Citrus Sinensis ID: 017672

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------37
Protein Sequence
MKSLLCRNAFTASQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYPEIQKQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAWKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWGKNREERINKIVGNDNDEENPEGKEEITMESTINNH
Secondary Structure (PSIPRED)
ccccccHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccHHHHHHHHHHHccccEEEEEEEEEEEEEEHHHHHHHHHHHHHHHccccccccccccHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHcccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHEEEHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccHEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mksllcrnaftasqkPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASlalspfafflesqnasplsySSVCKIFLVSLFGLTLSLNLYYVAINYTTAtfaaattntiPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAfvkgpplrflnwypeiqkqvsessptndcpigrWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAernpsawklgwdIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWGKNREERINKIvgndndeenpegkeeitmESTINNH
Flexible Loop (DISEMBL)
MKSLLCRNAFTASQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYPEIQKqvsessptndcPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAWKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWGKNREErinkivgndndeenpegkeeitmestinnh
Low Complexity Region (SEG)
MKSLLCRNAFTASQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQafaslalspfafflesQNASPLSYSSVCKIFLVSLFGLTLSLNLYYVainyttatfaaattntipaitfVLAGLLRIESISIKYLHGIAKvlgsvvsvsgalvfafvKGPPLRFLNWYPEIQKQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAWKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHwgsvggavllvgglysvlwgKNREERINKIVGNDNDEENPEGKEEITMESTINNH
Disordered region (IsUnstruct)
****LCRNAFTASQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYPEIQKQ*******NDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAWKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWGKNREERI****************************
Disordered Region (DISOPRED)
*************QKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNW********************RWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAWKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLW************************************
Disordered Region (DISEMBL)
MKSLLCRNAFTASQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYPEIQK********NDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAWKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWGKNREERINKIVGNDND*******************
Disordered Region (DISPRO)
******RNAFTASQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNW*******************GRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAWKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWGKN*********************************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKSLLCRNAFTASQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYPEIQKQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAWKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWGKNREERINKIVGNDNDEENPEGKEEITMESTINNH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	368	2.2.26 [Sep-21-2011]
Q6NMB7	343	WAT1-related protein At1g	yes	no	0.907	0.973	0.594	1e-105
Q9FGG3	359	WAT1-related protein At5g	no	no	0.921	0.944	0.465	8e-79
Q9FL41	402	WAT1-related protein At5g	no	no	0.964	0.883	0.381	6e-69
F4HZQ7	389	WAT1-related protein At1g	no	no	0.907	0.858	0.372	7e-69
F4IJ08	394	WAT1-related protein At2g	no	no	0.894	0.835	0.360	3e-66
O80638	374	WAT1-related protein At2g	no	no	0.934	0.919	0.366	1e-64
Q9ZUS1	380	WAT1-related protein At2g	no	no	0.929	0.9	0.354	7e-63
Q9LPF1	370	WAT1-related protein At1g	no	no	0.934	0.929	0.338	1e-62
Q9SUF1	384	WAT1-related protein At4g	no	no	0.940	0.901	0.352	8e-62
Q6J163	410	Auxin-induced protein 5NG	N/A	no	0.951	0.853	0.346	2e-59

>sp|Q6NMB7|WTR7_ARATH WAT1-related protein At1g43650 OS=Arabidopsis thaliana GN=At1g43650 PE=2 SV=1

 Score =  382 bits (981), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 204/343 (59%), Positives = 257/343 (74%), Gaps = 9/343 (2%)

Query: 13  SQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNAS 72
             K  +AM+FVQ  YAGM L SK AI++G NPFVFV YRQAFA+LALSPFAFFLES  +S
Sbjct: 4   EHKANMAMVFVQIVYAGMPLLSKVAISQGTNPFVFVFYRQAFAALALSPFAFFLESSKSS 63

Query: 73  PLSYSSVCKIFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESI 132
           PLS+  + KIF +SL GLTLSLNLYYVAI  TTATFAAATTN IP+ITFVLA L R+E++
Sbjct: 64  PLSFILLLKIFFISLCGLTLSLNLYYVAIENTTATFAAATTNAIPSITFVLALLFRLETV 123

Query: 133 SIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYPEIQKQVSESSPTNDCPIGR-W 191
           ++K  HG+AKV GS+V + GALVFAFVKGP L  +N Y       S + P    P  +  
Sbjct: 124 TLKKSHGVAKVTGSMVGMLGALVFAFVKGPSL--INHYN------SSTIPNGTVPSTKNS 175

Query: 192 IKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAW 251
           +KG++ M++ANT W LW+++Q  ++K+YPAK+RL  LQC FSCIQSA WAVA  RNPS W
Sbjct: 176 VKGSITMLAANTCWCLWIIMQSKVMKEYPAKLRLVALQCLFSCIQSAVWAVAVNRNPSVW 235

Query: 252 KLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKET 311
           K+ + + L+S+ YCG+++ G+TYW+QVWAIEKKGPVF A++TP ALI+T I S+FL+KET
Sbjct: 236 KIEFGLPLLSMAYCGIMVTGLTYWLQVWAIEKKGPVFTALYTPLALILTCIVSSFLFKET 295

Query: 312 LHWGSVGGAVLLVGGLYSVLWGKNREERINKIVGNDNDEENPE 354
            + GSVGGAVLLV GLY  LWGK +EE I +     + +E  E
Sbjct: 296 FYLGSVGGAVLLVCGLYLGLWGKTKEEEIQRYGEKQSQKEIIE 338

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FGG3|WTR45_ARATH WAT1-related protein At5g64700 OS=Arabidopsis thaliana GN=At5g64700 PE=2 SV=1

 Score =  294 bits (752), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 163/350 (46%), Positives = 230/350 (65%), Gaps = 11/350 (3%)

Query: 13  SQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNAS 72
           S+KPY+ +  +Q  Y  M L SKA    GMN FVFV YRQAFA++ L+P AFF E ++A 
Sbjct: 5   SKKPYLMVTIIQVIYTIMFLISKAVFNGGMNTFVFVFYRQAFATIFLAPLAFFFERKSAP 64

Query: 73  PLSYSSVCKIFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESI 132
           PLS+ +  KIF++SLFG+TLSL+L  +A++YT+AT AAATT ++PAITF LA L  +E +
Sbjct: 65  PLSFVTFIKIFMLSLFGVTLSLDLNGIALSYTSATLAAATTASLPAITFFLALLFGMERL 124

Query: 133 SIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYPEIQKQVSESSPTNDCPIG--- 189
            +K + G AK++G  V + G ++ A  KGP L+ L   P            N   +    
Sbjct: 125 KVKSIQGTAKLVGITVCMGGVIILAIYKGPLLK-LPLCPHFYHGQEHPHRNNPGHVSGGS 183

Query: 190 -RWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNP 248
             W+KG ++MI++N  W LWLVLQG ++K YP+K+  TTL C  S IQS   A+A ER+ 
Sbjct: 184 TSWLKGCVLMITSNILWGLWLVLQGRVLKVYPSKLYFTTLHCLLSSIQSFVIAIALERDI 243

Query: 249 SAWKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLW 308
           SAWKLGW++ LV+V+YCG ++ G+ Y++Q W IEK+GPVF+++FTP +L+ T + SA L 
Sbjct: 244 SAWKLGWNLRLVAVIYCGFIVTGVAYYLQSWVIEKRGPVFLSMFTPLSLLFTLLSSAILL 303

Query: 309 KETLHWGSVGGAVLLVGGLYSVLWGKNREERINKIVGNDNDEENPEGKEE 358
            E +  GS+ G +LL+ GLY VLWGK+REE+      N  D++    KE 
Sbjct: 304 CEIISLGSIVGGLLLIIGLYCVLWGKSREEK------NSGDDKIDLQKEN 347

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FL41|WTR38_ARATH WAT1-related protein At5g07050 OS=Arabidopsis thaliana GN=At5g07050 PE=2 SV=1

 Score =  261 bits (667), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 139/364 (38%), Positives = 220/364 (60%), Gaps = 9/364 (2%)

Query: 1   MKSLLCRNAFTASQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALS 60
           M+ +    +F  S KPY AMI +QF YAGM + +K ++  GM+ +V VVYR A A+  ++
Sbjct: 3   MEEISSCESFLTSSKPYFAMISLQFGYAGMNIITKISLNTGMSHYVLVVYRHAIATAVIA 62

Query: 61  PFAFFLESQNASPLSYSSVCKIFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAIT 120
           PFAFF E +    +++S   ++F++ L G  +  N YY+ + YT+ TF+ A +N +PA+T
Sbjct: 63  PFAFFFERKAQPKITFSIFMQLFILGLLGPVIDQNFYYMGLKYTSPTFSCAMSNMLPAMT 122

Query: 121 FVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLR-FLNWYPEIQK--QV 177
           F+LA L R+E + +K L   AK+ G+VV+V+GA++    KGP +  F   Y  IQ     
Sbjct: 123 FILAVLFRMEMLDLKKLWCQAKIAGTVVTVAGAMLMTIYKGPIVELFWTKYMHIQDSSHA 182

Query: 178 SESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPA-KVRLTTLQCFFSCIQ 236
           + +S  N      ++KG++++I A  AW+   VLQ  I+K Y   ++ LTTL CF   +Q
Sbjct: 183 NTTSSKNSSSDKEFLKGSILLIFATLAWASLFVLQAKILKTYAKHQLSLTTLICFIGTLQ 242

Query: 237 SAFWAVAAERNPSAWKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFA 296
           +       E NPSAW++GWD++L++  Y G+V + I+Y++Q   ++K+GPVF   F+P  
Sbjct: 243 AVAVTFVMEHNPSAWRIGWDMNLLAAAYSGIVASSISYYVQGIVMKKRGPVFATAFSPLM 302

Query: 297 LIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWGKNREERIN-----KIVGNDNDEE 351
           ++I A+  +F+  E +  G V GAVL+V GLY+VLWGK +E ++      KI  N    E
Sbjct: 303 MVIVAVMGSFVLAEKIFLGGVIGAVLIVIGLYAVLWGKQKENQVTICELAKIDSNSKVTE 362

Query: 352 NPEG 355
           + E 
Sbjct: 363 DVEA 366

Arabidopsis thaliana (taxid: 3702)

>sp|F4HZQ7|WTR5_ARATH WAT1-related protein At1g21890 OS=Arabidopsis thaliana GN=At1g21890 PE=2 SV=1

 Score =  261 bits (666), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 128/344 (37%), Positives = 209/344 (60%), Gaps = 10/344 (2%)

Query: 13  SQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNAS 72
           S KPY+AMI +QF YAGM + +  ++  GMN +V  VYR A A+  ++PFA F E +   
Sbjct: 8   SLKPYLAMISMQFGYAGMYIITMVSLKHGMNHYVLAVYRHAIATAVIAPFALFHERKIRP 67

Query: 73  PLSYSSVCKIFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESI 132
            +++    +I L+      L  NLYYV + YT+ATFA+AT N +PAITFVLA + R+ES+
Sbjct: 68  KMTFRIFLQIALLGFIEPVLDQNLYYVGMTYTSATFASATANVLPAITFVLAIIFRLESV 127

Query: 133 SIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYPEIQKQVSESSPTNDCPI---- 188
           + K +  IAKV+G+V++VSGAL+    KGP + F+ +          +  ++        
Sbjct: 128 NFKKVRSIAKVVGTVITVSGALLMTLYKGPIVDFIRFGGGGGGGSDGAGGSHGGAGAAAM 187

Query: 189 -GRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERN 247
              WI G L+++     W+ + +LQ + +KQYPA++ LTTL C    ++    ++   R+
Sbjct: 188 DKHWIPGTLMLLGRTFGWAGFFILQSFTLKQYPAELSLTTLICLMGTLEGTAVSLVTVRD 247

Query: 248 PSAWKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFL 307
            SAWK+G+D +L +  Y G++ +G+ Y++Q   + ++GPVF+A F P  ++ITA     +
Sbjct: 248 LSAWKIGFDSNLFAAAYSGVICSGVAYYVQGVVMRERGPVFVATFNPLCVVITAALGVVV 307

Query: 308 WKETLHWGSVGGAVLLVGGLYSVLWGKNREERINKIVGNDNDEE 351
             E++H GSV G + ++ GLY+V+WGK +++R+      D+DE+
Sbjct: 308 LSESIHLGSVIGTLFIIVGLYTVVWGKGKDKRM-----TDDDED 346

Arabidopsis thaliana (taxid: 3702)

>sp|F4IJ08|WTR15_ARATH WAT1-related protein At2g40900 OS=Arabidopsis thaliana GN=At2g40900 PE=2 SV=1

 Score =  252 bits (643), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 122/338 (36%), Positives = 212/338 (62%), Gaps = 9/338 (2%)

Query: 11  TASQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQN 70
           + S KPY AM+ +QF YAGM L +K  + +GM+ +V V YR AFA+ A++PFA   E + 
Sbjct: 6   SESAKPYFAMVCLQFGYAGMNLVTKTVLDRGMSHYVLVAYRNAFATAAIAPFALLSERKV 65

Query: 71  ASPLSYSSVCKIFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIE 130
            S +++    +IFL++L G  +  NLYY+ +  T+ TF++A +N +PAIT +LA L R+E
Sbjct: 66  RSKMTFPIFMRIFLLALLGPVIDQNLYYIGLKLTSPTFSSAVSNIVPAITIILATLFRME 125

Query: 131 SISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYPEIQKQVSESSPTNDCPIGR 190
            + ++ +  + KV+G++V+V G+++  F KGP   F+N++       + S PT D     
Sbjct: 126 KVEMRKVRCLVKVMGTLVTVVGSILMIFYKGP---FINFFRS-HLTAASSPPTAD----- 176

Query: 191 WIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSA 250
           ++K A+ ++ A+ +W+ + VLQ   +K+Y A + ++T+ CF   +QS   A   E NPSA
Sbjct: 177 YLKAAVFLLLASLSWASFFVLQAATLKKYSAHLSMSTMVCFMGTLQSLALAFVMEHNPSA 236

Query: 251 WKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKE 310
             +G+D++L++  Y G++ + I Y++Q   +++KGPVF+  F P  ++I +I S F+  +
Sbjct: 237 LNIGFDMNLLASAYAGIMSSSIAYYVQGLMMQRKGPVFVTAFNPLIVVIVSIMSFFVLGQ 296

Query: 311 TLHWGSVGGAVLLVGGLYSVLWGKNREERINKIVGNDN 348
            ++ G V G V+L+ G+Y+VLWGK+ ++   +    DN
Sbjct: 297 GIYLGGVIGVVVLMVGVYAVLWGKHVDDDGEETRHEDN 334

Arabidopsis thaliana (taxid: 3702)

>sp|O80638|WTR14_ARATH WAT1-related protein At2g39510 OS=Arabidopsis thaliana GN=At2g39510 PE=2 SV=1

 Score =  247 bits (631), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 130/355 (36%), Positives = 214/355 (60%), Gaps = 11/355 (3%)

Query: 15  KPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPL 74
           KP+I ++ +QF YAG+++ +K A+ +GM+P V   YR   A++ ++PFA+FL+ +    +
Sbjct: 7   KPFITVVSLQFGYAGLSIIAKFALNQGMSPHVLASYRHIVATIFIAPFAYFLDRKIRPKM 66

Query: 75  SYSSVCKIFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISI 134
           + S   KI L+ L   T+  NLYY  + YT+ATF AA TN +PA  F++A + R+E +++
Sbjct: 67  TLSIFFKILLLGLLEPTIDQNLYYTGMKYTSATFTAAMTNVLPAFAFIMAWIFRLEKVNV 126

Query: 135 KYLHGIAKVLGSVVSVSGALVFAFVKGP--PLRFLNWYPEIQKQVSESSPTNDCPIGRWI 192
           K +H  AK+LG++V+V GA++   VKGP  PL + N + +I +  S +    D       
Sbjct: 127 KKIHSQAKILGTIVTVGGAMLMTVVKGPLIPLPWANPH-DIHQDSSNTGVKQDL-----T 180

Query: 193 KGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAER-NPSAW 251
           KGA ++      W+ ++ LQ   +K YP ++ LT   CF   I+S   A+  ER NPSAW
Sbjct: 181 KGASLIAIGCICWAGFINLQAITLKSYPVELSLTAYICFLGSIESTIVALFIERGNPSAW 240

Query: 252 KLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKET 311
            +  D  L++ VY G++ +GI Y++Q   ++ +GPVF+  F P +++I AI  + +  E 
Sbjct: 241 AIHLDSKLLAAVYGGVICSGIGYYVQGVIMKTRGPVFVTAFNPLSMVIVAILGSIILAEV 300

Query: 312 LHWGSVGGAVLLVGGLYSVLWGKNREERINKIVGNDNDEENPEGKEEITMESTIN 366
           +  G + GA+++V GLYSVLWGK+++E  +    +D D+E P    +I + S  N
Sbjct: 301 MFLGRILGAIVIVLGLYSVLWGKSKDEPSSSF--SDMDKELPLSTPQIVLPSKAN 353

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZUS1|WTR13_ARATH WAT1-related protein At2g37460 OS=Arabidopsis thaliana GN=At2g37460 PE=2 SV=1

 Score =  241 bits (615), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 126/355 (35%), Positives = 208/355 (58%), Gaps = 13/355 (3%)

Query: 15  KPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPL 74
           +P+I+M+ +Q   AGM + SKA + KGM+ +V VVYR A A++ ++PFAF+ + +    +
Sbjct: 14  RPFISMVVLQVGLAGMDILSKAVLNKGMSNYVLVVYRHAVATIVMAPFAFYFDKKVRPKM 73

Query: 75  SYSSVCKIFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISI 134
           +     KI L+ L    +  NLYY+ + YTTATFA A  N +PAITFVLA +  +E + +
Sbjct: 74  TLMIFFKISLLGLLEPVIDQNLYYLGMKYTTATFATAMYNVLPAITFVLAYIFGLERVKL 133

Query: 135 KYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYPEIQKQVSESSPTNDCPIGRWIKG 194
           + +    KV+G++ +V GA++   VKGP L  L W     K VS  + T    I   IKG
Sbjct: 134 RCIRSTGKVVGTLATVGGAMIMTLVKGPVLD-LFW----TKGVSAHN-TAGTDIHSAIKG 187

Query: 195 ALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAER-NPSAWKL 253
           A+++     +++ +++LQ   ++ YPA++ LT   C    I+    A+  E+ NPSAW +
Sbjct: 188 AVLVTIGCFSYACFMILQAITLRTYPAELSLTAWICLMGTIEGTAVALVMEKGNPSAWAI 247

Query: 254 GWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLH 313
           GWD  L++  Y G+V + + Y++    ++ +GPVF+  F+P  +II AI S  ++ E ++
Sbjct: 248 GWDTKLLTATYSGIVCSALAYYVGGVVMKTRGPVFVTAFSPLCMIIVAIMSTIIFAEQMY 307

Query: 314 WGSVGGAVLLVGGLYSVLWGKNREERINKIVGNDNDEENPE------GKEEITME 362
            G V GAV++  GLY V+WGK ++ + N  +  D++   P+      GK+ +  E
Sbjct: 308 LGRVLGAVVICAGLYLVIWGKGKDYKYNSTLQLDDESAQPKLELSGNGKDNVDHE 362

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LPF1|WTR8_ARATH WAT1-related protein At1g44800 OS=Arabidopsis thaliana GN=At1g44800 PE=1 SV=1

 Score =  240 bits (613), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 121/357 (33%), Positives = 209/357 (58%), Gaps = 13/357 (3%)

Query: 15  KPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPL 74
           KP +A+I +QF YAGM + +  +   GM+ +V   YR   A++ ++PFA   E +    +
Sbjct: 10  KPILAIISLQFGYAGMYIITMVSFKHGMDHWVLATYRHVVATVVMAPFALMFERKIRPKM 69

Query: 75  SYSSVCKIFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISI 134
           + +   ++  + +    +  NLYY+ +  T+A++ +A TN +PA+TF+LA + R+E+++ 
Sbjct: 70  TLAIFWRLLALGILEPLMDQNLYYIGLKNTSASYTSAFTNALPAVTFILALIFRLETVNF 129

Query: 135 KYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYPEIQKQVSESSPTNDCPIGRWIKG 194
           + +H +AKV+G+V++V GA++    KGP +  +          S S+PT       W+ G
Sbjct: 130 RKVHSVAKVVGTVITVGGAMIMTLYKGPAIEIVKAAHNSFHGGSSSTPTGQ----HWVLG 185

Query: 195 ALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAWKLG 254
            + ++ + + W+ + +LQ Y +K YPA++ L TL C    I +A  ++   R+PSAWK+G
Sbjct: 186 TIAIMGSISTWAAFFILQSYTLKVYPAELSLVTLICGIGTILNAIASLIMVRDPSAWKIG 245

Query: 255 WDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHW 314
            D   ++ VY G+V +GI Y+IQ   I+++GPVF   F+P  +IITA   A +  E +H 
Sbjct: 246 MDSGTLAAVYSGVVCSGIAYYIQSIVIKQRGPVFTTSFSPMCMIITAFLGALVLAEKIHL 305

Query: 315 GSVGGAVLLVGGLYSVLWGKNREERINKIVGNDNDEENPEGKEEITMESTI---NNH 368
           GS+ GAV +V GLYSV+WGK+++E       N  DE+     +E+ + + +   N H
Sbjct: 306 GSIIGAVFIVLGLYSVVWGKSKDEV------NPLDEKIVAKSQELPITNVVKQTNGH 356

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SUF1|WTR31_ARATH WAT1-related protein At4g08290 OS=Arabidopsis thaliana GN=At4g08290 PE=2 SV=1

 Score =  238 bits (606), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 125/355 (35%), Positives = 206/355 (58%), Gaps = 9/355 (2%)

Query: 15  KPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPL 74
           +PY+ MIF+QF  AG  +   A + +G N +V +VYR   A+L L+PFA   E +    +
Sbjct: 12  RPYLLMIFLQFGAAGTYIVIMATLNQGQNRYVVIVYRNLVAALVLAPFALIFERKVRPKM 71

Query: 75  SYSSVCKIFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISI 134
           + S + KI  +      L     Y+ +N T+AT+ +A  N +P++TF++A +LR+E ++I
Sbjct: 72  TLSVLWKIMALGFLEPVLDQGFGYLGMNMTSATYTSAIMNILPSVTFIIAWILRMEKVNI 131

Query: 135 KYLHGIAKVLGSVVSVSGALVFAFVKGP--PLRFLNWYPEIQKQVSESSPTNDCPIGRWI 192
             +   AK++G++V + GALV    KGP  PL + N  P + +Q   ++ + D     W+
Sbjct: 132 AEVRSKAKIIGTLVGLGGALVMTLYKGPLIPLPWSN--PNMDQQNGHTNNSQDH--NNWV 187

Query: 193 KGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAWK 252
            G L+++    AWS + VLQ   IK YPA + L+ L C    +QS   A+  ER+PS W 
Sbjct: 188 VGTLLILLGCVAWSGFYVLQSITIKTYPADLSLSALICLAGAVQSFAVALVVERHPSGWA 247

Query: 253 LGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETL 312
           +GWD  L + +Y G+V +GITY++Q   ++ +GPVF+  F P  +I+ A+ ++F+  E +
Sbjct: 248 VGWDARLFAPLYTGIVSSGITYYVQGMVMKTRGPVFVTAFNPLCMILVALIASFILHEQI 307

Query: 313 HWGSVGGAVLLVGGLYSVLWGKNREERINKIVGNDNDEENPEGKEEITMESTINN 367
           H+G V G  ++  GLY V+WGK ++  ++   G D  E+N   +  IT +S  +N
Sbjct: 308 HFGCVIGGAVIAAGLYMVVWGKGKDYEVS---GLDILEKNSLQELPITTKSEDDN 359

Arabidopsis thaliana (taxid: 3702)

>sp|Q6J163|5NG4_PINTA Auxin-induced protein 5NG4 OS=Pinus taeda PE=2 SV=1

 Score =  230 bits (586), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 124/358 (34%), Positives = 205/358 (57%), Gaps = 8/358 (2%)

Query: 8   NAFTASQ-KPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFL 66
           N F + + K + AM+ +QF YAG  + S+AA+  G++  VF VYR   A + + P A+FL
Sbjct: 10  NVFMSERVKLHAAMLALQFGYAGFHIVSRAALNMGVSKVVFPVYRNILALMLIGPCAYFL 69

Query: 67  ESQNASPLSYSSVCKIFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGL 126
           E +    L+ S + + FL++L G+T    +  + I     TFA+A  N++PAITF++A  
Sbjct: 70  EKKERPALTLSFLIQFFLLALCGITGQSRILSLRIVLHIPTFASAIQNSVPAITFIMAAA 129

Query: 127 LRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYPEIQKQVS--ESSPTN 184
           LR+E + I    G+AK++G+V  VSGA +    KGPP+  + W P ++   S  ++   N
Sbjct: 130 LRLEKVHISRRDGLAKIIGTVACVSGATIITLYKGPPITHI-WRPNLEVTASYFKAFQGN 188

Query: 185 DCPIG--RWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAV 242
           D       W  G + ++    AWS W+VLQ  ++K+YPA++ +T+  CFF  IQ    A 
Sbjct: 189 DLSAKSENWTLGCIYLLGNCLAWSGWIVLQAPVLKRYPARLSVTSFTCFFGVIQFLIIAA 248

Query: 243 AAERNPSAWKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAI 302
             E +   WK+     L +++Y G V +GI + +Q+W I++ GPVF+A++ P   I  AI
Sbjct: 249 FFETDLEHWKIHSGGELFTILYAGFVASGIAFSVQIWCIDRGGPVFVAVYQPVQTIAVAI 308

Query: 303 FSAFLWKETLHWGSVGGAVLLVGGLYSVLWGKNREERINKIVGNDN--DEENPEGKEE 358
            ++ +  E  + G + GA+L++ GLY VLWGK+ E+R+  +    +   E  P+  ++
Sbjct: 309 MASIILGEQFYLGGIFGAILIIIGLYLVLWGKSEEKRLGLLQAKSSMVPENQPDNMDQ 366

Pinus taeda (taxid: 3352)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	368
225460670	361	PREDICTED: auxin-induced protein 5NG4 [V	0.980	1.0	0.703	1e-141
224066683	364	predicted protein [Populus trichocarpa]	0.980	0.991	0.714	1e-140
296081175	353	unnamed protein product [Vitis vinifera]	0.948	0.988	0.719	1e-140
224082446	354	predicted protein [Populus trichocarpa]	0.940	0.977	0.723	1e-138
255587661	364	Auxin-induced protein 5NG4, putative [Ri	0.989	1.0	0.687	1e-137
357497543	362	Auxin-induced protein 5NG4 [Medicago tru	0.975	0.991	0.624	1e-126
255638680	365	unknown [Glycine max]	0.986	0.994	0.631	1e-119
356499546	361	PREDICTED: auxin-induced protein 5NG4-li	0.975	0.994	0.615	1e-118
449446508	365	PREDICTED: auxin-induced protein 5NG4-li	0.978	0.986	0.604	1e-113
356559653	366	PREDICTED: auxin-induced protein 5NG4-li	0.986	0.991	0.605	1e-110

>gi|225460670|ref|XP_002266148.1| PREDICTED: auxin-induced protein 5NG4 [Vitis vinifera] gi|147788033|emb|CAN73719.1| hypothetical protein VITISV_041298 [Vitis vinifera]

 Score =  506 bits (1304), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 259/368 (70%), Positives = 309/368 (83%), Gaps = 7/368 (1%)

Query: 1   MKSLLCRNAFTASQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALS 60
           MK L+       + +PY+AM+F+QF YAGMALFSKAAIAKGMNP+VFVVYRQA ASLAL+
Sbjct: 1   MKGLVGHVMAMENHRPYVAMLFIQFVYAGMALFSKAAIAKGMNPYVFVVYRQACASLALA 60

Query: 61  PFAFFLESQNASPLSYSSVCKIFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAIT 120
           PFAFFLE +  +PLSYS++CKIFLVSL GLTLSLNLYYVAI +T+ATFAAATTNTIPAIT
Sbjct: 61  PFAFFLERKKDAPLSYSTLCKIFLVSLCGLTLSLNLYYVAIGFTSATFAAATTNTIPAIT 120

Query: 121 FVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYPEIQKQVSES 180
           F++A  + +ESI +K+ HGIAKVLGSVV VSGA+VFAFVKGPPL+F++WYPEI+K +S+S
Sbjct: 121 FIMAVFIGMESIPMKHFHGIAKVLGSVVGVSGAMVFAFVKGPPLKFMDWYPEIKKGISDS 180

Query: 181 SPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFW 240
           S   +   G WIKG+L+M++ANTAWSLWL+LQG IIKQYPAK+RLTTLQCFFSCIQS   
Sbjct: 181 SVEQNSK-GEWIKGSLMMLAANTAWSLWLILQGPIIKQYPAKLRLTTLQCFFSCIQSVVL 239

Query: 241 AVAAERNPSAWKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIIT 300
           A   ERNPS+WKL WD++L+S+ YCG+V+ GITYW+QVW IEKKGPVF ++FTP ALIIT
Sbjct: 240 AAVVERNPSSWKLAWDLNLLSIAYCGIVVTGITYWLQVWTIEKKGPVFTSMFTPLALIIT 299

Query: 301 AIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWGKNREERINKIVGNDNDEENPEGKEEIT 360
           A+FSAFLWKETL+WGSVGGAVLLV GLYSVLWGKNRE+   K V N   E+  E KEEI 
Sbjct: 300 AVFSAFLWKETLYWGSVGGAVLLVVGLYSVLWGKNRED--GKSVTN---EQRQESKEEIV 354

Query: 361 MESTINNH 368
           +E  I +H
Sbjct: 355 LE-CITHH 361

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224066683|ref|XP_002302179.1| predicted protein [Populus trichocarpa] gi|222843905|gb|EEE81452.1| predicted protein [Populus trichocarpa]

 Score =  505 bits (1301), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 265/371 (71%), Positives = 309/371 (83%), Gaps = 10/371 (2%)

Query: 1   MKSLLCRNAFTASQ--KPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLA 58
           MKSL  R +  A +  KPY+AM+FVQF YAGMALFSKAAI+KGMN  VFVVYRQAFAS++
Sbjct: 1   MKSL--RGSLNAVENYKPYVAMLFVQFVYAGMALFSKAAISKGMNSHVFVVYRQAFASVS 58

Query: 59  LSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPA 118
           L+P AFFLE +  +PLS+S + KIFLVSL G+T+SLNLYY+AI+YTTATFAAATTNTIPA
Sbjct: 59  LAPLAFFLERKEGAPLSWSLLFKIFLVSLCGVTMSLNLYYIAISYTTATFAAATTNTIPA 118

Query: 119 ITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYPE-IQKQV 177
           ITFV+A LLR+ESISIK+LHGIAKVLGSV+ VSG LVFAFVKGPP+ F+NWYP    KQV
Sbjct: 119 ITFVMAALLRMESISIKHLHGIAKVLGSVICVSGVLVFAFVKGPPVNFMNWYPSNDHKQV 178

Query: 178 SESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQS 237
            +SS T  C    WIKG+LIMISANT WSLWLVLQG I+KQYPAK+RLTTLQC FSCIQS
Sbjct: 179 QDSSKTC-CSREEWIKGSLIMISANTLWSLWLVLQGPIVKQYPAKLRLTTLQCVFSCIQS 237

Query: 238 AFWAVAAERNPSAWKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFAL 297
           AFWA+A ERNPSAWKLGWD+ L+SV YCG+++ GI++W+QVW IEKKGP+F ++FTP AL
Sbjct: 238 AFWAIAVERNPSAWKLGWDLKLLSVAYCGIIVTGISFWLQVWVIEKKGPLFTSMFTPLAL 297

Query: 298 IITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWGKNREERINKIVGNDNDEENPEGKE 357
           IITAIFSAFLWKETLHWGS GG VLL+GGLY VLWGK REE    +     DE+N E KE
Sbjct: 298 IITAIFSAFLWKETLHWGSAGGDVLLMGGLYCVLWGKKREEDRKSVT---TDEQNTETKE 354

Query: 358 EITMESTINNH 368
           +IT+E  I +H
Sbjct: 355 KITLE-CITSH 364

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296081175|emb|CBI18201.3| unnamed protein product [Vitis vinifera]

 Score =  504 bits (1299), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 256/356 (71%), Positives = 305/356 (85%), Gaps = 7/356 (1%)

Query: 13  SQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNAS 72
           + +PY+AM+F+QF YAGMALFSKAAIAKGMNP+VFVVYRQA ASLAL+PFAFFLE +  +
Sbjct: 5   NHRPYVAMLFIQFVYAGMALFSKAAIAKGMNPYVFVVYRQACASLALAPFAFFLERKKDA 64

Query: 73  PLSYSSVCKIFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESI 132
           PLSYS++CKIFLVSL GLTLSLNLYYVAI +T+ATFAAATTNTIPAITF++A  + +ESI
Sbjct: 65  PLSYSTLCKIFLVSLCGLTLSLNLYYVAIGFTSATFAAATTNTIPAITFIMAVFIGMESI 124

Query: 133 SIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYPEIQKQVSESSPTNDCPIGRWI 192
            +K+ HGIAKVLGSVV VSGA+VFAFVKGPPL+F++WYPEI+K +S+SS   +   G WI
Sbjct: 125 PMKHFHGIAKVLGSVVGVSGAMVFAFVKGPPLKFMDWYPEIKKGISDSSVEQNSK-GEWI 183

Query: 193 KGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAWK 252
           KG+L+M++ANTAWSLWL+LQG IIKQYPAK+RLTTLQCFFSCIQS   A   ERNPS+WK
Sbjct: 184 KGSLMMLAANTAWSLWLILQGPIIKQYPAKLRLTTLQCFFSCIQSVVLAAVVERNPSSWK 243

Query: 253 LGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETL 312
           L WD++L+S+ YCG+V+ GITYW+QVW IEKKGPVF ++FTP ALIITA+FSAFLWKETL
Sbjct: 244 LAWDLNLLSIAYCGIVVTGITYWLQVWTIEKKGPVFTSMFTPLALIITAVFSAFLWKETL 303

Query: 313 HWGSVGGAVLLVGGLYSVLWGKNREERINKIVGNDNDEENPEGKEEITMESTINNH 368
           +WGSVGGAVLLV GLYSVLWGKNRE+   K V N   E+  E KEEI +E  I +H
Sbjct: 304 YWGSVGGAVLLVVGLYSVLWGKNRED--GKSVTN---EQRQESKEEIVLE-CITHH 353

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224082446|ref|XP_002306696.1| predicted protein [Populus trichocarpa] gi|222856145|gb|EEE93692.1| predicted protein [Populus trichocarpa]

 Score =  496 bits (1277), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 254/351 (72%), Positives = 294/351 (83%), Gaps = 5/351 (1%)

Query: 13  SQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNAS 72
           + KPYIAM+ VQF YAGMALFSKAAIA+GMN FVFVVYRQAFAS++L PFAFFLE + A+
Sbjct: 3   NHKPYIAMVLVQFVYAGMALFSKAAIARGMNSFVFVVYRQAFASVSLLPFAFFLERKEAA 62

Query: 73  PLSYSSVCKIFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESI 132
           PLSY  + KIFLVSL G+TLSLNLYY+AINYTTAT AAATTN IPAITF +A LLR+ESI
Sbjct: 63  PLSYGLLFKIFLVSLCGVTLSLNLYYIAINYTTATLAAATTNAIPAITFAMAALLRMESI 122

Query: 133 SIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYP-EIQKQVSESSPTNDCPIGRW 191
           SIK++HGIAKVLGSV+ VSG LV AFVKGPP++F+NW+P     Q+ +SS T  C    W
Sbjct: 123 SIKHVHGIAKVLGSVIGVSGVLVIAFVKGPPIKFMNWHPANDHGQIQDSSKTC-CSREEW 181

Query: 192 IKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAW 251
           IKG L+MISANT WSLWLVLQG IIKQYPAK+RLTTLQC FSCIQSAFWA+A ERNPS+W
Sbjct: 182 IKGTLLMISANTLWSLWLVLQGPIIKQYPAKLRLTTLQCMFSCIQSAFWAIAVERNPSSW 241

Query: 252 KLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKET 311
           KLGWD++L+SV YCG+V+ GITYW+Q+W IEKKGPVF ++FTPFALIITAIFSAFLWKET
Sbjct: 242 KLGWDVNLLSVAYCGIVVTGITYWLQIWTIEKKGPVFTSMFTPFALIITAIFSAFLWKET 301

Query: 312 LHWGSVGGAVLLVGGLYSVLWGKNREERINKIVGNDNDEENPEGKEEITME 362
            +WGSVGG VLLVGGLY VLWGK +E+  N      N +   E KE+IT+E
Sbjct: 302 FNWGSVGGDVLLVGGLYGVLWGKKKEDGRNV---TTNGQNTTETKEKITLE 349

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255587661|ref|XP_002534346.1| Auxin-induced protein 5NG4, putative [Ricinus communis] gi|223525451|gb|EEF28037.1| Auxin-induced protein 5NG4, putative [Ricinus communis]

 Score =  493 bits (1268), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 253/368 (68%), Positives = 288/368 (78%), Gaps = 4/368 (1%)

Query: 1   MKSLLCRNAFTASQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALS 60
           MKSLL         KP IAM+F QF YAGMALFSKAAI+KGMNP VFVVYRQAFAS+AL+
Sbjct: 1   MKSLLEHGNVMKDYKPCIAMLFTQFIYAGMALFSKAAISKGMNPLVFVVYRQAFASVALA 60

Query: 61  PFAFFLESQNASPLSYSSVCKIFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAIT 120
           P A FLE + A PLS    CKIF VSL GLT+SLNLYY+AIN TTATFAAATTN IPAIT
Sbjct: 61  PLAVFLERKKAPPLSNKLTCKIFFVSLCGLTVSLNLYYIAINSTTATFAAATTNIIPAIT 120

Query: 121 FVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYPEIQKQVSES 180
           F++A LLR+E+ISIK++HGIAKVLGSV+ VSGALVFAFVKGPPL+FL WY        + 
Sbjct: 121 FLMAVLLRMETISIKHVHGIAKVLGSVIGVSGALVFAFVKGPPLKFLRWYQTNPDHHIQE 180

Query: 181 SPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFW 240
           S T  C    WIKG+L+MISAN  WSLW VLQG I+KQYP+K+RLT LQCFF CIQSAFW
Sbjct: 181 SVTKGCCSKEWIKGSLLMISANILWSLWFVLQGPIVKQYPSKLRLTALQCFFCCIQSAFW 240

Query: 241 AVAAERNPSAWKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIIT 300
           A+A ERNPSAW+LGWD+HL++V YCGL + GI YW+QVW IEKKGPVF ++FTP ALIIT
Sbjct: 241 AIAVERNPSAWRLGWDVHLLAVAYCGLTVTGICYWVQVWTIEKKGPVFASMFTPLALIIT 300

Query: 301 AIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWGKNREERINKIVGNDNDEENPEGKEEIT 360
           AIFSAFLWKETLHWGSVGGA+LLVGGLY VLWGKN+E     +     +E   E KEEI 
Sbjct: 301 AIFSAFLWKETLHWGSVGGAILLVGGLYGVLWGKNKEGGKRSV----TNEGTAETKEEIM 356

Query: 361 MESTINNH 368
               I +H
Sbjct: 357 TLECITHH 364

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357497543|ref|XP_003619060.1| Auxin-induced protein 5NG4 [Medicago truncatula] gi|355494075|gb|AES75278.1| Auxin-induced protein 5NG4 [Medicago truncatula]

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 228/365 (62%), Positives = 285/365 (78%), Gaps = 6/365 (1%)

Query: 3   SLLCRNAFTASQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPF 62
           SLL         KPYIAM+F+QF YAGMAL SKAAI+KGM+P+VFVVYRQ FASLALSPF
Sbjct: 4   SLLGFMTILEKNKPYIAMLFIQFVYAGMALLSKAAISKGMSPYVFVVYRQIFASLALSPF 63

Query: 63  AFFLESQNASPLSYSSVCKIFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFV 122
           A+F +S++A+PLS + +CK+FLVSL GLT S NLYYVAINYT+ATFAAA+TNTIP+ITF+
Sbjct: 64  AYF-DSKHATPLSCNLLCKLFLVSLVGLTASSNLYYVAINYTSATFAAASTNTIPSITFI 122

Query: 123 LAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYPEIQKQVSESSP 182
           +A ++ +E+ISIKY+HG+AK+LGS++S+SGA+VFA VKGP + F+ W+ E Q   S S  
Sbjct: 123 MAVIIGVETISIKYMHGMAKILGSILSLSGAIVFALVKGPSIDFIRWHHENQNHNSHSF- 181

Query: 183 TNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAV 242
           T     G  IKG+L+M+SANT WSLWL+LQG+I+KQYPAK RLT +QCFFS IQS   A+
Sbjct: 182 TKIHSKGDNIKGSLMMLSANTGWSLWLILQGFIVKQYPAKFRLTIIQCFFSFIQSGILAI 241

Query: 243 AAERNPSAWKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAI 302
           A ERNPSAWKLGWD HL+SV YCG+++  I YW+QV  +E KGPVF A+FTP AL++TAI
Sbjct: 242 AMERNPSAWKLGWDFHLLSVAYCGIIVTAICYWLQVCTVETKGPVFTAMFTPLALVLTAI 301

