                                ++++..+..+|....+.+.+.|-.|.+..+...-+.   .....-+.....+..+.+. ..+.+.     
T Consensus       143 ----------~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~v~g---~saiLPqAiGMv~~ali~~-~~~~~~-----  203 (288)
T COG4975         143 ----------EEENPSNLKKGIVILLISTLGYVGYVVLFQLFDVDG---LSAILPQAIGMVIGALILG-FFKMEK-----  203 (288)
T ss_pred             ----------cccChHhhhhheeeeeeeccceeeeEeeeccccccc---hhhhhHHHHHHHHHHHHHh-hccccc-----
Confidence                      001455677899999999999999999876654221   2222222222222222222 222111     


Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhH----HHHHHHHHHHHH
Q 017528          250 GWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRI----LGGLLLIGGLYA  325 (370)
Q Consensus       250 ~~~~~~~~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~----iG~~li~~g~~l  325 (370)
                      ...+..+.-+..|+ .-+++..++..+.++.+..+.=.+.-+..+++.+-+.++++|+=|..++    +|.+++++|.++
T Consensus       204 ~~~K~t~~nii~G~-~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~  282 (288)
T COG4975         204 RFNKYTWLNIIPGL-IWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAIL  282 (288)
T ss_pred             chHHHHHHHHhhHH-HHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhh
Confidence            11122222334454 4667778888888888888888888899999999999999999887664    578888888776


Q ss_pred             Hhc
Q 017528          326 VLW  328 (370)
Q Consensus       326 ~~~  328 (370)
                      ...
T Consensus       283 lg~  285 (288)
T COG4975         283 LGI  285 (288)
T ss_pred             hhe
Confidence            543

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.77  E-value=3.5e-08  Score=77.14  Aligned_cols=106  Identities=19%  Similarity=0.256  Sum_probs=79.9

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHH
Q 017528          224 LQCFLSSIQSFAIAIALERDPHEWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFL  303 (370)
Q Consensus       224 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~  303 (370)
                      +...++.+..........+..+.++....+.+...+..|++....++.++.++.++.++ .++.+..++|+++.++++++
T Consensus         3 ~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~   81 (113)
T PF13536_consen    3 FRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLF   81 (113)
T ss_pred             HHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHH
Confidence            44555666555555443322111222222445566666777667899999999999995 88899999999999999999


Q ss_pred             hcccchhhhHHHHHHHHHHHHHHhcCc
Q 017528          304 LCEIITLGRILGGLLLIGGLYAVLWGK  330 (370)
Q Consensus       304 ~~e~~~~~~~iG~~li~~g~~l~~~~~  330 (370)
                      ++|+++..+++|.+++++|+++..+.+
T Consensus        82 ~~er~~~~~~~a~~l~~~Gv~li~~~~  108 (113)
T PF13536_consen   82 FKERLSPRRWLAILLILIGVILIAWSD  108 (113)
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHhhhh
Confidence            999999999999999999999987754

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.69  E-value=6.2e-07  Score=74.03  Aligned_cols=133  Identities=13%  Similarity=0.180  Sum_probs=113.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhC------CCChHHHHHHHHHHHHHHHHHHHhhhhcccCCC----C-------CHHH
Q 017528           12 PYLTVILIQAIYAGMFLLSKAAFNG------GMNNFVFIFYRQAFATLFVAPISLAVEWKKAPP----L-------SFLT   74 (370)
Q Consensus        12 ~~l~~l~~~~~~~~~~~~~k~~~~~------~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~----~-------~~~~   74 (370)
                      |.++++.+.++.+...+..|...++      +.++.++..+....+.+++.+.....+.....+    .       +.+.
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            5678899999999999999987765      689999999999999999999887755443110    0       2344


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhh
Q 017528           75 FCKIFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAAT  151 (370)
Q Consensus        75 ~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~l  151 (370)
                      +...+..|+++ ...+...+..++++++...+++.....+++.++++++++|+++..      ++.|+.+++.|+++
T Consensus        81 ~~~~~~~~~~~-~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~------~~~G~~l~~~G~~~  150 (153)
T PF03151_consen   81 IFLLILSGLLA-FLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPL------QIIGIVLALVGVLL  150 (153)
T ss_pred             HHHHHHHHHHH-HHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHH------HHHHHHHHHHHHhe
Confidence            66667777777 788889999999999999999999999999999999999999999      99999999999875

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=98.68  E-value=1.1e-07  Score=84.81  Aligned_cols=272  Identities=13%  Similarity=0.149  Sum_probs=163.1

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHH
Q 017528            8 DKQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGIT   87 (370)
Q Consensus         8 ~~~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   87 (370)
                      +...|.++++.+.+..|....+-|....+ ...   ..               .|.......+-   .-+.+..|++.+.
T Consensus        18 d~~~G~~LaissS~~Ig~sfilkKkgl~r-~~~---~~---------------~ra~~gg~~yl---~~~~Ww~G~ltm~   75 (335)
T KOG2922|consen   18 DNIIGLVLAISSSIFIGSSFILKKKGLKR-AGA---SG---------------LRAGEGGYGYL---KEPLWWAGMLTMI   75 (335)
T ss_pred             CceeeeeehhhccEEEeeehhhhHHHHHH-Hhh---hc---------------ccccCCCcchh---hhHHHHHHHHHHH
Confidence            45678899999999999999999987665 111   00               00111111111   2244556776667


Q ss_pred             HHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCccccccccc
Q 017528           88 FSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHH  167 (370)
Q Consensus        88 ~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~~~  167 (370)
                      .+...-|.|..+.|++.++++-++..++.++++..+++||++..      ..+|..++++|-.++.. ..|+.....+.+
T Consensus        76 vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~------g~lGc~l~v~Gst~iV~-haP~e~~i~t~~  148 (335)
T KOG2922|consen   76 VGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLL------GILGCVLCVVGSTTIVI-HAPKEQEIESVE  148 (335)
T ss_pred             HHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHh------hhhheeEEecccEEEEE-ecCcccccccHH
Confidence            77777789999999999999999999999999999999999999      99999999999877775 344332222221


Q ss_pred             cccCCCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCC--CchhHHHHHHHHHHH-------HHHHHHH
Q 017528          168 IFGHHNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYP--SKLLFTTLQCFLSSI-------QSFAIAI  238 (370)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~--~~~~~~~~~~~~~~i-------~~~~~~~  238 (370)
                      +..+..             ...+.++-.  .+.--+..++.-...+++.  +++.........++.       +...+-.
T Consensus       149 el~~~~-------------~~~~Fliy~--~~iil~~~il~~~~~p~~g~tnilvyi~i~s~iGS~tV~svKalg~aikl  213 (335)
T KOG2922|consen  149 EVWELA-------------TEPGFLVYV--IIIILIVLILIFFYAPRYGQTNILVYIGICSLIGSLTVMSVKALGIAIKL  213 (335)
T ss_pred             HHHHHh-------------cCccHHHHH--HHHHHHHHHHheeecccccccceeehhhHhhhhcceeeeeHHHHHHHHHH
Confidence            111100             011211111  1111111111111122221  334443333333321       1111111


Q ss_pred             HhcCCCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHhccCceeEEeccch-HHHHHHHHHHHHhcccc--h----hh
Q 017528          239 ALERDPHEWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPL-ALIFTTIASVFLLCEII--T----LG  311 (370)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~-~pi~~~~~~~~~~~e~~--~----~~  311 (370)
                      ...++.+ ..  .+..|..++.+.. +........++|++..+++.++++.+. -..++++.+.++|+|--  +    ..
T Consensus       214 t~~g~~q-l~--~~~ty~~~l~~~~-~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~  289 (335)
T KOG2922|consen  214 TFSGNNQ-LF--YPLTWIFLLVVAT-CVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAG  289 (335)
T ss_pred             HhcCCcc-cc--cHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHH
Confidence            2222211 11  2234555555444 566777888999999999999988665 56777777888888743  2    34


Q ss_pred             hHHHHHHHHHHHHHHh
Q 017528          312 RILGGLLLIGGLYAVL  327 (370)
Q Consensus       312 ~~iG~~li~~g~~l~~  327 (370)
                      ...|+..++.|+++..
T Consensus       290 ~~~Gf~ti~~G~flL~  305 (335)
T KOG2922|consen  290 ELCGFVTIFLGIFLLH  305 (335)
T ss_pred             HHHhHHHhhheeeEee
Confidence            5678888899988874

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.67  E-value=4.9e-07  Score=70.12  Aligned_cols=69  Identities=20%  Similarity=0.210  Sum_probs=63.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhh
Q 017528           79 FFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLA  153 (370)
Q Consensus        79 ~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~  153 (370)
                      ...+++++.+.+.++..++++.|.+.+..+.++.++++.+++++++|||++.+      +++|+.+++.|++++.
T Consensus        40 ~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~------~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         40 LGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPR------HWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHh
Confidence            34444666889999999999999999999999999999999999999999999      9999999999998875

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.59  E-value=1.9e-06  Score=78.65  Aligned_cols=134  Identities=19%  Similarity=0.186  Sum_probs=107.9

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHH-HHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHH
Q 017528           10 QRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIF-YRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITF   88 (370)
Q Consensus        10 ~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~-~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   88 (370)
                      ..|.++.+++++.|+...+..|... + .++..... +..........+...  .... ...+.+.+......|+++...
T Consensus       153 ~~g~~~~l~a~~~~a~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~g~~~~~i  227 (292)
T COG0697         153 LLGLLLALAAALLWALYTALVKRLS-R-LGPVTLALLLQLLLALLLLLLFFL--SGFG-APILSRAWLLLLYLGVFSTGL  227 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc-C-CChHHHHHHHHHHHHHHHHHHHHh--cccc-ccCCHHHHHHHHHHHHHHHHH
Confidence            4799999999999999999999776 4 67766666 444422222222222  1111 345678889999999998678


Q ss_pred             HHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhh
Q 017528           89 SLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAF  154 (370)
Q Consensus        89 ~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~  154 (370)
                      .+.++++++++.+++.++++..+.|++..++++++++|+++..      +++|+.+.+.|+.+...
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~------~~~G~~li~~g~~l~~~  287 (292)
T COG0697         228 AYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPA------QLLGAALVVLGVLLASL  287 (292)
T ss_pred             HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHhc
Confidence            9999999999999999999999999999999999999999999      99999999999998764

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.58  E-value=8e-07  Score=81.48  Aligned_cols=129  Identities=15%  Similarity=0.138  Sum_probs=103.5

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHH----HHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHH
Q 017528           10 QRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQA----FATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIG   85 (370)
Q Consensus        10 ~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   85 (370)
                      .+|+++.+++++.++.+....|..   +.+|...++....    .+.+++.+.     ++.++ .+.+..+..++.|++.
T Consensus       151 ~~Gi~~~l~sg~~y~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~-----~~~~~-~~~~~~~~~~~~Gi~~  221 (290)
T TIGR00776       151 KKGILLLLMSTIGYLVYVVVAKAF---GVDGLSVLLPQAIGMVIGGIIFNLGH-----ILAKP-LKKYAILLNILPGLMW  221 (290)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHc---CCCcceehhHHHHHHHHHHHHHHHHH-----hcccc-hHHHHHHHHHHHHHHH
Confidence            679999999999999999999965   3888888666655    333333332     11122 2344455556688885


