Citrus Sinensis ID: 017747
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 366 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SPV4 | 359 | Salicylate O-methyltransf | N/A | no | 0.950 | 0.969 | 0.425 | 5e-79 | |
| Q68CM3 | 365 | Probable caffeine synthas | N/A | no | 0.961 | 0.964 | 0.401 | 4e-69 | |
| Q9SBK6 | 392 | Jasmonate O-methyltransfe | N/A | no | 0.939 | 0.877 | 0.418 | 2e-68 | |
| Q9FZN8 | 369 | Caffeine synthase 1 OS=Ca | N/A | no | 0.956 | 0.948 | 0.399 | 5e-67 | |
| Q9AR07 | 389 | Jasmonate O-methyltransfe | no | no | 0.939 | 0.884 | 0.427 | 5e-67 | |
| Q8H0D2 | 384 | 3,7-dimethylxanthine N-me | N/A | no | 0.898 | 0.856 | 0.420 | 6e-65 | |
| Q8H0G0 | 384 | Theobromine synthase 2 OS | N/A | no | 0.893 | 0.851 | 0.404 | 2e-63 | |
| Q9AVK0 | 372 | 7-methylxanthosine syntha | N/A | no | 0.909 | 0.895 | 0.407 | 3e-63 | |
| A4GE70 | 384 | 3,7-dimethylxanthine N-me | N/A | no | 0.898 | 0.856 | 0.408 | 5e-63 | |
| A4GE69 | 372 | 7-methylxanthosine syntha | N/A | no | 0.909 | 0.895 | 0.405 | 1e-62 |
| >sp|Q9SPV4|SAMT_CLABR Salicylate O-methyltransferase OS=Clarkia breweri GN=SAMT PE=1 SV=1 | Back alignment and function desciption |
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Score = 295 bits (754), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 159/374 (42%), Positives = 230/374 (61%), Gaps = 26/374 (6%)
Query: 1 MDVEKLFHMAGGTGPTSYARNSSLQKKASDTVKHITLEALQQLYLEIDPKT-INIADLGC 59
MDV ++ HM GG G SYA NS +Q++ K IT A+ LY T + IADLGC
Sbjct: 1 MDVRQVLHMKGGAGENSYAMNSFIQRQVISITKPITEAAITALYSGDTVTTRLAIADLGC 60
Query: 60 SSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRN 119
SSGPN L + + ++TVE +++ + +PE+ +LNDLP NDFN++F++LP + N
Sbjct: 61 SSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLP-----IEN 115
Query: 120 ERGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGN 179
+ G +I G PGSFYGRLFP N+LHFIHSS SL WLS+VP +G NKGN
Sbjct: 116 DVDG----VCFINGVPGSFYGRLFPRNTLHFIHSSYSLMWLSQVP------IGIESNKGN 165
Query: 180 IYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFF 239
IY++ + P +V AY+KQFQED LFLR R++E+V GGRMVL +LGR D
Sbjct: 166 IYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILGRRSEDRASTECCLI 225
Query: 240 WELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLDMFQV--- 296
W+LL+ +L +VS+G IE+EK+ ++ Y PS E+E E+ +EGSF +D ++ ++
Sbjct: 226 WQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIEASEIYWS 285
Query: 297 ----ERQGHDRGESYGSAVARTVRAIQESTIIHHFGIGEGVLDNLFEIYGRLVDEEMAKE 352
+ G E G VAR +RA+ E ++ HF GE +++++F Y L+ E M+KE
Sbjct: 286 SCTKDGDGGGSVEEEGYNVARCMRAVAEPLLLDHF--GEAIIEDVFHRYKLLIIERMSKE 343
Query: 353 EIKPLTFVL-LLRK 365
+ K + ++ L+RK
Sbjct: 344 KTKFINVIVSLIRK 357
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Catalyzes the methylation of the free carboxyl end of the plant hormone salicylic acid (SA). Converts SA to SA methyl ester (MSA). The volatile compound MSA is hypothesized to act as an airborne signal that triggers defense responses in uninfected plants. MSA is an important chemoattractant for moth pollinated flowering plants. Clarkia breweri (taxid: 36903) EC: 2EC: .EC: 1EC: .EC: 1EC: .EC: nEC: 9 |
| >sp|Q68CM3|TCS2_CAMSI Probable caffeine synthase 2 OS=Camellia sinensis GN=TCS2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 261 bits (668), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 150/374 (40%), Positives = 221/374 (59%), Gaps = 22/374 (5%)
Query: 2 DVEKLFHMAGGTGPTSYARNSSLQKKASDTVKHITLEALQQLYLEID---PKTINIADLG 58
+V++ M G G +SYA+NSS + + + A++ L+ + D + +N DLG
Sbjct: 3 EVKEALFMNKGEGESSYAQNSSFTQTVTSMTMPVLENAVETLFSK-DFHLLQALNAVDLG 61
Query: 59 CSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLR 118
C++GP T +I + +E RE L E YLNDLP NDFN++FK LP + +
Sbjct: 62 CAAGPTTFTVISTIKRMMEKKCRE-LNCQTLELQVYLNDLPGNDFNTLFKGLPS--KVVG 118
Query: 119 NERGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKG 178
N+ S Y+ G PGSF+GRLFP NSLH +HS S+HWL++ P L ++ G ++NKG
Sbjct: 119 NK---CEEVSCYVVGVPGSFHGRLFPRNSLHLVHSCYSVHWLTQAPKGLTSKEGLALNKG 175
Query: 179 NIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSF 238
IYIS++SP V +AY QF EDFT+FL SRS+E+V G MVLIL GR+ D D G+ F
Sbjct: 176 KIYISKTSPPVVREAYLSQFHEDFTMFLNSRSQEVVPNGCMVLILRGRLSSDPSDMGSCF 235
Query: 239 FWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLDMFQV-- 296
WELL+ ++A LVSQG I+++KL ++ Y PS EE++ V R GSF +D ++ F++
Sbjct: 236 TWELLAVAIAELVSQGLIDEDKLDTFNVPSYFPSLEEVKDIVERNGSFTIDHMEGFELDS 295
Query: 297 -ERQGHD---RGESYGSAVARTVRAIQESTIIHHFGIGEGVLDNLFEIYGRLVDEEMAKE 352
E Q +D RGE + A RA E I + F G ++D L+E + +V + +
Sbjct: 296 PEMQENDKWVRGEKF----ATVARAFTEPIISNQF--GHEIMDKLYEKFTHIVVSDFEAK 349
Query: 353 EIKPLTFVLLLRKL 366
K + +L+L K+
Sbjct: 350 IPKITSIILVLSKI 363
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May be involved in the biosynthesis of caffeine. Catalyzes the conversion of 7-methylxanthine (7mX) to theobromine and of theobromine to caffeine. Has 1-N-methylation activity. Camellia sinensis (taxid: 4442) EC: 2 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 6 EC: 0 |
| >sp|Q9SBK6|JMT_BRARP Jasmonate O-methyltransferase OS=Brassica rapa subsp. pekinensis GN=JMT PE=1 SV=1 | Back alignment and function description |
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Score = 259 bits (663), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 157/375 (41%), Positives = 227/375 (60%), Gaps = 31/375 (8%)
Query: 1 MDVEKLFHMAGGTGPTSYARNSSLQKKASDTVKHITLEALQQLYLE-IDPKTINIADLGC 59
M+V ++ HM G G TSYA+NS +Q + + EAL++L + + + IADLGC
Sbjct: 1 MEVMRILHMNKGNGETSYAKNSIVQSNIISLGRRVMDEALKKLMIRNSEILSFGIADLGC 60
Query: 60 SSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRN 119
SSGPN+L I + V+T++ + L P PE LNDLP+NDFN +F +LP+F+ +++
Sbjct: 61 SSGPNSLLSISNIVETIQNLCHD-LDRPVPELSLSLNDLPSNDFNYIFASLPEFYDRVKK 119
Query: 120 ERGG--------GSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEM 171
GS +++ PGSFYGRLFP SLHF+HSS+SLHWLS+VP N+
Sbjct: 120 RDNNYESLGFEHGSGGPCFVSAVPGSFYGRLFPRRSLHFVHSSSSLHWLSQVPCGEVNKK 179
Query: 172 GESI------NKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLG 225
+ N+G IY+S++SP + K Y QFQ DF++FLRSRSEELV GGRMVL LG
Sbjct: 180 DGVVITADLDNRGKIYLSKTSPKSAHKVYALQFQTDFSVFLRSRSEELVPGGRMVLSFLG 239
Query: 226 RIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGS 285
R PD + + WELL+++L L +G IE+E + A++A +YA S EE++ + +EGS
Sbjct: 240 RSSPDPTTEESCYQWELLAQALMSLAKEGIIEEENIDAFNAPYYAASPEELKMAIEKEGS 299
Query: 286 FKLDQLDMFQVERQGHD-RGESY------------GSAVARTVRAIQESTIIHHFGIGEG 332
F +D+L++ V+ +G +SY G VA+T+RA+ E + F G+
Sbjct: 300 FSIDRLEISPVDWEGGSISDDSYDIVRFKPEALASGRRVAKTIRAVVEPMLEPTF--GQK 357
Query: 333 VLDNLFEIYGRLVDE 347
V+D LFE Y +LV E
Sbjct: 358 VMDELFERYAKLVGE 372
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Catalyzes the methylation of jasmonate into methyljasmonate, a plant volatile that acts as an important cellular regulator mediating diverse developmental processes and defense responses. Brassica rapa subsp. pekinensis (taxid: 51351) EC: 2 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 4 EC: 1 |
| >sp|Q9FZN8|TCS1_CAMSI Caffeine synthase 1 OS=Camellia sinensis GN=TCS1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 255 bits (651), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 149/373 (39%), Positives = 219/373 (58%), Gaps = 23/373 (6%)
Query: 3 VEKLFHMAGGTGPTSYARNSSLQKKASDTVKHITLEALQQLY-LEIDPKTINIADLGCSS 61
V ++ M G G +SYA+NSS ++ + + A++ L+ + + +N ADLGC++
Sbjct: 9 VNEVLFMNRGEGESSYAQNSSFTQQVASMAQPALENAVETLFSRDFHLQALNAADLGCAA 68
Query: 62 GPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNER 121
GPNT A+I + +E RE L E YLNDL NDFN++FK L +E
Sbjct: 69 GPNTFAVISTIKRMMEKKCRE-LNCQTLELQVYLNDLFGNDFNTLFKGL-------SSEV 120
Query: 122 GGGSSPSV--YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGN 179
G V Y+ G PGSF+GRLFP NSLH +HSS S+HWL++ P L + G ++NKG
Sbjct: 121 IGNKCEEVPCYVMGVPGSFHGRLFPRNSLHLVHSSYSVHWLTQAPKGLTSREGLALNKGK 180
Query: 180 IYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFF 239
IYIS++SP V +AY QF EDFT+FL +RS+E+V G MVLIL GR D D + F
Sbjct: 181 IYISKTSPPVVREAYLSQFHEDFTMFLNARSQEVVPNGCMVLILRGRQCSDPSDMQSCFT 240
Query: 240 WELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQL---DMFQV 296
WELL+ ++A LVSQG I+++KL ++ Y S EE++ V R+GSF +D + D+ V
Sbjct: 241 WELLAMAIAELVSQGLIDEDKLDTFNIPSYFASLEEVKDIVERDGSFTIDHIEGFDLDSV 300
Query: 297 ERQGHD---RGESYGSAVARTVRAIQESTIIHHFGIGEGVLDNLFEIYGRLVDEEMAKEE 353
E Q +D RGE + + VRA E I + F G ++D L++ + +V ++ +
Sbjct: 301 EMQENDKWVRGEKF----TKVVRAFTEPIISNQF--GPEIMDKLYDKFTHIVVSDLEAKL 354
Query: 354 IKPLTFVLLLRKL 366
K + +L+L K+
Sbjct: 355 PKTTSIILVLSKI 367
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Involved in the biosynthesis of caffeine. Catalyzes the conversion of 7-methylxanthine (7mX) to theobromine and of theobromine to caffeine. Has 3-N- and 1-N-methylation activity. Camellia sinensis (taxid: 4442) EC: 2 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 6 EC: 0 |
| >sp|Q9AR07|JMT_ARATH Jasmonate O-methyltransferase OS=Arabidopsis thaliana GN=JMT PE=1 SV=3 | Back alignment and function description |
|---|
Score = 255 bits (651), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 159/372 (42%), Positives = 225/372 (60%), Gaps = 28/372 (7%)
Query: 1 MDVEKLFHMAGGTGPTSYARNSSLQKKASDTVKHITLEALQQLYLE-IDPKTINIADLGC 59
M+V ++ HM G G TSYA+NS+ Q + + EAL++L + + +I IADLGC
Sbjct: 1 MEVMRVLHMNKGNGETSYAKNSTAQSNIISLGRRVMDEALKKLMMSNSEISSIGIADLGC 60
Query: 60 SSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRN 119
SSGPN+L I + V T+ + L P PE LNDLP+NDFN + +LP+F+ ++ N
Sbjct: 61 SSGPNSLLSISNIVDTIHNLCPD-LDRPVPELRVSLNDLPSNDFNYICASLPEFYDRVNN 119
Query: 120 ER-----GGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGES 174
+ G G S +++ PGSFYGRLFP SLHF+HSS+SLHWLS+VP + +
Sbjct: 120 NKEGLGFGRGGGESCFVSAVPGSFYGRLFPRRSLHFVHSSSSLHWLSQVPCREAEKEDRT 179
Query: 175 I-----NKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGP 229
I N G IYIS++SP + KAY QFQ DF +FLRSRSEELV GGRMVL LGR
Sbjct: 180 ITADLENMGKIYISKTSPKSAHKAYALQFQTDFWVFLRSRSEELVPGGRMVLSFLGRRSL 239
Query: 230 DHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLD 289
D + + WELL+++L + +G IE+EK+ A++A +YA S EE++ + +EGSF +D
Sbjct: 240 DPTTEESCYQWELLAQALMSMAKEGIIEEEKIDAFNAPYYAASSEELKMVIEKEGSFSID 299
Query: 290 QLDMFQVERQGHD-RGESY-------------GSAVARTVRAIQESTIIHHFGIGEGVLD 335
+L++ ++ +G ESY G V+ T+RA+ E + F GE V+D
Sbjct: 300 RLEISPIDWEGGSISEESYDLVIRSKPEALASGRRVSNTIRAVVEPMLEPTF--GENVMD 357
Query: 336 NLFEIYGRLVDE 347
LFE Y ++V E
Sbjct: 358 ELFERYAKIVGE 369
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Catalyzes the methylation of jasmonate into methyljasmonate, a plant volatile that acts as an important cellular regulator mediating diverse developmental processes and defense responses. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 4 EC: 1 |
| >sp|Q8H0D2|DXMT1_COFAR 3,7-dimethylxanthine N-methyltransferase OS=Coffea arabica GN=DXMT1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 248 bits (633), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 150/357 (42%), Positives = 205/357 (57%), Gaps = 28/357 (7%)
Query: 1 MDVEKLFHMAGGTGPTSYARNSSLQKKASDTVKHITLEALQQLYLEIDP---KTINIADL 57
M+++++ HM GG G TSYA+NS VK I + +Q+L P K I +ADL
Sbjct: 1 MELQEVLHMNGGEGDTSYAKNS-FYNLFLIRVKPILEQCIQELLRANLPNINKCIKVADL 59
Query: 58 GCSSGPNTLAIIKDFVQTVEMTSREILQN-PAPEFHFYLNDLPTNDFNSVFKALPDFHRQ 116
GC+SGPNTL ++D VQ+++ +E P +LNDL NDFNSVFK+LP F+R+
Sbjct: 60 GCASGPNTLLTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKSLPSFYRK 119
Query: 117 LRNERGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESIN 176
L E G S I PGSFYGRLFP S+HF+HS LHWLS+VP L E+G S N
Sbjct: 120 LEKENGCKIG-SCLIGAMPGSFYGRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISAN 178
Query: 177 KGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGN 236
KG IY S++S + KAY QF +DFT FLR SEEL+ GRM+L + + D + N
Sbjct: 179 KGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHSEELISRGRMLLTWICK--EDEFENPN 236
Query: 237 SFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLDMFQV 296
S +LL S+ LV +G +E+EKL +++ YAPS EE++ V EGSF++ L+ F+V
Sbjct: 237 SI--DLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKCIVEEEGSFEILYLETFKV 294
Query: 297 ----------ERQGHDRG------ESYGSAVARTVRAIQESTIIHHFGIGEGVLDNL 337
+ QG + + VA VR+I E + HF GE +L +L
Sbjct: 295 PYDAGFSIDDDYQGRSHSPVSCDEHARAAHVASVVRSIFEPIVASHF--GEAILPDL 349
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Involved in the biosynthesis of caffeine. Catalyzes the conversion of paraxanthine to caffeine. Can also convert 7-methylxanthine to theobromine and theobromine to caffeine, but no sequential conversion of 7-methylxanthine to caffeine was detected. Coffea arabica (taxid: 13443) EC: 2 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 6 EC: 0 |
| >sp|Q8H0G0|CTS2_COFAR Theobromine synthase 2 OS=Coffea arabica GN=CTS2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 243 bits (619), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 146/361 (40%), Positives = 206/361 (57%), Gaps = 34/361 (9%)
Query: 1 MDVEKLFHMAGGTGPTSYARNSSLQKKASDTVKHITLEALQQLYLEIDPK---TINIADL 57
M+++ + HM GG G TSYA+NSS A VK + + +++L P I +ADL
Sbjct: 1 MELQAVLHMNGGEGDTSYAKNSSYNL-ALAKVKPVLEQCIRELLRANLPNINNCIKVADL 59
Query: 58 GCSSGPNTLAIIKDFVQTVEMTSREILQN-PAPEFHFYLNDLPTNDFNSVFKALPDFHRQ 116
GC+SGPNTL ++D VQ+++ +E P +LNDL NDFNSVFK LP F+R+
Sbjct: 60 GCASGPNTLLTVRDIVQSIDKVGQEEKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRK 119
Query: 117 LRNERGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESIN 176
L E G S I+ PGSFYGRLFP S+HFIHS S HWLS+VP L E+G S N
Sbjct: 120 LEKENGRKIG-SCLISAMPGSFYGRLFPEESMHFIHSCYSFHWLSQVPSGLVIELGISAN 178
Query: 177 KGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGN 236
KG+IY S++S V KAY QF +DFT FLR S+EL GRM+L + ++ D D N
Sbjct: 179 KGSIYSSKASRPPVQKAYLDQFTKDFTTFLRIHSKELFSRGRMLLTCICKV--DEYDEPN 236
Query: 237 SFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLDMFQV 296
+LL ++ L+ +G +E+EKL +++ F+ PS EE++ V EGSF++ L+ F+
Sbjct: 237 PL--DLLDMAINDLIVEGHLEEEKLASFNLPFFTPSAEEVKCIVEEEGSFEILYLETFKA 294
Query: 297 ERQGHDRG-------------ESYGSA------VARTVRAIQESTIIHHFGIGEGVLDNL 337
+D G + YG VA +R++ E + HF GE ++ +L
Sbjct: 295 H---YDAGFSIDDDYPVRSHFQVYGDEHIKAEYVASLIRSVYEPILASHF--GEAIMPDL 349
Query: 338 F 338
F
Sbjct: 350 F 350
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Involved in the biosynthesis of caffeine. Catalyzes the conversion of 7-methylxanthine (7mX) to theobromine. Does not have 1-N-methylation activity. Coffea arabica (taxid: 13443) EC: 2 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 5 EC: 9 |
| >sp|Q9AVK0|XMT1_COFAR 7-methylxanthosine synthase 1 OS=Coffea arabica GN=XMT1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 242 bits (617), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 144/353 (40%), Positives = 207/353 (58%), Gaps = 20/353 (5%)
Query: 1 MDVEKLFHMAGGTGPTSYARNSSLQKKASDTVKHITLEALQQLYLEIDP---KTINIADL 57
M+++++ M GG G TSYA+NS+ + VK + + +++L P K I +ADL
Sbjct: 1 MELQEVLRMNGGEGDTSYAKNSAYNQLVLAKVKPVLEQCVRELLRANLPNINKCIKVADL 60
Query: 58 GCSSGPNTLAIIKDFVQTVEMTSREILQN-PAPEFHFYLNDLPTNDFNSVFKALPDFHRQ 116
GC+SGPNTL ++D VQ+++ +E P +LNDL NDFNSVFK LP F+R+
Sbjct: 61 GCASGPNTLLTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFPNDFNSVFKLLPSFYRK 120
Query: 117 LRNERGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESIN 176
L E G S I PGSFY RLFP S+HF+HS L WLS+VP L E+G S N
Sbjct: 121 LEKENGRKIG-SCLIGAMPGSFYSRLFPEESMHFLHSCYCLQWLSQVPSGLVTELGISTN 179
Query: 177 KGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGN 236
KG+IY S++S V KAY QF +DFT FLR SEEL GRM+L + + G + +D N
Sbjct: 180 KGSIYSSKASRLPVQKAYLDQFTKDFTTFLRIHSEELFSHGRMLLTCICK-GVE-LDARN 237
Query: 237 SFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLDMFQV 296
+ +LL ++ LV +G +E+EKL +++ Y PS EE++ V EGSF++ L+ F+V
Sbjct: 238 AI--DLLEMAINDLVVEGHLEEEKLDSFNLPVYIPSAEEVKCIVEEEGSFEILYLETFKV 295
Query: 297 ERQGHDRGESY------GSAVARTVRAIQESTIIHHFGIGEGVLDNLFEIYGR 343
+D G S VA +VRA+ E + HF GE ++ ++F + +
Sbjct: 296 L---YDAGFSIDDEHIKAEYVASSVRAVYEPILASHF--GEAIIPDIFHRFAK 343
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Involved in the biosynthesis of caffeine. Specific for xanthosine and could not use xanthosine 5'-monophosphate (XMP) as substrate. Catalyzes the 7-N-methylation activity of xanthosine, but does not have 1-N- or 3-N-methylation activity. Coffea arabica (taxid: 13443) EC: 2 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 5 EC: 8 |
| >sp|A4GE70|DXMT1_COFCA 3,7-dimethylxanthine N-methyltransferase OS=Coffea canephora GN=DXMT1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 241 bits (616), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 146/357 (40%), Positives = 200/357 (56%), Gaps = 28/357 (7%)
Query: 1 MDVEKLFHMAGGTGPTSYARNSSLQKKASDTVKHITLEALQQLYLEIDP---KTINIADL 57
M+++++ HM GG G TSYA+NSS VK + + +Q+L P K + DL
Sbjct: 1 MELQEVLHMNGGEGDTSYAKNSSYNLFLI-RVKPVLEQCIQELLRANLPNINKCFKVGDL 59
Query: 58 GCSSGPNTLAIIKDFVQTVEMTSREILQN-PAPEFHFYLNDLPTNDFNSVFKALPDFHRQ 116
GC+SGPNT + ++D VQ+++ +E P +LNDL NDFNSVFK LP F+R
Sbjct: 60 GCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRN 119
Query: 117 LRNERGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESIN 176
L E G S I PGSFY RLFP S+HF+HS LHWLS+VP L E+G S+N
Sbjct: 120 LEKENGRKIG-SCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVN 178
Query: 177 KGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGN 236
KG IY S++S + KAY QF +DFT FLR SEEL+ GRM+L + + D D N
Sbjct: 179 KGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHSEELISRGRMLLTFICK--EDEFDHPN 236
Query: 237 SFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLDMFQV 296
S +LL S+ LV +G +E+EKL +++ YAPS EE++ V EGSF++ L+ F
Sbjct: 237 SM--DLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEILYLETFNA 294
Query: 297 ----------ERQGHDRG------ESYGSAVARTVRAIQESTIIHHFGIGEGVLDNL 337
+ QG + + VA VR+I E + HF GE +L +L
Sbjct: 295 PYDAGFSIDDDYQGRSHSPVSCDEHARAAHVASVVRSIYEPILASHF--GEAILPDL 349
|
Involved in the biosynthesis of caffeine. Catalyzes the conversion of 7-methylxanthine to theobromine and of theobromine to caffeine, but no sequential conversion of 7-methylxanthine to caffeine was detected. Coffea canephora (taxid: 49390) EC: 2 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 6 EC: 0 |
| >sp|A4GE69|XMT1_COFCA 7-methylxanthosine synthase 1 OS=Coffea canephora GN=XMT1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 240 bits (612), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 143/353 (40%), Positives = 206/353 (58%), Gaps = 20/353 (5%)
Query: 1 MDVEKLFHMAGGTGPTSYARNSSLQKKASDTVKHITLEALQQLYLEIDP---KTINIADL 57
M+++++ M GG G TSYA+NS+ + VK + + +++L P K I +ADL
Sbjct: 1 MELQEVLRMNGGEGDTSYAKNSAYNQLVLAKVKPVLEQCVRELLRANLPNINKCIKVADL 60
Query: 58 GCSSGPNTLAIIKDFVQTVEMTSREILQN-PAPEFHFYLNDLPTNDFNSVFKALPDFHRQ 116
GC+SGPNTL ++D VQ+++ +E P +LNDL NDFNSVFK LP F+R+
Sbjct: 61 GCASGPNTLLTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFPNDFNSVFKLLPSFYRK 120
Query: 117 LRNERGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESIN 176
L E G S I PGSFY RLFP S+HF+HS L WLS+VP L E+G N
Sbjct: 121 LEKENGRKIG-SCLIGAMPGSFYSRLFPEESMHFLHSCYCLQWLSQVPSGLVTELGIGTN 179
Query: 177 KGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGN 236
KG+IY S++S V KAY QF +DFT FLR SEEL GRM+L + + G + +D N
Sbjct: 180 KGSIYSSKASRLPVQKAYLDQFTKDFTTFLRIHSEELFSHGRMLLTCICK-GVE-LDARN 237
Query: 237 SFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLDMFQV 296
+ +LL ++ LV +G +E+EKL +++ Y PS EE++ V EGSF++ L+ F+V
Sbjct: 238 AI--DLLEMAINDLVVEGHLEEEKLDSFNLPVYIPSAEEVKCIVEEEGSFEILYLETFKV 295
Query: 297 ERQGHDRGESY------GSAVARTVRAIQESTIIHHFGIGEGVLDNLFEIYGR 343
+D G S VA +VRA+ E + HF GE ++ ++F + +
Sbjct: 296 L---YDAGFSIDDEHIKAEYVASSVRAVYEPILASHF--GEAIIPDIFHRFAK 343
|
Involved in the biosynthesis of caffeine. Specific for xanthosine. Cannot use xanthosine 5'-monophosphate (XMP) as substrate. Directly produces 7-methylxanthine, and therefore the methyl transfer and nucleoside cleavage may be coupled. Catalyzes the 7-N-methylation of xanthosine, but does not have 1-N- or 3-N-methylation activity. Coffea canephora (taxid: 49390) EC: 2 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 5 EC: 8 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 366 | ||||||
| 224097036 | 362 | predicted protein [Populus trichocarpa] | 0.989 | 1.0 | 0.691 | 1e-149 | |
| 255562312 | 363 | Jasmonate O-methyltransferase, putative | 0.991 | 1.0 | 0.683 | 1e-146 | |
| 297735118 | 384 | unnamed protein product [Vitis vinifera] | 0.980 | 0.934 | 0.709 | 1e-143 | |
| 225430690 | 362 | PREDICTED: salicylate O-methyltransferas | 0.980 | 0.991 | 0.709 | 1e-143 | |
| 357487813 | 421 | Salicylic acid methyl transferase-like p | 0.986 | 0.857 | 0.655 | 1e-141 | |
| 15234420 | 371 | S-adenosyl-L-methionine-dependent methyl | 0.989 | 0.975 | 0.643 | 1e-138 | |
| 356499923 | 364 | PREDICTED: salicylate O-methyltransferas | 0.989 | 0.994 | 0.657 | 1e-138 | |
| 351725799 | 364 | salicylic acid methyl transferase-like p | 0.989 | 0.994 | 0.657 | 1e-137 | |
| 297802300 | 370 | S-adenosyl-L-methionine:carboxyl methylt | 0.989 | 0.978 | 0.644 | 1e-135 | |
| 332983477 | 366 | putative jasmonate O-methyltransferase [ | 0.986 | 0.986 | 0.628 | 1e-134 |
| >gi|224097036|ref|XP_002310819.1| predicted protein [Populus trichocarpa] gi|222853722|gb|EEE91269.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 533 bits (1372), Expect = e-149, Method: Compositional matrix adjust.
Identities = 253/366 (69%), Positives = 308/366 (84%), Gaps = 4/366 (1%)
Query: 1 MDVEKLFHMAGGTGPTSYARNSSLQKKASDTVKHITLEALQQLYLEIDPKTINIADLGCS 60
MDVEK+FHM GGTG SYA+NSS QKK SD VKHIT+EALQ++YL + PK++ IADLGCS
Sbjct: 1 MDVEKVFHMTGGTGDNSYAKNSSYQKKVSDMVKHITMEALQEVYLALAPKSLGIADLGCS 60
Query: 61 SGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNE 120
SG N+L+IIKD V+ VE S +I+ PAPEF YLNDLPTNDFNS+FK+LPDF+R L E
Sbjct: 61 SGSNSLSIIKDIVEAVEAASCKIMI-PAPEFRVYLNDLPTNDFNSIFKSLPDFYRDLNKE 119
Query: 121 RGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNI 180
R G P ++IAGYPGSFYGRLFPN+ LHF+HSS SLHWLSKVPP+LY++ G+ INKG+I
Sbjct: 120 RSDGP-PLLFIAGYPGSFYGRLFPNDCLHFVHSSYSLHWLSKVPPSLYDKQGKPINKGSI 178
Query: 181 YISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFW 240
+ISESSP VS+AY+ QFQEDF+LFLRSRSEEL GGRMVLI+LGRIGPDHVDRGNSF+W
Sbjct: 179 HISESSPPLVSQAYYAQFQEDFSLFLRSRSEELTTGGRMVLIMLGRIGPDHVDRGNSFYW 238
Query: 241 ELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLDMFQVERQG 300
ELLSRSLAIL +QGEIEKE + +Y HFYAP+K+E+E E+ REGSF+L++ +MF+ E++
Sbjct: 239 ELLSRSLAILATQGEIEKEDIDSYDVHFYAPTKDEMEAEIRREGSFELERFEMFETEKEL 298
Query: 301 HDRGESYGSAVARTVRAIQESTIIHHFGIGEGVLDNLFEIYGRLVDEEMAKEEIKPLTFV 360
+ E+YG+ VA TVRAIQES + HHF GEG+LD LFEIYGR+V+EEM KEEI P+TFV
Sbjct: 299 YKVSENYGTEVAMTVRAIQESMLSHHF--GEGILDALFEIYGRMVEEEMLKEEINPITFV 356
Query: 361 LLLRKL 366
++LRKL
Sbjct: 357 VVLRKL 362
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255562312|ref|XP_002522163.1| Jasmonate O-methyltransferase, putative [Ricinus communis] gi|223538601|gb|EEF40204.1| Jasmonate O-methyltransferase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 250/366 (68%), Positives = 301/366 (82%), Gaps = 3/366 (0%)
Query: 1 MDVEKLFHMAGGTGPTSYARNSSLQKKASDTVKHITLEALQQLYLEIDPKTINIADLGCS 60
MDVE +FHM GG G SYA+NSS QK ASD VKHIT++A+Q++YL + P+++ IADLGCS
Sbjct: 1 MDVENIFHMKGGIGENSYAKNSSFQKAASDMVKHITIKAVQEVYLALAPESLGIADLGCS 60
Query: 61 SGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNE 120
SGPNTL+IIKD V +E + +++P PEF YLNDLPTNDFNSVFK+LPDF+ L+ E
Sbjct: 61 SGPNTLSIIKDIVLAIEEINCCKIKSPTPEFRVYLNDLPTNDFNSVFKSLPDFYSDLKKE 120
Query: 121 RGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNI 180
R GGS PS++IAGYPGSFYGRLFPNN LHF++SS SLHWLSKVPP LY+E G+ INKGNI
Sbjct: 121 RNGGS-PSLFIAGYPGSFYGRLFPNNCLHFVYSSYSLHWLSKVPPALYDEQGKPINKGNI 179
Query: 181 YISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFW 240
YIS+SSP VS+AY QF+EDF+LFL+SRS+EL+ GG MVLILLGR+GPD VDRGNSFFW
Sbjct: 180 YISKSSPPLVSQAYLMQFKEDFSLFLQSRSQELISGGCMVLILLGRVGPDQVDRGNSFFW 239
Query: 241 ELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLDMFQVERQG 300
ELLSRS+AILVSQGEIEKEKL +Y HFYAPSK+EIE E+ REGSF+L LD+ + E+
Sbjct: 240 ELLSRSVAILVSQGEIEKEKLDSYDVHFYAPSKDEIEAEIRREGSFELVHLDILETEKDY 299
Query: 301 HDRGESYGSAVARTVRAIQESTIIHHFGIGEGVLDNLFEIYGRLVDEEMAKEEIKPLTFV 360
+YG+ VA TVRAIQES I HHF GEG+LD LFE YGR+VDEE+ K+EI P++FV
Sbjct: 300 DKTSGNYGAEVAMTVRAIQESMISHHF--GEGILDTLFETYGRMVDEEVVKQEIDPISFV 357
Query: 361 LLLRKL 366
L+LRKL
Sbjct: 358 LVLRKL 363
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297735118|emb|CBI17480.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 259/365 (70%), Positives = 305/365 (83%), Gaps = 6/365 (1%)
Query: 1 MDVEKLFHMAGGTGPTSYARNSSLQKKASDTVKHITLEALQQLYLEIDPKTINIADLGCS 60
MDVEK FHM GG G TSYARNSSLQKKASD VKHIT+E +QQLYL P+++ IADLGCS
Sbjct: 23 MDVEKAFHMTGGVGETSYARNSSLQKKASDVVKHITIETIQQLYLTTTPRSLGIADLGCS 82
Query: 61 SGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNE 120
SGPNTL+ IKD VE TS + L PAPEF YLNDLPTNDFN++FKALPDF+++LR
Sbjct: 83 SGPNTLSFIKDIFDAVEGTSSQTLL-PAPEFRVYLNDLPTNDFNTIFKALPDFYKELR-- 139
Query: 121 RGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNI 180
+G PS++IAG+PGSFYGRLFP+N LHFI+SS LHWLS+VPP LY+E G SINKGNI
Sbjct: 140 KGSNGRPSIFIAGFPGSFYGRLFPDNCLHFIYSSYGLHWLSQVPPALYDEQGRSINKGNI 199
Query: 181 YISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFW 240
YIS+SSP +VS+ Y +QFQEDF LFLRSRSEEL+ GGRMVLILLGR GPDH DRGN+FFW
Sbjct: 200 YISKSSPPSVSELYLRQFQEDFALFLRSRSEELIEGGRMVLILLGRRGPDHADRGNTFFW 259
Query: 241 ELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLDMFQVERQG 300
ELLSRSLAILVS GE+E+EKL +Y +FYAP+KEEIE EV REGSF+LD+++MF++E+ G
Sbjct: 260 ELLSRSLAILVSWGEVEEEKLHSYAVNFYAPTKEEIEEEVRREGSFELDRVEMFEIEKDG 319
Query: 301 HDRGESYGSAVARTVRAIQESTIIHHFGIGEGVLDNLFEIYGRLVDEEMAKEEIKPLTFV 360
D SYG+ VARTVRAIQES I HF GEG+ D+LFE YGRLVDEEMAKE+I+P+TF+
Sbjct: 320 AD-DMSYGTQVARTVRAIQESMISLHF--GEGIADSLFENYGRLVDEEMAKEDIRPITFL 376
Query: 361 LLLRK 365
L+LRK
Sbjct: 377 LVLRK 381
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225430690|ref|XP_002265889.1| PREDICTED: salicylate O-methyltransferase-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 259/365 (70%), Positives = 305/365 (83%), Gaps = 6/365 (1%)
Query: 1 MDVEKLFHMAGGTGPTSYARNSSLQKKASDTVKHITLEALQQLYLEIDPKTINIADLGCS 60
MDVEK FHM GG G TSYARNSSLQKKASD VKHIT+E +QQLYL P+++ IADLGCS
Sbjct: 1 MDVEKAFHMTGGVGETSYARNSSLQKKASDVVKHITIETIQQLYLTTTPRSLGIADLGCS 60
Query: 61 SGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNE 120
SGPNTL+ IKD VE TS + L PAPEF YLNDLPTNDFN++FKALPDF+++LR
Sbjct: 61 SGPNTLSFIKDIFDAVEGTSSQTLL-PAPEFRVYLNDLPTNDFNTIFKALPDFYKELR-- 117
Query: 121 RGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNI 180
+G PS++IAG+PGSFYGRLFP+N LHFI+SS LHWLS+VPP LY+E G SINKGNI
Sbjct: 118 KGSNGRPSIFIAGFPGSFYGRLFPDNCLHFIYSSYGLHWLSQVPPALYDEQGRSINKGNI 177
Query: 181 YISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFW 240
YIS+SSP +VS+ Y +QFQEDF LFLRSRSEEL+ GGRMVLILLGR GPDH DRGN+FFW
Sbjct: 178 YISKSSPPSVSELYLRQFQEDFALFLRSRSEELIEGGRMVLILLGRRGPDHADRGNTFFW 237
Query: 241 ELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLDMFQVERQG 300
ELLSRSLAILVS GE+E+EKL +Y +FYAP+KEEIE EV REGSF+LD+++MF++E+ G
Sbjct: 238 ELLSRSLAILVSWGEVEEEKLHSYAVNFYAPTKEEIEEEVRREGSFELDRVEMFEIEKDG 297
Query: 301 HDRGESYGSAVARTVRAIQESTIIHHFGIGEGVLDNLFEIYGRLVDEEMAKEEIKPLTFV 360
D SYG+ VARTVRAIQES I HF GEG+ D+LFE YGRLVDEEMAKE+I+P+TF+
Sbjct: 298 AD-DMSYGTQVARTVRAIQESMISLHF--GEGIADSLFENYGRLVDEEMAKEDIRPITFL 354
Query: 361 LLLRK 365
L+LRK
Sbjct: 355 LVLRK 359
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357487813|ref|XP_003614194.1| Salicylic acid methyl transferase-like protein [Medicago truncatula] gi|355515529|gb|AES97152.1| Salicylic acid methyl transferase-like protein [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 240/366 (65%), Positives = 301/366 (82%), Gaps = 5/366 (1%)
Query: 1 MDVEKLFHMAGGTGPTSYARNSSLQKKASDTVKHITLEALQQLYLEIDPKTINIADLGCS 60
MDVEK+FHM GG G TSYA+NSSLQKKASD VKHI +E +++LY+E PK+I IADLGCS
Sbjct: 61 MDVEKVFHMTGGVGKTSYAKNSSLQKKASDKVKHIIIETVEELYIETTPKSIGIADLGCS 120
Query: 61 SGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNE 120
SGPNTL+IIKD QT+++TS +I+ + + EF Y NDLPTNDFNS+FKALP+F + L +
Sbjct: 121 SGPNTLSIIKDIFQTIQVTSHKIMHH-STEFRVYFNDLPTNDFNSIFKALPEFQKLLNQD 179
Query: 121 RGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNI 180
R G PS+++ GYPGSFYGRLFPN+ LHF+HSS+ LHWLS+VPPT+Y+E S+NKG +
Sbjct: 180 RKNGF-PSIFMGGYPGSFYGRLFPNSYLHFVHSSHCLHWLSRVPPTIYDEQKRSLNKGCV 238
Query: 181 YISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFW 240
YI + SP VS+AY+KQFQEDF+LFLRSRSEELVVGG+MVL LGR GP+HVDRGNSFFW
Sbjct: 239 YICDKSPEVVSQAYYKQFQEDFSLFLRSRSEELVVGGKMVLTFLGRRGPEHVDRGNSFFW 298
Query: 241 ELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLDMFQVERQG 300
E+L+RS ILVSQGEIE+EKL +Y HFYAPS+EEIE EV + GS KL++L+MF ++++
Sbjct: 299 EILTRSFTILVSQGEIEQEKLDSYDVHFYAPSREEIEDEVMKAGSLKLERLEMFDIDKKE 358
Query: 301 HDRGESYGSAVARTVRAIQESTIIHHFGIGEGVLDNLFEIYGRLVDEEMAKEEIKPLTFV 360
R ESYG+ VA+ VRAIQES + +HF GE +LD+LFE Y LVDEE+AKE+I P+TFV
Sbjct: 359 QGR-ESYGTDVAKAVRAIQESMVSNHF--GEKILDSLFENYAMLVDEEIAKEDINPITFV 415
Query: 361 LLLRKL 366
L+LRK+
Sbjct: 416 LVLRKI 421
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15234420|ref|NP_195365.1| S-adenosyl-L-methionine-dependent methyltransferase-like protein [Arabidopsis thaliana] gi|4006915|emb|CAB16845.1| hypothetical protein [Arabidopsis thaliana] gi|7270595|emb|CAB80313.1| hypothetical protein [Arabidopsis thaliana] gi|48427662|gb|AAT42380.1| At4g36470 [Arabidopsis thaliana] gi|110741629|dbj|BAE98762.1| hypothetical protein [Arabidopsis thaliana] gi|332661259|gb|AEE86659.1| S-adenosyl-L-methionine-dependent methyltransferase-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 236/367 (64%), Positives = 298/367 (81%), Gaps = 5/367 (1%)
Query: 2 DVEKLFHMAGGTGPTSYARNSSLQKKASDTVKHITLEALQQLYLEIDPKTINIADLGCSS 61
D+E+ F+M GG G TSYARNSSLQKKASDT KHITLE LQQLY E PK++ IADLGCSS
Sbjct: 5 DMEREFYMTGGDGKTSYARNSSLQKKASDTAKHITLETLQQLYKETRPKSLGIADLGCSS 64
Query: 62 GPNTLAIIKDFVQTVEMTS-REILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNE 120
GPNTL+ I DF++TV++ REI P PEF +LNDLP NDFN +FK+LPDFH +L+ +
Sbjct: 65 GPNTLSTITDFIKTVQVAHHREIPIQPLPEFSIFLNDLPGNDFNFIFKSLPDFHIELKRD 124
Query: 121 RGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNI 180
G PSV+IA YPGSFYGRLFP N++HF+++S+SLHWLSKVP LY+E G+SINKG +
Sbjct: 125 NNNGDCPSVFIAAYPGSFYGRLFPENTIHFVYASHSLHWLSKVPTALYDEQGKSINKGCV 184
Query: 181 YISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFW 240
I S AVSKAY QF+EDF++FLR RS+E+V GRMVLI+LGR GPDHVDRGNSFFW
Sbjct: 185 SICSLSSEAVSKAYCSQFKEDFSIFLRCRSKEMVSAGRMVLIILGREGPDHVDRGNSFFW 244
Query: 241 ELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLDMFQVER-Q 299
ELLSRS+A LV+QGE E+EKL +Y HFYAPS +EIEGEV +EGSF+L++L+M +V++ +
Sbjct: 245 ELLSRSIADLVAQGETEEEKLDSYDMHFYAPSADEIEGEVDKEGSFELERLEMLEVKKDK 304
Query: 300 GHDRGE-SYGSAVARTVRAIQESTIIHHFGIGEGVLDNLFEIYGRLVDEEMAKEEIKPLT 358
G+ G+ SYG AVA+TVRA+QES ++ HF GE +LD LF+ Y R+VD+E+AKE+I+P+T
Sbjct: 305 GNTEGDISYGKAVAKTVRAVQESMLVQHF--GEKILDKLFDTYCRMVDDELAKEDIRPIT 362
Query: 359 FVLLLRK 365
FV++LRK
Sbjct: 363 FVVVLRK 369
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356499923|ref|XP_003518785.1| PREDICTED: salicylate O-methyltransferase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust.
Identities = 242/368 (65%), Positives = 303/368 (82%), Gaps = 6/368 (1%)
Query: 1 MDVEKLFHMAGGTGPTSYARNSSLQKKASDTVKHITLEALQQLYLEIDPKTINIADLGCS 60
MDVEK FHM GG G TSYA+NSSLQKK SD VKHI ++ +++LYL PK+I IADLGCS
Sbjct: 1 MDVEKAFHMTGGVGKTSYAKNSSLQKKESDKVKHIIIQTVEELYLATTPKSIGIADLGCS 60
Query: 61 SGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNE 120
SGPNTL+IIKD Q ++ TS+ I+ + + EF Y NDLPTNDFNS+FKALP+F + LR +
Sbjct: 61 SGPNTLSIIKDIFQAIQGTSQRIMHH-STEFRVYFNDLPTNDFNSIFKALPEFQKLLRQD 119
Query: 121 RGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNI 180
R G PS+++ GYPGSFYGRLFPN+ LHF+HSS SLHWLS+VPP+LY+E +NKG +
Sbjct: 120 RKNGF-PSIFMGGYPGSFYGRLFPNSYLHFVHSSFSLHWLSRVPPSLYDEHKRPLNKGCV 178
Query: 181 YISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFW 240
YI ESSP VS+AY++QFQEDF+LFLRSRSEELVVGGRMVLI LGR GP+HVDRGNSFFW
Sbjct: 179 YICESSPEVVSQAYYQQFQEDFSLFLRSRSEELVVGGRMVLIFLGRRGPEHVDRGNSFFW 238
Query: 241 ELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLDMFQVERQG 300
E+LSRS AILVSQGE+E+EK +Y HFYAPS+EEIE EV +EGS KL++L+MF++++
Sbjct: 239 EILSRSFAILVSQGEVEQEKFDSYDVHFYAPSREEIEEEVRKEGSLKLERLEMFEMDKSH 298
Query: 301 HDRG--ESYGSAVARTVRAIQESTIIHHFGIGEGVLDNLFEIYGRLVDEEMAKEEIKPLT 358
++ G ESYG+ VA VRAIQES I HHF GEG+L++LF+ + +LVDEEMAKE+I+P++
Sbjct: 299 NEHGSDESYGTQVAVAVRAIQESMISHHF--GEGILESLFQNFAKLVDEEMAKEDIRPIS 356
Query: 359 FVLLLRKL 366
FVL+LRK+
Sbjct: 357 FVLVLRKI 364
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|351725799|ref|NP_001237105.1| salicylic acid methyl transferase-like protein [Glycine max] gi|194136581|gb|ACF33513.1| salicylic acid methyl transferase-like protein [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 493 bits (1269), Expect = e-137, Method: Compositional matrix adjust.
Identities = 242/368 (65%), Positives = 298/368 (80%), Gaps = 6/368 (1%)
Query: 1 MDVEKLFHMAGGTGPTSYARNSSLQKKASDTVKHITLEALQQLYLEIDPKTINIADLGCS 60
MDVEK HM GG G TSYA+NSSLQKK SD VKHI ++ +++LYL PK+I IADLGCS
Sbjct: 1 MDVEKALHMTGGVGKTSYAKNSSLQKKESDKVKHIIIQTVEELYLATTPKSIGIADLGCS 60
Query: 61 SGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNE 120
SGPNTL+IIKD Q ++ S I+ + + EF Y NDLPTNDFNS+FKA+P+F LR +
Sbjct: 61 SGPNTLSIIKDIFQAIQGISHRIMHH-STEFRVYFNDLPTNDFNSIFKAIPEFQNLLRQD 119
Query: 121 RGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNI 180
R G PS+++ GYPGSFYGRLFPN+ LHF+HSS SLHWLS+VPP LY+E +NKG +
Sbjct: 120 RKNGF-PSIFMGGYPGSFYGRLFPNSYLHFVHSSYSLHWLSRVPPALYDEHKRPLNKGCV 178
Query: 181 YISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFW 240
YI ESSP VS+AY+ QFQEDF+LFLRSRSEELVVGGRMVLI LGR GP+HVDRGNSFFW
Sbjct: 179 YICESSPEVVSQAYYHQFQEDFSLFLRSRSEELVVGGRMVLIFLGRRGPEHVDRGNSFFW 238
Query: 241 ELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLDMFQVERQG 300
E+LSRS AILVSQGEIE+EK +Y AHFYAPS+EEIE EV +EGS K+++L+MF++++
Sbjct: 239 EILSRSFAILVSQGEIEQEKFDSYDAHFYAPSREEIEEEVRKEGSLKMERLEMFEMDKSN 298
Query: 301 HDR--GESYGSAVARTVRAIQESTIIHHFGIGEGVLDNLFEIYGRLVDEEMAKEEIKPLT 358
+++ ESYG+ VA VRAIQES I HHF GEG+L++LFE Y RLVDEEMAKE+I+P++
Sbjct: 299 NEQESSESYGTQVAVAVRAIQESMISHHF--GEGILESLFENYARLVDEEMAKEDIRPIS 356
Query: 359 FVLLLRKL 366
FVL+LRK+
Sbjct: 357 FVLVLRKI 364
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297802300|ref|XP_002869034.1| S-adenosyl-L-methionine:carboxyl methyltransferase family protein [Arabidopsis lyrata subsp. lyrata] gi|297314870|gb|EFH45293.1| S-adenosyl-L-methionine:carboxyl methyltransferase family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 236/366 (64%), Positives = 295/366 (80%), Gaps = 4/366 (1%)
Query: 2 DVEKLFHMAGGTGPTSYARNSSLQKKASDTVKHITLEALQQLYLEIDPKTINIADLGCSS 61
D+E+ FHM GG G TSYARNSSLQKKASD KHITLE LQQLY E PK++ IADLGCSS
Sbjct: 5 DLEREFHMTGGDGKTSYARNSSLQKKASDVAKHITLETLQQLYKETRPKSLGIADLGCSS 64
Query: 62 GPNTLAIIKDFVQTVEMTS-REILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNE 120
GPNTL+ IKDF++TV++ REI P PEF +LNDLP NDFNS+FK+LPDFH +L+ +
Sbjct: 65 GPNTLSTIKDFIKTVQVAHHREIPNQPLPEFSIFLNDLPGNDFNSIFKSLPDFHIELKRD 124
Query: 121 RGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNI 180
G SPSV+IA YPGSFYGRLFP ++HF+++S SLHWLSKVP LY+E G+SINKG +
Sbjct: 125 NNNGDSPSVFIAAYPGSFYGRLFPEKTIHFVYASYSLHWLSKVPAALYDEQGKSINKGCV 184
Query: 181 YISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFW 240
I SS AVS+AY+ QF+EDF++FLR RS+E+V GRMVLI+LGR GP HVDRGNSFFW
Sbjct: 185 SICSSSSEAVSEAYYSQFKEDFSIFLRCRSKEMVAAGRMVLIILGREGPGHVDRGNSFFW 244
Query: 241 ELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLDMFQVERQG 300
ELLSRS+A LV+QGE E+EKL +Y HFYAPS +EIEGEV +EGSF L++L+M +VE+
Sbjct: 245 ELLSRSIADLVAQGETEEEKLDSYDMHFYAPSADEIEGEVNKEGSFDLERLEMLEVEKDK 304
Query: 301 HDRGE-SYGSAVARTVRAIQESTIIHHFGIGEGVLDNLFEIYGRLVDEEMAKEEIKPLTF 359
+ + SYG AVA+TVRA+QES ++ +F GE +LD LF+ Y R+VDEE+AKE+I+P+TF
Sbjct: 305 ENVNDTSYGKAVAKTVRAVQESMLVQYF--GEKILDKLFDTYSRMVDEELAKEDIRPITF 362
Query: 360 VLLLRK 365
V++LRK
Sbjct: 363 VVVLRK 368
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|332983477|gb|AEE39465.1| putative jasmonate O-methyltransferase [Nicotiana attenuata] | Back alignment and taxonomy information |
|---|
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 232/369 (62%), Positives = 298/369 (80%), Gaps = 8/369 (2%)
Query: 1 MDVEKLFHMAGGTGPTSYARNSSLQKKASDTVKHITLEALQQLYLEIDPKTINIADLGCS 60
MDV+K+FHM GG G TSY+RNSSLQKKASD VKHI LE ++++YL PK+I IADLGCS
Sbjct: 1 MDVDKVFHMRGGVGETSYSRNSSLQKKASDMVKHIILETVEEVYLATKPKSIGIADLGCS 60
Query: 61 SGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLR-- 118
SGPNTL+ +KD + +E +SR L+ APEF +LNDLPTNDFN++F+ALP+FH+ L+
Sbjct: 61 SGPNTLSNLKDMLDKIESSSRNKLKQQAPEFRVFLNDLPTNDFNAIFQALPNFHQLLKQK 120
Query: 119 --NERGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESIN 176
N+ GG+S ++YIA YPGSFYGRLFP++ LHFI+SS SLHWLSKVPP LY+E G S+N
Sbjct: 121 RKNDENGGTS-NIYIAAYPGSFYGRLFPDHCLHFIYSSYSLHWLSKVPPGLYDEQGNSLN 179
Query: 177 KGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGN 236
K +IYISE SPS VSKAYF QF+EDF+LFL SRS+ELV G+MVLILLGR G +HVDRGN
Sbjct: 180 KNSIYISEHSPSGVSKAYFDQFEEDFSLFLHSRSDELVSRGKMVLILLGREGFNHVDRGN 239
Query: 237 SFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLDMFQV 296
+FFW++L ++L L+S+GE+EKEKL +Y HFYAP KEEIE V G F++++L+ F++
Sbjct: 240 AFFWKILYQALTNLISKGEVEKEKLESYDVHFYAPCKEEIEAAVKVNGCFEVERLETFEI 299
Query: 297 ERQGHDRGESYGSAVARTVRAIQESTIIHHFGIGEGVLDNLFEIYGRLVDEEMAKEEIKP 356
E+ +G SYG+ VA TVR+IQES + HHF GE ++++LF+ YGRLVDEEMAKEEI+P
Sbjct: 300 EKTT-AKGMSYGTTVAMTVRSIQESMVAHHF--GEAIVEDLFQEYGRLVDEEMAKEEIRP 356
Query: 357 LTFVLLLRK 365
+TF+L+LRK
Sbjct: 357 ITFLLVLRK 365
|
Source: Nicotiana attenuata Species: Nicotiana attenuata Genus: Nicotiana Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 366 | ||||||
| TAIR|locus:2115400 | 371 | AT4G36470 [Arabidopsis thalian | 0.989 | 0.975 | 0.643 | 1.1e-126 | |
| TAIR|locus:2013149 | 389 | JMT "jasmonic acid carboxyl me | 0.939 | 0.884 | 0.427 | 7e-70 | |
| TAIR|locus:2080747 | 379 | BSMT1 [Arabidopsis thaliana (t | 0.937 | 0.905 | 0.410 | 1.1e-64 | |
| TAIR|locus:2154845 | 354 | AT5G66430 [Arabidopsis thalian | 0.934 | 0.966 | 0.387 | 2.7e-61 | |
| TAIR|locus:2179929 | 415 | NAMT1 [Arabidopsis thaliana (t | 0.934 | 0.824 | 0.390 | 5.7e-59 | |
| TAIR|locus:2179969 | 385 | AT5G04380 "AT5G04380" [Arabido | 0.931 | 0.885 | 0.388 | 6.6e-58 | |
| TAIR|locus:2095572 | 368 | AT3G21950 [Arabidopsis thalian | 0.937 | 0.932 | 0.376 | 5.9e-57 | |
| TAIR|locus:2144466 | 368 | AT5G38020 [Arabidopsis thalian | 0.939 | 0.934 | 0.380 | 9.6e-57 | |
| TAIR|locus:2053458 | 359 | AT2G14060 [Arabidopsis thalian | 0.934 | 0.952 | 0.354 | 2.1e-54 | |
| TAIR|locus:2161680 | 386 | IAMT1 "AT5G55250" [Arabidopsis | 0.980 | 0.930 | 0.335 | 8.8e-47 |
| TAIR|locus:2115400 AT4G36470 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1244 (443.0 bits), Expect = 1.1e-126, P = 1.1e-126
Identities = 236/367 (64%), Positives = 298/367 (81%)
Query: 2 DVEKLFHMAGGTGPTSYARNSSLQKKASDTVKHITLEALQQLYLEIDPKTINIADLGCSS 61
D+E+ F+M GG G TSYARNSSLQKKASDT KHITLE LQQLY E PK++ IADLGCSS
Sbjct: 5 DMEREFYMTGGDGKTSYARNSSLQKKASDTAKHITLETLQQLYKETRPKSLGIADLGCSS 64
Query: 62 GPNTLAIIKDFVQTVEMTS-REILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNE 120
GPNTL+ I DF++TV++ REI P PEF +LNDLP NDFN +FK+LPDFH +L+ +
Sbjct: 65 GPNTLSTITDFIKTVQVAHHREIPIQPLPEFSIFLNDLPGNDFNFIFKSLPDFHIELKRD 124
Query: 121 RGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNI 180
G PSV+IA YPGSFYGRLFP N++HF+++S+SLHWLSKVP LY+E G+SINKG +
Sbjct: 125 NNNGDCPSVFIAAYPGSFYGRLFPENTIHFVYASHSLHWLSKVPTALYDEQGKSINKGCV 184
Query: 181 YISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFW 240
I S AVSKAY QF+EDF++FLR RS+E+V GRMVLI+LGR GPDHVDRGNSFFW
Sbjct: 185 SICSLSSEAVSKAYCSQFKEDFSIFLRCRSKEMVSAGRMVLIILGREGPDHVDRGNSFFW 244
Query: 241 ELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLDMFQVER-Q 299
ELLSRS+A LV+QGE E+EKL +Y HFYAPS +EIEGEV +EGSF+L++L+M +V++ +
Sbjct: 245 ELLSRSIADLVAQGETEEEKLDSYDMHFYAPSADEIEGEVDKEGSFELERLEMLEVKKDK 304
Query: 300 GHDRGE-SYGSAVARTVRAIQESTIIHHFGIGEGVLDNLFEIYGRLVDEEMAKEEIKPLT 358
G+ G+ SYG AVA+TVRA+QES ++ HFG E +LD LF+ Y R+VD+E+AKE+I+P+T
Sbjct: 305 GNTEGDISYGKAVAKTVRAVQESMLVQHFG--EKILDKLFDTYCRMVDDELAKEDIRPIT 362
Query: 359 FVLLLRK 365
FV++LRK
Sbjct: 363 FVVVLRK 369
|
|
| TAIR|locus:2013149 JMT "jasmonic acid carboxyl methyltransferase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 708 (254.3 bits), Expect = 7.0e-70, P = 7.0e-70
Identities = 159/372 (42%), Positives = 225/372 (60%)
Query: 1 MDVEKLFHMAGGTGPTSYARNSSLQKKASDTVKHITLEALQQLYLE-IDPKTINIADLGC 59
M+V ++ HM G G TSYA+NS+ Q + + EAL++L + + +I IADLGC
Sbjct: 1 MEVMRVLHMNKGNGETSYAKNSTAQSNIISLGRRVMDEALKKLMMSNSEISSIGIADLGC 60
Query: 60 SSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRN 119
SSGPN+L I + V T+ + L P PE LNDLP+NDFN + +LP+F+ ++ N
Sbjct: 61 SSGPNSLLSISNIVDTIHNLCPD-LDRPVPELRVSLNDLPSNDFNYICASLPEFYDRVNN 119
Query: 120 ERGG-----GSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGES 174
+ G G S +++ PGSFYGRLFP SLHF+HSS+SLHWLS+VP + +
Sbjct: 120 NKEGLGFGRGGGESCFVSAVPGSFYGRLFPRRSLHFVHSSSSLHWLSQVPCREAEKEDRT 179
Query: 175 I-----NKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGP 229
I N G IYIS++SP + KAY QFQ DF +FLRSRSEELV GGRMVL LGR
Sbjct: 180 ITADLENMGKIYISKTSPKSAHKAYALQFQTDFWVFLRSRSEELVPGGRMVLSFLGRRSL 239
Query: 230 DHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLD 289
D + + WELL+++L + +G IE+EK+ A++A +YA S EE++ + +EGSF +D
Sbjct: 240 DPTTEESCYQWELLAQALMSMAKEGIIEEEKIDAFNAPYYAASSEELKMVIEKEGSFSID 299
Query: 290 QLDMFQVERQGHDRGE-SY-------------GSAVARTVRAIQESTIIHHFGIGEGVLD 335
+L++ ++ +G E SY G V+ T+RA+ E + FG E V+D
Sbjct: 300 RLEISPIDWEGGSISEESYDLVIRSKPEALASGRRVSNTIRAVVEPMLEPTFG--ENVMD 357
Query: 336 NLFEIYGRLVDE 347
LFE Y ++V E
Sbjct: 358 ELFERYAKIVGE 369
|
|
| TAIR|locus:2080747 BSMT1 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 659 (237.0 bits), Expect = 1.1e-64, P = 1.1e-64
Identities = 152/370 (41%), Positives = 214/370 (57%)
Query: 5 KLFHMAGGTGPTSYARNSSLQKKASDTVKHITLEALQQLYLEID-PKTINIADLGCSSGP 63
K M+GG G SY+ NS LQKK K + + +++ + +D P I +A+LGCSSG
Sbjct: 27 KALCMSGGDGANSYSANSRLQKKVLSMAKPVLVRNTEEMMMNLDFPTYIKVAELGCSSGQ 86
Query: 64 NTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGG 123
N+ I + + T+ + + + +N +PE LNDLP NDFN+ FK +P F+++L
Sbjct: 87 NSFLAIFEIINTINVLCQHVNKN-SPEIDCCLNDLPENDFNTTFKFVPFFNKELMIT--- 142
Query: 124 GSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYIS 183
+ S ++ G PGSFY RLF NSLH IHSS +LHWLSKVP L N NKGN+YI+
Sbjct: 143 -NKSSCFVYGAPGSFYSRLFSRNSLHLIHSSYALHWLSKVPEKLEN------NKGNLYIT 195
Query: 184 ESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIG-PDHVDRGNSFFWEL 242
SSP + KAY QFQ+DFT+FLR RSEE+V GRMVL +GR D + R FW L
Sbjct: 196 SSSPQSAYKAYLNQFQKDFTMFLRLRSEEIVSNGRMVLTFIGRNTLNDPLYRDCCHFWTL 255
Query: 243 LSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLDMFQVERQGHD 302
LS SL LV +G + + KL A++ FY P+ +E++ + +EGSF++++L E G D
Sbjct: 256 LSNSLRDLVFEGLVSESKLDAFNMPFYDPNVQELKEVIQKEGSFEINEL-----ESHGFD 310
Query: 303 RGESY-------GSAVARTVRAIQESTIIHHFGIGEGVLDNLFEIYGRLVDEEMAKEEIK 355
G Y G A +RA+ E +I HFG E ++D LF+ Y V +
Sbjct: 311 LGHYYEEDDFEAGRNEANGIRAVSEPMLIAHFG--EEIIDTLFDKYAYHVTQHANCRNKT 368
Query: 356 PLTFVLLLRK 365
++ V+ L K
Sbjct: 369 TVSLVVSLTK 378
|
|
| TAIR|locus:2154845 AT5G66430 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 627 (225.8 bits), Expect = 2.7e-61, P = 2.7e-61
Identities = 143/369 (38%), Positives = 210/369 (56%)
Query: 9 MAGGTGPTSYARNSSLQKKASDTVKHITLEALQQLYLEID-PKTINIADLGCSSGPNTLA 67
M+GG G SY+ NS LQKK K + ++ + + + ++ P I +ADLGC++G NT
Sbjct: 1 MSGGDGDNSYSTNSLLQKKVLSKAKPVLVKNTKGMMINLNFPNYIKVADLGCATGENTFL 60
Query: 68 IIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSP 127
+ + V T+ + ++ Q P PE LNDLP NDFN+ FK +P F+++++++R
Sbjct: 61 TMAEIVNTINVLCQQCNQKP-PEIDCCLNDLPDNDFNTTFKFVPFFNKRVKSKR------ 113
Query: 128 SVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSP 187
+++G PGSFY RLFP SLHF+HSS SLHWLSKVP L N ++YI+ SSP
Sbjct: 114 LCFVSGVPGSFYSRLFPRKSLHFVHSSYSLHWLSKVPKGLEK------NSSSVYITTSSP 167
Query: 188 SAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIG-PDHVDRGNSFFWELLSRS 246
KAY QFQ DF FL RSEE+V GRMVL +GR D + R FW LLS S
Sbjct: 168 PNAYKAYLNQFQSDFKSFLEMRSEEMVSNGRMVLTFIGRKTLDDPLHRDCCHFWTLLSTS 227
Query: 247 LAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLDM--FQVERQGHDRG 304
L LV +G + K+ +++ FY PSKEE+ + EGSF+++ L++ F++ HD
Sbjct: 228 LRDLVYEGLVSASKVDSFNIPFYDPSKEEVMEMIRNEGSFEINDLEIHGFELGLSNHDED 287
Query: 305 -------ESYGSAVARTVRAIQESTIIHHFGIGEGVLDNLFEIYGRLVDEEMAKEEIKPL 357
G A +RA+ ES ++ FG+ ++D LF+ + V + + +
Sbjct: 288 YMLHSQISKAGQREANCIRAVSESMLVADFGVD--IMDTLFKKFAYHVSQHASCTNKTTV 345
Query: 358 TFVL-LLRK 365
T V+ L+RK
Sbjct: 346 TLVVSLIRK 354
|
|
| TAIR|locus:2179929 NAMT1 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 605 (218.0 bits), Expect = 5.7e-59, P = 5.7e-59
Identities = 142/364 (39%), Positives = 208/364 (57%)
Query: 9 MAGGTGPTSYARNSSLQKKASDTVKHITLEALQQLYLEID-PKTINIADLGCSSGPNTLA 67
M GG G SY+ NS LQ++ K + ++ + L + ++ P I +ADLGCSSG NT
Sbjct: 60 MRGGDGYNSYSSNSLLQRRVLSKAKPVLVKNTKDLMINLNFPTYIKVADLGCSSGQNTFL 119
Query: 68 IIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSP 127
+ + + T+ + ++ QNP PE LNDLP+NDFN+ FK + F N S
Sbjct: 120 AMSEIINTINVFCQQRNQNP-PEIDCCLNDLPSNDFNTTFKFIQFF-----NGMNITSKE 173
Query: 128 SVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSP 187
S ++ G PGSFY RLFP SLHF+HSS LHWLSKVP L NK ++YI+ SSP
Sbjct: 174 SYFVYGVPGSFYSRLFPRRSLHFVHSSYGLHWLSKVPEGLEK------NKMSVYITNSSP 227
Query: 188 SAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDH-VDRGNSFFWELLSRS 246
+ KAY QFQ DF FL+ RSEE+V GRMVL +GR D+ + R FW LLS+S
Sbjct: 228 LSTYKAYLNQFQRDFATFLKLRSEEMVSNGRMVLTFIGRNTIDNPLHRDCCHFWTLLSKS 287
Query: 247 LAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLDMFQVERQGH-DRGE 305
L LV++G + K+ +++ FY P+++EI+ V +EGSF++ L+ + GH ++ E
Sbjct: 288 LRDLVAEGLVSASKVDSFYLPFYDPNEKEIKEMVQKEGSFEIRDLETHGYDL-GHCNQDE 346
Query: 306 SY----GSAVARTVRAIQESTIIHHFGIGEGVLDNLFEIYGRLVDEEMAKEEIKPLTFVL 361
S G A +RA+ E + HFG + +++ LF + V + ++ ++ V+
Sbjct: 347 SKRSKSGQNEANYIRAVSEPLLAAHFG--DAIINILFNKFACHVSQHVSCRNKTTVSIVV 404
Query: 362 LLRK 365
L K
Sbjct: 405 SLTK 408
|
|
| TAIR|locus:2179969 AT5G04380 "AT5G04380" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 595 (214.5 bits), Expect = 6.6e-58, P = 6.6e-58
Identities = 143/368 (38%), Positives = 212/368 (57%)
Query: 9 MAGGTGPTSYARNSSLQKKASDTVKHITLEALQQLYLEID-PKTINIADLGCSSGPNTLA 67
M GG SY S LQK+ I ++ +++ +D PK I +ADLGCSSG NT
Sbjct: 34 MNGGDVDNSYTTKSLLQKRVLSITNPILVKNTEEMLTNLDFPKCIKVADLGCSSGQNTFL 93
Query: 68 IIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSP 127
+ + V T+ + ++ Q+ PE LNDLPTNDFN+ FK + F+++L S+
Sbjct: 94 AMSEIVNTINVLCQKWNQS-RPEIDCCLNDLPTNDFNTTFKFITFFNKKLT------SNG 146
Query: 128 SVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSP 187
S +++G PGSFY RLFP SLHFI+S S+H+LSKVP L NK ++YI+ SSP
Sbjct: 147 SCFVSGVPGSFYSRLFPRKSLHFIYSIYSIHFLSKVPDGLEK------NKMSVYITSSSP 200
Query: 188 SAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDH-VDRGNSFFWELLSRS 246
+ KAY QF+ DFT FLR RSEE+V GRMVL L+GR D+ + R W LLS S
Sbjct: 201 LSEYKAYLNQFKRDFTTFLRMRSEEMVHNGRMVLTLIGRNTLDNPLYRDCCHCWTLLSNS 260
Query: 247 LAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLDMFQVERQGHDRG-- 304
L LV +G + K+ ++ FY P++EE++ + EGSF+++ L+M + + GH +
Sbjct: 261 LRDLVFEGLLSASKVYSFKMPFYDPNEEEVKEIIRNEGSFQINDLEMHEFDL-GHSKEKC 319
Query: 305 --ESY----GSAVARTVRAIQESTIIHHFGIGEGVLDNLFEIYGRLVDEEMAKEEIKPLT 358
+S+ G A +RA+ E+ ++ HFG + ++D LF Y V + + +T
Sbjct: 320 SLQSHKAKAGQKEASCIRAVTETMLVAHFG--DDIIDALFHKYAHHVSQHASCRVKTSVT 377
Query: 359 FVL-LLRK 365
++ L+RK
Sbjct: 378 LIVSLVRK 385
|
|
| TAIR|locus:2095572 AT3G21950 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 586 (211.3 bits), Expect = 5.9e-57, P = 5.9e-57
Identities = 142/377 (37%), Positives = 212/377 (56%)
Query: 9 MAGGTGPTSYARNSSLQKKASDTVKHITLEALQQLYLEID-PKTINIADLGCSSGPNTLA 67
M GG G SYA NS QK + K ++++ ++ +++D P I +ADLGCSSG NT
Sbjct: 6 MKGGDGEHSYANNSEAQKSITSDAKPEVMKSVNEMIVKMDFPGCIKVADLGCSSGENTFL 65
Query: 68 IIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLR-NERGGGSS 126
++ + V T+ T ++ QN PE LNDLP NDFN+ FK +P FH +L+ N +G
Sbjct: 66 VMSEIVNTIITTYQQNGQN-LPEIDCCLNDLPENDFNTTFKLIPSFHEKLKMNVKG---- 120
Query: 127 PSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESS 186
+ Y++G PGSFY RLFP+ SLHF+HSS LHWLSKVP L NK N+Y+
Sbjct: 121 -NCYVSGCPGSFYTRLFPSKSLHFVHSSFCLHWLSKVPDGLEE------NKKNVYLRSPC 173
Query: 187 PSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRS 246
P + ++Y+ QF++DF++FLR R+EE + GRM L L+GR D + + W L+S S
Sbjct: 174 PPNLYESYWNQFKKDFSMFLRMRAEETMPSGRMALTLVGRKTLDPLSKECFKDWSLVSDS 233
Query: 247 LAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLD-MFQV---ERQGH- 301
L LVS+G +++ L +++ +Y+P + E++ + EGSF++ + +F + + GH
Sbjct: 234 LLDLVSEGVVKESDLESFNLPYYSPDESEVKEVIENEGSFEIKNFETIFGLLFSYKTGHS 293
Query: 302 -------DRGESYGSAVART----VRAIQESTIIHHFGIGEGVLDNLFEIYGRLVDEEMA 350
D S V +T R+I E ++ HFG E ++D LF+ Y +
Sbjct: 294 EVKDDDDDVDHSRRFEVVKTRANMTRSIIEPMLVAHFG--EAIIDRLFDKYIYHACQRYD 351
Query: 351 KEEIKPLT--FVLLLRK 365
KP FV L RK
Sbjct: 352 TLRNKPTVNFFVSLTRK 368
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| TAIR|locus:2144466 AT5G38020 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 584 (210.6 bits), Expect = 9.6e-57, P = 9.6e-57
Identities = 143/376 (38%), Positives = 207/376 (55%)
Query: 9 MAGGTGPTSYARNSSLQKKASDTVKHITLEALQQLYLEID-PKTINIADLGCSSGPNTLA 67
M GG G SYA NS QK+ + K + +E ++++ ++ D P I +ADLGCSSG NTL
Sbjct: 6 MKGGDGEHSYANNSEGQKRLASDAKPVVVETVKEMIVKTDFPGCIKVADLGCSSGENTLL 65
Query: 68 IIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSP 127
++ + V T+ +TS + PE + LNDLP NDFN+ FK +P FH+ L+ + G
Sbjct: 66 VMSEIVNTI-ITSYQQKGKNLPEINCCLNDLPDNDFNTTFKLVPAFHKLLKMDVKG---- 120
Query: 128 SVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSP 187
+I+G PGSFY RLFP+ SLHF+HSS LHWLSKVP L + NK N+Y+ P
Sbjct: 121 KCFISGVPGSFYSRLFPSKSLHFVHSSLCLHWLSKVPDGLED------NKKNVYLRSPCP 174
Query: 188 SAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSL 247
V K+Y QF+ DF+LFLR R++E V GRM L +GR D + + W +S SL
Sbjct: 175 PNVYKSYLTQFKNDFSLFLRLRADETVPNGRMALTFVGRKSLDPLSKDCFQNWSSISDSL 234
Query: 248 AILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLD-----MF-------Q 295
LVS+G +++ + +++ FY P + E+ + EGSFK+ + +F +
Sbjct: 235 LDLVSEGIVKESDVDSFNLPFYNPDESEVREVIESEGSFKISNFETIFGLLFSYKTGRTE 294
Query: 296 VERQGHDRGESYGSAVART----VRAIQESTIIHHFGIGEGVLDNLFEIYGRLVDEEMAK 351
V+ + +S V R +R+I E + HFG + ++D LFE Y + E
Sbjct: 295 VKDDDDNLDQSCRFEVIRKRASIIRSITEPMLGAHFG--DAIMDRLFERYTYHLAERYDT 352
Query: 352 EEIKPLT--FVLLLRK 365
KP FV L RK
Sbjct: 353 LRNKPTVQFFVSLTRK 368
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| TAIR|locus:2053458 AT2G14060 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
Identities = 130/367 (35%), Positives = 208/367 (56%)
Query: 9 MAGGTGPTSYARNSSLQKKASDTVKHITLEALQQLYLEID-PKTINIADLGCSSGPNTLA 67
M GGTG SYA NS Q+ ++ + +E ++++ L+ P I +ADLGCS+G NT+
Sbjct: 1 MKGGTGDHSYATNSHYQRSVFYEIQPLVIENVREMLLKNGFPGCIKVADLGCSTGQNTVL 60
Query: 68 IIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSP 127
+ T+ + +++ +NP PE YLNDLP NDFN+ FK F +L+ E G
Sbjct: 61 AMSAIAYTIMESYQQMSKNP-PEIDCYLNDLPENDFNTTFKLFHSFQEKLKPEVKG---- 115
Query: 128 SVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSP 187
+++G PGSFY RLFP SLHF+HS+ S+HWLS++P L ES N +I+I P
Sbjct: 116 KWFVSGVPGSFYSRLFPRKSLHFVHSAFSIHWLSRIPDGL-----ES-NTKSIHIKYPYP 169
Query: 188 SAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSL 247
S V K+Y QF+ DF+LFL+ RSEE+V G MVL +GR D + + W LLS L
Sbjct: 170 SNVYKSYLNQFKIDFSLFLKMRSEEVVHNGHMVLTFVGRKVSDTLSKDCFQVWSLLSDCL 229
Query: 248 AILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLDMF------QVERQGH 301
L S+G + + +++ FY P++EE+ + +EGSF++ +++ F +++R+
Sbjct: 230 LDLASEGFVNDSMVKSFNMPFYNPNEEEVREFILKEGSFEITKIEKFDHVVPYKIDREEE 289
Query: 302 DRGESY----GSAVARTVRAIQESTIIHHFGIGEGVLDNLFEIYGRLVDEEMA-KEEIKP 356
D +S G A R I E ++ HFG + +++ +F Y + + ++ +
Sbjct: 290 DEEQSLQLEAGIKHASWARCITEPLLVAHFG--DAIIEPVFNKYAHYMAKYLSVSNHRRN 347
Query: 357 LTFVLLL 363
+T V+++
Sbjct: 348 MTLVIVV 354
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| TAIR|locus:2161680 IAMT1 "AT5G55250" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
Identities = 127/378 (33%), Positives = 194/378 (51%)
Query: 1 MDVEKLFHMAGGTGPTSYARNSSLQKKASDTVKHITLEALQQLYLE--IDPKTINIADLG 58
M +E+L M GG G SYA NS Q + ++ H+ E L+ ++L P DLG
Sbjct: 13 MKLERLLSMKGGKGQDSYANNSQAQAMHARSMLHLLEETLENVHLNSSASPPPFTAVDLG 72
Query: 59 CSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLR 118
CSSG NT+ II V+ + +P PEF + +DLP+NDFN++F+ LP
Sbjct: 73 CSSGANTVHIIDFIVKHISKRFDAAGIDP-PEFTAFFSDLPSNDFNTLFQLLPPLVSNTC 131
Query: 119 NER--GGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESIN 176
E + S ++AG PGSFY RLFP ++ F HS+ SLHWLS+VP ++ + + N
Sbjct: 132 MEECLAADGNRSYFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYN 191
Query: 177 KGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGN 236
+G ++I + + AY +QFQ D FLR+R+ E+ GG M L+ LGR D D+G
Sbjct: 192 RGRVFIHGAGEKTTT-AYKRQFQADLAEFLRARAAEVKRGGAMFLVCLGRTSVDPTDQGG 250
Query: 237 S--FFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLDMF 294
+ F + LV +G + EK ++ YAPS ++ + V GSF +D+L ++
Sbjct: 251 AGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIPVYAPSLQDFKEVVDANGSFAIDKLVVY 310
Query: 295 Q-----VERQGHDRGESYGSAVARTVRAIQESTIIHHFGIGEGVLDNLFE-IYGRLVDEE 348
+ V + D E G A A + R++ + H IGE + + LF + R
Sbjct: 311 KGGSPLVVNEPDDASE-VGRAFASSCRSVAGVLVEAH--IGEELSNKLFSRVESRATSH- 366
Query: 349 MAKEEIKPLTFVLLLRKL 366
AK+ + L F ++ L
Sbjct: 367 -AKDVLVNLQFFHIVASL 383
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 4th Layer | 2.1.1.141 | LOW CONFIDENCE prediction! |
| 3rd Layer | 2.1.1 | 0.921 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | fgenesh4_pg.C_LG_VII001116 | hypothetical protein (362 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 366 | |||
| pfam03492 | 331 | pfam03492, Methyltransf_7, SAM dependent carboxyl | 1e-129 | |
| PLN02668 | 386 | PLN02668, PLN02668, indole-3-acetate carboxyl meth | 1e-64 |
| >gnl|CDD|217591 pfam03492, Methyltransf_7, SAM dependent carboxyl methyltransferase | Back alignment and domain information |
|---|
Score = 372 bits (958), Expect = e-129
Identities = 151/341 (44%), Positives = 212/341 (62%), Gaps = 22/341 (6%)
Query: 36 TLEALQQLYL-EIDPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFY 94
EA+ +L L + P +I IADLGCSSGPNT + + + TVE ++ PEF +
Sbjct: 1 LEEAISELLLRNLFPNSIKIADLGCSSGPNTFLAVSNIIDTVEKKYQKENILEPPEFQVF 60
Query: 95 LNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSS 154
NDLP+NDFN++FK LP F ++ R S +++G PGSFYGRLFP NSLHF+HSS
Sbjct: 61 FNDLPSNDFNTLFKLLPPFQKKKR---------SYFVSGVPGSFYGRLFPRNSLHFVHSS 111
Query: 155 NSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELV 214
SLHWLS+VP L ++ + NKGNIYIS +SP V KAY QF++DF+LFLR+R+EELV
Sbjct: 112 YSLHWLSQVPKGLEDKESPAWNKGNIYISGASPEEVYKAYLDQFKKDFSLFLRARAEELV 171
Query: 215 VGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKE 274
GG MVL LGR D + FW+LL +L LVS+G IE+EKL +++ YAPS E
Sbjct: 172 SGGLMVLTFLGRPSVDPSETECGIFWDLLGDALNDLVSEGLIEEEKLDSFNIPIYAPSPE 231
Query: 275 EIEGEVGREGSFKLDQLDMFQVERQGHDRGES-------YGSAVARTVRAIQESTIIHHF 327
E++ + +EGSF +++L++ + ES G VA +VRA+ E ++ HF
Sbjct: 232 EVKEIIEKEGSFTIERLEIIKHPNGEVPWDESDSEDKVEDGRFVASSVRAVVEPMLVAHF 291
Query: 328 GIGEGVLDNLFEIYGRLVDEEMAKEEI---KPLTFVLLLRK 365
GE ++D LF+ Y + + E ++KE K + V+ L +
Sbjct: 292 --GEDIMDKLFDRYAKKLSEHLSKELQNAKKTINVVVSLSR 330
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This family of plant methyltransferases contains enzymes that act on a variety of substrates including salicylic acid, jasmonic acid and 7-Methylxanthine. Caffeine is synthesised through sequential three-step methylation of xanthine derivatives at positions 7-N, 3-N, and 1-N. The protein 7-methylxanthine methyltransferase (designated as CaMXMT) catalyzes the second step to produce theobromine. Length = 331 |
| >gnl|CDD|178273 PLN02668, PLN02668, indole-3-acetate carboxyl methyltransferase | Back alignment and domain information |
|---|
Score = 210 bits (535), Expect = 1e-64
Identities = 123/354 (34%), Positives = 187/354 (52%), Gaps = 24/354 (6%)
Query: 1 MDVEKLFHMAGGTGPTSYARNSSLQKKASDTVKHITLEALQQLYLEIDP-KTINIADLGC 59
M +EKL M GG G SYA NS Q + ++ H+ E L ++L P DLGC
Sbjct: 13 MKLEKLLCMKGGKGEGSYANNSQAQALHARSMLHLLEETLDNVHLNSSPEVPFTAVDLGC 72
Query: 60 SSGPNTL----AIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALP---D 112
SSG NT+ I+K + E + PEF + +DLP+NDFN++F+ LP +
Sbjct: 73 SSGSNTIHIIDVIVKHMSKRYESAGLD-----PPEFSAFFSDLPSNDFNTLFQLLPPLAN 127
Query: 113 FHRQLRNERGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMG 172
+ + S + AG PGSFY RLFP S+ HS+ SLHWLS+VP ++ ++
Sbjct: 128 YGGSMEECLAASGHRSYFAAGVPGSFYRRLFPARSIDVFHSAFSLHWLSQVPESVTDKRS 187
Query: 173 ESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHV 232
+ NKG ++I +S + + AY +QFQ D FLR+R++E+ GG M L+ LGR D
Sbjct: 188 AAYNKGRVFIHGAS-ESTANAYKRQFQADLAGFLRARAQEMKRGGAMFLVCLGRTSVDPT 246
Query: 233 DRGNS--FFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQ 290
D+G + F + LV +G + EK +++ YAPS ++ + V GSF +D+
Sbjct: 247 DQGGAGLLFGTHFQDAWDDLVQEGLVTSEKRDSFNIPVYAPSLQDFKEVVEANGSFAIDK 306
Query: 291 LDMFQ-----VERQGHDRGESYGSAVARTVRAIQESTIIHHFGIGEGVLDNLFE 339
L++F+ V + D E G A+A + R++ + H IGE + + LF
Sbjct: 307 LEVFKGGSPLVVNEPDDAAE-VGRAMANSCRSVAGVLVDAH--IGEELSNELFL 357
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Length = 386 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 366 | |||
| PLN02668 | 386 | indole-3-acetate carboxyl methyltransferase | 100.0 | |
| PF03492 | 334 | Methyltransf_7: SAM dependent carboxyl methyltrans | 100.0 | |
| PRK01683 | 258 | trans-aconitate 2-methyltransferase; Provisional | 99.58 | |
| PRK14103 | 255 | trans-aconitate 2-methyltransferase; Provisional | 99.57 | |
| PRK10258 | 251 | biotin biosynthesis protein BioC; Provisional | 99.45 | |
| TIGR02072 | 240 | BioC biotin biosynthesis protein BioC. This enzyme | 99.36 | |
| PLN02233 | 261 | ubiquinone biosynthesis methyltransferase | 99.14 | |
| COG4106 | 257 | Tam Trans-aconitate methyltransferase [General fun | 99.1 | |
| TIGR00740 | 239 | methyltransferase, putative. A simple BLAST search | 99.08 | |
| TIGR02752 | 231 | MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone me | 99.06 | |
| COG2226 | 238 | UbiE Methylase involved in ubiquinone/menaquinone | 99.02 | |
| PTZ00098 | 263 | phosphoethanolamine N-methyltransferase; Provision | 99.0 | |
| PLN02336 | 475 | phosphoethanolamine N-methyltransferase | 98.92 | |
| PLN02244 | 340 | tocopherol O-methyltransferase | 98.92 | |
| PRK11036 | 255 | putative S-adenosyl-L-methionine-dependent methylt | 98.9 | |
| PF01209 | 233 | Ubie_methyltran: ubiE/COQ5 methyltransferase famil | 98.89 | |
| PRK08317 | 241 | hypothetical protein; Provisional | 98.87 | |
| PRK15451 | 247 | tRNA cmo(5)U34 methyltransferase; Provisional | 98.86 | |
| PRK06202 | 232 | hypothetical protein; Provisional | 98.81 | |
| PRK15068 | 322 | tRNA mo(5)U34 methyltransferase; Provisional | 98.76 | |
| PLN02396 | 322 | hexaprenyldihydroxybenzoate methyltransferase | 98.74 | |
| PF08241 | 95 | Methyltransf_11: Methyltransferase domain; InterPr | 98.74 | |
| PF13489 | 161 | Methyltransf_23: Methyltransferase domain; PDB: 3J | 98.74 | |
| PRK11705 | 383 | cyclopropane fatty acyl phospholipid synthase; Pro | 98.71 | |
| PRK00216 | 239 | ubiE ubiquinone/menaquinone biosynthesis methyltra | 98.71 | |
| PLN02490 | 340 | MPBQ/MSBQ methyltransferase | 98.65 | |
| PRK11207 | 197 | tellurite resistance protein TehB; Provisional | 98.64 | |
| TIGR00452 | 314 | methyltransferase, putative. Known examples to dat | 98.61 | |
| TIGR01934 | 223 | MenG_MenH_UbiE ubiquinone/menaquinone biosynthesis | 98.6 | |
| smart00828 | 224 | PKS_MT Methyltransferase in polyketide synthase (P | 98.59 | |
| KOG2940 | 325 | consensus Predicted methyltransferase [General fun | 98.53 | |
| PRK11873 | 272 | arsM arsenite S-adenosylmethyltransferase; Reviewe | 98.52 | |
| PF08242 | 99 | Methyltransf_12: Methyltransferase domain; InterPr | 98.44 | |
| PRK12335 | 287 | tellurite resistance protein TehB; Provisional | 98.41 | |
| TIGR00477 | 195 | tehB tellurite resistance protein TehB. Part of a | 98.4 | |
| PRK00121 | 202 | trmB tRNA (guanine-N(7)-)-methyltransferase; Revie | 98.39 | |
| PRK05785 | 226 | hypothetical protein; Provisional | 98.39 | |
| TIGR02716 | 306 | C20_methyl_CrtF C-20 methyltransferase BchU. Membe | 98.37 | |
| PRK06922 | 677 | hypothetical protein; Provisional | 98.34 | |
| TIGR02021 | 219 | BchM-ChlM magnesium protoporphyrin O-methyltransfe | 98.34 | |
| PF13847 | 152 | Methyltransf_31: Methyltransferase domain; PDB: 3T | 98.32 | |
| TIGR02081 | 194 | metW methionine biosynthesis protein MetW. This pr | 98.26 | |
| PF02353 | 273 | CMAS: Mycolic acid cyclopropane synthetase; InterP | 98.24 | |
| PLN02336 | 475 | phosphoethanolamine N-methyltransferase | 98.24 | |
| PRK11088 | 272 | rrmA 23S rRNA methyltransferase A; Provisional | 98.23 | |
| PF12847 | 112 | Methyltransf_18: Methyltransferase domain; PDB: 3G | 98.21 | |
| KOG1540 | 296 | consensus Ubiquinone biosynthesis methyltransferas | 98.2 | |
| smart00138 | 264 | MeTrc Methyltransferase, chemotaxis proteins. Meth | 98.2 | |
| KOG3010 | 261 | consensus Methyltransferase [General function pred | 98.2 | |
| TIGR03438 | 301 | probable methyltransferase. This model represents | 98.2 | |
| TIGR01983 | 224 | UbiG ubiquinone biosynthesis O-methyltransferase. | 98.15 | |
| KOG1541 | 270 | consensus Predicted protein carboxyl methylase [Ge | 98.15 | |
| TIGR00138 | 181 | gidB 16S rRNA methyltransferase GidB. GidB (glucos | 98.12 | |
| PRK11188 | 209 | rrmJ 23S rRNA methyltransferase J; Provisional | 98.08 | |
| PRK07580 | 230 | Mg-protoporphyrin IX methyl transferase; Validated | 98.08 | |
| PF03848 | 192 | TehB: Tellurite resistance protein TehB; InterPro: | 98.06 | |
| COG2230 | 283 | Cfa Cyclopropane fatty acid synthase and related m | 98.05 | |
| PF08003 | 315 | Methyltransf_9: Protein of unknown function (DUF16 | 98.03 | |
| PF13649 | 101 | Methyltransf_25: Methyltransferase domain; PDB: 3B | 98.03 | |
| PRK05134 | 233 | bifunctional 3-demethylubiquinone-9 3-methyltransf | 98.02 | |
| TIGR03587 | 204 | Pse_Me-ase pseudaminic acid biosynthesis-associate | 97.98 | |
| KOG2361 | 264 | consensus Predicted methyltransferase [General fun | 97.94 | |
| TIGR00537 | 179 | hemK_rel_arch HemK-related putative methylase. The | 97.85 | |
| TIGR02469 | 124 | CbiT precorrin-6Y C5,15-methyltransferase (decarbo | 97.84 | |
| PRK09489 | 342 | rsmC 16S ribosomal RNA m2G1207 methyltransferase; | 97.79 | |
| PRK13944 | 205 | protein-L-isoaspartate O-methyltransferase; Provis | 97.79 | |
| TIGR00091 | 194 | tRNA (guanine-N(7)-)-methyltransferase. In E. coli | 97.78 | |
| PLN02585 | 315 | magnesium protoporphyrin IX methyltransferase | 97.77 | |
| KOG1270 | 282 | consensus Methyltransferases [Coenzyme transport a | 97.74 | |
| PF05401 | 201 | NodS: Nodulation protein S (NodS); InterPro: IPR00 | 97.71 | |
| TIGR03840 | 213 | TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d | 97.7 | |
| TIGR00080 | 215 | pimt protein-L-isoaspartate(D-aspartate) O-methylt | 97.67 | |
| TIGR03534 | 251 | RF_mod_PrmC protein-(glutamine-N5) methyltransfera | 97.66 | |
| PRK14121 | 390 | tRNA (guanine-N(7)-)-methyltransferase; Provisiona | 97.64 | |
| PRK15001 | 378 | SAM-dependent 23S ribosomal RNA mG1835 methyltrans | 97.62 | |
| PRK13942 | 212 | protein-L-isoaspartate O-methyltransferase; Provis | 97.62 | |
| PRK00312 | 212 | pcm protein-L-isoaspartate O-methyltransferase; Re | 97.61 | |
| PF05175 | 170 | MTS: Methyltransferase small domain; InterPro: IPR | 97.58 | |
| PRK14967 | 223 | putative methyltransferase; Provisional | 97.56 | |
| PRK08287 | 187 | cobalt-precorrin-6Y C(15)-methyltransferase; Valid | 97.54 | |
| PRK00107 | 187 | gidB 16S rRNA methyltransferase GidB; Reviewed | 97.51 | |
| PF00891 | 241 | Methyltransf_2: O-methyltransferase; InterPro: IPR | 97.5 | |
| PLN02232 | 160 | ubiquinone biosynthesis methyltransferase | 97.45 | |
| TIGR00438 | 188 | rrmJ cell division protein FtsJ. | 97.42 | |
| PF06080 | 204 | DUF938: Protein of unknown function (DUF938); Inte | 97.41 | |
| PRK13255 | 218 | thiopurine S-methyltransferase; Reviewed | 97.36 | |
| TIGR03533 | 284 | L3_gln_methyl protein-(glutamine-N5) methyltransfe | 97.34 | |
| PF03141 | 506 | Methyltransf_29: Putative S-adenosyl-L-methionine- | 97.33 | |
| PF07021 | 193 | MetW: Methionine biosynthesis protein MetW; InterP | 97.32 | |
| cd02440 | 107 | AdoMet_MTases S-adenosylmethionine-dependent methy | 97.32 | |
| PTZ00146 | 293 | fibrillarin; Provisional | 97.32 | |
| PF05148 | 219 | Methyltransf_8: Hypothetical methyltransferase; In | 97.28 | |
| PRK04266 | 226 | fibrillarin; Provisional | 97.26 | |
| COG4123 | 248 | Predicted O-methyltransferase [General function pr | 97.22 | |
| KOG3045 | 325 | consensus Predicted RNA methylase involved in rRNA | 97.15 | |
| COG2227 | 243 | UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4- | 97.14 | |
| PRK14903 | 431 | 16S rRNA methyltransferase B; Provisional | 97.1 | |
| PRK11805 | 307 | N5-glutamine S-adenosyl-L-methionine-dependent met | 97.08 | |
| PRK14904 | 445 | 16S rRNA methyltransferase B; Provisional | 97.02 | |
| TIGR00563 | 426 | rsmB ribosomal RNA small subunit methyltransferase | 97.01 | |
| PRK10901 | 427 | 16S rRNA methyltransferase B; Provisional | 96.99 | |
| PRK00811 | 283 | spermidine synthase; Provisional | 96.87 | |
| PHA03411 | 279 | putative methyltransferase; Provisional | 96.84 | |
| TIGR00536 | 284 | hemK_fam HemK family putative methylases. The gene | 96.84 | |
| PRK14902 | 444 | 16S rRNA methyltransferase B; Provisional | 96.82 | |
| KOG3178 | 342 | consensus Hydroxyindole-O-methyltransferase and re | 96.8 | |
| TIGR00406 | 288 | prmA ribosomal protein L11 methyltransferase. Ribo | 96.79 | |
| PRK14968 | 188 | putative methyltransferase; Provisional | 96.72 | |
| PF03291 | 331 | Pox_MCEL: mRNA capping enzyme; InterPro: IPR004971 | 96.7 | |
| PRK14966 | 423 | unknown domain/N5-glutamine S-adenosyl-L-methionin | 96.7 | |
| PRK09328 | 275 | N5-glutamine S-adenosyl-L-methionine-dependent met | 96.7 | |
| KOG1331 | 293 | consensus Predicted methyltransferase [General fun | 96.66 | |
| PRK00377 | 198 | cbiT cobalt-precorrin-6Y C(15)-methyltransferase; | 96.64 | |
| PLN03075 | 296 | nicotianamine synthase; Provisional | 96.64 | |
| PF13659 | 117 | Methyltransf_26: Methyltransferase domain; PDB: 3G | 96.62 | |
| PRK01544 | 506 | bifunctional N5-glutamine S-adenosyl-L-methionine- | 96.61 | |
| PF02390 | 195 | Methyltransf_4: Putative methyltransferase ; Inter | 96.52 | |
| TIGR01177 | 329 | conserved hypothetical protein TIGR01177. This fam | 96.49 | |
| PRK14901 | 434 | 16S rRNA methyltransferase B; Provisional | 96.47 | |
| COG2242 | 187 | CobL Precorrin-6B methylase 2 [Coenzyme metabolism | 96.44 | |
| PRK00517 | 250 | prmA ribosomal protein L11 methyltransferase; Revi | 96.41 | |
| KOG4300 | 252 | consensus Predicted methyltransferase [General fun | 96.39 | |
| TIGR00446 | 264 | nop2p NOL1/NOP2/sun family putative RNA methylase. | 96.39 | |
| COG2813 | 300 | RsmC 16S RNA G1207 methylase RsmC [Translation, ri | 96.36 | |
| TIGR00417 | 270 | speE spermidine synthase. the SpeE subunit of sper | 96.25 | |
| PF05891 | 218 | Methyltransf_PK: AdoMet dependent proline di-methy | 96.23 | |
| COG2264 | 300 | PrmA Ribosomal protein L11 methylase [Translation, | 96.21 | |
| PRK04457 | 262 | spermidine synthase; Provisional | 96.2 | |
| PRK13943 | 322 | protein-L-isoaspartate O-methyltransferase; Provis | 96.13 | |
| PLN02366 | 308 | spermidine synthase | 96.04 | |
| TIGR03704 | 251 | PrmC_rel_meth putative protein-(glutamine-N5) meth | 95.92 | |
| PF01135 | 209 | PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl | 95.86 | |
| KOG1975 | 389 | consensus mRNA cap methyltransferase [RNA processi | 95.86 | |
| COG2518 | 209 | Pcm Protein-L-isoaspartate carboxylmethyltransfera | 95.8 | |
| PRK07402 | 196 | precorrin-6B methylase; Provisional | 95.71 | |
| COG4976 | 287 | Predicted methyltransferase (contains TPR repeat) | 95.71 | |
| PRK01544 | 506 | bifunctional N5-glutamine S-adenosyl-L-methionine- | 95.56 | |
| PF06325 | 295 | PrmA: Ribosomal protein L11 methyltransferase (Prm | 95.42 | |
| PRK03612 | 521 | spermidine synthase; Provisional | 95.37 | |
| PF12147 | 311 | Methyltransf_20: Putative methyltransferase; Inter | 95.26 | |
| smart00650 | 169 | rADc Ribosomal RNA adenine dimethylases. | 95.23 | |
| COG2890 | 280 | HemK Methylase of polypeptide chain release factor | 95.14 | |
| PRK01581 | 374 | speE spermidine synthase; Validated | 94.84 | |
| PF01728 | 181 | FtsJ: FtsJ-like methyltransferase; InterPro: IPR00 | 94.3 | |
| TIGR03439 | 319 | methyl_EasF probable methyltransferase domain, Eas | 94.23 | |
| PRK13256 | 226 | thiopurine S-methyltransferase; Reviewed | 93.67 | |
| PF05724 | 218 | TPMT: Thiopurine S-methyltransferase (TPMT); Inter | 93.6 | |
| PLN02672 | 1082 | methionine S-methyltransferase | 93.41 | |
| PRK13168 | 443 | rumA 23S rRNA m(5)U1939 methyltransferase; Reviewe | 93.37 | |
| KOG3191 | 209 | consensus Predicted N6-DNA-methyltransferase [Tran | 93.11 | |
| KOG1499 | 346 | consensus Protein arginine N-methyltransferase PRM | 93.09 | |
| COG0220 | 227 | Predicted S-adenosylmethionine-dependent methyltra | 93.05 | |
| PF11968 | 219 | DUF3321: Putative methyltransferase (DUF3321); Int | 92.82 | |
| PLN02781 | 234 | Probable caffeoyl-CoA O-methyltransferase | 92.56 | |
| KOG1500 | 517 | consensus Protein arginine N-methyltransferase CAR | 92.49 | |
| PRK00274 | 272 | ksgA 16S ribosomal RNA methyltransferase KsgA/Dim1 | 92.37 | |
| PRK10611 | 287 | chemotaxis methyltransferase CheR; Provisional | 92.16 | |
| COG1352 | 268 | CheR Methylase of chemotaxis methyl-accepting prot | 91.98 | |
| PF10294 | 173 | Methyltransf_16: Putative methyltransferase; Inter | 91.76 | |
| PF13679 | 141 | Methyltransf_32: Methyltransferase domain | 91.48 | |
| KOG2899 | 288 | consensus Predicted methyltransferase [General fun | 91.47 | |
| KOG2904 | 328 | consensus Predicted methyltransferase [General fun | 91.42 | |
| PHA03412 | 241 | putative methyltransferase; Provisional | 91.32 | |
| PF01739 | 196 | CheR: CheR methyltransferase, SAM binding domain; | 91.28 | |
| PRK14896 | 258 | ksgA 16S ribosomal RNA methyltransferase KsgA/Dim1 | 91.1 | |
| PRK11783 | 702 | rlmL 23S rRNA m(2)G2445 methyltransferase; Provisi | 90.47 | |
| PRK15128 | 396 | 23S rRNA m(5)C1962 methyltransferase; Provisional | 88.83 | |
| PRK11933 | 470 | yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF; | 88.77 | |
| PF05219 | 265 | DREV: DREV methyltransferase; InterPro: IPR007884 | 86.87 | |
| PLN02823 | 336 | spermine synthase | 86.72 | |
| TIGR00755 | 253 | ksgA dimethyladenosine transferase. Alternate name | 86.51 | |
| PRK11727 | 321 | 23S rRNA mA1618 methyltransferase; Provisional | 86.18 | |
| TIGR00478 | 228 | tly hemolysin TlyA family protein. Hemolysins are | 85.64 | |
| COG2519 | 256 | GCD14 tRNA(1-methyladenosine) methyltransferase an | 85.39 | |
| PF09243 | 274 | Rsm22: Mitochondrial small ribosomal subunit Rsm22 | 85.3 | |
| PRK03522 | 315 | rumB 23S rRNA methyluridine methyltransferase; Rev | 84.89 | |
| PF07942 | 270 | N2227: N2227-like protein; InterPro: IPR012901 Thi | 84.66 | |
| COG2263 | 198 | Predicted RNA methylase [Translation, ribosomal st | 84.0 | |
| PTZ00338 | 294 | dimethyladenosine transferase-like protein; Provis | 82.28 | |
| PF01234 | 256 | NNMT_PNMT_TEMT: NNMT/PNMT/TEMT family; InterPro: I | 81.62 |
| >PLN02668 indole-3-acetate carboxyl methyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-100 Score=748.73 Aligned_cols=360 Identities=34% Similarity=0.571 Sum_probs=327.1
Q ss_pred CCccceeccCCCCCcchHHHhhHHHHHHHHHHHHHHHHHHHHhhhhcCC-CceEEEeecCCCCcchHHHHHHHHHHHHHH
Q 017747 1 MDVEKLFHMAGGTGPTSYARNSSLQKKASDTVKHITLEALQQLYLEIDP-KTINIADLGCSSGPNTLAIIKDFVQTVEMT 79 (366)
Q Consensus 1 ~~~~~~l~M~gg~g~~sY~~nS~~Q~~~~~~~~~~l~~ai~~l~~~~~~-~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~ 79 (366)
|+++++|||+||+|++||++||.+|+.++..++|+|+++|++++....+ ++++|||||||+|+||+.+|+.||++|+++
T Consensus 13 m~~~~~l~M~gG~g~~SYa~nS~~Q~~~~~~~k~~leeai~~~~~~~~p~~~~~iaDlGcs~G~ntl~~vs~iI~~i~~~ 92 (386)
T PLN02668 13 MKLEKLLCMKGGKGEGSYANNSQAQALHARSMLHLLEETLDNVHLNSSPEVPFTAVDLGCSSGSNTIHIIDVIVKHMSKR 92 (386)
T ss_pred ceeccccccCCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcceeEEEecCCCCccHHHHHHHHHHHHHHH
Confidence 7899999999999999999999999999999999999999988654334 689999999999999999999999999999
Q ss_pred hhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHH--hhhc--CCCCCCceEEeccCCCcccccCCCCcccEEEccc
Q 017747 80 SREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQL--RNER--GGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSN 155 (366)
Q Consensus 80 ~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~--~~~~--~~~~~~~~f~~~vpgSFy~~lfp~~s~~~~~S~~ 155 (366)
|.+. +.++|++||||||||+||||+||++|+.+.+.+ ..+. ..+ .++||++|||||||+||||++|+||+||++
T Consensus 93 ~~~~-~~~~pe~qv~~nDLP~NDFNtlF~~L~~~~~~~~~~~~~~~~~~-~~~~f~~gvpGSFY~RLfP~~Slh~~~Ss~ 170 (386)
T PLN02668 93 YESA-GLDPPEFSAFFSDLPSNDFNTLFQLLPPLANYGGSMEECLAASG-HRSYFAAGVPGSFYRRLFPARSIDVFHSAF 170 (386)
T ss_pred hhhc-CCCCCcceEEecCCCCCCHHHHHhhchhhhhhhcchhhhccccC-CCceEEEecCccccccccCCCceEEEEeec
Confidence 9874 556789999999999999999999999765532 1110 011 246999999999999999999999999999
Q ss_pred ccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEEEeecCCCCCCCCCC
Q 017747 156 SLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRG 235 (366)
Q Consensus 156 alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~ 235 (366)
||||||++|+.+.++.++.||||+||++.++ +.|.+||++||++||++||++|++||+|||+||++++||++.+++.++
T Consensus 171 slHWLS~vP~~l~d~~s~~~Nkg~iyi~~~s-~~v~~aY~~Qf~~D~~~FL~~Ra~ELvpGG~mvl~~~Gr~~~~~~~~~ 249 (386)
T PLN02668 171 SLHWLSQVPESVTDKRSAAYNKGRVFIHGAS-ESTANAYKRQFQADLAGFLRARAQEMKRGGAMFLVCLGRTSVDPTDQG 249 (386)
T ss_pred cceecccCchhhccCCcccccCCceEecCCC-HHHHHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEEecCCCCCcccCC
Confidence 9999999999999999999999999999888 779999999999999999999999999999999999999987777665
Q ss_pred -chhHHHH-HHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEeeEEEEeeccCCCC----cccchhh
Q 017747 236 -NSFFWEL-LSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLDMFQVERQGHD----RGESYGS 309 (366)
Q Consensus 236 -~~~~~~~-l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~~~e~~~~~~~~~~----d~~~~~~ 309 (366)
.+.+|+. +.++|++||.||+|++||+|+||+|+|+||++|++++|+++|+|+|+++|.++..|++.. |....+.