Query: 303 FSAFLWKETLHWGSVGGAVLLVGGLYSVLWGKNREERINKIVGNDNDEENPEGKEEITME 362
           FSA  WKETL WGS+GG VLLV GLYSVLWGKN+E  I K    + + E+ + K    +E
Sbjct: 302 FSAIWWKETLFWGSIGGTVLLVLGLYSVLWGKNKEGVIVK----EENFEDGQAKAGTKLE 357

Query: 363 STINN 367
             I +
Sbjct: 358 CVIQS 362

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255638680|gb|ACU19645.1| unknown [Glycine max]

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 233/369 (63%), Positives = 286/369 (77%), Gaps = 6/369 (1%)

Query: 1   MKS-LLCRNAFTASQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLAL 59
           MKS LL R A     +PY+AM+F+QF YAGMAL SKAAI+KGM+P+VFVVYRQAFAS+AL
Sbjct: 1   MKSFLLWRVAIVEKNRPYVAMLFIQFVYAGMALLSKAAISKGMSPYVFVVYRQAFASVAL 60

Query: 60  SPFAFFLESQNASPLSYSSVCKIFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAI 119
           SPFAFF +S+  +PLS + +CK+FLVSL GLT S NLYYV+INYTTATFAAA TNT+PAI
Sbjct: 61  SPFAFF-DSKQPAPLSCNLLCKLFLVSLVGLTASSNLYYVSINYTTATFAAAATNTVPAI 119

Query: 120 TFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYPEIQKQVSE 179
           TF++A L+R+ESISIK +HG+AK+LGSV+S++GA+ FA VKGP L F+ WYPE Q   S 
Sbjct: 120 TFIMAVLIRMESISIKRVHGLAKILGSVLSLAGAITFALVKGPHLGFMKWYPENQNHSSH 179

Query: 180 SSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAF 239
                    G  I+G+L+M+S NTAWSLWL+LQG+++KQYPAK RLT +QC FS +QS  
Sbjct: 180 PLTIVHSK-GDTIRGSLLMLSGNTAWSLWLILQGFVVKQYPAKFRLTAIQCLFSFMQSTV 238

Query: 240 WAVAAER-NPSAWKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALI 298
            A A ER NPSAW+LGWDIHL+SV YCG+++ GI YW+QV  IE KGPVF A+FTP ALI
Sbjct: 239 VAAAVERNNPSAWRLGWDIHLLSVAYCGVIVTGICYWLQVCTIETKGPVFTAMFTPLALI 298

Query: 299 ITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWGKNREERINKIVGNDNDEENPEGKEE 358
           ITAIFSA LWKETL+ GSVGG VLLV GLYSVLWGK +E     + G + + E  E KEE
Sbjct: 299 ITAIFSALLWKETLYLGSVGGTVLLVVGLYSVLWGKIKESVKEGVKGENLEVE--ETKEE 356

Query: 359 ITMESTINN 367
             +E  + +
Sbjct: 357 PRLECIVQH 365

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356499546|ref|XP_003518600.1| PREDICTED: auxin-induced protein 5NG4-like [Glycine max]

 Score =  429 bits (1104), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 227/369 (61%), Positives = 286/369 (77%), Gaps = 10/369 (2%)

Query: 1   MKSLLCRNAFTASQ-KPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLAL 59
           MKS L     T  + +PY AM+F+QF YAGMAL SKAAI+KGM+P+VFVVYRQAFAS+AL
Sbjct: 1   MKSFLLGCVATVEKNRPYFAMLFIQFMYAGMALLSKAAISKGMSPYVFVVYRQAFASVAL 60

Query: 60  SPFAFFLESQNASPLSYSSVCKIFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAI 119
           SPFAFF +S+ ++PLS S +CK+FLVSL GLT S NLY V+INYT+ATFAAA TNT+PAI
Sbjct: 61  SPFAFF-DSKQSAPLSCSLLCKLFLVSLVGLTASSNLYCVSINYTSATFAAAATNTVPAI 119

Query: 120 TFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYPEIQKQVSE 179
           TF++A L+R+ESISIK +HG+AK+LGSV+S++GA+ FA VKGP L F+ WYPE Q   S 
Sbjct: 120 TFIMAALIRVESISIKRVHGLAKILGSVLSLAGAITFALVKGPSLGFMKWYPENQNHSSH 179

Query: 180 SSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAF 239
              T    +   ++G+L+M+SANTAWSLWL+LQG+++KQYPAK RLT +QC FS +QS  
Sbjct: 180 LLTTVHSKVDI-VRGSLMMLSANTAWSLWLILQGFVVKQYPAKFRLTAIQCLFSFMQSTV 238

Query: 240 WAVAAER-NPSAWKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALI 298
            AVA ER NPSAW+LGWDIHL+SV YCG+++ GI YW+QV  IE KGPVF A+FTP AL+
Sbjct: 239 VAVAVERNNPSAWRLGWDIHLLSVAYCGVIVTGICYWLQVCTIETKGPVFTAMFTPLALV 298

Query: 299 ITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWGKNREERINKIVGNDNDEENPEGKEE 358
           ITAIFSA LWKETL+ GSV G +LLV GLYSVLWGK+++      V  +N E   + KEE
Sbjct: 299 ITAIFSAILWKETLYLGSVAGTILLVVGLYSVLWGKSKDG-----VKGENLEAE-QTKEE 352

Query: 359 ITMESTINN 367
             +E  + +
Sbjct: 353 TRLECLVQH 361

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449446508|ref|XP_004141013.1| PREDICTED: auxin-induced protein 5NG4-like [Cucumis sativus] gi|449528227|ref|XP_004171107.1| PREDICTED: auxin-induced protein 5NG4-like [Cucumis sativus]

 Score =  413 bits (1062), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 225/372 (60%), Positives = 281/372 (75%), Gaps = 12/372 (3%)

Query: 1   MKSLLCRNAFTASQKPYIAMIFVQFAYAGMALFSKAAIA-KGMNPFVFVVYRQAFASLAL 59
           MKS +         KPYIAM+FVQ  Y+GMALFSKAAI+ KGMNP +FV YRQAFA++A+
Sbjct: 1   MKSFVGYVEAMRVHKPYIAMLFVQCVYSGMALFSKAAISQKGMNPAIFVFYRQAFATVAM 60

Query: 60  SPFAFFLESQNASPLSYSSVCKIFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAI 119
           +P AF  E +   PLS+    K+F+VSL G+TLSLNLYY+AIN+T+ATFAAATTNTIPAI
Sbjct: 61  APLAFLFERKKEVPLSFKFHSKVFVVSLIGVTLSLNLYYIAINHTSATFAAATTNTIPAI 120

Query: 120 TFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYPEIQKQVSE 179
           T +LA L R ESI I+ + G+AK++G+++  SGALVFAFVKGPP++F+NWYP+ +   + 
Sbjct: 121 TLLLALLFRYESICIRKVEGMAKLVGAIIGFSGALVFAFVKGPPMKFMNWYPQTKNITNS 180

Query: 180 SSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAF 239
             P +      WIKGA  M+SAN AWS WLVLQG I+K+YPAK+R+TTLQCFFS IQSA 
Sbjct: 181 FQPYSTL---EWIKGAFTMLSANIAWSFWLVLQGSIVKEYPAKLRITTLQCFFSLIQSAL 237

Query: 240 WAVAAERNPSAWKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALII 299
           WA+  ERNP AWKLGW++ L SV YCG+++ G+TYW+Q+W +EKKGPVF A+FTP ALII
Sbjct: 238 WALVMERNPQAWKLGWNLQLFSVAYCGVIVTGMTYWLQIWCVEKKGPVFTAMFTPLALII 297

Query: 300 TAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWGKNREERI---NKIVGNDNDEENPEGK 356
           TAIFSA LWKE+LHWGSVGG +LLV GLY VLWGK REE      KI+    DE+  + K
Sbjct: 298 TAIFSALLWKESLHWGSVGGGILLVLGLYFVLWGKKREEGAAAKAKII----DEQRHDTK 353

Query: 357 EEITMESTINNH 368
           +E  +E  I  H
Sbjct: 354 DETILEC-ITTH 364

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356559653|ref|XP_003548113.1| PREDICTED: auxin-induced protein 5NG4-like [Glycine max]

 Score =  404 bits (1037), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 224/370 (60%), Positives = 278/370 (75%), Gaps = 7/370 (1%)

Query: 1   MKS-LLCRNAFTASQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLAL 59
           MKS LL R A     +PY+AM+F+QF YAGMAL SKAAI+KGM+P+VFVVYRQAFAS+AL
Sbjct: 1   MKSFLLWRVAIVEKNRPYVAMLFIQFVYAGMALLSKAAISKGMSPYVFVVYRQAFASVAL 60

Query: 60  SPFAFFLESQNASPLSYSSVCKIFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAI 119
           SPFAFF +S+  +PLS + +CK+FLVSL GLT S NLYYV+INYTTATFAAA TNT+PAI
Sbjct: 61  SPFAFF-DSKQPAPLSCNLLCKLFLVSLVGLTASSNLYYVSINYTTATFAAAATNTVPAI 119

Query: 120 TFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYPEIQKQVSE 179
           TF++A L+R+ESISIK +HG+AK+LGSV+S++GA+ FA VKGP L F+ WYPE Q   S 
Sbjct: 120 TFIMAVLIRMESISIKRVHGLAKILGSVLSLAGAITFALVKGPHLGFMKWYPENQNHSSH 179

Query: 180 SSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAF 239
                    G  I+G+L+M+S NTAWSLWL+LQ YI +Q+P K  LT +QC F  + S  
Sbjct: 180 PLTIVHSK-GDTIRGSLLMLSGNTAWSLWLILQVYICRQHPTKFPLTAIQCVFIFMHSTV 238

Query: 240 WAVAAERN-PSAWKL-GWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFAL 297
            +VA ERN PS+ +L G DIHLVSV + G+++ GI YW+QV  IE KGPVF A+FTP AL
Sbjct: 239 VSVAIERNTPSSMRLDGIDIHLVSVTFIGVIVTGICYWLQVCTIETKGPVFTAMFTPLAL 298

Query: 298 IITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWGKNREERINKIVGNDNDEENPEGKE 357
           IITAIFSA LWKETL+ GSVGG VLLV GLYSVLWGK +E     + G + + E  E KE
Sbjct: 299 IITAIFSALLWKETLYLGSVGGTVLLVVGLYSVLWGKIKESVKEGVKGENLEVE--ETKE 356

Query: 358 EITMESTINN 367
           E  +E  + +
Sbjct: 357 EPRLECIVQH 366

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	368
TAIR|locus:2031144	343	UMAMIT22 "Usually multiple aci	0.894	0.959	0.420	3e-69
TAIR|locus:2176065	359	UMAMIT21 "AT5G64700" [Arabidop	0.885	0.908	0.362	1.5e-53
TAIR|locus:2169414	402	UMAMIT9 "Usually multiple acid	0.845	0.773	0.299	2e-40
TAIR|locus:2058460	394	UMAMIT11 "Usually multiple aci	0.777	0.725	0.288	2.4e-37
TAIR|locus:2201148	389	UMAMIT19 "Usually multiple aci	0.904	0.856	0.263	2.1e-36
TAIR|locus:2132447	384	UMAMIT20 "Usually multiple aci	0.801	0.768	0.282	4e-35
TAIR|locus:2194864	370	SIAR1 "Siliques Are Red 1" [Ar	0.801	0.797	0.267	1.1e-34
TAIR|locus:2039792	374	UMAMIT14 "AT2G39510" [Arabidop	0.934	0.919	0.261	1.7e-34
UNIPROTKB|Q6J163	410	Q6J163 "Auxin-induced protein	0.951	0.853	0.251	2.8e-34
TAIR|locus:2005689	389	WAT1 "Walls Are Thin 1" [Arabi	0.798	0.755	0.270	2e-33

TAIR|locus:2031144 UMAMIT22 "Usually multiple acids move in and out Transporters 22" [Arabidopsis thaliana (taxid:3702)]

 Score = 702 (252.2 bits), Expect = 3.0e-69, P = 3.0e-69
 Identities = 142/338 (42%), Positives = 191/338 (56%)

Query:    15 KPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQXXXXXXXXXXXXXXXXQNASPL 74
             K  +AM+FVQ  YAGM L SK AI++G NPFVFV YRQ                  +SPL
Sbjct:     6 KANMAMVFVQIVYAGMPLLSKVAISQGTNPFVFVFYRQAFAALALSPFAFFLESSKSSPL 65

Query:    75 SYSSVCKIFLVSLFGLTLSLNLYYVXXXXXXXXXXXXXXXXXXXXXXVLAGLLRIESISI 134
             S+  + KIF +SL GLTLSLNLYYV                      VLA L R+E++++
Sbjct:    66 SFILLLKIFFISLCGLTLSLNLYYVAIENTTATFAAATTNAIPSITFVLALLFRLETVTL 125

Query:   135 KYLHGIAKXXXXXXXXXXXXXXXXXKGPPLRFLNWYPEIQKQVSESSPTNDCPIGR-WIK 193
             K  HG+AK                 KGP L  +N Y       S + P    P  +  +K
Sbjct:   126 KKSHGVAKVTGSMVGMLGALVFAFVKGPSL--INHYN------SSTIPNGTVPSTKNSVK 177

Query:   194 GALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAWKL 253
             G++ M++ANT W LW+++Q  ++K+YPAK+RL  LQC FSCIQSA WAVA  RNPS WK+
Sbjct:   178 GSITMLAANTCWCLWIIMQSKVMKEYPAKLRLVALQCLFSCIQSAVWAVAVNRNPSVWKI 237

Query:   254 GWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLH 313
              + + L+S+ YCG+++ G+TYW+QVWAIEKKGPVF A++TP ALI+T I S+FL+KET +
Sbjct:   238 EFGLPLLSMAYCGIMVTGLTYWLQVWAIEKKGPVFTALYTPLALILTCIVSSFLFKETFY 297

Query:   314 XXXXXXXXXXXXXXXXXXXXKNREERINKIVGNDNDEE 351
                                 K +EE I +     + +E
Sbjct:   298 LGSVGGAVLLVCGLYLGLWGKTKEEEIQRYGEKQSQKE 335

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2176065 UMAMIT21 "AT5G64700" [Arabidopsis thaliana (taxid:3702)]

 Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
 Identities = 120/331 (36%), Positives = 172/331 (51%)

Query:    13 SQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQXXXXXXXXXXXXXXXXQNAS 72
             S+KPY+ +  +Q  Y  M L SKA    GMN FVFV YRQ                ++A 
Sbjct:     5 SKKPYLMVTIIQVIYTIMFLISKAVFNGGMNTFVFVFYRQAFATIFLAPLAFFFERKSAP 64

Query:    73 PLSYSSVCKIFLVSLFGLTLSLNLYYVXXXXXXXXXXXXXXXXXXXXXXVLAGLLRIESI 132
             PLS+ +  KIF++SLFG+TLSL+L  +                       LA L  +E +
Sbjct:    65 PLSFVTFIKIFMLSLFGVTLSLDLNGIALSYTSATLAAATTASLPAITFFLALLFGMERL 124

Query:   133 SIKYLHGIAKXXXXXXXXXXXXXXXXXKGPPLRFLNWYPEI---QKQVSESSPTN-DCPI 188
              +K + G AK                 KGP L+ L   P     Q+    ++P +     
Sbjct:   125 KVKSIQGTAKLVGITVCMGGVIILAIYKGPLLK-LPLCPHFYHGQEHPHRNNPGHVSGGS 183

Query:   189 GRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNP 248
               W+KG ++MI++N  W LWLVLQG ++K YP+K+  TTL C  S IQS   A+A ER+ 
Sbjct:   184 TSWLKGCVLMITSNILWGLWLVLQGRVLKVYPSKLYFTTLHCLLSSIQSFVIAIALERDI 243

Query:   249 SAWKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLW 308
             SAWKLGW++ LV+V+YCG ++ G+ Y++Q W IEK+GPVF+++FTP +L+ T + SA L 
Sbjct:   244 SAWKLGWNLRLVAVIYCGFIVTGVAYYLQSWVIEKRGPVFLSMFTPLSLLFTLLSSAILL 303

Query:   309 KETLHXXXXXXXXXXXXXXXXXXXXKNREER 339
              E +                     K+REE+
Sbjct:   304 CEIISLGSIVGGLLLIIGLYCVLWGKSREEK 334

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2169414 UMAMIT9 "Usually multiple acids move in and out Transporters 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
 Identities = 95/317 (29%), Positives = 155/317 (48%)

Query:     1 MKSLLCRNAFTASQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQXXXXXXXX 60
             M+ +    +F  S KPY AMI +QF YAGM + +K ++  GM+ +V VVYR         
Sbjct:     3 MEEISSCESFLTSSKPYFAMISLQFGYAGMNIITKISLNTGMSHYVLVVYRHAIATAVIA 62

Query:    61 XXXXXXXXQNASPLSYSSVCKIFLVSLFGLTLSLNLYYVXXXXXXXXXXXXXXXXXXXXX 120
                     +    +++S   ++F++ L G  +  N YY+                     
Sbjct:    63 PFAFFFERKAQPKITFSIFMQLFILGLLGPVIDQNFYYMGLKYTSPTFSCAMSNMLPAMT 122

Query:   121 XVLAGLLRIESISIKYLHGIAKXXXXXXXXXXXXXXXXXKGPPLRFLNW--YPEIQ--KQ 176
              +LA L R+E + +K L   AK                 KGP +  L W  Y  IQ    
Sbjct:   123 FILAVLFRMEMLDLKKLWCQAKIAGTVVTVAGAMLMTIYKGPIVE-LFWTKYMHIQDSSH 181

Query:   177 VSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPA-KVRLTTLQCFFSCI 235
              + +S  N      ++KG++++I A  AW+   VLQ  I+K Y   ++ LTTL CF   +
Sbjct:   182 ANTTSSKNSSSDKEFLKGSILLIFATLAWASLFVLQAKILKTYAKHQLSLTTLICFIGTL 241

Query:   236 QSAFWAVAAERNPSAWKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPF 295
             Q+       E NPSAW++GWD++L++  Y G+V + I+Y++Q   ++K+GPVF   F+P 
Sbjct:   242 QAVAVTFVMEHNPSAWRIGWDMNLLAAAYSGIVASSISYYVQGIVMKKRGPVFATAFSPL 301

Query:   296 ALIITAIFSAFLWKETL 312
              ++I A+  +F+  E +
Sbjct:   302 MMVIVAVMGSFVLAEKI 318

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2058460 UMAMIT11 "Usually multiple acids move in and out Transporters 11" [Arabidopsis thaliana (taxid:3702)]

 Score = 401 (146.2 bits), Expect = 2.4e-37, P = 2.4e-37
 Identities = 85/295 (28%), Positives = 147/295 (49%)

Query:    13 SQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQXXXXXXXXXXXXXXXXQNAS 72
             S KPY AM+ +QF YAGM L +K  + +GM+ +V V YR                 +  S
Sbjct:     8 SAKPYFAMVCLQFGYAGMNLVTKTVLDRGMSHYVLVAYRNAFATAAIAPFALLSERKVRS 67

Query:    73 PLSYSSVCKIFLVSLFGLTLSLNLYYVXXXXXXXXXXXXXXXXXXXXXXVLAGLLRIESI 132
              +++    +IFL++L G  +  NLYY+                      +LA L R+E +
Sbjct:    68 KMTFPIFMRIFLLALLGPVIDQNLYYIGLKLTSPTFSSAVSNIVPAITIILATLFRMEKV 127

Query:   133 SIKYLHGIAKXXXXXXXXXXXXXXXXXKGPPLRFLNWYPEIQKQVSESSPTNDCPIGRWI 192
              ++ +  + K                 KGP   F+N++       + S PT D     ++
Sbjct:   128 EMRKVRCLVKVMGTLVTVVGSILMIFYKGP---FINFFRS-HLTAASSPPTAD-----YL 178

Query:   193 KGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAWK 252
             K A+ ++ A+ +W+ + VLQ   +K+Y A + ++T+ CF   +QS   A   E NPSA  
Sbjct:   179 KAAVFLLLASLSWASFFVLQAATLKKYSAHLSMSTMVCFMGTLQSLALAFVMEHNPSALN 238

Query:   253 LGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFL 307
             +G+D++L++  Y G++ + I Y++Q   +++KGPVF+  F P  ++I +I S F+
Sbjct:   239 IGFDMNLLASAYAGIMSSSIAYYVQGLMMQRKGPVFVTAFNPLIVVIVSIMSFFV 293

GO:0005576 "extracellular region" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2201148 UMAMIT19 "Usually multiple acids move in and out Transporters 19" [Arabidopsis thaliana (taxid:3702)]

 Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
 Identities = 91/345 (26%), Positives = 155/345 (44%)

Query:    13 SQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQXXXXXXXXXXXXXXXXQNAS 72
             S KPY+AMI +QF YAGM + +  ++  GMN +V  VYR                 +   
Sbjct:     8 SLKPYLAMISMQFGYAGMYIITMVSLKHGMNHYVLAVYRHAIATAVIAPFALFHERKIRP 67

Query:    73 PLSYSSVCKIFLVSLFGLTLSLNLYYVXXXXXXXXXXXXXXXXXXXXXXVLAGLLRIESI 132
              +++    +I L+      L  NLYYV                      VLA + R+ES+
Sbjct:    68 KMTFRIFLQIALLGFIEPVLDQNLYYVGMTYTSATFASATANVLPAITFVLAIIFRLESV 127

Query:   133 SIKYLHGIAKXXXXXXXXXXXXXXXXXKGPPLRFLNWYPEIQKQVSESSPTNDCPIG--- 189
             + K +  IAK                 KGP + F+  +       S+ +  +    G   
Sbjct:   128 NFKKVRSIAKVVGTVITVSGALLMTLYKGPIVDFIR-FGGGGGGGSDGAGGSHGGAGAAA 186

Query:   190 ---RWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAER 246
                 WI G L+++     W+ + +LQ + +KQYPA++ LTTL C    ++    ++   R
Sbjct:   187 MDKHWIPGTLMLLGRTFGWAGFFILQSFTLKQYPAELSLTTLICLMGTLEGTAVSLVTVR 246

Query:   247 NPSAWKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAF 306
             + SAWK+G+D +L +  Y G++ +G+ Y++Q   + ++GPVF+A F P  ++ITA     
Sbjct:   247 DLSAWKIGFDSNLFAAAYSGVICSGVAYYVQGVVMRERGPVFVATFNPLCVVITAALGVV 306

Query:   307 LWKETLHXXXXXXXXXXXXXXXXXXXXKNREERINKIVGNDNDEE 351
             +  E++H                    K +++R+      D+DE+
Sbjct:   307 VLSESIHLGSVIGTLFIIVGLYTVVWGKGKDKRMT-----DDDED 346

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2132447 UMAMIT20 "Usually multiple acids move in and out Transporters 20" [Arabidopsis thaliana (taxid:3702)]

 Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
 Identities = 85/301 (28%), Positives = 140/301 (46%)

Query:    15 KPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQXXXXXXXXXXXXXXXXQNASPL 74
             +PY+ MIF+QF  AG  +   A + +G N +V +VYR                 +    +
Sbjct:    12 RPYLLMIFLQFGAAGTYIVIMATLNQGQNRYVVIVYRNLVAALVLAPFALIFERKVRPKM 71

Query:    75 SYSSVCKIFLVSLFGLTLSLNLYYVXXXXXXXXXXXXXXXXXXXXXXVLAGLLRIESISI 134
             + S + KI  +      L     Y+                      ++A +LR+E ++I
Sbjct:    72 TLSVLWKIMALGFLEPVLDQGFGYLGMNMTSATYTSAIMNILPSVTFIIAWILRMEKVNI 131

Query:   135 KYLHGIAKXXXXXXXXXXXXXXXXXKGP--PLRFLNWYPEIQKQVSESSPTNDCPIGRWI 192
               +   AK                 KGP  PL + N  P + +Q   ++ + D     W+
Sbjct:   132 AEVRSKAKIIGTLVGLGGALVMTLYKGPLIPLPWSN--PNMDQQNGHTNNSQDH--NNWV 187

Query:   193 KGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAWK 252
              G L+++    AWS + VLQ   IK YPA + L+ L C    +QS   A+  ER+PS W 
Sbjct:   188 VGTLLILLGCVAWSGFYVLQSITIKTYPADLSLSALICLAGAVQSFAVALVVERHPSGWA 247

Query:   253 LGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETL 312
             +GWD  L + +Y G+V +GITY++Q   ++ +GPVF+  F P  +I+ A+ ++F+  E +
Sbjct:   248 VGWDARLFAPLYTGIVSSGITYYVQGMVMKTRGPVFVTAFNPLCMILVALIASFILHEQI 307

Query:   313 H 313
             H
Sbjct:   308 H 308

GO:0005576 "extracellular region" evidence=ISM

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2194864 SIAR1 "Siliques Are Red 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
 Identities = 80/299 (26%), Positives = 139/299 (46%)

Query:    15 KPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQXXXXXXXXXXXXXXXXQNASPL 74
             KP +A+I +QF YAGM + +  +   GM+ +V   YR                 +    +
Sbjct:    10 KPILAIISLQFGYAGMYIITMVSFKHGMDHWVLATYRHVVATVVMAPFALMFERKIRPKM 69

Query:    75 SYSSVCKIFLVSLFGLTLSLNLYYVXXXXXXXXXXXXXXXXXXXXXXVLAGLLRIESISI 134
             + +   ++  + +    +  NLYY+                      +LA + R+E+++ 
Sbjct:    70 TLAIFWRLLALGILEPLMDQNLYYIGLKNTSASYTSAFTNALPAVTFILALIFRLETVNF 129

Query:   135 KYLHGIAKXXXXXXXXXXXXXXXXXKGPPLRFLNWYPEIQKQVSESSPTNDCPIGRWIKG 194
             + +H +AK                 KGP +  +          S S+PT       W+ G
Sbjct:   130 RKVHSVAKVVGTVITVGGAMIMTLYKGPAIEIVKAAHNSFHGGSSSTPTGQ----HWVLG 185

Query:   195 ALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAWKLG 254
              + ++ + + W+ + +LQ Y +K YPA++ L TL C    I +A  ++   R+PSAWK+G
Sbjct:   186 TIAIMGSISTWAAFFILQSYTLKVYPAELSLVTLICGIGTILNAIASLIMVRDPSAWKIG 245

Query:   255 WDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLH 313
              D   ++ VY G+V +GI Y+IQ   I+++GPVF   F+P  +IITA   A +  E +H
Sbjct:   246 MDSGTLAAVYSGVVCSGIAYYIQSIVIKQRGPVFTTSFSPMCMIITAFLGALVLAEKIH 304

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

GO:0005515 "protein binding" evidence=IPI

GO:0005886 "plasma membrane" evidence=IDA

GO:0006865 "amino acid transport" evidence=IDA

GO:0015171 "amino acid transmembrane transporter activity" evidence=IDA

GO:0032973 "amino acid export" evidence=IDA

GO:0034639 "L-amino acid efflux transmembrane transporter activity" evidence=IDA

GO:0043090 "amino acid import" evidence=IDA

GO:0080144 "amino acid homeostasis" evidence=IMP

TAIR|locus:2039792 UMAMIT14 "AT2G39510" [Arabidopsis thaliana (taxid:3702)]

 Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
 Identities = 93/355 (26%), Positives = 158/355 (44%)

Query:    15 KPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQXXXXXXXXXXXXXXXXQNASPL 74
             KP+I ++ +QF YAG+++ +K A+ +GM+P V   YR                 +    +
Sbjct:     7 KPFITVVSLQFGYAGLSIIAKFALNQGMSPHVLASYRHIVATIFIAPFAYFLDRKIRPKM 66

Query:    75 SYSSVCKIFLVSLFGLTLSLNLYYVXXXXXXXXXXXXXXXXXXXXXXVLAGLLRIESISI 134
             + S   KI L+ L   T+  NLYY                       ++A + R+E +++
Sbjct:    67 TLSIFFKILLLGLLEPTIDQNLYYTGMKYTSATFTAAMTNVLPAFAFIMAWIFRLEKVNV 126

Query:   135 KYLHGIAKXXXXXXXXXXXXXXXXXKGP--PLRFLNWYPEIQKQVSESSPTNDCPIGRWI 192
             K +H  AK                 KGP  PL + N + +I +  S +    D       
Sbjct:   127 KKIHSQAKILGTIVTVGGAMLMTVVKGPLIPLPWANPH-DIHQDSSNTGVKQDLT----- 180

Query:   193 KGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAER-NPSAW 251
             KGA ++      W+ ++ LQ   +K YP ++ LT   CF   I+S   A+  ER NPSAW
Sbjct:   181 KGASLIAIGCICWAGFINLQAITLKSYPVELSLTAYICFLGSIESTIVALFIERGNPSAW 240

Query:   252 KLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKET 311
              +  D  L++ VY G++ +GI Y++Q   ++ +GPVF+  F P +++I AI  + +  E 
Sbjct:   241 AIHLDSKLLAAVYGGVICSGIGYYVQGVIMKTRGPVFVTAFNPLSMVIVAILGSIILAEV 300

Query:   312 LHXXXXXXXXXXXXXXXXXXXXKNREERINKIVGNDNDEENPEGKEEITMESTIN 366
             +                     K+++E  +    +D D+E P    +I + S  N
Sbjct:   301 MFLGRILGAIVIVLGLYSVLWGKSKDEPSSSF--SDMDKELPLSTPQIVLPSKAN 353

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

UNIPROTKB|Q6J163 Q6J163 "Auxin-induced protein 5NG4" [Pinus taeda (taxid:3352)]

 Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
 Identities = 90/358 (25%), Positives = 157/358 (43%)

Query:     8 NAFTASQ-KPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQXXXXXXXXXXXXXX 66
             N F + + K + AM+ +QF YAG  + S+AA+  G++  VF VYR               
Sbjct:    10 NVFMSERVKLHAAMLALQFGYAGFHIVSRAALNMGVSKVVFPVYRNILALMLIGPCAYFL 69

Query:    67 XXQNASPLSYSSVCKIFLVSLFGLTLSLNLYYVXXXXXXXXXXXXXXXXXXXXXXVLAGL 126
               +    L+ S + + FL++L G+T    +  +                      ++A  
Sbjct:    70 EKKERPALTLSFLIQFFLLALCGITGQSRILSLRIVLHIPTFASAIQNSVPAITFIMAAA 129

Query:   127 LRIESISIKYLHGIAKXXXXXXXXXXXXXXXXXKGPPLRFLNWYPEIQKQVS--ESSPTN 184
             LR+E + I    G+AK                 KGPP+  + W P ++   S  ++   N
Sbjct:   130 LRLEKVHISRRDGLAKIIGTVACVSGATIITLYKGPPITHI-WRPNLEVTASYFKAFQGN 188

Query:   185 DCPIG--RWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAV 242
             D       W  G + ++    AWS W+VLQ  ++K+YPA++ +T+  CFF  IQ    A 
Sbjct:   189 DLSAKSENWTLGCIYLLGNCLAWSGWIVLQAPVLKRYPARLSVTSFTCFFGVIQFLIIAA 248

Query:   243 AAERNPSAWKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAI 302
               E +   WK+     L +++Y G V +GI + +Q+W I++ GPVF+A++ P   I  AI
Sbjct:   249 FFETDLEHWKIHSGGELFTILYAGFVASGIAFSVQIWCIDRGGPVFVAVYQPVQTIAVAI 308

Query:   303 FSAFLWKETLHXXXXXXXXXXXXXXXXXXXXKNREERINKIVGNDN--DEENPEGKEE 358
              ++ +  E  +                    K+ E+R+  +    +   E  P+  ++
Sbjct:   309 MASIILGEQFYLGGIFGAILIIIGLYLVLWGKSEEKRLGLLQAKSSMVPENQPDNMDQ 366

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=IDA

GO:0005887 "integral to plasma membrane" evidence=NAS

GO:0005938 "cell cortex" evidence=IDA

GO:0006810 "transport" evidence=NAS

GO:0009734 "auxin mediated signaling pathway" evidence=IDA

TAIR|locus:2005689 WAT1 "Walls Are Thin 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
 Identities = 82/303 (27%), Positives = 140/303 (46%)

Query:    17 YIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQXXXXXXXXXXXXXXXXQNASPLSY 76
             +IAM+ +QF YAG  + S+AA+  G++  VF VYR                 +    ++ 
Sbjct:    21 HIAMLTLQFGYAGFHVVSRAALNMGISKLVFPVYRNIIALLLLLPFAYFLEKKERPAITL 80

Query:    77 SSVCKIFLVSLFGLTLSLNLYYVXXXXXXXXXXXXXXXXXXXXXXVLAGLLRIESISIKY 136
             + + + F ++L G+T +   Y +                      ++A LLRIE + I  
Sbjct:    81 NFLIQFFFLALIGITANQGFYLLGLDNTSPTFASSMQNSVPAITFLMAALLRIEKVRINR 140

Query:   137 LHGIAKXXXXXXXXXXXXXXXXXKGP----PLRFLNWYPEIQKQVSESSPTNDCPIGRWI 192
               GI+K                 KGP    P   L+ +  +    +  +P  +     W 
Sbjct:   141 RDGISKILGTALCVAGASVITLYKGPTIYTPASHLHAHL-LTTNSAVLAPLGNAAPKNWT 199

Query:   193 KGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAWK 252
              G + +I    +WS WLV Q  ++K YPA++ +T+  CFF  IQ    A   ER+  AW 
Sbjct:   200 LGCIYLIGHCLSWSGWLVFQAPVLKSYPARLSVTSYTCFFGIIQFLIIAAFCERDSQAWV 259

Query:   253 L--GWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKE 310
                GW+  L +++Y G+V +GI + +Q+W I++ GPVF+A++ P   ++ AI ++    E
Sbjct:   260 FHSGWE--LFTILYAGIVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASIALGE 317

Query:   311 TLH 313
               +
Sbjct:   318 EFY 320

GO:0016020 "membrane" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0009705 "plant-type vacuole membrane" evidence=IDA

GO:0009826 "unidimensional cell growth" evidence=IMP

GO:0009834 "secondary cell wall biogenesis" evidence=IMP

GO:0090355 "positive regulation of auxin metabolic process" evidence=IMP

GO:0090358 "positive regulation of tryptophan metabolic process" evidence=IMP

GO:0000271 "polysaccharide biosynthetic process" evidence=RCA

GO:0006833 "water transport" evidence=RCA

GO:0007389 "pattern specification process" evidence=RCA

GO:0008361 "regulation of cell size" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=RCA

GO:0009926 "auxin polar transport" evidence=RCA

GO:0009932 "cell tip growth" evidence=RCA

GO:0010015 "root morphogenesis" evidence=RCA

GO:0010075 "regulation of meristem growth" evidence=RCA

GO:0010817 "regulation of hormone levels" evidence=RCA

GO:0040007 "growth" evidence=RCA

GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6NMB7	WTR7_ARATH	No assigned EC number	0.5947	0.9076	0.9737	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00031771001 SubName- Full=Chromosome chr18 scaffold_59, whole genome shotgun sequence; (353 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	368
PLN00411	358	PLN00411, PLN00411, nodulin MtN21 family protein;	3e-52
COG0697	292	COG0697, RhaT, Permeases of the drug/metabolite tr	9e-10
pfam00892	126	pfam00892, EamA, EamA-like transporter family	4e-09
pfam00892	126	pfam00892, EamA, EamA-like transporter family	5e-09
TIGR00950	260	TIGR00950, 2A78, Carboxylate/Amino Acid/Amine Tran	1e-05

>gnl|CDD|177805 PLN00411, PLN00411, nodulin MtN21 family protein; Provisional

 Score =  176 bits (448), Expect = 3e-52
 Identities = 106/337 (31%), Positives = 182/337 (54%), Gaps = 7/337 (2%)

Query: 19  AMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLE-SQNASPLSYS 77
           AM+  + +  G++   K A +KG+N + F+ Y    ASL L P  FF   S++  PLS S
Sbjct: 17  AMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVS 76

Query: 78  SVCKIFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYL 137
            + KI L+   G ++ +   Y+ I Y+  T A+A +N  PA+TF+LA + R+E +S K  
Sbjct: 77  ILSKIGLLGFLG-SMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKER 135

Query: 138 HGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYPEIQKQVSESSPTNDCPIGRWIKGALI 197
             +AKV+G+++S+ GALV  F  GP +   +  P +     + SP        W+ G  +
Sbjct: 136 SSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLN--FRQLSPPLSSSNSDWLIGGAL 193

Query: 198 MISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCF-FSCIQSAFWAVAAERNPSAWKLGWD 256
           +       S+  +LQ +I+ +YPA   ++ L     S + S    V  + NPS W + +D
Sbjct: 194 LTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFD 253

Query: 257 IHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGS 316
           I L+++V    +I  + Y I  W +  KGP+++AIF P +++I  +  A    ++L+ G 
Sbjct: 254 ITLITIVTMA-IITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGC 312

Query: 317 VGGAVLLVGGLYSVLWGKNREERINKIVGNDNDEENP 353
           + G +L+  G Y+V+WGK  EE+ ++++     E+ P
Sbjct: 313 LIGGILITLGFYAVMWGKANEEK-DQLLSFSGKEKTP 348

Length = 358

>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

 Score = 58.7 bits (142), Expect = 9e-10
 Identities = 57/322 (17%), Positives = 105/322 (32%), Gaps = 39/322 (12%)

Query: 17  YIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSY 76
            +A++     +    +  K A+            R   A+L L P            L  
Sbjct: 9   LLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLRPALRP 68

Query: 77  SSVCKIFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAG-LLRIESISIK 135
                + L++L GL L   L ++A+ YT+A+ A+     +P  T +LA  LL  E +S+ 
Sbjct: 69  --WLLLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLL 126

Query: 136 YLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYPEIQKQVSESSPTNDCPIGRWIKGA 195
            + GI   L  V+ +                                         + G 
Sbjct: 127 QILGILLALAGVLLILLGGGGGG------------------------------ILSLLGL 156

Query: 196 LIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAWKLGW 255
           L+ ++A   W+L+  L   + +  P       L                    +      
Sbjct: 157 LLALAAALLWALYTALVKRLSRLGPV---TLALLLQLLLALLLLLLFFLSGFGAPILSRA 213

Query: 256 DIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWG 315
               + ++Y G+   G+ Y +  +A+   G   +A+ +    +  A+    L  E L   
Sbjct: 214 ---WLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPA 270

Query: 316 SVGGAVLLVGGLYSVLWGKNRE 337
            + GA L+V G+        R 
Sbjct: 271 QLLGAALVVLGVLLASLRARRR 292

Length = 292

>gnl|CDD|216178 pfam00892, EamA, EamA-like transporter family

 Score = 53.8 bits (130), Expect = 4e-09
 Identities = 37/127 (29%), Positives = 65/127 (51%), Gaps = 2/127 (1%)

Query: 25  FAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFL 84
            ++A   +FSK  + + ++P  F  YR   A + L     FL  +  + LS  ++  +  
Sbjct: 1   LSWALYFVFSKKLLER-ISPLTFTAYRFLIAGILL-ILLLFLLRKPFALLSLKAILALLY 58

Query: 85  VSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVL 144
           + LFG  L   LY+ A+ Y +A+ A+  T+  P  T +L+ LL  E +++K L GI  +L
Sbjct: 59  LGLFGTALGYLLYFYALKYVSASNASVITSLSPVFTLILSVLLLGEKLTLKQLLGIVLIL 118

Query: 145 GSVVSVS 151
             V+ + 
Sbjct: 119 LGVLLIL 125

This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Length = 126

>gnl|CDD|216178 pfam00892, EamA, EamA-like transporter family

 Score = 53.4 bits (129), Expect = 5e-09
 Identities = 23/129 (17%), Positives = 54/129 (41%), Gaps = 4/129 (3%)

Query: 204 AWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAWKLGWDIHLVSVV 263
           +W+L+ V    ++++    +  T  +   + I          +  +   L     +++++
Sbjct: 2   SWALYFVFSKKLLERISP-LTFTAYRFLIAGILLILLLFLLRKPFALLSLKA---ILALL 57

Query: 264 YCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLL 323
           Y GL    + Y +  +A++       ++ T  + + T I S  L  E L    + G VL+
Sbjct: 58  YLGLFGTALGYLLYFYALKYVSASNASVITSLSPVFTLILSVLLLGEKLTLKQLLGIVLI 117

Query: 324 VGGLYSVLW 332
           + G+  +L 
Sbjct: 118 LLGVLLILL 126

This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Length = 126

>gnl|CDD|233205 TIGR00950, 2A78, Carboxylate/Amino Acid/Amine Transporter

 Score = 45.8 bits (109), Expect = 1e-05
 Identities = 48/281 (17%), Positives = 94/281 (33%), Gaps = 44/281 (15%)

Query: 48  VVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTLSLNLYYVAINYTTAT 107
           V  R  FA L L P                 + ++ L+    + +   LY+VA+      
Sbjct: 22  VFRRLIFALLLLLPLLR-------RRPPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVG 74

Query: 108 FAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFL 167
            AA      P    +L+ L+  E      L      L +V+ ++GA     +    L   
Sbjct: 75  EAALLLYLAPLYVTLLSDLMGKERPRKLVL------LAAVLGLAGA--VLLLSDGNLSIN 126