Q ss_pred             HHHHHHHHHHHHh-hcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchh----hhHHHHHhhhhhhhh
Q 017528           86 ITFSLDLYGIALI-YTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKL----VGILICIGGAATLAF  154 (370)
Q Consensus        86 ~~~~~~~~~~al~-~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~----~~i~l~~~Gv~li~~  154 (370)
                       ...+.+|+.+.+ +.+++.+.++.+..|+...+++++++||+.+++      ++    +|.++.+.|+.++..
T Consensus       222 -~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~------~~~~~~iG~~lIi~~~~l~~~  288 (290)
T TIGR00776       222 -GIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKR------EMIAISVGIILIIIAANILGI  288 (290)
T ss_pred             -HHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcc------eeehhHHHHHHHHHHHHHHhc
Confidence             899999999999 999999999999999999999999999999999      99    999999999988753

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.57  E-value=1.8e-06  Score=81.33  Aligned_cols=138  Identities=13%  Similarity=0.081  Sum_probs=101.2

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHhC------CCChHHHHHHHHHHHHHHHHHHHhhhhcccC--------CCCCH---
Q 017528           10 QRPYLTVILIQAIYAGMFLLSKAAFNG------GMNNFVFIFYRQAFATLFVAPISLAVEWKKA--------PPLSF---   72 (370)
Q Consensus        10 ~~~~l~~l~~~~~~~~~~~~~k~~~~~------~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~--------~~~~~---   72 (370)
                      ..|.++++++++.|+...+..|...++      +.++.....+...++.++++|+....+....        ...+.   
T Consensus       193 ~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~  272 (350)
T PTZ00343        193 WLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTK  272 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccch
Confidence            469999999999999999999998764      1567777777788888888888764322110        00011   


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhh
Q 017528           73 LTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATL  152 (370)
Q Consensus        73 ~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li  152 (370)
                      .......+.+.+...+.+.+.+.+++++++...++...+.|+++.+++++++||+++..      +++|.++++.|+.+-
T Consensus       273 ~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~------~~iG~~lii~Gv~lY  346 (350)
T PTZ00343        273 GIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLL------GYLGMAVAILGALLY  346 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchH------hHHHHHHHHHHHHHH
Confidence            11111122222222333444446999999999999999999999999999999999999      999999999999875


Q ss_pred             h
Q 017528          153 A  153 (370)
Q Consensus       153 ~  153 (370)
                      .
T Consensus       347 s  347 (350)
T PTZ00343        347 S  347 (350)
T ss_pred             h
Confidence            4

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.54  E-value=9.1e-07  Score=78.20  Aligned_cols=140  Identities=14%  Similarity=0.160  Sum_probs=114.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccc-cccchhhHHHHHHHHHHH
Q 017528          188 IKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHEWV-LGWNVRLLAVAYCGIIVT  266 (370)
Q Consensus       188 ~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~g~~~~  266 (370)
                      ..|+++++.|-+.|+..-.+.|-. +.. ++.++..++.+.+......+.........-+. ...++.+...+..+++ -
T Consensus         6 ~~Gil~~l~Ay~lwG~lp~y~kll-~~~-~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l-i   82 (293)
T COG2962           6 RKGILLALLAYLLWGLLPLYFKLL-EPL-PATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL-I   82 (293)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHH-ccC-CHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH-H
Confidence            479999999999999988887765 444 45899999999999888776655543222121 2345566666666665 5


Q ss_pred             HHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHhcCc
Q 017528          267 ALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLWGK  330 (370)
Q Consensus       267 ~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~  330 (370)
                      ....+.|.++..+.....+|.-.+++|++.+++|.++++|+++..|++..++..+|+....|..
T Consensus        83 ~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~  146 (293)
T COG2962          83 GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLL  146 (293)
T ss_pred             HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc
Confidence            5788999999999999999999999999999999999999999999999999999999877644

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.46  E-value=4.2e-06  Score=66.57  Aligned_cols=119  Identities=19%  Similarity=0.141  Sum_probs=91.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHH
Q 017528           11 RPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFSL   90 (370)
Q Consensus        11 ~~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   90 (370)
                      +++++++++.++-+..-++.|...++ .+....... . ...+   . ..         .+   ....+..|+..+.+++
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~-~g~~~~~~~-~-~~~~---~-~~---------~~---p~~~i~lgl~~~~la~   62 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSR-LPLLSHAWD-F-IAAL---L-AF---------GL---ALRAVLLGLAGYALSM   62 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhh-CCCccchhH-H-HHHH---H-HH---------hc---cHHHHHHHHHHHHHHH
Confidence            47888899999989999999998875 544332211 0 0000   0 00         00   1124667777778999


Q ss_pred             HHHHHHHhhcChhhHhhhccchhHHHHHHHHH--HhhccccccccCccchhhhHHHHHhhhhhhhh
Q 017528           91 DLYGIALIYTSATLAAATTNCLPAITFFLAVL--LRMEVLKLKTVPGVAKLVGILICIGGAATLAF  154 (370)
Q Consensus        91 ~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l--~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~  154 (370)
                      .+|.+++++.+++.+.++.+..+.++.+.++.  ++||+++..      +++|+.++++|++++..
T Consensus        63 ~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~------~~iGi~lIi~GV~lv~~  122 (129)
T PRK02971         63 LCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLK------KTLGVACIMLGVWLINL  122 (129)
T ss_pred             HHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHhcc
Confidence            99999999999999999999999889888885  899999999      99999999999999874

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.44  E-value=1.1e-06  Score=68.21  Aligned_cols=67  Identities=19%  Similarity=0.208  Sum_probs=61.7

Q ss_pred             HHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHh
Q 017528          261 CGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVL  327 (370)
Q Consensus       261 ~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~  327 (370)
                      .++++.+.++.++..++++.+.+.+-.+.++.++.+.+++++++||++++.+++|.+++++|+++..
T Consensus        42 ~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         42 LALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            3445678899999999999999999999999999999999999999999999999999999998764

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=98.40  E-value=4.7e-06  Score=71.95  Aligned_cols=137  Identities=18%  Similarity=0.095  Sum_probs=117.6

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHH
Q 017528            9 KQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITF   88 (370)
Q Consensus         9 ~~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   88 (370)
                      .-.|..+++.+..+|+.+.+..|...+. .+...-+..-+.++.++.+|+-....  ...-.++......+..+++...+
T Consensus       146 Dp~Gv~~Al~AG~~Wa~YIv~G~r~g~~-~~g~~g~a~gm~vAaviv~Pig~~~a--g~~l~~p~ll~laLgvavlSSal  222 (292)
T COG5006         146 DPVGVALALGAGACWALYIVLGQRAGRA-EHGTAGVAVGMLVAALIVLPIGAAQA--GPALFSPSLLPLALGVAVLSSAL  222 (292)
T ss_pred             CHHHHHHHHHHhHHHHHHHHHcchhccc-CCCchHHHHHHHHHHHHHhhhhhhhc--chhhcChHHHHHHHHHHHHhccc
Confidence            3468999999999999999999988765 66677778889999999999876422  22234577788889999999999


Q ss_pred             HHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhh
Q 017528           89 SLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAF  154 (370)
Q Consensus        89 ~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~  154 (370)
                      .+.+-..+++..|...-+.+.++.|.+.++.+++++||+++..      ||.++...+.+.+-...
T Consensus       223 PYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~------qwlaI~~ViaAsaG~~l  282 (292)
T COG5006         223 PYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLI------QWLAIAAVIAASAGSTL  282 (292)
T ss_pred             chHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHH------HHHHHHHHHHHHhcccc
Confidence            9999999999999999999999999999999999999999999      99999988887764443

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=98.32  E-value=1.5e-05  Score=73.72  Aligned_cols=140  Identities=11%  Similarity=0.043  Sum_probs=111.9

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccCCCC--CHHHHHHHHHHHHHH
Q 017528            8 DKQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPL--SFLTFCKIFFLSLIG   85 (370)
Q Consensus         8 ~~~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~   85 (370)
                      +..+|.++++.+++++|.+++..+...++ .++.++..+-.+++.++..+.....++....+.  +++.....+..+ +.
T Consensus       165 ~~i~GDll~l~~a~lya~~nV~~E~~v~~-~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~~-~~  242 (334)
T PF06027_consen  165 NPILGDLLALLGAILYAVSNVLEEKLVKK-APRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGYA-LC  242 (334)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHhccc-CCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHHH-HH
Confidence            55789999999999999999999999986 899999988888998888877766565554443  333333333333 33


Q ss_pred             HHHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhc
Q 017528           86 ITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFY  155 (370)
Q Consensus        86 ~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~  155 (370)
                      ....+.+.-..++++++....+-.-+..+++.+++.+++|+++++.      .++|.+++++|.++....
T Consensus       243 lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~l------y~~af~lIiiG~vvy~~~  306 (334)
T PF06027_consen  243 LFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWL------YILAFALIIIGFVVYNLA  306 (334)
T ss_pred             HHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHH------HHHHHHHHHHHhheEEcc
Confidence            3556667778889999988888778899999999999999999999      999999999999998753

Some of the sequences in this family are annotated as putative membrane proteins.

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=98.06  E-value=0.0017  Score=59.28  Aligned_cols=300  Identities=15%  Similarity=0.130  Sum_probs=179.4

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhh-ccc----CCCCCHHHHHHHHHHHH
Q 017528            9 KQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVE-WKK----APPLSFLTFCKIFFLSL   83 (370)
Q Consensus         9 ~~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~-~~~----~~~~~~~~~~~~~~~g~   83 (370)
                      -..|+++..++.+.-|+.++-.|...+  .+-...=....+++.++ .|+..... -++    ....+...+....+.|+
T Consensus         5 ii~Gii~h~iGg~~~~sfy~P~kkvk~--WsWEs~Wlv~gi~swli-~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~   81 (344)
T PF06379_consen    5 IILGIIFHAIGGFASGSFYVPFKKVKG--WSWESYWLVQGIFSWLI-VPWLWALLAIPDFFSIYSATPASTLFWTFLFGV   81 (344)
T ss_pred             HHHHHHHHHHHHHHhhhhccchhhcCC--ccHHHHHHHHHHHHHHH-HHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHH
Confidence            357899999999999999999997644  45444333344444333 33332211 111    13345677888899999


Q ss_pred             HHHHHHHHHHHHHHhhcChhhHhhhc-cchhHHHHHHHHHHhhccc-cccccCccchhhhHHHHHhhhhhhhhccCCccc
Q 017528           84 IGITFSLDLYGIALIYTSATLAAATT-NCLPAITFFLAVLLRMEVL-KLKTVPGVAKLVGILICIGGAATLAFYNGPQLR  161 (370)
Q Consensus        84 ~~~~~~~~~~~~al~~~~~~~~~~i~-~~~pi~~~ll~~l~~~e~~-~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~  161 (370)
                      +. ..+...|-.+++|+..+...-+. .+..++-.++-.++.++-- -..++-+...++|++++++|+.++......+++
T Consensus        82 lW-GIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke~  160 (344)
T PF06379_consen   82 LW-GIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMKEK  160 (344)
T ss_pred             HH-hcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhhhh
Confidence            98 88888999999999998887655 7777777777666654210 122344556899999999999998863211111


