Citrus Sinensis ID: 017607

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------37
MEGGEGKGLGCQKTMDGKESNKNGSAGAIPSCCLKARASAPELDAKCHSTVVSGWFSESQSTSDKTGKTMYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFLKREVSVLGDSPTPSQRICVS
cccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccEEEEccccccEEEEEEEEEEEEEcccccEEEEEEccccccEEEEcccEEEEccccHHHHHHcccccccccccccEEEEEcccccHHHHHHHccccccEEEEEEccHHHHHHHHHHcHHHccccccccEEEEEcHHHHHHHHcccccEEEEEEcccccccHHHHcccHHHHHHHHHHcccccEEEEccccccccHHHHHHHHHHHHccccccEEEcEEEEEccccHHHHHHHHccccccccccccccHHHHHHHHHccccccccccHHHHHHHHcccHHHHHHHHHcccccccccccccc
ccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccEEEEcccccccccEcEEEEEccccEEEEEEccEEEEEEEccccEEEEEEEcccEEEEEEccEEEEEcccHHHHHHHHHHHHHHHcccccEEEEEEccccHHHHHHHccccccEEEEEEccHHHHHHHHHHcHHHHccHHHcccEEEEEccHHHHHHcccccEEEEEEEccccEccccHHHcHHHHHHHHHHEEEEEEEEEEcccccccHHHHHHHHHHHHcccccEEEEEEEEcccccccEEEEEEEEccccccccccccccccHccHHHHcccccccccHHHHHHHHHHHHHHHHHHHcccccccccccEEcc
meggegkglgcqktmdgkesnkngsagaipscclkarasapeldakcHSTVVSgwfsesqstsdktgktmyfnnpmwpgeahsLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIahlplcsipspktvlvvgggdggvlreisrhdsvelidicEIDKMVIDVSKKyfpelavgfedprvrlhiGDAVEFlrqvprgkydaiivdssdpvgpaqelvekpfFDTIAKALrpggvlcnmAESMWLHTHLIEDMISICRETFkgsvhyawasvptypsgiIGFLIcstegphvdfvnpinpieklegadkHKRELRFYNSEIHSAAFALPAFLKREVsvlgdsptpsqricvs
meggegkglgcqktmdgkesnkngsaGAIPSCCLKARASAPELDAKCHSTVvsgwfsesqstsdktGKTMYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLplcsipspKTVLVVGGGDGGVLreisrhdsvelidiceIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAveflrqvpRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFLKREVSvlgdsptpsqricvs
MEGGEGKGLGCQKTMDGKESNKNGSAGAIPSCCLKARASAPELDAKCHSTVVSGWFSESQSTSDKTGKTMYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTvlvvgggdggvlREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFLKREVSVLGDSPTPSQRICVS
*******************************CCLKA******LDAKCHSTVVSGWF************TMYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFLKREVSV**************
************************************************STVVSGWFSESQSTSDKTGKTMYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFLKREVSVLGD*PTP**RICV*
********LGCQKTMDGKESNKNGSAGAIPSCCLKARASAPELDAKCHSTVVSGW**********TGKTMYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFLKREVSV**************
**********************************K**********KCHSTVVSGWFSESQSTSDKTGKTMYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFLKREVSVLG************
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MEGGEGKGLGCQKTMDGKESNKNGSAGAIPSCCLKARASAPELDAKCHSTVVSGWFSESQSTSDKTGKTMYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFLKREVSVLGDSPTPSQRICVS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query369 2.2.26 [Sep-21-2011]
Q94BN2359 Spermine synthase OS=Arab yes no 0.962 0.988 0.806 1e-161
O82147316 Spermidine synthase OS=Co N/A no 0.788 0.920 0.698 1e-129
O48659308 Spermidine synthase 2 OS= N/A no 0.788 0.944 0.675 1e-126
Q96556308 Spermidine synthase 1 OS= N/A no 0.799 0.957 0.660 1e-126
Q9ZTR1334 Spermidine synthase 1 OS= N/A no 0.788 0.871 0.666 1e-126
Q96557317 Spermidine synthase 2 OS= N/A no 0.810 0.943 0.662 1e-125
Q9SMB1323 Spermidine synthase 1 OS= no no 0.788 0.900 0.678 1e-125
Q9ZS45342 Spermidine synthase OS=So N/A no 0.796 0.859 0.673 1e-125
Q9ZUB3334 Spermidine synthase 1 OS= no no 0.848 0.937 0.616 1e-124
Q9ZTR0342 Spermidine synthase 2 OS= N/A no 0.785 0.847 0.665 1e-124
>sp|Q94BN2|SPSY_ARATH Spermine synthase OS=Arabidopsis thaliana GN=SPMS PE=1 SV=1 Back     alignment and function desciption
 Score =  569 bits (1466), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 288/357 (80%), Positives = 315/357 (88%), Gaps = 2/357 (0%)

Query: 1   MEGGEGKGLGCQKTMDGKESNKNGSAGAIPSCCLKARASAPELDAKCHSTVVSGWFSESQ 60
           MEG  G GL CQ TMDGK SN NG    +PSCCLKA A  PE DAKCHSTVVSGWFSE  
Sbjct: 1   MEGDVGIGLVCQNTMDGKASNGNGLEKTVPSCCLKAMACVPEDDAKCHSTVVSGWFSEPH 60

Query: 61  STSDKTG-KTMYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQ 119
             S K G K +YFNNPMWPGEAHSLKV+++LFK KS++QEVLVFES  YGKVLVLDGIVQ
Sbjct: 61  PRSGKKGGKAVYFNNPMWPGEAHSLKVEKVLFKDKSDFQEVLVFESATYGKVLVLDGIVQ 120

Query: 120 LTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVI 179
           LTEKDECAYQEMIAHLPLCSI SPK VLVVGGGDGGVLREISRH SVE+IDICEIDKMVI
Sbjct: 121 LTEKDECAYQEMIAHLPLCSISSPKNVLVVGGGDGGVLREISRHSSVEVIDICEIDKMVI 180

Query: 180 DVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPF 239
           DVSKK+FPELAVGF+DPRV+LHIGDA EFLR+ P GKYDAIIVDSSDPVGPA  LVEKPF
Sbjct: 181 DVSKKFFPELAVGFDDPRVQLHIGDAAEFLRKSPEGKYDAIIVDSSDPVGPALALVEKPF 240

Query: 240 FDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGF 299
           F+T+A+AL+PGGVLCNMAESMWLHTHLIEDMISICR+TFK SVHYAW+SVPTYPSG+IGF
Sbjct: 241 FETLARALKPGGVLCNMAESMWLHTHLIEDMISICRQTFK-SVHYAWSSVPTYPSGVIGF 299

Query: 300 LICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFLKREVSVL 356
           ++CSTEGP VDF NPINPIEKL+GA  HKREL+FYNS++H AAFALP FL+REV+ L
Sbjct: 300 VLCSTEGPAVDFKNPINPIEKLDGAMTHKRELKFYNSDMHRAAFALPTFLRREVASL 356

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 5EC: .EC: 1EC: .EC: 2EC: 2
>sp|O82147|SPDE_COFAR Spermidine synthase OS=Coffea arabica PE=2 SV=1 Back     alignment and function description
>sp|O48659|SPD2_HYONI Spermidine synthase 2 OS=Hyoscyamus niger PE=2 SV=1 Back     alignment and function description
>sp|Q96556|SPD1_DATST Spermidine synthase 1 OS=Datura stramonium PE=2 SV=1 Back     alignment and function description
>sp|Q9ZTR1|SPD1_PEA Spermidine synthase 1 OS=Pisum sativum GN=SPDSYN1 PE=2 SV=1 Back     alignment and function description
>sp|Q96557|SPD2_DATST Spermidine synthase 2 OS=Datura stramonium PE=2 SV=1 Back     alignment and function description
>sp|Q9SMB1|SPD1_ORYSJ Spermidine synthase 1 OS=Oryza sativa subsp. japonica GN=SPDSYN1 PE=2 SV=1 Back     alignment and function description
>sp|Q9ZS45|SPDE_SOLLC Spermidine synthase OS=Solanum lycopersicum GN=SPDSYN PE=2 SV=1 Back     alignment and function description
>sp|Q9ZUB3|SPD1_ARATH Spermidine synthase 1 OS=Arabidopsis thaliana GN=SPDSYN1 PE=1 SV=1 Back     alignment and function description
>sp|Q9ZTR0|SPD2_PEA Spermidine synthase 2 OS=Pisum sativum GN=SPDSYN2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query369
225462753369 PREDICTED: spermine synthase [Vitis vini 1.0 1.0 0.842 1e-176
255545020368 spermidine synthase 1, putative [Ricinus 0.997 1.0 0.859 1e-176
147767804369 hypothetical protein VITISV_020278 [Viti 1.0 1.0 0.842 1e-175
224120662347 predicted protein [Populus trichocarpa] 0.932 0.991 0.866 1e-171
302143671355 unnamed protein product [Vitis vinifera] 0.962 1.0 0.847 1e-170
126153733361 spermine synthase [Lotus japonicus] 0.970 0.991 0.840 1e-170
449456381365 PREDICTED: spermine synthase-like [Cucum 0.989 1.0 0.813 1e-170
357463867358 Spermidine synthase [Medicago truncatula 0.948 0.977 0.84 1e-169
73486701369 spermine synthase [Malus sylvestris] 0.991 0.991 0.808 1e-169
363808324362 uncharacterized protein LOC100816988 [Gl 0.970 0.988 0.837 1e-168
>gi|225462753|ref|XP_002270790.1| PREDICTED: spermine synthase [Vitis vinifera] Back     alignment and taxonomy information
 Score =  623 bits (1606), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 311/369 (84%), Positives = 337/369 (91%)

Query: 1   MEGGEGKGLGCQKTMDGKESNKNGSAGAIPSCCLKARASAPELDAKCHSTVVSGWFSESQ 60
           MEGG GKGL C K MDGK SN  G   AIPSCCLKA+ASAPE DAKCHSTVVSGWFSE Q
Sbjct: 1   MEGGAGKGLECPKIMDGKASNGKGLKKAIPSCCLKAKASAPENDAKCHSTVVSGWFSEPQ 60

Query: 61  STSDKTGKTMYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQL 120
           S SDK G  MYFNNPMWPGEAHSLKV+ ILF+GKSE+QE+LVFES AYGKVLVLDGIVQL
Sbjct: 61  SCSDKAGNLMYFNNPMWPGEAHSLKVENILFQGKSEFQEILVFESSAYGKVLVLDGIVQL 120

Query: 121 TEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVID 180
           +EKDECAYQEMIAHLPLCSI SPK VLVVGGGDGGVLREISRH SVELIDICEIDKMVID
Sbjct: 121 SEKDECAYQEMIAHLPLCSIESPKRVLVVGGGDGGVLREISRHSSVELIDICEIDKMVID 180

Query: 181 VSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFF 240
           V KK+FP+L VGFEDPRV+LH+GDAVEFLR VP GKYDAIIVDSSDPVGPAQELVE+PFF
Sbjct: 181 VCKKFFPQLYVGFEDPRVQLHVGDAVEFLRHVPEGKYDAIIVDSSDPVGPAQELVERPFF 240

Query: 241 DTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFL 300
           +T A+ALRPGGVLCNMAESMWLHTHLI+DM+SICRETFKGSVHYAWASVPTYPSG+IGFL
Sbjct: 241 ETTARALRPGGVLCNMAESMWLHTHLIQDMLSICRETFKGSVHYAWASVPTYPSGVIGFL 300

Query: 301 ICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFLKREVSVLGDSP 360
           +CSTEGP VDF++P+NPIEKLEG  K  RELRFYNSEIHSAAFALP+F++REVS+L +SP
Sbjct: 301 LCSTEGPPVDFLHPVNPIEKLEGNLKCGRELRFYNSEIHSAAFALPSFVRREVSILHNSP 360

Query: 361 TPSQRICVS 369
           TP+QRICVS
Sbjct: 361 TPAQRICVS 369

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255545020|ref|XP_002513571.1| spermidine synthase 1, putative [Ricinus communis] gi|223547479|gb|EEF48974.1| spermidine synthase 1, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|147767804|emb|CAN73402.1| hypothetical protein VITISV_020278 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224120662|ref|XP_002318386.1| predicted protein [Populus trichocarpa] gi|222859059|gb|EEE96606.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|302143671|emb|CBI22532.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|126153733|emb|CAM35498.1| spermine synthase [Lotus japonicus] Back     alignment and taxonomy information
>gi|449456381|ref|XP_004145928.1| PREDICTED: spermine synthase-like [Cucumis sativus] gi|449497322|ref|XP_004160371.1| PREDICTED: spermine synthase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|357463867|ref|XP_003602215.1| Spermidine synthase [Medicago truncatula] gi|355491263|gb|AES72466.1| Spermidine synthase [Medicago truncatula] Back     alignment and taxonomy information
>gi|73486701|dbj|BAE19758.1| spermine synthase [Malus sylvestris] Back     alignment and taxonomy information
>gi|363808324|ref|NP_001242248.1| uncharacterized protein LOC100816988 [Glycine max] gi|255635898|gb|ACU18296.1| unknown [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query369
TAIR|locus:2016129340 SPDS2 "spermidine synthase 2" 0.802 0.870 0.6 7.7e-103
DICTYBASE|DDB_G0268630284 spsA "Spermidine synthase" [Di 0.728 0.947 0.444 7.4e-66
POMBASE|SPBC12C2.07c298 SPBC12C2.07c "spermidine synth 0.753 0.932 0.465 9.4e-66
MGI|MGI:102690302 Srm "spermidine synthase" [Mus 0.739 0.903 0.451 1.2e-65
ASPGD|ASPL0000062169292 spdA [Emericella nidulans (tax 0.766 0.969 0.444 1.5e-65
UNIPROTKB|P19623302 SRM "Spermidine synthase" [Hom 0.739 0.903 0.444 2e-65
GENEDB_PFALCIPARUM|PF11_0301321 PF11_0301 "spermidine synthase 0.728 0.838 0.496 3.2e-65
UNIPROTKB|Q8II73321 PF11_0301 "Spermidine synthase 0.728 0.838 0.496 3.2e-65
RGD|620796302 Srm "spermidine synthase" [Rat 0.739 0.903 0.444 5.2e-65
CGD|CAL0006284297 SPE3 [Candida albicans (taxid: 0.761 0.946 0.437 2.3e-64
TAIR|locus:2016129 SPDS2 "spermidine synthase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1019 (363.8 bits), Expect = 7.7e-103, P = 7.7e-103
 Identities = 186/310 (60%), Positives = 238/310 (76%)

Query:    44 DAKCHSTVVSGWFSESQSTSDKTGKTMYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVF 103
             +  C S+++ GWFSE               +PMWPGEAHSLKV++ILF+GKS+YQ+V+VF
Sbjct:    40 EPSCMSSIIPGWFSEI--------------SPMWPGEAHSLKVEKILFQGKSDYQDVIVF 85

Query:   104 ESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRH 163
             +S  YGKVLVLDG++QLTE+DECAYQEMI HLPLCSI +PK             RE++RH
Sbjct:    86 QSATYGKVLVLDGVIQLTERDECAYQEMITHLPLCSISNPKKVLVIGGGDGGVLREVARH 145

Query:   164 DSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVD 223
              SVE IDICEIDKMV+DV+K+YFP +AVG+EDPRV L IGD V FL+    G YDA+IVD
Sbjct:   146 SSVEQIDICEIDKMVVDVAKQYFPNVAVGYEDPRVNLIIGDGVAFLKNAAEGTYDAVIVD 205

Query:   224 SSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKGSVH 283
             SSDP+GPA+EL EKPFF+++ +ALRPGGV+C  AES+WLH  +IED++S CR+ FKGSV+
Sbjct:   206 SSDPIGPAKELFEKPFFESVNRALRPGGVVCTQAESLWLHMDIIEDIVSNCRDIFKGSVN 265

Query:   284 YAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAF 343
             YAW SVPTYPSG+IGF++CS+EGP VDF  P++ I+  E + K    L++YN+EIHSAAF
Sbjct:   266 YAWTSVPTYPSGVIGFMLCSSEGPQVDFKKPVSLIDTDESSIKSHCPLKYYNAEIHSAAF 325

Query:   344 ALPAFLKREV 353
              LP+F K+ +
Sbjct:   326 CLPSFAKKVI 335
GO:0003824 "catalytic activity" evidence=IEA
GO:0005634 "nucleus" evidence=ISM
GO:0004766 "spermidine synthase activity" evidence=IDA
GO:0008295 "spermidine biosynthetic process" evidence=RCA;IDA
GO:0005515 "protein binding" evidence=IPI
GO:0005886 "plasma membrane" evidence=IDA
GO:0000096 "sulfur amino acid metabolic process" evidence=RCA
GO:0008652 "cellular amino acid biosynthetic process" evidence=RCA
GO:0009069 "serine family amino acid metabolic process" evidence=RCA
GO:0009616 "virus induced gene silencing" evidence=RCA
GO:0010050 "vegetative phase change" evidence=RCA
GO:0042545 "cell wall modification" evidence=RCA
DICTYBASE|DDB_G0268630 spsA "Spermidine synthase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
POMBASE|SPBC12C2.07c SPBC12C2.07c "spermidine synthase (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
MGI|MGI:102690 Srm "spermidine synthase" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
ASPGD|ASPL0000062169 spdA [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
UNIPROTKB|P19623 SRM "Spermidine synthase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
GENEDB_PFALCIPARUM|PF11_0301 PF11_0301 "spermidine synthase" [Plasmodium falciparum (taxid:5833)] Back     alignment and assigned GO terms
UNIPROTKB|Q8II73 PF11_0301 "Spermidine synthase" [Plasmodium falciparum 3D7 (taxid:36329)] Back     alignment and assigned GO terms
RGD|620796 Srm "spermidine synthase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
CGD|CAL0006284 SPE3 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q96557SPD2_DATST2, ., 5, ., 1, ., 1, 60.66240.81020.9432N/Ano
Q94BN2SPSY_ARATH2, ., 5, ., 1, ., 2, 20.80670.96200.9888yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer2.5.1.22LOW CONFIDENCE prediction!
4th Layer2.5.1.160.946
3rd Layer2.5.10.983

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query369
PLN02366308 PLN02366, PLN02366, spermidine synthase 0.0
PRK00811283 PRK00811, PRK00811, spermidine synthase; Provision 1e-113
pfam01564240 pfam01564, Spermine_synth, Spermine/spermidine syn 1e-109
TIGR00417271 TIGR00417, speE, spermidine synthase 1e-102
COG0421282 COG0421, SpeE, Spermidine synthase [Amino acid tra 1e-101
PLN02823336 PLN02823, PLN02823, spermine synthase 1e-53
PRK03612521 PRK03612, PRK03612, spermidine synthase; Provision 2e-29
COG4262508 COG4262, COG4262, Predicted spermidine synthase wi 5e-28
PRK01581374 PRK01581, speE, spermidine synthase; Validated 4e-24
PRK00536262 PRK00536, speE, spermidine synthase; Provisional 3e-18
cd02440107 cd02440, AdoMet_MTases, S-adenosylmethionine-depen 3e-12
PRK04457262 PRK04457, PRK04457, spermidine synthase; Provision 7e-12
pfam13659117 pfam13659, Methyltransf_26, Methyltransferase doma 2e-10
pfam12847104 pfam12847, Methyltransf_18, Methyltransferase doma 1e-06
COG2521287 COG2521, COG2521, Predicted archaeal methyltransfe 4e-06
pfam13578105 pfam13578, Methyltransf_24, Methyltransferase doma 2e-05
COG4122219 COG4122, COG4122, Predicted O-methyltransferase [G 9e-05
pfam05430124 pfam05430, Methyltransf_30, S-adenosyl-L-methionin 1e-04
pfam11899376 pfam11899, DUF3419, Protein of unknown function (D 0.002
pfam05175170 pfam05175, MTS, Methyltransferase small domain 0.002
pfam0824298 pfam08242, Methyltransf_12, Methyltransferase doma 0.003
>gnl|CDD|215208 PLN02366, PLN02366, spermidine synthase Back     alignment and domain information 
 Score =  605 bits (1562), Expect = 0.0
 Identities = 234/319 (73%), Positives = 273/319 (85%), Gaps = 14/319 (4%)

Query: 38  ASAPELDAKCHSTVVSGWFSESQSTSDKTGKTMYFNNPMWPGEAHSLKVKEILFKGKSEY 97
           A+APE +AKCHSTV+ GWFSE               +PMWPGEAHSLKV+++LF+GKS++
Sbjct: 1   AAAPESEAKCHSTVIPGWFSEI--------------SPMWPGEAHSLKVEKVLFQGKSDF 46

Query: 98  QEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVL 157
           Q+VLVFES  YGKVLVLDG++QLTE+DECAYQEMI HLPLCSIP+PK VLVVGGGDGGVL
Sbjct: 47  QDVLVFESATYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVVGGGDGGVL 106

Query: 158 REISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKY 217
           REI+RH SVE IDICEIDKMVIDVSKK+FP+LAVGF+DPRV LHIGD VEFL+  P G Y
Sbjct: 107 REIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIGDGVEFLKNAPEGTY 166

Query: 218 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRET 277
           DAIIVDSSDPVGPAQEL EKPFF+++A+ALRPGGV+C  AESMWLH  LIED+I+ICRET
Sbjct: 167 DAIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQAESMWLHMDLIEDLIAICRET 226

Query: 278 FKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSE 337
           FKGSV+YAW +VPTYPSG+IGF++CS EGP VDF +P+NPI+KLEGA K KR L+FYNSE
Sbjct: 227 FKGSVNYAWTTVPTYPSGVIGFVLCSKEGPAVDFKHPVNPIDKLEGAGKAKRPLKFYNSE 286