Query: 168 NWYPEIQKQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAK-VRLT 226
                                     G L+ + +  +++L  VL   ++K+   + ++ T
Sbjct: 127 PA------------------------GLLLGLGSGISFALGTVLYKRLVKKEGPELLQFT 162

Query: 227 TLQCFFSCIQSAFWAVAAERNPSAWKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGP 286
                   +    +A     NP A  L W      ++Y GL+   + Y++    +    P
Sbjct: 163 GWVLLLGALLLLPFAWFLGPNPQALSLQWGA----LLYLGLIGTALAYFLWNKGLTLVDP 218

Query: 287 VFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGL 327
              +I      ++  +    +  ETL    + G  L++  +
Sbjct: 219 SAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259

[Transport and binding proteins, Amino acids, peptides and amines]. Length = 260

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	368
PLN00411	358	nodulin MtN21 family protein; Provisional	100.0
PRK11272	292	putative DMT superfamily transporter inner membran	100.0
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	100.0
PRK11689	295	aromatic amino acid exporter; Provisional	100.0
PRK15430	296	putative chloramphenical resistance permease RarD;	100.0
PRK10532	293	threonine and homoserine efflux system; Provisiona	100.0
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.98
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.97
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.96
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.96
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.95
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.95
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.93
COG2962	293	RarD Predicted permeases [General function predict	99.91
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.91
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.9
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.89
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.86
KOG2765	416	consensus Predicted membrane protein [Function unk	99.79
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.75
KOG1580	337	consensus UDP-galactose transporter related protei	99.7
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.68
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.68
COG2510	140	Predicted membrane protein [Function unknown]	99.65
KOG2766	336	consensus Predicted membrane protein [Function unk	99.62
KOG1581	327	consensus UDP-galactose transporter related protei	99.62
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.62
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.59
COG2510	140	Predicted membrane protein [Function unknown]	99.59
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.54
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.44
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.42
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	99.39
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.39
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.32
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.29
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	99.23
PF13536	113	EmrE: Multidrug resistance efflux transporter	99.22
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.18
KOG1582	367	consensus UDP-galactose transporter related protei	99.17
PRK11272	292	putative DMT superfamily transporter inner membran	99.13
PRK15430	296	putative chloramphenical resistance permease RarD;	99.13
PRK13499	345	rhamnose-proton symporter; Provisional	99.11
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.08
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	99.08
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.05
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.05
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	99.03
PRK11689	295	aromatic amino acid exporter; Provisional	99.03
PLN00411	358	nodulin MtN21 family protein; Provisional	99.02
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	98.98
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.95
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.89
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.86
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.79
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.67
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.66
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.62
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	98.59
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.58
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.54
COG2962	293	RarD Predicted permeases [General function predict	98.53
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	98.5
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.46
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.45
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	98.28
KOG2922	335	consensus Uncharacterized conserved protein [Funct	98.21
KOG4510	346	consensus Permease of the drug/metabolite transpor	98.09
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.94
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.91
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	97.91
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.88
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	97.73
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	97.72
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	97.66
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	97.65
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.64
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.52
COG2076	106	EmrE Membrane transporters of cations and cationic	97.48
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.48
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.43
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	97.38
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.35
COG2076	106	EmrE Membrane transporters of cations and cationic	97.34
PRK11431	105	multidrug efflux system protein; Provisional	97.26
PRK11431	105	multidrug efflux system protein; Provisional	97.24
PRK13499	345	rhamnose-proton symporter; Provisional	97.16
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.15
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	97.05
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	96.92
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	96.82
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.8
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.74
KOG2765	416	consensus Predicted membrane protein [Function unk	96.72
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	96.51
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	96.32
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	96.31
KOG1581	327	consensus UDP-galactose transporter related protei	96.03
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	95.5
KOG2922	335	consensus Uncharacterized conserved protein [Funct	95.42
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	95.4
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	94.68
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	94.0
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	93.86
KOG4831	125	consensus Unnamed protein [Function unknown]	93.04
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	92.87
KOG1580	337	consensus UDP-galactose transporter related protei	92.59
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	91.97
KOG1443	349	consensus Predicted integral membrane protein [Fun	90.11
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	86.98
PF07168	336	Ureide_permease: Ureide permease; InterPro: IPR009	85.7
PRK02237	109	hypothetical protein; Provisional	83.64
PF06609	599	TRI12: Fungal trichothecene efflux pump (TRI12); I	81.84
KOG3912	372	consensus Predicted integral membrane protein [Gen	81.66
PRK06638	198	NADH:ubiquinone oxidoreductase subunit J; Provisio	81.11

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=100.00  E-value=3.4e-38  Score=294.55  Aligned_cols=322  Identities=30%  Similarity=0.566  Sum_probs=253.7

Q ss_pred             hhhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhc-cCCCCCCHHHHHHHHHHHHH
Q 017672           10 FTASQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLES-QNASPLSYSSVCKIFLVSLF   88 (368)
Q Consensus        10 ~~~~~~~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~   88 (368)
                      +.|..++++.+++..+..+...++.|.+.+.|++|..+.++|+.++.++++++.+.+++ +.+++.+++++.++.+.|++
T Consensus         8 ~~~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~   87 (358)
T PLN00411          8 WRREAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFL   87 (358)
T ss_pred             hhhccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHH
Confidence            34678899999999999999999999999999999999999999999999998876554 33344457888899999998


Q ss_pred             HHHHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHH------hcccccccccccccchhhHHHhHHhHHHHhhhcCC
Q 017672           89 GLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLL------RIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGP  162 (368)
Q Consensus        89 ~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~------~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~  162 (368)
                      + ..++.+++.|++|+++++++++.++.|+++.++++++      +|||++++      +++|++++++|+.++...+++
T Consensus        88 g-~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~------~~~G~~l~~~Gv~ll~~~~g~  160 (358)
T PLN00411         88 G-SMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVA------KVMGTILSLIGALVVIFYHGP  160 (358)
T ss_pred             H-HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHH------HHHHHHHHHHHHHHHHHccCc
Confidence            8 5677799999999999999999999999999999999      47777777      999999999999998764332


Q ss_pred             CCCCCC---CChhhhhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHH
Q 017672          163 PLRFLN---WYPEIQKQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAF  239 (368)
Q Consensus       163 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (368)
                      .....+   ..+.+++     .........+...|++++++++++||+|.+.+|+..++++++...++++..++.+...+
T Consensus       161 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~  235 (358)
T PLN00411        161 RVFVASSPPYLNFRQL-----SPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSM  235 (358)
T ss_pred             cccccccccccccccc-----ccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHH
Confidence            110000   0000000     00000122344679999999999999999999999999877556677777777777666


Q ss_pred             HHHHhhcC-CCcccccchhhHHHHHHHHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHh
Q 017672          240 WAVAAERN-PSAWKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVG  318 (368)
Q Consensus       240 ~~~~~~~~-~~~~~~~~~~~~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~  318 (368)
                      .....++. ...|....+.....+++.+++ +.++|.+|++++++.+|+++++..+++|+++++++++++||++++.+++
T Consensus       236 ~~l~~~~~~~~~~~~~~~~~~~~i~y~~i~-t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~i  314 (358)
T PLN00411        236 IGLVVEKNNPSVWIIHFDITLITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLI  314 (358)
T ss_pred             HHHHHccCCcccceeccchHHHHHHHHHHH-HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHH
Confidence            66555432 233332233345567777775 5689999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhccccccchhcccc
Q 017672          319 GAVLLVGGLYSVLWGKNREERINKIV  344 (368)
Q Consensus       319 G~~lii~gi~~~~~~~~~~~~~~~~~  344 (368)
                      |+++|+.|+++..+.+++|.+++.+.
T Consensus       315 G~~LIl~Gv~l~~~~~~~~~~~~~~~  340 (358)
T PLN00411        315 GGILITLGFYAVMWGKANEEKDQLLS  340 (358)
T ss_pred             HHHHHHHHHHHHHhhhhhhhhhcccC
Confidence            99999999999998776665544444

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=100.00  E-value=8.6e-33  Score=253.95  Aligned_cols=283  Identities=14%  Similarity=0.124  Sum_probs=234.7

Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHH
Q 017672           12 ASQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLT   91 (368)
Q Consensus        12 ~~~~~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   91 (368)
                      +-..-++..++..++||.++++.|...++ ++|.+++++|+.+++++++++...++++ .  .+++++......|.++..
T Consensus         5 ~~~~~~~~~~~~~~iWg~~~~~~K~~~~~-~~p~~~~~~R~~~a~l~ll~~~~~~~~~-~--~~~~~~~~~~~~g~~~~~   80 (292)
T PRK11272          5 QLLPLFGALFALYIIWGSTYLVIRIGVES-WPPLMMAGVRFLIAGILLLAFLLLRGHP-L--PTLRQWLNAALIGLLLLA   80 (292)
T ss_pred             HHHHHHHHHHHHHHHHhhHHHHHHHHhcc-CCHHHHHHHHHHHHHHHHHHHHHHhCCC-C--CcHHHHHHHHHHHHHHHH
Confidence            34445677788899999999999999886 9999999999999999998887654322 2  246778888888888777


Q ss_pred             HHHHHHHHhc-cccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCCCC
Q 017672           92 LSLNLYYVAI-NYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWY  170 (368)
Q Consensus        92 ~~~~~~~~al-~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~~~  170 (368)
                      .++.+++.+. ++++++.++++.++.|+++.+++.+ +|||++++      +++|++++++|+.++... ++        
T Consensus        81 ~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~------~~~~~~la~~Gv~ll~~~-~~--------  144 (292)
T PRK11272         81 VGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKL------EWLGIAIGLAGIVLLNSG-GN--------  144 (292)
T ss_pred             HHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchh------HHHHHHHHHHhHHHHhcC-cc--------
Confidence            7788889999 9999999999999999999999986 69999999      999999999999988531 10        


Q ss_pred             hhhhhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCCCc
Q 017672          171 PEIQKQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSA  250 (368)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (368)
                                      . +....|++++++++++||.|.+..|+..++ ++ ...+.+++..+.+...+.....+.+.. 
T Consensus       145 ----------------~-~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-  204 (292)
T PRK11272        145 ----------------L-SGNPWGAILILIASASWAFGSVWSSRLPLP-VG-MMAGAAEMLAAGVVLLIASLLSGERLT-  204 (292)
T ss_pred             ----------------c-ccchHHHHHHHHHHHHHHHHHHHHHhcCCC-cc-hHHHHHHHHHHHHHHHHHHHHcCCccc-
Confidence                            1 123579999999999999999999997543 33 556778888888877776644332211 


Q ss_pred             ccccchhhHHHHHHHHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHh
Q 017672          251 WKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSV  330 (368)
Q Consensus       251 ~~~~~~~~~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~  330 (368)
                       ...+...|..+++.+++++++++.+|++++++.++++++.+.+++|+++++++++++||++++.+++|+++++.|+++.
T Consensus       205 -~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~  283 (292)
T PRK11272        205 -ALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLV  283 (292)
T ss_pred             -ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHH
Confidence             1123467889999999999999999999999999999999999999999999999999999999999999999999988


Q ss_pred             hcccc
Q 017672          331 LWGKN  335 (368)
Q Consensus       331 ~~~~~  335 (368)
                      .+.++
T Consensus       284 ~~~~~  288 (292)
T PRK11272        284 TLGKY  288 (292)
T ss_pred             HHHHh
Confidence            76444

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=100.00  E-value=4.1e-32  Score=250.30  Aligned_cols=279  Identities=16%  Similarity=0.168  Sum_probs=216.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017672           17 YIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTLSLNL   96 (368)
Q Consensus        17 ~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~   96 (368)
                      .+++++++++||.++++.|...++ ++|..+.++|+.++++.++++..   +++.   +++   .....|++.....+.+
T Consensus         6 ~l~~l~~~~~Wg~~~~~~k~~~~~-~~p~~~~~~R~~~a~~~l~~~~~---~~~~---~~~---~~~~~g~~~~~~~~~~   75 (299)
T PRK11453          6 GVLALLVVVVWGLNFVVIKVGLHN-MPPLMLAGLRFMLVAFPAIFFVA---RPKV---PLN---LLLGYGLTISFGQFAF   75 (299)
T ss_pred             HHHHHHHHHHHhhhHHHHHHHHhc-CCHHHHHHHHHHHHHHHHHHHhc---CCCC---chH---HHHHHHHHHHHHHHHH
Confidence            467889999999999999999986 99999999999998776665432   1111   122   3344455444556667


Q ss_pred             HHHhccc-cChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCCCChhhhh
Q 017672           97 YYVAINY-TTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYPEIQK  175 (368)
Q Consensus        97 ~~~al~~-~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~~~~~~~~  175 (368)
                      ++.+++| .+++.++++.++.|+++.+++++++|||++++      ++++++++++|+.++... +.+            
T Consensus        76 ~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~------~~~~~~l~~~Gv~ll~~~-~~~------------  136 (299)
T PRK11453         76 LFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGK------QLAGIALAIFGVLVLIED-SLN------------  136 (299)
T ss_pred             HHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHH------HHHHHHHHHHhHHHhccc-cCC------------
Confidence            7889988 58899999999999999999999999999999      999999999999998741 100            


Q ss_pred             cccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcc--hhHHHHHHHHHHHHHHHHHHhhcCC---Cc
Q 017672          176 QVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKV--RLTTLQCFFSCIQSAFWAVAAERNP---SA  250 (368)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~---~~  250 (368)
                                 .......|+++++.++++|++|.+.+|+..++.+++.  ....+....+.+.........+++.   ..
T Consensus       137 -----------~~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (299)
T PRK11453        137 -----------GQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHS  205 (299)
T ss_pred             -----------CcchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhh
Confidence                       1122347999999999999999999999866544322  2333444444333333332333221   11


Q ss_pred             ccccchhhHHHHHHHHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHh
Q 017672          251 WKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSV  330 (368)
Q Consensus       251 ~~~~~~~~~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~  330 (368)
                      +...+...|..+++.++++++++|.+|++++++.++.+++.+.+++|+++.+++++++||++++.+++|++++++|+++.
T Consensus       206 ~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~  285 (299)
T PRK11453        206 LVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYIN  285 (299)
T ss_pred             hccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHH
Confidence            12223457889999999999999999999999999999999999999999999999999999999999999999999988


Q ss_pred             hcccc
Q 017672          331 LWGKN  335 (368)
Q Consensus       331 ~~~~~  335 (368)
                      .+.++
T Consensus       286 ~~~~~  290 (299)
T PRK11453        286 VFGLR  290 (299)
T ss_pred             hcchh
Confidence            77664

>PRK11689 aromatic amino acid exporter; Provisional

Probab=100.00  E-value=1.2e-31  Score=246.53  Aligned_cols=285  Identities=12%  Similarity=0.071  Sum_probs=214.7

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHHH
Q 017672           13 SQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTL   92 (368)
Q Consensus        13 ~~~~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   92 (368)
                      +.+++++++++.++||.+++..|.+.++ ++|..+.++|+.++.++++++..   +++.+    +..++..+.+.+....
T Consensus         2 ~~~~~l~~l~a~~~Wg~~~~~~k~~~~~-~~P~~~~~~R~~~a~l~l~~~~~---~~~~~----~~~~~~~~~~~l~~~~   73 (295)
T PRK11689          2 SQKATLIGLIAILLWSTMVGLIRGVSES-LGPVGGAAMIYSVSGLLLLLTVG---FPRLR----QFPKRYLLAGGLLFVS   73 (295)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHHcc-CChHHHHHHHHHHHHHHHHHHcc---ccccc----cccHHHHHHHhHHHHH
Confidence            4577889999999999999999999997 99999999999999998887531   11111    1122334455566677


Q ss_pred             HHHHHHHhccc----cChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCC
Q 017672           93 SLNLYYVAINY----TTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLN  168 (368)
Q Consensus        93 ~~~~~~~al~~----~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~  168 (368)
                      ++.+++.++++    +++++++++.++.|+++.+++++++|||++++      +++|++++++|+.++... ++....  
T Consensus        74 ~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~------~~~g~~l~~~Gv~li~~~-~~~~~~--  144 (295)
T PRK11689         74 YEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWL------LIPGLLLALAGVAWVLGG-DNGLSL--  144 (295)
T ss_pred             HHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHH------HHHHHHHHHHhHhheecC-Cccchh--
Confidence            77777777754    57788899999999999999999999999999      999999999999998742 110000  


Q ss_pred             CChhhhhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCC
Q 017672          169 WYPEIQKQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNP  248 (368)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (368)
                                   +...........|++++++++++||.|.+..||..++.++ ....   ...+.+.+.+.... +++.
T Consensus       145 -------------~~~~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~~~-~~~~---~~~~~~~l~~~~~~-~~~~  206 (295)
T PRK11689        145 -------------AELINNIASNPLSYGLAFIGAFIWAAYCNVTRKYARGKNG-ITLF---FILTALALWIKYFL-SPQP  206 (295)
T ss_pred             -------------hhhhhccccChHHHHHHHHHHHHHHHHHHHHhhccCCCCc-hhHH---HHHHHHHHHHHHHH-hcCc
Confidence                         0000011123469999999999999999999998766543 4432   22233333332222 2221


Q ss_pred             CcccccchhhHHHHHHHHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHH
Q 017672          249 SAWKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLY  328 (368)
Q Consensus       249 ~~~~~~~~~~~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~  328 (368)
                       .. ..+...|..+++.+ ++++++|.+|++++|+.++++++.+.+++|+++++++++++||++++.+++|+++|+.|++
T Consensus       207 -~~-~~~~~~~~~l~~~~-~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~  283 (295)
T PRK11689        207 -AM-VFSLPAIIKLLLAA-AAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSL  283 (295)
T ss_pred             -cc-cCCHHHHHHHHHHH-HHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHH
Confidence             11 12234577777777 4789999999999999999999999999999999999999999999999999999999988


Q ss_pred             Hhhcccc
Q 017672          329 SVLWGKN  335 (368)
Q Consensus       329 ~~~~~~~  335 (368)
                      +..+.++
T Consensus       284 ~~~~~~~  290 (295)
T PRK11689        284 LCWLATR  290 (295)
T ss_pred             HHhhhHh
Confidence            8765443

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=100.00  E-value=2.1e-31  Score=245.13  Aligned_cols=282  Identities=10%  Similarity=0.042  Sum_probs=210.2

Q ss_pred             hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccCC--CC-CCHHHHHHHHH
Q 017672            8 NAFTASQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNA--SP-LSYSSVCKIFL   84 (368)
Q Consensus         8 ~~~~~~~~~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~--~~-~~~~~~~~~~~   84 (368)
                      |+++++.+|++++++++++||.++++.|.. ++ ++|.++.++|++++.+++.++...++++..  ++ .+++.+. ...
T Consensus         1 ~~~~~~~~g~~~~l~a~~~wg~~~~~~k~~-~~-~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~   77 (296)
T PRK15430          1 MDAKQTRQGVLLALAAYFIWGIAPAYFKLI-YY-VPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIF-MLA   77 (296)
T ss_pred             CCchhhhhHHHHHHHHHHHHHHHHHHHHHh-cC-CCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHH-HHH
Confidence            567788999999999999999999999975 54 999999999999999888776644322100  00 1233332 344


Q ss_pred             HHHHHHHHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCC
Q 017672           85 VSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPL  164 (368)
Q Consensus        85 ~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~  164 (368)
                      .+.++...++.++++|++++++++++++.++.|+++.+++++++|||++++      +++|++++++|+.++...++   
T Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~------~~~g~~l~~~Gv~li~~~~~---  148 (296)
T PRK15430         78 VSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRM------QWLAVILAICGVLVQLWTFG---  148 (296)
T ss_pred             HHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHH------HHHHHHHHHHHHHHHHHHcC---
Confidence            667777888999999999999999999999999999999999999999999      99999999999999864211   


Q ss_pred             CCCCCChhhhhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCC-cchhHHHHHHHHHHHHHHHHHH
Q 017672          165 RFLNWYPEIQKQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPA-KVRLTTLQCFFSCIQSAFWAVA  243 (368)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  243 (368)
                                            + .     ..++++++++||.|.+..|+..++... ....+.+....+.....+.   
T Consensus       149 ----------------------~-~-----~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  197 (296)
T PRK15430        149 ----------------------S-L-----PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAI---  197 (296)
T ss_pred             ----------------------C-c-----cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHH---
Confidence                                  1 1     146788999999999999886432111 1122233333333222111   


Q ss_pred             hhcCCCcccccchhhHHHHHHHHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHH
Q 017672          244 AERNPSAWKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLL  323 (368)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~li  323 (368)
                      .+.....+...+...+..+++.++ .+.++|.++++++++.++++++.+.+++|+++.+++++++||++++.+++|+++|
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~g~-~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI  276 (296)
T PRK15430        198 ADSSTSHMGQNPMSLNLLLIAAGI-VTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFI  276 (296)
T ss_pred             ccCCcccccCCcHHHHHHHHHHHH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence            111111111111112233333444 6779999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhcc
Q 017672          324 VGGLYSVLWG  333 (368)
Q Consensus       324 i~gi~~~~~~  333 (368)
                      +.|+.+....
T Consensus       277 ~~~~~v~~~~  286 (296)
T PRK15430        277 WVALAIFVMD  286 (296)
T ss_pred             HHHHHHHHHH
Confidence            9887766543

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=100.00  E-value=6.7e-31  Score=241.46  Aligned_cols=279  Identities=11%  Similarity=0.082  Sum_probs=221.0

Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHH
Q 017672           11 TASQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGL   90 (368)
Q Consensus        11 ~~~~~~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   90 (368)
                      .++.+++.+++++.++|+.++.+.|.+.++ ++|..+.++|++++.++++++...++ +   +.+++++...+..|.+. 
T Consensus         8 ~~~~~~~~~~~la~~~~~~~~~~~K~~~~~-~~~~~~~~~R~~~a~l~l~~~~~~~~-~---~~~~~~~~~~~~~g~~~-   81 (293)
T PRK10532          8 LPVWLPILLLLIAMASIQSGASLAKSLFPL-VGAPGVTALRLALGTLILIAIFKPWR-L---RFAKEQRLPLLFYGVSL-   81 (293)
T ss_pred             cccchHHHHHHHHHHHHHhhHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHhHHh-c---cCCHHHHHHHHHHHHHH-
Confidence            456789999999999999999999999997 99999999999999998887653221 1   22467777777888764 


Q ss_pred             HHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCCCC
Q 017672           91 TLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWY  170 (368)
Q Consensus        91 ~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~~~  170 (368)
                      ...+.+++++++|+|++.++++.++.|+++.+++.    ||..        +..++.++++|+.++... +.+       
T Consensus        82 ~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~--------~~~~~~i~~~Gv~li~~~-~~~-------  141 (293)
T PRK10532         82 GGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPV--------DFVWVVLAVLGLWFLLPL-GQD-------  141 (293)
T ss_pred             HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChH--------HHHHHHHHHHHHheeeec-CCC-------
Confidence            66677899999999999999999999999988763    4432        345567889999887531 110       


Q ss_pred             hhhhhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCCCc
Q 017672          171 PEIQKQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSA  250 (368)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (368)
                                      ..+....|++++++++++||+|.+..|+..++.++ ... .+....+.+...+.....+.. . 
T Consensus       142 ----------------~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~~~-~~~-~~~~~~~~~~l~~~~~~~~~~-~-  201 (293)
T PRK10532        142 ----------------VSHVDLTGAALALGAGACWAIYILSGQRAGAEHGP-ATV-AIGSLIAALIFVPIGALQAGE-A-  201 (293)
T ss_pred             ----------------cccCChHHHHHHHHHHHHHHHHHHHHHHHhccCCc-hHH-HHHHHHHHHHHHHHHHHccCc-c-
Confidence                            11223579999999999999999999998777654 554 455566666666655433221 1 


Q ss_pred             ccccchhhHHHHHHHHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHh
Q 017672          251 WKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSV  330 (368)
Q Consensus       251 ~~~~~~~~~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~  330 (368)
                        ..+...|..++++|+++++++|.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++|++|++..
T Consensus       202 --~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~  279 (293)
T PRK10532        202 --LWHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGS  279 (293)
T ss_pred             --cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHH
Confidence              112234556789999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             hcccccc
Q 017672          331 LWGKNRE  337 (368)
Q Consensus       331 ~~~~~~~  337 (368)
                      .+..+++
T Consensus       280 ~~~~~~~  286 (293)
T PRK10532        280 TLTIRRE  286 (293)
T ss_pred             HhcCCCC
Confidence            7665443

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.98  E-value=1.1e-30  Score=236.40  Aligned_cols=258  Identities=17%  Similarity=0.244  Sum_probs=219.6

Q ss_pred             HHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccCh
Q 017672           27 YAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTLSLNLYYVAINYTTA  106 (368)
Q Consensus        27 ~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~  106 (368)
                      ||.+++..|...+++.++....+.|++.+.+++.++...+       .+++++.+....|.++..+++.+++.|++|+++
T Consensus         1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~   73 (260)
T TIGR00950         1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR-------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPV   73 (260)
T ss_pred             CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc-------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence            8999999999887668999999999999988887765432       235677788889989889999999999999999


Q ss_pred             hhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCCCChhhhhcccCCCCCCCC
Q 017672          107 TFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYPEIQKQVSESSPTNDC  186 (368)
Q Consensus       107 ~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (368)
                      ++++++.++.|+++.+++.+++|||++++      +++|+.++++|++++.. ++                         
T Consensus        74 ~~~~ii~~~~P~~~~~~~~l~~~e~~~~~------~~~gi~i~~~Gv~li~~-~~-------------------------  121 (260)
T TIGR00950        74 GEAALLLYLAPLYVTLLSDLMGKERPRKL------VLLAAVLGLAGAVLLLS-DG-------------------------  121 (260)
T ss_pred             hhhHHHHhhhHHHHHHHHHHHccCCCcHH------HHHHHHHHHHhHHhhcc-CC-------------------------
Confidence            99999999999999999999999999999      99999999999999863 11                         


Q ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCC-cchhHHHHHHHHHHHHHHHHHHhhcCCCcccccchhhHHHHHHH
Q 017672          187 PIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPA-KVRLTTLQCFFSCIQSAFWAVAAERNPSAWKLGWDIHLVSVVYC  265 (368)
Q Consensus       187 ~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  265 (368)
                      ..+....|++++++++++|+.+.+..|+..++.++ +.....+++..+.+...+.....+++. .   .+...|..+++.
T Consensus       122 ~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~---~~~~~~~~~~~~  197 (260)
T TIGR00950       122 NLSINPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP-Q---ALSLQWGALLYL  197 (260)
T ss_pred             cccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-C---cchHHHHHHHHH
Confidence            11234689999999999999999999998877653 234555677888877777665433221 1   134567788999


Q ss_pred             HHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHH
Q 017672          266 GLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGL  327 (368)
Q Consensus       266 gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi  327 (368)
                      +++++++++.++++++++.++.+++.+.+++|+++++++++++||++++.+++|+++++.|+
T Consensus       198 ~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       198 GLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999999999999999999999999999986

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.97  E-value=3.6e-29  Score=231.23  Aligned_cols=281  Identities=11%  Similarity=0.059  Sum_probs=216.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017672           21 IFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTLSLNLYYVA  100 (368)
Q Consensus        21 ~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a  100 (368)
                      ++-.++-....+..|++.++-..|..+++.|+.++.+.+.+... ...+++++.+++++.+++..|++. +.++.+.+.|
T Consensus         8 ~~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~   85 (302)
T TIGR00817         8 GLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWS-SGLPKRLKISSALLKLLLPVAIVH-TIGHVTSNVS   85 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence            33344444455788999885366999999999998877665521 122234456788999999999995 7888899999


Q ss_pred             ccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCCCChhhhhcccCC
Q 017672          101 INYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYPEIQKQVSES  180 (368)
Q Consensus       101 l~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~  180 (368)
                      ++|++++.++++.++.|+++++++++++|||++++      +++|++++++|+.+...  +                   
T Consensus        86 l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~------~~~~l~l~~~Gv~l~~~--~-------------------  138 (302)
T TIGR00817        86 LSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPST------LWLSLLPIVGGVALASD--T-------------------  138 (302)
T ss_pred             HHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHhhhcC--C-------------------
Confidence            99999999999999999999999999999999999      99999999999987531  1                   


Q ss_pred             CCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhh--hCCCcchhHHHHHHHHHHHHHHHHHHhhcCCC---cccc--
Q 017672          181 SPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIK--QYPAKVRLTTLQCFFSCIQSAFWAVAAERNPS---AWKL--  253 (368)
Q Consensus       181 ~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--  253 (368)
                            +.+....|++++++++++|++|.+..||..+  ++++ ...+.+++..+.+.++|.....++...   ++..  
T Consensus       139 ------~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~-~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~  211 (302)
T TIGR00817       139 ------ELSFNWAGFLSAMISNITFVSRNIFSKKAMTIKSLDK-TNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAI  211 (302)
T ss_pred             ------cccccHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCc-ccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhh
Confidence                  1122357999999999999999999999887  5654 899999999999998888765543211   0000  


Q ss_pred             ---cchhhHHHHHHHHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHh
Q 017672          254 ---GWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSV  330 (368)
Q Consensus       254 ---~~~~~~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~  330 (368)
                         .....+...++.+..+....+.++++++++.+|++.++...++|+++++++++++||++++.+++|+++++.|++++
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~  291 (302)
T TIGR00817       212 SGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLY  291 (302)
T ss_pred             cccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHH
Confidence               00011111222233233333356668999999999999999999999999999999999999999999999999999


Q ss_pred             hcccccc
Q 017672          331 LWGKNRE  337 (368)
Q Consensus       331 ~~~~~~~  337 (368)
                      .+.|.+|
T Consensus       292 ~~~k~~~  298 (302)
T TIGR00817       292 SRVKAQK  298 (302)
T ss_pred             HHHhccC
Confidence            8655433

specificities overlap.

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.96  E-value=1.2e-27  Score=218.63  Aligned_cols=275  Identities=14%  Similarity=0.157  Sum_probs=205.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhh-ccCCCCCCHHHHHHHHHHHHHHHHHHH
Q 017672           16 PYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLE-SQNASPLSYSSVCKIFLVSLFGLTLSL   94 (368)
Q Consensus        16 ~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~   94 (368)
                      .+++.++++++|+..++..|...++ -++  ..+++.....+++.++...+. ++.++..+ ++++.....+.++...++
T Consensus         2 ~~~~~~~aa~~~a~~~~~~k~~~~~-~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~   77 (281)
T TIGR03340         2 ALTLVVFSALMHAGWNLMAKSHADK-EPD--FLWWALLAHSVLLTPYGLWYLAQVGWSRLP-ATFWLLLAISAVANMVYF   77 (281)
T ss_pred             cHHHHHHHHHHHHHHHHHHhhcCCc-hhH--HHHHHHHHHHHHHHHHHHHhcccCCCCCcc-hhhHHHHHHHHHHHHHHH
Confidence            3578899999999999999966554 344  347777777778877765432 22233323 444445555666668888


Q ss_pred             HHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCCCChhhh
Q 017672           95 NLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYPEIQ  174 (368)
Q Consensus        95 ~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~~~~~~~  174 (368)
                      .+++.|+++++++.++++.++.|+++.+++++++|||++++      +++|+.+++.|+.++... +.            
T Consensus        78 ~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~------~~~g~~~~~~Gv~ll~~~-~~------------  138 (281)
T TIGR03340        78 LGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPL------AWLGILIITLGLLVLGLS-RF------------  138 (281)
T ss_pred             HHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHH------HHHHHHHHHHHHHHHhcc-cc------------
Confidence            89999999999999999999999999999999999999999      999999999999988641 11            


Q ss_pred             hcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHH-HHHHHHh--hcCCCcc
Q 017672          175 KQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQS-AFWAVAA--ERNPSAW  251 (368)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~  251 (368)
                                  . .....|+.++++++++|++|.+..|+..++.++ ..........+.+.. .+.....  .+.. ..
T Consensus       139 ------------~-~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  203 (281)
T TIGR03340       139 ------------A-QHRRKAYAWALAAALGTAIYSLSDKAAALGVPA-FYSALGYLGIGFLAMGWPFLLLYLKRHGR-SM  203 (281)
T ss_pred             ------------c-ccchhHHHHHHHHHHHHHHhhhhccccccchhc-ccccHHHHHHHHHHHHHHHHHHHHHHhcc-ch
Confidence                        1 122368889999999999999998886544433 221111122222221 2222111  1111 11


Q ss_pred             cccchhhHHHHHHHHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHH
Q 017672          252 KLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYS  329 (368)
Q Consensus       252 ~~~~~~~~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~  329 (368)
                      . .....+..+++.+.+++.++|.++++++++.++++++.+.+++|+++.+++++++||++++.+++|+++++.|+++
T Consensus       204 ~-~~~~~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       204 F-PYARQILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             h-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            1 1223456677888889999999999999999999999999999999999999999999999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.96  E-value=1.2e-26  Score=212.33  Aligned_cols=300  Identities=16%  Similarity=0.215  Sum_probs=234.3

Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHHHHHHHHhhhhc-cCCCCCCHHHHHHHHHHHHHH
Q 017672           12 ASQKPYIAMIFVQFAYAGMALFSKAAIAKGMN-PFVFVVYRQAFASLALSPFAFFLES-QNASPLSYSSVCKIFLVSLFG   89 (368)
Q Consensus        12 ~~~~~~~~~~l~~~~~~~~~~~~k~~~~~g~~-~~~~~~~r~~~~~l~l~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~   89 (368)
                      +-.+..++-=+.+++-..+...+..+.+.|.+ |....++.++.-.++..+....++. +++.+..+++|+++++++++-
T Consensus        10 ~~~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~D   89 (334)
T PF06027_consen   10 RFWIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLD   89 (334)
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHH
Confidence            44556666666677788888888888777776 8888888888777777766554433 223333457788888899887


Q ss_pred             HHHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCCC
Q 017672           90 LTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNW  169 (368)
Q Consensus        90 ~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~~  169 (368)
                      .. ++.+.+.|++||+.+.++++..+..+++.+++++++|||.++.      |++|+++++.|+.++...+...      
T Consensus        90 v~-aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~------~~~gv~i~i~Gv~lv~~sD~~~------  156 (334)
T PF06027_consen   90 VE-ANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWF------HILGVLICIAGVVLVVVSDVLS------  156 (334)
T ss_pred             HH-HHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHH------HHHHHHHHHhhhhheeeecccc------
Confidence            54 4559999999999999999999999999999999999999999      9999999999999987633211      


Q ss_pred             ChhhhhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCCC
Q 017672          170 YPEIQKQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPS  249 (368)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (368)
                                  ++++.+..+..+|+++++.++++||++++++++..++.+. ........+++.++..+.....|.+.-
T Consensus       157 ------------~~~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~~~-~~~lg~~Glfg~ii~~iq~~ile~~~i  223 (334)
T PF06027_consen  157 ------------GSDSSSGSNPILGDLLALLGAILYAVSNVLEEKLVKKAPR-VEFLGMLGLFGFIISGIQLAILERSGI  223 (334)
T ss_pred             ------------cccCCCCCccchhHHHHHHHHHHHHHHHHHHHHhcccCCH-HHHHHHHHHHHHHHHHHHHHheehhhh
Confidence                        1111244566899999999999999999999999999764 777888888888888877766665421


Q ss_pred             cccccchhhHHHHHHHHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHH
Q 017672          250 AWKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYS  329 (368)
Q Consensus       250 ~~~~~~~~~~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~  329 (368)
                      + ...++...........++..+-|.+....++..+|+..++-..+..+++++++++++|+++++..++|.++|+.|.++
T Consensus       224 ~-~~~w~~~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vv  302 (334)
T PF06027_consen  224 E-SIHWTSQVIGLLVGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVV  302 (334)
T ss_pred             h-ccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhhe
Confidence            1 111223333333333446667788888999999999999999999999999999999999999999999999999999


Q ss_pred             hhccccccc
Q 017672          330 VLWGKNREE  338 (368)
Q Consensus       330 ~~~~~~~~~  338 (368)
                      +....+++.
T Consensus       303 y~~~~~~~~  311 (334)
T PF06027_consen  303 YNLAESPEE  311 (334)
T ss_pred             EEccCCccc
Confidence            887665443

Some of the sequences in this family are annotated as putative membrane proteins.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.95  E-value=2.8e-26  Score=215.27  Aligned_cols=284  Identities=11%  Similarity=0.054  Sum_probs=221.0

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHHHHHHHHhhhhccCCCCC--CHHHHHHHHHHHHHH
Q 017672           13 SQKPYIAMIFVQFAYAGMALFSKAAIAKGMN-PFVFVVYRQAFASLALSPFAFFLESQNASPL--SYSSVCKIFLVSLFG   89 (368)
Q Consensus        13 ~~~~~~~~~l~~~~~~~~~~~~k~~~~~g~~-~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~   89 (368)
                      +.+...+.+.--.+-.......|.+.+. ++ |+.++++|++++.+++.++..... ++.++.  .++++..++..|+++
T Consensus        47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~~-~~~P~~l~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~llp~gl~~  124 (350)
T PTZ00343         47 KWKLALLFLTWYALNVLYVVDNKLALNM-LPLPWTISSLQLFVGWLFALLYWATGF-RKIPRIKSLKLFLKNFLPQGLCH  124 (350)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChhHHHHHHHHHHHHHHHHHHHHhCC-CCCCCCCCHHHHHHHHHHHHHHH
Confidence            4455556666666667778889999997 99 999999999999887665543222 222333  245778889999988


Q ss_pred             HHHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCCC
Q 017672           90 LTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNW  169 (368)
Q Consensus        90 ~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~~  169 (368)
                      ... +...+.|+++++++.++++.++.|+++++++++++|||++++      ++.+++++++|+++.+.  +        
T Consensus       125 ~~~-~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~------~~l~l~l~v~Gv~l~~~--~--------  187 (350)
T PTZ00343        125 LFV-HFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLY------AYLSLIPIVGGVALASV--K--------  187 (350)
T ss_pred             HHH-HHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHH------HHHHHHHHHHHHHheec--c--------
Confidence            665 446779999999999999999999999999999999999999      99999999999999863  1        


Q ss_pred             ChhhhhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCC------CcchhHHHHHHHHHHHHHHHHHH
Q 017672          170 YPEIQKQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYP------AKVRLTTLQCFFSCIQSAFWAVA  243 (368)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~  243 (368)
                                       +.+....|++++++|+++|+++.+..|+..++.+      ++.....+....+.++++|+...
T Consensus       188 -----------------~~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~  250 (350)
T PTZ00343        188 -----------------ELHFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLF  250 (350)
T ss_pred             -----------------cchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence                             1122367999999999999999999999887643      12345555678888888888765


Q ss_pred             hhcCC--Ccc----cccchhhHHHHHHHHHHhhhHHHHHHHH----HHhccCcceeeecchhHHHHHHHHHHHHhccccc
Q 017672          244 AERNP--SAW----KLGWDIHLVSVVYCGLVINGITYWIQVW----AIEKKGPVFIAIFTPFALIITAIFSAFLWKETLH  313 (368)
Q Consensus       244 ~~~~~--~~~----~~~~~~~~~~l~~~gi~~~~i~~~l~~~----a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~  313 (368)
                      .|...  ..+    .......+..+++ .++.+++.+++++.    ++++++|...++..+++|+++++++++++||+++
T Consensus       251 ~e~~~~~~~~~~~~~~~~~~~~~~~l~-~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt  329 (350)
T PTZ00343        251 FEGKKWVPVWTNYTANMTNYTKGIIIF-KIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVT  329 (350)
T ss_pred             HhhHHHHHHHHHhhhcccccchHHHHH-HHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCc
Confidence            54321  011    0001112233344 35567888888885    9999999999999999999999999999999999


Q ss_pred             chhHhHHHHHHHHHHHhhcc
Q 017672          314 WGSVGGAVLLVGGLYSVLWG  333 (368)
Q Consensus       314 ~~~~~G~~lii~gi~~~~~~  333 (368)
                      +.+++|+++++.|++++.+-
T Consensus       330 ~~~~iG~~lii~Gv~lYs~~  349 (350)
T PTZ00343        330 LLGYLGMAVAILGALLYSLF  349 (350)
T ss_pred             hHhHHHHHHHHHHHHHHhhc
Confidence            99999999999999998754

>TIGR00688 rarD rarD protein

Probab=99.95  E-value=4.7e-26  Score=205.51  Aligned_cols=248  Identities=12%  Similarity=0.126  Sum_probs=183.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhcc-----CCCCCCHHH-HHHHHHHHHH
Q 017672           15 KPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQ-----NASPLSYSS-VCKIFLVSLF   88 (368)
Q Consensus        15 ~~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~-----~~~~~~~~~-~~~~~~~g~~   88 (368)
                      +|++++++++++||.++++.|. .++ ++|.++.++|++++.+++.++...++++     +.++.++++ +......|++
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~~-~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   79 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LKP-LPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL   79 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hcc-CCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence            5889999999999999999998 454 9999999999999998887765433221     111112233 3345555555