Q ss_pred             cccccccccCCCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHh-------hcCCCchh----HHHHHHHHHH
Q 017528          162 LLCHHHIFGHHNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVM-------KSYPSKLL----FTTLQCFLSS  230 (370)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~-------~~~~~~~~----~~~~~~~~~~  230 (370)
                      ..+ .             +. ++.+..+|.++++++++..|.+++-...-.       +...+|..    .....+..+.
T Consensus       161 ~~~-~-------------~~-~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~GGf  225 (344)
T PF06379_consen  161 ELG-E-------------EA-KEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVVLWGGF  225 (344)
T ss_pred             hhc-c-------------ch-hhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhhhhhHH
Confidence            100 0             00 456778999999999999999887764321       11112221    2222333344


Q ss_pred             HHHHHHHHHhc---CCC---cccccccc---hhhHHHHHHHHHHHHHHHHHHHHHHhccCce--eE--EeccchHHHHHH
Q 017528          231 IQSFAIAIALE---RDP---HEWVLGWN---VRLLAVAYCGIIVTALTYYLQAWVIEKKGPV--FL--AMSTPLALIFTT  297 (370)
Q Consensus       231 i~~~~~~~~~~---~~~---~~~~~~~~---~~~~~l~~~g~~~~~~~~~~~~~a~~~~~~~--~~--s~~~~~~pi~~~  297 (370)
                      +.-+..+++..   ++.   .+.....+   ..+...+..|+ .=..++.+|..+-.+.+..  .+  .+.+.+..+++-
T Consensus       226 ~tN~~yc~~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~-lWy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~sn  304 (344)
T PF06379_consen  226 ITNLIYCLILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGV-LWYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFSN  304 (344)
T ss_pred             HHHHHHHHHHHhhcCCCccccccccccchhHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHH
Confidence            44444444431   111   12211111   22333333333 2345566666676666644  22  345677788888


Q ss_pred             HHHHHHhcc------cchhhhHHHHHHHHHHHHHHhcC
Q 017528          298 IASVFLLCE------IITLGRILGGLLLIGGLYAVLWG  329 (370)
Q Consensus       298 ~~~~~~~~e------~~~~~~~iG~~li~~g~~l~~~~  329 (370)
                      +++.+. +|      +.-...++|+++++.+++++-+.
T Consensus       305 vwGl~l-kEWKg~s~kt~~vl~~G~~vlI~s~~ivG~G  341 (344)
T PF06379_consen  305 VWGLIL-KEWKGASKKTIRVLVLGIAVLILSVVIVGYG  341 (344)
T ss_pred             HHHHHH-HHhccCCcccHHHHHHHHHHHHHHHHHHhcc
Confidence            888754 43      34455678999999888876543

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=97.95  E-value=3.9e-06  Score=72.97  Aligned_cols=135  Identities=15%  Similarity=0.108  Sum_probs=100.3

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHH
Q 017528          186 TWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHEWVLGWNVRLLAVAYCGIIV  265 (370)
Q Consensus       186 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~  265 (370)
                      ..++|..+..++ ..+....+..++..+.  +|.......+.+-..+..|..++....  .+.....+.|.  +.=|+ .
T Consensus        35 ~p~~gl~l~~vs-~ff~~~~vv~t~~~e~--~p~e~a~~r~l~~mlit~pcliy~~~~--v~gp~g~R~~L--iLRg~-m  106 (346)
T KOG4510|consen   35 KPNLGLLLLTVS-YFFNSCMVVSTKVLEN--DPMELASFRLLVRMLITYPCLIYYMQP--VIGPEGKRKWL--ILRGF-M  106 (346)
T ss_pred             CCccCceehhhH-HHHhhHHHhhhhhhcc--ChhHhhhhhhhhehhhhheEEEEEeee--eecCCCcEEEE--Eeehh-h
Confidence            346788888888 7777778887777665  567777777666666666654332221  11222222232  33343 3


Q ss_pred             HHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHhc
Q 017528          266 TALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLW  328 (370)
Q Consensus       266 ~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~  328 (370)
                      +..+..+.++++++.+-+.+.++...+|+++.+++|.+++|+.+..+.+|..+.+.|+++..+
T Consensus       107 G~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvR  169 (346)
T KOG4510|consen  107 GFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVR  169 (346)
T ss_pred             hhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEec
Confidence            557788889999999999999999999999999999999999999999999999999998764

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=97.94  E-value=0.00015  Score=64.72  Aligned_cols=116  Identities=13%  Similarity=0.017  Sum_probs=89.2

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHH
Q 017528            8 DKQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGIT   87 (370)
Q Consensus         8 ~~~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   87 (370)
                      +..++++.++.+++.+..+.++.|..   +.++....+-+...-.+....+....    .++...|..++-.+.|++. .
T Consensus       135 ~~~kgi~~Ll~stigy~~Y~~~~~~~---~~~~~~~~lPqaiGm~i~a~i~~~~~----~~~~~~k~~~~nil~G~~w-~  206 (269)
T PF06800_consen  135 NMKKGILALLISTIGYWIYSVIPKAF---HVSGWSAFLPQAIGMLIGAFIFNLFS----KKPFFEKKSWKNILTGLIW-G  206 (269)
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHHhc---CCChhHhHHHHHHHHHHHHHHHhhcc----cccccccchHHhhHHHHHH-H
Confidence            34679999999999999999998874   48888777755444444333333332    1122234445567788887 8


Q ss_pred             HHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhcccccc
Q 017528           88 FSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLK  131 (370)
Q Consensus        88 ~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~  131 (370)
                      .++.+++.+.+....+.+-.+.++.+++..+.+.+++||+-+++
T Consensus       207 ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~k  250 (269)
T PF06800_consen  207 IGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKK  250 (269)
T ss_pred             HHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchh
Confidence            88899999999999999999999999999999999999998877

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.90  E-value=0.00017  Score=58.18  Aligned_cols=132  Identities=18%  Similarity=0.160  Sum_probs=100.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHH
Q 017528          190 GCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHEWVLGWNVRLLAVAYCGIIVTALT  269 (370)
Q Consensus       190 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~  269 (370)
                      ..++++.++.+-++......++.++.++|...+++.+..+.+.+....++.++.  +........|+..  .|.+..+..
T Consensus         2 ~~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p~w~~--lGG~lG~~~   77 (138)
T PF04657_consen    2 YILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRP--SLASLSSVPWWAY--LGGLLGVFF   77 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCChHHh--ccHHHHHHH
Confidence            367889999999999999999998887789999999999999998887776653  2221122233332  244456677


Q ss_pred             HHHHHHHHhccCceeEEec-cchHHHHHHHHHHH----HhcccchhhhHHHHHHHHHHHHH
Q 017528          270 YYLQAWVIEKKGPVFLAMS-TPLALIFTTIASVF----LLCEIITLGRILGGLLLIGGLYA  325 (370)
Q Consensus       270 ~~~~~~a~~~~~~~~~s~~-~~~~pi~~~~~~~~----~~~e~~~~~~~iG~~li~~g~~l  325 (370)
                      ..+.....++.+++....+ ..-+.+.+.++|.+    .-++++++.+++|.+++++|+++
T Consensus        78 V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   78 VLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            7788889999998777654 55577888888886    23577899999999999999864

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.85  E-value=5.3e-05  Score=59.16  Aligned_cols=67  Identities=22%  Similarity=0.388  Sum_probs=57.5

Q ss_pred             HHHHHHHHHHHHHHHhccCceeEEec-cchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHhcC
Q 017528          263 IIVTALTYYLQAWVIEKKGPVFLAMS-TPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLWG  329 (370)
Q Consensus       263 ~~~~~~~~~~~~~a~~~~~~~~~s~~-~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~  329 (370)
                      +...+++++++..++++.+.+.+=.+ .-+..+.+.+.+++++||++++.+++|++++++|++.....
T Consensus        37 i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~  104 (120)
T PRK10452         37 LVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSG  104 (120)
T ss_pred             HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence            44567889999999999988776655 45788999999999999999999999999999999987543

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.75  E-value=0.00056  Score=63.20  Aligned_cols=137  Identities=15%  Similarity=0.177  Sum_probs=111.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHHHHHHHHhh--hhccc-C---CCCCHHHHHHHHHHHHH
Q 017528           12 PYLTVILIQAIYAGMFLLSKAAFNG-GMNNFVFIFYRQAFATLFVAPISLA--VEWKK-A---PPLSFLTFCKIFFLSLI   84 (370)
Q Consensus        12 ~~l~~l~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~r~~~~~l~l~~~~~~--~~~~~-~---~~~~~~~~~~~~~~g~~   84 (370)
                      |+++++++.++-|......+...++ +.++.+..++-..++.++..+....  .+... .   ....+..+...+...++
T Consensus       155 G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~  234 (303)
T PF08449_consen  155 GIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLT  234 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHH
Confidence            9999999999999999999988854 7889999999999999888877665  21110 0   01123456666677777


Q ss_pred             HHHHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhc
Q 017528           85 GITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFY  155 (370)
Q Consensus        85 ~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~  155 (370)
                      + ..++.+.+.-.+..++...+++..+--+++.+++.++++++++..      +|.|+++.+.|..+=...
T Consensus       235 ~-~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~------~~~G~~lv~~g~~~~~~~  298 (303)
T PF08449_consen  235 G-ALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPL------QWIGIVLVFAGIFLYSYA  298 (303)
T ss_pred             H-HHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChH------HHHHHHHhHHHHHHHHHh
Confidence            7 667777788899999999999999999999999999999999999      999999999999886653

; GO: 0055085 transmembrane transport

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.71  E-value=0.00072  Score=54.57  Aligned_cols=130  Identities=15%  Similarity=0.138  Sum_probs=96.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCC-hHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 017528           13 YLTVILIQAIYAGMFLLSKAAFNGGMN-NFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFSLD   91 (370)
Q Consensus        13 ~l~~l~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   91 (370)
                      +++.+++....+....+...+.++ .+ |...+++.+..+++.+..+....+++..+..+ +.-++...-|+++ +..-.
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~~~-~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~-~~p~w~~lGG~lG-~~~V~   79 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLGKA-LGSPLVASFISFGVGFILLLIILLITGRPSLASLS-SVPWWAYLGGLLG-VFFVL   79 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH-hCccHHHHHHHHHHHHHHHHHHHHHhcccccchhc-cCChHHhccHHHH-HHHHH
Confidence            567778888888888888877776 65 99999999999999998888775554333332 2234445577887 77777


Q ss_pred             HHHHHHhhcChhhHhhhc-cchhHHHHHHHHH----HhhccccccccCccchhhhHHHHHhhhhh
Q 017528           92 LYGIALIYTSATLAAATT-NCLPAITFFLAVL----LRMEVLKLKTVPGVAKLVGILICIGGAAT  151 (370)
Q Consensus        92 ~~~~al~~~~~~~~~~i~-~~~pi~~~ll~~l----~~~e~~~~~~~~~~~~~~~i~l~~~Gv~l  151 (370)
                      +..+.....+++.+..+. .-+-+...++.++    .-+++++.+      +.+|+.+.++|+.+
T Consensus        80 ~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~------r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   80 SNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLR------RILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHH------HHHHHHHHHHHHhC
Confidence            888899999988888766 4455666666664    234666666      99999999999864

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=97.67  E-value=9.9e-05  Score=67.73  Aligned_cols=118  Identities=19%  Similarity=0.185  Sum_probs=88.0