Query: 338 IHSAAFALPAFLKREVSVL 356
           +H AAF LP+F KRE+  L
Sbjct: 287 VHRAAFCLPSFAKRELESL 305

Length = 308
>gnl|CDD|234843 PRK00811, PRK00811, spermidine synthase; Provisional Back     alignment and domain information
>gnl|CDD|216573 pfam01564, Spermine_synth, Spermine/spermidine synthase Back     alignment and domain information
>gnl|CDD|188048 TIGR00417, speE, spermidine synthase Back     alignment and domain information
>gnl|CDD|223498 COG0421, SpeE, Spermidine synthase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|178418 PLN02823, PLN02823, spermine synthase Back     alignment and domain information
>gnl|CDD|235139 PRK03612, PRK03612, spermidine synthase; Provisional Back     alignment and domain information
>gnl|CDD|226713 COG4262, COG4262, Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only] Back     alignment and domain information
>gnl|CDD|234961 PRK01581, speE, spermidine synthase; Validated Back     alignment and domain information
>gnl|CDD|134311 PRK00536, speE, spermidine synthase; Provisional Back     alignment and domain information
>gnl|CDD|100107 cd02440, AdoMet_MTases, S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy) Back     alignment and domain information
>gnl|CDD|179854 PRK04457, PRK04457, spermidine synthase; Provisional Back     alignment and domain information
>gnl|CDD|222295 pfam13659, Methyltransf_26, Methyltransferase domain Back     alignment and domain information
>gnl|CDD|221804 pfam12847, Methyltransf_18, Methyltransferase domain Back     alignment and domain information
>gnl|CDD|225319 COG2521, COG2521, Predicted archaeal methyltransferase [General function prediction only] Back     alignment and domain information
>gnl|CDD|222236 pfam13578, Methyltransf_24, Methyltransferase domain Back     alignment and domain information
>gnl|CDD|226607 COG4122, COG4122, Predicted O-methyltransferase [General function prediction only] Back     alignment and domain information
>gnl|CDD|203249 pfam05430, Methyltransf_30, S-adenosyl-L-methionine-dependent methyltransferase Back     alignment and domain information
>gnl|CDD|221301 pfam11899, DUF3419, Protein of unknown function (DUF3419) Back     alignment and domain information
>gnl|CDD|203189 pfam05175, MTS, Methyltransferase small domain Back     alignment and domain information
>gnl|CDD|219760 pfam08242, Methyltransf_12, Methyltransferase domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 369
PLN02366308 spermidine synthase 100.0
KOG1562337 consensus Spermidine synthase [Amino acid transpor 100.0
PRK00536262 speE spermidine synthase; Provisional 100.0
PRK00811283 spermidine synthase; Provisional 100.0
COG0421282 SpeE Spermidine synthase [Amino acid transport and 100.0
PLN02823336 spermine synthase 100.0
TIGR00417270 speE spermidine synthase. the SpeE subunit of sper 100.0
PF01564246 Spermine_synth: Spermine/spermidine synthase; Inte 100.0
PRK03612521 spermidine synthase; Provisional 100.0
PRK01581374 speE spermidine synthase; Validated 100.0
COG4262508 Predicted spermidine synthase with an N-terminal m 100.0
PRK04457262 spermidine synthase; Provisional 99.92
COG2521287 Predicted archaeal methyltransferase [General func 99.65
PF12847112 Methyltransf_18: Methyltransferase domain; PDB: 3G 99.61
TIGR03533284 L3_gln_methyl protein-(glutamine-N5) methyltransfe 99.6
PRK14966423 unknown domain/N5-glutamine S-adenosyl-L-methionin 99.58
PRK11805307 N5-glutamine S-adenosyl-L-methionine-dependent met 99.54
PRK01544 506 bifunctional N5-glutamine S-adenosyl-L-methionine- 99.54
PF13659117 Methyltransf_26: Methyltransferase domain; PDB: 3G 99.53
TIGR00536284 hemK_fam HemK family putative methylases. The gene 99.51
TIGR00091194 tRNA (guanine-N(7)-)-methyltransferase. In E. coli 99.48
PF05175170 MTS: Methyltransferase small domain; InterPro: IPR 99.47
PRK00121202 trmB tRNA (guanine-N(7)-)-methyltransferase; Revie 99.47
COG4123248 Predicted O-methyltransferase [General function pr 99.46
TIGR02752231 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone me 99.4
COG2226238 UbiE Methylase involved in ubiquinone/menaquinone 99.4
COG4122219 Predicted O-methyltransferase [General function pr 99.4
PLN02476278 O-methyltransferase 99.4
TIGR03704251 PrmC_rel_meth putative protein-(glutamine-N5) meth 99.38
PF13847152 Methyltransf_31: Methyltransferase domain; PDB: 3T 99.38
TIGR00138181 gidB 16S rRNA methyltransferase GidB. GidB (glucos 99.38
COG2890280 HemK Methylase of polypeptide chain release factor 99.37
PRK14121390 tRNA (guanine-N(7)-)-methyltransferase; Provisiona 99.37
COG4106257 Tam Trans-aconitate methyltransferase [General fun 99.37
PLN02781234 Probable caffeoyl-CoA O-methyltransferase 99.36
PRK15451247 tRNA cmo(5)U34 methyltransferase; Provisional 99.36
PRK09328275 N5-glutamine S-adenosyl-L-methionine-dependent met 99.35
PF01596205 Methyltransf_3: O-methyltransferase; InterPro: IPR 99.35
PRK00107187 gidB 16S rRNA methyltransferase GidB; Reviewed 99.35
TIGR02469124 CbiT precorrin-6Y C5,15-methyltransferase (decarbo 99.34
PF0824195 Methyltransf_11: Methyltransferase domain; InterPr 99.34
PF01209233 Ubie_methyltran: ubiE/COQ5 methyltransferase famil 99.34
PRK15001378 SAM-dependent 23S ribosomal RNA mG1835 methyltrans 99.34
TIGR03534251 RF_mod_PrmC protein-(glutamine-N5) methyltransfera 99.32
PRK15128396 23S rRNA m(5)C1962 methyltransferase; Provisional 99.32
PRK08287187 cobalt-precorrin-6Y C(15)-methyltransferase; Valid 99.32
PRK01683258 trans-aconitate 2-methyltransferase; Provisional 99.32
PRK11036255 putative S-adenosyl-L-methionine-dependent methylt 99.3
PRK09489342 rsmC 16S ribosomal RNA m2G1207 methyltransferase; 99.29
PLN02233261 ubiquinone biosynthesis methyltransferase 99.27
PLN02244340 tocopherol O-methyltransferase 99.27
PRK14103255 trans-aconitate 2-methyltransferase; Provisional 99.27
TIGR00740239 methyltransferase, putative. A simple BLAST search 99.27
COG2230283 Cfa Cyclopropane fatty acid synthase and related m 99.27
PF13649101 Methyltransf_25: Methyltransferase domain; PDB: 3B 99.26
PRK00377198 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; 99.26
COG2242187 CobL Precorrin-6B methylase 2 [Coenzyme metabolism 99.26
PF02390195 Methyltransf_4: Putative methyltransferase ; Inter 99.25
PF02353273 CMAS: Mycolic acid cyclopropane synthetase; InterP 99.25
PRK00517250 prmA ribosomal protein L11 methyltransferase; Revi 99.24
PRK07402196 precorrin-6B methylase; Provisional 99.23
PRK14967223 putative methyltransferase; Provisional 99.23
COG2813300 RsmC 16S RNA G1207 methylase RsmC [Translation, ri 99.22
TIGR00537179 hemK_rel_arch HemK-related putative methylase. The 99.22
PRK13944205 protein-L-isoaspartate O-methyltransferase; Provis 99.22
PRK04266226 fibrillarin; Provisional 99.22
PRK11207197 tellurite resistance protein TehB; Provisional 99.22
TIGR00080215 pimt protein-L-isoaspartate(D-aspartate) O-methylt 99.22
TIGR02072240 BioC biotin biosynthesis protein BioC. This enzyme 99.21
PRK13942212 protein-L-isoaspartate O-methyltransferase; Provis 99.21
COG1092393 Predicted SAM-dependent methyltransferases [Genera 99.21
PTZ00098263 phosphoethanolamine N-methyltransferase; Provision 99.21
PLN02589247 caffeoyl-CoA O-methyltransferase 99.2
COG0220227 Predicted S-adenosylmethionine-dependent methyltra 99.2
COG2519256 GCD14 tRNA(1-methyladenosine) methyltransferase an 99.19
PF0824299 Methyltransf_12: Methyltransferase domain; InterPr 99.19
COG2518209 Pcm Protein-L-isoaspartate carboxylmethyltransfera 99.19
PLN03075296 nicotianamine synthase; Provisional 99.18
smart00828224 PKS_MT Methyltransferase in polyketide synthase (P 99.17
TIGR00406288 prmA ribosomal protein L11 methyltransferase. Ribo 99.17
COG2227243 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4- 99.17
PLN02396322 hexaprenyldihydroxybenzoate methyltransferase 99.16
PRK10909199 rsmD 16S rRNA m(2)G966-methyltransferase; Provisio 99.16
PF05401201 NodS: Nodulation protein S (NodS); InterPro: IPR00 99.15
PF06325295 PrmA: Ribosomal protein L11 methyltransferase (Prm 99.15
PRK11873272 arsM arsenite S-adenosylmethyltransferase; Reviewe 99.15
TIGR00477195 tehB tellurite resistance protein TehB. Part of a 99.14
PRK10258251 biotin biosynthesis protein BioC; Provisional 99.14
PRK11783702 rlmL 23S rRNA m(2)G2445 methyltransferase; Provisi 99.13
PF01135209 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl 99.12
PRK11188209 rrmJ 23S rRNA methyltransferase J; Provisional 99.12
PLN02490340 MPBQ/MSBQ methyltransferase 99.12
PLN02336475 phosphoethanolamine N-methyltransferase 99.11
PLN02672 1082 methionine S-methyltransferase 99.09
PRK06922677 hypothetical protein; Provisional 99.09
COG2264300 PrmA Ribosomal protein L11 methylase [Translation, 99.08
PRK14968188 putative methyltransferase; Provisional 99.08
PRK08317241 hypothetical protein; Provisional 99.08
PRK12335287 tellurite resistance protein TehB; Provisional 99.07
PRK11088272 rrmA 23S rRNA methyltransferase A; Provisional 99.07
KOG1271227 consensus Methyltransferases [General function pre 99.05
TIGR01177329 conserved hypothetical protein TIGR01177. This fam 99.04
PF08704247 GCD14: tRNA methyltransferase complex GCD14 subuni 99.04
PHA03411279 putative methyltransferase; Provisional 99.04
PRK10901427 16S rRNA methyltransferase B; Provisional 99.04
PRK00216239 ubiE ubiquinone/menaquinone biosynthesis methyltra 99.03
PRK11705383 cyclopropane fatty acyl phospholipid synthase; Pro 99.03
TIGR03587204 Pse_Me-ase pseudaminic acid biosynthesis-associate 99.03
KOG1540296 consensus Ubiquinone biosynthesis methyltransferas 99.03
TIGR00438188 rrmJ cell division protein FtsJ. 99.02
TIGR01934223 MenG_MenH_UbiE ubiquinone/menaquinone biosynthesis 99.01
PRK14902444 16S rRNA methyltransferase B; Provisional 99.01
PRK00312212 pcm protein-L-isoaspartate O-methyltransferase; Re 99.01
PF10672286 Methyltrans_SAM: S-adenosylmethionine-dependent me 99.01
TIGR02716306 C20_methyl_CrtF C-20 methyltransferase BchU. Membe 99.01
PRK14904445 16S rRNA methyltransferase B; Provisional 99.0
KOG1270282 consensus Methyltransferases [Coenzyme transport a 99.0
TIGR00446264 nop2p NOL1/NOP2/sun family putative RNA methylase. 99.0
TIGR00095189 RNA methyltransferase, RsmD family. This model rep 98.99
PRK13943322 protein-L-isoaspartate O-methyltransferase; Provis 98.98
cd02440107 AdoMet_MTases S-adenosylmethionine-dependent methy 98.97
smart00650169 rADc Ribosomal RNA adenine dimethylases. 98.96
PRK15068322 tRNA mo(5)U34 methyltransferase; Provisional 98.96
PHA03412241 putative methyltransferase; Provisional 98.95
PTZ00146293 fibrillarin; Provisional 98.95
TIGR02021219 BchM-ChlM magnesium protoporphyrin O-methyltransfe 98.95
PRK14903431 16S rRNA methyltransferase B; Provisional 98.94
TIGR00563426 rsmB ribosomal RNA small subunit methyltransferase 98.94
PLN02336 475 phosphoethanolamine N-methyltransferase 98.94
TIGR03438301 probable methyltransferase. This model represents 98.93
KOG2904328 consensus Predicted methyltransferase [General fun 98.93
PRK14901434 16S rRNA methyltransferase B; Provisional 98.93
PF03848192 TehB: Tellurite resistance protein TehB; InterPro: 98.92
KOG2899288 consensus Predicted methyltransferase [General fun 98.91
TIGR00452314 methyltransferase, putative. Known examples to dat 98.91
PF03602183 Cons_hypoth95: Conserved hypothetical protein 95; 98.91
PRK05785226 hypothetical protein; Provisional 98.9
KOG2352482 consensus Predicted spermine/spermidine synthase [ 98.89
PRK01544506 bifunctional N5-glutamine S-adenosyl-L-methionine- 98.89
KOG3010261 consensus Methyltransferase [General function pred 98.88
TIGR03840213 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d 98.87
PRK05134233 bifunctional 3-demethylubiquinone-9 3-methyltransf 98.87
PF13489161 Methyltransf_23: Methyltransferase domain; PDB: 3J 98.85
PRK13168443 rumA 23S rRNA m(5)U1939 methyltransferase; Reviewe 98.84
COG2263198 Predicted RNA methylase [Translation, ribosomal st 98.84
TIGR01983224 UbiG ubiquinone biosynthesis O-methyltransferase. 98.83
PRK06202232 hypothetical protein; Provisional 98.83
TIGR00479431 rumA 23S rRNA (uracil-5-)-methyltransferase RumA. 98.81
smart00138264 MeTrc Methyltransferase, chemotaxis proteins. Meth 98.81
KOG4300252 consensus Predicted methyltransferase [General fun 98.81
PRK07580230 Mg-protoporphyrin IX methyl transferase; Validated 98.79
PRK03522315 rumB 23S rRNA methyluridine methyltransferase; Rev 98.79
PRK04338 382 N(2),N(2)-dimethylguanosine tRNA methyltransferase 98.78
TIGR02085374 meth_trns_rumB 23S rRNA (uracil-5-)-methyltransfer 98.78
PRK13255218 thiopurine S-methyltransferase; Reviewed 98.78
PLN02585315 magnesium protoporphyrin IX methyltransferase 98.77
PF07021193 MetW: Methionine biosynthesis protein MetW; InterP 98.74
PF02475200 Met_10: Met-10+ like-protein; InterPro: IPR003402 98.73
KOG1663237 consensus O-methyltransferase [Secondary metabolit 98.73
PRK05031362 tRNA (uracil-5-)-methyltransferase; Validated 98.7
TIGR02143353 trmA_only tRNA (uracil-5-)-methyltransferase. This 98.68
COG0742187 N6-adenine-specific methylase [DNA replication, re 98.68
PF05891218 Methyltransf_PK: AdoMet dependent proline di-methy 98.67
PF00891241 Methyltransf_2: O-methyltransferase; InterPro: IPR 98.66
COG3963194 Phospholipid N-methyltransferase [Lipid metabolism 98.61
COG4976287 Predicted methyltransferase (contains TPR repeat) 98.61
TIGR00308 374 TRM1 tRNA(guanine-26,N2-N2) methyltransferase. Thi 98.6
PRK11727321 23S rRNA mA1618 methyltransferase; Provisional 98.59
TIGR02081194 metW methionine biosynthesis protein MetW. This pr 98.53
PTZ00338294 dimethyladenosine transferase-like protein; Provis 98.51
PRK11933 470 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF; 98.51
COG2520341 Predicted methyltransferase [General function pred 98.5
PRK13256226 thiopurine S-methyltransferase; Reviewed 98.49
KOG1541270 consensus Predicted protein carboxyl methylase [Ge 98.48
PF05185448 PRMT5: PRMT5 arginine-N-methyltransferase; InterPr 98.47
PF09445163 Methyltransf_15: RNA cap guanine-N2 methyltransfer 98.45
PRK14896258 ksgA 16S ribosomal RNA methyltransferase KsgA/Dim1 98.45
PF10294173 Methyltransf_16: Putative methyltransferase; Inter 98.44
KOG1661237 consensus Protein-L-isoaspartate(D-aspartate) O-me 98.41
KOG1709271 consensus Guanidinoacetate methyltransferase and r 98.4
PF01170179 UPF0020: Putative RNA methylase family UPF0020; In 98.39
PRK00274272 ksgA 16S ribosomal RNA methyltransferase KsgA/Dim1 98.38
KOG3191209 consensus Predicted N6-DNA-methyltransferase [Tran 98.37
COG1041347 Predicted DNA modification methylase [DNA replicat 98.37
PF05724218 TPMT: Thiopurine S-methyltransferase (TPMT); Inter 98.36
PF03291331 Pox_MCEL: mRNA capping enzyme; InterPro: IPR004971 98.32
TIGR00755253 ksgA dimethyladenosine transferase. Alternate name 98.31
PF08003315 Methyltransf_9: Protein of unknown function (DUF16 98.3
COG0030259 KsgA Dimethyladenosine transferase (rRNA methylati 98.29
PF02527184 GidB: rRNA small subunit methyltransferase G; Inte 98.21
PF05219265 DREV: DREV methyltransferase; InterPro: IPR007884 98.16
PRK00050296 16S rRNA m(4)C1402 methyltranserfase; Provisional 98.16
TIGR02987 524 met_A_Alw26 type II restriction m6 adenine DNA met 98.13
PF13578106 Methyltransf_24: Methyltransferase domain; PDB: 3S 98.12
KOG1975389 consensus mRNA cap methyltransferase [RNA processi 98.1
PLN02232160 ubiquinone biosynthesis methyltransferase 98.1
PF01728181 FtsJ: FtsJ-like methyltransferase; InterPro: IPR00 98.08
COG2265432 TrmA SAM-dependent methyltransferases related to t 98.07
PF02384311 N6_Mtase: N-6 DNA Methylase; InterPro: IPR003356 T 98.05
PF05430124 Methyltransf_30: S-adenosyl-L-methionine-dependent 98.05
KOG2361264 consensus Predicted methyltransferase [General fun 98.04
PRK11783 702 rlmL 23S rRNA m(2)G2445 methyltransferase; Provisi 98.04
TIGR00478228 tly hemolysin TlyA family protein. Hemolysins are 98.04
COG0144355 Sun tRNA and rRNA cytosine-C5-methylases [Translat 98.02
KOG2940325 consensus Predicted methyltransferase [General fun 98.02
COG4076252 Predicted RNA methylase [General function predicti 97.99
PF05958352 tRNA_U5-meth_tr: tRNA (Uracil-5-)-methyltransferas 97.98
KOG3420185 consensus Predicted RNA methylase [Translation, ri 97.97
KOG1499346 consensus Protein arginine N-methyltransferase PRM 97.96
PRK01747 662 mnmC bifunctional tRNA (mnm(5)s(2)U34)-methyltrans 97.95
KOG0820315 consensus Ribosomal RNA adenine dimethylase [RNA p 97.94
COG0293205 FtsJ 23S rRNA methylase [Translation, ribosomal st 97.92
PF03059276 NAS: Nicotianamine synthase protein; InterPro: IPR 97.87
PF12147311 Methyltransf_20: Putative methyltransferase; Inter 97.86
COG0357215 GidB Predicted S-adenosylmethionine-dependent meth 97.81
PF06080204 DUF938: Protein of unknown function (DUF938); Inte 97.79
KOG2915314 consensus tRNA(1-methyladenosine) methyltransferas 97.79
PF01861243 DUF43: Protein of unknown function DUF43; InterPro 97.79
PF01189283 Nol1_Nop2_Fmu: NOL1/NOP2/sun family; InterPro: IPR 97.78
PRK10742250 putative methyltransferase; Provisional 97.73
KOG1500 517 consensus Protein arginine N-methyltransferase CAR 97.72
PF00398262 RrnaAD: Ribosomal RNA adenine dimethylase; InterPr 97.7
PRK04148134 hypothetical protein; Provisional 97.65
PF01739196 CheR: CheR methyltransferase, SAM binding domain; 97.65
KOG0822649 consensus Protein kinase inhibitor [Cell cycle con 97.52
PF01269229 Fibrillarin: Fibrillarin; InterPro: IPR000692 Fibr 97.51
PF02005 377 TRM: N2,N2-dimethylguanosine tRNA methyltransferas 97.46
KOG3178342 consensus Hydroxyindole-O-methyltransferase and re 97.46
PF04816205 DUF633: Family of unknown function (DUF633) ; Inte 97.42
KOG2730263 consensus Methylase [General function prediction o 97.41
COG0116381 Predicted N6-adenine-specific DNA methylase [DNA r 97.38
PF08123205 DOT1: Histone methylation protein DOT1 ; InterPro: 97.35
TIGR03439319 methyl_EasF probable methyltransferase domain, Eas 97.29
COG1867 380 TRM1 N2,N2-dimethylguanosine tRNA methyltransferas 97.29
TIGR00006305 S-adenosyl-methyltransferase MraW. Genetics paper 97.28
PF05148219 Methyltransf_8: Hypothetical methyltransferase; In 97.28
PRK10611287 chemotaxis methyltransferase CheR; Provisional 97.24
PF04989206 CmcI: Cephalosporin hydroxylase; InterPro: IPR0070 97.17
KOG4589232 consensus Cell division protein FtsJ [Cell cycle c 97.14
PRK11760357 putative 23S rRNA C2498 ribose 2'-O-ribose methylt 97.05
COG0500257 SmtA SAM-dependent methyltransferases [Secondary m 97.04
PF09243274 Rsm22: Mitochondrial small ribosomal subunit Rsm22 97.04
TIGR01444143 fkbM_fam methyltransferase, FkbM family. Members o 97.03
COG2384226 Predicted SAM-dependent methyltransferase [General 97.01
PF07942270 N2227: N2227-like protein; InterPro: IPR012901 Thi 96.98
COG1352268 CheR Methylase of chemotaxis methyl-accepting prot 96.97
PF05971299 Methyltransf_10: Protein of unknown function (DUF8 96.9
KOG3115249 consensus Methyltransferase-like protein [General 96.87
PF03141 506 Methyltransf_29: Putative S-adenosyl-L-methionine- 96.83
PF01795310 Methyltransf_5: MraW methylase family; InterPro: I 96.77
KOG1562337 consensus Spermidine synthase [Amino acid transpor 96.75
PF07091251 FmrO: Ribosomal RNA methyltransferase (FmrO); PDB: 96.69
KOG2187534 consensus tRNA uracil-5-methyltransferase and rela 96.59
KOG3045325 consensus Predicted RNA methylase involved in rRNA 96.58
PF06962140 rRNA_methylase: Putative rRNA methylase; InterPro: 96.56
COG0275314 Predicted S-adenosylmethionine-dependent methyltra 96.54
PRK11524284 putative methyltransferase; Provisional 96.46
COG1889231 NOP1 Fibrillarin-like rRNA methylase [Translation, 96.44
KOG1122460 consensus tRNA and rRNA cytosine-C5-methylase (nuc 96.37
PF04445234 SAM_MT: Putative SAM-dependent methyltransferase; 96.35
PF04672267 Methyltransf_19: S-adenosyl methyltransferase; Int 96.35
COG3897218 Predicted methyltransferase [General function pred 96.26
COG1063350 Tdh Threonine dehydrogenase and related Zn-depende 96.19
KOG1099294 consensus SAM-dependent methyltransferase/cell div 96.19
KOG3201201 consensus Uncharacterized conserved protein [Funct 96.05
COG1568354 Predicted methyltransferases [General function pre 96.02
KOG1253 525 consensus tRNA methyltransferase [Translation, rib 95.96
PRK13699227 putative methylase; Provisional 95.95
PF13679141 Methyltransf_32: Methyltransferase domain 95.94
KOG2198375 consensus tRNA cytosine-5-methylases and related e 95.88
KOG1269364 consensus SAM-dependent methyltransferases [Lipid 95.76
KOG2352 482 consensus Predicted spermine/spermidine synthase [ 95.75
PTZ00357 1072 methyltransferase; Provisional 95.75
COG1189245 Predicted rRNA methylase [Translation, ribosomal s 95.69
KOG3987288 consensus Uncharacterized conserved protein DREV/C 95.61
KOG1596317 consensus Fibrillarin and related nucleolar RNA-bi 95.35
COG1064339 AdhP Zn-dependent alcohol dehydrogenases [General 95.34
KOG4058199 consensus Uncharacterized conserved protein [Funct 95.34
PRK09424 509 pntA NAD(P) transhydrogenase subunit alpha; Provis 95.24
cd08283386 FDH_like_1 Glutathione-dependent formaldehyde dehy 95.14
cd00315275 Cyt_C5_DNA_methylase Cytosine-C5 specific DNA meth 94.88
PF01234256 NNMT_PNMT_TEMT: NNMT/PNMT/TEMT family; InterPro: I 94.88
PRK09880343 L-idonate 5-dehydrogenase; Provisional 94.75
PRK05562223 precorrin-2 dehydrogenase; Provisional 94.71
TIGR00518370 alaDH alanine dehydrogenase. The family of known L 94.63
KOG0024354 consensus Sorbitol dehydrogenase [Secondary metabo 94.61
cd08281371 liver_ADH_like1 Zinc-dependent alcohol dehydrogena 94.51
PF01210157 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate 94.47
COG0286489 HsdM Type I restriction-modification system methyl 94.37
TIGR03451358 mycoS_dep_FDH mycothiol-dependent formaldehyde deh 94.26
PF00107130 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: 94.14
PF11968219 DUF3321: Putative methyltransferase (DUF3321); Int 94.07
COG5459 484 Predicted rRNA methylase [Translation, ribosomal s 94.05
PRK10309347 galactitol-1-phosphate dehydrogenase; Provisional 94.04
PHA01634156 hypothetical protein 94.0
cd05188271 MDR Medium chain reductase/dehydrogenase (MDR)/zin 93.92
PF10354166 DUF2431: Domain of unknown function (DUF2431); Int 93.89
PF14314 675 Methyltrans_Mon: Virus-capping methyltransferase 93.85
PF04378245 RsmJ: Ribosomal RNA small subunit methyltransferas 93.65
cd08293345 PTGR2 Prostaglandin reductase. Prostaglandins and 93.65
PF07279218 DUF1442: Protein of unknown function (DUF1442); In 93.49
KOG1501 636 consensus Arginine N-methyltransferase [General fu 93.36
PF03721185 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen 93.35
COG0604326 Qor NADPH:quinone reductase and related Zn-depende 93.35
KOG0821326 consensus Predicted ribosomal RNA adenine dimethyl 93.32
KOG1331293 consensus Predicted methyltransferase [General fun 93.13
TIGR03366280 HpnZ_proposed putative phosphonate catabolism asso 92.84
COG4121252 Uncharacterized conserved protein [Function unknow 92.62
KOG2671421 consensus Putative RNA methylase [Replication, rec 92.54
cd08239339 THR_DH_like L-threonine dehydrogenase (TDH)-like. 92.52
TIGR00561 511 pntA NAD(P) transhydrogenase, alpha subunit. In so 92.46
cd08254338 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo 92.34
COG0686371 Ald Alanine dehydrogenase [Amino acid transport an 92.27
PF12692160 Methyltransf_17: S-adenosyl-L-methionine methyltra 91.97
PF01555231 N6_N4_Mtase: DNA methylase; InterPro: IPR002941 Th 91.85
PF02254116 TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg 91.77
PLN02353 473 probable UDP-glucose 6-dehydrogenase 91.71
cd05278347 FDH_like Formaldehyde dehydrogenases. Formaldehyde 91.67
PF05711248 TylF: Macrocin-O-methyltransferase (TylF); InterPr 91.53
PLN02740381 Alcohol dehydrogenase-like 91.42
KOG2078495 consensus tRNA modification enzyme [RNA processing 91.4
PRK10637 457 cysG siroheme synthase; Provisional 91.39
PF11599246 AviRa: RRNA methyltransferase AviRa; InterPro: IPR 91.39
PRK11524284 putative methyltransferase; Provisional 91.39
cd08285351 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. 91.38
COG0270328 Dcm Site-specific DNA methylase [DNA replication, 91.14
COG2961279 ComJ Protein involved in catabolism of external DN 91.13
PF06460299 NSP13: Coronavirus NSP13; InterPro: IPR009461 This 91.13
cd05285343 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a 91.13
PF00145 335 DNA_methylase: C-5 cytosine-specific DNA methylase 90.99
cd08238410 sorbose_phosphate_red L-sorbose-1-phosphate reduct 90.9
PLN02827378 Alcohol dehydrogenase-like 90.87
TIGR02825325 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 90.85
PF01262168 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal 90.71
TIGR01470205 cysG_Nterm siroheme synthase, N-terminal domain. T 90.68
cd08230355 glucose_DH Glucose dehydrogenase. Glucose dehydrog 90.66
TIGR03201349 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co 90.57
cd08294329 leukotriene_B4_DH_like 13-PGR is a bifunctional en 90.55
PRK11064 415 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro 90.36
PRK08293287 3-hydroxybutyryl-CoA dehydrogenase; Validated 90.3
PF02737180 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind 90.21
PLN03154348 putative allyl alcohol dehydrogenase; Provisional 90.17
TIGR01202308 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl 90.11
TIGR00497501 hsdM type I restriction system adenine methylase ( 90.04
PRK09260288 3-hydroxybutyryl-CoA dehydrogenase; Validated 89.74
cd08232339 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 89.61
PRK05808282 3-hydroxybutyryl-CoA dehydrogenase; Validated 89.53
TIGR02818368 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr 89.51
PRK07502307 cyclohexadienyl dehydrogenase; Validated 89.39
cd08295338 double_bond_reductase_like Arabidopsis alkenal dou 89.35
cd08300368 alcohol_DH_class_III class III alcohol dehydrogena 89.3
PRK08223287 hypothetical protein; Validated 89.18
cd08278365 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be 89.16
PRK00066315 ldh L-lactate dehydrogenase; Reviewed 88.92
COG4798238 Predicted methyltransferase [General function pred 88.86
cd05279365 Zn_ADH1 Liver alcohol dehydrogenase and related zi 88.79
TIGR00936406 ahcY adenosylhomocysteinase. This enzyme hydrolyze 88.76
PRK05597355 molybdopterin biosynthesis protein MoeB; Validated 88.7
PRK07066321 3-hydroxybutyryl-CoA dehydrogenase; Validated 88.64
PRK07530292 3-hydroxybutyryl-CoA dehydrogenase; Validated 88.62
cd08233351 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog 88.61
COG1179263 Dinucleotide-utilizing enzymes involved in molybdo 88.53
COG1062366 AdhC Zn-dependent alcohol dehydrogenases, class II 88.38
KOG2793248 consensus Putative N2,N2-dimethylguanosine tRNA me 88.33
PF13241103 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_ 88.28
cd08234334 threonine_DH_like L-threonine dehydrogenase. L-thr 88.15
cd08301369 alcohol_DH_plants Plant alcohol dehydrogenase. NAD 88.1
PRK15116268 sulfur acceptor protein CsdL; Provisional 88.04
PRK06130311 3-hydroxybutyryl-CoA dehydrogenase; Validated 87.96
PLN02545295 3-hydroxybutyryl-CoA dehydrogenase 87.95
cd01487174 E1_ThiF_like E1_ThiF_like. Member of superfamily o 87.94
PF02636252 Methyltransf_28: Putative S-adenosyl-L-methionine- 87.78
cd08237341 ribitol-5-phosphate_DH ribitol-5-phosphate dehydro 87.76
COG0569225 TrkA K+ transport systems, NAD-binding component [ 87.57
PF10237162 N6-adenineMlase: Probable N6-adenine methyltransfe 87.52
PRK12475338 thiamine/molybdopterin biosynthesis MoeB-like prot 87.36
cd08277365 liver_alcohol_DH_like Liver alcohol dehydrogenase. 87.26
TIGR02822329 adh_fam_2 zinc-binding alcohol dehydrogenase famil 87.18
PRK13699227 putative methylase; Provisional 87.18
cd01065155 NAD_bind_Shikimate_DH NAD(P) binding domain of Shi 87.06
PRK06035291 3-hydroxyacyl-CoA dehydrogenase; Validated 87.05
cd05290307 LDH_3 A subgroup of L-lactate dehydrogenases. L-la 87.02
PRK07819286 3-hydroxybutyryl-CoA dehydrogenase; Validated 87.02
cd00755231 YgdL_like Family of activating enzymes (E1) of ubi 86.94
TIGR02356202 adenyl_thiF thiazole biosynthesis adenylyltransfer 86.92
PF01408120 GFO_IDH_MocA: Oxidoreductase family, NAD-binding R 86.84
PRK08268 507 3-hydroxy-acyl-CoA dehydrogenase; Validated 86.67
KOG1227351 consensus Putative methyltransferase [General func 86.66
PRK08644212 thiamine biosynthesis protein ThiF; Provisional 86.35
cd00401413 AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado 86.31
PRK08328231 hypothetical protein; Provisional 86.25
COG0677 436 WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenas 85.9
cd08236343 sugar_DH NAD(P)-dependent sugar dehydrogenases. Th 85.78
PRK03562621 glutathione-regulated potassium-efflux system prot 85.78
PTZ00117319 malate dehydrogenase; Provisional 85.76
COG0287279 TyrA Prephenate dehydrogenase [Amino acid transpor 85.73
cd01492197 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit 85.48
PF03269177 DUF268: Caenorhabditis protein of unknown function 85.47
PRK05476425 S-adenosyl-L-homocysteine hydrolase; Provisional 85.29
PRK06719157 precorrin-2 dehydrogenase; Validated 85.13
PF03141506 Methyltransf_29: Putative S-adenosyl-L-methionine- 85.06
KOG2798369 consensus Putative trehalase [Carbohydrate transpo 84.9
PRK09496453 trkA potassium transporter peripheral membrane com 84.88
PF01488135 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; 84.81
cd05291306 HicDH_like L-2-hydroxyisocapronate dehydrogenases 84.73
cd05288329 PGDH Prostaglandin dehydrogenases. Prostaglandins 84.71
PF11899380 DUF3419: Protein of unknown function (DUF3419); In 84.42
PRK07688339 thiamine/molybdopterin biosynthesis ThiF/MoeB-like 84.35
cd05292308 LDH_2 A subgroup of L-lactate dehydrogenases. L-la 84.24
PRK10458 467 DNA cytosine methylase; Provisional 84.04
cd05298 437 GH4_GlvA_pagL_like Glycoside Hydrolases Family 4; 84.04
cd05281341 TDH Threonine dehydrogenase. L-threonine dehydroge 84.02
PRK08618325 ornithine cyclodeaminase; Validated 83.98
PRK10669558 putative cation:proton antiport protein; Provision 83.91
cd08286345 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik 83.9
PRK03659601 glutathione-regulated potassium-efflux system prot 83.78
TIGR00675 315 dcm DNA-methyltransferase (dcm). All proteins in t 83.74
cd08261337 Zn_ADH7 Alcohol dehydrogenases of the MDR family. 83.34
cd08255277 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_ 83.28
COG1565370 Uncharacterized conserved protein [Function unknow 83.08
PRK06141314 ornithine cyclodeaminase; Validated 82.87
KOG1098 780 consensus Putative SAM-dependent rRNA methyltransf 82.86
PLN02819 1042 lysine-ketoglutarate reductase/saccharopine dehydr 82.73
COG0541 451 Ffh Signal recognition particle GTPase [Intracellu 82.7
PTZ00082321 L-lactate dehydrogenase; Provisional 82.59
TIGR02279 503 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase Pa 82.04
PRK06223307 malate dehydrogenase; Reviewed 82.02
COG1648210 CysG Siroheme synthase (precorrin-2 oxidase/ferroc 82.0
PF06859110 Bin3: Bicoid-interacting protein 3 (Bin3); InterPr 81.69
cd00757228 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 81.66
cd01491286 Ube1_repeat1 Ubiquitin activating enzyme (E1), rep 81.58
TIGR00692340 tdh L-threonine 3-dehydrogenase. E. coli His-90 mo 81.57
TIGR02819393 fdhA_non_GSH formaldehyde dehydrogenase, glutathio 81.41
PF02719293 Polysacc_synt_2: Polysaccharide biosynthesis prote 81.39
COG1748 389 LYS9 Saccharopine dehydrogenase and related protei 81.33
PRK08306296 dipicolinate synthase subunit A; Reviewed 81.17
PRK05396341 tdh L-threonine 3-dehydrogenase; Validated 81.13
PRK06949258 short chain dehydrogenase; Provisional 80.95
PF00072112 Response_reg: Response regulator receiver domain; 80.94
cd08243320 quinone_oxidoreductase_like_1 Quinone oxidoreducta 80.87
PRK09422338 ethanol-active dehydrogenase/acetaldehyde-active r 80.63
PRK07340304 ornithine cyclodeaminase; Validated 80.53
TIGR01627225 A_thal_3515 uncharacterized plant-specific domain 80.46
PRK06124256 gluconate 5-dehydrogenase; Provisional 80.41
PRK08762376 molybdopterin biosynthesis protein MoeB; Validated 80.21
cd01483143 E1_enzyme_family Superfamily of activating enzymes 80.15
PRK15057 388 UDP-glucose 6-dehydrogenase; Provisional 80.08
COG4017254 Uncharacterized protein conserved in archaea [Func 80.08
>PLN02366 spermidine synthase Back     alignment and domain information 
Probab=100.00  E-value=8.6e-63  Score=475.23  Aligned_cols=304  Identities=77%  Similarity=1.349  Sum_probs=271.6