Q ss_pred             HHHHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCC
Q 017672           89 GLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLN  168 (368)
Q Consensus        89 ~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~  168 (368)
                       ...++.++++|++++++++++++.++.|+++++++++++|||++++      ++++++++++|++++...++       
T Consensus        80 -~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~------~~l~~~~~~~Gv~li~~~~~-------  145 (256)
T TIGR00688        80 -IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRF------QFIAVIIATLGVISNIVLKG-------  145 (256)
T ss_pred             -HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH------HHHHHHHHHHHHHHHHHHcC-------
Confidence             5788889999999999999999999999999999999999999999      99999999999998864211       


Q ss_pred             CChhhhhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCC
Q 017672          169 WYPEIQKQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNP  248 (368)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (368)
                                        + ..     .+++.++++|+.|.+..|+..++ +. ...... .........+.. ...+..
T Consensus       146 ------------------~-~~-----~~~l~aa~~~a~~~i~~~~~~~~-~~-~~~~~~-~~~~~~~~~~~~-~~~~~~  197 (256)
T TIGR00688       146 ------------------S-LP-----WEALVLAFSFTAYGLIRKALKNT-DL-AGFCLE-TLSLMPVAIYYL-LQTDFA  197 (256)
T ss_pred             ------------------C-ch-----HHHHHHHHHHHHHHHHHhhcCCC-Cc-chHHHH-HHHHHHHHHHHH-HHhccC
Confidence                              1 11     35788999999999999996543 32 222211 112222222111 111111


Q ss_pred             CcccccchhhHHHHHHHHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHH
Q 017672          249 SAWKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFL  307 (368)
Q Consensus       249 ~~~~~~~~~~~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~  307 (368)
                      ......+...|..+++.|++ +.++|.++++++|+.++++++...+++|+++.+++.++
T Consensus       198 ~~~~~~~~~~~~~l~~~g~~-t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       198 TVQQTNPFPIWLLLVLAGLI-TGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             cccccCchhHHHHHHHHHHH-HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            11111222467888888875 88999999999999999999999999999999999874

This uncharacterized protein is predicted to have many membrane-spanning domains.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.93  E-value=1.8e-23  Score=191.77  Aligned_cols=284  Identities=21%  Similarity=0.299  Sum_probs=217.6

Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHH
Q 017672           11 TASQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGL   90 (368)
Q Consensus        11 ~~~~~~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   90 (368)
                      ++...+..+.++..+.|+......|...++..++....+.|...+.++..+.....+....+.  .+.+....+.+.+..
T Consensus         3 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~   80 (292)
T COG0697           3 RALLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLRPA--LRPWLLLLLLALLGL   80 (292)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhccccccc--ccchHHHHHHHHHHH
Confidence            346677888888999999999999998775356666667699988887444332221111121  222456677777778


Q ss_pred             HHHHHHHHHhccccChhhhhhcccchhHHHHHHHH-HHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCCC
Q 017672           91 TLSLNLYYVAINYTTATFAAATTNTIPAITFVLAG-LLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNW  169 (368)
Q Consensus        91 ~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~-~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~~  169 (368)
                      .....+++.++++++++.++++.++.|+++.+++. +++|||++++      ++.++.+++.|++++...+...      
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~------~~~~~~~~~~Gv~lv~~~~~~~------  148 (292)
T COG0697          81 ALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLL------QILGILLALAGVLLILLGGGGG------  148 (292)
T ss_pred             HHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHH------HHHHHHHHHHhHHheecCCCcc------
Confidence            88999999999999999999999999999999997 7779999999      9999999999999997522110      


Q ss_pred             ChhhhhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHH-HHHHHHHHHHHHHHHHhhcCC
Q 017672          170 YPEIQKQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTT-LQCFFSCIQSAFWAVAAERNP  248 (368)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  248 (368)
                                       ... ...|+.+++.++++++++.+..|+.. +.++ ..... +..........+..  .. ..
T Consensus       149 -----------------~~~-~~~g~~~~l~a~~~~a~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~--~~-~~  205 (292)
T COG0697         149 -----------------GIL-SLLGLLLALAAALLWALYTALVKRLS-RLGP-VTLALLLQLLLALLLLLLFF--LS-GF  205 (292)
T ss_pred             -----------------hhH-HHHHHHHHHHHHHHHHHHHHHHHHhc-CCCh-HHHHHHHHHHHHHHHHHHHH--hc-cc
Confidence                             111 57899999999999999999999987 4332 44444 33331111111211  11 11


Q ss_pred             CcccccchhhHHHHHHHHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHH
Q 017672          249 SAWKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLY  328 (368)
Q Consensus       249 ~~~~~~~~~~~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~  328 (368)
                      +  .......+..+.+.|++.+++++.++++++++.++.+.+.+.+++|+++.+++++++||+++..+++|+.+++.|+.
T Consensus       206 ~--~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~  283 (292)
T COG0697         206 G--APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVL  283 (292)
T ss_pred             c--ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHH
Confidence            1  12233568888999999998999999999999999999999999999999999999999999999999999999999


Q ss_pred             Hhhcc
Q 017672          329 SVLWG  333 (368)
Q Consensus       329 ~~~~~  333 (368)
                      +...+
T Consensus       284 l~~~~  288 (292)
T COG0697         284 LASLR  288 (292)
T ss_pred             HHhcc
Confidence            88765

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.91  E-value=2.5e-22  Score=175.28  Aligned_cols=282  Identities=12%  Similarity=0.139  Sum_probs=226.8

Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccC-CCC--CCHHHHHHHHHHHH
Q 017672           11 TASQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQN-ASP--LSYSSVCKIFLVSL   87 (368)
Q Consensus        11 ~~~~~~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~-~~~--~~~~~~~~~~~~g~   87 (368)
                      .+..+|+++.+.+.++||..+...|.+ +. .++.++...|...+.+++..+....++++ ..+  .+++.+....+.++
T Consensus         3 ~~~~~Gil~~l~Ay~lwG~lp~y~kll-~~-~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~   80 (293)
T COG2962           3 KDSRKGILLALLAYLLWGLLPLYFKLL-EP-LPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTAL   80 (293)
T ss_pred             CcccchhHHHHHHHHHHHHHHHHHHHH-cc-CCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHH
Confidence            456789999999999999999999966 44 89999999999999998887765543321 111  12345555555555


Q ss_pred             HHHHHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCC
Q 017672           88 FGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFL  167 (368)
Q Consensus        88 ~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~  167 (368)
                      + +..++..|.+|.++...-++++-++..|++.++++.+|+|||+++.      |+++++++.+||....+..|+     
T Consensus        81 l-i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~------Q~iAV~lA~~GV~~~~~~~g~-----  148 (293)
T COG2962          81 L-IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRL------QWIAVGLAAAGVLIQTWLLGS-----  148 (293)
T ss_pred             H-HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHH------HHHHHHHHHHHHHHHHHHcCC-----
Confidence            5 6899999999999999999999999999999999999999999999      999999999999999885332     


Q ss_pred             CCChhhhhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcC
Q 017672          168 NWYPEIQKQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERN  247 (368)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (368)
                                              ..  ..++.-++.|+.|....|+.  +.++ .+.....+..-.+..+.+.+..+..
T Consensus       149 ------------------------lp--wval~la~sf~~Ygl~RK~~--~v~a-~~g~~lE~l~l~p~al~yl~~l~~~  199 (293)
T COG2962         149 ------------------------LP--WVALALALSFGLYGLLRKKL--KVDA-LTGLTLETLLLLPVALIYLLFLADS  199 (293)
T ss_pred             ------------------------Cc--HHHHHHHHHHHHHHHHHHhc--CCch-HHhHHHHHHHHhHHHHHHHHHHhcC
Confidence                                    11  23466678999999997774  3344 7777788877777777777665554


Q ss_pred             CCcccccchhhHHHHHHHHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHH
Q 017672          248 PSAWKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGL  327 (368)
Q Consensus       248 ~~~~~~~~~~~~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi  327 (368)
                      .+.....+...+..++..|. .+.++..++..+.|+++-+..+.++|.+|..-.+++.+++||+++.-++...++|-.|+
T Consensus       200 ~~~~~~~~~~~~~LLv~aG~-vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL  278 (293)
T COG2962         200 GQFLQQNANSLWLLLVLAGL-VTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLAL  278 (293)
T ss_pred             chhhhcCCchHHHHHHHhhH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHH
Confidence            43111233345666666676 67799999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhccccc
Q 017672          328 YSVLWGKNR  336 (368)
Q Consensus       328 ~~~~~~~~~  336 (368)
                      .++.+..-+
T Consensus       279 ~l~~~d~l~  287 (293)
T COG2962         279 ALFSIDGLY  287 (293)
T ss_pred             HHHHHHHHH
Confidence            988765443

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.91  E-value=2.4e-25  Score=190.04  Aligned_cols=293  Identities=17%  Similarity=0.166  Sum_probs=217.9

Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHH
Q 017672           12 ASQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLT   91 (368)
Q Consensus        12 ~~~~~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   91 (368)
                      +..+|.++..++ ..+....++.+...+  .+|....-.|+++-.++-.|-.+.++...+.+  .....++++.|.+|..
T Consensus        35 ~p~~gl~l~~vs-~ff~~~~vv~t~~~e--~~p~e~a~~r~l~~mlit~pcliy~~~~v~gp--~g~R~~LiLRg~mG~t  109 (346)
T KOG4510|consen   35 KPNLGLLLLTVS-YFFNSCMVVSTKVLE--NDPMELASFRLLVRMLITYPCLIYYMQPVIGP--EGKRKWLILRGFMGFT  109 (346)
T ss_pred             CCccCceehhhH-HHHhhHHHhhhhhhc--cChhHhhhhhhhhehhhhheEEEEEeeeeecC--CCcEEEEEeehhhhhh
Confidence            677888888888 555555555555555  69999999998877777666554444333222  2334456777888755


Q ss_pred             HHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCCCCh
Q 017672           92 LSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYP  171 (368)
Q Consensus        92 ~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~~~~  171 (368)
                      +-+ +.|+|++|.+.+++++|..+.|+++.+++|+++|||.++.      +.++..+.+.|++++.-  .+. .+.++  
T Consensus       110 gvm-lmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~------eaL~s~itl~GVVLIvR--PpF-lFG~~--  177 (346)
T KOG4510|consen  110 GVM-LMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKF------EALGSLITLLGVVLIVR--PPF-LFGDT--  177 (346)
T ss_pred             HHH-HHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHH------HHHHHHHhhheEEEEec--CCc-ccCCC--
Confidence            444 7778999999999999999999999999999999999999      99999999999999963  221 11111  


Q ss_pred             hhhhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 017672          172 EIQKQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAW  251 (368)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (368)
                             ++++++. ....+.+|...++.+++.-|--.++.|+..|+.+. .....+...++.+..++......    .+
T Consensus       178 -------t~g~~~s-~~~~~~~gt~aai~s~lf~asvyIilR~iGk~~h~-~msvsyf~~i~lV~s~I~~~~ig----~~  244 (346)
T KOG4510|consen  178 -------TEGEDSS-QVEYDIPGTVAAISSVLFGASVYIILRYIGKNAHA-IMSVSYFSLITLVVSLIGCASIG----AV  244 (346)
T ss_pred             -------ccccccc-cccccCCchHHHHHhHhhhhhHHHHHHHhhccccE-EEEehHHHHHHHHHHHHHHhhcc----ce
Confidence                   1111111 12344567888888888888888889998888765 55555556666665555442221    22


Q ss_pred             ccc-chhhHHHHHHHHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHh
Q 017672          252 KLG-WDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSV  330 (368)
Q Consensus       252 ~~~-~~~~~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~  330 (368)
                      ..+ ...+|+.++.+|++ +.+++.+.+.++|+..+...+++.+++.+++.+++.++|||.|++++|.|+++++.+.+.+
T Consensus       245 ~lP~cgkdr~l~~~lGvf-gfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~  323 (346)
T KOG4510|consen  245 QLPHCGKDRWLFVNLGVF-GFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWV  323 (346)
T ss_pred             ecCccccceEEEEEehhh-hhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHH
Confidence            222 23567777888884 4689999999999999999999999999999999999999999999999999999998777


Q ss_pred             hcccc
Q 017672          331 LWGKN  335 (368)
Q Consensus       331 ~~~~~  335 (368)
                      ...|.
T Consensus       324 a~~kw  328 (346)
T KOG4510|consen  324 ALKKW  328 (346)
T ss_pred             HHHHH
Confidence            65443

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.90  E-value=1.8e-21  Score=165.43  Aligned_cols=274  Identities=14%  Similarity=0.106  Sum_probs=224.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHH
Q 017672           15 KPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTLSL   94 (368)
Q Consensus        15 ~~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   94 (368)
                      .++..++.+++.-=....+.|.+... +.+.-.+.+|..++.+++..+...++    .+.++++++.++..|+.- ...+
T Consensus        12 ~p~~~ll~amvsiq~Gas~Ak~LFP~-vG~~g~t~lRl~~aaLIll~l~RPwr----~r~~~~~~~~~~~yGvsL-g~MN   85 (292)
T COG5006          12 LPILALLVAMVSIQSGASFAKSLFPL-VGAAGVTALRLAIAALILLALFRPWR----RRLSKPQRLALLAYGVSL-GGMN   85 (292)
T ss_pred             ccHHHHHHHHHHHHhhHHHHHHHccc-cChhhHHHHHHHHHHHHHHHHhhHHH----hccChhhhHHHHHHHHHH-HHHH
Confidence            37888888888888889999999998 99999999999999999998765433    234578899999999774 5666


Q ss_pred             HHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCCCChhhh
Q 017672           95 NLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYPEIQ  174 (368)
Q Consensus        95 ~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~~~~~~~  174 (368)
                      .+||.+++..|.+.+..+.++.|+.+..++-=    |  .+      ..+.+.+++.|+.++.-. ++.           
T Consensus        86 l~FY~si~riPlGiAVAiEF~GPL~vA~~~sR----r--~~------d~vwvaLAvlGi~lL~p~-~~~-----------  141 (292)
T COG5006          86 LLFYLSIERIPLGIAVAIEFTGPLAVALLSSR----R--LR------DFVWVALAVLGIWLLLPL-GQS-----------  141 (292)
T ss_pred             HHHHHHHHhccchhhhhhhhccHHHHHHHhcc----c--hh------hHHHHHHHHHHHHhheec-cCC-----------
Confidence            69999999999999999999999988876641    1  34      778888999999988642 211           


Q ss_pred             hcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCCCccccc
Q 017672          175 KQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAWKLG  254 (368)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (368)
                                  ...-+..|..+++.++.||+.|.+..+|..+..+. -.....-+.++.++.+|+......+  .  ..
T Consensus       142 ------------~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~g-~~g~a~gm~vAaviv~Pig~~~ag~--~--l~  204 (292)
T COG5006         142 ------------VWSLDPVGVALALGAGACWALYIVLGQRAGRAEHG-TAGVAVGMLVAALIVLPIGAAQAGP--A--LF  204 (292)
T ss_pred             ------------cCcCCHHHHHHHHHHhHHHHHHHHHcchhcccCCC-chHHHHHHHHHHHHHhhhhhhhcch--h--hc
Confidence                        34455799999999999999999999998865443 6788888999999999988543222  1  22


Q ss_pred             chhhHHHHHHHHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhhccc
Q 017672          255 WDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWGK  334 (368)
Q Consensus       255 ~~~~~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~~~~  334 (368)
                      +..-...-+..+++.+.+.|.+-..++++.+....+.+.++||.++.+.|++++||.+|+.||+|+++|+.+..-..+..
T Consensus       205 ~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~  284 (292)
T COG5006         205 SPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTA  284 (292)
T ss_pred             ChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcccccc
Confidence            22334455677889999999999999999999999999999999999999999999999999999999999877655533


Q ss_pred             c
Q 017672          335 N  335 (368)
Q Consensus       335 ~  335 (368)
                      +
T Consensus       285 ~  285 (292)
T COG5006         285 R  285 (292)
T ss_pred             C
Confidence            3

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.89  E-value=2.7e-21  Score=176.99  Aligned_cols=277  Identities=12%  Similarity=0.087  Sum_probs=203.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 017672           16 PYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTLSLN   95 (368)
Q Consensus        16 ~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   95 (368)
                      +++++++++++||.+.+..|...  |.++.++.  |..++.+++..+....+.+++.  .++.+..-++.|.+ ....+.
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~~--g~~~~~~~--~~~~g~l~~~~~~~~~~~~~~~--~~~~~~~g~l~G~~-w~ig~~   74 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKIG--GGPYSQTL--GTTFGALILSIAIAIFVLPEFW--ALSIFLVGLLSGAF-WALGQI   74 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhccC--CCHHHHHH--HHHHHHHHHHHHHHHHhCCccc--ccHHHHHHHHHHHH-HHhhhh
Confidence            57889999999999999999865  58887765  7777777776665543322111  13333333444433 677788


Q ss_pred             HHHHhccccChhhhhhccc-chhHHHHHHHHHHhcccccccccccccc----hhhHHHhHHhHHHHhhhcCCCCCCCCCC
Q 017672           96 LYYVAINYTTATFAAATTN-TIPAITFVLAGLLRIESISIKYLHGIAK----VLGSVVSVSGALVFAFVKGPPLRFLNWY  170 (368)
Q Consensus        96 ~~~~al~~~~~~~~~~i~~-~~p~~~~ll~~~~~~e~~~~~~~~~~~~----~~gi~l~~~Gv~li~~~~~~~~~~~~~~  170 (368)
                      +|+.+.++++.+.+..+.+ +.+++..+.+.+++||+.+.+      +    ++|++++++|++++...++++.      
T Consensus        75 ~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~------~~~~~~~g~~l~l~G~~l~~~~~~~~~------  142 (290)
T TIGR00776        75 NQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSI------QTLLGLLALILIIIGVYLTSRSKDKSA------  142 (290)
T ss_pred             hHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchH------HHHHHHHHHHHHHHhHheEEecccccc------
Confidence            9999999999999999998 888999999999999999999      8    9999999999888854211100      


Q ss_pred             hhhhhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCCCc
Q 017672          171 PEIQKQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSA  250 (368)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (368)
                                   ++....+..+|++++++++++|+.|.+..|+.  ++++ .+..+.+...-.+....+....... .+
T Consensus       143 -------------~~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~--~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~-~~  205 (290)
T TIGR00776       143 -------------GIKSEFNFKKGILLLLMSTIGYLVYVVVAKAF--GVDG-LSVLLPQAIGMVIGGIIFNLGHILA-KP  205 (290)
T ss_pred             -------------ccccccchhhHHHHHHHHHHHHHHHHHHHHHc--CCCc-ceehhHHHHHHHHHHHHHHHHHhcc-cc
Confidence                         00000233679999999999999999999986  3544 7775555442222222211111101 11


Q ss_pred             ccccchhhHHHHHHHHHHhhhHHHHHHHHHHh-ccCcceeeecchhHHHHHHHHHHHHhcccccchhH----hHHHHHHH
Q 017672          251 WKLGWDIHLVSVVYCGLVINGITYWIQVWAIE-KKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSV----GGAVLLVG  325 (368)
Q Consensus       251 ~~~~~~~~~~~l~~~gi~~~~i~~~l~~~a~~-~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~----~G~~lii~  325 (368)
                      +  .. ...+..+..|++ ..+++.+|..+.+ +.+++.++++.+.+|+++.+++++++||+.++.++    +|+++++.
T Consensus       206 ~--~~-~~~~~~~~~Gi~-~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~  281 (290)
T TIGR00776       206 L--KK-YAILLNILPGLM-WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIII  281 (290)
T ss_pred             h--HH-HHHHHHHHHHHH-HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHH
Confidence            1  12 233334447877 6899999999999 99999999999999999999999999999999999    99999999


Q ss_pred             HHHHhhc
Q 017672          326 GLYSVLW  332 (368)
Q Consensus       326 gi~~~~~  332 (368)
                      |+.+...
T Consensus       282 ~~~l~~~  288 (290)
T TIGR00776       282 AANILGI  288 (290)
T ss_pred             HHHHHhc
Confidence            9887654

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.86  E-value=2.5e-19  Score=165.48  Aligned_cols=268  Identities=14%  Similarity=0.140  Sum_probs=207.6

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccChhhhhhcccchhHHHHH
Q 017672           43 NPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFV  122 (368)
Q Consensus        43 ~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~l  122 (368)
                      .|..+++.++....++..+.....+++..   ++..+..+...+++. .++..+.+.|++|.|.....++.++.|+.+++
T Consensus        31 ~~~~lt~~q~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi  106 (303)
T PF08449_consen   31 FPLFLTFVQFAFNALFSFILLSLFKFPKS---RKIPLKKYAILSFLF-FLASVLSNAALKYISYPTQIVFKSSKPIPVMI  106 (303)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhccccCC---CcChHHHHHHHHHHH-HHHHHHHHHHHHhCChHHHHHHhhhHHHHHHH
Confidence            48899999999998887776655442222   234455566666664 66677899999999999999999999999999


Q ss_pred             HHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCCCChhhhhcccCCCCCCCCCCchhHHHHHHHHHHH
Q 017672          123 LAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYPEIQKQVSESSPTNDCPIGRWIKGALIMISAN  202 (368)
Q Consensus       123 l~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~  202 (368)
                      ++.+++|+|.+++      ++.++++.++|+++....+.+..                 +.++........|+++.+++.
T Consensus       107 ~~~l~~~k~y~~~------~~~~v~li~~Gv~~~~~~~~~~~-----------------~~~~~~~~~~~~G~~ll~~sl  163 (303)
T PF08449_consen  107 LGVLILGKRYSRR------QYLSVLLITIGVAIFTLSDSSSS-----------------SSSNSSSFSSALGIILLLLSL  163 (303)
T ss_pred             HHHHhcCccccHH------HHHHHHHHHhhHheeeecccccc-----------------cccccccccchhHHHHHHHHH
Confidence            9999999999999      99999999999999987432211                 111112222334999999999


Q ss_pred             HHHHHHHHHHHHhhhhCC-CcchhHHHHHHHHHHHHHHHHHH--hhcCCCccccc-chhhHHHHHHHHHHhhhHHHHHHH
Q 017672          203 TAWSLWLVLQGYIIKQYP-AKVRLTTLQCFFSCIQSAFWAVA--AERNPSAWKLG-WDIHLVSVVYCGLVINGITYWIQV  278 (368)
Q Consensus       203 ~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~l~~~gi~~~~i~~~l~~  278 (368)
                      ++.|...+.+++..++++ ++.+.+++.+.++.+...+....  .++..+.+... ..+.....+..-.+++.+++...+
T Consensus       164 ~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~~~g~~~i~  243 (303)
T PF08449_consen  164 LLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTGALGQFFIF  243 (303)
T ss_pred             HHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999998776 45789999999999988877766  22221111111 112233333333446778888888


Q ss_pred             HHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhhcccccc
Q 017672          279 WAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWGKNRE  337 (368)
Q Consensus       279 ~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~~~~~~~  337 (368)
                      +..++.+|...+++..++.+++++++.+++|+++++.+|+|.++++.|..++.+.|+++
T Consensus       244 ~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~  302 (303)
T PF08449_consen  244 YLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK  302 (303)
T ss_pred             HHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence            99999999999999999999999999999999999999999999999999998876654

; GO: 0055085 transmembrane transport

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.79  E-value=6.5e-18  Score=151.56  Aligned_cols=301  Identities=13%  Similarity=0.189  Sum_probs=222.8

Q ss_pred             hhhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCC--ChHHHHHHHHHHHHHHHHHHH-------hhhhccC-------C--
Q 017672           10 FTASQKPYIAMIFVQFAYAGMALFSKAAIAKGM--NPFVFVVYRQAFASLALSPFA-------FFLESQN-------A--   71 (368)
Q Consensus        10 ~~~~~~~~~~~~l~~~~~~~~~~~~k~~~~~g~--~~~~~~~~r~~~~~l~l~~~~-------~~~~~~~-------~--   71 (368)
                      -+|...|+.++++..++|-.+.-+.+...+++-  .|+..++.....-.+.+.++.       ...+|.+       .  
T Consensus         9 ~~r~~lGl~lL~~V~viWV~SSeLT~~if~~~~f~kPFfiTY~~ts~fivYL~~~~~~d~~~~~~~~R~~~~~~~~~~e~   88 (416)
T KOG2765|consen    9 RWRWTLGLVLLLLVVVIWVASSELTQSIFEDYNFRKPFFITYLKTSLFIVYLPPFILIDAPWRILETRSKRSNHAIMEEA   88 (416)
T ss_pred             hhHHHHHHHHHHHHHHHHHhHHHHHHHHHhhcccCCceeEeeecccceehhhhhhhhhcchhhhhhhhccccchhhhhhh
Confidence            346778999999999999999999999988733  487777665544333344322       1111100       0  


Q ss_pred             -----------------------------C---------------------CCCHH------------HHHH-HHHHHHH
Q 017672           72 -----------------------------S---------------------PLSYS------------SVCK-IFLVSLF   88 (368)
Q Consensus        72 -----------------------------~---------------------~~~~~------------~~~~-~~~~g~~   88 (368)
                                                   +                     +...|            +..+ .+....+
T Consensus        89 d~e~y~~~~~~~~~~~~~l~~~~~~~~~~~~l~s~~~~~~~s~~~e~~~~~~~~~rs~l~~~~~~t~~~~ak~sl~fc~l  168 (416)
T KOG2765|consen   89 DAEGYFSACTTDKTMESGLSGPESVPDKSPLLGSGEEEKPESTNLEVREKANTKKRSNLKERGKLTATQTAKLSLFFCPL  168 (416)
T ss_pred             hhhccccccccccccccccCCceeeeccccccccccccCCCCccccccccCCcccccchhhhhhhHHHHHHHHHHHHHHH
Confidence                                         0                     00011            2222 2344445


Q ss_pred             HHHHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCC
Q 017672           89 GLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLN  168 (368)
Q Consensus        89 ~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~  168 (368)
                      - ..++..++.|+.+++++..+++.++.-+|+..++.++..||+++.      |.+++++.+.|++++...+...     
T Consensus       169 W-F~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~s------Kllav~~si~GViiVt~~~s~~-----  236 (416)
T KOG2765|consen  169 W-FLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLS------KLLAVFVSIAGVIIVTMGDSKQ-----  236 (416)
T ss_pred             H-HHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHH------HHHHHHHhhccEEEEEeccccc-----
Confidence            4 455669999999999999999999999999999999999999999      9999999999999997532211     


Q ss_pred             CChhhhhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHH---HHHHhh
Q 017672          169 WYPEIQKQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAF---WAVAAE  245 (368)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~  245 (368)
                                    .++....+...|+++++++++.||.|.++.||...+.+..+.+..+..++|..-++.   ...+.+
T Consensus       237 --------------~~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~  302 (416)
T KOG2765|consen  237 --------------NSDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILD  302 (416)
T ss_pred             --------------cccCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHH
Confidence                          112244556899999999999999999999998777643355444444444443332   222222


Q ss_pred             c-CCCcccccchhhHHHHHHHHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHH
Q 017672          246 R-NPSAWKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLV  324 (368)
Q Consensus       246 ~-~~~~~~~~~~~~~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii  324 (368)
                      . ..+.+..+...+...+++.+.+.++++-++|.+|.-..+|..++.-..++...+++.+.++-|.++++.+++|...|+
T Consensus       303 ~~~~e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~If  382 (416)
T KOG2765|consen  303 FFGEERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIF  382 (416)
T ss_pred             HhccCcccCCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHH
Confidence            2 223455666677788889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhccccc
Q 017672          325 GGLYSVLWGKNR  336 (368)
Q Consensus       325 ~gi~~~~~~~~~  336 (368)
                      +|.+.++...+.
T Consensus       383 v~Fv~vn~~~~~  394 (416)
T KOG2765|consen  383 VGFVIVNISSEN  394 (416)
T ss_pred             HHHhheeccccc
Confidence            998888765443

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.75  E-value=6.8e-18  Score=152.93  Aligned_cols=276  Identities=15%  Similarity=0.151  Sum_probs=216.5

Q ss_pred             HHHHHHHHHHHh--cCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccC
Q 017672           28 AGMALFSKAAIA--KGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTLSLNLYYVAINYTT  105 (368)
Q Consensus        28 ~~~~~~~k~~~~--~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~  105 (368)
                      .......|+.++  ..--|..++.++..++.+.++....+...+..+..++..+..++.+|++. +++..+-+.++.+.+
T Consensus        30 v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~-~~~~v~~n~Sl~~v~  108 (316)
T KOG1441|consen   30 VGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVF-CISHVLGNVSLSYVP  108 (316)
T ss_pred             eeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHH-HHHHHhcchhhhccc
Confidence            334456788877  43558888888888777777766555444333322445677788888775 778889999999999


Q ss_pred             hhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCCCChhhhhcccCCCCCCC
Q 017672          106 ATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYPEIQKQVSESSPTND  185 (368)
Q Consensus       106 ~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (368)
                      ++..+.+..+.|++++++++++.+|+.+++      .+..+.....|+.+.+..                          
T Consensus       109 VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~------~~lsL~piv~GV~ias~~--------------------------  156 (316)
T KOG1441|consen  109 VSFYQTIKALMPPFTVLLSVLLLGKTYSSM------TYLSLLPIVFGVAIASVT--------------------------  156 (316)
T ss_pred             hhHHHHHHhhcchhHHHHHHHHhCCCCcce------EEEEEEEeeeeEEEeeec--------------------------
Confidence            999999999999999999999999999999      999999999999998752                          


Q ss_pred             CCCchhHHHHHHHHHHHHHHHHHHHHHHHhhh--hCC-CcchhHHHHHHHHHHHHH-HHHHHhhcCCC---cccccchhh
Q 017672          186 CPIGRWIKGALIMISANTAWSLWLVLQGYIIK--QYP-AKVRLTTLQCFFSCIQSA-FWAVAAERNPS---AWKLGWDIH  258 (368)
Q Consensus       186 ~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~  258 (368)
                       +.+-+..|.+.++++.+..+..+++.|+..+  +.+ ++.....++.-.+.+.++ |+....+++..   ... .+...
T Consensus       157 -e~~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~-~~~~~  234 (316)
T KOG1441|consen  157 -ELSFNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTA-PWFVT  234 (316)
T ss_pred             -cccccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeecc-ccchh
Confidence             2334578999999999999999999999884  222 458888898889988888 77766555432   110 11122


Q ss_pred             HHHHHHHHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhhccccccc
Q 017672          259 LVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWGKNREE  338 (368)
Q Consensus       259 ~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~~~~~~~~  338 (368)
                      ....++.. ++....+...+..+.+++|...++.+.+.-++.++.++++|+++.++.+..|+++.+.|+++|.+.|.+++
T Consensus       235 ~~~~~~~s-v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~  313 (316)
T KOG1441|consen  235 FLILLLNS-VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEK  313 (316)
T ss_pred             hHHHHHHH-HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhh
Confidence            33333334 45555666777889999999999999999999999999999999999999999999999999998777655


Q ss_pred             h
Q 017672          339 R  339 (368)
Q Consensus       339 ~  339 (368)
                      +
T Consensus       314 ~  314 (316)
T KOG1441|consen  314 K  314 (316)
T ss_pred             c
Confidence            4

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.70  E-value=2.1e-15  Score=127.06  Aligned_cols=259  Identities=14%  Similarity=0.130  Sum_probs=194.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccChhhhhhcccchhHHHHHH
Q 017672           44 PFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVL  123 (368)
Q Consensus        44 ~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll  123 (368)
                      ...++++++....++--.+...+++.+..+.  +.+ .+...+ ....++....+.|++|+|-....+-.++.|+-++++
T Consensus        53 alaLVf~qC~~N~vfAkvl~~ir~~~~~D~t--~~~-~YaAcs-~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMil  128 (337)
T KOG1580|consen   53 ALALVFFQCTANTVFAKVLFLIRKKTEIDNT--PTK-MYAACS-ASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMIL  128 (337)
T ss_pred             HHHHHHHHHHHHHHHHHhheeecccccccCC--cch-HHHHHH-HHHHHHHHhccchhcccCCcHHHhcccCCCcceeee
Confidence            4556677777666665554444332222221  112 222233 334566667789999999999999999999999999


Q ss_pred             HHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCCCChhhhhcccCCCCCCCCCCchhHHHHHHHHHHHH
Q 017672          124 AGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYPEIQKQVSESSPTNDCPIGRWIKGALIMISANT  203 (368)
Q Consensus       124 ~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~  203 (368)
                      +.++.+.+-+|+      ++.+++++++|+++... +..+.                   .+..+.+...|-++.+++..
T Consensus       129 GVl~~~KsY~w~------kY~cVL~IV~GValFmY-K~~Kv-------------------~g~e~~t~g~GElLL~lSL~  182 (337)
T KOG1580|consen  129 GVLFAHKSYHWR------KYCCVLMIVVGVALFMY-KENKV-------------------GGAEDKTFGFGELLLILSLA  182 (337)
T ss_pred             ehhhhcccccHH------HHHHHHHHHHHHHHhhc-ccccc-------------------CCCcccccchHHHHHHHHHH
Confidence            999988888888      99999999999999987 32221                   12245566789999999999


Q ss_pred             HHHHHHHHHHHhhhhCCC-cchhHHHHHHHHHHHHHHHHHHhhcCCC--cccccchhhHHHHHHHHHHhhhHHHHHHHHH
Q 017672          204 AWSLWLVLQGYIIKQYPA-KVRLTTLQCFFSCIQSAFWAVAAERNPS--AWKLGWDIHLVSVVYCGLVINGITYWIQVWA  280 (368)
Q Consensus       204 ~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~gi~~~~i~~~l~~~a  280 (368)
                      +-+.....+.+..+.+.+ .-..+++.++.+.+.+....++..+..+  .+...-+..|+-+..+++ ++.+++++.+.-
T Consensus       183 mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai-~s~LGQ~fIF~t  261 (337)
T KOG1580|consen  183 MDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAI-ASCLGQWFIFKT  261 (337)
T ss_pred             hcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHH-HHHhhhHHHHHH
Confidence            999999999988766552 3568888899998888776655432211  111112245666667776 888999999999


Q ss_pred             HhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhhcc
Q 017672          281 IEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWG  333 (368)
Q Consensus       281 ~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~~~  333 (368)
                      +...+|-.-+++..++.+++++.+.++++.+++..||+|.++++.|...-...
T Consensus       262 v~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~  314 (337)
T KOG1580|consen  262 VEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVD  314 (337)
T ss_pred             HHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhc
Confidence            99999999999999999999999999999999999999999999997765443

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.68  E-value=1.8e-14  Score=126.22  Aligned_cols=295  Identities=12%  Similarity=0.131  Sum_probs=209.4

Q ss_pred             CcccchhhhhhhhhhhHHHHHHHHHHH--HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccC---CCCCC
Q 017672            1 MKSLLCRNAFTASQKPYIAMIFVQFAY--AGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQN---ASPLS   75 (368)
Q Consensus         1 m~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~---~~~~~   75 (368)
                      |.+...++.++.+....+..++.--+.  +..+...+.-.+. -=|+.++.++.++-.++........+++.   +...+
T Consensus         1 ~~~~~~~~~~~~~rV~~L~lVl~yY~~Si~Ltf~~~~~~~~f-~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~s   79 (349)
T KOG1443|consen    1 MGRWALDNQFLMNRVLTLALVLLYYFLSIGLTFYFKWLTKNF-HFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLS   79 (349)
T ss_pred             CCccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCc-CCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCc
Confidence            445555555554444444444332222  2333333322222 23888888888887777666554444322   23567


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHH
Q 017672           76 YSSVCKIFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALV  155 (368)
Q Consensus        76 ~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~l  155 (368)
                      |++..+.+...++..++...+.+++++|++.+..++..+..++|+.+++.+|.-||+++.      -..-++++.+|+.+
T Consensus        80 w~~~Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~------L~l~v~lI~~Glfl  153 (349)
T KOG1443|consen   80 WRDYLRRLAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWA------LVLIVLLIAVGLFL  153 (349)
T ss_pred             HHHHHHHhhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHH------HHHHHHHHhhheeE
Confidence            887776655555556888889999999999999999999999999999999999999998      88888888888888


Q ss_pred             HhhhcCCCCCCCCCChhhhhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCC----CcchhHHHHHH
Q 017672          156 FAFVKGPPLRFLNWYPEIQKQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYP----AKVRLTTLQCF  231 (368)
Q Consensus       156 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~----~~~~~~~~~~~  231 (368)
                      +++ +.                          .+-...|..+..+++++.++-..+.+...++.|    +|....+...-
T Consensus       154 ft~-Ks--------------------------Tqf~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p  206 (349)
T KOG1443|consen  154 FTY-KS--------------------------TQFNIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQP  206 (349)
T ss_pred             EEe-cc--------------------------cceeehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhh
Confidence            876 22                          234468999999999998888888887777654    56888888888


Q ss_pred             HHHHHHHHHHHHhhcCCC-----cccccchh-hHHHHHHHHHHhhhHHHHH---HHHHHhccCcceeeecchhHHHHHHH
Q 017672          232 FSCIQSAFWAVAAERNPS-----AWKLGWDI-HLVSVVYCGLVINGITYWI---QVWAIEKKGPVFIAIFTPFALIITAI  302 (368)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~-~~~~l~~~gi~~~~i~~~l---~~~a~~~~~a~~~~~~~~~~pv~~~i  302 (368)
                      ...+.++|..+..|+...     .+...+.. .+..+..++. ++..++.+   -+..+.+++....++.+...-+-+.+
T Consensus       207 ~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l-~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~  285 (349)
T KOG1443|consen  207 WMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISL-GGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLL  285 (349)
T ss_pred             HHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHH-HHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHH
Confidence            888888888888887632     12222211 2222222222 33344433   33457888999999999999999999


Q ss_pred             HHHHHhcccccchhHhHHHHHHHHHHHh
Q 017672          303 FSAFLWKETLHWGSVGGAVLLVGGLYSV  330 (368)
Q Consensus       303 ~~~~~~~e~~~~~~~~G~~lii~gi~~~  330 (368)
                      ++.++.+|.++...|.|..+...|+.++
T Consensus       286 la~ii~~d~ls~lN~~Gl~i~~agi~~~  313 (349)
T KOG1443|consen  286 LAIIILKDQLSLLNWLGLAICLAGILLH  313 (349)
T ss_pred             HHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999988

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.68  E-value=1.1e-13  Score=124.78  Aligned_cols=299  Identities=15%  Similarity=0.155  Sum_probs=214.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhcC---CChHHHHHHHHHHHHHHHHHHHhhhhcc----CCCCC------CHHHHHH
Q 017672           15 KPYIAMIFVQFAYAGMALFSKAAIAKG---MNPFVFVVYRQAFASLALSPFAFFLESQ----NASPL------SYSSVCK   81 (368)
Q Consensus        15 ~~~~~~~l~~~~~~~~~~~~k~~~~~g---~~~~~~~~~r~~~~~l~l~~~~~~~~~~----~~~~~------~~~~~~~   81 (368)
                      .-.+.+++..+.++...+..|+....+   ..|...+++--.+-.+++....+...+.    ..+.+      .+++..+
T Consensus        15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk   94 (345)
T KOG2234|consen   15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK   94 (345)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence            556777788899999999999988765   6788888888887777777776655321    11111      2345666


Q ss_pred             HHHHHHHHHHHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcC
Q 017672           82 IFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKG  161 (368)
Q Consensus        82 ~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~  161 (368)
                      +.+-+++ .+..+.++|.++.+.+++..++..++..+.|+++..+++++|++++      ||.++++.++|+.++.....
T Consensus        95 ~~vPa~i-YalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~------Qw~Al~lL~~Gv~~vQ~~~~  167 (345)
T KOG2234|consen   95 VSVPALI-YALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRL------QWMALVLLFAGVALVQLPSL  167 (345)
T ss_pred             HHHHHHH-HHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHH------HHHHHHHHHHHHHHHhccCC
Confidence            6666666 4677779999999999999999999999999999999999999999      99999999999999963212


Q ss_pred             CCCCCCCCChhhhhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcc-hhHHHHHHHHHHHHHHH
Q 017672          162 PPLRFLNWYPEIQKQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKV-RLTTLQCFFSCIQSAFW  240 (368)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  240 (368)
                      +.                .+..+.....+...|....+.+++..+...+.-+|..|+.+.+. ..+....+++.+..+..
T Consensus       168 ~~----------------~~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~  231 (345)
T KOG2234|consen  168 SP----------------TGAKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLT  231 (345)
T ss_pred             CC----------------CCccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHH
Confidence            11                01111234567789999999999999999999999998755333 33334444444444444


Q ss_pred             HHHhhcCCCcccccchhhHHHHHHHHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHH
Q 017672          241 AVAAERNPSAWKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGA  320 (368)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~  320 (368)
                      .+..+.+...|. .--..|-...+..++....+-.+...-+|+.+-..=+....+..+++.+.++.++|-+||....+|+
T Consensus       232 ~~~~d~~~i~~~-gff~G~s~~vw~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~  310 (345)
T KOG2234|consen  232 ILLQDGEAINEY-GFFYGYSSIVWLVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGA  310 (345)
T ss_pred             HhhccccccccC-CccccccHHHHHHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHH
Confidence            433322211111 1112233333344444445555666667777776667777789999999999999999999999999