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-chhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHH
Q 017528          186 TWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPS-KLLFTTLQCFLSSIQSFAIAIALERDPHEWVLGWNVRLLAVAYCGII  264 (370)
Q Consensus       186 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~  264 (370)
                      ++..|..+++.++++.+....++|+...+.+. +..-                    .. ...+......|+.    |.+
T Consensus         4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~--------------------~~-~~~~~l~~~~W~~----G~~   58 (300)
T PF05653_consen    4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRA--------------------GS-GGRSYLRRPLWWI----GLL   58 (300)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc--------------------cc-hhhHHHhhHHHHH----HHH
Confidence            45689999999999999999999987665431 0000                    00 0000001111222    333


Q ss_pred             HHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHhc
Q 017528          265 VTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLW  328 (370)
Q Consensus       265 ~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~  328 (370)
                      ..+++..+...++...+++.++++..+..++..+++.+++||+++..+++|+++++.|..+...
T Consensus        59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~  122 (300)
T PF05653_consen   59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVI  122 (300)
T ss_pred             HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEE
Confidence            4556677788899999999999999999999999999999999999999999999999987654

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.63  E-value=0.0002  Score=55.16  Aligned_cols=67  Identities=15%  Similarity=0.213  Sum_probs=55.8

Q ss_pred             HHHHHHHHHHHHHHHhccCceeEEec-cchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHhcC
Q 017528          263 IIVTALTYYLQAWVIEKKGPVFLAMS-TPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLWG  329 (370)
Q Consensus       263 ~~~~~~~~~~~~~a~~~~~~~~~s~~-~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~  329 (370)
                      +...+++++++..++++.+.+.+=.+ .-+..+.+.+.++++|+|++++.+++|++++++|+++....
T Consensus        37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~  104 (110)
T PRK09541         37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            34567788888889988887666544 44688888999999999999999999999999999998543

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.62  E-value=0.00024  Score=55.48  Aligned_cols=68  Identities=24%  Similarity=0.208  Sum_probs=61.3

Q ss_pred             HHHHHHHHHHHHHHHHHhhcChhhHhhhc-cchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhh
Q 017528           81 LSLIGITFSLDLYGIALIYTSATLAAATT-NCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAF  154 (370)
Q Consensus        81 ~g~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~  154 (370)
                      ..+.++..+++++..++++.|.+.+-.+. .+..+.+.+++.+++||+++..      +++|+.+.++|++.+-.
T Consensus        35 ~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~------~~~gi~lIi~GVi~l~l  103 (120)
T PRK10452         35 LMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLM------KIAGLTTLVAGIVLIKS  103 (120)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHhhc
Confidence            34455578999999999999999999886 7999999999999999999999      99999999999988864

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.57  E-value=0.00028  Score=53.27  Aligned_cols=67  Identities=28%  Similarity=0.306  Sum_probs=59.9

Q ss_pred             HHHHHHHHHHHHHHHHhhcChhhHhhhc-cchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhh
Q 017528           82 SLIGITFSLDLYGIALIYTSATLAAATT-NCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAF  154 (370)
Q Consensus        82 g~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~  154 (370)
                      .+.++.+++.+...++++.|.+.+-.+. ....+.+.+.++++++|+++..      +++++.+.+.|++.+-.
T Consensus        36 ~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~------~~~gl~LiiaGvi~Lk~  103 (106)
T COG2076          36 TIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLI------KLLGLALILAGVIGLKL  103 (106)
T ss_pred             HHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHH------HHHHHHHHHHHHHHhhh
Confidence            3444578889999999999999998777 8999999999999999999999      99999999999998754

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.57  E-value=0.00034  Score=53.88  Aligned_cols=67  Identities=18%  Similarity=0.206  Sum_probs=60.3

Q ss_pred             HHHHHHHHHHHHHHHHhhcChhhHhhhc-cchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhh
Q 017528           82 SLIGITFSLDLYGIALIYTSATLAAATT-NCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAF  154 (370)
Q Consensus        82 g~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~  154 (370)
                      .+.++.+++.++..++++.|.+.+-.+. .+..+.+.+++++++||+++..      +++|+.+.++|++.+-.
T Consensus        36 ~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~------~~~gi~lIi~GVi~l~l  103 (110)
T PRK09541         36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLP------AIIGMMLICAGVLVINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHhc
Confidence            3455578888999999999999999885 7899999999999999999999      99999999999999864

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.57  E-value=0.0011  Score=53.61  Aligned_cols=137  Identities=15%  Similarity=0.159  Sum_probs=94.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHH
Q 017528          188 IKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHEWVLGWNVRLLAVAYCGIIVTA  267 (370)
Q Consensus       188 ~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~  267 (370)
                      ....+.+++++.+..+..-...++.+..++|..-.++.+..+.+.+..+.++.+.. ..+.......|+..  +|.+..+
T Consensus         4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~-~~~a~~~~~pwW~~--~GG~lGa   80 (150)
T COG3238           4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGH-PGLAAVASAPWWAW--IGGLLGA   80 (150)
T ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCC-CchhhccCCchHHH--Hccchhh
Confidence            35678889999999999999999999888889999999999998888887774432 22322222233322  2223333


Q ss_pred             HHHHHHHHHHhccCce-eEEeccchHHHHHHHHHHHHhc----ccchhhhHHHHHHHHHHHHHHh
Q 017528          268 LTYYLQAWVIEKKGPV-FLAMSTPLALIFTTIASVFLLC----EIITLGRILGGLLLIGGLYAVL  327 (370)
Q Consensus       268 ~~~~~~~~a~~~~~~~-~~s~~~~~~pi~~~~~~~~~~~----e~~~~~~~iG~~li~~g~~l~~  327 (370)
                      +-...-.....+.+++ .......-+.+.+.+++.+=+.    .+++...++|.+++++|+++..
T Consensus        81 ~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~  145 (150)
T COG3238          81 IFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLAR  145 (150)
T ss_pred             hhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhc
Confidence            3333344555566554 3445566678888888876543    5689999999999999966553

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.51  E-value=0.0018  Score=49.76  Aligned_cols=64  Identities=17%  Similarity=0.137  Sum_probs=57.7

Q ss_pred             HHHHHHHHHHHHHHHhhcChhhHhhhc-cchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhh
Q 017528           83 LIGITFSLDLYGIALIYTSATLAAATT-NCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATL  152 (370)
Q Consensus        83 ~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li  152 (370)
                      +.++..++++...++++.|.+.+-.+. ....+.+.+.+.+++||+++..      +++++.+.+.|++.+
T Consensus        42 ~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~------~~~gi~lIi~GVi~l  106 (109)
T PRK10650         42 LAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRK------GWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHh
Confidence            344478888999999999999998877 7889999999999999999999      999999999999886

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=97.47  E-value=0.0004  Score=53.38  Aligned_cols=110  Identities=16%  Similarity=0.166  Sum_probs=77.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017528           17 ILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFSLDLYGIA   96 (370)
Q Consensus        17 l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a   96 (370)
                      ++..++||.++.+.|...+. .++..-.. |..-....     +           .+.|.+  ...+...-.+...|++.
T Consensus         2 l~Vg~~WG~Tnpfik~g~~~-~~~~~~~~-~~~~~~~~-----L-----------l~n~~y--~ipf~lNq~GSv~f~~~   61 (113)
T PF10639_consen    2 LLVGILWGCTNPFIKRGSSG-LEKVKASL-QLLQEIKF-----L-----------LLNPKY--IIPFLLNQSGSVLFFLL   61 (113)
T ss_pred             eeehHHhcCchHHHHHHHhh-cCCccchH-HHHHHHHH-----H-----------HHhHHH--HHHHHHHHHHHHHHHHH
Confidence            35678999999999998874 55444331 21111111     0           011111  12333335677788999


Q ss_pred             HhhcChhhHhhhc-cchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhh
Q 017528           97 LIYTSATLAAATT-NCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATL  152 (370)
Q Consensus        97 l~~~~~~~~~~i~-~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li  152 (370)
                      +...+.+.+.++. ++.=++|++.++++.+|..+++      .++|+.+.+.|+.+.
T Consensus        62 L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~------~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   62 LGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRR------TWLGMALILAGVALC  112 (113)
T ss_pred             HhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchh------HHHHHHHHHcCeeee
Confidence            9999999999997 8888999999988877777777      999999999998764

Many members are annotated as potential transmembrane proteins.

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.46  E-value=0.00063  Score=51.89  Aligned_cols=66  Identities=15%  Similarity=0.127  Sum_probs=59.4

Q ss_pred             HHHHHHHHHHHHHHHhhcChhhHhhhc-cchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhh
Q 017528           83 LIGITFSLDLYGIALIYTSATLAAATT-NCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAF  154 (370)
Q Consensus        83 ~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~  154 (370)
                      +.++..++++...++++.|.+.+-.+. ....+.+.+++.+++||+++..      +++++.+.+.|++.+-.
T Consensus        36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~------~~~gi~lIi~GVv~l~l  102 (105)
T PRK11431         36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPA------RLLSLALIVAGIIGLKL  102 (105)
T ss_pred             HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHhhhc
Confidence            444578889999999999999998887 7999999999999999999999      99999999999998753

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=97.27  E-value=0.0031  Score=57.94  Aligned_cols=142  Identities=18%  Similarity=0.207  Sum_probs=110.3

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHhC---CCChHHHHHHHHHHHHHHHHHHHhhhhcccCCC---CCHHHHHHHHHH
Q 017528            8 DKQRPYLTVILIQAIYAGMFLLSKAAFNG---GMNNFVFIFYRQAFATLFVAPISLAVEWKKAPP---LSFLTFCKIFFL   81 (370)
Q Consensus         8 ~~~~~~l~~l~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~---~~~~~~~~~~~~   81 (370)
                      +...|-++++++++++|.+.++.|.-.++   ..|--.+..+-.++..++++|..+.-..-..++   .+..+...++..
T Consensus       244 ~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~~  323 (416)
T KOG2765|consen  244 RPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVVFN  323 (416)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeeeHh
Confidence            44689999999999999999999986654   255555666666677777775554422222221   233445667888


Q ss_pred             HHHHHHHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhc
Q 017528           82 SLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFY  155 (370)
Q Consensus        82 g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~  155 (370)
                      ++++.+...++|.+|.-.+++-.+++-..+.....++...++-+.+++..      .++|...+++|-+++...
T Consensus       324 ~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~------~iiGsi~Ifv~Fv~vn~~  391 (416)
T KOG2765|consen  324 NLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSAL------YIIGSIPIFVGFVIVNIS  391 (416)
T ss_pred             hHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHhheecc
Confidence            89999999999999999999999999999999999999988866666666      999999999999998864

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.24  E-value=0.00096  Score=50.90  Aligned_cols=65  Identities=18%  Similarity=0.266  Sum_probs=54.4

Q ss_pred             HHHHHHHHHHHHHHHhccCceeEE-eccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHh
Q 017528          263 IIVTALTYYLQAWVIEKKGPVFLA-MSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVL  327 (370)
Q Consensus       263 ~~~~~~~~~~~~~a~~~~~~~~~s-~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~  327 (370)
                      +.+.+.++++...++|+.+.+.+= .-.-+..+.+.+.+++++||++++.+++|++++++|++...
T Consensus        36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~  101 (105)
T PRK11431         36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence            345678888889999988876553 34557888899999999999999999999999999999874

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.14  E-value=0.0014  Score=49.58  Aligned_cols=65  Identities=23%  Similarity=0.374  Sum_probs=53.2

