Citrus Sinensis ID: 017562

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------37
MGGTGWGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGKGSRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHGGYNQLLPVIVPAATPVVTKPSPAPKPKTIPPTKPKTTPAPASSSGAIAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISKLYGPLWGLTNLGNAYGFPSWLNNLAAGKSLEFVYIHTANAADVSVSAYTLA
ccccccccccccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHccccccEEcccccEEEEccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHcccEEccccccccEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEEEEEcccEEEEEEEEEEEEccccccccEEEEEEEccccccccEEcccEEEccccccccccccEEEEEEEEcccccEEEEEEEEEc
cccccccccEccccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccccccccEEccccEEEEcccccHHHHHHHHHHHHHHHHHHHHccccEEcccccccHHHHHHHHHHHHHHHHcccccccccEcccccccccccEcHHHHccccccccccEccccccHHHHcccccccccccccEccccccccccccccccHHHHEccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEcccccccEEEEEEEEEEEccccccccEEEEEEEcccccEcccccccccEccccHHHccccccEEEEEEEEcccccEEEEEEEEcc
mggtgwgmtefgwdvkypgVQTLVAKFLMqgkaghyapvFERYQQKAEYFMCsclgkgsrnvqktpgglifRQRWNNMQFVTSASFLATVYSDYLASAGrdlkcsagnvapaELLGFAKSQVDyilgdnpratsymvgygnnypqrvhHRASSIVsikvnpsfvscrggyatwfsskgsdpnllvgavvggpdaydnfgdrrdnyeqtepatynnapILGILARLnaghggynqllpvivpaatpvvtkpspapkpktipptkpkttpapasssgaIAIQQKLTTswisngkryyrySTIVTNKSAKTLKNLKLSISKlygplwgltnlgnaygfpswlnnlaagkSLEFVYIHTANAADVSVSAYTLA
mggtgwgmtefgwdVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGKGSRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHGGYNQLLPVIVPAATpvvtkpspapkpktipptkpkttpapasssgaIAIQQKlttswisngkryYRYSTivtnksaktlKNLKLSISKLYGPLWGLTNLGNAYGFPSWLNNLAAGKSLEFVYIHTANAADVSVSAYTLA
MGGTGWGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGKGSRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHGGYNQLLpvivpaatpvvtkpspapkpktipptkpkttpapasssgaiaiQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISKLYGPLWGLTNLGNAYGFPSWLNNLAAGKSLEFVYIHTANAADVSVSAYTLA
****GWGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGKGSRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHGGYNQLLPVIVPAATPV******************************IAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISKLYGPLWGLTNLGNAYGFPSWLNNLAAGKSLEFVYIHTANAADVSVS*****
MGGTGWGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGKGSRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSI**IKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHGGYNQLLPVI*****************KTIPPTKPKTTPAPASSSGAIAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISKLYGPLWGLTNLGNAYGFPSWLNNLAAGKSLEFVYIHTANAADVSVSAYTLA
MGGTGWGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGKGSRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHGGYNQLLPVIVPAATPVVT**************************GAIAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISKLYGPLWGLTNLGNAYGFPSWLNNLAAGKSLEFVYIHTANAADVSVSAYTLA
*****WGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGKGSRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHGGYN*****************************KPKTTPA**SSSGAIAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISKLYGPLWGLTNLGNAYGFPSWLNNLAAGKSLEFVYIHTANAADVSVSAYTLA
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MGGTGWGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGKGSRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHGGYNQLLPVIVPAATPVVTKPSPAPKPKTIPPTKPKTTPAPASSSGAIAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISKLYGPLWGLTNLGNAYGFPSWLNNLAAGKSLEFVYIHTANAADVSVSAYTLA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query369 2.2.26 [Sep-21-2011]
Q42059620 Endoglucanase 6 OS=Arabid yes no 0.967 0.575 0.723 1e-160
Q8L7I0626 Endoglucanase 19 OS=Arabi no no 0.978 0.576 0.709 1e-155
Q5NAT0640 Endoglucanase 2 OS=Oryza yes no 0.956 0.551 0.539 1e-109
Q6L4I2629 Endoglucanase 15 OS=Oryza no no 0.956 0.561 0.547 1e-108
Q5NAT8640 Endoglucanase 1 OS=Oryza no no 0.937 0.540 0.515 9e-93
Q9M995627 Endoglucanase 5 OS=Arabid no no 0.964 0.567 0.447 5e-85
A2XYW8625 Endoglucanase 13 OS=Oryza N/A no 0.932 0.550 0.433 1e-83
Q0J930625 Endoglucanase 13 OS=Oryza no no 0.932 0.550 0.430 4e-83
O48766525 Endoglucanase 11 OS=Arabi no no 0.607 0.426 0.526 8e-71
Q6H3Z9556 Endoglucanase 22 OS=Oryza no no 0.612 0.406 0.493 2e-64
>sp|Q42059|GUN6_ARATH Endoglucanase 6 OS=Arabidopsis thaliana GN=At1g64390 PE=2 SV=2 Back     alignment and function desciption
 Score =  565 bits (1456), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 267/369 (72%), Positives = 313/369 (84%), Gaps = 12/369 (3%)

Query: 1   MGGTGWGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGKGSR 60
           MGGTGW MTEFGWDVKY GVQTLVAKFLMQGKAG +APVF +YQ+KA+ FMCS LGK SR
Sbjct: 264 MGGTGWSMTEFGWDVKYAGVQTLVAKFLMQGKAGRHAPVFRKYQEKADSFMCSLLGKSSR 323

Query: 61  NVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKS 120
           N+QKTPGGLIFRQRWNNMQFVTSASFL TVYSDYL S+  +L+C+AGNVAP++LL FAKS
Sbjct: 324 NIQKTPGGLIFRQRWNNMQFVTSASFLTTVYSDYLTSSRSNLRCAAGNVAPSQLLSFAKS 383

Query: 121 QVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSD 180
           QVDYILGDNPRATSYMVGYGNN+PQRVHHR SSIVS+KV+ +FV+CRGGYATWFS KGSD
Sbjct: 384 QVDYILGDNPRATSYMVGYGNNFPQRVHHRGSSIVSVKVDRTFVTCRGGYATWFSRKGSD 443

Query: 181 PNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHGGYNQLLPVIV 240
           PNLL GA+VGGPDAYDNF DRRDNYEQTEPATYNNAP+LG+LARL++GH GY+Q LPV V
Sbjct: 444 PNLLTGAIVGGPDAYDNFADRRDNYEQTEPATYNNAPLLGVLARLSSGHSGYSQFLPV-V 502

Query: 241 PAATPVVTKPSPAPKPKTIPPTKPKTTPAPASSSGAIAIQQKLTTSWISNGKRYYRYSTI 300
           PA  PVV +P P  +PK   P +         +SG +AI QK+T+SW+S G+ YYRYST 
Sbjct: 503 PA--PVVRRPMPIRRPKVTTPVR---------ASGPVAIVQKITSSWVSKGRTYYRYSTT 551