T Consensus 250 ~~~~~~~~~l~~al~dlv~eGlI~eek~dsFniP~Y~ps~eEv~~~Ie~~gsF~I~~le~~~~~~~~~~~~~~d~~~~g~ 329 (386)
T PLN02668 250 GAGLLFGTHFQDAWDDLVQEGLVTSEKRDSFNIPVYAPSLQDFKEVVEANGSFAIDKLEVFKGGSPLVVNEPDDAAEVGR 329 (386)
T ss_pred chhHHHHHHHHHHHHHHHHcCCCCHHHHhcccCcccCCCHHHHHHHHhhcCCEEeeeeEEeeccCcccccCcccHHHHHH
Confidence 5667877 999999999999999999999999999999999999999999999999999998886533 3345678
Q ss_pred hHhhhHHHhhhhHHHhhcCCCcchHHHHHHHHHHHHHHHHHh--cCCCcEEEEEEEee
Q 017747 310 AVARTVRAIQESTIIHHFGIGEGVLDNLFEIYGRLVDEEMAK--EEIKPLTFVLLLRK 365 (366)
Q Consensus 310 ~~~~~~Ra~~e~~l~~~~g~~~~i~d~lf~r~~~~~~~~~~~--~~~~~~~~~~~l~k 365 (366)
.+++++||++||+|.+||| ++++|+||+||+++++++++. ++..+.+++++|+-
T Consensus 330 ~~a~~~RA~~E~ll~~HFG--~~i~D~lF~r~~~~v~~~~~~~~~~~~~~~~~~sL~~ 385 (386)
T PLN02668 330 AMANSCRSVAGVLVDAHIG--EELSNELFLRVERRATSHAKELLEKLQFFHIVASLSF 385 (386)
T ss_pred HHHHHHHHHHHHHHHHHcC--HHHHHHHHHHHHHHHHHHHHhhcccCceEEEEEEEec
Confidence 8999999999999999999 999999999999999999998 88999999999973
|
|
| >PF03492 Methyltransf_7: SAM dependent carboxyl methyltransferase; InterPro: IPR005299 This family of plant methyltransferases contains enzymes that act on a variety of substrates including salicylic acid, jasmonic acid and 7-Methylxanthine | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-92 Score=689.97 Aligned_cols=322 Identities=44% Similarity=0.813 Sum_probs=276.6
Q ss_pred HHHHHHHhhh-hcCCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhc-CCCCcceEEecCCCCCchhHHHhhCchh
Q 017747 36 TLEALQQLYL-EIDPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQ-NPAPEFHFYLNDLPTNDFNSVFKALPDF 113 (366)
Q Consensus 36 l~~ai~~l~~-~~~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~-~~~p~~~v~~nDLp~NDFn~lf~~l~~~ 113 (366)
||+||.+++. ...+++++|||||||+|+||+.+|+.||++|+++|... + .++|++||||||||+||||+||++|+.+
T Consensus 1 ~~~ai~~~~~~~~~~~~~~iaD~GcS~G~Nsl~~~~~ii~~i~~~~~~~-~~~~~~e~~v~~nDlP~NDFn~lF~~l~~~ 79 (334)
T PF03492_consen 1 LEEAIKELYNSSNNPKPFRIADLGCSSGPNSLLAVSNIIDAIRERCRSS-NNQPPPEFQVFFNDLPSNDFNTLFKSLPSF 79 (334)
T ss_dssp -HHHHHHHHHSTTTTTEEEEEEES--SSHHHHHHHHHHHHHHHHHHHCT-T-SS--EEEEEEEE-TTS-HHHHHHCHHHH
T ss_pred ChHHHHHHHhcCCCCCceEEEecCCCCCccHHHHHHHHHHHHHHHhhhh-cCCCCCeEEEEeCCCCCccHHHHHHhChhh
Confidence 5889998876 34778999999999999999999999999999998765 3 5788999999999999999999999998
Q ss_pred HHHHhhhcCCCCCCceEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHH
Q 017747 114 HRQLRNERGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKA 193 (366)
Q Consensus 114 ~~~~~~~~~~~~~~~~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~a 193 (366)
.+++.. .++||++|||||||+||||++|+||+||++||||||++|+.+.++.+++||||+||++.+++++|.+|
T Consensus 80 ~~~~~~------~~~~f~~gvpgSFy~rLfP~~Svh~~~Ss~alHWLS~vP~~l~~~~~~~~Nkg~i~~~~~~~~~v~~a 153 (334)
T PF03492_consen 80 QQSLKK------FRNYFVSGVPGSFYGRLFPSNSVHFGHSSYALHWLSQVPEELVDKSSPAWNKGNIYISRTSPPEVAKA 153 (334)
T ss_dssp HHHHHH------TTSEEEEEEES-TTS--S-TT-EEEEEEES-TTB-SSS-CCCCTTTSTTTSTTTSSSSTTS-HHHHHH
T ss_pred hhccCC------CceEEEEecCchhhhccCCCCceEEEEEechhhhcccCCcccccccccccccCcEEEecCCCHHHHHH
Confidence 887765 56999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCH
Q 017747 194 YFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSK 273 (366)
Q Consensus 194 y~~Q~~~D~~~FL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~ 273 (366)
|++||++||++||++||+||+|||+|||+++||++.++...+.+.+|++++++|++||.||+|++|++|+||+|+|+||+
T Consensus 154 y~~Qf~~D~~~FL~~Ra~ELv~GG~mvl~~~gr~~~~~~~~~~~~~~~~l~~~l~dMv~eGlI~~ek~dsfniP~Y~ps~ 233 (334)
T PF03492_consen 154 YAKQFQKDFSSFLKARAEELVPGGRMVLTFLGRDEEDPSSTGSCMLWDLLADALRDMVAEGLISEEKVDSFNIPIYFPSP 233 (334)
T ss_dssp HHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEE-STSSTTSTTCCCHHHHHHHHHHHHHHTTSS-HCCCCTG--SBB---H
T ss_pred HHHHHHHHHHHHHHHhhheeccCcEEEEEEeeccccccccCCcchHHHHHHHHHHHHHHcCCcCHHHhhceeCCccCCCH
Confidence 99999999999999999999999999999999999877777667899999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCceEEeeEEEEeeccCCC-------CcccchhhhHhhhHHHhhhhHHHhhcCCCcchHHHHHHHHHHHHH
Q 017747 274 EEIEGEVGREGSFKLDQLDMFQVERQGH-------DRGESYGSAVARTVRAIQESTIIHHFGIGEGVLDNLFEIYGRLVD 346 (366)
Q Consensus 274 eEv~~~i~~~gsf~i~~~e~~~~~~~~~-------~d~~~~~~~~~~~~Ra~~e~~l~~~~g~~~~i~d~lf~r~~~~~~ 346 (366)
+||+++|+++|+|+|+++|.++.+|... +|...+|+.+++++|||+||+|++||| ++++|+||+||+++++
T Consensus 234 eEv~~~I~~~gsF~I~~le~~~~~~~~~~~~~~~~~d~~~~~~~~~~~iRA~~e~~l~~hfG--~ei~D~LF~r~~~~v~ 311 (334)
T PF03492_consen 234 EEVRAIIEEEGSFEIEKLELFEQPWWSVPDDESWKEDAKEYARNVANYIRAVFEPLLKAHFG--EEIMDELFERYAKKVA 311 (334)
T ss_dssp HHHHHHHHHHTSEEEEEEEEEEEETCCTCTTT-STTTHHCHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCEEEEEEEEEeecccccchhhhcccchhhhHHHHHHhHHHHHHHHHHHHhC--hHHHHHHHHHHHHHHH
Confidence 9999999999999999999998654332 123579999999999999999999999 9999999999999999
Q ss_pred HHHHhcC---CCcEEEEEEEeeC
Q 017747 347 EEMAKEE---IKPLTFVLLLRKL 366 (366)
Q Consensus 347 ~~~~~~~---~~~~~~~~~l~k~ 366 (366)
++++.++ +++++++++|+||
T Consensus 312 ~~~~~~~~~~~~~~~i~~~L~Rk 334 (334)
T PF03492_consen 312 EHLEKEKSRNMKFVNIVVSLTRK 334 (334)
T ss_dssp HHHHHTHTT-BEEEEEEEEEEE-
T ss_pred HHHHHhhccCCCcEEEEEEEeeC
Confidence 9998776 8899999999997
|
Caffeine is synthesized through sequential three-step methylation of xanthine derivatives at positions 7-N, 3-N, and 1-N. The protein 7-methylxanthine methyltransferase (designated as CaMXMT) catalyses the second step to produce theobromine [].; GO: 0008168 methyltransferase activity; PDB: 2EFJ_A 1M6E_X 2EG5_C 3B5I_B. |
| >PRK01683 trans-aconitate 2-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=8.6e-14 Score=131.39 Aligned_cols=250 Identities=13% Similarity=0.161 Sum_probs=151.3
Q ss_pred cCCCCCcchHHHhhHHHHHHHHHHHHHHHHHHHHhhhhcCCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCC
Q 017747 9 MAGGTGPTSYARNSSLQKKASDTVKHITLEALQQLYLEIDPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPA 88 (366)
Q Consensus 9 M~gg~g~~sY~~nS~~Q~~~~~~~~~~l~~ai~~l~~~~~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~ 88 (366)
|..++ +..|++++..|.+....++..+. .....+|+|+|||+|..+..+ .++ .
T Consensus 1 ~~~w~-~~~Y~~~~~~~~~~~~~ll~~~~----------~~~~~~vLDiGcG~G~~~~~l--------a~~--------~ 53 (258)
T PRK01683 1 MSDWN-PSLYLKFEDERTRPARDLLARVP----------LENPRYVVDLGCGPGNSTELL--------VER--------W 53 (258)
T ss_pred CCCCC-HHHHHHHHHHhhcHHHHHHhhCC----------CcCCCEEEEEcccCCHHHHHH--------HHH--------C
Confidence 55555 45899999998877665543321 134589999999999998642 222 2
Q ss_pred CcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceEEeccCCCcccccCCCCcccEEEcccccccccCCCCccc
Q 017747 89 PEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLY 168 (366)
Q Consensus 89 p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~ 168 (366)
|..+|+..|+........-+.++ ..-|.. +++ ..+.|++++|+++|+.++||+.+.
T Consensus 54 ~~~~v~gvD~s~~~i~~a~~~~~---------------~~~~~~---~d~-~~~~~~~~fD~v~~~~~l~~~~d~----- 109 (258)
T PRK01683 54 PAARITGIDSSPAMLAEARSRLP---------------DCQFVE---ADI-ASWQPPQALDLIFANASLQWLPDH----- 109 (258)
T ss_pred CCCEEEEEECCHHHHHHHHHhCC---------------CCeEEE---Cch-hccCCCCCccEEEEccChhhCCCH-----
Confidence 34789999987543322221111 112333 344 345677899999999999997541
Q ss_pred ccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHH
Q 017747 169 NEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLA 248 (366)
Q Consensus 169 ~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~ 248 (366)
..+|+.-.+.|+|||.+++++.+.... ..+ ..++
T Consensus 110 ----------------------------------~~~l~~~~~~LkpgG~~~~~~~~~~~~--------~~~----~~~~ 143 (258)
T PRK01683 110 ----------------------------------LELFPRLVSLLAPGGVLAVQMPDNLDE--------PSH----VLMR 143 (258)
T ss_pred ----------------------------------HHHHHHHHHhcCCCcEEEEECCCCCCC--------HHH----HHHH
Confidence 123556688999999999986432211 111 1222
Q ss_pred HHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEeeEEEEeeccCCCCcccchhhhHhhhHHHhh-hhHHHhhc
Q 017747 249 ILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLDMFQVERQGHDRGESYGSAVARTVRAIQ-ESTIIHHF 327 (366)
Q Consensus 249 ~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~~~e~~~~~~~~~~d~~~~~~~~~~~~Ra~~-e~~l~~~~ 327 (366)
++.........-...-..+.++++++++...+.+.| +.+...+... . .+.. ..+.+..|+++.. .+++ .++
T Consensus 144 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~~~g-~~v~~~~~~~-~-~~~~----~~~~~~~~~~~~~~~~~~-~~l 215 (258)
T PRK01683 144 EVAENGPWEQNLPDRGARRAPLPPPHAYYDALAPAA-CRVDIWHTTY-Y-HPMP----SAQAIVEWVKGTGLRPFL-DPL 215 (258)
T ss_pred HHHccCchHHHhccccccCcCCCCHHHHHHHHHhCC-Cceeeeeeee-e-eecC----CchhhhhhhhhccHHHHH-hhC
Confidence 222111111111111123457789999999999998 6554433321 1 1221 1356777888754 6666 678
Q ss_pred CCCcchHHHHHHHHHHHHHHHHH-hc-C---CCcEEEEEEEee
Q 017747 328 GIGEGVLDNLFEIYGRLVDEEMA-KE-E---IKPLTFVLLLRK 365 (366)
Q Consensus 328 g~~~~i~d~lf~r~~~~~~~~~~-~~-~---~~~~~~~~~l~k 365 (366)
+ ++..+++.++|.+.+.+... .. + ..|.-+++..+|
T Consensus 216 ~--~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 256 (258)
T PRK01683 216 T--ESEQAAFLAAYLARIAEAYPLQADGKVLLAFPRLFIVARR 256 (258)
T ss_pred C--HHHHHHHHHHHHHHHHHHCCCCCCCcEEcccceEEEEEEe
Confidence 8 88999999999999988753 22 2 555556666655
|
|
| >PRK14103 trans-aconitate 2-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=5.6e-14 Score=132.78 Aligned_cols=226 Identities=14% Similarity=0.140 Sum_probs=141.3
Q ss_pred cchHHHhhHHHHHHHHHHHHHHHHHHHHhhhhcCCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEE
Q 017747 15 PTSYARNSSLQKKASDTVKHITLEALQQLYLEIDPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFY 94 (366)
Q Consensus 15 ~~sY~~nS~~Q~~~~~~~~~~l~~ai~~l~~~~~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~ 94 (366)
...|.+++..|.+.+..++..+.. ....+|+|+|||+|..+.. +.++ .|..+|+
T Consensus 4 ~~~y~~~~~~~~~~~~~ll~~l~~----------~~~~~vLDlGcG~G~~~~~--------l~~~--------~p~~~v~ 57 (255)
T PRK14103 4 PDVYLAFADHRGRPFYDLLARVGA----------ERARRVVDLGCGPGNLTRY--------LARR--------WPGAVIE 57 (255)
T ss_pred HHHHHHHHhHhhCHHHHHHHhCCC----------CCCCEEEEEcCCCCHHHHH--------HHHH--------CCCCEEE
Confidence 458999999998777655443321 3468999999999988763 3232 2347899
Q ss_pred ecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCC
Q 017747 95 LNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGES 174 (366)
Q Consensus 95 ~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~ 174 (366)
..|+..+..... .. .+--|.. +++ +.+.|++++|+++|+.++||+.+.+
T Consensus 58 gvD~s~~~~~~a-----------~~------~~~~~~~---~d~-~~~~~~~~fD~v~~~~~l~~~~d~~---------- 106 (255)
T PRK14103 58 ALDSSPEMVAAA-----------RE------RGVDART---GDV-RDWKPKPDTDVVVSNAALQWVPEHA---------- 106 (255)
T ss_pred EEECCHHHHHHH-----------Hh------cCCcEEE---cCh-hhCCCCCCceEEEEehhhhhCCCHH----------
Confidence 999865322111 01 0111333 455 4566788999999999999975421
Q ss_pred CccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHH--HHHHHHHH
Q 017747 175 INKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLS--RSLAILVS 252 (366)
Q Consensus 175 ~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~--~al~~mv~ 252 (366)
.+|+.-.+.|+|||++++++.+.... + ...+...+. ..|.....
T Consensus 107 -----------------------------~~l~~~~~~LkpgG~l~~~~~~~~~~-~----~~~~~~~~~~~~~w~~~~~ 152 (255)
T PRK14103 107 -----------------------------DLLVRWVDELAPGSWIAVQVPGNFDA-P----SHAAVRALARREPWAKLLR 152 (255)
T ss_pred -----------------------------HHHHHHHHhCCCCcEEEEEcCCCcCC-h----hHHHHHHHhccCchhHHhc
Confidence 12344578899999999987653211 0 000111111 12322210
Q ss_pred cCccchhhhcccCccccCCCHHHHHHHHhhcCceEEeeEEEEeeccCCCCcccchhhhHhhhHHHh-hhhHHHhhcCCCc
Q 017747 253 QGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLDMFQVERQGHDRGESYGSAVARTVRAI-QESTIIHHFGIGE 331 (366)
Q Consensus 253 eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~~~e~~~~~~~~~~d~~~~~~~~~~~~Ra~-~e~~l~~~~g~~~ 331 (366)
-..+..+..+.+++++.+.+++.| |++...+..... +.. ..+.+..|+++. +.+++ +.++ +
T Consensus 153 --------~~~~~~~~~~~~~~~~~~~l~~aG-f~v~~~~~~~~~--~~~----~~~~~~~~~~~~~~~~~~-~~l~--~ 214 (255)
T PRK14103 153 --------DIPFRVGAVVQTPAGYAELLTDAG-CKVDAWETTYVH--QLT----GEDPVLDWITGTALRPVR-ERLS--D 214 (255)
T ss_pred --------ccccccCcCCCCHHHHHHHHHhCC-CeEEEEeeeeee--eCC----Cchhhhhhhhccchhhhh-hhCC--H
Confidence 012334556789999999999999 987655542211 111 134577777755 35666 4688 8
Q ss_pred chHHHHHHHHHHHHHHHH
Q 017747 332 GVLDNLFEIYGRLVDEEM 349 (366)
Q Consensus 332 ~i~d~lf~r~~~~~~~~~ 349 (366)
+.++++.+.+.+.+++.+
T Consensus 215 ~~~~~~~~~~~~~l~~~~ 232 (255)
T PRK14103 215 DSWEQFRAELIPLLREAY 232 (255)
T ss_pred HHHHHHHHHHHHHHHHHC
Confidence 888999999999988875
|
|
| >PRK10258 biotin biosynthesis protein BioC; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.5e-12 Score=121.06 Aligned_cols=192 Identities=14% Similarity=0.182 Sum_probs=123.5
Q ss_pred cchHHHhhHHHHHHHHHHHHHHHHHHHHhhhhcCCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEE
Q 017747 15 PTSYARNSSLQKKASDTVKHITLEALQQLYLEIDPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFY 94 (366)
Q Consensus 15 ~~sY~~nS~~Q~~~~~~~~~~l~~ai~~l~~~~~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~ 94 (366)
..+|++++.+|+.+...++..+.. ...-+|+|+|||+|.++.. +.+. ..+++
T Consensus 17 a~~Y~~~~~~q~~~a~~l~~~l~~----------~~~~~vLDiGcG~G~~~~~--------l~~~----------~~~v~ 68 (251)
T PRK10258 17 AAHYEQHAELQRQSADALLAMLPQ----------RKFTHVLDAGCGPGWMSRY--------WRER----------GSQVT 68 (251)
T ss_pred HHhHhHHHHHHHHHHHHHHHhcCc----------cCCCeEEEeeCCCCHHHHH--------HHHc----------CCeEE
Confidence 458999999999998887765542 2357899999999988754 2221 26789
Q ss_pred ecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCC
Q 017747 95 LNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGES 174 (366)
Q Consensus 95 ~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~ 174 (366)
..|+....-...-+.. ....|+. +++..-.+|++++|+++|+.++||+.+.+
T Consensus 69 ~~D~s~~~l~~a~~~~---------------~~~~~~~---~d~~~~~~~~~~fD~V~s~~~l~~~~d~~---------- 120 (251)
T PRK10258 69 ALDLSPPMLAQARQKD---------------AADHYLA---GDIESLPLATATFDLAWSNLAVQWCGNLS---------- 120 (251)
T ss_pred EEECCHHHHHHHHhhC---------------CCCCEEE---cCcccCcCCCCcEEEEEECchhhhcCCHH----------
Confidence 9998653222111111 0112333 35544457889999999999999976532
Q ss_pred CccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcC
Q 017747 175 INKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQG 254 (366)
Q Consensus 175 ~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG 254 (366)
.+|+.-.+-|+|||.++++.++.++ +.+ +.++|..+ +
T Consensus 121 -----------------------------~~l~~~~~~Lk~gG~l~~~~~~~~~----------~~e-l~~~~~~~--~- 157 (251)
T PRK10258 121 -----------------------------TALRELYRVVRPGGVVAFTTLVQGS----------LPE-LHQAWQAV--D- 157 (251)
T ss_pred -----------------------------HHHHHHHHHcCCCeEEEEEeCCCCc----------hHH-HHHHHHHh--c-
Confidence 2245557899999999999988764 222 55666543 1
Q ss_pred ccchhhhcccCccccCCCHHHHHHHHhhcCceEEeeEEEEeeccCCCCcccchhhhHhhhHHHhhhhH
Q 017747 255 EIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLDMFQVERQGHDRGESYGSAVARTVRAIQEST 322 (366)
Q Consensus 255 ~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~~~e~~~~~~~~~~d~~~~~~~~~~~~Ra~~e~~ 322 (366)
......-+++.+|+.+.+...+ +++ ..+.+...+ + .+..+...+|..-...
T Consensus 158 --------~~~~~~~~~~~~~l~~~l~~~~-~~~-~~~~~~~~f-~------~~~~~l~~lk~~G~~~ 208 (251)
T PRK10258 158 --------ERPHANRFLPPDAIEQALNGWR-YQH-HIQPITLWF-D------DALSAMRSLKGIGATH 208 (251)
T ss_pred --------cCCccccCCCHHHHHHHHHhCC-cee-eeeEEEEEC-C------CHHHHHHHHHHhCCCC
Confidence 1123445788999999998766 544 344444443 1 2345666666665443
|
|
| >TIGR02072 BioC biotin biosynthesis protein BioC | Back alignment and domain information |
|---|
Probab=99.36 E-value=6.1e-12 Score=116.00 Aligned_cols=216 Identities=19% Similarity=0.243 Sum_probs=133.3
Q ss_pred CcchHHHhhHHHHHHHHHHHHHHHHHHHHhhhhcCCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceE
Q 017747 14 GPTSYARNSSLQKKASDTVKHITLEALQQLYLEIDPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHF 93 (366)
Q Consensus 14 g~~sY~~nS~~Q~~~~~~~~~~l~~ai~~l~~~~~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v 93 (366)
...+|++.+..|+.+...+.+.+.... ...+.+|+|+|||+|..+.. +.+. .|..++
T Consensus 5 ~~~~y~~~~~~q~~~~~~l~~~~~~~~-------~~~~~~vLDlG~G~G~~~~~--------l~~~--------~~~~~~ 61 (240)
T TIGR02072 5 AAKTYDRHAKIQREMAKRLLALLKEKG-------IFIPASVLDIGCGTGYLTRA--------LLKR--------FPQAEF 61 (240)
T ss_pred hhhchhHHHHHHHHHHHHHHHHhhhhc-------cCCCCeEEEECCCccHHHHH--------HHHh--------CCCCcE
Confidence 356899999999999988888777531 13458899999999998764 2222 234778
Q ss_pred EecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccC
Q 017747 94 YLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGE 173 (366)
Q Consensus 94 ~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~ 173 (366)
+..|+.....+...+.++ .+-.|+. +++.+..+|++++|+++++.++||+...
T Consensus 62 ~~~D~~~~~~~~~~~~~~--------------~~~~~~~---~d~~~~~~~~~~fD~vi~~~~l~~~~~~---------- 114 (240)
T TIGR02072 62 IALDISAGMLAQAKTKLS--------------ENVQFIC---GDAEKLPLEDSSFDLIVSNLALQWCDDL---------- 114 (240)
T ss_pred EEEeChHHHHHHHHHhcC--------------CCCeEEe---cchhhCCCCCCceeEEEEhhhhhhccCH----------
Confidence 999987654433333222 1112333 4665666789999999999999997441
Q ss_pred CCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHc
Q 017747 174 SINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQ 253 (366)
Q Consensus 174 ~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~e 253 (366)
..+|....+-|+|||.+++..++..+ +.+ +...+..
T Consensus 115 -----------------------------~~~l~~~~~~L~~~G~l~~~~~~~~~----------~~~-~~~~~~~---- 150 (240)
T TIGR02072 115 -----------------------------SQALSELARVLKPGGLLAFSTFGPGT----------LHE-LRQSFGQ---- 150 (240)
T ss_pred -----------------------------HHHHHHHHHHcCCCcEEEEEeCCccC----------HHH-HHHHHHH----
Confidence 23466778999999999998765543 111 2222221
Q ss_pred CccchhhhcccCccccCCCHHHHHHHHhhcCceEEeeEEEEeeccCCCCcccchhhhHhhhHHHhhhhHHHh-hcCCCcc
Q 017747 254 GEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLDMFQVERQGHDRGESYGSAVARTVRAIQESTIIH-HFGIGEG 332 (366)
Q Consensus 254 G~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~~~e~~~~~~~~~~d~~~~~~~~~~~~Ra~~e~~l~~-~~g~~~~ 332 (366)
....+++.+++.+.+++. |+...++...... .+. ....+..++|......... .++ .+
T Consensus 151 ------------~~~~~~~~~~~~~~l~~~--f~~~~~~~~~~~~-~~~----~~~~~~~~l~~~g~~~~~~~~~~--~~ 209 (240)
T TIGR02072 151 ------------HGLRYLSLDELKALLKNS--FELLTLEEELITL-SFD----DPLDVLRHLKKTGANGLSSGRTS--RK 209 (240)
T ss_pred ------------hccCCCCHHHHHHHHHHh--cCCcEEEEEEEEE-eCC----CHHHHHHHHHHhccCcCCCCCCC--HH
Confidence 123467899999999875 7665555433221 111 1345666777655433321 133 44
Q ss_pred hHHHHHHHHHHH
Q 017747 333 VLDNLFEIYGRL 344 (366)
Q Consensus 333 i~d~lf~r~~~~ 344 (366)
...++.+.|.+.
T Consensus 210 ~~~~~~~~~~~~ 221 (240)
T TIGR02072 210 QLKAFLERYEQE 221 (240)
T ss_pred HHHHHHHHHHHh
Confidence 444444444333
|
This enzyme, which is found in biotin biosynthetic gene clusters in proteobacteria, firmicutes, green-sulfur bacteria, fusobacterium and bacteroides, is believed to carry out an enzymatic step prior to the formation of pimeloyl-CoA (although attribution of this annotation is not traceable). The enzyme appears related to methyltransferases by homology. |
| >PLN02233 ubiquinone biosynthesis methyltransferase | Back alignment and domain information |
|---|
Probab=99.14 E-value=5.7e-10 Score=106.20 Aligned_cols=170 Identities=12% Similarity=0.088 Sum_probs=97.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+.. +.++. .|..+|+..|+..++-...-+..+.. .. +. ..++
T Consensus 73 ~~~~VLDlGcGtG~~~~~--------la~~~-------~~~~~V~gvD~S~~ml~~A~~r~~~~-----~~-~~--~~~i 129 (261)
T PLN02233 73 MGDRVLDLCCGSGDLAFL--------LSEKV-------GSDGKVMGLDFSSEQLAVAASRQELK-----AK-SC--YKNI 129 (261)
T ss_pred CCCEEEEECCcCCHHHHH--------HHHHh-------CCCCEEEEEECCHHHHHHHHHHhhhh-----hh-cc--CCCe
Confidence 457999999999998764 22221 23468999999876554443222100 00 00 1122
Q ss_pred -EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
|+. ++..+-.+|++|+|++++++++||+.+.. .+|+.
T Consensus 130 ~~~~---~d~~~lp~~~~sfD~V~~~~~l~~~~d~~---------------------------------------~~l~e 167 (261)
T PLN02233 130 EWIE---GDATDLPFDDCYFDAITMGYGLRNVVDRL---------------------------------------KAMQE 167 (261)
T ss_pred EEEE---cccccCCCCCCCEeEEEEecccccCCCHH---------------------------------------HHHHH
Confidence 444 35544458999999999999999975421 23556
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHHHHH-HHHHHHHH-HcCccchhhhccc-CccccCCCHHHHHHHHhhcCc
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELL-SRSLAILV-SQGEIEKEKLVAY-HAHFYAPSKEEIEGEVGREGS 285 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l-~~al~~mv-~eG~i~~e~~d~f-~~P~y~ps~eEv~~~i~~~gs 285 (366)
-.+-|+|||++++.-++..+... ...+++.. ...+.-+. .-|. .+.+.-+ ..--.+++++|+.+.+++.|
T Consensus 168 i~rvLkpGG~l~i~d~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~--~~~y~~l~~s~~~f~s~~el~~ll~~aG- 240 (261)
T PLN02233 168 MYRVLKPGSRVSILDFNKSTQPF----TTSMQEWMIDNVVVPVATGYGL--AKEYEYLKSSINEYLTGEELEKLALEAG- 240 (261)
T ss_pred HHHHcCcCcEEEEEECCCCCcHH----HHHHHHHHHhhhhhHHHHHhCC--hHHHHHHHHHHHhcCCHHHHHHHHHHCC-
Confidence 68999999999999887755310 00111111 10000000 0021 0111000 00123899999999999999
Q ss_pred eEEeeE
Q 017747 286 FKLDQL 291 (366)
Q Consensus 286 f~i~~~ 291 (366)
|++.+.
T Consensus 241 F~~~~~ 246 (261)
T PLN02233 241 FSSAKH 246 (261)
T ss_pred CCEEEE
Confidence 876543
|
|
| >COG4106 Tam Trans-aconitate methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.3e-09 Score=99.54 Aligned_cols=219 Identities=15% Similarity=0.200 Sum_probs=140.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
.+.+|+|+|||+|..|.+ |.++ -|..++..-|-..-+.......+|+. -
T Consensus 30 ~~~~v~DLGCGpGnsTel--------L~~R--------wP~A~i~GiDsS~~Mla~Aa~rlp~~---------------~ 78 (257)
T COG4106 30 RPRRVVDLGCGPGNSTEL--------LARR--------WPDAVITGIDSSPAMLAKAAQRLPDA---------------T 78 (257)
T ss_pred ccceeeecCCCCCHHHHH--------HHHh--------CCCCeEeeccCCHHHHHHHHHhCCCC---------------c
Confidence 468999999999999975 4444 35688999998776666665555531 1
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
|.-+ + ....-|+...|++||+.+||||.+-|..+ ..-
T Consensus 79 f~~a---D-l~~w~p~~~~dllfaNAvlqWlpdH~~ll---------------------------------------~rL 115 (257)
T COG4106 79 FEEA---D-LRTWKPEQPTDLLFANAVLQWLPDHPELL---------------------------------------PRL 115 (257)
T ss_pred eecc---c-HhhcCCCCccchhhhhhhhhhccccHHHH---------------------------------------HHH
Confidence 2221 1 14567999999999999999987655433 334
Q ss_pred HHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccC-ccccCCCHHHHHHHHhhcCceEE
Q 017747 210 SEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYH-AHFYAPSKEEIEGEVGREGSFKL 288 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~-~P~y~ps~eEv~~~i~~~gsf~i 288 (366)
-.+|.|||.|.+.+++.-++ -...++++.++++=...+ +.++. .----+|+..+-+++...+ -+|
T Consensus 116 ~~~L~Pgg~LAVQmPdN~de------------psH~~mr~~A~~~p~~~~-l~~~~~~r~~v~s~a~Yy~lLa~~~-~rv 181 (257)
T COG4106 116 VSQLAPGGVLAVQMPDNLDE------------PSHRLMRETADEAPFAQE-LGGRGLTRAPLPSPAAYYELLAPLA-CRV 181 (257)
T ss_pred HHhhCCCceEEEECCCccCc------------hhHHHHHHHHhcCchhhh-hCccccccCCCCCHHHHHHHhCccc-cee
Confidence 67899999999999766442 123344444444322222 22211 1223468888888888765 344
Q ss_pred eeEEEEeeccCCCCcccchhhhHhhhHHHhhh-hHHHhhcCCCcchHHHHHHHHHHHHHHHHHhcC-----CCcEEEEEE
Q 017747 289 DQLDMFQVERQGHDRGESYGSAVARTVRAIQE-STIIHHFGIGEGVLDNLFEIYGRLVDEEMAKEE-----IKPLTFVLL 362 (366)
Q Consensus 289 ~~~e~~~~~~~~~~d~~~~~~~~~~~~Ra~~e-~~l~~~~g~~~~i~d~lf~r~~~~~~~~~~~~~-----~~~~~~~~~ 362 (366)
+--+.... .+. ..++.++.|+++..- |++ ..++ ++-...+.++|..++++.+-.+. ..|.-++|+
T Consensus 182 DiW~T~Y~--h~l----~~a~aIvdWvkgTgLrP~L-~~L~--e~~~~~FL~~Y~~~l~~aYP~~~dGr~ll~FpRlFiV 252 (257)
T COG4106 182 DIWHTTYY--HQL----PGADAIVDWVKGTGLRPYL-DRLD--EEERQRFLDRYLALLAEAYPPRADGRVLLAFPRLFIV 252 (257)
T ss_pred eeeeeecc--ccC----CCccchhhheeccccceec-cccC--HHHHHHHHHHHHHHHHHhCCCccCCcEEeecceEEEE
Confidence 33333211 111 135679999997654 777 4577 88899999999999988765431 445556666
Q ss_pred Eee
Q 017747 363 LRK 365 (366)
Q Consensus 363 l~k 365 (366)
-+|
T Consensus 253 A~~ 255 (257)
T COG4106 253 ATR 255 (257)
T ss_pred Eec
Confidence 554
|
|
| >TIGR00740 methyltransferase, putative | Back alignment and domain information |
|---|
Probab=99.08 E-value=2e-09 Score=100.65 Aligned_cols=163 Identities=19% Similarity=0.188 Sum_probs=97.5
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+.+.+ ..|..+++..|+..+.-...-+.+. . .+. ..++
T Consensus 53 ~~~~iLDlGcG~G~~~~~l~~~~--------------~~p~~~v~gvD~s~~ml~~a~~~~~-------~-~~~--~~~v 108 (239)
T TIGR00740 53 PDSNVYDLGCSRGAATLSARRNI--------------NQPNVKIIGIDNSQPMVERCRQHIA-------A-YHS--EIPV 108 (239)
T ss_pred CCCEEEEecCCCCHHHHHHHHhc--------------CCCCCeEEEEeCCHHHHHHHHHHHH-------h-cCC--CCCe
Confidence 45689999999999886532221 2345899999986643333222211 0 111 1122
Q ss_pred -EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
|+ .+++.+-.++ +.|++++++++||++. +|...+|+.
T Consensus 109 ~~~---~~d~~~~~~~--~~d~v~~~~~l~~~~~-------------------------------------~~~~~~l~~ 146 (239)
T TIGR00740 109 EIL---CNDIRHVEIK--NASMVILNFTLQFLPP-------------------------------------EDRIALLTK 146 (239)
T ss_pred EEE---ECChhhCCCC--CCCEEeeecchhhCCH-------------------------------------HHHHHHHHH
Confidence 33 3567443343 5789999999999742 123456778
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHH-cCccchhhh----cccCccccCCCHHHHHHHHhhc
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVS-QGEIEKEKL----VAYHAHFYAPSKEEIEGEVGRE 283 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~-eG~i~~e~~----d~f~~P~y~ps~eEv~~~i~~~ 283 (366)
-.+-|+|||+++++-..+.+... ..+.+.+.+..+.. +| .+.+++ +.+.-.....|++|+++.++++
T Consensus 147 i~~~LkpgG~l~i~d~~~~~~~~-------~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~a 218 (239)
T TIGR00740 147 IYEGLNPNGVLVLSEKFRFEDTK-------INHLLIDLHHQFKRANG-YSELEISQKRTALENVMRTDSIETHKARLKNV 218 (239)
T ss_pred HHHhcCCCeEEEEeecccCCCHh-------HHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHhccCCCCCHHHHHHHHHHc
Confidence 89999999999998654433211 12233333333332 34 344333 2333344567999999999999
Q ss_pred CceE
Q 017747 284 GSFK 287 (366)
Q Consensus 284 gsf~ 287 (366)
| |+
T Consensus 219 G-F~ 221 (239)
T TIGR00740 219 G-FS 221 (239)
T ss_pred C-Cc
Confidence 9 75
|
A simple BLAST search finds all members of this family and weaker hits to a large number of known and predicted methyltransferases. A single iteration with PSI-BLAST, keeping only clear members of the family, leads to a large number of highly significant hits to a set of known and predicted methyltransferases with a large repertoire of different specifities. This model is restricted to a subfamily found so far only in the Proteobacteria, sharing consistent length, full-length homology, and on average better than 35 % identity. It is reasonable to predict equivalent function within this subfamily. |
| >TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.1e-09 Score=101.58 Aligned_cols=170 Identities=17% Similarity=0.213 Sum_probs=96.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+ .+.. .|..+++..|+..+....+-+.+. . .+ ..++
T Consensus 45 ~~~~vLDiGcG~G~~~~~l--------a~~~-------~~~~~v~gvD~s~~~~~~a~~~~~-------~-~~---~~~v 98 (231)
T TIGR02752 45 AGTSALDVCCGTADWSIAL--------AEAV-------GPEGHVIGLDFSENMLSVGRQKVK-------D-AG---LHNV 98 (231)
T ss_pred CCCEEEEeCCCcCHHHHHH--------HHHh-------CCCCEEEEEECCHHHHHHHHHHHH-------h-cC---CCce
Confidence 3579999999999988642 2211 234789999986543222211111 0 00 1122
Q ss_pred -EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
++. +++..-.+|++++|++++..++||++.. ..+|+.
T Consensus 99 ~~~~---~d~~~~~~~~~~fD~V~~~~~l~~~~~~---------------------------------------~~~l~~ 136 (231)
T TIGR02752 99 ELVH---GNAMELPFDDNSFDYVTIGFGLRNVPDY---------------------------------------MQVLRE 136 (231)
T ss_pred EEEE---echhcCCCCCCCccEEEEecccccCCCH---------------------------------------HHHHHH
Confidence 333 4554545788999999999999997542 123556
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhH----HHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcC
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFF----WELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREG 284 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~----~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~g 284 (366)
-.+-|+|||++++.-.+.++.. ....+ +..+...+......+..+.... ......+|+.+|+++.+++.|
T Consensus 137 ~~~~Lk~gG~l~~~~~~~~~~~----~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~aG 210 (231)
T TIGR02752 137 MYRVVKPGGKVVCLETSQPTIP----GFKQLYFFYFKYIMPLFGKLFAKSYKEYSWL--QESTRDFPGMDELAEMFQEAG 210 (231)
T ss_pred HHHHcCcCeEEEEEECCCCCCh----HHHHHHHHHHcChhHHhhHHhcCCHHHHHHH--HHHHHHcCCHHHHHHHHHHcC
Confidence 6789999999998765543321 00000 0001111111111111000000 012236889999999999999
Q ss_pred ceEEeeEEEE
Q 017747 285 SFKLDQLDMF 294 (366)
Q Consensus 285 sf~i~~~e~~ 294 (366)
|++.+++.+
T Consensus 211 -f~~~~~~~~ 219 (231)
T TIGR02752 211 -FKDVEVKSY 219 (231)
T ss_pred -CCeeEEEEc
Confidence 988766654
|
MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species. |
| >COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=99.02 E-value=5e-10 Score=104.97 Aligned_cols=167 Identities=16% Similarity=0.234 Sum_probs=107.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
+..+|||+|||||.-++.+.+.+ | ..+|+..|...++.+..-+.+... +. ..-.
T Consensus 51 ~g~~vLDva~GTGd~a~~~~k~~------------g----~g~v~~~D~s~~ML~~a~~k~~~~--------~~--~~i~ 104 (238)
T COG2226 51 PGDKVLDVACGTGDMALLLAKSV------------G----TGEVVGLDISESMLEVAREKLKKK--------GV--QNVE 104 (238)
T ss_pred CCCEEEEecCCccHHHHHHHHhc------------C----CceEEEEECCHHHHHHHHHHhhcc--------Cc--cceE
Confidence 57999999999999998643322 2 489999999988776665544320 11 1112
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
|+. |++.+-.||++|+|++.+++.||++.+.+..| +--
T Consensus 105 fv~---~dAe~LPf~D~sFD~vt~~fglrnv~d~~~aL---------------------------------------~E~ 142 (238)
T COG2226 105 FVV---GDAENLPFPDNSFDAVTISFGLRNVTDIDKAL---------------------------------------KEM 142 (238)
T ss_pred EEE---echhhCCCCCCccCEEEeeehhhcCCCHHHHH---------------------------------------HHH
Confidence 444 58877779999999999999999998866554 344
Q ss_pred HHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHH-HHHHHHHcCccc--hhhhc-ccCccccCCCHHHHHHHHhhcCc
Q 017747 210 SEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSR-SLAILVSQGEIE--KEKLV-AYHAHFYAPSKEEIEGEVGREGS 285 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~-al~~mv~eG~i~--~e~~d-~f~~P~y~ps~eEv~~~i~~~gs 285 (366)
+|-|||||++++.=+.+++..+... ........ ++-.+ -.+++ .+.+. -....-.+|+.+++...+++.|
T Consensus 143 ~RVlKpgG~~~vle~~~p~~~~~~~---~~~~~~~~~v~P~~--g~~~~~~~~~y~yL~eSi~~~p~~~~l~~~~~~~g- 216 (238)
T COG2226 143 YRVLKPGGRLLVLEFSKPDNPVLRK---AYILYYFKYVLPLI--GKLVAKDAEAYEYLAESIRRFPDQEELKQMIEKAG- 216 (238)
T ss_pred HHhhcCCeEEEEEEcCCCCchhhHH---HHHHHHHHhHhhhh--ceeeecChHHHHHHHHHHHhCCCHHHHHHHHHhcC-
Confidence 8999999999998777765422110 01111111 11111 01111 11111 1133445899999999999999
Q ss_pred eEEee
Q 017747 286 FKLDQ 290 (366)
Q Consensus 286 f~i~~ 290 (366)
|+...
T Consensus 217 f~~i~ 221 (238)
T COG2226 217 FEEVR 221 (238)
T ss_pred ceEEe
Confidence 87654
|
|
| >PTZ00098 phosphoethanolamine N-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=2e-08 Score=95.72 Aligned_cols=151 Identities=15% Similarity=0.129 Sum_probs=94.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+. +. . ..+|+..|+..+.....-+.... . ..-.
T Consensus 52 ~~~~VLDiGcG~G~~a~~la--------~~--------~-~~~v~giD~s~~~~~~a~~~~~~-----------~-~~i~ 102 (263)
T PTZ00098 52 ENSKVLDIGSGLGGGCKYIN--------EK--------Y-GAHVHGVDICEKMVNIAKLRNSD-----------K-NKIE 102 (263)
T ss_pred CCCEEEEEcCCCChhhHHHH--------hh--------c-CCEEEEEECCHHHHHHHHHHcCc-----------C-CceE
Confidence 45799999999999876431 21 1 26899999876543332221110 0 1122
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
|.. +++.+..+|++++|+++|..++++++. .|...+|+.-
T Consensus 103 ~~~---~D~~~~~~~~~~FD~V~s~~~l~h~~~-------------------------------------~d~~~~l~~i 142 (263)
T PTZ00098 103 FEA---NDILKKDFPENTFDMIYSRDAILHLSY-------------------------------------ADKKKLFEKC 142 (263)
T ss_pred EEE---CCcccCCCCCCCeEEEEEhhhHHhCCH-------------------------------------HHHHHHHHHH
Confidence 333 577666689999999999888766421 2344567777
Q ss_pred HHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEe
Q 017747 210 SEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLD 289 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~ 289 (366)
++-|+|||+++++-....+... + ...+....... ....++++++.+.+++.| |+..
T Consensus 143 ~r~LkPGG~lvi~d~~~~~~~~--------~---~~~~~~~~~~~------------~~~~~~~~~~~~~l~~aG-F~~v 198 (263)
T PTZ00098 143 YKWLKPNGILLITDYCADKIEN--------W---DEEFKAYIKKR------------KYTLIPIQEYGDLIKSCN-FQNV 198 (263)
T ss_pred HHHcCCCcEEEEEEeccccccC--------c---HHHHHHHHHhc------------CCCCCCHHHHHHHHHHCC-CCee
Confidence 9999999999998665543210 1 11111111110 123579999999999999 8876
Q ss_pred eEEE
Q 017747 290 QLDM 293 (366)
Q Consensus 290 ~~e~ 293 (366)
..+.
T Consensus 199 ~~~d 202 (263)
T PTZ00098 199 VAKD 202 (263)
T ss_pred eEEe
Confidence 5553
|
|
| >PLN02336 phosphoethanolamine N-methyltransferase | Back alignment and domain information |
|---|
Probab=98.92 E-value=2.9e-08 Score=102.00 Aligned_cols=193 Identities=15% Similarity=0.198 Sum_probs=114.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++. +.+. . ..+++..|+........-+.. .+.. ..-.
T Consensus 266 ~~~~vLDiGcG~G~~~~~--------la~~--------~-~~~v~gvDiS~~~l~~A~~~~----------~~~~-~~v~ 317 (475)
T PLN02336 266 PGQKVLDVGCGIGGGDFY--------MAEN--------F-DVHVVGIDLSVNMISFALERA----------IGRK-CSVE 317 (475)
T ss_pred CCCEEEEEeccCCHHHHH--------HHHh--------c-CCEEEEEECCHHHHHHHHHHh----------hcCC-CceE
Confidence 457999999999987754 2221 1 268999998653221111100 0110 1112
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
|.. +++....+|++++|+++|..+++|+.+.+ .+|+.-
T Consensus 318 ~~~---~d~~~~~~~~~~fD~I~s~~~l~h~~d~~---------------------------------------~~l~~~ 355 (475)
T PLN02336 318 FEV---ADCTKKTYPDNSFDVIYSRDTILHIQDKP---------------------------------------ALFRSF 355 (475)
T ss_pred EEE---cCcccCCCCCCCEEEEEECCcccccCCHH---------------------------------------HHHHHH
Confidence 333 46767678899999999999999975421 234566
Q ss_pred HHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEe
Q 017747 210 SEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLD 289 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~ 289 (366)
++-|+|||+++++...+....+. . .+...+.. . -...++.+++.+.+++.| |++.
T Consensus 356 ~r~LkpgG~l~i~~~~~~~~~~~-----~---~~~~~~~~---~-------------g~~~~~~~~~~~~l~~aG-F~~i 410 (475)
T PLN02336 356 FKWLKPGGKVLISDYCRSPGTPS-----P---EFAEYIKQ---R-------------GYDLHDVQAYGQMLKDAG-FDDV 410 (475)
T ss_pred HHHcCCCeEEEEEEeccCCCCCc-----H---HHHHHHHh---c-------------CCCCCCHHHHHHHHHHCC-Ceee
Confidence 88999999999998876543211 0 11111111 1 124678999999999999 9886
Q ss_pred eEEEEeeccCCCCcccchhhhHhhhHHHhhh--hHHHhhcCCCcchHHHHHHHHHHHHHHH
Q 017747 290 QLDMFQVERQGHDRGESYGSAVARTVRAIQE--STIIHHFGIGEGVLDNLFEIYGRLVDEE 348 (366)
Q Consensus 290 ~~e~~~~~~~~~~d~~~~~~~~~~~~Ra~~e--~~l~~~~g~~~~i~d~lf~r~~~~~~~~ 348 (366)
..+.+... +...+..+..++.. .-+...+| ++..+.+...+.+.+...
T Consensus 411 ~~~d~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~ 460 (475)
T PLN02336 411 IAEDRTDQ---------FLQVLQRELDAVEKEKDEFISDFS--EEDYNDIVGGWKAKLVRS 460 (475)
T ss_pred eeecchHH---------HHHHHHHHHHHHHhCHHHHHHhcC--HHHHHHHHHhHHHHHhhh
Confidence 55433221 33444444444322 12224577 666677666666665543
|
|
| >PLN02244 tocopherol O-methyltransferase | Back alignment and domain information |
|---|
Probab=98.92 E-value=1e-08 Score=101.26 Aligned_cols=160 Identities=12% Similarity=0.110 Sum_probs=94.4
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|.++..+ .+++ ..+|+..|+..+.-...-+.. ...+.. ..-.
T Consensus 118 ~~~~VLDiGCG~G~~~~~L--------a~~~---------g~~v~gvD~s~~~i~~a~~~~--------~~~g~~-~~v~ 171 (340)
T PLN02244 118 RPKRIVDVGCGIGGSSRYL--------ARKY---------GANVKGITLSPVQAARANALA--------AAQGLS-DKVS 171 (340)
T ss_pred CCCeEEEecCCCCHHHHHH--------HHhc---------CCEEEEEECCHHHHHHHHHHH--------HhcCCC-CceE
Confidence 4578999999999998753 2221 267888888654322221111 111110 1123
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
|.. +++.+..||++++|+++|..++|++.+. ..+|+.-
T Consensus 172 ~~~---~D~~~~~~~~~~FD~V~s~~~~~h~~d~---------------------------------------~~~l~e~ 209 (340)
T PLN02244 172 FQV---ADALNQPFEDGQFDLVWSMESGEHMPDK---------------------------------------RKFVQEL 209 (340)
T ss_pred EEE---cCcccCCCCCCCccEEEECCchhccCCH---------------------------------------HHHHHHH
Confidence 444 4665656899999999999999886431 1245556
Q ss_pred HHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEe
Q 017747 210 SEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLD 289 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~ 289 (366)
.+-|+|||++++......+..+...... ..-...+..+. ..+.+| .+.+.+|+.+.+++.| |+..
T Consensus 210 ~rvLkpGG~lvi~~~~~~~~~~~~~~l~---~~~~~~~~~i~----------~~~~~p-~~~s~~~~~~~l~~aG-f~~v 274 (340)
T PLN02244 210 ARVAAPGGRIIIVTWCHRDLEPGETSLK---PDEQKLLDKIC----------AAYYLP-AWCSTSDYVKLAESLG-LQDI 274 (340)
T ss_pred HHHcCCCcEEEEEEecccccccccccCC---HHHHHHHHHHH----------hhccCC-CCCCHHHHHHHHHHCC-CCee
Confidence 8899999999998776544322111111 01112222221 112344 2458999999999999 8775
Q ss_pred eEE
Q 017747 290 QLD 292 (366)
Q Consensus 290 ~~e 292 (366)
+.+
T Consensus 275 ~~~ 277 (340)
T PLN02244 275 KTE 277 (340)
T ss_pred Eee
Confidence 543
|
|
| >PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=1e-08 Score=97.01 Aligned_cols=165 Identities=16% Similarity=0.253 Sum_probs=96.3
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+.+.+|+|+|||+|..+..+ .+. ..+|+..|+....-..+-+.+. ..+. ..+
T Consensus 43 ~~~~~vLDiGcG~G~~a~~l--------a~~----------g~~v~~vD~s~~~l~~a~~~~~--------~~g~--~~~ 94 (255)
T PRK11036 43 PRPLRVLDAGGGEGQTAIKL--------AEL----------GHQVILCDLSAEMIQRAKQAAE--------AKGV--SDN 94 (255)
T ss_pred CCCCEEEEeCCCchHHHHHH--------HHc----------CCEEEEEECCHHHHHHHHHHHH--------hcCC--ccc
Confidence 45689999999999988653 221 1678899986543222211111 1111 112
Q ss_pred -eEEeccCCCccccc-CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 129 -VYIAGYPGSFYGRL-FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 129 -~f~~~vpgSFy~~l-fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
.|+. +++.+-. ++++++|++++..++||+.+.+ . +|
T Consensus 95 v~~~~---~d~~~l~~~~~~~fD~V~~~~vl~~~~~~~-~--------------------------------------~l 132 (255)
T PRK11036 95 MQFIH---CAAQDIAQHLETPVDLILFHAVLEWVADPK-S--------------------------------------VL 132 (255)
T ss_pred eEEEE---cCHHHHhhhcCCCCCEEEehhHHHhhCCHH-H--------------------------------------HH
Confidence 2344 3443321 5678999999999999986522 1 24
Q ss_pred HHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCce
Q 017747 207 RSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSF 286 (366)
Q Consensus 207 ~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf 286 (366)
+.-++-|+|||++++.+...... .+-..+..-+.. +..|+...+.. ...|.+..+++++.+.+++.| |
T Consensus 133 ~~~~~~LkpgG~l~i~~~n~~~~--------~~~~~~~~~~~~-~~~~~~~~~~~--~~~p~~~~~~~~l~~~l~~aG-f 200 (255)
T PRK11036 133 QTLWSVLRPGGALSLMFYNANGL--------LMHNMVAGNFDY-VQAGMPKRKKR--TLSPDYPLDPEQVYQWLEEAG-W 200 (255)
T ss_pred HHHHHHcCCCeEEEEEEECccHH--------HHHHHHccChHH-HHhcCcccccc--CCCCCCCCCHHHHHHHHHHCC-C
Confidence 45578999999999987654321 011111111111 12232211111 123567789999999999999 9
Q ss_pred EEeeEEEEe
Q 017747 287 KLDQLDMFQ 295 (366)
Q Consensus 287 ~i~~~e~~~ 295 (366)
++....-+.
T Consensus 201 ~~~~~~gi~ 209 (255)
T PRK11036 201 QIMGKTGVR 209 (255)
T ss_pred eEeeeeeEE
Confidence 987665543
|
|
| >PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities [] | Back alignment and domain information |
|---|
Probab=98.89 E-value=7.2e-10 Score=103.91 Aligned_cols=164 Identities=20% Similarity=0.254 Sum_probs=67.9
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||||..|..+ .++ -.|..+|+..|+..++....-+.+.. .+ ..++
T Consensus 47 ~g~~vLDv~~GtG~~~~~l--------~~~-------~~~~~~v~~vD~s~~ML~~a~~k~~~--------~~---~~~i 100 (233)
T PF01209_consen 47 PGDRVLDVACGTGDVTREL--------ARR-------VGPNGKVVGVDISPGMLEVARKKLKR--------EG---LQNI 100 (233)
T ss_dssp S--EEEEET-TTSHHHHHH--------GGG-------SS---EEEEEES-HHHHHHHHHHHHH--------TT-----SE
T ss_pred CCCEEEEeCCChHHHHHHH--------HHH-------CCCccEEEEecCCHHHHHHHHHHHHh--------hC---CCCe
Confidence 4689999999999988742 221 13457999999987654444332221 01 1234
Q ss_pred -EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
|+. ++..+-.||++|+|.+++++.+|-+.+.+. .|+.
T Consensus 101 ~~v~---~da~~lp~~d~sfD~v~~~fglrn~~d~~~---------------------------------------~l~E 138 (233)
T PF01209_consen 101 EFVQ---GDAEDLPFPDNSFDAVTCSFGLRNFPDRER---------------------------------------ALRE 138 (233)
T ss_dssp EEEE----BTTB--S-TT-EEEEEEES-GGG-SSHHH---------------------------------------HHHH
T ss_pred eEEE---cCHHHhcCCCCceeEEEHHhhHHhhCCHHH---------------------------------------HHHH
Confidence 444 467566699999999999999998755322 2445
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHH---HcCccchhhhccc----CccccCCCHHHHHHHHh
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILV---SQGEIEKEKLVAY----HAHFYAPSKEEIEGEVG 281 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv---~eG~i~~e~~d~f----~~P~y~ps~eEv~~~i~ 281 (366)
-.+-|||||++++.=++++... ++..+-..+-..+ --.++..+ .+.+ ..-..||+++|+.+.++
T Consensus 139 ~~RVLkPGG~l~ile~~~p~~~--------~~~~~~~~y~~~ilP~~g~l~~~~-~~~Y~yL~~Si~~f~~~~~~~~~l~ 209 (233)
T PF01209_consen 139 MYRVLKPGGRLVILEFSKPRNP--------LLRALYKFYFKYILPLIGRLLSGD-REAYRYLPESIRRFPSPEELKELLE 209 (233)
T ss_dssp HHHHEEEEEEEEEEEEEB-SSH--------HHHHHHHH------------------------------------------
T ss_pred HHHHcCCCeEEEEeeccCCCCc--------hhhceeeeeecccccccccccccc-ccccccccccccccccccccccccc
Confidence 5899999999999888886531 1111111111100 01222222 1111 22234899999999999
Q ss_pred hcCceEEeeE
Q 017747 282 REGSFKLDQL 291 (366)
Q Consensus 282 ~~gsf~i~~~ 291 (366)
+.| |+..+.
T Consensus 210 ~~G-f~~v~~ 218 (233)
T PF01209_consen 210 EAG-FKNVEY 218 (233)
T ss_dssp ----------
T ss_pred ccc-cccccc
Confidence 999 875333
|
Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C. |
| >PRK08317 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=2.8e-07 Score=84.65 Aligned_cols=204 Identities=17% Similarity=0.192 Sum_probs=109.4
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+ .+++ .|..+++..|+..+.....-+... ... ....
T Consensus 19 ~~~~vLdiG~G~G~~~~~~--------a~~~-------~~~~~v~~~d~~~~~~~~a~~~~~----------~~~-~~~~ 72 (241)
T PRK08317 19 PGDRVLDVGCGPGNDAREL--------ARRV-------GPEGRVVGIDRSEAMLALAKERAA----------GLG-PNVE 72 (241)
T ss_pred CCCEEEEeCCCCCHHHHHH--------HHhc-------CCCcEEEEEeCCHHHHHHHHHHhh----------CCC-CceE
Confidence 4579999999999987642 2221 134688999986543222221100 000 1122
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
|.. +++....++++++|++++..++||+.+.+ .+|+..
T Consensus 73 ~~~---~d~~~~~~~~~~~D~v~~~~~~~~~~~~~---------------------------------------~~l~~~ 110 (241)
T PRK08317 73 FVR---GDADGLPFPDGSFDAVRSDRVLQHLEDPA---------------------------------------RALAEI 110 (241)
T ss_pred EEe---cccccCCCCCCCceEEEEechhhccCCHH---------------------------------------HHHHHH
Confidence 333 35544457889999999999999976521 234566
Q ss_pred HHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEe
Q 017747 210 SEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLD 289 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~ 289 (366)
.+-|+|||++++....-++... .......+..+...|.. . +.- ..+..++.+.+++.| |+..
T Consensus 111 ~~~L~~gG~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~----------~~~---~~~~~~~~~~l~~aG-f~~~ 172 (241)
T PRK08317 111 ARVLRPGGRVVVLDTDWDTLVW-HSGDRALMRKILNFWSD---H----------FAD---PWLGRRLPGLFREAG-LTDI 172 (241)
T ss_pred HHHhcCCcEEEEEecCCCceee-cCCChHHHHHHHHHHHh---c----------CCC---CcHHHHHHHHHHHcC-CCce
Confidence 8899999999998654322110 01111112222222221 1 111 124568999999999 8887
Q ss_pred eEEEEeeccCCCCcccchhhhHhhhHHHhhhhHHHhhcCCCcchHHHHHHHHHHHH
Q 017747 290 QLDMFQVERQGHDRGESYGSAVARTVRAIQESTIIHHFGIGEGVLDNLFEIYGRLV 345 (366)
Q Consensus 290 ~~e~~~~~~~~~~d~~~~~~~~~~~~Ra~~e~~l~~~~g~~~~i~d~lf~r~~~~~ 345 (366)
.++.+......... ......+...++.+.+ . -..+++-++++++.+++..
T Consensus 173 ~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~----~-~~~~~~~~~~~~~~l~~~~ 222 (241)
T PRK08317 173 EVEPYTLIETDLKE-ADKGFGLIRAARRAVE----A-GGISADEADAWLADLAQLA 222 (241)
T ss_pred eEEEEEEeccCcch-hhHHHHHHHHHHHHHH----c-CCCCHHHHHHHHHHHHHHH
Confidence 77776544322211 0112223333333322 1 1112555677777666644
|
|
| >PRK15451 tRNA cmo(5)U34 methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=4e-08 Score=92.63 Aligned_cols=165 Identities=16% Similarity=0.166 Sum_probs=95.9
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+...+|+|+|||+|.++..+ .+.. ..|..+++.-|+....-...-+.+.. .+. ..+
T Consensus 55 ~~~~~vLDlGcGtG~~~~~l--------~~~~------~~~~~~v~gvD~S~~ml~~A~~~~~~--------~~~--~~~ 110 (247)
T PRK15451 55 QPGTQVYDLGCSLGAATLSV--------RRNI------HHDNCKIIAIDNSPAMIERCRRHIDA--------YKA--PTP 110 (247)
T ss_pred CCCCEEEEEcccCCHHHHHH--------HHhc------CCCCCeEEEEeCCHHHHHHHHHHHHh--------cCC--CCC
Confidence 34578999999999988642 2210 13458999999866433322221110 011 112
Q ss_pred e-EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 129 ~-f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
+ ++ .+++.+- |....|+++++.++||++. + +...+|+
T Consensus 111 v~~~---~~d~~~~--~~~~~D~vv~~~~l~~l~~-~------------------------------------~~~~~l~ 148 (247)
T PRK15451 111 VDVI---EGDIRDI--AIENASMVVLNFTLQFLEP-S------------------------------------ERQALLD 148 (247)
T ss_pred eEEE---eCChhhC--CCCCCCEEehhhHHHhCCH-H------------------------------------HHHHHHH
Confidence 2 32 3455433 3345899999999999753 1 1224466
Q ss_pred HHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcc----cCccccCCCHHHHHHHHhhc
Q 017747 208 SRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVA----YHAHFYAPSKEEIEGEVGRE 283 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~----f~~P~y~ps~eEv~~~i~~~ 283 (366)
.-++-|+|||.++++-.-..... ...+.+...|.++....-.+++++.. ..--...-|+++..+.+++.
T Consensus 149 ~i~~~LkpGG~l~l~e~~~~~~~-------~~~~~~~~~~~~~~~~~g~s~~ei~~~~~~~~~~~~~~~~~~~~~~L~~a 221 (247)
T PRK15451 149 KIYQGLNPGGALVLSEKFSFEDA-------KVGELLFNMHHDFKRANGYSELEISQKRSMLENVMLTDSVETHKARLHKA 221 (247)
T ss_pred HHHHhcCCCCEEEEEEecCCCcc-------hhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcccCCHHHHHHHHHHc
Confidence 77899999999999853222211 12233444555554343355555533 22222224899999999999
Q ss_pred CceE
Q 017747 284 GSFK 287 (366)
Q Consensus 284 gsf~ 287 (366)
| |+
T Consensus 222 G-F~ 224 (247)
T PRK15451 222 G-FE 224 (247)
T ss_pred C-ch
Confidence 9 64
|
|
| >PRK06202 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=2.2e-07 Score=86.56 Aligned_cols=168 Identities=11% Similarity=0.105 Sum_probs=92.6
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
.++.+|+|+|||+|.++..+.... ++ ..+..+++..|+..+.....-+... . .+-
T Consensus 59 ~~~~~iLDlGcG~G~~~~~L~~~~----~~--------~g~~~~v~gvD~s~~~l~~a~~~~~-----------~--~~~ 113 (232)
T PRK06202 59 DRPLTLLDIGCGGGDLAIDLARWA----RR--------DGLRLEVTAIDPDPRAVAFARANPR-----------R--PGV 113 (232)
T ss_pred CCCcEEEEeccCCCHHHHHHHHHH----Hh--------CCCCcEEEEEcCCHHHHHHHHhccc-----------c--CCC
Confidence 356899999999999887532221 11 1334789999997643322211111 0 111
Q ss_pred eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
-+..+....+ .++++++|+++|+.++||+.+ + ++..+|+.
T Consensus 114 ~~~~~~~~~l---~~~~~~fD~V~~~~~lhh~~d-~------------------------------------~~~~~l~~ 153 (232)
T PRK06202 114 TFRQAVSDEL---VAEGERFDVVTSNHFLHHLDD-A------------------------------------EVVRLLAD 153 (232)
T ss_pred eEEEEecccc---cccCCCccEEEECCeeecCCh-H------------------------------------HHHHHHHH
Confidence 1222211111 137889999999999999855 1 12233444
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcC-ccchhhhcccCccccCCCHHHHHHHHhhcCceE
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQG-EIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFK 287 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG-~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~ 287 (366)
-.+-++ |.+++.-+.+... .+ - +..........| .+.. |....-.-++|++|+.+.+++ | |+
T Consensus 154 ~~r~~~--~~~~i~dl~~~~~-------~~--~-~~~~~~~~~~~~~~~~~---d~~~s~~~~~~~~el~~ll~~-G-f~ 216 (232)
T PRK06202 154 SAALAR--RLVLHNDLIRSRL-------AY--A-LFWAGTRLLSRSSFVHT---DGLLSVRRSYTPAELAALAPQ-G-WR 216 (232)
T ss_pred HHHhcC--eeEEEeccccCHH-------HH--H-HHHHHHHHhccCceeec---cchHHHHhhcCHHHHHHHhhC-C-Ce
Confidence 444444 5666665555421 11 1 111111111112 2222 223344568999999999998 7 99
Q ss_pred EeeEEEEeecc
Q 017747 288 LDQLDMFQVER 298 (366)
Q Consensus 288 i~~~e~~~~~~ 298 (366)
+.....|...|
T Consensus 217 ~~~~~~~~~~~ 227 (232)
T PRK06202 217 VERQWPFRYLL 227 (232)
T ss_pred EEeccceeeEE
Confidence 98877776554
|
|
| >PRK15068 tRNA mo(5)U34 methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.76 E-value=3.6e-08 Score=96.75 Aligned_cols=153 Identities=19% Similarity=0.238 Sum_probs=91.1
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceE
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVY 130 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 130 (366)
..+|+|+|||+|..+.. +.+. .+ -+|+..|.... +..-++... ...+. ..++.
T Consensus 123 g~~VLDIGCG~G~~~~~--------la~~--------g~-~~V~GiD~S~~-~l~q~~a~~-------~~~~~--~~~i~ 175 (322)
T PRK15068 123 GRTVLDVGCGNGYHMWR--------MLGA--------GA-KLVVGIDPSQL-FLCQFEAVR-------KLLGN--DQRAH 175 (322)
T ss_pred CCEEEEeccCCcHHHHH--------HHHc--------CC-CEEEEEcCCHH-HHHHHHHHH-------HhcCC--CCCeE
Confidence 46899999999999864 2221 22 35899995543 222221111 00000 11232
Q ss_pred EeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 017747 131 IAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRS 210 (366)
Q Consensus 131 ~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra 210 (366)
+ +++++ +.+-.++++|+++|..++||..+ | ..+|+.-+
T Consensus 176 ~--~~~d~-e~lp~~~~FD~V~s~~vl~H~~d-p--------------------------------------~~~L~~l~ 213 (322)
T PRK15068 176 L--LPLGI-EQLPALKAFDTVFSMGVLYHRRS-P--------------------------------------LDHLKQLK 213 (322)
T ss_pred E--EeCCH-HHCCCcCCcCEEEECChhhccCC-H--------------------------------------HHHHHHHH
Confidence 1 23455 33322789999999999998544 2 12356668
Q ss_pred HHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEee
Q 017747 211 EELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQ 290 (366)
Q Consensus 211 ~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~~ 290 (366)
+.|+|||++++..+..+..... .++ ..+.+..+...++.||.+++...+++.| |++.+
T Consensus 214 ~~LkpGG~lvl~~~~i~~~~~~-----~l~----------------p~~~y~~~~~~~~lps~~~l~~~L~~aG-F~~i~ 271 (322)
T PRK15068 214 DQLVPGGELVLETLVIDGDENT-----VLV----------------PGDRYAKMRNVYFIPSVPALKNWLERAG-FKDVR 271 (322)
T ss_pred HhcCCCcEEEEEEEEecCCCcc-----ccC----------------chhHHhcCccceeCCCHHHHHHHHHHcC-CceEE
Confidence 8999999999987654432110 000 0111223344456799999999999999 98766
Q ss_pred EEEE
Q 017747 291 LDMF 294 (366)
Q Consensus 291 ~e~~ 294 (366)
+...
T Consensus 272 ~~~~ 275 (322)
T PRK15068 272 IVDV 275 (322)
T ss_pred EEeC
Confidence 6543
|
|
| >PLN02396 hexaprenyldihydroxybenzoate methyltransferase | Back alignment and domain information |
|---|
Probab=98.74 E-value=7.1e-08 Score=94.60 Aligned_cols=158 Identities=13% Similarity=0.118 Sum_probs=94.7
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceE
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVY 130 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 130 (366)
..+|+|+|||+|..+.. +.+ +..+|+.-|..........+.. ...+.. ..-.|
T Consensus 132 g~~ILDIGCG~G~~s~~--------La~----------~g~~V~GID~s~~~i~~Ar~~~--------~~~~~~-~~i~~ 184 (322)
T PLN02396 132 GLKFIDIGCGGGLLSEP--------LAR----------MGATVTGVDAVDKNVKIARLHA--------DMDPVT-STIEY 184 (322)
T ss_pred CCEEEEeeCCCCHHHHH--------HHH----------cCCEEEEEeCCHHHHHHHHHHH--------HhcCcc-cceeE
Confidence 46999999999998764 222 1268899998764433222111 000000 11124
Q ss_pred EeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 017747 131 IAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRS 210 (366)
Q Consensus 131 ~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra 210 (366)
.. +++.+-.++++++|++++..++||+.+.+ .||+..+
T Consensus 185 ~~---~dae~l~~~~~~FD~Vi~~~vLeHv~d~~---------------------------------------~~L~~l~ 222 (322)
T PLN02396 185 LC---TTAEKLADEGRKFDAVLSLEVIEHVANPA---------------------------------------EFCKSLS 222 (322)
T ss_pred Ee---cCHHHhhhccCCCCEEEEhhHHHhcCCHH---------------------------------------HHHHHHH
Confidence 44 35544346788999999999999976522 3566778
Q ss_pred HHhccCceEEEEeecCCCCCCCCCCchhHHHHH-HHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEe
Q 017747 211 EELVVGGRMVLILLGRIGPDHVDRGNSFFWELL-SRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLD 289 (366)
Q Consensus 211 ~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l-~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~ 289 (366)
+-|+|||+++++.+.+... .+..... ..-+..++..| ......+.+++|+...+++.| |++.
T Consensus 223 r~LkPGG~liist~nr~~~-------~~~~~i~~~eyi~~~lp~g---------th~~~~f~tp~eL~~lL~~aG-f~i~ 285 (322)
T PLN02396 223 ALTIPNGATVLSTINRTMR-------AYASTIVGAEYILRWLPKG---------THQWSSFVTPEELSMILQRAS-VDVK 285 (322)
T ss_pred HHcCCCcEEEEEECCcCHH-------HHHHhhhhHHHHHhcCCCC---------CcCccCCCCHHHHHHHHHHcC-CeEE
Confidence 8899999999998765321 1111111 11111111112 111224789999999999999 9887
Q ss_pred eEEEE
Q 017747 290 QLDMF 294 (366)
Q Consensus 290 ~~e~~ 294 (366)
.+.-+
T Consensus 286 ~~~G~ 290 (322)
T PLN02396 286 EMAGF 290 (322)
T ss_pred EEeee
Confidence 76543
|
|
| >PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.8e-08 Score=79.08 Aligned_cols=95 Identities=26% Similarity=0.347 Sum_probs=61.0
Q ss_pred EeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceEEecc
Q 017747 55 ADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVYIAGY 134 (366)
Q Consensus 55 aDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~~~v 134 (366)
||+|||+|.++.. +.++ +..+++..|.....-...-+... . ...-+..
T Consensus 1 LdiG~G~G~~~~~--------l~~~---------~~~~v~~~D~~~~~~~~~~~~~~-----------~--~~~~~~~-- 48 (95)
T PF08241_consen 1 LDIGCGTGRFAAA--------LAKR---------GGASVTGIDISEEMLEQARKRLK-----------N--EGVSFRQ-- 48 (95)
T ss_dssp EEET-TTSHHHHH--------HHHT---------TTCEEEEEES-HHHHHHHHHHTT-----------T--STEEEEE--
T ss_pred CEecCcCCHHHHH--------HHhc---------cCCEEEEEeCCHHHHHHHHhccc-----------c--cCchhee--
Confidence 7999999999875 3221 23889999986532221111111 0 1112344
Q ss_pred CCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 017747 135 PGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELV 214 (366)
Q Consensus 135 pgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 214 (366)
+++..-.||++|+|++++..++||+. |...+|+.-.+-||
T Consensus 49 -~d~~~l~~~~~sfD~v~~~~~~~~~~---------------------------------------~~~~~l~e~~rvLk 88 (95)
T PF08241_consen 49 -GDAEDLPFPDNSFDVVFSNSVLHHLE---------------------------------------DPEAALREIYRVLK 88 (95)
T ss_dssp -SBTTSSSS-TT-EEEEEEESHGGGSS---------------------------------------HHHHHHHHHHHHEE
T ss_pred -ehHHhCccccccccccccccceeecc---------------------------------------CHHHHHHHHHHHcC
Confidence 46766679999999999999999981 23445677799999
Q ss_pred cCceEEE
Q 017747 215 VGGRMVL 221 (366)
Q Consensus 215 ~GG~lvl 221 (366)
|||++++
T Consensus 89 ~gG~l~~ 95 (95)
T PF08241_consen 89 PGGRLVI 95 (95)
T ss_dssp EEEEEEE
T ss_pred cCeEEeC
Confidence 9999986
|
The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B .... |
| >PF13489 Methyltransf_23: Methyltransferase domain; PDB: 3JWJ_A 3JWH_B 2AOV_B 2AOT_A 1JQD_B 2AOX_A 1JQE_A 2AOU_B 2AOW_A 3DLI_C | Back alignment and domain information |
|---|
Probab=98.74 E-value=5e-08 Score=84.28 Aligned_cols=138 Identities=24% Similarity=0.306 Sum_probs=88.4
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+...+|+|+|||+|.++.. +++. + .+++..|........ ..
T Consensus 21 ~~~~~vLDiGcG~G~~~~~--------l~~~---------~-~~~~g~D~~~~~~~~------------~~--------- 61 (161)
T PF13489_consen 21 KPGKRVLDIGCGTGSFLRA--------LAKR---------G-FEVTGVDISPQMIEK------------RN--------- 61 (161)
T ss_dssp TTTSEEEEESSTTSHHHHH--------HHHT---------T-SEEEEEESSHHHHHH------------TT---------
T ss_pred CCCCEEEEEcCCCCHHHHH--------HHHh---------C-CEEEEEECCHHHHhh------------hh---------
Confidence 4578999999999987653 3221 2 488888875421111 00
Q ss_pred eEEeccCCCcc--cccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFY--GRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 129 ~f~~~vpgSFy--~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
.++..|. ...+|++++|+++|+.+|||+.+ | ..+|
T Consensus 62 ----~~~~~~~~~~~~~~~~~fD~i~~~~~l~~~~d-~--------------------------------------~~~l 98 (161)
T PF13489_consen 62 ----VVFDNFDAQDPPFPDGSFDLIICNDVLEHLPD-P--------------------------------------EEFL 98 (161)
T ss_dssp ----SEEEEEECHTHHCHSSSEEEEEEESSGGGSSH-H--------------------------------------HHHH
T ss_pred ----hhhhhhhhhhhhccccchhhHhhHHHHhhccc-H--------------------------------------HHHH
Confidence 0111221 34478999999999999999764 2 2346
Q ss_pred HHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCce
Q 017747 207 RSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSF 286 (366)
Q Consensus 207 ~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf 286 (366)
+.-.+-|+|||+++++...+... ....+..+ ...... .--..+.+.++++.++++.| |
T Consensus 99 ~~l~~~LkpgG~l~~~~~~~~~~-------------~~~~~~~~---~~~~~~-----~~~~~~~~~~~~~~ll~~~G-~ 156 (161)
T PF13489_consen 99 KELSRLLKPGGYLVISDPNRDDP-------------SPRSFLKW---RYDRPY-----GGHVHFFSPDELRQLLEQAG-F 156 (161)
T ss_dssp HHHHHCEEEEEEEEEEEEBTTSH-------------HHHHHHHC---CGTCHH-----TTTTEEBBHHHHHHHHHHTT-E
T ss_pred HHHHHhcCCCCEEEEEEcCCcch-------------hhhHHHhc---CCcCcc-----CceeccCCHHHHHHHHHHCC-C
Confidence 67789999999999999887531 11222221 100000 01125669999999999999 8
Q ss_pred EEee
Q 017747 287 KLDQ 290 (366)
Q Consensus 287 ~i~~ 290 (366)
+|.+
T Consensus 157 ~iv~ 160 (161)
T PF13489_consen 157 EIVE 160 (161)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8753
|
... |
| >PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional | Back alignment and domain information |
|---|
Probab=98.71 E-value=1.4e-06 Score=87.51 Aligned_cols=201 Identities=13% Similarity=0.170 Sum_probs=116.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+ .+. . ..+|+..|+........-+... + . .+
T Consensus 167 ~g~rVLDIGcG~G~~a~~l--------a~~--------~-g~~V~giDlS~~~l~~A~~~~~----------~---l-~v 215 (383)
T PRK11705 167 PGMRVLDIGCGWGGLARYA--------AEH--------Y-GVSVVGVTISAEQQKLAQERCA----------G---L-PV 215 (383)
T ss_pred CCCEEEEeCCCccHHHHHH--------HHH--------C-CCEEEEEeCCHHHHHHHHHHhc----------c---C-eE
Confidence 3479999999999988643 221 1 2678888987643332222111 0 1 11
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
....+++ ..+ ++++|.++|...++|+.. +++..+|+.-
T Consensus 216 --~~~~~D~-~~l--~~~fD~Ivs~~~~ehvg~-------------------------------------~~~~~~l~~i 253 (383)
T PRK11705 216 --EIRLQDY-RDL--NGQFDRIVSVGMFEHVGP-------------------------------------KNYRTYFEVV 253 (383)
T ss_pred --EEEECch-hhc--CCCCCEEEEeCchhhCCh-------------------------------------HHHHHHHHHH
Confidence 1112343 233 578999999988888521 2344567778
Q ss_pred HHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccc-cCCCHHHHHHHHhhcCceEE
Q 017747 210 SEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHF-YAPSKEEIEGEVGREGSFKL 288 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~-y~ps~eEv~~~i~~~gsf~i 288 (366)
.+-|+|||++++..++.+..... . ..-++.+..|- +.|+.+++....+ .| |++
T Consensus 254 ~r~LkpGG~lvl~~i~~~~~~~~-----------~-------------~~~i~~yifp~g~lps~~~i~~~~~-~~-~~v 307 (383)
T PRK11705 254 RRCLKPDGLFLLHTIGSNKTDTN-----------V-------------DPWINKYIFPNGCLPSVRQIAQASE-GL-FVM 307 (383)
T ss_pred HHHcCCCcEEEEEEccCCCCCCC-----------C-------------CCCceeeecCCCcCCCHHHHHHHHH-CC-cEE
Confidence 99999999999998877642100 0 01123345563 6899999999877 45 888
Q ss_pred eeEEEEeeccCCCCcccchhhhHhhhHHHhhhh--HHHhhcCCCcchHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Q 017747 289 DQLDMFQVERQGHDRGESYGSAVARTVRAIQES--TIIHHFGIGEGVLDNLFEIYGRLVDEEMAKEEIKPLTFVL 361 (366)
Q Consensus 289 ~~~e~~~~~~~~~~d~~~~~~~~~~~~Ra~~e~--~l~~~~g~~~~i~d~lf~r~~~~~~~~~~~~~~~~~~~~~ 361 (366)
.+++.+... |+.++..|.+.|-.. -+..-+| ++ .-.++.-|-.-.+..++........+++
T Consensus 308 ~d~~~~~~h---------y~~TL~~W~~~f~~~~~~~~~~~~--~~-~~r~w~~yl~~~~~~F~~~~~~~~q~~~ 370 (383)
T PRK11705 308 EDWHNFGAD---------YDRTLMAWHENFEAAWPELADNYS--ER-FYRMWRYYLLSCAGAFRARDIQLWQVVF 370 (383)
T ss_pred EEEecChhh---------HHHHHHHHHHHHHHHHHHHHHhCC--HH-HHHHHHHHHHHHHHHHhCCCceEEEEEE
Confidence 666543221 444555554444432 1223344 33 2334555666666666666555555433
|
|
| >PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=98.71 E-value=1.7e-07 Score=86.43 Aligned_cols=169 Identities=18% Similarity=0.191 Sum_probs=96.0
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceE
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVY 130 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 130 (366)
..+|+|+|||+|..+..+ .+. + ++..+++..|+..+.....-+.+.. .+.. ....|
T Consensus 52 ~~~vldiG~G~G~~~~~l--------~~~-----~--~~~~~v~~~D~s~~~~~~a~~~~~~--------~~~~-~~~~~ 107 (239)
T PRK00216 52 GDKVLDLACGTGDLAIAL--------AKA-----V--GKTGEVVGLDFSEGMLAVGREKLRD--------LGLS-GNVEF 107 (239)
T ss_pred CCeEEEeCCCCCHHHHHH--------HHH-----c--CCCCeEEEEeCCHHHHHHHHHhhcc--------cccc-cCeEE
Confidence 479999999999988753 222 1 1247899999865432222211110 0000 11123
Q ss_pred EeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 017747 131 IAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRS 210 (366)
Q Consensus 131 ~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra 210 (366)
.. +++.+..++++++|++++++.+|++++.+ .+|+...
T Consensus 108 ~~---~d~~~~~~~~~~~D~I~~~~~l~~~~~~~---------------------------------------~~l~~~~ 145 (239)
T PRK00216 108 VQ---GDAEALPFPDNSFDAVTIAFGLRNVPDID---------------------------------------KALREMY 145 (239)
T ss_pred Ee---cccccCCCCCCCccEEEEecccccCCCHH---------------------------------------HHHHHHH
Confidence 33 46655557788999999999999875522 2355667
Q ss_pred HHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHH--------HHHHcCccchhhhcc-cCccccCCCHHHHHHHHh
Q 017747 211 EELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLA--------ILVSQGEIEKEKLVA-YHAHFYAPSKEEIEGEVG 281 (366)
Q Consensus 211 ~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~--------~mv~eG~i~~e~~d~-f~~P~y~ps~eEv~~~i~ 281 (366)
+-|+|||++++.-........ +..+...+. .+..... +..+. .+.-..+++.+++...++
T Consensus 146 ~~L~~gG~li~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~ 214 (239)
T PRK00216 146 RVLKPGGRLVILEFSKPTNPP--------LKKAYDFYLFKVLPLIGKLISKNA---EAYSYLAESIRAFPDQEELAAMLE 214 (239)
T ss_pred HhccCCcEEEEEEecCCCchH--------HHHHHHHHHHhhhHHHHHHHcCCc---HHHHHHHHHHHhCCCHHHHHHHHH
Confidence 889999999887655433210 111111111 1111110 00000 011124679999999999
Q ss_pred hcCceEEeeEEEEeec
Q 017747 282 REGSFKLDQLDMFQVE 297 (366)
Q Consensus 282 ~~gsf~i~~~e~~~~~ 297 (366)
+.| |++.+...+.-.
T Consensus 215 ~aG-f~~~~~~~~~~~ 229 (239)
T PRK00216 215 EAG-FERVRYRNLTGG 229 (239)
T ss_pred hCC-CceeeeeeeecC
Confidence 999 888777665433
|
|
| >PLN02490 MPBQ/MSBQ methyltransferase | Back alignment and domain information |
|---|
Probab=98.65 E-value=9.6e-08 Score=94.23 Aligned_cols=149 Identities=21% Similarity=0.243 Sum_probs=92.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++.+ .+. .+..+++..|+..+.....-+... ..++
T Consensus 113 ~~~~VLDLGcGtG~~~l~L--------a~~--------~~~~~VtgVD~S~~mL~~A~~k~~--------------~~~i 162 (340)
T PLN02490 113 RNLKVVDVGGGTGFTTLGI--------VKH--------VDAKNVTILDQSPHQLAKAKQKEP--------------LKEC 162 (340)
T ss_pred CCCEEEEEecCCcHHHHHH--------HHH--------CCCCEEEEEECCHHHHHHHHHhhh--------------ccCC
Confidence 3579999999999988642 221 122688999986654333222111 0111
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
..+.++..+.-++++++|+++++.++|++.+.. ..|+.-
T Consensus 163 --~~i~gD~e~lp~~~~sFDvVIs~~~L~~~~d~~---------------------------------------~~L~e~ 201 (340)
T PLN02490 163 --KIIEGDAEDLPFPTDYADRYVSAGSIEYWPDPQ---------------------------------------RGIKEA 201 (340)
T ss_pred --eEEeccHHhCCCCCCceeEEEEcChhhhCCCHH---------------------------------------HHHHHH
Confidence 113456655557899999999999999855411 135566
Q ss_pred HHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEe
Q 017747 210 SEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLD 289 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~ 289 (366)
.+-|+|||++++.-....+ .| +..-+.+ .-..+++.+|+.+.+++.| |+..