Q ss_pred             HHHHHHHHHHHHHhccCceeE-EeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHhcC
Q 017528          265 VTALTYYLQAWVIEKKGPVFL-AMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLWG  329 (370)
Q Consensus       265 ~~~~~~~~~~~a~~~~~~~~~-s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~  329 (370)
                      +...+|.+...++|+++...+ ++-.-+..+.+.+.++++|+|++++.+++|.+++++|++.....
T Consensus        39 ~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~  104 (106)
T COG2076          39 GYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG  104 (106)
T ss_pred             HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence            356778888888888776543 44566778888999999999999999999999999999987543

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.10  E-value=0.0019  Score=49.63  Aligned_cols=64  Identities=11%  Similarity=0.100  Sum_probs=53.0

Q ss_pred             HHHHHHHHHHHHHHhccCceeEE-eccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHh
Q 017528          264 IVTALTYYLQAWVIEKKGPVFLA-MSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVL  327 (370)
Q Consensus       264 ~~~~~~~~~~~~a~~~~~~~~~s-~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~  327 (370)
                      ...++++++...++|+.+...+= +..-+..+.+.+.+++++||++++.+++|+++++.|++...
T Consensus        43 ~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         43 AAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            34567888888999888876543 34557778889999999999999999999999999999863

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=97.07  E-value=0.002  Score=59.10  Aligned_cols=137  Identities=15%  Similarity=0.162  Sum_probs=109.4

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHh---CCCChHHHHHHHHHHHHHHHH-HHHhhhhcccC-----CCCCHHHHHHHH
Q 017528            9 KQRPYLTVILIQAIYAGMFLLSKAAFN---GGMNNFVFIFYRQAFATLFVA-PISLAVEWKKA-----PPLSFLTFCKIF   79 (370)
Q Consensus         9 ~~~~~l~~l~~~~~~~~~~~~~k~~~~---~~~~~~~~~~~r~~~~~l~l~-~~~~~~~~~~~-----~~~~~~~~~~~~   79 (370)
                      +..|...++.+.+..+...++.|..+.   ..+|++.......-++..+++ |+....+....     ...+...+.. .
T Consensus       161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~-~  239 (316)
T KOG1441|consen  161 NLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLIL-L  239 (316)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHH-H
Confidence            468999999999999999999999884   248999999998888888888 87766443222     1223333333 3


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhh
Q 017528           80 FLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLA  153 (370)
Q Consensus        80 ~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~  153 (370)
                      ...++. .+.+...|..+..++|-.-++....--+++.+.++++++|+++..      +..|.++++.|+.+=.
T Consensus       240 ~~sv~~-f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~------n~~G~~iai~Gv~~Y~  306 (316)
T KOG1441|consen  240 LNSVLA-FLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFL------NALGYAIAILGVFLYS  306 (316)
T ss_pred             HHHHHH-HHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchh------hHHHHHHHHHHHHHHH
Confidence            333666 666778888999999999999888888888999999999999999      9999999999998854

>PRK13499 rhamnose-proton symporter; Provisional

Probab=96.96  E-value=0.035  Score=51.67  Aligned_cols=145  Identities=9%  Similarity=0.009  Sum_probs=96.6

Q ss_pred             ccchhHHHHHHHHHHHHHHH-------HHHHHHHhCCCChHHHHHHHHH---HHHHHHH-HHHhhh--hcccC-----CC
Q 017528            8 DKQRPYLTVILIQAIYAGMF-------LLSKAAFNGGMNNFVFIFYRQA---FATLFVA-PISLAV--EWKKA-----PP   69 (370)
Q Consensus         8 ~~~~~~l~~l~~~~~~~~~~-------~~~k~~~~~~~~~~~~~~~r~~---~~~l~l~-~~~~~~--~~~~~-----~~   69 (370)
                      +..+|++.++++.+..+...       ...+...+.|.++.....-.+.   .+..+.- .++.++  ++++.     ++
T Consensus       171 ~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~~  250 (345)
T PRK13499        171 NLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKNKDLSLKADFS  250 (345)
T ss_pred             chHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchhcc
Confidence            34789999999999999988       6666544456777666555554   3433332 222321  11111     11


Q ss_pred             CC----HHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHhh---hc-cchhHHHHHHHHHHhhccccccccCccchhhh
Q 017528           70 LS----FLTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAA---TT-NCLPAITFFLAVLLRMEVLKLKTVPGVAKLVG  141 (370)
Q Consensus        70 ~~----~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~---i~-~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~  141 (370)
                      .+    .+......+.|++. +..+.+|..+-+..+.+....   +. ++..++..+-+. ++||+-+..+|.-+.-++|
T Consensus       251 ~~~~~~~~n~l~~~l~G~~W-~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G  328 (345)
T PRK13499        251 LAKPLLITNVLLSALAGVMW-YLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLG  328 (345)
T ss_pred             ccchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHH
Confidence            12    23333346777777 788888888888886655544   55 666677777777 5999988777788888999


Q ss_pred             HHHHHhhhhhhhh
Q 017528          142 ILICIGGAATLAF  154 (370)
Q Consensus       142 i~l~~~Gv~li~~  154 (370)
                      +++.++|.+++..
T Consensus       329 ~vliI~g~~lig~  341 (345)
T PRK13499        329 CVVIILAANIVGL  341 (345)
T ss_pred             HHHHHHHHHHHhh
Confidence            9999999998875

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.94  E-value=0.0024  Score=47.74  Aligned_cols=57  Identities=23%  Similarity=0.201  Sum_probs=35.8

Q ss_pred             HHHHHHHHHHHHHHHhhcChhhHhhhc-cchhHHHHHHHHHHhhccccccccCccchhhhHHHH
Q 017528           83 LIGITFSLDLYGIALIYTSATLAAATT-NCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILIC  145 (370)
Q Consensus        83 ~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~  145 (370)
                      +.+++.++.++..++++.|.+.+-.+. .+..+.+.+.+.+++||+++..      ++.|+.+.
T Consensus        36 ~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~------~~~gi~lI   93 (93)
T PF00893_consen   36 VVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLS------KWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHhheeeC
Confidence            345578889999999999999998776 7999999999999999999999      99998763

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=96.94  E-value=0.0017  Score=57.78  Aligned_cols=76  Identities=24%  Similarity=0.285  Sum_probs=65.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHhcCcc
Q 017528          255 LLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLWGKS  331 (370)
Q Consensus       255 ~~~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~  331 (370)
                      ......=++ ...+...+.+.++++.+|+...++..+..+++.++++++++.+++..||++..++++|+.+......
T Consensus        17 ~~~~~vPA~-lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~   92 (244)
T PF04142_consen   17 TLKLAVPAL-LYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSS   92 (244)
T ss_pred             HHHHHHHHH-HHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCc
Confidence            334444444 3667888899999999999999999999999999999999999999999999999999999866443

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=96.91  E-value=0.0011  Score=58.89  Aligned_cols=132  Identities=15%  Similarity=0.074  Sum_probs=78.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHH
Q 017528          190 GCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHEWVLGWNVRLLAVAYCGIIVTALT  269 (370)
Q Consensus       190 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~  269 (370)
                      |.+.+++|+++++-..+=.|+....  |++...++++....+..+...++.+.+  .+   .     .+..+|...-+.+
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~~~g--Dg~~fQw~~~~~i~~~g~~v~~~~~~p--~f---~-----p~amlgG~lW~~g   68 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKFDTG--DGFFFQWVMCSGIFLVGLVVNLILGFP--PF---Y-----PWAMLGGALWATG   68 (254)
T ss_pred             CchhHHHHHHHhcccceeeEeccCC--CcHHHHHHHHHHHHHHHHHHHHhcCCC--cc---e-----eHHHhhhhhhhcC
Confidence            4567788999999888888776433  667777777777777776666554331  11   0     1111111112223


Q ss_pred             HHHHHHHHhccCceeEEec-cchHHHHHHHHHHH-Hhcccc-----hhhhHHHHHHHHHHHHHHhcCcchh
Q 017528          270 YYLQAWVIEKKGPVFLAMS-TPLALIFTTIASVF-LLCEII-----TLGRILGGLLLIGGLYAVLWGKSKE  333 (370)
Q Consensus       270 ~~~~~~a~~~~~~~~~s~~-~~~~pi~~~~~~~~-~~~e~~-----~~~~~iG~~li~~g~~l~~~~~~~~  333 (370)
                      ..+-.-.++.++-...-.+ ...+.+.+...+.+ +||+.+     .+..++|.+++++|..++..-|.++
T Consensus        69 N~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~  139 (254)
T PF07857_consen   69 NILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEE  139 (254)
T ss_pred             ceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence            3333333444443333222 33466777777655 455433     5789999999999999987765544

The region concerned is approximately 280 residues long.

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=96.83  E-value=0.013  Score=52.47  Aligned_cols=139  Identities=11%  Similarity=0.074  Sum_probs=114.1

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHHHHHHHHhhhhcccCC-----CCCHHHHHHHHHH
Q 017528            8 DKQRPYLTVILIQAIYAGMFLLSKAAFNG-GMNNFVFIFYRQAFATLFVAPISLAVEWKKAP-----PLSFLTFCKIFFL   81 (370)
Q Consensus         8 ~~~~~~l~~l~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~   81 (370)
                      ++..|++++....++=|..+.....+.+. ++++..+.+.-.++.++......+.... .++     +..++.++-+++.
T Consensus       169 ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~-~~~av~F~~~hp~~~~Di~l~  247 (327)
T KOG1581|consen  169 NSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGH-LLPAVSFIKEHPDVAFDILLY  247 (327)
T ss_pred             CchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCC-CchHHHHHHcChhHHHHHHHH
Confidence            44578899988888888888888877764 6889999999998888887776544222 121     2356778888999


Q ss_pred             HHHHHHHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhh
Q 017528           82 SLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAF  154 (370)
Q Consensus        82 g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~  154 (370)
                      ..++ ..++.+.++-++.-++-.-+.+..+-=+++.+++.+.++.+++..      +|.|+.+.+.|+.+=..
T Consensus       248 s~~g-avGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~------q~~g~~iVFg~i~l~~~  313 (327)
T KOG1581|consen  248 STCG-AVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSE------QWLGVLIVFGGIFLEIL  313 (327)
T ss_pred             HHhh-hhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchh------hccCeeeehHHHHHHHH
Confidence            9999 888889999999888888888888999999999999999999999      99999999999877554

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.80  E-value=0.0021  Score=48.11  Aligned_cols=56  Identities=23%  Similarity=0.341  Sum_probs=34.7

Q ss_pred             HHHHHHHHHHHHHHhccCceeEEec-cchHHHHHHHHHHHHhcccchhhhHHHHHHH
Q 017528          264 IVTALTYYLQAWVIEKKGPVFLAMS-TPLALIFTTIASVFLLCEIITLGRILGGLLL  319 (370)
Q Consensus       264 ~~~~~~~~~~~~a~~~~~~~~~s~~-~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li  319 (370)
                      .+.+.++.++.+++|+.+.+.+=.+ .-+..+.+.+.+++++||++++.+++|+++|
T Consensus        37 ~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   37 VGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            3567888999999999998888544 5589999999999999999999999999876

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=96.79  E-value=0.021  Score=46.25  Aligned_cols=141  Identities=11%  Similarity=-0.017  Sum_probs=88.4

