Citrus Sinensis ID: 017620
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 368 | ||||||
| 357165547 | 468 | PREDICTED: GPCR-type G protein 1-like [B | 0.989 | 0.777 | 0.868 | 0.0 | |
| 413919414 | 468 | hypothetical protein ZEAMMB73_364791 [Ze | 0.989 | 0.777 | 0.865 | 0.0 | |
| 413919411 | 484 | hypothetical protein ZEAMMB73_364791 [Ze | 0.983 | 0.747 | 0.864 | 0.0 | |
| 225454688 | 468 | PREDICTED: GPCR-type G protein 1 [Vitis | 1.0 | 0.786 | 0.918 | 1e-180 | |
| 38345777 | 468 | OSJNBa0083N12.15 [Oryza sativa Japonica | 0.989 | 0.777 | 0.868 | 1e-179 | |
| 125591520 | 468 | hypothetical protein OsJ_16035 [Oryza sa | 0.989 | 0.777 | 0.868 | 1e-179 | |
| 116310918 | 468 | B0403H10-OSIGBa0105A11.8 [Oryza sativa I | 0.989 | 0.777 | 0.868 | 1e-179 | |
| 449455238 | 480 | PREDICTED: GPCR-type G protein 1-like [C | 0.997 | 0.764 | 0.910 | 1e-178 | |
| 356538676 | 468 | PREDICTED: GPCR-type G protein 2-like [G | 0.989 | 0.777 | 0.906 | 1e-177 | |
| 356543187 | 468 | PREDICTED: GPCR-type G protein 2-like [G | 0.989 | 0.777 | 0.906 | 1e-177 |
| >gi|357165547|ref|XP_003580421.1| PREDICTED: GPCR-type G protein 1-like [Brachypodium distachyon] | Back alignment and taxonomy information |
|---|
Score = 654 bits (1686), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/364 (86%), Positives = 346/364 (95%)
Query: 5 SGVRKERAALGAILFLLAFLYAFWRMGIHFPMPSPEKGFFTIPQLVSRIGVIGVTVMAVL 64
SGVR++RA L A LFL+ FLY FWRMGIHFPMPSPEKGFFT+PQLVSRIGVIGV+VMAVL
Sbjct: 105 SGVRRQRAFLVAALFLMVFLYGFWRMGIHFPMPSPEKGFFTMPQLVSRIGVIGVSVMAVL 164
Query: 65 AGFGAVNLPYSYLSLFIREIDESEIKALERQLMQSIETCIAKKKKIILCQMEMDRIQGSE 124
+GFGAVNLPYSYLSLFIREIDE++IKALERQLMQS+ETCIAKKKKI+L +MEM+RIQGSE
Sbjct: 165 SGFGAVNLPYSYLSLFIREIDETDIKALERQLMQSMETCIAKKKKIVLSKMEMERIQGSE 224
Query: 125 EKLKARSFFKRIVGTVVRSVQDDQKEQDIKIMEAEVQALEELSKQLFLEIYELRQAKEAA 184
EKLKARSF KRIVGTVVRSVQ+DQ EQDIK +EAEVQALEELSKQLFLEIYELRQAK AA
Sbjct: 225 EKLKARSFLKRIVGTVVRSVQEDQTEQDIKNLEAEVQALEELSKQLFLEIYELRQAKIAA 284
Query: 185 AYSRTWRGHMQNLLGYALSIYCVYKMIKSLQSVVFKEAGSVDPVTMTISIFLQFFDIGIN 244
AYSRTWRGH QNLLGYALS+YCVYKM+K+LQSVVFK AGSVDPVTMTI+IFL+ FDIGI+
Sbjct: 285 AYSRTWRGHFQNLLGYALSVYCVYKMLKALQSVVFKSAGSVDPVTMTITIFLRHFDIGID 344
Query: 245 AQLLSQYISLLFIGMLIVMSVRGFLMNVMKFFFAVSRVGSGSSSNVVLFLSEIMGMYFVS 304
LLSQYISL+FIGML+V+S+RGFL NVMKFFFAVSRVGSGS++NVVLFLSEIMGMYF+S
Sbjct: 345 VSLLSQYISLMFIGMLVVVSIRGFLANVMKFFFAVSRVGSGSTTNVVLFLSEIMGMYFIS 404
Query: 305 SILLIRKSLAIEYRIIITEVLGGEIQFDFYHRWFDAIFVASAFLSLLLLSAHYTSRQADK 364
SILLIRKSLA EYR+IITEVLGG+IQFDFYHRWFDAIFVASAFLSLLL+SA YTSRQADK
Sbjct: 405 SILLIRKSLANEYRVIITEVLGGDIQFDFYHRWFDAIFVASAFLSLLLISAQYTSRQADK 464
Query: 365 HPID 368
HPID
Sbjct: 465 HPID 468
|
Source: Brachypodium distachyon Species: Brachypodium distachyon Genus: Brachypodium Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|413919414|gb|AFW59346.1| hypothetical protein ZEAMMB73_364791 [Zea mays] | Back alignment and taxonomy information |