Q ss_pred             cCccccccccccccccceeccccCCCccccccccCCCCCcccceeeeeeeEEEeeeCCCceEEEEEecCceeEEEEcCeE
Q 017607           39 SAPELDAKCHSTVVSGWFSESQSTSDKTGKTMYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIV  118 (369)
Q Consensus        39 ~~~~~~~~~~~~~~~~w~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~s~~q~I~v~~~~~~G~~l~lDg~~  118 (369)
                      ..|++...++..+++.||+|.              .+.+++.+++++++++|++.+|+||+|.|+++..+|++|+|||.+
T Consensus         2 ~~~~~~~~~~~~~~~~w~~e~--------------~~~~~~~~~~~~v~~~l~~~~s~yQ~i~v~~~~~~g~~L~lDg~~   67 (308)
T PLN02366          2 AAPESEAKCHSTVIPGWFSEI--------------SPMWPGEAHSLKVEKVLFQGKSDFQDVLVFESATYGKVLVLDGVI   67 (308)
T ss_pred             CCCCCCccccchhhhceEeec--------------ccCCCCceEEEEEeeEEEeccCCCeeEEEEEcCCCceEEEECCEe
Confidence            467888899999999999997              445688999999999999999999999999999999999999999


Q ss_pred             eecccchhHHHHHHHhccccCCCCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCE
Q 017607          119 QLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRV  198 (369)
Q Consensus       119 q~~~~de~~Y~e~l~~~~l~~~~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv  198 (369)
                      |++++|++.|||||+|+|++.|++|++||+||||+|++++++++++++.+|++||||++|++.||++|+..+.+++++|+
T Consensus        68 q~~~~de~~Y~e~l~h~~l~~~~~pkrVLiIGgG~G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv  147 (308)
T PLN02366         68 QLTERDECAYQEMITHLPLCSIPNPKKVLVVGGGDGGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRV  147 (308)
T ss_pred             eecCccHHHHHHHHHHHHHhhCCCCCeEEEEcCCccHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCce
Confidence            99999999999999999999999999999999999999999999988899999999999999999999877656789999


Q ss_pred             EEEEcchHHHHhhCCCCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecccccchhhhHHHHHHHHHHHHC
Q 017607          199 RLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETF  278 (369)
Q Consensus       199 ~v~~~Da~~~l~~~~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~i~~~l~~~F  278 (369)
                      +++++|+++++++.++++||+||+|+++|.+++..|++.+||+.++++|+|||++++|++++|...+.++.+.++++++|
T Consensus       148 ~vi~~Da~~~l~~~~~~~yDvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q~~s~~~~~~~~~~i~~tl~~~F  227 (308)
T PLN02366        148 NLHIGDGVEFLKNAPEGTYDAIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQAESMWLHMDLIEDLIAICRETF  227 (308)
T ss_pred             EEEEChHHHHHhhccCCCCCEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEECcCCcccchHHHHHHHHHHHHHC
Confidence            99999999999865456899999999999999889999999999999999999999999999999999999999999999


Q ss_pred             CCCeeEEEEEEeeccCCcEEEEEeecCCCCCCCCCCCCchhhhcccccCCCCCeeeCHHHHHHHhcCCHHHHHHhhcc
Q 017607          279 KGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFLKREVSVL  356 (369)
Q Consensus       279 ~~~v~~~~~~vP~~p~g~w~f~~ask~~~~~~~~~p~~~~~~~~~~~~~~~~~~yy~~~~h~a~f~lP~~~~~~l~~~  356 (369)
                      +.++.++++.||+||+|.|||++||++.+..++.+|.+....++.......+|||||+++|+++|+||+|+++.|...
T Consensus       228 ~~~v~~~~~~vPsy~~g~w~f~~as~~~~~~~~~~~~~~~~~~~~~~~~~~~l~yy~~~~h~~~f~lp~~~~~~l~~~  305 (308)
T PLN02366        228 KGSVNYAWTTVPTYPSGVIGFVLCSKEGPAVDFKHPVNPIDKLEGAGKAKRPLKFYNSEVHRAAFCLPSFAKRELESL  305 (308)
T ss_pred             CCceeEEEecCCCcCCCceEEEEEECCCccccccccccccchhhhhhcccCCCeEECHHHHHHHhcChHHHHHHHHhc
Confidence            558899999999999999999999997444444555443322110001124689999999999999999999999865