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHH
Q 017528            9 KQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITF   88 (370)
Q Consensus         9 ~~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   88 (370)
                      ....++..+.+..+-.....+...+.+..-+|....+..+..+.+.+..+.+.+.+.......++.-+|.+.-|++| +.
T Consensus         3 ~~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lG-a~   81 (150)
T COG3238           3 MYLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLG-AI   81 (150)
T ss_pred             cHHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchh-hh
Confidence            34667778888888888887777777762359999999999999998888877444333333344455566667666 54


Q ss_pred             HHHHHHHHHhhcChhhHhhhc-cchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhh
Q 017528           89 SLDLYGIALIYTSATLAAATT-NCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATL  152 (370)
Q Consensus        89 ~~~~~~~al~~~~~~~~~~i~-~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li  152 (370)
                      .-+.-........++....+. .-+-+...++..+=..  =-.+++++..+++|+++.++|+.++
T Consensus        82 ~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~--g~~~~~~~~~r~lgi~L~l~gil~~  144 (150)
T COG3238          82 FVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWF--GVPKRPLNLPRILGILLVLAGILLA  144 (150)
T ss_pred             hhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhccc--CCCcCCCCHHHHHHHHHHHHHHHHh
Confidence            444444555555555554433 3344444444432211  0112455556999999999995554

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=96.73  E-value=0.017  Score=51.33  Aligned_cols=193  Identities=10%  Similarity=0.037  Sum_probs=116.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 017528           12 PYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFSLD   91 (370)
Q Consensus        12 ~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   91 (370)
                      |++..+++++.+|++++-.|..- . .|++.+-++......+.-+.+.+.++   .+    +-+++.++-|.+. +.++.
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~~-~-gDg~~fQw~~~~~i~~~g~~v~~~~~---~p----~f~p~amlgG~lW-~~gN~   70 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKFD-T-GDGFFFQWVMCSGIFLVGLVVNLILG---FP----PFYPWAMLGGALW-ATGNI   70 (254)
T ss_pred             CchhHHHHHHHhcccceeeEecc-C-CCcHHHHHHHHHHHHHHHHHHHHhcC---CC----cceeHHHhhhhhh-hcCce
Confidence            56788999999999999999543 3 57777776666555555555444321   22    2356677778887 88888


Q ss_pred             HHHHHHhhcChhhHhhhccchhHH-HHHHHHH-HhhccccccccCccchhhhHHHHHhhhhhhhhccCCccc----cccc
Q 017528           92 LYGIALIYTSATLAAATTNCLPAI-TFFLAVL-LRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLR----LLCH  165 (370)
Q Consensus        92 ~~~~al~~~~~~~~~~i~~~~pi~-~~ll~~l-~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~----~~~~  165 (370)
                      +-.-.++....+....+.++.-++ .-..+.+ +++++.... +-....++|++++++|..+..+.+.+...    .+++
T Consensus        71 ~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~-~~~~Ln~~G~~l~~~~~~~f~fik~~~~~~~~~~~~~  149 (254)
T PF07857_consen   71 LVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVP-SSPWLNYIGVALVLVSGIIFSFIKSEEKEPKKSSEET  149 (254)
T ss_pred             eehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceecccccccc-chhHHHHHHHHHHHHHHHheeeecCCCCCcccccccc
Confidence            889999999999999988653333 3333333 344332221 11233778888888888877664332211    0000


Q ss_pred             cccccC-CCCccc---ccccC------CCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 017528          166 HHIFGH-HNSQQI---HGHVS------SGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSY  215 (370)
Q Consensus       166 ~~~~~~-~~~~~~---~~~~~------~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~  215 (370)
                      +...++ .+.+++   +.+++      .......|..+++++++.|+...+=..+..++.
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~S~vd~l~~~~~RivG~~LAv~aGvlyGs~fvPv~Yi~~~~  209 (254)
T PF07857_consen  150 PLSIEDVIEIEDDSENSEDSSWVDELSPRKKRIVGIILAVFAGVLYGSNFVPVIYIQDHP  209 (254)
T ss_pred             ccccccccccccccccccccccccccccccchhHhHHHHHHHHHHHhcccchHHHHHhCc
Confidence            000000 000000   00000      111367899999999999999887777766553

The region concerned is approximately 280 residues long.

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=96.66  E-value=0.015  Score=44.71  Aligned_cols=109  Identities=14%  Similarity=0.062  Sum_probs=75.3

Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHHHHHHHH
Q 017528          196 SSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHEWVLGWNVRLLAVAYCGIIVTALTYYLQAW  275 (370)
Q Consensus       196 ~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~  275 (370)
                      +.+++|+..+-+.||..+..++.... . +..-....     ++.          .++.+.     ....+..+-..|++
T Consensus         3 ~Vg~~WG~Tnpfik~g~~~~~~~~~~-~-~~~~~~~~-----Ll~----------n~~y~i-----pf~lNq~GSv~f~~   60 (113)
T PF10639_consen    3 LVGILWGCTNPFIKRGSSGLEKVKAS-L-QLLQEIKF-----LLL----------NPKYII-----PFLLNQSGSVLFFL   60 (113)
T ss_pred             eehHHhcCchHHHHHHHhhcCCccch-H-HHHHHHHH-----HHH----------hHHHHH-----HHHHHHHHHHHHHH
Confidence            45789999999999988765532222 1 21111111     010          111111     22334556667889


Q ss_pred             HHhccCceeEEec-cchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHH
Q 017528          276 VIEKKGPVFLAMS-TPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAV  326 (370)
Q Consensus       276 a~~~~~~~~~s~~-~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~  326 (370)
                      .+.+.+-+.+.++ ..+.-+++++.++++.+|..+...++|+++++.|+.+.
T Consensus        61 ~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   61 LLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            9999999999998 58999999999998888888999999999999998753

Many members are annotated as potential transmembrane proteins.

>TIGR00803 nst UDP-galactose transporter

Probab=96.18  E-value=0.027  Score=49.40  Aligned_cols=59  Identities=12%  Similarity=-0.021  Sum_probs=53.8

Q ss_pred             HHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhh
Q 017528           87 TFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAAT  151 (370)
Q Consensus        87 ~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~l  151 (370)
                      ..+..+..+.++|.++...+....+.++++.+++.++++|+++..      ++.|+.+.+.|+.+
T Consensus       163 a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~------~~~g~~lV~~~~~l  221 (222)
T TIGR00803       163 VGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISST------FYLGAILVFLATFL  221 (222)
T ss_pred             HhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHH------HHHHHHHHHeeeEe
Confidence            566677889999999999999999999999999999999999999      99999999988753

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=96.09  E-value=0.0029  Score=54.88  Aligned_cols=132  Identities=14%  Similarity=0.060  Sum_probs=91.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHH
Q 017528          190 GCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHEWVLGWNVRLLAVAYCGIIVTALT  269 (370)
Q Consensus       190 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~  269 (370)
                      ..+++++=++.|+..-....+.   ...|.+.+.-..+.+.++.+.+.++..++.      ....+..-+..|. .=.++
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~---GG~p~qQ~lGtT~GALifaiiv~~~~~p~~------T~~~~iv~~isG~-~Ws~G   72 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKF---GGKPYQQTLGTTLGALIFAIIVFLFVSPEL------TLTIFIVGFISGA-FWSFG   72 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeec---CCChhHhhhhccHHHHHHHHHHheeecCcc------chhhHHHHHHhhh-Hhhhh
Confidence            4678888899998876665433   235677777777777777766655522211      1122222233333 35578


Q ss_pred             HHHHHHHHhccCceeEEecc-chHHHHHHHHHHHHhcccchhhhHH----HHHHHHHHHHHHhcCcc
Q 017528          270 YYLQAWVIEKKGPVFLAMST-PLALIFTTIASVFLLCEIITLGRIL----GGLLLIGGLYAVLWGKS  331 (370)
Q Consensus       270 ~~~~~~a~~~~~~~~~s~~~-~~~pi~~~~~~~~~~~e~~~~~~~i----G~~li~~g~~l~~~~~~  331 (370)
                      +...+++++..+.+++.++. -.+-+-+.++++++|||-.++.+.+    ..++++.|+++..+.++
T Consensus        73 Q~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~  139 (288)
T COG4975          73 QANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDR  139 (288)
T ss_pred             hhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecc
Confidence            88999999999999999875 4677888999999999999877654    56677788877666544

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=96.01  E-value=0.34  Score=44.75  Aligned_cols=138  Identities=15%  Similarity=0.105  Sum_probs=90.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCC---CchhHHHHHHHHHHHHHHHHHHHhcCC--------CcccccccchhhHHHH
Q 017528          191 CFIMLSSNTSFGLWLVLQGFVMKSYP---SKLLFTTLQCFLSSIQSFAIAIALERD--------PHEWVLGWNVRLLAVA  259 (370)
Q Consensus       191 ~~~~l~a~~~~a~~~v~~~~~~~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~--------~~~~~~~~~~~~~~l~  259 (370)
                      .+..+...+-++......|+..++.+   .|.+..+..-+.-.+++....+..++.        ........+.+..-+.
T Consensus        17 ~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~   96 (345)
T KOG2234|consen   17 YLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVS   96 (345)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHH
Confidence            33444444555555556665544432   334555555556666666655544311        1111111221222222


Q ss_pred             HHHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHhcC
Q 017528          260 YCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLWG  329 (370)
Q Consensus       260 ~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~  329 (370)
                      .=+. ..++...+++.++.+.+|++..+...+..+.+.++..++++++++.+||...++...|+.+.++.
T Consensus        97 vPa~-iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~  165 (345)
T KOG2234|consen   97 VPAL-IYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLP  165 (345)
T ss_pred             HHHH-HHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhcc
Confidence            2222 35566678999999999999999999999999999999999999999999999999999998743

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=95.77  E-value=0.087  Score=45.56  Aligned_cols=137  Identities=13%  Similarity=0.064  Sum_probs=101.8

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHHHHHHHHhhhhcccCC-----CCCHHHHHHHHHHHH
Q 017528           10 QRPYLTVILIQAIYAGMFLLSKAAFNG-GMNNFVFIFYRQAFATLFVAPISLAVEWKKAP-----PLSFLTFCKIFFLSL   83 (370)
Q Consensus        10 ~~~~l~~l~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~   83 (370)
                      ..|.++++++..+-|...........+ .-+...+.+.-.+-+.+.+..-+++... .|.     .-.+..|+.+...++
T Consensus       171 g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGE-lweF~yF~~RhP~~~~~l~l~ai  249 (337)
T KOG1580|consen  171 GFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGE-LWEFFYFVQRHPYVFWDLTLLAI  249 (337)
T ss_pred             chHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhh-HHHHHHHHHhccHHHHHHHHHHH
Confidence            357788888888888888877665543 1233444555555555555544443221 110     012455777888888


Q ss_pred             HHHHHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhh
Q 017528           84 IGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAF  154 (370)
Q Consensus        84 ~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~  154 (370)
                      ++ ++++.+.+.-+.+-+|-..+++..+--+|+.+.+.++++..++.+      ||+|..+.+.|...=..
T Consensus       250 ~s-~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~r------QwlgtvlVF~aL~~D~~  313 (337)
T KOG1580|consen  250 AS-CLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGR------QWLGTVLVFSALTADVV  313 (337)
T ss_pred             HH-HhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHH------HHHHHHHHHHHhhhHhh
Confidence            88 999999999999999999999999999999999999999999999      99999999998877554