T Consensus 202 ~rvLkPGG~LvIi~~~~p~----------~~--~~r~~~~----------------~~~~~~t~eEl~~lL~~aG-F~~V 252 (340)
T PLN02490 202 YRVLKIGGKACLIGPVHPT----------FW--LSRFFAD----------------VWMLFPKEEEYIEWFTKAG-FKDV 252 (340)
T ss_pred HHhcCCCcEEEEEEecCcc----------hh--HHHHhhh----------------hhccCCCHHHHHHHHHHCC-CeEE
Confidence 8999999999886322111 00 1111111 0113579999999999999 9887
Q ss_pred eEEEEeecc
Q 017747 290 QLDMFQVER 298 (366)
Q Consensus 290 ~~e~~~~~~ 298 (366)
+++.+...|
T Consensus 253 ~i~~i~~~~ 261 (340)
T PLN02490 253 KLKRIGPKW 261 (340)
T ss_pred EEEEcChhh
Confidence 776654444
|
|
| >PRK11207 tellurite resistance protein TehB; Provisional | Back alignment and domain information |
|---|
Probab=98.64 E-value=2.7e-07 Score=84.18 Aligned_cols=138 Identities=14% Similarity=0.185 Sum_probs=81.7
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceE
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVY 130 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 130 (366)
+.+|+|+|||+|.+++.+ .++ ..+|+.-|+..+.-..+-+.. ...+ ..++
T Consensus 31 ~~~vLDiGcG~G~~a~~L--------a~~----------g~~V~gvD~S~~~i~~a~~~~--------~~~~---~~~v- 80 (197)
T PRK11207 31 PGKTLDLGCGNGRNSLYL--------AAN----------GFDVTAWDKNPMSIANLERIK--------AAEN---LDNL- 80 (197)
T ss_pred CCcEEEECCCCCHHHHHH--------HHC----------CCEEEEEeCCHHHHHHHHHHH--------HHcC---CCcc-
Confidence 579999999999999753 221 167888898654222111111 1111 1111
Q ss_pred EeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 017747 131 IAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRS 210 (366)
Q Consensus 131 ~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra 210 (366)
..+..++.+ +-+++++|+++|+.++||++. .|...+++.-+
T Consensus 81 -~~~~~d~~~-~~~~~~fD~I~~~~~~~~~~~-------------------------------------~~~~~~l~~i~ 121 (197)
T PRK11207 81 -HTAVVDLNN-LTFDGEYDFILSTVVLMFLEA-------------------------------------KTIPGLIANMQ 121 (197)
T ss_pred -eEEecChhh-CCcCCCcCEEEEecchhhCCH-------------------------------------HHHHHHHHHHH
Confidence 112234432 223567999999999999742 13445677778
Q ss_pred HHhccCceEEEE-eecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEe
Q 017747 211 EELVVGGRMVLI-LLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLD 289 (366)
Q Consensus 211 ~EL~~GG~lvl~-~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~ 289 (366)
+-|+|||++++. .+...+. +. .. -|-+..+++|+.+.++ | |++.
T Consensus 122 ~~LkpgG~~~~~~~~~~~~~-~~-------------------~~------------~~~~~~~~~el~~~~~--~-~~~~ 166 (197)
T PRK11207 122 RCTKPGGYNLIVAAMDTADY-PC-------------------TV------------GFPFAFKEGELRRYYE--G-WEMV 166 (197)
T ss_pred HHcCCCcEEEEEEEecCCCC-CC-------------------CC------------CCCCccCHHHHHHHhC--C-CeEE
Confidence 999999996554 3332211 00 01 1235578899998887 6 8876
Q ss_pred eEE
Q 017747 290 QLD 292 (366)
Q Consensus 290 ~~e 292 (366)
+.+
T Consensus 167 ~~~ 169 (197)
T PRK11207 167 KYN 169 (197)
T ss_pred Eee
Confidence 653
|
|
| >TIGR00452 methyltransferase, putative | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.8e-07 Score=91.37 Aligned_cols=153 Identities=19% Similarity=0.212 Sum_probs=89.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
+..+|+|+|||+|..+..+ ... .+ -.|+.-|.......+ |+.... ..+. ...+
T Consensus 121 ~g~~VLDvGCG~G~~~~~~--------~~~--------g~-~~v~GiDpS~~ml~q-~~~~~~-------~~~~--~~~v 173 (314)
T TIGR00452 121 KGRTILDVGCGSGYHMWRM--------LGH--------GA-KSLVGIDPTVLFLCQ-FEAVRK-------LLDN--DKRA 173 (314)
T ss_pred CCCEEEEeccCCcHHHHHH--------HHc--------CC-CEEEEEcCCHHHHHH-HHHHHH-------Hhcc--CCCe
Confidence 3479999999999987542 111 12 357888865432221 211110 0000 1122
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
.+ .++++ +.+-+.+++|+++|+.++||+.+ |. .+|+.-
T Consensus 174 ~~--~~~~i-e~lp~~~~FD~V~s~gvL~H~~d-p~--------------------------------------~~L~el 211 (314)
T TIGR00452 174 IL--EPLGI-EQLHELYAFDTVFSMGVLYHRKS-PL--------------------------------------EHLKQL 211 (314)
T ss_pred EE--EECCH-HHCCCCCCcCEEEEcchhhccCC-HH--------------------------------------HHHHHH
Confidence 11 22343 45545568999999999999644 21 235667
Q ss_pred HHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEe
Q 017747 210 SEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLD 289 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~ 289 (366)
++-|+|||.|++..+..+..... . + ...+.+..+...++.||.+++...+++.| |+..
T Consensus 212 ~r~LkpGG~Lvletl~i~g~~~~-----~----l------------~p~~ry~k~~nv~flpS~~~L~~~L~~aG-F~~V 269 (314)
T TIGR00452 212 KHQLVIKGELVLETLVIDGDLNT-----V----L------------VPKDRYAKMKNVYFIPSVSALKNWLEKVG-FENF 269 (314)
T ss_pred HHhcCCCCEEEEEEEEecCcccc-----c----c------------CchHHHHhccccccCCCHHHHHHHHHHCC-CeEE
Confidence 89999999999987644321100 0 0 00111222344567799999999999999 8875
Q ss_pred eEEE
Q 017747 290 QLDM 293 (366)
Q Consensus 290 ~~e~ 293 (366)
++..
T Consensus 270 ~i~~ 273 (314)
T TIGR00452 270 RILD 273 (314)
T ss_pred EEEe
Confidence 5443
|
Known examples to date are restricted to the proteobacteria. |
| >TIGR01934 MenG_MenH_UbiE ubiquinone/menaquinone biosynthesis methyltransferases | Back alignment and domain information |
|---|
Probab=98.60 E-value=7.3e-07 Score=81.37 Aligned_cols=167 Identities=18% Similarity=0.200 Sum_probs=94.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+. +. . +...+++..|+........-+.+. .. .+-.
T Consensus 39 ~~~~vldiG~G~G~~~~~~~--------~~-----~--~~~~~~~~iD~~~~~~~~~~~~~~-----------~~-~~i~ 91 (223)
T TIGR01934 39 KGQKVLDVACGTGDLAIELA--------KS-----A--PDRGKVTGVDFSSEMLEVAKKKSE-----------LP-LNIE 91 (223)
T ss_pred CCCeEEEeCCCCChhHHHHH--------Hh-----c--CCCceEEEEECCHHHHHHHHHHhc-----------cC-CCce
Confidence 46899999999999886532 21 1 112688888975422221111111 00 1112
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
+.. +++.+..++++++|+++++..+|+..+. ..+|+..
T Consensus 92 ~~~---~d~~~~~~~~~~~D~i~~~~~~~~~~~~---------------------------------------~~~l~~~ 129 (223)
T TIGR01934 92 FIQ---ADAEALPFEDNSFDAVTIAFGLRNVTDI---------------------------------------QKALREM 129 (223)
T ss_pred EEe---cchhcCCCCCCcEEEEEEeeeeCCcccH---------------------------------------HHHHHHH
Confidence 332 4666656788899999999999885431 2346677
Q ss_pred HHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHH---cCccchhhhcccC----ccccCCCHHHHHHHHhh
Q 017747 210 SEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVS---QGEIEKEKLVAYH----AHFYAPSKEEIEGEVGR 282 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~---eG~i~~e~~d~f~----~P~y~ps~eEv~~~i~~ 282 (366)
.+.|+|||++++.-.-..... .+..+.+.+..... .+..... .+.+. ....+++.+|++.++++
T Consensus 130 ~~~L~~gG~l~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~ 200 (223)
T TIGR01934 130 YRVLKPGGRLVILEFSKPANA--------LLKKFYKFYLKNVLPSIGGLISKN-AEAYTYLPESIRAFPSQEELAAMLKE 200 (223)
T ss_pred HHHcCCCcEEEEEEecCCCch--------hhHHHHHHHHHHhhhhhhhhhcCC-chhhHHHHHHHHhCCCHHHHHHHHHH
Confidence 899999999998654332211 11112222221110 0111101 11111 11236799999999999
Q ss_pred cCceEEeeEEEEe
Q 017747 283 EGSFKLDQLDMFQ 295 (366)
Q Consensus 283 ~gsf~i~~~e~~~ 295 (366)
.| |++...+.+.
T Consensus 201 aG-f~~~~~~~~~ 212 (223)
T TIGR01934 201 AG-FEEVRYRSLT 212 (223)
T ss_pred cC-Cccceeeeee
Confidence 99 8887666543
|
Note that a number of non-orthologous genes which are members of pfam03737 have been erroneously annotated as MenG methyltransferases. |
| >smart00828 PKS_MT Methyltransferase in polyketide synthase (PKS) enzymes | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.1e-06 Score=80.90 Aligned_cols=146 Identities=13% Similarity=0.141 Sum_probs=89.0
Q ss_pred EEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceEEe
Q 017747 53 NIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVYIA 132 (366)
Q Consensus 53 ~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~~ 132 (366)
+|+|+|||+|..+.. +.+. .|..+++..|+..+.....-+.+. ..|.. ..--+..
T Consensus 2 ~vLDiGcG~G~~~~~--------la~~--------~~~~~v~gid~s~~~~~~a~~~~~--------~~gl~-~~i~~~~ 56 (224)
T smart00828 2 RVLDFGCGYGSDLID--------LAER--------HPHLQLHGYTISPEQAEVGRERIR--------ALGLQ-GRIRIFY 56 (224)
T ss_pred eEEEECCCCCHHHHH--------HHHH--------CCCCEEEEEECCHHHHHHHHHHHH--------hcCCC-cceEEEe
Confidence 699999999998764 2222 133678888985543322222111 11111 1112222
Q ss_pred ccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017747 133 GYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEE 212 (366)
Q Consensus 133 ~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~E 212 (366)
+++....+ ++++|+++|..++|++.+ +..+|+.-++-
T Consensus 57 ---~d~~~~~~-~~~fD~I~~~~~l~~~~~---------------------------------------~~~~l~~~~~~ 93 (224)
T smart00828 57 ---RDSAKDPF-PDTYDLVFGFEVIHHIKD---------------------------------------KMDLFSNISRH 93 (224)
T ss_pred ---cccccCCC-CCCCCEeehHHHHHhCCC---------------------------------------HHHHHHHHHHH
Confidence 34433334 458999999999999643 22456677899
Q ss_pred hccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEeeEE
Q 017747 213 LVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLD 292 (366)
Q Consensus 213 L~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~~~e 292 (366)
|+|||++++.-+..+... + . ..-..+.|+++.+++.+.+++.| |++.+.+
T Consensus 94 LkpgG~l~i~~~~~~~~~-----------------------~-~-----~~~~~~~~~~s~~~~~~~l~~~G-f~~~~~~ 143 (224)
T smart00828 94 LKDGGHLVLADFIANLLS-----------------------A-I-----EHEETTSYLVTREEWAELLARNN-LRVVEGV 143 (224)
T ss_pred cCCCCEEEEEEcccccCc-----------------------c-c-----cccccccccCCHHHHHHHHHHCC-CeEEEeE
Confidence 999999999855322100 0 0 00123456899999999999999 9987776
Q ss_pred EEee
Q 017747 293 MFQV 296 (366)
Q Consensus 293 ~~~~ 296 (366)
.+..
T Consensus 144 ~~~~ 147 (224)
T smart00828 144 DASL 147 (224)
T ss_pred ECcH
Confidence 6543
|
|
| >KOG2940 consensus Predicted methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.53 E-value=2.4e-07 Score=85.49 Aligned_cols=152 Identities=24% Similarity=0.309 Sum_probs=99.1
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceE
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVY 130 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 130 (366)
.-.++|+|||-|+.+..+ +.. . --+++..|.... +.+++...+ +++....|
T Consensus 73 fp~a~diGcs~G~v~rhl--------~~e--------~-vekli~~DtS~~----------M~~s~~~~q--dp~i~~~~ 123 (325)
T KOG2940|consen 73 FPTAFDIGCSLGAVKRHL--------RGE--------G-VEKLIMMDTSYD----------MIKSCRDAQ--DPSIETSY 123 (325)
T ss_pred CcceeecccchhhhhHHH--------Hhc--------c-hhheeeeecchH----------HHHHhhccC--CCceEEEE
Confidence 356899999999987643 221 1 145677777653 222222111 00011223
Q ss_pred EeccCCCccccc-CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 131 IAGYPGSFYGRL-FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 131 ~~~vpgSFy~~l-fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
..+ + .+.| |-++|+|+++||.++||.+++|... ..+
T Consensus 124 ~v~---D-EE~Ldf~ens~DLiisSlslHW~NdLPg~m---------------------------------------~~c 160 (325)
T KOG2940|consen 124 FVG---D-EEFLDFKENSVDLIISSLSLHWTNDLPGSM---------------------------------------IQC 160 (325)
T ss_pred Eec---c-hhcccccccchhhhhhhhhhhhhccCchHH---------------------------------------HHH
Confidence 332 2 2555 8999999999999999999999754 345
Q ss_pred HHHhccCceEEEEeecCCCCCCCCCCchhHHH-HHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEE
Q 017747 210 SEELVVGGRMVLILLGRIGPDHVDRGNSFFWE-LLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKL 288 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~-~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i 288 (366)
...|||.|.++-+++|-++ +++ ..+-.|.+|-.+|-|+.- ..| |-...++-.++..+| |..
T Consensus 161 k~~lKPDg~FiasmlggdT----------LyELR~slqLAelER~GGiSph-----iSP--f~qvrDiG~LL~rAG-F~m 222 (325)
T KOG2940|consen 161 KLALKPDGLFIASMLGGDT----------LYELRCSLQLAELEREGGISPH-----ISP--FTQVRDIGNLLTRAG-FSM 222 (325)
T ss_pred HHhcCCCccchhHHhcccc----------HHHHHHHhhHHHHHhccCCCCC-----cCh--hhhhhhhhhHHhhcC-ccc
Confidence 7889999999999999876 454 245556777777755442 222 335678888999999 876
Q ss_pred eeEE
Q 017747 289 DQLD 292 (366)
Q Consensus 289 ~~~e 292 (366)
..+.
T Consensus 223 ~tvD 226 (325)
T KOG2940|consen 223 LTVD 226 (325)
T ss_pred ceec
Confidence 5544
|
|
| >PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=98.52 E-value=4.8e-07 Score=86.17 Aligned_cols=153 Identities=16% Similarity=0.142 Sum_probs=88.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++.+...+ .+..+|+..|...+.....-+... ..+ ..++
T Consensus 77 ~g~~VLDiG~G~G~~~~~~a~~~---------------g~~~~v~gvD~s~~~l~~A~~~~~--------~~g---~~~v 130 (272)
T PRK11873 77 PGETVLDLGSGGGFDCFLAARRV---------------GPTGKVIGVDMTPEMLAKARANAR--------KAG---YTNV 130 (272)
T ss_pred CCCEEEEeCCCCCHHHHHHHHHh---------------CCCCEEEEECCCHHHHHHHHHHHH--------HcC---CCCE
Confidence 35799999999998776422111 233689999986543332221110 111 1122
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
..+.+++.+-.+|++++|+++|+.++||..+.+. .|+.-
T Consensus 131 --~~~~~d~~~l~~~~~~fD~Vi~~~v~~~~~d~~~---------------------------------------~l~~~ 169 (272)
T PRK11873 131 --EFRLGEIEALPVADNSVDVIISNCVINLSPDKER---------------------------------------VFKEA 169 (272)
T ss_pred --EEEEcchhhCCCCCCceeEEEEcCcccCCCCHHH---------------------------------------HHHHH
Confidence 1222465443478889999999999999543221 23445
Q ss_pred HHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEe
Q 017747 210 SEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLD 289 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~ 289 (366)
.+-|+|||++++.-+..... +.+.+...+.-+ .| ......+.+|+.+.+++.| |...
T Consensus 170 ~r~LkpGG~l~i~~~~~~~~---------~~~~~~~~~~~~--~~-----------~~~~~~~~~e~~~~l~~aG-f~~v 226 (272)
T PRK11873 170 FRVLKPGGRFAISDVVLRGE---------LPEEIRNDAELY--AG-----------CVAGALQEEEYLAMLAEAG-FVDI 226 (272)
T ss_pred HHHcCCCcEEEEEEeeccCC---------CCHHHHHhHHHH--hc-----------cccCCCCHHHHHHHHHHCC-CCce
Confidence 78899999999975433221 111122222211 11 1113457899999999999 7765
Q ss_pred eEE
Q 017747 290 QLD 292 (366)
Q Consensus 290 ~~e 292 (366)
++.
T Consensus 227 ~i~ 229 (272)
T PRK11873 227 TIQ 229 (272)
T ss_pred EEE
Confidence 543
|
|
| >PF08242 Methyltransf_12: Methyltransferase domain; InterPro: IPR013217 Methyl transfer from the ubiquitous donor S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals | Back alignment and domain information |
|---|
Probab=98.44 E-value=1.5e-07 Score=75.57 Aligned_cols=99 Identities=21% Similarity=0.283 Sum_probs=49.6
Q ss_pred EeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceEEecc
Q 017747 55 ADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVYIAGY 134 (366)
Q Consensus 55 aDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~~~v 134 (366)
+|+|||+|..+.. +.+. .|..+++..|.........-+.+.... . .....+...
T Consensus 1 LdiGcG~G~~~~~--------l~~~--------~~~~~~~~~D~s~~~l~~a~~~~~~~~--------~--~~~~~~~~~ 54 (99)
T PF08242_consen 1 LDIGCGTGRLLRA--------LLEE--------LPDARYTGVDISPSMLERARERLAELG--------N--DNFERLRFD 54 (99)
T ss_dssp -EESTTTS-TTTT--------HHHH--------C-EEEEEEEESSSSTTSTTCCCHHHCT-------------EEEEE--
T ss_pred CEeCccChHHHHH--------HHHh--------CCCCEEEEEECCHHHHHHHHHHhhhcC--------C--cceeEEEee
Confidence 6999999999975 3332 144999999998875533322222110 0 011122222
Q ss_pred CCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 017747 135 PGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELV 214 (366)
Q Consensus 135 pgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 214 (366)
..+... ..+.+++|+++++.++||+. |+..+|+.-++-|+
T Consensus 55 ~~~~~~-~~~~~~fD~V~~~~vl~~l~---------------------------------------~~~~~l~~~~~~L~ 94 (99)
T PF08242_consen 55 VLDLFD-YDPPESFDLVVASNVLHHLE---------------------------------------DIEAVLRNIYRLLK 94 (99)
T ss_dssp SSS----CCC----SEEEEE-TTS--S----------------------------------------HHHHHHHHTTT-T
T ss_pred cCChhh-cccccccceehhhhhHhhhh---------------------------------------hHHHHHHHHHHHcC
Confidence 222211 22337999999999999982 23345677789999
Q ss_pred cCceE
Q 017747 215 VGGRM 219 (366)
Q Consensus 215 ~GG~l 219 (366)
|||+|
T Consensus 95 pgG~l 99 (99)
T PF08242_consen 95 PGGIL 99 (99)
T ss_dssp SS-EE
T ss_pred CCCCC
Confidence 99986
|
The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] Fatty acid synthase (2.3.1.85 from EC), a biosynthetic enzyme catalysing the formation of long-chain fatty acids Glycine N-methyltransferase (2.1.1.20 from EC) which catalyses the SAM-dependent methylation of glycine to form sarcosine and may play a role in regulating the methylation potential of the cell [] Enniatin synthetase, involved in non-ribosomal biosynthesis of cyclohexadepsipeptidase, enniatin [] Histamine N-methyltransferase (2.1.1.8 from EC), a SAM-dependent histamine-inactivating enzyme [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ].; PDB: 2VZ8_A 2VZ9_A. |
| >PRK12335 tellurite resistance protein TehB; Provisional | Back alignment and domain information |
|---|
Probab=98.41 E-value=1.1e-06 Score=84.69 Aligned_cols=137 Identities=14% Similarity=0.199 Sum_probs=83.3
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceE
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVY 130 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 130 (366)
+-+|+|+|||+|.|++.+ .+. ..+|+.-|.....-..+-+. ... .+ . ++
T Consensus 121 ~~~vLDlGcG~G~~~~~l--------a~~----------g~~V~avD~s~~ai~~~~~~-------~~~-~~---l-~v- 169 (287)
T PRK12335 121 PGKALDLGCGQGRNSLYL--------ALL----------GFDVTAVDINQQSLENLQEI-------AEK-EN---L-NI- 169 (287)
T ss_pred CCCEEEeCCCCCHHHHHH--------HHC----------CCEEEEEECCHHHHHHHHHH-------HHH-cC---C-ce-
Confidence 459999999999999753 111 16888889865432222111 111 11 1 11
Q ss_pred EeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 017747 131 IAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRS 210 (366)
Q Consensus 131 ~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra 210 (366)
..+..+... .-+++++|+++|+.++|+++. .++..+|+.-.
T Consensus 170 -~~~~~D~~~-~~~~~~fD~I~~~~vl~~l~~-------------------------------------~~~~~~l~~~~ 210 (287)
T PRK12335 170 -RTGLYDINS-ASIQEEYDFILSTVVLMFLNR-------------------------------------ERIPAIIKNMQ 210 (287)
T ss_pred -EEEEechhc-ccccCCccEEEEcchhhhCCH-------------------------------------HHHHHHHHHHH
Confidence 111123322 223789999999999999742 24556678889
Q ss_pred HHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCcc-ccCCCHHHHHHHHhhcCceEEe
Q 017747 211 EELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAH-FYAPSKEEIEGEVGREGSFKLD 289 (366)
Q Consensus 211 ~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P-~y~ps~eEv~~~i~~~gsf~i~ 289 (366)
+-|+|||++++...-..+..+ ...| -+..+++|+++.+.. |+|.
T Consensus 211 ~~LkpgG~~l~v~~~~~~~~~--------------------------------~~~p~~~~~~~~el~~~~~~---~~i~ 255 (287)
T PRK12335 211 EHTNPGGYNLIVCAMDTEDYP--------------------------------CPMPFSFTFKEGELKDYYQD---WEIV 255 (287)
T ss_pred HhcCCCcEEEEEEecccccCC--------------------------------CCCCCCcccCHHHHHHHhCC---CEEE
Confidence 999999997775432221100 1123 356789999998863 8887
Q ss_pred eEE
Q 017747 290 QLD 292 (366)
Q Consensus 290 ~~e 292 (366)
+.+
T Consensus 256 ~~~ 258 (287)
T PRK12335 256 KYN 258 (287)
T ss_pred EEe
Confidence 664
|
|
| >TIGR00477 tehB tellurite resistance protein TehB | Back alignment and domain information |
|---|
Probab=98.40 E-value=5.5e-07 Score=81.97 Aligned_cols=139 Identities=15% Similarity=0.182 Sum_probs=82.1
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
.+.+|+|+|||+|.+++.+ .++ ..+|+.-|+..+.-..+-+.. .. .+ ..-.
T Consensus 30 ~~~~vLDiGcG~G~~a~~l--------a~~----------g~~V~~iD~s~~~l~~a~~~~-------~~-~~---~~v~ 80 (195)
T TIGR00477 30 APCKTLDLGCGQGRNSLYL--------SLA----------GYDVRAWDHNPASIASVLDMK-------AR-EN---LPLR 80 (195)
T ss_pred CCCcEEEeCCCCCHHHHHH--------HHC----------CCeEEEEECCHHHHHHHHHHH-------HH-hC---CCce
Confidence 3579999999999999753 221 167899998754333222111 00 01 1111
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
+.. .+. ...-+++++|+++|+.++||++. .++..+++.-
T Consensus 81 ~~~---~d~-~~~~~~~~fD~I~~~~~~~~~~~-------------------------------------~~~~~~l~~~ 119 (195)
T TIGR00477 81 TDA---YDI-NAAALNEDYDFIFSTVVFMFLQA-------------------------------------GRVPEIIANM 119 (195)
T ss_pred eEe---ccc-hhccccCCCCEEEEecccccCCH-------------------------------------HHHHHHHHHH
Confidence 111 222 12223468999999999999743 2344567777
Q ss_pred HHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEe
Q 017747 210 SEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLD 289 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~ 289 (366)
++-|+|||++++...-..+..+ .| ..|-|..+++|+++.++ + |++.
T Consensus 120 ~~~LkpgG~lli~~~~~~~~~~---------------------~~----------~~~~~~~~~~el~~~f~--~-~~~~ 165 (195)
T TIGR00477 120 QAHTRPGGYNLIVAAMDTADYP---------------------CH----------MPFSFTFKEDELRQYYA--D-WELL 165 (195)
T ss_pred HHHhCCCcEEEEEEecccCCCC---------------------CC----------CCcCccCCHHHHHHHhC--C-CeEE
Confidence 8999999996654322211100 01 11235688999999886 3 8876
Q ss_pred eEE
Q 017747 290 QLD 292 (366)
Q Consensus 290 ~~e 292 (366)
+.+
T Consensus 166 ~~~ 168 (195)
T TIGR00477 166 KYN 168 (195)
T ss_pred Eee
Confidence 665
|
Part of a tellurite-reducing operon tehA and tehB |
| >PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=98.39 E-value=7.6e-07 Score=81.52 Aligned_cols=139 Identities=16% Similarity=0.167 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhcCCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCch
Q 017747 24 LQKKASDTVKHITLEALQQLYLEIDPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDF 103 (366)
Q Consensus 24 ~Q~~~~~~~~~~l~~ai~~l~~~~~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDF 103 (366)
+|+.+.....|.+-.....+..-......+|+|+|||+|..+..+ .+. .|..+++..|......
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VLDiGcGtG~~~~~l--------a~~--------~p~~~v~gVD~s~~~i 77 (202)
T PRK00121 14 GQQRAIEELWPRLSPAPLDWAELFGNDAPIHLEIGFGKGEFLVEM--------AKA--------NPDINFIGIEVHEPGV 77 (202)
T ss_pred chhhhhcccchhhcCCCCCHHHHcCCCCCeEEEEccCCCHHHHHH--------HHH--------CCCccEEEEEechHHH
Confidence 455555555566533322221111224679999999999998752 222 2347899999876443
Q ss_pred hHHHhhCchhHHHHhhhcCCCCCCce-EEeccCCCc---ccccCCCCcccEEEcccccccccCCCCcccccccCCCcccc
Q 017747 104 NSVFKALPDFHRQLRNERGGGSSPSV-YIAGYPGSF---YGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGN 179 (366)
Q Consensus 104 n~lf~~l~~~~~~~~~~~~~~~~~~~-f~~~vpgSF---y~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~ 179 (366)
..+-+.+. . .+ ..++ ++. ++. +.+.++++++|.+++++..+|.... ....
T Consensus 78 ~~a~~~~~-------~-~~---~~~v~~~~---~d~~~~l~~~~~~~~~D~V~~~~~~p~~~~~-~~~~----------- 131 (202)
T PRK00121 78 GKALKKIE-------E-EG---LTNLRLLC---GDAVEVLLDMFPDGSLDRIYLNFPDPWPKKR-HHKR----------- 131 (202)
T ss_pred HHHHHHHH-------H-cC---CCCEEEEe---cCHHHHHHHHcCccccceEEEECCCCCCCcc-cccc-----------
Confidence 33332211 0 01 2233 333 344 2344788999999999888885531 1100
Q ss_pred EEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEEEe
Q 017747 180 IYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLIL 223 (366)
Q Consensus 180 i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~lvl~~ 223 (366)
..+...||+.-++-|+|||++++..
T Consensus 132 -------------------~~~~~~~l~~i~~~LkpgG~l~i~~ 156 (202)
T PRK00121 132 -------------------RLVQPEFLALYARKLKPGGEIHFAT 156 (202)
T ss_pred -------------------ccCCHHHHHHHHHHcCCCCEEEEEc
Confidence 0123456777789999999999976
|
|
| >PRK05785 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.39 E-value=1.6e-06 Score=80.94 Aligned_cols=76 Identities=17% Similarity=0.207 Sum_probs=51.2
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceE
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVY 130 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 130 (366)
+.+|+|+|||||.++.. +.++ . ..+|+.-|+..++-...- . . .-+
T Consensus 52 ~~~VLDlGcGtG~~~~~--------l~~~--------~-~~~v~gvD~S~~Ml~~a~-----------~------~-~~~ 96 (226)
T PRK05785 52 PKKVLDVAAGKGELSYH--------FKKV--------F-KYYVVALDYAENMLKMNL-----------V------A-DDK 96 (226)
T ss_pred CCeEEEEcCCCCHHHHH--------HHHh--------c-CCEEEEECCCHHHHHHHH-----------h------c-cce
Confidence 67999999999998764 3222 1 158999998765322211 0 0 012
Q ss_pred EeccCCCcccccCCCCcccEEEcccccccccCCC
Q 017747 131 IAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVP 164 (366)
Q Consensus 131 ~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p 164 (366)
+ -+++....||++|+|+++|++++||+.+.+
T Consensus 97 ~---~~d~~~lp~~d~sfD~v~~~~~l~~~~d~~ 127 (226)
T PRK05785 97 V---VGSFEALPFRDKSFDVVMSSFALHASDNIE 127 (226)
T ss_pred E---EechhhCCCCCCCEEEEEecChhhccCCHH
Confidence 2 246655558999999999999999976643
|
|
| >TIGR02716 C20_methyl_CrtF C-20 methyltransferase BchU | Back alignment and domain information |
|---|
Probab=98.37 E-value=1.2e-05 Score=78.14 Aligned_cols=155 Identities=16% Similarity=0.209 Sum_probs=87.3
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
....+|+|+|||+|..++. +.++ .|..+++.-|+|. .....-+ .. ...+. ..+
T Consensus 148 ~~~~~vlDiG~G~G~~~~~--------~~~~--------~p~~~~~~~D~~~-~~~~a~~-------~~-~~~gl--~~r 200 (306)
T TIGR02716 148 DGVKKMIDVGGGIGDISAA--------MLKH--------FPELDSTILNLPG-AIDLVNE-------NA-AEKGV--ADR 200 (306)
T ss_pred CCCCEEEEeCCchhHHHHH--------HHHH--------CCCCEEEEEecHH-HHHHHHH-------HH-HhCCc--cce
Confidence 3457999999999988764 3332 3558888889863 1111111 01 11111 112
Q ss_pred eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
+..++++|++..+|+ .|+++.+..+|-.+. .+-..+|+.
T Consensus 201 --v~~~~~d~~~~~~~~--~D~v~~~~~lh~~~~-------------------------------------~~~~~il~~ 239 (306)
T TIGR02716 201 --MRGIAVDIYKESYPE--ADAVLFCRILYSANE-------------------------------------QLSTIMCKK 239 (306)
T ss_pred --EEEEecCccCCCCCC--CCEEEeEhhhhcCCh-------------------------------------HHHHHHHHH
Confidence 234567998755665 499888888874221 112345677
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEE
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKL 288 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i 288 (366)
-.+-|+|||++++.=.-.++... . .+..+...+.. -|.. ..+..+++.+|+.+++++.| |+.
T Consensus 240 ~~~~L~pgG~l~i~d~~~~~~~~--~----~~~~~~~~~~~---~~~~--------~~~~~~~~~~e~~~ll~~aG-f~~ 301 (306)
T TIGR02716 240 AFDAMRSGGRLLILDMVIDDPEN--P----NFDYLSHYILG---AGMP--------FSVLGFKEQARYKEILESLG-YKD 301 (306)
T ss_pred HHHhcCCCCEEEEEEeccCCCCC--c----hhhHHHHHHHH---cccc--------cccccCCCHHHHHHHHHHcC-CCe
Confidence 78999999999888443322111 0 11112222111 1211 01224566899999999999 864
Q ss_pred e
Q 017747 289 D 289 (366)
Q Consensus 289 ~ 289 (366)
.
T Consensus 302 v 302 (306)
T TIGR02716 302 V 302 (306)
T ss_pred e
Confidence 3
|
Members of this protein family are the S-adenosylmethionine-depenedent C-20 methyltransferase BchU, part of the pathway of bacteriochlorophyll c production in photosynthetic green sulfur bacteria. The position modified by this enzyme represents the difference between bacteriochlorophylls c and d; strains lacking this protein can only produced bacteriochlorophyll d. |
| >PRK06922 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.34 E-value=9.3e-07 Score=93.14 Aligned_cols=116 Identities=26% Similarity=0.253 Sum_probs=74.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
+..+|+|+|||+|..+.. +.+. .|..+++..|++.+.-..+-+.+.. .+ .+..
T Consensus 418 ~g~rVLDIGCGTG~ls~~--------LA~~--------~P~~kVtGIDIS~~MLe~Ararl~~--------~g---~~ie 470 (677)
T PRK06922 418 KGDTIVDVGAGGGVMLDM--------IEEE--------TEDKRIYGIDISENVIDTLKKKKQN--------EG---RSWN 470 (677)
T ss_pred CCCEEEEeCCCCCHHHHH--------HHHh--------CCCCEEEEEECCHHHHHHHHHHhhh--------cC---CCeE
Confidence 357999999999987653 3222 2458999999987544333222110 00 1112
Q ss_pred EEeccCCCccc--ccCCCCcccEEEcccccccc-cCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYG--RLFPNNSLHFIHSSNSLHWL-SKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 130 f~~~vpgSFy~--~lfp~~s~~~~~S~~alhWl-s~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
++.+ +... ..||++++|++++++++||+ +.+|..-. .+| .+|...+|
T Consensus 471 ~I~g---Da~dLp~~fedeSFDvVVsn~vLH~L~syIp~~g~-----~f~----------------------~edl~kiL 520 (677)
T PRK06922 471 VIKG---DAINLSSSFEKESVDTIVYSSILHELFSYIEYEGK-----KFN----------------------HEVIKKGL 520 (677)
T ss_pred EEEc---chHhCccccCCCCEEEEEEchHHHhhhhhcccccc-----ccc----------------------HHHHHHHH
Confidence 3332 3322 23789999999999999975 44442110 000 25778889
Q ss_pred HHHHHHhccCceEEEE
Q 017747 207 RSRSEELVVGGRMVLI 222 (366)
Q Consensus 207 ~~Ra~EL~~GG~lvl~ 222 (366)
+.-.+-|+|||++++.
T Consensus 521 reI~RVLKPGGrLII~ 536 (677)
T PRK06922 521 QSAYEVLKPGGRIIIR 536 (677)
T ss_pred HHHHHHcCCCcEEEEE
Confidence 9999999999999996
|
|
| >TIGR02021 BchM-ChlM magnesium protoporphyrin O-methyltransferase | Back alignment and domain information |
|---|
Probab=98.34 E-value=4.2e-06 Score=77.14 Aligned_cols=30 Identities=17% Similarity=0.346 Sum_probs=25.1
Q ss_pred CccccCCCHHHHHHHHhhcCceEEeeEEEEe
Q 017747 265 HAHFYAPSKEEIEGEVGREGSFKLDQLDMFQ 295 (366)
Q Consensus 265 ~~P~y~ps~eEv~~~i~~~gsf~i~~~e~~~ 295 (366)
..++++++++|+..++++.| |++...+...
T Consensus 179 ~~~~~~~~~~~~~~~l~~~G-f~v~~~~~~~ 208 (219)
T TIGR02021 179 ATSAYLHPMTDLERALGELG-WKIVREGLVS 208 (219)
T ss_pred ccceEEecHHHHHHHHHHcC-ceeeeeeccc
Confidence 35678899999999999999 9998777544
|
This model represents the S-adenosylmethionine-dependent O-methyltransferase responsible for methylation of magnesium protoporphyrin IX. This step is essentiasl for the biosynthesis of both chlorophyll and bacteriochlorophyll. This model encompasses two closely related clades, from cyanobacteria (and plants) where it is called ChlM and other photosynthetic bacteria where it is known as BchM. |
| >PF13847 Methyltransf_31: Methyltransferase domain; PDB: 3T0I_B 3SVZ_B 3SXJ_A 3F4K_A 3GU3_B 2GH1_A 1R8Y_E 1R8X_B 2B3T_A 1T43_A | Back alignment and domain information |
|---|
Probab=98.32 E-value=1.7e-06 Score=75.11 Aligned_cols=107 Identities=21% Similarity=0.294 Sum_probs=68.5
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
+..+|+|+|||+|..+..+.. +. .|..+++..|+....-+..-+.. +..+ ..++
T Consensus 3 ~~~~iLDlGcG~G~~~~~l~~-------~~--------~~~~~i~gvD~s~~~i~~a~~~~--------~~~~---~~ni 56 (152)
T PF13847_consen 3 SNKKILDLGCGTGRLLIQLAK-------EL--------NPGAKIIGVDISEEMIEYAKKRA--------KELG---LDNI 56 (152)
T ss_dssp TTSEEEEET-TTSHHHHHHHH-------HS--------TTTSEEEEEESSHHHHHHHHHHH--------HHTT---STTE
T ss_pred CCCEEEEecCcCcHHHHHHHH-------hc--------CCCCEEEEEECcHHHHHHhhccc--------cccc---cccc
Confidence 468999999999999875322 11 23488999999764333222211 1111 2233
Q ss_pred -EEeccCCCccc--ccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYG--RLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 130 -f~~~vpgSFy~--~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
|.. +++.+ +.++ +.+|++++..++||+... ..+|
T Consensus 57 ~~~~---~d~~~l~~~~~-~~~D~I~~~~~l~~~~~~---------------------------------------~~~l 93 (152)
T PF13847_consen 57 EFIQ---GDIEDLPQELE-EKFDIIISNGVLHHFPDP---------------------------------------EKVL 93 (152)
T ss_dssp EEEE---SBTTCGCGCSS-TTEEEEEEESTGGGTSHH---------------------------------------HHHH
T ss_pred ceEE---eehhccccccC-CCeeEEEEcCchhhccCH---------------------------------------HHHH
Confidence 444 35544 1134 899999999999986552 2234
Q ss_pred HHHHHHhccCceEEEEeec
Q 017747 207 RSRSEELVVGGRMVLILLG 225 (366)
Q Consensus 207 ~~Ra~EL~~GG~lvl~~~g 225 (366)
+.-.+-|++||.+++....
T Consensus 94 ~~~~~~lk~~G~~i~~~~~ 112 (152)
T PF13847_consen 94 KNIIRLLKPGGILIISDPN 112 (152)
T ss_dssp HHHHHHEEEEEEEEEEEEE
T ss_pred HHHHHHcCCCcEEEEEECC
Confidence 5668999999999999876
|
... |
| >TIGR02081 metW methionine biosynthesis protein MetW | Back alignment and domain information |
|---|
Probab=98.26 E-value=4.8e-06 Score=75.44 Aligned_cols=28 Identities=11% Similarity=0.148 Sum_probs=23.7
Q ss_pred cccCCCHHHHHHHHhhcCceEEeeEEEEe
Q 017747 267 HFYAPSKEEIEGEVGREGSFKLDQLDMFQ 295 (366)
Q Consensus 267 P~y~ps~eEv~~~i~~~gsf~i~~~e~~~ 295 (366)
+..+++.+|+.+.+++.| |++.....+.
T Consensus 142 ~~~~~s~~~~~~ll~~~G-f~v~~~~~~~ 169 (194)
T TIGR02081 142 NIHFCTIADFEDLCGELN-LRILDRAAFD 169 (194)
T ss_pred CcccCcHHHHHHHHHHCC-CEEEEEEEec
Confidence 356889999999999999 9998877663
|
This protein is found alongside MetX, of the enzyme that acylates homoserine as a first step toward methionine biosynthesis, in many species. It appears to act in methionine biosynthesis but is not fully characterized. |
| >PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4) | Back alignment and domain information |
|---|
Probab=98.24 E-value=8.1e-05 Score=71.53 Aligned_cols=172 Identities=22% Similarity=0.297 Sum_probs=90.6
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceE
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVY 130 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 130 (366)
-.+|+|+|||-|..++.+ .+++ ..+|....|..+....+-+.+ .+.|. ...+-
T Consensus 63 G~~vLDiGcGwG~~~~~~--------a~~~---------g~~v~gitlS~~Q~~~a~~~~--------~~~gl--~~~v~ 115 (273)
T PF02353_consen 63 GDRVLDIGCGWGGLAIYA--------AERY---------GCHVTGITLSEEQAEYARERI--------REAGL--EDRVE 115 (273)
T ss_dssp T-EEEEES-TTSHHHHHH--------HHHH-----------EEEEEES-HHHHHHHHHHH--------HCSTS--SSTEE
T ss_pred CCEEEEeCCCccHHHHHH--------HHHc---------CcEEEEEECCHHHHHHHHHHH--------HhcCC--CCceE
Confidence 479999999999998753 3322 166777777654322221111 11122 12232
Q ss_pred EeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 017747 131 IAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRS 210 (366)
Q Consensus 131 ~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra 210 (366)
+.- .+| ..+ +. ++|-++|--++.-+ + .+++..|++.-.
T Consensus 116 v~~--~D~-~~~-~~-~fD~IvSi~~~Ehv---g----------------------------------~~~~~~~f~~~~ 153 (273)
T PF02353_consen 116 VRL--QDY-RDL-PG-KFDRIVSIEMFEHV---G----------------------------------RKNYPAFFRKIS 153 (273)
T ss_dssp EEE--S-G-GG-----S-SEEEEESEGGGT---C----------------------------------GGGHHHHHHHHH
T ss_pred EEE--eec-ccc-CC-CCCEEEEEechhhc---C----------------------------------hhHHHHHHHHHH
Confidence 222 244 232 22 88999887776543 1 245678889999
Q ss_pred HHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccc-cCCCHHHHHHHHhhcCceEEe
Q 017747 211 EELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHF-YAPSKEEIEGEVGREGSFKLD 289 (366)
Q Consensus 211 ~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~-y~ps~eEv~~~i~~~gsf~i~ 289 (366)
+-|+|||++++...+..+.. .. ... ..+.+-+....+|- +.||.+|+...+++.| |+|.
T Consensus 154 ~~LkpgG~~~lq~i~~~~~~---------~~-~~~---------~~~~~~i~kyiFPgg~lps~~~~~~~~~~~~-l~v~ 213 (273)
T PF02353_consen 154 RLLKPGGRLVLQTITHRDPP---------YH-AER---------RSSSDFIRKYIFPGGYLPSLSEILRAAEDAG-LEVE 213 (273)
T ss_dssp HHSETTEEEEEEEEEE--HH---------HH-HCT---------TCCCHHHHHHTSTTS---BHHHHHHHHHHTT--EEE
T ss_pred HhcCCCcEEEEEeccccccc---------ch-hhc---------CCCceEEEEeeCCCCCCCCHHHHHHHHhcCC-EEEE
Confidence 99999999999988776531 00 000 00001111223443 5689999999999888 8886
Q ss_pred eEEEEeeccCCCCcccchhhhHhhhHHHhhhhHHH
Q 017747 290 QLDMFQVERQGHDRGESYGSAVARTVRAIQESTII 324 (366)
Q Consensus 290 ~~e~~~~~~~~~~d~~~~~~~~~~~~Ra~~e~~l~ 324 (366)
+.+.+ +..++.++|+|.+.+.+
T Consensus 214 ~~~~~-------------~~hY~~Tl~~W~~~f~~ 235 (273)
T PF02353_consen 214 DVENL-------------GRHYARTLRAWRENFDA 235 (273)
T ss_dssp EEEE--------------HHHHHHHHHHHHHHHHH
T ss_pred EEEEc-------------CcCHHHHHHHHHHHHHH
Confidence 65544 33456666666666553
|
All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: |
| >PLN02336 phosphoethanolamine N-methyltransferase | Back alignment and domain information |
|---|
Probab=98.24 E-value=6.2e-06 Score=84.81 Aligned_cols=101 Identities=16% Similarity=0.167 Sum_probs=65.1
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc-e
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS-V 129 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~-~ 129 (366)
..+|+|+|||+|.+|..+. +. ..+|+..|......... ....+. .++ .
T Consensus 38 ~~~vLDlGcG~G~~~~~la--------~~----------~~~v~giD~s~~~l~~a-----------~~~~~~--~~~i~ 86 (475)
T PLN02336 38 GKSVLELGAGIGRFTGELA--------KK----------AGQVIALDFIESVIKKN-----------ESINGH--YKNVK 86 (475)
T ss_pred CCEEEEeCCCcCHHHHHHH--------hh----------CCEEEEEeCCHHHHHHH-----------HHHhcc--CCceE
Confidence 4589999999999997532 21 14678888754322111 000111 122 2
Q ss_pred EEeccCCCcc--cccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFY--GRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 130 f~~~vpgSFy--~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
|+.+ ++. ...+|++++|+++++.++||++. .++..+|+
T Consensus 87 ~~~~---d~~~~~~~~~~~~fD~I~~~~~l~~l~~-------------------------------------~~~~~~l~ 126 (475)
T PLN02336 87 FMCA---DVTSPDLNISDGSVDLIFSNWLLMYLSD-------------------------------------KEVENLAE 126 (475)
T ss_pred EEEe---cccccccCCCCCCEEEEehhhhHHhCCH-------------------------------------HHHHHHHH
Confidence 4443 443 22378899999999999999743 13456677
Q ss_pred HHHHHhccCceEEEE
Q 017747 208 SRSEELVVGGRMVLI 222 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~ 222 (366)
...+-|+|||+|++.
T Consensus 127 ~~~r~Lk~gG~l~~~ 141 (475)
T PLN02336 127 RMVKWLKVGGYIFFR 141 (475)
T ss_pred HHHHhcCCCeEEEEE
Confidence 889999999999885
|
|
| >PRK11088 rrmA 23S rRNA methyltransferase A; Provisional | Back alignment and domain information |
|---|
Probab=98.23 E-value=5.7e-06 Score=79.06 Aligned_cols=76 Identities=18% Similarity=0.246 Sum_probs=45.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+...+ . .....+++..|+..+.....-+.. ..-.
T Consensus 85 ~~~~vLDiGcG~G~~~~~l~~~~--------~-----~~~~~~v~giD~s~~~l~~A~~~~---------------~~~~ 136 (272)
T PRK11088 85 KATALLDIGCGEGYYTHALADAL--------P-----EITTMQLFGLDISKVAIKYAAKRY---------------PQVT 136 (272)
T ss_pred CCCeEEEECCcCCHHHHHHHHhc--------c-----cccCCeEEEECCCHHHHHHHHHhC---------------CCCe
Confidence 45789999999999887543221 1 111257899999764322221111 1112
Q ss_pred EEeccCCCcccccCCCCcccEEEcccc
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNS 156 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~a 156 (366)
|.. ++..+-.|+++++|+++|..+
T Consensus 137 ~~~---~d~~~lp~~~~sfD~I~~~~~ 160 (272)
T PRK11088 137 FCV---ASSHRLPFADQSLDAIIRIYA 160 (272)
T ss_pred EEE---eecccCCCcCCceeEEEEecC
Confidence 333 245444588999999998654
|
|
| >PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A | Back alignment and domain information |
|---|
Probab=98.21 E-value=5.2e-06 Score=67.65 Aligned_cols=107 Identities=20% Similarity=0.276 Sum_probs=66.9
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce-
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV- 129 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~- 129 (366)
.-+|+|+|||+|..++.+.+ + .|..+++.-|........+-+... . .+. ..++
T Consensus 2 ~~~vLDlGcG~G~~~~~l~~--------~--------~~~~~v~gvD~s~~~~~~a~~~~~-------~-~~~--~~~i~ 55 (112)
T PF12847_consen 2 GGRVLDLGCGTGRLSIALAR--------L--------FPGARVVGVDISPEMLEIARERAA-------E-EGL--SDRIT 55 (112)
T ss_dssp TCEEEEETTTTSHHHHHHHH--------H--------HTTSEEEEEESSHHHHHHHHHHHH-------H-TTT--TTTEE
T ss_pred CCEEEEEcCcCCHHHHHHHh--------c--------CCCCEEEEEeCCHHHHHHHHHHHH-------h-cCC--CCCeE
Confidence 46899999999999986322 1 134889999986543333332221 0 111 1233
Q ss_pred EEeccCCCccccc-CCCCcccEEEccc-ccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRL-FPNNSLHFIHSSN-SLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 130 f~~~vpgSFy~~l-fp~~s~~~~~S~~-alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
|+. +++ ... -..+.+|+++++. ++|++-.. .+...+|+
T Consensus 56 ~~~---~d~-~~~~~~~~~~D~v~~~~~~~~~~~~~------------------------------------~~~~~~l~ 95 (112)
T PF12847_consen 56 FVQ---GDA-EFDPDFLEPFDLVICSGFTLHFLLPL------------------------------------DERRRVLE 95 (112)
T ss_dssp EEE---SCC-HGGTTTSSCEEEEEECSGSGGGCCHH------------------------------------HHHHHHHH
T ss_pred EEE---Ccc-ccCcccCCCCCEEEECCCccccccch------------------------------------hHHHHHHH
Confidence 444 455 222 2334599999999 77754221 24556678
Q ss_pred HHHHHhccCceEEEEe
Q 017747 208 SRSEELVVGGRMVLIL 223 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~ 223 (366)
.-.+-|+|||+|++..
T Consensus 96 ~~~~~L~pgG~lvi~~ 111 (112)
T PF12847_consen 96 RIRRLLKPGGRLVINT 111 (112)
T ss_dssp HHHHHEEEEEEEEEEE
T ss_pred HHHHhcCCCcEEEEEE
Confidence 8899999999999874
|
... |
| >KOG1540 consensus Ubiquinone biosynthesis methyltransferase COQ5 [Coenzyme transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.20 E-value=4.6e-06 Score=78.33 Aligned_cols=173 Identities=14% Similarity=0.168 Sum_probs=102.4
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCC--
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSP-- 127 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~-- 127 (366)
..++++|++||||-.++.+++.+-++- + .-+-+|+..|+..++.+---+.- .+.+.+ ..
T Consensus 100 ~~m~~lDvaGGTGDiaFril~~v~s~~--------~--~~~~~V~v~Dinp~mL~vgkqRa--------~~~~l~-~~~~ 160 (296)
T KOG1540|consen 100 KGMKVLDVAGGTGDIAFRILRHVKSQF--------G--DRESKVTVLDINPHMLAVGKQRA--------KKRPLK-ASSR 160 (296)
T ss_pred CCCeEEEecCCcchhHHHHHHhhcccc--------C--CCCceEEEEeCCHHHHHHHHHHH--------hhcCCC-cCCc
Confidence 459999999999999998665552211 1 12377888888765433221111 001222 12
Q ss_pred ceEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 128 SVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 128 ~~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
-.|++ |+...-.||++++|...+++.+--+.+++..+ .+|
T Consensus 161 ~~w~~---~dAE~LpFdd~s~D~yTiafGIRN~th~~k~l-----------------------~EA-------------- 200 (296)
T KOG1540|consen 161 VEWVE---GDAEDLPFDDDSFDAYTIAFGIRNVTHIQKAL-----------------------REA-------------- 200 (296)
T ss_pred eEEEe---CCcccCCCCCCcceeEEEecceecCCCHHHHH-----------------------HHH--------------
Confidence 23444 57755569999999999999998877755544 233
Q ss_pred HHHHHhccCceEEEEeecCCCCCCC-CCCchhHHH---HHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhc
Q 017747 208 SRSEELVVGGRMVLILLGRIGPDHV-DRGNSFFWE---LLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGRE 283 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~g~~~~~~~-~~~~~~~~~---~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~ 283 (366)
.|.|||||++.+.-+..-+..+. ..-..+.++ .+.+.+....+.+.+=-| .---||+.||+...++++
T Consensus 201 --YRVLKpGGrf~cLeFskv~~~~l~~fy~~ysf~VlpvlG~~iagd~~sYqYLve------SI~rfp~qe~f~~mieda 272 (296)
T KOG1540|consen 201 --YRVLKPGGRFSCLEFSKVENEPLKWFYDQYSFDVLPVLGEIIAGDRKSYQYLVE------SIRRFPPQEEFASMIEDA 272 (296)
T ss_pred --HHhcCCCcEEEEEEccccccHHHHHHHHhhhhhhhchhhHhhhhhHhhhhhHHh------hhhcCCCHHHHHHHHHHc
Confidence 67999999999988877653210 000011111 222222222222211111 112489999999999999
Q ss_pred CceEEee
Q 017747 284 GSFKLDQ 290 (366)
Q Consensus 284 gsf~i~~ 290 (366)
| |+...
T Consensus 273 G-F~~~~ 278 (296)
T KOG1540|consen 273 G-FSSVN 278 (296)
T ss_pred C-Ccccc
Confidence 9 87654
|
|
| >smart00138 MeTrc Methyltransferase, chemotaxis proteins | Back alignment and domain information |
|---|
Probab=98.20 E-value=9.7e-06 Score=77.42 Aligned_cols=128 Identities=16% Similarity=0.223 Sum_probs=69.5
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
..+++|+|+|||||.-+--+.- .+.+.... ...+.++|+..|+....-...-+....... ... ....-...
T Consensus 98 ~~~~ri~d~GCgtGee~YslA~----~l~e~~~~---~~~~~~~I~g~Dis~~~L~~Ar~~~y~~~~-~~~-~~~~~~~~ 168 (264)
T smart00138 98 GRRVRIWSAGCSTGEEPYSLAM----LLAETLPK---AREPDVKILATDIDLKALEKARAGIYPERE-LED-LPKALLAR 168 (264)
T ss_pred CCCEEEEeccccCChHHHHHHH----HHHHHhhh---cCCCCeEEEEEECCHHHHHHHHcCCCCHHH-Hhc-CCHHHHhh
Confidence 3569999999999974221111 12222111 112358999999977655544443321000 000 00000001
Q ss_pred eEEe----------------ccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHH
Q 017747 129 VYIA----------------GYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSK 192 (366)
Q Consensus 129 ~f~~----------------~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ 192 (366)
+|.. -..++..+..+|.+++|+++|.+.|||++. |
T Consensus 169 yf~~~~~~~~v~~~ir~~V~F~~~dl~~~~~~~~~fD~I~crnvl~yf~~-~---------------------------- 219 (264)
T smart00138 169 YFSRVEDKYRVKPELKERVRFAKHNLLAESPPLGDFDLIFCRNVLIYFDE-P---------------------------- 219 (264)
T ss_pred hEEeCCCeEEEChHHhCcCEEeeccCCCCCCccCCCCEEEechhHHhCCH-H----------------------------
Confidence 1110 011233333356889999999999999754 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCceEEEE
Q 017747 193 AYFKQFQEDFTLFLRSRSEELVVGGRMVLI 222 (366)
Q Consensus 193 ay~~Q~~~D~~~FL~~Ra~EL~~GG~lvl~ 222 (366)
+....|+.-++-|+|||.|++.
T Consensus 220 --------~~~~~l~~l~~~L~pGG~L~lg 241 (264)
T smart00138 220 --------TQRKLLNRFAEALKPGGYLFLG 241 (264)
T ss_pred --------HHHHHHHHHHHHhCCCeEEEEE
Confidence 1223456668999999999974
|
Methylates methyl-accepting chemotaxis proteins to form gamma-glutamyl methyl ester residues. |
| >KOG3010 consensus Methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.20 E-value=1.7e-05 Score=74.02 Aligned_cols=103 Identities=17% Similarity=0.223 Sum_probs=66.8
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceE
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVY 130 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 130 (366)
.-.+.|+|||+|..++. +.+. + -+|+..|+...+.+-+-+. +++-
T Consensus 34 h~~a~DvG~G~Gqa~~~--------iae~---------~-k~VIatD~s~~mL~~a~k~-----------------~~~~ 78 (261)
T KOG3010|consen 34 HRLAWDVGTGNGQAARG--------IAEH---------Y-KEVIATDVSEAMLKVAKKH-----------------PPVT 78 (261)
T ss_pred cceEEEeccCCCcchHH--------HHHh---------h-hhheeecCCHHHHHHhhcC-----------------CCcc
Confidence 34889999999965543 3332 2 5678888876543322111 1111
Q ss_pred EeccCCCcc----ccc-CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 017747 131 IAGYPGSFY----GRL-FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLF 205 (366)
Q Consensus 131 ~~~vpgSFy----~~l-fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~F 205 (366)
-+-+|-++- ..| -+++|||++.+.-|+||+ |+.+|
T Consensus 79 y~~t~~~ms~~~~v~L~g~e~SVDlI~~Aqa~HWF----------------------------------------dle~f 118 (261)
T KOG3010|consen 79 YCHTPSTMSSDEMVDLLGGEESVDLITAAQAVHWF----------------------------------------DLERF 118 (261)
T ss_pred cccCCccccccccccccCCCcceeeehhhhhHHhh----------------------------------------chHHH
Confidence 112333332 233 369999999999999995 45567
Q ss_pred HHHHHHHhccCceEEEEeecCCC
Q 017747 206 LRSRSEELVVGGRMVLILLGRIG 228 (366)
Q Consensus 206 L~~Ra~EL~~GG~lvl~~~g~~~ 228 (366)
++.-.+-|++.|.++....-+++
T Consensus 119 y~~~~rvLRk~Gg~iavW~Y~dd 141 (261)
T KOG3010|consen 119 YKEAYRVLRKDGGLIAVWNYNDD 141 (261)
T ss_pred HHHHHHHcCCCCCEEEEEEccCC
Confidence 77779999999988887776654
|
|
| >TIGR03438 probable methyltransferase | Back alignment and domain information |
|---|
Probab=98.20 E-value=7.6e-06 Score=79.54 Aligned_cols=115 Identities=17% Similarity=0.234 Sum_probs=73.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..|..+++.. +. ..+++.-|+....-....+.+.. . .+.+
T Consensus 63 ~~~~iLELGcGtG~~t~~Ll~~l--------------~~-~~~~~~iDiS~~mL~~a~~~l~~-------~-----~p~~ 115 (301)
T TIGR03438 63 AGCELVELGSGSSRKTRLLLDAL--------------RQ-PARYVPIDISADALKESAAALAA-------D-----YPQL 115 (301)
T ss_pred CCCeEEecCCCcchhHHHHHHhh--------------cc-CCeEEEEECCHHHHHHHHHHHHh-------h-----CCCc
Confidence 35789999999999998654433 11 27899999987543333332221 0 2222
Q ss_pred EEeccCCCccccc-CCCC----cccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRL-FPNN----SLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTL 204 (366)
Q Consensus 130 f~~~vpgSFy~~l-fp~~----s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~ 204 (366)
-+.++-|+|.+.+ +|.. ...++++.+++++++. .|...
T Consensus 116 ~v~~i~gD~~~~~~~~~~~~~~~~~~~~~gs~~~~~~~-------------------------------------~e~~~ 158 (301)
T TIGR03438 116 EVHGICADFTQPLALPPEPAAGRRLGFFPGSTIGNFTP-------------------------------------EEAVA 158 (301)
T ss_pred eEEEEEEcccchhhhhcccccCCeEEEEecccccCCCH-------------------------------------HHHHH
Confidence 2334446886543 3333 3556777778888642 24457
Q ss_pred HHHHHHHHhccCceEEEEeecCCC
Q 017747 205 FLRSRSEELVVGGRMVLILLGRIG 228 (366)
Q Consensus 205 FL~~Ra~EL~~GG~lvl~~~g~~~ 228 (366)
||+.-++-|+|||+|++.+-...+
T Consensus 159 ~L~~i~~~L~pgG~~lig~d~~~~ 182 (301)
T TIGR03438 159 FLRRIRQLLGPGGGLLIGVDLVKD 182 (301)
T ss_pred HHHHHHHhcCCCCEEEEeccCCCC
Confidence 788888999999999998765544
|
This model represents a distinct set of uncharacterized proteins found in the bacteria. Analysis by PSI-BLAST shows remote sequence homology to methyltransferases |
| >TIGR01983 UbiG ubiquinone biosynthesis O-methyltransferase | Back alignment and domain information |
|---|
Probab=98.15 E-value=2.7e-05 Score=71.57 Aligned_cols=159 Identities=13% Similarity=0.149 Sum_probs=85.5
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
+..+|+|+|||+|..+..+ .+. . ..++..|+........-+.+. . .+. ....
T Consensus 45 ~~~~vLdlG~G~G~~~~~l--------~~~--------~--~~v~~iD~s~~~~~~a~~~~~-------~-~~~--~~~~ 96 (224)
T TIGR01983 45 FGLRVLDVGCGGGLLSEPL--------ARL--------G--ANVTGIDASEENIEVAKLHAK-------K-DPL--LKIE 96 (224)
T ss_pred CCCeEEEECCCCCHHHHHH--------Hhc--------C--CeEEEEeCCHHHHHHHHHHHH-------H-cCC--CceE
Confidence 4689999999999877642 111 1 347888875432221111110 0 000 0112
Q ss_pred EEeccCCCcccccCC-CCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFP-NNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 130 f~~~vpgSFy~~lfp-~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
|.. +++-+-..+ ++++|+++++.++|+..+. ..+|+.
T Consensus 97 ~~~---~d~~~~~~~~~~~~D~i~~~~~l~~~~~~---------------------------------------~~~l~~ 134 (224)
T TIGR01983 97 YRC---TSVEDLAEKGAKSFDVVTCMEVLEHVPDP---------------------------------------QAFIRA 134 (224)
T ss_pred EEe---CCHHHhhcCCCCCccEEEehhHHHhCCCH---------------------------------------HHHHHH
Confidence 222 233222222 4789999999998886431 234566
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEE
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKL 288 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i 288 (366)
..+-|+|||.+++....+... ........ .++. .+.+.. .......+.+++++.+.+++.| |+|
T Consensus 135 ~~~~L~~gG~l~i~~~~~~~~-------~~~~~~~~---~~~~-~~~~~~----~~~~~~~~~~~~~l~~~l~~~G-~~i 198 (224)
T TIGR01983 135 CAQLLKPGGILFFSTINRTPK-------SYLLAIVG---AEYI-LRIVPK----GTHDWEKFIKPSELTSWLESAG-LRV 198 (224)
T ss_pred HHHhcCCCcEEEEEecCCCch-------HHHHHHHh---hhhh-hhcCCC----CcCChhhcCCHHHHHHHHHHcC-Cee
Confidence 678899999999876543210 11111111 0111 111110 0111123568999999999998 999
Q ss_pred eeEEEE
Q 017747 289 DQLDMF 294 (366)
Q Consensus 289 ~~~e~~ 294 (366)
..+..+
T Consensus 199 ~~~~~~ 204 (224)
T TIGR01983 199 KDVKGL 204 (224)
T ss_pred eeeeeE
Confidence 777643
|
This model represents an O-methyltransferase believed to act at two points in the ubiquinone biosynthetic pathway in bacteria (UbiG) and fungi (COQ3). A separate methylase (MenG/UbiE) catalyzes the single C-methylation step. The most commonly used names for genes in this family do not indicate whether this gene is an O-methyl, or C-methyl transferase. |
| >KOG1541 consensus Predicted protein carboxyl methylase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.15 E-value=2.1e-05 Score=72.50 Aligned_cols=142 Identities=18% Similarity=0.277 Sum_probs=90.9
Q ss_pred cchHHHhhHH---HHHHHHHHHHHHHHHHHHhhhhcCCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcc
Q 017747 15 PTSYARNSSL---QKKASDTVKHITLEALQQLYLEIDPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEF 91 (366)
Q Consensus 15 ~~sY~~nS~~---Q~~~~~~~~~~l~~ai~~l~~~~~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~ 91 (366)
+.-|++||.+ |.+..++++.+|.- ..+++--|+|+|||||--+-. | ..+.-
T Consensus 20 A~kYt~nsri~~IQ~em~eRaLELLal--------p~~~~~~iLDIGCGsGLSg~v--------L----------~~~Gh 73 (270)
T KOG1541|consen 20 APKYTQNSRIVLIQAEMAERALELLAL--------PGPKSGLILDIGCGSGLSGSV--------L----------SDSGH 73 (270)
T ss_pred hhhccccceeeeehHHHHHHHHHHhhC--------CCCCCcEEEEeccCCCcchhe--------e----------ccCCc
Confidence 4478888865 55555555544331 123578899999999987631 2 12347
Q ss_pred eEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccc
Q 017747 92 HFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEM 171 (366)
Q Consensus 92 ~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~ 171 (366)
+++.-|...-+.... ...+.. +.+-.+-.+ .+-.|+++++|-++|-+|+|||=..-.....
T Consensus 74 ~wiGvDiSpsML~~a----------~~~e~e----gdlil~DMG---~GlpfrpGtFDg~ISISAvQWLcnA~~s~~~-- 134 (270)
T KOG1541|consen 74 QWIGVDISPSMLEQA----------VERELE----GDLILCDMG---EGLPFRPGTFDGVISISAVQWLCNADKSLHV-- 134 (270)
T ss_pred eEEeecCCHHHHHHH----------HHhhhh----cCeeeeecC---CCCCCCCCccceEEEeeeeeeecccCccccC--
Confidence 889999875432222 211110 112122111 2344899999999999999997554332211
Q ss_pred cCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEEEeecCC
Q 017747 172 GESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRI 227 (366)
Q Consensus 172 ~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~lvl~~~g~~ 227 (366)
| ++.+.+|+..-..-|++|++-|+.+--.+
T Consensus 135 ----------------P----------~~Rl~~FF~tLy~~l~rg~raV~QfYpen 164 (270)
T KOG1541|consen 135 ----------------P----------KKRLLRFFGTLYSCLKRGARAVLQFYPEN 164 (270)
T ss_pred ----------------h----------HHHHHHHhhhhhhhhccCceeEEEecccc
Confidence 1 57788999999999999999999985443
|
|
| >TIGR00138 gidB 16S rRNA methyltransferase GidB | Back alignment and domain information |
|---|
Probab=98.12 E-value=4.2e-06 Score=75.51 Aligned_cols=130 Identities=17% Similarity=0.229 Sum_probs=75.9
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce-
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV- 129 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~- 129 (366)
..+|+|+|||+|..++.+ ... .|..+|+.-|...+.-..+-+.+ ...+ ..++
T Consensus 43 ~~~vLDiGcGtG~~s~~l--------a~~--------~~~~~V~~iD~s~~~~~~a~~~~--------~~~~---~~~i~ 95 (181)
T TIGR00138 43 GKKVIDIGSGAGFPGIPL--------AIA--------RPELKLTLLESNHKKVAFLREVK--------AELG---LNNVE 95 (181)
T ss_pred CCeEEEecCCCCccHHHH--------HHH--------CCCCeEEEEeCcHHHHHHHHHHH--------HHhC---CCCeE
Confidence 579999999999998752 221 23378999998765322221111 1111 1232
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
++. ++.. .+.+.+++|+++|.. +|++. .+++.-
T Consensus 96 ~i~---~d~~-~~~~~~~fD~I~s~~-~~~~~------------------------------------------~~~~~~ 128 (181)
T TIGR00138 96 IVN---GRAE-DFQHEEQFDVITSRA-LASLN------------------------------------------VLLELT 128 (181)
T ss_pred EEe---cchh-hccccCCccEEEehh-hhCHH------------------------------------------HHHHHH
Confidence 333 4543 344578999999864 33221 122333
Q ss_pred HHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCcc
Q 017747 210 SEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAH 267 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P 267 (366)
.+-|+|||++++.. |... . ..+....+.|..+| ++..+.+++..|
T Consensus 129 ~~~LkpgG~lvi~~-~~~~----------~-~~~~~~~e~~~~~~-~~~~~~~~~~~~ 173 (181)
T TIGR00138 129 LNLLKVGGYFLAYK-GKKY----------L-DEIEEAKRKCQVLG-VEPLEVPPLTGP 173 (181)
T ss_pred HHhcCCCCEEEEEc-CCCc----------H-HHHHHHHHhhhhcC-ceEeeccccCCC
Confidence 66799999999874 2221 1 12444456666678 566667888887
|
GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA. |
| >PRK11188 rrmJ 23S rRNA methyltransferase J; Provisional | Back alignment and domain information |
|---|
Probab=98.08 E-value=1.7e-05 Score=73.12 Aligned_cols=111 Identities=14% Similarity=0.200 Sum_probs=69.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..|..++ ++. .+.-+|+.-|+.. .+ .++ +-.
T Consensus 51 ~~~~VLDlG~GtG~~t~~l~--------~~~-------~~~~~V~aVDi~~--~~----~~~---------------~v~ 94 (209)
T PRK11188 51 PGMTVVDLGAAPGGWSQYAV--------TQI-------GDKGRVIACDILP--MD----PIV---------------GVD 94 (209)
T ss_pred CCCEEEEEcccCCHHHHHHH--------HHc-------CCCceEEEEeccc--cc----CCC---------------CcE
Confidence 34689999999999886532 221 2236888889853 10 011 112
Q ss_pred EEeccCCCcccc--------cCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGR--------LFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQED 201 (366)
Q Consensus 130 f~~~vpgSFy~~--------lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D 201 (366)
++. +++.+. -++++++|+++|+.+.||... |. .+ . ..+ ...
T Consensus 95 ~i~---~D~~~~~~~~~i~~~~~~~~~D~V~S~~~~~~~g~-~~--~d--------------------~----~~~-~~~ 143 (209)
T PRK11188 95 FLQ---GDFRDELVLKALLERVGDSKVQVVMSDMAPNMSGT-PA--VD--------------------I----PRA-MYL 143 (209)
T ss_pred EEe---cCCCChHHHHHHHHHhCCCCCCEEecCCCCccCCC-hH--HH--------------------H----HHH-HHH
Confidence 333 466542 267899999999999999442 21 11 0 000 111
Q ss_pred HHHHHHHHHHHhccCceEEEEeecCC
Q 017747 202 FTLFLRSRSEELVVGGRMVLILLGRI 227 (366)
Q Consensus 202 ~~~FL~~Ra~EL~~GG~lvl~~~g~~ 227 (366)
....|+.-.+-|+|||+|++..+...
T Consensus 144 ~~~~L~~~~~~LkpGG~~vi~~~~~~ 169 (209)
T PRK11188 144 VELALDMCRDVLAPGGSFVVKVFQGE 169 (209)
T ss_pred HHHHHHHHHHHcCCCCEEEEEEecCc
Confidence 35678888999999999999766544
|
|
| >PRK07580 Mg-protoporphyrin IX methyl transferase; Validated | Back alignment and domain information |
|---|
Probab=98.08 E-value=0.00016 Score=66.61 Aligned_cols=31 Identities=16% Similarity=0.351 Sum_probs=24.6
Q ss_pred CccccCCCHHHHHHHHhhcCceEEeeEEEEee
Q 017747 265 HAHFYAPSKEEIEGEVGREGSFKLDQLDMFQV 296 (366)
Q Consensus 265 ~~P~y~ps~eEv~~~i~~~gsf~i~~~e~~~~ 296 (366)
..+.++.+.+++...++..| |++...+.+..
T Consensus 187 ~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~~~ 217 (230)
T PRK07580 187 TTRIYPHREKGIRRALAAAG-FKVVRTERISS 217 (230)
T ss_pred CCCccccCHHHHHHHHHHCC-CceEeeeeccc
Confidence 34567789999999999999 99877766543
|
|
| >PF03848 TehB: Tellurite resistance protein TehB; InterPro: IPR015985 Tellurite resistance protein TehB is part of a tellurite-reducing operon tehA and tehB | Back alignment and domain information |
|---|
Probab=98.06 E-value=4.6e-06 Score=75.94 Aligned_cols=105 Identities=19% Similarity=0.276 Sum_probs=62.1
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
++-+++|+|||.|+||+. |.++ | ..|..-|....-...+.+ .....+ . ++
T Consensus 30 ~~g~~LDlgcG~GRNaly--------LA~~-----G-----~~VtAvD~s~~al~~l~~--------~a~~~~---l-~i 79 (192)
T PF03848_consen 30 KPGKALDLGCGEGRNALY--------LASQ-----G-----FDVTAVDISPVALEKLQR--------LAEEEG---L-DI 79 (192)
T ss_dssp -SSEEEEES-TTSHHHHH--------HHHT-----T------EEEEEESSHHHHHHHHH--------HHHHTT-----TE
T ss_pred CCCcEEEcCCCCcHHHHH--------HHHC-----C-----CeEEEEECCHHHHHHHHH--------HHhhcC---c-ee
Confidence 468999999999999986 3332 2 889999987543333221 111111 1 12
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
- ..-.+.-+.- +++..|+++|...+|.|.. .. +..+++..
T Consensus 80 ~--~~~~Dl~~~~-~~~~yD~I~st~v~~fL~~---~~----------------------------------~~~i~~~m 119 (192)
T PF03848_consen 80 R--TRVADLNDFD-FPEEYDFIVSTVVFMFLQR---EL----------------------------------RPQIIENM 119 (192)
T ss_dssp E--EEE-BGCCBS--TTTEEEEEEESSGGGS-G---GG----------------------------------HHHHHHHH
T ss_pred E--EEEecchhcc-ccCCcCEEEEEEEeccCCH---HH----------------------------------HHHHHHHH
Confidence 1 1112442333 3478999999999999753 12 12335667
Q ss_pred HHHhccCceEEEEee
Q 017747 210 SEELVVGGRMVLILL 224 (366)
Q Consensus 210 a~EL~~GG~lvl~~~ 224 (366)
.+.++|||.+++..+
T Consensus 120 ~~~~~pGG~~li~~~ 134 (192)
T PF03848_consen 120 KAATKPGGYNLIVTF 134 (192)
T ss_dssp HHTEEEEEEEEEEEE
T ss_pred HhhcCCcEEEEEEEe
Confidence 899999999888654
|
When present in high copy number, TehB is responsible for potassium tellurite resistance, probably by increasing the reduction rate of tellurite to metallic tellurium within the bacterium. TehB is a cytoplasmic protein which possesses three conserved motifs (I, II, and III) found in S-adenosyl-L-methionine (SAM)-dependent non-nucleic acid methyltransferases []. Conformational changes in TehB are observed upon binding of both tellurite and SAM, suggesting that TehB utilises a methyltransferase activity in the detoxification of tellurite. This entry represents the methyltransferase domain found in all TehB proteins.; PDB: 2KW5_A 3MER_B 3M70_A 2I6G_A 4DQ0_D 2XVA_B 2XVM_A. |
| >COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.05 E-value=0.00031 Score=67.54 Aligned_cols=113 Identities=19% Similarity=0.222 Sum_probs=67.9
Q ss_pred HHHHHHHHHHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCcc-ccCCCHHHHH
Q 017747 199 QEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAH-FYAPSKEEIE 277 (366)
Q Consensus 199 ~~D~~~FL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P-~y~ps~eEv~ 277 (366)
.+.+..|++.-.+-|+|||+|++-.++....... . .. .-++.+.+| -+.||..++.
T Consensus 152 ~~~~~~ff~~~~~~L~~~G~~llh~I~~~~~~~~-~---------~~-------------~~i~~yiFPgG~lPs~~~i~ 208 (283)
T COG2230 152 KENYDDFFKKVYALLKPGGRMLLHSITGPDQEFR-R---------FP-------------DFIDKYIFPGGELPSISEIL 208 (283)
T ss_pred cccHHHHHHHHHhhcCCCceEEEEEecCCCcccc-c---------ch-------------HHHHHhCCCCCcCCCHHHHH
Confidence 4567788999999999999999999888764211 0 00 011122333 3668999999
Q ss_pred HHHhhcCceEEeeEEEEeeccCCCCcccchhhhHhhhHHHhhhhHHHhhcCCCcchH-HHHHHHHHHHHHHHH
Q 017747 278 GEVGREGSFKLDQLDMFQVERQGHDRGESYGSAVARTVRAIQESTIIHHFGIGEGVL-DNLFEIYGRLVDEEM 349 (366)
Q Consensus 278 ~~i~~~gsf~i~~~e~~~~~~~~~~d~~~~~~~~~~~~Ra~~e~~l~~~~g~~~~i~-d~lf~r~~~~~~~~~ 349 (366)
...++.| |.+.+.+.+. ..++.+++.|.+.+-+ +.....+++ +.++.+|+..++..-
T Consensus 209 ~~~~~~~-~~v~~~~~~~-------------~hYa~Tl~~W~~~f~~-~~~~a~~~~~e~~~r~w~~yl~~~~ 266 (283)
T COG2230 209 ELASEAG-FVVLDVESLR-------------PHYARTLRLWRERFEA-NRDEAIALYDERFYRMWELYLAACA 266 (283)
T ss_pred HHHHhcC-cEEehHhhhc-------------HHHHHHHHHHHHHHHH-HHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 9999998 8885544442 3455666666665543 232101123 344444555555443
|
|
| >PF08003 Methyltransf_9: Protein of unknown function (DUF1698); InterPro: IPR010017 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (AdoMet) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals | Back alignment and domain information |
|---|
Probab=98.03 E-value=3e-05 Score=74.93 Aligned_cols=147 Identities=20% Similarity=0.281 Sum_probs=98.3
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceE
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVY 130 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 130 (366)
..+|+|+||+.|+-+.. +.++ .| -.|+.-| |+-.|..-|+.+..+.. . ...+|
T Consensus 116 gk~VLDIGC~nGY~~fr--------M~~~--------GA-~~ViGiD-P~~lf~~QF~~i~~~lg-------~--~~~~~ 168 (315)
T PF08003_consen 116 GKRVLDIGCNNGYYSFR--------MLGR--------GA-KSVIGID-PSPLFYLQFEAIKHFLG-------Q--DPPVF 168 (315)
T ss_pred CCEEEEecCCCcHHHHH--------Hhhc--------CC-CEEEEEC-CChHHHHHHHHHHHHhC-------C--CccEE
Confidence 46999999999999975 2221 23 5678888 66577776765543321 1 22444
Q ss_pred EeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 017747 131 IAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRS 210 (366)
Q Consensus 131 ~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra 210 (366)
...+ . .+.|-+.+++|.+||.-.|=-+.+ |- .. |..-.
T Consensus 169 ~lpl--g-vE~Lp~~~~FDtVF~MGVLYHrr~-Pl-----------------------~~---------------L~~Lk 206 (315)
T PF08003_consen 169 ELPL--G-VEDLPNLGAFDTVFSMGVLYHRRS-PL-----------------------DH---------------LKQLK 206 (315)
T ss_pred EcCc--c-hhhccccCCcCEEEEeeehhccCC-HH-----------------------HH---------------HHHHH
Confidence 4422 2 355545789999999766555443 22 12 45557
Q ss_pred HHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEE
Q 017747 211 EELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKL 288 (366)
Q Consensus 211 ~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i 288 (366)
+-|++||.|||.++.-+.... .-++.++.+..|+--++.||...+...++..| |+-
T Consensus 207 ~~L~~gGeLvLETlvi~g~~~---------------------~~L~P~~rYa~m~nv~FiPs~~~L~~wl~r~g-F~~ 262 (315)
T PF08003_consen 207 DSLRPGGELVLETLVIDGDEN---------------------TVLVPEDRYAKMRNVWFIPSVAALKNWLERAG-FKD 262 (315)
T ss_pred HhhCCCCEEEEEEeeecCCCc---------------------eEEccCCcccCCCceEEeCCHHHHHHHHHHcC-Cce
Confidence 889999999999887654321 11234455778888899999999999999999 754
|
The reaction is catalysed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. Three classes of DNA Mtases transfer the methyl group from AdoMet to the target base to form either N-6-methyladenine, or N-4-methylcytosine, or C-5- methylcytosine. In C-5-cytosine Mtases, ten conserved motifs are arranged in the same order []. Motif I (a glycine-rich or closely related consensus sequence; FAGxGG in M.HhaI []), shared by other AdoMet-Mtases [], is part of the cofactor binding site and motif IV (PCQ) is part of the catalytic site. In contrast, sequence comparison among N-6-adenine and N-4-cytosine Mtases indicated two of the conserved segments [], although more conserved segments may be present. One of them corresponds to motif I in C-5-cytosine Mtases, and the other is named (D/N/S)PP(Y/F). Crystal structures are known for a number of Mtases [, , , ]. The cofactor binding sites are almost identical and the essential catalytic amino acids coincide. The comparable protein folding and the existence of equivalent amino acids in similar secondary and tertiary positions indicate that many (if not all) AdoMet-Mtases have a common catalytic domain structure. This permits tertiary structure prediction of other DNA, RNA, protein, and small-molecule AdoMet-Mtases from their amino acid sequences []. This entry represents a set of bacterial AdoMet-dependent tRNA (mo5U34)-methyltransferases. These enzymes catalyse the conversion of 5-hydroxyuridine (ho5U) to 5-methoxyuridine (mo5U) at the wobble position (34) of tRNA []. The 5-methoxyuridine is subsequently converted to uridine-5-oxyacetic acid, a modified nucleoside that is apparently necessary for the efficient decoding of G-ending Pro, Ala, and Val codons in these organisms [].; GO: 0016300 tRNA (uracil) methyltransferase activity, 0002098 tRNA wobble uridine modification |
| >PF13649 Methyltransf_25: Methyltransferase domain; PDB: 3BXO_B 3GGD_A 3PX2_A 3PX3_A 3PFH_D 3PFG_A 1Y8C_A | Back alignment and domain information |
|---|
Probab=98.03 E-value=4.4e-06 Score=67.43 Aligned_cols=100 Identities=25% Similarity=0.414 Sum_probs=60.5
Q ss_pred EEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceEEec
Q 017747 54 IADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVYIAG 133 (366)
Q Consensus 54 IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~~~ 133 (366)
|+|+|||+|.++..+.... . ..|+.+++.-|+..+.....-+.... .+ .+.-|+.+
T Consensus 1 ILDlgcG~G~~~~~l~~~~---------~----~~~~~~~~gvD~s~~~l~~~~~~~~~--------~~---~~~~~~~~ 56 (101)
T PF13649_consen 1 ILDLGCGTGRVTRALARRF---------D----AGPSSRVIGVDISPEMLELAKKRFSE--------DG---PKVRFVQA 56 (101)
T ss_dssp -EEET-TTSHHHHHHHHHS------------------SEEEEEES-HHHHHHHHHHSHH--------TT---TTSEEEES
T ss_pred CEEeecCCcHHHHHHHHHh---------h----hcccceEEEEECCHHHHHHHHHhchh--------cC---CceEEEEC
Confidence 7999999999998643332 1 12458999999976544333322211 00 22335554
Q ss_pred cCCCcccccCCCCcccEEEcccc-cccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017747 134 YPGSFYGRLFPNNSLHFIHSSNS-LHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEE 212 (366)
Q Consensus 134 vpgSFy~~lfp~~s~~~~~S~~a-lhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~E 212 (366)
++-+-.++.+++|+++++.. +|++++ +++..+|+.-++-
T Consensus 57 ---D~~~l~~~~~~~D~v~~~~~~~~~~~~-------------------------------------~~~~~ll~~~~~~ 96 (101)
T PF13649_consen 57 ---DARDLPFSDGKFDLVVCSGLSLHHLSP-------------------------------------EELEALLRRIARL 96 (101)
T ss_dssp ---CTTCHHHHSSSEEEEEE-TTGGGGSSH-------------------------------------HHHHHHHHHHHHT
T ss_pred ---CHhHCcccCCCeeEEEEcCCccCCCCH-------------------------------------HHHHHHHHHHHHH
Confidence 44332367889999999655 888544 4567788888999
Q ss_pred hccCc
Q 017747 213 LVVGG 217 (366)
Q Consensus 213 L~~GG 217 (366)
|+|||
T Consensus 97 l~pgG 101 (101)
T PF13649_consen 97 LRPGG 101 (101)
T ss_dssp EEEEE
T ss_pred hCCCC
Confidence 99998
|
|
| >PRK05134 bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase; Provisional | Back alignment and domain information |
|---|
Probab=98.02 E-value=3.3e-05 Score=71.62 Aligned_cols=157 Identities=13% Similarity=0.109 Sum_probs=86.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+ .+. ..+++..|+..+....+-+... . .+ ...-
T Consensus 48 ~~~~vLdiG~G~G~~~~~l--------~~~----------~~~v~~iD~s~~~~~~a~~~~~-------~-~~---~~~~ 98 (233)
T PRK05134 48 FGKRVLDVGCGGGILSESM--------ARL----------GADVTGIDASEENIEVARLHAL-------E-SG---LKID 98 (233)
T ss_pred CCCeEEEeCCCCCHHHHHH--------HHc----------CCeEEEEcCCHHHHHHHHHHHH-------H-cC---CceE
Confidence 3578999999999876532 111 1467888886543221111110 0 00 1111
Q ss_pred EEeccCCCccccc-CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRL-FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 130 f~~~vpgSFy~~l-fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
+.. +++-.-+ .+++.+|+++++..+++..+. ..+|+.
T Consensus 99 ~~~---~~~~~~~~~~~~~fD~Ii~~~~l~~~~~~---------------------------------------~~~l~~ 136 (233)
T PRK05134 99 YRQ---TTAEELAAEHPGQFDVVTCMEMLEHVPDP---------------------------------------ASFVRA 136 (233)
T ss_pred EEe---cCHHHhhhhcCCCccEEEEhhHhhccCCH---------------------------------------HHHHHH
Confidence 222 2222211 356789999999888875431 124567
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEE
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKL 288 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i 288 (366)
..+-|+|||+|+++..++... .+...... ...+..+. .. .......+.+++|+.+++++.| |++
T Consensus 137 ~~~~L~~gG~l~v~~~~~~~~-------~~~~~~~~---~~~~~~~~-~~----~~~~~~~~~~~~~~~~~l~~~G-f~~ 200 (233)
T PRK05134 137 CAKLVKPGGLVFFSTLNRNLK-------SYLLAIVG---AEYVLRML-PK----GTHDYKKFIKPSELAAWLRQAG-LEV 200 (233)
T ss_pred HHHHcCCCcEEEEEecCCChH-------HHHHHHhh---HHHHhhhc-Cc----ccCchhhcCCHHHHHHHHHHCC-CeE
Confidence 788899999999987654221 11111111 11111111 10 1112235678999999999999 888
Q ss_pred eeEEE
Q 017747 289 DQLDM 293 (366)
Q Consensus 289 ~~~e~ 293 (366)
.....
T Consensus 201 v~~~~ 205 (233)
T PRK05134 201 QDITG 205 (233)
T ss_pred eeeee
Confidence 76653
|
|
| >TIGR03587 Pse_Me-ase pseudaminic acid biosynthesis-associated methylase | Back alignment and domain information |
|---|
Probab=97.98 E-value=3.8e-05 Score=70.54 Aligned_cols=91 Identities=23% Similarity=0.309 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHhhhhcCCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhC
Q 017747 31 TVKHITLEALQQLYLEIDPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKAL 110 (366)
Q Consensus 31 ~~~~~l~~ai~~l~~~~~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l 110 (366)
....++.+.+.. .+...+|+|+|||+|.++.. +.+. .|..+++.-|+..+.....-+.+
T Consensus 29 ~~~~~~~~~l~~-----~~~~~~VLDiGCG~G~~~~~--------L~~~--------~~~~~v~giDiS~~~l~~A~~~~ 87 (204)
T TIGR03587 29 AKLAMFARALNR-----LPKIASILELGANIGMNLAA--------LKRL--------LPFKHIYGVEINEYAVEKAKAYL 87 (204)
T ss_pred HHHHHHHHHHHh-----cCCCCcEEEEecCCCHHHHH--------HHHh--------CCCCeEEEEECCHHHHHHHHhhC
Confidence 344455554442 23467899999999998864 2221 13478999998765433332211
Q ss_pred chhHHHHhhhcCCCCCCceEEeccCCCcccccCCCCcccEEEccccccccc
Q 017747 111 PDFHRQLRNERGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLS 161 (366)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls 161 (366)
+ ...+. .++..+ .++++++|+++++.++|+++
T Consensus 88 ~---------------~~~~~---~~d~~~-~~~~~sfD~V~~~~vL~hl~ 119 (204)
T TIGR03587 88 P---------------NINII---QGSLFD-PFKDNFFDLVLTKGVLIHIN 119 (204)
T ss_pred C---------------CCcEE---EeeccC-CCCCCCEEEEEECChhhhCC
Confidence 1 11122 245555 77899999999999998763
|
Members of this small clade are methyltransferases of the pfam08241 family and are observed within operons for the biosynthesis of pseudaminic acid, a component of exopolysaccharide and flagellin glycosyl modifications. Notable among these genomes is Pseudomonas fluorescens PfO-1. Possibly one of the two hydroxyl groups of pseudaminic acid, at positions 4 and 8 is converted to a methoxy group by this enzyme |
| >KOG2361 consensus Predicted methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.94 E-value=8.6e-05 Score=69.33 Aligned_cols=184 Identities=17% Similarity=0.238 Sum_probs=104.8
Q ss_pred HHHHHHHHHHHhhhhcCCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCc
Q 017747 32 VKHITLEALQQLYLEIDPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALP 111 (366)
Q Consensus 32 ~~~~l~~ai~~l~~~~~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~ 111 (366)
-..+|.+....+..-....+.+|+++|||.|.....+++ . .+.|.+.+|+.|-.++--+-+=++-.
T Consensus 53 dR~wL~~Efpel~~~~~~~~~~ilEvGCGvGNtvfPll~-------~-------~~n~~l~v~acDfsp~Ai~~vk~~~~ 118 (264)
T KOG2361|consen 53 DRNWLLREFPELLPVDEKSAETILEVGCGVGNTVFPLLK-------T-------SPNNRLKVYACDFSPRAIELVKKSSG 118 (264)
T ss_pred hhHHHHHhhHHhhCccccChhhheeeccCCCcccchhhh-------c-------CCCCCeEEEEcCCChHHHHHHHhccc
Confidence 355666666665543222345999999999987764321 1 24455999999987753222211110
Q ss_pred hhHHHHhhhcCCCCCCceEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHH
Q 017747 112 DFHRQLRNERGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVS 191 (366)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~ 191 (366)
+... ....|++-.-++=-...++.+|+|++.--+.| |-+|+.-
T Consensus 119 -----~~e~-----~~~afv~Dlt~~~~~~~~~~~svD~it~IFvL---SAi~pek------------------------ 161 (264)
T KOG2361|consen 119 -----YDES-----RVEAFVWDLTSPSLKEPPEEGSVDIITLIFVL---SAIHPEK------------------------ 161 (264)
T ss_pred -----cchh-----hhcccceeccchhccCCCCcCccceEEEEEEE---eccChHH------------------------
Confidence 0000 11223333323323455677788877654443 4444422
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhc-ccCccccC
Q 017747 192 KAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLV-AYHAHFYA 270 (366)
Q Consensus 192 ~ay~~Q~~~D~~~FL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d-~f~~P~y~ 270 (366)
+..=+....+-|||||.|++-=.|+.+-. .+.-- .+-.|+...+- .==.+.||
T Consensus 162 ----------~~~a~~nl~~llKPGG~llfrDYg~~Dla-----------qlRF~-----~~~~i~~nfYVRgDGT~~Yf 215 (264)
T KOG2361|consen 162 ----------MQSVIKNLRTLLKPGGSLLFRDYGRYDLA-----------QLRFK-----KGQCISENFYVRGDGTRAYF 215 (264)
T ss_pred ----------HHHHHHHHHHHhCCCcEEEEeecccchHH-----------HHhcc-----CCceeecceEEccCCceeee
Confidence 22225577889999999999887776521 11110 22223322111 11357799
Q ss_pred CCHHHHHHHHhhcCceEEeeEEE
Q 017747 271 PSKEEIEGEVGREGSFKLDQLDM 293 (366)
Q Consensus 271 ps~eEv~~~i~~~gsf~i~~~e~ 293 (366)
.+.+|++.++.++| |...+++.
T Consensus 216 F~~eeL~~~f~~ag-f~~~~~~~ 237 (264)
T KOG2361|consen 216 FTEEELDELFTKAG-FEEVQLEV 237 (264)
T ss_pred ccHHHHHHHHHhcc-cchhcccc
Confidence 99999999999999 77665554
|
|
| >TIGR00537 hemK_rel_arch HemK-related putative methylase | Back alignment and domain information |
|---|
Probab=97.85 E-value=6.8e-05 Score=66.96 Aligned_cols=125 Identities=14% Similarity=0.127 Sum_probs=68.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
+..+|+|+|||+|..++.+ .+. . .+++..|+....-..+-+.+. . .+ . ++
T Consensus 19 ~~~~vLdlG~G~G~~~~~l--------~~~--------~--~~v~~vD~s~~~~~~a~~~~~-------~-~~---~-~~ 68 (179)
T TIGR00537 19 KPDDVLEIGAGTGLVAIRL--------KGK--------G--KCILTTDINPFAVKELRENAK-------L-NN---V-GL 68 (179)
T ss_pred CCCeEEEeCCChhHHHHHH--------Hhc--------C--CEEEEEECCHHHHHHHHHHHH-------H-cC---C-ce
Confidence 3468999999999988642 121 1 278899986532222211111 0 00 1 12
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
..+.+++++. +.+++|+++|+..+|.....+.. .+.....+..| ..-...+..||+.-
T Consensus 69 --~~~~~d~~~~--~~~~fD~Vi~n~p~~~~~~~~~~-~~~~~~~~~~~-----------------~~~~~~~~~~l~~~ 126 (179)
T TIGR00537 69 --DVVMTDLFKG--VRGKFDVILFNPPYLPLEDDLRR-GDWLDVAIDGG-----------------KDGRKVIDRFLDEL 126 (179)
T ss_pred --EEEEcccccc--cCCcccEEEECCCCCCCcchhcc-cchhhhhhhcC-----------------CchHHHHHHHHHhH
Confidence 1123465553 34599999999888765432211 00000000000 00012356788888
Q ss_pred HHHhccCceEEEEeecC
Q 017747 210 SEELVVGGRMVLILLGR 226 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~ 226 (366)
.+-|+|||++++...+.
T Consensus 127 ~~~Lk~gG~~~~~~~~~ 143 (179)
T TIGR00537 127 PEILKEGGRVQLIQSSL 143 (179)
T ss_pred HHhhCCCCEEEEEEecc
Confidence 89999999999987444
|
The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. This model represents an archaeal and eukaryotic protein family that lacks an N-terminal domain found in HemK and its eubacterial homologs. It is found in a single copy in the first six completed archaeal and eukaryotic genomes. |
| >TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit | Back alignment and domain information |
|---|
Probab=97.84 E-value=2e-05 Score=65.01 Aligned_cols=22 Identities=32% Similarity=0.389 Sum_probs=18.5
Q ss_pred HHHHHHHHHHhccCceEEEEee
Q 017747 203 TLFLRSRSEELVVGGRMVLILL 224 (366)
Q Consensus 203 ~~FL~~Ra~EL~~GG~lvl~~~ 224 (366)
..+++.-.+.|+|||++++++.