Q ss_pred             HHHHHHHHHhhcccccc
Q 017672          321 VLLVGGLYSVLWGKNRE  337 (368)
Q Consensus       321 ~lii~gi~~~~~~~~~~  337 (368)
                      .+++.++.++...+++.
T Consensus       311 ~lVi~Si~lY~~~P~~~  327 (345)
T KOG2234|consen  311 LLVILSIFLYSLYPARD  327 (345)
T ss_pred             HHHHHHHHHhhcCCccc
Confidence            99999999998544443

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.65  E-value=9.9e-16  Score=117.03  Aligned_cols=135  Identities=19%  Similarity=0.191  Sum_probs=120.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCC-CCCHHHHHHHHHHHHHHHHHH
Q 017672           15 KPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNAS-PLSYSSVCKIFLVSLFGLTLS   93 (368)
Q Consensus        15 ~~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~   93 (368)
                      ...+++++++++||...++.|...+. ++|...++.|..+...++..++...++...+ ..+.|.|..+.+.|+. ...+
T Consensus         3 ~~~~~ALLsA~fa~L~~iF~KIGl~~-vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla-~gls   80 (140)
T COG2510           3 AAIIYALLSALFAGLTPIFAKIGLEG-VDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLA-GGLS   80 (140)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhccc-cCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHH-HHHH
Confidence            46789999999999999999999996 9999999999999999998888776654332 2467888888887755 4888


Q ss_pred             HHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHh
Q 017672           94 LNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFA  157 (368)
Q Consensus        94 ~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~  157 (368)
                      +.+||.|++...++...++-.+.|+++++++++|+|||++..      +++|+.++.+|++++.
T Consensus        81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~------~~iG~~LI~~Gailvs  138 (140)
T COG2510          81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLP------TWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHH------HHHHHHHHHhCeeeEe
Confidence            999999999999999999999999999999999999999999      9999999999998874

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.62  E-value=3.1e-16  Score=133.68  Aligned_cols=284  Identities=15%  Similarity=0.158  Sum_probs=211.2

Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHH
Q 017672           12 ASQKPYIAMIFVQFAYAGMALFSKAAIAKGMN-PFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGL   90 (368)
Q Consensus        12 ~~~~~~~~~~l~~~~~~~~~~~~k~~~~~g~~-~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   90 (368)
                      |..+++.+-=+-.++-..+...+..+.+.|.+ |....|+.+..-+++-.++..+|++  .   -...|+.++++++...
T Consensus        15 k~li~~~LGQiLSL~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~~--~---~~~~~~hYilla~~DV   89 (336)
T KOG2766|consen   15 KTLIGLGLGQILSLLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRRK--Y---IKAKWRHYILLAFVDV   89 (336)
T ss_pred             hhhheeeHHHHHHHHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhhH--H---HHHHHHHhhheeEEee
Confidence            34444444444444444455555555555444 7788899998888888888776542  1   2345666888887765


Q ss_pred             HHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCCCC
Q 017672           91 TLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWY  170 (368)
Q Consensus        91 ~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~~~  170 (368)
                      -.++ +-..|.||++...+.++-......+.+++|+|+|.|-++.      ++.|+.+++.|+.++.+.+=         
T Consensus        90 EaNy-~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlm------ki~gV~iCi~GvvmvV~sDV---------  153 (336)
T KOG2766|consen   90 EANY-FVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLM------KISGVVICIVGVVMVVFSDV---------  153 (336)
T ss_pred             cccE-EEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhh------eeeeEEeEecceEEEEEeee---------
Confidence            5554 7788999999999999999988999999999999999999      99999999999999876311         


Q ss_pred             hhhhhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCCCc
Q 017672          171 PEIQKQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSA  250 (368)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (368)
                               ++ .+..+..+..+|++++++++-+||+.++..+.+.++.+. .+.+....++|.++..+-. ..+... .
T Consensus       154 ---------~a-gd~aggsnp~~GD~lvi~GATlYaVSNv~EEflvkn~d~-~elm~~lgLfGaIIsaIQ~-i~~~~~-~  220 (336)
T KOG2766|consen  154 ---------HA-GDRAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVKNADR-VELMGFLGLFGAIISAIQF-IFERHH-V  220 (336)
T ss_pred             ---------cc-ccccCCCCCccCcEEEEecceeeeeccccHHHHHhcCcH-HHHHHHHHHHHHHHHHHHH-hhhccc-e
Confidence                     11 122245666799999999999999999999999999875 8888888999999888764 433321 1


Q ss_pred             ccccchhhHHHHHHHHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHh
Q 017672          251 WKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSV  330 (368)
Q Consensus       251 ~~~~~~~~~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~  330 (368)
                      ....++......+. ..++..+-|.+.-..+|..+++..++-..+.-.+++++  ..||-+.+|..++..+.+..|.+++
T Consensus       221 ~tl~w~~~i~~yl~-f~L~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiY  297 (336)
T KOG2766|consen  221 STLHWDSAIFLYLR-FALTMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIY  297 (336)
T ss_pred             eeEeehHHHHHHHH-HHHHHHHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEe
Confidence            12222222222222 44566666777777889999999999999999999988  6788889999999999999999888


Q ss_pred             hc
Q 017672          331 LW  332 (368)
Q Consensus       331 ~~  332 (368)
                      ..
T Consensus       298 s~  299 (336)
T KOG2766|consen  298 ST  299 (336)
T ss_pred             ec
Confidence            44

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.62  E-value=1.6e-14  Score=126.61  Aligned_cols=265  Identities=13%  Similarity=0.147  Sum_probs=205.7

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccChhhhhhcccchhHHHHH
Q 017672           43 NPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFV  122 (368)
Q Consensus        43 ~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~l  122 (368)
                      ++..+.+.+-+++.++-..+...++++..   .++.+..+...++.+ .....|.|.|++|++-..-.+-.++..+-+++
T Consensus        50 ~~~fL~~~q~l~~~~~s~~~l~~~k~~~~---~~apl~~y~~is~tn-~~s~~~~yeaLKyvSyPtq~LaKscKmIPVml  125 (327)
T KOG1581|consen   50 HSLFLVFCQRLVALLVSYAMLKWWKKELS---GVAPLYKYSLISFTN-TLSSWCGYEALKYVSYPTQTLAKSCKMIPVML  125 (327)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhcccccCC---CCCchhHHhHHHHHh-hcchHHHHHHHHhccchHHHHHHHhhhhHHHH
Confidence            57788888888887777555444333322   245566677777776 45556999999999999999999999999999


Q ss_pred             HHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCCCChhhhhcccCCCCCCCCCCchhHHHHHHHHHHH
Q 017672          123 LAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYPEIQKQVSESSPTNDCPIGRWIKGALIMISAN  202 (368)
Q Consensus       123 l~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~  202 (368)
                      ++.++.|.|.+..      +++...++..|+.+....+.++                  ..++....+...|+.+.....
T Consensus       126 mg~Lvy~~ky~~~------eYl~~~LIs~GvsiF~l~~~s~------------------s~~~~g~~ns~~G~~Ll~~~L  181 (327)
T KOG1581|consen  126 MGTLVYGRKYSSF------EYLVAFLISLGVSIFSLFPNSD------------------SSSKSGRENSPIGILLLFGYL  181 (327)
T ss_pred             HHHHHhcCccCcH------HHHHHHHHHhheeeEEEecCCC------------------CccccCCCCchHhHHHHHHHH
Confidence            9999988888888      9999999999999998753321                  112224456789999999999


Q ss_pred             HHHHHHHHHHHHhhhhCC-CcchhHHHHHHHHHHHHHHHHHHhhcCCCccc--ccchhhHHHHHHHHHHhhhHHHHHHHH
Q 017672          203 TAWSLWLVLQGYIIKQYP-AKVRLTTLQCFFSCIQSAFWAVAAERNPSAWK--LGWDIHLVSVVYCGLVINGITYWIQVW  279 (368)
Q Consensus       203 ~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~gi~~~~i~~~l~~~  279 (368)
                      ++-+..+..++++.+++. .++..+++.++++.+......+......+...  ...+..+.-++.... ++.+++.+.++
T Consensus       182 ~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~-~gavGQ~FI~~  260 (327)
T KOG1581|consen  182 LFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYST-CGAVGQLFIFY  260 (327)
T ss_pred             HHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHH-hhhhhhheehh
Confidence            999999999999988765 45789999999999988877433222211111  111122334444444 67799999999


Q ss_pred             HHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhhccccc
Q 017672          280 AIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWGKNR  336 (368)
Q Consensus       280 a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~~~~~~  336 (368)
                      -+++.|+..-+.+..++-+++++++.+.+|.+.++.||.|..+++.|+.+-...+.+
T Consensus       261 TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~  317 (327)
T KOG1581|consen  261 TIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK  317 (327)
T ss_pred             hHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999999999999988766655

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.62  E-value=2.9e-14  Score=126.61  Aligned_cols=229  Identities=15%  Similarity=0.136  Sum_probs=168.7

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHH
Q 017672           75 SYSSVCKIFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGAL  154 (368)
Q Consensus        75 ~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~  154 (368)
                      ++++..++.+-+++ ...++.+.+.++++++++..+++.++..+++++++.+++|+|++.+      ||.++.+.++|++
T Consensus        13 ~~~~~~~~~vPA~l-Y~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~------qW~aL~lL~~Gv~   85 (244)
T PF04142_consen   13 SPKDTLKLAVPALL-YAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRR------QWLALFLLVAGVV   85 (244)
T ss_pred             hHHHHHHHHHHHHH-HHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchh------hHHHHHHHHHHHh
Confidence            36778888888877 4777779999999999999999999999999999999999999999      9999999999999


Q ss_pred             HHhhhcCCCCCCCCCChhhhhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCC-cchhHHHHHHHH
Q 017672          155 VFAFVKGPPLRFLNWYPEIQKQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPA-KVRLTTLQCFFS  233 (368)
Q Consensus       155 li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~  233 (368)
                      ++...+....+..+          ++....+....+...|+++.+.++++.|+..+..+|..|+.+. .+..+......+
T Consensus        86 lv~~~~~~~~~~~~----------~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~g  155 (244)
T PF04142_consen   86 LVQLSSSQSSDNSS----------SSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFG  155 (244)
T ss_pred             eeecCCcccccccc----------ccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHH
Confidence            98642211100000          0000011134556799999999999999999999999998753 244555555566


Q ss_pred             HHHHHHHHHHhhcC-CCcccccchhhHHHHHHHHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccc
Q 017672          234 CIQSAFWAVAAERN-PSAWKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETL  312 (368)
Q Consensus       234 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~  312 (368)
                      .+..++.....+.+ ..+....  ..+-...+..++...++=++....+|+.+...=+.....+.+++.++++++||.++
T Consensus       156 i~~~~~~~~~~~~~~~~~~g~f--~G~~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~  233 (244)
T PF04142_consen  156 ILFNLLALLLSDGSAISESGFF--HGYSWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPP  233 (244)
T ss_pred             HHHHHHHHhcccccccccCCch--hhcchHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence            66655554333222 1111111  22223344444555566667778899999999999999999999999999999999


Q ss_pred             cchhHhHHHH
Q 017672          313 HWGSVGGAVL  322 (368)
Q Consensus       313 ~~~~~~G~~l  322 (368)
                      +....+|+.+
T Consensus       234 s~~f~lg~~~  243 (244)
T PF04142_consen  234 SLSFLLGAAL  243 (244)
T ss_pred             chHHhhheec
Confidence            9999999865

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.59  E-value=1.6e-12  Score=115.64  Aligned_cols=293  Identities=13%  Similarity=0.088  Sum_probs=220.4

Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHhc-CCChHHHH--HHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHH
Q 017672           12 ASQKPYIAMIFVQFAYAGMALFSKAAIAK-GMNPFVFV--VYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLF   88 (368)
Q Consensus        12 ~~~~~~~~~~l~~~~~~~~~~~~k~~~~~-g~~~~~~~--~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   88 (368)
                      +...+...++.-.+.--.+.+..|.+... +.+ ..+.  .++.+.+.+.+...-..+- -+.++++++..++.+...++
T Consensus         9 ~~~~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~-~~l~l~~~Q~l~s~~~v~~lk~~~l-v~~~~l~~~~~kk~~P~~~l   86 (314)
T KOG1444|consen    9 KQSSPLLSALFYCLSSILMTVVNKIVLSSYNFP-MGLLLMLLQSLASVLVVLVLKRLGL-VNFRPLDLRTAKKWFPVSLL   86 (314)
T ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCc-HHHHHHHHHHHHHHHHHHHHHHhce-eecCCcChHHHHHHccHHHH
Confidence            44455666666666666778888987765 333 3333  4788777766665443332 23566778888888877777


Q ss_pred             HHHHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCC
Q 017672           89 GLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLN  168 (368)
Q Consensus        89 ~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~  168 (368)
                      - .++...-..+++|.++...+++....|+++++....++|.|++.+      .+.++...++|.......         
T Consensus        87 f-~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~------v~~Sv~~m~~~s~~~~~~---------  150 (314)
T KOG1444|consen   87 F-VGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNK------VWASVFAMIIGSVAAAFT---------  150 (314)
T ss_pred             H-HHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhh------HHHHHHHHHHHHHhhccc---------
Confidence            4 566667788999999999999999999999999999999777777      999999998888887541         


Q ss_pred             CChhhhhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCC-CcchhHHHHHHHHHHHHHHHHHHhhcC
Q 017672          169 WYPEIQKQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYP-AKVRLTTLQCFFSCIQSAFWAVAAERN  247 (368)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (368)
                                        +......|+.+++...+..+.+.+..|+..+..+ +.+...++..+.+.+......+++++.
T Consensus       151 ------------------d~sf~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~  212 (314)
T KOG1444|consen  151 ------------------DLSFNLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGEL  212 (314)
T ss_pred             ------------------cceecchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcch
Confidence                              1222345999999999999999999999876544 457899999999999888888666542


Q ss_pred             CC---cc-cccchhhHHHHHHHHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHH
Q 017672          248 PS---AW-KLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLL  323 (368)
Q Consensus       248 ~~---~~-~~~~~~~~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~li  323 (368)
                      ..   +. .......+..+...++++.++.| +-.+..+..++...++++..+...+.+-..++++++.++..++|..+-
T Consensus       213 ~~l~~~~~~~~~~~~~~~~~lScv~gf~isy-~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~  291 (314)
T KOG1444|consen  213 DALSLNFDNWSDSSVLVVMLLSCVMGFGISY-TSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVG  291 (314)
T ss_pred             HHHHhhcccccchhHHHHHHHHHHHHHHHHH-HHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHH
Confidence            10   11 01122345666666666655555 778899999999999999888888888888888999999999999999


Q ss_pred             HHHHHHhhccccccchhc
Q 017672          324 VGGLYSVLWGKNREERIN  341 (368)
Q Consensus       324 i~gi~~~~~~~~~~~~~~  341 (368)
                      +.|..++.+.+.++++.+
T Consensus       292 ~~ggv~Y~~~~~~~k~~~  309 (314)
T KOG1444|consen  292 FFGGVLYSYATFRKKKQP  309 (314)
T ss_pred             hhhhhHHhhhhhhhccCC
Confidence            999998888776554443

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.59  E-value=4.3e-14  Score=108.14  Aligned_cols=136  Identities=14%  Similarity=0.092  Sum_probs=116.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCCCcccccchhhHHHHHHHHHHhhhH
Q 017672          193 KGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAWKLGWDIHLVSVVYCGLVINGI  272 (368)
Q Consensus       193 ~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~i  272 (368)
                      ...++++++++++++..++.|-..++.++ ...++.+.....+.+..+.....+. +.....+...|..+++.|+ .+++
T Consensus         3 ~~~~~ALLsA~fa~L~~iF~KIGl~~vdp-~~At~IRtiVi~~~l~~v~~~~g~~-~~~~~~~~k~~lflilSGl-a~gl   79 (140)
T COG2510           3 AAIIYALLSALFAGLTPIFAKIGLEGVDP-DFATTIRTIVILIFLLIVLLVTGNW-QAGGEIGPKSWLFLILSGL-AGGL   79 (140)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhccccCc-cHHHHHHHHHHHHHHHHHHHhcCce-ecccccCcceehhhhHHHH-HHHH
Confidence            35789999999999999999999998875 8888899888888777766554332 2221234567888888885 8889


Q ss_pred             HHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhh
Q 017672          273 TYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVL  331 (368)
Q Consensus       273 ~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~  331 (368)
                      +..+|++|++..+++++..+..++|++++++++++++|+++..+++|+++|++|.+++.
T Consensus        80 swl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          80 SWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            99999999999999999999999999999999999999999999999999999987764

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.54  E-value=2.4e-14  Score=114.23  Aligned_cols=125  Identities=22%  Similarity=0.398  Sum_probs=110.9

Q ss_pred             HHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 017672           25 FAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTLSLNLYYVAINYT  104 (368)
Q Consensus        25 ~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~  104 (368)
                      ++||...++.|...++ .||....++|+..+.+ ++++....+++...+.+++++......+.++...++.+++++++++
T Consensus         1 ~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~   78 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKK-ISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYI   78 (126)
T ss_pred             ceeeeHHHHHHHHhcc-CCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhc
Confidence            4799999999999998 9999999999999998 6665555554434556678888888889887788899999999999


Q ss_pred             ChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHh
Q 017672          105 TATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFA  157 (368)
Q Consensus       105 ~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~  157 (368)
                      +++.++++.++.|+++.+++++++||+++++      +++|+++++.|+.++.
T Consensus        79 ~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~------~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   79 SASIVSILQYLSPVFAAILGWLFLGERPSWR------QIIGIILIIIGVVLIS  125 (126)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999      9999999999999874

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.44  E-value=3.5e-13  Score=107.47  Aligned_cols=125  Identities=16%  Similarity=0.350  Sum_probs=107.3

Q ss_pred             HHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCCCcccccchhhHHHHHHHHHHhhhHHHHHHHHHHh
Q 017672          203 TAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAWKLGWDIHLVSVVYCGLVINGITYWIQVWAIE  282 (368)
Q Consensus       203 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~i~~~l~~~a~~  282 (368)
                      ++||.+.+..|+..++.++ ....++++..+.+ .++.....+...  ....+...+...++.+++++.+++.+++++++
T Consensus         1 ~~~a~~~~~~k~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~   76 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKKISP-LSITFWRFLIAGI-LLILLLILGRKP--FKNLSPRQWLWLLFLGLLGTALAYLLYFYALK   76 (126)
T ss_pred             ceeeeHHHHHHHHhccCCH-HHHHHHHHHHHHH-HHHHHHhhcccc--ccCCChhhhhhhhHhhccceehHHHHHHHHHH
Confidence            4689999999999998765 9999999999998 666555544432  22334466778888898888999999999999


Q ss_pred             ccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhh
Q 017672          283 KKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVL  331 (368)
Q Consensus       283 ~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~  331 (368)
                      +.+++.++.+.+++|+++.++++++++|++++.+++|+++++.|+++..
T Consensus        77 ~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   77 YISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999988764

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.42  E-value=1e-11  Score=107.70  Aligned_cols=279  Identities=15%  Similarity=0.149  Sum_probs=194.5

Q ss_pred             HHHHHHHHHHHHHHh---cC----CChHHHHHHHHHHHHHHHHHHHhhhhccCCCCC-------------CHHHHHHHHH
Q 017672           25 FAYAGMALFSKAAIA---KG----MNPFVFVVYRQAFASLALSPFAFFLESQNASPL-------------SYSSVCKIFL   84 (368)
Q Consensus        25 ~~~~~~~~~~k~~~~---~g----~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~-------------~~~~~~~~~~   84 (368)
                      ..-+++.+..|++-+   +|    -+|+..+..-++.-++++..+.+.+.+...+..             +.+.. .++.
T Consensus        13 vsGs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~-lfl~   91 (372)
T KOG3912|consen   13 VSGSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPV-LFLP   91 (372)
T ss_pred             hhccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcc-eecC
Confidence            344567888888653   22    247777777787777787777765544322210             01111 1222


Q ss_pred             HHHHHHHHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCC
Q 017672           85 VSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPL  164 (368)
Q Consensus        85 ~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~  164 (368)
                      -+++- .....+.|.|+++++++..+++.....+|+.+++-.+++.+++.+      ||+|+....+|++++...+-   
T Consensus        92 Pal~D-i~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~------qWl~i~fv~lGlviVg~~d~---  161 (372)
T KOG3912|consen   92 PALCD-IAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGR------QWLGILFVSLGLVIVGSLDV---  161 (372)
T ss_pred             hHHHH-HhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchh------hHHHHHHHHhhhheeeeeec---
Confidence            44454 445558889999999999999999999999999999999999999      99999999999999864210   


Q ss_pred             CCCCCChhhhhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCC-CcchhHHHHHHHHHHHHHHHHHH
Q 017672          165 RFLNWYPEIQKQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYP-AKVRLTTLQCFFSCIQSAFWAVA  243 (368)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  243 (368)
                      .              ...+.-+.-++...|+++.++|-+.-|+.+++.+|..++.+ +|.....+.-+++.+....++..
T Consensus       162 ~--------------~~~~p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~  227 (372)
T KOG3912|consen  162 H--------------LVTDPYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIP  227 (372)
T ss_pred             c--------------cccCCccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHH
Confidence            0              00001112355678999999999999999999999888776 67899999999997665555544


Q ss_pred             hhcCCC--ccc------ccch---------hhHHHHHHHHHHhhhHHHHHHH----HHHhccCcceeeecchhHHHHHHH
Q 017672          244 AERNPS--AWK------LGWD---------IHLVSVVYCGLVINGITYWIQV----WAIEKKGPVFIAIFTPFALIITAI  302 (368)
Q Consensus       244 ~~~~~~--~~~------~~~~---------~~~~~l~~~gi~~~~i~~~l~~----~a~~~~~a~~~~~~~~~~pv~~~i  302 (368)
                      ...-+.  .+.      ..+.         .....+...|.   .++..+++    +-.|..+++.-..+..++..+.-+
T Consensus       228 m~yi~~~~sfS~~~~g~~eD~~~~~~~~~e~p~l~val~~~---~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv  304 (372)
T KOG3912|consen  228 MYYIPSGDSFSCNPRGVLEDWGDAFAALQESPSLAVALIGF---TVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWV  304 (372)
T ss_pred             HhheecCCcCcCCCCcchhhHHHHHHHhcCCchhHHHHhhh---hhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhH
Confidence            322110  000      0010         11122233333   23333333    235667888888999999999999


Q ss_pred             HHHHHhcccccchhHhHHHHHHHHHHHhh
Q 017672          303 FSAFLWKETLHWGSVGGAVLLVGGLYSVL  331 (368)
Q Consensus       303 ~~~~~~~e~~~~~~~~G~~lii~gi~~~~  331 (368)
                      ++.....|.++..|+.|.++.+.|++++.
T Consensus       305 ~si~m~~E~f~llqilGFliLi~Gi~lY~  333 (372)
T KOG3912|consen  305 FSIAMGWEYFHLLQILGFLILIMGIILYN  333 (372)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999885

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=99.39  E-value=5.8e-12  Score=109.06  Aligned_cols=263  Identities=10%  Similarity=0.065  Sum_probs=178.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccc-cChhhhhhcccchhHHHHHH
Q 017672           45 FVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTLSLNLYYVAINY-TTATFAAATTNTIPAITFVL  123 (368)
Q Consensus        45 ~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~-~~~~~~~~i~~~~p~~~~ll  123 (368)
                      -.+++.++++.+.--+++.--. ....++++.|++...+.   + +...+.+-++++++ .+...--++.+-.++.++++
T Consensus        34 NLITFaqFlFia~eGlif~skf-~~~k~kiplk~Y~i~V~---m-FF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~  108 (330)
T KOG1583|consen   34 NLITFAQFLFIATEGLIFTSKF-FTVKPKIPLKDYAITVA---M-FFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMIL  108 (330)
T ss_pred             eehHHHHHHHHHHhceeeeccc-cccCCCCchhhhheehh---e-eeeeeeeccceeeecccceEEEEEecCcHHHHHHH
Confidence            4567777777766655543100 11234555676665543   2 23345577789988 66677778889999999999


Q ss_pred             HHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCCCChhhhhcccCCCCCCCCCCchhHHHHHHHHHHHH
Q 017672          124 AGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYPEIQKQVSESSPTNDCPIGRWIKGALIMISANT  203 (368)
Q Consensus       124 ~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~  203 (368)
                      ++++.|.|-+.+      |+.++.+..+|+++.++.+.++.+.        ..++=..++.......+..|+.+...|.+
T Consensus       109 g~il~~k~Ys~~------Qy~Sv~~iTiGiiIcTl~s~~d~~~--------~~~~l~~~~~~~~~~~w~iGi~lL~~al~  174 (330)
T KOG1583|consen  109 GWILLGKRYSLR------QYSSVLMITIGIIICTLFSSKDGRS--------KLSGLDSGSAQSDFFWWLIGIALLVFALL  174 (330)
T ss_pred             HHHhccceeehh------hhhhHHhhhhhheeEEeecCcchhh--------hhcccccCcccccchHHHHHHHHHHHHHH
Confidence            999977777777      9999999999999998765443221        11111222233345677899999999999


Q ss_pred             HHHHHHHHHHHhhhhCC-CcchhHHHHHHHHHHHHHHHHHH--------hhcC---CCcccccchhhHHHHHHHHHHhhh
Q 017672          204 AWSLWLVLQGYIIKQYP-AKVRLTTLQCFFSCIQSAFWAVA--------AERN---PSAWKLGWDIHLVSVVYCGLVING  271 (368)
Q Consensus       204 ~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--------~~~~---~~~~~~~~~~~~~~l~~~gi~~~~  271 (368)
                      ..|...+.++...+++. ++-+.+++..+.+....+...--        ...+   .+......+..|..+     +.++
T Consensus       175 ~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yL-----l~n~  249 (330)
T KOG1583|consen  175 LSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYL-----LFNV  249 (330)
T ss_pred             HHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHH-----HHHH
Confidence            99999999998888777 55688888888777655543200        0000   001111111233333     2344


Q ss_pred             HHHHHHHHHH----hccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhh
Q 017672          272 ITYWIQVWAI----EKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVL  331 (368)
Q Consensus       272 i~~~l~~~a~----~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~  331 (368)
                      +.++.-..++    .+.++-.++++..++..++.+++.++|+.+++++.|+|+.+++.|.+++.
T Consensus       250 L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa  313 (330)
T KOG1583|consen  250 LTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFA  313 (330)
T ss_pred             HHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHH
Confidence            4555554443    44567788899999999999999999999999999999999999987765

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.39  E-value=1e-12  Score=113.53  Aligned_cols=269  Identities=13%  Similarity=0.074  Sum_probs=196.1

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHhhhhcc----CCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHhccccChhhhhhcccch
Q 017672           43 NPFVFVVYRQAFASLALSPFAFFLESQ----NASP--LSYSSVCKIFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTI  116 (368)
Q Consensus        43 ~~~~~~~~r~~~~~l~l~~~~~~~~~~----~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~  116 (368)
                      .|..+.+++.++...+...+.....+-    ..++  ++.+.-+.++-+.+.- .+....-+.+++|++++...+-.++.
T Consensus        60 ~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVf-i~mI~fnnlcL~yVgVaFYyvgRsLt  138 (347)
T KOG1442|consen   60 APLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVF-ILMISFNNLCLKYVGVAFYYVGRSLT  138 (347)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhhee-eeehhccceehhhcceEEEEeccchh
Confidence            378888999988888777766543331    1222  3444444444444432 33344556899999999999999999


Q ss_pred             hHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCCCChhhhhcccCCCCCCCCCCchhHHHHH
Q 017672          117 PAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYPEIQKQVSESSPTNDCPIGRWIKGAL  196 (368)
Q Consensus       117 p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~  196 (368)
                      .+|+.++.++++|+|-+..      -..+..+++.|..+=.-.+|.                        ...-...|.+
T Consensus       139 tvFtVlLtyvllkqkTs~~------~~~~C~lIi~GF~lGvdqE~~------------------------~~~ls~~Gvi  188 (347)
T KOG1442|consen  139 TVFTVLLTYVLLKQKTSFF------ALGCCLLIILGFGLGVDQEGS------------------------TGTLSWIGVI  188 (347)
T ss_pred             hhHHHHhHHhhcccccccc------cceeehhheehheeccccccc------------------------cCccchhhhH
Confidence            9999999999999998888      777777777766554321110                        2334468999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhCCC-cchhHHHHHHHHHHHHHHHHHHhhcCCCccc---ccchhhHHHHHHHHHHhhhH
Q 017672          197 IMISANTAWSLWLVLQGYIIKQYPA-KVRLTTLQCFFSCIQSAFWAVAAERNPSAWK---LGWDIHLVSVVYCGLVINGI  272 (368)
Q Consensus       197 ~~l~a~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~gi~~~~i  272 (368)
                      +.+.|.++-|+..+..||......+ -+.++++.+..+.++++|...+.+.-...+.   .+....|..+.+.|+++..+
T Consensus       189 fGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~m  268 (347)
T KOG1442|consen  189 FGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAM  268 (347)
T ss_pred             HHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999987654442 4688999999999999998866543222221   22334566666667665555


Q ss_pred             HHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhhccccccchhccc
Q 017672          273 TYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWGKNREERINKI  343 (368)
Q Consensus       273 ~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~~~~~~~~~~~~~  343 (368)
                      +| .-.+-+|-.+|..-++-....-..-.+++..+++|.-+..-|.|-.++++|...+.+.|.++.+++..
T Consensus       269 gy-vTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~~~~  338 (347)
T KOG1442|consen  269 GY-VTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRKASA  338 (347)
T ss_pred             hh-eeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHhhcc
Confidence            44 33455888999999999988889999999999999999999999999999999999887776655433

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.32  E-value=3.7e-11  Score=108.52  Aligned_cols=134  Identities=18%  Similarity=0.283  Sum_probs=115.0

Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCh--HHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHH
Q 017672           12 ASQKPYIAMIFVQFAYAGMALFSKAAIAKGMNP--FVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFG   89 (368)
Q Consensus        12 ~~~~~~~~~~l~~~~~~~~~~~~k~~~~~g~~~--~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   89 (368)
                      ...+|.+++++++++|+......|...++ .++  .....+++.++.+++.++.+..++..  ..+.+++...+..++++
T Consensus       125 ~~~~G~~~~l~a~~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~  201 (260)
T TIGR00950       125 INPAGLLLGLGSGISFALGTVLYKRLVKK-EGPELLQFTGWVLLLGALLLLPFAWFLGPNP--QALSLQWGALLYLGLIG  201 (260)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHhHHhhc-CCchHHHHHHHHHHHHHHHHHHHHHhcCCCC--CcchHHHHHHHHHHHHH
Confidence            45689999999999999999999998875 664  45555789999998888876544322  23567777788888888


Q ss_pred             HHHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHH
Q 017672           90 LTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGAL  154 (368)
Q Consensus        90 ~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~  154 (368)
                      ...++.++++++++.+++.++.+.++.|+++.++++++++|+++..      +++|..+.+.|++
T Consensus       202 ~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~------~~~G~~li~~g~~  260 (260)
T TIGR00950       202 TALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLP------QLIGGALIIAAVL  260 (260)
T ss_pred             HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHhcC
Confidence            8889999999999999999999999999999999999999999999      9999999999863

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.29  E-value=2.7e-11  Score=101.68  Aligned_cols=277  Identities=12%  Similarity=0.093  Sum_probs=193.2

Q ss_pred             HHHHHHHHHhc-CCC-hHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccChh
Q 017672           30 MALFSKAAIAK-GMN-PFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTLSLNLYYVAINYTTAT  107 (368)
Q Consensus        30 ~~~~~k~~~~~-g~~-~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~  107 (368)
                      +....|+..+. |.+ .+.+++.+.+++.+-+.++-+.+..+.+ .-+.+.|...-++-+..+    ..--.+++|.++.
T Consensus        21 mTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR-~t~aK~WfpiSfLLv~MI----yt~SKsLqyL~vp   95 (309)
T COG5070          21 MTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEFR-LTKAKKWFPISFLLVVMI----YTSSKSLQYLAVP   95 (309)
T ss_pred             HHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhhee-hhhhhhhcCHHHHHHHHH----Hhcccceeeeeee
Confidence            34455665543 333 3455677777666655555443332222 112344444332222222    2334899999999


Q ss_pred             hhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCCCChhhhhcccCCCCCCCCC
Q 017672          108 FAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYPEIQKQVSESSPTNDCP  187 (368)
Q Consensus       108 ~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (368)
                      ..+++.++..+.++.....+++.|++..      +..+.++.++.-....+.+.+.           .         ...
T Consensus        96 iYTiFKNltII~iAygEvl~Fgg~vtsl------~l~SFilMvlSS~va~w~D~q~-----------~---------~~~  149 (309)
T COG5070          96 IYTIFKNLTIILIAYGEVLFFGGRVTSL------ELLSFILMVLSSVVATWGDQQA-----------S---------AFK  149 (309)
T ss_pred             HHHHhccceeehhHhhHHHHhcCccchh------hHHHHHHHHHHHHHhccchhhH-----------H---------HHH
Confidence            9999999999999999999999999999      9999999888888776532110           0         002


Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCC-CcchhHHHHHHHHHHHHHHHHHHhhcCCCc-ccccch-hhHHHHHH
Q 017672          188 IGRWIKGALIMISANTAWSLWLVLQGYIIKQYP-AKVRLTTLQCFFSCIQSAFWAVAAERNPSA-WKLGWD-IHLVSVVY  264 (368)
Q Consensus       188 ~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~l~~  264 (368)
                      .+..+.|++++...++..+.+....|+..+-.+ .....+++.+..+..+++.+.++.|+..+. .....+ -...++..
T Consensus       150 ~~~lN~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~I  229 (309)
T COG5070         150 AQILNPGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFI  229 (309)
T ss_pred             hcccCCceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHH
Confidence            235568999999999999999999988765322 237889999999999999988887664221 111111 22445555


Q ss_pred             HHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhhccccccc
Q 017672          265 CGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWGKNREE  338 (368)
Q Consensus       265 ~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~~~~~~~~  338 (368)
                      .|+..-+++ ++-.|.++..+.+..++++.++..-..+-|.++|+|+.+..++....+-..+..++...+.+++
T Consensus       230 Sgl~svgiS-y~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~  302 (309)
T COG5070         230 SGLCSVGIS-YCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQ  302 (309)
T ss_pred             HHHHHhhhh-hccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            666444444 4778999999999999999999999999999999999999999998888777666665554443

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=99.23  E-value=5.4e-09  Score=92.72  Aligned_cols=252  Identities=14%  Similarity=0.121  Sum_probs=169.7

Q ss_pred             CChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCC--HHHHHHHHHHHHHHHHHHHHHHHHhccccChhhhhhccc-chhH
Q 017672           42 MNPFVFVVYRQAFASLALSPFAFFLESQNASPLS--YSSVCKIFLVSLFGLTLSLNLYYVAINYTTATFAAATTN-TIPA  118 (368)
Q Consensus        42 ~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~-~~p~  118 (368)
                      -+|.+..+.-.+-+.++- .......+   |..+  .+.+..-++.|++- ...+..++.+.++.+++.+-++.. +.-+
T Consensus        10 G~~~~Q~lG~t~Gali~a-lv~~~~~~---p~~~~~~~~~~~~~lsG~~W-~iGq~~qf~s~~~~GVS~tmPiStg~QLv   84 (269)
T PF06800_consen   10 GKPANQILGTTIGALIFA-LVVFLFRQ---PAFSMSGTSFIVAFLSGAFW-AIGQIGQFKSFKKIGVSKTMPISTGLQLV   84 (269)
T ss_pred             CcHHHHHHHHHHHHHHHH-HHHHHHhC---CCcchHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcceeeeccchhHHHH
Confidence            445554444444333333 33333332   3333  36677677777765 778889999999999999999886 6677


Q ss_pred             HHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCCCChhhhhcccCCCCCCCCCCchhHHHHHHH
Q 017672          119 ITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYPEIQKQVSESSPTNDCPIGRWIKGALIM  198 (368)
Q Consensus       119 ~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~  198 (368)
                      .+.+++.++++|--+..+.  ..-..++++.++|+.+....++++                   +..++..+...|++..
T Consensus        85 g~sl~gv~~fgEW~~~~~~--~~G~~Al~liiiGv~lts~~~~~~-------------------~~~~~~~~~~kgi~~L  143 (269)
T PF06800_consen   85 GTSLIGVLFFGEWTTTTQK--IIGFLALVLIIIGVILTSYQDKKS-------------------DKSSSKSNMKKGILAL  143 (269)
T ss_pred             HHHHHHHhhcCCCCCcchH--HHHHHHHHHHHHHHHHhccccccc-------------------cccccccchhhHHHHH
Confidence            7889999999998776610  112458888899998887632211                   1111345667899999


Q ss_pred             HHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCCCcccccchhhHHHHHHHHHHhhhHHHHHHH
Q 017672          199 ISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAWKLGWDIHLVSVVYCGLVINGITYWIQV  278 (368)
Q Consensus       199 l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~i~~~l~~  278 (368)
                      +++.+.|..|.+.-|..  +.+ ++....-+.....+...++....+.+     ...+..| .-+..|+ .-.++..++.
T Consensus       144 l~stigy~~Y~~~~~~~--~~~-~~~~~lPqaiGm~i~a~i~~~~~~~~-----~~~k~~~-~nil~G~-~w~ignl~~~  213 (269)
T PF06800_consen  144 LISTIGYWIYSVIPKAF--HVS-GWSAFLPQAIGMLIGAFIFNLFSKKP-----FFEKKSW-KNILTGL-IWGIGNLFYL  213 (269)
T ss_pred             HHHHHHHHHHHHHHHhc--CCC-hhHhHHHHHHHHHHHHHHHhhccccc-----ccccchH-HhhHHHH-HHHHHHHHHH
Confidence            99999999999997663  333 36666666544444444444333111     1111222 3344454 3447888999


Q ss_pred             HHHhccCcceeeecchhHHHHHHHHHHHHhcccccchh----HhHHHHHHHHHHH
Q 017672          279 WAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGS----VGGAVLLVGGLYS  329 (368)
Q Consensus       279 ~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~----~~G~~lii~gi~~  329 (368)
                      .+.++.+.+.+=.+..+.++++.+.+.++++|+=+..+    ++|..+++.|.++
T Consensus       214 is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  214 ISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL  268 (269)
T ss_pred             HhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence            99999999999999999999999999999999877654    4688888877653

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=99.22  E-value=3.2e-11  Score=94.53  Aligned_cols=104  Identities=21%  Similarity=0.311  Sum_probs=86.2

Q ss_pred             HHHHHHHHHHHHHHHhhhhcc--CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccChhhhhhcccchhHHHHHHHHH
Q 017672           49 VYRQAFASLALSPFAFFLESQ--NASPLSYSSVCKIFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGL  126 (368)
Q Consensus        49 ~~r~~~~~l~l~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~  126 (368)
                      .+|+.++.+++..+...+++.  ..+..+.+.+.+....|.++...++.++++|+++.+ +.++++.++.|+++.+++++
T Consensus         2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~   80 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL   80 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence            578999999888887764432  112223355666777788877688999999999999 58889999999999999999


Q ss_pred             HhcccccccccccccchhhHHHhHHhHHHHhhh
Q 017672          127 LRIESISIKYLHGIAKVLGSVVSVSGALVFAFV  159 (368)
Q Consensus       127 ~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~  159 (368)
                      ++|||++++      ++.+++++++|++++...
T Consensus        81 ~~~er~~~~------~~~a~~l~~~Gv~li~~~  107 (113)
T PF13536_consen   81 FFKERLSPR------RWLAILLILIGVILIAWS  107 (113)
T ss_pred             HhcCCCCHH------HHHHHHHHHHHHHHHhhh
Confidence            999999999      999999999999999873

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.18  E-value=8.3e-10  Score=101.56  Aligned_cols=137  Identities=13%  Similarity=0.097  Sum_probs=114.0

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHHH
Q 017672           13 SQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTL   92 (368)
Q Consensus        13 ~~~~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   92 (368)
                      ...|.++.++++++|+...+..|...++ .++.... +-..++.+++.++......  ....++..+...+.+|+++..+
T Consensus       146 ~~~G~ll~l~aa~~~a~~~v~~r~~~~~-~~~~~~~-~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~l~lgv~~t~~  221 (293)
T PRK10532        146 DLTGAALALGAGACWAIYILSGQRAGAE-HGPATVA-IGSLIAALIFVPIGALQAG--EALWHWSILPLGLAVAILSTAL  221 (293)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHH-HHHHHHHHHHHHHHHHccC--cccCCHHHHHHHHHHHHHHHHH
Confidence            3569999999999999999999998775 7887765 4455666677776654332  1223455565667888888889


Q ss_pred             HHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhh
Q 017672           93 SLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFV  159 (368)
Q Consensus        93 ~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~  159 (368)
                      .+.+|++++++.+++.++++.+++|+++.++++++++|+++..      +++|..+++.|++.....
T Consensus       222 ~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~------~~iG~~lIl~~~~~~~~~  282 (293)
T PRK10532        222 PYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLI------QWLALGAIIAASMGSTLT  282 (293)
T ss_pred             HHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHHhc
Confidence            9999999999999999999999999999999999999999999      999999999999999763

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.17  E-value=8.4e-10  Score=95.51  Aligned_cols=261  Identities=12%  Similarity=0.098  Sum_probs=189.0