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=95.65  E-value=0.13  Score=46.72  Aligned_cols=139  Identities=13%  Similarity=0.122  Sum_probs=109.9

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHHHHHHHHhhhhccc-----C-CCCCHHHHHHHHHH
Q 017528            9 KQRPYLTVILIQAIYAGMFLLSKAAFNG-GMNNFVFIFYRQAFATLFVAPISLAVEWKK-----A-PPLSFLTFCKIFFL   81 (370)
Q Consensus         9 ~~~~~l~~l~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~-----~-~~~~~~~~~~~~~~   81 (370)
                      +..|+.+++...+.-+...+..|...+. +.+-..+.++..++..+.+.......+..+     . ...+...+..+.+.
T Consensus       155 ~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lS  234 (314)
T KOG1444|consen  155 NLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLS  234 (314)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHH
Confidence            4468999999999999999999998775 577888999999999888887765533211     0 11234557778888


Q ss_pred             HHHHHHHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhh
Q 017528           82 SLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAF  154 (370)
Q Consensus        82 g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~  154 (370)
                      ++++ .+-+++-+++.+..++...++.....-..+.+...++.+++.++.      ..+|+.+++.|-++=.+
T Consensus       235 cv~g-f~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~------n~~gll~~~~ggv~Y~~  300 (314)
T KOG1444|consen  235 CVMG-FGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFL------NVIGLLVGFFGGVLYSY  300 (314)
T ss_pred             HHHH-HHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechh------hhHHHHHHhhhhhHHhh
Confidence            8888 556668888999999888888887777788888888888999999      99999999999887554

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=95.30  E-value=0.074  Score=45.61  Aligned_cols=137  Identities=15%  Similarity=0.088  Sum_probs=107.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHHHHHHHHhhhhcccC----CCCCHHHHHHHHHHHHHH
Q 017528           11 RPYLTVILIQAIYAGMFLLSKAAFNG-GMNNFVFIFYRQAFATLFVAPISLAVEWKKA----PPLSFLTFCKIFFLSLIG   85 (370)
Q Consensus        11 ~~~l~~l~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~   85 (370)
                      .|++++...++.-+..-...|.-.+- +.......++..+.+..+++.+....+.+..    ..++.....++++.|++.
T Consensus       155 ~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~s  234 (309)
T COG5070         155 PGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCS  234 (309)
T ss_pred             CceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHH
Confidence            46666777776666666666654432 4778899999999999999888776554433    234567778889999988


Q ss_pred             HHHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhh
Q 017528           86 ITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAF  154 (370)
Q Consensus        86 ~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~  154 (370)
                       ++..++-.|.++-++....+.+-.+.-.-.++-+.++++|+.++.      .+.++++++...++-..
T Consensus       235 -vgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~------si~sillGflsg~iYav  296 (309)
T COG5070         235 -VGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFL------SIFSILLGFLSGAIYAV  296 (309)
T ss_pred             -hhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHH------HHHHHHHHHHHHHHHHH
Confidence             666678889999999999999999999999999999999999999      99999998877666543

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=95.23  E-value=0.0046  Score=55.82  Aligned_cols=126  Identities=17%  Similarity=0.165  Sum_probs=93.9

Q ss_pred             CcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHH
Q 017528          184 GKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHEWVLGWNVRLLAVAYCGI  263 (370)
Q Consensus       184 ~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~  263 (370)
                      ..++..|..+++.+.+..+...++.|+..++...    .              ..-.....  ........|+    .|+
T Consensus        16 ~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~----~--------------~~ra~~gg--~~yl~~~~Ww----~G~   71 (335)
T KOG2922|consen   16 SSDNIIGLVLAISSSIFIGSSFILKKKGLKRAGA----S--------------GLRAGEGG--YGYLKEPLWW----AGM   71 (335)
T ss_pred             ccCceeeeeehhhccEEEeeehhhhHHHHHHHhh----h--------------cccccCCC--cchhhhHHHH----HHH
Confidence            3445689999999999999999998887665321    0              00001111  1111111222    367


Q ss_pred             HHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHhcCcchh
Q 017528          264 IVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLWGKSKE  333 (370)
Q Consensus       264 ~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~~~  333 (370)
                      +..+++-.+-+.+....+++.+++++.++.+++.+++..+++|.++....+|+++.++|..+.....+++
T Consensus        72 ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e  141 (335)
T KOG2922|consen   72 LTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKE  141 (335)
T ss_pred             HHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcc
Confidence            7778888888899999999999999999999999999999999999999999999999988876554443

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=91.55  E-value=0.086  Score=44.31  Aligned_cols=61  Identities=20%  Similarity=0.270  Sum_probs=56.2

Q ss_pred             HHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHhcC
Q 017528          269 TYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLWG  329 (370)
Q Consensus       269 ~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~  329 (370)
                      +.+.|..++++++|+.++.+..-+--+..+++++++|+++...+++..++.+.|++...+.
T Consensus        66 aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~  126 (290)
T KOG4314|consen   66 ANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYA  126 (290)
T ss_pred             CCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEec
Confidence            4567889999999999999999999999999999999999999999999999999887653

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=91.46  E-value=1.7  Score=39.39  Aligned_cols=122  Identities=20%  Similarity=0.280  Sum_probs=84.8

Q ss_pred             HHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhcCC-Cccc-ccccchhhHHHHHHHHHHHHHHHHHHHHHHhccCceeE
Q 017528          208 QGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERD-PHEW-VLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFL  285 (370)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~-~~~~~~~~~~l~~~g~~~~~~~~~~~~~a~~~~~~~~~  285 (370)
                      .+...++.+-|+..+..+...-.......-...+.. +... ...+...+-.++-.|+ +++.-..+-++++++++.+..
T Consensus        35 ~~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtal-ata~DIGLSN~sl~yVtlSlY  113 (349)
T KOG1443|consen   35 FKWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTAL-ATALDIGLSNWSLEYVTLSLY  113 (349)
T ss_pred             hhhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhh-hhhcccccccceeeeeeeeee
Confidence            333344455567777777766655554433333321 2211 1112222333445554 577778889999999999999


Q ss_pred             EeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHhcCc
Q 017528          286 AMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLWGK  330 (370)
Q Consensus       286 s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~  330 (370)
                      ++.-+..++|..+++.++-=|.+++....=..+|-+|+++.+++.
T Consensus       114 TM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~Ks  158 (349)
T KOG1443|consen  114 TMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKS  158 (349)
T ss_pred             eeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecc
Confidence            999999999999999999999999999888888889988887654

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=91.19  E-value=1.6  Score=40.40  Aligned_cols=140  Identities=14%  Similarity=-0.047  Sum_probs=84.1

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHH--hcCC-CcccccccchhhHHHHHHH
Q 017528          186 TWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIA--LERD-PHEWVLGWNVRLLAVAYCG  262 (370)
Q Consensus       186 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~-~~~~~~~~~~~~~~l~~~g  262 (370)
                      +...|+++-.+++++.+.+.+=.||..+-  + .+.......+-.-+..|....  .-++ .+.....+...+....+.|
T Consensus         4 ~ii~Gii~h~iGg~~~~sfy~P~kkvk~W--s-WEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G   80 (344)
T PF06379_consen    4 AIILGIIFHAIGGFASGSFYVPFKKVKGW--S-WESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFG   80 (344)
T ss_pred             hHHHHHHHHHHHHHHhhhhccchhhcCCc--c-HHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHH
Confidence            45789999999999999999998886543  3 333333333333333343322  2222 1112222333455555566


Q ss_pred             HHHHHHHHHHHHHHHhccCceeEE-eccchHHHHHHHHHHHHhcc-------cchhhhHHHHHHHHHHHHHHhcC
Q 017528          263 IIVTALTYYLQAWVIEKKGPVFLA-MSTPLALIFTTIASVFLLCE-------IITLGRILGGLLLIGGLYAVLWG  329 (370)
Q Consensus       263 ~~~~~~~~~~~~~a~~~~~~~~~s-~~~~~~pi~~~~~~~~~~~e-------~~~~~~~iG~~li~~g~~l~~~~  329 (370)
                      ++ =+++-..|..++|+++.+... +..-+.-+++.++--++.|+       +-....++|.++.++|+.+..+.
T Consensus        81 ~l-WGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~A  154 (344)
T PF06379_consen   81 VL-WGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKA  154 (344)
T ss_pred             HH-HhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHH
Confidence            64 567777888999999875443 33444555555554444332       22356788999999999988654

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=91.16  E-value=2  Score=38.28  Aligned_cols=140  Identities=15%  Similarity=0.089  Sum_probs=98.0

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHh-CCCChHHHHHHHHHHHHHHHHHHHhhhhccc--C---CCCCHHHHHHHHHHHH
Q 017528           10 QRPYLTVILIQAIYAGMFLLSKAAFN-GGMNNFVFIFYRQAFATLFVAPISLAVEWKK--A---PPLSFLTFCKIFFLSL   83 (370)
Q Consensus        10 ~~~~l~~l~~~~~~~~~~~~~k~~~~-~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~--~---~~~~~~~~~~~~~~g~   83 (370)
                      ..|+.++-.+-+.-+...-+.....+ ++-+..+++++.+.+++++++..+.....-.  +   .+-+++.+...++.+.
T Consensus       189 ~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~  268 (367)
T KOG1582|consen  189 LIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSL  268 (367)
T ss_pred             eeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHH
Confidence            45666666666665555444444443 3467789999999999999887766532211  1   1224566777777776


Q ss_pred             HHHHHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhcc
Q 017528           84 IGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYN  156 (370)
Q Consensus        84 ~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~  156 (370)
                      .+ .++...-..=++.-++..++.+...--..|.+++++++..+++..      ...+.++.+.|+++=..++
T Consensus       269 ~g-ylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~q------y~~~gllv~lgI~Ln~ysk  334 (367)
T KOG1582|consen  269 AG-YLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQ------YVWSGLLVVLGIYLNMYSK  334 (367)
T ss_pred             Hh-HhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHH------HhhhhHHHHHHHHhhcccC
Confidence            66 555544444455567778888888888999999999999999998      8888999999999877643

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=90.39  E-value=4.6  Score=36.30  Aligned_cols=138  Identities=16%  Similarity=0.219  Sum_probs=92.4

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHH-hCCCChHHHHHHHHHHHHHHHHHHHhhhh----ccc---CCCCCHHHHHHH--
Q 017528            9 KQRPYLTVILIQAIYAGMFLLSKAAF-NGGMNNFVFIFYRQAFATLFVAPISLAVE----WKK---APPLSFLTFCKI--   78 (370)
Q Consensus         9 ~~~~~l~~l~~~~~~~~~~~~~k~~~-~~~~~~~~~~~~r~~~~~l~l~~~~~~~~----~~~---~~~~~~~~~~~~--   78 (370)
                      -..|.++.+.+.++.+...++=...+ +++.+|.+.+.+...++.+++..+.....    .+.   .++-.+.+|...  
T Consensus       174 iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~~~~  253 (372)
T KOG3912|consen  174 IITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGDAFA  253 (372)
T ss_pred             chhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHHHHH
Confidence            35689999999999999998865544 45799999999999999666544433211    101   112223333321  