>KOG1562 consensus Spermidine synthase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK00536 speE spermidine synthase; Provisional Back     alignment and domain information
>PRK00811 spermidine synthase; Provisional Back     alignment and domain information
>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism] Back     alignment and domain information
>PLN02823 spermine synthase Back     alignment and domain information
>TIGR00417 speE spermidine synthase Back     alignment and domain information
>PF01564 Spermine_synth: Spermine/spermidine synthase; InterPro: IPR001045 Synonym(s): Spermidine aminopropyltransferase A group of polyamine biosynthetic enzymes involved in the fifth (last) step in the biosynthesis of spermidine from arginine and methionine which includes; spermidine synthase (2 Back     alignment and domain information
>PRK03612 spermidine synthase; Provisional Back     alignment and domain information
>PRK01581 speE spermidine synthase; Validated Back     alignment and domain information
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only] Back     alignment and domain information
>PRK04457 spermidine synthase; Provisional Back     alignment and domain information
>COG2521 Predicted archaeal methyltransferase [General function prediction only] Back     alignment and domain information
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A Back     alignment and domain information
>TIGR03533 L3_gln_methyl protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific Back     alignment and domain information
>PRK14966 unknown domain/N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase fusion protein; Provisional Back     alignment and domain information
>PRK11805 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional Back     alignment and domain information
>PRK01544 bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase; Reviewed Back     alignment and domain information
>PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A Back     alignment and domain information
>TIGR00536 hemK_fam HemK family putative methylases Back     alignment and domain information
>TIGR00091 tRNA (guanine-N(7)-)-methyltransferase Back     alignment and domain information
>PF05175 MTS: Methyltransferase small domain; InterPro: IPR007848 This domain is found in ribosomal RNA small subunit methyltransferase C and in other methyltransferases Back     alignment and domain information
>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed Back     alignment and domain information
>COG4123 Predicted O-methyltransferase [General function prediction only] Back     alignment and domain information
>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase Back     alignment and domain information
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism] Back     alignment and domain information
>COG4122 Predicted O-methyltransferase [General function prediction only] Back     alignment and domain information
>PLN02476 O-methyltransferase Back     alignment and domain information
>TIGR03704 PrmC_rel_meth putative protein-(glutamine-N5) methyltransferase, unknown substrate-specific Back     alignment and domain information
>PF13847 Methyltransf_31: Methyltransferase domain; PDB: 3T0I_B 3SVZ_B 3SXJ_A 3F4K_A 3GU3_B 2GH1_A 1R8Y_E 1R8X_B 2B3T_A 1T43_A Back     alignment and domain information
>TIGR00138 gidB 16S rRNA methyltransferase GidB Back     alignment and domain information
>COG2890 HemK Methylase of polypeptide chain release factors [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK14121 tRNA (guanine-N(7)-)-methyltransferase; Provisional Back     alignment and domain information
>COG4106 Tam Trans-aconitate methyltransferase [General function prediction only] Back     alignment and domain information
>PLN02781 Probable caffeoyl-CoA O-methyltransferase Back     alignment and domain information
>PRK15451 tRNA cmo(5)U34 methyltransferase; Provisional Back     alignment and domain information
>PRK09328 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional Back     alignment and domain information
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases Back     alignment and domain information
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed Back     alignment and domain information
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit Back     alignment and domain information
>PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals Back     alignment and domain information
>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities [] Back     alignment and domain information
>PRK15001 SAM-dependent 23S ribosomal RNA mG1835 methyltransferase; Provisional Back     alignment and domain information
>TIGR03534 RF_mod_PrmC protein-(glutamine-N5) methyltransferase, release factor-specific Back     alignment and domain information
>PRK15128 23S rRNA m(5)C1962 methyltransferase; Provisional Back     alignment and domain information
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated Back     alignment and domain information
>PRK01683 trans-aconitate 2-methyltransferase; Provisional Back     alignment and domain information
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional Back     alignment and domain information
>PRK09489 rsmC 16S ribosomal RNA m2G1207 methyltransferase; Provisional Back     alignment and domain information
>PLN02233 ubiquinone biosynthesis methyltransferase Back     alignment and domain information
>PLN02244 tocopherol O-methyltransferase Back     alignment and domain information
>PRK14103 trans-aconitate 2-methyltransferase; Provisional Back     alignment and domain information
>TIGR00740 methyltransferase, putative Back     alignment and domain information
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PF13649 Methyltransf_25: Methyltransferase domain; PDB: 3BXO_B 3GGD_A 3PX2_A 3PX3_A 3PFH_D 3PFG_A 1Y8C_A Back     alignment and domain information
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional Back     alignment and domain information
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism] Back     alignment and domain information
>PF02390 Methyltransf_4: Putative methyltransferase ; InterPro: IPR003358 This entry represents tRNA (guanine-N-7) methyltransferase (2 Back     alignment and domain information
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4) Back     alignment and domain information
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed Back     alignment and domain information
>PRK07402 precorrin-6B methylase; Provisional Back     alignment and domain information
>PRK14967 putative methyltransferase; Provisional Back     alignment and domain information
>COG2813 RsmC 16S RNA G1207 methylase RsmC [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR00537 hemK_rel_arch HemK-related putative methylase Back     alignment and domain information
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional Back     alignment and domain information
>PRK04266 fibrillarin; Provisional Back     alignment and domain information
>PRK11207 tellurite resistance protein TehB; Provisional Back     alignment and domain information
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase Back     alignment and domain information
>TIGR02072 BioC biotin biosynthesis protein BioC Back     alignment and domain information
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional Back     alignment and domain information
>COG1092 Predicted SAM-dependent methyltransferases [General function prediction only] Back     alignment and domain information
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional Back     alignment and domain information
>PLN02589 caffeoyl-CoA O-methyltransferase Back     alignment and domain information
>COG0220 Predicted S-adenosylmethionine-dependent methyltransferase [General function prediction only] Back     alignment and domain information
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF08242 Methyltransf_12: Methyltransferase domain; InterPro: IPR013217 Methyl transfer from the ubiquitous donor S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals Back     alignment and domain information
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PLN03075 nicotianamine synthase; Provisional Back     alignment and domain information
>smart00828 PKS_MT Methyltransferase in polyketide synthase (PKS) enzymes Back     alignment and domain information
>TIGR00406 prmA ribosomal protein L11 methyltransferase Back     alignment and domain information
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism] Back     alignment and domain information
>PLN02396 hexaprenyldihydroxybenzoate methyltransferase Back     alignment and domain information
>PRK10909 rsmD 16S rRNA m(2)G966-methyltransferase; Provisional Back     alignment and domain information
>PF05401 NodS: Nodulation protein S (NodS); InterPro: IPR008715 This entry consists of nodulation S (NodS) proteins Back     alignment and domain information
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences Back     alignment and domain information
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed Back     alignment and domain information
>TIGR00477 tehB tellurite resistance protein TehB Back     alignment and domain information
>PRK10258 biotin biosynthesis protein BioC; Provisional Back     alignment and domain information
>PRK11783 rlmL 23S rRNA m(2)G2445 methyltransferase; Provisional Back     alignment and domain information
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2 Back     alignment and domain information
>PRK11188 rrmJ 23S rRNA methyltransferase J; Provisional Back     alignment and domain information
>PLN02490 MPBQ/MSBQ methyltransferase Back     alignment and domain information
>PLN02336 phosphoethanolamine N-methyltransferase Back     alignment and domain information
>PLN02672 methionine S-methyltransferase Back     alignment and domain information
>PRK06922 hypothetical protein; Provisional Back     alignment and domain information
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK14968 putative methyltransferase; Provisional Back     alignment and domain information
>PRK08317 hypothetical protein; Provisional Back     alignment and domain information
>PRK12335 tellurite resistance protein TehB; Provisional Back     alignment and domain information
>PRK11088 rrmA 23S rRNA methyltransferase A; Provisional Back     alignment and domain information
>KOG1271 consensus Methyltransferases [General function prediction only] Back     alignment and domain information
>TIGR01177 conserved hypothetical protein TIGR01177 Back     alignment and domain information
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA [] Back     alignment and domain information
>PHA03411 putative methyltransferase; Provisional Back     alignment and domain information
>PRK10901 16S rRNA methyltransferase B; Provisional Back     alignment and domain information
>PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed Back     alignment and domain information
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional Back     alignment and domain information
>TIGR03587 Pse_Me-ase pseudaminic acid biosynthesis-associated methylase Back     alignment and domain information
>KOG1540 consensus Ubiquinone biosynthesis methyltransferase COQ5 [Coenzyme transport and metabolism] Back     alignment and domain information
>TIGR00438 rrmJ cell division protein FtsJ Back     alignment and domain information
>TIGR01934 MenG_MenH_UbiE ubiquinone/menaquinone biosynthesis methyltransferases Back     alignment and domain information
>PRK14902 16S rRNA methyltransferase B; Provisional Back     alignment and domain information
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed Back     alignment and domain information
>PF10672 Methyltrans_SAM: S-adenosylmethionine-dependent methyltransferase; InterPro: IPR019614 Members of this entry are S-adenosylmethionine-dependent methyltransferases from gamma-proteobacterial species Back     alignment and domain information
>TIGR02716 C20_methyl_CrtF C-20 methyltransferase BchU Back     alignment and domain information
>PRK14904 16S rRNA methyltransferase B; Provisional Back     alignment and domain information
>KOG1270 consensus Methyltransferases [Coenzyme transport and metabolism] Back     alignment and domain information
>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase Back     alignment and domain information
>TIGR00095 RNA methyltransferase, RsmD family Back     alignment and domain information
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional Back     alignment and domain information
>cd02440 AdoMet_MTases S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy) Back     alignment and domain information
>smart00650 rADc Ribosomal RNA adenine dimethylases Back     alignment and domain information
>PRK15068 tRNA mo(5)U34 methyltransferase; Provisional Back     alignment and domain information
>PHA03412 putative methyltransferase; Provisional Back     alignment and domain information
>PTZ00146 fibrillarin; Provisional Back     alignment and domain information
>TIGR02021 BchM-ChlM magnesium protoporphyrin O-methyltransferase Back     alignment and domain information
>PRK14903 16S rRNA methyltransferase B; Provisional Back     alignment and domain information
>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB Back     alignment and domain information
>PLN02336 phosphoethanolamine N-methyltransferase Back     alignment and domain information
>TIGR03438 probable methyltransferase Back     alignment and domain information
>KOG2904 consensus Predicted methyltransferase [General function prediction only] Back     alignment and domain information
>PRK14901 16S rRNA methyltransferase B; Provisional Back     alignment and domain information
>PF03848 TehB: Tellurite resistance protein TehB; InterPro: IPR015985 Tellurite resistance protein TehB is part of a tellurite-reducing operon tehA and tehB Back     alignment and domain information
>KOG2899 consensus Predicted methyltransferase [General function prediction only] Back     alignment and domain information
>TIGR00452 methyltransferase, putative Back     alignment and domain information
>PF03602 Cons_hypoth95: Conserved hypothetical protein 95; InterPro: IPR004398 This entry contains Ribosomal RNA small subunit methyltransferase D as well as the putative rRNA methyltransferase YlbH Back     alignment and domain information
>PRK05785 hypothetical protein; Provisional Back     alignment and domain information
>KOG2352 consensus Predicted spermine/spermidine synthase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK01544 bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase; Reviewed Back     alignment and domain information
>KOG3010 consensus Methyltransferase [General function prediction only] Back     alignment and domain information
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family Back     alignment and domain information
>PRK05134 bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase; Provisional Back     alignment and domain information
>PF13489 Methyltransf_23: Methyltransferase domain; PDB: 3JWJ_A 3JWH_B 2AOV_B 2AOT_A 1JQD_B 2AOX_A 1JQE_A 2AOU_B 2AOW_A 3DLI_C Back     alignment and domain information
>PRK13168 rumA 23S rRNA m(5)U1939 methyltransferase; Reviewed Back     alignment and domain information
>COG2263 Predicted RNA methylase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR01983 UbiG ubiquinone biosynthesis O-methyltransferase Back     alignment and domain information
>PRK06202 hypothetical protein; Provisional Back     alignment and domain information
>TIGR00479 rumA 23S rRNA (uracil-5-)-methyltransferase RumA Back     alignment and domain information
>smart00138 MeTrc Methyltransferase, chemotaxis proteins Back     alignment and domain information
>KOG4300 consensus Predicted methyltransferase [General function prediction only] Back     alignment and domain information
>PRK07580 Mg-protoporphyrin IX methyl transferase; Validated Back     alignment and domain information
>PRK03522 rumB 23S rRNA methyluridine methyltransferase; Reviewed Back     alignment and domain information
>PRK04338 N(2),N(2)-dimethylguanosine tRNA methyltransferase; Provisional Back     alignment and domain information
>TIGR02085 meth_trns_rumB 23S rRNA (uracil-5-)-methyltransferase RumB Back     alignment and domain information
>PRK13255 thiopurine S-methyltransferase; Reviewed Back     alignment and domain information
>PLN02585 magnesium protoporphyrin IX methyltransferase Back     alignment and domain information
>PF07021 MetW: Methionine biosynthesis protein MetW; InterPro: IPR010743 This family consists of several bacterial and one archaeal methionine biosynthesis MetW proteins Back     alignment and domain information
>PF02475 Met_10: Met-10+ like-protein; InterPro: IPR003402 This entry represents the Trm5 family Back     alignment and domain information
>KOG1663 consensus O-methyltransferase [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PRK05031 tRNA (uracil-5-)-methyltransferase; Validated Back     alignment and domain information
>TIGR02143 trmA_only tRNA (uracil-5-)-methyltransferase Back     alignment and domain information
>COG0742 N6-adenine-specific methylase [DNA replication, recombination, and repair] Back     alignment and domain information
>PF05891 Methyltransf_PK: AdoMet dependent proline di-methyltransferase; InterPro: IPR008576 This family consists of several eukaryotic proteins of unknown function that are S-adenosyl-L-methionine-dependent methyltransferase-like Back     alignment and domain information
>PF00891 Methyltransf_2: O-methyltransferase; InterPro: IPR001077 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (AdoMet) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals Back     alignment and domain information
>COG3963 Phospholipid N-methyltransferase [Lipid metabolism] Back     alignment and domain information
>COG4976 Predicted methyltransferase (contains TPR repeat) [General function prediction only] Back     alignment and domain information
>TIGR00308 TRM1 tRNA(guanine-26,N2-N2) methyltransferase Back     alignment and domain information
>PRK11727 23S rRNA mA1618 methyltransferase; Provisional Back     alignment and domain information
>TIGR02081 metW methionine biosynthesis protein MetW Back     alignment and domain information
>PTZ00338 dimethyladenosine transferase-like protein; Provisional Back     alignment and domain information
>PRK11933 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF; Reviewed Back     alignment and domain information
>COG2520 Predicted methyltransferase [General function prediction only] Back     alignment and domain information
>PRK13256 thiopurine S-methyltransferase; Reviewed Back     alignment and domain information
>KOG1541 consensus Predicted protein carboxyl methylase [General function prediction only] Back     alignment and domain information
>PF05185 PRMT5: PRMT5 arginine-N-methyltransferase; InterPro: IPR007857 The human homologue of Saccharomyces cerevisiae Skb1 (Shk1 kinase-binding protein 1) is a protein methyltransferase [] Back     alignment and domain information
>PF09445 Methyltransf_15: RNA cap guanine-N2 methyltransferase; InterPro: IPR019012 RNA cap guanine-N2 methyltransferases such as Schizosaccharomyces pombe (Fission yeast) trimethylguanosine synthase (Tgs1) and Giardia lamblia (Giardia intestinalis) Tgs2, catalyse the methylation step(s) for the conversion of the 7-monomethylguanosine (m(7)G) caps of snRNAs and snoRNAs to a 2,2,7-trimethylguanosine (m(2,2,7)G) cap structure [, , ] Back     alignment and domain information
>PRK14896 ksgA 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein; Provisional Back     alignment and domain information
>PF10294 Methyltransf_16: Putative methyltransferase; InterPro: IPR019410 There are a number of unidentified genes that have a high probability of coding for methyltransferases Back     alignment and domain information
>KOG1661 consensus Protein-L-isoaspartate(D-aspartate) O-methyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG1709 consensus Guanidinoacetate methyltransferase and related proteins [Amino acid transport and metabolism] Back     alignment and domain information
>PF01170 UPF0020: Putative RNA methylase family UPF0020; InterPro: IPR000241 This domain is probably a methylase Back     alignment and domain information
>PRK00274 ksgA 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein; Reviewed Back     alignment and domain information
>KOG3191 consensus Predicted N6-DNA-methyltransferase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>COG1041 Predicted DNA modification methylase [DNA replication, recombination, and repair] Back     alignment and domain information
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes Back     alignment and domain information
>PF03291 Pox_MCEL: mRNA capping enzyme; InterPro: IPR004971 This is a family of viral mRNA capping enzymes Back     alignment and domain information
>TIGR00755 ksgA dimethyladenosine transferase Back     alignment and domain information
>PF08003 Methyltransf_9: Protein of unknown function (DUF1698); InterPro: IPR010017 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (AdoMet) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals Back     alignment and domain information
>COG0030 KsgA Dimethyladenosine transferase (rRNA methylation) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF02527 GidB: rRNA small subunit methyltransferase G; InterPro: IPR003682 This entry represents a rRNA small subunit methyltransferase G Back     alignment and domain information
>PF05219 DREV: DREV methyltransferase; InterPro: IPR007884 This family contains DREV protein homologues from several eukaryotes Back     alignment and domain information
>PRK00050 16S rRNA m(4)C1402 methyltranserfase; Provisional Back     alignment and domain information
>TIGR02987 met_A_Alw26 type II restriction m6 adenine DNA methyltransferase, Alw26I/Eco31I/Esp3I family Back     alignment and domain information
>PF13578 Methyltransf_24: Methyltransferase domain; PDB: 3SSO_A 3SSN_C 3SSM_D Back     alignment and domain information
>KOG1975 consensus mRNA cap methyltransferase [RNA processing and modification] Back     alignment and domain information
>PLN02232 ubiquinone biosynthesis methyltransferase Back     alignment and domain information
>PF01728 FtsJ: FtsJ-like methyltransferase; InterPro: IPR002877 RrmJ (FtsJ) is a well conserved heat shock protein present in prokaryotes, archaea, and eukaryotes Back     alignment and domain information
>COG2265 TrmA SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF02384 N6_Mtase: N-6 DNA Methylase; InterPro: IPR003356 This domain is fpound in N-6 adenine-specific DNA methylase (2 Back     alignment and domain information
>PF05430 Methyltransf_30: S-adenosyl-L-methionine-dependent methyltransferase; InterPro: IPR008471 This entry contains several uncharacterised bacterial proteins with no known function Back     alignment and domain information
>KOG2361 consensus Predicted methyltransferase [General function prediction only] Back     alignment and domain information
>PRK11783 rlmL 23S rRNA m(2)G2445 methyltransferase; Provisional Back     alignment and domain information
>TIGR00478 tly hemolysin TlyA family protein Back     alignment and domain information
>COG0144 Sun tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG2940 consensus Predicted methyltransferase [General function prediction only] Back     alignment and domain information
>COG4076 Predicted RNA methylase [General function prediction only] Back     alignment and domain information
>PF05958 tRNA_U5-meth_tr: tRNA (Uracil-5-)-methyltransferase; InterPro: IPR010280 This family consists of (uracil-5-)-methyltransferases 2 Back     alignment and domain information
>KOG3420 consensus Predicted RNA methylase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG1499 consensus Protein arginine N-methyltransferase PRMT1 and related enzymes [Posttranslational modification, protein turnover, chaperones; Transcription; Signal transduction mechanisms] Back     alignment and domain information
>PRK01747 mnmC bifunctional tRNA (mnm(5)s(2)U34)-methyltransferase/FAD-dependent cmnm(5)s(2)U34 oxidoreductase; Reviewed Back     alignment and domain information
>KOG0820 consensus Ribosomal RNA adenine dimethylase [RNA processing and modification] Back     alignment and domain information
>COG0293 FtsJ 23S rRNA methylase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF03059 NAS: Nicotianamine synthase protein; InterPro: IPR004298 Nicotianamine synthase 2 Back     alignment and domain information
>PF12147 Methyltransf_20: Putative methyltransferase; InterPro: IPR022744 This C-terminal region is found in bacteria and eukaryotes and is approximately 110 amino acids in length Back     alignment and domain information
>COG0357 GidB Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PF06080 DUF938: Protein of unknown function (DUF938); InterPro: IPR010342 This family consists of several hypothetical proteins from both prokaryotes and eukaryotes Back     alignment and domain information
>KOG2915 consensus tRNA(1-methyladenosine) methyltransferase, subunit GCD14 [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF01861 DUF43: Protein of unknown function DUF43; InterPro: IPR002723 This family of prokaryotic proteins have not been characterised Back     alignment and domain information
>PF01189 Nol1_Nop2_Fmu: NOL1/NOP2/sun family; InterPro: IPR001678 This domain is found in archaeal, bacterial and eukaryotic proteins Back     alignment and domain information
>PRK10742 putative methyltransferase; Provisional Back     alignment and domain information
>KOG1500 consensus Protein arginine N-methyltransferase CARM1 [Posttranslational modification, protein turnover, chaperones; Transcription] Back     alignment and domain information
>PF00398 RrnaAD: Ribosomal RNA adenine dimethylase; InterPro: IPR001737 This family of proteins include rRNA adenine dimethylases (e Back     alignment and domain information
>PRK04148 hypothetical protein; Provisional Back     alignment and domain information
>PF01739 CheR: CheR methyltransferase, SAM binding domain; InterPro: IPR022642 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (AdoMet) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals Back     alignment and domain information
>KOG0822 consensus Protein kinase inhibitor [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>PF01269 Fibrillarin: Fibrillarin; InterPro: IPR000692 Fibrillarin is a component of a nucleolar small nuclear ribonucleoprotein (SnRNP), functioning in vivo in ribosomal RNA processing [, ] Back     alignment and domain information
>PF02005 TRM: N2,N2-dimethylguanosine tRNA methyltransferase; InterPro: IPR002905 This enzyme 2 Back     alignment and domain information
>KOG3178 consensus Hydroxyindole-O-methyltransferase and related SAM-dependent methyltransferases [General function prediction only] Back     alignment and domain information
>PF04816 DUF633: Family of unknown function (DUF633) ; InterPro: IPR006901 This is a family of uncharacterised bacterial proteins Back     alignment and domain information
>KOG2730 consensus Methylase [General function prediction only] Back     alignment and domain information
>COG0116 Predicted N6-adenine-specific DNA methylase [DNA replication, recombination, and repair] Back     alignment and domain information
>PF08123 DOT1: Histone methylation protein DOT1 ; InterPro: IPR013110 The DOT1 domain regulates gene expression by methylating histone H3 [] Back     alignment and domain information
>TIGR03439 methyl_EasF probable methyltransferase domain, EasF family Back     alignment and domain information
>COG1867 TRM1 N2,N2-dimethylguanosine tRNA methyltransferase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR00006 S-adenosyl-methyltransferase MraW Back     alignment and domain information
>PF05148 Methyltransf_8: Hypothetical methyltransferase; InterPro: IPR007823 This family consists of uncharacterised eukaryotic proteins which are related to S-adenosyl-L-methionine-dependent methyltransferases Back     alignment and domain information
>PRK10611 chemotaxis methyltransferase CheR; Provisional Back     alignment and domain information
>PF04989 CmcI: Cephalosporin hydroxylase; InterPro: IPR007072 This entry contains Rhamnosyl O-methyltransferase which catalyses the O-methylation of the hydroxyl group located on C-2 of the first rhamnosyl residue linked to the phenolic group of glycosylated phenolphthiocerol dimycocerosates (PGL) and p-hydroxybenzoic acid derivatives (p-HBAD) [] Back     alignment and domain information
>KOG4589 consensus Cell division protein FtsJ [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>PRK11760 putative 23S rRNA C2498 ribose 2'-O-ribose methyltransferase; Provisional Back     alignment and domain information
>COG0500 SmtA SAM-dependent methyltransferases [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] Back     alignment and domain information
>PF09243 Rsm22: Mitochondrial small ribosomal subunit Rsm22; InterPro: IPR015324 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms Back     alignment and domain information
>TIGR01444 fkbM_fam methyltransferase, FkbM family Back     alignment and domain information
>COG2384 Predicted SAM-dependent methyltransferase [General function prediction only] Back     alignment and domain information
>PF07942 N2227: N2227-like protein; InterPro: IPR012901 This family features sequences that are similar to a region of hypothetical yeast gene product N2227 (P53934 from SWISSPROT) Back     alignment and domain information
>COG1352 CheR Methylase of chemotaxis methyl-accepting proteins [Cell motility and secretion / Signal transduction mechanisms] Back     alignment and domain information
>PF05971 Methyltransf_10: Protein of unknown function (DUF890); InterPro: IPR010286 This family consists of several conserved hypothetical proteins from both eukaryotes and prokaryotes Back     alignment and domain information
>KOG3115 consensus Methyltransferase-like protein [General function prediction only] Back     alignment and domain information
>PF03141 Methyltransf_29: Putative S-adenosyl-L-methionine-dependent methyltransferase; InterPro: IPR004159 Members of this family of hypothetical plant proteins are putative methyltransferases Back     alignment and domain information
>PF01795 Methyltransf_5: MraW methylase family; InterPro: IPR002903 This is a family of S-adenosyl-L-methionine-dependent methyltransferases, which are found primarily, though not exclusively, in bacteria Back     alignment and domain information
>KOG1562 consensus Spermidine synthase [Amino acid transport and metabolism] Back     alignment and domain information
>PF07091 FmrO: Ribosomal RNA methyltransferase (FmrO); PDB: 3LCU_A 3LCV_B 3FRH_A 3FRI_A 3B89_A 3FZG_A Back     alignment and domain information
>KOG2187 consensus tRNA uracil-5-methyltransferase and related tRNA-modifying enzymes [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG3045 consensus Predicted RNA methylase involved in rRNA processing [RNA processing and modification] Back     alignment and domain information
>PF06962 rRNA_methylase: Putative rRNA methylase; InterPro: IPR010719 This family contains a number of putative rRNA methylases Back     alignment and domain information
>COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK11524 putative methyltransferase; Provisional Back     alignment and domain information
>COG1889 NOP1 Fibrillarin-like rRNA methylase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG1122 consensus tRNA and rRNA cytosine-C5-methylase (nucleolar protein NOL1/NOP2) [RNA processing and modification] Back     alignment and domain information
>PF04445 SAM_MT: Putative SAM-dependent methyltransferase; InterPro: IPR007536 This family of proteins is functionally uncharacterised Back     alignment and domain information
>PF04672 Methyltransf_19: S-adenosyl methyltransferase; InterPro: IPR006764 This is a family of uncharacterised proteins Back     alignment and domain information
>COG3897 Predicted methyltransferase [General function prediction only] Back     alignment and domain information
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only] Back     alignment and domain information
>KOG1099 consensus SAM-dependent methyltransferase/cell division protein FtsJ [Cell cycle control, cell division, chromosome partitioning; General function prediction only] Back     alignment and domain information
>KOG3201 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>COG1568 Predicted methyltransferases [General function prediction only] Back     alignment and domain information
>KOG1253 consensus tRNA methyltransferase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK13699 putative methylase; Provisional Back     alignment and domain information
>PF13679 Methyltransf_32: Methyltransferase domain Back     alignment and domain information
>KOG2198 consensus tRNA cytosine-5-methylases and related enzymes of the NOL1/NOP2/sun superfamily [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG1269 consensus SAM-dependent methyltransferases [Lipid transport and metabolism; General function prediction only] Back     alignment and domain information
>KOG2352 consensus Predicted spermine/spermidine synthase [Amino acid transport and metabolism] Back     alignment and domain information
>PTZ00357 methyltransferase; Provisional Back     alignment and domain information
>COG1189 Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG3987 consensus Uncharacterized conserved protein DREV/CGI-81 [Function unknown] Back     alignment and domain information
>KOG1596 consensus Fibrillarin and related nucleolar RNA-binding proteins [RNA processing and modification] Back     alignment and domain information
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] Back     alignment and domain information
>KOG4058 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional Back     alignment and domain information
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1 Back     alignment and domain information
>cd00315 Cyt_C5_DNA_methylase Cytosine-C5 specific DNA methylases; Methyl transfer reactions play an important role in many aspects of biology Back     alignment and domain information
>PF01234 NNMT_PNMT_TEMT: NNMT/PNMT/TEMT family; InterPro: IPR000940 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (AdoMet) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals Back     alignment and domain information
>PRK09880 L-idonate 5-dehydrogenase; Provisional Back     alignment and domain information
>PRK05562 precorrin-2 dehydrogenase; Provisional Back     alignment and domain information
>TIGR00518 alaDH alanine dehydrogenase Back     alignment and domain information
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase) Back     alignment and domain information
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate Back     alignment and domain information
>COG0286 HsdM Type I restriction-modification system methyltransferase subunit [Defense mechanisms] Back     alignment and domain information
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase Back     alignment and domain information
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1 Back     alignment and domain information
>PF11968 DUF3321: Putative methyltransferase (DUF3321); InterPro: IPR021867 This family is conserved in fungi and is annotated as being a nucleolar protein Back     alignment and domain information
>COG5459 Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional Back     alignment and domain information
>PHA01634 hypothetical protein Back     alignment and domain information
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family Back     alignment and domain information
>PF10354 DUF2431: Domain of unknown function (DUF2431); InterPro: IPR019446 This entry represents the N-terminal domain of a family of proteins whose function is not known Back     alignment and domain information
>PF14314 Methyltrans_Mon: Virus-capping methyltransferase Back     alignment and domain information
>PF04378 RsmJ: Ribosomal RNA small subunit methyltransferase D, RsmJ; InterPro: IPR007473 This is a bacterial protein of unknown function, possibly secreted Back     alignment and domain information
>cd08293 PTGR2 Prostaglandin reductase Back     alignment and domain information
>PF07279 DUF1442: Protein of unknown function (DUF1442); InterPro: IPR009902 This family consists of several hypothetical Arabidopsis thaliana proteins of around 225 residues in length Back     alignment and domain information
>KOG1501 consensus Arginine N-methyltransferase [General function prediction only] Back     alignment and domain information
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ] Back     alignment and domain information
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] Back     alignment and domain information
>KOG0821 consensus Predicted ribosomal RNA adenine dimethylase [RNA processing and modification] Back     alignment and domain information
>KOG1331 consensus Predicted methyltransferase [General function prediction only] Back     alignment and domain information
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase Back     alignment and domain information
>COG4121 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>KOG2671 consensus Putative RNA methylase [Replication, recombination and repair] Back     alignment and domain information
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like Back     alignment and domain information
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit Back     alignment and domain information
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members Back     alignment and domain information
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism] Back     alignment and domain information
>PF12692 Methyltransf_17: S-adenosyl-L-methionine methyltransferase; PDB: 3IHT_B Back     alignment and domain information
>PF01555 N6_N4_Mtase: DNA methylase; InterPro: IPR002941 This domain is found in DNA methylases Back     alignment and domain information
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus Back     alignment and domain information
>PLN02353 probable UDP-glucose 6-dehydrogenase Back     alignment and domain information
>cd05278 FDH_like Formaldehyde dehydrogenases Back     alignment and domain information
>PF05711 TylF: Macrocin-O-methyltransferase (TylF); InterPro: IPR008884 This family consists of bacterial macrocin O-methyltransferase (TylF) proteins Back     alignment and domain information
>PLN02740 Alcohol dehydrogenase-like Back     alignment and domain information
>KOG2078 consensus tRNA modification enzyme [RNA processing and modification] Back     alignment and domain information
>PRK10637 cysG siroheme synthase; Provisional Back     alignment and domain information
>PF11599 AviRa: RRNA methyltransferase AviRa; InterPro: IPR024268 This family of proteins includes the methyltransferase AviRa from Streptomyces viridochromogenes Back     alignment and domain information
>PRK11524 putative methyltransferase; Provisional Back     alignment and domain information
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases Back     alignment and domain information
>COG0270 Dcm Site-specific DNA methylase [DNA replication, recombination, and repair] Back     alignment and domain information
>COG2961 ComJ Protein involved in catabolism of external DNA [General function prediction only] Back     alignment and domain information
>PF06460 NSP13: Coronavirus NSP13; InterPro: IPR009461 This domain covers the NSP13 region of the coronavirus polyprotein Back     alignment and domain information
>cd05285 sorbitol_DH Sorbitol dehydrogenase Back     alignment and domain information
>PF00145 DNA_methylase: C-5 cytosine-specific DNA methylase; InterPro: IPR001525 C-5 cytosine-specific DNA methylases (2 Back     alignment and domain information
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase Back     alignment and domain information
>PLN02827 Alcohol dehydrogenase-like Back     alignment and domain information
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase Back     alignment and domain information
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1 Back     alignment and domain information
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain Back     alignment and domain information
>cd08230 glucose_DH Glucose dehydrogenase Back     alignment and domain information
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase Back     alignment and domain information
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity Back     alignment and domain information
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional Back     alignment and domain information
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1 Back     alignment and domain information
>PLN03154 putative allyl alcohol dehydrogenase; Provisional Back     alignment and domain information
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase Back     alignment and domain information
>TIGR00497 hsdM type I restriction system adenine methylase (hsdM) Back     alignment and domain information
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase Back     alignment and domain information
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase Back     alignment and domain information
>PRK07502 cyclohexadienyl dehydrogenase; Validated Back     alignment and domain information
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase Back     alignment and domain information
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases Back     alignment and domain information
>PRK08223 hypothetical protein; Validated Back     alignment and domain information
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase Back     alignment and domain information
>PRK00066 ldh L-lactate dehydrogenase; Reviewed Back     alignment and domain information
>COG4798 Predicted methyltransferase [General function prediction only] Back     alignment and domain information
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases Back     alignment and domain information
>TIGR00936 ahcY adenosylhomocysteinase Back     alignment and domain information
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated Back     alignment and domain information
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase Back     alignment and domain information
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism] Back     alignment and domain information
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion] Back     alignment and domain information
>KOG2793 consensus Putative N2,N2-dimethylguanosine tRNA methyltransferase [RNA processing and modification] Back     alignment and domain information
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B Back     alignment and domain information
>cd08234 threonine_DH_like L-threonine dehydrogenase Back     alignment and domain information
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase Back     alignment and domain information
>PRK15116 sulfur acceptor protein CsdL; Provisional Back     alignment and domain information
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase Back     alignment and domain information
>cd01487 E1_ThiF_like E1_ThiF_like Back     alignment and domain information
>PF02636 Methyltransf_28: Putative S-adenosyl-L-methionine-dependent methyltransferase; InterPro: IPR003788 This entry describes proteins of unknown function Back     alignment and domain information
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase Back     alignment and domain information
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF10237 N6-adenineMlase: Probable N6-adenine methyltransferase; InterPro: IPR019369 This family of proteins, which are of approximately 200 residues in length, contain a highly conserved Glu-Phe-Trp (QFW) motif close to the N terminus and an Asp/Asn-Pro-Pro-Tyr/Phe motif in the centre Back     alignment and domain information
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional Back     alignment and domain information
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase Back     alignment and domain information
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein Back     alignment and domain information
>PRK13699 putative methylase; Provisional Back     alignment and domain information
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase Back     alignment and domain information
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated Back     alignment and domain information
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases Back     alignment and domain information
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E Back     alignment and domain information
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E Back     alignment and domain information
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot Back     alignment and domain information
>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated Back     alignment and domain information
>KOG1227 consensus Putative methyltransferase [General function prediction only] Back     alignment and domain information
>PRK08644 thiamine biosynthesis protein ThiF; Provisional Back     alignment and domain information
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy) Back     alignment and domain information
>PRK08328 hypothetical protein; Provisional Back     alignment and domain information
>COG0677 WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases Back     alignment and domain information
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional Back     alignment and domain information
>PTZ00117 malate dehydrogenase; Provisional Back     alignment and domain information
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism] Back     alignment and domain information
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 Back     alignment and domain information
>PF03269 DUF268: Caenorhabditis protein of unknown function, DUF268; InterPro: IPR004951 This family consists of proteins of unknown function found in Caenorhabditis species Back     alignment and domain information
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional Back     alignment and domain information
>PRK06719 precorrin-2 dehydrogenase; Validated Back     alignment and domain information
>PF03141 Methyltransf_29: Putative S-adenosyl-L-methionine-dependent methyltransferase; InterPro: IPR004159 Members of this family of hypothetical plant proteins are putative methyltransferases Back     alignment and domain information
>KOG2798 consensus Putative trehalase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed Back     alignment and domain information
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases Back     alignment and domain information
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases Back     alignment and domain information
>cd05288 PGDH Prostaglandin dehydrogenases Back     alignment and domain information
>PF11899 DUF3419: Protein of unknown function (DUF3419); InterPro: IPR021829 This family of proteins are functionally uncharacterised Back     alignment and domain information
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated Back     alignment and domain information
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases Back     alignment and domain information
>PRK10458 DNA cytosine methylase; Provisional Back     alignment and domain information
>cd05298 GH4_GlvA_pagL_like Glycoside Hydrolases Family 4; GlvA- and pagL-like glycosidases Back     alignment and domain information
>cd05281 TDH Threonine dehydrogenase Back     alignment and domain information
>PRK08618 ornithine cyclodeaminase; Validated Back     alignment and domain information
>PRK10669 putative cation:proton antiport protein; Provisional Back     alignment and domain information
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like Back     alignment and domain information
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional Back     alignment and domain information
>TIGR00675 dcm DNA-methyltransferase (dcm) Back     alignment and domain information
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family Back     alignment and domain information
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members Back     alignment and domain information
>COG1565 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PRK06141 ornithine cyclodeaminase; Validated Back     alignment and domain information
>KOG1098 consensus Putative SAM-dependent rRNA methyltransferase SPB1 [RNA processing and modification; General function prediction only] Back     alignment and domain information
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase Back     alignment and domain information
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] Back     alignment and domain information
>PTZ00082 L-lactate dehydrogenase; Provisional Back     alignment and domain information
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC Back     alignment and domain information
>PRK06223 malate dehydrogenase; Reviewed Back     alignment and domain information
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism] Back     alignment and domain information
>PF06859 Bin3: Bicoid-interacting protein 3 (Bin3); InterPro: IPR010675 This entry represents a conserved region of approximately 120 residues within eukaryotic Bicoid-interacting protein 3 (Bin3) Back     alignment and domain information
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA Back     alignment and domain information
>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1 Back     alignment and domain information
>TIGR00692 tdh L-threonine 3-dehydrogenase Back     alignment and domain information
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent Back     alignment and domain information
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases Back     alignment and domain information
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] Back     alignment and domain information
>PRK08306 dipicolinate synthase subunit A; Reviewed Back     alignment and domain information
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated Back     alignment and domain information
>PRK06949 short chain dehydrogenase; Provisional Back     alignment and domain information
>PF00072 Response_reg: Response regulator receiver domain; InterPro: IPR001789 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions [] Back     alignment and domain information
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR) Back     alignment and domain information
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional Back     alignment and domain information
>PRK07340 ornithine cyclodeaminase; Validated Back     alignment and domain information
>TIGR01627 A_thal_3515 uncharacterized plant-specific domain TIGR01627 Back     alignment and domain information
>PRK06124 gluconate 5-dehydrogenase; Provisional Back     alignment and domain information
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated Back     alignment and domain information
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins Back     alignment and domain information
>PRK15057 UDP-glucose 6-dehydrogenase; Provisional Back     alignment and domain information
>COG4017 Uncharacterized protein conserved in archaea [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query369
1xj5_A334 X-Ray Structure Of Spermidine Synthase From Arabido 1e-114
2pss_A321 The Structure Of Plasmodium Falciparum Spermidine S 2e-71
2pwp_A282 Crystal Structure Of Spermidine Synthase From Plasm 2e-71
2hte_A283 The Crystal Structure Of Spermidine Synthase From P 2e-71
2o05_A304 Human Spermidine Synthase Length = 304 9e-71
3rw9_A304 Crystal Structure Of Human Spermidine Synthase In C 1e-70
2b2c_A314 Cloning, Expression, Characterisation And Three- Di 1e-69
3bwb_A304 Crystal Structure Of The Apo Form Of Spermidine Syn 3e-60
1iy9_A275 Crystal Structure Of Spermidine Synthase Length = 2 5e-41
1jq3_A296 Crystal Structure Of Spermidine Synthase In Complex 1e-39
3o4f_A294 Crystal Structure Of Spermidine Synthase From E. Co 7e-39
3anx_A314 Crystal Structure Of TriamineAGMATINE AMINOPROPYLTR 3e-29
1uir_A314 Crystal Structure Of Polyamine Aminopropyltransfeas 7e-29
1mjf_A281 Putative Spermidine Synthetase From Pyrococcus Furi 4e-26
2e5w_A280 Crystal Structure Of Spermidine Synthase From Pyroc 4e-25
>pdb|1XJ5|A Chain A, X-Ray Structure Of Spermidine Synthase From Arabidopsis Thaliana Gene At1g23820 Length = 334 Back     alignment and structure 
Iteration: 1