Q ss_pred             CCCh--HHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccChhhhhhcccchhH
Q 017672           41 GMNP--FVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPA  118 (368)
Q Consensus        41 g~~~--~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~  118 (368)
                      |+.|  +.+++.++++-..+.++.....+ .+++.+++|.   +..++.+. .+.+.+.+-++.|++-..-.++..+.-+
T Consensus        70 gfkp~GWylTlvQf~~Ysg~glie~~~~~-~k~r~iP~rt---Y~~la~~t-~gtmGLsn~SlgYLNYPtQviFKccKli  144 (367)
T KOG1582|consen   70 GFKPFGWYLTLVQFLVYSGFGLIELQLIQ-TKRRVIPWRT---YVILAFLT-VGTMGLSNGSLGYLNYPTQVIFKCCKLI  144 (367)
T ss_pred             cCcccchHHHHHHHHHHHhhhheEEEeec-ccceecchhH---hhhhHhhh-hhccccCcCccccccCcHHHHHHhhhhh
Confidence            4553  56667777665544444332211 2222233444   44444443 4566677788888888777788888888


Q ss_pred             HHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCCCChhhhhcccCCCCCCCCCCchhHHHHHHH
Q 017672          119 ITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYPEIQKQVSESSPTNDCPIGRWIKGALIM  198 (368)
Q Consensus       119 ~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~  198 (368)
                      -+.+.+.++-+.|-++.      ++.+..+..+|+++.++.+.+.                       +.+-+..|+.+.
T Consensus       145 PVmiggifIqGkRY~v~------d~~aA~lm~lGli~FTLADs~~-----------------------sPNF~~~Gv~mI  195 (367)
T KOG1582|consen  145 PVMIGGIFIQGKRYGVH------DYIAAMLMSLGLIWFTLADSQT-----------------------SPNFNLIGVMMI  195 (367)
T ss_pred             hhhheeeeeccccccHH------HHHHHHHHHHHHHhhhhccccc-----------------------CCCcceeeHHHH
Confidence            88888888877776666      9999999999999998754321                       445557899999


Q ss_pred             HHHHHHHHHHHHHHHHhhhhCC-CcchhHHHHHHHHHHHHHHHHHHhhcCCCcccccchh---hHHHHHHHHHHhhhHHH
Q 017672          199 ISANTAWSLWLVLQGYIIKQYP-AKVRLTTLQCFFSCIQSAFWAVAAERNPSAWKLGWDI---HLVSVVYCGLVINGITY  274 (368)
Q Consensus       199 l~a~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~gi~~~~i~~  274 (368)
                      -.|.++-|.-...+++..+..+ +..+..++...++.+.++.......+-.+.|..-..+   .....++.+. .+.++.
T Consensus       196 sgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~-~gylG~  274 (367)
T KOG1582|consen  196 SGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSL-AGYLGI  274 (367)
T ss_pred             HHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHH-HhHhhH
Confidence            9999999999999999888776 3457778888888888777776655444444322211   2233333333 555666


Q ss_pred             HHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhhccccc
Q 017672          275 WIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWGKNR  336 (368)
Q Consensus       275 ~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~~~~~~  336 (368)
                      ......++..++..++.+...+..+++++++++|..++|....-|..+++.|+++-.+.|+.
T Consensus       275 ~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~n  336 (367)
T KOG1582|consen  275 VFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKRN  336 (367)
T ss_pred             HHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCCC
Confidence            67777788899999999999999999999999999999999999999999999998887743

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.13  E-value=1.2e-09  Score=100.39  Aligned_cols=138  Identities=13%  Similarity=0.105  Sum_probs=115.8

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHHH
Q 017672           13 SQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTL   92 (368)
Q Consensus        13 ~~~~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   92 (368)
                      ...|.++.++++++|+......|...+.  ++.....+++.++.+++.++............+...+..+...++++...
T Consensus       148 ~~~G~l~~l~a~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~  225 (292)
T PRK11272        148 NPWGAILILIASASWAFGSVWSSRLPLP--VGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSII  225 (292)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHhcCCC--cchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHH
Confidence            4579999999999999999999986443  44566778888888888777654332211113467788888889888889


Q ss_pred             HHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhh
Q 017672           93 SLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAF  158 (368)
Q Consensus        93 ~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~  158 (368)
                      .+.+|++++++.+++.++++.++.|++++++++++++|+++..      +++|..+++.|+.+...
T Consensus       226 ~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~------~iiG~~lIi~gv~~~~~  285 (292)
T PRK11272        226 AISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPI------EWLALGVIVFAVVLVTL  285 (292)
T ss_pred             HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHH------HHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999      99999999999999865

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.13  E-value=6.1e-10  Score=102.61  Aligned_cols=138  Identities=13%  Similarity=0.160  Sum_probs=109.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCCCccc--ccchhhHHHHHHHHH
Q 017672          190 RWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAWK--LGWDIHLVSVVYCGL  267 (368)
Q Consensus       190 ~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~gi  267 (368)
                      +..+|++++++++++|+...+..|.. .+.+ |.+..++++.++.+.+.+...... +.....  ..+...+ .....+.
T Consensus         5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~-~~~~~~~R~~~a~~~l~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~   80 (296)
T PRK15430          5 QTRQGVLLALAAYFIWGIAPAYFKLI-YYVP-ADEILTHRVIWSFFFMVVLMSICR-QWSYLKTLIQTPQKI-FMLAVSA   80 (296)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHh-cCCC-HHHHHHHHHHHHHHHHHHHHHHHc-cHHHHHHHHcCHHHH-HHHHHHH
Confidence            45689999999999999999999875 5565 599999999999887776653332 111110  0112222 2334566


Q ss_pred             HhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhh
Q 017672          268 VINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVL  331 (368)
Q Consensus       268 ~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~  331 (368)
                      +...+.+.++++++++.+++.++++.++.|+++.++++++++|+++..+++|+++.+.|+.+..
T Consensus        81 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~  144 (296)
T PRK15430         81 VLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL  144 (296)
T ss_pred             HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence            6777889999999999999999999999999999999999999999999999999999988765

>PRK13499 rhamnose-proton symporter; Provisional

Probab=99.11  E-value=6.1e-08  Score=89.50  Aligned_cols=297  Identities=12%  Similarity=0.055  Sum_probs=177.2

Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCC--hHHHHHHHHHHHHHHHHHHH--hhhhc---cCCCCCCHHHHHHHHH
Q 017672           12 ASQKPYIAMIFVQFAYAGMALFSKAAIAKGMN--PFVFVVYRQAFASLALSPFA--FFLES---QNASPLSYSSVCKIFL   84 (368)
Q Consensus        12 ~~~~~~~~~~l~~~~~~~~~~~~k~~~~~g~~--~~~~~~~r~~~~~l~l~~~~--~~~~~---~~~~~~~~~~~~~~~~   84 (368)
                      +...|+++.+++.++||.++...|. .++ .+  .++.+  -..+.. ++.|+.  ....+   ......+.+.+..-++
T Consensus         4 ~~~~G~~~~~i~~~~~GS~~~p~K~-~k~-w~wE~~W~v--~gi~~w-l~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l   78 (345)
T PRK13499          4 AIILGIIWHLIGGASSGSFYAPFKK-VKK-WSWETMWSV--GGIFSW-LILPWLIAALLLPDFWAYYSSFSGSTLLPVFL   78 (345)
T ss_pred             hhHHHHHHHHHHHHHhhcccccccc-cCC-CchhHHHHH--HHHHHH-HHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHH
Confidence            4667999999999999999999998 443 34  22221  111111 111111  11111   1122234566776777


Q ss_pred             HHHHHHHHHHHHHHHhccccChhhhhhccc-chhHHHHHHHHHHhcccc---cccccccccchhhHHHhHHhHHHHhhhc
Q 017672           85 VSLFGLTLSLNLYYVAINYTTATFAAATTN-TIPAITFVLAGLLRIESI---SIKYLHGIAKVLGSVVSVSGALVFAFVK  160 (368)
Q Consensus        85 ~g~~~~~~~~~~~~~al~~~~~~~~~~i~~-~~p~~~~ll~~~~~~e~~---~~~~~~~~~~~~gi~l~~~Gv~li~~~~  160 (368)
                      .|++- ...+..++.++++.+.+.+..+.. +.-+...++..++++|=-   +..  -...-.+|++++++|+++.....
T Consensus        79 ~G~~W-~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~--~g~~~~~gv~liliGi~l~s~Ag  155 (345)
T PRK13499         79 FGALW-GIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATN--GGRMTLLGVLVALIGVAIVGRAG  155 (345)
T ss_pred             HHHHH-HhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccc--hHHHHHHHHHHHHHHHHHHHHhh
Confidence            77775 677779999999999999987665 888899999999888532   221  11125788999999999987622


Q ss_pred             CCCCCCCCCChhhhhcccCCCCCC-CCCCchhHHHHHHHHHHHHHHHHHHH-------HHHHhh-hhCCCcchhHHHHHH
Q 017672          161 GPPLRFLNWYPEIQKQVSESSPTN-DCPIGRWIKGALIMISANTAWSLWLV-------LQGYII-KQYPAKVRLTTLQCF  231 (368)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~G~~~~l~a~~~~a~~~~-------~~~~~~-~~~~~~~~~~~~~~~  231 (368)
                      ..+++               .+.. +..+.+..+|+++++++++.++.|..       ..+... ...+ +......+..
T Consensus       156 ~~k~~---------------~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~-~~~~~lp~~~  219 (345)
T PRK13499        156 QLKER---------------KMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVD-PLYAALPSYV  219 (345)
T ss_pred             hhccc---------------ccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCC-chHHHHHHHH
Confidence            11100               0000 02346778999999999999999993       333211 1222 2333333333


Q ss_pred             ---HHHHHH-HHHHHHh--h-cCCCcccc--cchhhHHHH----HHHHHHhhhHHHHHHHHHHhccCcceeee---cc-h
Q 017672          232 ---FSCIQS-AFWAVAA--E-RNPSAWKL--GWDIHLVSV----VYCGLVINGITYWIQVWAIEKKGPVFIAI---FT-P  294 (368)
Q Consensus       232 ---~~~~~~-~~~~~~~--~-~~~~~~~~--~~~~~~~~l----~~~gi~~~~i~~~l~~~a~~~~~a~~~~~---~~-~  294 (368)
                         .+.++. .++....  . ++.+....  .++..+..-    ++.|+ .=.+++.++..+.++.+......   +. .
T Consensus       220 ~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~-~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~  298 (345)
T PRK13499        220 VIMGGGAITNLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGV-MWYLQFFFYAMGHSKLGAQYDFVSWMLHMS  298 (345)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCccchHHHHHhcc
Confidence               232222 2222211  1 11111111  111112222    33333 44567778888888886655544   44 7


Q ss_pred             hHHHHHHHHHHHHhccccc------chhHhHHHHHHHHHHHhhccc
Q 017672          295 FALIITAIFSAFLWKETLH------WGSVGGAVLLVGGLYSVLWGK  334 (368)
Q Consensus       295 ~~pv~~~i~~~~~~~e~~~------~~~~~G~~lii~gi~~~~~~~  334 (368)
                      +..+++.+.+.+ ++|.=+      ...++|.+++++|..+...++
T Consensus       299 ~~ViistlwGi~-lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~~  343 (345)
T PRK13499        299 FYVLCGNLWGLV-LKEWKGASRRPVRVLSLGCVVIILAANIVGLGN  343 (345)
T ss_pred             HHHHHHHHhhhh-hhhccCCCccchhHHHHHHHHHHHHHHHHhhcc
Confidence            778999999994 999765      566899999999988877654

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.08  E-value=1.5e-09  Score=89.91  Aligned_cols=138  Identities=15%  Similarity=0.121  Sum_probs=111.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhC------CCcchhHHHHHHHHHHHHHHHHHHhhcCCCccc---cc------chhh
Q 017672          194 GALIMISANTAWSLWLVLQGYIIKQY------PAKVRLTTLQCFFSCIQSAFWAVAAERNPSAWK---LG------WDIH  258 (368)
Q Consensus       194 G~~~~l~a~~~~a~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~------~~~~  258 (368)
                      |.++++.+.++.|++.+..|+..++.      .++.....+....+.+.+.+..+..|.......   ..      ....
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            67899999999999999999988772      256889999999999999999888776531111   00      1123


Q ss_pred             HHHHHHHHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhhc
Q 017672          259 LVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLW  332 (368)
Q Consensus       259 ~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~~  332 (368)
                      +..++..++ .....+...+..+++.+|...++...+..+..++++++++||++++.+++|.++.+.|++++.|
T Consensus        81 ~~~~~~~~~-~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   81 IFLLILSGL-LAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHH-HHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            334444444 4456677888999999999999999999999999999999999999999999999999988754

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=99.08  E-value=1.4e-08  Score=92.90  Aligned_cols=278  Identities=12%  Similarity=0.126  Sum_probs=154.4

Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHH
Q 017672           12 ASQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLT   91 (368)
Q Consensus        12 ~~~~~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   91 (368)
                      +...|+.++++++++-+....+-|....+ .+.   .-.|-              .++.++.  .+  ....+.|...+.
T Consensus         4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r-~~~---~~~~~--------------~~~~~~~--l~--~~~W~~G~~~~~   61 (300)
T PF05653_consen    4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLR-LPR---GSLRA--------------GSGGRSY--LR--RPLWWIGLLLMV   61 (300)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhc---ccccc--------------cchhhHH--Hh--hHHHHHHHHHHh
Confidence            45679999999999999999988877554 111   00000              0000010  11  122333444445


Q ss_pred             HHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCCCCh
Q 017672           92 LSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYP  171 (368)
Q Consensus        92 ~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~~~~  171 (368)
                      .+..+.+.|+.+.|.+..+++..+.-++.++++..++|||++++      ++.|..+++.|..++... +++.+...+.+
T Consensus        62 ~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~------~~~G~~l~i~G~~liv~~-~~~~~~~~t~~  134 (300)
T PF05653_consen   62 LGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRR------DIVGCALIILGSVLIVIF-APKEEPIHTLD  134 (300)
T ss_pred             cchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHh------HHhhHHHHHhhheeeEEe-CCCCCCcCCHH
Confidence            66677889999999999999999999999999999999999999      999999999999988763 33222111111


Q ss_pred             hhhhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHH-------HHHHHHh
Q 017672          172 EIQKQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQS-------AFWAVAA  244 (368)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~  244 (368)
                      +....          -.+.......... ..+...+.....+|..++  +.......-...+....       ..+....
T Consensus       135 ~l~~~----------~~~~~fl~y~~~~-~~~~~~L~~~~~~r~g~~--~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~  201 (300)
T PF05653_consen  135 ELIAL----------LSQPGFLVYFILV-LVLILILIFFIKPRYGRR--NILVYISICSLIGSFTVLSAKAISILIKLTF  201 (300)
T ss_pred             HHHHH----------hcCcceehhHHHH-HHHHHHHHHhhcchhccc--ceEEEEEEeccccchhhhHHHHHHHHHHHHh
Confidence            11100          0011111111111 112222222222232222  11111111111111111       1111111


Q ss_pred             hcCCCcccccchhhHHHHHHHHHHhhhHHHHHHHHHHhccCcceeeecch-hHHHHHHHHHHHHhcccc--cc----hhH
Q 017672          245 ERNPSAWKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTP-FALIITAIFSAFLWKETL--HW----GSV  317 (368)
Q Consensus       245 ~~~~~~~~~~~~~~~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~-~~pv~~~i~~~~~~~e~~--~~----~~~  317 (368)
                      +++ +.  ......| .++...+.+........++|+++.+++.+.++.+ .-...+++-+.++++|..  +.    ...
T Consensus       202 ~g~-~~--f~~~~~y-~l~~~~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~  277 (300)
T PF05653_consen  202 SGD-NQ--FTYPLTY-LLLLVLVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFL  277 (300)
T ss_pred             cCc-hh--hhhhHHH-HHHHHHHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHH
Confidence            111 11  1121223 3333334466677788889999999988887655 455667777777888754  44    345


Q ss_pred             hHHHHHHHHHHHhhcccc
Q 017672          318 GGAVLLVGGLYSVLWGKN  335 (368)
Q Consensus       318 ~G~~lii~gi~~~~~~~~  335 (368)
                      .|+.+++.|+++....|+
T Consensus       278 ~G~~~ii~GV~lL~~~~~  295 (300)
T PF05653_consen  278 CGFLIIIIGVFLLSSSKD  295 (300)
T ss_pred             HHHHHHHHhhheeeccCc
Confidence            788888899888764433

>TIGR00688 rarD rarD protein

Probab=99.05  E-value=1.7e-09  Score=97.52  Aligned_cols=136  Identities=14%  Similarity=0.252  Sum_probs=106.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCC---Ccccccchhh-HHHHHHHHHH
Q 017672          193 KGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNP---SAWKLGWDIH-LVSVVYCGLV  268 (368)
Q Consensus       193 ~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~l~~~gi~  268 (368)
                      +|.+++++++++|+...+..|. ..+.+ |.+..+++++++.+.+.++.....+..   ..++.....+ +..+...|++
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   79 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LKPLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL   79 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hccCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence            4889999999999999999998 45565 499999999999887766553332110   0111111122 3334455553


Q ss_pred             hhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhh
Q 017672          269 INGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVL  331 (368)
Q Consensus       269 ~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~  331 (368)
                       ..+.+.++++++++.+++.++.+.++.|+++.++++++++|+++..+++|..+.++|+.+..
T Consensus        80 -~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~  141 (256)
T TIGR00688        80 -IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI  141 (256)
T ss_pred             -HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence             66889999999999999999999999999999999999999999999999999999987664

This uncharacterized protein is predicted to have many membrane-spanning domains.

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.05  E-value=3.6e-09  Score=96.77  Aligned_cols=133  Identities=10%  Similarity=0.031  Sum_probs=101.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCCCcccccchhhHHHHHHHHHHhhhHHH
Q 017672          195 ALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAWKLGWDIHLVSVVYCGLVINGITY  274 (368)
Q Consensus       195 ~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~i~~  274 (368)
                      .++.+++++++|...+..|+..++. ++.  ..+....+.+...++..... ....++... ..++..+..+.+.....+
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~-~~~--~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~   77 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKE-PDF--LWWALLAHSVLLTPYGLWYL-AQVGWSRLP-ATFWLLLAISAVANMVYF   77 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCch-hHH--HHHHHHHHHHHHHHHHHHhc-ccCCCCCcc-hhhHHHHHHHHHHHHHHH
Confidence            4678999999999999999877763 322  35555555666666554321 112333222 334445555555777889


Q ss_pred             HHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhhc
Q 017672          275 WIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLW  332 (368)
Q Consensus       275 ~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~~  332 (368)
                      .++++++++.+++.++++.+++|+++.++++++++|+++..+++|.++++.|+.+...
T Consensus        78 ~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~  135 (281)
T TIGR03340        78 LGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL  135 (281)
T ss_pred             HHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence            9999999999999999999999999999999999999999999999999999988764

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=99.03  E-value=8.6e-10  Score=91.08  Aligned_cols=210  Identities=15%  Similarity=0.078  Sum_probs=151.0

Q ss_pred             HHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCCCC
Q 017672           91 TLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWY  170 (368)
Q Consensus        91 ~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~~~  170 (368)
                      .+.+.+|..+++..+++.++.+..+...|+.+++++++++|+...      ++++.++++.|++++...+.         
T Consensus        64 t~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~------kIlaailAI~GiVmiay~DN---------  128 (290)
T KOG4314|consen   64 TGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGF------KILAAILAIGGIVMIAYADN---------  128 (290)
T ss_pred             ecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhh------hHHHHHHHhCcEEEEEeccc---------
Confidence            345559999999999999999999999999999999999999999      99999999999999975322         


Q ss_pred             hhhhhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHH--HHHHHHHH-HHHHHHHHhhcC
Q 017672          171 PEIQKQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTT--LQCFFSCI-QSAFWAVAAERN  247 (368)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~  247 (368)
                                      ...+...|+.+++.+++..|+|-+.-|+...+-+-.-...+  ..-++..+ ...+.....-..
T Consensus       129 ----------------~~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~  192 (290)
T KOG4314|consen  129 ----------------EHADEIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPALILAFTG  192 (290)
T ss_pred             ----------------hhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHHHHHHhc
Confidence                            44566899999999999999999999988765431011111  11111111 111111111112


Q ss_pred             CCcccccchhhHHHHHHHHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHH
Q 017672          248 PSAWKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGL  327 (368)
Q Consensus       248 ~~~~~~~~~~~~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi  327 (368)
                      .++|+......|..+...+.+.. .-.++.+.++....|...++-......--...+.++-+-..+.....|..+|..|.
T Consensus       193 VE~~qsFA~~PWG~l~G~A~L~l-AFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~F  271 (290)
T KOG4314|consen  193 VEHLQSFAAAPWGCLCGAAGLSL-AFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGF  271 (290)
T ss_pred             hHHHHHHhhCCchhhhhHHHHHH-HHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence            23443333345666655555433 33457778888888888888877777788888888766677888899999999998


Q ss_pred             HHhhc
Q 017672          328 YSVLW  332 (368)
Q Consensus       328 ~~~~~  332 (368)
                      ++...
T Consensus       272 iLiii  276 (290)
T KOG4314|consen  272 ILIII  276 (290)
T ss_pred             Hheec
Confidence            77664

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.03  E-value=4.4e-09  Score=96.89  Aligned_cols=134  Identities=19%  Similarity=0.224  Sum_probs=104.5

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHHH
Q 017672           13 SQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTL   92 (368)
Q Consensus        13 ~~~~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   92 (368)
                      ...|.+++++++++|+...+..|...++ .++....+   ....+.+.+........ ....+...+..++..++ ....
T Consensus       154 ~~~G~~~~l~aa~~~A~~~v~~k~~~~~-~~~~~~~~---~~~~~~l~~~~~~~~~~-~~~~~~~~~~~l~~~~~-~t~~  227 (295)
T PRK11689        154 NPLSYGLAFIGAFIWAAYCNVTRKYARG-KNGITLFF---ILTALALWIKYFLSPQP-AMVFSLPAIIKLLLAAA-AMGF  227 (295)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHhhccCC-CCchhHHH---HHHHHHHHHHHHHhcCc-cccCCHHHHHHHHHHHH-HHHH
Confidence            3468999999999999999999998765 77765432   22333333322222211 12345566766666664 4577


Q ss_pred             HHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhh
Q 017672           93 SLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAF  158 (368)
Q Consensus        93 ~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~  158 (368)
                      .+.+|++++++.+++.++.+.++.|++..++++++++|+++..      +++|.++++.|+.+...
T Consensus       228 ~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~------~~iG~~lI~~gv~~~~~  287 (295)
T PRK11689        228 GYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFS------FWQGVAMVTAGSLLCWL  287 (295)
T ss_pred             HHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHhHHHHhh
Confidence            8889999999999999999999999999999999999999999      99999999999988865

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.02  E-value=7.4e-09  Score=97.33  Aligned_cols=137  Identities=9%  Similarity=0.105  Sum_probs=104.0

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHhcCCCh-HHHHHHHHHHHHHHHHHHHhhhhccCC----CCCCHHHHHHHHHHHHH
Q 017672           14 QKPYIAMIFVQFAYAGMALFSKAAIAKGMNP-FVFVVYRQAFASLALSPFAFFLESQNA----SPLSYSSVCKIFLVSLF   88 (368)
Q Consensus        14 ~~~~~~~~l~~~~~~~~~~~~k~~~~~g~~~-~~~~~~r~~~~~l~l~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~   88 (368)
                      ..|.+++++++++|+...++.|..... .++ ....++...++.+.+.+......+...    ...+.. ....+..++.
T Consensus       188 ~lG~~l~l~aa~~wa~~~il~~~~~~~-~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~i~y~~i~  265 (358)
T PLN00411        188 LIGGALLTIQGIFVSVSFILQAHIMSE-YPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDIT-LITIVTMAII  265 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH-cCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchH-HHHHHHHHHH
Confidence            458899999999999999999987765 655 455666666666655554443322111    111222 2223334444


Q ss_pred             HHHHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhh
Q 017672           89 GLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFV  159 (368)
Q Consensus        89 ~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~  159 (368)
                       ..+++.++++++++.+++.+++..++.|++++++++++++|+++..      +++|.++++.|+.++...
T Consensus       266 -t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~------~~iG~~LIl~Gv~l~~~~  329 (358)
T PLN00411        266 -TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLG------CLIGGILITLGFYAVMWG  329 (358)
T ss_pred             -HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHHhh
Confidence             4567889999999999999999999999999999999999999999      999999999999998763

>TIGR00803 nst UDP-galactose transporter

Probab=98.98  E-value=8.8e-10  Score=97.20  Aligned_cols=215  Identities=12%  Similarity=0.009  Sum_probs=129.7

Q ss_pred             hhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCCCChhhhhcccCCCCCCCC
Q 017672          107 TFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYPEIQKQVSESSPTNDC  186 (368)
Q Consensus       107 ~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (368)
                      .......+..++++++.++.+.+||.+..      ++++.++...|+......+.+......-...-...|.+++.....
T Consensus         5 Pa~~~~~s~~l~~v~l~~~~~~~~~~~~~------~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~   78 (222)
T TIGR00803         5 PIHIIFKQNNLVLIALGNLLAAGKQVTQL------KILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTL   78 (222)
T ss_pred             cchHHHHhcchHHHHHhcccccceeeehH------HHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCcccc
Confidence            34456667888888888888888888877      899999888888765432111000000000000000001100111


Q ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchh-HHHHHHHHHHHHHHHHHHhhcC-CCcccccchhhHHHHHH
Q 017672          187 PIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRL-TTLQCFFSCIQSAFWAVAAERN-PSAWKLGWDIHLVSVVY  264 (368)
Q Consensus       187 ~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~  264 (368)
                      ..++...|....+.+.++.+...+.+++..++.+..... +....+.+.+...........+ ...+...  ..+....+
T Consensus        79 ~~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  156 (222)
T TIGR00803        79 MFGNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFF--IGYPTAVW  156 (222)
T ss_pred             ccccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcc--cCCchHHH
Confidence            223556788888889998889999998876665431211 1111222222111111111111 0111100  11122222


Q ss_pred             HHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHH
Q 017672          265 CGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYS  329 (368)
Q Consensus       265 ~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~  329 (368)
                      ..++.+.++..+..+.+|+.++...+....++++++.+++++++||+++..++.|+.+++.|+++
T Consensus       157 ~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       157 IVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            23345567777889999999999999999999999999999999999999999999999998765

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.95  E-value=2.5e-08  Score=92.06  Aligned_cols=139  Identities=13%  Similarity=0.255  Sum_probs=108.3

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHhcC--CChHHHHHHHHHHHHHHHHHHHhhhhcc-----CCCCCCHHHHHHHHHHH
Q 017672           14 QKPYIAMIFVQFAYAGMALFSKAAIAKG--MNPFVFVVYRQAFASLALSPFAFFLESQ-----NASPLSYSSVCKIFLVS   86 (368)
Q Consensus        14 ~~~~~~~~l~~~~~~~~~~~~k~~~~~g--~~~~~~~~~r~~~~~l~l~~~~~~~~~~-----~~~~~~~~~~~~~~~~g   86 (368)
                      ..|.+++++++++|+...+..|...++.  .+.....++-.+.+.+.+.......+..     .+...+...+..++.++
T Consensus       142 ~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  221 (299)
T PRK11453        142 MLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLA  221 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHH
Confidence            4699999999999999999999876541  2223334444444443333332222211     11234567888889999


Q ss_pred             HHHHHHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhh
Q 017672           87 LFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAF  158 (368)
Q Consensus        87 ~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~  158 (368)
                      +++....+.+|+.++++.+++.++.+..+.|++..++++++++|+++..      +++|..++++|+.+...
T Consensus       222 i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~------~~iG~~lI~~gv~l~~~  287 (299)
T PRK11453        222 FVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGL------QFLGAVLIMAGLYINVF  287 (299)
T ss_pred             HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHH------HHHHHHHHHHHHHHHhc
Confidence            9999999999999999999999999999999999999999999999999      99999999999998764

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.89  E-value=2.9e-08  Score=78.99  Aligned_cols=122  Identities=12%  Similarity=0.063  Sum_probs=94.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCCCcccccchhhHHHHHHHHHHhhhH
Q 017672          193 KGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAWKLGWDIHLVSVVYCGLVINGI  272 (368)
Q Consensus       193 ~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~i  272 (368)
                      .|.++.+.+.++-+...++.|+..++.++ ...... .    . ..... .  .           .....+++|+++.++
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~-~~~~~~-~----~-~~~~~-~--~-----------~p~~~i~lgl~~~~l   60 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLPL-LSHAWD-F----I-AALLA-F--G-----------LALRAVLLGLAGYAL   60 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCC-ccchhH-H----H-HHHHH-H--h-----------ccHHHHHHHHHHHHH
Confidence            47888999999999999999998887653 322111 0    0 00001 0  0           012357888899999


Q ss_pred             HHHHHHHHHhccCcceeeecchhHHHHHHHHHHH--HhcccccchhHhHHHHHHHHHHHhhcccc
Q 017672          273 TYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAF--LWKETLHWGSVGGAVLLVGGLYSVLWGKN  335 (368)
Q Consensus       273 ~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~--~~~e~~~~~~~~G~~lii~gi~~~~~~~~  335 (368)
                      ++.+|.+++++.+++.+..+....+++..+.++.  ++||++|+.+++|+++|++|+++..+.++
T Consensus        61 a~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~  125 (129)
T PRK02971         61 SMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTT  125 (129)
T ss_pred             HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence            9999999999999999999999998888888885  79999999999999999999999875433

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.86  E-value=1.8e-08  Score=93.20  Aligned_cols=140  Identities=14%  Similarity=0.238  Sum_probs=107.6

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHhhhhccCCCC---------CCH-HHHHH
Q 017672           13 SQKPYIAMIFVQFAYAGMALFSKAAIAK-GMNPFVFVVYRQAFASLALSPFAFFLESQNASP---------LSY-SSVCK   81 (368)
Q Consensus        13 ~~~~~~~~~l~~~~~~~~~~~~k~~~~~-g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~---------~~~-~~~~~   81 (368)
                      +..|.++.++++++|+...+..|...++ +.+|..+.++.+..+.+.++|+....+......         ... ..+..
T Consensus       143 ~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (302)
T TIGR00817       143 NWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTV  222 (302)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHH
Confidence            4569999999999999999999998761 389999999999999999998876543211000         000 11111


Q ss_pred             HHHHHHHHHHHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhh
Q 017672           82 IFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAF  158 (368)
Q Consensus        82 ~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~  158 (368)
                      .+..+.......+.+++.+++++++..+++...+.|+++.++++++++|+++..      +++|..+++.|+.+...
T Consensus       223 ~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~------~~~G~~lil~Gv~l~~~  293 (302)
T TIGR00817       223 SLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQ------QVFGTGIAIAGVFLYSR  293 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchh------HHHHHHHHHHHHHHHHH
Confidence            222222222333357778999999999999999999999999999999999999      99999999999999865

specificities overlap.

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.79  E-value=2.2e-08  Score=78.42  Aligned_cols=107  Identities=18%  Similarity=0.269  Sum_probs=80.7

Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCcccccchhhHHHHHHHHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHH
Q 017672          228 LQCFFSCIQSAFWAVAAERNPSAWKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFL  307 (368)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~  307 (368)
                      ++...+.+....+.....+..+.++......+...+..|++....++.++.+++++.++ .++.+..++|+++.++++++
T Consensus         3 ~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~   81 (113)
T PF13536_consen    3 FRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLF   81 (113)
T ss_pred             HHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHH
Confidence            45556666665555442221111222222455666677776767899999999999995 88899999999999999999


Q ss_pred             hcccccchhHhHHHHHHHHHHHhhcccc
Q 017672          308 WKETLHWGSVGGAVLLVGGLYSVLWGKN  335 (368)
Q Consensus       308 ~~e~~~~~~~~G~~lii~gi~~~~~~~~  335 (368)
                      ++|+++..+++|++++++|+.+..+.+.
T Consensus        82 ~~er~~~~~~~a~~l~~~Gv~li~~~~~  109 (113)
T PF13536_consen   82 FKERLSPRRWLAILLILIGVILIAWSDL  109 (113)
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence            9999999999999999999999887544

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.67  E-value=6.5e-07  Score=73.95  Aligned_cols=133  Identities=20%  Similarity=0.296  Sum_probs=110.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhc------CCChHHHHHHHHHHHHHHHHHHHhhhhccCCCC----C-------CHHH
Q 017672           16 PYIAMIFVQFAYAGMALFSKAAIAK------GMNPFVFVVYRQAFASLALSPFAFFLESQNASP----L-------SYSS   78 (368)
Q Consensus        16 ~~~~~~l~~~~~~~~~~~~k~~~~~------g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~----~-------~~~~   78 (368)
                      |.++++.+.++-+...+..|...++      ..++..+..+....+.+++++.....+.....+    .       +.+.
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            5788999999999999999987755      689999999999999999999887766533111    0       1234


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHH
Q 017672           79 VCKIFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALV  155 (368)
Q Consensus        79 ~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~l  155 (368)
                      +..++..|+++ ...+...+..++++++...++......+.+.++++++++|+++..      ++.|+.++++|+.+
T Consensus        81 ~~~~~~~~~~~-~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~------~~~G~~l~~~G~~~  150 (153)
T PF03151_consen   81 IFLLILSGLLA-FLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPL------QIIGIVLALVGVLL  150 (153)
T ss_pred             HHHHHHHHHHH-HHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHH------HHHHHHHHHHHHhe
Confidence            55556666665 455558889999999999999999999999999999999999999      99999999999875

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.66  E-value=6.4e-07  Score=84.41  Aligned_cols=139  Identities=13%  Similarity=0.186  Sum_probs=101.6

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHhc------CCChHHHHHHHHHHHHHHHHHHHhhhhccCC-----------CCCC
Q 017672           13 SQKPYIAMIFVQFAYAGMALFSKAAIAK------GMNPFVFVVYRQAFASLALSPFAFFLESQNA-----------SPLS   75 (368)
Q Consensus        13 ~~~~~~~~~l~~~~~~~~~~~~k~~~~~------g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~-----------~~~~   75 (368)
                      +..|.+++++++++|+...+..|...++      ..++.....+-...++++++|+....+....           ....
T Consensus       192 ~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~  271 (350)
T PTZ00343        192 TWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYT  271 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccc
Confidence            4679999999999999999999998764      1557767777788888888888764321100           0001


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHH
Q 017672           76 YSSVCKIFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALV  155 (368)
Q Consensus        76 ~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~l  155 (368)
                      .......++.+.+.....+.+.+.+++++++..+++...+.|+++.++++++++|+++..      +++|..+++.|+.+
T Consensus       272 ~~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~------~~iG~~lii~Gv~l  345 (350)
T PTZ00343        272 KGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLL------GYLGMAVAILGALL  345 (350)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchH------hHHHHHHHHHHHHH
Confidence            111111222222222222333446999999999999999999999999999999999999      99999999999988


Q ss_pred             Hh
Q 017672          156 FA  157 (368)
Q Consensus       156 i~  157 (368)
                      ..
T Consensus       346 Ys  347 (350)
T PTZ00343        346 YS  347 (350)
T ss_pred             Hh
Confidence            64

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.62  E-value=1.1e-06  Score=80.19  Aligned_cols=135  Identities=20%  Similarity=0.263  Sum_probs=108.0

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHH-HHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHH
Q 017672           13 SQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVV-YRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLT   91 (368)
Q Consensus        13 ~~~~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~-~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   91 (368)
                      ...|.++.++++++|+...+..|... + .++..... +.+........+... ...+  .+...+.+......|+++..
T Consensus       152 ~~~g~~~~l~a~~~~a~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~g~~~~~  226 (292)
T COG0697         152 SLLGLLLALAAALLWALYTALVKRLS-R-LGPVTLALLLQLLLALLLLLLFFL-SGFG--APILSRAWLLLLYLGVFSTG  226 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhc-C-CChHHHHHHHHHHHHHHHHHHHHh-cccc--ccCCHHHHHHHHHHHHHHHH
Confidence            46899999999999999999999876 4 66666666 444422222222222 1111  23457788888999988877


Q ss_pred             HHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhh
Q 017672           92 LSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAF  158 (368)
Q Consensus        92 ~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~  158 (368)
                      ..+.+++++++..+++..+.+..+.|++..++++++++|+++..      +++|..+.+.|+.+...
T Consensus       227 i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~------~~~G~~li~~g~~l~~~  287 (292)
T COG0697         227 LAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPA------QLLGAALVVLGVLLASL  287 (292)
T ss_pred             HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHhc
Confidence            78989999999999999999999999999999999999999999      99999999999999864

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=98.59  E-value=2.8e-08  Score=85.19  Aligned_cols=277  Identities=14%  Similarity=0.074  Sum_probs=183.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 017672           16 PYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTLSLN   95 (368)
Q Consensus        16 ~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   95 (368)
                      .++.+++-++.||..+.+.-..   |-.|-+....-.+-+.++-+.+.+. .   .|..+.+.+..-++.|++- ...+.
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~---GG~p~qQ~lGtT~GALifaiiv~~~-~---~p~~T~~~~iv~~isG~~W-s~GQ~   74 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKF---GGKPYQQTLGTTLGALIFAIIVFLF-V---SPELTLTIFIVGFISGAFW-SFGQA   74 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeec---CCChhHhhhhccHHHHHHHHHHhee-e---cCccchhhHHHHHHhhhHh-hhhhh
Confidence            5788999999999988876533   5677776655554444444444333 2   3444566666666666664 67777


Q ss_pred             HHHHhccccChhhhhhccc-chhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCCCChhhh
Q 017672           96 LYYVAINYTTATFAAATTN-TIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYPEIQ  174 (368)
Q Consensus        96 ~~~~al~~~~~~~~~~i~~-~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~~~~~~~  174 (368)
                      ..+.|+++.+++.+.++.. +.-+-+.+++.++++|=-+..+  -....+++++.++|+.+-... ++            
T Consensus        75 ~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~--~IlG~iAliliviG~~lTs~~-~~------------  139 (288)
T COG4975          75 NQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQ--IILGFIALILIVIGIYLTSKQ-DR------------  139 (288)
T ss_pred             hhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchh--HHHHHHHHHHHHHhheEeeee-cc------------
Confidence            9999999999999998887 7777788889999998655551  011134555666666665442 11            


Q ss_pred             hcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCCCccccc
Q 017672          175 KQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAWKLG  254 (368)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (368)
                            .+..++..++..+|....+.+.+.|-.|.+..+...  .+. ++...-+..-..+..+.+. ....+.    ..
T Consensus       140 ------~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~--v~g-~saiLPqAiGMv~~ali~~-~~~~~~----~~  205 (288)
T COG4975         140 ------NNKEEENPSNLKKGIVILLISTLGYVGYVVLFQLFD--VDG-LSAILPQAIGMVIGALILG-FFKMEK----RF  205 (288)
T ss_pred             ------ccccccChHhhhhheeeeeeeccceeeeEeeecccc--ccc-hhhhhHHHHHHHHHHHHHh-hccccc----ch
Confidence                  111222456678899999999999999999876653  222 4444444333333333333 222111    11


Q ss_pred             chhhHHHHHHHHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhH----hHHHHHHHHHHHh
Q 017672          255 WDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSV----GGAVLLVGGLYSV  330 (368)
Q Consensus       255 ~~~~~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~----~G~~lii~gi~~~  330 (368)
                      + ...+..+..|. .=.++...+..+.++.+.+..=.+..+..+++.+-+.++++|+=|..++    +|.+++++|..+.
T Consensus       206 ~-K~t~~nii~G~-~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~l  283 (288)
T COG4975         206 N-KYTWLNIIPGL-IWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILL  283 (288)
T ss_pred             H-HHHHHHHhhHH-HHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhh
Confidence            2 22233344454 3347888999999999999999999999999999999999999887764    6788888876654


Q ss_pred             h
Q 017672          331 L  331 (368)
Q Consensus       331 ~  331 (368)
                      .
T Consensus       284 g  284 (288)
T COG4975         284 G  284 (288)
T ss_pred             h
Confidence            3

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.58  E-value=9.2e-07  Score=68.68  Aligned_cols=70  Identities=16%  Similarity=0.151  Sum_probs=63.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHh
Q 017672           82 IFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFA  157 (368)
Q Consensus        82 ~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~  157 (368)
                      ....+.++...++.++..+++..|.+.+..+.++.++++.+++++++|||++.+      +++|+.++++|++++.
T Consensus        39 ~~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~------~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         39 WLGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPR------HWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHh
Confidence            334445667788899999999999999999999999999999999999999999      9999999999999885

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.54  E-value=1.3e-06  Score=80.08  Aligned_cols=130  Identities=9%  Similarity=0.066  Sum_probs=102.5