Query: 301 VTNKSAKTLKNLKLSISKLYGPLWGLTNLGNAYGFPSWLNNLAAGKSLEFVYIHTANAAD 360
           V NKS++ LK+L LSI  LYGP+WGL+  GN++G PSW+++L +GKSLEFVYIH+   A+
Sbjct: 552 VINKSSRPLKSLNLSIKNLYGPIWGLSRSGNSFGLPSWMHSLPSGKSLEFVYIHSTTPAN 611

Query: 361 VSVSAYTLA 369
           V+VS+YTLA
Sbjct: 612 VAVSSYTLA 620

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 4
>sp|Q8L7I0|GUN19_ARATH Endoglucanase 19 OS=Arabidopsis thaliana GN=At4g11050 PE=2 SV=1 Back     alignment and function description
>sp|Q5NAT0|GUN2_ORYSJ Endoglucanase 2 OS=Oryza sativa subsp. japonica GN=GLU5 PE=1 SV=1 Back     alignment and function description
>sp|Q6L4I2|GUN15_ORYSJ Endoglucanase 15 OS=Oryza sativa subsp. japonica GN=Os05g0212300 PE=2 SV=1 Back     alignment and function description
>sp|Q5NAT8|GUN1_ORYSJ Endoglucanase 1 OS=Oryza sativa subsp. japonica GN=GLU7 PE=2 SV=1 Back     alignment and function description
>sp|Q9M995|GUN5_ARATH Endoglucanase 5 OS=Arabidopsis thaliana GN=At1g48930 PE=2 SV=1 Back     alignment and function description
>sp|A2XYW8|GUN13_ORYSI Endoglucanase 13 OS=Oryza sativa subsp. indica GN=GLU6 PE=3 SV=2 Back     alignment and function description
>sp|Q0J930|GUN13_ORYSJ Endoglucanase 13 OS=Oryza sativa subsp. japonica GN=GLU6 PE=2 SV=1 Back     alignment and function description
>sp|O48766|GUN11_ARATH Endoglucanase 11 OS=Arabidopsis thaliana GN=At2g32990 PE=2 SV=1 Back     alignment and function description
>sp|Q6H3Z9|GUN22_ORYSJ Endoglucanase 22 OS=Oryza sativa subsp. japonica GN=GLU11 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query369
224058299 622 predicted protein [Populus trichocarpa] 0.967 0.573 0.807 1e-176
356523525 625 PREDICTED: endoglucanase 6-like [Glycine 0.978 0.577 0.799 1e-175
429326602 622 korrigan [Populus tomentosa] 0.964 0.572 0.788 1e-173
224072192 622 glycosyl hydrolase family 9 [Populus tri 0.964 0.572 0.788 1e-173
90017357 620 endo-beta-1,4-glucanase [Prunus persica] 0.962 0.572 0.802 1e-172
90017355 620 endo-beta-1,4-glucanase [Prunus persica] 0.962 0.572 0.799 1e-171
225426356 629 PREDICTED: endoglucanase 6 [Vitis vinife 0.978 0.573 0.769 1e-170
429326600 614 korrigan [Populus tomentosa] 0.945 0.568 0.780 1e-167
22208353 620 endo-beta-1,4-glucanase [Fragaria x anan 0.962 0.572 0.766 1e-164
350535030 625 endo-beta-1,4-D-glucanase precursor [Sol 0.981 0.579 0.766 1e-164
>gi|224058299|ref|XP_002299478.1| predicted protein [Populus trichocarpa] gi|222846736|gb|EEE84283.1| predicted protein [Populus trichocarpa] gi|347466587|gb|AEO97206.1| endo-1,4-beta-glucanase [Populus trichocarpa] gi|347466641|gb|AEO97233.1| endo-1,4-beta-glucanase [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  624 bits (1608), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 298/369 (80%), Positives = 328/369 (88%), Gaps = 12/369 (3%)

Query: 1   MGGTGWGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGKGSR 60
           MGGTGWGMTEFGWDVKY GVQTLVAKFLMQGKAGH+APVFE+YQQKAEYFMCSCLGKGSR
Sbjct: 266 MGGTGWGMTEFGWDVKYAGVQTLVAKFLMQGKAGHHAPVFEKYQQKAEYFMCSCLGKGSR 325

Query: 61  NVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKS 120
           NVQKTPGGLIFRQRWNNMQFVTSASFL TVYSDYLASAGR+L C+AGNVAP +LL FAKS
Sbjct: 326 NVQKTPGGLIFRQRWNNMQFVTSASFLTTVYSDYLASAGRNLNCAAGNVAPTQLLAFAKS 385

Query: 121 QVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSD 180
           QVDYILGDNPRATSYMVGYGNNYP++VHHR SSIVS KV+P+FV+CRGGYATWFS KGSD
Sbjct: 386 QVDYILGDNPRATSYMVGYGNNYPRQVHHRGSSIVSYKVDPTFVTCRGGYATWFSRKGSD 445

Query: 181 PNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHGGYNQLLPVIV 240
           PNLL GA+VGGPDAYDNF D RDNYEQTEPATYNNAP+LG+LARL+ GHGGYNQLLPV+V
Sbjct: 446 PNLLTGAIVGGPDAYDNFADERDNYEQTEPATYNNAPLLGLLARLSGGHGGYNQLLPVVV 505

Query: 241 PAATPVVTKPSPAPKPKTIPPTKPKTTPAPASSSGAIAIQQKLTTSWISNGKRYYRYSTI 300
           PA  P+  KP+P          + K TPAPAS+S  +AI QK T +WI+ GK YYRYSTI
Sbjct: 506 PA--PIEKKPAP----------QTKITPAPASTSAPVAIVQKTTATWIAKGKTYYRYSTI 553

Query: 301 VTNKSAKTLKNLKLSISKLYGPLWGLTNLGNAYGFPSWLNNLAAGKSLEFVYIHTANAAD 360
           VTNKSAK LK++KLSISKLYGPLWGLT  GN Y FPSW+ +LAAGKSLEFVY+H+A+AAD
Sbjct: 554 VTNKSAKELKDIKLSISKLYGPLWGLTKSGNFYAFPSWITSLAAGKSLEFVYVHSASAAD 613