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| >gi|413919411|gb|AFW59343.1| hypothetical protein ZEAMMB73_364791 [Zea mays] | Back alignment and taxonomy information |
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| >gi|225454688|ref|XP_002270494.1| PREDICTED: GPCR-type G protein 1 [Vitis vinifera] gi|297737266|emb|CBI26467.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|38345777|emb|CAD41818.2| OSJNBa0083N12.15 [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
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| >gi|125591520|gb|EAZ31870.1| hypothetical protein OsJ_16035 [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
|---|
| >gi|116310918|emb|CAH67856.1| B0403H10-OSIGBa0105A11.8 [Oryza sativa Indica Group] gi|125549595|gb|EAY95417.1| hypothetical protein OsI_17258 [Oryza sativa Indica Group] | Back alignment and taxonomy information |
|---|
| >gi|449455238|ref|XP_004145360.1| PREDICTED: GPCR-type G protein 1-like [Cucumis sativus] gi|449515035|ref|XP_004164555.1| PREDICTED: GPCR-type G protein 1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|356538676|ref|XP_003537827.1| PREDICTED: GPCR-type G protein 2-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356543187|ref|XP_003540044.1| PREDICTED: GPCR-type G protein 2-like [Glycine max] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 368 | ||||||
| TAIR|locus:2010796 | 468 | GTG1 "GPCR-type G protein 1" [ | 0.989 | 0.777 | 0.719 | 1.4e-135 | |
| UNIPROTKB|Q5F448 | 455 | GPR89 "Golgi pH regulator" [Ga | 0.834 | 0.674 | 0.446 | 1.9e-67 | |
| UNIPROTKB|B7ZAQ6 | 455 | GPR89A "Golgi pH regulator A" | 0.834 | 0.674 | 0.439 | 8.2e-67 | |
| UNIPROTKB|P0CG08 | 455 | GPR89B "Golgi pH regulator B" | 0.834 | 0.674 | 0.439 | 8.2e-67 | |
| UNIPROTKB|Q5BIM9 | 455 | GPR89A "Golgi pH regulator" [B | 0.834 | 0.674 | 0.439 | 1.3e-66 | |
| UNIPROTKB|B2ZXD5 | 455 | GPR89 "Golgi pH regulator" [Cr | 0.834 | 0.674 | 0.430 | 1.8e-64 | |
| MGI|MGI:1914799 | 455 | Gpr89 "G protein-coupled recep | 0.834 | 0.674 | 0.430 | 1.8e-64 | |
| RGD|1304837 | 389 | Gpr89b "G protein-coupled rece | 0.834 | 0.789 | 0.430 | 2.3e-64 | |
| WB|WBGene00007528 | 460 | C11H1.2 [Caenorhabditis elegan | 0.847 | 0.678 | 0.405 | 2e-63 | |
| WB|WBGene00013551 | 465 | Y75B8A.16 [Caenorhabditis eleg | 0.853 | 0.675 | 0.398 | 6.9e-63 |
| TAIR|locus:2010796 GTG1 "GPCR-type G protein 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1328 (472.5 bits), Expect = 1.4e-135, P = 1.4e-135
Identities = 262/364 (71%), Positives = 296/364 (81%)
Query: 5 SGVRKERXXXXXXXXXXXXXXXXWRMGIHFPMPSPEKGFFTIPQLVSRIGVIGVTVMAVL 64
SGVR+ER WRMG+HFPMPS +KGFFT+PQLVSRIGVIGVT+MAVL
Sbjct: 105 SGVRRERASVGAFLFLSAFLYAFWRMGVHFPMPSADKGFFTMPQLVSRIGVIGVTLMAVL 164
Query: 65 AGFGAVNLPYSYLSLFIREIDESEIKALERQLMQSIETCIAKKKKIILCQMEMDRIQGSE 124
+GFGAVNLPYSY+SLFIREI+E++I +LERQL+QS ETCIAKKKKIILCQ+E++R QGSE