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH----HHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHH
Q 017672           13 SQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQA----FASLALSPFAFFLESQNASPLSYSSVCKIFLVSLF   88 (368)
Q Consensus        13 ~~~~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   88 (368)
                      .++|+++.+++++.++......|..  + .+|....+....    .+.+++.++   + + .++. ..+..+..++.|++
T Consensus       150 ~~~Gi~~~l~sg~~y~~~~~~~~~~--~-~~~~~~~~~~~~g~~~~~~~~~~~~---~-~-~~~~-~~~~~~~~~~~Gi~  220 (290)
T TIGR00776       150 FKKGILLLLMSTIGYLVYVVVAKAF--G-VDGLSVLLPQAIGMVIGGIIFNLGH---I-L-AKPL-KKYAILLNILPGLM  220 (290)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHc--C-CCcceehhHHHHHHHHHHHHHHHHH---h-c-ccch-HHHHHHHHHHHHHH
Confidence            3789999999999999999999975  2 788888555554    333333332   1 1 1221 23444455668888


Q ss_pred             HHHHHHHHHHHhcc-ccChhhhhhcccchhHHHHHHHHHHhcccccccccccccch----hhHHHhHHhHHHHhh
Q 017672           89 GLTLSLNLYYVAIN-YTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKV----LGSVVSVSGALVFAF  158 (368)
Q Consensus        89 ~~~~~~~~~~~al~-~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~----~gi~l~~~Gv~li~~  158 (368)
                       ....+.+|+.+.+ +.+++.++++.+..|+...+.+.+++||+.+++      ++    +|.++.+.|+.++..
T Consensus       221 -~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~------~~~~~~iG~~lIi~~~~l~~~  288 (290)
T TIGR00776       221 -WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKR------EMIAISVGIILIIIAANILGI  288 (290)
T ss_pred             -HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcc------eeehhHHHHHHHHHHHHHHhc
Confidence             4788889999999 999999999999999999999999999999999      99    999999999998753

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.53  E-value=7e-07  Score=79.01  Aligned_cols=143  Identities=16%  Similarity=0.232  Sum_probs=115.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCCCccc-ccchhhHHHHHHHHHH
Q 017672          190 RWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAWK-LGWDIHLVSVVYCGLV  268 (368)
Q Consensus       190 ~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~gi~  268 (368)
                      +...|+++++.|-+.|+..-...|-. +..++ .++..++.+.+.+..........+..+-+. ...+..+......+.+
T Consensus         4 ~~~~Gil~~l~Ay~lwG~lp~y~kll-~~~~~-~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l   81 (293)
T COG2962           4 DSRKGILLALLAYLLWGLLPLYFKLL-EPLPA-TEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL   81 (293)
T ss_pred             cccchhHHHHHHHHHHHHHHHHHHHH-ccCCH-HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH
Confidence            34689999999999999999888775 55554 899999999999988877766554433222 2233456666666664


Q ss_pred             hhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhhcccc
Q 017672          269 INGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWGKN  335 (368)
Q Consensus       269 ~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~~~~~  335 (368)
                      . .....++.+++.......++.-++++|.+.+++|.++++|+++..|++..++..+|+....+...
T Consensus        82 i-~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g  147 (293)
T COG2962          82 I-GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLG  147 (293)
T ss_pred             H-HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcC
Confidence            4 48899999999999999999999999999999999999999999999999999999888766443

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=98.50  E-value=1.3e-06  Score=75.34  Aligned_cols=138  Identities=12%  Similarity=0.019  Sum_probs=118.1

Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHH
Q 017672           12 ASQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLT   91 (368)
Q Consensus        12 ~~~~~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   91 (368)
                      -...|..+++.+..+|+.+.+..|.+-+. .+.-.-+..-+++++++.+|+-.........  ++.-...-+..++++..
T Consensus       145 lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~-~~g~~g~a~gm~vAaviv~Pig~~~ag~~l~--~p~ll~laLgvavlSSa  221 (292)
T COG5006         145 LDPVGVALALGAGACWALYIVLGQRAGRA-EHGTAGVAVGMLVAALIVLPIGAAQAGPALF--SPSLLPLALGVAVLSSA  221 (292)
T ss_pred             CCHHHHHHHHHHhHHHHHHHHHcchhccc-CCCchHHHHHHHHHHHHHhhhhhhhcchhhc--ChHHHHHHHHHHHHhcc
Confidence            45679999999999999999999988754 6666778889999999999987754433222  35666666788888888


Q ss_pred             HHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhh
Q 017672           92 LSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAF  158 (368)
Q Consensus        92 ~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~  158 (368)
                      ..+.+-..+++..|....+++.++.|.+.++.++++++|+++..      ||+++..++.+.+-.++
T Consensus       222 lPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~------qwlaI~~ViaAsaG~~l  282 (292)
T COG5006         222 LPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLI------QWLAIAAVIAASAGSTL  282 (292)
T ss_pred             cchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHH------HHHHHHHHHHHHhcccc
Confidence            89999999999999999999999999999999999999999999      99999999988876654

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.46  E-value=3.2e-06  Score=67.31  Aligned_cols=119  Identities=20%  Similarity=0.201  Sum_probs=91.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHH
Q 017672           15 KPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTLSL   94 (368)
Q Consensus        15 ~~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   94 (368)
                      .++++++++.++-+...++.|...++ ......... .. .    .....   .  .|       ...+..|+.....++
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~-~g~~~~~~~-~~-~----~~~~~---~--~p-------~~~i~lgl~~~~la~   62 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSR-LPLLSHAWD-FI-A----ALLAF---G--LA-------LRAVLLGLAGYALSM   62 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhh-CCCccchhH-HH-H----HHHHH---h--cc-------HHHHHHHHHHHHHHH
Confidence            47888999999999999999998876 443332211 10 0    00000   0  01       125667777888899


Q ss_pred             HHHHHhccccChhhhhhcccchhHHHHHHHHH--HhcccccccccccccchhhHHHhHHhHHHHhh
Q 017672           95 NLYYVAINYTTATFAAATTNTIPAITFVLAGL--LRIESISIKYLHGIAKVLGSVVSVSGALVFAF  158 (368)
Q Consensus        95 ~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~--~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~  158 (368)
                      .++..+++..|++.+..+.+..+.++.+.++.  +++|+++..      +++|+.++++|+.++..
T Consensus        63 ~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~------~~iGi~lIi~GV~lv~~  122 (129)
T PRK02971         63 LCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLK------KTLGVACIMLGVWLINL  122 (129)
T ss_pred             HHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHhcc
Confidence            99999999999999999999998888888874  899999999      99999999999999864

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.45  E-value=1.4e-06  Score=67.72  Aligned_cols=67  Identities=12%  Similarity=0.216  Sum_probs=61.5

Q ss_pred             HHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhh
Q 017672          265 CGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVL  331 (368)
Q Consensus       265 ~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~  331 (368)
                      .++++.++++.++.+++++.+.+++-.+.++.++++.+.++++|||++++.+++|.+++++|+.+..
T Consensus        42 ~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         42 LALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            3445667899999999999999999999999999999999999999999999999999999988764

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=98.28  E-value=1.3e-05  Score=74.32  Aligned_cols=141  Identities=13%  Similarity=0.109  Sum_probs=111.3

Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCC--HHHHHHHHHHHHH
Q 017672           11 TASQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLS--YSSVCKIFLVSLF   88 (368)
Q Consensus        11 ~~~~~~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~   88 (368)
                      .+..+|-++++++++++|..++.-+...++ .++.++..+-.+++.++..+.....++......+  .+... +++...+
T Consensus       164 ~~~i~GDll~l~~a~lya~~nV~~E~~v~~-~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~-~~v~~~~  241 (334)
T PF06027_consen  164 SNPILGDLLALLGAILYAVSNVLEEKLVKK-APRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIG-LLVGYAL  241 (334)
T ss_pred             CccchhHHHHHHHHHHHHHHHHHHHHhccc-CCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHH-HHHHHHH
Confidence            467899999999999999999999999887 8999998888888888888777655554444332  33332 2222233


Q ss_pred             HHHHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhh
Q 017672           89 GLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFV  159 (368)
Q Consensus        89 ~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~  159 (368)
                      +....+.+.-..+++++++...+-.-+..+++.++..+++|+++++.      .++|.+++++|.++....
T Consensus       242 ~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~l------y~~af~lIiiG~vvy~~~  306 (334)
T PF06027_consen  242 CLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWL------YILAFALIIIGFVVYNLA  306 (334)
T ss_pred             HHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHH------HHHHHHHHHHHhheEEcc
Confidence            34455556677888999988888778889999999999999999999      999999999999998763

Some of the sequences in this family are annotated as putative membrane proteins.

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=98.21  E-value=3.8e-06  Score=75.22  Aligned_cols=275  Identities=12%  Similarity=0.103  Sum_probs=159.6

Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHH
Q 017672           11 TASQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGL   90 (368)
Q Consensus        11 ~~~~~~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   90 (368)
                      .++.+|..+++.+.++-|...++-|....+ ...   ...|              ......+.  .++  +....|.+.+
T Consensus        17 ~d~~~G~~LaissS~~Ig~sfilkKkgl~r-~~~---~~~r--------------a~~gg~~y--l~~--~~Ww~G~ltm   74 (335)
T KOG2922|consen   17 SDNIIGLVLAISSSIFIGSSFILKKKGLKR-AGA---SGLR--------------AGEGGYGY--LKE--PLWWAGMLTM   74 (335)
T ss_pred             cCceeeeeehhhccEEEeeehhhhHHHHHH-Hhh---hccc--------------ccCCCcch--hhh--HHHHHHHHHH
Confidence            356678888999999999999998887665 111   1111              11111121  122  3334566666


Q ss_pred             HHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCCCC
Q 017672           91 TLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWY  170 (368)
Q Consensus        91 ~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~~~  170 (368)
                      ...-..-|.|..+.|++..+++.++..+..++++..++||+++..      ..+|..++++|-.++... +++.+...+.
T Consensus        75 ~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~------g~lGc~l~v~Gst~iV~h-aP~e~~i~t~  147 (335)
T KOG2922|consen   75 IVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLL------GILGCVLCVVGSTTIVIH-APKEQEIESV  147 (335)
T ss_pred             HHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHh------hhhheeEEecccEEEEEe-cCcccccccH
Confidence            777778889999999999999999999999999999999999999      999999999999998873 4332211111


Q ss_pred             hhhhhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHH----------HHH
Q 017672          171 PEIQKQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQS----------AFW  240 (368)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~  240 (368)
                      .+-.+-         ..+...   .+++.+-.....+-....|.. ....+   ...+..+.+.+..          ..+
T Consensus       148 ~el~~~---------~~~~~F---liy~~~iil~~~il~~~~~p~-~g~tn---ilvyi~i~s~iGS~tV~svKalg~ai  211 (335)
T KOG2922|consen  148 EEVWEL---------ATEPGF---LVYVIIIILIVLILIFFYAPR-YGQTN---ILVYIGICSLIGSLTVMSVKALGIAI  211 (335)
T ss_pred             HHHHHH---------hcCccH---HHHHHHHHHHHHHHheeeccc-ccccc---eeehhhHhhhhcceeeeeHHHHHHHH
Confidence            110000         001111   111111111222222222211 11112   2223333333311          111


Q ss_pred             HHHhhcCCCcccccchhhHHHHHHHHHHhhhHHHHHHHHHHhccCcceeeecch-hHHHHHHHHHHHHhccccc------
Q 017672          241 AVAAERNPSAWKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTP-FALIITAIFSAFLWKETLH------  313 (368)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~-~~pv~~~i~~~~~~~e~~~------  313 (368)
                      -.-..++.+   ...+..|..++... .+.....--.++|++..+++.++.+.+ +-..++++-+.++|.|.-.      
T Consensus       212 klt~~g~~q---l~~~~ty~~~l~~~-~~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i  287 (335)
T KOG2922|consen  212 KLTFSGNNQ---LFYPLTWIFLLVVA-TCVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDI  287 (335)
T ss_pred             HHHhcCCcc---cccHHHHHHHHHHH-HHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHH
Confidence            111222221   12223344433333 355566777789999999887777554 4566778888889987532      


Q ss_pred             chhHhHHHHHHHHHHHhhccc
Q 017672          314 WGSVGGAVLLVGGLYSVLWGK  334 (368)
Q Consensus       314 ~~~~~G~~lii~gi~~~~~~~  334 (368)
                      .....|+..++.|+.+....|
T Consensus       288 ~~~~~Gf~ti~~G~flL~~~k  308 (335)
T KOG2922|consen  288 AGELCGFVTIFLGIFLLHRTK  308 (335)
T ss_pred             HHHHHhHHHhhheeeEeeeec
Confidence            235688999999988875433

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=98.09  E-value=1.3e-06  Score=75.91  Aligned_cols=138  Identities=10%  Similarity=0.052  Sum_probs=98.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCCCcccccchhhHHHHHHHHHHh
Q 017672          190 RWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAWKLGWDIHLVSVVYCGLVI  269 (368)
Q Consensus       190 ~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~  269 (368)
                      ...+|.++...+ ..+...++..++...+ + |......++..-.+...+..+.....  .+......-  ++++=|+.+
T Consensus        35 ~p~~gl~l~~vs-~ff~~~~vv~t~~~e~-~-p~e~a~~r~l~~mlit~pcliy~~~~--v~gp~g~R~--~LiLRg~mG  107 (346)
T KOG4510|consen   35 KPNLGLLLLTVS-YFFNSCMVVSTKVLEN-D-PMELASFRLLVRMLITYPCLIYYMQP--VIGPEGKRK--WLILRGFMG  107 (346)
T ss_pred             CCccCceehhhH-HHHhhHHHhhhhhhcc-C-hhHhhhhhhhhehhhhheEEEEEeee--eecCCCcEE--EEEeehhhh
Confidence            346788888888 7777788888776655 3 36666666555555444443322222  111111111  223334433


Q ss_pred             hhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhhcccc
Q 017672          270 NGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWGKN  335 (368)
Q Consensus       270 ~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~~~~~  335 (368)
                       ..+..+++|++++.+-+.+..+....|+++.+++|.+++|+.|....+|..+.+.|+++..+...
T Consensus       108 -~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpF  172 (346)
T KOG4510|consen  108 -FTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPF  172 (346)
T ss_pred             -hhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCc
Confidence             35667899999999999999999999999999999999999999999999999999999886543

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.94  E-value=3e-05  Score=60.64  Aligned_cols=69  Identities=22%  Similarity=0.373  Sum_probs=57.5

Q ss_pred             HHHhhhHHHHHHHHHHhccCcceeeec-chhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhhccc
Q 017672          266 GLVINGITYWIQVWAIEKKGPVFIAIF-TPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWGK  334 (368)
Q Consensus       266 gi~~~~i~~~l~~~a~~~~~a~~~~~~-~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~~~~  334 (368)
                      .+++.+++++++..++|+++.+.+=.+ ..+..+.+.+.++++|||++++.+++|.++|++|++......
T Consensus        36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence            344556889999999999988665544 467888999999999999999999999999999998875433

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.91  E-value=0.00014  Score=58.81  Aligned_cols=132  Identities=14%  Similarity=0.144  Sum_probs=99.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCCCcccccchhhHHHHHHHHHHhhhHH
Q 017672          194 GALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAWKLGWDIHLVSVVYCGLVINGIT  273 (368)
Q Consensus       194 G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~i~  273 (368)
                      ..++++.++.+-++...+..++.++..+|+...+..+..+.+....+....++.  ......+.+|+  .+.|.+.+++.
T Consensus         2 ~~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p~w--~~lGG~lG~~~   77 (138)
T PF04657_consen    2 YILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRP--SLASLSSVPWW--AYLGGLLGVFF   77 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCChH--HhccHHHHHHH
Confidence            467889999999999999999988887669999999999999988888776553  22211222232  33355566677


Q ss_pred             HHHHHHHHhccCcceeee-cchhHHHHHHHHHHH-H---hcccccchhHhHHHHHHHHHHH
Q 017672          274 YWIQVWAIEKKGPVFIAI-FTPFALIITAIFSAF-L---WKETLHWGSVGGAVLLVGGLYS  329 (368)
Q Consensus       274 ~~l~~~a~~~~~a~~~~~-~~~~~pv~~~i~~~~-~---~~e~~~~~~~~G~~lii~gi~~  329 (368)
                      ..+..+.+++++++.... ...-+.+.+++++.+ .   -.+++++.+++|.+++++|+++
T Consensus        78 V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   78 VLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            778889999999877665 455567777888876 2   2468899999999999999863

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=97.91  E-value=0.00012  Score=65.21  Aligned_cols=135  Identities=15%  Similarity=0.108  Sum_probs=92.3

Q ss_pred             hhhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHH
Q 017672           10 FTASQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFG   89 (368)
Q Consensus        10 ~~~~~~~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   89 (368)
                      ..+..++++.++++++.+.....+.|..   +.++....+-...--.+.-+.+....+++.    ..|..++-++.|++-
T Consensus       133 ~~~~~kgi~~Ll~stigy~~Y~~~~~~~---~~~~~~~~lPqaiGm~i~a~i~~~~~~~~~----~~k~~~~nil~G~~w  205 (269)
T PF06800_consen  133 KSNMKKGILALLISTIGYWIYSVIPKAF---HVSGWSAFLPQAIGMLIGAFIFNLFSKKPF----FEKKSWKNILTGLIW  205 (269)
T ss_pred             ccchhhHHHHHHHHHHHHHHHHHHHHhc---CCChhHhHHHHHHHHHHHHHHHhhcccccc----cccchHHhhHHHHHH
Confidence            3456789999999999999999998873   377777665443333332333333222211    123444556666664


Q ss_pred             HHHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHH
Q 017672           90 LTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGAL  154 (368)
Q Consensus        90 ~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~  154 (368)
                       ...+.+++.+.+..+.+.+-.+.++.++...+-+.+++||+-+++  --....+|+++.++|.+
T Consensus       206 -~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~k--e~~~~~~G~~Liv~G~i  267 (269)
T PF06800_consen  206 -GIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKK--EMIYTLIGLILIVIGAI  267 (269)
T ss_pred             -HHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchh--hHHHHHHHHHHHHHhhh
Confidence             566668999999999999999999999999999999999996666  22233445555555554

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.88  E-value=0.00017  Score=66.61  Aligned_cols=128  Identities=13%  Similarity=0.037  Sum_probs=94.8

Q ss_pred             HHHHHHHHHHHhhhhCC-C--cchhHHHHHHHHHHHHHHHHHHhhcCCCcccccchhhHHHHHHHHHHhhhHHHHHHHHH
Q 017672          204 AWSLWLVLQGYIIKQYP-A--KVRLTTLQCFFSCIQSAFWAVAAERNPSAWKLGWDIHLVSVVYCGLVINGITYWIQVWA  280 (368)
Q Consensus       204 ~~a~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~i~~~l~~~a  280 (368)
                      ++..+.+.+++..++.. .  +..+++.++....+...+.......+.     .....+...+..++ ...++..+.+.+
T Consensus        11 ~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~-~~~~~~~~~~~a   84 (303)
T PF08449_consen   11 GCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPK-----SRKIPLKKYAILSF-LFFLASVLSNAA   84 (303)
T ss_pred             HHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccC-----CCcChHHHHHHHHH-HHHHHHHHHHHH
Confidence            34446677777766533 2  567888888888887776664443111     11122333444444 555777899999


Q ss_pred             HhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhhcccccc
Q 017672          281 IEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWGKNRE  337 (368)
Q Consensus       281 ~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~~~~~~~  337 (368)
                      +++++.....+.....|+.+++++.++++++.+..+++++.++.+|+.+....+.++
T Consensus        85 l~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~  141 (303)
T PF08449_consen   85 LKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSS  141 (303)
T ss_pred             HHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccccc
Confidence            999999999999999999999999999999999999999999999999887655443

; GO: 0055085 transmembrane transport

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=97.73  E-value=9.9e-05  Score=67.76  Aligned_cols=121  Identities=15%  Similarity=0.122  Sum_probs=87.6

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCCCcccccchhhHHHHHHHHHH
Q 017672          189 GRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAWKLGWDIHLVSVVYCGLV  268 (368)
Q Consensus       189 ~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~  268 (368)
                      .+...|.++++.++++.+....++|+...+.+. .....-..        ...        .   ...+.|+.    |..
T Consensus         3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~-~~~~~~~~--------~~~--------~---l~~~~W~~----G~~   58 (300)
T PF05653_consen    3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPR-GSLRAGSG--------GRS--------Y---LRRPLWWI----GLL   58 (300)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-ccccccch--------hhH--------H---HhhHHHHH----HHH
Confidence            355789999999999999999999997665432 11100000        000        0   00011221    222


Q ss_pred             hhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhhcc
Q 017672          269 INGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWG  333 (368)
Q Consensus       269 ~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~~~  333 (368)
                      ..+++..+...++...+++.++++..+..++..+++.++++|+++..++.|+++++.|..+....
T Consensus        59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~  123 (300)
T PF05653_consen   59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIF  123 (300)
T ss_pred             HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEe
Confidence            33456667778999999999999999999999999999999999999999999999998776543

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=97.72  E-value=6.5e-05  Score=57.76  Aligned_cols=110  Identities=13%  Similarity=0.106  Sum_probs=77.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017672           21 IFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTLSLNLYYVA  100 (368)
Q Consensus        21 ~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a  100 (368)
                      ++.+++||.++++.|...+. .++..-.. |..-.... +.          .  +++....++    + ...+...|++.
T Consensus         2 l~Vg~~WG~Tnpfik~g~~~-~~~~~~~~-~~~~~~~~-Ll----------~--n~~y~ipf~----l-Nq~GSv~f~~~   61 (113)
T PF10639_consen    2 LLVGILWGCTNPFIKRGSSG-LEKVKASL-QLLQEIKF-LL----------L--NPKYIIPFL----L-NQSGSVLFFLL   61 (113)
T ss_pred             eeehHHhcCchHHHHHHHhh-cCCccchH-HHHHHHHH-HH----------H--hHHHHHHHH----H-HHHHHHHHHHH
Confidence            35678999999999998875 55444331 32211111 00          0  123222222    3 34556688999


Q ss_pred             ccccChhhhhhcc-cchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHH
Q 017672          101 INYTTATFAAATT-NTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVF  156 (368)
Q Consensus       101 l~~~~~~~~~~i~-~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li  156 (368)
                      +...+.+.+.++. ++.=++|++.++++.+|..+++      .++|+.+++.|+.+.
T Consensus        62 L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~------~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   62 LGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRR------TWLGMALILAGVALC  112 (113)
T ss_pred             HhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchh------HHHHHHHHHcCeeee
Confidence            9999999999885 7899999999998888887888      999999999998764

Many members are annotated as potential transmembrane proteins.

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=97.66  E-value=0.014  Score=53.54  Aligned_cols=301  Identities=12%  Similarity=0.074  Sum_probs=170.7

Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhh-hccC----CCCCCHHHHHHHHHHH
Q 017672           12 ASQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFL-ESQN----ASPLSYSSVCKIFLVS   86 (368)
Q Consensus        12 ~~~~~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~-~~~~----~~~~~~~~~~~~~~~g   86 (368)
                      ....|+++..++.++-|...+..|...+  .+--..=....+++. +.+|+.... .-+.    ....+........+.|
T Consensus         4 ~ii~Gii~h~iGg~~~~sfy~P~kkvk~--WsWEs~Wlv~gi~sw-li~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G   80 (344)
T PF06379_consen    4 AIILGIIFHAIGGFASGSFYVPFKKVKG--WSWESYWLVQGIFSW-LIVPWLWALLAIPDFFSIYSATPASTLFWTFLFG   80 (344)
T ss_pred             hHHHHHHHHHHHHHHhhhhccchhhcCC--ccHHHHHHHHHHHHH-HHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHH
Confidence            3567999999999999999999997633  553333233333333 334443211 1111    1122345566667777


Q ss_pred             HHHHHHHHHHHHHhccccChhhhh-hcccchhHHHHHHHHHHhccccc-ccccccccchhhHHHhHHhHHHHhhhcCCCC
Q 017672           87 LFGLTLSLNLYYVAINYTTATFAA-ATTNTIPAITFVLAGLLRIESIS-IKYLHGIAKVLGSVVSVSGALVFAFVKGPPL  164 (368)
Q Consensus        87 ~~~~~~~~~~~~~al~~~~~~~~~-~i~~~~p~~~~ll~~~~~~e~~~-~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~  164 (368)
                      ++- ......|-.+++|+..+... +...+.-++-.++-.++.++--. ...+-....++|++++++|+.++......++
T Consensus        81 ~lW-GIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke  159 (344)
T PF06379_consen   81 VLW-GIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMKE  159 (344)
T ss_pred             HHH-hcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhhh
Confidence            775 44555888999999988766 44456667777776665432100 0011123378999999999999976322111


Q ss_pred             CCCCCChhhhhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh-------hhCCCcch----hHHHHHHHH
Q 017672          165 RFLNWYPEIQKQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYII-------KQYPAKVR----LTTLQCFFS  233 (368)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~-------~~~~~~~~----~~~~~~~~~  233 (368)
                      +               +...+..+.+..+|++.++.++++.|.++.-.....       +...+|+.    .....+.-+
T Consensus       160 ~---------------~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~GG  224 (344)
T PF06379_consen  160 K---------------ELGEEAKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVVLWGG  224 (344)
T ss_pred             h---------------hhccchhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhhhhhH
Confidence            1               001112345677999999999999999887653211       11111121    223334445


Q ss_pred             HHHHHHHHHHhhc---CCC---cccccc---hhhHHHHHHHHHHhhhHHHHHHHHHHhccCcc----eeeecchhHHHHH
Q 017672          234 CIQSAFWAVAAER---NPS---AWKLGW---DIHLVSVVYCGLVINGITYWIQVWAIEKKGPV----FIAIFTPFALIIT  300 (368)
Q Consensus       234 ~~~~~~~~~~~~~---~~~---~~~~~~---~~~~~~l~~~gi~~~~i~~~l~~~a~~~~~a~----~~~~~~~~~pv~~  300 (368)
                      .+.-+.+++....   +.+   +.....   ..+....++.|+ .=..++++|..+-.++++.    --.+.+.+..+++
T Consensus       225 f~tN~~yc~~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~-lWy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~s  303 (344)
T PF06379_consen  225 FITNLIYCLILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGV-LWYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFS  303 (344)
T ss_pred             HHHHHHHHHHHHhhcCCCccccccccccchhHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHH
Confidence            5555666544321   111   111111   122233333333 2234566666777777743    2334677778888


Q ss_pred             HHHHHHHhcc------cccchhHhHHHHHHHHHHHhhcc
Q 017672          301 AIFSAFLWKE------TLHWGSVGGAVLLVGGLYSVLWG  333 (368)
Q Consensus       301 ~i~~~~~~~e------~~~~~~~~G~~lii~gi~~~~~~  333 (368)
                      -+.+.+ ++|      +.-..-++|+++++.++.++-++
T Consensus       304 nvwGl~-lkEWKg~s~kt~~vl~~G~~vlI~s~~ivG~G  341 (344)
T PF06379_consen  304 NVWGLI-LKEWKGASKKTIRVLVLGIAVLILSVVIVGYG  341 (344)
T ss_pred             HHHHHH-HHHhccCCcccHHHHHHHHHHHHHHHHHHhcc
Confidence            888876 665      34445678999998888776544

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.65  E-value=0.00066  Score=54.87  Aligned_cols=139  Identities=13%  Similarity=0.140  Sum_probs=97.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCCCcccccchhhHHHHHHHHHHhhh
Q 017672          192 IKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAWKLGWDIHLVSVVYCGLVING  271 (368)
Q Consensus       192 ~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~  271 (368)
                      ....++++.++.+-.+..-...++.+..++|....+..+..+.+.+..+.+..+.. ..+....+..|+.  +.|.+..+
T Consensus         4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~-~~~a~~~~~pwW~--~~GG~lGa   80 (150)
T COG3238           4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGH-PGLAAVASAPWWA--WIGGLLGA   80 (150)
T ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCC-CchhhccCCchHH--HHccchhh
Confidence            56788999999999999999999988888779999999999999888877664332 2222222223332  22323333


Q ss_pred             HHHHHHHHHHhccCcce-eeecchhHHHHHHHHHHHHhc----ccccchhHhHHHHHHHHHHHhhcc
Q 017672          272 ITYWIQVWAIEKKGPVF-IAIFTPFALIITAIFSAFLWK----ETLHWGSVGGAVLLVGGLYSVLWG  333 (368)
Q Consensus       272 i~~~l~~~a~~~~~a~~-~~~~~~~~pv~~~i~~~~~~~----e~~~~~~~~G~~lii~gi~~~~~~  333 (368)
                      +-...-....++.+++. ......-+.+.+++++-+=+.    .+++...++|++++++|+++..+.
T Consensus        81 ~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~  147 (150)
T COG3238          81 IFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRF  147 (150)
T ss_pred             hhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhccc
Confidence            44445556677777754 444666777788888877654    578999999999999996665543

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.64  E-value=0.0002  Score=55.24  Aligned_cols=67  Identities=9%  Similarity=0.228  Sum_probs=55.3

Q ss_pred             HHhhhHHHHHHHHHHhccCcceeeec-chhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhhcc
Q 017672          267 LVINGITYWIQVWAIEKKGPVFIAIF-TPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWG  333 (368)
Q Consensus       267 i~~~~i~~~l~~~a~~~~~a~~~~~~-~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~~~  333 (368)
                      +++.+++++++..++++++.+.+=.+ ..+..+.+.+.++++|||++++.+++|+++|++|++.....
T Consensus        37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~  104 (110)
T PRK09541         37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            34556788889999999887655443 45678888999999999999999999999999999988543

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.52  E-value=0.00026  Score=55.41  Aligned_cols=68  Identities=22%  Similarity=0.161  Sum_probs=60.2

Q ss_pred             HHHHHHHHHHHHHHHhccccChhhhhhcc-cchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhh
Q 017672           85 VSLFGLTLSLNLYYVAINYTTATFAAATT-NTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAF  158 (368)
Q Consensus        85 ~g~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~  158 (368)
                      ..+.....++.++..++++.|.+.+-.+. ...-+.+.+++.++++|++++.      +++|+.++++|++++-.
T Consensus        35 ~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~------~~~gi~lIi~GVi~l~l  103 (120)
T PRK10452         35 LMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLM------KIAGLTTLVAGIVLIKS  103 (120)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHhhc
Confidence            34455677888999999999999998876 5889999999999999999999      99999999999999854

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.48  E-value=0.00031  Score=53.10  Aligned_cols=65  Identities=26%  Similarity=0.229  Sum_probs=57.5

Q ss_pred             HHHHHHHHHHHHHhccccChhhhhhcc-cchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHh
Q 017672           87 LFGLTLSLNLYYVAINYTTATFAAATT-NTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFA  157 (368)
Q Consensus        87 ~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~  157 (368)
                      +.++..++.+.-.++++.|.+.+-.+. ..-.+.+++.++++++|+++..      +++++.+.++|++.+-
T Consensus        37 ~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~------~~~gl~LiiaGvi~Lk  102 (106)
T COG2076          37 IVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLI------KLLGLALILAGVIGLK  102 (106)
T ss_pred             HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHH------HHHHHHHHHHHHHHhh
Confidence            445677888999999999999887655 4888899999999999999999      9999999999999884

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.48  E-value=0.002  Score=52.03  Aligned_cols=130  Identities=14%  Similarity=0.148  Sum_probs=94.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 017672           17 YIAMIFVQFAYAGMALFSKAAIAKGMN-PFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTLSLN   95 (368)
Q Consensus        17 ~~~~~l~~~~~~~~~~~~k~~~~~g~~-~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   95 (368)
                      .++++++..+-+....+.-.+.++ .+ |+.-+++.+..+.+.+..+....+++..+..+.-.|+ ...-|+++ .....
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~~~-~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w-~~lGG~lG-~~~V~   79 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLGKA-LGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWW-AYLGGLLG-VFFVL   79 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH-hCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChH-HhccHHHH-HHHHH
Confidence            567788888888888888888877 65 9999999999999999888877665433322212222 23355555 55555


Q ss_pred             HHHHhccccChhhhhhcccchhHHHHHHHHH-----HhcccccccccccccchhhHHHhHHhHHH
Q 017672           96 LYYVAINYTTATFAAATTNTIPAITFVLAGL-----LRIESISIKYLHGIAKVLGSVVSVSGALV  155 (368)
Q Consensus        96 ~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~-----~~~e~~~~~~~~~~~~~~gi~l~~~Gv~l  155 (368)
                      +........+++.+..+.-+.-+...++-=-     .-|++++.+      +.+|+++.++|+.+
T Consensus        80 ~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~------r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   80 SNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLR------RILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHH------HHHHHHHHHHHHhC
Confidence            7778889999998887776666655555422     356777777      99999999999864

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.43  E-value=0.00048  Score=53.13  Aligned_cols=67  Identities=15%  Similarity=0.175  Sum_probs=58.6

Q ss_pred             HHHHHHHHHHHHHHhccccChhhhhhcc-cchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhh
Q 017672           86 SLFGLTLSLNLYYVAINYTTATFAAATT-NTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAF  158 (368)
Q Consensus        86 g~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~  158 (368)
                      .+.+...++.++..+++..|.+.+-.+. ...-+.+.++++++++|++++.      +++|+.++++|++++-.
T Consensus        36 ~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~------~~~gi~lIi~GVi~l~l  103 (110)
T PRK09541         36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLP------AIIGMMLICAGVLVINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHhc
Confidence            3455677888889999999999998775 4788899999999999999999      99999999999999854

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=97.38  E-value=0.00051  Score=62.98  Aligned_cols=139  Identities=17%  Similarity=0.277  Sum_probs=111.1

Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHh---cCCChHHHHHHHHHHHHHHHH-HHHhhhhccCC---C--CCCHHHHHHH
Q 017672           12 ASQKPYIAMIFVQFAYAGMALFSKAAIA---KGMNPFVFVVYRQAFASLALS-PFAFFLESQNA---S--PLSYSSVCKI   82 (368)
Q Consensus        12 ~~~~~~~~~~l~~~~~~~~~~~~k~~~~---~g~~~~~~~~~r~~~~~l~l~-~~~~~~~~~~~---~--~~~~~~~~~~   82 (368)
                      =+..|..+++.+.+..+...++.|....   +.++++....+..-++..+++ |+....+....   .  ..+.. ....
T Consensus       160 fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~-~~~~  238 (316)
T KOG1441|consen  160 FNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVT-FLIL  238 (316)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchh-hHHH
Confidence            4678999999999999999999999883   248999999998889999888 88776554332   1  11223 3333


Q ss_pred             HHHHHHHHHHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhh
Q 017672           83 FLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAF  158 (368)
Q Consensus        83 ~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~  158 (368)
                      ...+++.... +...|..+..+++-..++...+.-.++...++++++|++++.      +..|.+++++|+.+-..
T Consensus       239 ~~~sv~~f~~-Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~------n~~G~~iai~Gv~~Y~~  307 (316)
T KOG1441|consen  239 LLNSVLAFLL-NLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFL------NALGYAIAILGVFLYSR  307 (316)
T ss_pred             HHHHHHHHHH-HHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchh------hHHHHHHHHHHHHHHHH
Confidence            4444555444 457888999999999999999998889999999999999999      99999999999998754

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.35  E-value=0.0021  Score=49.34  Aligned_cols=64  Identities=17%  Similarity=0.098  Sum_probs=56.3

Q ss_pred             HHHHHHHHHHHHHhccccChhhhhhccc-chhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHH
Q 017672           87 LFGLTLSLNLYYVAINYTTATFAAATTN-TIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVF  156 (368)
Q Consensus        87 ~~~~~~~~~~~~~al~~~~~~~~~~i~~-~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li  156 (368)
                      ..+...++.+...++++.|.+.+-.+.. ...+.+.+.+.+++||++++.      +++|+.+++.|++.+
T Consensus        42 ~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~------~~~gi~lIi~GVi~l  106 (109)
T PRK10650         42 LAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRK------GWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHh
Confidence            3445677888899999999998886655 888899999999999999999      999999999999986

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.34  E-value=0.00058  Score=51.65  Aligned_cols=65  Identities=22%  Similarity=0.350  Sum_probs=54.8

Q ss_pred             hhhHHHHHHHHHHhccCcc-eeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhhcc
Q 017672          269 INGITYWIQVWAIEKKGPV-FIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWG  333 (368)
Q Consensus       269 ~~~i~~~l~~~a~~~~~a~-~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~~~  333 (368)
                      +..++|.+...++|+++.. -.++-.-...+.+.+.++++|+|+.++.+++|.+++++|+......
T Consensus        39 ~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~  104 (106)
T COG2076          39 GYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG  104 (106)
T ss_pred             HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence            4457889999999998864 3456667778889999999999999999999999999999887653

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.26  E-value=0.00084  Score=51.28  Aligned_cols=65  Identities=17%  Similarity=0.186  Sum_probs=54.6

Q ss_pred             HHhhhHHHHHHHHHHhccCcce-eeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhh
Q 017672          267 LVINGITYWIQVWAIEKKGPVF-IAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVL  331 (368)
Q Consensus       267 i~~~~i~~~l~~~a~~~~~a~~-~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~  331 (368)
                      +++..++++++..++|+++... .++-.-+..+.+.+.++++|||++++.+++|..++++|++...
T Consensus        36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~  101 (105)
T PRK11431         36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence            3355688999999999988754 3445557888999999999999999999999999999998764

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.24  E-value=0.0011  Score=50.56  Aligned_cols=65  Identities=18%  Similarity=0.082  Sum_probs=57.5

Q ss_pred             HHHHHHHHHHHHHhccccChhhhhhccc-chhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHh
Q 017672           87 LFGLTLSLNLYYVAINYTTATFAAATTN-TIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFA  157 (368)
Q Consensus        87 ~~~~~~~~~~~~~al~~~~~~~~~~i~~-~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~  157 (368)
                      +.+...++.+...+++..|.+.+-.+.. ...+.+.+++.+++||++++.      +++++.+.++|++.+-
T Consensus        36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~------~~~gi~lIi~GVv~l~  101 (105)
T PRK11431         36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPA------RLLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHhhh
Confidence            4456778888999999999998886665 888999999999999999999      9999999999999883

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.16  E-value=0.015  Score=54.11  Aligned_cols=147  Identities=15%  Similarity=0.050  Sum_probs=94.5

Q ss_pred             hhhhhhhHHHHHHHHHHHHHHH-------HHHHHHHhcCCChHHHHHHHHH---HHHHH-HHHHHhhh--hccCCC----
Q 017672           10 FTASQKPYIAMIFVQFAYAGMA-------LFSKAAIAKGMNPFVFVVYRQA---FASLA-LSPFAFFL--ESQNAS----   72 (368)
Q Consensus        10 ~~~~~~~~~~~~l~~~~~~~~~-------~~~k~~~~~g~~~~~~~~~r~~---~~~l~-l~~~~~~~--~~~~~~----   72 (368)
                      ..+..||++.++++.+..+..+       +..+.+.+.|.++.....-.+.   ++..+ -+.++...  +.+..+    
T Consensus       169 ~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~~~~~~~  248 (345)
T PRK13499        169 EFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKNKDLSLKAD  248 (345)
T ss_pred             ccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchh
Confidence            3567899999999999999998       6777665567787766655554   33332 22333321  111111    


Q ss_pred             C-CCHHHHHHH----HHHHHHHHHHHHHHHHHhccccChhhhhh---cc-cchhHHHHHHHHHHhcccccccccccccch
Q 017672           73 P-LSYSSVCKI----FLVSLFGLTLSLNLYYVAINYTTATFAAA---TT-NTIPAITFVLAGLLRIESISIKYLHGIAKV  143 (368)
Q Consensus        73 ~-~~~~~~~~~----~~~g~~~~~~~~~~~~~al~~~~~~~~~~---i~-~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~  143 (368)
                      + .+++.+.+-    .+.|++- ...+.+|..+-...+.+.+..   +. ++..++..+-+. ++||+-+..||..+..+
T Consensus       249 ~~~~~~~~~~n~l~~~l~G~~W-~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~  326 (345)
T PRK13499        249 FSLAKPLLITNVLLSALAGVMW-YLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLS  326 (345)
T ss_pred             ccccchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHH
Confidence            1 111222333    4444443 555667777777775554444   55 555566666666 69999887788889999


Q ss_pred             hhHHHhHHhHHHHhh
Q 017672          144 LGSVVSVSGALVFAF  158 (368)
Q Consensus       144 ~gi~l~~~Gv~li~~  158 (368)
                      +|+++.++|+.++..
T Consensus       327 ~G~vliI~g~~lig~  341 (345)
T PRK13499        327 LGCVVIILAANIVGL  341 (345)
T ss_pred             HHHHHHHHHHHHHhh
Confidence            999999999999865

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.15  E-value=0.0014  Score=50.42  Aligned_cols=63  Identities=17%  Similarity=0.158  Sum_probs=52.9

Q ss_pred             hhhHHHHHHHHHHhccCcce-eeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhh
Q 017672          269 INGITYWIQVWAIEKKGPVF-IAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVL  331 (368)
Q Consensus       269 ~~~i~~~l~~~a~~~~~a~~-~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~  331 (368)
                      +..+++++...++|+++... .++-..+..+.+.+.++++|||++++.+++|.++++.|+....
T Consensus        44 ~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         44 AVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            44678899999999988744 3445567778889999999999999999999999999988753

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=97.05  E-value=0.0016  Score=58.04  Aligned_cols=79  Identities=22%  Similarity=0.273  Sum_probs=66.6

Q ss_pred             hHHHHHHHHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhhcccccc
Q 017672          258 HLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWGKNRE  337 (368)
Q Consensus       258 ~~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~~~~~~~  337 (368)
                      +.+....-++ .-.++..+.+.++++.+|+...++..+..+++.++++++++.+++..||++..+++.|+.+........
T Consensus        16 ~~~~~~vPA~-lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~   94 (244)
T PF04142_consen   16 DTLKLAVPAL-LYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS   94 (244)
T ss_pred             HHHHHHHHHH-HHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence            3344444444 345778899999999999999999999999999999999999999999999999999999887655443

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=96.92  E-value=0.011  Score=52.54  Aligned_cols=192  Identities=16%  Similarity=0.077  Sum_probs=116.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 017672           16 PYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTLSLN   95 (368)
Q Consensus        16 ~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   95 (368)
                      |++..+++.+++|.+++-.|.- +. -|++.+.++......+.-+.+...++.   ++.    +..-++-|.+ .+.++.
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~-~~-gDg~~fQw~~~~~i~~~g~~v~~~~~~---p~f----~p~amlgG~l-W~~gN~   70 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKF-DT-GDGFFFQWVMCSGIFLVGLVVNLILGF---PPF----YPWAMLGGAL-WATGNI   70 (254)
T ss_pred             CchhHHHHHHHhcccceeeEec-cC-CCcHHHHHHHHHHHHHHHHHHHHhcCC---Ccc----eeHHHhhhhh-hhcCce
Confidence            5678899999999999999965 44 588888888777666666655554332   221    2223333444 455666


Q ss_pred             HHHHhccccChhhhhhcccchhHHHHHHH-HH-HhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCCCC---
Q 017672           96 LYYVAINYTTATFAAATTNTIPAITFVLA-GL-LRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWY---  170 (368)
Q Consensus        96 ~~~~al~~~~~~~~~~i~~~~p~~~~ll~-~~-~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~~~---  170 (368)
                      +-.-.++..+.+....+.++.-+.+.-.. .+ +++++.... ...+..++|++++++|..+...-+.+..+..++.   
T Consensus        71 ~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~-~~~~Ln~~G~~l~~~~~~~f~fik~~~~~~~~~~~~~  149 (254)
T PF07857_consen   71 LVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVP-SSPWLNYIGVALVLVSGIIFSFIKSEEKEPKKSSEET  149 (254)
T ss_pred             eehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceecccccccc-chhHHHHHHHHHHHHHHHheeeecCCCCCcccccccc
Confidence            77888999999999988887555554443 22 454433222 2345578999999999988866333321110000   


Q ss_pred             ---hh---hhhcccCCC-CCCC----CCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 017672          171 ---PE---IQKQVSESS-PTND----CPIGRWIKGALIMISANTAWSLWLVLQGYIIKQ  218 (368)
Q Consensus       171 ---~~---~~~~~~~~~-~~~~----~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~  218 (368)
                         .+   ..++++..+ +++.    ...++...|..++++++++|+...+=.....++
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~S~vd~l~~~~~RivG~~LAv~aGvlyGs~fvPv~Yi~~~  208 (254)
T PF07857_consen  150 PLSIEDVIEIEDDSENSEDSSWVDELSPRKKRIVGIILAVFAGVLYGSNFVPVIYIQDH  208 (254)
T ss_pred             ccccccccccccccccccccccccccccccchhHhHHHHHHHHHHHhcccchHHHHHhC
Confidence               00   000110000 1110    112246789999999999999988777776444

The region concerned is approximately 280 residues long.