T Consensus 102 ~~~l~~~~~~Lk~gG~li~~~~ 123 (124)
T TIGR02469 102 QEILEAIWRRLRPGGRIVLNAI 123 (124)
T ss_pred HHHHHHHHHHcCCCCEEEEEec
Confidence 3567888999999999999863
|
This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL. |
| >PRK09489 rsmC 16S ribosomal RNA m2G1207 methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.79 E-value=5.3e-05 Score=75.07 Aligned_cols=107 Identities=16% Similarity=0.312 Sum_probs=66.9
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceE
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVY 130 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 130 (366)
.-+|+|+|||+|..++. +.++ .|..+|+..|.........-+.+ .. ++ ....+
T Consensus 197 ~g~VLDlGCG~G~ls~~--------la~~--------~p~~~v~~vDis~~Al~~A~~nl-------~~-n~---l~~~~ 249 (342)
T PRK09489 197 KGKVLDVGCGAGVLSAV--------LARH--------SPKIRLTLSDVSAAALESSRATL-------AA-NG---LEGEV 249 (342)
T ss_pred CCeEEEeccCcCHHHHH--------HHHh--------CCCCEEEEEECCHHHHHHHHHHH-------HH-cC---CCCEE
Confidence 35899999999998864 3222 34578999998643222221111 11 11 11111
Q ss_pred EeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 017747 131 IAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRS 210 (366)
Q Consensus 131 ~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra 210 (366)
++++.+.. .++++|+++|+-.+||.-.. + ..+...|++.-+
T Consensus 250 ---~~~D~~~~--~~~~fDlIvsNPPFH~g~~~-----~-----------------------------~~~~~~~i~~a~ 290 (342)
T PRK09489 250 ---FASNVFSD--IKGRFDMIISNPPFHDGIQT-----S-----------------------------LDAAQTLIRGAV 290 (342)
T ss_pred ---EEcccccc--cCCCccEEEECCCccCCccc-----c-----------------------------HHHHHHHHHHHH
Confidence 22344443 36789999999999973210 0 134567788889
Q ss_pred HHhccCceEEEEe
Q 017747 211 EELVVGGRMVLIL 223 (366)
Q Consensus 211 ~EL~~GG~lvl~~ 223 (366)
+-|+|||.|++..
T Consensus 291 ~~LkpgG~L~iVa 303 (342)
T PRK09489 291 RHLNSGGELRIVA 303 (342)
T ss_pred HhcCcCCEEEEEE
Confidence 9999999999875
|
|
| >PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.79 E-value=3.1e-05 Score=71.00 Aligned_cols=82 Identities=12% Similarity=0.049 Sum_probs=46.6
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce-
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV- 129 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~- 129 (366)
..+|+|+|||+|..|..+...+ .+.-+|+..|...+.-...-+.+. ..+. ..++
T Consensus 73 ~~~VLDiG~GsG~~~~~la~~~---------------~~~g~V~~iD~~~~~~~~a~~~l~--------~~~~--~~~v~ 127 (205)
T PRK13944 73 GMKILEVGTGSGYQAAVCAEAI---------------ERRGKVYTVEIVKELAIYAAQNIE--------RLGY--WGVVE 127 (205)
T ss_pred CCEEEEECcCccHHHHHHHHhc---------------CCCCEEEEEeCCHHHHHHHHHHHH--------HcCC--CCcEE
Confidence 4799999999999986532211 112578888886542222211111 1111 1122
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccc
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWL 160 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWl 160 (366)
+.. +++.+-+.+.+++|.+++..+++++
T Consensus 128 ~~~---~d~~~~~~~~~~fD~Ii~~~~~~~~ 155 (205)
T PRK13944 128 VYH---GDGKRGLEKHAPFDAIIVTAAASTI 155 (205)
T ss_pred EEE---CCcccCCccCCCccEEEEccCcchh
Confidence 222 4554444455789999999887763
|
|
| >TIGR00091 tRNA (guanine-N(7)-)-methyltransferase | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00021 Score=64.87 Aligned_cols=113 Identities=18% Similarity=0.243 Sum_probs=68.8
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceE
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVY 130 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 130 (366)
.-+|+|+|||+|..+.. +.++ .|..+++..|+........-+.+. . .+ ..++-
T Consensus 17 ~~~ilDiGcG~G~~~~~--------la~~--------~p~~~v~gvD~~~~~l~~a~~~~~-------~-~~---l~ni~ 69 (194)
T TIGR00091 17 APLHLEIGCGKGRFLID--------MAKQ--------NPDKNFLGIEIHTPIVLAANNKAN-------K-LG---LKNLH 69 (194)
T ss_pred CceEEEeCCCccHHHHH--------HHHh--------CCCCCEEEEEeeHHHHHHHHHHHH-------H-hC---CCCEE
Confidence 45899999999999874 2222 355889999986533222221111 1 11 22442
Q ss_pred EeccCCCcc---cccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 131 IAGYPGSFY---GRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 131 ~~~vpgSFy---~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
+ +-++.. ..++|++++|.+++++..+|..+ .... ..+ .-..||+
T Consensus 70 ~--i~~d~~~~~~~~~~~~~~d~v~~~~pdpw~k~-~h~~----------~r~--------------------~~~~~l~ 116 (194)
T TIGR00091 70 V--LCGDANELLDKFFPDGSLSKVFLNFPDPWPKK-RHNK----------RRI--------------------TQPHFLK 116 (194)
T ss_pred E--EccCHHHHHHhhCCCCceeEEEEECCCcCCCC-Cccc----------ccc--------------------CCHHHHH
Confidence 2 223443 34467889999999999899433 1100 000 0134677
Q ss_pred HHHHHhccCceEEEEe
Q 017747 208 SRSEELVVGGRMVLIL 223 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~ 223 (366)
.-++-|+|||.+++..
T Consensus 117 ~~~r~LkpgG~l~~~t 132 (194)
T TIGR00091 117 EYANVLKKGGVIHFKT 132 (194)
T ss_pred HHHHHhCCCCEEEEEe
Confidence 7899999999999886
|
In E. coli, this protein flanks the DNA repair protein MutY, also called micA. |
| >PLN02585 magnesium protoporphyrin IX methyltransferase | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00078 Score=66.06 Aligned_cols=82 Identities=10% Similarity=0.150 Sum_probs=46.5
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
+..+|+|+|||+|.+++.+ .++ ..+|+..|+..+.....-+..... .....+. ....
T Consensus 144 ~~~~VLDlGcGtG~~a~~l--------a~~----------g~~V~gvD~S~~ml~~A~~~~~~~---~~~~~~~--~~~~ 200 (315)
T PLN02585 144 AGVTVCDAGCGTGSLAIPL--------ALE----------GAIVSASDISAAMVAEAERRAKEA---LAALPPE--VLPK 200 (315)
T ss_pred CCCEEEEecCCCCHHHHHH--------HHC----------CCEEEEEECCHHHHHHHHHHHHhc---ccccccc--cceE
Confidence 3579999999999998752 221 157899999876544333222110 0000000 1112
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccc
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWL 160 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWl 160 (366)
|..+ +. +. .++++|+++|+.++|++
T Consensus 201 f~~~---Dl-~~--l~~~fD~Vv~~~vL~H~ 225 (315)
T PLN02585 201 FEAN---DL-ES--LSGKYDTVTCLDVLIHY 225 (315)
T ss_pred EEEc---ch-hh--cCCCcCEEEEcCEEEec
Confidence 3332 22 12 26889999999998763
|
|
| >KOG1270 consensus Methyltransferases [Coenzyme transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00012 Score=69.29 Aligned_cols=77 Identities=19% Similarity=0.213 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHH
Q 017747 200 EDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGE 279 (366)
Q Consensus 200 ~D~~~FL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~ 279 (366)
+|...||.+.++-|+|||+|+++..-|.=. +-...- .+.+.....|-.|.- .+-=|++++|+..+
T Consensus 172 ~dp~~~l~~l~~~lkP~G~lfittinrt~l--S~~~~i----~~~E~vl~ivp~Gth---------~~ekfi~p~e~~~~ 236 (282)
T KOG1270|consen 172 KDPQEFLNCLSALLKPNGRLFITTINRTIL--SFAGTI----FLAEIVLRIVPKGTH---------TWEKFINPEELTSI 236 (282)
T ss_pred hCHHHHHHHHHHHhCCCCceEeeehhhhHH--Hhhccc----cHHHHHHHhcCCCCc---------CHHHcCCHHHHHHH
Confidence 466778899999999999999999877422 100111 122222336667743 34457899999999
Q ss_pred HhhcCceEEeeEE
Q 017747 280 VGREGSFKLDQLD 292 (366)
Q Consensus 280 i~~~gsf~i~~~e 292 (366)
++.++ +.+..+.
T Consensus 237 l~~~~-~~v~~v~ 248 (282)
T KOG1270|consen 237 LNANG-AQVNDVV 248 (282)
T ss_pred HHhcC-cchhhhh
Confidence 99987 7765554
|
|
| >PF05401 NodS: Nodulation protein S (NodS); InterPro: IPR008715 This entry consists of nodulation S (NodS) proteins | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00029 Score=64.24 Aligned_cols=104 Identities=23% Similarity=0.352 Sum_probs=61.5
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+.--+++|+|||.|.+|.. |..+| -.+...|+...--....+.+. . .++
T Consensus 42 ~ry~~alEvGCs~G~lT~~--------LA~rC----------d~LlavDis~~Al~~Ar~Rl~-----------~--~~~ 90 (201)
T PF05401_consen 42 RRYRRALEVGCSIGVLTER--------LAPRC----------DRLLAVDISPRALARARERLA-----------G--LPH 90 (201)
T ss_dssp SSEEEEEEE--TTSHHHHH--------HGGGE----------EEEEEEES-HHHHHHHHHHTT-----------T---SS
T ss_pred cccceeEecCCCccHHHHH--------HHHhh----------CceEEEeCCHHHHHHHHHhcC-----------C--CCC
Confidence 3457899999999999975 33332 345666664321111111111 1 222
Q ss_pred e-EEec-cCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAG-YPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 129 ~-f~~~-vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
+ |..+ +|. ..|++++|+++-+-.+++|+. ..|+..++
T Consensus 91 V~~~~~dvp~-----~~P~~~FDLIV~SEVlYYL~~------------------------------------~~~L~~~l 129 (201)
T PF05401_consen 91 VEWIQADVPE-----FWPEGRFDLIVLSEVLYYLDD------------------------------------AEDLRAAL 129 (201)
T ss_dssp EEEEES-TTT--------SS-EEEEEEES-GGGSSS------------------------------------HHHHHHHH
T ss_pred eEEEECcCCC-----CCCCCCeeEEEEehHhHcCCC------------------------------------HHHHHHHH
Confidence 2 3332 442 359999999999999999865 23566777
Q ss_pred HHHHHHhccCceEEEEee
Q 017747 207 RSRSEELVVGGRMVLILL 224 (366)
Q Consensus 207 ~~Ra~EL~~GG~lvl~~~ 224 (366)
..-.+-|.|||.||+.-.
T Consensus 130 ~~l~~~L~pgG~LV~g~~ 147 (201)
T PF05401_consen 130 DRLVAALAPGGHLVFGHA 147 (201)
T ss_dssp HHHHHTEEEEEEEEEEEE
T ss_pred HHHHHHhCCCCEEEEEEe
Confidence 788899999999999754
|
The products of the rhizobial nodulation genes are involved in the biosynthesis of lipochitin oligosaccharides (LCOs), which are host-specific signal molecules required for nodule formation. NodS is an S-adenosyl-L-methionine (SAM)-dependent methyltransferase involved in N methylation of LCOs. NodS uses N-deacetylated chitooligosaccharides, the products of the NodBC proteins, as its methyl acceptors [].; GO: 0008757 S-adenosylmethionine-dependent methyltransferase activity, 0009312 oligosaccharide biosynthetic process, 0009877 nodulation; PDB: 3OFK_D 3OFJ_A. |
| >TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00073 Score=62.57 Aligned_cols=152 Identities=13% Similarity=0.094 Sum_probs=87.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhh--h-cCCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRN--E-RGGGSS 126 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~--~-~~~~~~ 126 (366)
...+|+|+|||.|+|++. +.++ ..+|+..|+...-...+++...-... ... . ...+..
T Consensus 34 ~~~rvLd~GCG~G~da~~--------LA~~----------G~~V~gvD~S~~Ai~~~~~~~~~~~~-~~~~~~~~~~~~~ 94 (213)
T TIGR03840 34 AGARVFVPLCGKSLDLAW--------LAEQ----------GHRVLGVELSEIAVEQFFAENGLTPT-VTQQGEFTRYRAG 94 (213)
T ss_pred CCCeEEEeCCCchhHHHH--------HHhC----------CCeEEEEeCCHHHHHHHHHHcCCCcc-eeccccceeeecC
Confidence 347999999999999985 3232 28899999977644443321110000 000 0 000000
Q ss_pred CceEEeccCCCcccccC-CCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 017747 127 PSVYIAGYPGSFYGRLF-PNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLF 205 (366)
Q Consensus 127 ~~~f~~~vpgSFy~~lf-p~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~F 205 (366)
+--|.. ++|++.-. +...+|.++-..++|= +|+ .+...+
T Consensus 95 ~v~~~~---~D~~~~~~~~~~~fD~i~D~~~~~~---l~~----------------------------------~~R~~~ 134 (213)
T TIGR03840 95 NIEIFC---GDFFALTAADLGPVDAVYDRAALIA---LPE----------------------------------EMRQRY 134 (213)
T ss_pred ceEEEE---ccCCCCCcccCCCcCEEEechhhcc---CCH----------------------------------HHHHHH
Confidence 111222 35544221 1346888888887772 343 233445
Q ss_pred HHHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCc
Q 017747 206 LRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGS 285 (366)
Q Consensus 206 L~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gs 285 (366)
++.-.+-|+|||++++..+...... ..-|-|.-+++|+++.+.. +
T Consensus 135 ~~~l~~lLkpgG~~ll~~~~~~~~~---------------------------------~~gpp~~~~~~eL~~~f~~-~- 179 (213)
T TIGR03840 135 AAHLLALLPPGARQLLITLDYDQSE---------------------------------MAGPPFSVSPAEVEALYGG-H- 179 (213)
T ss_pred HHHHHHHcCCCCeEEEEEEEcCCCC---------------------------------CCCcCCCCCHHHHHHHhcC-C-
Confidence 6788999999998777766543210 0124477889999988863 2
Q ss_pred eEEeeEEEEe
Q 017747 286 FKLDQLDMFQ 295 (366)
Q Consensus 286 f~i~~~e~~~ 295 (366)
|+|..++..+
T Consensus 180 ~~i~~~~~~~ 189 (213)
T TIGR03840 180 YEIELLESRD 189 (213)
T ss_pred ceEEEEeecc
Confidence 7887776544
|
Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity. |
| >TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.0001 Score=67.95 Aligned_cols=80 Identities=11% Similarity=0.027 Sum_probs=44.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|.+|..+ .+.. .++.+|+..|.-..-...+-+. + ...+. .+..
T Consensus 77 ~~~~VLDiG~GsG~~a~~l--------a~~~-------~~~g~V~~vD~~~~~~~~A~~~-------~-~~~g~--~~v~ 131 (215)
T TIGR00080 77 PGMKVLEIGTGSGYQAAVL--------AEIV-------GRDGLVVSIERIPELAEKAERR-------L-RKLGL--DNVI 131 (215)
T ss_pred CcCEEEEECCCccHHHHHH--------HHHh-------CCCCEEEEEeCCHHHHHHHHHH-------H-HHCCC--CCeE
Confidence 4579999999999999752 2221 2236788888754221111111 1 11111 1122
Q ss_pred EEeccCCCcccccCCCCcccEEEccccc
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSL 157 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~al 157 (366)
++. ++..+-+.+.+.+|++++..+.
T Consensus 132 ~~~---~d~~~~~~~~~~fD~Ii~~~~~ 156 (215)
T TIGR00080 132 VIV---GDGTQGWEPLAPYDRIYVTAAG 156 (215)
T ss_pred EEE---CCcccCCcccCCCCEEEEcCCc
Confidence 333 4554444455689999877553
|
Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt. |
| >TIGR03534 RF_mod_PrmC protein-(glutamine-N5) methyltransferase, release factor-specific | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00015 Score=67.59 Aligned_cols=130 Identities=17% Similarity=0.225 Sum_probs=70.4
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
.+.+|+|+|||+|..++.+. +. .|..+++..|........+-+.+. ..+ ..++
T Consensus 87 ~~~~ilDig~G~G~~~~~l~--------~~--------~~~~~v~~iD~~~~~~~~a~~~~~--------~~~---~~~~ 139 (251)
T TIGR03534 87 GPLRVLDLGTGSGAIALALA--------KE--------RPDARVTAVDISPEALAVARKNAA--------RLG---LDNV 139 (251)
T ss_pred CCCeEEEEeCcHhHHHHHHH--------HH--------CCCCEEEEEECCHHHHHHHHHHHH--------HcC---CCeE
Confidence 35689999999999887532 21 234789999986543332222111 111 1122
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHH-HHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAY-FKQFQEDFTLFLRS 208 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay-~~Q~~~D~~~FL~~ 208 (366)
..+.+++.+ .++++++|+++++--.+..+.... +... + ..-.+. ...+ ......++..|++.
T Consensus 140 --~~~~~d~~~-~~~~~~fD~Vi~npPy~~~~~~~~-~~~~---------~--~~~e~~--~~~~~~~~~~~~~~~~i~~ 202 (251)
T TIGR03534 140 --TFLQSDWFE-PLPGGKFDLIVSNPPYIPEADIHL-LDPE---------V--RFHEPR--LALFGGEDGLDFYRRIIAQ 202 (251)
T ss_pred --EEEECchhc-cCcCCceeEEEECCCCCchhhhhh-cChh---------h--hhcCCH--HHHcCCCcHHHHHHHHHHH
Confidence 122346655 467889999999644433222110 0000 0 000000 0000 11224567789999
Q ss_pred HHHHhccCceEEEEe
Q 017747 209 RSEELVVGGRMVLIL 223 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~ 223 (366)
-.+.|+|||++++..
T Consensus 203 ~~~~L~~gG~~~~~~ 217 (251)
T TIGR03534 203 APRLLKPGGWLLLEI 217 (251)
T ss_pred HHHhcccCCEEEEEE
Confidence 999999999999864
|
Members of this protein family are HemK (PrmC), a protein once thought to be involved in heme biosynthesis but now recognized to be a protein-glutamine methyltransferase that modifies the peptide chain release factors. All members of the seed alignment are encoded next to the release factor 1 gene (prfA) and confirmed by phylogenetic analysis. SIMBAL analysis (manuscript in prep.) shows the motif [LIV]PRx[DE]TE (in Escherichia coli, IPRPDTE) confers specificity for the release factors rather than for ribosomal protein L3. |
| >PRK14121 tRNA (guanine-N(7)-)-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00012 Score=73.44 Aligned_cols=110 Identities=22% Similarity=0.231 Sum_probs=69.8
Q ss_pred eEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceEE
Q 017747 52 INIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVYI 131 (366)
Q Consensus 52 ~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~ 131 (366)
-.++|+|||+|..++. +.++ .|+..++.-|+.......+-+... . .+ ..++.+
T Consensus 124 p~vLEIGcGsG~~ll~--------lA~~--------~P~~~~iGIEI~~~~i~~a~~ka~-------~-~g---L~NV~~ 176 (390)
T PRK14121 124 KILIEIGFGSGRHLLY--------QAKN--------NPNKLFIGIEIHTPSIEQVLKQIE-------L-LN---LKNLLI 176 (390)
T ss_pred CeEEEEcCcccHHHHH--------HHHh--------CCCCCEEEEECCHHHHHHHHHHHH-------H-cC---CCcEEE
Confidence 4799999999998864 3232 467899999986543333322211 1 11 234433
Q ss_pred eccCCCc--ccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 132 AGYPGSF--YGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 132 ~~vpgSF--y~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
.- ++. .-..+|++++|.++.++...|..+ +. ++. -...||..-
T Consensus 177 i~--~DA~~ll~~~~~~s~D~I~lnFPdPW~Kk-rH-----------------------------RRl---v~~~fL~e~ 221 (390)
T PRK14121 177 IN--YDARLLLELLPSNSVEKIFVHFPVPWDKK-PH-----------------------------RRV---ISEDFLNEA 221 (390)
T ss_pred EE--CCHHHhhhhCCCCceeEEEEeCCCCcccc-ch-----------------------------hhc---cHHHHHHHH
Confidence 32 333 124589999999998877777222 10 000 125678888
Q ss_pred HHHhccCceEEEEe
Q 017747 210 SEELVVGGRMVLIL 223 (366)
Q Consensus 210 a~EL~~GG~lvl~~ 223 (366)
++-|+|||.+.+.+
T Consensus 222 ~RvLkpGG~l~l~T 235 (390)
T PRK14121 222 LRVLKPGGTLELRT 235 (390)
T ss_pred HHHcCCCcEEEEEE
Confidence 99999999999986
|
|
| >PRK15001 SAM-dependent 23S ribosomal RNA mG1835 methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00011 Score=73.80 Aligned_cols=111 Identities=13% Similarity=0.114 Sum_probs=64.6
Q ss_pred eEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceEE
Q 017747 52 INIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVYI 131 (366)
Q Consensus 52 ~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~ 131 (366)
.+|+|+|||+|..++. +.++ .|..+|++.|...-.....-+ ....+ +.....++
T Consensus 230 ~~VLDLGCGtGvi~i~--------la~~--------~P~~~V~~vD~S~~Av~~A~~-------N~~~n-~~~~~~~v-- 283 (378)
T PRK15001 230 GEIVDLGCGNGVIGLT--------LLDK--------NPQAKVVFVDESPMAVASSRL-------NVETN-MPEALDRC-- 283 (378)
T ss_pred CeEEEEeccccHHHHH--------HHHh--------CCCCEEEEEECCHHHHHHHHH-------HHHHc-CcccCceE--
Confidence 5899999999998864 3232 356899999986421111111 11111 10000111
Q ss_pred eccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017747 132 AGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSE 211 (366)
Q Consensus 132 ~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~ 211 (366)
..+.++.+..+ ++.++|+++|+--+|+...++. .+ ...+++.-.+
T Consensus 284 ~~~~~D~l~~~-~~~~fDlIlsNPPfh~~~~~~~-----------------------~i-----------a~~l~~~a~~ 328 (378)
T PRK15001 284 EFMINNALSGV-EPFRFNAVLCNPPFHQQHALTD-----------------------NV-----------AWEMFHHARR 328 (378)
T ss_pred EEEEccccccC-CCCCEEEEEECcCcccCccCCH-----------------------HH-----------HHHHHHHHHH
Confidence 11224555443 5678999999988887433211 01 1235555678
Q ss_pred HhccCceEEEEe
Q 017747 212 ELVVGGRMVLIL 223 (366)
Q Consensus 212 EL~~GG~lvl~~ 223 (366)
-|+|||.|++..
T Consensus 329 ~LkpGG~L~iV~ 340 (378)
T PRK15001 329 CLKINGELYIVA 340 (378)
T ss_pred hcccCCEEEEEE
Confidence 899999999984
|
|
| >PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.0002 Score=66.14 Aligned_cols=81 Identities=12% Similarity=0.019 Sum_probs=45.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..|..+. +.. .+.-+|+.-|.-.......-+.+ . ..+ ..++
T Consensus 76 ~g~~VLdIG~GsG~~t~~la--------~~~-------~~~~~V~~vE~~~~~~~~a~~~l-------~-~~g---~~~v 129 (212)
T PRK13942 76 EGMKVLEIGTGSGYHAAVVA--------EIV-------GKSGKVVTIERIPELAEKAKKTL-------K-KLG---YDNV 129 (212)
T ss_pred CcCEEEEECCcccHHHHHHH--------Hhc-------CCCCEEEEEeCCHHHHHHHHHHH-------H-HcC---CCCe
Confidence 45799999999999996532 211 12357888887542221111111 1 111 2232
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccc
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLH 158 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alh 158 (366)
..+-|+..+-+.+.+.+|.+++..+.+
T Consensus 130 --~~~~gd~~~~~~~~~~fD~I~~~~~~~ 156 (212)
T PRK13942 130 --EVIVGDGTLGYEENAPYDRIYVTAAGP 156 (212)
T ss_pred --EEEECCcccCCCcCCCcCEEEECCCcc
Confidence 122245555556678899999887654
|
|
| >PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00012 Score=67.06 Aligned_cols=80 Identities=10% Similarity=0.025 Sum_probs=43.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..|..+ ... . -+++.-|...+....+-+.+. + .+ ..++
T Consensus 78 ~~~~VLeiG~GsG~~t~~l-a~~------------~-----~~v~~vd~~~~~~~~a~~~~~-------~-~~---~~~v 128 (212)
T PRK00312 78 PGDRVLEIGTGSGYQAAVL-AHL------------V-----RRVFSVERIKTLQWEAKRRLK-------Q-LG---LHNV 128 (212)
T ss_pred CCCEEEEECCCccHHHHHH-HHH------------h-----CEEEEEeCCHHHHHHHHHHHH-------H-CC---CCce
Confidence 4589999999999998632 111 0 246666765332222211111 1 11 1122
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccc
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWL 160 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWl 160 (366)
..+.+++.+.+.+.+++|++++..+++++
T Consensus 129 --~~~~~d~~~~~~~~~~fD~I~~~~~~~~~ 157 (212)
T PRK00312 129 --SVRHGDGWKGWPAYAPFDRILVTAAAPEI 157 (212)
T ss_pred --EEEECCcccCCCcCCCcCEEEEccCchhh
Confidence 22334554444445789999998776653
|
|
| >PF05175 MTS: Methyltransferase small domain; InterPro: IPR007848 This domain is found in ribosomal RNA small subunit methyltransferase C and in other methyltransferases | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00013 Score=64.93 Aligned_cols=110 Identities=21% Similarity=0.352 Sum_probs=64.9
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++. +.++ .|..+|++.|.-..-...+-+.+ .. ++ ...
T Consensus 31 ~~~~vLDlG~G~G~i~~~--------la~~--------~~~~~v~~vDi~~~a~~~a~~n~-------~~-n~---~~~- 82 (170)
T PF05175_consen 31 KGGRVLDLGCGSGVISLA--------LAKR--------GPDAKVTAVDINPDALELAKRNA-------ER-NG---LEN- 82 (170)
T ss_dssp TTCEEEEETSTTSHHHHH--------HHHT--------STCEEEEEEESBHHHHHHHHHHH-------HH-TT---CTT-
T ss_pred cCCeEEEecCChHHHHHH--------HHHh--------CCCCEEEEEcCCHHHHHHHHHHH-------Hh-cC---ccc-
Confidence 457899999999999875 3332 34578999998643222221111 11 11 222
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
+..+..+.++.+ +++++|+++|+-=+|+-.+ .. ..-+..|++.-
T Consensus 83 -v~~~~~d~~~~~-~~~~fD~Iv~NPP~~~~~~--------------------------~~--------~~~~~~~i~~a 126 (170)
T PF05175_consen 83 -VEVVQSDLFEAL-PDGKFDLIVSNPPFHAGGD--------------------------DG--------LDLLRDFIEQA 126 (170)
T ss_dssp -EEEEESSTTTTC-CTTCEEEEEE---SBTTSH--------------------------CH--------HHHHHHHHHHH
T ss_pred -cccccccccccc-cccceeEEEEccchhcccc--------------------------cc--------hhhHHHHHHHH
Confidence 223335676655 4899999999743222110 00 12345667777
Q ss_pred HHHhccCceEEEEe
Q 017747 210 SEELVVGGRMVLIL 223 (366)
Q Consensus 210 a~EL~~GG~lvl~~ 223 (366)
.+-|+|||.|++..
T Consensus 127 ~~~Lk~~G~l~lv~ 140 (170)
T PF05175_consen 127 RRYLKPGGRLFLVI 140 (170)
T ss_dssp HHHEEEEEEEEEEE
T ss_pred HHhccCCCEEEEEe
Confidence 89999999998865
|
; GO: 0008168 methyltransferase activity; PDB: 1WY7_A 1DUS_A 2OZV_A 2PJD_A 1VQ1_A 1NV9_A 1SG9_C 1NV8_A 3Q87_B 3DMF_A .... |
| >PRK14967 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00046 Score=63.97 Aligned_cols=168 Identities=15% Similarity=0.119 Sum_probs=85.0
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceE
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVY 130 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 130 (366)
..+|+|+|||+|..++.+ .+. +..+++..|+........-+.+ .. .+ . ++
T Consensus 37 ~~~vLDlGcG~G~~~~~l--------a~~---------~~~~v~~vD~s~~~l~~a~~n~-------~~-~~---~-~~- 86 (223)
T PRK14967 37 GRRVLDLCTGSGALAVAA--------AAA---------GAGSVTAVDISRRAVRSARLNA-------LL-AG---V-DV- 86 (223)
T ss_pred CCeEEEecCCHHHHHHHH--------HHc---------CCCeEEEEECCHHHHHHHHHHH-------HH-hC---C-ee-
Confidence 469999999999987642 111 1147888888653222111111 00 01 1 11
Q ss_pred EeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 017747 131 IAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRS 210 (366)
Q Consensus 131 ~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra 210 (366)
..+-+++.. .++++++|+++++--.+..+... ..+ . +....|....+ -..++..|++.-.
T Consensus 87 -~~~~~d~~~-~~~~~~fD~Vi~npPy~~~~~~~--~~~-~----~~~~~~~~~~~-----------~~~~~~~~l~~a~ 146 (223)
T PRK14967 87 -DVRRGDWAR-AVEFRPFDVVVSNPPYVPAPPDA--PPS-R----GPARAWDAGPD-----------GRAVLDRLCDAAP 146 (223)
T ss_pred -EEEECchhh-hccCCCeeEEEECCCCCCCCccc--ccc-c----ChhHhhhCCCc-----------HHHHHHHHHHHHH
Confidence 122256654 46788999999875333221110 000 0 00000000000 1235677888888
Q ss_pred HHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcC
Q 017747 211 EELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREG 284 (366)
Q Consensus 211 ~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~g 284 (366)
+-|+|||++++......+ ..++++.+...| +..+.+.+..+|+ .+..-.....+++.|
T Consensus 147 ~~Lk~gG~l~~~~~~~~~--------------~~~~~~~l~~~g-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 204 (223)
T PRK14967 147 ALLAPGGSLLLVQSELSG--------------VERTLTRLSEAG-LDAEVVASQWIPF-GPVLRARAAWLERRG 204 (223)
T ss_pred HhcCCCcEEEEEEecccC--------------HHHHHHHHHHCC-CCeEEEEeeccCc-cHHHHHHHHHHHHcC
Confidence 999999999987544321 223334333344 3444455555663 232233445677777
|
|
| >PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00015 Score=65.12 Aligned_cols=35 Identities=11% Similarity=0.321 Sum_probs=25.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPT 100 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~ 100 (366)
...+|+|+|||+|..++.+ .++ .|..+++..|...
T Consensus 31 ~~~~vLDiG~G~G~~~~~l--------a~~--------~~~~~v~~vD~s~ 65 (187)
T PRK08287 31 RAKHLIDVGAGTGSVSIEA--------ALQ--------FPSLQVTAIERNP 65 (187)
T ss_pred CCCEEEEECCcCCHHHHHH--------HHH--------CCCCEEEEEECCH
Confidence 4579999999999998753 221 2347899999854
|
|
| >PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00035 Score=63.47 Aligned_cols=101 Identities=16% Similarity=0.191 Sum_probs=60.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++.+ ... .|..+|+.-|.....-..+-+.. ...+ ..++
T Consensus 45 ~g~~VLDiGcGtG~~al~l--------a~~--------~~~~~V~giD~s~~~l~~A~~~~--------~~~~---l~~i 97 (187)
T PRK00107 45 GGERVLDVGSGAGFPGIPL--------AIA--------RPELKVTLVDSLGKKIAFLREVA--------AELG---LKNV 97 (187)
T ss_pred CCCeEEEEcCCCCHHHHHH--------HHH--------CCCCeEEEEeCcHHHHHHHHHHH--------HHcC---CCCE
Confidence 3689999999999988753 221 23478999998653222211111 1111 1122
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
..+.++..+ +-+++++|++++... .++..|++..
T Consensus 98 --~~~~~d~~~-~~~~~~fDlV~~~~~-------------------------------------------~~~~~~l~~~ 131 (187)
T PRK00107 98 --TVVHGRAEE-FGQEEKFDVVTSRAV-------------------------------------------ASLSDLVELC 131 (187)
T ss_pred --EEEeccHhh-CCCCCCccEEEEccc-------------------------------------------cCHHHHHHHH
Confidence 222234433 333678999998520 1234467788
Q ss_pred HHHhccCceEEEEe
Q 017747 210 SEELVVGGRMVLIL 223 (366)
Q Consensus 210 a~EL~~GG~lvl~~ 223 (366)
++-|+|||++++..
T Consensus 132 ~~~LkpGG~lv~~~ 145 (187)
T PRK00107 132 LPLLKPGGRFLALK 145 (187)
T ss_pred HHhcCCCeEEEEEe
Confidence 89999999999885
|
|
| >PF00891 Methyltransf_2: O-methyltransferase; InterPro: IPR001077 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (AdoMet) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.0012 Score=61.68 Aligned_cols=104 Identities=25% Similarity=0.349 Sum_probs=69.8
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+..-+|+|+|+|+|..+.. +.++ .|.++++.-|||.. ++.... . .+
T Consensus 99 ~~~~~vvDvGGG~G~~~~~--------l~~~--------~P~l~~~v~Dlp~v--------~~~~~~------~----~r 144 (241)
T PF00891_consen 99 SGFKTVVDVGGGSGHFAIA--------LARA--------YPNLRATVFDLPEV--------IEQAKE------A----DR 144 (241)
T ss_dssp TTSSEEEEET-TTSHHHHH--------HHHH--------STTSEEEEEE-HHH--------HCCHHH------T----TT
T ss_pred cCccEEEeccCcchHHHHH--------HHHH--------CCCCcceeeccHhh--------hhcccc------c----cc
Confidence 3456899999999998864 3333 46689999999852 111111 1 12
Q ss_pred eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
+ ..+||+|+ .-+|. .|+++-.+.||=.++ +|-..+|+.
T Consensus 145 v--~~~~gd~f-~~~P~--~D~~~l~~vLh~~~d-------------------------------------~~~~~iL~~ 182 (241)
T PF00891_consen 145 V--EFVPGDFF-DPLPV--ADVYLLRHVLHDWSD-------------------------------------EDCVKILRN 182 (241)
T ss_dssp E--EEEES-TT-TCCSS--ESEEEEESSGGGS-H-------------------------------------HHHHHHHHH
T ss_pred c--ccccccHH-hhhcc--ccceeeehhhhhcch-------------------------------------HHHHHHHHH
Confidence 2 34679999 66787 999999999975332 344567889
Q ss_pred HHHHhccC--ceEEEEeecCCC
Q 017747 209 RSEELVVG--GRMVLILLGRIG 228 (366)
Q Consensus 209 Ra~EL~~G--G~lvl~~~g~~~ 228 (366)
-++.|+|| |++++.=.-.++
T Consensus 183 ~~~al~pg~~g~llI~e~~~~~ 204 (241)
T PF00891_consen 183 AAAALKPGKDGRLLIIEMVLPD 204 (241)
T ss_dssp HHHHSEECTTEEEEEEEEEECS
T ss_pred HHHHhCCCCCCeEEEEeeccCC
Confidence 99999999 999988665544
|
The reaction is catalysed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. Three classes of DNA Mtases transfer the methyl group from AdoMet to the target base to form either N-6-methyladenine, or N-4-methylcytosine, or C-5- methylcytosine. In C-5-cytosine Mtases, ten conserved motifs are arranged in the same order []. Motif I (a glycine-rich or closely related consensus sequence; FAGxGG in M.HhaI []), shared by other AdoMet-Mtases [], is part of the cofactor binding site and motif IV (PCQ) is part of the catalytic site. In contrast, sequence comparison among N-6-adenine and N-4-cytosine Mtases indicated two of the conserved segments [], although more conserved segments may be present. One of them corresponds to motif I in C-5-cytosine Mtases, and the other is named (D/N/S)PP(Y/F). Crystal structures are known for a number of Mtases [, , , ]. The cofactor binding sites are almost identical and the essential catalytic amino acids coincide. The comparable protein folding and the existence of equivalent amino acids in similar secondary and tertiary positions indicate that many (if not all) AdoMet-Mtases have a common catalytic domain structure. This permits tertiary structure prediction of other DNA, RNA, protein, and small-molecule AdoMet-Mtases from their amino acid sequences []. This domain includes a range of O-methyltransferases some of which utilise S-adenosyl methionine as substrate []. In prokaryotes, the major role of DNA methylation is to protect host DNA against degradation by restriction enzymes. In eukaryotes, DNA methylation has been implicated in the control of several cellular processes, including differentiation, gene regulation, and embryonic development. O-methyltransferases have a common catalytic domain structure, which might be universal among S-adenosyl-L-methionine (AdoMet)-dependent methyltransferases []. Comparative analysis of the predicted amino acid sequences of a number of plant O-methyltransferase cDNA clones show that they share some 32-71% sequence identity, and can be grouped according to the different compounds they utilise as substrates [].; GO: 0008171 O-methyltransferase activity; PDB: 1FPQ_A 1FP1_D 3P9K_B 3P9I_D 3P9C_A 3I53_A 3I5U_A 3I64_A 3I58_A 1ZG3_A .... |
| >PLN02232 ubiquinone biosynthesis methyltransferase | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00023 Score=62.76 Aligned_cols=108 Identities=13% Similarity=0.112 Sum_probs=63.5
Q ss_pred CCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 017747 136 GSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVV 215 (366)
Q Consensus 136 gSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~ 215 (366)
|+..+-.++++++|++++++++||+.+. ..+|+.-.+-|+|
T Consensus 33 ~d~~~lp~~~~~fD~v~~~~~l~~~~d~---------------------------------------~~~l~ei~rvLkp 73 (160)
T PLN02232 33 GDAIDLPFDDCEFDAVTMGYGLRNVVDR---------------------------------------LRAMKEMYRVLKP 73 (160)
T ss_pred echhhCCCCCCCeeEEEecchhhcCCCH---------------------------------------HHHHHHHHHHcCc
Confidence 3554444789999999999999997431 2345667899999
Q ss_pred CceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCcc----ccCCCHHHHHHHHhhcCceEEee
Q 017747 216 GGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAH----FYAPSKEEIEGEVGREGSFKLDQ 290 (366)
Q Consensus 216 GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P----~y~ps~eEv~~~i~~~gsf~i~~ 290 (366)
||++++.-++..+.... ..++..... .-++.-|.+... .+.+..- ..+++++|+.+++++.| |+..+
T Consensus 74 GG~l~i~d~~~~~~~~~----~~~~~~~~~--~~~~~~~~~~~~-~~~y~yl~~si~~f~~~~el~~ll~~aG-F~~~~ 144 (160)
T PLN02232 74 GSRVSILDFNKSNQSVT----TFMQGWMID--NVVVPVATVYDL-AKEYEYLKYSINGYLTGEELETLALEAG-FSSAC 144 (160)
T ss_pred CeEEEEEECCCCChHHH----HHHHHHHcc--chHhhhhHHhCC-hHHHHhHHHHHHHCcCHHHHHHHHHHcC-CCcce
Confidence 99999987776442110 001100000 000111111111 1122111 35899999999999999 86543
|
|
| >TIGR00438 rrmJ cell division protein FtsJ | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00059 Score=61.41 Aligned_cols=25 Identities=24% Similarity=0.246 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHhccCceEEEEee
Q 017747 200 EDFTLFLRSRSEELVVGGRMVLILL 224 (366)
Q Consensus 200 ~D~~~FL~~Ra~EL~~GG~lvl~~~ 224 (366)
.+...+|+.-.+-|+|||++++..+
T Consensus 123 ~~~~~~l~~~~~~LkpgG~lvi~~~ 147 (188)
T TIGR00438 123 DLVELALDIAKEVLKPKGNFVVKVF 147 (188)
T ss_pred HHHHHHHHHHHHHccCCCEEEEEEc
Confidence 4567788889999999999999753
|
|
| >PF06080 DUF938: Protein of unknown function (DUF938); InterPro: IPR010342 This family consists of several hypothetical proteins from both prokaryotes and eukaryotes | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0017 Score=59.71 Aligned_cols=157 Identities=16% Similarity=0.164 Sum_probs=93.7
Q ss_pred EEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceEEe
Q 017747 53 NIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVYIA 132 (366)
Q Consensus 53 ~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~~ 132 (366)
+|+++|||||--...+.. ..|.+++-=+|...+-+.++-.-+... .+.+ . .+++.+-
T Consensus 28 ~vLEiaSGtGqHa~~FA~----------------~lP~l~WqPSD~~~~~~~sI~a~~~~~--~~~N-v----~~P~~lD 84 (204)
T PF06080_consen 28 RVLEIASGTGQHAVYFAQ----------------ALPHLTWQPSDPDDNLRPSIRAWIAEA--GLPN-V----RPPLALD 84 (204)
T ss_pred eEEEEcCCccHHHHHHHH----------------HCCCCEEcCCCCChHHHhhHHHHHHhc--CCcc-c----CCCeEee
Confidence 699999999998765322 245688888999887666554322110 0000 0 1122221
Q ss_pred c-cCCCccc--ccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 133 G-YPGSFYG--RLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 133 ~-vpgSFy~--~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
+ .+..=.. -.++.+++|.+++.+.+|-.+- .. + ..+++.=
T Consensus 85 v~~~~w~~~~~~~~~~~~~D~i~~~N~lHI~p~---~~----------------------~------------~~lf~~a 127 (204)
T PF06080_consen 85 VSAPPWPWELPAPLSPESFDAIFCINMLHISPW---SA----------------------V------------EGLFAGA 127 (204)
T ss_pred cCCCCCccccccccCCCCcceeeehhHHHhcCH---HH----------------------H------------HHHHHHH
Confidence 1 1100001 1136789999999999999543 11 1 1234555
Q ss_pred HHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEE
Q 017747 210 SEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKL 288 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i 288 (366)
++-|++||.|++--+=..+...++.. +- .+...|+. -+.-+=.+..++|.++-++.| +++
T Consensus 128 ~~~L~~gG~L~~YGPF~~~G~~ts~S-N~---~FD~sLr~--------------rdp~~GiRD~e~v~~lA~~~G-L~l 187 (204)
T PF06080_consen 128 ARLLKPGGLLFLYGPFNRDGKFTSES-NA---AFDASLRS--------------RDPEWGIRDIEDVEALAAAHG-LEL 187 (204)
T ss_pred HHhCCCCCEEEEeCCcccCCEeCCcH-HH---HHHHHHhc--------------CCCCcCccCHHHHHHHHHHCC-Ccc
Confidence 89999999999886644443333332 22 34455553 234467899999999999999 554
|
The function of this family is unknown. |
| >PRK13255 thiopurine S-methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0043 Score=57.66 Aligned_cols=151 Identities=15% Similarity=0.162 Sum_probs=83.4
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCC----CC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGG----GS 125 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~----~~ 125 (366)
+..+|+|+|||.|+|++.+ .++ ..+|+..|+...-...+++... +.... ...+. .+
T Consensus 37 ~~~rvL~~gCG~G~da~~L--------A~~----------G~~V~avD~s~~Ai~~~~~~~~-l~~~~-~~~~~~~~~~~ 96 (218)
T PRK13255 37 AGSRVLVPLCGKSLDMLWL--------AEQ----------GHEVLGVELSELAVEQFFAENG-LTPQT-RQSGEFEHYQA 96 (218)
T ss_pred CCCeEEEeCCCChHhHHHH--------HhC----------CCeEEEEccCHHHHHHHHHHcC-CCccc-ccccccccccc
Confidence 3479999999999999853 221 2789999987654333332110 00000 00000 00
Q ss_pred CCceEEeccCCCcccccC-CCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHH
Q 017747 126 SPSVYIAGYPGSFYGRLF-PNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTL 204 (366)
Q Consensus 126 ~~~~f~~~vpgSFy~~lf-p~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~ 204 (366)
..-.+.. +++++-.. ....+|+++-..++|= +|+ .+...
T Consensus 97 ~~v~~~~---~D~~~l~~~~~~~fd~v~D~~~~~~---l~~----------------------------------~~R~~ 136 (218)
T PRK13255 97 GEITIYC---GDFFALTAADLADVDAVYDRAALIA---LPE----------------------------------EMRER 136 (218)
T ss_pred CceEEEE---CcccCCCcccCCCeeEEEehHhHhh---CCH----------------------------------HHHHH
Confidence 0011222 24443321 1146788888777773 232 23344
Q ss_pred HHHHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcC
Q 017747 205 FLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREG 284 (366)
Q Consensus 205 FL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~g 284 (366)
+++.-.+-|+|||++++......... ..-|-|.-+++|+++.+. .
T Consensus 137 ~~~~l~~lL~pgG~~~l~~~~~~~~~---------------------------------~~gPp~~~~~~el~~~~~-~- 181 (218)
T PRK13255 137 YVQQLAALLPAGCRGLLVTLDYPQEE---------------------------------LAGPPFSVSDEEVEALYA-G- 181 (218)
T ss_pred HHHHHHHHcCCCCeEEEEEEEeCCcc---------------------------------CCCCCCCCCHHHHHHHhc-C-
Confidence 55777899999997666554433210 012446889999999885 2
Q ss_pred ceEEeeEEEEe
Q 017747 285 SFKLDQLDMFQ 295 (366)
Q Consensus 285 sf~i~~~e~~~ 295 (366)
.|+|..++...
T Consensus 182 ~~~i~~~~~~~ 192 (218)
T PRK13255 182 CFEIELLERQD 192 (218)
T ss_pred CceEEEeeecc
Confidence 28887777543
|
|
| >TIGR03533 L3_gln_methyl protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00082 Score=64.87 Aligned_cols=128 Identities=19% Similarity=0.223 Sum_probs=66.9
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce-
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV- 129 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~- 129 (366)
+.+|+|+|||+|..++. +.+. .|..+++..|+........-+... .++. ..++
T Consensus 122 ~~~vLDlG~GsG~i~~~--------la~~--------~~~~~v~avDis~~al~~A~~n~~--------~~~~--~~~i~ 175 (284)
T TIGR03533 122 VKRILDLCTGSGCIAIA--------CAYA--------FPEAEVDAVDISPDALAVAEINIE--------RHGL--EDRVT 175 (284)
T ss_pred CCEEEEEeCchhHHHHH--------HHHH--------CCCCEEEEEECCHHHHHHHHHHHH--------HcCC--CCcEE
Confidence 47899999999998875 3222 234789999986432222221111 1111 1122
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHH--HHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYF--KQFQEDFTLFLR 207 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~--~Q~~~D~~~FL~ 207 (366)
|+. +++++. +|++++|+++|+ |+-+....-....+ .+ ...|. .|.. ...-.....|++
T Consensus 176 ~~~---~D~~~~-~~~~~fD~Iv~N---------PPy~~~~~~~~l~~-~~---~~ep~---~al~gg~dGl~~~~~il~ 235 (284)
T TIGR03533 176 LIQ---SDLFAA-LPGRKYDLIVSN---------PPYVDAEDMADLPA-EY---HHEPE---LALASGEDGLDLVRRILA 235 (284)
T ss_pred EEE---Cchhhc-cCCCCccEEEEC---------CCCCCccchhhCCH-hh---hcCHH---HHhcCCCcHHHHHHHHHH
Confidence 333 465544 367789999987 33221100000000 00 00000 0000 011234466888
Q ss_pred HHHHHhccCceEEEEee
Q 017747 208 SRSEELVVGGRMVLILL 224 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~ 224 (366)
.-.+-|+|||++++.+.
T Consensus 236 ~a~~~L~~gG~l~~e~g 252 (284)
T TIGR03533 236 EAADHLNENGVLVVEVG 252 (284)
T ss_pred HHHHhcCCCCEEEEEEC
Confidence 88899999999998763
|
Members of this protein family methylate ribosomal protein L3 on a glutamine side chain. This family is related to HemK, a protein-glutamine methyltranferase for peptide chain release factors. |
| >PF03141 Methyltransf_29: Putative S-adenosyl-L-methionine-dependent methyltransferase; InterPro: IPR004159 Members of this family of hypothetical plant proteins are putative methyltransferases | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00053 Score=70.21 Aligned_cols=48 Identities=31% Similarity=0.471 Sum_probs=34.4
Q ss_pred ccc-CCCCcccEEEccccc-ccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCc
Q 017747 140 GRL-FPNNSLHFIHSSNSL-HWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGG 217 (366)
Q Consensus 140 ~~l-fp~~s~~~~~S~~al-hWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG 217 (366)
.|| ||++++|++|++-|+ .|.+.-- ++.- ++ -|-|+|||
T Consensus 173 ~rLPfp~~~fDmvHcsrc~i~W~~~~g---------------~~l~-----ev-------------------dRvLRpGG 213 (506)
T PF03141_consen 173 QRLPFPSNAFDMVHCSRCLIPWHPNDG---------------FLLF-----EV-------------------DRVLRPGG 213 (506)
T ss_pred ccccCCccchhhhhcccccccchhccc---------------ceee-----hh-------------------hhhhccCc
Confidence 566 999999999999886 5644421 1111 13 78999999
Q ss_pred eEEEEeecC
Q 017747 218 RMVLILLGR 226 (366)
Q Consensus 218 ~lvl~~~g~ 226 (366)
.++++..-.
T Consensus 214 yfv~S~ppv 222 (506)
T PF03141_consen 214 YFVLSGPPV 222 (506)
T ss_pred eEEecCCcc
Confidence 999997643
|
; GO: 0008168 methyltransferase activity |
| >PF07021 MetW: Methionine biosynthesis protein MetW; InterPro: IPR010743 This family consists of several bacterial and one archaeal methionine biosynthesis MetW proteins | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.001 Score=60.39 Aligned_cols=151 Identities=20% Similarity=0.332 Sum_probs=94.1
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceE
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVY 130 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 130 (366)
.-+|+|+|||.|.+-. .|.+. ..++.+.-++-. ..+ ..+..+ |.
T Consensus 14 gsrVLDLGCGdG~LL~--------~L~~~---------k~v~g~GvEid~---~~v-------~~cv~r--Gv------- 57 (193)
T PF07021_consen 14 GSRVLDLGCGDGELLA--------YLKDE---------KQVDGYGVEIDP---DNV-------AACVAR--GV------- 57 (193)
T ss_pred CCEEEecCCCchHHHH--------HHHHh---------cCCeEEEEecCH---HHH-------HHHHHc--CC-------
Confidence 5899999999998543 23332 126666666522 111 122211 11
Q ss_pred EeccCCCccccc--CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 131 IAGYPGSFYGRL--FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 131 ~~~vpgSFy~~l--fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
..+.++-.+-| ||++|+|.++-+-|||=+.+ |..+.
T Consensus 58 -~Viq~Dld~gL~~f~d~sFD~VIlsqtLQ~~~~-P~~vL---------------------------------------- 95 (193)
T PF07021_consen 58 -SVIQGDLDEGLADFPDQSFDYVILSQTLQAVRR-PDEVL---------------------------------------- 95 (193)
T ss_pred -CEEECCHHHhHhhCCCCCccEEehHhHHHhHhH-HHHHH----------------------------------------
Confidence 13445665556 89999999999999999877 54331
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCcccc------CCCHHHHHHHHhh
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFY------APSKEEIEGEVGR 282 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y------~ps~eEv~~~i~~ 282 (366)
.+=|+.|.+.+++|+.-. .|. .--.++-.|..+..+ .+..+|| +-|..++++..++
T Consensus 96 -~EmlRVgr~~IVsFPNFg-----------~W~----~R~~l~~~GrmPvt~--~lPy~WYdTPNih~~Ti~DFe~lc~~ 157 (193)
T PF07021_consen 96 -EEMLRVGRRAIVSFPNFG-----------HWR----NRLQLLLRGRMPVTK--ALPYEWYDTPNIHLCTIKDFEDLCRE 157 (193)
T ss_pred -HHHHHhcCeEEEEecChH-----------HHH----HHHHHHhcCCCCCCC--CCCCcccCCCCcccccHHHHHHHHHH
Confidence 355788999999984221 233 222333356655542 3444444 6799999999999
Q ss_pred cCceEEeeEEEEeecc
Q 017747 283 EGSFKLDQLDMFQVER 298 (366)
Q Consensus 283 ~gsf~i~~~e~~~~~~ 298 (366)
.| ++|.+-..+...+
T Consensus 158 ~~-i~I~~~~~~~~~~ 172 (193)
T PF07021_consen 158 LG-IRIEERVFLDGGR 172 (193)
T ss_pred CC-CEEEEEEEEcCCC
Confidence 98 8886666655443
|
Biosynthesis of methionine from homoserine in Pseudomonas putida takes place in three steps. The first step is the acylation of homoserine to yield an acyl-L-homoserine. This reaction is catalysed by the products of the metXW genes and is equivalent to the first step in enterobacteria, Gram-positive bacteria and fungi, except that in these microorganisms the reaction is catalysed by a single polypeptide (the product of the metA gene in Escherichia coli and the met5 gene product in Neurospora crassa). In P. putida, as in Gram-positive bacteria and certain fungi, the second and third steps are a direct sulphydrylation that converts the O-acyl-L-homoserine into homocysteine and further methylation to yield methionine. The latter reaction can be mediated by either of the two methionine synthetases present in the cells []. |
| >cd02440 AdoMet_MTases S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy) | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.00097 Score=51.39 Aligned_cols=102 Identities=26% Similarity=0.312 Sum_probs=61.0
Q ss_pred EEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceEEe
Q 017747 53 NIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVYIA 132 (366)
Q Consensus 53 ~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~~ 132 (366)
+|+|+|||.|.++..+.. .+..+++..|+..+-....-+.. ...+. ....++.
T Consensus 1 ~ildig~G~G~~~~~~~~-----------------~~~~~~~~~d~~~~~~~~~~~~~--------~~~~~--~~~~~~~ 53 (107)
T cd02440 1 RVLDLGCGTGALALALAS-----------------GPGARVTGVDISPVALELARKAA--------AALLA--DNVEVLK 53 (107)
T ss_pred CeEEEcCCccHHHHHHhc-----------------CCCCEEEEEeCCHHHHHHHHHHH--------hcccc--cceEEEE
Confidence 589999999998764311 12378888898654333222100 00000 1112222
Q ss_pred ccCCCccccc-CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017747 133 GYPGSFYGRL-FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSE 211 (366)
Q Consensus 133 ~vpgSFy~~l-fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~ 211 (366)
+++.+.. .+.+++|+++.+..+++. + .+...+++.-.+
T Consensus 54 ---~~~~~~~~~~~~~~d~i~~~~~~~~~---~-----------------------------------~~~~~~l~~~~~ 92 (107)
T cd02440 54 ---GDAEELPPEADESFDVIISDPPLHHL---V-----------------------------------EDLARFLEEARR 92 (107)
T ss_pred ---cChhhhccccCCceEEEEEccceeeh---h-----------------------------------hHHHHHHHHHHH
Confidence 3443333 367789999999998886 0 133445666677
Q ss_pred HhccCceEEEE
Q 017747 212 ELVVGGRMVLI 222 (366)
Q Consensus 212 EL~~GG~lvl~ 222 (366)
-|+|||.++++
T Consensus 93 ~l~~~g~~~~~ 103 (107)
T cd02440 93 LLKPGGVLVLT 103 (107)
T ss_pred HcCCCCEEEEE
Confidence 88999999986
|
There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.). |
| >PTZ00146 fibrillarin; Provisional | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0026 Score=61.55 Aligned_cols=61 Identities=15% Similarity=0.139 Sum_probs=35.3
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHhhhhcCCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecC
Q 017747 18 YARNSSLQKKASDTVKHITLEALQQLYLEIDPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLND 97 (366)
Q Consensus 18 Y~~nS~~Q~~~~~~~~~~l~~ai~~l~~~~~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nD 97 (366)
|-.=.+.+.+++..++-=|+ .+. ...-.+|||+|||+|..|..+.+.+ + ++-.||..|
T Consensus 107 yR~w~p~rSKlaa~i~~g~~----~l~---IkpG~~VLDLGaG~G~~t~~lAdiV------------G---~~G~VyAVD 164 (293)
T PTZ00146 107 YRVWNPFRSKLAAAIIGGVA----NIP---IKPGSKVLYLGAASGTTVSHVSDLV------------G---PEGVVYAVE 164 (293)
T ss_pred eeeeCCcccHHHHHHHCCcc----eec---cCCCCEEEEeCCcCCHHHHHHHHHh------------C---CCCEEEEEE
Confidence 55555566555544322122 111 1234799999999999887543322 1 235788888
Q ss_pred CCC
Q 017747 98 LPT 100 (366)
Q Consensus 98 Lp~ 100 (366)
+..
T Consensus 165 ~s~ 167 (293)
T PTZ00146 165 FSH 167 (293)
T ss_pred CcH
Confidence 654
|
|
| >PF05148 Methyltransf_8: Hypothetical methyltransferase; InterPro: IPR007823 This family consists of uncharacterised eukaryotic proteins which are related to S-adenosyl-L-methionine-dependent methyltransferases | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.00056 Score=62.91 Aligned_cols=87 Identities=24% Similarity=0.315 Sum_probs=48.9
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
++..+|||+|||.+..+.. +. ....|.--||-.. .+.
T Consensus 71 ~~~~viaD~GCGdA~la~~--------~~-----------~~~~V~SfDLva~------------------------n~~ 107 (219)
T PF05148_consen 71 PKSLVIADFGCGDAKLAKA--------VP-----------NKHKVHSFDLVAP------------------------NPR 107 (219)
T ss_dssp -TTS-EEEES-TT-HHHHH---------------------S---EEEEESS-S------------------------STT
T ss_pred CCCEEEEECCCchHHHHHh--------cc-----------cCceEEEeeccCC------------------------CCC
Confidence 5568999999999997732 21 1267777788532 112
Q ss_pred eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
+-++ +--.-.++++|+|+++-+.+|.= .||..||.-
T Consensus 108 Vtac----dia~vPL~~~svDv~VfcLSLMG----------------------------------------Tn~~~fi~E 143 (219)
T PF05148_consen 108 VTAC----DIANVPLEDESVDVAVFCLSLMG----------------------------------------TNWPDFIRE 143 (219)
T ss_dssp EEES-----TTS-S--TT-EEEEEEES---S----------------------------------------S-HHHHHHH
T ss_pred EEEe----cCccCcCCCCceeEEEEEhhhhC----------------------------------------CCcHHHHHH
Confidence 2222 22234479999999998887642 267778888
Q ss_pred HHHHhccCceEEEE
Q 017747 209 RSEELVVGGRMVLI 222 (366)
Q Consensus 209 Ra~EL~~GG~lvl~ 222 (366)
=.|-|||||.|.+.
T Consensus 144 A~RvLK~~G~L~IA 157 (219)
T PF05148_consen 144 ANRVLKPGGILKIA 157 (219)
T ss_dssp HHHHEEEEEEEEEE
T ss_pred HHheeccCcEEEEE
Confidence 89999999999987
|
; GO: 0008168 methyltransferase activity; PDB: 2ZFU_B. |
| >PRK04266 fibrillarin; Provisional | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0015 Score=61.02 Aligned_cols=35 Identities=17% Similarity=0.189 Sum_probs=25.0
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCC
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTN 101 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~N 101 (366)
..+|+|+|||+|..|..+.+.+ +.-.|+.-|+...
T Consensus 73 g~~VlD~G~G~G~~~~~la~~v----------------~~g~V~avD~~~~ 107 (226)
T PRK04266 73 GSKVLYLGAASGTTVSHVSDIV----------------EEGVVYAVEFAPR 107 (226)
T ss_pred CCEEEEEccCCCHHHHHHHHhc----------------CCCeEEEEECCHH
Confidence 4799999999999987532211 1257888898754
|
|
| >COG4123 Predicted O-methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.00065 Score=64.22 Aligned_cols=125 Identities=15% Similarity=0.216 Sum_probs=78.1
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+..-+|+|+|||+|..++++ .++ .+..++...++-.-......+++.- +++ ..+
T Consensus 43 ~~~~~IlDlGaG~G~l~L~l--------a~r--------~~~a~I~~VEiq~~~a~~A~~nv~l--------n~l--~~r 96 (248)
T COG4123 43 PKKGRILDLGAGNGALGLLL--------AQR--------TEKAKIVGVEIQEEAAEMAQRNVAL--------NPL--EER 96 (248)
T ss_pred ccCCeEEEecCCcCHHHHHH--------hcc--------CCCCcEEEEEeCHHHHHHHHHHHHh--------Ccc--hhc
Confidence 34789999999999999863 222 1226666666654444444443321 111 112
Q ss_pred e-EEeccCCCc--ccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSF--YGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLF 205 (366)
Q Consensus 129 ~-f~~~vpgSF--y~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~F 205 (366)
+ ++. .++ +.+..+..++|+++|+ |+.... ... ..+.+..+-.+-+..-++..+
T Consensus 97 i~v~~---~Di~~~~~~~~~~~fD~Ii~N---------PPyf~~---------~~~---~~~~~~~~~Ar~e~~~~le~~ 152 (248)
T COG4123 97 IQVIE---ADIKEFLKALVFASFDLIICN---------PPYFKQ---------GSR---LNENPLRAIARHEITLDLEDL 152 (248)
T ss_pred eeEeh---hhHHHhhhcccccccCEEEeC---------CCCCCC---------ccc---cCcChhhhhhhhhhcCCHHHH
Confidence 2 222 233 2334455589999986 665433 111 123346666777788899999
Q ss_pred HHHHHHHhccCceEEEEe
Q 017747 206 LRSRSEELVVGGRMVLIL 223 (366)
Q Consensus 206 L~~Ra~EL~~GG~lvl~~ 223 (366)
++.-++-|||||++.+..
T Consensus 153 i~~a~~~lk~~G~l~~V~ 170 (248)
T COG4123 153 IRAAAKLLKPGGRLAFVH 170 (248)
T ss_pred HHHHHHHccCCCEEEEEe
Confidence 999999999999999886
|
|
| >KOG3045 consensus Predicted RNA methylase involved in rRNA processing [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0019 Score=61.12 Aligned_cols=88 Identities=20% Similarity=0.248 Sum_probs=61.2
Q ss_pred CCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCC
Q 017747 48 DPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSP 127 (366)
Q Consensus 48 ~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~ 127 (366)
.+..+.|+|+|||.+..+.. .+ -+|+--||-.- ..
T Consensus 178 r~~~~vIaD~GCGEakiA~~--------------------~~-~kV~SfDL~a~------------------------~~ 212 (325)
T KOG3045|consen 178 RPKNIVIADFGCGEAKIASS--------------------ER-HKVHSFDLVAV------------------------NE 212 (325)
T ss_pred CcCceEEEecccchhhhhhc--------------------cc-cceeeeeeecC------------------------CC
Confidence 36789999999999987630 11 45566676421 11
Q ss_pred ceEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 128 SVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 128 ~~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
.+-+| +.-+-.++++|+|+++.+.+|+= .||..|++
T Consensus 213 ~V~~c----Dm~~vPl~d~svDvaV~CLSLMg----------------------------------------tn~~df~k 248 (325)
T KOG3045|consen 213 RVIAC----DMRNVPLEDESVDVAVFCLSLMG----------------------------------------TNLADFIK 248 (325)
T ss_pred ceeec----cccCCcCccCcccEEEeeHhhhc----------------------------------------ccHHHHHH
Confidence 33333 33344589999999987776642 36777888
Q ss_pred HHHHHhccCceEEEEee
Q 017747 208 SRSEELVVGGRMVLILL 224 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~ 224 (366)
--.+-|+|||.+.+.=+
T Consensus 249 Ea~RiLk~gG~l~IAEv 265 (325)
T KOG3045|consen 249 EANRILKPGGLLYIAEV 265 (325)
T ss_pred HHHHHhccCceEEEEeh
Confidence 88999999999998843
|
|
| >COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.00059 Score=63.89 Aligned_cols=152 Identities=14% Similarity=0.154 Sum_probs=86.2
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce-
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV- 129 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~- 129 (366)
-.+|+|+|||-|..|.. +.+. | ..|+..|+..- ..+ +.+.+...+.-.+
T Consensus 60 g~~vLDvGCGgG~Lse~--------mAr~-----G-----a~VtgiD~se~-----------~I~-~Ak~ha~e~gv~i~ 109 (243)
T COG2227 60 GLRVLDVGCGGGILSEP--------LARL-----G-----ASVTGIDASEK-----------PIE-VAKLHALESGVNID 109 (243)
T ss_pred CCeEEEecCCccHhhHH--------HHHC-----C-----CeeEEecCChH-----------HHH-HHHHhhhhcccccc
Confidence 48999999999977753 3331 2 89999998641 111 1111000000010
Q ss_pred EEeccCCCccccc-CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRL-FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 130 f~~~vpgSFy~~l-fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
|..+ .- +.| ...+++|++.|.-.++-+.+ | ..|++.
T Consensus 110 y~~~---~~-edl~~~~~~FDvV~cmEVlEHv~d-p--------------------------------------~~~~~~ 146 (243)
T COG2227 110 YRQA---TV-EDLASAGGQFDVVTCMEVLEHVPD-P--------------------------------------ESFLRA 146 (243)
T ss_pred chhh---hH-HHHHhcCCCccEEEEhhHHHccCC-H--------------------------------------HHHHHH
Confidence 2221 11 344 44489999998766665433 1 237889
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHH--HHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCce
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFW--ELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSF 286 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~--~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf 286 (366)
+++=+||||.|+++.+-|.-- .++. -..+-.++ ++-.|.-+-+ -|-.++|+...+...| |
T Consensus 147 c~~lvkP~G~lf~STinrt~k-------a~~~~i~~ae~vl~-~vP~gTH~~~---------k~irp~El~~~~~~~~-~ 208 (243)
T COG2227 147 CAKLVKPGGILFLSTINRTLK-------AYLLAIIGAEYVLR-IVPKGTHDYR---------KFIKPAELIRWLLGAN-L 208 (243)
T ss_pred HHHHcCCCcEEEEeccccCHH-------HHHHHHHHHHHHHH-hcCCcchhHH---------HhcCHHHHHHhcccCC-c
Confidence 999999999999999876431 1211 11223333 4444421111 1456788888888776 6
Q ss_pred EEeeEEE
Q 017747 287 KLDQLDM 293 (366)
Q Consensus 287 ~i~~~e~ 293 (366)
++.+..-
T Consensus 209 ~~~~~~g 215 (243)
T COG2227 209 KIIDRKG 215 (243)
T ss_pred eEEeecc
Confidence 6655543
|
|
| >PRK14903 16S rRNA methyltransferase B; Provisional | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0015 Score=66.83 Aligned_cols=129 Identities=16% Similarity=0.092 Sum_probs=76.0
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce-
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV- 129 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~- 129 (366)
..+|+|+|||+|.-|..+. +.. .+..+|+.+|+..+....+-+.+. . .| ..++
T Consensus 238 g~~VLD~cagpGgkt~~la--------~~~-------~~~g~V~a~Dis~~rl~~~~~n~~-------r-~g---~~~v~ 291 (431)
T PRK14903 238 GLRVLDTCAAPGGKTTAIA--------ELM-------KDQGKILAVDISREKIQLVEKHAK-------R-LK---LSSIE 291 (431)
T ss_pred CCEEEEeCCCccHHHHHHH--------HHc-------CCCCEEEEEECCHHHHHHHHHHHH-------H-cC---CCeEE
Confidence 4689999999999998532 221 123789999997654333322221 1 11 1222
Q ss_pred EEeccCCCccccc-CCCCcccEEEc---ccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRL-FPNNSLHFIHS---SNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLF 205 (366)
Q Consensus 130 f~~~vpgSFy~~l-fp~~s~~~~~S---~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~F 205 (366)
+..+ +...-. +.++++|.++. ++.+..+.+.|..... .+ +.-..+..+.-..+
T Consensus 292 ~~~~---Da~~l~~~~~~~fD~Vl~DaPCsg~G~~~~~p~~~~~---------------~~-----~~~~~~l~~~Q~~i 348 (431)
T PRK14903 292 IKIA---DAERLTEYVQDTFDRILVDAPCTSLGTARNHPEVLRR---------------VN-----KEDFKKLSEIQLRI 348 (431)
T ss_pred EEEC---chhhhhhhhhccCCEEEECCCCCCCccccCChHHHHh---------------CC-----HHHHHHHHHHHHHH
Confidence 3332 321111 23568999985 3455666655543211 01 11224455666788
Q ss_pred HHHHHHHhccCceEEEEeecCCC
Q 017747 206 LRSRSEELVVGGRMVLILLGRIG 228 (366)
Q Consensus 206 L~~Ra~EL~~GG~lvl~~~g~~~ 228 (366)
|..-++-|+|||+|+.++.....
T Consensus 349 L~~a~~~LkpGG~LvYsTCs~~~ 371 (431)
T PRK14903 349 VSQAWKLLEKGGILLYSTCTVTK 371 (431)
T ss_pred HHHHHHhcCCCCEEEEEECCCCh
Confidence 99999999999999999876543
|
|
| >PRK11805 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0019 Score=63.11 Aligned_cols=73 Identities=19% Similarity=0.272 Sum_probs=42.9
Q ss_pred eEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce-E
Q 017747 52 INIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV-Y 130 (366)
Q Consensus 52 ~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~-f 130 (366)
.+|+|+|||+|..++.+ .+. .|..+++..|+...-....-+.+. ..+. ..++ |
T Consensus 135 ~~VLDlG~GsG~iai~l--------a~~--------~p~~~V~avDis~~al~~A~~n~~--------~~~l--~~~i~~ 188 (307)
T PRK11805 135 TRILDLCTGSGCIAIAC--------AYA--------FPDAEVDAVDISPDALAVAEINIE--------RHGL--EDRVTL 188 (307)
T ss_pred CEEEEEechhhHHHHHH--------HHH--------CCCCEEEEEeCCHHHHHHHHHHHH--------HhCC--CCcEEE
Confidence 68999999999988752 222 244889999986532222221111 1111 1122 3
Q ss_pred EeccCCCcccccCCCCcccEEEcc
Q 017747 131 IAGYPGSFYGRLFPNNSLHFIHSS 154 (366)
Q Consensus 131 ~~~vpgSFy~~lfp~~s~~~~~S~ 154 (366)
+. +++.+. +|++++|+++|+
T Consensus 189 ~~---~D~~~~-l~~~~fDlIvsN 208 (307)
T PRK11805 189 IE---SDLFAA-LPGRRYDLIVSN 208 (307)
T ss_pred EE---Cchhhh-CCCCCccEEEEC
Confidence 33 466554 366789999996
|
|
| >PRK14904 16S rRNA methyltransferase B; Provisional | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0031 Score=64.69 Aligned_cols=126 Identities=12% Similarity=0.053 Sum_probs=72.0
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc-e
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS-V 129 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~-~ 129 (366)
..+|+|+|||+|..|..+...+ ....+|+..|+.......+-+.+.. .| ..+ .
T Consensus 251 g~~VLDlgaG~G~kt~~la~~~---------------~~~~~V~avD~s~~~l~~~~~~~~~--------~g---~~~v~ 304 (445)
T PRK14904 251 GSTVLDLCAAPGGKSTFMAELM---------------QNRGQITAVDRYPQKLEKIRSHASA--------LG---ITIIE 304 (445)
T ss_pred CCEEEEECCCCCHHHHHHHHHh---------------CCCcEEEEEECCHHHHHHHHHHHHH--------hC---CCeEE
Confidence 4789999999999997532221 1125899999977554444332221 11 122 2
Q ss_pred EEeccCCCcccccCCCCcccEEEc----ccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHS----SNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLF 205 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S----~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~F 205 (366)
++. ++. ..+.|++++|.++. +.+-+|-. -|..... .++..+ .+..+.-..+
T Consensus 305 ~~~---~Da-~~~~~~~~fD~Vl~D~Pcsg~g~~~r-~p~~~~~---------------~~~~~~-----~~l~~~q~~i 359 (445)
T PRK14904 305 TIE---GDA-RSFSPEEQPDAILLDAPCTGTGVLGR-RAELRWK---------------LTPEKL-----AELVGLQAEL 359 (445)
T ss_pred EEe---Ccc-cccccCCCCCEEEEcCCCCCcchhhc-Ccchhhc---------------CCHHHH-----HHHHHHHHHH
Confidence 333 333 23346778999983 22223322 2322110 011111 2334556678
Q ss_pred HHHHHHHhccCceEEEEeecCC
Q 017747 206 LRSRSEELVVGGRMVLILLGRI 227 (366)
Q Consensus 206 L~~Ra~EL~~GG~lvl~~~g~~ 227 (366)
|..-++-|+|||+|+.+++.-.
T Consensus 360 L~~a~~~lkpgG~lvystcs~~ 381 (445)
T PRK14904 360 LDHAASLLKPGGVLVYATCSIE 381 (445)
T ss_pred HHHHHHhcCCCcEEEEEeCCCC
Confidence 9999999999999999886654
|
|
| >TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0037 Score=63.67 Aligned_cols=129 Identities=16% Similarity=0.168 Sum_probs=74.1
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceE
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVY 130 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 130 (366)
..+|+|+|||+|.-|..+...+ + ..+++..|...+....+-+.+. . .| .. +-
T Consensus 239 g~~VLDlcag~G~kt~~la~~~---------------~-~~~v~a~D~~~~~l~~~~~n~~-------r-~g---~~-~~ 290 (426)
T TIGR00563 239 EETILDACAAPGGKTTHILELA---------------P-QAQVVALDIHEHRLKRVYENLK-------R-LG---LT-IK 290 (426)
T ss_pred CCeEEEeCCCccHHHHHHHHHc---------------C-CCeEEEEeCCHHHHHHHHHHHH-------H-cC---CC-eE
Confidence 4799999999999998532211 1 3689999997654444433222 1 11 11 22
Q ss_pred EeccCCCccccc--CCCCcccEEEc---ccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 017747 131 IAGYPGSFYGRL--FPNNSLHFIHS---SNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLF 205 (366)
Q Consensus 131 ~~~vpgSFy~~l--fp~~s~~~~~S---~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~F 205 (366)
+..+.++..+-. .+.+++|.++. ++++.-+.+.|+.... .++..+ .+..+.-..+
T Consensus 291 v~~~~~d~~~~~~~~~~~~fD~VllDaPcSg~G~~~~~p~~~~~---------------~~~~~~-----~~l~~lQ~~l 350 (426)
T TIGR00563 291 AETKDGDGRGPSQWAENEQFDRILLDAPCSATGVIRRHPDIKWL---------------RKPRDI-----AELAELQSEI 350 (426)
T ss_pred EEEeccccccccccccccccCEEEEcCCCCCCcccccCcchhhc---------------CCHHHH-----HHHHHHHHHH
Confidence 222223332222 25678999985 3444445555543211 011112 2334455677
Q ss_pred HHHHHHHhccCceEEEEeecCC
Q 017747 206 LRSRSEELVVGGRMVLILLGRI 227 (366)
Q Consensus 206 L~~Ra~EL~~GG~lvl~~~g~~ 227 (366)
|..=++-|+|||+||.+++.-.
T Consensus 351 L~~a~~~LkpgG~lvystcs~~ 372 (426)
T TIGR00563 351 LDAIWPLLKTGGTLVYATCSVL 372 (426)
T ss_pred HHHHHHhcCCCcEEEEEeCCCC
Confidence 8888889999999999986654
|
The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles. |
| >PRK10901 16S rRNA methyltransferase B; Provisional | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0028 Score=64.59 Aligned_cols=126 Identities=13% Similarity=0.129 Sum_probs=69.1
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceE
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVY 130 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 130 (366)
..+|+|+|||+|.-|+.+.+.. +...|+..|+.......+-+.+. . .| ....+
T Consensus 245 g~~VLDlgaG~G~~t~~la~~~----------------~~~~v~a~D~s~~~l~~~~~n~~-------~-~g---~~~~~ 297 (427)
T PRK10901 245 GERVLDACAAPGGKTAHILELA----------------PQAQVVALDIDAQRLERVRENLQ-------R-LG---LKATV 297 (427)
T ss_pred CCEEEEeCCCCChHHHHHHHHc----------------CCCEEEEEeCCHHHHHHHHHHHH-------H-cC---CCeEE
Confidence 4789999999999987532211 12678999986643333322221 1 11 11223
Q ss_pred EeccCCCccc--ccCCCCcccEEEcc---cccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 017747 131 IAGYPGSFYG--RLFPNNSLHFIHSS---NSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLF 205 (366)
Q Consensus 131 ~~~vpgSFy~--~lfp~~s~~~~~S~---~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~F 205 (366)
+. ++..+ ..++++++|.+++. +...-+.+-|..... ..++ -...+.+....+
T Consensus 298 ~~---~D~~~~~~~~~~~~fD~Vl~D~Pcs~~G~~~~~p~~~~~----------------~~~~----~l~~l~~~q~~i 354 (427)
T PRK10901 298 IV---GDARDPAQWWDGQPFDRILLDAPCSATGVIRRHPDIKWL----------------RRPE----DIAALAALQSEI 354 (427)
T ss_pred EE---cCcccchhhcccCCCCEEEECCCCCcccccccCcccccc----------------CCHH----HHHHHHHHHHHH
Confidence 33 33322 22456789999842 122112222332110 0011 112344556778
Q ss_pred HHHHHHHhccCceEEEEeecC
Q 017747 206 LRSRSEELVVGGRMVLILLGR 226 (366)
Q Consensus 206 L~~Ra~EL~~GG~lvl~~~g~ 226 (366)
|..-.+-|+|||+|+.++..-
T Consensus 355 L~~a~~~LkpGG~lvystcs~ 375 (427)
T PRK10901 355 LDALWPLLKPGGTLLYATCSI 375 (427)
T ss_pred HHHHHHhcCCCCEEEEEeCCC
Confidence 888889999999999887533
|
|
| >PRK00811 spermidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0027 Score=61.22 Aligned_cols=116 Identities=16% Similarity=0.176 Sum_probs=65.5
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+++.+|+|+|||+|..+..+ + ++ ++.-+|...|+-..--...-+.++.+..... . .++
T Consensus 75 ~~p~~VL~iG~G~G~~~~~~-------l-~~--------~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~-----~-d~r 132 (283)
T PRK00811 75 PNPKRVLIIGGGDGGTLREV-------L-KH--------PSVEKITLVEIDERVVEVCRKYLPEIAGGAY-----D-DPR 132 (283)
T ss_pred CCCCEEEEEecCchHHHHHH-------H-cC--------CCCCEEEEEeCCHHHHHHHHHHhHHhccccc-----c-CCc
Confidence 56789999999999987542 1 11 1225788888865433333222221111000 0 223
Q ss_pred e-EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 129 ~-f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
+ ++.+-+..|-.. +++++|++++..+-+|. |. .+.|. ..|++
T Consensus 133 v~v~~~Da~~~l~~--~~~~yDvIi~D~~dp~~---~~-------------------------~~l~t-------~ef~~ 175 (283)
T PRK00811 133 VELVIGDGIKFVAE--TENSFDVIIVDSTDPVG---PA-------------------------EGLFT-------KEFYE 175 (283)
T ss_pred eEEEECchHHHHhh--CCCcccEEEECCCCCCC---ch-------------------------hhhhH-------HHHHH
Confidence 3 444443344333 57789999987654441 10 01121 36677
Q ss_pred HHHHHhccCceEEEEe
Q 017747 208 SRSEELVVGGRMVLIL 223 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~ 223 (366)
...+-|+|||.|++..
T Consensus 176 ~~~~~L~~gGvlv~~~ 191 (283)
T PRK00811 176 NCKRALKEDGIFVAQS 191 (283)
T ss_pred HHHHhcCCCcEEEEeC
Confidence 7889999999998753
|
|
| >PHA03411 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0034 Score=60.27 Aligned_cols=116 Identities=12% Similarity=0.082 Sum_probs=68.1
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceE
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVY 130 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 130 (366)
..+|+|+|||+|..++.+ .++ .+..+|+..|+........-+.++ ..-+
T Consensus 65 ~grVLDLGcGsGilsl~l--------a~r--------~~~~~V~gVDisp~al~~Ar~n~~---------------~v~~ 113 (279)
T PHA03411 65 TGKVLDLCAGIGRLSFCM--------LHR--------CKPEKIVCVELNPEFARIGKRLLP---------------EAEW 113 (279)
T ss_pred CCeEEEcCCCCCHHHHHH--------HHh--------CCCCEEEEEECCHHHHHHHHHhCc---------------CCEE
Confidence 368999999999877642 221 122789999986532221111111 1122
Q ss_pred EeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHH----HHH--HHHH
Q 017747 131 IAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQ----FQE--DFTL 204 (366)
Q Consensus 131 ~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q----~~~--D~~~ 204 (366)
+. +++.+ +.+..++|+++|+-.++++.... .. +.|+-+ ..+ .+..
T Consensus 114 v~---~D~~e-~~~~~kFDlIIsNPPF~~l~~~d--~~-----------------------~~~~~~GG~~g~~~l~~~~ 164 (279)
T PHA03411 114 IT---SDVFE-FESNEKFDVVISNPPFGKINTTD--TK-----------------------DVFEYTGGEFEFKVMTLGQ 164 (279)
T ss_pred EE---Cchhh-hcccCCCcEEEEcCCccccCchh--hh-----------------------hhhhhccCccccccccHHH
Confidence 33 45543 33467899999999998854211 10 111110 001 2578
Q ss_pred HHHHHHHHhccCceEEEEeecC
Q 017747 205 FLRSRSEELVVGGRMVLILLGR 226 (366)
Q Consensus 205 FL~~Ra~EL~~GG~lvl~~~g~ 226 (366)
||+..+.-|+|+|...+..-|+
T Consensus 165 ~l~~v~~~L~p~G~~~~~yss~ 186 (279)
T PHA03411 165 KFADVGYFIVPTGSAGFAYSGR 186 (279)
T ss_pred HHhhhHheecCCceEEEEEecc
Confidence 8999999999999888775444
|
|
| >TIGR00536 hemK_fam HemK family putative methylases | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0049 Score=59.36 Aligned_cols=130 Identities=14% Similarity=0.131 Sum_probs=65.1
Q ss_pred eEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceEE
Q 017747 52 INIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVYI 131 (366)
Q Consensus 52 ~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~ 131 (366)
.+|+|+|||+|..++.+ ... .|..+++..|+...-....-+.+ . ..+.. ..-.|+
T Consensus 116 ~~vLDlG~GsG~i~l~l--------a~~--------~~~~~v~avDis~~al~~a~~n~-------~-~~~~~-~~v~~~ 170 (284)
T TIGR00536 116 LHILDLGTGSGCIALAL--------AYE--------FPNAEVIAVDISPDALAVAEENA-------E-KNQLE-HRVEFI 170 (284)
T ss_pred CEEEEEeccHhHHHHHH--------HHH--------CCCCEEEEEECCHHHHHHHHHHH-------H-HcCCC-CcEEEE
Confidence 68999999999887742 221 23478999998643222211111 1 11110 011233
Q ss_pred eccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017747 132 AGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSE 211 (366)
Q Consensus 132 ~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~ 211 (366)
. +++++. ++++++|+++|+--..--+..+. . + .+.- -.|..+.-. -.-.-.+...|+..-.+
T Consensus 171 ~---~d~~~~-~~~~~fDlIvsNPPyi~~~~~~~---------~-~-~~~~--~eP~~AL~g-g~dgl~~~~~ii~~a~~ 232 (284)
T TIGR00536 171 Q---SNLFEP-LAGQKIDIIVSNPPYIDEEDLAD---------L-P-NVVR--FEPLLALVG-GDDGLNILRQIIELAPD 232 (284)
T ss_pred E---Cchhcc-CcCCCccEEEECCCCCCcchhhc---------C-C-cccc--cCcHHHhcC-CCcHHHHHHHHHHHHHH
Confidence 3 466554 45568999998622111110000 0 0 0000 000000000 00012466778888889
Q ss_pred HhccCceEEEEee
Q 017747 212 ELVVGGRMVLILL 224 (366)
Q Consensus 212 EL~~GG~lvl~~~ 224 (366)
-|+|||.+++...
T Consensus 233 ~L~~gG~l~~e~g 245 (284)
T TIGR00536 233 YLKPNGFLVCEIG 245 (284)
T ss_pred hccCCCEEEEEEC
Confidence 9999999998873
|
The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. Both E. coli and H. influenzae have two members rather than one. The members from the Mycoplasmas have an additional C-terminal domain. |
| >PRK14902 16S rRNA methyltransferase B; Provisional | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.0058 Score=62.60 Aligned_cols=127 Identities=17% Similarity=0.126 Sum_probs=67.6
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceE
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVY 130 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 130 (366)
..+|+|+|||+|..|+.+.... .+.-+++..|+..+.-..+-+.+. . .| ..++
T Consensus 251 g~~VLDlgaG~G~~t~~la~~~---------------~~~~~v~avDi~~~~l~~~~~n~~-------~-~g---~~~v- 303 (444)
T PRK14902 251 GDTVLDACAAPGGKTTHIAELL---------------KNTGKVVALDIHEHKLKLIEENAK-------R-LG---LTNI- 303 (444)
T ss_pred CCEEEEeCCCCCHHHHHHHHHh---------------CCCCEEEEEeCCHHHHHHHHHHHH-------H-cC---CCeE-
Confidence 4689999999999998532221 123689999996543333322211 1 11 1222
Q ss_pred EeccCCCcccc--cCCCCcccEEEcc---cccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 017747 131 IAGYPGSFYGR--LFPNNSLHFIHSS---NSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLF 205 (366)
Q Consensus 131 ~~~vpgSFy~~--lfp~~s~~~~~S~---~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~F 205 (366)
..+-+++.+- .++ +++|++++. +....+++.|..... + ++..+ ....+--..+
T Consensus 304 -~~~~~D~~~~~~~~~-~~fD~Vl~D~Pcsg~G~~~~~p~~~~~-------~--------~~~~~-----~~l~~~q~~i 361 (444)
T PRK14902 304 -ETKALDARKVHEKFA-EKFDKILVDAPCSGLGVIRRKPDIKYN-------K--------TKEDI-----ESLQEIQLEI 361 (444)
T ss_pred -EEEeCCcccccchhc-ccCCEEEEcCCCCCCeeeccCcchhhc-------C--------CHHHH-----HHHHHHHHHH
Confidence 1222344321 133 789999864 223333333332111 0 11111 1223334567
Q ss_pred HHHHHHHhccCceEEEEeecC
Q 017747 206 LRSRSEELVVGGRMVLILLGR 226 (366)
Q Consensus 206 L~~Ra~EL~~GG~lvl~~~g~ 226 (366)
|..-.+-|+|||+||.++..-
T Consensus 362 L~~a~~~LkpGG~lvystcs~ 382 (444)
T PRK14902 362 LESVAQYLKKGGILVYSTCTI 382 (444)
T ss_pred HHHHHHHcCCCCEEEEEcCCC
Confidence 888889999999999776433
|
|
| >KOG3178 consensus Hydroxyindole-O-methyltransferase and related SAM-dependent methyltransferases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.024 Score=55.85 Aligned_cols=186 Identities=19% Similarity=0.215 Sum_probs=103.4
Q ss_pred cCCCCCcchHHHhhHHHHHHHHHHHHHHHHHHHHhhhhcCCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCC
Q 017747 9 MAGGTGPTSYARNSSLQKKASDTVKHITLEALQQLYLEIDPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPA 88 (366)
Q Consensus 9 M~gg~g~~sY~~nS~~Q~~~~~~~~~~l~~ai~~l~~~~~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~ 88 (366)
|.||-+..+|.-+-.+|+.....-....++. .+.+.. ....-..+|.|-|.|..+-.+++ + .
T Consensus 138 ~l~~~~~~~~~~~~~~~~sm~~l~~~~~~~i-l~~~~G-f~~v~~avDvGgGiG~v~k~ll~--------~--------f 199 (342)
T KOG3178|consen 138 MLGGYGGADERFSKDFNGSMSFLSTLVMKKI-LEVYTG-FKGVNVAVDVGGGIGRVLKNLLS--------K--------Y 199 (342)
T ss_pred hhhhhcccccccHHHHHHHHHHHHHHHHHhh-hhhhcc-cccCceEEEcCCcHhHHHHHHHH--------h--------C
Confidence 4566566555444445444332222222222 222211 23456789999999998865322 2 4
Q ss_pred CcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceEEeccCCCcccccCCCCcccEEEcccccccccCCCCccc
Q 017747 89 PEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLY 168 (366)
Q Consensus 89 p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~ 168 (366)
|.+..+-=|+|.= -+.-+ ..+ +. +.-+.|+++.. .|++- ++|--+.||=+ +
T Consensus 200 p~ik~infdlp~v-----~~~a~--------~~~----~g--V~~v~gdmfq~-~P~~d--aI~mkWiLhdw-------t 250 (342)
T KOG3178|consen 200 PHIKGINFDLPFV-----LAAAP--------YLA----PG--VEHVAGDMFQD-TPKGD--AIWMKWILHDW-------T 250 (342)
T ss_pred CCCceeecCHHHH-----Hhhhh--------hhc----CC--cceeccccccc-CCCcC--eEEEEeecccC-------C
Confidence 5588877777631 11000 000 01 33466888888 78776 66655555432 2
Q ss_pred ccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEEEeecCCCCCCC---CCCchhHHHHHHH
Q 017747 169 NEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHV---DRGNSFFWELLSR 245 (366)
Q Consensus 169 ~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~lvl~~~g~~~~~~~---~~~~~~~~~~l~~ 245 (366)
| +|...||+++++-|+|||.+++.=.-.+.+... ........+.+..
T Consensus 251 D------------------------------edcvkiLknC~~sL~~~GkIiv~E~V~p~e~~~dd~~s~v~~~~d~lm~ 300 (342)
T KOG3178|consen 251 D------------------------------EDCVKILKNCKKSLPPGGKIIVVENVTPEEDKFDDIDSSVTRDMDLLML 300 (342)
T ss_pred h------------------------------HHHHHHHHHHHHhCCCCCEEEEEeccCCCCCCccccccceeehhHHHHH
Confidence 2 689999999999999999999874422221111 0111112333333
Q ss_pred HHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEe
Q 017747 246 SLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLD 289 (366)
Q Consensus 246 al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~ 289 (366)
+..+ -| --++.+|++..+.++| |.+-
T Consensus 301 ~~~~---~G--------------kert~~e~q~l~~~~g-F~~~ 326 (342)
T KOG3178|consen 301 TQTS---GG--------------KERTLKEFQALLPEEG-FPVC 326 (342)
T ss_pred HHhc---cc--------------eeccHHHHHhcchhhc-Ccee
Confidence 3221 13 3478999999999998 7663
|
|
| >TIGR00406 prmA ribosomal protein L11 methyltransferase | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0015 Score=63.20 Aligned_cols=34 Identities=24% Similarity=0.264 Sum_probs=24.0
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCC
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTN 101 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~N 101 (366)
..+|+|+|||+|..++. +.+. | . -+|+..|+...
T Consensus 160 g~~VLDvGcGsG~lai~--------aa~~-----g---~-~~V~avDid~~ 193 (288)
T TIGR00406 160 DKNVIDVGCGSGILSIA--------ALKL-----G---A-AKVVGIDIDPL 193 (288)
T ss_pred CCEEEEeCCChhHHHHH--------HHHc-----C---C-CeEEEEECCHH
Confidence 47999999999998764 2121 2 1 47889998654
|
Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis. |
| >PRK14968 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.0057 Score=54.17 Aligned_cols=124 Identities=13% Similarity=0.100 Sum_probs=65.3
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCC-ce
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSP-SV 129 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~-~~ 129 (366)
..+|+|+|||+|..++.+ .++ ..+++..|...+....+-+.+. . .+.+ .. ..
T Consensus 24 ~~~vLd~G~G~G~~~~~l--------~~~----------~~~v~~~D~s~~~~~~a~~~~~-------~-~~~~-~~~~~ 76 (188)
T PRK14968 24 GDRVLEVGTGSGIVAIVA--------AKN----------GKKVVGVDINPYAVECAKCNAK-------L-NNIR-NNGVE 76 (188)
T ss_pred CCEEEEEccccCHHHHHH--------Hhh----------cceEEEEECCHHHHHHHHHHHH-------H-cCCC-CcceE
Confidence 468999999999987642 111 1678888886543333322211 1 1111 11 12
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
++ .+++.+. ++++++|+++++..+.+-. |..... ..++. .+..... .......|++.-
T Consensus 77 ~~---~~d~~~~-~~~~~~d~vi~n~p~~~~~--~~~~~~---~~~~~--~~~~~~~-----------~~~~~~~~i~~~ 134 (188)
T PRK14968 77 VI---RSDLFEP-FRGDKFDVILFNPPYLPTE--EEEEWD---DWLNY--ALSGGKD-----------GREVIDRFLDEV 134 (188)
T ss_pred EE---ecccccc-ccccCceEEEECCCcCCCC--chhhhh---hhhhh--hhccCcC-----------hHHHHHHHHHHH
Confidence 22 2455554 4566899999875543311 111000 00000 0000000 123456788899
Q ss_pred HHHhccCceEEEEe
Q 017747 210 SEELVVGGRMVLIL 223 (366)
Q Consensus 210 a~EL~~GG~lvl~~ 223 (366)
.+-|+|||.+++..