 Score =  408 bits (1048), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 188/305 (61%), Positives = 235/305 (77%), Gaps = 16/305 (5%)
Query: 47  CHSTVVSGWFSESQSTSDKTGKTMYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESL 106
           C STV+ GWFSE               +P WPGEAHSLKV+++LF+GKS+YQ+V+VF+S 
Sbjct: 39  CFSTVIPGWFSEX--------------SPXWPGEAHSLKVEKVLFQGKSDYQDVIVFQSA 84
Query: 107 AYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSV 166
            YGKVLVLDG++QLTE+DECAYQE I HLPLCSIP+PK             RE++RH S+
Sbjct: 85  TYGKVLVLDGVIQLTERDECAYQEXITHLPLCSIPNPKKVLVIGGGDGGVLREVARHASI 144
Query: 167 ELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSD 226
           E ID CEIDK V+DVSK++FP++A+G+EDPRV L IGD V FL+    G YDA+IVDSSD
Sbjct: 145 EQIDXCEIDKXVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVIVDSSD 204
Query: 227 PVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKGSVHYAW 286
           P+GPA+EL EKPFF ++A+ALRPGGV+C  AES+WLH  +IED++S CRE FKGSV+YAW
Sbjct: 205 PIGPAKELFEKPFFQSVARALRPGGVVCTQAESLWLHXDIIEDIVSNCREIFKGSVNYAW 264
Query: 287 ASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALP 346
            SVPTYPSG+IGF +CSTEGP VDF +P+NPI+  E + K    L+FYN+EIHSAAF LP
Sbjct: 265 TSVPTYPSGVIGFXLCSTEGPDVDFKHPLNPID--ESSSKSNGPLKFYNAEIHSAAFCLP 322
Query: 347 AFLKR 351
           +F K+
Sbjct: 323 SFAKK 327
>pdb|2PSS|A Chain A, The Structure Of Plasmodium Falciparum Spermidine Synthase In Its Apo- Form Length = 321 Back     alignment and structure
>pdb|2PWP|A Chain A, Crystal Structure Of Spermidine Synthase From Plasmodium Falciparum In Complex With Spermidine Length = 282 Back     alignment and structure
>pdb|2HTE|A Chain A, The Crystal Structure Of Spermidine Synthase From P. Falciparum In Complex With 5'-Methylthioadenosine Length = 283 Back     alignment and structure
>pdb|2O05|A Chain A, Human Spermidine Synthase Length = 304 Back     alignment and structure
>pdb|3RW9|A Chain A, Crystal Structure Of Human Spermidine Synthase In Complex With Decarboxylated S-Adenosylhomocysteine Length = 304 Back     alignment and structure
>pdb|2B2C|A Chain A, Cloning, Expression, Characterisation And Three- Dimensional Structure Determination Of The Caenorhabditis Elegans Spermidine Synthase Length = 314 Back     alignment and structure
>pdb|3BWB|A Chain A, Crystal Structure Of The Apo Form Of Spermidine Synthase From Trypanosoma Cruzi At 2.5 A Resolution Length = 304 Back     alignment and structure
>pdb|1IY9|A Chain A, Crystal Structure Of Spermidine Synthase Length = 275 Back     alignment and structure
>pdb|1JQ3|A Chain A, Crystal Structure Of Spermidine Synthase In Complex With Transition State Analogue Adodato Length = 296 Back     alignment and structure
>pdb|3O4F|A Chain A, Crystal Structure Of Spermidine Synthase From E. Coli Length = 294 Back     alignment and structure
>pdb|3ANX|A Chain A, Crystal Structure Of TriamineAGMATINE AMINOPROPYLTRANSFERASE (SPEE) From Thermus Thermophilus, Complexed With Mta Length = 314 Back     alignment and structure
>pdb|1UIR|A Chain A, Crystal Structure Of Polyamine Aminopropyltransfease From Thermus Thermophilus Length = 314 Back     alignment and structure
>pdb|1MJF|A Chain A, Putative Spermidine Synthetase From Pyrococcus Furiosus Pfu- 132382 Length = 281 Back     alignment and structure
>pdb|2E5W|A Chain A, Crystal Structure Of Spermidine Synthase From Pyrococcus Horikoshii Ot3 Length = 280 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query369
1xj5_A334 Spermidine synthase 1; structural genomics, protei 1e-166
2pt6_A321 Spermidine synthase; transferase, structural genom 1e-153
2b2c_A314 Spermidine synthase; beta-alpha, transferase; 2.50 1e-151
2o07_A304 Spermidine synthase; structural genomics, structur 1e-150
2i7c_A283 Spermidine synthase; transferase, structural genom 1e-148
3bwc_A304 Spermidine synthase; SAM, SGPP, structura genomics 1e-147
1iy9_A275 Spermidine synthase; rossmann fold, structural gen 1e-145
1inl_A296 Spermidine synthase; beta-barrel, rossman fold, st 1e-143
3adn_A294 Spermidine synthase; aminopropyltransferase, polya 1e-143
1uir_A314 Polyamine aminopropyltransferase; spermidien synth 1e-135
1mjf_A281 Spermidine synthase; spermidine synthetase, struct 1e-135
2cmg_A262 Spermidine synthase; transferase, putrescine amino 1e-111
2qfm_A364 Spermine synthase; spermidine aminopropyltransfera 2e-99
3gjy_A317 Spermidine synthase; APC62791, structural genomics 3e-51
1zx0_A236 Guanidinoacetate N-methyltransferase; structural g 3e-09
3jwh_A217 HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena 1e-08
3dr5_A221 Putative O-methyltransferase; Q8NRD3, CGL1119, PF0 3e-08
3ntv_A232 MW1564 protein; rossmann fold, putative methyltran 4e-07
2r3s_A335 Uncharacterized protein; methyltransferase domain, 1e-06
3ou2_A218 SAM-dependent methyltransferase; O-methyltransfera 2e-06
1xtp_A254 LMAJ004091AAA; SGPP, structural genomics, PSI, pro 2e-06
3dp7_A363 SAM-dependent methyltransferase; structural genomi 2e-06
4dcm_A375 Ribosomal RNA large subunit methyltransferase G; 2 8e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-05
2gpy_A233 O-methyltransferase; structural genomics, PSI, pro 1e-05
1dus_A194 MJ0882; hypothetical protein, methanococcus jannas 1e-05
3cgg_A195 SAM-dependent methyltransferase; NP_600671.1, meth 1e-05
3htx_A950 HEN1; HEN1, small RNA methyltransferase, protein-R 2e-05
3ujc_A266 Phosphoethanolamine N-methyltransferase; parasite; 2e-05
3ll7_A410 Putative methyltransferase; methytransferase, stru 2e-05
3dtn_A234 Putative methyltransferase MM_2633; structural gen 2e-05
1ve3_A227 Hypothetical protein PH0226; dimer, riken structur 2e-05
3ocj_A305 Putative exported protein; structural genomics, PS 2e-05
3c3p_A210 Methyltransferase; NP_951602.1, structural genomic 3e-05
3mcz_A352 O-methyltransferase; adomet_mtases, S-adenosylmeth 3e-05
1nkv_A256 Hypothetical protein YJHP; structural genomics, PS 4e-05
2o57_A297 Putative sarcosine dimethylglycine methyltransfera 4e-05
3d2l_A243 SAM-dependent methyltransferase; ZP_00538691.1, st 5e-05
3bxo_A239 N,N-dimethyltransferase; desosamine, sugar, carboh 6e-05
3tfw_A248 Putative O-methyltransferase; PSI-biology, nysgrc, 7e-05
3jwg_A219 HEN1, methyltransferase type 12; 1.90A {Clostridiu 7e-05
2ex4_A241 Adrenal gland protein AD-003; methyltransferase, s 8e-05
3h2b_A203 SAM-dependent methyltransferase; alpha-beta protei 1e-04
3duw_A223 OMT, O-methyltransferase, putative; alternating of 1e-04
3fpf_A298 Mtnas, putative uncharacterized protein; thermonic 1e-04
3g2m_A299 PCZA361.24; SAM-dependent methyltransferase, glyco 1e-04
3kkz_A267 Uncharacterized protein Q5LES9; putative methyltra 2e-04
3f4k_A257 Putative methyltransferase; structural genomics, P 2e-04
2ip2_A334 Probable phenazine-specific methyltransferase; pyo 2e-04
3vc1_A312 Geranyl diphosphate 2-C-methyltransferase; rossman 2e-04
3cbg_A232 O-methyltransferase; cyanobacterium; HET: SAH FER 2e-04
1y8c_A246 S-adenosylmethionine-dependent methyltransferase; 3e-04
3m33_A226 Uncharacterized protein; structural genomics, PSI- 4e-04
3hnr_A220 Probable methyltransferase BT9727_4108; structural 4e-04
3gwz_A369 MMCR; methyltransferase, mitomycin, S-adenosyl met 4e-04
1wzn_A252 SAM-dependent methyltransferase; structural genomi 4e-04
3tr6_A225 O-methyltransferase; cellular processes; HET: SAH; 4e-04
1qzz_A374 RDMB, aclacinomycin-10-hydroxylase; anthracycline, 4e-04
3c3y_A237 Pfomt, O-methyltransferase; plant secondary metabo 5e-04
3e23_A211 Uncharacterized protein RPA2492; alpha-beta protei 5e-04
2p8j_A209 S-adenosylmethionine-dependent methyltransferase; 6e-04
3bus_A273 REBM, methyltransferase; rebeccamycin synthesis; H 6e-04
1sui_A247 Caffeoyl-COA O-methyltransferase; rossmann fold, p 6e-04
3pfg_A263 N-methyltransferase; N,N-dimethyltransferase, SAM 8e-04
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A Length = 334 Back     alignment and structure
 Score =  466 bits (1201), Expect = e-166
 Identities = 203/342 (59%), Positives = 260/342 (76%), Gaps = 16/342 (4%)

Query: 12  QKTMDGKESNKNGSAGAIPSCCLKARASAPELDAKCHSTVVSGWFSESQSTSDKTGKTMY 71
           ++T                +  ++      + +  C STV+ GWFSE             
Sbjct: 4   KETSATDLKRPREEDDNGGAATMETENGDQKKEPACFSTVIPGWFSEMS----------- 52

Query: 72  FNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEM 131
              PMWPGEAHSLKV+++LF+GKS+YQ+V+VF+S  YGKVLVLDG++QLTE+DECAYQEM
Sbjct: 53  ---PMWPGEAHSLKVEKVLFQGKSDYQDVIVFQSATYGKVLVLDGVIQLTERDECAYQEM 109

Query: 132 IAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAV 191
           I HLPLCSIP+PK VLV+GGGDGGVLRE++RH S+E ID+CEIDKMV+DVSK++FP++A+
Sbjct: 110 ITHLPLCSIPNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAI 169

Query: 192 GFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGG 251
           G+EDPRV L IGD V FL+    G YDA+IVDSSDP+GPA+EL EKPFF ++A+ALRPGG
Sbjct: 170 GYEDPRVNLVIGDGVAFLKNAAEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGG 229

Query: 252 VLCNMAESMWLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDF 311
           V+C  AES+WLH  +IED++S CRE FKGSV+YAW SVPTYPSG+IGF++CSTEGP VDF
Sbjct: 230 VVCTQAESLWLHMDIIEDIVSNCREIFKGSVNYAWTSVPTYPSGVIGFMLCSTEGPDVDF 289