Query: 361 VSVSAYTLA 369
           VSVS+YTLA
Sbjct: 614 VSVSSYTLA 622

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356523525|ref|XP_003530388.1| PREDICTED: endoglucanase 6-like [Glycine max] Back     alignment and taxonomy information
>gi|429326602|gb|AFZ78641.1| korrigan [Populus tomentosa] Back     alignment and taxonomy information
>gi|224072192|ref|XP_002303645.1| glycosyl hydrolase family 9 [Populus trichocarpa] gi|222841077|gb|EEE78624.1| glycosyl hydrolase family 9 [Populus trichocarpa] gi|347466589|gb|AEO97207.1| endo-1,4-beta-glucanase [Populus trichocarpa] gi|347466643|gb|AEO97234.1| endo-1,4-beta-glucanase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|90017357|emb|CAI68020.1| endo-beta-1,4-glucanase [Prunus persica] Back     alignment and taxonomy information
>gi|90017355|emb|CAI68019.1| endo-beta-1,4-glucanase [Prunus persica] Back     alignment and taxonomy information
>gi|225426356|ref|XP_002270880.1| PREDICTED: endoglucanase 6 [Vitis vinifera] gi|147821654|emb|CAN66000.1| hypothetical protein VITISV_031862 [Vitis vinifera] gi|297742327|emb|CBI34476.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|429326600|gb|AFZ78640.1| korrigan [Populus tomentosa] Back     alignment and taxonomy information
>gi|22208353|emb|CAC94006.1| endo-beta-1,4-glucanase [Fragaria x ananassa] Back     alignment and taxonomy information
>gi|350535030|ref|NP_001234172.1| endo-beta-1,4-D-glucanase precursor [Solanum lycopersicum] gi|4165132|gb|AAD08699.1| endo-beta-1,4-D-glucanase [Solanum lycopersicum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query369
TAIR|locus:2014205620 GH9C2 "glycosyl hydrolase 9C2" 0.639 0.380 0.826 3.4e-141
TAIR|locus:2136073626 GH9C3 "glycosyl hydrolase 9C3" 0.639 0.376 0.779 4.1e-134
TAIR|locus:2028441627 GH9C1 "glycosyl hydrolase 9C1" 0.628 0.370 0.525 5.7e-84
TAIR|locus:2059375525 GH9B8 "glycosyl hydrolase 9B8" 0.609 0.428 0.528 1.7e-66
TAIR|locus:2042441490 GH9B10 "glycosyl hydrolase 9B1 0.593 0.446 0.495 8.4e-58
TAIR|locus:2042376491 GH9B9 "glycosyl hydrolase 9B9" 0.596 0.448 0.488 1.1e-57
TAIR|locus:2042461492 GH9B12 "glycosyl hydrolase 9B1 0.598 0.449 0.484 3.6e-57
TAIR|locus:2042451491 GH9B11 "glycosyl hydrolase 9B1 0.596 0.448 0.484 8.6e-56
TAIR|locus:2028015489 GH9B6 "glycosyl hydrolase 9B6" 0.577 0.435 0.470 7.4e-50
TAIR|locus:2033600492 GH9B1 "glycosyl hydrolase 9B1" 0.582 0.436 0.466 9.5e-50
TAIR|locus:2014205 GH9C2 "glycosyl hydrolase 9C2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1085 (387.0 bits), Expect = 3.4e-141, Sum P(2) = 3.4e-141
 Identities = 195/236 (82%), Positives = 217/236 (91%)

Query:     1 MGGTGWGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGKGSR 60
             MGGTGW MTEFGWDVKY GVQTLVAKFLMQGKAG +APVF +YQ+KA+ FMCS LGK SR
Sbjct:   264 MGGTGWSMTEFGWDVKYAGVQTLVAKFLMQGKAGRHAPVFRKYQEKADSFMCSLLGKSSR 323

Query:    61 NVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKS 120
             N+QKTPGGLIFRQRWNNMQFVTSASFL TVYSDYL S+  +L+C+AGNVAP++LL FAKS
Sbjct:   324 NIQKTPGGLIFRQRWNNMQFVTSASFLTTVYSDYLTSSRSNLRCAAGNVAPSQLLSFAKS 383

Query:   121 QVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSD 180
             QVDYILGDNPRATSYMVGYGNN+PQRVHHR SSIVS+KV+ +FV+CRGGYATWFS KGSD
Sbjct:   384 QVDYILGDNPRATSYMVGYGNNFPQRVHHRGSSIVSVKVDRTFVTCRGGYATWFSRKGSD 443

Query:   181 PNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHGGYNQLL 236
             PNLL GA+VGGPDAYDNF DRRDNYEQTEPATYNNAP+LG+LARL++GH GY+Q L
Sbjct:   444 PNLLTGAIVGGPDAYDNFADRRDNYEQTEPATYNNAPLLGVLARLSSGHSGYSQFL 499
GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0030246 "carbohydrate binding" evidence=IEA
TAIR|locus:2136073 GH9C3 "glycosyl hydrolase 9C3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2028441 GH9C1 "glycosyl hydrolase 9C1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2059375 GH9B8 "glycosyl hydrolase 9B8" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042441 GH9B10 "glycosyl hydrolase 9B10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042376 GH9B9 "glycosyl hydrolase 9B9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042461 GH9B12 "glycosyl hydrolase 9B12" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042451 GH9B11 "glycosyl hydrolase 9B11" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2028015 GH9B6 "glycosyl hydrolase 9B6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2033600 GH9B1 "glycosyl hydrolase 9B1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q42059GUN6_ARATH3, ., 2, ., 1, ., 40.72350.96740.5758yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1.40.914
3rd Layer3.2.10.921

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query369
PLN02171629 PLN02171, PLN02171, endoglucanase 0.0
PLN02340614 PLN02340, PLN02340, endoglucanase 1e-126
PLN02420525 PLN02420, PLN02420, endoglucanase 4e-98
PLN00119489 PLN00119, PLN00119, endoglucanase 4e-89
pfam00759437 pfam00759, Glyco_hydro_9, Glycosyl hydrolase famil 1e-75
PLN02308492 PLN02308, PLN02308, endoglucanase 2e-71
PLN02266510 PLN02266, PLN02266, endoglucanase 2e-67
PLN02613498 PLN02613, PLN02613, endoglucanase 1e-65
PLN03009495 PLN03009, PLN03009, cellulase 9e-62
PLN02345469 PLN02345, PLN02345, endoglucanase 1e-59
PLN02909486 PLN02909, PLN02909, Endoglucanase 2e-59
PLN02175484 PLN02175, PLN02175, endoglucanase 8e-52
pfam0947880 pfam09478, CBM49, Carbohydrate binding domain CBM4 9e-33
smart0106384 smart01063, CBM49, Carbohydrate binding domain CBM 5e-19
PRK06549130 PRK06549, PRK06549, acetyl-CoA carboxylase biotin 0.003
>gnl|CDD|215115 PLN02171, PLN02171, endoglucanase Back     alignment and domain information 
 Score =  653 bits (1687), Expect = 0.0
 Identities = 279/369 (75%), Positives = 309/369 (83%), Gaps = 8/369 (2%)

Query: 1   MGGTGWGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGKGSR 60
           +GGTGW MTEFGWDVKY GVQ LVAKFLMQGKAG +A VF+RYQQKAE+FMCSCLGKG+R
Sbjct: 269 LGGTGWSMTEFGWDVKYAGVQVLVAKFLMQGKAGEHAAVFQRYQQKAEFFMCSCLGKGAR 328

Query: 61  NVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKS 120
           NVQKTPGGLI+RQRWNNMQFVTSASFL TVYSDYLAS+GR L+C+AGN AP++LL FAKS
Sbjct: 329 NVQKTPGGLIYRQRWNNMQFVTSASFLLTVYSDYLASSGRALRCAAGNAAPSQLLAFAKS 388

Query: 121 QVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSD 180
           QVDYILGDNPRATSYMVGYG NYP++VHHR SSIVSIKV+PSFVSCRGGYATWFS KGSD
Sbjct: 389 QVDYILGDNPRATSYMVGYGANYPRQVHHRGSSIVSIKVDPSFVSCRGGYATWFSRKGSD 448

Query: 181 PNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHGGYNQLLPVIV 240
           PNLL GA+VGGPDAYDNF D RDNYEQTEPATYNNAP+LG+LARL  GHGGYNQLL V V
Sbjct: 449 PNLLTGAIVGGPDAYDNFADERDNYEQTEPATYNNAPLLGVLARLAGGHGGYNQLLVV-V 507