T Consensus 135 ~~~Lk~gG~~~~~~ 148 (188)
T PRK14968 135 GRYLKPGGRILLLQ 148 (188)
T ss_pred HHhcCCCeEEEEEE
Confidence 99999999998875
|
|
| >PF03291 Pox_MCEL: mRNA capping enzyme; InterPro: IPR004971 This is a family of viral mRNA capping enzymes | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.0036 Score=61.85 Aligned_cols=118 Identities=18% Similarity=0.281 Sum_probs=65.4
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCC-C---C
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGG-G---S 125 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~-~---~ 125 (366)
...+|||||||-|.-.. +|.. ..+ -.++..|+...--.....+. ..+.+.... . +
T Consensus 62 ~~~~VLDl~CGkGGDL~------------Kw~~----~~i-~~~vg~Dis~~si~ea~~Ry----~~~~~~~~~~~~~~~ 120 (331)
T PF03291_consen 62 PGLTVLDLCCGKGGDLQ------------KWQK----AKI-KHYVGIDISEESIEEARERY----KQLKKRNNSKQYRFD 120 (331)
T ss_dssp TT-EEEEET-TTTTTHH------------HHHH----TT--SEEEEEES-HHHHHHHHHHH----HHHHTSTT-HTSEEC
T ss_pred CCCeEEEecCCCchhHH------------HHHh----cCC-CEEEEEeCCHHHHHHHHHHH----HHhcccccccccccc
Confidence 56999999999999743 2222 122 66788898643222222111 001110000 0 0
Q ss_pred CCceEEeccCCCcc---cccCCCC--cccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHH
Q 017747 126 SPSVYIAGYPGSFY---GRLFPNN--SLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQE 200 (366)
Q Consensus 126 ~~~~f~~~vpgSFy---~~lfp~~--s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~ 200 (366)
+...|+.+ -.|- ...+++. .+|++-+-.|||..=.- ++
T Consensus 121 f~a~f~~~--D~f~~~l~~~~~~~~~~FDvVScQFalHY~Fes-----------------------------------e~ 163 (331)
T PF03291_consen 121 FIAEFIAA--DCFSESLREKLPPRSRKFDVVSCQFALHYAFES-----------------------------------EE 163 (331)
T ss_dssp CEEEEEES--TTCCSHHHCTSSSTTS-EEEEEEES-GGGGGSS-----------------------------------HH
T ss_pred chhheecc--ccccchhhhhccccCCCcceeehHHHHHHhcCC-----------------------------------HH
Confidence 22233333 1222 2345555 99999999999996441 23
Q ss_pred HHHHHHHHHHHHhccCceEEEEeec
Q 017747 201 DFTLFLRSRSEELVVGGRMVLILLG 225 (366)
Q Consensus 201 D~~~FL~~Ra~EL~~GG~lvl~~~g 225 (366)
-.+.||+.-++-|+|||.++.+++-
T Consensus 164 ~ar~~l~Nvs~~Lk~GG~FIgT~~d 188 (331)
T PF03291_consen 164 KARQFLKNVSSLLKPGGYFIGTTPD 188 (331)
T ss_dssp HHHHHHHHHHHTEEEEEEEEEEEE-
T ss_pred HHHHHHHHHHHhcCCCCEEEEEecC
Confidence 3467899999999999999999873
|
The enzyme catalyses the first two reactions in the mRNA cap formation pathway. It is a heterodimer consisting of a large and small subunit. This entry is the large subunit. ; GO: 0006370 mRNA capping; PDB: 3EPP_A 3BGV_C 2VDW_C 1RI5_A 1RI3_A 1RI1_A 1Z3C_A 1RI2_A 2HV9_A 1RI4_A. |
| >PRK14966 unknown domain/N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase fusion protein; Provisional | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.0064 Score=61.71 Aligned_cols=74 Identities=19% Similarity=0.353 Sum_probs=42.9
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceE
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVY 130 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 130 (366)
..+|+|+|||+|..++.+ .+. .|..+++..|+........-+.. .. .+ .+-.|
T Consensus 252 ~~rVLDLGcGSG~IaiaL--------A~~--------~p~a~VtAVDiS~~ALe~AreNa-------~~-~g---~rV~f 304 (423)
T PRK14966 252 NGRVWDLGTGSGAVAVTV--------ALE--------RPDAFVRASDISPPALETARKNA-------AD-LG---ARVEF 304 (423)
T ss_pred CCEEEEEeChhhHHHHHH--------HHh--------CCCCEEEEEECCHHHHHHHHHHH-------HH-cC---CcEEE
Confidence 358999999999998742 221 24478999998643222221111 11 11 11123
Q ss_pred EeccCCCcccccCC-CCcccEEEcc
Q 017747 131 IAGYPGSFYGRLFP-NNSLHFIHSS 154 (366)
Q Consensus 131 ~~~vpgSFy~~lfp-~~s~~~~~S~ 154 (366)
+ -+++.+..+| .+++|+++|+
T Consensus 305 i---~gDl~e~~l~~~~~FDLIVSN 326 (423)
T PRK14966 305 A---HGSWFDTDMPSEGKWDIIVSN 326 (423)
T ss_pred E---EcchhccccccCCCccEEEEC
Confidence 3 3576665454 4589999996
|
|
| >PRK09328 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.0048 Score=58.45 Aligned_cols=24 Identities=17% Similarity=0.329 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHhccCceEEEEe
Q 017747 200 EDFTLFLRSRSEELVVGGRMVLIL 223 (366)
Q Consensus 200 ~D~~~FL~~Ra~EL~~GG~lvl~~ 223 (366)
.++..|++.-.+-|+|||++++..
T Consensus 215 ~~~~~~~~~~~~~Lk~gG~l~~e~ 238 (275)
T PRK09328 215 DFYRRIIEQAPRYLKPGGWLLLEI 238 (275)
T ss_pred HHHHHHHHHHHHhcccCCEEEEEE
Confidence 566778888889999999999964
|
|
| >KOG1331 consensus Predicted methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.0039 Score=59.74 Aligned_cols=133 Identities=17% Similarity=0.117 Sum_probs=83.1
Q ss_pred hHHHhhHHHHHHHHHHHHHHHHHHHHhhhhcCCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEec
Q 017747 17 SYARNSSLQKKASDTVKHITLEALQQLYLEIDPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLN 96 (366)
Q Consensus 17 sY~~nS~~Q~~~~~~~~~~l~~ai~~l~~~~~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~n 96 (366)
-|++.+..=...-....|++.+.+.. .+....++|.|||.|.-+. ..|..-++..
T Consensus 17 IYd~ia~~fs~tr~~~Wp~v~qfl~~-----~~~gsv~~d~gCGngky~~--------------------~~p~~~~ig~ 71 (293)
T KOG1331|consen 17 IYDKIATHFSATRAAPWPMVRQFLDS-----QPTGSVGLDVGCGNGKYLG--------------------VNPLCLIIGC 71 (293)
T ss_pred HHHHhhhhccccccCccHHHHHHHhc-----cCCcceeeecccCCcccCc--------------------CCCcceeeec
Confidence 34444444222223345566665442 2446789999999999762 2344888999
Q ss_pred CCCCCchhHHHhhCchhHHHHhhhcCCCCCC-ceEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCC
Q 017747 97 DLPTNDFNSVFKALPDFHRQLRNERGGGSSP-SVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESI 175 (366)
Q Consensus 97 DLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~-~~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~ 175 (366)
|++.- +....++. .. .+.++ +..+-.+++.|+|...|...+||||.--.-
T Consensus 72 D~c~~-----------l~~~ak~~-----~~~~~~~a----d~l~~p~~~~s~d~~lsiavihhlsT~~RR--------- 122 (293)
T KOG1331|consen 72 DLCTG-----------LLGGAKRS-----GGDNVCRA----DALKLPFREESFDAALSIAVIHHLSTRERR--------- 122 (293)
T ss_pred chhhh-----------hccccccC-----CCceeehh----hhhcCCCCCCccccchhhhhhhhhhhHHHH---------
Confidence 98741 11111111 12 12222 345777899999999999999999873211
Q ss_pred ccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEEEeecCCCCC
Q 017747 176 NKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPD 230 (366)
Q Consensus 176 nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~lvl~~~g~~~~~ 230 (366)
..-|+--.++|+|||.+.+..-+.....
T Consensus 123 ---------------------------~~~l~e~~r~lrpgg~~lvyvwa~~q~~ 150 (293)
T KOG1331|consen 123 ---------------------------ERALEELLRVLRPGGNALVYVWALEQHQ 150 (293)
T ss_pred ---------------------------HHHHHHHHHHhcCCCceEEEEehhhccC
Confidence 1124555799999999999988876544
|
|
| >PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0019 Score=58.65 Aligned_cols=36 Identities=25% Similarity=0.266 Sum_probs=25.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPT 100 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~ 100 (366)
...+|+|+|||+|..++.+.... .+..+|+..|+..
T Consensus 40 ~~~~vlDlG~GtG~~s~~~a~~~---------------~~~~~v~avD~~~ 75 (198)
T PRK00377 40 KGDMILDIGCGTGSVTVEASLLV---------------GETGKVYAVDKDE 75 (198)
T ss_pred CcCEEEEeCCcCCHHHHHHHHHh---------------CCCCEEEEEECCH
Confidence 45799999999999887521111 2336899999854
|
|
| >PLN03075 nicotianamine synthase; Provisional | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.014 Score=56.74 Aligned_cols=110 Identities=13% Similarity=0.135 Sum_probs=62.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
.+-+|||+|||.|+.|...+.. . -.|.-+++.-|...- -+.+.+.+- ....+.. ..-.
T Consensus 123 ~p~~VldIGcGpgpltaiilaa------~--------~~p~~~~~giD~d~~-ai~~Ar~~~------~~~~gL~-~rV~ 180 (296)
T PLN03075 123 VPTKVAFVGSGPLPLTSIVLAK------H--------HLPTTSFHNFDIDPS-ANDVARRLV------SSDPDLS-KRMF 180 (296)
T ss_pred CCCEEEEECCCCcHHHHHHHHH------h--------cCCCCEEEEEeCCHH-HHHHHHHHh------hhccCcc-CCcE
Confidence 5789999999999887643211 1 134568888888542 222222111 0001111 1223
Q ss_pred EEeccCCCcccccCC-CCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFP-NNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 130 f~~~vpgSFy~~lfp-~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
|..+ +-.+ +.+ .+.+|++|+. ++|-.++.++ ...|..
T Consensus 181 F~~~---Da~~-~~~~l~~FDlVF~~-ALi~~dk~~k-------------------------------------~~vL~~ 218 (296)
T PLN03075 181 FHTA---DVMD-VTESLKEYDVVFLA-ALVGMDKEEK-------------------------------------VKVIEH 218 (296)
T ss_pred EEEC---chhh-cccccCCcCEEEEe-cccccccccH-------------------------------------HHHHHH
Confidence 5543 2222 232 4689999999 7666543211 122556
Q ss_pred HHHHhccCceEEEEe
Q 017747 209 RSEELVVGGRMVLIL 223 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~ 223 (366)
-++-|+|||.+++-+
T Consensus 219 l~~~LkPGG~Lvlr~ 233 (296)
T PLN03075 219 LGKHMAPGALLMLRS 233 (296)
T ss_pred HHHhcCCCcEEEEec
Confidence 689999999999986
|
|
| >PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.0063 Score=49.69 Aligned_cols=113 Identities=20% Similarity=0.231 Sum_probs=62.6
Q ss_pred eEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceEE
Q 017747 52 INIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVYI 131 (366)
Q Consensus 52 ~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~ 131 (366)
.+|+|+|||+|..++.+ .+. + ..+++..|+-.---....+.++ . .+.. .+.-++
T Consensus 2 ~~vlD~~~G~G~~~~~~--------~~~-----~----~~~~~gvdi~~~~~~~a~~~~~-------~-~~~~-~~~~~~ 55 (117)
T PF13659_consen 2 DRVLDPGCGSGTFLLAA--------LRR-----G----AARVTGVDIDPEAVELARRNLP-------R-NGLD-DRVEVI 55 (117)
T ss_dssp EEEEEETSTTCHHHHHH--------HHH-----C----TCEEEEEESSHHHHHHHHHHCH-------H-CTTT-TTEEEE
T ss_pred CEEEEcCcchHHHHHHH--------HHH-----C----CCeEEEEEECHHHHHHHHHHHH-------H-ccCC-ceEEEE
Confidence 58999999999987642 222 1 2788888884311111111111 1 1110 122334
Q ss_pred eccCCCccccc--CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 132 AGYPGSFYGRL--FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 132 ~~vpgSFy~~l--fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
. +++..-. ++++++|+++++-=.+.....+.. -.++...|++.-
T Consensus 56 ~---~D~~~~~~~~~~~~~D~Iv~npP~~~~~~~~~~-------------------------------~~~~~~~~~~~~ 101 (117)
T PF13659_consen 56 V---GDARDLPEPLPDGKFDLIVTNPPYGPRSGDKAA-------------------------------LRRLYSRFLEAA 101 (117)
T ss_dssp E---SHHHHHHHTCTTT-EEEEEE--STTSBTT-----------------------------------GGCHHHHHHHHH
T ss_pred E---CchhhchhhccCceeEEEEECCCCccccccchh-------------------------------hHHHHHHHHHHH
Confidence 4 3444333 788999999987433211110000 011667889999
Q ss_pred HHHhccCceEEEEee
Q 017747 210 SEELVVGGRMVLILL 224 (366)
Q Consensus 210 a~EL~~GG~lvl~~~ 224 (366)
.+-|+|||.+++.+.
T Consensus 102 ~~~L~~gG~~~~~~~ 116 (117)
T PF13659_consen 102 ARLLKPGGVLVFITP 116 (117)
T ss_dssp HHHEEEEEEEEEEEE
T ss_pred HHHcCCCeEEEEEeC
Confidence 999999999999864
|
... |
| >PRK01544 bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.0044 Score=64.60 Aligned_cols=130 Identities=12% Similarity=0.191 Sum_probs=66.5
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceE
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVY 130 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 130 (366)
+.+|+|+|||+|..++.+. .. .|..+++..|+........-+. .. ..+. ...+
T Consensus 139 ~~~VLDlG~GsG~iai~la--------~~--------~p~~~v~avDis~~al~~A~~N-------~~-~~~l--~~~v- 191 (506)
T PRK01544 139 FLNILELGTGSGCIAISLL--------CE--------LPNANVIATDISLDAIEVAKSN-------AI-KYEV--TDRI- 191 (506)
T ss_pred CCEEEEccCchhHHHHHHH--------HH--------CCCCeEEEEECCHHHHHHHHHH-------HH-HcCC--ccce-
Confidence 4689999999999887432 21 2347899999964322211111 11 1111 1122
Q ss_pred EeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHH-HHHHHHHHHHHHHH
Q 017747 131 IAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYF-KQFQEDFTLFLRSR 209 (366)
Q Consensus 131 ~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~-~Q~~~D~~~FL~~R 209 (366)
..+-+++++. ++.+++|+++|+--....+..+....+ + ..-.| ..+.+. ..--..+..+++.-
T Consensus 192 -~~~~~D~~~~-~~~~~fDlIvsNPPYi~~~~~~~l~~~----------v--~~~EP--~~AL~gg~dGl~~~~~il~~a 255 (506)
T PRK01544 192 -QIIHSNWFEN-IEKQKFDFIVSNPPYISHSEKSEMAIE----------T--INYEP--SIALFAEEDGLQAYFIIAENA 255 (506)
T ss_pred -eeeecchhhh-CcCCCccEEEECCCCCCchhhhhcCch----------h--hccCc--HHHhcCCccHHHHHHHHHHHH
Confidence 1233566553 366789999997433332221111000 0 00000 000010 00123456677777
Q ss_pred HHHhccCceEEEEe
Q 017747 210 SEELVVGGRMVLIL 223 (366)
Q Consensus 210 a~EL~~GG~lvl~~ 223 (366)
.+-|+|||++++..
T Consensus 256 ~~~L~~gG~l~lEi 269 (506)
T PRK01544 256 KQFLKPNGKIILEI 269 (506)
T ss_pred HHhccCCCEEEEEE
Confidence 88999999999864
|
|
| >PF02390 Methyltransf_4: Putative methyltransferase ; InterPro: IPR003358 This entry represents tRNA (guanine-N-7) methyltransferase (2 | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.0044 Score=56.58 Aligned_cols=113 Identities=25% Similarity=0.397 Sum_probs=66.3
Q ss_pred EEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce-EE
Q 017747 53 NIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV-YI 131 (366)
Q Consensus 53 ~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~-f~ 131 (366)
.++|+|||.|...+. +... .|+..++.-|.-.+ .+.+.+... .. .+ ..++ ++
T Consensus 20 l~lEIG~G~G~~l~~--------~A~~--------~Pd~n~iGiE~~~~---~v~~a~~~~----~~-~~---l~Nv~~~ 72 (195)
T PF02390_consen 20 LILEIGCGKGEFLIE--------LAKR--------NPDINFIGIEIRKK---RVAKALRKA----EK-RG---LKNVRFL 72 (195)
T ss_dssp EEEEET-TTSHHHHH--------HHHH--------STTSEEEEEES-HH---HHHHHHHHH----HH-HT---TSSEEEE
T ss_pred eEEEecCCCCHHHHH--------HHHH--------CCCCCEEEEecchH---HHHHHHHHH----Hh-hc---ccceEEE
Confidence 889999999998763 3222 46799999998543 332222211 11 11 3354 45
Q ss_pred eccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017747 132 AGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSE 211 (366)
Q Consensus 132 ~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~ 211 (366)
.+-...+...++|++|++-++-.+-=-|-.+-. .|-++ .+ ..||..-++
T Consensus 73 ~~da~~~l~~~~~~~~v~~i~i~FPDPWpK~rH-----------~krRl----~~----------------~~fl~~~~~ 121 (195)
T PF02390_consen 73 RGDARELLRRLFPPGSVDRIYINFPDPWPKKRH-----------HKRRL----VN----------------PEFLELLAR 121 (195)
T ss_dssp ES-CTTHHHHHSTTTSEEEEEEES-----SGGG-----------GGGST----TS----------------HHHHHHHHH
T ss_pred EccHHHHHhhcccCCchheEEEeCCCCCcccch-----------hhhhc----CC----------------chHHHHHHH
Confidence 555566678889999999999887666622211 01111 01 246777789
Q ss_pred HhccCceEEEEe
Q 017747 212 ELVVGGRMVLIL 223 (366)
Q Consensus 212 EL~~GG~lvl~~ 223 (366)
-|+|||.+.+.+
T Consensus 122 ~L~~gG~l~~~T 133 (195)
T PF02390_consen 122 VLKPGGELYFAT 133 (195)
T ss_dssp HEEEEEEEEEEE
T ss_pred HcCCCCEEEEEe
Confidence 999999998875
|
1.1.33 from EC), which catalyses the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. Capping of the pre-mRNA 5' end by addition a monomethylated guanosine cap (m(7)G) is an essential and the earliest modification in the biogenesis of mRNA []. The reaction is catalysed by three enzymes: triphosphatase, guanylyltransferase, and tRNA (guanine-N-7) methyltransferase [, ].; GO: 0008176 tRNA (guanine-N7-)-methyltransferase activity, 0006400 tRNA modification; PDB: 3DXZ_A 3DXY_A 3DXX_A 3CKK_A 3P2I_B 3P2K_D 3P2E_A 3MTE_B 3PB3_B 1YZH_B .... |
| >TIGR01177 conserved hypothetical protein TIGR01177 | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.013 Score=57.72 Aligned_cols=115 Identities=15% Similarity=0.062 Sum_probs=62.9
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceE
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVY 130 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 130 (366)
..+|+|.|||+|..++. .. . ....++..|+-.......-+.+. ..|. .++
T Consensus 183 g~~vLDp~cGtG~~lie-------aa-~----------~~~~v~g~Di~~~~~~~a~~nl~--------~~g~---~~i- 232 (329)
T TIGR01177 183 GDRVLDPFCGTGGFLIE-------AG-L----------MGAKVIGCDIDWKMVAGARINLE--------HYGI---EDF- 232 (329)
T ss_pred cCEEEECCCCCCHHHHH-------HH-H----------hCCeEEEEcCCHHHHHHHHHHHH--------HhCC---CCC-
Confidence 46899999999976432 11 1 12678999985433322221111 1121 121
Q ss_pred EeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 017747 131 IAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRS 210 (366)
Q Consensus 131 ~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra 210 (366)
..+-+++.+--++++++|++++.- |-+.... .++ .....-...+|+.-+
T Consensus 233 -~~~~~D~~~l~~~~~~~D~Iv~dP--------Pyg~~~~-----~~~-----------------~~~~~l~~~~l~~~~ 281 (329)
T TIGR01177 233 -FVKRGDATKLPLSSESVDAIATDP--------PYGRSTT-----AAG-----------------DGLESLYERSLEEFH 281 (329)
T ss_pred -eEEecchhcCCcccCCCCEEEECC--------CCcCccc-----ccC-----------------CchHHHHHHHHHHHH
Confidence 122346654345678999998852 2211100 000 001122456777778
Q ss_pred HHhccCceEEEEeecC
Q 017747 211 EELVVGGRMVLILLGR 226 (366)
Q Consensus 211 ~EL~~GG~lvl~~~g~ 226 (366)
+-|+|||++++.+...
T Consensus 282 r~Lk~gG~lv~~~~~~ 297 (329)
T TIGR01177 282 EVLKSEGWIVYAVPTR 297 (329)
T ss_pred HHccCCcEEEEEEcCC
Confidence 9999999999998654
|
This family is found exclusively in the Archaea. |
| >PRK14901 16S rRNA methyltransferase B; Provisional | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.014 Score=59.62 Aligned_cols=29 Identities=21% Similarity=0.111 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHHHhccCceEEEEeecC
Q 017747 198 FQEDFTLFLRSRSEELVVGGRMVLILLGR 226 (366)
Q Consensus 198 ~~~D~~~FL~~Ra~EL~~GG~lvl~~~g~ 226 (366)
+.+.-..+|..-++-|+|||+||.++..-
T Consensus 359 l~~~Q~~iL~~a~~~lkpgG~lvystcsi 387 (434)
T PRK14901 359 LAPLQAELLESLAPLLKPGGTLVYATCTL 387 (434)
T ss_pred HHHHHHHHHHHHHHhcCCCCEEEEEeCCC
Confidence 44555788899999999999999887544
|
|
| >COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.031 Score=50.65 Aligned_cols=50 Identities=18% Similarity=0.212 Sum_probs=31.3
Q ss_pred HHHHHHHHHhhhhc--CCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCC
Q 017747 34 HITLEALQQLYLEI--DPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLP 99 (366)
Q Consensus 34 ~~l~~ai~~l~~~~--~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp 99 (366)
|+-.+.|+.+.... ..+..+++|+|||||.-|+..+ . ..|.-++|.-|--
T Consensus 16 p~TK~EIRal~ls~L~~~~g~~l~DIGaGtGsi~iE~a--------~--------~~p~~~v~AIe~~ 67 (187)
T COG2242 16 PMTKEEIRALTLSKLRPRPGDRLWDIGAGTGSITIEWA--------L--------AGPSGRVIAIERD 67 (187)
T ss_pred CCcHHHHHHHHHHhhCCCCCCEEEEeCCCccHHHHHHH--------H--------hCCCceEEEEecC
Confidence 34445555443322 2234799999999999998532 1 1345888888864
|
|
| >PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.0036 Score=59.13 Aligned_cols=17 Identities=29% Similarity=0.593 Sum_probs=14.5
Q ss_pred CceEEEeecCCCCcchH
Q 017747 50 KTINIADLGCSSGPNTL 66 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~ 66 (366)
...+|+|+|||+|..++
T Consensus 119 ~~~~VLDiGcGsG~l~i 135 (250)
T PRK00517 119 PGKTVLDVGCGSGILAI 135 (250)
T ss_pred CCCEEEEeCCcHHHHHH
Confidence 45799999999998765
|
|
| >KOG4300 consensus Predicted methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.0054 Score=56.40 Aligned_cols=154 Identities=15% Similarity=0.097 Sum_probs=86.0
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCC--c
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSP--S 128 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~--~ 128 (366)
-.-++++|||||+|=-. + +..|.-.|++-|=..|+=.-+-+ +.+.+. .. .
T Consensus 77 K~~vLEvgcGtG~Nfkf------------y-----~~~p~~svt~lDpn~~mee~~~k-------s~~E~k----~~~~~ 128 (252)
T KOG4300|consen 77 KGDVLEVGCGTGANFKF------------Y-----PWKPINSVTCLDPNEKMEEIADK-------SAAEKK----PLQVE 128 (252)
T ss_pred ccceEEecccCCCCccc------------c-----cCCCCceEEEeCCcHHHHHHHHH-------HHhhcc----CcceE
Confidence 35679999999999521 1 12355778888865542111111 222211 22 2
Q ss_pred eEEeccCCCccccc--CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRL--FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 129 ~f~~~vpgSFy~~l--fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
.|+.|-+ +++ +|+.|+|.++...+|.=..+ =..-|
T Consensus 129 ~fvva~g----e~l~~l~d~s~DtVV~TlvLCSve~---------------------------------------~~k~L 165 (252)
T KOG4300|consen 129 RFVVADG----ENLPQLADGSYDTVVCTLVLCSVED---------------------------------------PVKQL 165 (252)
T ss_pred EEEeech----hcCcccccCCeeeEEEEEEEeccCC---------------------------------------HHHHH
Confidence 4677654 444 39999999998876632111 12235
Q ss_pred HHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCce
Q 017747 207 RSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSF 286 (366)
Q Consensus 207 ~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf 286 (366)
+.-.+-|+|||++++.=-|+...+ -...+|+...+-+..+...| +.=..|.-+.++++. |
T Consensus 166 ~e~~rlLRpgG~iifiEHva~~y~----~~n~i~q~v~ep~~~~~~dG---------------C~ltrd~~e~Leda~-f 225 (252)
T KOG4300|consen 166 NEVRRLLRPGGRIIFIEHVAGEYG----FWNRILQQVAEPLWHLESDG---------------CVLTRDTGELLEDAE-F 225 (252)
T ss_pred HHHHHhcCCCcEEEEEecccccch----HHHHHHHHHhchhhheeccc---------------eEEehhHHHHhhhcc-c
Confidence 566899999999999977775431 11223332222222222223 222345556677664 7
Q ss_pred EEeeEEEEe
Q 017747 287 KLDQLDMFQ 295 (366)
Q Consensus 287 ~i~~~e~~~ 295 (366)
++...+.+.
T Consensus 226 ~~~~~kr~~ 234 (252)
T KOG4300|consen 226 SIDSCKRFN 234 (252)
T ss_pred ccchhhccc
Confidence 777666554
|
|
| >TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.014 Score=55.57 Aligned_cols=30 Identities=17% Similarity=0.125 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHHHHHhccCceEEEEeecC
Q 017747 197 QFQEDFTLFLRSRSEELVVGGRMVLILLGR 226 (366)
Q Consensus 197 Q~~~D~~~FL~~Ra~EL~~GG~lvl~~~g~ 226 (366)
+..+.-..+|+.=++-|+|||+||.++...
T Consensus 173 ~l~~~q~~iL~~a~~~lkpgG~lvYstcs~ 202 (264)
T TIGR00446 173 EISALQKELIDSAFDALKPGGVLVYSTCSL 202 (264)
T ss_pred HHHHHHHHHHHHHHHhcCCCCEEEEEeCCC
Confidence 344455668888899999999999887544
|
|
| >COG2813 RsmC 16S RNA G1207 methylase RsmC [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.019 Score=55.63 Aligned_cols=106 Identities=19% Similarity=0.328 Sum_probs=61.7
Q ss_pred eEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc--e
Q 017747 52 INIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS--V 129 (366)
Q Consensus 52 ~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~--~ 129 (366)
.+|||+|||-|..++. +.+. .|..++.+.|. |+-.+-. -+..++.+. ..+ +
T Consensus 160 ~~vlDlGCG~Gvlg~~--------la~~--------~p~~~vtmvDv---n~~Av~~----ar~Nl~~N~----~~~~~v 212 (300)
T COG2813 160 GKVLDLGCGYGVLGLV--------LAKK--------SPQAKLTLVDV---NARAVES----ARKNLAANG----VENTEV 212 (300)
T ss_pred CcEEEeCCCccHHHHH--------HHHh--------CCCCeEEEEec---CHHHHHH----HHHhHHHcC----CCccEE
Confidence 4899999999999874 3332 45799999997 3333311 111122221 122 3
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
|.+ +-|+.+.. ++|+++|+ |+....+. +. ..+. .+++..=
T Consensus 213 ~~s----~~~~~v~~--kfd~IisN---------PPfh~G~~-------------v~-~~~~-----------~~~i~~A 252 (300)
T COG2813 213 WAS----NLYEPVEG--KFDLIISN---------PPFHAGKA-------------VV-HSLA-----------QEIIAAA 252 (300)
T ss_pred EEe----cccccccc--cccEEEeC---------CCccCCcc-------------hh-HHHH-----------HHHHHHH
Confidence 333 44666655 89999986 54332210 00 0111 1344455
Q ss_pred HHHhccCceEEEEee
Q 017747 210 SEELVVGGRMVLILL 224 (366)
Q Consensus 210 a~EL~~GG~lvl~~~ 224 (366)
.+-|++||.|.+..-
T Consensus 253 ~~~L~~gGeL~iVan 267 (300)
T COG2813 253 ARHLKPGGELWIVAN 267 (300)
T ss_pred HHhhccCCEEEEEEc
Confidence 788999999999875
|
|
| >TIGR00417 speE spermidine synthase | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.012 Score=56.39 Aligned_cols=114 Identities=15% Similarity=0.119 Sum_probs=61.4
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+++.+|+|+|||+|..+..+ + +. .+.-++...|+..+-....-+.++...... . .++
T Consensus 71 ~~p~~VL~iG~G~G~~~~~l-------l-~~--------~~~~~v~~veid~~vi~~a~~~~~~~~~~~------~-~~~ 127 (270)
T TIGR00417 71 PNPKHVLVIGGGDGGVLREV-------L-KH--------KSVEKATLVDIDEKVIELSKKFLPSLAGSY------D-DPR 127 (270)
T ss_pred CCCCEEEEEcCCchHHHHHH-------H-hC--------CCcceEEEEeCCHHHHHHHHHHhHhhcccc------c-CCc
Confidence 45679999999999966432 1 11 122567888886654443333332211000 0 112
Q ss_pred e-EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 129 ~-f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
+ ++.+-+..|..+ .++++|++++..+-++-. +. ..|. ..|++
T Consensus 128 v~i~~~D~~~~l~~--~~~~yDvIi~D~~~~~~~--~~--------------------------~l~~-------~ef~~ 170 (270)
T TIGR00417 128 VDLQIDDGFKFLAD--TENTFDVIIVDSTDPVGP--AE--------------------------TLFT-------KEFYE 170 (270)
T ss_pred eEEEECchHHHHHh--CCCCccEEEEeCCCCCCc--cc--------------------------chhH-------HHHHH
Confidence 2 222322233333 257899998865433210 00 0111 35667
Q ss_pred HHHHHhccCceEEEE
Q 017747 208 SRSEELVVGGRMVLI 222 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~ 222 (366)
..++-|+|||++++.
T Consensus 171 ~~~~~L~pgG~lv~~ 185 (270)
T TIGR00417 171 LLKKALNEDGIFVAQ 185 (270)
T ss_pred HHHHHhCCCcEEEEc
Confidence 778999999999987
|
the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM. |
| >PF05891 Methyltransf_PK: AdoMet dependent proline di-methyltransferase; InterPro: IPR008576 This family consists of several eukaryotic proteins of unknown function that are S-adenosyl-L-methionine-dependent methyltransferase-like | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.0045 Score=57.34 Aligned_cols=93 Identities=22% Similarity=0.306 Sum_probs=56.6
Q ss_pred CceEEeccCCCcccccCCC-CcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 017747 127 PSVYIAGYPGSFYGRLFPN-NSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLF 205 (366)
Q Consensus 127 ~~~f~~~vpgSFy~~lfp~-~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~F 205 (366)
..+|.++. +..-|+ +..|++|.-+++..|.+ .||..|
T Consensus 106 ~~~~~~gL-----Q~f~P~~~~YDlIW~QW~lghLTD-------------------------------------~dlv~f 143 (218)
T PF05891_consen 106 GEFYCVGL-----QDFTPEEGKYDLIWIQWCLGHLTD-------------------------------------EDLVAF 143 (218)
T ss_dssp EEEEES-G-----GG----TT-EEEEEEES-GGGS-H-------------------------------------HHHHHH
T ss_pred ceEEecCH-----hhccCCCCcEeEEEehHhhccCCH-------------------------------------HHHHHH
Confidence 35677764 444565 69999998777666543 699999
Q ss_pred HHHHHHHhccCceEEEE-eecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcC
Q 017747 206 LRSRSEELVVGGRMVLI-LLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREG 284 (366)
Q Consensus 206 L~~Ra~EL~~GG~lvl~-~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~g 284 (366)
|+.+.+.|+|||.+|+= ....... ..++++ | -...||.+.++++++++|
T Consensus 144 L~RCk~~L~~~G~IvvKEN~~~~~~------------------------~~~D~~--D----sSvTRs~~~~~~lF~~AG 193 (218)
T PF05891_consen 144 LKRCKQALKPNGVIVVKENVSSSGF------------------------DEFDEE--D----SSVTRSDEHFRELFKQAG 193 (218)
T ss_dssp HHHHHHHEEEEEEEEEEEEEESSSE------------------------EEEETT--T----TEEEEEHHHHHHHHHHCT
T ss_pred HHHHHHhCcCCcEEEEEecCCCCCC------------------------cccCCc--c----CeeecCHHHHHHHHHHcC
Confidence 99999999999988874 1111100 011111 1 124577899999999999
Q ss_pred ceEEeeEE
Q 017747 285 SFKLDQLD 292 (366)
Q Consensus 285 sf~i~~~e 292 (366)
+++.+-+
T Consensus 194 -l~~v~~~ 200 (218)
T PF05891_consen 194 -LRLVKEE 200 (218)
T ss_dssp --EEEEEE
T ss_pred -CEEEEec
Confidence 7775444
|
; GO: 0008168 methyltransferase activity; PDB: 1XTP_A 2EX4_B. |
| >COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.004 Score=60.43 Aligned_cols=33 Identities=24% Similarity=0.294 Sum_probs=24.5
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLP 99 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp 99 (366)
+..+++|+|||||-.++. ..+. |. ..++..|+-
T Consensus 162 ~g~~vlDvGcGSGILaIA--------a~kL-----GA----~~v~g~DiD 194 (300)
T COG2264 162 KGKTVLDVGCGSGILAIA--------AAKL-----GA----KKVVGVDID 194 (300)
T ss_pred CCCEEEEecCChhHHHHH--------HHHc-----CC----ceEEEecCC
Confidence 579999999999999974 2221 32 678888873
|
|
| >PRK04457 spermidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.015 Score=55.47 Aligned_cols=24 Identities=25% Similarity=0.284 Sum_probs=19.9
Q ss_pred HHHHHHHHHhccCceEEEEeecCC
Q 017747 204 LFLRSRSEELVVGGRMVLILLGRI 227 (366)
Q Consensus 204 ~FL~~Ra~EL~~GG~lvl~~~g~~ 227 (366)
.|++...+-|+|||++++++.+++
T Consensus 158 efl~~~~~~L~pgGvlvin~~~~~ 181 (262)
T PRK04457 158 PFFDDCRNALSSDGIFVVNLWSRD 181 (262)
T ss_pred HHHHHHHHhcCCCcEEEEEcCCCc
Confidence 567788888999999999877654
|
|
| >PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.0075 Score=59.36 Aligned_cols=19 Identities=21% Similarity=0.494 Sum_probs=16.0
Q ss_pred CceEEEeecCCCCcchHHH
Q 017747 50 KTINIADLGCSSGPNTLAI 68 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~ 68 (366)
+..+|+|+|||+|.+++.+
T Consensus 80 ~g~~VLDIG~GtG~~a~~L 98 (322)
T PRK13943 80 KGMRVLEIGGGTGYNAAVM 98 (322)
T ss_pred CCCEEEEEeCCccHHHHHH
Confidence 3479999999999999753
|
|
| >PLN02366 spermidine synthase | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.022 Score=55.75 Aligned_cols=116 Identities=17% Similarity=0.182 Sum_probs=62.7
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+++-+|+++|||+|..... +.+. ++.-+|...|+...--....+.++.... +.. .++
T Consensus 90 ~~pkrVLiIGgG~G~~~re--------llk~--------~~v~~V~~VEiD~~Vi~~ar~~f~~~~~------~~~-dpR 146 (308)
T PLN02366 90 PNPKKVLVVGGGDGGVLRE--------IARH--------SSVEQIDICEIDKMVIDVSKKFFPDLAV------GFD-DPR 146 (308)
T ss_pred CCCCeEEEEcCCccHHHHH--------HHhC--------CCCCeEEEEECCHHHHHHHHHhhhhhcc------ccC-CCc
Confidence 5688999999999996532 2221 2225677778765322222222222110 111 222
Q ss_pred e-EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 129 ~-f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
+ ++.+-+..|.+. .|++++|++++-.+-+|- |. ...|. ..|++
T Consensus 147 v~vi~~Da~~~l~~-~~~~~yDvIi~D~~dp~~---~~-------------------------~~L~t-------~ef~~ 190 (308)
T PLN02366 147 VNLHIGDGVEFLKN-APEGTYDAIIVDSSDPVG---PA-------------------------QELFE-------KPFFE 190 (308)
T ss_pred eEEEEChHHHHHhh-ccCCCCCEEEEcCCCCCC---ch-------------------------hhhhH-------HHHHH
Confidence 2 444433344333 256789999985544431 10 11111 35667
Q ss_pred HHHHHhccCceEEEEe
Q 017747 208 SRSEELVVGGRMVLIL 223 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~ 223 (366)
...+-|+|||.|+...
T Consensus 191 ~~~~~L~pgGvlv~q~ 206 (308)
T PLN02366 191 SVARALRPGGVVCTQA 206 (308)
T ss_pred HHHHhcCCCcEEEECc
Confidence 7788999999997653
|
|
| >TIGR03704 PrmC_rel_meth putative protein-(glutamine-N5) methyltransferase, unknown substrate-specific | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.058 Score=51.13 Aligned_cols=22 Identities=14% Similarity=0.229 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHhccCceEEEEe
Q 017747 202 FTLFLRSRSEELVVGGRMVLIL 223 (366)
Q Consensus 202 ~~~FL~~Ra~EL~~GG~lvl~~ 223 (366)
+..++..=.+-|+|||++++..
T Consensus 195 ~~~i~~~a~~~L~~gG~l~l~~ 216 (251)
T TIGR03704 195 LRRVAAGAPDWLAPGGHLLVET 216 (251)
T ss_pred HHHHHHHHHHhcCCCCEEEEEE
Confidence 4567777788999999999885
|
This protein family is closely related to two different families of protein-(glutamine-N5) methyltransferase. The first is PrmB, which modifies ribosomal protein L3 in some bacteria. The second is PrmC (HemK), which modifies peptide chain release factors 1 and 2 in most bacteria and also in eukaryotes. The glutamine side chain-binding motif NPPY shared by PrmB and PrmC is N[VAT]PY in this family. The protein substrate is unknown. |
| >PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2 | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.018 Score=53.28 Aligned_cols=17 Identities=18% Similarity=0.274 Sum_probs=13.6
Q ss_pred ceEEEeecCCCCcchHH
Q 017747 51 TINIADLGCSSGPNTLA 67 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~ 67 (366)
-.+|+|+|||+|++|..
T Consensus 73 g~~VLeIGtGsGY~aAl 89 (209)
T PF01135_consen 73 GDRVLEIGTGSGYQAAL 89 (209)
T ss_dssp T-EEEEES-TTSHHHHH
T ss_pred CCEEEEecCCCcHHHHH
Confidence 48999999999999975
|
1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A .... |
| >KOG1975 consensus mRNA cap methyltransferase [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.038 Score=54.05 Aligned_cols=118 Identities=19% Similarity=0.300 Sum_probs=72.1
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceE
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVY 130 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 130 (366)
.-.++|||||-|.-.+- +.. .. .-+++..|...---++.-++-.+..+.-++. - ++..|
T Consensus 118 ~~~~~~LgCGKGGDLlK------------w~k----Ag-I~~~igiDIAevSI~qa~~RYrdm~~r~~~~---~-f~a~f 176 (389)
T KOG1975|consen 118 GDDVLDLGCGKGGDLLK------------WDK----AG-IGEYIGIDIAEVSINQARKRYRDMKNRFKKF---I-FTAVF 176 (389)
T ss_pred ccccceeccCCcccHhH------------hhh----hc-ccceEeeehhhccHHHHHHHHHHHHhhhhcc---c-ceeEE
Confidence 35678999999997542 111 11 1457777776544444433322222211110 0 44667
Q ss_pred EeccCCCccccc---C--CCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 017747 131 IAGYPGSFYGRL---F--PNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLF 205 (366)
Q Consensus 131 ~~~vpgSFy~~l---f--p~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~F 205 (366)
++| -+|+++| + ++-++|++=+=+|+|+.=. + ..-...+
T Consensus 177 ~~~--Dc~~~~l~d~~e~~dp~fDivScQF~~HYaFe------t-----------------------------ee~ar~~ 219 (389)
T KOG1975|consen 177 IAA--DCFKERLMDLLEFKDPRFDIVSCQFAFHYAFE------T-----------------------------EESARIA 219 (389)
T ss_pred EEe--ccchhHHHHhccCCCCCcceeeeeeeEeeeec------c-----------------------------HHHHHHH
Confidence 776 4677554 3 4555999999999999422 1 1122456
Q ss_pred HHHHHHHhccCceEEEEeecC
Q 017747 206 LRSRSEELVVGGRMVLILLGR 226 (366)
Q Consensus 206 L~~Ra~EL~~GG~lvl~~~g~ 226 (366)
|+.-++-|+|||.|+-+++-.
T Consensus 220 l~Nva~~LkpGG~FIgTiPds 240 (389)
T KOG1975|consen 220 LRNVAKCLKPGGVFIGTIPDS 240 (389)
T ss_pred HHHHHhhcCCCcEEEEecCcH
Confidence 888999999999999998544
|
|
| >COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.025 Score=52.21 Aligned_cols=18 Identities=17% Similarity=0.272 Sum_probs=15.8
Q ss_pred CceEEEeecCCCCcchHH
Q 017747 50 KTINIADLGCSSGPNTLA 67 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~ 67 (366)
...+|+|+|||+|++|..
T Consensus 72 ~g~~VLEIGtGsGY~aAv 89 (209)
T COG2518 72 PGDRVLEIGTGSGYQAAV 89 (209)
T ss_pred CCCeEEEECCCchHHHHH
Confidence 469999999999999864
|
|
| >PRK07402 precorrin-6B methylase; Provisional | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.031 Score=50.55 Aligned_cols=23 Identities=26% Similarity=0.278 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHhccCceEEEEee
Q 017747 202 FTLFLRSRSEELVVGGRMVLILL 224 (366)
Q Consensus 202 ~~~FL~~Ra~EL~~GG~lvl~~~ 224 (366)
+..+|+.-.+-|+|||++++...
T Consensus 121 ~~~~l~~~~~~LkpgG~li~~~~ 143 (196)
T PRK07402 121 IKEILQAVWQYLKPGGRLVATAS 143 (196)
T ss_pred HHHHHHHHHHhcCCCeEEEEEee
Confidence 45567777788999999999974
|
|
| >COG4976 Predicted methyltransferase (contains TPR repeat) [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.014 Score=54.58 Aligned_cols=63 Identities=14% Similarity=0.239 Sum_probs=40.9
Q ss_pred HHHHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcC
Q 017747 205 FLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREG 284 (366)
Q Consensus 205 FL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~g 284 (366)
++-.-+.-|+|||.|.++.=..++.. .+ .+.. .--|..+..=|++.++..|
T Consensus 207 ~~~~aa~~L~~gGlfaFSvE~l~~~~------~f---~l~p--------------------s~RyAH~~~YVr~~l~~~G 257 (287)
T COG4976 207 LFAGAAGLLAPGGLFAFSVETLPDDG------GF---VLGP--------------------SQRYAHSESYVRALLAASG 257 (287)
T ss_pred HHHHHHHhcCCCceEEEEecccCCCC------Ce---ecch--------------------hhhhccchHHHHHHHHhcC
Confidence 34455899999999999964333221 01 1111 1126667778999999999
Q ss_pred ceEEeeEEEEeec
Q 017747 285 SFKLDQLDMFQVE 297 (366)
Q Consensus 285 sf~i~~~e~~~~~ 297 (366)
|++..++.....
T Consensus 258 -l~~i~~~~ttiR 269 (287)
T COG4976 258 -LEVIAIEDTTIR 269 (287)
T ss_pred -ceEEEeecccch
Confidence 899888765544
|
|
| >PRK01544 bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.057 Score=56.41 Aligned_cols=140 Identities=19% Similarity=0.145 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcCCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCc
Q 017747 23 SLQKKASDTVKHITLEALQQLYLEIDPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTND 102 (366)
Q Consensus 23 ~~Q~~~~~~~~~~l~~ai~~l~~~~~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~ND 102 (366)
..|++.++...|.+.=....+. ....-.++|+|||.|..++. +.+ ..|+..++.-|.-.+
T Consensus 323 ~~q~~~~e~~~p~~~i~~eklf---~~~~p~~lEIG~G~G~~~~~--------~A~--------~~p~~~~iGiE~~~~- 382 (506)
T PRK01544 323 GVQQNLLDNELPKYLFSKEKLV---NEKRKVFLEIGFGMGEHFIN--------QAK--------MNPDALFIGVEVYLN- 382 (506)
T ss_pred HHHHHHHHhhhhhhCCCHHHhC---CCCCceEEEECCCchHHHHH--------HHH--------hCCCCCEEEEEeeHH-
Confidence 3788888887777654333322 12346779999999998763 222 356788888888643
Q ss_pred hhHHHhhCchhHHHHhhhcCCCCCCceEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEE
Q 017747 103 FNSVFKALPDFHRQLRNERGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYI 182 (366)
Q Consensus 103 Fn~lf~~l~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~ 182 (366)
.+-+.+.. .. ..+ ..++.+......+....||++|||-++-++-=-| |+.-- .|-++.
T Consensus 383 --~~~~~~~~----~~-~~~---l~N~~~~~~~~~~~~~~~~~~sv~~i~i~FPDPW----pKkrh-------~krRl~- 440 (506)
T PRK01544 383 --GVANVLKL----AG-EQN---ITNFLLFPNNLDLILNDLPNNSLDGIYILFPDPW----IKNKQ-------KKKRIF- 440 (506)
T ss_pred --HHHHHHHH----HH-HcC---CCeEEEEcCCHHHHHHhcCcccccEEEEECCCCC----CCCCC-------cccccc-
Confidence 23222211 11 111 3456543322233467799999999999988777 33110 111221
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEEEe
Q 017747 183 SESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLIL 223 (366)
Q Consensus 183 ~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~lvl~~ 223 (366)
. ..||..-++-|+|||.+.+.+
T Consensus 441 --------~-----------~~fl~~~~~~Lk~gG~i~~~T 462 (506)
T PRK01544 441 --------N-----------KERLKILQDKLKDNGNLVFAS 462 (506)
T ss_pred --------C-----------HHHHHHHHHhcCCCCEEEEEc
Confidence 1 246677789999999999875
|
|
| >PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences | Back alignment and domain information |
|---|
Probab=95.42 E-value=0.02 Score=55.74 Aligned_cols=17 Identities=35% Similarity=0.647 Sum_probs=14.0
Q ss_pred ceEEEeecCCCCcchHH
Q 017747 51 TINIADLGCSSGPNTLA 67 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~ 67 (366)
..+|+|+|||||-.++.
T Consensus 162 g~~vLDvG~GSGILaia 178 (295)
T PF06325_consen 162 GKRVLDVGCGSGILAIA 178 (295)
T ss_dssp TSEEEEES-TTSHHHHH
T ss_pred CCEEEEeCCcHHHHHHH
Confidence 46999999999999974
|
Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A .... |
| >PRK03612 spermidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=95.37 E-value=0.056 Score=56.66 Aligned_cols=117 Identities=17% Similarity=0.106 Sum_probs=61.4
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHh--hCchhHHHHhhhcCCCCC
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFK--ALPDFHRQLRNERGGGSS 126 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~--~l~~~~~~~~~~~~~~~~ 126 (366)
+++.+|+|+|||+|..+.. +.++ ++.-++...|+-..-....-+ .++..... ... .
T Consensus 296 ~~~~rVL~IG~G~G~~~~~--------ll~~--------~~v~~v~~VEid~~vi~~ar~~~~l~~~~~~-----~~~-d 353 (521)
T PRK03612 296 ARPRRVLVLGGGDGLALRE--------VLKY--------PDVEQVTLVDLDPAMTELARTSPALRALNGG-----ALD-D 353 (521)
T ss_pred CCCCeEEEEcCCccHHHHH--------HHhC--------CCcCeEEEEECCHHHHHHHHhCCcchhhhcc-----ccC-C
Confidence 5678999999999987643 2121 122578888885543333222 12111100 000 1
Q ss_pred Cce-EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 017747 127 PSV-YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLF 205 (366)
Q Consensus 127 ~~~-f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~F 205 (366)
+++ ++.+.+..|-.+ .++++|++++...-+|- |. ..+.|. ..|
T Consensus 354 prv~vi~~Da~~~l~~--~~~~fDvIi~D~~~~~~---~~------------------------~~~L~t-------~ef 397 (521)
T PRK03612 354 PRVTVVNDDAFNWLRK--LAEKFDVIIVDLPDPSN---PA------------------------LGKLYS-------VEF 397 (521)
T ss_pred CceEEEEChHHHHHHh--CCCCCCEEEEeCCCCCC---cc------------------------hhccch-------HHH
Confidence 222 344333333222 34689999988443331 10 011111 235
Q ss_pred HHHHHHHhccCceEEEEe
Q 017747 206 LRSRSEELVVGGRMVLIL 223 (366)
Q Consensus 206 L~~Ra~EL~~GG~lvl~~ 223 (366)
++.-.+-|+|||++++..
T Consensus 398 ~~~~~~~L~pgG~lv~~~ 415 (521)
T PRK03612 398 YRLLKRRLAPDGLLVVQS 415 (521)
T ss_pred HHHHHHhcCCCeEEEEec
Confidence 566678899999999875
|
|
| >PF12147 Methyltransf_20: Putative methyltransferase; InterPro: IPR022744 This C-terminal region is found in bacteria and eukaryotes and is approximately 110 amino acids in length | Back alignment and domain information |
|---|
Probab=95.26 E-value=0.44 Score=46.22 Aligned_cols=52 Identities=17% Similarity=0.326 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHhhhhcCCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCC
Q 017747 32 VKHITLEALQQLYLEIDPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLP 99 (366)
Q Consensus 32 ~~~~l~~ai~~l~~~~~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp 99 (366)
+..+|++++..+.. ...+++|+|+-||+|+- |++++.+. ...| .++.++|..
T Consensus 119 l~~~i~~ai~~L~~--~g~pvrIlDIAaG~GRY-------vlDal~~~------~~~~-~~i~LrDys 170 (311)
T PF12147_consen 119 LEELIRQAIARLRE--QGRPVRILDIAAGHGRY-------VLDALEKH------PERP-DSILLRDYS 170 (311)
T ss_pred HHHHHHHHHHHHHh--cCCceEEEEeccCCcHH-------HHHHHHhC------CCCC-ceEEEEeCC
Confidence 56677777776643 36789999999999986 44556442 1123 688999874
|
It is found in association with PF00561 from PFAM. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins. This domain belongs to the S-adenosyl-L-methionine-dependent methyltransferases superfamily. |
| >smart00650 rADc Ribosomal RNA adenine dimethylases | Back alignment and domain information |
|---|
Probab=95.23 E-value=0.014 Score=51.50 Aligned_cols=75 Identities=7% Similarity=0.012 Sum_probs=43.4
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceE
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVY 130 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 130 (366)
..+|+|+|||+|..|..+++. ..+++.-|+.......+-+.+.. ..++-
T Consensus 14 ~~~vLEiG~G~G~lt~~l~~~------------------~~~v~~vE~~~~~~~~~~~~~~~-------------~~~v~ 62 (169)
T smart00650 14 GDTVLEIGPGKGALTEELLER------------------AARVTAIEIDPRLAPRLREKFAA-------------ADNLT 62 (169)
T ss_pred cCEEEEECCCccHHHHHHHhc------------------CCeEEEEECCHHHHHHHHHHhcc-------------CCCEE
Confidence 468999999999999753221 14677777754322222111110 11221
Q ss_pred EeccCCCcccccCCCCcccEEEcccccc
Q 017747 131 IAGYPGSFYGRLFPNNSLHFIHSSNSLH 158 (366)
Q Consensus 131 ~~~vpgSFy~~lfp~~s~~~~~S~~alh 158 (366)
.+-+++.+-.+++.++|.++|+.-.|
T Consensus 63 --ii~~D~~~~~~~~~~~d~vi~n~Py~ 88 (169)
T smart00650 63 --VIHGDALKFDLPKLQPYKVVGNLPYN 88 (169)
T ss_pred --EEECchhcCCccccCCCEEEECCCcc
Confidence 23467766667777788888864444
|
|
| >COG2890 HemK Methylase of polypeptide chain release factors [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.11 Score=50.22 Aligned_cols=125 Identities=19% Similarity=0.264 Sum_probs=65.4
Q ss_pred EEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceEEe
Q 017747 53 NIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVYIA 132 (366)
Q Consensus 53 ~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~~ 132 (366)
+|+|+|||||..++. +.+. .|...|+..|+...=....-+ .. ..++ ..++++.
T Consensus 113 ~ilDlGTGSG~iai~--------la~~--------~~~~~V~a~Dis~~Al~~A~~-------Na-~~~~---l~~~~~~ 165 (280)
T COG2890 113 RILDLGTGSGAIAIA--------LAKE--------GPDAEVIAVDISPDALALARE-------NA-ERNG---LVRVLVV 165 (280)
T ss_pred cEEEecCChHHHHHH--------HHhh--------CcCCeEEEEECCHHHHHHHHH-------HH-HHcC---CccEEEE
Confidence 899999999999874 3332 344799999996421111100 01 1111 1122222
Q ss_pred ccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHH-HHHHHHHHHHHHHH
Q 017747 133 GYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQ-FQEDFTLFLRSRSE 211 (366)
Q Consensus 133 ~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q-~~~D~~~FL~~Ra~ 211 (366)
. ++.++.+-. .+|+++|+ |+-+..+ .+....+-+. -.| ....+..- --+..++|+..=.+
T Consensus 166 -~-~dlf~~~~~--~fDlIVsN---------PPYip~~-~~~~~~~~~~---~EP--~~Al~~g~dGl~~~~~i~~~a~~ 226 (280)
T COG2890 166 -Q-SDLFEPLRG--KFDLIVSN---------PPYIPAE-DPELLPEVVR---YEP--LLALVGGGDGLEVYRRILGEAPD 226 (280)
T ss_pred -e-eecccccCC--ceeEEEeC---------CCCCCCc-ccccChhhhc---cCH--HHHHccCccHHHHHHHHHHhhHH
Confidence 2 266566544 89999996 6655442 1111110000 000 11111111 12345677777888
Q ss_pred HhccCceEEEEe
Q 017747 212 ELVVGGRMVLIL 223 (366)
Q Consensus 212 EL~~GG~lvl~~ 223 (366)
-|+|||.+++..
T Consensus 227 ~l~~~g~l~le~ 238 (280)
T COG2890 227 ILKPGGVLILEI 238 (280)
T ss_pred HcCCCcEEEEEE
Confidence 899999888875
|
|
| >PRK01581 speE spermidine synthase; Validated | Back alignment and domain information |
|---|
Probab=94.84 E-value=0.1 Score=52.21 Aligned_cols=119 Identities=17% Similarity=0.116 Sum_probs=61.5
Q ss_pred CCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCC
Q 017747 48 DPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSP 127 (366)
Q Consensus 48 ~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~ 127 (366)
.+++.+|+++|||+|..... +.+. ++..+|...|+-... -.+.+..+.+.. ..+ .+.. .+
T Consensus 148 h~~PkrVLIIGgGdG~tlre--------lLk~--------~~v~~It~VEIDpeV-IelAr~~~~L~~-~~~-~~~~-Dp 207 (374)
T PRK01581 148 VIDPKRVLILGGGDGLALRE--------VLKY--------ETVLHVDLVDLDGSM-INMARNVPELVS-LNK-SAFF-DN 207 (374)
T ss_pred CCCCCEEEEECCCHHHHHHH--------HHhc--------CCCCeEEEEeCCHHH-HHHHHhccccch-hcc-ccCC-CC
Confidence 35678999999999984322 1111 233678888886532 223332222111 000 0001 22
Q ss_pred ce-EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 128 SV-YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 128 ~~-f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
++ .+.+-+..|-.. .++++|+++... |.+... .....|. ..|+
T Consensus 208 RV~vvi~Da~~fL~~--~~~~YDVIIvDl--------~DP~~~-------------------~~~~LyT-------~EFy 251 (374)
T PRK01581 208 RVNVHVCDAKEFLSS--PSSLYDVIIIDF--------PDPATE-------------------LLSTLYT-------SELF 251 (374)
T ss_pred ceEEEECcHHHHHHh--cCCCccEEEEcC--------CCcccc-------------------chhhhhH-------HHHH
Confidence 33 233333333322 356789988762 211100 0112222 3566
Q ss_pred HHHHHHhccCceEEEE
Q 017747 207 RSRSEELVVGGRMVLI 222 (366)
Q Consensus 207 ~~Ra~EL~~GG~lvl~ 222 (366)
+...+-|+|||+|++.
T Consensus 252 ~~~~~~LkPgGV~V~Q 267 (374)
T PRK01581 252 ARIATFLTEDGAFVCQ 267 (374)
T ss_pred HHHHHhcCCCcEEEEe
Confidence 7778889999999887
|
|
| >PF01728 FtsJ: FtsJ-like methyltransferase; InterPro: IPR002877 RrmJ (FtsJ) is a well conserved heat shock protein present in prokaryotes, archaea, and eukaryotes | Back alignment and domain information |
|---|
Probab=94.30 E-value=0.22 Score=44.24 Aligned_cols=37 Identities=22% Similarity=0.223 Sum_probs=26.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTN 101 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~N 101 (366)
+..+++|+|||.|.-|.. +.++ ..+.-.|+..|+...
T Consensus 23 ~~~~vlDlG~aPGGws~~--------~~~~-------~~~~~~v~avDl~~~ 59 (181)
T PF01728_consen 23 KGFTVLDLGAAPGGWSQV--------LLQR-------GGPAGRVVAVDLGPM 59 (181)
T ss_dssp TTEEEEEET-TTSHHHHH--------HHTS-------TTTEEEEEEEESSST
T ss_pred cccEEEEcCCcccceeee--------eeec-------ccccceEEEEecccc
Confidence 569999999999999864 2221 123488999999764
|
RrmJ is responsible for methylating 23 S rRNA at position U2552 in the aminoacyl (A)1-site of the ribosome []. U2552 is one of the five universally conserved A-loop residues and has been shown to be methylated at the ribose 2'-OH group in the majority of organisms investigated so far. This suggests that this modification plays an important role in the A-loop function. RrmJ recognises its methylation target only when the 23 S rRNA is present in 50 S ribosomal subunits. This suggests that the RrmJ-mediated methylation must occur late in the maturation process of the ribosome. This is in contrast to other known 23 S rRNA modifications that occur in earlier maturation steps. The 1.5 A crystal structure of RrmJ in complex with its cofactor S-adenosylmethionine revealed that RrmJ has a methyltransferase fold. The active site of RrmJ appears to be formed by a catalytic triad consisting of two lysine residues and the negatively charged aspartate residue. Another highly conserved glutamate residue that is present in the active site of RrmJ appears to play only a minor role in the methyltransfer reaction in vivo []. ; GO: 0003676 nucleic acid binding, 0008168 methyltransferase activity, 0032259 methylation; PDB: 3GCZ_A 2PLW_A 2NYU_A 2OXT_C 3EMD_A 3ELY_A 3ELW_A 3ELU_A 3ELD_A 3EMB_A .... |
| >TIGR03439 methyl_EasF probable methyltransferase domain, EasF family | Back alignment and domain information |
|---|
Probab=94.23 E-value=0.35 Score=47.64 Aligned_cols=69 Identities=17% Similarity=0.334 Sum_probs=42.4
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+...+|+|||||+|.-|..+++.+. .. .. .+..+--|+...--....+.|. . .. ++.
T Consensus 75 ~~~~~lIELGsG~~~Kt~~LL~aL~----~~-------~~-~~~Y~plDIS~~~L~~a~~~L~-------~---~~-~p~ 131 (319)
T TIGR03439 75 PSGSMLVELGSGNLRKVGILLEALE----RQ-------KK-SVDYYALDVSRSELQRTLAELP-------L---GN-FSH 131 (319)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHH----hc-------CC-CceEEEEECCHHHHHHHHHhhh-------h---cc-CCC
Confidence 3456899999999999987766652 11 12 2788999997642222222222 0 11 455
Q ss_pred eEEeccCCCccc
Q 017747 129 VYIAGYPGSFYG 140 (366)
Q Consensus 129 ~f~~~vpgSFy~ 140 (366)
+-+.++-|+|..
T Consensus 132 l~v~~l~gdy~~ 143 (319)
T TIGR03439 132 VRCAGLLGTYDD 143 (319)
T ss_pred eEEEEEEecHHH
Confidence 666777778844
|
This model represents an uncharacterized domain of about 300 amino acids with homology to S-adenosylmethionine-dependent methyltransferases. Proteins with this domain are exclusively fungal. A few, such as EasF from Neotyphodium lolii, are associated with the biosynthesis of ergot alkaloids, a class of fungal secondary metabolites. EasF may, in fact, be the AdoMet:dimethylallyltryptophan N-methyltransferase, the enzyme that follows tryptophan dimethylallyltransferase (DMATS) in ergot alkaloid biosynthesis. Several other members of this family, including mug158 (meiotically up-regulated gene 158 protein) from Schizosaccharomyces pombe, contain an additional uncharacterized domain DUF323 (pfam03781). |
| >PRK13256 thiopurine S-methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=93.67 E-value=0.31 Score=45.62 Aligned_cols=117 Identities=9% Similarity=-0.013 Sum_probs=69.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcC---CCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERG---GGSS 126 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~---~~~~ 126 (366)
...+|++.|||.|.+... |.+. | .+|+..|+...--...|+...-... ...... ....
T Consensus 43 ~~~rvLvPgCGkg~D~~~--------LA~~-----G-----~~V~GvDlS~~Ai~~~~~e~~~~~~-~~~~~~~~~~~~~ 103 (226)
T PRK13256 43 DSSVCLIPMCGCSIDMLF--------FLSK-----G-----VKVIGIELSEKAVLSFFSQNTINYE-VIHGNDYKLYKGD 103 (226)
T ss_pred CCCeEEEeCCCChHHHHH--------HHhC-----C-----CcEEEEecCHHHHHHHHHHcCCCcc-eecccccceeccC
Confidence 357999999999999875 3232 2 7899999977655555553221000 000000 0001
Q ss_pred CceEEeccCCCcccccCC---CCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHH
Q 017747 127 PSVYIAGYPGSFYGRLFP---NNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFT 203 (366)
Q Consensus 127 ~~~f~~~vpgSFy~~lfp---~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~ 203 (366)
.-.+.+ |+|++--.+ -+.+|+++=..+|+=| |+ +....|+
T Consensus 104 ~i~~~~---gD~f~l~~~~~~~~~fD~VyDra~~~Al---pp-----------------------~~R~~Y~-------- 146 (226)
T PRK13256 104 DIEIYV---ADIFNLPKIANNLPVFDIWYDRGAYIAL---PN-----------------------DLRTNYA-------- 146 (226)
T ss_pred ceEEEE---ccCcCCCccccccCCcCeeeeehhHhcC---CH-----------------------HHHHHHH--------
Confidence 112333 577763211 2468888887777764 33 2455666
Q ss_pred HHHHHHHHHhccCceEEEEeec
Q 017747 204 LFLRSRSEELVVGGRMVLILLG 225 (366)
Q Consensus 204 ~FL~~Ra~EL~~GG~lvl~~~g 225 (366)
+.-++-|+|||.+++.++-
T Consensus 147 ---~~l~~lL~pgg~llll~~~ 165 (226)
T PRK13256 147 ---KMMLEVCSNNTQILLLVME 165 (226)
T ss_pred ---HHHHHHhCCCcEEEEEEEe
Confidence 4557889999999999873
|
|
| >PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes | Back alignment and domain information |
|---|
Probab=93.60 E-value=1.1 Score=41.55 Aligned_cols=165 Identities=21% Similarity=0.276 Sum_probs=89.6
Q ss_pred HHHHHHHHHHhhhhcCCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCch
Q 017747 33 KHITLEALQQLYLEIDPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPD 112 (366)
Q Consensus 33 ~~~l~~ai~~l~~~~~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~ 112 (366)
-|.|.+.+..+. .+..-+|++-|||.|..... |.++ | .+|+..|+...=-...|+.-..
T Consensus 23 ~p~L~~~~~~l~---~~~~~rvLvPgCG~g~D~~~--------La~~-----G-----~~VvGvDls~~Ai~~~~~e~~~ 81 (218)
T PF05724_consen 23 NPALVEYLDSLA---LKPGGRVLVPGCGKGYDMLW--------LAEQ-----G-----HDVVGVDLSPTAIEQAFEENNL 81 (218)
T ss_dssp THHHHHHHHHHT---TSTSEEEEETTTTTSCHHHH--------HHHT-----T-----EEEEEEES-HHHHHHHHHHCTT
T ss_pred CHHHHHHHHhcC---CCCCCeEEEeCCCChHHHHH--------HHHC-----C-----CeEEEEecCHHHHHHHHHHhcc
Confidence 355555544421 23457999999999998764 3332 2 8899999976544444332210
Q ss_pred hHHHHhhhcC---CCCCCceEEeccCCCcccccCCC--CcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCC
Q 017747 113 FHRQLRNERG---GGSSPSVYIAGYPGSFYGRLFPN--NSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSP 187 (366)
Q Consensus 113 ~~~~~~~~~~---~~~~~~~f~~~vpgSFy~~lfp~--~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~ 187 (366)
. .......+ .+ ...+ ..+-|+||+ +-|. +++|+++=-.+|+=| |+.
T Consensus 82 ~-~~~~~~~~~~~~~-~~~i--~~~~gDfF~-l~~~~~g~fD~iyDr~~l~Al---pp~--------------------- 132 (218)
T PF05724_consen 82 E-PTVTSVGGFKRYQ-AGRI--TIYCGDFFE-LPPEDVGKFDLIYDRTFLCAL---PPE--------------------- 132 (218)
T ss_dssp E-EECTTCTTEEEET-TSSE--EEEES-TTT-GGGSCHHSEEEEEECSSTTTS----GG---------------------
T ss_pred C-CCcccccceeeec-CCce--EEEEccccc-CChhhcCCceEEEEecccccC---CHH---------------------
Confidence 0 00000000 00 0111 122258877 2222 258999988888764 432
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCcc
Q 017747 188 SAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAH 267 (366)
Q Consensus 188 ~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P 267 (366)
..+.|++ .-++=|+|||++++.++-.+.. ...-|
T Consensus 133 --~R~~Ya~-----------~l~~ll~p~g~~lLi~l~~~~~---------------------------------~~~GP 166 (218)
T PF05724_consen 133 --MRERYAQ-----------QLASLLKPGGRGLLITLEYPQG---------------------------------EMEGP 166 (218)
T ss_dssp --GHHHHHH-----------HHHHCEEEEEEEEEEEEES-CS---------------------------------CSSSS
T ss_pred --HHHHHHH-----------HHHHHhCCCCcEEEEEEEcCCc---------------------------------CCCCc
Confidence 4566774 4578999999955554422110 01244
Q ss_pred ccCCCHHHHHHHHhhcCceEEeeEEEEe
Q 017747 268 FYAPSKEEIEGEVGREGSFKLDQLDMFQ 295 (366)
Q Consensus 268 ~y~ps~eEv~~~i~~~gsf~i~~~e~~~ 295 (366)
=|.-+.+||++++. .+ |+|+.++...
T Consensus 167 Pf~v~~~ev~~l~~-~~-f~i~~l~~~~ 192 (218)
T PF05724_consen 167 PFSVTEEEVRELFG-PG-FEIEELEEED 192 (218)
T ss_dssp S----HHHHHHHHT-TT-EEEEEEEEEE
T ss_pred CCCCCHHHHHHHhc-CC-cEEEEEeccc
Confidence 46668899999999 44 9998888743
|
Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B. |
| >PLN02672 methionine S-methyltransferase | Back alignment and domain information |
|---|
Probab=93.41 E-value=0.16 Score=57.35 Aligned_cols=41 Identities=20% Similarity=0.318 Sum_probs=28.6
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHH
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVF 107 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf 107 (366)
..+|+|+|||+|..++. +.+. .|..+|+..|+...-.....
T Consensus 119 ~~~VLDlG~GSG~Iai~--------La~~--------~~~~~v~avDis~~Al~~A~ 159 (1082)
T PLN02672 119 DKTVAELGCGNGWISIA--------IAEK--------WLPSKVYGLDINPRAVKVAW 159 (1082)
T ss_pred CCEEEEEecchHHHHHH--------HHHH--------CCCCEEEEEECCHHHHHHHH
Confidence 35899999999999985 3332 13368999999765444433
|
|
| >PRK13168 rumA 23S rRNA m(5)U1939 methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=93.37 E-value=0.15 Score=52.35 Aligned_cols=34 Identities=18% Similarity=0.048 Sum_probs=24.3
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCc
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTND 102 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~ND 102 (366)
..+|+|+|||+|..|+.+ .+. ..+|+.-|.....
T Consensus 298 ~~~VLDlgcGtG~~sl~l--------a~~----------~~~V~gvD~s~~a 331 (443)
T PRK13168 298 GDRVLDLFCGLGNFTLPL--------ARQ----------AAEVVGVEGVEAM 331 (443)
T ss_pred CCEEEEEeccCCHHHHHH--------HHh----------CCEEEEEeCCHHH
Confidence 468999999999988753 221 1568888876543
|
|
| >KOG3191 consensus Predicted N6-DNA-methyltransferase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=93.11 E-value=0.8 Score=41.58 Aligned_cols=145 Identities=17% Similarity=0.158 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHHhhhhcCCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhC
Q 017747 31 TVKHITLEALQQLYLEIDPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKAL 110 (366)
Q Consensus 31 ~~~~~l~~ai~~l~~~~~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l 110 (366)
.+++.||+...++... .+.-.+|+|||||--|-.+.+.+ + |.+..+..|+-.- .+-.++
T Consensus 27 lLlDaLekd~~eL~~~---~~~i~lEIG~GSGvvstfL~~~i------------~---~~~~~latDiNp~---A~~~Tl 85 (209)
T KOG3191|consen 27 LLLDALEKDAAELKGH---NPEICLEIGCGSGVVSTFLASVI------------G---PQALYLATDINPE---ALEATL 85 (209)
T ss_pred HHHHHHHHHHHHHhhc---CceeEEEecCCcchHHHHHHHhc------------C---CCceEEEecCCHH---HHHHHH
Confidence 3677777777766432 36778999999999886654444 2 3477778887321 111111
Q ss_pred chhHHHHhhhcCCCCCCceEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHH
Q 017747 111 PDFHRQLRNERGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAV 190 (366)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v 190 (366)
. ....+ .+-+-.|-.|+..-|-+ +++|+..=+ |+-+.....+. | ....
T Consensus 86 ~-----TA~~n------~~~~~~V~tdl~~~l~~-~~VDvLvfN---------PPYVpt~~~~i---~--------~~~i 133 (209)
T KOG3191|consen 86 E-----TARCN------RVHIDVVRTDLLSGLRN-ESVDVLVFN---------PPYVPTSDEEI---G--------DEGI 133 (209)
T ss_pred H-----HHHhc------CCccceeehhHHhhhcc-CCccEEEEC---------CCcCcCCcccc---h--------hHHH
Confidence 1 01111 12223344466666655 888876532 44332211100 0 0113
Q ss_pred HHHHH--HHHHHHHHHHHHHHHHHhccCceEEEEeecCCC
Q 017747 191 SKAYF--KQFQEDFTLFLRSRSEELVVGGRMVLILLGRIG 228 (366)
Q Consensus 191 ~~ay~--~Q~~~D~~~FL~~Ra~EL~~GG~lvl~~~g~~~ 228 (366)
..+|+ +--+.=..+||..--.-|.|-|.+.+..+-++.
T Consensus 134 ~~a~aGG~~Gr~v~d~ll~~v~~iLSp~Gv~Ylv~~~~N~ 173 (209)
T KOG3191|consen 134 ASAWAGGKDGREVTDRLLPQVPDILSPRGVFYLVALRANK 173 (209)
T ss_pred HHHHhcCcchHHHHHHHHhhhhhhcCcCceEEeeehhhcC
Confidence 34454 444555667888888889999999999876654
|
|
| >KOG1499 consensus Protein arginine N-methyltransferase PRMT1 and related enzymes [Posttranslational modification, protein turnover, chaperones; Transcription; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=93.09 E-value=0.4 Score=47.42 Aligned_cols=105 Identities=22% Similarity=0.283 Sum_probs=64.4
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
+.-+|+|.|||+|-.|+.. .+. |. ..|+.-|- +... .....+.+.++. ..+
T Consensus 60 ~dK~VlDVGcGtGILS~F~--------akA-----GA----~~V~aVe~-----S~ia----~~a~~iv~~N~~---~~i 110 (346)
T KOG1499|consen 60 KDKTVLDVGCGTGILSMFA--------AKA-----GA----RKVYAVEA-----SSIA----DFARKIVKDNGL---EDV 110 (346)
T ss_pred CCCEEEEcCCCccHHHHHH--------HHh-----Cc----ceEEEEec-----hHHH----HHHHHHHHhcCc---cce
Confidence 4578999999999999751 111 31 45555542 2222 222223232222 222
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
+-.+.|.-.+-.+|-..+|++.|-|-=+||-. +.=+...|-+|
T Consensus 111 -i~vi~gkvEdi~LP~eKVDiIvSEWMGy~Ll~------------------------------------EsMldsVl~AR 153 (346)
T KOG1499|consen 111 -ITVIKGKVEDIELPVEKVDIIVSEWMGYFLLY------------------------------------ESMLDSVLYAR 153 (346)
T ss_pred -EEEeecceEEEecCccceeEEeehhhhHHHHH------------------------------------hhhhhhhhhhh
Confidence 33345566555688899999999887777643 12234457799
Q ss_pred HHHhccCceEE
Q 017747 210 SEELVVGGRMV 220 (366)
Q Consensus 210 a~EL~~GG~lv 220 (366)
-+=|+|||.++
T Consensus 154 dkwL~~~G~i~ 164 (346)
T KOG1499|consen 154 DKWLKEGGLIY 164 (346)
T ss_pred hhccCCCceEc
Confidence 99999999886
|
|
| >COG0220 Predicted S-adenosylmethionine-dependent methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.05 E-value=0.31 Score=45.69 Aligned_cols=114 Identities=22% Similarity=0.298 Sum_probs=69.2
Q ss_pred eEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceEE
Q 017747 52 INIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVYI 131 (366)
Q Consensus 52 ~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~ 131 (366)
-.++|+|||.|...+. +.. ..|+.-++.-+.-.+ .+-+.+.. .. +.+ ..|+.+
T Consensus 50 pi~lEIGfG~G~~l~~--------~A~--------~nP~~nfiGiEi~~~---~v~~~l~k----~~-~~~---l~Nlri 102 (227)
T COG0220 50 PIVLEIGFGMGEFLVE--------MAK--------KNPEKNFLGIEIRVP---GVAKALKK----IK-ELG---LKNLRL 102 (227)
T ss_pred cEEEEECCCCCHHHHH--------HHH--------HCCCCCEEEEEEehH---HHHHHHHH----HH-HcC---CCcEEE
Confidence 4789999999997653 222 357788888887543 22222211 11 111 224443
Q ss_pred e-ccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 017747 132 A-GYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRS 210 (366)
Q Consensus 132 ~-~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra 210 (366)
. .-.-.+.+.++|++|+|=++-++.=-| |+.-= +|.++. . ..||+.-+
T Consensus 103 ~~~DA~~~l~~~~~~~sl~~I~i~FPDPW----pKkRH-------~KRRl~----~----------------~~fl~~~a 151 (227)
T COG0220 103 LCGDAVEVLDYLIPDGSLDKIYINFPDPW----PKKRH-------HKRRLT----Q----------------PEFLKLYA 151 (227)
T ss_pred EcCCHHHHHHhcCCCCCeeEEEEECCCCC----CCccc-------cccccC----C----------------HHHHHHHH
Confidence 3 222344567778889999999887777 33110 222221 1 24677889
Q ss_pred HHhccCceEEEEe
Q 017747 211 EELVVGGRMVLIL 223 (366)
Q Consensus 211 ~EL~~GG~lvl~~ 223 (366)
+-|+|||.+.+.+
T Consensus 152 ~~Lk~gG~l~~aT 164 (227)
T COG0220 152 RKLKPGGVLHFAT 164 (227)
T ss_pred HHccCCCEEEEEe
Confidence 9999999999986
|
|
| >PF11968 DUF3321: Putative methyltransferase (DUF3321); InterPro: IPR021867 This family is conserved in fungi and is annotated as being a nucleolar protein | Back alignment and domain information |
|---|
Probab=92.82 E-value=0.49 Score=43.93 Aligned_cols=95 Identities=23% Similarity=0.324 Sum_probs=66.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
..++++|+||=+..|... ..+.+.|..-||-+. .+.|
T Consensus 51 ~~lrlLEVGals~~N~~s-------------------~~~~fdvt~IDLns~------------------------~~~I 87 (219)
T PF11968_consen 51 PKLRLLEVGALSTDNACS-------------------TSGWFDVTRIDLNSQ------------------------HPGI 87 (219)
T ss_pred ccceEEeecccCCCCccc-------------------ccCceeeEEeecCCC------------------------CCCc
Confidence 459999999999988752 123488999999653 1122
Q ss_pred EEeccCCCcccccCC---CCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFP---NNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 130 f~~~vpgSFy~~lfp---~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
.= -+|.++.+| ++++|++..|..|.+ +|.+.. +| .-|
T Consensus 88 ~q----qDFm~rplp~~~~e~FdvIs~SLVLNf---VP~p~~--------RG-------------------------~Ml 127 (219)
T PF11968_consen 88 LQ----QDFMERPLPKNESEKFDVISLSLVLNF---VPDPKQ--------RG-------------------------EML 127 (219)
T ss_pred ee----eccccCCCCCCcccceeEEEEEEEEee---CCCHHH--------HH-------------------------HHH
Confidence 22 288898876 678999999999988 454220 11 124
Q ss_pred HHHHHHhccCce-----EEEEeecCC
Q 017747 207 RSRSEELVVGGR-----MVLILLGRI 227 (366)
Q Consensus 207 ~~Ra~EL~~GG~-----lvl~~~g~~ 227 (366)
+.-.+=|+|+|. |+++++-.+
T Consensus 128 ~r~~~fL~~~g~~~~~~LFlVlP~~C 153 (219)
T PF11968_consen 128 RRAHKFLKPPGLSLFPSLFLVLPLPC 153 (219)
T ss_pred HHHHHHhCCCCccCcceEEEEeCchH
Confidence 566778999999 999886543
|
|
| >PLN02781 Probable caffeoyl-CoA O-methyltransferase | Back alignment and domain information |
|---|
Probab=92.56 E-value=0.61 Score=43.69 Aligned_cols=36 Identities=14% Similarity=0.168 Sum_probs=25.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPT 100 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~ 100 (366)
++-+|+|+||++|.-++.+...+ ++..+++..|...
T Consensus 68 ~~~~vLEiGt~~G~s~l~la~~~---------------~~~g~v~tiD~d~ 103 (234)
T PLN02781 68 NAKNTLEIGVFTGYSLLTTALAL---------------PEDGRITAIDIDK 103 (234)
T ss_pred CCCEEEEecCcccHHHHHHHHhC---------------CCCCEEEEEECCH
Confidence 46899999999999887532211 2346888888864
|
|
| >KOG1500 consensus Protein arginine N-methyltransferase CARM1 [Posttranslational modification, protein turnover, chaperones; Transcription] | Back alignment and domain information |
|---|
Probab=92.49 E-value=0.46 Score=46.90 Aligned_cols=69 Identities=14% Similarity=0.175 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHH---------------HHHHHHHHcCccchhhhcc
Q 017747 199 QEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLS---------------RSLAILVSQGEIEKEKLVA 263 (366)
Q Consensus 199 ~~D~~~FL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~---------------~al~~mv~eG~i~~e~~d~ 263 (366)
++=+..+|.+| +=|+|.|.|+=++ |+-.-.|.+.+.-+ .|... ..|..-+-+|.+.+--+|.
T Consensus 259 ERMLEsYl~Ar-k~l~P~GkMfPT~-gdiHlAPFsDE~Ly-~E~~nkAnFWyQq~fyGVdLt~L~g~a~~eYFrQPvVDt 335 (517)
T KOG1500|consen 259 ERMLESYLHAR-KWLKPNGKMFPTV-GDIHLAPFSDEQLY-VEQFNKANFWYQQNFYGVDLTPLYGSAHQEYFRQPVVDT 335 (517)
T ss_pred HHHHHHHHHHH-hhcCCCCcccCcc-cceeecccchHHHH-HHHHhhhhhhhhhccccccchhhhhhhhhhhhccccccc
Confidence 35577888999 9999999998664 44333343332211 12111 1222223345566666777
Q ss_pred cCccccC
Q 017747 264 YHAHFYA 270 (366)
Q Consensus 264 f~~P~y~ 270 (366)
|.+.+..
T Consensus 336 FD~Rilm 342 (517)
T KOG1500|consen 336 FDIRILM 342 (517)
T ss_pred cccceee
Confidence 7666553
|
|
| >PRK00274 ksgA 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein; Reviewed | Back alignment and domain information |
|---|
Probab=92.37 E-value=0.052 Score=51.97 Aligned_cols=53 Identities=17% Similarity=0.182 Sum_probs=33.3
Q ss_pred eeccCCCCCcchHHHhhHHHHHHHHHHHHHHHHHHHHhhhhcCCCceEEEeecCCCCcchHHH
Q 017747 6 LFHMAGGTGPTSYARNSSLQKKASDTVKHITLEALQQLYLEIDPKTINIADLGCSSGPNTLAI 68 (366)
Q Consensus 6 ~l~M~gg~g~~sY~~nS~~Q~~~~~~~~~~l~~ai~~l~~~~~~~~~~IaDlGCs~G~ns~~~ 68 (366)
.|.|.|=.-..+|.+|-..+..+++.+...+. .....+|+|+|||+|..|..+
T Consensus 8 ~l~~~~~~~~k~~gq~fl~~~~i~~~i~~~l~----------~~~~~~VLEiG~G~G~lt~~L 60 (272)
T PRK00274 8 LLERYGHRAKKSLGQNFLIDENILDKIVDAAG----------PQPGDNVLEIGPGLGALTEPL 60 (272)
T ss_pred HHHHcCCCCCcccCcCcCCCHHHHHHHHHhcC----------CCCcCeEEEeCCCccHHHHHH
Confidence 34444444455677766666666654443321 123468999999999999753
|
|
| >PRK10611 chemotaxis methyltransferase CheR; Provisional | Back alignment and domain information |
|---|
Probab=92.16 E-value=0.44 Score=46.21 Aligned_cols=49 Identities=14% Similarity=0.240 Sum_probs=28.9
Q ss_pred CceEEEeecCCCCcc--hHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHh
Q 017747 50 KTINIADLGCSSGPN--TLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFK 108 (366)
Q Consensus 50 ~~~~IaDlGCs~G~n--s~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~ 108 (366)
.+++|...|||||-= |+.+ .+.+.. +.....++|+..|+..+--...-+
T Consensus 115 ~~irIWSAgCStGEEpYSlAm------ll~e~~----~~~~~~~~I~atDIs~~aL~~Ar~ 165 (287)
T PRK10611 115 GEYRVWSAAASTGEEPYSIAM------TLADTL----GTAPGRWKVFASDIDTEVLEKARS 165 (287)
T ss_pred CCEEEEEccccCCHHHHHHHH------HHHHhh----cccCCCcEEEEEECCHHHHHHHHh
Confidence 469999999999953 3321 122221 111124899999997654444333
|
|
| >COG1352 CheR Methylase of chemotaxis methyl-accepting proteins [Cell motility and secretion / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=91.98 E-value=1.7 Score=41.78 Aligned_cols=44 Identities=14% Similarity=0.183 Sum_probs=27.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPT 100 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~ 100 (366)
.+++|--.|||||-=.--+.-. +.+.... .....++++..|+..
T Consensus 96 ~~irIWSaaCStGEEpYSiAm~----l~e~~~~---~~~~~~~I~AtDId~ 139 (268)
T COG1352 96 RPIRIWSAACSTGEEPYSLAML----LLEALGK---LAGFRVKILATDIDL 139 (268)
T ss_pred CceEEEecCcCCCccHHHHHHH----HHHHhcc---ccCCceEEEEEECCH
Confidence 5899999999999644322222 2222111 123359999999943
|
|
| >PF10294 Methyltransf_16: Putative methyltransferase; InterPro: IPR019410 There are a number of unidentified genes that have a high probability of coding for methyltransferases | Back alignment and domain information |
|---|
Probab=91.76 E-value=0.4 Score=42.69 Aligned_cols=36 Identities=19% Similarity=0.190 Sum_probs=23.2
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCC
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPT 100 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~ 100 (366)
....+|+|||||+|--++.+... .....|++.|++.
T Consensus 44 ~~~~~VLELGaG~Gl~gi~~a~~----------------~~~~~Vv~TD~~~ 79 (173)
T PF10294_consen 44 FRGKRVLELGAGTGLPGIAAAKL----------------FGAARVVLTDYNE 79 (173)
T ss_dssp TTTSEEEETT-TTSHHHHHHHHT-----------------T-SEEEEEE-S-
T ss_pred cCCceEEEECCccchhHHHHHhc----------------cCCceEEEeccch
Confidence 34689999999999888753211 0127899999875
|
They make up approximately 0.6-1.6% of the genes in the yeast, human, mouse, Drosophila melanogaster, Caenorhabditis elegans, Arabidopsis thaliana, and Escherichia coli genomes []. This entry represents putative nicotinamide N-methyltransferases involved in rDNA silencing and in lifespan determination. ; PDB: 3BZB_A. |
| >PF13679 Methyltransf_32: Methyltransferase domain | Back alignment and domain information |
|---|
Probab=91.48 E-value=0.45 Score=40.82 Aligned_cols=57 Identities=14% Similarity=0.201 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHhhhhcCCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCC
Q 017747 30 DTVKHITLEALQQLYLEIDPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPT 100 (366)
Q Consensus 30 ~~~~~~l~~ai~~l~~~~~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~ 100 (366)
+++..++...++.. .....+.+|+|+|||.|+.|+.+...+ .. ..+..+|+.-|.-.
T Consensus 7 ~~~~~~i~~~~~~~--~~~~~~~~vvD~GsG~GyLs~~La~~l--------~~----~~~~~~v~~iD~~~ 63 (141)
T PF13679_consen 7 ERMAELIDSLCDSV--GESKRCITVVDLGSGKGYLSRALAHLL--------CN----SSPNLRVLGIDCNE 63 (141)
T ss_pred HHHHHHHHHHHHHh--hccCCCCEEEEeCCChhHHHHHHHHHH--------Hh----cCCCCeEEEEECCc
Confidence 34444555544422 112457999999999999998643311 11 12458888888743
|
|
| >KOG2899 consensus Predicted methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.47 E-value=1.1 Score=42.55 Aligned_cols=23 Identities=30% Similarity=0.431 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHhccCceEEEE
Q 017747 200 EDFTLFLRSRSEELVVGGRMVLI 222 (366)
Q Consensus 200 ~D~~~FL~~Ra~EL~~GG~lvl~ 222 (366)
..+.+||+.-++-|.|||+||+.
T Consensus 186 ~GL~~ff~kis~ll~pgGiLvvE 208 (288)
T KOG2899|consen 186 DGLRRFFRKISSLLHPGGILVVE 208 (288)
T ss_pred HHHHHHHHHHHHhhCcCcEEEEc
Confidence 46889999999999999999986
|
|
| >KOG2904 consensus Predicted methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.42 E-value=1.7 Score=41.97 Aligned_cols=131 Identities=18% Similarity=0.247 Sum_probs=71.6
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceE
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVY 130 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 130 (366)
.-.|+|+|||+|.-|+.++..+ |.-.++..|+...- .+....+.+.+. . .+.+-
T Consensus 149 ~~~ildlgtGSGaIslsll~~L----------------~~~~v~AiD~S~~A----i~La~eN~qr~~----l--~g~i~ 202 (328)
T KOG2904|consen 149 HTHILDLGTGSGAISLSLLHGL----------------PQCTVTAIDVSKAA----IKLAKENAQRLK----L--SGRIE 202 (328)
T ss_pred cceEEEecCCccHHHHHHHhcC----------------CCceEEEEeccHHH----HHHHHHHHHHHh----h--cCceE
Confidence 4479999999999998643322 34778888876421 111111111111 1 11222
Q ss_pred Ee--ccCCCccccc-CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHH--------HH
Q 017747 131 IA--GYPGSFYGRL-FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQ--------FQ 199 (366)
Q Consensus 131 ~~--~vpgSFy~~l-fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q--------~~ 199 (366)
+. -.-++-|... .+.+.+|+..|+ |+-+.++. |.+- .++| ..|..- -.
T Consensus 203 v~~~~me~d~~~~~~l~~~~~dllvsN---------PPYI~~dD----~~~l-------~~eV-~~yEp~lALdGg~eG~ 261 (328)
T KOG2904|consen 203 VIHNIMESDASDEHPLLEGKIDLLVSN---------PPYIRKDD----NRQL-------KPEV-RLYEPKLALDGGLEGY 261 (328)
T ss_pred EEecccccccccccccccCceeEEecC---------CCcccccc----hhhc-------Cchh-eecCchhhhccccchh
Confidence 21 1124555555 788999999886 55443321 1100 0001 111111 12
Q ss_pred HHHHHHHHHHHHHhccCceEEEEeecCCC
Q 017747 200 EDFTLFLRSRSEELVVGGRMVLILLGRIG 228 (366)
Q Consensus 200 ~D~~~FL~~Ra~EL~~GG~lvl~~~g~~~ 228 (366)
.-+..|+..-.+-|+|||.++|.+.++..
T Consensus 262 ~~~~~~~~~a~R~Lq~gg~~~le~~~~~~ 290 (328)
T KOG2904|consen 262 DNLVHYWLLATRMLQPGGFEQLELVERKE 290 (328)
T ss_pred HHHHHHHHhhHhhcccCCeEEEEeccccc
Confidence 23556777779999999999999998854
|
|
| >PHA03412 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=91.32 E-value=0.17 Score=47.78 Aligned_cols=72 Identities=13% Similarity=0.118 Sum_probs=42.5
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceE
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVY 130 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 130 (366)
..+|+|+|||+|..++.+...+ . ..+..+|+.-|+-.+.....-+.++ ..-+
T Consensus 50 ~grVLDlG~GSG~Lalala~~~--------~-----~~~~~~V~aVEID~~Al~~Ar~n~~---------------~~~~ 101 (241)
T PHA03412 50 SGSVVDLCAGIGGLSFAMVHMM--------M-----YAKPREIVCVELNHTYYKLGKRIVP---------------EATW 101 (241)
T ss_pred CCEEEEccChHHHHHHHHHHhc--------c-----cCCCcEEEEEECCHHHHHHHHhhcc---------------CCEE
Confidence 5799999999999887532222 1 1124789999986543333322221 1122
Q ss_pred EeccCCCcccccCCCCcccEEEcc
Q 017747 131 IAGYPGSFYGRLFPNNSLHFIHSS 154 (366)
Q Consensus 131 ~~~vpgSFy~~lfp~~s~~~~~S~ 154 (366)
+. ++|.... +++++|+++|+
T Consensus 102 ~~---~D~~~~~-~~~~FDlIIsN 121 (241)
T PHA03412 102 IN---ADALTTE-FDTLFDMAISN 121 (241)
T ss_pred EE---cchhccc-ccCCccEEEEC
Confidence 32 4664332 35689999986
|
|
| >PF01739 CheR: CheR methyltransferase, SAM binding domain; InterPro: IPR022642 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (AdoMet) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals | Back alignment and domain information |
|---|
Probab=91.28 E-value=1 Score=41.21 Aligned_cols=43 Identities=23% Similarity=0.267 Sum_probs=26.2
Q ss_pred CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEEE
Q 017747 143 FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLI 222 (366)
Q Consensus 143 fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~lvl~ 222 (366)
.+.+.+|++++-+.|-.++..- =.+.++.-++-|+|||.|++.
T Consensus 132 ~~~~~fD~I~CRNVlIYF~~~~-------------------------------------~~~vl~~l~~~L~pgG~L~lG 174 (196)
T PF01739_consen 132 PPFGRFDLIFCRNVLIYFDPET-------------------------------------QQRVLRRLHRSLKPGGYLFLG 174 (196)
T ss_dssp -----EEEEEE-SSGGGS-HHH-------------------------------------HHHHHHHHGGGEEEEEEEEE-
T ss_pred cccCCccEEEecCEEEEeCHHH-------------------------------------HHHHHHHHHHHcCCCCEEEEe
Confidence 4667889999998888765411 123356668999999999875
|
The reaction is catalysed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. Three classes of DNA Mtases transfer the methyl group from AdoMet to the target base to form either N-6-methyladenine, or N-4-methylcytosine, or C-5- methylcytosine. In C-5-cytosine Mtases, ten conserved motifs are arranged in the same order []. Motif I (a glycine-rich or closely related consensus sequence; FAGxGG in M.HhaI []), shared by other AdoMet-Mtases [], is part of the cofactor binding site and motif IV (PCQ) is part of the catalytic site. In contrast, sequence comparison among N-6-adenine and N-4-cytosine Mtases indicated two of the conserved segments [], although more conserved segments may be present. One of them corresponds to motif I in C-5-cytosine Mtases, and the other is named (D/N/S)PP(Y/F). Crystal structures are known for a number of Mtases [, , , ]. The cofactor binding sites are almost identical and the essential catalytic amino acids coincide. The comparable protein folding and the existence of equivalent amino acids in similar secondary and tertiary positions indicate that many (if not all) AdoMet-Mtases have a common catalytic domain structure. This permits tertiary structure prediction of other DNA, RNA, protein, and small-molecule AdoMet-Mtases from their amino acid sequences []. Flagellated bacteria swim towards favourable chemicals and away from deleterious ones. Sensing of chemoeffector gradients involves chemotaxis receptors, transmembrane (TM) proteins that detect stimuli through their periplasmic domains and transduce the signals via their cytoplasmic domains []. Signalling outputs from these receptors are influenced both by the binding of the chemoeffector ligand to their periplasmic domains and by methylation of specific glutamate residues on their cytoplasmic domains. Methylation is catalysed by CheR, an S-adenosylmethionine-dependent methyltransferase [], which reversibly methylates specific glutamate residues within a coiled coil region, to form gamma-glutamyl methyl ester residues [, ]. The structure of the Salmonella typhimurium chemotaxis receptor methyltransferase CheR, bound to S-adenosylhomocysteine, has been determined to a resolution of 2.0 A []. The structure reveals CheR to be a two-domain protein, with a smaller N-terminal helical domain linked via a single polypeptide connection to a larger C-terminal alpha/beta domain. The C-terminal domain has the characteristics of a nucleotide-binding fold, with an insertion of a small anti-parallel beta-sheet subdomain. The S-adenosylhomocysteine-binding site is formed mainly by the large domain, with contributions from residues within the N-terminal domain and the linker region []. CheR proteins are part of the chemotaxis signaling mechanism which methylates the chemotaxis receptor at specific glutamate residues. This entry refers to the C-terminal SAM-binding domain of the CherR-type MCP methyltransferases, which are found in bacteria, archaea and green plants. This entry is found in association with PF03705 from PFAM. ; PDB: 1AF7_A 1BC5_A. |
| >PRK14896 ksgA 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein; Provisional | Back alignment and domain information |
|---|
Probab=91.10 E-value=0.28 Score=46.57 Aligned_cols=18 Identities=17% Similarity=0.159 Sum_probs=15.7
Q ss_pred CceEEEeecCCCCcchHH
Q 017747 50 KTINIADLGCSSGPNTLA 67 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~ 67 (366)
+..+|+|+|||+|..|..