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=96.82  E-value=0.01  Score=45.70  Aligned_cols=108  Identities=11%  Similarity=0.047  Sum_probs=76.3

Q ss_pred             HHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCCCcccccchhhHHHHHHHHHHhhhHHHHHHHH
Q 017672          200 SANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAWKLGWDIHLVSVVYCGLVINGITYWIQVW  279 (368)
Q Consensus       200 ~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~i~~~l~~~  279 (368)
                      +-+++|+..+-+.||..+..++ ..-.. +..-... .    ++.             .|-.  .+....+..+-..|++
T Consensus         3 ~Vg~~WG~Tnpfik~g~~~~~~-~~~~~-~~~~~~~-~----Ll~-------------n~~y--~ipf~lNq~GSv~f~~   60 (113)
T PF10639_consen    3 LVGILWGCTNPFIKRGSSGLEK-VKASL-QLLQEIK-F----LLL-------------NPKY--IIPFLLNQSGSVLFFL   60 (113)
T ss_pred             eehHHhcCchHHHHHHHhhcCC-ccchH-HHHHHHH-H----HHH-------------hHHH--HHHHHHHHHHHHHHHH
Confidence            4578999999999999887664 22221 2111111 1    110             1111  1133344566778899


Q ss_pred             HHhccCcceeeec-chhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHH
Q 017672          280 AIEKKGPVFIAIF-TPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYS  329 (368)
Q Consensus       280 a~~~~~a~~~~~~-~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~  329 (368)
                      .+.+.+-+.+.++ +.+.-+++++.++++.+|..++..++|+++++.|+.+
T Consensus        61 ~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L  111 (113)
T PF10639_consen   61 LLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL  111 (113)
T ss_pred             HHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence            9999999999998 5999999999999888888899999999999999765

Many members are annotated as potential transmembrane proteins.

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.80  E-value=0.0021  Score=48.09  Aligned_cols=56  Identities=20%  Similarity=0.344  Sum_probs=34.3

Q ss_pred             HhhhHHHHHHHHHHhccCccee-eecchhHHHHHHHHHHHHhcccccchhHhHHHHH
Q 017672          268 VINGITYWIQVWAIEKKGPVFI-AIFTPFALIITAIFSAFLWKETLHWGSVGGAVLL  323 (368)
Q Consensus       268 ~~~~i~~~l~~~a~~~~~a~~~-~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~li  323 (368)
                      .+..+++.++..++|+.+.+.+ ++...+..+.+.+.+.++|||++|+.+++|..+|
T Consensus        37 ~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   37 VGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            3556888999999999998777 4455688999999999999999999999999886

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.74  E-value=0.0029  Score=47.41  Aligned_cols=57  Identities=21%  Similarity=0.123  Sum_probs=34.9

Q ss_pred             HHHHHHHHHHHHHhccccChhhhhhcc-cchhHHHHHHHHHHhcccccccccccccchhhHHHh
Q 017672           87 LFGLTLSLNLYYVAINYTTATFAAATT-NTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVS  149 (368)
Q Consensus        87 ~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~  149 (368)
                      +.+...++.++..++++.|.+.+-.+. .+..+.+.+++.++++|+++..      |++|+.++
T Consensus        36 ~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~------~~~gi~lI   93 (93)
T PF00893_consen   36 VVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLS------KWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHhheeeC
Confidence            445677888999999999999997665 5999999999999999999999      99998763

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=96.72  E-value=0.012  Score=54.23  Aligned_cols=142  Identities=15%  Similarity=0.181  Sum_probs=109.9

Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHHHHHhc---CCChHHHHHHHHHHHHHHHHHHHhhhh---ccCCCCCCHHHHHHHHH
Q 017672           11 TASQKPYIAMIFVQFAYAGMALFSKAAIAK---GMNPFVFVVYRQAFASLALSPFAFFLE---SQNASPLSYSSVCKIFL   84 (368)
Q Consensus        11 ~~~~~~~~~~~l~~~~~~~~~~~~k~~~~~---g~~~~~~~~~r~~~~~l~l~~~~~~~~---~~~~~~~~~~~~~~~~~   84 (368)
                      .+...|-++++++++++|...++.|.=.++   .++--.+.-+-.++..++++|..+...   .++..-++..+...+++
T Consensus       243 ~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~  322 (416)
T KOG2765|consen  243 SRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVVF  322 (416)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeeeH
Confidence            466889999999999999999999985543   256556666666777777776554332   23333334556666788


Q ss_pred             HHHHHHHHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhh
Q 017672           85 VSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAF  158 (368)
Q Consensus        85 ~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~  158 (368)
                      .+.++...+-.+|..|.-.+++-.+++-.++.....++.=.++-+..+++.      .++|.+.+++|.+++..
T Consensus       323 ~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~------~iiGsi~Ifv~Fv~vn~  390 (416)
T KOG2765|consen  323 NNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSAL------YIIGSIPIFVGFVIVNI  390 (416)
T ss_pred             hhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHhheec
Confidence            888999999999999999999999999888776666676677766667777      99999999999999865

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=96.51  E-value=0.0032  Score=55.96  Aligned_cols=132  Identities=12%  Similarity=-0.018  Sum_probs=76.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCCCcccccchhhHHHHHHHHHHhhhHH
Q 017672          194 GALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAWKLGWDIHLVSVVYCGLVINGIT  273 (368)
Q Consensus       194 G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~i~  273 (368)
                      |.+.+++|+++++-..+=.||.- ..|. .....+++....+...+..+..+.+  .        +..+..+|...=..+
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~~-~gDg-~~fQw~~~~~i~~~g~~v~~~~~~p--~--------f~p~amlgG~lW~~g   68 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKFD-TGDG-FFFQWVMCSGIFLVGLVVNLILGFP--P--------FYPWAMLGGALWATG   68 (254)
T ss_pred             CchhHHHHHHHhcccceeeEecc-CCCc-HHHHHHHHHHHHHHHHHHHHhcCCC--c--------ceeHHHhhhhhhhcC
Confidence            56778999999999999888753 3343 5555555555555445444333221  1        112222232223344


Q ss_pred             HHHHHHHHhccCcceeeecch-hHHHHHHHHHHH-Hhcccc-----cchhHhHHHHHHHHHHHhhcccccc
Q 017672          274 YWIQVWAIEKKGPVFIAIFTP-FALIITAIFSAF-LWKETL-----HWGSVGGAVLLVGGLYSVLWGKNRE  337 (368)
Q Consensus       274 ~~l~~~a~~~~~a~~~~~~~~-~~pv~~~i~~~~-~~~e~~-----~~~~~~G~~lii~gi~~~~~~~~~~  337 (368)
                      ..+-.-.+|.++-...-.+-. .+.+.+...+-+ +||+.+     .+..++|++++++|..+...-|.++
T Consensus        69 N~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~  139 (254)
T PF07857_consen   69 NILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEE  139 (254)
T ss_pred             ceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence            455556666666655544443 356666666544 455432     5667899999999988876655544

The region concerned is approximately 280 residues long.

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=96.32  E-value=0.16  Score=46.78  Aligned_cols=142  Identities=18%  Similarity=0.123  Sum_probs=92.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhCCC---cchhHHHHHHHHHHHHHHHHHHhhc---C--CCccc---ccchhhHHH
Q 017672          193 KGALIMISANTAWSLWLVLQGYIIKQYPA---KVRLTTLQCFFSCIQSAFWAVAAER---N--PSAWK---LGWDIHLVS  261 (368)
Q Consensus       193 ~G~~~~l~a~~~~a~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~---~~~~~~~~~  261 (368)
                      .-.+..+...+.++......|...+..++   |.+..+..-+.-.+.+....+..+.   +  .....   ...+.+...
T Consensus        15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk   94 (345)
T KOG2234|consen   15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK   94 (345)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence            44455555666667777666665443222   2455555555555555555534321   1  11100   111112222


Q ss_pred             HHHHHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhhcccc
Q 017672          262 VVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWGKN  335 (368)
Q Consensus       262 l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~~~~~  335 (368)
                      +..-+. .-.+.+-+++.++.+.+|+...+...+..+.+.++..+++++++++.||...++.+.|+.++.....
T Consensus        95 ~~vPa~-iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~  167 (345)
T KOG2234|consen   95 VSVPAL-IYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSL  167 (345)
T ss_pred             HHHHHH-HHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCC
Confidence            222222 3345666999999999999999999999999999999999999999999999999999999884433

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=96.31  E-value=0.0018  Score=56.23  Aligned_cols=132  Identities=14%  Similarity=0.068  Sum_probs=86.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCCCcccccchhhHHHHHHHHHHhhhHH
Q 017672          194 GALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAWKLGWDIHLVSVVYCGLVINGIT  273 (368)
Q Consensus       194 G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~i~  273 (368)
                      .++.+++=++.|+..-....|...+   |.+.+.-..+.+.+..+.+.++..+.   .   +...+..-+..|. .=.++
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~GG~---p~qQ~lGtT~GALifaiiv~~~~~p~---~---T~~~~iv~~isG~-~Ws~G   72 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKFGGK---PYQQTLGTTLGALIFAIIVFLFVSPE---L---TLTIFIVGFISGA-FWSFG   72 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeecCCC---hhHhhhhccHHHHHHHHHHheeecCc---c---chhhHHHHHHhhh-Hhhhh
Confidence            5678889999999888776664333   35555444444444444443332111   1   1112223233344 33478


Q ss_pred             HHHHHHHHhccCcceeeecc-hhHHHHHHHHHHHHhcccccchhH----hHHHHHHHHHHHhhcccc
Q 017672          274 YWIQVWAIEKKGPVFIAIFT-PFALIITAIFSAFLWKETLHWGSV----GGAVLLVGGLYSVLWGKN  335 (368)
Q Consensus       274 ~~l~~~a~~~~~a~~~~~~~-~~~pv~~~i~~~~~~~e~~~~~~~----~G~~lii~gi~~~~~~~~  335 (368)
                      +..++++.+..+.+++.++. -++.+-+.+++.++|||..+..+.    +..++++.|+++..++++
T Consensus        73 Q~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~  139 (288)
T COG4975          73 QANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDR  139 (288)
T ss_pred             hhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecc
Confidence            89999999999999999865 477888899999999999988775    456677788887766444

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=96.03  E-value=0.082  Score=47.61  Aligned_cols=140  Identities=10%  Similarity=0.086  Sum_probs=109.6

Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHhhhhccCCC-----CCCHHHHHHHHHH
Q 017672           12 ASQKPYIAMIFVQFAYAGMALFSKAAIAK-GMNPFVFVVYRQAFASLALSPFAFFLESQNAS-----PLSYSSVCKIFLV   85 (368)
Q Consensus        12 ~~~~~~~~~~l~~~~~~~~~~~~k~~~~~-g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~   85 (368)
                      +...|+.++....++-|+.+..-..+.++ +++++.+.+.-.++.++.-....+.... .++     +..+.-++-+++.
T Consensus       169 ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~-~~~av~F~~~hp~~~~Di~l~  247 (327)
T KOG1581|consen  169 NSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGH-LLPAVSFIKEHPDVAFDILLY  247 (327)
T ss_pred             CchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCC-CchHHHHHHcChhHHHHHHHH
Confidence            46679999999999999998888877754 7999999999999888887776543322 122     1234455566777


Q ss_pred             HHHHHHHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhh
Q 017672           86 SLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFV  159 (368)
Q Consensus        86 g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~  159 (368)
                      +.++ +.++.+.++-++.-++-.-+.|..+--++..+++.+.++.++++.      |+.|+.+.+.|+.+=...
T Consensus       248 s~~g-avGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~------q~~g~~iVFg~i~l~~~~  314 (327)
T KOG1581|consen  248 STCG-AVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSE------QWLGVLIVFGGIFLEILL  314 (327)
T ss_pred             HHhh-hhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchh------hccCeeeehHHHHHHHHH
Confidence            7776 556667778888877777788888899999999999999999999      999999999999886553

>TIGR00803 nst UDP-galactose transporter

Probab=95.50  E-value=0.044  Score=48.10  Aligned_cols=59  Identities=14%  Similarity=-0.003  Sum_probs=52.5

Q ss_pred             HHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHH
Q 017672           91 TLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALV  155 (368)
Q Consensus        91 ~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~l  155 (368)
                      +....+....++|.+....+....+.++++.+++.++++|+++..      ++.|+.+.+.|+.+
T Consensus       163 a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~------~~~g~~lV~~~~~l  221 (222)
T TIGR00803       163 VGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISST------FYLGAILVFLATFL  221 (222)
T ss_pred             HhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHH------HHHHHHHHHeeeEe
Confidence            445557788899999999999999999999999999999999999      99999999988653

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=95.42  E-value=0.0063  Score=55.00  Aligned_cols=127  Identities=20%  Similarity=0.221  Sum_probs=93.7

Q ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCCCcccccchhhHHHHHHHH
Q 017672          187 PIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAWKLGWDIHLVSVVYCG  266 (368)
Q Consensus       187 ~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g  266 (368)
                      ...++..|..+++.+.+..+...++.||..++...    ...+             .-++.   .+...  +  .+-+.|
T Consensus        15 ~~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~----~~~r-------------a~~gg---~~yl~--~--~~Ww~G   70 (335)
T KOG2922|consen   15 MSSDNIIGLVLAISSSIFIGSSFILKKKGLKRAGA----SGLR-------------AGEGG---YGYLK--E--PLWWAG   70 (335)
T ss_pred             hccCceeeeeehhhccEEEeeehhhhHHHHHHHhh----hccc-------------ccCCC---cchhh--h--HHHHHH
Confidence            34566789999999999999999999987666421    0000             01111   11111  1  122335


Q ss_pred             HHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhhcccccc
Q 017672          267 LVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWGKNRE  337 (368)
Q Consensus       267 i~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~~~~~~~  337 (368)
                      .+..+++-.+-+.+....+++.++.+..++.+++.+++.++++|++++...+|+++.++|..+.+....++
T Consensus        71 ~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e  141 (335)
T KOG2922|consen   71 MLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKE  141 (335)
T ss_pred             HHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcc
Confidence            56666777778888888999999999999999999999999999999999999999999987776544433

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.40  E-value=0.3  Score=39.67  Aligned_cols=140  Identities=11%  Similarity=0.010  Sum_probs=79.7

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHHH
Q 017672           13 SQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTL   92 (368)
Q Consensus        13 ~~~~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   92 (368)
                      ....++..+++..+-.....+.-.+.++.-+|+.-.+..+.++.+++..+.+..+++......++.-++...-|+++ +.
T Consensus         3 ~~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lG-a~   81 (150)
T COG3238           3 MYLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLG-AI   81 (150)
T ss_pred             cHHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchh-hh
Confidence            45567778888888888888888877773359999999999999988888876433211111112122222233333 22


Q ss_pred             HHHHHHHhccccChhhhhhcccchhHHHHHHH-HH-HhcccccccccccccchhhHHHhHHhHHHH
Q 017672           93 SLNLYYVAINYTTATFAAATTNTIPAITFVLA-GL-LRIESISIKYLHGIAKVLGSVVSVSGALVF  156 (368)
Q Consensus        93 ~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~-~~-~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li  156 (368)
                      .-...........++....+.-..-+...++- .+ ++++   .+|+++..+++|+++.++|+.++
T Consensus        82 ~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~---~~~~~~~~r~lgi~L~l~gil~~  144 (150)
T COG3238          82 FVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGV---PKRPLNLPRILGILLVLAGILLA  144 (150)
T ss_pred             hhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCC---CcCCCCHHHHHHHHHHHHHHHHh
Confidence            22233344455555555444333333333322 11 2221   11334445999999999995555

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=94.68  E-value=0.47  Score=43.18  Aligned_cols=134  Identities=13%  Similarity=0.116  Sum_probs=90.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHH--HHHHHHHHHHHHHHHHhhcCCCcccccchhhHHH--HHHHHH
Q 017672          192 IKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTT--LQCFFSCIQSAFWAVAAERNPSAWKLGWDIHLVS--VVYCGL  267 (368)
Q Consensus       192 ~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~~gi  267 (368)
                      .....-++.-+++..+..+..|....+++-|.....  .|.+.+.+........---+.+.......+.|..  +++.+-
T Consensus        11 ~~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~   90 (314)
T KOG1444|consen   11 SSPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVGM   90 (314)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHHH
Confidence            344555555566666667778888887775455444  8888888777665533211122211112223333  333332


Q ss_pred             HhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhh
Q 017672          268 VINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVL  331 (368)
Q Consensus       268 ~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~  331 (368)
                            .+.-.+++++++....+++....|+++.+...+++|-+++...+.....+++|.....
T Consensus        91 ------i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~  148 (314)
T KOG1444|consen   91 ------LFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAA  148 (314)
T ss_pred             ------HHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhc
Confidence                  2233478999999999999999999999999999999999999999999999876654

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=94.00  E-value=0.023  Score=47.72  Aligned_cols=63  Identities=13%  Similarity=0.207  Sum_probs=57.5

Q ss_pred             HHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhhcccc
Q 017672          273 TYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWGKN  335 (368)
Q Consensus       273 ~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~~~~~  335 (368)
                      +.++|..++++++|+.++.+..-+-.+..+++|+++++++....++.+++.+.|+.+..+..+
T Consensus        66 aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN  128 (290)
T KOG4314|consen   66 ANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADN  128 (290)
T ss_pred             CCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccc
Confidence            456899999999999999999999999999999999999999999999999999888775443

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=93.86  E-value=0.31  Score=41.94  Aligned_cols=137  Identities=15%  Similarity=0.195  Sum_probs=100.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHhhhhccCC----CCCCHHHHHHHHHHHHHHH
Q 017672           16 PYIAMIFVQFAYAGMALFSKAAIAK-GMNPFVFVVYRQAFASLALSPFAFFLESQNA----SPLSYSSVCKIFLVSLFGL   90 (368)
Q Consensus        16 ~~~~~~l~~~~~~~~~~~~k~~~~~-g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~~   90 (368)
                      |++++....+.-+..-...|.-.+- ...-....++..+.+.++++.+.+..+.+..    ..++......+++.|++..
T Consensus       156 GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~sv  235 (309)
T COG5070         156 GYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSV  235 (309)
T ss_pred             ceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHh
Confidence            4455555544444444444443321 2456677899999999999988876554221    1233445567778888775


Q ss_pred             HHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhh
Q 017672           91 TLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFV  159 (368)
Q Consensus        91 ~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~  159 (368)
                      ..++ +--+.++-++.+..++...+.-.-.++.+.++++|+.++.      .+.++.+++..-++-...
T Consensus       236 giSy-~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~------si~sillGflsg~iYava  297 (309)
T COG5070         236 GISY-CSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFL------SIFSILLGFLSGAIYAVA  297 (309)
T ss_pred             hhhh-ccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHH------HHHHHHHHHHHHHHHHHH
Confidence            5555 8889999999999999999999999999999999999999      999999998887777653

>KOG4831 consensus Unnamed protein [Function unknown]

Probab=93.04  E-value=1.5  Score=32.92  Aligned_cols=111  Identities=14%  Similarity=0.219  Sum_probs=71.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCC------hHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHHH
Q 017672           19 AMIFVQFAYAGMALFSKAAIAKGMN------PFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTL   92 (368)
Q Consensus        19 ~~~l~~~~~~~~~~~~k~~~~~g~~------~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   92 (368)
                      -++...++||..+++.|..... ++      .....+.|-.....                .+++++..++    ++.+ 
T Consensus         7 ~lvaVgllWG~Tnplirrgs~g-~~~v~~~~~k~~~~lqe~~tl~----------------l~w~Y~iPFl----lNqc-   64 (125)
T KOG4831|consen    7 KLVAVGLLWGATNPLIRRGSLG-WDKVKSSSRKIMIALQEMKTLF----------------LNWEYLIPFL----LNQC-   64 (125)
T ss_pred             HHHHHHHHHccccHHHHHHHhh-HhhccCchHHHHHHHHHHHHHH----------------HhHHHHHHHH----HHHh-
Confidence            3566789999999999987642 22      23333333221110                0133333332    3333 


Q ss_pred             HHHHHHHhccccChhhhhhccc-chhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHh
Q 017672           93 SLNLYYVAINYTTATFAAATTN-TIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFA  157 (368)
Q Consensus        93 ~~~~~~~al~~~~~~~~~~i~~-~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~  157 (368)
                      ...+||.-+++++.+.+..+.+ +.-.|+.+.+..+ +|++..++     .++|..+.++|+.+.+
T Consensus        65 gSaly~~tLa~a~islavpv~nsltfafta~~G~~L-GE~~~g~~-----a~lGt~liv~Gi~Lci  124 (125)
T KOG4831|consen   65 GSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKAL-GEETQGGL-----ALLGTSLIVFGIWLCI  124 (125)
T ss_pred             hHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHh-ccccccce-----eehhhhHHhhhhhhee
Confidence            3458889999999999997665 7788888888875 55544441     7889999999987753

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=92.87  E-value=0.93  Score=41.89  Aligned_cols=146  Identities=13%  Similarity=-0.003  Sum_probs=89.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHh--hcCC-CcccccchhhHHHHHHHH
Q 017672          190 RWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAA--ERNP-SAWKLGWDIHLVSVVYCG  266 (368)
Q Consensus       190 ~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~l~~~g  266 (368)
                      +...|+++..+++++.+.+.+-.||. |+.+  ++.......+-.-+..|.....  -++. +.....+...+....+.|
T Consensus         4 ~ii~Gii~h~iGg~~~~sfy~P~kkv-k~Ws--WEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G   80 (344)
T PF06379_consen    4 AIILGIIFHAIGGFASGSFYVPFKKV-KGWS--WESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFG   80 (344)
T ss_pred             hHHHHHHHHHHHHHHhhhhccchhhc-CCcc--HHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHH
Confidence            45789999999999999999999884 5542  4444333333333333433222  1111 122223334555556666


Q ss_pred             HHhhhHHHHHHHHHHhccCccee-eecchhHHHHHHHHHHHHhcc-------cccchhHhHHHHHHHHHHHhhccccccc
Q 017672          267 LVINGITYWIQVWAIEKKGPVFI-AIFTPFALIITAIFSAFLWKE-------TLHWGSVGGAVLLVGGLYSVLWGKNREE  338 (368)
Q Consensus       267 i~~~~i~~~l~~~a~~~~~a~~~-~~~~~~~pv~~~i~~~~~~~e-------~~~~~~~~G~~lii~gi~~~~~~~~~~~  338 (368)
                      ++= .++-..|-.++|+++.+.. ++..-+..+++.++-.++.|+       +-....++|.++.++|+.+.-+....|+
T Consensus        81 ~lW-GIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke  159 (344)
T PF06379_consen   81 VLW-GIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMKE  159 (344)
T ss_pred             HHH-hcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhhh
Confidence            643 3666788899999987543 445555566666665555432       2244678999999999988876554443


Q ss_pred             h
Q 017672          339 R  339 (368)
Q Consensus       339 ~  339 (368)
                      +
T Consensus       160 ~  160 (344)
T PF06379_consen  160 K  160 (344)
T ss_pred             h
Confidence            3

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=92.59  E-value=1.8  Score=37.76  Aligned_cols=137  Identities=13%  Similarity=0.080  Sum_probs=95.7

Q ss_pred             hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHH----------hhhhccCCCCCCHH
Q 017672            9 AFTASQKPYIAMIFVQFAYAGMALFSKAAIAK-GMNPFVFVVYRQAFASLALSPFA----------FFLESQNASPLSYS   77 (368)
Q Consensus         9 ~~~~~~~~~~~~~l~~~~~~~~~~~~k~~~~~-g~~~~~~~~~r~~~~~l~l~~~~----------~~~~~~~~~~~~~~   77 (368)
                      +-.+-..|-++++++...-|.....--....+ --+.-.+.+.-.+-+.+.+-.-.          .+.+|  .    ..
T Consensus       166 e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~R--h----P~  239 (337)
T KOG1580|consen  166 EDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQR--H----PY  239 (337)
T ss_pred             cccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHh--c----cH
Confidence            33445578889999988888887776554432 12223333333333333322211          11222  1    24


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHh
Q 017672           78 SVCKIFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFA  157 (368)
Q Consensus        78 ~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~  157 (368)
                      .++.+.++++.+ ++.+.+.+.-..+-+|-..+++..+--.|+.+.+.++++.+++.+      ||+|..+.+.|...=.
T Consensus       240 ~~~~l~l~ai~s-~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~r------QwlgtvlVF~aL~~D~  312 (337)
T KOG1580|consen  240 VFWDLTLLAIAS-CLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGR------QWLGTVLVFSALTADV  312 (337)
T ss_pred             HHHHHHHHHHHH-HhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHH------HHHHHHHHHHHhhhHh
Confidence            466667777665 677778899999999999999999999999999999999999999      9999999999987755


Q ss_pred             h
Q 017672          158 F  158 (368)
Q Consensus       158 ~  158 (368)
                      .
T Consensus       313 ~  313 (337)
T KOG1580|consen  313 V  313 (337)
T ss_pred             h
Confidence            4

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=91.97  E-value=0.43  Score=42.50  Aligned_cols=143  Identities=20%  Similarity=0.161  Sum_probs=103.4

Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHhhhhc----cCCCCC-CHHHHHHHHHH
Q 017672           12 ASQKPYIAMIFVQFAYAGMALFSKAAIAK-GMNPFVFVVYRQAFASLALSPFAFFLES----QNASPL-SYSSVCKIFLV   85 (368)
Q Consensus        12 ~~~~~~~~~~l~~~~~~~~~~~~k~~~~~-g~~~~~~~~~r~~~~~l~l~~~~~~~~~----~~~~~~-~~~~~~~~~~~   85 (368)
                      -.+.|+++-+++.+.-+.+.+..|..... |=.-+.+.++..+.+.+.++|...+.+.    ...+++ .++-|..+.+.
T Consensus       182 ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLs  261 (347)
T KOG1442|consen  182 LSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLS  261 (347)
T ss_pred             cchhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHH
Confidence            35789999999999999999999965543 3346788899999999999998876432    222232 45667777777


Q ss_pred             HHHHHHHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcC
Q 017672           86 SLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKG  161 (368)
Q Consensus        86 g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~  161 (368)
                      |++++..++. -.+=++.++|-.--+-.......=.+++..+++|..+..      .|.+-++.+.|-..-.+.++
T Consensus       262 glfgF~mgyv-Tg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~l------wwtsn~~vLvgs~~YT~vk~  330 (347)
T KOG1442|consen  262 GLFGFAMGYV-TGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGL------WWTSNIVVLVGSLAYTLVKE  330 (347)
T ss_pred             HHHHHHhhhe-eeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhh------eeeeeEEEEehhHHHHHHHH
Confidence            7777666652 223345566554444344445555688899999999999      99999999999988876544

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=90.11  E-value=2.7  Score=38.22  Aligned_cols=122  Identities=15%  Similarity=0.221  Sum_probs=84.3

Q ss_pred             HHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCCCcc--cccchhhHHHHHHHHHHhhhHHHHHHHHHHhccCccee
Q 017672          212 QGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAW--KLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFI  289 (368)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~  289 (368)
                      .++..++++-|+..+.....+-...........+...+..  +..+....-.+.-.|+ +++.=..+-++++++++.+..
T Consensus        35 ~~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtal-ata~DIGLSN~sl~yVtlSlY  113 (349)
T KOG1443|consen   35 FKWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTAL-ATALDIGLSNWSLEYVTLSLY  113 (349)
T ss_pred             hhhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhh-hhhcccccccceeeeeeeeee
Confidence            3444455665677777777776666655554444432221  1111111212223333 566667788999999999999


Q ss_pred             eecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhhccc
Q 017672          290 AIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWGK  334 (368)
Q Consensus       290 ~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~~~~  334 (368)
                      ++.-+..+++..+++.++-=|+++|....=..+|-+|+++..+..
T Consensus       114 TM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~Ks  158 (349)
T KOG1443|consen  114 TMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKS  158 (349)
T ss_pred             eeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecc
Confidence            999999999999999998889999999998889989988877643

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=86.98  E-value=6.7  Score=35.25  Aligned_cols=141  Identities=13%  Similarity=0.100  Sum_probs=92.2

Q ss_pred             hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHh--hhhc----cC----CCCC--
Q 017672            8 NAFTASQKPYIAMIFVQFAYAGMALFSKAAIAK-GMNPFVFVVYRQAFASLALSPFAF--FLES----QN----ASPL--   74 (368)
Q Consensus         8 ~~~~~~~~~~~~~~l~~~~~~~~~~~~k~~~~~-g~~~~~~~~~r~~~~~l~l~~~~~--~~~~----~~----~~~~--   74 (368)
                      .++.....|+.++.++.+.-+.+.+......+. |-++-+..++.-+...+.++...-  ..+.    ..    .|..  
T Consensus       157 ~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~  236 (330)
T KOG1583|consen  157 SDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGF  236 (330)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCc
Confidence            345567789999999999999888888877654 899999999999988887776421  0000    00    0110  


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHhccc----cChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhH
Q 017672           75 SYSSVCKIFLVSLFGLTLSLNLYYVAINY----TTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSV  150 (368)
Q Consensus        75 ~~~~~~~~~~~g~~~~~~~~~~~~~al~~----~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~  150 (368)
                      .-...+.+++..    ++.+..=..+...    +++-+.++...+-=.+..+++.+.++.++++.      .|+|..+.+
T Consensus       237 ~vP~~~~yLl~n----~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~------h~lGa~lVF  306 (330)
T KOG1583|consen  237 KVPSMWVYLLFN----VLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPW------HWLGAALVF  306 (330)
T ss_pred             cccHHHHHHHHH----HHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHH------HHHHHHHHH
Confidence            011112222211    2222111122222    33445556667777888899999999999999      999999999


Q ss_pred             HhHHHHhh
Q 017672          151 SGALVFAF  158 (368)
Q Consensus       151 ~Gv~li~~  158 (368)
                      .|.++...
T Consensus       307 ~Gt~~fa~  314 (330)
T KOG1583|consen  307 FGTLLFAN  314 (330)
T ss_pred             HHHHHHHH
Confidence            99999875

>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine

Probab=85.70  E-value=1.5  Score=39.77  Aligned_cols=130  Identities=10%  Similarity=0.010  Sum_probs=74.1

Q ss_pred             HHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCCC-----------cccccchhhHHHHHHHHH
Q 017672          199 ISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPS-----------AWKLGWDIHLVSVVYCGL  267 (368)
Q Consensus       199 l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~l~~~gi  267 (368)
                      +++.+||+-.-..+|-..++... .+..++=..++.++..++..+.-+...           +....+...+.. .+.|.
T Consensus         2 ~itmlcwGSW~nt~kL~~r~gR~-~qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~-A~aGG   79 (336)
T PF07168_consen    2 VITMLCWGSWPNTQKLAERRGRL-PQHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLF-AMAGG   79 (336)
T ss_pred             eeehhhhcChHHHHHHHHhcCCc-cceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHH-HHHhh
Confidence            46778888888888877654332 223444455555554444433322111           111112222333 33443


Q ss_pred             HhhhHHHHHHHHHHhccCcceeeecc-hhHHHHHHHHHHHHhccccc--chhHhHHHHHHHHHHHhh
Q 017672          268 VINGITYWIQVWAIEKKGPVFIAIFT-PFALIITAIFSAFLWKETLH--WGSVGGAVLLVGGLYSVL  331 (368)
Q Consensus       268 ~~~~i~~~l~~~a~~~~~a~~~~~~~-~~~pv~~~i~~~~~~~e~~~--~~~~~G~~lii~gi~~~~  331 (368)
                      +.--++.++..+++...+.+++-++. .+..++++++.++ ++.+.+  ...+.|.+++++++++-.
T Consensus        80 vvfnlgNillq~aia~aGmSVafpvg~glalVlGv~~NYf-ld~~~n~a~iLF~GV~cf~iAI~lga  145 (336)
T PF07168_consen   80 VVFNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYF-LDPKINRAEILFPGVACFLIAIILGA  145 (336)
T ss_pred             HhhhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeee-ccCCCCCceEEEccHHHHHHHHHHHH
Confidence            34448889999999998887776644 3334445555554 344443  356779999988887754

Transport is dependent on glucose and a proton gradient [].

>PRK02237 hypothetical protein; Provisional

Probab=83.64  E-value=3.9  Score=31.04  Aligned_cols=46  Identities=9%  Similarity=0.032  Sum_probs=38.6

Q ss_pred             eecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhhcccc
Q 017672          290 AIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWGKN  335 (368)
Q Consensus       290 ~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~~~~~  335 (368)
                      +...-...+.+++++|.+=|++|+...++|.++.++|+.+..+..+
T Consensus        63 AAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~pR  108 (109)
T PRK02237         63 AAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAPR  108 (109)
T ss_pred             HHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecCC
Confidence            4456677788999999999999999999999999999877765443

>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins

Probab=81.84  E-value=64  Score=32.88  Aligned_cols=22  Identities=18%  Similarity=0.036  Sum_probs=12.7

Q ss_pred             cccccchhhHHHhHHhHHHHhh
Q 017672          137 LHGIAKVLGSVVSVSGALVFAF  158 (368)
Q Consensus       137 ~~~~~~~~gi~l~~~Gv~li~~  158 (368)
                      |.++.-+++..+..++..++..
T Consensus       378 ~~Kw~li~~~~~~ta~~Gama~  399 (599)
T PF06609_consen  378 HIKWQLIFGSVLMTAFCGAMAA  399 (599)
T ss_pred             chhHHHHHHHHHHHHHHHHHHH
Confidence            3444456777776666555543

Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=81.66  E-value=1.7  Score=38.96  Aligned_cols=64  Identities=13%  Similarity=0.083  Sum_probs=57.1

Q ss_pred             hhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhhc
Q 017672          269 INGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLW  332 (368)
Q Consensus       269 ~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~~  332 (368)
                      +-..+-.+++.++..++++..-++.-...+++.+++..+++.+++..+|+|+..+..|+..+-.
T Consensus        95 ~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~  158 (372)
T KOG3912|consen   95 CDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGS  158 (372)
T ss_pred             HHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeee
Confidence            5556678899999999999999999999999999999999999999999999999999877643

>PRK06638 NADH:ubiquinone oxidoreductase subunit J; Provisional

Probab=81.11  E-value=35  Score=29.33  Aligned_cols=32  Identities=19%  Similarity=0.223  Sum_probs=22.5

Q ss_pred             HHHHHHHhcccccchhHhHHHHHHH--HHHHhhc
Q 017672          301 AIFSAFLWKETLHWGSVGGAVLLVG--GLYSVLW  332 (368)
Q Consensus       301 ~i~~~~~~~e~~~~~~~~G~~lii~--gi~~~~~  332 (368)
                      -.+|..++++..-+.+..|..+.++  |.+...+
T Consensus       133 ~~iG~~L~t~y~l~fe~~silLLvAmIGAI~La~  166 (198)
T PRK06638        133 KAIGILLFTDYLLPFELASVLLLVAMVGAIVLAR  166 (198)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            4457788888888888888888763  4444443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	368
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	99.1
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.61
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.59
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.58

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=99.10  E-value=7.4e-11  Score=93.70  Aligned_cols=71  Identities=8%  Similarity=0.192  Sum_probs=54.4

Q ss_pred             HHHHHhhhHHHHHHHHHHhccCcceeeec-chhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhhccc
Q 017672          264 YCGLVINGITYWIQVWAIEKKGPVFIAIF-TPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWGK  334 (368)
Q Consensus       264 ~~gi~~~~i~~~l~~~a~~~~~a~~~~~~-~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~~~~  334 (368)
                      .+++++++++++++.+++++.+++++..+ ..+.|+++.+++++++||++++.+++|+++|++|+++....+
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            45667888999999999999999999998 899999999999999999999999999999999999987644

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.61  E-value=3.1e-07  Score=70.20  Aligned_cols=69  Identities=13%  Similarity=0.185  Sum_probs=63.3

Q ss_pred             HHHHHHHHHHHHHHHHhccccChhhhhhc-ccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhh
Q 017672           84 LVSLFGLTLSLNLYYVAINYTTATFAAAT-TNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAF  158 (368)
Q Consensus        84 ~~g~~~~~~~~~~~~~al~~~~~~~~~~i-~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~  158 (368)
                      +.++++...++.++..++++.|.+.+..+ ..+.|+++.+++++++||+++..      +++|+.++++|++++..
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~------~~~Gi~lIi~Gv~~l~~  103 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLP------AIIGMMLICAGVLIINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHhc
Confidence            45666677888899999999999999988 79999999999999999999999      99999999999999865

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.59  E-value=1.1e-07  Score=72.82  Aligned_cols=70  Identities=9%  Similarity=0.195  Sum_probs=63.8

Q ss_pred             HHHHHhhhHHHHHHHHHHhccCcceeeec-chhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhhcc
Q 017672          264 YCGLVINGITYWIQVWAIEKKGPVFIAIF-TPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWG  333 (368)
Q Consensus       264 ~~gi~~~~i~~~l~~~a~~~~~a~~~~~~-~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~~~  333 (368)
                      ..++++.++++.++.+++|+.+.+.+..+ ..+.|+++.+++++++||++++.+++|.++|+.|+++....
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~  104 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            35566778999999999999999999888 89999999999999999999999999999999999987653

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.58  E-value=9.6e-08  Score=75.73  Aligned_cols=69  Identities=13%  Similarity=0.185  Sum_probs=53.3

Q ss_pred             HHHHHHHHHHHHHHHHhccccChhhhhhc-ccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhh
Q 017672           84 LVSLFGLTLSLNLYYVAINYTTATFAAAT-TNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAF  158 (368)
Q Consensus        84 ~~g~~~~~~~~~~~~~al~~~~~~~~~~i-~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~  158 (368)
                      +++++...+++.++..++++.|++.+..+ .++.|+++.++++++++|++++.      +++|+.++++|++++..
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~------~~~Gi~LIi~GV~ll~~  103 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLP------AIIGMMLICAGVLIINL  103 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------------CHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHhc
Confidence            46667778889999999999999999998 89999999999999999999999      99999999999999975

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00