Query: 241 PAATPVVTKPSPAPKPKTIPPTKPKTTPAPASSSGAIAIQQKLTTSWISNGKRYYRYSTI 300
           PA + V    +PA       P +   TPAPAS+S  I I+QK T SW + G+ YYRYST 
Sbjct: 508 PAPSEVAINRTPA-------PQRRPPTPAPASTSSPIEIEQKATASWKAKGRTYYRYSTT 560

Query: 301 VTNKSAKTLKNLKLSISKLYGPLWGLTNLGNAYGFPSWLNNLAAGKSLEFVYIHTANAAD 360
           VTN+SAKTLK L L ISKLYGPLWGLT  G  Y  PSW+ +L AGKSLEFVY+H+A+ AD
Sbjct: 561 VTNRSAKTLKELHLGISKLYGPLWGLTKAGYGYVLPSWMPSLPAGKSLEFVYVHSASPAD 620

Query: 361 VSVSAYTLA 369
           V VS Y LA
Sbjct: 621 VWVSGYKLA 629

Length = 629
>gnl|CDD|215194 PLN02340, PLN02340, endoglucanase Back     alignment and domain information
>gnl|CDD|178040 PLN02420, PLN02420, endoglucanase Back     alignment and domain information
>gnl|CDD|177732 PLN00119, PLN00119, endoglucanase Back     alignment and domain information
>gnl|CDD|216104 pfam00759, Glyco_hydro_9, Glycosyl hydrolase family 9 Back     alignment and domain information
>gnl|CDD|177943 PLN02308, PLN02308, endoglucanase Back     alignment and domain information
>gnl|CDD|215150 PLN02266, PLN02266, endoglucanase Back     alignment and domain information
>gnl|CDD|215331 PLN02613, PLN02613, endoglucanase Back     alignment and domain information
>gnl|CDD|166650 PLN03009, PLN03009, cellulase Back     alignment and domain information
>gnl|CDD|177979 PLN02345, PLN02345, endoglucanase Back     alignment and domain information
>gnl|CDD|178497 PLN02909, PLN02909, Endoglucanase Back     alignment and domain information
>gnl|CDD|177832 PLN02175, PLN02175, endoglucanase Back     alignment and domain information
>gnl|CDD|220256 pfam09478, CBM49, Carbohydrate binding domain CBM49 Back     alignment and domain information
>gnl|CDD|215005 smart01063, CBM49, Carbohydrate binding domain CBM49 Back     alignment and domain information
>gnl|CDD|235826 PRK06549, PRK06549, acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; Validated Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 369
PLN02171629 endoglucanase 100.0
PLN02340614 endoglucanase 100.0
PLN00119489 endoglucanase 100.0
PLN02420525 endoglucanase 100.0
PLN02266510 endoglucanase 100.0
PLN02175484 endoglucanase 100.0
PLN02308492 endoglucanase 100.0
PLN02345469 endoglucanase 100.0
PLN02613498 endoglucanase 100.0
PLN02909486 Endoglucanase 100.0
PLN03009495 cellulase 100.0
PF00759444 Glyco_hydro_9: Glycosyl hydrolase family 9; InterP 100.0
PF0947880 CBM49: Carbohydrate binding domain CBM49; InterPro 99.88
PF00553101 CBM_2: Cellulose binding domain; InterPro: IPR0019 98.97
smart0063792 CBD_II CBD_II domain. 98.52
COG5297544 CelA Cellobiohydrolase A (1,4-beta-cellobiosidase 96.78
PF06483180 ChiC: Chitinase C; InterPro: IPR009470 This ~170 a 96.69
PF09624149 DUF2393: Protein of unknown function (DUF2393); In 87.34
>PLN02171 endoglucanase Back     alignment and domain information 
Probab=100.00  E-value=2.6e-94  Score=755.27  Aligned_cols=361  Identities=77%  Similarity=1.287  Sum_probs=321.2

Q ss_pred             CCCCCCCCceeecccchhHHHHHhhhhhccCCCCCchHHHHHHHHHHHHhhhhhcCCCCCceeeCCCcceeccCCCcHHH
Q 017562            1 MGGTGWGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGKGSRNVQKTPGGLIFRQRWNNMQF   80 (369)
Q Consensus         1 ~~~~~~~~~~fsWD~K~~gv~vLla~~~~~~~~~~~~~~~~~y~~~ae~~~c~~l~~~~~~~~~TpgGl~~~~~Wgs~~y   80 (369)
                      ++|.+|.+.+|+||+|++|+++||++++++++.+.+...+++|+++||.|+|++++++...+.+|||||+|+++||+|||
T Consensus       269 ~~~~~~~~~~f~WD~k~~G~~~L~a~~~~~~~~~~~~~~~~~y~~~ad~~~~~~l~~~~~~~~~TpgGl~~~~~Wgs~~y  348 (629)
T PLN02171        269 LGGTGWSMTEFGWDVKYAGVQVLVAKFLMQGKAGEHAAVFQRYQQKAEFFMCSCLGKGARNVQKTPGGLIYRQRWNNMQF  348 (629)
T ss_pred             hccCcccCccccccccchHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHhhccCCCceeeecCCeeEEECCCChHHH
Confidence            46788998999999999999999999987666667788899999999999999998866679999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhhhcCCccccCCCCCChHHHHHHHHhcchhhhCCCCCCceeEEeeCCCCCCCccccccccccccCC
Q 017562           81 VTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVN  160 (369)
Q Consensus        81 ~an~Afl~~~ya~~l~~~~~~~~c~~~~~~~~~~~~~A~~QidYiLG~Np~~~SyvvG~G~~~P~~pHHR~ss~p~~~~~  160 (369)
                      ++|+|||+++|+|++.++++.++|+.....+++|++||++|||||||+||+++|||||||+|+|+|||||+||||+++.+
T Consensus       349 ~~naafl~~vyad~~~~~~~~~~c~~~~~~~~~y~~fA~~QidYiLG~Np~~~SYvVGyG~n~P~~pHHR~as~~~~~~~  428 (629)
T PLN02171        349 VTSASFLLTVYSDYLASSGRALRCAAGNAAPSQLLAFAKSQVDYILGDNPRATSYMVGYGANYPRQVHHRGSSIVSIKVD  428 (629)
T ss_pred             HHHHHHHHHHHHHHhhhcccccccccccCCHHHHHHHHHHhhhhhcCCCCCCCceEeecCCCCCCCcccccccCCccccC
Confidence            99999999999999988877899998888999999999999999999999999999999999999999999999999999