T Consensus 29 ~~~~VLEIG~G~G~lt~~ 46 (258)
T PRK14896 29 DGDPVLEIGPGKGALTDE 46 (258)
T ss_pred CcCeEEEEeCccCHHHHH
Confidence 357899999999999985
|
|
| >PRK11783 rlmL 23S rRNA m(2)G2445 methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=90.47 E-value=0.4 Score=52.12 Aligned_cols=116 Identities=15% Similarity=0.157 Sum_probs=63.3
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc-e
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS-V 129 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~-~ 129 (366)
.-+|+|+||++|..|+.+. .. | . .+|+..|+...-....-+.+ .. ++.. ..+ -
T Consensus 539 g~rVLDlf~gtG~~sl~aa--------~~-----G---a-~~V~~vD~s~~al~~a~~N~-------~~-ng~~-~~~v~ 592 (702)
T PRK11783 539 GKDFLNLFAYTGTASVHAA--------LG-----G---A-KSTTTVDMSNTYLEWAERNF-------AL-NGLS-GRQHR 592 (702)
T ss_pred CCeEEEcCCCCCHHHHHHH--------HC-----C---C-CEEEEEeCCHHHHHHHHHHH-------HH-hCCC-ccceE
Confidence 4689999999999998521 11 1 1 46899998654322222111 11 1110 012 2
Q ss_pred EEeccCCCccccc-CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRL-FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 130 f~~~vpgSFy~~l-fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
|+. ++.++-+ -..+++|++++. |+.+... +. ...+ ....+|+..++..
T Consensus 593 ~i~---~D~~~~l~~~~~~fDlIilD---------PP~f~~~------~~--------~~~~-----~~~~~~y~~l~~~ 641 (702)
T PRK11783 593 LIQ---ADCLAWLKEAREQFDLIFID---------PPTFSNS------KR--------MEDS-----FDVQRDHVALIKD 641 (702)
T ss_pred EEE---ccHHHHHHHcCCCcCEEEEC---------CCCCCCC------Cc--------cchh-----hhHHHHHHHHHHH
Confidence 333 3433211 015689999876 4444220 00 0001 1234567777777
Q ss_pred HHHHhccCceEEEEe
Q 017747 209 RSEELVVGGRMVLIL 223 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~ 223 (366)
-.+-|+|||.++++.
T Consensus 642 a~~lL~~gG~l~~~~ 656 (702)
T PRK11783 642 AKRLLRPGGTLYFSN 656 (702)
T ss_pred HHHHcCCCCEEEEEe
Confidence 788999999998875
|
|
| >PRK15128 23S rRNA m(5)C1962 methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=88.83 E-value=2.8 Score=42.50 Aligned_cols=27 Identities=11% Similarity=-0.001 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHHHHhccCceEEEEe
Q 017747 197 QFQEDFTLFLRSRSEELVVGGRMVLIL 223 (366)
Q Consensus 197 Q~~~D~~~FL~~Ra~EL~~GG~lvl~~ 223 (366)
...+++..++..-.+-|+|||.+++..
T Consensus 313 ~~~~~y~~l~~~a~~lLk~gG~lv~~s 339 (396)
T PRK15128 313 GACRGYKDINMLAIQLLNPGGILLTFS 339 (396)
T ss_pred HHHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 345677788888888999999999765
|
|
| >PRK11933 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF; Reviewed | Back alignment and domain information |
|---|
Probab=88.77 E-value=1.7 Score=45.11 Aligned_cols=132 Identities=15% Similarity=0.175 Sum_probs=66.9
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|++||.|.-|..+.+.+ + .+-.|+.||...+-...|-+.+.. .| ..++
T Consensus 113 pg~~VLD~CAAPGgKTt~la~~l------------~---~~g~lvA~D~~~~R~~~L~~nl~r--------~G---~~nv 166 (470)
T PRK11933 113 APQRVLDMAAAPGSKTTQIAALM------------N---NQGAIVANEYSASRVKVLHANISR--------CG---VSNV 166 (470)
T ss_pred CCCEEEEeCCCccHHHHHHHHHc------------C---CCCEEEEEeCCHHHHHHHHHHHHH--------cC---CCeE
Confidence 34799999999999997643222 1 125799999977655555443321 11 2233
Q ss_pred EEe-ccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIA-GYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 130 f~~-~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
-+. .-+..+ ...+| +.+|.++ =++||.-.. .+.|..--....++..+. +..+-=..+|..
T Consensus 167 ~v~~~D~~~~-~~~~~-~~fD~IL--------vDaPCSG~G----~~rk~p~~~~~~s~~~v~-----~l~~lQ~~iL~~ 227 (470)
T PRK11933 167 ALTHFDGRVF-GAALP-ETFDAIL--------LDAPCSGEG----TVRKDPDALKNWSPESNL-----EIAATQRELIES 227 (470)
T ss_pred EEEeCchhhh-hhhch-hhcCeEE--------EcCCCCCCc----ccccCHHHhhhCCHHHHH-----HHHHHHHHHHHH
Confidence 222 222222 12222 3466665 233443211 000000000001222222 222333557788
Q ss_pred HHHHhccCceEEEEeecC
Q 017747 209 RSEELVVGGRMVLILLGR 226 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~ 226 (366)
=++-|+|||+||-+++.-
T Consensus 228 A~~~LkpGG~LVYSTCT~ 245 (470)
T PRK11933 228 AFHALKPGGTLVYSTCTL 245 (470)
T ss_pred HHHHcCCCcEEEEECCCC
Confidence 888999999998887654
|
|
| >PF05219 DREV: DREV methyltransferase; InterPro: IPR007884 This family contains DREV protein homologues from several eukaryotes | Back alignment and domain information |
|---|
Probab=86.87 E-value=1.9 Score=41.15 Aligned_cols=18 Identities=33% Similarity=0.433 Sum_probs=15.6
Q ss_pred CceEEEeecCCCCcchHH
Q 017747 50 KTINIADLGCSSGPNTLA 67 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~ 67 (366)
+..+++|+|.|+|.-|..
T Consensus 94 ~~~~lLDlGAGdG~VT~~ 111 (265)
T PF05219_consen 94 KDKSLLDLGAGDGEVTER 111 (265)
T ss_pred cCCceEEecCCCcHHHHH
Confidence 457899999999999874
|
The function of this protein is unknown []. However, these proteins appear to be related to other methyltransferases. |
| >PLN02823 spermine synthase | Back alignment and domain information |
|---|
Probab=86.72 E-value=2.7 Score=41.66 Aligned_cols=18 Identities=17% Similarity=0.331 Sum_probs=15.0
Q ss_pred CCceEEEeecCCCCcchH
Q 017747 49 PKTINIADLGCSSGPNTL 66 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~ 66 (366)
+++.+|+.+|+|.|....
T Consensus 102 ~~pk~VLiiGgG~G~~~r 119 (336)
T PLN02823 102 PNPKTVFIMGGGEGSTAR 119 (336)
T ss_pred CCCCEEEEECCCchHHHH
Confidence 567899999999997654
|
|
| >TIGR00755 ksgA dimethyladenosine transferase | Back alignment and domain information |
|---|
Probab=86.51 E-value=0.69 Score=43.60 Aligned_cols=18 Identities=17% Similarity=0.135 Sum_probs=15.7
Q ss_pred CceEEEeecCCCCcchHH
Q 017747 50 KTINIADLGCSSGPNTLA 67 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~ 67 (366)
...+|+|+|||+|..|..
T Consensus 29 ~~~~VLEiG~G~G~lt~~ 46 (253)
T TIGR00755 29 EGDVVLEIGPGLGALTEP 46 (253)
T ss_pred CcCEEEEeCCCCCHHHHH
Confidence 457899999999999875
|
Alternate name: S-adenosylmethionine--6-N',N'-adenosyl (rRNA) dimethyltransferase |
| >PRK11727 23S rRNA mA1618 methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=86.18 E-value=1.7 Score=42.85 Aligned_cols=80 Identities=10% Similarity=0.162 Sum_probs=43.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|....++ .. ..+..+++..|+-..-....-+.+ ..+.+. ...+
T Consensus 114 ~~~~vLDIGtGag~I~~lL--------a~--------~~~~~~~~atDId~~Al~~A~~Nv-------~~Np~l--~~~I 168 (321)
T PRK11727 114 ANVRVLDIGVGANCIYPLI--------GV--------HEYGWRFVGSDIDPQALASAQAII-------SANPGL--NGAI 168 (321)
T ss_pred CCceEEEecCCccHHHHHH--------Hh--------hCCCCEEEEEeCCHHHHHHHHHHH-------HhccCC--cCcE
Confidence 4589999999999655432 11 123478999998432222111111 111011 1123
Q ss_pred --EEeccCCCccccc-CCCCcccEEEcc
Q 017747 130 --YIAGYPGSFYGRL-FPNNSLHFIHSS 154 (366)
Q Consensus 130 --f~~~vpgSFy~~l-fp~~s~~~~~S~ 154 (366)
.....++..+..+ .+.+.+|+++|+
T Consensus 169 ~~~~~~~~~~i~~~i~~~~~~fDlivcN 196 (321)
T PRK11727 169 RLRLQKDSKAIFKGIIHKNERFDATLCN 196 (321)
T ss_pred EEEEccchhhhhhcccccCCceEEEEeC
Confidence 2233445555554 467899999996
|
|
| >TIGR00478 tly hemolysin TlyA family protein | Back alignment and domain information |
|---|
Probab=85.64 E-value=0.71 Score=43.27 Aligned_cols=37 Identities=24% Similarity=0.192 Sum_probs=26.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCch
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDF 103 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDF 103 (366)
+..+|+|+|||+|..|..+ .+. | --+|+.-|...++.
T Consensus 75 ~~~~vlDiG~gtG~~t~~l--------~~~-----g----a~~v~avD~~~~~l 111 (228)
T TIGR00478 75 KNKIVLDVGSSTGGFTDCA--------LQK-----G----AKEVYGVDVGYNQL 111 (228)
T ss_pred CCCEEEEcccCCCHHHHHH--------HHc-----C----CCEEEEEeCCHHHH
Confidence 4568999999999999742 221 1 16799999987643
|
Hemolysins are exotoxins that attack blood cell membranes and cause cell rupture, often by forming a pore in the membrane. At least two members of this protein family have been characterized indirectly as pore-forming hemolysins, one from the spirochete Serpula (Treponema) hyodysenteriae and one from Mycobacterium tuberculosis. However, homology domains in this protein suggest methyltransferase activity (pfam01728) and RNA-binding activity (pfam01479). |
| >COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=85.39 E-value=6 Score=37.68 Aligned_cols=128 Identities=20% Similarity=0.286 Sum_probs=75.5
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHh-hCchhHHHHhhhcCCCCCCce
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFK-ALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~-~l~~~~~~~~~~~~~~~~~~~ 129 (366)
-.+|+|.|.|||..|..+...+ .|+-+|+--|.-. ||-...+ ++..+ +.+ ....
T Consensus 95 g~rVlEAGtGSG~lt~~La~~v---------------g~~G~v~tyE~r~-d~~k~A~~Nl~~~--------~l~-d~v~ 149 (256)
T COG2519 95 GSRVLEAGTGSGALTAYLARAV---------------GPEGHVTTYEIRE-DFAKTARENLSEF--------GLG-DRVT 149 (256)
T ss_pred CCEEEEcccCchHHHHHHHHhh---------------CCCceEEEEEecH-HHHHHHHHHHHHh--------ccc-cceE
Confidence 4899999999999998643333 2446777777654 5554432 22111 111 1111
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
+.. |+..+-.++. .+|.+|= ++|.+- . .|..-
T Consensus 150 ~~~---~Dv~~~~~~~-~vDav~L--------Dmp~PW---------------------~---------------~le~~ 181 (256)
T COG2519 150 LKL---GDVREGIDEE-DVDAVFL--------DLPDPW---------------------N---------------VLEHV 181 (256)
T ss_pred EEe---cccccccccc-ccCEEEE--------cCCChH---------------------H---------------HHHHH
Confidence 222 6777777766 7777762 334321 1 25677
Q ss_pred HHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccC
Q 017747 210 SEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYH 265 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~ 265 (366)
++.|+|||.+++-.+. .+.+...+..|-+.|..+.+..+...
T Consensus 182 ~~~Lkpgg~~~~y~P~--------------veQv~kt~~~l~~~g~~~ie~~E~l~ 223 (256)
T COG2519 182 SDALKPGGVVVVYSPT--------------VEQVEKTVEALRERGFVDIEAVETLV 223 (256)
T ss_pred HHHhCCCcEEEEEcCC--------------HHHHHHHHHHHHhcCccchhhheeee
Confidence 9999999999988633 34566666666556766665544433
|
|
| >PF09243 Rsm22: Mitochondrial small ribosomal subunit Rsm22; InterPro: IPR015324 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms | Back alignment and domain information |
|---|
Probab=85.30 E-value=3.4 Score=39.62 Aligned_cols=17 Identities=18% Similarity=0.429 Sum_probs=14.1
Q ss_pred CceEEEeecCCCCcchH
Q 017747 50 KTINIADLGCSSGPNTL 66 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~ 66 (366)
.|.+|+|+|||.|.-+.
T Consensus 33 ~P~~vLD~GsGpGta~w 49 (274)
T PF09243_consen 33 RPRSVLDFGSGPGTALW 49 (274)
T ss_pred CCceEEEecCChHHHHH
Confidence 57899999999997543
|
The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. Rsm22 has been identified as a mitochondrial small ribosomal subunit [] and is a methyltransferase. In Schizosaccharomyces pombe (Fission yeast), Rsm22 is tandemly fused to Cox11 (a factor required for copper insertion into cytochrome oxidase) and the two proteins are proteolytically cleaved after import into the mitochondria []. This entry consists of mitochondrial Rsm22 and homologous sequences from bacteria.; GO: 0008168 methyltransferase activity, 0006412 translation |
| >PRK03522 rumB 23S rRNA methyluridine methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=84.89 E-value=1.3 Score=43.24 Aligned_cols=33 Identities=15% Similarity=0.162 Sum_probs=24.2
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCC
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTN 101 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~N 101 (366)
+.+|+|+|||+|..++.+. +. ..+|+..|+...
T Consensus 174 ~~~VLDl~cG~G~~sl~la--------~~----------~~~V~gvD~s~~ 206 (315)
T PRK03522 174 PRSMWDLFCGVGGFGLHCA--------TP----------GMQLTGIEISAE 206 (315)
T ss_pred CCEEEEccCCCCHHHHHHH--------hc----------CCEEEEEeCCHH
Confidence 4789999999999987532 11 157888888643
|
|
| >PF07942 N2227: N2227-like protein; InterPro: IPR012901 This family features sequences that are similar to a region of hypothetical yeast gene product N2227 (P53934 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=84.66 E-value=11 Score=36.29 Aligned_cols=69 Identities=20% Similarity=0.310 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHH
Q 017747 199 QEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEG 278 (366)
Q Consensus 199 ~~D~~~FL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~ 278 (366)
+++.-.+|..-.+-||||| +...+|.-- |=++ ++ + + -+-...-.|.||+++
T Consensus 178 A~Ni~~Yi~tI~~lLkpgG--~WIN~GPLl---------yh~~-------~~---~-~-------~~~~sveLs~eEi~~ 228 (270)
T PF07942_consen 178 AENIIEYIETIEHLLKPGG--YWINFGPLL---------YHFE-------PM---S-I-------PNEMSVELSLEEIKE 228 (270)
T ss_pred hHHHHHHHHHHHHHhccCC--EEEecCCcc---------ccCC-------CC---C-C-------CCCcccCCCHHHHHH
Confidence 3566778889999999999 344444421 1001 00 0 0 001115578999999
Q ss_pred HHhhcCceEEeeEEE-Eeec
Q 017747 279 EVGREGSFKLDQLDM-FQVE 297 (366)
Q Consensus 279 ~i~~~gsf~i~~~e~-~~~~ 297 (366)
+++.-| |++.+-+. ....
T Consensus 229 l~~~~G-F~~~~~~~~i~~~ 247 (270)
T PF07942_consen 229 LIEKLG-FEIEKEESSILSG 247 (270)
T ss_pred HHHHCC-CEEEEEEEeeecC
Confidence 999999 99987766 4443
|
This is thought to be expressed during meiosis and may be involved in the defence response to stressful conditions []. |
| >COG2263 Predicted RNA methylase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=84.00 E-value=0.62 Score=42.42 Aligned_cols=17 Identities=24% Similarity=0.429 Sum_probs=14.8
Q ss_pred ceEEEeecCCCCcchHH
Q 017747 51 TINIADLGCSSGPNTLA 67 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~ 67 (366)
.-+|+|+|||||..++.
T Consensus 46 g~~V~DlG~GTG~La~g 62 (198)
T COG2263 46 GKTVLDLGAGTGILAIG 62 (198)
T ss_pred CCEEEEcCCCcCHHHHH
Confidence 45799999999999874
|
|
| >PTZ00338 dimethyladenosine transferase-like protein; Provisional | Back alignment and domain information |
|---|
Probab=82.28 E-value=1.6 Score=42.45 Aligned_cols=21 Identities=19% Similarity=0.327 Sum_probs=17.2
Q ss_pred CceEEEeecCCCCcchHHHHH
Q 017747 50 KTINIADLGCSSGPNTLAIIK 70 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~ 70 (366)
..-+|+|+|||+|..|..++.
T Consensus 36 ~~~~VLEIG~G~G~LT~~Ll~ 56 (294)
T PTZ00338 36 PTDTVLEIGPGTGNLTEKLLQ 56 (294)
T ss_pred CcCEEEEecCchHHHHHHHHH
Confidence 346899999999999986543
|
|
| >PF01234 NNMT_PNMT_TEMT: NNMT/PNMT/TEMT family; InterPro: IPR000940 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (AdoMet) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals | Back alignment and domain information |
|---|
Probab=81.62 E-value=2 Score=40.96 Aligned_cols=82 Identities=20% Similarity=0.235 Sum_probs=55.8
Q ss_pred CcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEEEeec
Q 017747 146 NSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLG 225 (366)
Q Consensus 146 ~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~lvl~~~g 225 (366)
...|.+.|+.||.=.++-+. .+.+=|++-+.-|||||.|++....
T Consensus 157 ~~~D~v~s~fcLE~a~~d~~-----------------------------------~y~~al~ni~~lLkpGG~Lil~~~l 201 (256)
T PF01234_consen 157 PKFDCVISSFCLESACKDLD-----------------------------------EYRRALRNISSLLKPGGHLILAGVL 201 (256)
T ss_dssp SSEEEEEEESSHHHH-SSHH-----------------------------------HHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred cchhhhhhhHHHHHHcCCHH-----------------------------------HHHHHHHHHHHHcCCCcEEEEEEEc
Confidence 35999999999987665322 2233456778999999999999875
Q ss_pred CCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEeeEE
Q 017747 226 RIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLD 292 (366)
Q Consensus 226 ~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~~~e 292 (366)
..+. |+ -| .-.+|...-+.+.|+++|+++| |.|...+
T Consensus 202 ~~t~--------Y~-------------vG--------~~~F~~l~l~ee~v~~al~~aG-~~i~~~~ 238 (256)
T PF01234_consen 202 GSTY--------YM-------------VG--------GHKFPCLPLNEEFVREALEEAG-FDIEDLE 238 (256)
T ss_dssp S-SE--------EE-------------ET--------TEEEE---B-HHHHHHHHHHTT-EEEEEEE
T ss_pred Ccee--------EE-------------EC--------CEecccccCCHHHHHHHHHHcC-CEEEecc
Confidence 5431 21 01 1247788889999999999999 9998877
|
The reaction is catalysed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. Three classes of DNA Mtases transfer the methyl group from AdoMet to the target base to form either N-6-methyladenine, or N-4-methylcytosine, or C-5- methylcytosine. In C-5-cytosine Mtases, ten conserved motifs are arranged in the same order []. Motif I (a glycine-rich or closely related consensus sequence; FAGxGG in M.HhaI []), shared by other AdoMet-Mtases [], is part of the cofactor binding site and motif IV (PCQ) is part of the catalytic site. In contrast, sequence comparison among N-6-adenine and N-4-cytosine Mtases indicated two of the conserved segments [], although more conserved segments may be present. One of them corresponds to motif I in C-5-cytosine Mtases, and the other is named (D/N/S)PP(Y/F). Crystal structures are known for a number of Mtases [, , , ]. The cofactor binding sites are almost identical and the essential catalytic amino acids coincide. The comparable protein folding and the existence of equivalent amino acids in similar secondary and tertiary positions indicate that many (if not all) AdoMet-Mtases have a common catalytic domain structure. This permits tertiary structure prediction of other DNA, RNA, protein, and small-molecule AdoMet-Mtases from their amino acid sequences []. Several cytoplasmic vertebrate methyltransferases are evolutionary related [], including nicotinamide N-methyltransferase (2.1.1.1 from EC) (NNMT); phenylethanolamine N-methyltransferase (2.1.1.28 from EC) (PNMT); and thioether S-methyltransferase (2.1.1.96 from EC) (TEMT). NNMT catalyzes the N-methylation of nicotinamide and other pyridines to form pyridinium ions. This activity is important for the biotransformation of many drugs and xenobiotic compounds. PNMT catalyzes the last step in catecholamine biosynthesis, the conversion of noradrenalin to adrenalin; and TEMT catalyzes the methylation of dimethyl sulphide into trimethylsulphonium. These three enzymes use S-adenosyl-L-methionine as the methyl donor. They are proteins of 30 to 32 kDa.; GO: 0008168 methyltransferase activity; PDB: 2IIP_C 3ROD_A 2OBF_A 3HCA_B 2ONY_B 3KR1_A 2OPB_B 3KQP_B 2AN4_B 3KQM_A .... |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 366 | ||||
| 1m6e_X | 359 | Crystal Structure Of Salicylic Acid Carboxyl Methyl | 4e-80 | ||
| 2efj_A | 384 | The Structure Of 1,7 Dimethylxanthine Methyltransfe | 4e-64 | ||
| 2eg5_A | 372 | The Structure Of Xanthosine Methyltransferase Lengt | 1e-63 | ||
| 3b5i_A | 374 | Crystal Structure Of Indole-3-Acetic Acid Methyltra | 4e-49 |
| >pdb|1M6E|X Chain X, Crystal Structure Of Salicylic Acid Carboxyl Methyltransferase (Samt) Length = 359 | Back alignment and structure |
|
| >pdb|2EFJ|A Chain A, The Structure Of 1,7 Dimethylxanthine Methyltransferase Length = 384 | Back alignment and structure |
|
| >pdb|2EG5|A Chain A, The Structure Of Xanthosine Methyltransferase Length = 372 | Back alignment and structure |
|
| >pdb|3B5I|A Chain A, Crystal Structure Of Indole-3-Acetic Acid Methyltransferase Length = 374 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35 Length = 359 | Back alignment and structure |
|---|
Score = 332 bits (852), Expect = e-113
Identities = 153/373 (41%), Positives = 221/373 (59%), Gaps = 25/373 (6%)
Query: 1 MDVEKLFHMAGGTGPTSYARNSSLQKKASDTVKHITLEALQQLYL-EIDPKTINIADLGC 59
MDV ++ HM GG G SYA NS +Q++ K IT A+ LY + + IADLGC
Sbjct: 1 MDVRQVLHMKGGAGENSYAMNSFIQRQVISITKPITEAAITALYSGDTVTTRLAIADLGC 60
Query: 60 SSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRN 119
SSGPN L + + ++TVE +++ + +PE+ +LNDLP NDFN++F++LP
Sbjct: 61 SSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIE------ 114
Query: 120 ERGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGN 179
+I G PGSFYGRLFP N+LHFIHSS SL WLS+VP + + NKGN
Sbjct: 115 ---NDVDGVCFINGVPGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIES------NKGN 165
Query: 180 IYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFF 239
IY++ + P +V AY+KQFQED LFLR R++E+V GGRMVL +LGR D
Sbjct: 166 IYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILGRRSEDRASTECCLI 225
Query: 240 WELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQL-------D 292
W+LL+ +L +VS+G IE+EK+ ++ Y PS E+E E+ +EGSF +D +
Sbjct: 226 WQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIEASEIYWS 285
Query: 293 MFQVERQGHDRGESYGSAVARTVRAIQESTIIHHFGIGEGVLDNLFEIYGRLVDEEMAKE 352
+ G E G VAR +RA+ E ++ HF GE +++++F Y L+ E M+KE
Sbjct: 286 SCTKDGDGGGSVEEEGYNVARCMRAVAEPLLLDHF--GEAIIEDVFHRYKLLIIERMSKE 343
Query: 353 EIKPLTFVLLLRK 365
+ K + ++ L +
Sbjct: 344 KTKFINVIVSLIR 356
|
| >3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana} Length = 374 | Back alignment and structure |
|---|
Score = 329 bits (843), Expect = e-111
Identities = 119/373 (31%), Positives = 182/373 (48%), Gaps = 14/373 (3%)
Query: 1 MDVEKLFHMAGGTGPTSYARNSSLQKKASDTVKHITLEALQQLYLEID--PKTINIADLG 58
M +E+L M GG G SYA NS Q + ++ H+ E L+ ++L P DLG
Sbjct: 1 MKLERLLSMKGGKGQDSYANNSLAQAMHARSMLHLLEETLENVHLNSSASPPPFTAVDLG 60
Query: 59 CSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLR 118
CSSG NT+ II V+ + +P PEF + +DLP+NDFN++F+ LP
Sbjct: 61 CSSGANTVHIIDFIVKHISKRFDAAGIDP-PEFTAFFSDLPSNDFNTLFQLLPPLVSNTC 119
Query: 119 NERG--GGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESIN 176
E + S ++AG PGSFY RLFP ++ F HS+ SLHWLS+VP ++ + + N
Sbjct: 120 MEECLAADGNRSYFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYN 179
Query: 177 KGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGN 236
+G ++I + + AY +QFQ D FLR+R+ E+ GG M L+ LGR D D+G
Sbjct: 180 RGRVFIHGAGE-KTTTAYKRQFQADLAEFLRARAAEVKRGGAMFLVCLGRTSVDPTDQGG 238
Query: 237 --SFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLDMF 294
F + LV +G + EK ++ YAPS ++ + V GSF +D+L ++
Sbjct: 239 AGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIPVYAPSLQDFKEVVDANGSFAIDKLVVY 298
Query: 295 QV----ERQGHDRGESYGSAVARTVRAIQESTIIHHFGIGEGVLDNLFEIYGRLVDEEMA 350
+ D G A A + R++ + H GE + + LF
Sbjct: 299 KGGSPLVVNEPDDASEVGRAFASSCRSVAGVLVEAHI--GEELSNKLFSRVESRATSHAK 356
Query: 351 KEEIKPLTFVLLL 363
+ F ++
Sbjct: 357 DVLVNLQFFHIVA 369
|
| >2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A* Length = 384 | Back alignment and structure |
|---|
Score = 326 bits (835), Expect = e-110
Identities = 141/385 (36%), Positives = 203/385 (52%), Gaps = 28/385 (7%)
Query: 1 MDVEKLFHMAGGTGPTSYARNSSLQKKASDTVKHITLEALQQLY---LEIDPKTINIADL 57
M+++++ HM GG G TSYA+NSS K + + +Q+L L K + DL
Sbjct: 1 MELQEVLHMNGGEGDTSYAKNSSYNLFLIRV-KPVLEQCIQELLRANLPNINKCFKVGDL 59
Query: 58 GCSSGPNTLAIIKDFVQTVEMTSREILQN-PAPEFHFYLNDLPTNDFNSVFKALPDFHRQ 116
GC+SGPNT + ++D VQ+++ +E P +LNDL NDFNSVFK LP F+R
Sbjct: 60 GCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRN 119
Query: 117 LRNERGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESIN 176
L E G S I PGSFY RLFP S+HF+HS LHWLS+VP L E+G S+N
Sbjct: 120 LEKENGRKI-GSCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVN 178
Query: 177 KGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGN 236
KG IY S++S + KAY QF +DFT FLR SEEL+ GRM+L + + +
Sbjct: 179 KGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHSEELISRGRMLLTFICKEDEFD----H 234
Query: 237 SFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLDMFQV 296
+LL S+ LV +G +E+EKL +++ YAPS EE++ V EGSF++ L+ F
Sbjct: 235 PNSMDLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEILYLETFNA 294
Query: 297 ERQGHDRGE----------------SYGSAVARTVRAIQESTIIHHFGIGEGVLDNLFEI 340
+ + + VA VR+I E + HF GE +L +L
Sbjct: 295 PYDAGFSIDDDYQGRSHSPVSCDEHARAAHVASVVRSIYEPILASHF--GEAILPDLSHR 352
Query: 341 YGRLVDEEMAKEEIKPLTFVLLLRK 365
+ + + + + ++ L K
Sbjct: 353 IAKNAAKVLRSGKGFYDSVIISLAK 377
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.8 bits (110), Expect = 9e-06
Identities = 64/417 (15%), Positives = 115/417 (27%), Gaps = 161/417 (38%)
Query: 9 MAGGTGPTSYA----RNSSLQKKASDTVKHIT----------LEALQQLYLEIDPKTINI 54
+ G+G T A + +Q K + + LE LQ+L +IDP +
Sbjct: 158 V-LGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSR 216
Query: 55 ADLGCS-------------------SGPNTLAIIKDFVQTVE------------MTSREI 83
+D + N L ++ + VQ + +T+R
Sbjct: 217 SDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLN-VQNAKAWNAFNLSCKILLTTRFK 275
Query: 84 ----LQNPAPEFHFYLNDLP---TND---------FNSVFKALPDFHRQLRNERGGGSSP 127
+ A H L+ T D + + LP R++ ++P
Sbjct: 276 QVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLP---REVL-----TTNP 327
Query: 128 SVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSP 187
S + N H +++ I ESS
Sbjct: 328 RRL------SIIAESIRD---GLATWDNWKH-------VNCDKLTTII--------ESSL 363
Query: 188 SAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFW------- 240
+ + A +++ + ++F S I P + S W
Sbjct: 364 NVLEPAEYRKMFDRLSVFPPS-----------AHI------PTIL---LSLIWFDVIKSD 403
Query: 241 ------ELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLDMF 294
+L SL + Q KE ++ Y K ++E E S +D +
Sbjct: 404 VMVVVNKLHKYSL--VEKQP---KESTISIP-SIYLELKVKLENEYALHRSI----VDHY 453
Query: 295 QVERQ--------GHDRGESYGSAVARTVRAIQESTIIHHF-GIGEGVLDNLFE-IY 341
+ + + Y S I HH I LF ++
Sbjct: 454 NIPKTFDSDDLIPPYLDQYFY-------------SHIGHHLKNIEHPERMTLFRMVF 497
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 366 | |||
| 2efj_A | 384 | 3,7-dimethylxanthine methyltransferase; SAM-depend | 100.0 | |
| 1m6e_X | 359 | S-adenosyl-L-methionnine:salicylic acid carboxyl m | 100.0 | |
| 3b5i_A | 374 | S-adenosyl-L-methionine:salicylic acid carboxyl me | 100.0 | |
| 3ccf_A | 279 | Cyclopropane-fatty-acyl-phospholipid synthase; YP_ | 99.58 | |
| 2p35_A | 259 | Trans-aconitate 2-methyltransferase; SAM dependent | 99.56 | |
| 2yqz_A | 263 | Hypothetical protein TTHA0223; RNA methyltransfera | 99.42 | |
| 3dtn_A | 234 | Putative methyltransferase MM_2633; structural gen | 99.36 | |
| 3bus_A | 273 | REBM, methyltransferase; rebeccamycin synthesis; H | 99.23 | |
| 3ujc_A | 266 | Phosphoethanolamine N-methyltransferase; parasite; | 99.21 | |
| 3hem_A | 302 | Cyclopropane-fatty-acyl-phospholipid synthase 2; p | 99.19 | |
| 4gek_A | 261 | TRNA (CMO5U34)-methyltransferase; structural genom | 99.15 | |
| 3hnr_A | 220 | Probable methyltransferase BT9727_4108; structural | 99.15 | |
| 3sm3_A | 235 | SAM-dependent methyltransferases; NESG, structural | 99.13 | |
| 2aot_A | 292 | HMT, histamine N-methyltransferase; classic methyl | 99.12 | |
| 3f4k_A | 257 | Putative methyltransferase; structural genomics, P | 99.09 | |
| 3dli_A | 240 | Methyltransferase; PSI-II, NYSGXRC, structural gen | 99.08 | |
| 3h2b_A | 203 | SAM-dependent methyltransferase; alpha-beta protei | 99.07 | |
| 4htf_A | 285 | S-adenosylmethionine-dependent methyltransferase; | 99.07 | |
| 1kpg_A | 287 | CFA synthase;, cyclopropane-fatty-acyl-phospholipi | 99.06 | |
| 2o57_A | 297 | Putative sarcosine dimethylglycine methyltransfera | 99.05 | |
| 4hg2_A | 257 | Methyltransferase type 11; structural genomics, PS | 99.05 | |
| 3kkz_A | 267 | Uncharacterized protein Q5LES9; putative methyltra | 99.03 | |
| 3mgg_A | 276 | Methyltransferase; NYSGXRC, PSI-II, protein struct | 99.02 | |
| 3ou2_A | 218 | SAM-dependent methyltransferase; O-methyltransfera | 99.01 | |
| 3ege_A | 261 | Putative methyltransferase from antibiotic biosyn | 98.99 | |
| 1vl5_A | 260 | Unknown conserved protein BH2331; putative methylt | 98.98 | |
| 1xxl_A | 239 | YCGJ protein; structural genomics, protein structu | 98.95 | |
| 3lcc_A | 235 | Putative methyl chloride transferase; halide methy | 98.92 | |
| 1nkv_A | 256 | Hypothetical protein YJHP; structural genomics, PS | 98.92 | |
| 2p7i_A | 250 | Hypothetical protein; putative methyltransferase, | 98.92 | |
| 3l8d_A | 242 | Methyltransferase; structural genomics, PSI, nysgr | 98.91 | |
| 1xtp_A | 254 | LMAJ004091AAA; SGPP, structural genomics, PSI, pro | 98.9 | |
| 2qe6_A | 274 | Uncharacterized protein TFU_2867; putative methylt | 98.9 | |
| 1pjz_A | 203 | Thiopurine S-methyltransferase; polymorphism, S-ad | 98.9 | |
| 3bkx_A | 275 | SAM-dependent methyltransferase; YP_807781.1, cycl | 98.9 | |
| 3dh0_A | 219 | SAM dependent methyltransferase; cystal structure, | 98.89 | |
| 2fk8_A | 318 | Methoxy mycolic acid synthase 4; S-adenosylmethion | 98.88 | |
| 3dlc_A | 219 | Putative S-adenosyl-L-methionine-dependent methylt | 98.88 | |
| 3bgv_A | 313 | MRNA CAP guanine-N7 methyltransferase; alternative | 98.87 | |
| 2g72_A | 289 | Phenylethanolamine N-methyltransferase; HET: SAM F | 98.84 | |
| 3e23_A | 211 | Uncharacterized protein RPA2492; alpha-beta protei | 98.84 | |
| 1ri5_A | 298 | MRNA capping enzyme; methyltransferase, M7G, messe | 98.83 | |
| 3g5t_A | 299 | Trans-aconitate 3-methyltransferase; structural ge | 98.82 | |
| 3vc1_A | 312 | Geranyl diphosphate 2-C-methyltransferase; rossman | 98.81 | |
| 2a14_A | 263 | Indolethylamine N-methyltransferase; SGC,INMT, str | 98.81 | |
| 1y8c_A | 246 | S-adenosylmethionine-dependent methyltransferase; | 98.79 | |
| 3g5l_A | 253 | Putative S-adenosylmethionine dependent methyltran | 98.79 | |
| 3g2m_A | 299 | PCZA361.24; SAM-dependent methyltransferase, glyco | 98.79 | |
| 3giw_A | 277 | Protein of unknown function DUF574; rossmann-fold | 98.79 | |
| 3i53_A | 332 | O-methyltransferase; CO-complex, rossmann-like fol | 98.77 | |
| 3pfg_A | 263 | N-methyltransferase; N,N-dimethyltransferase, SAM | 98.77 | |
| 3reo_A | 368 | (ISO)eugenol O-methyltransferase; directed evoluti | 98.77 | |
| 3ocj_A | 305 | Putative exported protein; structural genomics, PS | 98.76 | |
| 2ex4_A | 241 | Adrenal gland protein AD-003; methyltransferase, s | 98.76 | |
| 3lst_A | 348 | CALO1 methyltransferase; calicheamicin, enediyne, | 98.75 | |
| 2gb4_A | 252 | Thiopurine S-methyltransferase; 18204406, thiopuri | 98.74 | |
| 3cc8_A | 230 | Putative methyltransferase; structural genomics, j | 98.74 | |
| 3e8s_A | 227 | Putative SAM dependent methyltransferase; NP_74470 | 98.74 | |
| 3p9c_A | 364 | Caffeic acid O-methyltransferase; S-adenosylmethio | 98.73 | |
| 1vlm_A | 219 | SAM-dependent methyltransferase; possible histamin | 98.73 | |
| 2ip2_A | 334 | Probable phenazine-specific methyltransferase; pyo | 98.72 | |
| 3dp7_A | 363 | SAM-dependent methyltransferase; structural genomi | 98.7 | |
| 2gs9_A | 211 | Hypothetical protein TT1324; methyl transferase, s | 98.7 | |
| 3gwz_A | 369 | MMCR; methyltransferase, mitomycin, S-adenosyl met | 98.69 | |
| 2kw5_A | 202 | SLR1183 protein; structural genomics, northeast st | 98.66 | |
| 2i62_A | 265 | Nicotinamide N-methyltransferase; structural genom | 98.66 | |
| 4fsd_A | 383 | Arsenic methyltransferase; rossmann fold; 1.75A {C | 98.64 | |
| 2vdw_A | 302 | Vaccinia virus capping enzyme D1 subunit; nucleoti | 98.63 | |
| 3jwg_A | 219 | HEN1, methyltransferase type 12; 1.90A {Clostridiu | 98.63 | |
| 3cgg_A | 195 | SAM-dependent methyltransferase; NP_600671.1, meth | 98.63 | |
| 3jwh_A | 217 | HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena | 98.63 | |
| 3bkw_A | 243 | MLL3908 protein, S-adenosylmethionine dependent me | 98.63 | |
| 3mcz_A | 352 | O-methyltransferase; adomet_mtases, S-adenosylmeth | 98.62 | |
| 4a6d_A | 353 | Hydroxyindole O-methyltransferase; melatonin, circ | 98.61 | |
| 3ofk_A | 216 | Nodulation protein S; NODS, N-methyltransferase, S | 98.58 | |
| 4e2x_A | 416 | TCAB9; kijanose, tetronitrose, tetradeoxy sugar, s | 98.58 | |
| 2r3s_A | 335 | Uncharacterized protein; methyltransferase domain, | 98.58 | |
| 1x19_A | 359 | CRTF-related protein; methyltransferase, bacterioc | 98.55 | |
| 1fp1_D | 372 | Isoliquiritigenin 2'-O-methyltransferase; protein- | 98.54 | |
| 2avn_A | 260 | Ubiquinone/menaquinone biosynthesis methyltransfe | 98.54 | |
| 1qzz_A | 374 | RDMB, aclacinomycin-10-hydroxylase; anthracycline, | 98.54 | |
| 3ggd_A | 245 | SAM-dependent methyltransferase; YP_325210.1, stru | 98.51 | |
| 2zfu_A | 215 | Nucleomethylin, cerebral protein 1; nucleolar prot | 98.5 | |
| 1tw3_A | 360 | COMT, carminomycin 4-O-methyltransferase; anthracy | 98.49 | |
| 3thr_A | 293 | Glycine N-methyltransferase; GNMT, folate, methylt | 98.49 | |
| 3gu3_A | 284 | Methyltransferase; alpha-beta protein, structural | 98.48 | |
| 3i9f_A | 170 | Putative type 11 methyltransferase; structural gen | 98.47 | |
| 3g07_A | 292 | 7SK snRNA methylphosphate capping enzyme; structur | 98.46 | |
| 2xvm_A | 199 | Tellurite resistance protein TEHB; antibiotic resi | 98.44 | |
| 3m70_A | 286 | Tellurite resistance protein TEHB homolog; structu | 98.43 | |
| 2p8j_A | 209 | S-adenosylmethionine-dependent methyltransferase; | 98.39 | |
| 1fp2_A | 352 | Isoflavone O-methyltransferase; protein-product co | 98.38 | |
| 3bxo_A | 239 | N,N-dimethyltransferase; desosamine, sugar, carboh | 98.38 | |
| 1zg3_A | 358 | Isoflavanone 4'-O-methyltransferase; rossman fold, | 98.35 | |
| 3opn_A | 232 | Putative hemolysin; structural genomics, PSI-2, pr | 98.34 | |
| 4df3_A | 233 | Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; | 98.33 | |
| 1yzh_A | 214 | TRNA (guanine-N(7)-)-methyltransferase; alpha-beta | 98.33 | |
| 1ve3_A | 227 | Hypothetical protein PH0226; dimer, riken structur | 98.29 | |
| 2ld4_A | 176 | Anamorsin; methyltransferase-like fold, alpha/beta | 98.27 | |
| 3q87_B | 170 | N6 adenine specific DNA methylase; SAM-methyltrans | 98.27 | |
| 3grz_A | 205 | L11 mtase, ribosomal protein L11 methyltransferase | 98.25 | |
| 1wzn_A | 252 | SAM-dependent methyltransferase; structural genomi | 98.24 | |
| 3dxy_A | 218 | TRNA (guanine-N(7)-)-methyltransferase; rossmann f | 98.22 | |
| 3mq2_A | 218 | 16S rRNA methyltransferase; methyltranferase, ribo | 98.21 | |
| 3iv6_A | 261 | Putative Zn-dependent alcohol dehydrogenase; alpha | 98.19 | |
| 2pxx_A | 215 | Uncharacterized protein MGC2408; structural genomi | 98.17 | |
| 3m33_A | 226 | Uncharacterized protein; structural genomics, PSI- | 98.14 | |
| 2plw_A | 201 | Ribosomal RNA methyltransferase, putative; malaria | 98.13 | |
| 1ej0_A | 180 | FTSJ; methyltransferase, adoMet, adenosyl methioni | 98.11 | |
| 3hp7_A | 291 | Hemolysin, putative; structural genomics, APC64019 | 98.11 | |
| 3d2l_A | 243 | SAM-dependent methyltransferase; ZP_00538691.1, st | 98.1 | |
| 3dmg_A | 381 | Probable ribosomal RNA small subunit methyltransf; | 98.06 | |
| 1zx0_A | 236 | Guanidinoacetate N-methyltransferase; structural g | 98.04 | |
| 3mti_A | 185 | RRNA methylase; SAM-dependent, PSI, MCSG, structur | 98.03 | |
| 3lbf_A | 210 | Protein-L-isoaspartate O-methyltransferase; modifi | 98.03 | |
| 3sso_A | 419 | Methyltransferase; macrolide, natural product, ros | 98.02 | |
| 3e05_A | 204 | Precorrin-6Y C5,15-methyltransferase (decarboxyla; | 98.02 | |
| 3hm2_A | 178 | Precorrin-6Y C5,15-methyltransferase; alpha-beta-s | 98.0 | |
| 3p2e_A | 225 | 16S rRNA methylase; methyltransferase, transferase | 97.97 | |
| 2fca_A | 213 | TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bac | 97.97 | |
| 3eey_A | 197 | Putative rRNA methylase; rRNA methylation, S-adeno | 97.95 | |
| 1dus_A | 194 | MJ0882; hypothetical protein, methanococcus jannas | 97.94 | |
| 3q7e_A | 349 | Protein arginine N-methyltransferase 1; HET: SAH; | 97.92 | |
| 3r0q_C | 376 | Probable protein arginine N-methyltransferase 4.2; | 97.91 | |
| 1af7_A | 274 | Chemotaxis receptor methyltransferase CHER; chemot | 97.91 | |
| 2nxc_A | 254 | L11 mtase, ribosomal protein L11 methyltransferase | 97.89 | |
| 1p91_A | 269 | Ribosomal RNA large subunit methyltransferase A; R | 97.88 | |
| 3ckk_A | 235 | TRNA (guanine-N(7)-)-methyltransferase; mettl1, S- | 97.88 | |
| 2nyu_A | 196 | Putative ribosomal RNA methyltransferase 2; SAM, s | 97.87 | |
| 2yxe_A | 215 | Protein-L-isoaspartate O-methyltransferase; rossma | 97.86 | |
| 4dzr_A | 215 | Protein-(glutamine-N5) methyltransferase, release | 97.85 | |
| 3id6_C | 232 | Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; | 97.84 | |
| 2b3t_A | 276 | Protein methyltransferase HEMK; translation termin | 97.84 | |
| 1vbf_A | 231 | 231AA long hypothetical protein-L-isoaspartate O- | 97.84 | |
| 3fzg_A | 200 | 16S rRNA methylase; methyltransferase, plasmid, tr | 97.82 | |
| 3orh_A | 236 | Guanidinoacetate N-methyltransferase; structura ge | 97.82 | |
| 4dcm_A | 375 | Ribosomal RNA large subunit methyltransferase G; 2 | 97.81 | |
| 3p9n_A | 189 | Possible methyltransferase (methylase); RV2966C, a | 97.8 | |
| 2pjd_A | 343 | Ribosomal RNA small subunit methyltransferase C; g | 97.75 | |
| 2pbf_A | 227 | Protein-L-isoaspartate O-methyltransferase beta-A | 97.74 | |
| 1nt2_A | 210 | Fibrillarin-like PRE-rRNA processing protein; adeM | 97.74 | |
| 3bwc_A | 304 | Spermidine synthase; SAM, SGPP, structura genomics | 97.69 | |
| 1i1n_A | 226 | Protein-L-isoaspartate O-methyltransferase; S-aden | 97.68 | |
| 1dl5_A | 317 | Protein-L-isoaspartate O-methyltransferase; isoasp | 97.66 | |
| 3gdh_A | 241 | Trimethylguanosine synthase homolog; M7G, CAP, dim | 97.66 | |
| 1jsx_A | 207 | Glucose-inhibited division protein B; methyltransf | 97.65 | |
| 1r18_A | 227 | Protein-L-isoaspartate(D-aspartate)-O-methyltrans; | 97.65 | |
| 1o9g_A | 250 | RRNA methyltransferase; antibiotic resistance, Se- | 97.64 | |
| 3adn_A | 294 | Spermidine synthase; aminopropyltransferase, polya | 97.62 | |
| 3lpm_A | 259 | Putative methyltransferase; structural genomics, p | 97.62 | |
| 3uwp_A | 438 | Histone-lysine N-methyltransferase, H3 lysine-79; | 97.62 | |
| 2fyt_A | 340 | Protein arginine N-methyltransferase 3; structural | 97.61 | |
| 3evz_A | 230 | Methyltransferase; NYSGXRC, NEW YORK SGX research | 97.61 | |
| 2yxd_A | 183 | Probable cobalt-precorrin-6Y C(15)-methyltransfer | 97.6 | |
| 2ozv_A | 260 | Hypothetical protein ATU0636; structural genomics, | 97.59 | |
| 3mb5_A | 255 | SAM-dependent methyltransferase; RNA methyltransfe | 97.58 | |
| 3htx_A | 950 | HEN1; HEN1, small RNA methyltransferase, protein-R | 97.58 | |
| 1jg1_A | 235 | PIMT;, protein-L-isoaspartate O-methyltransferase; | 97.57 | |
| 3gjy_A | 317 | Spermidine synthase; APC62791, structural genomics | 97.56 | |
| 1xdz_A | 240 | Methyltransferase GIDB; MCSG, protein structure in | 97.56 | |
| 1g6q_1 | 328 | HnRNP arginine N-methyltransferase; SAM-binding do | 97.52 | |
| 1ixk_A | 315 | Methyltransferase; open beta sheet; 1.90A {Pyrococ | 97.52 | |
| 1uir_A | 314 | Polyamine aminopropyltransferase; spermidien synth | 97.5 | |
| 2ipx_A | 233 | RRNA 2'-O-methyltransferase fibrillarin; FBL, stru | 97.5 | |
| 1fbn_A | 230 | MJ fibrillarin homologue; MJ proteins, ribosomal R | 97.49 | |
| 2b25_A | 336 | Hypothetical protein; structural genomics, methyl | 97.47 | |
| 3tfw_A | 248 | Putative O-methyltransferase; PSI-biology, nysgrc, | 97.46 | |
| 2ift_A | 201 | Putative methylase HI0767; NESG, Y767_haein, struc | 97.45 | |
| 2h00_A | 254 | Methyltransferase 10 domain containing protein; st | 97.43 | |
| 1i9g_A | 280 | Hypothetical protein RV2118C; mtase, adoMet, cryst | 97.42 | |
| 1yb2_A | 275 | Hypothetical protein TA0852; structural genomics, | 97.41 | |
| 3dou_A | 191 | Ribosomal RNA large subunit methyltransferase J; c | 97.41 | |
| 3u81_A | 221 | Catechol O-methyltransferase; neurotransmitter deg | 97.41 | |
| 1ws6_A | 171 | Methyltransferase; structural genomics, riken stru | 97.38 | |
| 3fpf_A | 298 | Mtnas, putative uncharacterized protein; thermonic | 97.37 | |
| 1inl_A | 296 | Spermidine synthase; beta-barrel, rossman fold, st | 97.35 | |
| 2bm8_A | 236 | Cephalosporin hydroxylase CMCI; cephamycin biosynt | 97.35 | |
| 3njr_A | 204 | Precorrin-6Y methylase; methyltransferase, decarbo | 97.35 | |
| 1xj5_A | 334 | Spermidine synthase 1; structural genomics, protei | 97.35 | |
| 2gpy_A | 233 | O-methyltransferase; structural genomics, PSI, pro | 97.35 | |
| 2esr_A | 177 | Methyltransferase; structural genomics, hypothetic | 97.34 | |
| 1u2z_A | 433 | Histone-lysine N-methyltransferase, H3 lysine-79 s | 97.32 | |
| 4hc4_A | 376 | Protein arginine N-methyltransferase 6; HRMT1L6, S | 97.31 | |
| 1g8a_A | 227 | Fibrillarin-like PRE-rRNA processing protein; rRNA | 97.31 | |
| 1o54_A | 277 | SAM-dependent O-methyltransferase; TM0748, structu | 97.3 | |
| 2fpo_A | 202 | Methylase YHHF; structural genomics, putative meth | 97.3 | |
| 2pwy_A | 258 | TRNA (adenine-N(1)-)-methyltransferase; mtase, ado | 97.29 | |
| 1l3i_A | 192 | Precorrin-6Y methyltransferase/putative decarboxyl | 97.28 | |
| 3r3h_A | 242 | O-methyltransferase, SAM-dependent; structural gen | 97.28 | |
| 2xyq_A | 290 | Putative 2'-O-methyl transferase; transferase-vira | 97.27 | |
| 3g89_A | 249 | Ribosomal RNA small subunit methyltransferase G; 1 | 97.25 | |
| 1iy9_A | 275 | Spermidine synthase; rossmann fold, structural gen | 97.25 | |
| 3dr5_A | 221 | Putative O-methyltransferase; Q8NRD3, CGL1119, PF0 | 97.24 | |
| 2o07_A | 304 | Spermidine synthase; structural genomics, structur | 97.21 | |
| 2frx_A | 479 | Hypothetical protein YEBU; rossmann-type S-adenosy | 97.21 | |
| 2wa2_A | 276 | Non-structural protein 5; transferase, S-adenosyl- | 97.2 | |
| 2vdv_E | 246 | TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl | 97.18 | |
| 2i7c_A | 283 | Spermidine synthase; transferase, structural genom | 97.18 | |
| 2oxt_A | 265 | Nucleoside-2'-O-methyltransferase; flavivirus, vir | 97.15 | |
| 3duw_A | 223 | OMT, O-methyltransferase, putative; alternating of | 97.15 | |
| 1sqg_A | 429 | SUN protein, FMU protein; rossmann-fold, mixed bet | 97.08 | |
| 2pt6_A | 321 | Spermidine synthase; transferase, structural genom | 97.08 | |
| 3tma_A | 354 | Methyltransferase; thump domain; 2.05A {Thermus th | 97.08 | |
| 2b2c_A | 314 | Spermidine synthase; beta-alpha, transferase; 2.50 | 97.07 | |
| 2y1w_A | 348 | Histone-arginine methyltransferase CARM1; histone | 97.06 | |
| 3ajd_A | 274 | Putative methyltransferase MJ0026; tRNA, M5C, ross | 97.05 | |
| 3tr6_A | 225 | O-methyltransferase; cellular processes; HET: SAH; | 97.03 | |
| 2p41_A | 305 | Type II methyltransferase; vizier, viral enzymes i | 97.01 | |
| 2hnk_A | 239 | SAM-dependent O-methyltransferase; modified rossma | 97.01 | |
| 3m6w_A | 464 | RRNA methylase; rRNA methyltransferase, 5-methylcy | 96.99 | |
| 1mjf_A | 281 | Spermidine synthase; spermidine synthetase, struct | 96.98 | |
| 3bzb_A | 281 | Uncharacterized protein; RED ALGA, protein structu | 96.96 | |
| 2fhp_A | 187 | Methylase, putative; alpha-beta-alpha sandwich, st | 96.93 | |
| 2frn_A | 278 | Hypothetical protein PH0793; structural genomics, | 96.88 | |
| 3ntv_A | 232 | MW1564 protein; rossmann fold, putative methyltran | 96.88 | |
| 3lcv_B | 281 | Sisomicin-gentamicin resistance methylase SGM; ant | 96.86 | |
| 2igt_A | 332 | SAM dependent methyltransferase; alpha-beta sandwi | 96.78 | |
| 2avd_A | 229 | Catechol-O-methyltransferase; structural genomics, | 96.78 | |
| 3frh_A | 253 | 16S rRNA methylase; methyltransferase domain, heli | 96.75 | |
| 2yxl_A | 450 | PH0851 protein, 450AA long hypothetical FMU protei | 96.74 | |
| 1sui_A | 247 | Caffeoyl-COA O-methyltransferase; rossmann fold, p | 96.71 | |
| 2ih2_A | 421 | Modification methylase TAQI; DNA, DNA methyltransf | 96.65 | |
| 2yvl_A | 248 | TRMI protein, hypothetical protein; tRNA, methyltr | 96.64 | |
| 1wxx_A | 382 | TT1595, hypothetical protein TTHA1280; thermus the | 96.6 | |
| 3m4x_A | 456 | NOL1/NOP2/SUN family protein; mtase domain, PUA do | 96.55 | |
| 4dmg_A | 393 | Putative uncharacterized protein TTHA1493; rRNA, m | 96.53 | |
| 3c3p_A | 210 | Methyltransferase; NP_951602.1, structural genomic | 96.48 | |
| 3a27_A | 272 | TYW2, uncharacterized protein MJ1557; wybutosine m | 96.45 | |
| 3cbg_A | 232 | O-methyltransferase; cyanobacterium; HET: SAH FER | 96.4 | |
| 3c3y_A | 237 | Pfomt, O-methyltransferase; plant secondary metabo | 96.38 | |
| 2f8l_A | 344 | Hypothetical protein LMO1582; structural genomics, | 96.36 | |
| 3b3j_A | 480 | Histone-arginine methyltransferase CARM1; protein | 96.3 | |
| 2cmg_A | 262 | Spermidine synthase; transferase, putrescine amino | 96.29 | |
| 1nv8_A | 284 | HEMK protein; class I adoMet-dependent methyltrans | 95.83 | |
| 1zq9_A | 285 | Probable dimethyladenosine transferase; SGC, struc | 95.76 | |
| 2as0_A | 396 | Hypothetical protein PH1915; RNA methyltransferase | 95.71 | |
| 3gru_A | 295 | Dimethyladenosine transferase; rossman fold, ribos | 95.71 | |
| 3tm4_A | 373 | TRNA (guanine N2-)-methyltransferase TRM14; rossma | 95.6 | |
| 1ne2_A | 200 | Hypothetical protein TA1320; structural genomics, | 95.59 | |
| 2b78_A | 385 | Hypothetical protein SMU.776; structure genomics, | 95.49 | |
| 3gnl_A | 244 | Uncharacterized protein, DUF633, LMOF2365_1472; st | 95.48 | |
| 3lec_A | 230 | NADB-rossmann superfamily protein; PSI, MCSG, stru | 95.43 | |
| 3kr9_A | 225 | SAM-dependent methyltransferase; class I rossmann- | 95.42 | |
| 4gqb_A | 637 | Protein arginine N-methyltransferase 5; TIM barrel | 94.92 | |
| 1qam_A | 244 | ERMC' methyltransferase; rRNA methyltransferase ER | 94.88 | |
| 2h1r_A | 299 | Dimethyladenosine transferase, putative; SGC toron | 94.76 | |
| 3evf_A | 277 | RNA-directed RNA polymerase NS5; NS5 methyltransfe | 94.65 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 94.47 | |
| 2okc_A | 445 | Type I restriction enzyme stysji M protein; NP_813 | 94.36 | |
| 2qm3_A | 373 | Predicted methyltransferase; putative methyltransf | 94.28 | |
| 3v97_A | 703 | Ribosomal RNA large subunit methyltransferase L; Y | 94.23 | |
| 1wy7_A | 207 | Hypothetical protein PH1948; seven-stranded beta s | 94.22 | |
| 2yx1_A | 336 | Hypothetical protein MJ0883; methyl transferase, t | 94.02 | |
| 3s1s_A | 878 | Restriction endonuclease bpusi; PD--(D/E)XK cataly | 94.01 | |
| 3tqs_A | 255 | Ribosomal RNA small subunit methyltransferase A; p | 93.69 | |
| 2qy6_A | 257 | UPF0209 protein YFCK; structural genomics, unknown | 93.68 | |
| 3fut_A | 271 | Dimethyladenosine transferase; methyltransferase, | 93.56 | |
| 3khk_A | 544 | Type I restriction-modification system methylation | 93.43 | |
| 3c0k_A | 396 | UPF0064 protein YCCW; PUA domain, adoMet dependent | 93.4 | |
| 2jjq_A | 425 | Uncharacterized RNA methyltransferase pyrab10780; | 93.12 | |
| 3lkd_A | 542 | Type I restriction-modification system methyltrans | 92.65 | |
| 3k6r_A | 278 | Putative transferase PH0793; structural genomics, | 92.47 | |
| 1yub_A | 245 | Ermam, rRNA methyltransferase; MLS antibiotics; NM | 92.3 | |
| 2qfm_A | 364 | Spermine synthase; spermidine aminopropyltransfera | 91.16 | |
| 3gcz_A | 282 | Polyprotein; flavivirus, RNA capping, methyltransf | 91.0 | |
| 1uwv_A | 433 | 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA m | 90.84 | |
| 2b9e_A | 309 | NOL1/NOP2/SUN domain family, member 5 isoform 2; m | 90.59 | |
| 2dul_A | 378 | N(2),N(2)-dimethylguanosine tRNA methyltransferas; | 90.09 | |
| 4auk_A | 375 | Ribosomal RNA large subunit methyltransferase M; Y | 90.01 | |
| 3uzu_A | 279 | Ribosomal RNA small subunit methyltransferase A; s | 89.82 | |
| 3eld_A | 300 | Methyltransferase; flavivirus, RNA capping, guanyl | 89.07 | |
| 2ar0_A | 541 | M.ecoki, type I restriction enzyme ecoki M protein | 88.64 | |
| 3ldu_A | 385 | Putative methylase; structural genomics, PSI-2, pr | 87.0 | |
| 3ftd_A | 249 | Dimethyladenosine transferase; KSGA, rossmann-like | 86.35 | |
| 3k0b_A | 393 | Predicted N6-adenine-specific DNA methylase; methy | 83.8 | |
| 3ldg_A | 384 | Putative uncharacterized protein SMU.472; YPSC, me | 83.4 | |
| 3ua3_A | 745 | Protein arginine N-methyltransferase 5; TIM-barrel | 81.55 | |
| 2k4m_A | 153 | TR8_protein, UPF0146 protein MTH_1000; alpha+beta, | 80.97 |
| >2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-98 Score=743.35 Aligned_cols=355 Identities=40% Similarity=0.645 Sum_probs=316.2
Q ss_pred CCccceeccCCCCCcchHHHhhHHHHHHHHHHHHHHHHHHHHhhhhcCCC---ceEEEeecCCCCcchHHHHHHHHHHHH
Q 017747 1 MDVEKLFHMAGGTGPTSYARNSSLQKKASDTVKHITLEALQQLYLEIDPK---TINIADLGCSSGPNTLAIIKDFVQTVE 77 (366)
Q Consensus 1 ~~~~~~l~M~gg~g~~sY~~nS~~Q~~~~~~~~~~l~~ai~~l~~~~~~~---~~~IaDlGCs~G~ns~~~~~~ii~~l~ 77 (366)
|+++++|||+||+|++||++||. |++++..++|++++||++++....++ +++|||||||+|+||+++++.||++++
T Consensus 1 m~~~~~~~M~gg~G~~sY~~nS~-Q~~~~~~~~~~~~~ai~~l~~~~~~~~~~~~~IaDlGCssG~NT~~~v~~ii~~i~ 79 (384)
T 2efj_A 1 MELQEVLHMNGGEGDTSYAKNSS-YNLFLIRVKPVLEQCIQELLRANLPNINKCFKVGDLGCASGPNTFSTVRDIVQSID 79 (384)
T ss_dssp --CTTTCCCCC----CCHHHHCC-TTTTHHHHHHHHHHHHHHHHHTTCTTTTTEEEEEEETCCSSHHHHHHHHHHHHHHT
T ss_pred CCcccccccCCCCChhhHHHhHH-HHHHHHHHHHHHHHHHHHhhhcccCCcCCceEEEecCCCCCchHHHHHHHHHHHHH
Confidence 88999999999999999999999 99999999999999999998865566 899999999999999999999999999
Q ss_pred HHhhh--hhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceEEeccCCCcccccCCCCcccEEEccc
Q 017747 78 MTSRE--ILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSN 155 (366)
Q Consensus 78 ~~~~~--~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~~lfp~~s~~~~~S~~ 155 (366)
++|.. . +.++|++||++||||+||||+||++||.+.+++.+..|.+ .++||++|||||||+||||++|+|++||++
T Consensus 80 ~~~~~~~~-~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~-~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~ 157 (384)
T 2efj_A 80 KVGQEKKN-ELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRK-IGSCLIGAMPGSFYSRLFPEESMHFLHSCY 157 (384)
T ss_dssp CC-----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCC-TTSEEEEECCSCTTSCCSCTTCEEEEEEES
T ss_pred HHhhhccc-CCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCC-CCceEEEecchhhhhccCCCCceEEEEecc
Confidence 98754 3 4467899999999999999999999999998887766654 678999999999999999999999999999
Q ss_pred ccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEEEeecCCCC--CCCC
Q 017747 156 SLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGP--DHVD 233 (366)
Q Consensus 156 alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~lvl~~~g~~~~--~~~~ 233 (366)
||||||++|+.+.++.+++||||+|||+.++|++|.+||++||++||++||++|++||||||+||++++|+++. ++++
T Consensus 158 aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra~eL~pGG~mvl~~~gr~~~~~~~~~ 237 (384)
T 2efj_A 158 CLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHSEELISRGRMLLTFICKEDEFDHPNS 237 (384)
T ss_dssp CTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECCCTTTCCCCH
T ss_pred eeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCCcccCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987 6553
Q ss_pred CCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEeeEEEEeeccCCC---Cc-------
Q 017747 234 RGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLDMFQVERQGH---DR------- 303 (366)
Q Consensus 234 ~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~~~e~~~~~~~~~---~d------- 303 (366)
+ +.+.++|++||.+|+|+++++|+|++|+|+||++|++++|+++|+|+|+++|.++..|+++ ++
T Consensus 238 ~------~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps~~E~~~~le~~g~F~i~~le~~~~~~~~~~~~~~~~~~~~~ 311 (384)
T 2efj_A 238 M------DLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEILYLETFNAPYDAGFSIDDDYQGRSH 311 (384)
T ss_dssp H------HHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCCHHHHHHHHHHHCSEEEEEEEEEEEETTTTCCC---------
T ss_pred H------HHHHHHHHHHHHhCCcchhhhcccCCcccCCCHHHHHHHHHHcCCceEEEEEEEeeccccccccccccccccc
Confidence 2 3899999999999999999999999999999999999999999999999999999999876 33
Q ss_pred ------ccchhhhHhhhHHHhhhhHHHhhcCCCcchHHHHHHHHHHHHHHHHHhcCCCcEEEEEEEeeC
Q 017747 304 ------GESYGSAVARTVRAIQESTIIHHFGIGEGVLDNLFEIYGRLVDEEMAKEEIKPLTFVLLLRKL 366 (366)
Q Consensus 304 ------~~~~~~~~~~~~Ra~~e~~l~~~~g~~~~i~d~lf~r~~~~~~~~~~~~~~~~~~~~~~l~k~ 366 (366)
....++.+++++||++||+|.+||| ++++|+||+||+++++++++.++.++++++++|+||
T Consensus 312 ~~~~~d~~~~g~~~a~~iRa~~epll~~hfG--~~i~d~lF~ry~~~~~~~~~~~~~~~~~~~~~L~k~ 378 (384)
T 2efj_A 312 SPVSCDEHARAAHVASVVRSIYEPILASHFG--EAILPDLSHRIAKNAAKVLRSGKGFYDSVIISLAKK 378 (384)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHC--STTHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEEEC
T ss_pred ccccchHhHhHHHhhhhhHHhhhhhhHHhcc--HHHHHHHHHHHHHHHHHHHhhCCCceEEEEEEEEEc
Confidence 1357889999999999999999999 999999999999999999999999999999999996
|
| >1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-98 Score=737.79 Aligned_cols=348 Identities=44% Similarity=0.764 Sum_probs=328.6
Q ss_pred CCccceeccCCCCCcchHHHhhHHHHHHHHHHHHHHHHHHHHhhhhc-CCCceEEEeecCCCCcchHHHHHHHHHHHHHH
Q 017747 1 MDVEKLFHMAGGTGPTSYARNSSLQKKASDTVKHITLEALQQLYLEI-DPKTINIADLGCSSGPNTLAIIKDFVQTVEMT 79 (366)
Q Consensus 1 ~~~~~~l~M~gg~g~~sY~~nS~~Q~~~~~~~~~~l~~ai~~l~~~~-~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~ 79 (366)
|+++++|||+||+|++||++||.+|++++..++|++++||++++... .+++++|||||||+|+||+++++.||++|+++
T Consensus 1 m~~~~~~~m~gg~G~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~ 80 (359)
T 1m6e_X 1 MDVRQVLHMKGGAGENSYAMNSFIQRQVISITKPITEAAITALYSGDTVTTRLAIADLGCSSGPNALFAVTELIKTVEEL 80 (359)
T ss_dssp CCCHHHHCCCCCTTSTTTTSSCHHHHHHHHHTHHHHHHHHHHHHSSSSSSSEECCEEESCCSSTTTTTGGGTTHHHHHHH
T ss_pred CCcccccccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEecCCCCCcchHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999998765 67899999999999999999999999999999
Q ss_pred hhhhhcC-CCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceEEeccCCCcccccCCCCcccEEEcccccc
Q 017747 80 SREILQN-PAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLH 158 (366)
Q Consensus 80 ~~~~~~~-~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~~lfp~~s~~~~~S~~alh 158 (366)
|.+. ++ ++|++||+|||||+||||+||++|+.+. + . .++||++|||||||+||||++|+|++||++|||
T Consensus 81 ~~~~-~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~----~---~--~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLH 150 (359)
T 1m6e_X 81 RKKM-GRENSPEYQIFLNDLPGNDFNAIFRSLPIEN----D---V--DGVCFINGVPGSFYGRLFPRNTLHFIHSSYSLM 150 (359)
T ss_dssp HHSS-SCSSCCEEEEEEEECTTSCHHHHHTTTTTSC----S---C--TTCEEEEEEESCSSSCCSCTTCBSCEEEESCTT
T ss_pred HHhc-CCCCCCceEEEecCCCchHHHHHHHhcchhc----c---c--CCCEEEEecchhhhhccCCCCceEEEEehhhhh
Confidence 8765 54 6789999999999999999999999754 1 0 247999999999999999999999999999999
Q ss_pred cccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEEEeecCCCCCCCCCCchh
Q 017747 159 WLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSF 238 (366)
Q Consensus 159 Wls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~ 238 (366)
|||++|+.+.+ |||+|||+.++|++|.+||++||++||+.||++|++||||||+||++++|+++.++++++.+.
T Consensus 151 Wls~~p~~l~~------nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~gr~~~~~~~~~~~~ 224 (359)
T 1m6e_X 151 WLSQVPIGIES------NKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILGRRSEDRASTECCL 224 (359)
T ss_dssp BCSSCCSCCCC------CTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEEECSSSSSSSTTTST
T ss_pred hcccCchhhhc------cCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEecCCCCCccccchHH
Confidence 99999999876 999999999999999999999999999999999999999999999999999999888888778
Q ss_pred HHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEeeEEEEeeccCCCCcc-------cchhhhH
Q 017747 239 FWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLDMFQVERQGHDRG-------ESYGSAV 311 (366)
Q Consensus 239 ~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~~~e~~~~~~~~~~d~-------~~~~~~~ 311 (366)
+|+.|.++|++||.+|+|++|++|+|++|+|+||++|++++|+++|+|+|+++|.++..|++++++ ...++.+
T Consensus 225 ~~~~l~~al~~mv~eGli~~ek~d~f~~P~y~ps~~E~~~~ie~~G~F~i~~~e~~~~~~~~~~~~~d~~~~~~~~g~~~ 304 (359)
T 1m6e_X 225 IWQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIEASEIYWSSCTKDGDGGGSVEEEGYNV 304 (359)
T ss_dssp TTHHHHHHHHHHHHTTCSCCSTTGGGCCCCBCCCSHHHHHHHHHTTTBCCEEEEEEEEETTCCSSCTTCCSSTTTTTTHH
T ss_pred HHHHHHHHHHHHHHccccchhhhhccCCCccCCCHHHHHHHHHHcCCceEEEEEEEeeccCcccchhhhhhhhhHhHhHh
Confidence 999999999999999999999999999999999999999999999999999999999999876542 4678999
Q ss_pred hhhHHHhhhhHHHhhcCCCcchHHHHHHHHHHHHHHHHHhcCCCcEEEEEEEeeC
Q 017747 312 ARTVRAIQESTIIHHFGIGEGVLDNLFEIYGRLVDEEMAKEEIKPLTFVLLLRKL 366 (366)
Q Consensus 312 ~~~~Ra~~e~~l~~~~g~~~~i~d~lf~r~~~~~~~~~~~~~~~~~~~~~~l~k~ 366 (366)
++++|||+||+|.+||| ++++|+||+||+++++++++.+++++++++++|+||
T Consensus 305 a~~~Ra~~e~ll~~hfG--~~i~d~lf~ry~~~~~~~~~~~~~~~~~~~~~L~k~ 357 (359)
T 1m6e_X 305 ARCMRAVAEPLLLDHFG--EAIIEDVFHRYKLLIIERMSKEKTKFINVIVSLIRK 357 (359)
T ss_dssp HHHHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHHSSCCEEEEEEEEEEBC
T ss_pred hhhhhhhcchhhHHhcc--HHHHHHHHHHHHHHHHHHHhhCCCceEEEEEEEEeC
Confidence 99999999999999999 999999999999999999999999999999999997
|
| >3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-94 Score=714.42 Aligned_cols=359 Identities=32% Similarity=0.556 Sum_probs=301.9
Q ss_pred CCccceeccCCCCCcchHHHhhHHHHHHHHHHHHHHHHHHHHhhhhc--CCCceEEEeecCCCCcchHHHHHHHHHHHHH
Q 017747 1 MDVEKLFHMAGGTGPTSYARNSSLQKKASDTVKHITLEALQQLYLEI--DPKTINIADLGCSSGPNTLAIIKDFVQTVEM 78 (366)
Q Consensus 1 ~~~~~~l~M~gg~g~~sY~~nS~~Q~~~~~~~~~~l~~ai~~l~~~~--~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~ 78 (366)
|+++++|||+||+|++||++||.+|++++..++|++++||+++.... .+++++|||||||+|+||+.+++.||+++++
T Consensus 1 m~~~~~~~m~gg~g~~sY~~nS~~Q~~~~~~~~~~~~~ai~~l~~~~~~~~~~~~IaDlGCssG~Nt~~~v~~ii~~i~~ 80 (374)
T 3b5i_A 1 MKLERLLSMKGGKGQDSYANNSLAQAMHARSMLHLLEETLENVHLNSSASPPPFTAVDLGCSSGANTVHIIDFIVKHISK 80 (374)
T ss_dssp -------------------------CTTHHHHHHHHHHHHHTSCCCCSSSCCCEEEEEETCCSSHHHHHHHHHHHHHHHH
T ss_pred CCcccccCCCCCCCcchHHHhhHHHHHHHHHHHHHHHHHHHHhhccccCCCCceEEEecCCCCChhHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999887754 4678999999999999999999999999999
Q ss_pred HhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhh---hcCCCCCCceEEeccCCCcccccCCCCcccEEEccc
Q 017747 79 TSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRN---ERGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSN 155 (366)
Q Consensus 79 ~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~---~~~~~~~~~~f~~~vpgSFy~~lfp~~s~~~~~S~~ 155 (366)
+|... |.++|++||++||||+||||+||++|+.+.+.+.. ..+.+ .++||++|||||||+||||++|+|++||++
T Consensus 81 ~~~~~-~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~-~~~~f~~gvpgSFy~rlfP~~S~d~v~Ss~ 158 (374)
T 3b5i_A 81 RFDAA-GIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADG-NRSYFVAGVPGSFYRRLFPARTIDFFHSAF 158 (374)
T ss_dssp HHHHT-TCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CC-CBCSEEEEEESCTTSCCSCTTCEEEEEEES
T ss_pred HHhhc-CCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccC-CCceEEEecChhhhcccCCCcceEEEEecc
Confidence 98765 66678999999999999999999999976543211 11122 457999999999999999999999999999
Q ss_pred ccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEEEeecCCCCCCCCC-
Q 017747 156 SLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDR- 234 (366)
Q Consensus 156 alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~- 234 (366)
||||||++|+.+.++.+++||||+|||+.++|+ |.+||++||++||..||++|++||||||+||++++|+++.++++.
T Consensus 159 aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~-v~~ay~~Qf~~D~~~fL~~ra~eL~pGG~mvl~~~gr~~~~~~~~~ 237 (374)
T 3b5i_A 159 SLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEK-TTTAYKRQFQADLAEFLRARAAEVKRGGAMFLVCLGRTSVDPTDQG 237 (374)
T ss_dssp CTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHH-HHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCSSTTCCH
T ss_pred eeeeeccCchhhhccccccccCCceEeCCCCHH-HHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEEecCCCCcccccc
Confidence 999999999999999999999999999999998 999999999999999999999999999999999999999877763
Q ss_pred CchhHH-HHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEeeEEEEeeccCCCCcc----cchhh
Q 017747 235 GNSFFW-ELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLDMFQVERQGHDRG----ESYGS 309 (366)
Q Consensus 235 ~~~~~~-~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~~~e~~~~~~~~~~d~----~~~~~ 309 (366)
+.+.+| +.+.++|++|+.||+++++++|+|++|+|+||++|++++|+++|+|+|++++.++.+|++..+. ...++
T Consensus 238 ~~~~~~~~~l~~al~~l~~eG~i~~e~~d~f~~P~y~ps~~E~~~~l~~~~~F~I~~le~~~~~~~~~~~~~~~~~~~g~ 317 (374)
T 3b5i_A 238 GAGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIPVYAPSLQDFKEVVDANGSFAIDKLVVYKGGSPLVVNEPDDASEVGR 317 (374)
T ss_dssp HHHHHHSSHHHHHHHHTTSSSSSCHHHHSSCCCCBCCCCHHHHHHHHHHHCSEEEEEEEEEECCCCCCCSSTTCHHHHHH
T ss_pred chhhHHHHHHHHHHHHHHHhCCcchhhcccCCccccCCCHHHHHHHHHhcCCcEEEEEEEEeecCCccccccchhHHHHH
Confidence 345678 9999999999999999999999999999999999999999987889999999999999765331 46789
Q ss_pred hHhhhHHHhhhhHHHhhcCCCcchHHHHHHHHHHHHHHHHH--hcCCC--cEEEEEEEe
Q 017747 310 AVARTVRAIQESTIIHHFGIGEGVLDNLFEIYGRLVDEEMA--KEEIK--PLTFVLLLR 364 (366)
Q Consensus 310 ~~~~~~Ra~~e~~l~~~~g~~~~i~d~lf~r~~~~~~~~~~--~~~~~--~~~~~~~l~ 364 (366)
.+++++|||+||+|.+||| ++++|+||+||+++++++++ .++.+ +++++++|+
T Consensus 318 ~~a~~~Ra~~e~ll~~hfg--~~i~d~lf~ry~~~~~~~~~~~~~~~~~~~~~~~~~l~ 374 (374)
T 3b5i_A 318 AFASSCRSVAGVLVEAHIG--EELSNKLFSRVESRATSHAKDVLVNLQFFHIVASLSFT 374 (374)
T ss_dssp HHHHHHHHHHHHHHHTTSC--HHHHHHHHHHHHHHHHHTCHHHHTTCCCEEEEEEEEEC
T ss_pred HHHHHHHHhccchhHhhcc--HHHHHHHHHHHHHHHHHhHHHhhhccccceEEEEEEeC
Confidence 9999999999999999999 99999999999999999887 66666 788888885
|
| >3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=99.58 E-value=2.4e-14 Score=134.26 Aligned_cols=251 Identities=16% Similarity=0.172 Sum_probs=147.9
Q ss_pred eccCCCCCcchHHHhhHHHHHHHHHHHHHHHHHHHHhhhhcCCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcC
Q 017747 7 FHMAGGTGPTSYARNSSLQKKASDTVKHITLEALQQLYLEIDPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQN 86 (366)
Q Consensus 7 l~M~gg~g~~sY~~nS~~Q~~~~~~~~~~l~~ai~~l~~~~~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~ 86 (366)
-.|.....+..|++++..|+.....+...+. .....+|+|+|||+|..+..+. +
T Consensus 24 ~~~~~~w~a~~y~~~~~~~~~~~~~l~~~l~----------~~~~~~vLDiGcG~G~~~~~l~--------~-------- 77 (279)
T 3ccf_A 24 GTAKNFWDATLYQDKHSFVWQYGEDLLQLLN----------PQPGEFILDLGCGTGQLTEKIA--------Q-------- 77 (279)
T ss_dssp -----------------CCSSSCCHHHHHHC----------CCTTCEEEEETCTTSHHHHHHH--------H--------
T ss_pred ccchhhcCHHHHhhcchHHHHHHHHHHHHhC----------CCCCCEEEEecCCCCHHHHHHH--------h--------
Confidence 3455544466888888777665554443221 1345799999999999987431 1
Q ss_pred CCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceEEeccCCCcccccCCCCcccEEEcccccccccCCCCc
Q 017747 87 PAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPT 166 (366)
Q Consensus 87 ~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~ 166 (366)
+..+|+..|+.......+-+..+ +..|.. +++.. +-+++++|+++++.++||+.+.
T Consensus 78 --~~~~v~gvD~s~~~~~~a~~~~~---------------~~~~~~---~d~~~-~~~~~~fD~v~~~~~l~~~~d~--- 133 (279)
T 3ccf_A 78 --SGAEVLGTDNAATMIEKARQNYP---------------HLHFDV---ADARN-FRVDKPLDAVFSNAMLHWVKEP--- 133 (279)
T ss_dssp --TTCEEEEEESCHHHHHHHHHHCT---------------TSCEEE---CCTTT-CCCSSCEEEEEEESCGGGCSCH---
T ss_pred --CCCeEEEEECCHHHHHHHHhhCC---------------CCEEEE---CChhh-CCcCCCcCEEEEcchhhhCcCH---
Confidence 22689999986543332222111 112333 34433 4346899999999999997542
Q ss_pred ccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHH
Q 017747 167 LYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRS 246 (366)
Q Consensus 167 ~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~a 246 (366)
..+|+.-.+-|+|||++++...+..+. ..+.+.+...
T Consensus 134 ------------------------------------~~~l~~~~~~LkpgG~l~~~~~~~~~~-------~~~~~~~~~~ 170 (279)
T 3ccf_A 134 ------------------------------------EAAIASIHQALKSGGRFVAEFGGKGNI-------KYILEALYNA 170 (279)
T ss_dssp ------------------------------------HHHHHHHHHHEEEEEEEEEEEECTTTT-------HHHHHHHHHH
T ss_pred ------------------------------------HHHHHHHHHhcCCCcEEEEEecCCcch-------HHHHHHHHHH
Confidence 134566689999999999998876441 1233334433
Q ss_pred HHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEeeEEEEeeccCCCCcccchhhhHhhhHHHhhhhHHHhh
Q 017747 247 LAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLDMFQVERQGHDRGESYGSAVARTVRAIQESTIIHH 326 (366)
Q Consensus 247 l~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~~~e~~~~~~~~~~d~~~~~~~~~~~~Ra~~e~~l~~~ 326 (366)
+... |. .......|+++++.+++.+.+++.| |++...+.+..++.... ..+.+..|++++..+++. .
T Consensus 171 ~~~~---~~----~~~~~~~~~~~~~~~~~~~~l~~aG-f~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~-~ 237 (279)
T 3ccf_A 171 LETL---GI----HNPQALNPWYFPSIGEYVNILEKQG-FDVTYAALFNRPTTLAE----GEFGMANWIQMFASAFLV-G 237 (279)
T ss_dssp HHHH---TC----CCGGGGCCCCCCCHHHHHHHHHHHT-EEEEEEEEEECCEECSS----GGGHHHHHHHHHCHHHHT-T
T ss_pred HHhc---CC----ccccCcCceeCCCHHHHHHHHHHcC-CEEEEEEEecccccccC----CHHHHHHHHHHhhHHHhc-c
Confidence 3332 21 1234566788999999999999999 99988887765542221 134677888887777663 4
Q ss_pred cCCCcchHHHHHHHHHHHHHHHHHhcC---CCcEEEEEEEee
Q 017747 327 FGIGEGVLDNLFEIYGRLVDEEMAKEE---IKPLTFVLLLRK 365 (366)
Q Consensus 327 ~g~~~~i~d~lf~r~~~~~~~~~~~~~---~~~~~~~~~l~k 365 (366)
++ ++..+++.+++.+.+.......+ ..+..+++.-+|
T Consensus 238 ~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~a~K 277 (279)
T 3ccf_A 238 LT--PDQQVQLIRKVEATLQDKLYHQESWTADYRRIRIVSIK 277 (279)
T ss_dssp CC--HHHHHHHHHHHHHHHHHHHEETTEEEECCEEEEEEEEE
T ss_pred CC--HHHHHHHHHHHHHHHHhhccCCCcEEEEEEEEEEEEec
Confidence 66 77888888888888876543222 234444554444
|
| >2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.56 E-value=4.5e-14 Score=130.07 Aligned_cols=229 Identities=10% Similarity=0.112 Sum_probs=140.7
Q ss_pred cchHHHhhHHHHHHHHHHHHHHHHHHHHhhhhcCCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEE
Q 017747 15 PTSYARNSSLQKKASDTVKHITLEALQQLYLEIDPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFY 94 (366)
Q Consensus 15 ~~sY~~nS~~Q~~~~~~~~~~l~~ai~~l~~~~~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~ 94 (366)
...|++.+..|......++..+. .....+|+|+|||+|..+..+. ++. |..+++
T Consensus 8 ~~~y~~~~~~~~~~~~~l~~~~~----------~~~~~~vLdiG~G~G~~~~~l~--------~~~--------~~~~v~ 61 (259)
T 2p35_A 8 AQQYLKFEDERTRPARDLLAQVP----------LERVLNGYDLGCGPGNSTELLT--------DRY--------GVNVIT 61 (259)
T ss_dssp CGGGBCCCCGGGHHHHHHHTTCC----------CSCCSSEEEETCTTTHHHHHHH--------HHH--------CTTSEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC----------CCCCCEEEEecCcCCHHHHHHH--------HhC--------CCCEEE
Confidence 56899988888777654332111 2345799999999999987532 221 237889
Q ss_pred ecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCC
Q 017747 95 LNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGES 174 (366)
Q Consensus 95 ~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~ 174 (366)
..|+.......+-+.. .+-.|.. +++.+ +.|++++|+++|+.++||+.+
T Consensus 62 ~~D~s~~~~~~a~~~~---------------~~~~~~~---~d~~~-~~~~~~fD~v~~~~~l~~~~~------------ 110 (259)
T 2p35_A 62 GIDSDDDMLEKAADRL---------------PNTNFGK---ADLAT-WKPAQKADLLYANAVFQWVPD------------ 110 (259)
T ss_dssp EEESCHHHHHHHHHHS---------------TTSEEEE---CCTTT-CCCSSCEEEEEEESCGGGSTT------------
T ss_pred EEECCHHHHHHHHHhC---------------CCcEEEE---CChhh-cCccCCcCEEEEeCchhhCCC------------
Confidence 9998654333222211 1123333 35544 337889999999999999743
Q ss_pred CccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcC
Q 017747 175 INKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQG 254 (366)
Q Consensus 175 ~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG 254 (366)
...+|+.-.+-|+|||+++++..+.... .....+.++...+
T Consensus 111 ---------------------------~~~~l~~~~~~L~pgG~l~~~~~~~~~~------------~~~~~~~~~~~~~ 151 (259)
T 2p35_A 111 ---------------------------HLAVLSQLMDQLESGGVLAVQMPDNLQE------------PTHIAMHETADGG 151 (259)
T ss_dssp ---------------------------HHHHHHHHGGGEEEEEEEEEEEECCTTS------------HHHHHHHHHHHHS
T ss_pred ---------------------------HHHHHHHHHHhcCCCeEEEEEeCCCCCc------------HHHHHHHHHhcCc
Confidence 1234666789999999999998754321 1122233333222
Q ss_pred ccchhhhcccCccccCCCHHHHHHHHhhcCceEEeeEEEE-eeccCCCCcccchhhhHhhhHHHhh-hhHHHhhcCCCcc
Q 017747 255 EIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLDMF-QVERQGHDRGESYGSAVARTVRAIQ-ESTIIHHFGIGEG 332 (366)
Q Consensus 255 ~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~~~e~~-~~~~~~~~d~~~~~~~~~~~~Ra~~-e~~l~~~~g~~~~ 332 (366)
.......+....+..+++++++.+.+++.| |++...+.. ..++ . ..+.+..|+++.. .+++ ..++ ++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG-f~v~~~~~~~~~~~---~----~~~~~~~~l~~~~~~~~~-~~~~--~~ 220 (259)
T 2p35_A 152 PWKDAFSGGGLRRKPLPPPSDYFNALSPKS-SRVDVWHTVYNHPM---K----DADSIVEWVKGTGLRPYL-AAAG--EE 220 (259)
T ss_dssp TTGGGC-------CCCCCHHHHHHHHGGGE-EEEEEEEEEEEEEE---S----CHHHHHHHHTTTTTTHHH-HTTC--GG
T ss_pred chHHHhccccccccCCCCHHHHHHHHHhcC-CceEEEEEEeeecc---C----CchHHhhhhhcCcchHHH-HhCC--HH
Confidence 111111111134667899999999999999 887555432 2222 1 2456777887764 3444 4577 88
Q ss_pred hHHHHHHHHHHHHHHHHH
Q 017747 333 VLDNLFEIYGRLVDEEMA 350 (366)
Q Consensus 333 i~d~lf~r~~~~~~~~~~ 350 (366)
..+++.+++.+.+.+.+.
T Consensus 221 ~~~~~~~~~~~~~~~~~~ 238 (259)
T 2p35_A 221 NREAFLADYTRRIAAAYP 238 (259)
T ss_dssp GHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHhCC
Confidence 889999999888887654
|
| >2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A | Back alignment and structure |
|---|
Probab=99.42 E-value=2e-12 Score=119.02 Aligned_cols=220 Identities=15% Similarity=0.148 Sum_probs=132.0
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
....+|+|+|||+|..+..+ .+. ..+++..|+.......+-+.+. +. .++
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l--------~~~----------~~~v~~vD~s~~~~~~a~~~~~----------~~--~~~ 87 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPL--------IAR----------GYRYIALDADAAMLEVFRQKIA----------GV--DRK 87 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHH--------HTT----------TCEEEEEESCHHHHHHHHHHTT----------TS--CTT
T ss_pred CCCCEEEEeCCcCCHHHHHH--------HHC----------CCEEEEEECCHHHHHHHHHHhh----------cc--CCc
Confidence 34689999999999998742 111 2678999986543333322220 00 122
Q ss_pred e-EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 129 ~-f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
+ |.. +++.+-.+|++++|+++++.++||+.+. ..+|+
T Consensus 88 ~~~~~---~d~~~~~~~~~~fD~v~~~~~l~~~~~~---------------------------------------~~~l~ 125 (263)
T 2yqz_A 88 VQVVQ---ADARAIPLPDESVHGVIVVHLWHLVPDW---------------------------------------PKVLA 125 (263)
T ss_dssp EEEEE---SCTTSCCSCTTCEEEEEEESCGGGCTTH---------------------------------------HHHHH
T ss_pred eEEEE---cccccCCCCCCCeeEEEECCchhhcCCH---------------------------------------HHHHH
Confidence 2 333 4665444789999999999999997531 23455
Q ss_pred HHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHc-CccchhhhcccCccccCCCHHHHHHHHhhcCce
Q 017747 208 SRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQ-GEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSF 286 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~e-G~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf 286 (366)
.-.+-|+|||++++.+...+. ...+ .+...|.++... |. ....+.++++.+++.+.+++.| |
T Consensus 126 ~~~~~L~pgG~l~~~~~~~~~--------~~~~-~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~l~~~G-f 188 (263)
T 2yqz_A 126 EAIRVLKPGGALLEGWDQAEA--------SPEW-TLQERWRAFAAEEGF-------PVERGLHAKRLKEVEEALRRLG-L 188 (263)
T ss_dssp HHHHHEEEEEEEEEEEEEECC--------CHHH-HHHHHHHHHHHHHTC-------CCCCCHHHHHHHHHHHHHHHTT-C
T ss_pred HHHHHCCCCcEEEEEecCCCc--------cHHH-HHHHHHHHHHHHhCC-------CcccccccCCHHHHHHHHHHcC-C
Confidence 668899999999999433211 0111 122333333211 21 0122456778999999999999 9
Q ss_pred EEeeEEEEeeccCCCCcccchhhhHhhhHHHhhhhHHHhhcCCCcchHHHHHHHHHHHHHHHHHhcC---CCcEEEEEEE
Q 017747 287 KLDQLDMFQVERQGHDRGESYGSAVARTVRAIQESTIIHHFGIGEGVLDNLFEIYGRLVDEEMAKEE---IKPLTFVLLL 363 (366)
Q Consensus 287 ~i~~~e~~~~~~~~~~d~~~~~~~~~~~~Ra~~e~~l~~~~g~~~~i~d~lf~r~~~~~~~~~~~~~---~~~~~~~~~l 363 (366)
++...+..... .. ...+.+..++++.+.+.+ .+++ ++..+++.+++++.+.+.....+ .....+++..
T Consensus 189 ~~~~~~~~~~~--~~----~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 259 (263)
T 2yqz_A 189 KPRTREVARWR--EE----RTPREALEALSERLYSFT-QGLP--EPVHARVMERLWAWAEAELGDLDRPFPVEKRFLLRV 259 (263)
T ss_dssp CCEEEEEEEEE--EE----ECHHHHHHHHHTTCSGGG-SSSC--HHHHHHHHHHHHHHHHHHSSCTTSCEEEEEEEEEEE
T ss_pred CcceEEEeeee--cC----CCHHHHHHHHHHhhcccc-cCCC--HHHHHHHHHHHHHHHHHhcCCcCccccccceeEEEe
Confidence 87666554322 11 123556667766555554 4566 78888888888888887654322 1233444444
Q ss_pred eeC
Q 017747 364 RKL 366 (366)
Q Consensus 364 ~k~ 366 (366)
.||
T Consensus 260 ~rk 262 (263)
T 2yqz_A 260 SRL 262 (263)
T ss_dssp EEC
T ss_pred eec
Confidence 443
|
| >3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei} | Back alignment and structure |
|---|
Probab=99.36 E-value=2.5e-11 Score=110.22 Aligned_cols=168 Identities=18% Similarity=0.146 Sum_probs=111.5
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
.+..+|+|+|||+|..+.. +.+. .|..+++..|+.......+-+.+.. .++
T Consensus 43 ~~~~~vLDiG~G~G~~~~~--------l~~~--------~~~~~v~~vD~s~~~~~~a~~~~~~-------------~~~ 93 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAF--------LMEK--------YPEATFTLVDMSEKMLEIAKNRFRG-------------NLK 93 (234)
T ss_dssp CSSCEEEEETCTTSHHHHH--------HHHH--------CTTCEEEEEESCHHHHHHHHHHTCS-------------CTT
T ss_pred CCCCeEEEecCCCCHHHHH--------HHHh--------CCCCeEEEEECCHHHHHHHHHhhcc-------------CCC
Confidence 3568999999999999874 3332 2348899999865433333222221 112
Q ss_pred e-EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 129 ~-f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
+ |+. +++.+-.++ +++|+++++.++||++. .+...+|+
T Consensus 94 ~~~~~---~d~~~~~~~-~~fD~v~~~~~l~~~~~-------------------------------------~~~~~~l~ 132 (234)
T 3dtn_A 94 VKYIE---ADYSKYDFE-EKYDMVVSALSIHHLED-------------------------------------EDKKELYK 132 (234)
T ss_dssp EEEEE---SCTTTCCCC-SCEEEEEEESCGGGSCH-------------------------------------HHHHHHHH
T ss_pred EEEEe---CchhccCCC-CCceEEEEeCccccCCH-------------------------------------HHHHHHHH
Confidence 2 333 466544455 99999999999999733 12234567
Q ss_pred HHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhccc---CccccCCCHHHHHHHHhhcC
Q 017747 208 SRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAY---HAHFYAPSKEEIEGEVGREG 284 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f---~~P~y~ps~eEv~~~i~~~g 284 (366)
.-.+-|+|||+++++....++. ..........|.....++-++.+++..+ ..-.+.++.+|+.+.++++|
T Consensus 133 ~~~~~LkpgG~l~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aG 205 (234)
T 3dtn_A 133 RSYSILKESGIFINADLVHGET-------AFIENLNKTIWRQYVENSGLTEEEIAAGYERSKLDKDIEMNQQLNWLKEAG 205 (234)
T ss_dssp HHHHHEEEEEEEEEEEECBCSS-------HHHHHHHHHHHHHHHHTSSCCHHHHHTTC----CCCCCBHHHHHHHHHHTT
T ss_pred HHHHhcCCCcEEEEEEecCCCC-------hhhhhHHHHHHHHHHHhcCCCHHHHHHHHHhcccccccCHHHHHHHHHHcC
Confidence 7789999999999998766542 2234456667777766666666655432 12345679999999999999
Q ss_pred ceEEeeEEEE
Q 017747 285 SFKLDQLDMF 294 (366)
Q Consensus 285 sf~i~~~e~~ 294 (366)
|++.++...