Q ss_pred             -------HHHHHHHHHHHHHHHHH----HHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHh
Q 017528           79 -------FFLSLIGITFSLDLYGI----ALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIG  147 (370)
Q Consensus        79 -------~~~g~~~~~~~~~~~~~----al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~  147 (370)
                             +...+.+...+..+|++    --++.+++.=.++-.+-..+..+++.....|+++..      ++.|.++.+.
T Consensus       254 ~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~ll------qilGFliLi~  327 (372)
T KOG3912|consen  254 ALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLL------QILGFLILIM  327 (372)
T ss_pred             HhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHH------HHHHHHHHHH
Confidence                   22222222222222222    234566777777778889999999999999999999      9999999999


Q ss_pred             hhhhh
Q 017528          148 GAATL  152 (370)
Q Consensus       148 Gv~li  152 (370)
                      |+.+-
T Consensus       328 Gi~lY  332 (372)
T KOG3912|consen  328 GIILY  332 (372)
T ss_pred             HHHHH
Confidence            98773

>KOG4831 consensus Unnamed protein [Function unknown]

Probab=88.00  E-value=0.93  Score=34.00  Aligned_cols=111  Identities=17%  Similarity=0.153  Sum_probs=69.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCCh------HHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHH
Q 017528           15 TVILIQAIYAGMFLLSKAAFNGGMNN------FVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITF   88 (370)
Q Consensus        15 ~~l~~~~~~~~~~~~~k~~~~~~~~~------~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   88 (370)
                      -++...++||.++.+.|.... |.+.      -...++|-.-..                ..+++.+. -+.+-    -.
T Consensus         7 ~lvaVgllWG~Tnplirrgs~-g~~~v~~~~~k~~~~lqe~~tl----------------~l~w~Y~i-PFllN----qc   64 (125)
T KOG4831|consen    7 KLVAVGLLWGATNPLIRRGSL-GWDKVKSSSRKIMIALQEMKTL----------------FLNWEYLI-PFLLN----QC   64 (125)
T ss_pred             HHHHHHHHHccccHHHHHHHh-hHhhccCchHHHHHHHHHHHHH----------------HHhHHHHH-HHHHH----Hh
Confidence            456778899999999998765 2331      122222211110                01122222 22222    23


Q ss_pred             HHHHHHHHHhhcChhhHhhhc-cchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhh
Q 017528           89 SLDLYGIALIYTSATLAAATT-NCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLA  153 (370)
Q Consensus        89 ~~~~~~~al~~~~~~~~~~i~-~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~  153 (370)
                      +..+||.-++..+.+.+..+. ++.-.|+++.+..+ +|+...+     ..+.|..+.++|+.+.+
T Consensus        65 gSaly~~tLa~a~islavpv~nsltfafta~~G~~L-GE~~~g~-----~a~lGt~liv~Gi~Lci  124 (125)
T KOG4831|consen   65 GSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKAL-GEETQGG-----LALLGTSLIVFGIWLCI  124 (125)
T ss_pred             hHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHh-ccccccc-----eeehhhhHHhhhhhhee
Confidence            455778999999999999888 66778888888765 5555444     27889999999987754

>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine

Probab=87.61  E-value=0.75  Score=41.56  Aligned_cols=111  Identities=9%  Similarity=0.044  Sum_probs=71.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcc------cC-------CCCCHHHHHHHHHHH
Q 017528           16 VILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWK------KA-------PPLSFLTFCKIFFLS   82 (370)
Q Consensus        16 ~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~------~~-------~~~~~~~~~~~~~~g   82 (370)
                      |+++.++||++....|++.+++--| +..++-+.++.++..+++-+....      ..       .+.++......+.-|
T Consensus         1 M~itmlcwGSW~nt~kL~~r~gR~~-qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aGG   79 (336)
T PF07168_consen    1 MVITMLCWGSWPNTQKLAERRGRLP-QHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAGG   79 (336)
T ss_pred             CeeehhhhcChHHHHHHHHhcCCcc-ceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHhh
Confidence            3567899999999999988763322 346666666666555444332111      11       123556666667777


Q ss_pred             HHHHHHHHHHHHHHHhhcChhhHhhhc-cchhHHHHHHHHHHhhcccc
Q 017528           83 LIGITFSLDLYGIALIYTSATLAAATT-NCLPAITFFLAVLLRMEVLK  129 (370)
Q Consensus        83 ~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~pi~~~ll~~l~~~e~~~  129 (370)
                      ++. .+++.+.-+|+.+...+.+-++. .+.-++..++.++. ..|.+
T Consensus        80 vvf-nlgNillq~aia~aGmSVafpvg~glalVlGv~~NYfl-d~~~n  125 (336)
T PF07168_consen   80 VVF-NLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYFL-DPKIN  125 (336)
T ss_pred             Hhh-hhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeeec-cCCCC
Confidence            766 78888999999999988888777 55555555555543 44444

Transport is dependent on glucose and a proton gradient [].

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=85.49  E-value=0.86  Score=40.58  Aligned_cols=139  Identities=15%  Similarity=0.082  Sum_probs=93.2

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHHHHHHHHhhhhcc----cCCCC-CHHHHHHHHHHH
Q 017528            9 KQRPYLTVILIQAIYAGMFLLSKAAFNG-GMNNFVFIFYRQAFATLFVAPISLAVEWK----KAPPL-SFLTFCKIFFLS   82 (370)
Q Consensus         9 ~~~~~l~~l~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~r~~~~~l~l~~~~~~~~~~----~~~~~-~~~~~~~~~~~g   82 (370)
                      ...|.++.+++.+.-+...+..|..... |=-...++++..+.+.+.++|.+.+.+.-    ..++. ..+-|..+.+.|
T Consensus       183 s~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsg  262 (347)
T KOG1442|consen  183 SWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSG  262 (347)
T ss_pred             chhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHH
Confidence            4579999999999999999999976554 22367888999999999999988764321    12233 456677777788


Q ss_pred             HHHHHHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhh
Q 017528           83 LIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAF  154 (370)
Q Consensus        83 ~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~  154 (370)
                      ++|+..++. -.+=++-++|-.--+-...-...-.+++..+++|..+..      .|-+-++.++|-..-..
T Consensus       263 lfgF~mgyv-Tg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~l------wwtsn~~vLvgs~~YT~  327 (347)
T KOG1442|consen  263 LFGFAMGYV-TGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGL------WWTSNIVVLVGSLAYTL  327 (347)
T ss_pred             HHHHHhhhe-eeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhh------eeeeeEEEEehhHHHHH
Confidence            887554431 122223333322222222334455678899999999988      88888888877665444

>PRK02237 hypothetical protein; Provisional

Probab=83.30  E-value=2.1  Score=32.41  Aligned_cols=41  Identities=5%  Similarity=-0.031  Sum_probs=34.3

Q ss_pred             chHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHhcCc
Q 017528          290 PLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLWGK  330 (370)
Q Consensus       290 ~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~  330 (370)
                      -.-.+.+.++.+.+-|++|+...++|.++.++|+.+..+..
T Consensus        67 GvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p  107 (109)
T PRK02237         67 GVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP  107 (109)
T ss_pred             hHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence            34456677889999999999999999999999998876543

>PRK02237 hypothetical protein; Provisional

Probab=82.60  E-value=16  Score=27.79  Aligned_cols=49  Identities=14%  Similarity=0.131  Sum_probs=37.5

Q ss_pred             cChhhHhhhc-cchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhh
Q 017528          100 TSATLAAATT-NCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAF  154 (370)
Q Consensus       100 ~~~~~~~~i~-~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~  154 (370)
                      ...+.+-.-+ ....+...+..+.+-++|++..      +++|..++++|+.++.+
T Consensus        56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~------D~iGa~v~L~G~~iI~~  105 (109)
T PRK02237         56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRW------DWIGAAICLVGMAVIMY  105 (109)
T ss_pred             hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChh------HHHhHHHHHHhHHHhee
Confidence            3355555555 5666777788888877777777      99999999999998875

>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function

Probab=81.91  E-value=2.1  Score=32.34  Aligned_cols=40  Identities=8%  Similarity=0.072  Sum_probs=34.1

Q ss_pred             hHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHhcCc
Q 017528          291 LALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLWGK  330 (370)
Q Consensus       291 ~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~  330 (370)
                      .-.+.+.++++.+-+++|+...++|.++.++|+.+..+..
T Consensus        66 vfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~P  105 (107)
T PF02694_consen   66 VFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAP  105 (107)
T ss_pred             hHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecC
Confidence            3456678889999999999999999999999999877654

; GO: 0016020 membrane

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	370
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	99.1
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.69
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.67
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.65

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=99.10  E-value=6.7e-11  Score=93.86  Aligned_cols=70  Identities=14%  Similarity=0.185  Sum_probs=53.8

Q ss_pred             HHHHHHHHHHHHHHHHHhccCceeEEec-cchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHhcCc
Q 017528          261 CGIIVTALTYYLQAWVIEKKGPVFLAMS-TPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLWGK  330 (370)
Q Consensus       261 ~g~~~~~~~~~~~~~a~~~~~~~~~s~~-~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~  330 (370)
                      .++++++++++++.+++++.+++++..+ ..+.|+++.+++++++||++++.+++|+++|++|+++....+
T Consensus        35 l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            4667889999999999999999999998 899999999999999999999999999999999999987543

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.69  E-value=2.1e-07  Score=71.06  Aligned_cols=69  Identities=17%  Similarity=0.200  Sum_probs=63.8

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcChhhHhhh-ccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhh
Q 017528           80 FLSLIGITFSLDLYGIALIYTSATLAAAT-TNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAF  154 (370)
Q Consensus        80 ~~g~~~~~~~~~~~~~al~~~~~~~~~~i-~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~  154 (370)
                      +.+++...+++.++.+++++.|.+.+..+ ..+.|+++.+++++++||+++..      +++|+.+++.|++++..
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~------~~~Gi~lIi~Gv~~l~~  103 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLP------AIIGMMLICAGVLIINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHhc
Confidence            45666668899999999999999999999 69999999999999999999999      99999999999999875

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.67  E-value=2.2e-07  Score=70.94  Aligned_cols=69  Identities=14%  Similarity=0.187  Sum_probs=63.6

Q ss_pred             HHHHHHHHHHHHHHHHHhccCceeEEec-cchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHhcC
Q 017528          261 CGIIVTALTYYLQAWVIEKKGPVFLAMS-TPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLWG  329 (370)
Q Consensus       261 ~g~~~~~~~~~~~~~a~~~~~~~~~s~~-~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~  329 (370)
                      .++++.+.++.++.+++|+.+.+.+..+ ..+.|+++.+++++++||++++.+++|.++++.|+++....
T Consensus        35 ~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~  104 (110)
T 3b5d_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            4566788999999999999999999888 89999999999999999999999999999999999988643

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.65  E-value=5.6e-08  Score=77.00  Aligned_cols=70  Identities=17%  Similarity=0.198  Sum_probs=53.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcChhhHhhh-ccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhc
Q 017528           80 FLSLIGITFSLDLYGIALIYTSATLAAAT-TNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFY  155 (370)
Q Consensus        80 ~~g~~~~~~~~~~~~~al~~~~~~~~~~i-~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~  155 (370)
                      +.+++.+++++.++++++++.+++.+..+ .++.|+++.++++++++|+++..      +++|+++++.|++++...
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~------~~~Gi~LIi~GV~ll~~~  104 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLP------AIIGMMLICAGVLIINLL  104 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------------CHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHhcC
Confidence            46666678999999999999999999999 79999999999999999999999      999999999999998763

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00