Q ss_pred             CCccccCCCccccccCCCCCCCCccceeecCCCCCCCcccccCcccccccccCCCchHHHHHHHHhhcCCCCCCcccccc
Q 017562          161 PSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHGGYNQLLPVIV  240 (369)
Q Consensus       161 p~~~~C~~G~~~~~~~~~~np~vl~GAlVGGPd~~D~f~D~r~~y~~nEvaid~NA~~vg~lA~l~~~~~~~~~~~~~~~  240 (369)
                      |.+++|.+||+.|++++.||||+|+||||||||++|.|.|+|+||++|||||||||||||+||+|...++++.+.+.. .
T Consensus       429 ~~~~~C~~g~~~~~~~~~~np~vl~GAlVGGPd~~D~y~D~r~~y~~nEva~d~NA~~vg~lA~l~~~~~~~~~~~~~-~  507 (629)
T PLN02171        429 PSFVSCRGGYATWFSRKGSDPNLLTGAIVGGPDAYDNFADERDNYEQTEPATYNNAPLLGVLARLAGGHGGYNQLLVV-V  507 (629)
T ss_pred             ccccCCCCccchhccCCCCCCCcccCceecCCCcCCCCCccccccccCceeEecchHHHHHHHHHHhhcCCccccccc-c
Confidence            999999999999999999999999999999999999999999999999999999999999999999988888765511 1


Q ss_pred             CCCCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCCceEEEEeeecccccCCeEEEEEEEEEEeCCCcceeeeEEEeccCC
Q 017562          241 PAATPVVTKPSPAPKPKTIPPTKPKTTPAPASSSGAIAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISKLY  320 (369)
Q Consensus       241 ~~~~~~~~~~~~t~~p~~~~~~~p~~tp~~~~~~~~v~i~q~v~~sW~~gg~~y~q~~VtI~N~g~~~I~~~~i~~~~l~  320 (369)
                      +.|.++.....|.  |.     .|..||.|..+..+|+|+|+++++|.++++.|+||+|+|+|++.++||+++|.+++++
T Consensus       508 ~~~~~~~~~~~~~--~~-----~~~~~~~~~~~~~ei~i~q~v~~sW~~~g~~y~qy~v~I~N~s~~~ik~i~i~~~~~~  580 (629)
T PLN02171        508 PAPSEVAINRTPA--PQ-----RRPPTPAPASTSSPIEIEQKATASWKAKGRTYYRYSTTVTNRSAKTLKELHLGISKLY  580 (629)
T ss_pred             CCccccccccCCC--CC-----CCcccCCCccCcceeEEEEEEEEEEEcCCceEEEEEEEEEECCCCceeeeeeeecccc
Confidence            1122222222111  11     1111222222335899999999999999999999999999999999999999999988


Q ss_pred             CCccccEEcCCeeecCCCcccCCCCCeEEEEEEeCCCCceEEEEeEEeC
Q 017562          321 GPLWGLTNLGNAYGFPSWLNNLAAGKSLEFVYIHTANAADVSVSAYTLA  369 (369)
Q Consensus       321 ~~iWnv~~~~n~~tLPs~~~~I~~G~s~~FGYI~~g~~a~l~V~~~~~~  369 (369)
                      .+||||++.+|+|+||+|+.+|++|++++||||+++.+|+|+|++|.|+
T Consensus       581 ~~iW~v~~~~ngytlPs~~~sL~aG~s~tFgyI~~~~pA~~~v~~y~~~  629 (629)
T PLN02171        581 GPLWGLTKAGYGYVLPSWMPSLPAGKSLEFVYVHSASPADVWVSGYKLA  629 (629)
T ss_pred             ccchheeecCCcccCchhhcccCCCCeeEEEeecCCCCceEEEEEEEeC
Confidence            9999999988999999999999999999999999966999999999874

>PLN02340 endoglucanase Back     alignment and domain information
>PLN00119 endoglucanase Back     alignment and domain information
>PLN02420 endoglucanase Back     alignment and domain information
>PLN02266 endoglucanase Back     alignment and domain information
>PLN02175 endoglucanase Back     alignment and domain information
>PLN02308 endoglucanase Back     alignment and domain information
>PLN02345 endoglucanase Back     alignment and domain information
>PLN02613 endoglucanase Back     alignment and domain information
>PLN02909 Endoglucanase Back     alignment and domain information
>PLN03009 cellulase Back     alignment and domain information
>PF00759 Glyco_hydro_9: Glycosyl hydrolase family 9; InterPro: IPR001701 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF09478 CBM49: Carbohydrate binding domain CBM49; InterPro: IPR019028 A carbohydrate-binding module (CBM) is defined as a contiguous amino acid sequence within a carbohydrate-active enzyme with a discreet fold having carbohydrate-binding activity Back     alignment and domain information
>PF00553 CBM_2: Cellulose binding domain; InterPro: IPR001919 The microbial degradation of cellulose and xylans requires several types of enzyme such as endoglucanases (3 Back     alignment and domain information
>smart00637 CBD_II CBD_II domain Back     alignment and domain information
>COG5297 CelA Cellobiohydrolase A (1,4-beta-cellobiosidase A) [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF06483 ChiC: Chitinase C; InterPro: IPR009470 This ~170 aa region is found at the C-terminal to the catalytic domain (IPR001223 from INTERPRO) found in members of glycoside hydrolase family 18 Back     alignment and domain information
>PF09624 DUF2393: Protein of unknown function (DUF2393); InterPro: IPR013417 The function of this protein is unknown Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query369
1ks8_A433 The Structure Of Endoglucanase From Termite, Nasuti 7e-20
2xfg_A466 Reassembly And Co-Crystallization Of A Family 9 Pro 2e-19
1ia6_A441 Crystal Structure Of The Cellulase Cel9m Of C. Cell 5e-18
1js4_A605 EndoEXOCELLULASE:CELLOBIOSE FROM THERMOMONOSPORA Le 2e-16
4dod_A475 The Structure Of Cbescii Cela Gh9 Module Length = 4 4e-16
2yik_A611 Catalytic Domain Of Clostridium Thermocellum Celt L 4e-15
1ga2_A614 The Crystal Structure Of Endoglucanase 9g From Clos 4e-15
1k72_A614 The X-ray Crystal Structure Of Cel9g Complexed With 4e-15
3ez8_A537 Crystal Structure Of Endoglucanase Cel9a From The T 6e-04
>pdb|1KS8|A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. Length = 433 Back     alignment and structure 
Iteration: 1