T Consensus 206 -F~~v~~~~~ 214 (234)
T 3dtn_A 206 -FRDVSCIYK 214 (234)
T ss_dssp -CEEEEEEEE
T ss_pred -CCceeeeee
Confidence 988666543
|
| >3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes} | Back alignment and structure |
|---|
Probab=99.23 E-value=1.4e-10 Score=107.59 Aligned_cols=196 Identities=12% Similarity=0.151 Sum_probs=113.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+ .+. . ..+++..|+........-+.+ ...+.. .+..
T Consensus 61 ~~~~vLDiGcG~G~~~~~l--------~~~--------~-~~~v~gvD~s~~~~~~a~~~~--------~~~~~~-~~~~ 114 (273)
T 3bus_A 61 SGDRVLDVGCGIGKPAVRL--------ATA--------R-DVRVTGISISRPQVNQANARA--------TAAGLA-NRVT 114 (273)
T ss_dssp TTCEEEEESCTTSHHHHHH--------HHH--------S-CCEEEEEESCHHHHHHHHHHH--------HHTTCT-TTEE
T ss_pred CCCEEEEeCCCCCHHHHHH--------HHh--------c-CCEEEEEeCCHHHHHHHHHHH--------HhcCCC-cceE
Confidence 4579999999999988753 222 1 268888998653322221111 111110 1122
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
|.. +++.+-.+|++++|+++|+.++||+.+. ..+|+.-
T Consensus 115 ~~~---~d~~~~~~~~~~fD~v~~~~~l~~~~~~---------------------------------------~~~l~~~ 152 (273)
T 3bus_A 115 FSY---ADAMDLPFEDASFDAVWALESLHHMPDR---------------------------------------GRALREM 152 (273)
T ss_dssp EEE---CCTTSCCSCTTCEEEEEEESCTTTSSCH---------------------------------------HHHHHHH
T ss_pred EEE---CccccCCCCCCCccEEEEechhhhCCCH---------------------------------------HHHHHHH
Confidence 333 4665555888999999999999997431 1346677
Q ss_pred HHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEe
Q 017747 210 SEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLD 289 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~ 289 (366)
.+-|+|||++++..+...+... . .....+..+. ..+ ...++++.+++.+.+++.| |++.
T Consensus 153 ~~~L~pgG~l~i~~~~~~~~~~------~---~~~~~~~~~~----------~~~-~~~~~~~~~~~~~~l~~aG-f~~~ 211 (273)
T 3bus_A 153 ARVLRPGGTVAIADFVLLAPVE------G---AKKEAVDAFR----------AGG-GVLSLGGIDEYESDVRQAE-LVVT 211 (273)
T ss_dssp HTTEEEEEEEEEEEEEESSCCC------H---HHHHHHHHHH----------HHH-TCCCCCCHHHHHHHHHHTT-CEEE
T ss_pred HHHcCCCeEEEEEEeeccCCCC------h---hHHHHHHHHH----------hhc-CccCCCCHHHHHHHHHHcC-CeEE
Confidence 8999999999999887653210 1 1111222211 011 1235789999999999999 9987
Q ss_pred eEEEEeeccCCCCcccchhhhHhhhHHHhhhhHHHhhcCCCcchHHHHHHHHHH
Q 017747 290 QLDMFQVERQGHDRGESYGSAVARTVRAIQESTIIHHFGIGEGVLDNLFEIYGR 343 (366)
Q Consensus 290 ~~e~~~~~~~~~~d~~~~~~~~~~~~Ra~~e~~l~~~~g~~~~i~d~lf~r~~~ 343 (366)
..+.+...+... + ..+...+++.... +...+| ++..+.+.+.++.
T Consensus 212 ~~~~~~~~~~~~-----~-~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~ 256 (273)
T 3bus_A 212 STVDISAQARPS-----L-VKTAEAFENARSQ-VEPFMG--AEGLDRMIATFRG 256 (273)
T ss_dssp EEEECHHHHTTH-----H-HHHHHHHHHTHHH-HHHHHC--HHHHHHHHHHHHH
T ss_pred EEEECcHhHHHH-----H-HHHHHHHHHhHHH-HHhhcC--HHHHHHHHHHHHH
Confidence 776654332110 1 1122222222222 335577 6666666555554
|
| >3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A* | Back alignment and structure |
|---|
Probab=99.21 E-value=2.1e-09 Score=98.72 Aligned_cols=152 Identities=15% Similarity=0.138 Sum_probs=99.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+. +.+ ..+|+..|+........-+.... ..++
T Consensus 55 ~~~~vLdiG~G~G~~~~~l~--------~~~---------~~~v~~vD~s~~~~~~a~~~~~~-------------~~~~ 104 (266)
T 3ujc_A 55 ENSKVLDIGSGLGGGCMYIN--------EKY---------GAHTHGIDICSNIVNMANERVSG-------------NNKI 104 (266)
T ss_dssp TTCEEEEETCTTSHHHHHHH--------HHH---------CCEEEEEESCHHHHHHHHHTCCS-------------CTTE
T ss_pred CCCEEEEECCCCCHHHHHHH--------HHc---------CCEEEEEeCCHHHHHHHHHHhhc-------------CCCe
Confidence 45799999999999987532 221 16888999865433322222211 1122
Q ss_pred -EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
|.. +++.+-.+|++++|+++++.++||++. .|...+|+.
T Consensus 105 ~~~~---~d~~~~~~~~~~fD~v~~~~~l~~~~~-------------------------------------~~~~~~l~~ 144 (266)
T 3ujc_A 105 IFEA---NDILTKEFPENNFDLIYSRDAILALSL-------------------------------------ENKNKLFQK 144 (266)
T ss_dssp EEEE---CCTTTCCCCTTCEEEEEEESCGGGSCH-------------------------------------HHHHHHHHH
T ss_pred EEEE---CccccCCCCCCcEEEEeHHHHHHhcCh-------------------------------------HHHHHHHHH
Confidence 333 466555678999999999999999721 245567788
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEE
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKL 288 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i 288 (366)
-.+-|+|||++++..+...+..+. .+.+...+.. . ...+++.+++.+.+++.| |++
T Consensus 145 ~~~~L~pgG~l~~~~~~~~~~~~~-------~~~~~~~~~~---~-------------~~~~~~~~~~~~~l~~~G-f~~ 200 (266)
T 3ujc_A 145 CYKWLKPTGTLLITDYCATEKENW-------DDEFKEYVKQ---R-------------KYTLITVEEYADILTACN-FKN 200 (266)
T ss_dssp HHHHEEEEEEEEEEEEEESCGGGC-------CHHHHHHHHH---H-------------TCCCCCHHHHHHHHHHTT-CEE
T ss_pred HHHHcCCCCEEEEEEeccCCcccc-------hHHHHHHHhc---C-------------CCCCCCHHHHHHHHHHcC-CeE
Confidence 899999999999998866542111 1112221111 1 234679999999999999 988
Q ss_pred eeEEEEe
Q 017747 289 DQLDMFQ 295 (366)
Q Consensus 289 ~~~e~~~ 295 (366)
.+.+.+.
T Consensus 201 ~~~~~~~ 207 (266)
T 3ujc_A 201 VVSKDLS 207 (266)
T ss_dssp EEEEECH
T ss_pred EEEEeCC
Confidence 7666443
|
| >3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=6.8e-10 Score=105.09 Aligned_cols=223 Identities=13% Similarity=0.144 Sum_probs=127.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+.... + .+|+..|+..+.....-+.+. ..+. ..++
T Consensus 72 ~~~~vLDiGcG~G~~~~~la~~~----------------~-~~v~gvD~s~~~~~~a~~~~~--------~~~~--~~~v 124 (302)
T 3hem_A 72 PGMTLLDIGCGWGSTMRHAVAEY----------------D-VNVIGLTLSENQYAHDKAMFD--------EVDS--PRRK 124 (302)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH----------------C-CEEEEEECCHHHHHHHHHHHH--------HSCC--SSCE
T ss_pred CcCEEEEeeccCcHHHHHHHHhC----------------C-CEEEEEECCHHHHHHHHHHHH--------hcCC--CCce
Confidence 45799999999999987532211 2 679999986543332222111 1111 1122
Q ss_pred -EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
+.. +++. .+ ++++|+++|..++|++.+ |..... .+++..+|+.
T Consensus 125 ~~~~---~d~~-~~--~~~fD~v~~~~~~~~~~d-~~~~~~-----------------------------~~~~~~~l~~ 168 (302)
T 3hem_A 125 EVRI---QGWE-EF--DEPVDRIVSLGAFEHFAD-GAGDAG-----------------------------FERYDTFFKK 168 (302)
T ss_dssp EEEE---CCGG-GC--CCCCSEEEEESCGGGTTC-CSSCCC-----------------------------TTHHHHHHHH
T ss_pred EEEE---CCHH-Hc--CCCccEEEEcchHHhcCc-cccccc-----------------------------hhHHHHHHHH
Confidence 333 3552 33 889999999999999877 321111 1356778888
Q ss_pred HHHHhccCceEEEEeecCCCCCCCC-CCchhHHHHHHHHHHHHHHcCccchhhhcccCccc-cCCCHHHHHHHHhhcCce
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVD-RGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHF-YAPSKEEIEGEVGREGSF 286 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~-~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~-y~ps~eEv~~~i~~~gsf 286 (366)
-.+-|+|||++++......+..... .......+ ...+.+... ....|. +.|+.+++.+.+++.| |
T Consensus 169 ~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~----------~~~~p~~~~~s~~~~~~~l~~aG-f 235 (302)
T 3hem_A 169 FYNLTPDDGRMLLHTITIPDKEEAQELGLTSPMS--LLRFIKFIL----------TEIFPGGRLPRISQVDYYSSNAG-W 235 (302)
T ss_dssp HHHSSCTTCEEEEEEEECCCHHHHHHHTCCCCHH--HHHHHHHHH----------HHTCTTCCCCCHHHHHHHHHHHT-C
T ss_pred HHHhcCCCcEEEEEEEeccCccchhhcccccccc--ccchHHHHH----------HhcCCCCCCCCHHHHHHHHHhCC-c
Confidence 9999999999999988776421000 00000000 011112211 123343 6799999999999999 9
Q ss_pred EEeeEEEEeeccCCCCcccchhhhHhhhHHHhhh--hHHHhhcCCCcchHHHHHHHHHHHHHHHHHhcCCCcEEEE
Q 017747 287 KLDQLDMFQVERQGHDRGESYGSAVARTVRAIQE--STIIHHFGIGEGVLDNLFEIYGRLVDEEMAKEEIKPLTFV 360 (366)
Q Consensus 287 ~i~~~e~~~~~~~~~~d~~~~~~~~~~~~Ra~~e--~~l~~~~g~~~~i~d~lf~r~~~~~~~~~~~~~~~~~~~~ 360 (366)
++..++.+... ++.++..|.+.+-. +-+...++ ++..+ .|+.|-.-.+..++........++
T Consensus 236 ~~~~~~~~~~~---------y~~tl~~w~~~~~~~~~~~~~~~~--~~~~~-~w~~yl~~~~~~f~~~~~~~~q~~ 299 (302)
T 3hem_A 236 KVERYHRIGAN---------YVPTLNAWADALQAHKDEAIALKG--QETCD-IYMHYLRGCSDLFRDKYTDVCQFT 299 (302)
T ss_dssp EEEEEEECGGG---------HHHHHHHHHHHHHHTHHHHHHHHC--HHHHH-HHHHHHHHHHHHHHTTSSEEEEEE
T ss_pred EEEEEEeCchh---------HHHHHHHHHHHHHHhHHHHHHHhC--HHHHH-HHHHHHHHHHHHHhCCCCeEEEEE
Confidence 98777654322 34445455444433 22234456 44443 355555555555666655555544
|
| >4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=2.5e-10 Score=107.08 Aligned_cols=165 Identities=18% Similarity=0.187 Sum_probs=98.3
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+...+|+|+|||+|..++. +.++. ..|..+|+..|+...+....-+.+. ..+. ..+
T Consensus 69 ~~~~~vLDlGcGtG~~~~~--------la~~~------~~~~~~v~gvD~s~~ml~~A~~~~~--------~~~~--~~~ 124 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLS--------VRRNI------HHDNCKIIAIDNSPAMIERCRRHID--------AYKA--PTP 124 (261)
T ss_dssp CTTCEEEEETCTTTHHHHH--------HHHTC------CSSSCEEEEEESCHHHHHHHHHHHH--------TSCC--SSC
T ss_pred CCCCEEEEEeCCCCHHHHH--------HHHhc------CCCCCEEEEEECCHHHHHHHHHHHH--------hhcc--Cce
Confidence 3457999999999999875 33321 2356899999997643332222111 1111 123
Q ss_pred e-EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 129 ~-f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
+ |+. +++.+ +|.++.|++++++++||++. .|...+|+
T Consensus 125 v~~~~---~D~~~--~~~~~~d~v~~~~~l~~~~~-------------------------------------~~~~~~l~ 162 (261)
T 4gek_A 125 VDVIE---GDIRD--IAIENASMVVLNFTLQFLEP-------------------------------------SERQALLD 162 (261)
T ss_dssp EEEEE---SCTTT--CCCCSEEEEEEESCGGGSCH-------------------------------------HHHHHHHH
T ss_pred EEEee---ccccc--ccccccccceeeeeeeecCc-------------------------------------hhHhHHHH
Confidence 3 444 35533 35567999999999999632 13345677
Q ss_pred HHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHH-HcCccchhhhc----ccCccccCCCHHHHHHHHhh
Q 017747 208 SRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILV-SQGEIEKEKLV----AYHAHFYAPSKEEIEGEVGR 282 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv-~eG~i~~e~~d----~f~~P~y~ps~eEv~~~i~~ 282 (366)
.-.+-|+|||+|+++-...... ..+.+.+...+.+.. ..|. ++.+.. .........|.+|+++.+++
T Consensus 163 ~i~~~LkpGG~lii~e~~~~~~-------~~~~~~~~~~~~~~~~~~g~-s~~ei~~~~~~l~~~~~~~s~~~~~~~L~~ 234 (261)
T 4gek_A 163 KIYQGLNPGGALVLSEKFSFED-------AKVGELLFNMHHDFKRANGY-SELEISQKRSMLENVMLTDSVETHKARLHK 234 (261)
T ss_dssp HHHHHEEEEEEEEEEEEBCCSS-------HHHHHHHHHHHHHHHHHTTG-GGSTTHHHHHHHHHHCCCBCHHHHHHHHHH
T ss_pred HHHHHcCCCcEEEEEeccCCCC-------HHHHHHHHHHHHHHHHHcCC-CHHHHHHHHhhhcccccCCCHHHHHHHHHH
Confidence 8899999999999975544332 112233333333332 2342 222211 11122345689999999999
Q ss_pred cCceEE
Q 017747 283 EGSFKL 288 (366)
Q Consensus 283 ~gsf~i 288 (366)
+| |+.
T Consensus 235 AG-F~~ 239 (261)
T 4gek_A 235 AG-FEH 239 (261)
T ss_dssp HT-CSE
T ss_pred cC-CCe
Confidence 99 864
|
| >3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian} | Back alignment and structure |
|---|
Probab=99.15 E-value=1.3e-10 Score=104.31 Aligned_cols=161 Identities=15% Similarity=0.136 Sum_probs=101.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+ .++ ..+++..|+.......+-+.++ .+--
T Consensus 45 ~~~~vLDiGcG~G~~~~~l--------~~~----------~~~v~~vD~s~~~~~~a~~~~~--------------~~~~ 92 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKL--------LLA----------GRTVYGIEPSREMRMIAKEKLP--------------KEFS 92 (220)
T ss_dssp CCSEEEEECCTTSHHHHHH--------HHT----------TCEEEEECSCHHHHHHHHHHSC--------------TTCC
T ss_pred CCCeEEEeCCCCCHHHHHH--------HhC----------CCeEEEEeCCHHHHHHHHHhCC--------------CceE
Confidence 4579999999999988642 221 2688899986543222222211 0112
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
|+. +++.+-.++ +++|+++++.++||+.. | +...+|+.-
T Consensus 93 ~~~---~d~~~~~~~-~~fD~v~~~~~l~~~~~-~------------------------------------~~~~~l~~~ 131 (220)
T 3hnr_A 93 ITE---GDFLSFEVP-TSIDTIVSTYAFHHLTD-D------------------------------------EKNVAIAKY 131 (220)
T ss_dssp EES---CCSSSCCCC-SCCSEEEEESCGGGSCH-H------------------------------------HHHHHHHHH
T ss_pred EEe---CChhhcCCC-CCeEEEEECcchhcCCh-H------------------------------------HHHHHHHHH
Confidence 333 466554556 99999999999999744 1 113456777
Q ss_pred HHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEe
Q 017747 210 SEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLD 289 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~ 289 (366)
.+-|+|||+++++.+...+. ......+..+...|.... ..-..+.++++.+++.+.+++.| |++.
T Consensus 132 ~~~LkpgG~l~i~~~~~~~~-----------~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~aG-f~v~ 196 (220)
T 3hnr_A 132 SQLLNKGGKIVFADTIFADQ-----------DAYDKTVEAAKQRGFHQL---ANDLQTEYYTRIPVMQTIFENNG-FHVT 196 (220)
T ss_dssp HHHSCTTCEEEEEEECBSSH-----------HHHHHHHHHHHHTTCHHH---HHHHHHSCCCBHHHHHHHHHHTT-EEEE
T ss_pred HHhcCCCCEEEEEeccccCh-----------HHHHHHHHHHHhCCCccc---hhhcchhhcCCHHHHHHHHHHCC-CEEE
Confidence 89999999999997655432 122333333334443211 11233467789999999999999 9987
Q ss_pred eEEEEeecc
Q 017747 290 QLDMFQVER 298 (366)
Q Consensus 290 ~~e~~~~~~ 298 (366)
..+.....|
T Consensus 197 ~~~~~~~~w 205 (220)
T 3hnr_A 197 FTRLNHFVW 205 (220)
T ss_dssp EEECSSSEE
T ss_pred EeeccceEE
Confidence 776544444
|
| >3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei} | Back alignment and structure |
|---|
Probab=99.13 E-value=5.4e-10 Score=100.59 Aligned_cols=177 Identities=14% Similarity=0.134 Sum_probs=106.7
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCC--C
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGS--S 126 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~--~ 126 (366)
+...+|+|+|||+|..+..+ .+. ..+++..|+.......+-+.+.. .+... .
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l--------~~~----------~~~v~~vD~s~~~~~~a~~~~~~--------~~~~~~~~ 82 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLEL--------ASK----------GYSVTGIDINSEAIRLAETAARS--------PGLNQKTG 82 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHH--------HHT----------TCEEEEEESCHHHHHHHHHHTTC--------CSCCSSSS
T ss_pred CCCCeEEEECCCCCHHHHHH--------HhC----------CCeEEEEECCHHHHHHHHHHHHh--------cCCccccC
Confidence 45689999999999988742 221 26889999865433333222211 00000 0
Q ss_pred Cc-eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 017747 127 PS-VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLF 205 (366)
Q Consensus 127 ~~-~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~F 205 (366)
.+ -|.. +++..-.++++++|+++++.++|++.+. .+...+
T Consensus 83 ~~~~~~~---~d~~~~~~~~~~~D~v~~~~~l~~~~~~------------------------------------~~~~~~ 123 (235)
T 3sm3_A 83 GKAEFKV---ENASSLSFHDSSFDFAVMQAFLTSVPDP------------------------------------KERSRI 123 (235)
T ss_dssp CEEEEEE---CCTTSCCSCTTCEEEEEEESCGGGCCCH------------------------------------HHHHHH
T ss_pred cceEEEE---ecccccCCCCCceeEEEEcchhhcCCCH------------------------------------HHHHHH
Confidence 01 2333 4555545789999999999999996541 123456
Q ss_pred HHHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhccc--CccccCCCHHHHHHHHhhc
Q 017747 206 LRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAY--HAHFYAPSKEEIEGEVGRE 283 (366)
Q Consensus 206 L~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f--~~P~y~ps~eEv~~~i~~~ 283 (366)
|+.-.+-|+|||+++++.+++.... ..+.......+......|.......... ....++++.+|+.+++++.
T Consensus 124 l~~~~~~L~pgG~l~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~a 197 (235)
T 3sm3_A 124 IKEVFRVLKPGAYLYLVEFGQNWHL------KLYRKRYLHDFPITKEEGSFLARDPETGETEFIAHHFTEKELVFLLTDC 197 (235)
T ss_dssp HHHHHHHEEEEEEEEEEEEBCCTTS------HHHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECBCHHHHHHHHHTT
T ss_pred HHHHHHHcCCCeEEEEEECCcchhH------HHHHHHhhhhccchhhhcceEecccccCCcceeeEeCCHHHHHHHHHHc
Confidence 7778899999999999998875431 1122222233322222222111111111 2335688999999999999
Q ss_pred CceEEeeEEEEeec
Q 017747 284 GSFKLDQLDMFQVE 297 (366)
Q Consensus 284 gsf~i~~~e~~~~~ 297 (366)
| |++..++....+
T Consensus 198 G-f~~~~~~~~~~~ 210 (235)
T 3sm3_A 198 R-FEIDYFRVKELE 210 (235)
T ss_dssp T-EEEEEEEEEEEE
T ss_pred C-CEEEEEEeccee
Confidence 9 999888775544
|
| >2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A* | Back alignment and structure |
|---|
Probab=99.12 E-value=1e-10 Score=110.48 Aligned_cols=159 Identities=14% Similarity=0.169 Sum_probs=93.4
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcc--eEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEF--HFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSP 127 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~--~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~ 127 (366)
...+|+|+|||+|..|..++..+ ..+ .|.. .++..|...++....-+.+. ...+ ..
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l----~~~--------~~~~~v~~~~vD~S~~ml~~a~~~~~-------~~~~---~~ 109 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKV----QAQ--------YPGVCINNEVVEPSAEQIAKYKELVA-------KTSN---LE 109 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHH----HHH--------STTCEEEEEEECSCHHHHHHHHHHHH-------TCSS---CT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHH----Hhh--------CCCceeeEEEEeCCHHHHHHHHHHHH-------hccC---CC
Confidence 46899999999998776544443 221 1234 45899987654433322111 0000 12
Q ss_pred ceEEeccCCCcccc------cCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHH
Q 017747 128 SVYIAGYPGSFYGR------LFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQED 201 (366)
Q Consensus 128 ~~f~~~vpgSFy~~------lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D 201 (366)
++-+....++...- -|+++++|+++++.++||+.+.+
T Consensus 110 ~v~~~~~~~~~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~d~~------------------------------------- 152 (292)
T 2aot_A 110 NVKFAWHKETSSEYQSRMLEKKELQKWDFIHMIQMLYYVKDIP------------------------------------- 152 (292)
T ss_dssp TEEEEEECSCHHHHHHHHHTTTCCCCEEEEEEESCGGGCSCHH-------------------------------------
T ss_pred cceEEEEecchhhhhhhhccccCCCceeEEEEeeeeeecCCHH-------------------------------------
Confidence 22111112233211 25789999999999999976532
Q ss_pred HHHHHHHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHh
Q 017747 202 FTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVG 281 (366)
Q Consensus 202 ~~~FL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~ 281 (366)
.+|+.-.+-|||||++++.....+. .|. ..|..... . +.. .....+++++++.+.++
T Consensus 153 --~~l~~~~r~LkpgG~l~i~~~~~~~----------~~~---~~~~~~~~-~-~~~------~~~~~~~~~~~~~~~l~ 209 (292)
T 2aot_A 153 --ATLKFFHSLLGTNAKMLIIVVSGSS----------GWD---KLWKKYGS-R-FPQ------DDLCQYITSDDLTQMLD 209 (292)
T ss_dssp --HHHHHHHHTEEEEEEEEEEEECTTS----------HHH---HHHHHHGG-G-SCC------CTTCCCCCHHHHHHHHH
T ss_pred --HHHHHHHHHcCCCcEEEEEEecCCc----------cHH---HHHHHHHH-h-ccC------CCcccCCCHHHHHHHHH
Confidence 2355668899999999999765421 121 22332211 0 000 01245689999999999
Q ss_pred hcCceEEeeE
Q 017747 282 REGSFKLDQL 291 (366)
Q Consensus 282 ~~gsf~i~~~ 291 (366)
+.| |++...
T Consensus 210 ~aG-f~~~~~ 218 (292)
T 2aot_A 210 NLG-LKYECY 218 (292)
T ss_dssp HHT-CCEEEE
T ss_pred HCC-CceEEE
Confidence 999 887653
|
| >3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A* | Back alignment and structure |
|---|
Probab=99.09 E-value=1.5e-09 Score=99.68 Aligned_cols=211 Identities=14% Similarity=0.032 Sum_probs=125.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+.. +.+. .+ .+++..|+.......+-+.+. ..+.. ..-.
T Consensus 46 ~~~~vLDiG~G~G~~~~~--------l~~~--------~~-~~v~~vD~s~~~~~~a~~~~~--------~~~~~-~~~~ 99 (257)
T 3f4k_A 46 DDAKIADIGCGTGGQTLF--------LADY--------VK-GQITGIDLFPDFIEIFNENAV--------KANCA-DRVK 99 (257)
T ss_dssp TTCEEEEETCTTSHHHHH--------HHHH--------CC-SEEEEEESCHHHHHHHHHHHH--------HTTCT-TTEE
T ss_pred CCCeEEEeCCCCCHHHHH--------HHHh--------CC-CeEEEEECCHHHHHHHHHHHH--------HcCCC-CceE
Confidence 457999999999999875 3232 12 388999986533222221111 11111 1122
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
|+. +++..-.+|++++|+++++.++||+ . +. .+|+.-
T Consensus 100 ~~~---~d~~~~~~~~~~fD~v~~~~~l~~~-~-~~--------------------------------------~~l~~~ 136 (257)
T 3f4k_A 100 GIT---GSMDNLPFQNEELDLIWSEGAIYNI-G-FE--------------------------------------RGMNEW 136 (257)
T ss_dssp EEE---CCTTSCSSCTTCEEEEEEESCSCCC-C-HH--------------------------------------HHHHHH
T ss_pred EEE---CChhhCCCCCCCEEEEEecChHhhc-C-HH--------------------------------------HHHHHH
Confidence 443 4664444788999999999999997 2 11 235566
Q ss_pred HHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEe
Q 017747 210 SEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLD 289 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~ 289 (366)
.+-|+|||++++..+......+. ..+...|... .| ..++.+++.+.+++.| |++.
T Consensus 137 ~~~L~pgG~l~~~~~~~~~~~~~--------~~~~~~~~~~---------------~~-~~~~~~~~~~~l~~aG-f~~v 191 (257)
T 3f4k_A 137 SKYLKKGGFIAVSEASWFTSERP--------AEIEDFWMDA---------------YP-EISVIPTCIDKMERAG-YTPT 191 (257)
T ss_dssp HTTEEEEEEEEEEEEEESSSCCC--------HHHHHHHHHH---------------CT-TCCBHHHHHHHHHHTT-EEEE
T ss_pred HHHcCCCcEEEEEEeeccCCCCh--------HHHHHHHHHh---------------CC-CCCCHHHHHHHHHHCC-CeEE
Confidence 88999999999998754332110 1233344431 12 2579999999999999 9987
Q ss_pred eEEEEe-eccCCCCcccchhhhHhhhHHHhhhhHHHhhcCCCcchHHHHHHHHHHHHHHHHHhcCCCcEEEEEEEeeC
Q 017747 290 QLDMFQ-VERQGHDRGESYGSAVARTVRAIQESTIIHHFGIGEGVLDNLFEIYGRLVDEEMAKEEIKPLTFVLLLRKL 366 (366)
Q Consensus 290 ~~e~~~-~~~~~~~d~~~~~~~~~~~~Ra~~e~~l~~~~g~~~~i~d~lf~r~~~~~~~~~~~~~~~~~~~~~~l~k~ 366 (366)
....+. ..|.. .+...++...+.+...+-+ +...+++.++.++....+ ......+...++.++|+
T Consensus 192 ~~~~~~~~~w~~---------~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~v~~k~ 257 (257)
T 3f4k_A 192 AHFILPENCWTE---------HYFAPQDEVRETFMKEHAG--NKTAMDFMKGQQYERSLY-SKYKDYYGYVFYIGQKR 257 (257)
T ss_dssp EEEECCGGGTCC---------CCCHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHH-HHHTTTEEEEEEEEEEC
T ss_pred EEEECChhhHHH---------HHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHH-HHhCCccceEEEEEecC
Confidence 755443 22411 1222233334444444445 566777777776666544 33345566777777775
|
| >3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=99.08 E-value=1.3e-09 Score=99.47 Aligned_cols=144 Identities=13% Similarity=0.083 Sum_probs=94.3
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+...+|+|+|||+|..+.. +.+. ..+|+..|+........-+ .-
T Consensus 40 ~~~~~vLDiGcG~G~~~~~--------l~~~----------~~~v~gvD~s~~~~~~a~~------------------~~ 83 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLEL--------CKEE----------GIESIGVDINEDMIKFCEG------------------KF 83 (240)
T ss_dssp TTCSCEEEETCTTTHHHHH--------HHHH----------TCCEEEECSCHHHHHHHHT------------------TS
T ss_pred cCCCeEEEEeCCCCHHHHH--------HHhC----------CCcEEEEECCHHHHHHHHh------------------hc
Confidence 3458999999999998764 2222 1568888986432111111 11
Q ss_pred eEEeccCCCcccc--cCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGR--LFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 129 ~f~~~vpgSFy~~--lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
-+ +.++..+- -+|++++|+++|+.++||+.. .|+..+|
T Consensus 84 ~~---~~~d~~~~~~~~~~~~fD~i~~~~~l~~~~~-------------------------------------~~~~~~l 123 (240)
T 3dli_A 84 NV---VKSDAIEYLKSLPDKYLDGVMISHFVEHLDP-------------------------------------ERLFELL 123 (240)
T ss_dssp EE---ECSCHHHHHHTSCTTCBSEEEEESCGGGSCG-------------------------------------GGHHHHH
T ss_pred ce---eeccHHHHhhhcCCCCeeEEEECCchhhCCc-------------------------------------HHHHHHH
Confidence 12 22344432 478999999999999999742 1345567
Q ss_pred HHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCce
Q 017747 207 RSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSF 286 (366)
Q Consensus 207 ~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf 286 (366)
+.-.+-|+|||++++..++..+ ... +...+ ......++++++++.+.+++.| |
T Consensus 124 ~~~~~~LkpgG~l~~~~~~~~~----------~~~-~~~~~---------------~~~~~~~~~~~~~l~~~l~~aG-f 176 (240)
T 3dli_A 124 SLCYSKMKYSSYIVIESPNPTS----------LYS-LINFY---------------IDPTHKKPVHPETLKFILEYLG-F 176 (240)
T ss_dssp HHHHHHBCTTCCEEEEEECTTS----------HHH-HHHHT---------------TSTTCCSCCCHHHHHHHHHHHT-C
T ss_pred HHHHHHcCCCcEEEEEeCCcch----------hHH-HHHHh---------------cCccccccCCHHHHHHHHHHCC-C
Confidence 7888999999999999876432 112 11111 0112345678999999999999 9
Q ss_pred EEeeEEEEe
Q 017747 287 KLDQLDMFQ 295 (366)
Q Consensus 287 ~i~~~e~~~ 295 (366)
++...+.+.
T Consensus 177 ~~~~~~~~~ 185 (240)
T 3dli_A 177 RDVKIEFFE 185 (240)
T ss_dssp EEEEEEEEC
T ss_pred eEEEEEEec
Confidence 987777653
|
| >3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=99.07 E-value=3.8e-10 Score=100.05 Aligned_cols=142 Identities=13% Similarity=0.047 Sum_probs=97.6
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceE
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVY 130 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 130 (366)
..+|+|+|||+|..+..+ .+. ..+++..|+........-+.. .+--|
T Consensus 42 ~~~vLDiGcG~G~~~~~l--------~~~----------~~~v~gvD~s~~~~~~a~~~~---------------~~~~~ 88 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHL--------ASL----------GHQIEGLEPATRLVELARQTH---------------PSVTF 88 (203)
T ss_dssp CSCEEEETCTTCHHHHHH--------HHT----------TCCEEEECCCHHHHHHHHHHC---------------TTSEE
T ss_pred CCeEEEecCCCCHHHHHH--------Hhc----------CCeEEEEeCCHHHHHHHHHhC---------------CCCeE
Confidence 578999999999988642 221 157888898643222211111 11223
Q ss_pred EeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 017747 131 IAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRS 210 (366)
Q Consensus 131 ~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra 210 (366)
+. +++.+-.+|++++|+++++.++|+++. +|...+|+.-.
T Consensus 89 ~~---~d~~~~~~~~~~fD~v~~~~~l~~~~~-------------------------------------~~~~~~l~~~~ 128 (203)
T 3h2b_A 89 HH---GTITDLSDSPKRWAGLLAWYSLIHMGP-------------------------------------GELPDALVALR 128 (203)
T ss_dssp EC---CCGGGGGGSCCCEEEEEEESSSTTCCT-------------------------------------TTHHHHHHHHH
T ss_pred Ee---CcccccccCCCCeEEEEehhhHhcCCH-------------------------------------HHHHHHHHHHH
Confidence 33 466554578899999999999999742 12345677778
Q ss_pred HHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEee
Q 017747 211 EELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQ 290 (366)
Q Consensus 211 ~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~~ 290 (366)
+-|+|||+++++....... ..++....+.++.+.+++.+.+++.| |++..
T Consensus 129 ~~L~pgG~l~i~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~~~~l~~~G-f~~~~ 178 (203)
T 3h2b_A 129 MAVEDGGGLLMSFFSGPSL-----------------------------EPMYHPVATAYRWPLPELAQALETAG-FQVTS 178 (203)
T ss_dssp HTEEEEEEEEEEEECCSSC-----------------------------EEECCSSSCEEECCHHHHHHHHHHTT-EEEEE
T ss_pred HHcCCCcEEEEEEccCCch-----------------------------hhhhchhhhhccCCHHHHHHHHHHCC-CcEEE
Confidence 9999999999998766541 11222334667889999999999999 99988
Q ss_pred EEEEe
Q 017747 291 LDMFQ 295 (366)
Q Consensus 291 ~e~~~ 295 (366)
++.+.
T Consensus 179 ~~~~~ 183 (203)
T 3h2b_A 179 SHWDP 183 (203)
T ss_dssp EEECT
T ss_pred EEecC
Confidence 87654
|
| >4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.07 E-value=8e-10 Score=103.51 Aligned_cols=168 Identities=15% Similarity=0.229 Sum_probs=102.2
Q ss_pred CCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCC
Q 017747 48 DPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSP 127 (366)
Q Consensus 48 ~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~ 127 (366)
.+++.+|+|+|||+|..+..+ .+. ..+++..|+.......+-+.+. ..+. .+
T Consensus 66 ~~~~~~vLDiGcG~G~~~~~l--------~~~----------~~~v~gvD~s~~~~~~a~~~~~--------~~~~--~~ 117 (285)
T 4htf_A 66 GPQKLRVLDAGGGEGQTAIKM--------AER----------GHQVILCDLSAQMIDRAKQAAE--------AKGV--SD 117 (285)
T ss_dssp CSSCCEEEEETCTTCHHHHHH--------HHT----------TCEEEEEESCHHHHHHHHHHHH--------C-CC--GG
T ss_pred CCCCCEEEEeCCcchHHHHHH--------HHC----------CCEEEEEECCHHHHHHHHHHHH--------hcCC--Cc
Confidence 345689999999999988642 221 2688999986543322222111 0111 01
Q ss_pred ce-EEeccCCCccccc-CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 017747 128 SV-YIAGYPGSFYGRL-FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLF 205 (366)
Q Consensus 128 ~~-f~~~vpgSFy~~l-fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~F 205 (366)
++ |+. +++.+.. ++++++|+++++.++||+.+. ..+
T Consensus 118 ~v~~~~---~d~~~~~~~~~~~fD~v~~~~~l~~~~~~---------------------------------------~~~ 155 (285)
T 4htf_A 118 NMQFIH---CAAQDVASHLETPVDLILFHAVLEWVADP---------------------------------------RSV 155 (285)
T ss_dssp GEEEEE---SCGGGTGGGCSSCEEEEEEESCGGGCSCH---------------------------------------HHH
T ss_pred ceEEEE---cCHHHhhhhcCCCceEEEECchhhcccCH---------------------------------------HHH
Confidence 22 333 4555444 688999999999999997431 234
Q ss_pred HHHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCc
Q 017747 206 LRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGS 285 (366)
Q Consensus 206 L~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gs 285 (366)
|+.-.+-|+|||++++........ .....+...|..+ ..+..... .....+.++.+++|+.+.+++.|
T Consensus 156 l~~~~~~LkpgG~l~~~~~~~~~~--------~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~aG- 223 (285)
T 4htf_A 156 LQTLWSVLRPGGVLSLMFYNAHGL--------LMHNMVAGNFDYV-QAGMPKKK--KRTLSPDYPRDPTQVYLWLEEAG- 223 (285)
T ss_dssp HHHHHHTEEEEEEEEEEEEBHHHH--------HHHHHHTTCHHHH-HTTCCCC------CCCSCCBCHHHHHHHHHHTT-
T ss_pred HHHHHHHcCCCeEEEEEEeCCchH--------HHHHHHhcCHHHH-hhhccccc--cccCCCCCCCCHHHHHHHHHHCC-
Confidence 667789999999999998766431 0111111112222 22221111 12234567789999999999999
Q ss_pred eEEeeEEEEeec
Q 017747 286 FKLDQLDMFQVE 297 (366)
Q Consensus 286 f~i~~~e~~~~~ 297 (366)
|++...+.+...
T Consensus 224 f~v~~~~~~~~~ 235 (285)
T 4htf_A 224 WQIMGKTGVRVF 235 (285)
T ss_dssp CEEEEEEEESSS
T ss_pred CceeeeeeEEEe
Confidence 999888776543
|
| >1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A* | Back alignment and structure |
|---|
Probab=99.06 E-value=8.2e-09 Score=96.56 Aligned_cols=162 Identities=15% Similarity=0.238 Sum_probs=94.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+ .+.. + .+|+..|+..+.....-+.+ ...+. ..++
T Consensus 64 ~~~~vLDiGcG~G~~~~~l--------~~~~--------~-~~v~gvd~s~~~~~~a~~~~--------~~~~~--~~~~ 116 (287)
T 1kpg_A 64 PGMTLLDVGCGWGATMMRA--------VEKY--------D-VNVVGLTLSKNQANHVQQLV--------ANSEN--LRSK 116 (287)
T ss_dssp TTCEEEEETCTTSHHHHHH--------HHHH--------C-CEEEEEESCHHHHHHHHHHH--------HTCCC--CSCE
T ss_pred CcCEEEEECCcccHHHHHH--------HHHc--------C-CEEEEEECCHHHHHHHHHHH--------HhcCC--CCCe
Confidence 4579999999999988753 2211 1 48889998654322221111 11111 1122
Q ss_pred -EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
+.. +++ .. +| +++|+++|..++|++.. +|+..+|+.
T Consensus 117 ~~~~---~d~-~~-~~-~~fD~v~~~~~l~~~~~-------------------------------------~~~~~~l~~ 153 (287)
T 1kpg_A 117 RVLL---AGW-EQ-FD-EPVDRIVSIGAFEHFGH-------------------------------------ERYDAFFSL 153 (287)
T ss_dssp EEEE---SCG-GG-CC-CCCSEEEEESCGGGTCT-------------------------------------TTHHHHHHH
T ss_pred EEEE---CCh-hh-CC-CCeeEEEEeCchhhcCh-------------------------------------HHHHHHHHH
Confidence 333 355 22 35 89999999999999742 123445677
Q ss_pred HHHHhccCceEEEEeecCCCCCCC-CCCchhHHHHHHHHHHHHHHcCccchhhhcccCcc-ccCCCHHHHHHHHhhcCce
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHV-DRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAH-FYAPSKEEIEGEVGREGSF 286 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~-~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P-~y~ps~eEv~~~i~~~gsf 286 (366)
-.+-|+|||++++..+...+.... ..+....+. ...+.+.+... ..| ...|+++++.+.+++.| |
T Consensus 154 ~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~----------~~~~~~~~s~~~~~~~l~~aG-f 220 (287)
T 1kpg_A 154 AHRLLPADGVMLLHTITGLHPKEIHERGLPMSFT--FARFLKFIVTE----------IFPGGRLPSIPMVQECASANG-F 220 (287)
T ss_dssp HHHHSCTTCEEEEEEEEECCHHHHTTTTCSCHHH--HHHHHHHHHHH----------TSTTCCCCCHHHHHHHHHTTT-C
T ss_pred HHHhcCCCCEEEEEEecCCCcccccccccccccc--ccchhhhHHhe----------eCCCCCCCCHHHHHHHHHhCC-c
Confidence 789999999999998876542100 000000001 11112211111 112 25679999999999999 9
Q ss_pred EEeeEEEE
Q 017747 287 KLDQLDMF 294 (366)
Q Consensus 287 ~i~~~e~~ 294 (366)
++.+.+.+
T Consensus 221 ~~~~~~~~ 228 (287)
T 1kpg_A 221 TVTRVQSL 228 (287)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEeC
Confidence 98776644
|
| >2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18 | Back alignment and structure |
|---|
Probab=99.05 E-value=2.4e-09 Score=100.74 Aligned_cols=153 Identities=14% Similarity=0.034 Sum_probs=96.8
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
....+|+|+|||+|..+..+. +.+ ..+++..|+........-+.+ ...+. ..+
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~--------~~~---------~~~v~gvD~s~~~~~~a~~~~--------~~~~~--~~~ 133 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLV--------RKF---------GVSIDCLNIAPVQNKRNEEYN--------NQAGL--ADN 133 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHH--------HHH---------CCEEEEEESCHHHHHHHHHHH--------HHHTC--TTT
T ss_pred CCCCEEEEeCCCCCHHHHHHH--------HHh---------CCEEEEEeCCHHHHHHHHHHH--------HhcCC--Ccc
Confidence 346799999999999987532 211 158889998654322221111 01111 112
Q ss_pred e-EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 129 ~-f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
+ |.. +++.+-.+|++++|++++..++||+.+ | ..+|+
T Consensus 134 ~~~~~---~d~~~~~~~~~~fD~v~~~~~l~~~~~-~--------------------------------------~~~l~ 171 (297)
T 2o57_A 134 ITVKY---GSFLEIPCEDNSYDFIWSQDAFLHSPD-K--------------------------------------LKVFQ 171 (297)
T ss_dssp EEEEE---CCTTSCSSCTTCEEEEEEESCGGGCSC-H--------------------------------------HHHHH
T ss_pred eEEEE---cCcccCCCCCCCEeEEEecchhhhcCC-H--------------------------------------HHHHH
Confidence 2 333 477665588999999999999999754 1 13456
Q ss_pred HHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceE
Q 017747 208 SRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFK 287 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~ 287 (366)
.-.+-|+|||++++..+...+..+. . .+...+..+ ..| .+++++++.+.+++.| |+
T Consensus 172 ~~~~~LkpgG~l~~~~~~~~~~~~~----~----~~~~~~~~~--------------~~~-~~~~~~~~~~~l~~aG-f~ 227 (297)
T 2o57_A 172 ECARVLKPRGVMAITDPMKEDGIDK----S----SIQPILDRI--------------KLH-DMGSLGLYRSLAKECG-LV 227 (297)
T ss_dssp HHHHHEEEEEEEEEEEEEECTTCCG----G----GGHHHHHHH--------------TCS-SCCCHHHHHHHHHHTT-EE
T ss_pred HHHHHcCCCeEEEEEEeccCCCCch----H----HHHHHHHHh--------------cCC-CCCCHHHHHHHHHHCC-Ce
Confidence 6689999999999998766543110 1 111222211 122 3579999999999999 99
Q ss_pred EeeEEEE
Q 017747 288 LDQLDMF 294 (366)
Q Consensus 288 i~~~e~~ 294 (366)
+.+.+.+
T Consensus 228 ~~~~~~~ 234 (297)
T 2o57_A 228 TLRTFSR 234 (297)
T ss_dssp EEEEEEC
T ss_pred EEEEEEC
Confidence 8776654
|
| >4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans} | Back alignment and structure |
|---|
Probab=99.05 E-value=1.1e-09 Score=102.50 Aligned_cols=103 Identities=17% Similarity=0.235 Sum_probs=69.9
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+..-+|+|+|||+|..|.. +.++ -.+|+..|+..++-... . + .++
T Consensus 38 ~~~~~vLDvGcGtG~~~~~--------l~~~----------~~~v~gvD~s~~ml~~a-----------~-----~-~~~ 82 (257)
T 4hg2_A 38 PARGDALDCGCGSGQASLG--------LAEF----------FERVHAVDPGEAQIRQA-----------L-----R-HPR 82 (257)
T ss_dssp SCSSEEEEESCTTTTTHHH--------HHTT----------CSEEEEEESCHHHHHTC-----------C-----C-CTT
T ss_pred CCCCCEEEEcCCCCHHHHH--------HHHh----------CCEEEEEeCcHHhhhhh-----------h-----h-cCC
Confidence 4457899999999999874 2221 15788999864321110 0 0 223
Q ss_pred e-EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 129 ~-f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
+ |.. +++.+-.+|++|+|+++++.++||+.. + .||+
T Consensus 83 v~~~~---~~~e~~~~~~~sfD~v~~~~~~h~~~~-~---------------------------------------~~~~ 119 (257)
T 4hg2_A 83 VTYAV---APAEDTGLPPASVDVAIAAQAMHWFDL-D---------------------------------------RFWA 119 (257)
T ss_dssp EEEEE---CCTTCCCCCSSCEEEEEECSCCTTCCH-H---------------------------------------HHHH
T ss_pred ceeeh---hhhhhhcccCCcccEEEEeeehhHhhH-H---------------------------------------HHHH
Confidence 3 444 466555589999999999999999731 1 2345
Q ss_pred HHHHHhccCceEEEEeecCCCC
Q 017747 208 SRSEELVVGGRMVLILLGRIGP 229 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~g~~~~ 229 (366)
.-++-|||||+|++...+....
T Consensus 120 e~~rvLkpgG~l~~~~~~~~~~ 141 (257)
T 4hg2_A 120 ELRRVARPGAVFAAVTYGLTRV 141 (257)
T ss_dssp HHHHHEEEEEEEEEEEECCCBC
T ss_pred HHHHHcCCCCEEEEEECCCCCC
Confidence 5578899999999998876553
|
| >3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A* | Back alignment and structure |
|---|
Probab=99.03 E-value=5.1e-09 Score=97.06 Aligned_cols=210 Identities=13% Similarity=0.046 Sum_probs=122.8
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+...+|+|+|||+|..+..+ .+ .+..+|+..|+.......+-+.+. ..+. .++
T Consensus 45 ~~~~~vLDiGcG~G~~~~~l--------a~---------~~~~~v~gvD~s~~~~~~a~~~~~--------~~~~--~~~ 97 (267)
T 3kkz_A 45 TEKSLIADIGCGTGGQTMVL--------AG---------HVTGQVTGLDFLSGFIDIFNRNAR--------QSGL--QNR 97 (267)
T ss_dssp CTTCEEEEETCTTCHHHHHH--------HT---------TCSSEEEEEESCHHHHHHHHHHHH--------HTTC--TTT
T ss_pred CCCCEEEEeCCCCCHHHHHH--------Hh---------ccCCEEEEEeCCHHHHHHHHHHHH--------HcCC--CcC
Confidence 34689999999999988642 11 134789999986543332222111 1111 122
Q ss_pred e-EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 129 ~-f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
+ |+. +++.+-.+|++++|+++|+.++|++ . | ..+|+
T Consensus 98 v~~~~---~d~~~~~~~~~~fD~i~~~~~~~~~-~-~--------------------------------------~~~l~ 134 (267)
T 3kkz_A 98 VTGIV---GSMDDLPFRNEELDLIWSEGAIYNI-G-F--------------------------------------ERGLN 134 (267)
T ss_dssp EEEEE---CCTTSCCCCTTCEEEEEESSCGGGT-C-H--------------------------------------HHHHH
T ss_pred cEEEE---cChhhCCCCCCCEEEEEEcCCceec-C-H--------------------------------------HHHHH
Confidence 2 443 4564444788999999999999997 2 1 12456
Q ss_pred HHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceE
Q 017747 208 SRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFK 287 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~ 287 (366)
.-.+-|+|||++++..+........ ..+...|.+- .| .+++.+++.+.+++.| |+
T Consensus 135 ~~~~~LkpgG~l~~~~~~~~~~~~~--------~~~~~~~~~~---------------~~-~~~~~~~~~~~l~~aG-f~ 189 (267)
T 3kkz_A 135 EWRKYLKKGGYLAVSECSWFTDERP--------AEINDFWMDA---------------YP-EIDTIPNQVAKIHKAG-YL 189 (267)
T ss_dssp HHGGGEEEEEEEEEEEEEESSSCCC--------HHHHHHHHHH---------------CT-TCEEHHHHHHHHHHTT-EE
T ss_pred HHHHHcCCCCEEEEEEeeecCCCCh--------HHHHHHHHHh---------------CC-CCCCHHHHHHHHHHCC-CE
Confidence 6689999999999998764332110 1233334321 12 4679999999999999 99
Q ss_pred EeeEEEEe-eccCCCCcccchhhhHhhhHHHhhhhHHHhhcCCCcchHHHHHHHHHHHHHHHHHhcCCCcEEEEEEEee
Q 017747 288 LDQLDMFQ-VERQGHDRGESYGSAVARTVRAIQESTIIHHFGIGEGVLDNLFEIYGRLVDEEMAKEEIKPLTFVLLLRK 365 (366)
Q Consensus 288 i~~~e~~~-~~~~~~~d~~~~~~~~~~~~Ra~~e~~l~~~~g~~~~i~d~lf~r~~~~~~~~~~~~~~~~~~~~~~l~k 365 (366)
+...+.+. ..|. ..+...+..+.+.+...+-. .+.+.++.++..+..+.. ......+...+..++|
T Consensus 190 ~v~~~~~~~~~w~---------~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~y~~~~~~~f~~~~~ 256 (267)
T 3kkz_A 190 PVATFILPENCWT---------DHYFTPKVAAQKIFLTKYAG--NKIAEEFSMLQSIEEELY-HKYKEYYGYTFFIAKK 256 (267)
T ss_dssp EEEEEECCGGGTT---------TTTHHHHHHHHHHHHHHTTT--CHHHHHHHHHHHHHHHHH-HHHTTTEEEEEEEEEE
T ss_pred EEEEEECCHhHHH---------HHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHH-HHhccccCeEeehhhH
Confidence 87766543 2241 12233344444444444333 445555555555433322 2233455566666665
|
| >3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei} | Back alignment and structure |
|---|
Probab=99.02 E-value=2.9e-09 Score=99.01 Aligned_cols=166 Identities=16% Similarity=0.170 Sum_probs=99.8
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+...+|+|+|||+|..+.. +.+. .|..+++..|+..+.....-+.+. ..+ .++
T Consensus 36 ~~~~~vLDiG~G~G~~~~~--------l~~~--------~~~~~v~~vD~s~~~~~~a~~~~~--------~~~---~~~ 88 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVI--------LAKN--------NPDAEITSIDISPESLEKARENTE--------KNG---IKN 88 (276)
T ss_dssp CTTCEEEETTCTTSHHHHH--------HHHH--------CTTSEEEEEESCHHHHHHHHHHHH--------HTT---CCS
T ss_pred CCCCeEEEecCCCCHHHHH--------HHHh--------CCCCEEEEEECCHHHHHHHHHHHH--------HcC---CCC
Confidence 4568999999999998864 3232 234789999986543332222111 111 122
Q ss_pred e-EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 129 ~-f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
+ |+. ++..+-.+|++++|+++++.++||+.+.+ .+|+
T Consensus 89 ~~~~~---~d~~~~~~~~~~fD~v~~~~~l~~~~~~~---------------------------------------~~l~ 126 (276)
T 3mgg_A 89 VKFLQ---ANIFSLPFEDSSFDHIFVCFVLEHLQSPE---------------------------------------EALK 126 (276)
T ss_dssp EEEEE---CCGGGCCSCTTCEEEEEEESCGGGCSCHH---------------------------------------HHHH
T ss_pred cEEEE---cccccCCCCCCCeeEEEEechhhhcCCHH---------------------------------------HHHH
Confidence 2 333 46666668899999999999999975521 2355
Q ss_pred HHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceE
Q 017747 208 SRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFK 287 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~ 287 (366)
.-.+-|+|||++++......+..... ......+.. ..+..+... ......+.+++..++++.| |+
T Consensus 127 ~~~~~L~pgG~l~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~------------~~~~~~~~~~l~~~l~~aG-f~ 191 (276)
T 3mgg_A 127 SLKKVLKPGGTITVIEGDHGSCYFHP-EGKKAIEAW-NCLIRVQAY------------MKGNSLVGRQIYPLLQESG-FE 191 (276)
T ss_dssp HHHHHEEEEEEEEEEEECGGGCEEES-CCHHHHHHH-HHHHHHHHH------------TTCCTTGGGGHHHHHHHTT-CE
T ss_pred HHHHHcCCCcEEEEEEcCCCCceECC-CcHHHHHHH-HHHHHHHHh------------cCCCcchHHHHHHHHHHCC-CC
Confidence 66789999999999876553321000 111111211 111211110 0112236689999999999 99
Q ss_pred EeeEEEEeecc
Q 017747 288 LDQLDMFQVER 298 (366)
Q Consensus 288 i~~~e~~~~~~ 298 (366)
+.+++....+.
T Consensus 192 ~v~~~~~~~~~ 202 (276)
T 3mgg_A 192 KIRVEPRMVYI 202 (276)
T ss_dssp EEEEEEEEEEE
T ss_pred eEEEeeEEEEC
Confidence 98888765543
|
| >3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=4e-09 Score=93.90 Aligned_cols=157 Identities=11% Similarity=0.068 Sum_probs=93.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+ .+. ..+++..|+........- . .+ ..++
T Consensus 46 ~~~~vLdiG~G~G~~~~~l--------~~~----------~~~v~~~D~s~~~~~~a~-----------~-~~---~~~~ 92 (218)
T 3ou2_A 46 IRGDVLELASGTGYWTRHL--------SGL----------ADRVTALDGSAEMIAEAG-----------R-HG---LDNV 92 (218)
T ss_dssp SCSEEEEESCTTSHHHHHH--------HHH----------SSEEEEEESCHHHHHHHG-----------G-GC---CTTE
T ss_pred CCCeEEEECCCCCHHHHHH--------Hhc----------CCeEEEEeCCHHHHHHHH-----------h-cC---CCCe
Confidence 3469999999999988753 221 167888888643221111 1 11 1222
Q ss_pred -EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
|+. +++.+ ++|++++|+++++.++||+.. .++..+|+.
T Consensus 93 ~~~~---~d~~~-~~~~~~~D~v~~~~~l~~~~~-------------------------------------~~~~~~l~~ 131 (218)
T 3ou2_A 93 EFRQ---QDLFD-WTPDRQWDAVFFAHWLAHVPD-------------------------------------DRFEAFWES 131 (218)
T ss_dssp EEEE---CCTTS-CCCSSCEEEEEEESCGGGSCH-------------------------------------HHHHHHHHH
T ss_pred EEEe---ccccc-CCCCCceeEEEEechhhcCCH-------------------------------------HHHHHHHHH
Confidence 333 45644 489999999999999999643 124456777
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchh-hhcccCccccCCCHHHHHHHHhhcCceE
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKE-KLVAYHAHFYAPSKEEIEGEVGREGSFK 287 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e-~~d~f~~P~y~ps~eEv~~~i~~~gsf~ 287 (366)
-.+-|+|||+++++..++.... +...+.....+.....- .-..+.....+++++|+.+.+++.| |+
T Consensus 132 ~~~~L~pgG~l~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG-f~ 198 (218)
T 3ou2_A 132 VRSAVAPGGVVEFVDVTDHERR------------LEQQDDSEPEVAVRRTLQDGRSFRIVKVFRSPAELTERLTALG-WS 198 (218)
T ss_dssp HHHHEEEEEEEEEEEECCCC------------------------CEEEEECTTSCEEEEECCCCCHHHHHHHHHHTT-EE
T ss_pred HHHHcCCCeEEEEEeCCCCccc------------cchhhhcccccceeeecCCcchhhHhhcCCCHHHHHHHHHHCC-CE
Confidence 8899999999999998874321 11111110001000000 0001112234789999999999999 99
Q ss_pred EeeEEE
Q 017747 288 LDQLDM 293 (366)
Q Consensus 288 i~~~e~ 293 (366)
++..+.
T Consensus 199 v~~~~~ 204 (218)
T 3ou2_A 199 CSVDEV 204 (218)
T ss_dssp EEEEEE
T ss_pred EEeeec
Confidence 876665
|
| >3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=98.99 E-value=1.6e-09 Score=100.54 Aligned_cols=194 Identities=14% Similarity=0.147 Sum_probs=112.3
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
....+|+|+|||+|..+..+. + +..+|+..|+....... ... . .+-
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~--------~----------~~~~v~gvD~s~~~~~~-----------a~~----~-~~~ 78 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALA--------N----------QGLFVYAVEPSIVMRQQ-----------AVV----H-PQV 78 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHH--------T----------TTCEEEEECSCHHHHHS-----------SCC----C-TTE
T ss_pred CCCCEEEEEcCcccHHHHHHH--------h----------CCCEEEEEeCCHHHHHH-----------HHh----c-cCC
Confidence 356899999999999886421 1 23789999986421110 000 0 111
Q ss_pred eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
.|.. +++.+-.+|++++|++++..++||+.+ +..+|+.
T Consensus 79 ~~~~---~d~~~~~~~~~~fD~v~~~~~l~~~~~---------------------------------------~~~~l~~ 116 (261)
T 3ege_A 79 EWFT---GYAENLALPDKSVDGVISILAIHHFSH---------------------------------------LEKSFQE 116 (261)
T ss_dssp EEEC---CCTTSCCSCTTCBSEEEEESCGGGCSS---------------------------------------HHHHHHH
T ss_pred EEEE---CchhhCCCCCCCEeEEEEcchHhhccC---------------------------------------HHHHHHH
Confidence 2333 466554478999999999999999733 2234566
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEE
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKL 288 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i 288 (366)
-.+-|+ ||++++.......... .+..+.+..... ....++++.+++. .+++.| |++
T Consensus 117 ~~~~Lk-gG~~~~~~~~~~~~~~-----~~~~~~~~~~~~----------------~~~~~~~~~~~~~-~l~~aG-F~~ 172 (261)
T 3ege_A 117 MQRIIR-DGTIVLLTFDIRLAQR-----IWLYDYFPFLWE----------------DALRFLPLDEQIN-LLQENT-KRR 172 (261)
T ss_dssp HHHHBC-SSCEEEEEECGGGCCC-----CGGGGTCHHHHH----------------HHHTSCCHHHHHH-HHHHHH-CSE
T ss_pred HHHHhC-CcEEEEEEcCCchhHH-----HHHHHHHHHHhh----------------hhhhhCCCHHHHH-HHHHcC-CCc
Confidence 789999 9999888876543211 111111111111 1123577899999 999999 988
Q ss_pred eeEEEEeeccCCC---Ccc--cchhhhHhhhHHHhhhhHHHhhcCCCcchHHHHHHHHHHHHH
Q 017747 289 DQLDMFQVERQGH---DRG--ESYGSAVARTVRAIQESTIIHHFGIGEGVLDNLFEIYGRLVD 346 (366)
Q Consensus 289 ~~~e~~~~~~~~~---~d~--~~~~~~~~~~~Ra~~e~~l~~~~g~~~~i~d~lf~r~~~~~~ 346 (366)
.+.+.+..++... .+. ...+..+-...+...+. + +.+. ++.++.+.+++.+.+.
T Consensus 173 v~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~--~~e~~~~~~~~~~~l~ 231 (261)
T 3ege_A 173 VEAIPFLLPHDLSDLFAAAAWRRPELYLKAEVRAGISS-F-ALAN--QDLVEKGLELLTADLN 231 (261)
T ss_dssp EEEEECCEETTCSBCCTTTTTTCGGGGGSHHHHHTSHH-H-HHSC--HHHHHHHHHHHHHHHH
T ss_pred eeEEEecCCCcCcchhhHHhccCchhhcCcchhccccc-e-eecC--HHHHHHHHHHHHHHHh
Confidence 8888876664332 111 11111111122222221 2 3345 6667777777766554
|
| >1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41 | Back alignment and structure |
|---|
Probab=98.98 E-value=1.4e-09 Score=100.29 Aligned_cols=156 Identities=16% Similarity=0.198 Sum_probs=96.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+ .++ . .+++..|+........-+.+ ...+ .+++
T Consensus 37 ~~~~vLDiGcG~G~~~~~l--------~~~--------~--~~v~gvD~s~~~l~~a~~~~--------~~~~---~~~v 87 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAF--------APF--------V--KKVVAFDLTEDILKVARAFI--------EGNG---HQQV 87 (260)
T ss_dssp SCCEEEEETCTTCHHHHHH--------GGG--------S--SEEEEEESCHHHHHHHHHHH--------HHTT---CCSE
T ss_pred CCCEEEEEeCCCCHHHHHH--------HHh--------C--CEEEEEeCCHHHHHHHHHHH--------HhcC---CCce
Confidence 4689999999999988642 111 1 38899998654322221111 1111 1222
Q ss_pred -EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
|.. +++.+-.+|++++|+++|+.++||+.+.+ .+|+.
T Consensus 88 ~~~~---~d~~~l~~~~~~fD~V~~~~~l~~~~d~~---------------------------------------~~l~~ 125 (260)
T 1vl5_A 88 EYVQ---GDAEQMPFTDERFHIVTCRIAAHHFPNPA---------------------------------------SFVSE 125 (260)
T ss_dssp EEEE---CCC-CCCSCTTCEEEEEEESCGGGCSCHH---------------------------------------HHHHH
T ss_pred EEEE---ecHHhCCCCCCCEEEEEEhhhhHhcCCHH---------------------------------------HHHHH
Confidence 333 46655558899999999999999975421 24566
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEE
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKL 288 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i 288 (366)
-.+-|+|||++++......+. ...+.....+..+. + .......+.+++.+.+++.| |++
T Consensus 126 ~~r~LkpgG~l~~~~~~~~~~--------~~~~~~~~~~~~~~----------~--~~~~~~~~~~~~~~~l~~aG-f~~ 184 (260)
T 1vl5_A 126 AYRVLKKGGQLLLVDNSAPEN--------DAFDVFYNYVEKER----------D--YSHHRAWKKSDWLKMLEEAG-FEL 184 (260)
T ss_dssp HHHHEEEEEEEEEEEEEBCSS--------HHHHHHHHHHHHHH----------C--TTCCCCCBHHHHHHHHHHHT-CEE
T ss_pred HHHHcCCCCEEEEEEcCCCCC--------HHHHHHHHHHHHhc----------C--ccccCCCCHHHHHHHHHHCC-CeE
Confidence 689999999999986654332 11221222222110 1 11234568999999999999 998
Q ss_pred eeEEEEeec
Q 017747 289 DQLDMFQVE 297 (366)
Q Consensus 289 ~~~e~~~~~ 297 (366)
..++.+..+
T Consensus 185 ~~~~~~~~~ 193 (260)
T 1vl5_A 185 EELHCFHKT 193 (260)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEeecc
Confidence 888776544
|
| >1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=2e-09 Score=98.45 Aligned_cols=157 Identities=17% Similarity=0.200 Sum_probs=96.6
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
....+|+|+|||+|..+..+ .+. . .+++..|+.......+-+.+. ..+ .++
T Consensus 20 ~~~~~vLDiGcG~G~~~~~l--------~~~--------~--~~v~~vD~s~~~~~~a~~~~~--------~~~---~~~ 70 (239)
T 1xxl_A 20 RAEHRVLDIGAGAGHTALAF--------SPY--------V--QECIGVDATKEMVEVASSFAQ--------EKG---VEN 70 (239)
T ss_dssp CTTCEEEEESCTTSHHHHHH--------GGG--------S--SEEEEEESCHHHHHHHHHHHH--------HHT---CCS
T ss_pred CCCCEEEEEccCcCHHHHHH--------HHh--------C--CEEEEEECCHHHHHHHHHHHH--------HcC---CCC
Confidence 45689999999999988642 111 1 378888986533222211111 111 122
Q ss_pred e-EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 129 ~-f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
+ |.. +++..-.++++++|+++++.++||+.+. ..+|+
T Consensus 71 v~~~~---~d~~~~~~~~~~fD~v~~~~~l~~~~~~---------------------------------------~~~l~ 108 (239)
T 1xxl_A 71 VRFQQ---GTAESLPFPDDSFDIITCRYAAHHFSDV---------------------------------------RKAVR 108 (239)
T ss_dssp EEEEE---CBTTBCCSCTTCEEEEEEESCGGGCSCH---------------------------------------HHHHH
T ss_pred eEEEe---cccccCCCCCCcEEEEEECCchhhccCH---------------------------------------HHHHH
Confidence 2 333 4564544788999999999999997542 13456
Q ss_pred HHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceE
Q 017747 208 SRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFK 287 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~ 287 (366)
.-.+-|+|||++++......+. ...+.+...+..+ . +. ......+.+++.+.+++.| |+
T Consensus 109 ~~~~~LkpgG~l~~~~~~~~~~--------~~~~~~~~~~~~~-~---------~~--~~~~~~~~~~~~~ll~~aG-f~ 167 (239)
T 1xxl_A 109 EVARVLKQDGRFLLVDHYAPED--------PVLDEFVNHLNRL-R---------DP--SHVRESSLSEWQAMFSANQ-LA 167 (239)
T ss_dssp HHHHHEEEEEEEEEEEECBCSS--------HHHHHHHHHHHHH-H---------CT--TCCCCCBHHHHHHHHHHTT-EE
T ss_pred HHHHHcCCCcEEEEEEcCCCCC--------hhHHHHHHHHHHh-c---------cc--cccCCCCHHHHHHHHHHCC-Cc
Confidence 6688999999999987654331 1122222222211 0 11 1134468999999999999 99
Q ss_pred EeeEEEEeec
Q 017747 288 LDQLDMFQVE 297 (366)
Q Consensus 288 i~~~e~~~~~ 297 (366)
+..++.+..+
T Consensus 168 ~~~~~~~~~~ 177 (239)
T 1xxl_A 168 YQDIQKWNLP 177 (239)
T ss_dssp EEEEEEEEEE
T ss_pred EEEEEeecCc
Confidence 8887776544
|
| >3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=98.92 E-value=1.1e-08 Score=92.77 Aligned_cols=143 Identities=13% Similarity=0.132 Sum_probs=95.0
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce-
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV- 129 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~- 129 (366)
+.+|+|+|||+|..+..+ . .+..+|+..|+.......+-+.+... +. ..++
T Consensus 67 ~~~vLDiGcG~G~~~~~l--------~----------~~~~~v~gvD~s~~~~~~a~~~~~~~--------~~--~~~v~ 118 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAM--------A----------SPERFVVGLDISESALAKANETYGSS--------PK--AEYFS 118 (235)
T ss_dssp CEEEEEETCTTCHHHHHH--------C----------BTTEEEEEECSCHHHHHHHHHHHTTS--------GG--GGGEE
T ss_pred CCCEEEeCCCCCHHHHHH--------H----------hCCCeEEEEECCHHHHHHHHHHhhcc--------CC--CcceE
Confidence 469999999999998742 1 12378999998654333332222110 00 0122
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
|.. +++.+ +.|++++|+++++.++||++. .|...+|+.-
T Consensus 119 ~~~---~d~~~-~~~~~~fD~v~~~~~l~~~~~-------------------------------------~~~~~~l~~~ 157 (235)
T 3lcc_A 119 FVK---EDVFT-WRPTELFDLIFDYVFFCAIEP-------------------------------------EMRPAWAKSM 157 (235)
T ss_dssp EEC---CCTTT-CCCSSCEEEEEEESSTTTSCG-------------------------------------GGHHHHHHHH
T ss_pred EEE---Cchhc-CCCCCCeeEEEEChhhhcCCH-------------------------------------HHHHHHHHHH
Confidence 333 46643 557789999999999999741 1234567777
Q ss_pred HHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEe
Q 017747 210 SEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLD 289 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~ 289 (366)
.+-|+|||++++........ ...|.+..+.+++...+++.| |++.
T Consensus 158 ~~~LkpgG~l~~~~~~~~~~----------------------------------~~~~~~~~~~~~~~~~l~~~G-f~~~ 202 (235)
T 3lcc_A 158 YELLKPDGELITLMYPITDH----------------------------------VGGPPYKVDVSTFEEVLVPIG-FKAV 202 (235)
T ss_dssp HHHEEEEEEEEEEECCCSCC----------------------------------CSCSSCCCCHHHHHHHHGGGT-EEEE
T ss_pred HHHCCCCcEEEEEEeccccc----------------------------------CCCCCccCCHHHHHHHHHHcC-CeEE
Confidence 89999999999977544321 112445579999999999999 9998
Q ss_pred eEEEEeec
Q 017747 290 QLDMFQVE 297 (366)
Q Consensus 290 ~~e~~~~~ 297 (366)
.++.....
T Consensus 203 ~~~~~~~~ 210 (235)
T 3lcc_A 203 SVEENPHA 210 (235)
T ss_dssp EEEECTTC
T ss_pred EEEecCCc
Confidence 88776544
|
| >1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21 | Back alignment and structure |
|---|
Probab=98.92 E-value=5.3e-09 Score=95.81 Aligned_cols=149 Identities=14% Similarity=0.036 Sum_probs=90.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+ .+.. ..+++..|+........-+... ..+. ..++
T Consensus 36 ~~~~VLDiGcG~G~~~~~l--------a~~~---------~~~v~gvD~s~~~l~~a~~~~~--------~~~~--~~~v 88 (256)
T 1nkv_A 36 PGTRILDLGSGSGEMLCTW--------ARDH---------GITGTGIDMSSLFTAQAKRRAE--------ELGV--SERV 88 (256)
T ss_dssp TTCEEEEETCTTCHHHHHH--------HHHT---------CCEEEEEESCHHHHHHHHHHHH--------HTTC--TTTE
T ss_pred CCCEEEEECCCCCHHHHHH--------HHhc---------CCeEEEEeCCHHHHHHHHHHHH--------hcCC--Ccce
Confidence 4579999999999988753 2221 1578889986533222211111 1111 1122
Q ss_pred -EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
|.. +++.+-.+ ++++|+++|..++|++.+.+ .+|+.
T Consensus 89 ~~~~---~d~~~~~~-~~~fD~V~~~~~~~~~~~~~---------------------------------------~~l~~ 125 (256)
T 1nkv_A 89 HFIH---NDAAGYVA-NEKCDVAACVGATWIAGGFA---------------------------------------GAEEL 125 (256)
T ss_dssp EEEE---SCCTTCCC-SSCEEEEEEESCGGGTSSSH---------------------------------------HHHHH
T ss_pred EEEE---CChHhCCc-CCCCCEEEECCChHhcCCHH---------------------------------------HHHHH
Confidence 333 46654334 88999999999999976421 23455
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEE
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKL 288 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i 288 (366)
-.+-|+|||++++.......... . +.+...|. ......+++.+++.+.+++.| |++
T Consensus 126 ~~r~LkpgG~l~~~~~~~~~~~~-----~---~~~~~~~~---------------~~~~~~~~~~~~~~~~l~~aG-f~~ 181 (256)
T 1nkv_A 126 LAQSLKPGGIMLIGEPYWRQLPA-----T---EEIAQACG---------------VSSTSDFLTLPGLVGAFDDLG-YDV 181 (256)
T ss_dssp HTTSEEEEEEEEEEEEEETTCCS-----S---HHHHHTTT---------------CSCGGGSCCHHHHHHHHHTTT-BCC
T ss_pred HHHHcCCCeEEEEecCcccCCCC-----h---HHHHHHHh---------------cccccccCCHHHHHHHHHHCC-Cee
Confidence 58899999999998764432210 0 01111111 011236789999999999999 887
Q ss_pred eeEE
Q 017747 289 DQLD 292 (366)
Q Consensus 289 ~~~e 292 (366)
..+.
T Consensus 182 ~~~~ 185 (256)
T 1nkv_A 182 VEMV 185 (256)
T ss_dssp CEEE
T ss_pred EEEE
Confidence 6544
|
| >2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A | Back alignment and structure |
|---|
Probab=98.92 E-value=4e-09 Score=95.42 Aligned_cols=154 Identities=16% Similarity=0.165 Sum_probs=93.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+.. +.+ .. .+++..|+........-+..+ .+--
T Consensus 42 ~~~~vLDiGcG~G~~~~~--------l~~--------~~--~~v~gvD~s~~~~~~a~~~~~--------------~~v~ 89 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSR--------LQE--------HF--NDITCVEASEEAISHAQGRLK--------------DGIT 89 (250)
T ss_dssp CSSCEEEESCTTSHHHHH--------HTT--------TC--SCEEEEESCHHHHHHHHHHSC--------------SCEE
T ss_pred CCCcEEEECCCCCHHHHH--------HHH--------hC--CcEEEEeCCHHHHHHHHHhhh--------------CCeE
Confidence 356899999999998864 211 11 368888886532222211111 1112
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
|.. +++ ..++|++++|+++++.++|++.+. ..+|+.-
T Consensus 90 ~~~---~d~-~~~~~~~~fD~v~~~~~l~~~~~~---------------------------------------~~~l~~~ 126 (250)
T 2p7i_A 90 YIH---SRF-EDAQLPRRYDNIVLTHVLEHIDDP---------------------------------------VALLKRI 126 (250)
T ss_dssp EEE---SCG-GGCCCSSCEEEEEEESCGGGCSSH---------------------------------------HHHHHHH
T ss_pred EEE---ccH-HHcCcCCcccEEEEhhHHHhhcCH---------------------------------------HHHHHHH
Confidence 333 355 344789999999999999997541 1345566
Q ss_pred H-HHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhh----hcccCccccCCCHHHHHHHHhhcC
Q 017747 210 S-EELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEK----LVAYHAHFYAPSKEEIEGEVGREG 284 (366)
Q Consensus 210 a-~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~----~d~f~~P~y~ps~eEv~~~i~~~g 284 (366)
. +-|+|||+++++.+.... ...... . ..|.+.... .+....-..+.+++++.+.+++.|
T Consensus 127 ~~~~LkpgG~l~i~~~~~~~----------~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 190 (250)
T 2p7i_A 127 NDDWLAEGGRLFLVCPNANA----------VSRQIA-V-----KMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAG 190 (250)
T ss_dssp HHTTEEEEEEEEEEEECTTC----------HHHHHH-H-----HTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTT
T ss_pred HHHhcCCCCEEEEEcCChHH----------HHHHHH-H-----HcCccccchhcccccccccccccCCHHHHHHHHHHCC
Confidence 7 899999999999865532 111111 1 122222110 000111124579999999999999
Q ss_pred ceEEeeEEEEe
Q 017747 285 SFKLDQLDMFQ 295 (366)
Q Consensus 285 sf~i~~~e~~~ 295 (366)
|++.+.+.+.
T Consensus 191 -f~~~~~~~~~ 200 (250)
T 2p7i_A 191 -LQVTYRSGIF 200 (250)
T ss_dssp -CEEEEEEEEE
T ss_pred -CeEEEEeeeE
Confidence 9998776543
|
| >3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=98.91 E-value=2e-08 Score=90.98 Aligned_cols=150 Identities=21% Similarity=0.226 Sum_probs=96.3
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+...+|+|+|||+|..+..+ .+. ..+++..|+.......+-+.. .. .+-
T Consensus 52 ~~~~~vLDiG~G~G~~~~~l--------~~~----------~~~v~~vD~s~~~~~~a~~~~------------~~-~~~ 100 (242)
T 3l8d_A 52 KKEAEVLDVGCGDGYGTYKL--------SRT----------GYKAVGVDISEVMIQKGKERG------------EG-PDL 100 (242)
T ss_dssp CTTCEEEEETCTTSHHHHHH--------HHT----------TCEEEEEESCHHHHHHHHTTT------------CB-TTE
T ss_pred CCCCeEEEEcCCCCHHHHHH--------HHc----------CCeEEEEECCHHHHHHHHhhc------------cc-CCc
Confidence 34679999999999988642 221 267888898643222111111 00 112
Q ss_pred eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
.|+. +++.+-.+|++++|+++++.++||+.+. ..+|+.
T Consensus 101 ~~~~---~d~~~~~~~~~~fD~v~~~~~l~~~~~~---------------------------------------~~~l~~ 138 (242)
T 3l8d_A 101 SFIK---GDLSSLPFENEQFEAIMAINSLEWTEEP---------------------------------------LRALNE 138 (242)
T ss_dssp EEEE---CBTTBCSSCTTCEEEEEEESCTTSSSCH---------------------------------------HHHHHH
T ss_pred eEEE---cchhcCCCCCCCccEEEEcChHhhccCH---------------------------------------HHHHHH
Confidence 2343 3555555789999999999999997331 134566
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEE
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKL 288 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i 288 (366)
-.+-|+|||+++++..+...... ...+. ............+++++...+++.| |++
T Consensus 139 ~~~~L~pgG~l~i~~~~~~~~~~------------~~~~~-----------~~~~~~~~~~~~~~~~~~~~l~~~G-f~~ 194 (242)
T 3l8d_A 139 IKRVLKSDGYACIAILGPTAKPR------------ENSYP-----------RLYGKDVVCNTMMPWEFEQLVKEQG-FKV 194 (242)
T ss_dssp HHHHEEEEEEEEEEEECTTCGGG------------GGGGG-----------GGGTCCCSSCCCCHHHHHHHHHHTT-EEE
T ss_pred HHHHhCCCeEEEEEEcCCcchhh------------hhhhh-----------hhccccccccCCCHHHHHHHHHHcC-CEE
Confidence 78999999999999976654210 00000 0112233556789999999999999 999
Q ss_pred eeEEEEe
Q 017747 289 DQLDMFQ 295 (366)
Q Consensus 289 ~~~e~~~ 295 (366)
.+.+.+.
T Consensus 195 ~~~~~~~ 201 (242)
T 3l8d_A 195 VDGIGVY 201 (242)
T ss_dssp EEEEEEE
T ss_pred EEeeccc
Confidence 7776553
|
| >1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42 | Back alignment and structure |
|---|
Probab=98.90 E-value=7.3e-09 Score=94.67 Aligned_cols=144 Identities=17% Similarity=0.184 Sum_probs=92.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+. ++ + ..+++..|+.......+-+.+.. ..++
T Consensus 93 ~~~~vLDiG~G~G~~~~~l~--------~~-----~----~~~v~~vD~s~~~~~~a~~~~~~-------------~~~~ 142 (254)
T 1xtp_A 93 GTSRALDCGAGIGRITKNLL--------TK-----L----YATTDLLEPVKHMLEEAKRELAG-------------MPVG 142 (254)
T ss_dssp CCSEEEEETCTTTHHHHHTH--------HH-----H----CSEEEEEESCHHHHHHHHHHTTT-------------SSEE
T ss_pred CCCEEEEECCCcCHHHHHHH--------Hh-----h----cCEEEEEeCCHHHHHHHHHHhcc-------------CCce
Confidence 46899999999999887532 21 1 14688888764322222221110 1122
Q ss_pred -EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
|.. +++..-.+|++++|+++++.++|+++. .|+..+|+.
T Consensus 143 ~~~~---~d~~~~~~~~~~fD~v~~~~~l~~~~~-------------------------------------~~~~~~l~~ 182 (254)
T 1xtp_A 143 KFIL---ASMETATLPPNTYDLIVIQWTAIYLTD-------------------------------------ADFVKFFKH 182 (254)
T ss_dssp EEEE---SCGGGCCCCSSCEEEEEEESCGGGSCH-------------------------------------HHHHHHHHH
T ss_pred EEEE---ccHHHCCCCCCCeEEEEEcchhhhCCH-------------------------------------HHHHHHHHH
Confidence 333 466554578899999999999999632 245567788
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEE
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKL 288 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i 288 (366)
-.+-|+|||++++......... .+ .....+.+.++.+++++.+++.| |++
T Consensus 183 ~~~~LkpgG~l~i~~~~~~~~~-------~~----------------------~~~~~~~~~~~~~~~~~~l~~aG-f~~ 232 (254)
T 1xtp_A 183 CQQALTPNGYIFFKENCSTGDR-------FL----------------------VDKEDSSLTRSDIHYKRLFNESG-VRV 232 (254)
T ss_dssp HHHHEEEEEEEEEEEEBC--CC-------EE----------------------EETTTTEEEBCHHHHHHHHHHHT-CCE
T ss_pred HHHhcCCCeEEEEEecCCCccc-------ce----------------------ecccCCcccCCHHHHHHHHHHCC-CEE
Confidence 8899999999999875332110 00 00122345679999999999999 988
Q ss_pred eeEEE
Q 017747 289 DQLDM 293 (366)
Q Consensus 289 ~~~e~ 293 (366)
.+.+.
T Consensus 233 ~~~~~ 237 (254)
T 1xtp_A 233 VKEAF 237 (254)
T ss_dssp EEEEE
T ss_pred EEeee
Confidence 66654
|
| >2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca} | Back alignment and structure |
|---|
Probab=98.90 E-value=2.2e-08 Score=94.31 Aligned_cols=159 Identities=16% Similarity=0.126 Sum_probs=96.0
Q ss_pred CceEEEeecCCC---CcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCC
Q 017747 50 KTINIADLGCSS---GPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSS 126 (366)
Q Consensus 50 ~~~~IaDlGCs~---G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~ 126 (366)
...+|+|+|||+ |..+.. +.+. .|..+|+..|+....-...-+.+. .. .
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~--------~~~~--------~p~~~v~~vD~sp~~l~~Ar~~~~-----------~~-~ 128 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEV--------AQSV--------NPDARVVYVDIDPMVLTHGRALLA-----------KD-P 128 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHH--------HHHH--------CTTCEEEEEESSHHHHHHHHHHHT-----------TC-T
T ss_pred CCCEEEEECCCCCCCChHHHH--------HHHh--------CCCCEEEEEECChHHHHHHHHhcC-----------CC-C
Confidence 347999999999 954421 2222 245899999986433222221111 10 1
Q ss_pred CceEEeccCCCccc-----------ccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHH
Q 017747 127 PSVYIAGYPGSFYG-----------RLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYF 195 (366)
Q Consensus 127 ~~~f~~~vpgSFy~-----------~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~ 195 (366)
+-.|+. +++.+ ..++.+++|+++++.++||+++-
T Consensus 129 ~v~~~~---~D~~~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~-------------------------------- 173 (274)
T 2qe6_A 129 NTAVFT---ADVRDPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPD-------------------------------- 173 (274)
T ss_dssp TEEEEE---CCTTCHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTT--------------------------------
T ss_pred CeEEEE---eeCCCchhhhccchhhccCCCCCCEEEEEechhhhCCcH--------------------------------
Confidence 223444 46643 23565789999999999998652
Q ss_pred HHHHHHHHHHHHHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHH
Q 017747 196 KQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEE 275 (366)
Q Consensus 196 ~Q~~~D~~~FL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eE 275 (366)
+...+|+.-++-|+|||+|+++.+..+. + . .++.+...+.. . ..|.++++.+|
T Consensus 174 -----~~~~~l~~~~~~L~pGG~l~i~~~~~~~--~-----~-~~~~~~~~~~~---~-----------~~~~~~~s~~e 226 (274)
T 2qe6_A 174 -----VVDRVVGAYRDALAPGSYLFMTSLVDTG--L-----P-AQQKLARITRE---N-----------LGEGWARTPEE 226 (274)
T ss_dssp -----THHHHHHHHHHHSCTTCEEEEEEEBCSS--C-----H-HHHHHHHHHHH---H-----------HSCCCCBCHHH
T ss_pred -----HHHHHHHHHHHhCCCCcEEEEEEecCcc--h-----H-HHHHHHHHHHh---c-----------CCCCccCCHHH
Confidence 1223466778899999999999987642 1 0 11222222221 1 13678899999
Q ss_pred HHHHHhhcCceEEeeEEEEe-eccCCC
Q 017747 276 IEGEVGREGSFKLDQLDMFQ-VERQGH 301 (366)
Q Consensus 276 v~~~i~~~gsf~i~~~e~~~-~~~~~~ 301 (366)
+.+.+ .| |++....... ..|.+.
T Consensus 227 i~~~l--~G-~~l~~~g~~~~~~w~p~ 250 (274)
T 2qe6_A 227 IERQF--GD-FELVEPGVVYTALWRPD 250 (274)
T ss_dssp HHHTT--TT-CEECTTCSEEGGGSSCS
T ss_pred HHHHh--CC-CeEccCcEeccccccCC
Confidence 99999 47 8876644433 236554
|
| >1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36 | Back alignment and structure |
|---|
Probab=98.90 E-value=3.7e-09 Score=94.74 Aligned_cols=151 Identities=7% Similarity=0.060 Sum_probs=92.0
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcC-----C
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERG-----G 123 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~-----~ 123 (366)
+...+|+|+|||+|.++.. +.++ | .+|+..|+....-....+....... . ...+ .
T Consensus 21 ~~~~~vLD~GCG~G~~~~~--------la~~-----g-----~~V~gvD~S~~~l~~a~~~~~~~~~-~-~~~~~~~~~~ 80 (203)
T 1pjz_A 21 VPGARVLVPLCGKSQDMSW--------LSGQ-----G-----YHVVGAELSEAAVERYFTERGEQPH-I-TSQGDFKVYA 80 (203)
T ss_dssp CTTCEEEETTTCCSHHHHH--------HHHH-----C-----CEEEEEEECHHHHHHHHHHHCSCSE-E-EEETTEEEEE
T ss_pred CCCCEEEEeCCCCcHhHHH--------HHHC-----C-----CeEEEEeCCHHHHHHHHHHccCCcc-c-cccccccccc
Confidence 3468999999999999875 3222 1 6899999987654443322110000 0 0000 0
Q ss_pred CCCCceEEeccCCCcccccCCC-CcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHH
Q 017747 124 GSSPSVYIAGYPGSFYGRLFPN-NSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDF 202 (366)
Q Consensus 124 ~~~~~~f~~~vpgSFy~~lfp~-~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~ 202 (366)
. .+--|.. +++.+-.+++ +++|++++..++|++.. .|.
T Consensus 81 ~-~~v~~~~---~d~~~l~~~~~~~fD~v~~~~~l~~l~~-------------------------------------~~~ 119 (203)
T 1pjz_A 81 A-PGIEIWC---GDFFALTARDIGHCAAFYDRAAMIALPA-------------------------------------DMR 119 (203)
T ss_dssp C-SSSEEEE---ECCSSSTHHHHHSEEEEEEESCGGGSCH-------------------------------------HHH
T ss_pred C-CccEEEE---CccccCCcccCCCEEEEEECcchhhCCH-------------------------------------HHH
Confidence 0 1123444 3664443444 79999999999999631 123
Q ss_pred HHHHHHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhh
Q 017747 203 TLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGR 282 (366)
Q Consensus 203 ~~FL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~ 282 (366)
..+|+.-++-|+|||++++.....+.. ...-|.+..+.+|+++.++.
T Consensus 120 ~~~l~~~~r~LkpgG~~~l~~~~~~~~---------------------------------~~~~~~~~~~~~el~~~~~~ 166 (203)
T 1pjz_A 120 ERYVQHLEALMPQACSGLLITLEYDQA---------------------------------LLEGPPFSVPQTWLHRVMSG 166 (203)
T ss_dssp HHHHHHHHHHSCSEEEEEEEEESSCSS---------------------------------SSSSCCCCCCHHHHHHTSCS
T ss_pred HHHHHHHHHHcCCCcEEEEEEEecCcc---------------------------------ccCCCCCCCCHHHHHHHhcC
Confidence 456677789999999966665432210 01123345789999999998
Q ss_pred cCceEEeeEEEEe
Q 017747 283 EGSFKLDQLDMFQ 295 (366)
Q Consensus 283 ~gsf~i~~~e~~~ 295 (366)
| |++..++...
T Consensus 167 -g-f~i~~~~~~~ 177 (203)
T 1pjz_A 167 -N-WEVTKVGGQD 177 (203)
T ss_dssp -S-EEEEEEEESS
T ss_pred -C-cEEEEecccc
Confidence 7 9987777644
|
| >3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei} | Back alignment and structure |
|---|
Probab=98.90 E-value=8.5e-08 Score=88.78 Aligned_cols=168 Identities=7% Similarity=0.002 Sum_probs=95.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCC------chhHHHhhCchhHHHHhhhcCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTN------DFNSVFKALPDFHRQLRNERGG 123 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~N------DFn~lf~~l~~~~~~~~~~~~~ 123 (366)
...+|+|+|||+|..+..+ .++. .|..+++..|+... .....-+.+. . .+.
T Consensus 43 ~~~~vLDiGcG~G~~~~~l--------~~~~-------g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~-------~-~~~ 99 (275)
T 3bkx_A 43 PGEKILEIGCGQGDLSAVL--------ADQV-------GSSGHVTGIDIASPDYGAPLTLGQAWNHLL-------A-GPL 99 (275)
T ss_dssp TTCEEEEESCTTSHHHHHH--------HHHH-------CTTCEEEEECSSCTTCCSSSCHHHHHHHHH-------T-STT
T ss_pred CCCEEEEeCCCCCHHHHHH--------HHHh-------CCCCEEEEEECCccccccHHHHHHHHHHHH-------h-cCC
Confidence 4579999999999998753 2221 23478999999764 3332222111 0 010
Q ss_pred CCCCceEEeccCCC-cc--cccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHH
Q 017747 124 GSSPSVYIAGYPGS-FY--GRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQE 200 (366)
Q Consensus 124 ~~~~~~f~~~vpgS-Fy--~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~ 200 (366)
..++-+ +.++ +. ...++++++|+++|+.++|++.+..
T Consensus 100 --~~~v~~--~~~d~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~------------------------------------ 139 (275)
T 3bkx_A 100 --GDRLTV--HFNTNLSDDLGPIADQHFDRVVLAHSLWYFASAN------------------------------------ 139 (275)
T ss_dssp --GGGEEE--ECSCCTTTCCGGGTTCCCSEEEEESCGGGSSCHH------------------------------------
T ss_pred --CCceEE--EECChhhhccCCCCCCCEEEEEEccchhhCCCHH------------------------------------
Confidence 012322 2233 43 2236789999999999999975421
Q ss_pred HHHHHHHHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHH
Q 017747 201 DFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEV 280 (366)
Q Consensus 201 D~~~FL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i 280 (366)
.+++...+-++|||++++.........+. ....++..+...+-... ..+.......++|++++.+.+
T Consensus 140 ---~~~~~~~~l~~~gG~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~s~~~l~~~l 206 (275)
T 3bkx_A 140 ---ALALLFKNMAAVCDHVDVAEWSMQPTALD--QIGHLQAAMIQGLLYAI--------APSDVANIRTLITPDTLAQIA 206 (275)
T ss_dssp ---HHHHHHHHHTTTCSEEEEEEECSSCSSGG--GHHHHHHHHHHHHHHHH--------SCCTTCSCCCCCCHHHHHHHH
T ss_pred ---HHHHHHHHHhCCCCEEEEEEecCCCCchh--hhhHHHHHHHHHHHhhc--------cccccccccccCCHHHHHHHH
Confidence 12333344455699999998776543211 11111221211111110 011223344689999999999
Q ss_pred hhcCceEEeeEEEE
Q 017747 281 GREGSFKLDQLDMF 294 (366)
Q Consensus 281 ~~~gsf~i~~~e~~ 294 (366)
++.| |++.+.+.+
T Consensus 207 ~~aG-f~~~~~~~~ 219 (275)
T 3bkx_A 207 HDNT-WTYTAGTIV 219 (275)
T ss_dssp HHHT-CEEEECCCB
T ss_pred HHCC-CeeEEEEEe
Confidence 9999 999777766
|
| >3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.89 E-value=2.5e-08 Score=89.19 Aligned_cols=145 Identities=16% Similarity=0.155 Sum_probs=94.7
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
....+|+|+|||+|..+..+ .+.. .|..+++..|+.......+-+.+. . .+ ..+
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l--------~~~~-------~~~~~v~~vD~s~~~~~~a~~~~~-------~-~~---~~~ 89 (219)
T 3dh0_A 36 KEGMTVLDVGTGAGFYLPYL--------SKMV-------GEKGKVYAIDVQEEMVNYAWEKVN-------K-LG---LKN 89 (219)
T ss_dssp CTTCEEEESSCTTCTTHHHH--------HHHH-------TTTCEEEEEESCHHHHHHHHHHHH-------H-HT---CTT
T ss_pred CCCCEEEEEecCCCHHHHHH--------HHHh-------CCCcEEEEEECCHHHHHHHHHHHH-------H-cC---CCc
Confidence 34579999999999998753 2221 234789999986543332222111 1 11 122
Q ss_pred e-EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 129 ~-f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
+ |.. +++..-.++++++|+++++.++||+.+. ..+|+
T Consensus 90 ~~~~~---~d~~~~~~~~~~fD~v~~~~~l~~~~~~---------------------------------------~~~l~ 127 (219)
T 3dh0_A 90 VEVLK---SEENKIPLPDNTVDFIFMAFTFHELSEP---------------------------------------LKFLE 127 (219)
T ss_dssp EEEEE---CBTTBCSSCSSCEEEEEEESCGGGCSSH---------------------------------------HHHHH
T ss_pred EEEEe---cccccCCCCCCCeeEEEeehhhhhcCCH---------------------------------------HHHHH
Confidence 2 333 4555555889999999999999997431 23456
Q ss_pred HHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceE
Q 017747 208 SRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFK 287 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~ 287 (366)
.-.+-|+|||++++.......... + .......+.+++...+++.| |+
T Consensus 128 ~~~~~LkpgG~l~i~~~~~~~~~~----------------------~----------~~~~~~~~~~~~~~~l~~~G-f~ 174 (219)
T 3dh0_A 128 ELKRVAKPFAYLAIIDWKKEERDK----------------------G----------PPPEEVYSEWEVGLILEDAG-IR 174 (219)
T ss_dssp HHHHHEEEEEEEEEEEECSSCCSS----------------------S----------CCGGGSCCHHHHHHHHHHTT-CE
T ss_pred HHHHHhCCCeEEEEEEeccccccc----------------------C----------CchhcccCHHHHHHHHHHCC-CE
Confidence 668899999999998766543210 0 11223468999999999999 98
Q ss_pred EeeEEEE
Q 017747 288 LDQLDMF 294 (366)
Q Consensus 288 i~~~e~~ 294 (366)
+.+...+
T Consensus 175 ~~~~~~~ 181 (219)
T 3dh0_A 175 VGRVVEV 181 (219)
T ss_dssp EEEEEEE
T ss_pred EEEEEee
Confidence 8766544
|
| >2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A* | Back alignment and structure |
|---|
Probab=98.88 E-value=7.9e-08 Score=91.35 Aligned_cols=162 Identities=15% Similarity=0.189 Sum_probs=94.4
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+ .+.+ ..+|+..|+........-+.+ ...+. ..++
T Consensus 90 ~~~~vLDiGcG~G~~~~~l--------a~~~---------~~~v~gvD~s~~~~~~a~~~~--------~~~~~--~~~v 142 (318)
T 2fk8_A 90 PGMTLLDIGCGWGTTMRRA--------VERF---------DVNVIGLTLSKNQHARCEQVL--------ASIDT--NRSR 142 (318)
T ss_dssp TTCEEEEESCTTSHHHHHH--------HHHH---------CCEEEEEESCHHHHHHHHHHH--------HTSCC--SSCE
T ss_pred CcCEEEEEcccchHHHHHH--------HHHC---------CCEEEEEECCHHHHHHHHHHH--------HhcCC--CCce
Confidence 4579999999999988653 2221 158889998654322221111 11111 1122
Q ss_pred -EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
+.. +++ ..+ | +++|++++..++|++.. .|...+|+.