Query: 312 VNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFLKREV 353
            +P+NPI+  E + K    L+FYN+EIHSAAF LP+F K+ +
Sbjct: 290 KHPLNPID--ESSSKSNGPLKFYNAEIHSAAFCLPSFAKKVI 329
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A* Length = 321 Back     alignment and structure
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17 Length = 314 Back     alignment and structure
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A* Length = 304 Back     alignment and structure
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A* Length = 283 Back     alignment and structure
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A* Length = 304 Back     alignment and structure
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17 Length = 275 Back     alignment and structure
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A* Length = 296 Back     alignment and structure
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A* Length = 314 Back     alignment and structure
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A* Length = 281 Back     alignment and structure
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A Length = 262 Back     alignment and structure
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032} Length = 317 Back     alignment and structure
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} SCOP: c.66.1.16 PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A* Length = 236 Back     alignment and structure
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A Length = 217 Back     alignment and structure
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum} Length = 221 Back     alignment and structure
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus} Length = 232 Back     alignment and structure
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme} Length = 335 Back     alignment and structure
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A* Length = 218 Back     alignment and structure
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42 Length = 254 Back     alignment and structure
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus} Length = 363 Back     alignment and structure
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli} Length = 375 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans} Length = 233 Back     alignment and structure
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4 Length = 194 Back     alignment and structure
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032} Length = 195 Back     alignment and structure
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana} Length = 950 Back     alignment and structure
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A* Length = 266 Back     alignment and structure
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis} Length = 410 Back     alignment and structure
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei} Length = 234 Back     alignment and structure
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43 Length = 227 Back     alignment and structure
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis} Length = 305 Back     alignment and structure
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca} Length = 210 Back     alignment and structure
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis} Length = 352 Back     alignment and structure
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21 Length = 256 Back     alignment and structure
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18 Length = 297 Back     alignment and structure
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15} Length = 243 Back     alignment and structure
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae} Length = 239 Back     alignment and structure
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp} Length = 248 Back     alignment and structure
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A Length = 219 Back     alignment and structure
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42 Length = 241 Back     alignment and structure
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032} Length = 203 Back     alignment and structure
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A* Length = 223 Back     alignment and structure
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A* Length = 298 Back     alignment and structure
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A* Length = 299 Back     alignment and structure
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A* Length = 267 Back     alignment and structure
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A* Length = 257 Back     alignment and structure
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa} Length = 334 Back     alignment and structure
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* Length = 312 Back     alignment and structure
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP} Length = 232 Back     alignment and structure
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43 Length = 246 Back     alignment and structure
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans} Length = 226 Back     alignment and structure
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian} Length = 220 Back     alignment and structure
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A* Length = 369 Back     alignment and structure
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43 Length = 252 Back     alignment and structure
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} Length = 225 Back     alignment and structure
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A* Length = 374 Back     alignment and structure
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum} Length = 237 Back     alignment and structure
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris} Length = 211 Back     alignment and structure
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum} Length = 209 Back     alignment and structure
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes} Length = 273 Back     alignment and structure
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A* Length = 247 Back     alignment and structure
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A* Length = 263 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query369
3o4f_A294 Spermidine synthase; aminopropyltransferase, polya 100.0
3adn_A294 Spermidine synthase; aminopropyltransferase, polya 100.0
1xj5_A334 Spermidine synthase 1; structural genomics, protei 100.0
2i7c_A283 Spermidine synthase; transferase, structural genom 100.0
2b2c_A314 Spermidine synthase; beta-alpha, transferase; 2.50 100.0
2o07_A304 Spermidine synthase; structural genomics, structur 100.0
1iy9_A275 Spermidine synthase; rossmann fold, structural gen 100.0
2pt6_A321 Spermidine synthase; transferase, structural genom 100.0
1inl_A296 Spermidine synthase; beta-barrel, rossman fold, st 100.0
3bwc_A304 Spermidine synthase; SAM, SGPP, structura genomics 100.0
1uir_A314 Polyamine aminopropyltransferase; spermidien synth 100.0
1mjf_A281 Spermidine synthase; spermidine synthetase, struct 100.0
2cmg_A262 Spermidine synthase; transferase, putrescine amino 100.0
3c6k_A381 Spermine synthase; spermidine aminopropyltransfera 100.0
2qfm_A364 Spermine synthase; spermidine aminopropyltransfera 100.0
3gjy_A317 Spermidine synthase; APC62791, structural genomics 100.0
3orh_A236 Guanidinoacetate N-methyltransferase; structura ge 99.6
3duw_A223 OMT, O-methyltransferase, putative; alternating of 99.59
3tfw_A248 Putative O-methyltransferase; PSI-biology, nysgrc, 99.59
3c3y_A237 Pfomt, O-methyltransferase; plant secondary metabo 99.56
3dxy_A218 TRNA (guanine-N(7)-)-methyltransferase; rossmann f 99.56
1sui_A247 Caffeoyl-COA O-methyltransferase; rossmann fold, p 99.55
3p9n_A189 Possible methyltransferase (methylase); RV2966C, a 99.55
3ntv_A232 MW1564 protein; rossmann fold, putative methyltran 99.54
1yzh_A214 TRNA (guanine-N(7)-)-methyltransferase; alpha-beta 99.54
2fca_A213 TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bac 99.54
3c3p_A210 Methyltransferase; NP_951602.1, structural genomic 99.54
3dr5_A221 Putative O-methyltransferase; Q8NRD3, CGL1119, PF0 99.53
3r3h_A242 O-methyltransferase, SAM-dependent; structural gen 99.52
4gek_A261 TRNA (CMO5U34)-methyltransferase; structural genom 99.5
3tr6_A225 O-methyltransferase; cellular processes; HET: SAH; 99.5
2ozv_A260 Hypothetical protein ATU0636; structural genomics, 99.49
1dus_A194 MJ0882; hypothetical protein, methanococcus jannas 99.48
2avd_A229 Catechol-O-methyltransferase; structural genomics, 99.47
3ckk_A235 TRNA (guanine-N(7)-)-methyltransferase; mettl1, S- 99.47
1zx0_A236 Guanidinoacetate N-methyltransferase; structural g 99.47
2b3t_A276 Protein methyltransferase HEMK; translation termin 99.47
3cbg_A232 O-methyltransferase; cyanobacterium; HET: SAH FER 99.46
3u81_A221 Catechol O-methyltransferase; neurotransmitter deg 99.46
4hg2_A257 Methyltransferase type 11; structural genomics, PS 99.46
3mti_A185 RRNA methylase; SAM-dependent, PSI, MCSG, structur 99.45
3lpm_A259 Putative methyltransferase; structural genomics, p 99.45
3e05_A204 Precorrin-6Y C5,15-methyltransferase (decarboxyla; 99.44
2hnk_A239 SAM-dependent O-methyltransferase; modified rossma 99.44
2frn_A278 Hypothetical protein PH0793; structural genomics, 99.44
3hm2_A178 Precorrin-6Y C5,15-methyltransferase; alpha-beta-s 99.43
1xdz_A240 Methyltransferase GIDB; MCSG, protein structure in 99.43
2vdv_E246 TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl 99.41
2fhp_A187 Methylase, putative; alpha-beta-alpha sandwich, st 99.41
3fpf_A298 Mtnas, putative uncharacterized protein; thermonic 99.41
3g89_A249 Ribosomal RNA small subunit methyltransferase G; 1 99.4
2igt_A332 SAM dependent methyltransferase; alpha-beta sandwi 99.4
3njr_A204 Precorrin-6Y methylase; methyltransferase, decarbo 99.4
2esr_A177 Methyltransferase; structural genomics, hypothetic 99.4
3dlc_A219 Putative S-adenosyl-L-methionine-dependent methylt 99.39
2ift_A201 Putative methylase HI0767; NESG, Y767_haein, struc 99.39
2gpy_A233 O-methyltransferase; structural genomics, PSI, pro 99.38
3eey_A197 Putative rRNA methylase; rRNA methylation, S-adeno 99.38
4dzr_A215 Protein-(glutamine-N5) methyltransferase, release 99.37
3f4k_A257 Putative methyltransferase; structural genomics, P 99.37
2b78_A385 Hypothetical protein SMU.776; structure genomics, 99.37
3evz_A230 Methyltransferase; NYSGXRC, NEW YORK SGX research 99.37
3kkz_A267 Uncharacterized protein Q5LES9; putative methyltra 99.37
1ws6_A171 Methyltransferase; structural genomics, riken stru 99.37
1nv8_A284 HEMK protein; class I adoMet-dependent methyltrans 99.36
2fpo_A202 Methylase YHHF; structural genomics, putative meth 99.36
3dtn_A234 Putative methyltransferase MM_2633; structural gen 99.35
3mb5_A255 SAM-dependent methyltransferase; RNA methyltransfe 99.35
3hem_A302 Cyclopropane-fatty-acyl-phospholipid synthase 2; p 99.35
3jwg_A219 HEN1, methyltransferase type 12; 1.90A {Clostridiu 99.34
1l3i_A192 Precorrin-6Y methyltransferase/putative decarboxyl 99.33
3a27_A272 TYW2, uncharacterized protein MJ1557; wybutosine m 99.33
3jwh_A217 HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena 99.32
1ve3_A227 Hypothetical protein PH0226; dimer, riken structur 99.32
4dcm_A375 Ribosomal RNA large subunit methyltransferase G; 2 99.32
1nt2_A210 Fibrillarin-like PRE-rRNA processing protein; adeM 99.32
1jsx_A207 Glucose-inhibited division protein B; methyltransf 99.32
2bm8_A236 Cephalosporin hydroxylase CMCI; cephamycin biosynt 99.31
3grz_A205 L11 mtase, ribosomal protein L11 methyltransferase 99.31
3mgg_A276 Methyltransferase; NYSGXRC, PSI-II, protein struct 99.31
1vl5_A260 Unknown conserved protein BH2331; putative methylt 99.31
3ofk_A216 Nodulation protein S; NODS, N-methyltransferase, S 99.31
1g8a_A227 Fibrillarin-like PRE-rRNA processing protein; rRNA 99.3
3dli_A240 Methyltransferase; PSI-II, NYSGXRC, structural gen 99.3
3sm3_A235 SAM-dependent methyltransferases; NESG, structural 99.3
2nxc_A254 L11 mtase, ribosomal protein L11 methyltransferase 99.3
3g07_A292 7SK snRNA methylphosphate capping enzyme; structur 99.3
3g5l_A253 Putative S-adenosylmethionine dependent methyltran 99.3
4htf_A285 S-adenosylmethionine-dependent methyltransferase; 99.29
1yb2_A275 Hypothetical protein TA0852; structural genomics, 99.29
1pjz_A203 Thiopurine S-methyltransferase; polymorphism, S-ad 99.29
3lbf_A210 Protein-L-isoaspartate O-methyltransferase; modifi 99.28
2ex4_A241 Adrenal gland protein AD-003; methyltransferase, s 99.28
2b25_A336 Hypothetical protein; structural genomics, methyl 99.28
1nkv_A256 Hypothetical protein YJHP; structural genomics, PS 99.28
3g5t_A299 Trans-aconitate 3-methyltransferase; structural ge 99.28
3dh0_A219 SAM dependent methyltransferase; cystal structure, 99.28
3e23_A211 Uncharacterized protein RPA2492; alpha-beta protei 99.28
3bus_A273 REBM, methyltransferase; rebeccamycin synthesis; H 99.27
4dmg_A393 Putative uncharacterized protein TTHA1493; rRNA, m 99.27
2yxd_A183 Probable cobalt-precorrin-6Y C(15)-methyltransfer 99.27
2gb4_A252 Thiopurine S-methyltransferase; 18204406, thiopuri 99.27
3k6r_A278 Putative transferase PH0793; structural genomics, 99.26
3ujc_A266 Phosphoethanolamine N-methyltransferase; parasite; 99.26
1fbn_A230 MJ fibrillarin homologue; MJ proteins, ribosomal R 99.26
2p7i_A250 Hypothetical protein; putative methyltransferase, 99.26
3gu3_A284 Methyltransferase; alpha-beta protein, structural 99.26
3hnr_A220 Probable methyltransferase BT9727_4108; structural 99.26
3dmg_A381 Probable ribosomal RNA small subunit methyltransf; 99.26
3ocj_A305 Putative exported protein; structural genomics, PS 99.25
1kpg_A287 CFA synthase;, cyclopropane-fatty-acyl-phospholipi 99.25
3h2b_A203 SAM-dependent methyltransferase; alpha-beta protei 99.25
3i9f_A170 Putative type 11 methyltransferase; structural gen 99.25
1o54_A277 SAM-dependent O-methyltransferase; TM0748, structu 99.25
2xvm_A199 Tellurite resistance protein TEHB; antibiotic resi 99.25
2as0_A396 Hypothetical protein PH1915; RNA methyltransferase 99.24
2yqz_A263 Hypothetical protein TTHA0223; RNA methyltransfera 99.24
1xxl_A239 YCGJ protein; structural genomics, protein structu 99.24
2vdw_A302 Vaccinia virus capping enzyme D1 subunit; nucleoti 99.24
3lcc_A235 Putative methyl chloride transferase; halide methy 99.24
3vc1_A312 Geranyl diphosphate 2-C-methyltransferase; rossman 99.24
3e8s_A227 Putative SAM dependent methyltransferase; NP_74470 99.23
1wxx_A382 TT1595, hypothetical protein TTHA1280; thermus the 99.23
2yvl_A248 TRMI protein, hypothetical protein; tRNA, methyltr 99.23
3l8d_A242 Methyltransferase; structural genomics, PSI, nysgr 99.23
3d2l_A243 SAM-dependent methyltransferase; ZP_00538691.1, st 99.23
2pwy_A258 TRNA (adenine-N(1)-)-methyltransferase; mtase, ado 99.23
2pxx_A215 Uncharacterized protein MGC2408; structural genomi 99.23
2p35_A259 Trans-aconitate 2-methyltransferase; SAM dependent 99.23
4fsd_A383 Arsenic methyltransferase; rossmann fold; 1.75A {C 99.23
3bkw_A243 MLL3908 protein, S-adenosylmethionine dependent me 99.23
2p8j_A209 S-adenosylmethionine-dependent methyltransferase; 99.22
3q7e_A349 Protein arginine N-methyltransferase 1; HET: SAH; 99.22
3c0k_A396 UPF0064 protein YCCW; PUA domain, adoMet dependent 99.22
3m70_A286 Tellurite resistance protein TEHB homolog; structu 99.22
2o57_A297 Putative sarcosine dimethylglycine methyltransfera 99.22
4df3_A233 Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; 99.22
1xtp_A254 LMAJ004091AAA; SGPP, structural genomics, PSI, pro 99.22
3ajd_A274 Putative methyltransferase MJ0026; tRNA, M5C, ross 99.22
2qm3_A373 Predicted methyltransferase; putative methyltransf 99.22
2yx1_A336 Hypothetical protein MJ0883; methyl transferase, t 99.21
3cgg_A195 SAM-dependent methyltransferase; NP_600671.1, meth 99.21
3ggd_A245 SAM-dependent methyltransferase; YP_325210.1, stru 99.21
2fk8_A318 Methoxy mycolic acid synthase 4; S-adenosylmethion 99.21
3ou2_A218 SAM-dependent methyltransferase; O-methyltransfera 99.21
2ipx_A233 RRNA 2'-O-methyltransferase fibrillarin; FBL, stru 99.21
3pfg_A263 N-methyltransferase; N,N-dimethyltransferase, SAM 99.21
3tma_A354 Methyltransferase; thump domain; 2.05A {Thermus th 99.2
1i9g_A280 Hypothetical protein RV2118C; mtase, adoMet, cryst 99.2
2fyt_A340 Protein arginine N-methyltransferase 3; structural 99.2
1ri5_A298 MRNA capping enzyme; methyltransferase, M7G, messe 99.2
1wzn_A252 SAM-dependent methyltransferase; structural genomi 99.2
3r0q_C376 Probable protein arginine N-methyltransferase 4.2; 99.2
3kr9_A225 SAM-dependent methyltransferase; class I rossmann- 99.2
3thr_A293 Glycine N-methyltransferase; GNMT, folate, methylt 99.19
2pjd_A343 Ribosomal RNA small subunit methyltransferase C; g 99.19
3gdh_A241 Trimethylguanosine synthase homolog; M7G, CAP, dim 99.19
2kw5_A202 SLR1183 protein; structural genomics, northeast st 99.18
3ccf_A279 Cyclopropane-fatty-acyl-phospholipid synthase; YP_ 99.18
1dl5_A317 Protein-L-isoaspartate O-methyltransferase; isoasp 99.18
3v97_A703 Ribosomal RNA large subunit methyltransferase L; Y 99.17
2yxe_A215 Protein-L-isoaspartate O-methyltransferase; rossma 99.17
3gnl_A244 Uncharacterized protein, DUF633, LMOF2365_1472; st 99.17
3g2m_A299 PCZA361.24; SAM-dependent methyltransferase, glyco 99.17
1y8c_A246 S-adenosylmethionine-dependent methyltransferase; 99.17
3dou_A191 Ribosomal RNA large subunit methyltransferase J; c 99.17
2qy6_A257 UPF0209 protein YFCK; structural genomics, unknown 99.16
3lec_A230 NADB-rossmann superfamily protein; PSI, MCSG, stru 99.16
2qe6_A274 Uncharacterized protein TFU_2867; putative methylt 99.15
1o9g_A250 RRNA methyltransferase; antibiotic resistance, Se- 99.15
2h00_A254 Methyltransferase 10 domain containing protein; st 99.15
2pbf_A227 Protein-L-isoaspartate O-methyltransferase beta-A 99.15
1r18_A227 Protein-L-isoaspartate(D-aspartate)-O-methyltrans; 99.15
3m33_A226 Uncharacterized protein; structural genomics, PSI- 99.15
3fzg_A200 16S rRNA methylase; methyltransferase, plasmid, tr 99.15
1ixk_A315 Methyltransferase; open beta sheet; 1.90A {Pyrococ 99.15
3bxo_A239 N,N-dimethyltransferase; desosamine, sugar, carboh 99.15
1vbf_A231 231AA long hypothetical protein-L-isoaspartate O- 99.14
3id6_C232 Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; 99.14
1wy7_A207 Hypothetical protein PH1948; seven-stranded beta s 99.13
1i1n_A226 Protein-L-isoaspartate O-methyltransferase; S-aden 99.13
3bgv_A313 MRNA CAP guanine-N7 methyltransferase; alternative 99.13
3uwp_A438 Histone-lysine N-methyltransferase, H3 lysine-79; 99.13
2avn_A260 Ubiquinone/menaquinone biosynthesis methyltransfe 99.13
3p2e_A225 16S rRNA methylase; methyltransferase, transferase 99.13
1ej0_A180 FTSJ; methyltransferase, adoMet, adenosyl methioni 99.13
3dp7_A363 SAM-dependent methyltransferase; structural genomi 99.12
2gs9_A211 Hypothetical protein TT1324; methyl transferase, s 99.12
1jg1_A235 PIMT;, protein-L-isoaspartate O-methyltransferase; 99.12
1g6q_1328 HnRNP arginine N-methyltransferase; SAM-binding do 99.12
1ne2_A200 Hypothetical protein TA1320; structural genomics, 99.11
2plw_A201 Ribosomal RNA methyltransferase, putative; malaria 99.1
2y1w_A348 Histone-arginine methyltransferase CARM1; histone 99.1
3q87_B170 N6 adenine specific DNA methylase; SAM-methyltrans 99.09
4hc4_A376 Protein arginine N-methyltransferase 6; HRMT1L6, S 99.09
3m6w_A 464 RRNA methylase; rRNA methyltransferase, 5-methylcy 99.09
3cc8_A230 Putative methyltransferase; structural genomics, j 99.07
3ege_A261 Putative methyltransferase from antibiotic biosyn 99.07
3iv6_A261 Putative Zn-dependent alcohol dehydrogenase; alpha 99.07
3bkx_A275 SAM-dependent methyltransferase; YP_807781.1, cycl 99.07
3i53_A332 O-methyltransferase; CO-complex, rossmann-like fol 99.07
1p91_A269 Ribosomal RNA large subunit methyltransferase A; R 99.07
2dul_A 378 N(2),N(2)-dimethylguanosine tRNA methyltransferas; 99.06
2aot_A292 HMT, histamine N-methyltransferase; classic methyl 99.05
3mq2_A218 16S rRNA methyltransferase; methyltranferase, ribo 99.05
1u2z_A433 Histone-lysine N-methyltransferase, H3 lysine-79 s 99.05
3m4x_A 456 NOL1/NOP2/SUN family protein; mtase domain, PUA do 99.05
3gwz_A369 MMCR; methyltransferase, mitomycin, S-adenosyl met 99.05
2a14_A263 Indolethylamine N-methyltransferase; SGC,INMT, str 99.04
1qzz_A374 RDMB, aclacinomycin-10-hydroxylase; anthracycline, 99.03
3bzb_A281 Uncharacterized protein; RED ALGA, protein structu 99.02
2nyu_A196 Putative ribosomal RNA methyltransferase 2; SAM, s 99.02
2yxl_A450 PH0851 protein, 450AA long hypothetical FMU protei 99.02
2ip2_A334 Probable phenazine-specific methyltransferase; pyo 99.02
2i62_A265 Nicotinamide N-methyltransferase; structural genom 99.02
3mcz_A352 O-methyltransferase; adomet_mtases, S-adenosylmeth 99.02
3axs_A 392 Probable N(2),N(2)-dimethylguanosine tRNA methylt 99.01
3hp7_A291 Hemolysin, putative; structural genomics, APC64019 99.01
1sqg_A429 SUN protein, FMU protein; rossmann-fold, mixed bet 99.01
2frx_A 479 Hypothetical protein YEBU; rossmann-type S-adenosy 99.01
3bt7_A369 TRNA (uracil-5-)-methyltransferase; methyluridine, 99.0
2r3s_A335 Uncharacterized protein; methyltransferase domain, 98.99
1tw3_A360 COMT, carminomycin 4-O-methyltransferase; anthracy 98.99
2f8l_A344 Hypothetical protein LMO1582; structural genomics, 98.99
1x19_A359 CRTF-related protein; methyltransferase, bacterioc 98.98
2g72_A289 Phenylethanolamine N-methyltransferase; HET: SAM F 98.97
3tm4_A373 TRNA (guanine N2-)-methyltransferase TRM14; rossma 98.96
3b3j_A 480 Histone-arginine methyltransferase CARM1; protein 98.95
2ih2_A 421 Modification methylase TAQI; DNA, DNA methyltransf 98.94
3htx_A950 HEN1; HEN1, small RNA methyltransferase, protein-R 98.94
3opn_A232 Putative hemolysin; structural genomics, PSI-2, pr 98.94
3sso_A419 Methyltransferase; macrolide, natural product, ros 98.94
2wa2_A276 Non-structural protein 5; transferase, S-adenosyl- 98.93
2oxt_A265 Nucleoside-2'-O-methyltransferase; flavivirus, vir 98.92
1vlm_A219 SAM-dependent methyltransferase; possible histamin 98.92
3lcv_B281 Sisomicin-gentamicin resistance methylase SGM; ant 98.9
4e2x_A416 TCAB9; kijanose, tetronitrose, tetradeoxy sugar, s 98.88
2p41_A305 Type II methyltransferase; vizier, viral enzymes i 98.88
3cvo_A202 Methyltransferase-like protein of unknown functio; 98.88
1uwv_A433 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA m 98.87
2jjq_A425 Uncharacterized RNA methyltransferase pyrab10780; 98.87
3lst_A348 CALO1 methyltransferase; calicheamicin, enediyne, 98.87
4a6d_A353 Hydroxyindole O-methyltransferase; melatonin, circ 98.84
1af7_A274 Chemotaxis receptor methyltransferase CHER; chemot 98.83
1zq9_A285 Probable dimethyladenosine transferase; SGC, struc 98.83
3giw_A277 Protein of unknown function DUF574; rossmann-fold 98.82
3reo_A368 (ISO)eugenol O-methyltransferase; directed evoluti 98.8
3ldu_A385 Putative methylase; structural genomics, PSI-2, pr 98.78
3p9c_A364 Caffeic acid O-methyltransferase; S-adenosylmethio 98.78
1fp1_D372 Isoliquiritigenin 2'-O-methyltransferase; protein- 98.76
3vyw_A308 MNMC2; tRNA wobble uridine, modification enzyme, g 98.76
1fp2_A352 Isoflavone O-methyltransferase; protein-product co 98.76
3k0b_A393 Predicted N6-adenine-specific DNA methylase; methy 98.76
3ldg_A384 Putative uncharacterized protein SMU.472; YPSC, me 98.76
3frh_A253 16S rRNA methylase; methyltransferase domain, heli 98.75
2zfu_A215 Nucleomethylin, cerebral protein 1; nucleolar prot 98.75
4azs_A 569 Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 98.75
2xyq_A290 Putative 2'-O-methyl transferase; transferase-vira 98.74
1m6y_A301 S-adenosyl-methyltransferase MRAW; SAM-dependent m 98.73
2b9e_A309 NOL1/NOP2/SUN domain family, member 5 isoform 2; m 98.72
3gru_A295 Dimethyladenosine transferase; rossman fold, ribos 98.71
3ll7_A410 Putative methyltransferase; methytransferase, stru 98.69
2r6z_A258 UPF0341 protein in RSP 3' region; alpha-beta prote 98.69
2okc_A445 Type I restriction enzyme stysji M protein; NP_813 98.69
2h1r_A299 Dimethyladenosine transferase, putative; SGC toron 98.67
3tqs_A255 Ribosomal RNA small subunit methyltransferase A; p 98.64
1zg3_A358 Isoflavanone 4'-O-methyltransferase; rossman fold, 98.59
3fut_A271 Dimethyladenosine transferase; methyltransferase, 98.58
2wk1_A282 NOVP; transferase, O-methyltransferase, novobiocin 98.55
1yub_A245 Ermam, rRNA methyltransferase; MLS antibiotics; NM 98.54
2ld4_A176 Anamorsin; methyltransferase-like fold, alpha/beta 98.54
4fzv_A359 Putative methyltransferase NSUN4; mterf fold, meth 98.54
1qam_A244 ERMC' methyltransferase; rRNA methyltransferase ER 98.52
2oyr_A258 UPF0341 protein YHIQ; alpha-beta protein, structur 98.51
3khk_A544 Type I restriction-modification system methylation 98.49
3v97_A 703 Ribosomal RNA large subunit methyltransferase L; Y 98.49
3ftd_A249 Dimethyladenosine transferase; KSGA, rossmann-like 98.46
3lkd_A542 Type I restriction-modification system methyltrans 98.44
2ar0_A 541 M.ecoki, type I restriction enzyme ecoki M protein 98.41
3s1s_A 878 Restriction endonuclease bpusi; PD--(D/E)XK cataly 98.35
3evf_A277 RNA-directed RNA polymerase NS5; NS5 methyltransfe 98.34
2oo3_A283 Protein involved in catabolism of external DNA; st 98.29
3uzu_A279 Ribosomal RNA small subunit methyltransferase A; s 98.27
1qyr_A252 KSGA, high level kasugamycin resistance protein, S 98.27
3gcz_A282 Polyprotein; flavivirus, RNA capping, methyltransf 98.24
4gqb_A637 Protein arginine N-methyltransferase 5; TIM barrel 98.23
3ua3_A745 Protein arginine N-methyltransferase 5; TIM-barrel 98.2
1wg8_A285 Predicted S-adenosylmethionine-dependent methyltra 98.09
3eld_A300 Methyltransferase; flavivirus, RNA capping, guanyl 98.06
3ps9_A 676 TRNA 5-methylaminomethyl-2-thiouridine biosynthes 97.91
3pvc_A 689 TRNA 5-methylaminomethyl-2-thiouridine biosynthes 97.81
2px2_A269 Genome polyprotein [contains: capsid protein C (co 97.79
3r24_A344 NSP16, 2'-O-methyl transferase; methyltransferase, 97.61
3p8z_A267 Mtase, non-structural protein 5; methyltransferase 97.56
4auk_A375 Ribosomal RNA large subunit methyltransferase M; Y 97.52
3ufb_A530 Type I restriction-modification system methyltran 97.44
1i4w_A353 Mitochondrial replication protein MTF1; mitochondr 97.4
3lkz_A321 Non-structural protein 5; flavivirus, methyltransf 97.38
3tka_A347 Ribosomal RNA small subunit methyltransferase H; H 97.28
3tos_A257 CALS11; methyltransferase, calicheamicin, structur 97.17
2efj_A384 3,7-dimethylxanthine methyltransferase; SAM-depend 97.14
3b5i_A374 S-adenosyl-L-methionine:salicylic acid carboxyl me 97.12
2zig_A297 TTHA0409, putative modification methylase; methylt 96.96
1g55_A 343 DNA cytosine methyltransferase DNMT2; human DNA me 96.91
2k4m_A153 TR8_protein, UPF0146 protein MTH_1000; alpha+beta, 96.9
1m6e_X359 S-adenosyl-L-methionnine:salicylic acid carboxyl m 96.78
1f8f_A371 Benzyl alcohol dehydrogenase; rossmann fold, oxido 96.71
1pl8_A356 Human sorbitol dehydrogenase; NAD, oxidoreductase; 96.51
4ej6_A370 Putative zinc-binding dehydrogenase; structural ge 96.44
3m6i_A363 L-arabinitol 4-dehydrogenase; medium chain dehydro 96.43
3g7u_A 376 Cytosine-specific methyltransferase; DNA-binding, 96.34
3s2e_A340 Zinc-containing alcohol dehydrogenase superfamily; 96.3
3fpc_A352 NADP-dependent alcohol dehydrogenase; oxydoreducta 96.28
2c7p_A327 Modification methylase HHAI; DNA methyltransferase 96.07
1boo_A 323 Protein (N-4 cytosine-specific methyltransferase P 96.03
3uko_A378 Alcohol dehydrogenase class-3; alcohol dehydrogena 96.01
2dph_A398 Formaldehyde dismutase; dismutation of aldehydes, 95.97
1eg2_A 319 Modification methylase RSRI; rossmann fold, exocyc 95.93
4h0n_A333 DNMT2; SAH binding, transferase; HET: SAH; 2.71A { 95.91
1cdo_A374 Alcohol dehydrogenase; oxidoreductase, oxidoreduct 95.84
2jhf_A374 Alcohol dehydrogenase E chain; oxidoreductase, met 95.83
1g60_A260 Adenine-specific methyltransferase MBOIIA; structu 95.8
4eez_A348 Alcohol dehydrogenase 1; site-saturation mutagenes 95.78
1p0f_A373 NADP-dependent alcohol dehydrogenase; ADH topology 95.74
2fzw_A373 Alcohol dehydrogenase class III CHI chain; S-nitro 95.68
3jv7_A345 ADH-A; dehydrogenase, nucleotide binding, rossmann 95.68
1e3i_A376 Alcohol dehydrogenase, class II; HET: NAD; 2.08A { 95.64
2zig_A297 TTHA0409, putative modification methylase; methylt 95.62
1e3j_A352 NADP(H)-dependent ketose reductase; oxidoreductase 95.59
3qv2_A327 5-cytosine DNA methyltransferase; DNMT2, ehmeth; H 95.55
1g60_A260 Adenine-specific methyltransferase MBOIIA; structu 95.51
1pqw_A198 Polyketide synthase; rossmann fold, dimer, structu 95.49
3ip1_A404 Alcohol dehydrogenase, zinc-containing; structural 95.47
2b5w_A357 Glucose dehydrogenase; nucleotide binding motif, o 95.45
4a2c_A346 Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc 95.4
4dvj_A363 Putative zinc-dependent alcohol dehydrogenase Pro; 95.31
1kol_A398 Formaldehyde dehydrogenase; oxidoreductase; HET: N 95.29
1vj0_A380 Alcohol dehydrogenase, zinc-containing; TM0436, st 95.25
2d8a_A348 PH0655, probable L-threonine 3-dehydrogenase; pyro 95.18
4b7c_A336 Probable oxidoreductase; NADP cofactor, rossmann f 95.15
3uog_A363 Alcohol dehydrogenase; structural genomics, protei 95.08
2dq4_A343 L-threonine 3-dehydrogenase; NAD-dependent, oxidor 94.92
1v3u_A333 Leukotriene B4 12- hydroxydehydrogenase/prostaglan 94.92
1pjc_A361 Protein (L-alanine dehydrogenase); oxidoreductase, 94.92
2h6e_A344 ADH-4, D-arabinose 1-dehydrogenase; rossman fold, 94.85
2c0c_A362 Zinc binding alcohol dehydrogenase, domain contain 94.78
1uuf_A369 YAHK, zinc-type alcohol dehydrogenase-like protein 94.77
1rjw_A339 ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD 94.76
3ubt_Y 331 Modification methylase HAEIII; protein-DNA complex 94.48
3fbg_A346 Putative arginate lyase; structural genomics, unkn 94.48
4eye_A342 Probable oxidoreductase; structural genomics, niai 94.36
3fwz_A140 Inner membrane protein YBAL; TRKA-N domain, E.coli 94.32
2hcy_A347 Alcohol dehydrogenase 1; tetramer of asymmetric di 94.26
3gms_A340 Putative NADPH:quinone reductase; structural genom 94.25
2j3h_A345 NADP-dependent oxidoreductase P1; double bond redu 94.15
3two_A348 Mannitol dehydrogenase; cinnamyl-alcohol dehydroge 94.12
3qwb_A334 Probable quinone oxidoreductase; rossmann fold, qu 94.11
2zb4_A357 Prostaglandin reductase 2; rossmann fold, alternat 94.08
3jyn_A325 Quinone oxidoreductase; rossmann fold, protein-NAD 93.99
3me5_A 482 Cytosine-specific methyltransferase; structural ge 93.97
4dup_A353 Quinone oxidoreductase; PSI-biology, structural ge 93.91
2vhw_A377 Alanine dehydrogenase; NAD, secreted, oxidoreducta 93.91
1jvb_A347 NAD(H)-dependent alcohol dehydrogenase; archaeon, 93.85
2eih_A343 Alcohol dehydrogenase; zinc ION binding protein, s 93.48
1id1_A153 Putative potassium channel protein; RCK domain, E. 93.2
3gaz_A343 Alcohol dehydrogenase superfamily protein; oxidore 93.14
1yb5_A351 Quinone oxidoreductase; medium-chain dehydrogenase 93.01
3gqv_A371 Enoyl reductase; medium-chain reductase (MDR super 92.84
2eez_A369 Alanine dehydrogenase; TTHA0216, structural genomi 92.68
3goh_A315 Alcohol dehydrogenase, zinc-containing; NP_718042. 92.62
1wly_A333 CAAR, 2-haloacrylate reductase; NADPH-dependent ox 92.52
1boo_A323 Protein (N-4 cytosine-specific methyltransferase P 92.5
1piw_A360 Hypothetical zinc-type alcohol dehydrogenase- like 92.43
2j8z_A354 Quinone oxidoreductase; medium-chain dehydrogenase 92.41
2qrv_A295 DNA (cytosine-5)-methyltransferase 3A; DNA methylt 92.39
2cdc_A366 Glucose dehydrogenase glucose 1-dehydrogenase, DHG 92.38
3swr_A 1002 DNA (cytosine-5)-methyltransferase 1; epigenetics, 92.31
1qor_A327 Quinone oxidoreductase; HET: NAP; 2.20A {Escherich 92.31
1iz0_A302 Quinone oxidoreductase; APO-enzyme, riken structur 92.17
3l9w_A 413 Glutathione-regulated potassium-efflux system Pro 92.14
3nx4_A324 Putative oxidoreductase; csgid, structural genomic 92.09
3ggo_A314 Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b 92.0
3iht_A174 S-adenosyl-L-methionine methyl transferase; YP_165 91.74
3gg2_A 450 Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd 91.69
3dfz_A223 SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase 91.67
2py6_A409 Methyltransferase FKBM; YP_546752.1, structural ge 91.58
1yqd_A366 Sinapyl alcohol dehydrogenase; lignin, monolignol, 91.44
2vz8_A 2512 Fatty acid synthase; transferase, phosphopantethei 91.29
2y0c_A 478 BCEC, UDP-glucose dehydrogenase; oxidoreductase, c 91.06
3c85_A183 Putative glutathione-regulated potassium-efflux S 90.97
3k96_A 356 Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA 90.95
1xa0_A328 Putative NADPH dependent oxidoreductases; structur 90.9
1lss_A140 TRK system potassium uptake protein TRKA homolog; 90.72
2cf5_A357 Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign 90.71
2o3j_A 481 UDP-glucose 6-dehydrogenase; structural genomics, 90.45
3llv_A141 Exopolyphosphatase-related protein; NAD(P)-binding 90.32
4a0s_A447 Octenoyl-COA reductase/carboxylase; oxidoreductase 90.09
4a7p_A 446 UDP-glucose dehydrogenase; oxidoreductase, carbohy 89.97
1l7d_A384 Nicotinamide nucleotide transhydrogenase, subunit 89.86
1zcj_A 463 Peroxisomal bifunctional enzyme; peroxisomal multi 89.73
3d0o_A317 L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly 89.68
3p2y_A381 Alanine dehydrogenase/pyridine nucleotide transhy; 89.66
3pqe_A326 L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas 89.66
3krt_A456 Crotonyl COA reductase; structural genomics, prote 89.56
2g1u_A155 Hypothetical protein TM1088A; structural genomics, 89.23
2aef_A234 Calcium-gated potassium channel MTHK; rossmann fol 89.1
4dio_A405 NAD(P) transhydrogenase subunit alpha PART 1; stru 88.97
1x13_A401 NAD(P) transhydrogenase subunit alpha; NAD(H)-bind 88.85
1tt7_A330 YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st 88.8
1ldn_A316 L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA 88.74
4a27_A349 Synaptic vesicle membrane protein VAT-1 homolog-L; 88.72
1jw9_B249 Molybdopterin biosynthesis MOEB protein; MOEB: mod 88.62
4e12_A283 Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 88.5
2vn8_A375 Reticulon-4-interacting protein 1; mitochondrion, 88.4
3l4b_C218 TRKA K+ channel protien TM1088B; potassium channel 88.16
3h7a_A252 Short chain dehydrogenase; oxidoreductase, PSI-2, 87.74
3grk_A293 Enoyl-(acyl-carrier-protein) reductase (NADH); ssg 87.54
3lyl_A247 3-oxoacyl-(acyl-carrier-protein) reductase; alpha 87.16
1wma_A276 Carbonyl reductase [NADPH] 1; oxidoreductase; HET: 87.15
2q3e_A 467 UDP-glucose 6-dehydrogenase; hexamer, structural g 86.9
3oig_A266 Enoyl-[acyl-carrier-protein] reductase [NADH]; fat 86.88
3sju_A279 Keto reductase; short-chain dehydrogenase, oxidore 86.8
3ado_A319 Lambda-crystallin; L-gulonate 3-dehydrogenase, str 86.67
1eg2_A319 Modification methylase RSRI; rossmann fold, exocyc 86.66
1rjd_A334 PPM1P, carboxy methyl transferase for protein phos 86.65
1f0y_A302 HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive 86.39
3eod_A130 Protein HNR; response regulator, phosphoprotein, t 86.37
1a5z_A319 L-lactate dehydrogenase; oxidoreductase, glycolysi 86.3
3h8v_A292 Ubiquitin-like modifier-activating enzyme 5; rossm 86.2
3o8q_A281 Shikimate 5-dehydrogenase I alpha; structural geno 85.91
1zud_1251 Adenylyltransferase THIF; thiamin, thiazole, prote 85.86
1y6j_A318 L-lactate dehydrogenase; southeast collaboratory f 85.81
2g5c_A281 Prephenate dehydrogenase; TYRA, oxidoreductase; HE 85.78
3av4_A 1330 DNA (cytosine-5)-methyltransferase 1; CXXC-type zi 85.68
3imf_A257 Short chain dehydrogenase; structural genomics, in 85.64
4g65_A461 TRK system potassium uptake protein TRKA; structur 85.58
3tjr_A301 Short chain dehydrogenase; structural genomics, se 85.46
3ijr_A291 Oxidoreductase, short chain dehydrogenase/reducta; 85.45
3tqh_A321 Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella 85.33
3o38_A266 Short chain dehydrogenase; tuberculosis, ortholog 85.2
1lnq_A336 MTHK channels, potassium channel related protein; 84.98
1ez4_A318 Lactate dehydrogenase; rossmann fold, oxidoreducta 84.97
3pxx_A287 Carveol dehydrogenase; structural genomics, seattl 84.89
3vku_A326 L-LDH, L-lactate dehydrogenase; rossmann fold, NAD 84.85
1zkd_A387 DUF185; NESG, RPR58, structural genomics, PSI, pro 84.55
2xxj_A310 L-LDH, L-lactate dehydrogenase; oxidoreductase, hy 84.33
4ft4_B 784 DNA (cytosine-5)-methyltransferase 1; chromodomain 84.32
3v2g_A271 3-oxoacyl-[acyl-carrier-protein] reductase; struct 84.27
3h2s_A224 Putative NADH-flavin reductase; Q03B84, NESG, LCR1 84.26
1mv8_A 436 GMD, GDP-mannose 6-dehydrogenase; rossman fold, do 84.25
2uyo_A310 Hypothetical protein ML2640; putative methyltransf 84.12
4dcm_A 375 Ribosomal RNA large subunit methyltransferase G; 2 83.93
2zqz_A326 L-LDH, L-lactate dehydrogenase; oxidoreductase, ro 83.86
3rkr_A262 Short chain oxidoreductase; rossmann fold; HET: NA 83.62
3r1i_A276 Short-chain type dehydrogenase/reductase; structur 83.59
3ucx_A264 Short chain dehydrogenase; ssgcid, seattle structu 83.58
2i6t_A303 Ubiquitin-conjugating enzyme E2-like isoform A; L- 83.56
2dpo_A319 L-gulonate 3-dehydrogenase; structural genomics, N 83.56
4aj2_A331 L-lactate dehydrogenase A chain; oxidoreductase-in 83.54
2km1_A136 Protein DRE2; yeast, antiapoptotic, protein bindin 83.52
3t4x_A267 Oxidoreductase, short chain dehydrogenase/reducta; 83.43
4e6p_A259 Probable sorbitol dehydrogenase (L-iditol 2-dehyd; 83.17
3ojo_A 431 CAP5O; rossmann fold, complex with cofactor NAD an 83.09
4dkj_A 403 Cytosine-specific methyltransferase; CG-specificit 82.98
3ic5_A118 Putative saccharopine dehydrogenase; structural ge 82.96
2ae2_A260 Protein (tropinone reductase-II); oxidoreductase, 82.94
1zej_A293 HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural 82.7
2rhc_B277 Actinorhodin polyketide ketoreductase; oxidoreduct 82.66
1dlj_A 402 UDP-glucose dehydrogenase; rossmann fold, ternary 82.63
3f1l_A252 Uncharacterized oxidoreductase YCIK; E. coli, NADP 82.62
3hv2_A153 Response regulator/HD domain protein; PSI-2, NYSGX 82.5
3lua_A140 Response regulator receiver protein; two-component 82.03
3tum_A269 Shikimate dehydrogenase family protein; rossmann-f 82.02
4imr_A275 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor 81.86
3tsc_A277 Putative oxidoreductase; structural genomics, seat 81.85
3l77_A235 Short-chain alcohol dehydrogenase; oxidoreductase; 81.83
2v6b_A304 L-LDH, L-lactate dehydrogenase; oxidoreductase, ra 81.82
3ioy_A319 Short-chain dehydrogenase/reductase SDR; structura 81.76
4g65_A 461 TRK system potassium uptake protein TRKA; structur 81.75
3cu5_A141 Two component transcriptional regulator, ARAC FAM; 81.71
3grc_A140 Sensor protein, kinase; protein structure initiati 81.7
3u5t_A267 3-oxoacyl-[acyl-carrier-protein] reductase; struct 81.69
3pi7_A349 NADH oxidoreductase; groes-like fold, NAD(P)-bindi 81.68
3pk0_A262 Short-chain dehydrogenase/reductase SDR; ssgcid, s 81.59
3pid_A 432 UDP-glucose 6-dehydrogenase; rossmann fold, oxidor 81.55
3rui_A340 Ubiquitin-like modifier-activating enzyme ATG7; au 81.48
3pgx_A280 Carveol dehydrogenase; structural genomics, seattl 81.44
4e7p_A150 Response regulator; DNA binding, cytosol, transcri 81.4
3kto_A136 Response regulator receiver protein; PSI-II,struct 81.37
3mog_A 483 Probable 3-hydroxybutyryl-COA dehydrogenase; struc 81.37
4e21_A 358 6-phosphogluconate dehydrogenase (decarboxylating; 81.33
3oj0_A144 Glutr, glutamyl-tRNA reductase; structural genomic 81.32
1ae1_A273 Tropinone reductase-I; oxidoreductase, tropane alk 81.3
3cg0_A140 Response regulator receiver modulated diguanylate 81.25
4fs3_A256 Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; 81.22
3cea_A 346 MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore 80.94
4fc7_A277 Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman 80.86
3ged_A247 Short-chain dehydrogenase/reductase SDR; SCOR, ros 80.8
3b1f_A290 Putative prephenate dehydrogenase; enzyme, 4-hydro 80.79
2zyd_A 480 6-phosphogluconate dehydrogenase, decarboxylating; 80.7
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} Back     alignment and structure
Probab=100.00  E-value=3.1e-65  Score=486.87  Aligned_cols=272  Identities=34%  Similarity=0.645  Sum_probs=245.0

Q ss_pred             cccceeeeeeeEEEeeeCCCceEEEEEecCceeEEEEcCeEeecccchhHHHHHHHhccccCCCCCCEEEEEeCcccHHH
Q 017607           78 PGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVL  157 (369)
Q Consensus        78 ~~~~~~~~~~~~l~~~~s~~q~I~v~~~~~~G~~l~lDg~~q~~~~de~~Y~e~l~~~~l~~~~~p~~VLdIG~G~G~~~  157 (369)
                      ++..++++++++|++++|+||+|.|+++..||++|+|||.+|++++||+.|||||+|+|++.|++|++||+||+|+|+++
T Consensus        19 ~~~~~~~~v~~vl~~~~S~yQ~i~v~~s~~~G~~L~LDg~~q~te~De~~YhE~l~h~~l~~~p~pk~VLIiGgGdG~~~   98 (294)
T 3o4f_A           19 DQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAML   98 (294)
T ss_dssp             SSEEEEEEESEEEEEEC---CCEEEEEETTTEEEEEETTEEEEETTTHHHHHHHHHHHHHHHSSCCCEEEEESCTTSHHH
T ss_pred             CCcceEEEEeeEEEeccCCCceEEEEEcCCcceEEEECCchhhccccHHHHHHHHHHHHHhhCCCCCeEEEECCCchHHH
Confidence            56688899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcC-CCCCCCEEEEEcchHHHHhhCCCCCccEEEEcCCCCCCCcccccc
Q 017607          158 REISRHDSVELIDICEIDKMVIDVSKKYFPELAV-GFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVE  236 (369)
Q Consensus       158 ~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~-~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~p~~~~~~L~~  236 (369)
                      +++++|+++++|++||||++|+++||++|+..+. .+++||++++++||++|++.. .++||+||+|+++|.+++..||+
T Consensus        99 revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~-~~~yDvIi~D~~dp~~~~~~L~t  177 (294)
T 3o4f_A           99 REVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQT-SQTFDVIISDCTDPIGPGESLFT  177 (294)
T ss_dssp             HHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCS-SCCEEEEEESCCCCCCTTCCSSC
T ss_pred             HHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhc-cccCCEEEEeCCCcCCCchhhcC
Confidence            9999999999999999999999999999998755 478999999999999999765 57899999999999999999999