 Score = 94.7 bits (234), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 104/217 (47%), Gaps = 41/217 (18%)
Query: 13  WDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGKGSRNVQKTPGGLIFR 72
           WD K  GVQ L+AK   +          + Y+   + ++   +     N QKTP GL++ 
Sbjct: 253 WDSKVSGVQVLLAKLTNK----------QAYKDTVQSYVNYLI----NNQQKTPKGLLYI 298
Query: 73  QRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRA 132
             W  ++   +A+F+              L+ +   ++ +    FA++Q+DY LGD  R 
Sbjct: 299 DMWGTLRHAANAAFIM-------------LEAAELGLSASSYRQFAQTQIDYALGDGGR- 344
Query: 133 TSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSDPN--LLVGAVVG 190
            S++ G+G+N P R HHR+SS       P+  +C      W +    DPN  +L GA+VG
Sbjct: 345 -SFVCGFGSNPPTRPHHRSSSCP-----PAPATC-----DWNTFNSPDPNYHVLSGALVG 393
Query: 191 GPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNA 227
           GPD  DN+ D R +Y   E AT  NA     LA L A
Sbjct: 394 GPDQNDNYVDDRSDYVHNEVATDYNAGFQSALAALVA 430
>pdb|2XFG|A Chain A, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules Length = 466 Back     alignment and structure
>pdb|1IA6|A Chain A, Crystal Structure Of The Cellulase Cel9m Of C. Cellulolyticum Length = 441 Back     alignment and structure
>pdb|1JS4|A Chain A, EndoEXOCELLULASE:CELLOBIOSE FROM THERMOMONOSPORA Length = 605 Back     alignment and structure
>pdb|4DOD|A Chain A, The Structure Of Cbescii Cela Gh9 Module Length = 475 Back     alignment and structure
>pdb|2YIK|A Chain A, Catalytic Domain Of Clostridium Thermocellum Celt Length = 611 Back     alignment and structure
>pdb|1GA2|A Chain A, The Crystal Structure Of Endoglucanase 9g From Clostridium Cellulolyticum Complexed With Cellobiose Length = 614 Back     alignment and structure
>pdb|1K72|A Chain A, The X-ray Crystal Structure Of Cel9g Complexed With Cellotriose Length = 614 Back     alignment and structure
>pdb|3EZ8|A Chain A, Crystal Structure Of Endoglucanase Cel9a From The Thermoacidophilic Alicyclobacillus Acidocaldarius Length = 537 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query369
2yik_A611 Endoglucanase; hydrolase; 2.10A {Clostridium therm 2e-69
1g87_A614 Endocellulase 9G; endoglucanase, cellulose binding 3e-69
1tf4_A605 T. fusca endo/EXO-cellulase E4 catalytic domain an 1e-64
2xfg_A466 Endoglucanase 1; hydrolase-sugar binding protein c 2e-63
1ks8_A433 Endo-B-1,4-glucanase; cellulase, endoglucanase, te 3e-61
1ia6_A441 Cellulase CEL9M; cellullase, alpha barrel, hydrola 2e-60
3gzk_A537 Cellulase; fold from GH9 from CAZY database, glyco 1e-56
1ut9_A609 Cellulose 1,4-beta-cellobiosidase; hydrolase, glyc 4e-54
1clc_A639 Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycos 2e-46
3h7l_A586 Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, stru 6e-21
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum} Length = 611 Back     alignment and structure
 Score =  227 bits (580), Expect = 2e-69
 Identities = 79/338 (23%), Positives = 126/338 (37%), Gaps = 63/338 (18%)

Query: 1   MGGTGWGMTEFGWDVKYPGVQTLVAKFLMQGKAG---------HYAPVFERYQQKAEYFM 51
               GW      W+  + G   ++A+                   +   +  Q      +
Sbjct: 309 YAPPGW---IHCWNDVWSGTACILAEINDLYDKDSQNFEDRYKRASNKNQWEQIDFWKPI 365

Query: 52  CSCLGKGSRN-VQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVA 110
              L K S   +  TPGG +F  +W + ++ T+A  +A VY  +                
Sbjct: 366 QDLLDKWSGGGITVTPGGYVFLNQWGSARYNTAAQLIALVYDKHHGDT------------ 413

Query: 111 PAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGY 170
           P++   +A+SQ+DY+LG NP    Y+VGY +N  +  HHRA+S +               
Sbjct: 414 PSKYANWARSQMDYLLGKNPLNRCYVVGYSSNSVKYPHHRAASGLK-------------- 459

Query: 171 ATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHG 230
               +       +L GA+VGGPDA D   DR ++Y   E A   NA  +G  A L    G
Sbjct: 460 --DANDSSPHKYVLYGALVGGPDASDQHVDRTNDYIYNEVAIDYNAAFVGACAGLYRFFG 517

Query: 231 GYNQLLPVIVPAATPVVTKPSPAPKPKTIPPTKPKTTPAPASSSGAIAIQQKLTTSWISN 290
             +               +  P+     +P     T P      G +   QK+T++  + 
Sbjct: 518 DSSM--------------QIDPSMPSHNVPVPPTPTPPDTQIVYGDLNGDQKVTSTDYTM 563

Query: 291 GKRYYRYSTIVTNKSAK--------TLKNLKLSISKLY 320
            KRY   S    N S +         + +  L+I K Y
Sbjct: 564 LKRYLMKSIDRFNTSEQAADLNRDGKINSTDLTILKRY 601
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A* Length = 614 Back     alignment and structure
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A* Length = 605 Back     alignment and structure
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum} Length = 466 Back     alignment and structure
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A Length = 433 Back     alignment and structure
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A* Length = 441 Back     alignment and structure
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A* Length = 537 Back     alignment and structure
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A* Length = 609 Back     alignment and structure
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 Length = 639 Back     alignment and structure
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus} Length = 586 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query369
1tf4_A605 T. fusca endo/EXO-cellulase E4 catalytic domain an 100.0
1g87_A614 Endocellulase 9G; endoglucanase, cellulose binding 100.0
2xfg_A466 Endoglucanase 1; hydrolase-sugar binding protein c 100.0
1ia6_A441 Cellulase CEL9M; cellullase, alpha barrel, hydrola 100.0
1ks8_A433 Endo-B-1,4-glucanase; cellulase, endoglucanase, te 100.0
2yik_A611 Endoglucanase; hydrolase; 2.10A {Clostridium therm 100.0
1ut9_A609 Cellulose 1,4-beta-cellobiosidase; hydrolase, glyc 100.0
3gzk_A537 Cellulase; fold from GH9 from CAZY database, glyco 100.0
1clc_A639 Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycos 100.0
3h7l_A586 Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, stru 99.67
3icg_A515 Endoglucanase D; cellulase, xylanase, carbohydrate 99.11
3ndz_E107 Endoglucanase D; cellotriose, xylanase, carbohydra 99.04
1exg_A110 EXO-1,4-beta-D-glycanase; cellulose binding domain 98.95
2cwr_A103 Chitinase; chitin-binding domain, endoglucanase, h 98.41
1e5b_A87 Xylanase D; hydrolase, xylan binding domain, beta- 97.15
1heh_C88 Endo-1,4-beta-xylanase D; hydrolase(xylan degradat 96.9
3ghp_A227 Cellulosomal scaffoldin adaptor protein B; linker 88.36
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A* Back     alignment and structure
Probab=100.00  E-value=3.9e-52  Score=437.40  Aligned_cols=189  Identities=33%  Similarity=0.565  Sum_probs=168.8

Q ss_pred             ceeecccchhHHHHHhhhhhccCCCCCchHHHHHHHHHHHHhhhhhcCC-CCCceeeCCCcceeccCCCcHHHHHHHHHH
Q 017562            9 TEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGK-GSRNVQKTPGGLIFRQRWNNMQFVTSASFL   87 (369)
Q Consensus         9 ~~fsWD~K~~gv~vLla~~~~~~~~~~~~~~~~~y~~~ae~~~c~~l~~-~~~~~~~TpgGl~~~~~Wgs~~y~an~Afl   87 (369)
                      .+|+||+|.+|+++||++++.  +        ++|++.+|.++|.++++ ++..+++||+||+|+..||++||++|.|||
T Consensus       256 ~~~~Wd~~~~g~~~lla~~~~--~--------~~y~~~a~~~~~~~~~~~~~~~~~~tp~Gl~~~~~WGs~~~~~n~a~l  325 (605)
T 1tf4_A          256 WTIAWDDKSYGTYVLLAKETG--K--------QKYIDDANRWLDYWTVGVNGQRVPYSPGGMAVLDTWGALRYAANTAFV  325 (605)
T ss_dssp             SCCSSSCCHHHHHHHHHHHHC--C--------HHHHHHHHHHHHHTTTCBTTBCCCBCTTSCBCCCSSSHHHHHHHHHHH
T ss_pred             ccccccchHHHHHHHHHhccC--h--------HHHHHHHHHHHHHHhcccCCCccccCCCcceecCCccHHHHHHHHHHH
Confidence            369999999999999998752  1        56999999999988754 445689999999999999999999999999