Sbjct: 165 SGFGAVNLPYSYISLFIREIEEADIISLERQLIQSTETCIAKKKKIILCQLEVERNQGSE 224
Query: 125 EKLKARSFFKRIVGTVVRSVQDDQKEQDIKIMEAEVQALEELSKQLFLEIYELRQAKEAA 184
E K SFF+RIVGTVVRSVQDDQKEQDIKI+EAEV+ALEELSKQLFLE+YELRQAK+AA
Sbjct: 225 ENQKRSSFFRRIVGTVVRSVQDDQKEQDIKILEAEVEALEELSKQLFLEVYELRQAKDAA 284
Query: 185 AYSRTWRGHMQNLLGYALSIYCVYKMIKSLQSVVFKEAGSVDPVTMTISIFLQFFDIGIN 244
AYSRTW+GH+QNLLGYA SIYCVYKM+KSLQSVVFKEAG+ DPVT ISIFL+ FDIG++
Sbjct: 285 AYSRTWKGHVQNLLGYACSIYCVYKMLKSLQSVVFKEAGTKDPVTTMISIFLRLFDIGVD 344
Query: 245 AQLLSQYISLLFIGMLIVMSVRGFLMNVMKXXXXXXXXXXXXXXXXXXXXXEIMGMYFVS 304
A LLSQYISLLFIGMLIV+SVRGFL N+MK EIMGMYF+S
Sbjct: 345 AALLSQYISLLFIGMLIVISVRGFLTNLMKFFFAVSRVGSGSSSNVVLFLSEIMGMYFLS 404
Query: 305 SILLIRKSLAIEYRIIITEVLGGEIQFDFYHRWFDAIFVXXXXXXXXXXXXHYTSRQADK 364
SILLIRKSL EYR IIT+VLGG+IQFDFYHRWFDAIFV HYTSRQ+DK
Sbjct: 405 SILLIRKSLRNEYRGIITDVLGGDIQFDFYHRWFDAIFVASAFLSLVLLSAHYTSRQSDK 464
Query: 365 HPID 368
H I+
Sbjct: 465 HAIE 468
|
|
| UNIPROTKB|Q5F448 GPR89 "Golgi pH regulator" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| UNIPROTKB|B7ZAQ6 GPR89A "Golgi pH regulator A" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P0CG08 GPR89B "Golgi pH regulator B" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q5BIM9 GPR89A "Golgi pH regulator" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|B2ZXD5 GPR89 "Golgi pH regulator" [Cricetulus griseus (taxid:10029)] | Back alignment and assigned GO terms |
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| MGI|MGI:1914799 Gpr89 "G protein-coupled receptor 89" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| RGD|1304837 Gpr89b "G protein-coupled receptor 89B" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| WB|WBGene00007528 C11H1.2 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
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| WB|WBGene00013551 Y75B8A.16 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 368 | |||
| pfam12430 | 99 | pfam12430, ABA_GPCR, Abscisic acid G-protein coupl | 3e-31 | |
| pfam12537 | 71 | pfam12537, DUF3735, Protein of unknown function (D | 8e-21 |
| >gnl|CDD|221573 pfam12430, ABA_GPCR, Abscisic acid G-protein coupled receptor | Back alignment and domain information |
|---|
Score = 113 bits (285), Expect = 3e-31
Identities = 48/98 (48%), Positives = 70/98 (71%)
Query: 263 MSVRGFLMNVMKFFFAVSRVGSGSSSNVVLFLSEIMGMYFVSSILLIRKSLAIEYRIIIT 322
S+RG L + FF A+ + S SS+ +VLFL+EIMG+YF+S++LL+R +L EYR IIT
Sbjct: 2 TSIRGVLTTLSSFFRALPGLLSSSSNLLVLFLAEIMGIYFISTVLLLRSNLPAEYRSIIT 61
Query: 323 EVLGGEIQFDFYHRWFDAIFVASAFLSLLLLSAHYTSR 360
++LG +++F FY RWFD IF+ SA L+ + L + SR
Sbjct: 62 DILGSDLEFRFYDRWFDKIFLLSALLTAIGLYLAHKSR 99
|
This domain family is found in eukaryotes, and is typically between 177 and 216 amino acids in length. This family is part of the abscisic acid (ABA) G-protein coupled receptor. ABA is a stress hormone in plants. Length = 99 |