Q ss_pred             HHHHHHHHHhccCCceEEecccccchhhhHHHHHHHHHHHHCCCCeeEEEEEEeeccCCcEEEEEeecCCCCCCCCCCCC
Q 017607          237 KPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPIN  316 (369)
Q Consensus       237 ~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~i~~~l~~~F~~~v~~~~~~vP~~p~g~w~f~~ask~~~~~~~~~p~~  316 (369)
                      .+||+.++++|+|||++++|++++|.+.+.+..+.++++++|+ .|.++++.||+||+|.|||++|||+.++....   .
T Consensus       178 ~eFy~~~~~~L~p~Gv~v~q~~sp~~~~~~~~~~~~~l~~~F~-~v~~~~~~vPty~~g~w~f~~as~~~~~~~~~---~  253 (294)
T 3o4f_A          178 SAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFS-DVGFYQAAIPTYYGGIMTFAWATDNDALRHLS---T  253 (294)
T ss_dssp             CHHHHHHHHTEEEEEEEEEEEEESSSCCHHHHHHHHHHHHHCS-EEEEEEECCTTSSSSCEEEEEEESCTTGGGCC---H
T ss_pred             HHHHHHHHHHhCCCCEEEEecCCcccChHHHHHHHHHHHhhCC-ceeeeeeeeccCCCcceeheeEECCCccccCC---h
Confidence            9999999999999999999999999999999999999999999 78999999999999999999999985543321   1


Q ss_pred             chhhhcccccCCCCCeeeCHHHHHHHhcCCHHHHHHhhc
Q 017607          317 PIEKLEGADKHKRELRFYNSEIHSAAFALPAFLKREVSV  355 (369)
Q Consensus       317 ~~~~~~~~~~~~~~~~yy~~~~h~a~f~lP~~~~~~l~~  355 (369)
                      +.. ..+......+|||||+++|+|||+||+|+|++|+.
T Consensus       254 ~~~-~~~~~~~~~~~~yyn~~~h~aaF~lP~~~~~~l~~  291 (294)
T 3o4f_A          254 EII-QARFLASGLKCRYYNPAIHTAAFALPQYLQDALAS  291 (294)
T ss_dssp             HHH-HHHHHSSCCCCSSCCHHHHHHHTCCCHHHHHHTTS
T ss_pred             HHH-hHHHHhhCCCceEECHHHHHHHccCcHHHHHHHhc
Confidence            111 11222345689999999999999999999999975
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A Back     alignment and structure
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A* Back     alignment and structure
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17 Back     alignment and structure
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A* Back     alignment and structure
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17 Back     alignment and structure
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A* Back     alignment and structure
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A* Back     alignment and structure
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A* Back     alignment and structure
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A* Back     alignment and structure
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A* Back     alignment and structure
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A Back     alignment and structure
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A* Back     alignment and structure
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032} Back     alignment and structure
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A* Back     alignment and structure
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A* Back     alignment and structure
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp} Back     alignment and structure
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum} Back     alignment and structure
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A* Back     alignment and structure
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A* Back     alignment and structure
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis} Back     alignment and structure
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus} Back     alignment and structure
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53 Back     alignment and structure
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53 Back     alignment and structure
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca} Back     alignment and structure
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum} Back     alignment and structure
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp} Back     alignment and structure
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A* Back     alignment and structure
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0 Back     alignment and structure
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str} Back     alignment and structure
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4 Back     alignment and structure
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1 Back     alignment and structure
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens} Back     alignment and structure
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A* Back     alignment and structure
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A* Back     alignment and structure
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP} Back     alignment and structure
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ... Back     alignment and structure
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans} Back     alignment and structure
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A* Back     alignment and structure
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes} Back     alignment and structure
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0 Back     alignment and structure
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans} Back     alignment and structure
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A* Back     alignment and structure
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae} Back     alignment and structure
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20 Back     alignment and structure
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E Back     alignment and structure
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46 Back     alignment and structure
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A* Back     alignment and structure
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A* Back     alignment and structure
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51 Back     alignment and structure
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus} Back     alignment and structure
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46 Back     alignment and structure
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis} Back     alignment and structure
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46 Back     alignment and structure
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans} Back     alignment and structure
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405} Back     alignment and structure
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp} Back     alignment and structure
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A* Back     alignment and structure
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A* Back     alignment and structure
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus} Back     alignment and structure
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A* Back     alignment and structure
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46 Back     alignment and structure
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A* Back     alignment and structure
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46 Back     alignment and structure
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei} Back     alignment and structure
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C* Back     alignment and structure
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A* Back     alignment and structure
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A Back     alignment and structure
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A* Back     alignment and structure
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii} Back     alignment and structure
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A Back     alignment and structure
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43 Back     alignment and structure
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli} Back     alignment and structure
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3 Back     alignment and structure
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20 Back     alignment and structure
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A* Back     alignment and structure
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp} Back     alignment and structure
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei} Back     alignment and structure
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41 Back     alignment and structure
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A* Back     alignment and structure
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A Back     alignment and structure
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus} Back     alignment and structure
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei} Back     alignment and structure
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A* Back     alignment and structure
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens} Back     alignment and structure
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str} Back     alignment and structure
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli} Back     alignment and structure
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13 Back     alignment and structure
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36 Back     alignment and structure
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli} Back     alignment and structure
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42 Back     alignment and structure
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13 Back     alignment and structure
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21 Back     alignment and structure
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae} Back     alignment and structure
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus} Back     alignment and structure
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris} Back     alignment and structure
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes} Back     alignment and structure
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus} Back     alignment and structure
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii} Back     alignment and structure
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A* Back     alignment and structure
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A* Back     alignment and structure
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A* Back     alignment and structure
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A Back     alignment and structure
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A Back     alignment and structure
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A Back     alignment and structure
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian} Back     alignment and structure
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A* Back     alignment and structure
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis} Back     alignment and structure
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A* Back     alignment and structure
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032} Back     alignment and structure
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus} Back     alignment and structure
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13 Back     alignment and structure
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A* Back     alignment and structure
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51 Back     alignment and structure
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A Back     alignment and structure
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A* Back     alignment and structure
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus} Back     alignment and structure
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana} Back     alignment and structure
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A* Back     alignment and structure
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440} Back     alignment and structure
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A* Back     alignment and structure
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus} Back     alignment and structure
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis} Back     alignment and structure
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15} Back     alignment and structure
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus} Back     alignment and structure
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens} Back     alignment and structure
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str} Back     alignment and structure
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A Back     alignment and structure
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti} Back     alignment and structure
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum} Back     alignment and structure
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A* Back     alignment and structure
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12} Back     alignment and structure
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae} Back     alignment and structure
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18 Back     alignment and structure
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix} Back     alignment and structure
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42 Back     alignment and structure
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A Back     alignment and structure
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638} Back     alignment and structure
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A* Back     alignment and structure
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032} Back     alignment and structure
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413} Back     alignment and structure
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A* Back     alignment and structure
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A* Back     alignment and structure
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens} Back     alignment and structure
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A* Back     alignment and structure
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus} Back     alignment and structure
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13 Back     alignment and structure
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A* Back     alignment and structure
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A* Back     alignment and structure
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43 Back     alignment and structure
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana} Back     alignment and structure
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A* Back     alignment and structure
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A* Back     alignment and structure
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli} Back     alignment and structure
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A* Back     alignment and structure
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A Back     alignment and structure
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413} Back     alignment and structure
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1 Back     alignment and structure
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A* Back     alignment and structure
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii} Back     alignment and structure
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str} Back     alignment and structure
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A* Back     alignment and structure
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43 Back     alignment and structure
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0 Back     alignment and structure
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli} Back     alignment and structure
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae} Back     alignment and structure
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca} Back     alignment and structure
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A Back     alignment and structure
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54 Back     alignment and structure
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum} Back     alignment and structure
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7 Back     alignment and structure
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans} Back     alignment and structure
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli} Back     alignment and structure
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38 Back     alignment and structure
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae} Back     alignment and structure
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7 Back     alignment and structure
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E* Back     alignment and structure
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32 Back     alignment and structure
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A* Back     alignment and structure
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A* Back     alignment and structure
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A* Back     alignment and structure
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41 Back     alignment and structure
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A* Back     alignment and structure
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A* Back     alignment and structure
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus} Back     alignment and structure
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus} Back     alignment and structure
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A* Back     alignment and structure
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6 Back     alignment and structure
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32 Back     alignment and structure
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum} Back     alignment and structure
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A Back     alignment and structure
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi} Back     alignment and structure
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens} Back     alignment and structure
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A* Back     alignment and structure
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus} Back     alignment and structure
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413} Back     alignment and structure
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides} Back     alignment and structure
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei} Back     alignment and structure
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A* Back     alignment and structure
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33 Back     alignment and structure
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A* Back     alignment and structure
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A* Back     alignment and structure
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP} Back     alignment and structure
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31 Back     alignment and structure
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium} Back     alignment and structure
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A* Back     alignment and structure
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15 Back     alignment and structure
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A* Back     alignment and structure
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae} Back     alignment and structure
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens} Back     alignment and structure
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii} Back     alignment and structure
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa} Back     alignment and structure
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A* Back     alignment and structure
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis} Back     alignment and structure
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A* Back     alignment and structure
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus} Back     alignment and structure
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A Back     alignment and structure
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli} Back     alignment and structure
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli} Back     alignment and structure
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme} Back     alignment and structure
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A* Back     alignment and structure
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45 Back     alignment and structure
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A* Back     alignment and structure
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ... Back     alignment and structure
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A* Back     alignment and structure
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus} Back     alignment and structure
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A* Back     alignment and structure
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana} Back     alignment and structure
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp} Back     alignment and structure
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A* Back     alignment and structure
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A* Back     alignment and structure
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus} Back     alignment and structure
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41 Back     alignment and structure
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A* Back     alignment and structure
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A* Back     alignment and structure
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A* Back     alignment and structure
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3} Back     alignment and structure
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A* Back     alignment and structure
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A* Back     alignment and structure
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora} Back     alignment and structure
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A* Back     alignment and structure
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A* Back     alignment and structure
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24 Back     alignment and structure
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A* Back     alignment and structure
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A* Back     alignment and structure
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile} Back     alignment and structure
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A* Back     alignment and structure
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A* Back     alignment and structure
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A* Back     alignment and structure
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A* Back     alignment and structure
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str} Back     alignment and structure
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans} Back     alignment and structure
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A* Back     alignment and structure
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens} Back     alignment and structure
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* Back     alignment and structure
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A* Back     alignment and structure
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A* Back     alignment and structure
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38 Back     alignment and structure
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A* Back     alignment and structure
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis} Back     alignment and structure
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae} Back     alignment and structure
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45 Back     alignment and structure
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum} Back     alignment and structure
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0 Back     alignment and structure
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A* Back     alignment and structure
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A* Back     alignment and structure
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus} Back     alignment and structure
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24 Back     alignment and structure
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A Back     alignment and structure
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A* Back     alignment and structure
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A Back     alignment and structure
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A Back     alignment and structure
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei} Back     alignment and structure
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A* Back     alignment and structure
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B* Back     alignment and structure
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus} Back     alignment and structure
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B* Back     alignment and structure
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus} Back     alignment and structure
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A* Back     alignment and structure
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59 Back     alignment and structure
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei} Back     alignment and structure
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A Back     alignment and structure
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus} Back     alignment and structure
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A* Back     alignment and structure
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A Back     alignment and structure
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23 Back     alignment and structure
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A* Back     alignment and structure
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A* Back     alignment and structure
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A* Back     alignment and structure
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A* Back     alignment and structure
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus} Back     alignment and structure
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A* Back     alignment and structure
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A* Back     alignment and structure
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus} Back     alignment and structure
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24 Back     alignment and structure
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus} Back     alignment and structure
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli} Back     alignment and structure
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A* Back     alignment and structure
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A* Back     alignment and structure
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana} Back     alignment and structure
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A Back     alignment and structure
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26 Back     alignment and structure
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str} Back     alignment and structure
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35 Back     alignment and structure
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 Back     alignment and structure
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Back     alignment and structure
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Back     alignment and structure
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Back     alignment and structure
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157} Back     alignment and structure
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Back     alignment and structure
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Back     alignment and structure
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ... Back     alignment and structure
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11 Back     alignment and structure
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana} Back     alignment and structure
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} Back     alignment and structure
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A Back     alignment and structure
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda} Back     alignment and structure
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 Back     alignment and structure
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... Back     alignment and structure
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11 Back     alignment and structure
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A* Back     alignment and structure
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* Back     alignment and structure
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* Back     alignment and structure
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Back     alignment and structure
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* Back     alignment and structure
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A Back     alignment and structure
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Back     alignment and structure
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica} Back     alignment and structure
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11 Back     alignment and structure
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 Back     alignment and structure
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Back     alignment and structure
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Back     alignment and structure
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Back     alignment and structure
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Back     alignment and structure
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 Back     alignment and structure
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Back     alignment and structure
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Back     alignment and structure
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* Back     alignment and structure
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Back     alignment and structure
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Back     alignment and structure
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* Back     alignment and structure
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A Back     alignment and structure
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Back     alignment and structure
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Back     alignment and structure
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Back     alignment and structure
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Back     alignment and structure
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A* Back     alignment and structure
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Back     alignment and structure
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Back     alignment and structure
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} Back     alignment and structure
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Back     alignment and structure
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Back     alignment and structure
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* Back     alignment and structure
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} Back     alignment and structure
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Back     alignment and structure
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* Back     alignment and structure
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Back     alignment and structure
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A Back     alignment and structure
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Back     alignment and structure
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* Back     alignment and structure
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Back     alignment and structure
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Back     alignment and structure
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 Back     alignment and structure
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Back     alignment and structure
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Back     alignment and structure
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Back     alignment and structure
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} Back     alignment and structure
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Back     alignment and structure
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Back     alignment and structure
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11 Back     alignment and structure
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A Back     alignment and structure
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Back     alignment and structure
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens} Back     alignment and structure
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Back     alignment and structure
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A* Back     alignment and structure
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Back     alignment and structure
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Back     alignment and structure
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* Back     alignment and structure
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* Back     alignment and structure
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A* Back     alignment and structure
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3} Back     alignment and structure
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis} Back     alignment and structure
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium} Back     alignment and structure
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56 Back     alignment and structure
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* Back     alignment and structure
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Back     alignment and structure
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A* Back     alignment and structure
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} Back     alignment and structure
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii} Back     alignment and structure
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 Back     alignment and structure
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 Back     alignment and structure
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* Back     alignment and structure
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans} Back     alignment and structure
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} Back     alignment and structure
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Back     alignment and structure
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea} Back     alignment and structure
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* Back     alignment and structure
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus} Back     alignment and structure
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A* Back     alignment and structure
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} Back     alignment and structure
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* Back     alignment and structure
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Back     alignment and structure
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* Back     alignment and structure
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A Back     alignment and structure
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} Back     alignment and structure
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A* Back     alignment and structure
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* Back     alignment and structure
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A* Back     alignment and structure
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Back     alignment and structure
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* Back     alignment and structure
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* Back     alignment and structure
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Back     alignment and structure
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} Back     alignment and structure
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Back     alignment and structure
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* Back     alignment and structure
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 Back     alignment and structure
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Back     alignment and structure
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A Back     alignment and structure
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* Back     alignment and structure
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Back     alignment and structure
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A* Back     alignment and structure
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A Back     alignment and structure
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A Back     alignment and structure
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A* Back     alignment and structure
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12} Back     alignment and structure
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1 Back     alignment and structure
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A* Back     alignment and structure
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* Back     alignment and structure
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A Back     alignment and structure
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1 Back     alignment and structure
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6 Back     alignment and structure
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A* Back     alignment and structure
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Back     alignment and structure
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} Back     alignment and structure
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Back     alignment and structure
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Back     alignment and structure
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Back     alignment and structure
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Back     alignment and structure
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A Back     alignment and structure
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1 Back     alignment and structure
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 Back     alignment and structure
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A* Back     alignment and structure
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52 Back     alignment and structure
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A Back     alignment and structure
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A* Back     alignment and structure
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Back     alignment and structure
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Back     alignment and structure
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A* Back     alignment and structure
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A* Back     alignment and structure
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli} Back     alignment and structure
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A* Back     alignment and structure
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Back     alignment and structure
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Back     alignment and structure
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 Back     alignment and structure
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A Back     alignment and structure
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ... Back     alignment and structure
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae} Back     alignment and structure
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Back     alignment and structure
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Back     alignment and structure
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A* Back     alignment and structure
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans} Back     alignment and structure
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} Back     alignment and structure
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Back     alignment and structure
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus} Back     alignment and structure
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Back     alignment and structure
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A* Back     alignment and structure
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Back     alignment and structure
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5} Back     alignment and structure
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum} Back     alignment and structure
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} Back     alignment and structure
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 Back     alignment and structure
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* Back     alignment and structure
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans} Back     alignment and structure
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Back     alignment and structure
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} Back     alignment and structure
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg} Back     alignment and structure
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP} Back     alignment and structure
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Back     alignment and structure
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Back     alignment and structure
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 Back     alignment and structure
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A* Back     alignment and structure
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A* Back     alignment and structure
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 Back     alignment and structure
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A Back     alignment and structure
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0 Back     alignment and structure
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli} Back     alignment and structure
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} Back     alignment and structure
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} Back     alignment and structure
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Back     alignment and structure
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp} Back     alignment and structure
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A Back     alignment and structure
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1} Back     alignment and structure
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Back     alignment and structure
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* Back     alignment and structure
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A Back     alignment and structure
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 369
d1xj5a_290 c.66.1.17 (A:) Spermidine synthase {Thale cress (A 1e-109
d2b2ca1312 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhab 1e-107
d2o07a1285 c.66.1.17 (A:16-300) Spermidine synthase {Human (H 7e-96
d1inla_295 c.66.1.17 (A:) Spermidine synthase {Thermotoga mar 8e-92
d1uira_312 c.66.1.17 (A:) Spermidine synthase {Thermus thermo 2e-87
d1iy9a_274 c.66.1.17 (A:) Spermidine synthase {Bacillus subti 6e-87
d1mjfa_276 c.66.1.17 (A:) Putative spermidine synthetase PF01 2e-80
d2b25a1324 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 2e-06
d1xvaa_292 c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Ra 2e-04
d1zx0a1229 c.66.1.16 (A:8-236) Guanidinoacetate methyltransfe 4e-04
d1nw3a_328 c.66.1.31 (A:) Catalytic, N-terminal domain of his 8e-04
d1booa_ 320 c.66.1.11 (A:) m.PvuII N4 cytosine-specific DNA me 0.001
d1i9ga_264 c.66.1.13 (A:) Probable methyltransferase Rv2118c 0.002
>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 290 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  319 bits (818), Expect = e-109
 Identities = 201/305 (65%), Positives = 252/305 (82%), Gaps = 16/305 (5%)

Query: 49  STVVSGWFSESQSTSDKTGKTMYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAY 108
           STV+ GWFSE               +PMWPGEAHSLKV+++LF+GKS+YQ+V+VF+S  Y
Sbjct: 1   STVIPGWFSE--------------MSPMWPGEAHSLKVEKVLFQGKSDYQDVIVFQSATY 46

Query: 109 GKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVEL 168
           GKVLVLDG++QLTE+DECAYQEMI HLPLCSIP+PK VLV+GGGDGGVLRE++RH S+E 
Sbjct: 47  GKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVARHASIEQ 106

Query: 169 IDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPV 228
           ID+CEIDKMV+DVSK++FP++A+G+EDPRV L IGD V FL+    G YDA+IVDSSDP+
Sbjct: 107 IDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVIVDSSDPI 166

Query: 229 GPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKGSVHYAWAS 288
           GPA+EL EKPFF ++A+ALRPGGV+C  AES+WLH  +IED++S CRE FKGSV+YAW S
Sbjct: 167 GPAKELFEKPFFQSVARALRPGGVVCTQAESLWLHMDIIEDIVSNCREIFKGSVNYAWTS 226

Query: 289 VPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAF 348
           VPTYPSG+IGF++CSTEGP VDF +P+NPI+  E + K    L+FYN+EIHSAAF LP+F
Sbjct: 227 VPTYPSGVIGFMLCSTEGPDVDFKHPLNPID--ESSSKSNGPLKFYNAEIHSAAFCLPSF 284