Q ss_pred             HHHHHHHhhhcCCccccCCCCCChHHHHHHHHhcchhhhCCCCCCceeEEeeCCCCCCCccccccccccccCCCCccccC
Q 017562           88 ATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCR  167 (369)
Q Consensus        88 ~~~ya~~l~~~~~~~~c~~~~~~~~~~~~~A~~QidYiLG~Np~~~SyvvG~G~~~P~~pHHR~ss~p~~~~~p~~~~C~  167 (369)
                      +++|++++...          .++++|++||++|||||||+||+++|||||||+|+|+|||||+|||+            
T Consensus       326 ~~~~a~~~~~~----------~~~~~y~~~A~~qidYiLG~Np~~~SyvvG~G~~~p~~pHHR~ss~~------------  383 (605)
T 1tf4_A          326 ALVYAKVIDDP----------VRKQRYHDFAVRQINYALGDNPRNSSYVVGFGNNPPRNPHHRTAHGS------------  383 (605)
T ss_dssp             HHHHHHHCCCH----------HHHHHHHHHHHHHHHHHHTCSTTCCCSBTTSSSSCCSCCSCHHHHTC------------
T ss_pred             HHHHHHhcccc----------ccHHHHHHHHHHHHHHhcCCCCCCcceEecCCCCCCCCCcccccccC------------
Confidence            99999987421          24689999999999999999999999999999999999999999974            


Q ss_pred             CCccccccCCCCCCCCccceeecCCCC-CCCcccccCcccccccccCCCchHHHHHHHHhhcCCC
Q 017562          168 GGYATWFSSKGSDPNLLVGAVVGGPDA-YDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHGG  231 (369)
Q Consensus       168 ~G~~~~~~~~~~np~vl~GAlVGGPd~-~D~f~D~r~~y~~nEvaid~NA~~vg~lA~l~~~~~~  231 (369)
                        |.++++.+.+|||+|+||||||||. +|+|.|+|.+|++|||||||||+||++||+|...+++
T Consensus       384 --~~~~~~~p~~~~~vl~GaLVGGP~~~~d~y~D~~~~y~~nEvai~~NA~lv~~lA~l~~~~~~  446 (605)
T 1tf4_A          384 --WTDSIASPAENRHVLYGALVGGPGSPNDAYTDDRQDYVANEVATDYNAGFSSALAMLVEEYGG  446 (605)
T ss_dssp             --SSSCTTSSSSCSSCCTTCBCCCCSSTTCCCCCCTTCTTTTCCCGGGGHHHHHHHHHHHHHHCC
T ss_pred             --ccccccCCccCCCCCcceEEeCCCCCcccccccccchhhcCCccccchHHHHHHHHHHHhcCC
Confidence              2345677889999999999999998 9999999999999999999999999999999988764
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A* Back     alignment and structure
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum} Back     alignment and structure
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A* Back     alignment and structure
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A Back     alignment and structure
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum} Back     alignment and structure
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A* Back     alignment and structure
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A* Back     alignment and structure
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 Back     alignment and structure
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus} Back     alignment and structure
>3ndz_E Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_E* Back     alignment and structure
>1exg_A EXO-1,4-beta-D-glycanase; cellulose binding domain, cellulose degradation; NMR {Cellulomonas fimi} SCOP: b.2.2.1 PDB: 1exh_A Back     alignment and structure
>2cwr_A Chitinase; chitin-binding domain, endoglucanase, hyperthermophilic, hydrolase; 1.70A {Pyrococcus furiosus} PDB: 2czn_A Back     alignment and structure
>1e5b_A Xylanase D; hydrolase, xylan binding domain, beta-sheet; NMR {Cellulomonas fimi} SCOP: b.2.2.1 PDB: 1e5c_A 1xbd_A 2xbd_A Back     alignment and structure
>1heh_C Endo-1,4-beta-xylanase D; hydrolase(xylan degradation), hydrolase, xylan binding domain, beta-sheet; NMR {Cellulomonas fimi} SCOP: b.2.2.1 PDB: 1hej_C Back     alignment and structure
>3ghp_A Cellulosomal scaffoldin adaptor protein B; linker segments, beta barrel, alpha helix, beta flaps, structural protein; 2.49A {Acetivibrio cellulolyticus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 369
d1tf4a1460 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E 1e-57
d1ut9a1511 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobios 7e-53
d1g87a1454 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E 8e-53
d1ks8a_433 a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasu 5e-50
d1ia6a_431 a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clos 2e-48
d1clca1441 a.102.1.2 (A:135-575) CelD cellulase, C-terminal d 7e-36
>d1tf4a1 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E-4, N-terminal domain {Thermomonospora fusca [TaxId: 2021]} Length = 460 Back     information, alignment and structure

class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Cellulases catalytic domain
domain: Endo/exocellulase:cellobiose E-4, N-terminal domain
species: Thermomonospora fusca [TaxId: 2021]

 Score =  192 bits (489), Expect = 1e-57
 Identities = 67/246 (27%), Positives = 100/246 (40%), Gaps = 38/246 (15%)

Query: 2   GGTGWGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCL-GKGSR 60
                      WD K  G   L+AK              ++Y   A  ++     G   +
Sbjct: 249 TDLRSYRWTIAWDDKSYGTYVLLAK----------ETGKQKYIDDANRWLDYWTVGVNGQ 298

Query: 61  NVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKS 120
            V  +PGG+     W  +++  + +F+A VY+  +    R                FA  
Sbjct: 299 RVPYSPGGMAVLDTWGALRYAANTAFVALVYAKVIDDPVR----------KQRYHDFAVR 348

Query: 121 QVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSD 180
           Q++Y LGDNPR +SY+VG+GNN P+  HHR +               G +    +S   +
Sbjct: 349 QINYALGDNPRNSSYVVGFGNNPPRNPHHRTAH--------------GSWTDSIASPAEN 394

Query: 181 PNLLVGAVVGGPDA-YDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHGGYNQLLPVI 239
            ++L GA+VGGP +  D + D R +Y   E AT  NA     LA L   +GG    L   
Sbjct: 395 RHVLYGALVGGPGSPNDAYTDDRQDYVANEVATDYNAGFSSALAMLVEEYGG--TPLADF 452