| >gnl|CDD|221626 pfam12537, DUF3735, Protein of unknown function (DUF3735) | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 368 | |||
| KOG2417 | 462 | consensus Predicted G-protein coupled receptor [Si | 100.0 | |
| PF12430 | 196 | ABA_GPCR: Abscisic acid G-protein coupled receptor | 100.0 | |
| PF12537 | 72 | DUF3735: Protein of unknown function (DUF3735); In | 99.93 | |
| PF04791 | 471 | LMBR1: LMBR1-like membrane protein; InterPro: IPR0 | 93.25 | |
| PRK11546 | 143 | zraP zinc resistance protein; Provisional | 88.4 |
| >KOG2417 consensus Predicted G-protein coupled receptor [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-116 Score=844.77 Aligned_cols=358 Identities=53% Similarity=0.896 Sum_probs=340.8
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcccccchhhceehhhHHHHHHhhccccccccccccccccccCC
Q 017620 6 GVRKERAALGAILFLLAFLYAFWRMGIHFPMPSPEKGFFTIPQLVSRIGVIGVTVMAVLAGFGAVNLPYSYLSLFIREID 85 (368)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~l~~FwklG~~~p~~s~~~g~~~~e~~isRvgViGVt~mA~LSGfGAVs~Py~~~~~f~r~Vt 85 (368)
+++|++++++++.+|.+|+|+|||+|||||++||+||+|+|||.+|||||||||+||+||||||||+||+||++|.|||+
T Consensus 105 ~v~~k~~~~~s~l~w~~FlYffWkiGdpFPmlSakhGiftieQliSRvgVIGVTlMAvLSGFGAVN~PYsyms~FiR~Ve 184 (462)
T KOG2417|consen 105 GVRRKLALPFTILFWFIFLYFFWKIGDPFPMLSAKHGIFTIEQLISRVGVIGVTLMAVLSGFGAVNAPYSYMSYFIRPVE 184 (462)
T ss_pred cchHHHHhHHHHHHHHHHHHHHHHhCCCCCCCCcccceeeHHHHHhhhhhhhhhHHHHHhccCccCCchhhhhhhhcccc
Confidence 58899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhchhhhhhhceeccccCcchhHhHHHHHHHHHHHHH
Q 017620 86 ESEIKALERQLMQSIETCIAKKKKIILCQMEMDRIQGSEEKLKARSFFKRIVGTVVRSVQDDQKEQDIKIMEAEVQALEE 165 (368)
Q Consensus 86 ~~dI~~~e~~l~~t~~~l~~Kk~rl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~EI~~Le~ 165 (368)
|.||.++||||.||+||+.+||||+++++-+. +...+++.++.++|+.|.+|...++.++++.++||+.||+|+++||+
T Consensus 185 e~di~~lErrL~qtmdmiisKKkk~a~~~l~~-~~l~~e~~~k~pSff~r~w~~~~~~~~~~~~~~~i~~lq~EV~~LEe 263 (462)
T KOG2417|consen 185 ETDIIQLERRLAQTMDMIISKKKKMAMAQLEE-KRLQSEKVQKEPSFFRRFWGMFSSSVQDNTLSSDIKLLQQEVEPLEE 263 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCchhcccCCcHHHHHHHHHHHHhccccchhhHHHHHHHHHHHHH
Confidence 99999999999999999999999999888532 22333335667899999997544555666778899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCchhhhHHHHhhhheehhhhHHHHHHHHHHHhccCCCCChHHHHHHHHHhhccccccH
Q 017620 166 LSKQLFLEIYELRQAKEAAAYSRTWRGHMQNLLGYALSIYCVYKMIKSLQSVVFKEAGSVDPVTMTISIFLQFFDIGINA 245 (368)
Q Consensus 166 l~~~L~~el~~L~~~~~~~~~s~T~~Gr~~~~~g~~fsiYCvyKi~~t~~~~~f~~~~~~DPit~~L~~~~~~~~~~~d~ 245 (368)
++||||+|+.||+++++|.++||||+|+++|++||+||+||||||+++++|++|+|.+++||+||.+++.++++|++.|+
T Consensus 264 LsrqLFLE~~eLr~~ker~~~SkTfkG~yfN~LG~ffSiYCvwKif~s~inIvFdrvGk~DPVTr~IeI~v~~~gi~~Dv 343 (462)
T KOG2417|consen 264 LSRQLFLELVELRQMKERVAFSKTFKGKYFNVLGHFFSIYCVWKIFMSLINIVFDRVGKVDPVTRGIEITVNYLGIDFDV 343 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHhhHhhhhHhHHHHHHHHHHHHHHHHhhhccCcCCccceeEEEEEEecccchH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhccCCCCcchHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHh
Q 017620 246 QLLSQYISLLFIGMLIVMSVRGFLMNVMKFFFAVSRVGSGSSSNVVLFLSEIMGMYFVSSILLIRKSLAIEYRIIITEVL 325 (368)
Q Consensus 246 ~~~s~~ISf~L~G~liv~S~r~~L~tl~~~~~~~s~~~s~~~~~ivL~laqlmG~YfiSt~LLlRsnLP~~~~~~i~~vL 325 (368)
..|+|||||+|+|+|+++|+||+|.|++||+++.++++++|. ++|+++|+|||||+|++||||+|+|.|||.+++++|
T Consensus 344 ~fwsQyISf~lVG~i~vtSvRGll~tltkf~y~~~~s~ssn~--ivl~l~qimgmyf~ssvllirms~p~Eyr~iit~Vl 421 (462)
T KOG2417|consen 344 SFWSQYISFFLVGVIAVTSVRGLLITLTKFFYSISSSKSSNI--IVLFLAQIMGMYFVSSVLLIRMSMPAEYRTIITEVL 421 (462)
T ss_pred HHHHHHHHHHhhheeEEeehhhhhhhhhhhhheecccccccc--hHHHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999998 999999999999999999999999999999999999
Q ss_pred cCCccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccccCCC
Q 017620 326 GGEIQFDFYHRWFDAIFVASAFLSLLLLSAHYTSRQADKHPI 367 (368)
Q Consensus 326 g~~lef~f~~~wFD~iFliSa~~T~~~l~~~~~~~~~~~~~~ 367 (368)
| |++|||||||||.+|++||+.|+++++++||.+++|+|+.
T Consensus 422 G-dlqfnfyhRwfdviFl~Sa~~si~~L~l~~k~~~~~~~a~ 462 (462)
T KOG2417|consen 422 G-DLQFNFYHRWFDVIFLVSALSSILFLYLHHKSRQSDKHAI 462 (462)
T ss_pred h-hhcchhHHHHHHHHHHHHHHHHHHHHHHHhccccccccCC
Confidence 9 9999999999999999999999999999999999999974
|
|
| >PF12430 ABA_GPCR: Abscisic acid G-protein coupled receptor | Back alignment and domain information |
|---|
| >PF12537 DUF3735: Protein of unknown function (DUF3735); InterPro: IPR022535 This conserved domain is found in a subunit of a voltage dependent anion channel required for acidification and functions of the Golgi apparatus; it may function in counter-ion conductance | Back alignment and domain information |
|---|
| >PF04791 LMBR1: LMBR1-like membrane protein; InterPro: IPR006876 This group of uncharacterised proteins have a conserved C-terminal region which is found in LMBR1 and in the lipocalin-1 receptor | Back alignment and domain information |
|---|
| >PRK11546 zraP zinc resistance protein; Provisional | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 368 | |||
| 4dzn_A | 33 | Coiled-coil peptide CC-PIL; de novo protein; HET: | 86.34 |
| >4dzn_A Coiled-coil peptide CC-PIL; de novo protein; HET: PHI; 1.59A {Synthetic} PDB: 4dzm_A* 4dzl_A* 4dzk_A 1u0i_A 1u0i_B | Back alignment and structure |
|---|
Probab=86.34 E-value=1.5 Score=27.57 Aligned_cols=28 Identities=32% Similarity=0.440 Sum_probs=21.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017620 152 DIKIMEAEVQALEELSKQLFLEIYELRQ 179 (368)
Q Consensus 152 ~i~~L~~EI~~Le~l~~~L~~el~~L~~ 179 (368)
||++|+|||.+|+.--..|-.|+..|++
T Consensus 3 eiaalkqeiaalkkeiaalkfeiaalkq 30 (33)
T 4dzn_A 3 EIAALKQEIAALKKEIAALKFEIAALKQ 30 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 6788888988888766777777777664
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00