Query: 349 LKREV 353
            K+ +
Sbjct: 285 AKKVI 289
>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]} Length = 312 Back     information, alignment and structure
>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 Back     information, alignment and structure
>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]} Length = 295 Back     information, alignment and structure
>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]} Length = 312 Back     information, alignment and structure
>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]} Length = 274 Back     information, alignment and structure
>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 276 Back     information, alignment and structure
>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]} Length = 324 Back     information, alignment and structure
>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 292 Back     information, alignment and structure
>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]} Length = 229 Back     information, alignment and structure
>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]} Length = 328 Back     information, alignment and structure
>d1booa_ c.66.1.11 (A:) m.PvuII N4 cytosine-specific DNA methyltransferase {Proteus vulgaris [TaxId: 585]} Length = 320 Back     information, alignment and structure
>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]} Length = 264 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query369
d1xj5a_290 Spermidine synthase {Thale cress (Arabidopsis thal 100.0
d2b2ca1312 Spermidine synthase {Caenorhabditis elegans [TaxId 100.0
d2o07a1285 Spermidine synthase {Human (Homo sapiens) [TaxId: 100.0
d1inla_295 Spermidine synthase {Thermotoga maritima [TaxId: 2 100.0
d1iy9a_274 Spermidine synthase {Bacillus subtilis [TaxId: 142 100.0
d1uira_312 Spermidine synthase {Thermus thermophilus [TaxId: 100.0
d1mjfa_276 Putative spermidine synthetase PF0127 (SpeE) {Arch 100.0
d2b3ta1274 N5-glutamine methyltransferase, HemK {Escherichia 99.62
d1zx0a1229 Guanidinoacetate methyltransferase {Human (Homo sa 99.61
d2fcaa1204 tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil 99.56
d1dusa_194 Hypothetical protein MJ0882 {Archaeon Methanococcu 99.53
d1yzha1204 tRNA (guanine-N(7)-)-methyltransferase TrmB {Strep 99.51
d1vl5a_231 Hypothetical protein BH2331 {Bacillus halodurans [ 99.5
d1y8ca_246 Putative methyltransferase CAC2371 {Clostridium ac 99.49
d1xxla_234 Hypothetical protein YcgJ {Bacillus subtilis [TaxI 99.48
d1l3ia_186 Precorrin-6Y methyltransferase (CbiT) {Archaeon Me 99.47
d1wzna1251 Hypothetical methyltransferase PH1305 {Archaeon Py 99.47
d1ve3a1226 Hypothetical protein PH0226 {Archaeon Pyrococcus h 99.46
d1nkva_245 Hypothetical Protein YjhP {Escherichia coli [TaxId 99.45
d1im8a_225 Hypothetical protein HI0319 (YecO) {Haemophilus in 99.45
d1yb2a1250 Hypothetical protein Ta0852 {Thermoplasma acidophi 99.42
d1i9ga_264 Probable methyltransferase Rv2118c {Mycobacterium 99.42
d2nxca1254 PrmA-like protein TTHA0656 (TT0836) {Thermus therm 99.42
d2o57a1282 Putative sarcosine dimethylglycine methyltransfera 99.42
d1xtpa_254 Hypothetical protein Lmaj004091aaa (LmjF30.0810) { 99.41
d1nv8a_271 N5-glutamine methyltransferase, HemK {Thermotoga m 99.4
d2ex4a1222 Adrenal gland protein AD-003 (C9orf32) {Human (Hom 99.39
d2fk8a1280 Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri 99.37
d2b78a2317 Hypothetical protein SMu776, middle and C-terminal 99.37
d1ri5a_252 mRNA cap (Guanine N-7) methyltransferase {Fungus ( 99.37
d2as0a2324 Hypothetical protein PH1915, middle and C-terminal 99.37
d2i6ga1198 Putative methyltransferase TehB {Salmonella typhim 99.36
d2avda1219 COMT domain-containing protein 1, COMTD1 {Human (H 99.35
d2b25a1324 Hypothetical protein FLJ20628 {Human (Homo sapiens 99.35
d1p91a_268 rRNA methyltransferase RlmA {Escherichia coli [Tax 99.34
d2esra1152 Putative methyltransferase SPy1538 {Streptococcus 99.34
d1wxxa2318 Hypothetical protein TTHA1280, middle and C-termin 99.34
d2avna1246 Hypothetical methyltransferase TM1389 {Thermotoga 99.33
d2igta1309 Putative methyltransferase Atu0340 {Agrobacterium 99.31
d1kpia_291 CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]} 99.31
d1o54a_266 Hypothetical protein TM0748 {Thermotoga maritima [ 99.31
d2gh1a1281 Methyltransferase BC2162 {Bacillus cereus [TaxId: 99.31
d1dl5a1213 Protein-L-isoaspartyl O-methyltransferase {Thermot 99.28
d1susa1227 Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag 99.28
d1nt2a_209 Fibrillarin homologue {Archaeon Archaeoglobus fulg 99.28
d1pjza_201 Thiopurine S-methyltransferase {Pseudomonas syring 99.28
d1kpga_285 CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]} 99.28
d2p7ia1225 Hypothetical protein ECA1738 {Erwinia carotovora [ 99.28
d1tw3a2253 Carminomycin 4-O-methyltransferase {Streptomyces p 99.27
d1i1na_224 Protein-L-isoaspartyl O-methyltransferase {Human ( 99.25
d1vbfa_224 Protein-L-isoaspartyl O-methyltransferase {Sulfolo 99.25
d1g8sa_230 Fibrillarin homologue {Archaeon Methanococcus jann 99.22
d2frna1260 Hypothetical protein PH0793 {Pyrococcus horikoshii 99.21
d2fpoa1183 Methylase YhhF {Escherichia coli [TaxId: 562]} 99.19
d2bzga1229 Thiopurine S-methyltransferase {Human (Homo sapien 99.18
d2fhpa1182 Putative methylase EF2452 {Enterococcus faecalis [ 99.18
d1xvaa_292 Glycine N-methyltransferase {Rat (Rattus norvegicu 99.17
d1qzza2256 Aclacinomycin-10-hydroxylase RdmB {Streptomyces pu 99.16
d1ws6a1171 Methyltransferase TTHA0928 {Thermus thermophilus [ 99.16
d1g8aa_227 Fibrillarin homologue {Archaeon Pyrococcus horikos 99.15
d2cl5a1214 Catechol O-methyltransferase, COMT {Rat (Rattus no 99.13
d1jg1a_215 Protein-L-isoaspartyl O-methyltransferase {Archaeo 99.11
d1vlma_208 Possible histamine N-methyltransferase TM1293 {The 99.1
d1g6q1_328 Arginine methyltransferase, HMT1 {Baker's yeast (S 99.08
d2fyta1311 Protein arginine N-methyltransferase 3, PRMT3 {Hum 99.08
d1r18a_223 Protein-L-isoaspartyl O-methyltransferase {Fruit f 99.07
d1jqea_280 Histamine methyltransferase {Human (Homo sapiens) 99.05
d1ne2a_197 Hypothetical protein Ta1320 {Archaeon Thermoplasma 99.05
d1wy7a1201 Hypothetical protein PH1948 {Archaeon Pyrococcus h 99.04
d1oria_316 Protein arginine N-methyltransferase 1, PRMT1 {Rat 99.04
d2h00a1250 Methyltransferase 10 domain containing protein MET 99.02
d1nw3a_328 Catalytic, N-terminal domain of histone methyltran 99.0
d1m6ya2192 TM0872, methyltransferase domain {Thermotoga marit 98.97
d2ifta1183 Putative methylase HI0767 {Haemophilus influenzae 98.89
d2a14a1257 Indolethylamine N-methyltransferase, INMT {Human ( 98.86
d1u2za_406 Catalytic, N-terminal domain of histone methyltran 98.77
d2g72a1263 Phenylethanolamine N-methyltransferase, PNMTase {H 98.7
d2dula1 375 N(2),N(2)-dimethylguanosine tRNA methyltransferase 98.6
d2f8la1328 Hypothetical protein Lmo1582 {Listeria monocytogen 98.6
d1qama_235 rRNA adenine dimethylase {Bacillus subtilis, Ermc' 98.55
d1fp1d2244 Chalcone O-methyltransferase {Alfalfa (Medicago sa 98.43
d2ih2a1223 DNA methylase TaqI, N-terminal domain {Thermus aqu 98.41
d2bm8a1232 Cephalosporin hydroxylase CmcI {Streptomyces clavu 98.37
d1fp2a2244 Isoflavone O-methyltransferase {Alfalfa (Medicago 98.33
d1uwva2358 rRNA (Uracil-5-)-methyltransferase RumA, catalytic 98.29
d1yuba_245 rRNA adenine dimethylase {Streptococcus pneumoniae 98.23
d1kyza2243 Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltra 98.16
d1jsxa_207 Glucose-inhibited division protein B (GidB) {Esche 98.15
d1ej0a_180 RNA methyltransferase FtsJ {Escherichia coli [TaxI 98.1
d1sqga2284 Ribosomal RNA small subunit methyltransferase B, R 98.04
d1xdza_239 Glucose-inhibited division protein B (GidB) {Bacil 98.02
d1zq9a1278 Probable dimethyladenosine transferase {Human (Hom 98.0
d1wg8a2182 TM0872, methyltransferase domain {Thermus thermoph 97.99
d1af7a2193 Chemotaxis receptor methyltransferase CheR, C-term 97.98
d1qyra_252 High level kasugamycin resistance protein KsgA {Es 97.98
d1ixka_313 Hypothetical methyltransferase PH1374 {Archaeon Py 97.95
d2oyra1250 Hypothetical protein YhiQ {Shigella flexneri [TaxI 97.89
d2okca1425 Type I restriction enzyme StySJI M protein {Bacter 97.86
d2b9ea1293 NOL1R {Human (Homo sapiens) [TaxId: 9606]} 97.8
d2p41a1257 An RNA cap (nucleoside-2'-O-)-methyltransferase do 97.68
d1i4wa_322 Transcription factor sc-mtTFB {Baker's yeast (Sacc 97.43
d1jqba2174 Bacterial secondary alcohol dehydrogenase {Clostri 97.39
d1vj0a2182 Hypothetical protein TM0436 {Thermotoga maritima [ 97.3
d1e3ja2170 Ketose reductase (sorbitol dehydrogenase) {Silverl 97.27
d1f8fa2174 Benzyl alcohol dehydrogenase {Acinetobacter calcoa 97.23
d1pjca1168 L-alanine dehydrogenase {Phormidium lapideum [TaxI 97.18
d2ar0a1 524 M.EcoKI {Escherichia coli [TaxId: 562]} 97.15
d1pl8a2171 Ketose reductase (sorbitol dehydrogenase) {Human ( 96.99
d1kola2195 Formaldehyde dehydrogenase {Pseudomonas putida [Ta 96.97
d1h2ba2172 Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ 96.96
d1piwa2168 Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas 96.92
d1e3ia2174 Alcohol dehydrogenase {Mouse (Mus musculus), class 96.83
d1llua2166 Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax 96.65
d1jvba2170 Alcohol dehydrogenase {Archaeon Sulfolobus solfata 96.5
d1vj1a2187 Putative zinc-binding alcohol dehydrogenase {Mouse 96.28
d1yb5a2174 Quinone oxidoreductase {Human (Homo sapiens) [TaxI 96.28
d1p0fa2174 Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 96.27
d1d1ta2176 Alcohol dehydrogenase {Human (Homo sapiens), diffe 96.15
d2g5ca2171 Prephenate dehydrogenase TyrA {Aquifex aeolicus [T 95.82
d2fzwa2176 Alcohol dehydrogenase {Human (Homo sapiens), diffe 95.78
d2jhfa2176 Alcohol dehydrogenase {Horse (Equus caballus) [Tax 95.74
d1l7da1183 Nicotinamide nucleotide transhydrogenase dI compon 95.62
d1g60a_256 Methyltransferase mboII {Moraxella bovis [TaxId: 4 95.61
d1rjwa2168 Alcohol dehydrogenase {Bacillus stearothermophilus 95.54
d1uufa2168 Hypothetical protein YahK {Escherichia coli [TaxId 95.42
d1eg2a_279 m.RsrI N6 adenosine-specific DNA methyltransferase 95.37
d1pqwa_183 Putative enoyl reductase domain of polyketide synt 95.32
d1booa_ 320 m.PvuII N4 cytosine-specific DNA methyltransferase 95.23
d1pjqa1113 Siroheme synthase CysG, domain 1 {Salmonella typhi 95.2
d2fy8a1129 Potassium channel-related protein MthK {Archaeon M 95.18
d1lssa_132 Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax 95.02
d2oo3a1271 Uncharacterized protein LPG1296 {Legionella pneumo 94.93
d1kyqa1150 Bifunctional dehydrogenase/ferrochelatase Met8p, N 94.91
d1qora2179 Quinone oxidoreductase {Escherichia coli [TaxId: 5 94.87
d1cdoa2175 Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI 94.81
d1iz0a2171 Quinone oxidoreductase {Thermus thermophilus [TaxI 94.74
d2f1ka2165 Prephenate dehydrogenase TyrA {Synechocystis sp. p 94.46
d1dcta_324 DNA methylase HaeIII {Haemophilus aegyptius [TaxId 94.37
d1xa0a2176 B. subtilis YhfP homologue {Bacillus stearothermop 94.26
d1bg6a2184 N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A 93.84
d1g55a_ 343 DNMT2 {Human (Homo sapiens) [TaxId: 9606]} 93.69
d1v3va2182 Leukotriene b4 12-hydroxydehydrogenase/prostagland 93.34
d1ldna1148 Lactate dehydrogenase {Bacillus stearothermophilus 92.96
d1booa_320 m.PvuII N4 cytosine-specific DNA methyltransferase 92.62
d2hmva1134 Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} 92.51
d1g60a_256 Methyltransferase mboII {Moraxella bovis [TaxId: 4 91.86
d1ae1a_258 Tropinone reductase {Jimsonweed (Datura stramonium 91.63
d1ez4a1146 Lactate dehydrogenase {Lactobacillus pentosus [Tax 91.55
d1u8xx1167 Maltose-6'-phosphate glucosidase GlvA {Bacillus su 91.38
d1n1ea2189 Glycerol-3- phosphate dehydrogenase {Trypanosome ( 91.12
d1eg2a_279 m.RsrI N6 adenosine-specific DNA methyltransferase 91.0
d2c7pa1327 DNA methylase HhaI {Haemophilus haemolyticus [TaxI 90.92
d1pr9a_244 Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 90.64
d1id1a_153 Rck domain from putative potassium channel Kch {Es 90.24
d2ae2a_259 Tropinone reductase {Jimsonweed (Datura stramonium 90.17
d1zema1260 Xylitol dehydrogenase {Gluconobacter oxydans [TaxI 89.72
d1pzga1154 Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 89.6
d1gega_255 meso-2,3-butanediol dehydrogenase {Klebsiella pneu 88.79
d1o89a2177 Hypothetical protein YhdH {Escherichia coli [TaxId 88.7
d1mv8a2202 GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos 88.66
d1hdca_254 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre 88.52
d1llda1143 Lactate dehydrogenase {Bifidobacterium longum, str 88.51
d2c07a1251 beta-keto acyl carrier protein reductase {Malaria 88.32
d1yb1a_244 17-beta-hydroxysteroid dehydrogenase type XI {Huma 87.99
d1tt7a2167 Hypothetical protein YhfP {Bacillus subtilis [TaxI 87.99
d1hyha1146 L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La 87.94
d1dz3a_123 Sporulation response regulator Spo0A {Bacillus ste 87.73
d1u0sy_118 CheY protein {Thermotoga maritima [TaxId: 2336]} 87.69
d1ydwa1184 Probable oxidoreductase At4g09670 {Thale cress (Ar 87.68
d1peya_119 Sporulation response regulator Spo0F {Bacillus sub 87.65
d1o9ga_249 rRNA methyltransferase AviRa {Streptomyces viridoc 87.53
d1xhla_274 Hypothetical protein F25D1.5 {Caenorhabditis elega 87.36
d1guza1142 Malate dehydrogenase {Chlorobium vibrioforme [TaxI 87.05
d2iida1 370 L-aminoacid oxidase {Malayan pit viper (Calloselas 86.99
d1vl8a_251 Gluconate 5-dehydrogenase {Thermotoga maritima [Ta 86.9
d1zesa1121 PhoB receiver domain {Escherichia coli [TaxId: 562 86.87
d1qkka_140 Transcriptional regulatory protein DctD, receiver 86.63
d1a5za1140 Lactate dehydrogenase {Thermotoga maritima [TaxId: 86.59
d1k2wa_256 Sorbitol dehydrogenase {Rhodobacter sphaeroides [T 86.48
d1nffa_244 Putative oxidoreductase Rv2002 {Mycobacterium tube 86.36
d1ojua1142 Malate dehydrogenase {Archaeon Archaeoglobus fulgi 86.29
d1kgsa2122 PhoB receiver domain {Thermotoga maritima [TaxId: 86.23
d1dbwa_123 Transcriptional regulatory protein FixJ, receiver 86.13
d1xq1a_259 Tropinone reductase {Thale cress (Arabidopsis thal 86.02
d1xg5a_257 Putative dehydrogenase ARPG836 (MGC4172) {Human (H 85.82
d1yioa2128 Response regulatory protein StyR, N-terminal domai 85.7
d1vi2a1182 Putative shikimate dehydrogenase YdiB {Escherichia 85.67
d1ydea1250 Retinal dehydrogenase/reductase 3 {Human (Homo sap 85.55
d1cyda_242 Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 85.55
d1iy8a_258 Levodione reductase {Corynebacterium aquaticum [Ta 85.49
d1zkda1365 Hypothetical protein RPA4359 {Rhodopseudomonas pal 85.4
d1i0za1160 Lactate dehydrogenase {Human (Homo sapiens), heart 85.36
d1obba1171 Alpha-glucosidase AglA {Thermotoga maritima [TaxId 85.27
d1gu7a2189 2,4-dienoyl-CoA reductase {Yeast (Candida tropical 84.99
d1krwa_123 NTRC receiver domain {Salmonella typhimurium [TaxI 84.98
d1mvoa_121 PhoP receiver domain {Bacillus subtilis [TaxId: 14 84.85
d2rhca1257 beta-keto acyl carrier protein reductase {Streptom 84.74
d1npya1167 Shikimate 5-dehydrogenase-like protein HI0607 {Hae 84.53
d2pl1a1119 PhoP receiver domain {Escherichia coli [TaxId: 562 84.35
d1g0oa_272 1,3,8-trihydroxynaphtalene reductase (THNR, naphto 83.83
d1p77a1171 Shikimate 5-dehydrogenase AroE {Haemophilus influe 83.8
d1a04a2138 Nitrate/nitrite response regulator (NarL), receive 83.72
d1onfa2117 Glutathione reductase {Plasmodium falciparum [TaxI 83.63
d1w6ua_294 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H 83.54
d1ys7a2121 Transcriptional regulatory protein PrrA, N-termina 83.39
d1q7ba_243 beta-keto acyl carrier protein reductase {Escheric 82.83
d1wmaa1275 Carbonyl reductase/20beta-hydroxysteroid dehydroge 82.77
d1t2da1150 Lactate dehydrogenase {Malaria parasite (Plasmodiu 82.71
d1p2fa2120 Response regulator DrrB {Thermotoga maritima [TaxI 82.37
d1jbea_128 CheY protein {Escherichia coli [TaxId: 562]} 81.89
d1hxha_253 3beta/17beta hydroxysteroid dehydrogenase {Comamon 81.61
d1ny5a1137 Transcriptional activator sigm54 (NtrC1), N-termin 81.38
d1luaa1191 Methylene-tetrahydromethanopterin dehydrogenase {M 81.29
d2ldxa1159 Lactate dehydrogenase {Mouse (Mus musculus) [TaxId 81.04
d1mb3a_123 Cell division response regulator DivK {Caulobacter 80.91
d2b4aa1118 Hypothetical protein BH3024 {Bacillus halodurans [ 80.72
d1nyta1170 Shikimate 5-dehydrogenase AroE {Escherichia coli [ 80.72
d1ja9a_259 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl 80.56
d1h5qa_260 Mannitol dehydrogenase {Mushroom (Agaricus bisporu 80.49
>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.9e-65  Score=487.54  Aligned_cols=289  Identities=69%  Similarity=1.287  Sum_probs=268.4

Q ss_pred             cccccceeccccCCCccccccccCCCCCcccceeeeeeeEEEeeeCCCceEEEEEecCceeEEEEcCeEeecccchhHHH
Q 017607           50 TVVSGWFSESQSTSDKTGKTMYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQ  129 (369)
Q Consensus        50 ~~~~~w~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~s~~q~I~v~~~~~~G~~l~lDg~~q~~~~de~~Y~  129 (369)
                      +...+||+|.              .+.||+.+++++++++|++++|+||+|.|+++..+|++|+|||.+|++++|++.||
T Consensus         2 ~~~~~w~~e~--------------~~~~~~~~~~~~v~~~l~~~~S~yQ~i~v~~~~~~gr~L~LDg~~q~~e~de~~Yh   67 (290)
T d1xj5a_           2 TVIPGWFSEM--------------SPMWPGEAHSLKVEKVLFQGKSDYQDVIVFQSATYGKVLVLDGVIQLTERDECAYQ   67 (290)
T ss_dssp             CCCSSEEEEC--------------CTTSTTEEEEEEEEEEEEEEECSSCEEEEEEESSSCEEEEETTEEEEETTTHHHHH
T ss_pred             CCCCcceecc--------------ccCCCCceEEEEEeeEEEeCCCCCeEEEEEEeCCCCeEEEECCeEeeeccchhHHH
Confidence            3466899998              67889999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhccccCCCCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHH
Q 017607          130 EMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFL  209 (369)
Q Consensus       130 e~l~~~~l~~~~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l  209 (369)
                      ||++|+|++.|++|++||+||+|+|++++++++++++++|++||||++|+++|+++|+.....++++|++++++|+++++
T Consensus        68 e~l~h~~~~~~~~pk~VLiiGgG~G~~~r~~l~~~~~~~i~~VEiD~~Vi~~~~~~f~~~~~~~~~~r~~i~~~Da~~~l  147 (290)
T d1xj5a_          68 EMITHLPLCSIPNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFL  147 (290)
T ss_dssp             HHHHHHHHTTSSCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHH
T ss_pred             HHHhhHHHhhCCCCcceEEecCCchHHHHHHHhcccceeeEEecCCHHHHHHHHHhchhhhccccCCCcEEEEccHHHHH
Confidence            99999999999999999999999999999999999899999999999999999999988766678999999999999999


Q ss_pred             hhCCCCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecccccchhhhHHHHHHHHHHHHCCCCeeEEEEEE
Q 017607          210 RQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKGSVHYAWASV  289 (369)
Q Consensus       210 ~~~~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~i~~~l~~~F~~~v~~~~~~v  289 (369)
                      ++..+++||+||+|+++|.+++..|++.+||+.++++|+|||++++|+++++...+.++.+.++++++|++++.|+++.+
T Consensus       148 ~~~~~~~yDvIi~D~~dp~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~~s~~~~~~~~~~i~~~l~~vF~~~~~y~~~~v  227 (290)
T d1xj5a_         148 KNAAEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAESLWLHMDIIEDIVSNCREIFKGSVNYAWTSV  227 (290)
T ss_dssp             HTSCTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHHHCSSCEEEEEEEC
T ss_pred             hhccccCccEEEEcCCCCCCcchhhCCHHHHHHHHHhcCCCcEEEEecCCcHHHHHHHHHHHhhhhhhcccceeEeeEee
Confidence            87655689999999999999999999999999999999999999999999999999999999999999998888888999


Q ss_pred             eeccCCcEEEEEeecCCCCCCCCCCCCchhhhcccccCCCCCeeeCHHHHHHHhcCCHHHHHHhh
Q 017607          290 PTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFLKREVS  354 (369)
Q Consensus       290 P~~p~g~w~f~~ask~~~~~~~~~p~~~~~~~~~~~~~~~~~~yy~~~~h~a~f~lP~~~~~~l~  354 (369)
                      |+|++|.|+|++||++.++.++.+|..+++..  ..+...+|||||+++|+|||+||+|+|++|+
T Consensus       228 Pty~~g~w~f~~as~~~~~~~~~~~~~~~~~~--~~~~~~~l~yYn~~ih~~~F~lP~~~~~~l~  290 (290)
T d1xj5a_         228 PTYPSGVIGFMLCSTEGPDVDFKHPLNPIDES--SSKSNGPLKFYNAEIHSAAFCLPSFAKKVIE  290 (290)
T ss_dssp             TTSGGGEEEEEEEECSSSCCCSSSCSSCCCSG--GGTTTCCCSSCCHHHHHHTTCCCHHHHHHHC
T ss_pred             eeecCCceEEEEEeCCCCccccccccchhHHH--HHhhcCCCcccCHHHHHHHccCcHHHHHhhC
Confidence            99999999999999998888888887665533  2344568999999999999999999999874
>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]} Back     information, alignment and structure
>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1yzha1 c.66.1.53 (A:8-211) tRNA (guanine-N(7)-)-methyltransferase TrmB {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]} Back     information, alignment and structure
>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]} Back     information, alignment and structure
>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Back     information, alignment and structure
>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]} Back     information, alignment and structure
>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]} Back     information, alignment and structure
>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]} Back     information, alignment and structure
>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]} Back     information, alignment and structure
>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]} Back     information, alignment and structure
>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]} Back     information, alignment and structure
>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure
>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]} Back     information, alignment and structure
>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]} Back     information, alignment and structure
>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]} Back     information, alignment and structure
>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]} Back     information, alignment and structure
>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]} Back     information, alignment and structure
>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d2fpoa1 c.66.1.46 (A:10-192) Methylase YhhF {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]} Back     information, alignment and structure
>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Back     information, alignment and structure
>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d2h00a1 c.66.1.54 (A:5-254) Methyltransferase 10 domain containing protein METT10D {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2ifta1 c.66.1.46 (A:11-193) Putative methylase HI0767 {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase, INMT {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine N-methyltransferase, PNMTase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2dula1 c.66.1.58 (A:3-377) N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d2f8la1 c.66.1.45 (A:2-329) Hypothetical protein Lmo1582 {Listeria monocytogenes [TaxId: 1639]} Back     information, alignment and structure
>d1qama_ c.66.1.24 (A:) rRNA adenine dimethylase {Bacillus subtilis, Ermc' [TaxId: 1423]} Back     information, alignment and structure
>d1fp1d2 c.66.1.12 (D:129-372) Chalcone O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]} Back     information, alignment and structure
>d2ih2a1 c.66.1.27 (A:21-243) DNA methylase TaqI, N-terminal domain {Thermus aquaticus [TaxId: 271]} Back     information, alignment and structure
>d2bm8a1 c.66.1.50 (A:2-233) Cephalosporin hydroxylase CmcI {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d1fp2a2 c.66.1.12 (A:109-352) Isoflavone O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]} Back     information, alignment and structure
>d1uwva2 c.66.1.40 (A:75-432) rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1yuba_ c.66.1.24 (A:) rRNA adenine dimethylase {Streptococcus pneumoniae, Ermam [TaxId: 1313]} Back     information, alignment and structure
>d1kyza2 c.66.1.12 (A:120-362) Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]} Back     information, alignment and structure
>d1jsxa_ c.66.1.20 (A:) Glucose-inhibited division protein B (GidB) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ej0a_ c.66.1.2 (A:) RNA methyltransferase FtsJ {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1sqga2 c.66.1.38 (A:145-428) Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1xdza_ c.66.1.20 (A:) Glucose-inhibited division protein B (GidB) {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1zq9a1 c.66.1.24 (A:36-313) Probable dimethyladenosine transferase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1af7a2 c.66.1.8 (A:92-284) Chemotaxis receptor methyltransferase CheR, C-terminal domain {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1qyra_ c.66.1.24 (A:) High level kasugamycin resistance protein KsgA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ixka_ c.66.1.38 (A:) Hypothetical methyltransferase PH1374 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d2oyra1 c.66.1.55 (A:1-250) Hypothetical protein YhiQ {Shigella flexneri [TaxId: 623]} Back     information, alignment and structure
>d2okca1 c.66.1.45 (A:9-433) Type I restriction enzyme StySJI M protein {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure
>d2b9ea1 c.66.1.38 (A:133-425) NOL1R {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2p41a1 c.66.1.25 (A:8-264) An RNA cap (nucleoside-2'-O-)-methyltransferase domain of RNA polymerase NS5 {Dengue virus 2 [TaxId: 11060]} Back     information, alignment and structure
>d1i4wa_ c.66.1.24 (A:) Transcription factor sc-mtTFB {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Back     information, alignment and structure
>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Back     information, alignment and structure
>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Back     information, alignment and structure
>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} Back     information, alignment and structure
>d2ar0a1 c.66.1.45 (A:6-529) M.EcoKI {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Back     information, alignment and structure
>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Back     information, alignment and structure
>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Back     information, alignment and structure
>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Back     information, alignment and structure
>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Back     information, alignment and structure
>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Back     information, alignment and structure
>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} Back     information, alignment and structure
>d1g60a_ c.66.1.11 (A:) Methyltransferase mboII {Moraxella bovis [TaxId: 476]} Back     information, alignment and structure
>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1eg2a_ c.66.1.11 (A:) m.RsrI N6 adenosine-specific DNA methyltransferase {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1booa_ c.66.1.11 (A:) m.PvuII N4 cytosine-specific DNA methyltransferase {Proteus vulgaris [TaxId: 585]} Back     information, alignment and structure
>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} Back     information, alignment and structure
>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d2oo3a1 c.66.1.59 (A:9-279) Uncharacterized protein LPG1296 {Legionella pneumophila [TaxId: 446]} Back     information, alignment and structure
>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Back     information, alignment and structure
>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} Back     information, alignment and structure
>d1dcta_ c.66.1.26 (A:) DNA methylase HaeIII {Haemophilus aegyptius [TaxId: 197575]} Back     information, alignment and structure
>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} Back     information, alignment and structure
>d1g55a_ c.66.1.26 (A:) DNMT2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} Back     information, alignment and structure
>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1booa_ c.66.1.11 (A:) m.PvuII N4 cytosine-specific DNA methyltransferase {Proteus vulgaris [TaxId: 585]} Back     information, alignment and structure
>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1g60a_ c.66.1.11 (A:) Methyltransferase mboII {Moraxella bovis [TaxId: 476]} Back     information, alignment and structure
>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Back     information, alignment and structure
>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} Back     information, alignment and structure
>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} Back     information, alignment and structure
>d1eg2a_ c.66.1.11 (A:) m.RsrI N6 adenosine-specific DNA methyltransferase {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d2c7pa1 c.66.1.26 (A:1-327) DNA methylase HhaI {Haemophilus haemolyticus [TaxId: 726]} Back     information, alignment and structure
>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Back     information, alignment and structure
>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Back     information, alignment and structure
>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} Back     information, alignment and structure
>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Back     information, alignment and structure
>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} Back     information, alignment and structure
>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Back     information, alignment and structure
>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} Back     information, alignment and structure
>d1dz3a_ c.23.1.1 (A:) Sporulation response regulator Spo0A {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1o9ga_ c.66.1.29 (A:) rRNA methyltransferase AviRa {Streptomyces viridochromogenes [TaxId: 1938]} Back     information, alignment and structure
>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Back     information, alignment and structure
>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} Back     information, alignment and structure
>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} Back     information, alignment and structure
>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1zesa1 c.23.1.1 (A:3-123) PhoB receiver domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1qkka_ c.23.1.1 (A:) Transcriptional regulatory protein DctD, receiver domain {Sinorhizobium meliloti [TaxId: 382]} Back     information, alignment and structure
>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1kgsa2 c.23.1.1 (A:2-123) PhoB receiver domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1dbwa_ c.23.1.1 (A:) Transcriptional regulatory protein FixJ, receiver domain {Rhizobium meliloti [TaxId: 382]} Back     information, alignment and structure
>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1yioa2 c.23.1.1 (A:3-130) Response regulatory protein StyR, N-terminal domain {Pseudomonas fluorescens [TaxId: 294]} Back     information, alignment and structure
>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Back     information, alignment and structure
>d1zkda1 c.66.1.52 (A:2-366) Hypothetical protein RPA4359 {Rhodopseudomonas palustris [TaxId: 1076]} Back     information, alignment and structure
>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} Back     information, alignment and structure
>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Back     information, alignment and structure
>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1mvoa_ c.23.1.1 (A:) PhoP receiver domain {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d2pl1a1 c.23.1.1 (A:1-119) PhoP receiver domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Back     information, alignment and structure
>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1a04a2 c.23.1.1 (A:5-142) Nitrate/nitrite response regulator (NarL), receiver domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} Back     information, alignment and structure
>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Back     information, alignment and structure
>d1ys7a2 c.23.1.1 (A:7-127) Transcriptional regulatory protein PrrA, N-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Back     information, alignment and structure
>d1p2fa2 c.23.1.1 (A:1-120) Response regulator DrrB {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1jbea_ c.23.1.1 (A:) CheY protein {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Back     information, alignment and structure
>d1ny5a1 c.23.1.1 (A:1-137) Transcriptional activator sigm54 (NtrC1), N-terminal domain {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Back     information, alignment and structure
>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1mb3a_ c.23.1.1 (A:) Cell division response regulator DivK {Caulobacter crescentus [TaxId: 155892]} Back     information, alignment and structure
>d2b4aa1 c.23.1.1 (A:2-119) Hypothetical protein BH3024 {Bacillus halodurans [TaxId: 86665]} Back     information, alignment and structure
>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Back     information, alignment and structure
>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Back     information, alignment and structure