Query: 240 VPAATP 245
            P   P
Sbjct: 453 PPTEEP 458
>d1ut9a1 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobiosidase CbhA {Clostridium thermocellum [TaxId: 1515]} Length = 511 Back     information, alignment and structure
>d1g87a1 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E-4, N-terminal domain {Clostridium cellulolyticum, atcc 35319 [TaxId: 1521]} Length = 454 Back     information, alignment and structure
>d1ks8a_ a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasutitermes takasagoensis) [TaxId: 62960]} Length = 433 Back     information, alignment and structure
>d1ia6a_ a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clostridium cellulolyticum [TaxId: 1521]} Length = 431 Back     information, alignment and structure
>d1clca1 a.102.1.2 (A:135-575) CelD cellulase, C-terminal domain {Clostridium thermocellum [TaxId: 1515]} Length = 441 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query369
d1tf4a1460 Endo/exocellulase:cellobiose E-4, N-terminal domai 100.0
d1g87a1454 Endo/exocellulase:cellobiose E-4, N-terminal domai 100.0
d1ia6a_431 Nonprocessive cellulase Cel9M {Clostridium cellulo 100.0
d1ks8a_433 Endo-b-1,4-glucanase {Termite (Nasutitermes takasa 100.0
d1ut9a1511 Cellulose 1,4-beta-cellobiosidase CbhA {Clostridiu 100.0
d1clca1441 CelD cellulase, C-terminal domain {Clostridium the 100.0
d1exha_110 Exo-1,4-beta-D-glycanase (cellulase, xylanase), ce 99.03
d1hehc_88 Endo-1,4-beta xylanase D, xylan binding domain, XB 97.17
d1e5ba_87 Endo-1,4-beta xylanase D, xylan binding domain, XB 97.08
d1qbaa2173 Bacterial chitobiase, n-terminal domain {Serratia 85.61
>d1tf4a1 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E-4, N-terminal domain {Thermomonospora fusca [TaxId: 2021]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Cellulases catalytic domain
domain: Endo/exocellulase:cellobiose E-4, N-terminal domain
species: Thermomonospora fusca [TaxId: 2021]

Probab=100.00  E-value=5.4e-45  Score=369.48  Aligned_cols=189  Identities=33%  Similarity=0.539  Sum_probs=164.1

Q ss_pred             ceeecccchhHHHHHhhhhhccCCCCCchHHHHHHHHHHHHhhhhhcCC-CCCceeeCCCcceeccCCCcHHHHHHHHHH
Q 017562            9 TEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGK-GSRNVQKTPGGLIFRQRWNNMQFVTSASFL   87 (369)
Q Consensus         9 ~~fsWD~K~~gv~vLla~~~~~~~~~~~~~~~~~y~~~ae~~~c~~l~~-~~~~~~~TpgGl~~~~~Wgs~~y~an~Afl   87 (369)
                      ..|+||+|..++++||++...          .+++++.++.+++.++.. ....+.++|+|+.+...||++++++|.||+
T Consensus       256 ~~~~w~~~~~~~~~~la~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WGsn~~~~n~a~~  325 (460)
T d1tf4a1         256 WTIAWDDKSYGTYVLLAKETG----------KQKYIDDANRWLDYWTVGVNGQRVPYSPGGMAVLDTWGALRYAANTAFV  325 (460)
T ss_dssp             SCCSSSCCHHHHHHHHHHHHC----------CHHHHHHHHHHHHHTTTCBTTBCCCBCTTSCBCCCSSSHHHHHHHHHHH
T ss_pred             ccccccchhHHHHHHHHHHhh----------hhHHHHHHHHHHHHHhhhcccccCCcCCCcceecCCCchHHHHHHHHHH
Confidence            468999999999999998752          135667777777776654 345678999999999999999999999999


Q ss_pred             HHHHHHHhhhcCCccccCCCCCChHHHHHHHHhcchhhhCCCCCCceeEEeeCCCCCCCccccccccccccCCCCccccC
Q 017562           88 ATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCR  167 (369)
Q Consensus        88 ~~~ya~~l~~~~~~~~c~~~~~~~~~~~~~A~~QidYiLG~Np~~~SyvvG~G~~~P~~pHHR~ss~p~~~~~p~~~~C~  167 (369)
                      +++|++++...          .++.+|+++|++|||||||+||+++|||+|||.|+|+|||||.++|+.           
T Consensus       326 ~~~a~~~~~~~----------~~~~~y~~~A~~qldylLG~Np~~~SyVtG~G~~~p~~pHHR~s~~~~-----------  384 (460)
T d1tf4a1         326 ALVYAKVIDDP----------VRKQRYHDFAVRQINYALGDNPRNSSYVVGFGNNPPRNPHHRTAHGSW-----------  384 (460)
T ss_dssp             HHHHHHHCCCH----------HHHHHHHHHHHHHHHHHHTCSTTCCCSBTTSSSSCCSCCSCHHHHTCS-----------
T ss_pred             HHHHHHHhccc----------CCHHHHHHHHHHhhheecccCCCCcCCCccCCCCCCCCCcCccccCCC-----------
Confidence            99999875321          245799999999999999999999999999999999999999998753           


Q ss_pred             CCccccccCCCCCCCCccceeecCCC-CCCCcccccCcccccccccCCCchHHHHHHHHhhcCCC
Q 017562          168 GGYATWFSSKGSDPNLLVGAVVGGPD-AYDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHGG  231 (369)
Q Consensus       168 ~G~~~~~~~~~~np~vl~GAlVGGPd-~~D~f~D~r~~y~~nEvaid~NA~~vg~lA~l~~~~~~  231 (369)
                         .++...+.||||+|+|+|||||| .+|+|.|+|++|++|||||||||+||++||+|.+.+++
T Consensus       385 ---~~~~~~~~p~~~~l~G~lvGGPn~~~~~y~D~~~~y~~nEvai~~NA~lv~~la~l~~~~~~  446 (460)
T d1tf4a1         385 ---TDSIASPAENRHVLYGALVGGPGSPNDAYTDDRQDYVANEVATDYNAGFSSALAMLVEEYGG  446 (460)
T ss_dssp             ---SSCTTSSSSCSSCCTTCBCCCCSSTTCCCCCCTTCTTTTCCCGGGGHHHHHHHHHHHHHHCC
T ss_pred             ---ccccCCCCCCCCCcceeEecCCCCCCCCcCcCcchhhhhhhHHHHHHHHHHHHHHHHHhcCC
Confidence               23567788999999999999999 58999999999999999999999999999999988664
>d1g87a1 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E-4, N-terminal domain {Clostridium cellulolyticum, atcc 35319 [TaxId: 1521]} Back     information, alignment and structure
>d1ia6a_ a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clostridium cellulolyticum [TaxId: 1521]} Back     information, alignment and structure
>d1ks8a_ a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasutitermes takasagoensis) [TaxId: 62960]} Back     information, alignment and structure
>d1ut9a1 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobiosidase CbhA {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1clca1 a.102.1.2 (A:135-575) CelD cellulase, C-terminal domain {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1exha_ b.2.2.1 (A:) Exo-1,4-beta-D-glycanase (cellulase, xylanase), cellulose-binding domain, CBD {Cellulomonas fimi [TaxId: 1708]} Back     information, alignment and structure
>d1hehc_ b.2.2.1 (C:) Endo-1,4-beta xylanase D, xylan binding domain, XBD {Cellulomonas fimi [TaxId: 1708]} Back     information, alignment and structure
>d1e5ba_ b.2.2.1 (A:) Endo-1,4-beta xylanase D, xylan binding domain, XBD {Cellulomonas fimi [TaxId: 1708]} Back     information, alignment and structure
>d1qbaa2 b.2.2.3 (A:28-200) Bacterial chitobiase, n-terminal domain {Serratia marcescens [TaxId: 615]} Back     information, alignment and structure