T Consensus 143 ~~~~---~d~-~~~-~-~~fD~v~~~~~l~~~~~-------------------------------------~~~~~~l~~ 179 (318)
T 2fk8_A 143 QVLL---QGW-EDF-A-EPVDRIVSIEAFEHFGH-------------------------------------ENYDDFFKR 179 (318)
T ss_dssp EEEE---SCG-GGC-C-CCCSEEEEESCGGGTCG-------------------------------------GGHHHHHHH
T ss_pred EEEE---CCh-HHC-C-CCcCEEEEeChHHhcCH-------------------------------------HHHHHHHHH
Confidence 333 344 232 4 89999999999999742 133455677
Q ss_pred HHHHhccCceEEEEeecCCCCCCC-CCCchhHHHHHHHHHHHHHHcCccchhhhcccCcc-ccCCCHHHHHHHHhhcCce
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHV-DRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAH-FYAPSKEEIEGEVGREGSF 286 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~-~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P-~y~ps~eEv~~~i~~~gsf 286 (366)
-.+-|+|||++++..+...+.... .......++ ...+.+...+ ...| .+.|+.+++.+.+++.| |
T Consensus 180 ~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~----------~~~~~~~~~s~~~~~~~l~~aG-f 246 (318)
T 2fk8_A 180 CFNIMPADGRMTVQSSVSYHPYEMAARGKKLSFE--TARFIKFIVT----------EIFPGGRLPSTEMMVEHGEKAG-F 246 (318)
T ss_dssp HHHHSCTTCEEEEEEEECCCHHHHHTTCHHHHHH--HHHHHHHHHH----------HTSTTCCCCCHHHHHHHHHHTT-C
T ss_pred HHHhcCCCcEEEEEEeccCCchhhhhcccccccc--ccchhhHHHH----------hcCCCCcCCCHHHHHHHHHhCC-C
Confidence 789999999999998877542100 000000000 1111121111 1123 46689999999999999 9
Q ss_pred EEeeEEEE
Q 017747 287 KLDQLDMF 294 (366)
Q Consensus 287 ~i~~~e~~ 294 (366)
++...+.+
T Consensus 247 ~~~~~~~~ 254 (318)
T 2fk8_A 247 TVPEPLSL 254 (318)
T ss_dssp BCCCCEEC
T ss_pred EEEEEEec
Confidence 88766554
|
| >3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=98.88 E-value=6.9e-09 Score=92.08 Aligned_cols=159 Identities=12% Similarity=0.080 Sum_probs=93.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
++.+|+|+|||+|..+..+ .++ +..+++..|+.......+-+.+. ..+.. .+-.
T Consensus 43 ~~~~vLdiG~G~G~~~~~l--------~~~---------~~~~v~~~D~s~~~~~~a~~~~~--------~~~~~-~~~~ 96 (219)
T 3dlc_A 43 TAGTCIDIGSGPGALSIAL--------AKQ---------SDFSIRALDFSKHMNEIALKNIA--------DANLN-DRIQ 96 (219)
T ss_dssp CEEEEEEETCTTSHHHHHH--------HHH---------SEEEEEEEESCHHHHHHHHHHHH--------HTTCT-TTEE
T ss_pred CCCEEEEECCCCCHHHHHH--------HHc---------CCCeEEEEECCHHHHHHHHHHHH--------hcccc-CceE
Confidence 3459999999999988642 221 23789999986533222221111 11110 1122
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
|.. +++.+-.+|++++|+++++.++||+.+ ...+|+.-
T Consensus 97 ~~~---~d~~~~~~~~~~~D~v~~~~~l~~~~~---------------------------------------~~~~l~~~ 134 (219)
T 3dlc_A 97 IVQ---GDVHNIPIEDNYADLIVSRGSVFFWED---------------------------------------VATAFREI 134 (219)
T ss_dssp EEE---CBTTBCSSCTTCEEEEEEESCGGGCSC---------------------------------------HHHHHHHH
T ss_pred EEE---cCHHHCCCCcccccEEEECchHhhccC---------------------------------------HHHHHHHH
Confidence 333 466554588999999999999999733 12346667
Q ss_pred HHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEe
Q 017747 210 SEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLD 289 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~ 289 (366)
.+-|+|||++++...-... .+.+.+...+.... .+ ....+.......+.+++.+.+++.| |++.
T Consensus 135 ~~~L~pgG~l~~~~~~~~~---------~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~l~~aG-f~~v 198 (219)
T 3dlc_A 135 YRILKSGGKTYIGGGFGNK---------ELRDSISAEMIRKN-PD-----WKEFNRKNISQENVERFQNVLDEIG-ISSY 198 (219)
T ss_dssp HHHEEEEEEEEEEECCSSH---------HHHHHHHHHHHHHC-TT-----HHHHHHHHSSHHHHHHHHHHHHHHT-CSSE
T ss_pred HHhCCCCCEEEEEeccCcH---------HHHHHHHHHHHHhH-HH-----HHhhhhhccccCCHHHHHHHHHHcC-CCeE
Confidence 8999999999997532221 12233333333220 00 0001111223348899999999999 8775
Q ss_pred eEE
Q 017747 290 QLD 292 (366)
Q Consensus 290 ~~e 292 (366)
++.
T Consensus 199 ~~~ 201 (219)
T 3dlc_A 199 EII 201 (219)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
|
| >3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=4.9e-09 Score=99.78 Aligned_cols=171 Identities=16% Similarity=0.180 Sum_probs=98.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+ .+ .+..+++..|+........-+...... .........+-.
T Consensus 34 ~~~~VLDlGcG~G~~~~~l--------~~---------~~~~~v~gvD~s~~~l~~a~~~~~~~~---~~~~~~~~~~~~ 93 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKW--------KK---------GRINKLVCTDIADVSVKQCQQRYEDMK---NRRDSEYIFSAE 93 (313)
T ss_dssp -CCEEEEETCTTTTTHHHH--------HH---------TTCSEEEEEESCHHHHHHHHHHHHHHH---SSSCC-CCCEEE
T ss_pred CCCEEEEECCCCcHHHHHH--------Hh---------cCCCEEEEEeCCHHHHHHHHHHHHHhh---hcccccccceEE
Confidence 4679999999999988642 22 123689999987654333322211100 000000001122
Q ss_pred EEeccCCCccccc----CC--CCcccEEEcccccccc-cCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRL----FP--NNSLHFIHSSNSLHWL-SKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDF 202 (366)
Q Consensus 130 f~~~vpgSFy~~l----fp--~~s~~~~~S~~alhWl-s~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~ 202 (366)
|+.+ +...-. ++ ++++|+++|+.++||+ .. ..|.
T Consensus 94 ~~~~---D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~------------------------------------~~~~ 134 (313)
T 3bgv_A 94 FITA---DSSKELLIDKFRDPQMCFDICSCQFVCHYSFES------------------------------------YEQA 134 (313)
T ss_dssp EEEC---CTTTSCSTTTCSSTTCCEEEEEEETCGGGGGGS------------------------------------HHHH
T ss_pred EEEe---cccccchhhhcccCCCCEEEEEEecchhhccCC------------------------------------HHHH
Confidence 4443 443322 43 5699999999999997 32 1245
Q ss_pred HHHHHHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHH--cC-------ccchhhh------------
Q 017747 203 TLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVS--QG-------EIEKEKL------------ 261 (366)
Q Consensus 203 ~~FL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~--eG-------~i~~e~~------------ 261 (366)
..+|+.-++-|+|||++++++++.+. +...|...-. -| ..+.+.+
T Consensus 135 ~~~l~~~~~~LkpgG~li~~~~~~~~--------------l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~f~l~ 200 (313)
T 3bgv_A 135 DMMLRNACERLSPGGYFIGTTPNSFE--------------LIRRLEASETESFGNEIYTVKFQKKGDYPLFGCKYDFNLE 200 (313)
T ss_dssp HHHHHHHHTTEEEEEEEEEEEECHHH--------------HHHHHTTSSSSEEECSSEEEEESCSSCCCSSCCEEEEEEC
T ss_pred HHHHHHHHHHhCCCcEEEEecCChHH--------------HHHHHHhhccCccCCeeEEEEeCCCCCCCCccceEEEEEC
Confidence 56778889999999999999876531 1222221100 00 0000000
Q ss_pred cccCccccCCCHHHHHHHHhhcCceEEeeEEEE
Q 017747 262 VAYHAHFYAPSKEEIEGEVGREGSFKLDQLDMF 294 (366)
Q Consensus 262 d~f~~P~y~ps~eEv~~~i~~~gsf~i~~~e~~ 294 (366)
.....|.|..+.+++.+++++.| |++...+.|
T Consensus 201 ~~~~~~~~~~~~~~~~~l~~~~G-~~~v~~~~f 232 (313)
T 3bgv_A 201 GVVDVPEFLVYFPLLNEMAKKYN-MKLVYKKTF 232 (313)
T ss_dssp ---CCEEECCCHHHHHHHGGGGT-EEEEEEEEH
T ss_pred CcccCcceEEcHHHHHHHHHHcC-cEEEEecCH
Confidence 23356778889999999999999 888766554
|
| >2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ... | Back alignment and structure |
|---|
Probab=98.84 E-value=5e-09 Score=98.48 Aligned_cols=90 Identities=20% Similarity=0.178 Sum_probs=65.2
Q ss_pred CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEEE
Q 017747 143 FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLI 222 (366)
Q Consensus 143 fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~lvl~ 222 (366)
+|++++|+++|+.++||+..- ..|+..+|+.-++-|+|||+|++.
T Consensus 170 ~~~~~fD~V~~~~~l~~~~~~-----------------------------------~~~~~~~l~~~~r~LkpGG~l~~~ 214 (289)
T 2g72_A 170 PAPLPADALVSAFCLEAVSPD-----------------------------------LASFQRALDHITTLLRPGGHLLLI 214 (289)
T ss_dssp SSCSSEEEEEEESCHHHHCSS-----------------------------------HHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred cCCCCCCEEEehhhhhhhcCC-----------------------------------HHHHHHHHHHHHHhcCCCCEEEEE
Confidence 567889999999999996531 124566778889999999999997
Q ss_pred eecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEeeEEEEeec
Q 017747 223 LLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLDMFQVE 297 (366)
Q Consensus 223 ~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~~~e~~~~~ 297 (366)
..-..+. + . .| ....+.++.+++++.+.+++.| |++..++.+..+
T Consensus 215 ~~~~~~~--------~--~-----------~~--------~~~~~~~~~~~~~l~~~l~~aG-f~~~~~~~~~~~ 259 (289)
T 2g72_A 215 GALEESW--------Y--L-----------AG--------EARLTVVPVSEEEVREALVRSG-YKVRDLRTYIMP 259 (289)
T ss_dssp EEESCCE--------E--E-----------ET--------TEEEECCCCCHHHHHHHHHHTT-EEEEEEEEEECC
T ss_pred EecCcce--------E--E-----------cC--------CeeeeeccCCHHHHHHHHHHcC-CeEEEeeEeecc
Confidence 4222110 0 0 01 1134567889999999999999 999888877643
|
| >3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=98.84 E-value=9.9e-09 Score=91.52 Aligned_cols=141 Identities=16% Similarity=0.170 Sum_probs=93.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+ .+. ..+++..|+.......+-+.. + .-
T Consensus 43 ~~~~vLDiGcG~G~~~~~l--------~~~----------~~~v~~vD~s~~~~~~a~~~~-----------~-----~~ 88 (211)
T 3e23_A 43 AGAKILELGCGAGYQAEAM--------LAA----------GFDVDATDGSPELAAEASRRL-----------G-----RP 88 (211)
T ss_dssp TTCEEEESSCTTSHHHHHH--------HHT----------TCEEEEEESCHHHHHHHHHHH-----------T-----SC
T ss_pred CCCcEEEECCCCCHHHHHH--------HHc----------CCeEEEECCCHHHHHHHHHhc-----------C-----Cc
Confidence 4579999999999988642 221 267888898643222111110 0 11
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
+. .+++. .+-+++++|+++++.++|++.. .|+..+|+.-
T Consensus 89 ~~---~~d~~-~~~~~~~fD~v~~~~~l~~~~~-------------------------------------~~~~~~l~~~ 127 (211)
T 3e23_A 89 VR---TMLFH-QLDAIDAYDAVWAHACLLHVPR-------------------------------------DELADVLKLI 127 (211)
T ss_dssp CE---ECCGG-GCCCCSCEEEEEECSCGGGSCH-------------------------------------HHHHHHHHHH
T ss_pred eE---Eeeec-cCCCCCcEEEEEecCchhhcCH-------------------------------------HHHHHHHHHH
Confidence 12 23553 3348899999999999999641 2455677888
Q ss_pred HHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEe
Q 017747 210 SEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLD 289 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~ 289 (366)
.+-|+|||++++++....... .+.+...+.+.+.+++.+.+++.|.|++.
T Consensus 128 ~~~LkpgG~l~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~~~~l~~aG~f~~~ 177 (211)
T 3e23_A 128 WRALKPGGLFYASYKSGEGEG------------------------------RDKLARYYNYPSEEWLRARYAEAGTWASV 177 (211)
T ss_dssp HHHEEEEEEEEEEEECCSSCE------------------------------ECTTSCEECCCCHHHHHHHHHHHCCCSEE
T ss_pred HHhcCCCcEEEEEEcCCCccc------------------------------ccccchhccCCCHHHHHHHHHhCCCcEEE
Confidence 899999999999975443210 01223345678999999999999868887
Q ss_pred eEEEEe
Q 017747 290 QLDMFQ 295 (366)
Q Consensus 290 ~~e~~~ 295 (366)
.++...
T Consensus 178 ~~~~~~ 183 (211)
T 3e23_A 178 AVESSE 183 (211)
T ss_dssp EEEEEE
T ss_pred EEEecc
Confidence 776543
|
| >1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A* | Back alignment and structure |
|---|
Probab=98.83 E-value=2.7e-08 Score=92.87 Aligned_cols=166 Identities=19% Similarity=0.211 Sum_probs=98.3
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+...+|+|+|||+|..+.. +.+. +..+++..|+.......+-+.+. . .+. ..+
T Consensus 63 ~~~~~vLDiGcG~G~~~~~--------l~~~---------~~~~v~gvD~s~~~~~~a~~~~~-------~-~~~--~~~ 115 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLK--------YERA---------GIGEYYGVDIAEVSINDARVRAR-------N-MKR--RFK 115 (298)
T ss_dssp CTTCEEEEETCTTTTTHHH--------HHHH---------TCSEEEEEESCHHHHHHHHHHHH-------T-SCC--SSE
T ss_pred CCCCeEEEECCCCCHHHHH--------HHHC---------CCCEEEEEECCHHHHHHHHHHHH-------h-cCC--Ccc
Confidence 4568999999999998864 2221 12588999986543332222111 0 111 012
Q ss_pred -eEEeccCCCcccccC-CCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 129 -VYIAGYPGSFYGRLF-PNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 129 -~f~~~vpgSFy~~lf-p~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
.|+. +++.+-.+ +++++|+++++.++||+-. . ..|...+|
T Consensus 116 v~~~~---~d~~~~~~~~~~~fD~v~~~~~l~~~~~------~-----------------------------~~~~~~~l 157 (298)
T 1ri5_A 116 VFFRA---QDSYGRHMDLGKEFDVISSQFSFHYAFS------T-----------------------------SESLDIAQ 157 (298)
T ss_dssp EEEEE---SCTTTSCCCCSSCEEEEEEESCGGGGGS------S-----------------------------HHHHHHHH
T ss_pred EEEEE---CCccccccCCCCCcCEEEECchhhhhcC------C-----------------------------HHHHHHHH
Confidence 2333 45554445 6889999999999999521 0 13556778
Q ss_pred HHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHH-HHcCc----------cch---hhh-----cc-cCc
Q 017747 207 RSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAIL-VSQGE----------IEK---EKL-----VA-YHA 266 (366)
Q Consensus 207 ~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~m-v~eG~----------i~~---e~~-----d~-f~~ 266 (366)
+.-.+-|+|||++++..+.... +.+.+ ... ....+ +.. .+. +. -..
T Consensus 158 ~~~~~~LkpgG~l~~~~~~~~~----------~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~ 223 (298)
T 1ri5_A 158 RNIARHLRPGGYFIMTVPSRDV----------ILERY----KQGRMSNDFYKIELEKMEDVPMESVREYRFTLLDSVNNC 223 (298)
T ss_dssp HHHHHTEEEEEEEEEEEECHHH----------HHHHH----HHTCCBCSSEEEECCCCSSCCTTTCCEEEEEETTSCSSE
T ss_pred HHHHHhcCCCCEEEEEECCHHH----------HHHHH----ccCccCCeeEEEEeCccccccccccceEEEEEchhhcCC
Confidence 8889999999999999865421 11111 110 00000 000 000 00 023
Q ss_pred cccCCCHHHHHHHHhhcCceEEeeEEEE
Q 017747 267 HFYAPSKEEIEGEVGREGSFKLDQLDMF 294 (366)
Q Consensus 267 P~y~ps~eEv~~~i~~~gsf~i~~~e~~ 294 (366)
|.++.+++|+..++++.| |++...+.+
T Consensus 224 ~~~~~~~~~l~~ll~~aG-f~~v~~~~~ 250 (298)
T 1ri5_A 224 IEYFVDFTRMVDGFKRLG-LSLVERKGF 250 (298)
T ss_dssp EEECCCHHHHHHHHHTTT-EEEEEEEEH
T ss_pred cccccCHHHHHHHHHHcC-CEEEEecCH
Confidence 457889999999999999 988766554
|
| >3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.82 E-value=1.6e-08 Score=95.42 Aligned_cols=208 Identities=14% Similarity=0.116 Sum_probs=114.1
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+ .+.+ .+..+|+..|+........-+.+. ...+.. .+-.
T Consensus 36 ~~~~vLDiGcG~G~~~~~l--------a~~~-------~~~~~v~gvD~s~~~~~~a~~~~~-------~~~~~~-~~v~ 92 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQM--------AQEL-------KPFEQIIGSDLSATMIKTAEVIKE-------GSPDTY-KNVS 92 (299)
T ss_dssp CCSEEEEETCTTTHHHHHH--------HHHS-------SCCSEEEEEESCHHHHHHHHHHHH-------HCC-CC-TTEE
T ss_pred CCCEEEEECCCCCHHHHHH--------HHhC-------CCCCEEEEEeCCHHHHHHHHHHHH-------hccCCC-CceE
Confidence 5689999999999998753 2221 134889999986543332222111 100110 1223
Q ss_pred EEeccCCCcccccCCC------CcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPN------NSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFT 203 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~------~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~ 203 (366)
|+. +++.+-.++. +++|+++++.++||+ + | .
T Consensus 93 ~~~---~d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~-~-~--------------------------------------~ 129 (299)
T 3g5t_A 93 FKI---SSSDDFKFLGADSVDKQKIDMITAVECAHWF-D-F--------------------------------------E 129 (299)
T ss_dssp EEE---CCTTCCGGGCTTTTTSSCEEEEEEESCGGGS-C-H--------------------------------------H
T ss_pred EEE---cCHHhCCccccccccCCCeeEEeHhhHHHHh-C-H--------------------------------------H
Confidence 444 3554434565 899999999999998 3 2 1
Q ss_pred HHHHHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccC-CCHHHHHHHHhh
Q 017747 204 LFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYA-PSKEEIEGEVGR 282 (366)
Q Consensus 204 ~FL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~-ps~eEv~~~i~~ 282 (366)
.+|+.-.+-|+|||+|++...+....... . .+...+.++... +....|++. |..+.+++.+++
T Consensus 130 ~~l~~~~~~LkpgG~l~i~~~~~~~~~~~----~----~~~~~~~~~~~~--------~~~~~~~w~~p~~~~~~~~l~~ 193 (299)
T 3g5t_A 130 KFQRSAYANLRKDGTIAIWGYADPIFPDY----P----EFDDLMIEVPYG--------KQGLGPYWEQPGRSRLRNMLKD 193 (299)
T ss_dssp HHHHHHHHHEEEEEEEEEEEEEEEECTTC----G----GGTTHHHHHHHC--------TTTTGGGSCTTHHHHHHTTTTT
T ss_pred HHHHHHHHhcCCCcEEEEEecCCccccCc----H----HHHHHHHHhccC--------cccccchhhchhhHHHHHhhhc
Confidence 34566688999999999976654321100 0 122233332211 113345444 888899999999
Q ss_pred cCce-----EEeeEEEEee-ccCCC--------C----cccchhhhHhhhHHHhhhhH-HHh--hcCCCcchHHHHHHH
Q 017747 283 EGSF-----KLDQLDMFQV-ERQGH--------D----RGESYGSAVARTVRAIQEST-IIH--HFGIGEGVLDNLFEI 340 (366)
Q Consensus 283 ~gsf-----~i~~~e~~~~-~~~~~--------~----d~~~~~~~~~~~~Ra~~e~~-l~~--~~g~~~~i~d~lf~r 340 (366)
.| | +-.+.+.+.. .|... . .....-+.+..++|+|+.-. ... .-+...++++++.++
T Consensus 194 ~g-fp~~~f~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t~s~~~~~~~~~~~~~~~~~~~~~~~~ 271 (299)
T 3g5t_A 194 SH-LDPELFHDIQVSYFCAEDVRDKVKLHQHTKKPLLIRKQVTLVEFADYVRTWSAYHQWKQDPKNKDKEDVADWFIKE 271 (299)
T ss_dssp CC-CCTTTEEEEEEEEECGGGGGCHHHHHHCSSCCCCCEEEECHHHHHHHHTTSHHHHHHHHCGGGTTSCCHHHHHHHH
T ss_pred cC-CChHHcCcceEEEecccccccccccccCCCCceeeeccccHHHHHHHHHHhHHHHHHHhcccCCchhhHHHHHHHH
Confidence 88 5 3322233322 11111 0 00223457888888876521 112 223112666666655
|
| >3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A* | Back alignment and structure |
|---|
Probab=98.81 E-value=8.9e-09 Score=98.03 Aligned_cols=153 Identities=12% Similarity=0.017 Sum_probs=95.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+. +++ ..+|+..|+........-+.+ ...+.. ..-.
T Consensus 117 ~~~~vLDiGcG~G~~~~~la--------~~~---------~~~v~gvD~s~~~~~~a~~~~--------~~~~~~-~~v~ 170 (312)
T 3vc1_A 117 PDDTLVDAGCGRGGSMVMAH--------RRF---------GSRVEGVTLSAAQADFGNRRA--------RELRID-DHVR 170 (312)
T ss_dssp TTCEEEEESCTTSHHHHHHH--------HHH---------CCEEEEEESCHHHHHHHHHHH--------HHTTCT-TTEE
T ss_pred CCCEEEEecCCCCHHHHHHH--------HHc---------CCEEEEEeCCHHHHHHHHHHH--------HHcCCC-CceE
Confidence 45799999999999987532 221 167888898643222111111 111111 1123
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
|+. +++.+-.+|++++|+++++.++||+. +. .+|+.-
T Consensus 171 ~~~---~d~~~~~~~~~~fD~V~~~~~l~~~~--~~--------------------------------------~~l~~~ 207 (312)
T 3vc1_A 171 SRV---CNMLDTPFDKGAVTASWNNESTMYVD--LH--------------------------------------DLFSEH 207 (312)
T ss_dssp EEE---CCTTSCCCCTTCEEEEEEESCGGGSC--HH--------------------------------------HHHHHH
T ss_pred EEE---CChhcCCCCCCCEeEEEECCchhhCC--HH--------------------------------------HHHHHH
Confidence 444 46655457889999999999999973 21 235666
Q ss_pred HHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEe
Q 017747 210 SEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLD 289 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~ 289 (366)
.+-|+|||++++......+... .....++.+ ... ..| .+++.+++.+++++.| |++.
T Consensus 208 ~~~LkpgG~l~~~~~~~~~~~~---~~~~~~~~~----~~~--------------~~~-~~~s~~~~~~~l~~aG-f~~~ 264 (312)
T 3vc1_A 208 SRFLKVGGRYVTITGCWNPRYG---QPSKWVSQI----NAH--------------FEC-NIHSRREYLRAMADNR-LVPH 264 (312)
T ss_dssp HHHEEEEEEEEEEEEEECTTTC---SCCHHHHHH----HHH--------------HTC-CCCBHHHHHHHHHTTT-EEEE
T ss_pred HHHcCCCcEEEEEEcccccccc---chhHHHHHH----Hhh--------------hcC-CCCCHHHHHHHHHHCC-CEEE
Confidence 8899999999999876655321 111111111 110 111 4789999999999999 9887
Q ss_pred eEEEE
Q 017747 290 QLDMF 294 (366)
Q Consensus 290 ~~e~~ 294 (366)
..+.+
T Consensus 265 ~~~~~ 269 (312)
T 3vc1_A 265 TIVDL 269 (312)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 66654
|
| >2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15 | Back alignment and structure |
|---|
Probab=98.81 E-value=1.5e-08 Score=94.30 Aligned_cols=86 Identities=19% Similarity=0.173 Sum_probs=62.9
Q ss_pred CCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEEEee
Q 017747 145 NNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILL 224 (366)
Q Consensus 145 ~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~lvl~~~ 224 (366)
.+++|+++|+++|||+..-+ .|+...|+.-++-|||||+|+++..
T Consensus 154 ~~~fD~V~~~~~l~~i~~~~-----------------------------------~~~~~~l~~i~r~LKPGG~li~~~~ 198 (263)
T 2a14_A 154 LPLADCVLTLLAMECACCSL-----------------------------------DAYRAALCNLASLLKPGGHLVTTVT 198 (263)
T ss_dssp CCCEEEEEEESCHHHHCSSH-----------------------------------HHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred cCCCCEeeehHHHHHhcCCH-----------------------------------HHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 57999999999999964321 2455667888999999999999965
Q ss_pred cCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEeeEEEEe
Q 017747 225 GRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLDMFQ 295 (366)
Q Consensus 225 g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~~~e~~~ 295 (366)
...+. +. .| .-..+.+..+.+|+.+.+++.| |++.+++...
T Consensus 199 ~~~~~--------~~-------------~g--------~~~~~~~~~~~~~l~~~l~~aG-F~i~~~~~~~ 239 (263)
T 2a14_A 199 LRLPS--------YM-------------VG--------KREFSCVALEKGEVEQAVLDAG-FDIEQLLHSP 239 (263)
T ss_dssp SSCCE--------EE-------------ET--------TEEEECCCCCHHHHHHHHHHTT-EEEEEEEEEC
T ss_pred ecCcc--------ce-------------eC--------CeEeeccccCHHHHHHHHHHCC-CEEEEEeecc
Confidence 43221 10 11 0123455679999999999999 9998887764
|
| >1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43 | Back alignment and structure |
|---|
Probab=98.79 E-value=1.2e-08 Score=92.22 Aligned_cols=109 Identities=14% Similarity=0.177 Sum_probs=71.1
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+...+|+|+|||+|..+..+ .+. ..+++..|+..+.....-+.+. . .+ ..-
T Consensus 36 ~~~~~vLdiG~G~G~~~~~l--------~~~----------~~~~~~~D~s~~~~~~a~~~~~-------~-~~---~~~ 86 (246)
T 1y8c_A 36 LVFDDYLDLACGTGNLTENL--------CPK----------FKNTWAVDLSQEMLSEAENKFR-------S-QG---LKP 86 (246)
T ss_dssp CCTTEEEEETCTTSTTHHHH--------GGG----------SSEEEEECSCHHHHHHHHHHHH-------H-TT---CCC
T ss_pred CCCCeEEEeCCCCCHHHHHH--------HHC----------CCcEEEEECCHHHHHHHHHHHh-------h-cC---CCe
Confidence 35689999999999998742 111 1578899986543333222111 1 00 111
Q ss_pred eEEeccCCCcccccCCCCcccEEEccc-ccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSN-SLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~-alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
-|.. +++.+-.++ +++|+++++. ++||+.. ..|...+|+
T Consensus 87 ~~~~---~d~~~~~~~-~~fD~v~~~~~~l~~~~~------------------------------------~~~~~~~l~ 126 (246)
T 1y8c_A 87 RLAC---QDISNLNIN-RKFDLITCCLDSTNYIID------------------------------------SDDLKKYFK 126 (246)
T ss_dssp EEEC---CCGGGCCCS-CCEEEEEECTTGGGGCCS------------------------------------HHHHHHHHH
T ss_pred EEEe---cccccCCcc-CCceEEEEcCccccccCC------------------------------------HHHHHHHHH
Confidence 2333 455443455 8999999998 9999632 124566788
Q ss_pred HHHHHhccCceEEEEeecC
Q 017747 208 SRSEELVVGGRMVLILLGR 226 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~g~ 226 (366)
.-.+-|+|||++++.+...
T Consensus 127 ~~~~~L~pgG~l~~~~~~~ 145 (246)
T 1y8c_A 127 AVSNHLKEGGVFIFDINSY 145 (246)
T ss_dssp HHHTTEEEEEEEEEEEECH
T ss_pred HHHHhcCCCcEEEEEecCH
Confidence 8899999999999987654
|
| >3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str} | Back alignment and structure |
|---|
Probab=98.79 E-value=2.9e-08 Score=91.00 Aligned_cols=164 Identities=11% Similarity=0.126 Sum_probs=95.4
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+.. +.+. .+ -+++..|+........-+... . ..-.
T Consensus 44 ~~~~vLD~GcG~G~~~~~--------l~~~--------~~-~~v~~vD~s~~~~~~a~~~~~-----------~--~~~~ 93 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIY--------AAEH--------GA-KKVLGIDLSERMLTEAKRKTT-----------S--PVVC 93 (253)
T ss_dssp TTCEEEEETCTTCHHHHH--------HHHT--------TC-SEEEEEESCHHHHHHHHHHCC-----------C--TTEE
T ss_pred CCCEEEEECCCCCHHHHH--------HHHc--------CC-CEEEEEECCHHHHHHHHHhhc-----------c--CCeE
Confidence 468999999999998764 2221 12 288999986532222211111 0 1122
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
|.. +++..-.+|++++|+++++.++||+.+ ...+|+.-
T Consensus 94 ~~~---~d~~~~~~~~~~fD~v~~~~~l~~~~~---------------------------------------~~~~l~~~ 131 (253)
T 3g5l_A 94 YEQ---KAIEDIAIEPDAYNVVLSSLALHYIAS---------------------------------------FDDICKKV 131 (253)
T ss_dssp EEE---CCGGGCCCCTTCEEEEEEESCGGGCSC---------------------------------------HHHHHHHH
T ss_pred EEE---cchhhCCCCCCCeEEEEEchhhhhhhh---------------------------------------HHHHHHHH
Confidence 343 466554578899999999999999733 12346677
Q ss_pred HHHhccCceEEEEeecCCCCCCC---------CCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHH
Q 017747 210 SEELVVGGRMVLILLGRIGPDHV---------DRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEV 280 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~~~~~~---------~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i 280 (366)
.+-|+|||+++++.......... ....... |.....++.... ....-....|.+|.+|+.+.+
T Consensus 132 ~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~~~~t~~~~~~~l 203 (253)
T 3g5l_A 132 YINLKSSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWP-------VDRYFNESMRTS-HFLGEDVQKYHRTVTTYIQTL 203 (253)
T ss_dssp HHHEEEEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEE-------ECCTTCCCEEEE-EETTEEEEEECCCHHHHHHHH
T ss_pred HHHcCCCcEEEEEeCCCccccCccccceeccCCceEEEE-------eccccccceEEE-eeccccCccEecCHHHHHHHH
Confidence 89999999999987543211000 0000000 000000111000 001113556778999999999
Q ss_pred hhcCceEEeeEEEE
Q 017747 281 GREGSFKLDQLDMF 294 (366)
Q Consensus 281 ~~~gsf~i~~~e~~ 294 (366)
+++| |++..++..
T Consensus 204 ~~aG-F~~~~~~e~ 216 (253)
T 3g5l_A 204 LKNG-FQINSVIEP 216 (253)
T ss_dssp HHTT-EEEEEEECC
T ss_pred HHcC-CeeeeeecC
Confidence 9999 998766543
|
| >3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A* | Back alignment and structure |
|---|
Probab=98.79 E-value=3.5e-09 Score=100.06 Aligned_cols=177 Identities=16% Similarity=0.153 Sum_probs=99.1
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc-
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS- 128 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~- 128 (366)
.+.+|+|+|||+|..+..+ .+. ..+|+..|+.......+-+.+......+. .+
T Consensus 82 ~~~~vLDlGcG~G~~~~~l--------~~~----------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~--------~~v 135 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPF--------LDL----------GWEVTALELSTSVLAAFRKRLAEAPADVR--------DRC 135 (299)
T ss_dssp CCSCEEEETCTTTTTHHHH--------HTT----------TCCEEEEESCHHHHHHHHHHHHTSCHHHH--------TTE
T ss_pred CCCcEEEEeccCCHHHHHH--------HHc----------CCeEEEEECCHHHHHHHHHHHhhcccccc--------cce
Confidence 3459999999999998752 121 26789999865433332222111000000 12
Q ss_pred eEEeccCCCcccccCCCCcccEEE-cccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIH-SSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~-S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
-|+. +++.+ +-+++++|+++ ++.++||++. .|...+|+
T Consensus 136 ~~~~---~d~~~-~~~~~~fD~v~~~~~~~~~~~~-------------------------------------~~~~~~l~ 174 (299)
T 3g2m_A 136 TLVQ---GDMSA-FALDKRFGTVVISSGSINELDE-------------------------------------ADRRGLYA 174 (299)
T ss_dssp EEEE---CBTTB-CCCSCCEEEEEECHHHHTTSCH-------------------------------------HHHHHHHH
T ss_pred EEEe---Cchhc-CCcCCCcCEEEECCcccccCCH-------------------------------------HHHHHHHH
Confidence 2344 45544 33378999877 5688998532 24556778
Q ss_pred HHHHHhccCceEEEEeecCCCCCCCCCCchhHHHH-HHHHHHHHHHcCccc---------------hhhhcccCccccCC
Q 017747 208 SRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWEL-LSRSLAILVSQGEIE---------------KEKLVAYHAHFYAP 271 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~-l~~al~~mv~eG~i~---------------~e~~d~f~~P~y~p 271 (366)
.-.+-|+|||+|++..................+.. -...+ ........ ...+..+....++.
T Consensus 175 ~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (299)
T 3g2m_A 175 SVREHLEPGGKFLLSLAMSEAAESEPLERKQELPGRSGRRY--VLHVRHLPAEEIQEITIHPADETTDPFVVCTHRRRLL 252 (299)
T ss_dssp HHHHHEEEEEEEEEEEECCHHHHSCCCCC---------------CCEEEEEEEEEEEEEEEESCC--CCCCEEEEEEEEE
T ss_pred HHHHHcCCCcEEEEEeecCccccccchhccceeecCCCcEE--EEEEEEeccccEEEEEEEeccCCCCcEEEEEEEEEEe
Confidence 88999999999999998775431110000000000 00000 00000000 00112234556678
Q ss_pred CHHHHHHHHhhcCceEEeeEEEEee
Q 017747 272 SKEEIEGEVGREGSFKLDQLDMFQV 296 (366)
Q Consensus 272 s~eEv~~~i~~~gsf~i~~~e~~~~ 296 (366)
+++|+.+.+++.| |++...+.+..
T Consensus 253 t~~el~~ll~~aG-F~v~~~~~~~~ 276 (299)
T 3g2m_A 253 APDQVVRELVRSG-FDVIAQTPFAS 276 (299)
T ss_dssp CHHHHHHHHHHTT-CEEEEEEEECT
T ss_pred CHHHHHHHHHHCC-CEEEEEEecCC
Confidence 9999999999999 99988877653
|
| >3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A* | Back alignment and structure |
|---|
Probab=98.79 E-value=4.5e-08 Score=92.63 Aligned_cols=165 Identities=16% Similarity=0.156 Sum_probs=97.7
Q ss_pred CceEEEeecCCC--CcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCC
Q 017747 50 KTINIADLGCSS--GPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSP 127 (366)
Q Consensus 50 ~~~~IaDlGCs~--G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~ 127 (366)
..-+|+|+|||+ |.|+..+...+ .|..+|+..|....+....-+.+.. .+. ..
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~---------------~P~arVv~VD~sp~mLa~Ar~~l~~--------~~~--~~ 132 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSV---------------APESRVVYVDNDPIVLTLSQGLLAS--------TPE--GR 132 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHH---------------CTTCEEEEEECCHHHHHTTHHHHCC--------CSS--SE
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHH---------------CCCCEEEEEeCChHHHHHHHHHhcc--------CCC--Cc
Confidence 356899999997 77876432222 3568999999865433322222211 000 11
Q ss_pred ceEEeccCCCcccc--cC--C--CCccc-----EEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHH
Q 017747 128 SVYIAGYPGSFYGR--LF--P--NNSLH-----FIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFK 196 (366)
Q Consensus 128 ~~f~~~vpgSFy~~--lf--p--~~s~~-----~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~ 196 (366)
.-|+.+ ++.+- ++ | .+++| .++++.+||||.+-.
T Consensus 133 ~~~v~a---D~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~-------------------------------- 177 (277)
T 3giw_A 133 TAYVEA---DMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDED-------------------------------- 177 (277)
T ss_dssp EEEEEC---CTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGG--------------------------------
T ss_pred EEEEEe---cccChhhhhcccccccccCcCCcchHHhhhhHhcCCchh--------------------------------
Confidence 236665 44321 11 1 34555 488999999986521
Q ss_pred HHHHHHHHHHHHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHH
Q 017747 197 QFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEI 276 (366)
Q Consensus 197 Q~~~D~~~FL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv 276 (366)
|....|+.-.+-|+|||+|+++.++.+.. + ...+.+.+.++. - -.|+.++|.+|+
T Consensus 178 ----~p~~~l~~l~~~L~PGG~Lvls~~~~d~~-p------~~~~~~~~~~~~---~-----------g~p~~~rs~~ei 232 (277)
T 3giw_A 178 ----DAVGIVRRLLEPLPSGSYLAMSIGTAEFA-P------QEVGRVAREYAA---R-----------NMPMRLRTHAEA 232 (277)
T ss_dssp ----CHHHHHHHHHTTSCTTCEEEEEEECCTTS-H------HHHHHHHHHHHH---T-----------TCCCCCCCHHHH
T ss_pred ----hHHHHHHHHHHhCCCCcEEEEEeccCCCC-H------HHHHHHHHHHHh---c-----------CCCCccCCHHHH
Confidence 11123455578899999999999887531 1 112223333332 2 348899999999
Q ss_pred HHHHhhcCceEEeeEEEEe-eccCCCC
Q 017747 277 EGEVGREGSFKLDQLDMFQ-VERQGHD 302 (366)
Q Consensus 277 ~~~i~~~gsf~i~~~e~~~-~~~~~~~ 302 (366)
.+.+. | |++..--... ..|.|..
T Consensus 233 ~~~f~--G-lelvePG~v~~~~Wrp~~ 256 (277)
T 3giw_A 233 EEFFE--G-LELVEPGIVQVHKWHPDA 256 (277)
T ss_dssp HHTTT--T-SEECTTCSEEGGGSSCCT
T ss_pred HHHhC--C-CcccCCcEeecccccCCC
Confidence 99995 7 8875544433 4487753
|
| >3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A* | Back alignment and structure |
|---|
Probab=98.77 E-value=1.5e-07 Score=90.30 Aligned_cols=151 Identities=18% Similarity=0.091 Sum_probs=92.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+.. +.++ .|..+++.-|+|. .....-+.+ ...+. .+++
T Consensus 169 ~~~~vlDvG~G~G~~~~~--------l~~~--------~p~~~~~~~D~~~-~~~~a~~~~--------~~~~~--~~~v 221 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSA--------LLTA--------HEDLSGTVLDLQG-PASAAHRRF--------LDTGL--SGRA 221 (332)
T ss_dssp GGSEEEEETCTTSHHHHH--------HHHH--------CTTCEEEEEECHH-HHHHHHHHH--------HHTTC--TTTE
T ss_pred CCCEEEEeCCChhHHHHH--------HHHH--------CCCCeEEEecCHH-HHHHHHHhh--------hhcCc--CcCe
Confidence 468999999999988764 3332 2447788889842 222211111 11111 1223
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
..+.++|+ .-+|. ++|++++.+++|..++ .+...+|+.-
T Consensus 222 --~~~~~d~~-~~~p~-~~D~v~~~~vlh~~~~-------------------------------------~~~~~~l~~~ 260 (332)
T 3i53_A 222 --QVVVGSFF-DPLPA-GAGGYVLSAVLHDWDD-------------------------------------LSAVAILRRC 260 (332)
T ss_dssp --EEEECCTT-SCCCC-SCSEEEEESCGGGSCH-------------------------------------HHHHHHHHHH
T ss_pred --EEecCCCC-CCCCC-CCcEEEEehhhccCCH-------------------------------------HHHHHHHHHH
Confidence 22346887 44566 8999999999997433 1344567888
Q ss_pred HHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEe
Q 017747 210 SEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLD 289 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~ 289 (366)
++-|+|||++++.-.-.++..+ ...++... |+.. .-..+|.+|++++++++| |++.
T Consensus 261 ~~~L~pgG~l~i~e~~~~~~~~-----~~~~d~~~-----~~~~-------------~~~~~t~~e~~~ll~~aG-f~~~ 316 (332)
T 3i53_A 261 AEAAGSGGVVLVIEAVAGDEHA-----GTGMDLRM-----LTYF-------------GGKERSLAELGELAAQAG-LAVR 316 (332)
T ss_dssp HHHHTTTCEEEEEECCCC---C-----CHHHHHHH-----HHHH-------------SCCCCCHHHHHHHHHHTT-EEEE
T ss_pred HHhcCCCCEEEEEeecCCCCCc-----cHHHHHHH-----HhhC-------------CCCCCCHHHHHHHHHHCC-CEEE
Confidence 9999999999998654433211 12223211 1111 123579999999999999 9886
Q ss_pred eEE
Q 017747 290 QLD 292 (366)
Q Consensus 290 ~~e 292 (366)
+..
T Consensus 317 ~~~ 319 (332)
T 3i53_A 317 AAH 319 (332)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
|
| >3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A* | Back alignment and structure |
|---|
Probab=98.77 E-value=1.5e-08 Score=93.48 Aligned_cols=105 Identities=14% Similarity=0.137 Sum_probs=69.5
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+...+|+|+|||+|..+..+ .+ . ..+++..|+.......+-+.++ +-
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l--------~~--------~--~~~v~gvD~s~~~~~~a~~~~~---------------~~ 95 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHL--------AD--------S--FGTVEGLELSADMLAIARRRNP---------------DA 95 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHH--------TT--------T--SSEEEEEESCHHHHHHHHHHCT---------------TS
T ss_pred CCCCcEEEeCCcCCHHHHHH--------HH--------c--CCeEEEEECCHHHHHHHHhhCC---------------CC
Confidence 45689999999999988642 11 1 1578888986432222222111 12
Q ss_pred eEEeccCCCcccccCCCCcccEEEccc-ccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSN-SLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~-alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
-|+. +++.+ +-+++++|+++++. ++||+.. ..|+..+|+
T Consensus 96 ~~~~---~d~~~-~~~~~~fD~v~~~~~~l~~~~~------------------------------------~~~~~~~l~ 135 (263)
T 3pfg_A 96 VLHH---GDMRD-FSLGRRFSAVTCMFSSIGHLAG------------------------------------QAELDAALE 135 (263)
T ss_dssp EEEE---CCTTT-CCCSCCEEEEEECTTGGGGSCH------------------------------------HHHHHHHHH
T ss_pred EEEE---CChHH-CCccCCcCEEEEcCchhhhcCC------------------------------------HHHHHHHHH
Confidence 2333 35543 32378999999998 9999643 135667788
Q ss_pred HHHHHhccCceEEEEeecC
Q 017747 208 SRSEELVVGGRMVLILLGR 226 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~g~ 226 (366)
.-.+-|+|||++++.....
T Consensus 136 ~~~~~L~pgG~l~i~~~~~ 154 (263)
T 3pfg_A 136 RFAAHVLPDGVVVVEPWWF 154 (263)
T ss_dssp HHHHTEEEEEEEEECCCCC
T ss_pred HHHHhcCCCcEEEEEeccC
Confidence 8899999999999975433
|
| >3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A* | Back alignment and structure |
|---|
Probab=98.77 E-value=2.2e-07 Score=90.89 Aligned_cols=153 Identities=16% Similarity=0.135 Sum_probs=93.1
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
....+|+|+|||+|..+.. +.++ .|..+++..|+|. ....... .++
T Consensus 202 ~~~~~vlDvG~G~G~~~~~--------l~~~--------~p~~~~~~~D~~~-----~~~~a~~-------------~~~ 247 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASM--------IVAK--------YPSINAINFDLPH-----VIQDAPA-------------FSG 247 (368)
T ss_dssp TTCSEEEEETCTTSHHHHH--------HHHH--------CTTCEEEEEECHH-----HHTTCCC-------------CTT
T ss_pred cCCCEEEEeCCCcCHHHHH--------HHHh--------CCCCEEEEEehHH-----HHHhhhh-------------cCC
Confidence 3468999999999998874 3332 3458899999852 1111110 122
Q ss_pred eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
+ ..+.|+|++ -+|++ |++++++.+|+++. .+...+|+.
T Consensus 248 v--~~~~~d~~~-~~p~~--D~v~~~~vlh~~~~-------------------------------------~~~~~~l~~ 285 (368)
T 3reo_A 248 V--EHLGGDMFD-GVPKG--DAIFIKWICHDWSD-------------------------------------EHCLKLLKN 285 (368)
T ss_dssp E--EEEECCTTT-CCCCC--SEEEEESCGGGBCH-------------------------------------HHHHHHHHH
T ss_pred C--EEEecCCCC-CCCCC--CEEEEechhhcCCH-------------------------------------HHHHHHHHH
Confidence 2 234578886 67765 99999999986432 234467788
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEE
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKL 288 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i 288 (366)
-.+-|+|||++++.-.-.++... . . .........-+.-|+. ...-..++.+|++++++++| |++
T Consensus 286 ~~~~L~pgG~l~i~e~~~~~~~~-~-~-~~~~~~~~~d~~~~~~------------~~~g~~rt~~e~~~ll~~AG-F~~ 349 (368)
T 3reo_A 286 CYAALPDHGKVIVAEYILPPSPD-P-S-IATKVVIHTDALMLAY------------NPGGKERTEKEFQALAMASG-FRG 349 (368)
T ss_dssp HHHHSCTTCEEEEEECCCCSSCC-C-C-HHHHHHHHHHHHHHHH------------SSBCCCCCHHHHHHHHHHTT-CCE
T ss_pred HHHHcCCCCEEEEEEeccCCCCC-C-c-hhhhHHHhhhHHHHhh------------cCCCccCCHHHHHHHHHHCC-Cee
Confidence 89999999999987554433211 0 0 0000001111111110 01123578999999999999 888
Q ss_pred eeEEE
Q 017747 289 DQLDM 293 (366)
Q Consensus 289 ~~~e~ 293 (366)
.++..
T Consensus 350 v~~~~ 354 (368)
T 3reo_A 350 FKVAS 354 (368)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 66554
|
| >3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis} | Back alignment and structure |
|---|
Probab=98.76 E-value=8.9e-08 Score=90.75 Aligned_cols=167 Identities=11% Similarity=0.089 Sum_probs=99.3
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+...+|+|+|||+|..++.+ .. ...|..+|+..|+.......+-+.+. ..+. ..+
T Consensus 117 ~~~~~vLDiGcG~G~~~~~l--------a~-------~~~~~~~v~gvD~s~~~~~~a~~~~~--------~~~~--~~~ 171 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLAL--------DY-------SACPGVQLVGIDYDPEALDGATRLAA--------GHAL--AGQ 171 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTS--------CC-------TTCTTCEEEEEESCHHHHHHHHHHHT--------TSTT--GGG
T ss_pred CCCCEEEEecCCCCHHHHHH--------HH-------hcCCCCeEEEEECCHHHHHHHHHHHH--------hcCC--CCc
Confidence 45689999999999988631 00 12455899999986543222222111 0011 111
Q ss_pred e-EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 129 ~-f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
+ |+. +++.+-.++ +++|+++++.++|++... .....||+
T Consensus 172 v~~~~---~d~~~~~~~-~~fD~v~~~~~~~~~~~~------------------------------------~~~~~~l~ 211 (305)
T 3ocj_A 172 ITLHR---QDAWKLDTR-EGYDLLTSNGLNIYEPDD------------------------------------ARVTELYR 211 (305)
T ss_dssp EEEEE---CCGGGCCCC-SCEEEEECCSSGGGCCCH------------------------------------HHHHHHHH
T ss_pred eEEEE---CchhcCCcc-CCeEEEEECChhhhcCCH------------------------------------HHHHHHHH
Confidence 2 333 577665566 999999999999986441 12334677
Q ss_pred HHHHHhccCceEEEEeecCCCCCCCCCC------chhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHh
Q 017747 208 SRSEELVVGGRMVLILLGRIGPDHVDRG------NSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVG 281 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~g~~~~~~~~~~------~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~ 281 (366)
.-.+-|+|||++++....+......... ...........+.+... ..-..+++.+|+.+.++
T Consensus 212 ~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~l~ 279 (305)
T 3ocj_A 212 RFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQ------------PRWNALRTHAQTRAQLE 279 (305)
T ss_dssp HHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTC------------CSCCCCCCHHHHHHHHH
T ss_pred HHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHh------------hhhhccCCHHHHHHHHH
Confidence 7789999999999998877553211110 00001111222221100 11124579999999999
Q ss_pred hcCceEEeeEEE
Q 017747 282 REGSFKLDQLDM 293 (366)
Q Consensus 282 ~~gsf~i~~~e~ 293 (366)
+.| |++.+.+.
T Consensus 280 ~aG-F~~v~~~~ 290 (305)
T 3ocj_A 280 EAG-FTDLRFED 290 (305)
T ss_dssp HTT-CEEEEEEC
T ss_pred HCC-CEEEEEEc
Confidence 999 99876664
|
| >2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42 | Back alignment and structure |
|---|
Probab=98.76 E-value=1.9e-08 Score=91.74 Aligned_cols=147 Identities=14% Similarity=0.065 Sum_probs=94.1
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+ .+ .. ..+++..|+.......+-+.+... +. ..--
T Consensus 79 ~~~~vLDiGcG~G~~~~~l--------~~--------~~-~~~v~~vD~s~~~~~~a~~~~~~~--------~~--~~~~ 131 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRL--------LL--------PL-FREVDMVDITEDFLVQAKTYLGEE--------GK--RVRN 131 (241)
T ss_dssp CCSEEEEETCTTTHHHHHT--------TT--------TT-CSEEEEEESCHHHHHHHHHHTGGG--------GG--GEEE
T ss_pred CCCEEEEECCCCCHHHHHH--------HH--------hc-CCEEEEEeCCHHHHHHHHHHhhhc--------CC--ceEE
Confidence 4689999999999988642 11 11 257889998654433333332210 00 0112
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
|+. +++..-.++++++|++++..++|++.+ .++..+|+.-
T Consensus 132 ~~~---~d~~~~~~~~~~fD~v~~~~~l~~~~~-------------------------------------~~~~~~l~~~ 171 (241)
T 2ex4_A 132 YFC---CGLQDFTPEPDSYDVIWIQWVIGHLTD-------------------------------------QHLAEFLRRC 171 (241)
T ss_dssp EEE---CCGGGCCCCSSCEEEEEEESCGGGSCH-------------------------------------HHHHHHHHHH
T ss_pred EEE---cChhhcCCCCCCEEEEEEcchhhhCCH-------------------------------------HHHHHHHHHH
Confidence 333 455555577789999999999998643 1234567777
Q ss_pred HHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEe
Q 017747 210 SEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLD 289 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~ 289 (366)
.+-|+|||++++........ .+++ . ....+.++.+++.+.+++.| |++.
T Consensus 172 ~~~LkpgG~l~i~~~~~~~~--------~~~~---------------------~-~~~~~~~~~~~~~~~l~~aG-f~~~ 220 (241)
T 2ex4_A 172 KGSLRPNGIIVIKDNMAQEG--------VILD---------------------D-VDSSVCRDLDVVRRIICSAG-LSLL 220 (241)
T ss_dssp HHHEEEEEEEEEEEEEBSSS--------EEEE---------------------T-TTTEEEEBHHHHHHHHHHTT-CCEE
T ss_pred HHhcCCCeEEEEEEccCCCc--------ceec---------------------c-cCCcccCCHHHHHHHHHHcC-CeEE
Confidence 89999999999987655430 0000 0 11234559999999999999 9887
Q ss_pred eEEEE
Q 017747 290 QLDMF 294 (366)
Q Consensus 290 ~~e~~ 294 (366)
+.+..
T Consensus 221 ~~~~~ 225 (241)
T 2ex4_A 221 AEERQ 225 (241)
T ss_dssp EEEEC
T ss_pred Eeeec
Confidence 66643
|
| >3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=98.75 E-value=1.1e-07 Score=91.95 Aligned_cols=153 Identities=20% Similarity=0.154 Sum_probs=93.3
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+...+|+|+|||+|..+.. +.++ .|..+++.-|+|.. .. -+... ..+. .++
T Consensus 183 ~~~~~vLDvG~G~G~~~~~--------l~~~--------~p~~~~~~~D~~~~-~~--~~~~~--------~~~~--~~~ 233 (348)
T 3lst_A 183 PATGTVADVGGGRGGFLLT--------VLRE--------HPGLQGVLLDRAEV-VA--RHRLD--------APDV--AGR 233 (348)
T ss_dssp CSSEEEEEETCTTSHHHHH--------HHHH--------CTTEEEEEEECHHH-HT--TCCCC--------CGGG--TTS
T ss_pred cCCceEEEECCccCHHHHH--------HHHH--------CCCCEEEEecCHHH-hh--ccccc--------ccCC--CCC
Confidence 4568999999999998864 3332 24588899998631 00 00000 0000 112
Q ss_pred eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
+ ..+.++|+ ..+| ++|++++++++|..++ .+...+|+.
T Consensus 234 v--~~~~~d~~-~~~p--~~D~v~~~~vlh~~~d-------------------------------------~~~~~~L~~ 271 (348)
T 3lst_A 234 W--KVVEGDFL-REVP--HADVHVLKRILHNWGD-------------------------------------EDSVRILTN 271 (348)
T ss_dssp E--EEEECCTT-TCCC--CCSEEEEESCGGGSCH-------------------------------------HHHHHHHHH
T ss_pred e--EEEecCCC-CCCC--CCcEEEEehhccCCCH-------------------------------------HHHHHHHHH
Confidence 2 22346887 4456 9999999999997433 133456788
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEE
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKL 288 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i 288 (366)
-.+-|+|||++++.-...++... ......++ +.-|+. ..-..++.+|+++++++.| |++
T Consensus 272 ~~~~LkpgG~l~i~e~~~~~~~~--~~~~~~~d-----~~~~~~-------------~~~~~~t~~e~~~ll~~aG-f~~ 330 (348)
T 3lst_A 272 CRRVMPAHGRVLVIDAVVPEGND--AHQSKEMD-----FMMLAA-------------RTGQERTAAELEPLFTAAG-LRL 330 (348)
T ss_dssp HHHTCCTTCEEEEEECCBCSSSS--CCHHHHHH-----HHHHHT-------------TSCCCCBHHHHHHHHHHTT-EEE
T ss_pred HHHhcCCCCEEEEEEeccCCCCC--cchhhhcC-----hhhhhc-------------CCCcCCCHHHHHHHHHHCC-Cce
Confidence 89999999999997654443211 00011111 111111 1123578999999999999 988
Q ss_pred eeEEE
Q 017747 289 DQLDM 293 (366)
Q Consensus 289 ~~~e~ 293 (366)
.++..
T Consensus 331 ~~~~~ 335 (348)
T 3lst_A 331 DRVVG 335 (348)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 66654
|
| >2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A* | Back alignment and structure |
|---|
Probab=98.74 E-value=1.3e-07 Score=88.07 Aligned_cols=152 Identities=11% Similarity=0.033 Sum_probs=92.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhH--HHHhhhcC-----
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFH--RQLRNERG----- 122 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~--~~~~~~~~----- 122 (366)
...+|+|+|||+|.++.. |.++ | .+|+..|+....-...++...... ..+....+
T Consensus 68 ~~~~vLD~GCG~G~~~~~--------La~~-----G-----~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~ 129 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKW--------FADR-----G-----HTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFK 129 (252)
T ss_dssp CSCEEEETTCTTCTHHHH--------HHHT-----T-----CEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEE
T ss_pred CCCeEEEeCCCCcHHHHH--------HHHC-----C-----CeEEEEECCHHHHHHHHHhcccccccccccccccccccc
Confidence 457999999999999874 3221 1 689999998755444333221000 00000000
Q ss_pred CCCCCc-eEEeccCCCcccccCCC-CcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHH
Q 017747 123 GGSSPS-VYIAGYPGSFYGRLFPN-NSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQE 200 (366)
Q Consensus 123 ~~~~~~-~f~~~vpgSFy~~lfp~-~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~ 200 (366)
.. ..+ -|.. +++.+-.+++ +++|++++..++|++. ..
T Consensus 130 ~~-~~~i~~~~---~D~~~l~~~~~~~FD~V~~~~~l~~l~---~~---------------------------------- 168 (252)
T 2gb4_A 130 SS-SGSISLYC---CSIFDLPRANIGKFDRIWDRGALVAIN---PG---------------------------------- 168 (252)
T ss_dssp ET-TSSEEEEE---SCTTTGGGGCCCCEEEEEESSSTTTSC---GG----------------------------------
T ss_pred cC-CCceEEEE---CccccCCcccCCCEEEEEEhhhhhhCC---HH----------------------------------
Confidence 00 112 2444 4776544543 8999999999999973 21
Q ss_pred HHHHHHHHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHH
Q 017747 201 DFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEV 280 (366)
Q Consensus 201 D~~~FL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i 280 (366)
+...+++.-++-|+|||+|++..+..+.. ...-|.+..+++|+.+.+
T Consensus 169 ~~~~~l~~~~~~LkpGG~l~l~~~~~~~~---------------------------------~~~g~~~~~~~~el~~~l 215 (252)
T 2gb4_A 169 DHDRYADIILSLLRKEFQYLVAVLSYDPT---------------------------------KHAGPPFYVPSAELKRLF 215 (252)
T ss_dssp GHHHHHHHHHHTEEEEEEEEEEEEECCTT---------------------------------SCCCSSCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCeEEEEEEEecCCc---------------------------------cCCCCCCCCCHHHHHHHh
Confidence 12345667789999999997665432210 011244557899999999
Q ss_pred hhcCceEEeeEEEEe
Q 017747 281 GREGSFKLDQLDMFQ 295 (366)
Q Consensus 281 ~~~gsf~i~~~e~~~ 295 (366)
+. + |++..++...
T Consensus 216 ~~-~-f~v~~~~~~~ 228 (252)
T 2gb4_A 216 GT-K-CSMQCLEEVD 228 (252)
T ss_dssp TT-T-EEEEEEEEEE
T ss_pred hC-C-eEEEEEeccc
Confidence 86 5 9998888654
|
| >3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=98.74 E-value=7.9e-08 Score=85.82 Aligned_cols=154 Identities=12% Similarity=0.099 Sum_probs=94.1
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+ .+ . + .+++..|+........-+. .. -
T Consensus 32 ~~~~vLdiG~G~G~~~~~l--------~~--------~-~-~~~~~~D~~~~~~~~~~~~----------------~~-~ 76 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAI--------KE--------N-G-TRVSGIEAFPEAAEQAKEK----------------LD-H 76 (230)
T ss_dssp TCSEEEEETCTTSHHHHHH--------HT--------T-T-CEEEEEESSHHHHHHHHTT----------------SS-E
T ss_pred CCCcEEEeCCCCCHHHHHH--------Hh--------c-C-CeEEEEeCCHHHHHHHHHh----------------CC-c
Confidence 4689999999999988642 11 1 3 7888889764321111110 11 1
Q ss_pred EEeccCCCccc--ccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYG--RLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 130 f~~~vpgSFy~--~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
+.. +++.+ .-++++++|+++++.++|++.+. ..+|+
T Consensus 77 ~~~---~d~~~~~~~~~~~~fD~v~~~~~l~~~~~~---------------------------------------~~~l~ 114 (230)
T 3cc8_A 77 VVL---GDIETMDMPYEEEQFDCVIFGDVLEHLFDP---------------------------------------WAVIE 114 (230)
T ss_dssp EEE---SCTTTCCCCSCTTCEEEEEEESCGGGSSCH---------------------------------------HHHHH
T ss_pred EEE---cchhhcCCCCCCCccCEEEECChhhhcCCH---------------------------------------HHHHH
Confidence 222 34433 34678999999999999997541 13456
Q ss_pred HHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhc-ccCccccCCCHHHHHHHHhhcCce
Q 017747 208 SRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLV-AYHAHFYAPSKEEIEGEVGREGSF 286 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d-~f~~P~y~ps~eEv~~~i~~~gsf 286 (366)
.-.+-|+|||+++++...... +..+.. +.... ....... .-.....+.+.+++.+.+++.| |
T Consensus 115 ~~~~~L~~gG~l~~~~~~~~~-----------~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G-f 177 (230)
T 3cc8_A 115 KVKPYIKQNGVILASIPNVSH-----------ISVLAP----LLAGN-WTYTEYGLLDKTHIRFFTFNEMLRMFLKAG-Y 177 (230)
T ss_dssp HTGGGEEEEEEEEEEEECTTS-----------HHHHHH----HHTTC-CCCBSSSTTBTTCCCCCCHHHHHHHHHHTT-E
T ss_pred HHHHHcCCCCEEEEEeCCcch-----------HHHHHH----HhcCC-ceeccCCCCCcceEEEecHHHHHHHHHHcC-C
Confidence 668899999999999865432 111111 11111 1111000 0112345679999999999999 9
Q ss_pred EEeeEEEEeec
Q 017747 287 KLDQLDMFQVE 297 (366)
Q Consensus 287 ~i~~~e~~~~~ 297 (366)
++.+.+.+...
T Consensus 178 ~~~~~~~~~~~ 188 (230)
T 3cc8_A 178 SISKVDRVYVD 188 (230)
T ss_dssp EEEEEEEEECC
T ss_pred eEEEEEecccC
Confidence 99887776544
|
| >3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440} | Back alignment and structure |
|---|
Probab=98.74 E-value=5.5e-08 Score=86.70 Aligned_cols=156 Identities=14% Similarity=0.040 Sum_probs=90.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
.+.+|+|+|||+|..+.. +.+. ..+++..|+........- .. + ...
T Consensus 52 ~~~~vLdiG~G~G~~~~~--------l~~~----------~~~v~~vD~s~~~~~~a~-----------~~-~----~~~ 97 (227)
T 3e8s_A 52 QPERVLDLGCGEGWLLRA--------LADR----------GIEAVGVDGDRTLVDAAR-----------AA-G----AGE 97 (227)
T ss_dssp CCSEEEEETCTTCHHHHH--------HHTT----------TCEEEEEESCHHHHHHHH-----------HT-C----SSC
T ss_pred CCCEEEEeCCCCCHHHHH--------HHHC----------CCEEEEEcCCHHHHHHHH-----------Hh-c----ccc
Confidence 458999999999998864 2111 268899998643221111 11 0 112
Q ss_pred EEeccCCCccccc-CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRL-FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 130 f~~~vpgSFy~~l-fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
+..+...++-... .+.+++|+++++.++| ..+ | ..+|+.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~-~~~-~--------------------------------------~~~l~~ 137 (227)
T 3e8s_A 98 VHLASYAQLAEAKVPVGKDYDLICANFALL-HQD-I--------------------------------------IELLSA 137 (227)
T ss_dssp EEECCHHHHHTTCSCCCCCEEEEEEESCCC-SSC-C--------------------------------------HHHHHH
T ss_pred cchhhHHhhcccccccCCCccEEEECchhh-hhh-H--------------------------------------HHHHHH
Confidence 2332111111123 3455699999999999 222 1 134566
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEE
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKL 288 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i 288 (366)
-.+-|+|||++++........... . +...|......+. .-.-...+.++++.+|+.+.+++.| |++
T Consensus 138 ~~~~L~pgG~l~~~~~~~~~~~~~--~-------~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~aG-f~~ 203 (227)
T 3e8s_A 138 MRTLLVPGGALVIQTLHPWSVADG--D-------YQDGWREESFAGF----AGDWQPMPWYFRTLASWLNALDMAG-LRL 203 (227)
T ss_dssp HHHTEEEEEEEEEEECCTTTTCTT--C-------CSCEEEEECCTTS----SSCCCCEEEEECCHHHHHHHHHHTT-EEE
T ss_pred HHHHhCCCeEEEEEecCccccCcc--c-------cccccchhhhhcc----ccCcccceEEEecHHHHHHHHHHcC-CeE
Confidence 789999999999998876543110 0 0000000000000 0011256778999999999999999 999
Q ss_pred eeEEE
Q 017747 289 DQLDM 293 (366)
Q Consensus 289 ~~~e~ 293 (366)
.+++.
T Consensus 204 ~~~~~ 208 (227)
T 3e8s_A 204 VSLQE 208 (227)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 77665
|
| >3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A* | Back alignment and structure |
|---|
Probab=98.73 E-value=2.3e-07 Score=90.69 Aligned_cols=152 Identities=18% Similarity=0.184 Sum_probs=93.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+.. +.++ .|..+++..|+|. ....... .+++
T Consensus 201 ~~~~vlDvG~G~G~~~~~--------l~~~--------~p~~~~~~~D~~~-----~~~~a~~-------------~~~v 246 (364)
T 3p9c_A 201 GLGTLVDVGGGVGATVAA--------IAAH--------YPTIKGVNFDLPH-----VISEAPQ-------------FPGV 246 (364)
T ss_dssp TCSEEEEETCTTSHHHHH--------HHHH--------CTTCEEEEEECHH-----HHTTCCC-------------CTTE
T ss_pred CCCEEEEeCCCCCHHHHH--------HHHH--------CCCCeEEEecCHH-----HHHhhhh-------------cCCe
Confidence 468999999999998864 3332 3457889999852 1111110 1222
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
..+.++|++ -+|.+ |++++++++|..+. +|...+|+.-
T Consensus 247 --~~~~~D~~~-~~p~~--D~v~~~~vlh~~~d-------------------------------------~~~~~~L~~~ 284 (364)
T 3p9c_A 247 --THVGGDMFK-EVPSG--DTILMKWILHDWSD-------------------------------------QHCATLLKNC 284 (364)
T ss_dssp --EEEECCTTT-CCCCC--SEEEEESCGGGSCH-------------------------------------HHHHHHHHHH
T ss_pred --EEEeCCcCC-CCCCC--CEEEehHHhccCCH-------------------------------------HHHHHHHHHH
Confidence 234579887 67765 99999999985422 2345678888
Q ss_pred HHHhccCceEEEEeecCCCCCCCCCCchhHHH-HHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEE
Q 017747 210 SEELVVGGRMVLILLGRIGPDHVDRGNSFFWE-LLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKL 288 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~-~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i 288 (366)
++-|+|||++++.=...++... . ...+. ....-+.-|+. ...-..+|.+|++++++++| |++
T Consensus 285 ~~~L~pgG~l~i~e~~~~~~~~---~-~~~~~~~~~~d~~m~~~------------~~~g~~rt~~e~~~ll~~AG-F~~ 347 (364)
T 3p9c_A 285 YDALPAHGKVVLVQCILPVNPE---A-NPSSQGVFHVDMIMLAH------------NPGGRERYEREFQALARGAG-FTG 347 (364)
T ss_dssp HHHSCTTCEEEEEECCBCSSCC---S-SHHHHHHHHHHHHHHHH------------CSSCCCCBHHHHHHHHHHTT-CCE
T ss_pred HHHcCCCCEEEEEEeccCCCCC---c-chhhhhHHHhHHHHHhc------------ccCCccCCHHHHHHHHHHCC-Cce
Confidence 9999999999987554433211 0 11111 01111111110 11123468999999999999 988
Q ss_pred eeEEEE
Q 017747 289 DQLDMF 294 (366)
Q Consensus 289 ~~~e~~ 294 (366)
.++...
T Consensus 348 v~~~~~ 353 (364)
T 3p9c_A 348 VKSTYI 353 (364)
T ss_dssp EEEEEE
T ss_pred EEEEEc
Confidence 766543
|
| >1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41 | Back alignment and structure |
|---|
Probab=98.73 E-value=3e-07 Score=82.60 Aligned_cols=97 Identities=14% Similarity=0.158 Sum_probs=65.3
Q ss_pred CcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 017747 137 SFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVG 216 (366)
Q Consensus 137 SFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~G 216 (366)
++..-.++++++|+++++.++||+.+. ..+|+.-.+-|+||
T Consensus 92 d~~~~~~~~~~fD~v~~~~~l~~~~~~---------------------------------------~~~l~~~~~~L~pg 132 (219)
T 1vlm_A 92 TAENLPLKDESFDFALMVTTICFVDDP---------------------------------------ERALKEAYRILKKG 132 (219)
T ss_dssp BTTBCCSCTTCEEEEEEESCGGGSSCH---------------------------------------HHHHHHHHHHEEEE
T ss_pred ccccCCCCCCCeeEEEEcchHhhccCH---------------------------------------HHHHHHHHHHcCCC
Confidence 444434678899999999999997431 13455667889999
Q ss_pred ceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEeeEEEE
Q 017747 217 GRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLDMF 294 (366)
Q Consensus 217 G~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~~~e~~ 294 (366)
|++++..+...+ .+. ..+..+ ..+ ..+.....+.+.+++.+.+++.| |++......
T Consensus 133 G~l~i~~~~~~~----------~~~---~~~~~~-~~~-------~~~~~~~~~~~~~~l~~~l~~~G-f~~~~~~~~ 188 (219)
T 1vlm_A 133 GYLIVGIVDRES----------FLG---REYEKN-KEK-------SVFYKNARFFSTEELMDLMRKAG-FEEFKVVQT 188 (219)
T ss_dssp EEEEEEEECSSS----------HHH---HHHHHT-TTC--------CCSTTCCCCCHHHHHHHHHHTT-CEEEEEEEE
T ss_pred cEEEEEEeCCcc----------HHH---HHHHHH-hcC-------cchhcccccCCHHHHHHHHHHCC-CeEEEEecc
Confidence 999999875532 111 111111 111 22334556789999999999999 998776654
|
| >2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.72 E-value=1.3e-06 Score=83.62 Aligned_cols=152 Identities=18% Similarity=0.213 Sum_probs=92.4
Q ss_pred eEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceEE
Q 017747 52 INIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVYI 131 (366)
Q Consensus 52 ~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~ 131 (366)
.+|+|+|||+|..+.. +.++ .|..+++..|+ .......-+.+... .+ ..++
T Consensus 169 ~~vlDvG~G~G~~~~~--------l~~~--------~p~~~~~~~D~-~~~~~~a~~~~~~~--~~--------~~~v-- 219 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKA--------ILQA--------EPSARGVMLDR-EGSLGVARDNLSSL--LA--------GERV-- 219 (334)
T ss_dssp CEEEEETCTTCHHHHH--------HHHH--------CTTCEEEEEEC-TTCTHHHHHHTHHH--HH--------TTSE--
T ss_pred CEEEEeCCCchHHHHH--------HHHH--------CCCCEEEEeCc-HHHHHHHHHHHhhc--CC--------CCcE--
Confidence 8999999999998764 3232 24478999999 54444433333210 00 1122
Q ss_pred eccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017747 132 AGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSE 211 (366)
Q Consensus 132 ~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~ 211 (366)
..+.++|.+ .+| +++|++++.+.+|-. +. .+...+|+.-.+
T Consensus 220 ~~~~~d~~~-~~~-~~~D~v~~~~vl~~~---~~----------------------------------~~~~~~l~~~~~ 260 (334)
T 2ip2_A 220 SLVGGDMLQ-EVP-SNGDIYLLSRIIGDL---DE----------------------------------AASLRLLGNCRE 260 (334)
T ss_dssp EEEESCTTT-CCC-SSCSEEEEESCGGGC---CH----------------------------------HHHHHHHHHHHH
T ss_pred EEecCCCCC-CCC-CCCCEEEEchhccCC---CH----------------------------------HHHHHHHHHHHH
Confidence 223468877 355 789999999999832 21 123456778889
Q ss_pred HhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEeeE
Q 017747 212 ELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQL 291 (366)
Q Consensus 212 EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~~~ 291 (366)
-|+|||++++.-...++... ......++ +.-|...+ -..++.+|+++++++.| |++.+.
T Consensus 261 ~L~pgG~l~i~e~~~~~~~~--~~~~~~~~-----~~~~~~~~-------------~~~~t~~e~~~ll~~aG-f~~~~~ 319 (334)
T 2ip2_A 261 AMAGDGRVVVIERTISASEP--SPMSVLWD-----VHLFMACA-------------GRHRTTEEVVDLLGRGG-FAVERI 319 (334)
T ss_dssp HSCTTCEEEEEECCBCSSSC--CHHHHHHH-----HHHHHHHS-------------CCCCBHHHHHHHHHHTT-EEEEEE
T ss_pred hcCCCCEEEEEEeccCCCCC--cchhHHhh-----hHhHhhCC-------------CcCCCHHHHHHHHHHCC-CceeEE
Confidence 99999999998665443211 00011122 11111111 13468999999999999 988665
Q ss_pred E
Q 017747 292 D 292 (366)
Q Consensus 292 e 292 (366)
.
T Consensus 320 ~ 320 (334)
T 2ip2_A 320 V 320 (334)
T ss_dssp E
T ss_pred E
Confidence 4
|
| >3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=98.70 E-value=1.6e-07 Score=91.66 Aligned_cols=160 Identities=13% Similarity=0.189 Sum_probs=94.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+.. +.++ .|..+++..|+|. .....-+.+. ..+. .+++
T Consensus 179 ~~~~vlDvG~G~G~~~~~--------l~~~--------~p~~~~~~~D~~~-~~~~a~~~~~--------~~~~--~~~v 231 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQ--------CVQY--------NKEVEVTIVDLPQ-QLEMMRKQTA--------GLSG--SERI 231 (363)
T ss_dssp CCSEEEEESCTTCHHHHH--------HHHH--------STTCEEEEEECHH-HHHHHHHHHT--------TCTT--GGGE
T ss_pred CCCEEEEeCCCcCHHHHH--------HHHh--------CCCCEEEEEeCHH-HHHHHHHHHH--------hcCc--ccce
Confidence 468999999999998874 3332 2458999999852 2111111111 0111 0122
Q ss_pred EEeccCCCcccc--cCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGR--LFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 130 f~~~vpgSFy~~--lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
..+.++|++. .+| +++|++++++.+|.++. .+...+|+
T Consensus 232 --~~~~~d~~~~~~~~p-~~~D~v~~~~vlh~~~~-------------------------------------~~~~~~l~ 271 (363)
T 3dp7_A 232 --HGHGANLLDRDVPFP-TGFDAVWMSQFLDCFSE-------------------------------------EEVISILT 271 (363)
T ss_dssp --EEEECCCCSSSCCCC-CCCSEEEEESCSTTSCH-------------------------------------HHHHHHHH
T ss_pred --EEEEccccccCCCCC-CCcCEEEEechhhhCCH-------------------------------------HHHHHHHH
Confidence 2344688764 356 89999999999985432 23456678
Q ss_pred HHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceE
Q 017747 208 SRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFK 287 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~ 287 (366)
.-.+-|+|||++++.-...++... ....+. +.....+|... ....-..++.+|++++++++| |+
T Consensus 272 ~~~~~L~pgG~l~i~e~~~~~~~~----~~~~~~-~~~~~~~~~~~----------~~~~~~~~t~~e~~~ll~~AG-f~ 335 (363)
T 3dp7_A 272 RVAQSIGKDSKVYIMETLWDRQRY----ETASYC-LTQISLYFTAM----------ANGNSKMFHSDDLIRCIENAG-LE 335 (363)
T ss_dssp HHHHHCCTTCEEEEEECCTTSCSS----HHHHHH-HHHHHHHHHHS----------SCSSCCSCCHHHHHHHHHTTT-EE
T ss_pred HHHHhcCCCcEEEEEeeccCCccc----cchhhH-HHHhhhhHHhh----------hCCCCcccCHHHHHHHHHHcC-Ce
Confidence 888999999999987544433211 011111 11111111000 112234569999999999999 88
Q ss_pred EeeEE
Q 017747 288 LDQLD 292 (366)
Q Consensus 288 i~~~e 292 (366)
+.++.
T Consensus 336 ~v~~~ 340 (363)
T 3dp7_A 336 VEEIQ 340 (363)
T ss_dssp ESCCC
T ss_pred EEEEE
Confidence 86554
|
| >2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.70 E-value=2.4e-07 Score=82.26 Aligned_cols=134 Identities=16% Similarity=0.212 Sum_probs=84.4
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcc-eEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEF-HFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~-~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
...+|+|+|||+|..+..+ .. +++..|+........-+..+ .-
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---------------------~~~~v~~vD~s~~~~~~a~~~~~---------------~~ 79 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---------------------PYPQKVGVEPSEAMLAVGRRRAP---------------EA 79 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---------------------CCSEEEEECCCHHHHHHHHHHCT---------------TS
T ss_pred CCCeEEEECCCCCHhHHhC---------------------CCCeEEEEeCCHHHHHHHHHhCC---------------Cc
Confidence 5689999999999987531 14 78888986533222221110 11
Q ss_pred eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
.++. +++.+-.+|++++|+++++.++||+.+. ..+|+.
T Consensus 80 ~~~~---~d~~~~~~~~~~fD~v~~~~~l~~~~~~---------------------------------------~~~l~~ 117 (211)
T 2gs9_A 80 TWVR---AWGEALPFPGESFDVVLLFTTLEFVEDV---------------------------------------ERVLLE 117 (211)
T ss_dssp EEEC---CCTTSCCSCSSCEEEEEEESCTTTCSCH---------------------------------------HHHHHH
T ss_pred EEEE---cccccCCCCCCcEEEEEEcChhhhcCCH---------------------------------------HHHHHH
Confidence 2333 3454444788999999999999997531 134566
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHh
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVG 281 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~ 281 (366)
-.+-|+|||+++++.+.+.+ .|... +..+...| ........+.|++|++++++
T Consensus 118 ~~~~L~pgG~l~i~~~~~~~----------~~~~~---~~~~~~~~-------~~~~~~~~~~s~~~l~~~l~ 170 (211)
T 2gs9_A 118 ARRVLRPGGALVVGVLEALS----------PWAAL---YRRLGEKG-------VLPWAQARFLAREDLKALLG 170 (211)
T ss_dssp HHHHEEEEEEEEEEEECTTS----------HHHHH---HHHHHHTT-------CTTGGGCCCCCHHHHHHHHC
T ss_pred HHHHcCCCCEEEEEecCCcC----------cHHHH---HHHHhhcc-------CccccccccCCHHHHHHHhc
Confidence 68899999999999876643 22212 11111222 11122345789999999999
|
| >3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A* | Back alignment and structure |
|---|
Probab=98.69 E-value=6.7e-07 Score=87.36 Aligned_cols=154 Identities=19% Similarity=0.233 Sum_probs=94.1
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+...+|+|+|||+|..+.. +.++ .|..+++.-|+|. .....-+.+ . ..+. ..+
T Consensus 201 ~~~~~vlDvG~G~G~~~~~--------l~~~--------~p~~~~~~~D~~~-~~~~a~~~~-------~-~~~l--~~~ 253 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAA--------VLDA--------FPGLRGTLLERPP-VAEEARELL-------T-GRGL--ADR 253 (369)
T ss_dssp TTCSEEEEETCTTSHHHHH--------HHHH--------CTTCEEEEEECHH-HHHHHHHHH-------H-HTTC--TTT
T ss_pred ccCcEEEEeCCCccHHHHH--------HHHH--------CCCCeEEEEcCHH-HHHHHHHhh-------h-hcCc--CCc
Confidence 3568999999999998764 3332 2457889999842 222111111 1 1111 112
Q ss_pred eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
+ ..+.++|+ ..+|. ++|++++.+.+|+.++ .+...+|+.
T Consensus 254 v--~~~~~d~~-~~~p~-~~D~v~~~~vlh~~~d-------------------------------------~~~~~~L~~ 292 (369)
T 3gwz_A 254 C--EILPGDFF-ETIPD-GADVYLIKHVLHDWDD-------------------------------------DDVVRILRR 292 (369)
T ss_dssp E--EEEECCTT-TCCCS-SCSEEEEESCGGGSCH-------------------------------------HHHHHHHHH
T ss_pred e--EEeccCCC-CCCCC-CceEEEhhhhhccCCH-------------------------------------HHHHHHHHH
Confidence 3 22346887 45666 8999999999998543 122356778
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEE
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKL 288 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i 288 (366)
-++-|+|||++++.-...++.... ....++ +.-|+..| -..++.+|+++++++.| |++
T Consensus 293 ~~~~L~pgG~l~i~e~~~~~~~~~---~~~~~d-----~~~~~~~~-------------g~~~t~~e~~~ll~~aG-f~~ 350 (369)
T 3gwz_A 293 IATAMKPDSRLLVIDNLIDERPAA---STLFVD-----LLLLVLVG-------------GAERSESEFAALLEKSG-LRV 350 (369)
T ss_dssp HHTTCCTTCEEEEEEEBCCSSCCH---HHHHHH-----HHHHHHHS-------------CCCBCHHHHHHHHHTTT-EEE
T ss_pred HHHHcCCCCEEEEEEeccCCCCCC---chhHhh-----HHHHhhcC-------------CccCCHHHHHHHHHHCC-CeE
Confidence 899999999999986655443110 011111 11111111 13578999999999999 988
Q ss_pred eeEE
Q 017747 289 DQLD 292 (366)
Q Consensus 289 ~~~e 292 (366)
.++.
T Consensus 351 ~~~~ 354 (369)
T 3gwz_A 351 ERSL 354 (369)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6664
|
| >2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A | Back alignment and structure |
|---|
Probab=98.66 E-value=9.4e-08 Score=84.39 Aligned_cols=144 Identities=13% Similarity=0.081 Sum_probs=93.1
Q ss_pred EEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceEEe
Q 017747 53 NIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVYIA 132 (366)
Q Consensus 53 ~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~~ 132 (366)
+|+|+|||+|..+..+ .+ . ..+++..|+.......+-+.+. . .+ ..-.|..
T Consensus 32 ~vLdiGcG~G~~~~~l--------~~---------~-~~~v~~vD~s~~~~~~a~~~~~-------~-~~---~~~~~~~ 82 (202)
T 2kw5_A 32 KILCLAEGEGRNACFL--------AS---------L-GYEVTAVDQSSVGLAKAKQLAQ-------E-KG---VKITTVQ 82 (202)
T ss_dssp EEEECCCSCTHHHHHH--------HT---------T-TCEEEEECSSHHHHHHHHHHHH-------H-HT---CCEEEEC
T ss_pred CEEEECCCCCHhHHHH--------Hh---------C-CCeEEEEECCHHHHHHHHHHHH-------h-cC---CceEEEE
Confidence 9999999999988642 11 1 2688999986533222221111 1 01 1112332
Q ss_pred ccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017747 133 GYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEE 212 (366)
Q Consensus 133 ~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~E 212 (366)
+++.+-.+|++++|+++++. .|| + ..|...+|+.-.+-
T Consensus 83 ---~d~~~~~~~~~~fD~v~~~~-~~~----~----------------------------------~~~~~~~l~~~~~~ 120 (202)
T 2kw5_A 83 ---SNLADFDIVADAWEGIVSIF-CHL----P----------------------------------SSLRQQLYPKVYQG 120 (202)
T ss_dssp ---CBTTTBSCCTTTCSEEEEEC-CCC----C----------------------------------HHHHHHHHHHHHTT
T ss_pred ---cChhhcCCCcCCccEEEEEh-hcC----C----------------------------------HHHHHHHHHHHHHh
Confidence 45555457889999999853 343 1 12455667788899
Q ss_pred hccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEeeEE
Q 017747 213 LVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLD 292 (366)
Q Consensus 213 L~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~~~e 292 (366)
|+|||++++......+.. + ..| ....+.++.+++|+++.++ | |++..++
T Consensus 121 L~pgG~l~~~~~~~~~~~-------~-------------~~~--------~~~~~~~~~~~~~l~~~l~--G-f~v~~~~ 169 (202)
T 2kw5_A 121 LKPGGVFILEGFAPEQLQ-------Y-------------NTG--------GPKDLDLLPKLETLQSELP--S-LNWLIAN 169 (202)
T ss_dssp CCSSEEEEEEEECTTTGG-------G-------------TSC--------CSSSGGGCCCHHHHHHHCS--S-SCEEEEE
T ss_pred cCCCcEEEEEEecccccc-------C-------------CCC--------CCCcceeecCHHHHHHHhc--C-ceEEEEE
Confidence 999999999998765420 0 011 1234578899999999999 7 9999988
Q ss_pred EEeecc
Q 017747 293 MFQVER 298 (366)
Q Consensus 293 ~~~~~~ 298 (366)
....+.
T Consensus 170 ~~~~~~ 175 (202)
T 2kw5_A 170 NLERNL 175 (202)
T ss_dssp EEEEEC
T ss_pred EEEeec
Confidence 876653
|
| >2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A* | Back alignment and structure |
|---|
Probab=98.66 E-value=1.4e-07 Score=86.44 Aligned_cols=163 Identities=13% Similarity=0.120 Sum_probs=97.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhH---------HHHhhh
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFH---------RQLRNE 120 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~---------~~~~~~ 120 (366)
+..+|+|+|||+|..++.+. + ..+ .+|+..|+..+....+-+.+.... +.+...
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~--------~--------~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~ 118 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSA--------C--------ESF-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDL 118 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTG--------G--------GTE-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHh--------h--------ccc-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcc
Confidence 46899999999999986421 1 112 478899987654443332221100 000000
Q ss_pred cCCCC-C--------C-c-eEEeccCCCccccc-CCC---CcccEEEcccccccccCCCCcccccccCCCccccEEEcCC
Q 017747 121 RGGGS-S--------P-S-VYIAGYPGSFYGRL-FPN---NSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISES 185 (366)
Q Consensus 121 ~~~~~-~--------~-~-~f~~~vpgSFy~~l-fp~---~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~ 185 (366)
.+... . . - -|.. +++.+.. +++ +++|+++++.++|++.. .+
T Consensus 119 ~~~~~~~~~~~~~l~~~v~~~~~---~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~---~~------------------ 174 (265)
T 2i62_A 119 EGNRMKGPEKEEKLRRAIKQVLK---CDVTQSQPLGGVSLPPADCLLSTLCLDAACP---DL------------------ 174 (265)
T ss_dssp TTTCSCHHHHHHHHHHHEEEEEE---CCTTSSSTTTTCCCCCEEEEEEESCHHHHCS---SH------------------
T ss_pred cccccchHHHHHHhhhhheeEEE---eeeccCCCCCccccCCccEEEEhhhhhhhcC---Ch------------------
Confidence 00000 0 0 0 2332 3554432 356 89999999999997532 11
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccC
Q 017747 186 SPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYH 265 (366)
Q Consensus 186 s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~ 265 (366)
.|...+|+.-.+-|+|||+|++......+. + ..| ...
T Consensus 175 --------------~~~~~~l~~~~~~LkpgG~li~~~~~~~~~--------~-------------~~~--------~~~ 211 (265)
T 2i62_A 175 --------------PAYRTALRNLGSLLKPGGFLVMVDALKSSY--------Y-------------MIG--------EQK 211 (265)
T ss_dssp --------------HHHHHHHHHHHTTEEEEEEEEEEEESSCCE--------E-------------EET--------TEE
T ss_pred --------------HHHHHHHHHHHhhCCCCcEEEEEecCCCce--------E-------------EcC--------Ccc
Confidence 245567778889999999999987432210 0 011 112
Q ss_pred ccccCCCHHHHHHHHhhcCceEEeeEEEEeec
Q 017747 266 AHFYAPSKEEIEGEVGREGSFKLDQLDMFQVE 297 (366)
Q Consensus 266 ~P~y~ps~eEv~~~i~~~gsf~i~~~e~~~~~ 297 (366)
.+.+..+.+++.+.+++.| |++..++.....
T Consensus 212 ~~~~~~~~~~~~~~l~~aG-f~~~~~~~~~~~ 242 (265)
T 2i62_A 212 FSSLPLGWETVRDAVEEAG-YTIEQFEVISQN 242 (265)
T ss_dssp EECCCCCHHHHHHHHHHTT-CEEEEEEEECCC
T ss_pred ccccccCHHHHHHHHHHCC-CEEEEEEEeccc
Confidence 3445678999999999999 999888876544
|
| >4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A | Back alignment and structure |
|---|
Probab=98.64 E-value=2.7e-07 Score=90.64 Aligned_cols=118 Identities=15% Similarity=0.158 Sum_probs=73.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcC-CCCCCc
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERG-GGSSPS 128 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~-~~~~~~ 128 (366)
...+|+|+|||+|..+..+.... .|..+|+..|+.......+-+.+..... ...| .. .++
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~---------------~~~~~v~gvD~s~~~l~~a~~~~~~~~~---~~~g~~~-~~~ 143 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLV---------------GEHGKVIGVDMLDNQLEVARKYVEYHAE---KFFGSPS-RSN 143 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH---------------TTTCEEEEEECCHHHHHHHHHTHHHHHH---HHHSSTT-CCC
T ss_pred CCCEEEEecCccCHHHHHHHHHh---------------CCCCEEEEEECCHHHHHHHHHHHHHhhh---hcccccC-CCc
Confidence 35799999999999987532221 1347999999965433332222111000 0001 00 123
Q ss_pred e-EEeccCCCcccc------cCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYGR------LFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQED 201 (366)
Q Consensus 129 ~-f~~~vpgSFy~~------lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D 201 (366)
+ |+. +++.+- .+|++++|+++|+.++||+.+.
T Consensus 144 v~~~~---~d~~~l~~~~~~~~~~~~fD~V~~~~~l~~~~d~-------------------------------------- 182 (383)
T 4fsd_A 144 VRFLK---GFIENLATAEPEGVPDSSVDIVISNCVCNLSTNK-------------------------------------- 182 (383)
T ss_dssp EEEEE---SCTTCGGGCBSCCCCTTCEEEEEEESCGGGCSCH--------------------------------------
T ss_pred eEEEE---ccHHHhhhcccCCCCCCCEEEEEEccchhcCCCH--------------------------------------
Confidence 3 444 355433 6789999999999999996441
Q ss_pred HHHHHHHHHHHhccCceEEEEeecCCC
Q 017747 202 FTLFLRSRSEELVVGGRMVLILLGRIG 228 (366)
Q Consensus 202 ~~~FL~~Ra~EL~~GG~lvl~~~g~~~ 228 (366)
..+|+.-.+-|+|||+|+++.+....
T Consensus 183 -~~~l~~~~r~LkpgG~l~i~~~~~~~ 208 (383)
T 4fsd_A 183 -LALFKEIHRVLRDGGELYFSDVYADR 208 (383)
T ss_dssp -HHHHHHHHHHEEEEEEEEEEEEEESS
T ss_pred -HHHHHHHHHHcCCCCEEEEEEecccc
Confidence 23456668899999999998776543
|
| >2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus} | Back alignment and structure |
|---|
Probab=98.63 E-value=7.9e-08 Score=91.86 Aligned_cols=181 Identities=13% Similarity=0.143 Sum_probs=99.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCC---C
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGS---S 126 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~---~ 126 (366)
...+|+|+|||+|..+... + . ....+|+..|+....-...-+..+. .+... .
T Consensus 48 ~~~~VLDlGCG~G~~l~~~-------~-~---------~~~~~v~GiD~S~~~l~~A~~~~~~--------~~~~~~~~~ 102 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKY-------F-Y---------GEIALLVATDPDADAIARGNERYNK--------LNSGIKTKY 102 (302)
T ss_dssp SCCEEEETTCTTTTTHHHH-------H-H---------TTCSEEEEEESCHHHHHHHHHHHHH--------HCC----CC
T ss_pred CCCeEEEEecCCcHhHHHH-------H-h---------cCCCeEEEEECCHHHHHHHHHHHHh--------ccccccccc
Confidence 4589999999999876421 1 1 0126899999987544433322111 00000 0
Q ss_pred -CceEEec-cCCCcc-cc---cCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHH
Q 017747 127 -PSVYIAG-YPGSFY-GR---LFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQE 200 (366)
Q Consensus 127 -~~~f~~~-vpgSFy-~~---lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~ 200 (366)
.--|..+ +-++-+ +. .+|++++|++.|..++||+-..+.
T Consensus 103 ~~~~f~~~d~~~d~~~~~l~~~~~~~~FD~V~~~~~lhy~~~~~~----------------------------------- 147 (302)
T 2vdw_A 103 YKFDYIQETIRSDTFVSSVREVFYFGKFNIIDWQFAIHYSFHPRH----------------------------------- 147 (302)
T ss_dssp CEEEEEECCTTSSSHHHHHHTTCCSSCEEEEEEESCGGGTCSTTT-----------------------------------
T ss_pred cccchhhhhcccchhhhhhhccccCCCeeEEEECchHHHhCCHHH-----------------------------------
Confidence 0113333 333333 22 368899999999999999754221
Q ss_pred HHHHHHHHHHHHhccCceEEEEeecCCCCCCCCCCchh-HHHH-H-HHHHHHHHHcCccchhh-------hcccCccccC
Q 017747 201 DFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSF-FWEL-L-SRSLAILVSQGEIEKEK-------LVAYHAHFYA 270 (366)
Q Consensus 201 D~~~FL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~-~~~~-l-~~al~~mv~eG~i~~e~-------~d~f~~P~y~ 270 (366)
...+|+.-++-|+|||+|+++++.+............ ++.. . ...|. .-..++.+. -..-..|-|+
T Consensus 148 -~~~~l~~~~r~LkpGG~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~e~~ 223 (302)
T 2vdw_A 148 -YATVMNNLSELTASGGKVLITTMDGDKLSKLTDKKTFIIHKNLPSSENYM---SVEKIADDRIVVYNPSTMSTPMTEYI 223 (302)
T ss_dssp -HHHHHHHHHHHEEEEEEEEEEEECHHHHTTCCSCEEEECCSSSCTTTSEE---EECEEETTEEEEBCTTTBSSCEEEEC
T ss_pred -HHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHhcCCccccccccccccee---eeccccccccceeeccccCCCceeee
Confidence 1356788899999999999998765331100000000 0000 0 00000 000000000 0123456688
Q ss_pred CCHHHHHHHHhhcCceEEeeEEEEe
Q 017747 271 PSKEEIEGEVGREGSFKLDQLDMFQ 295 (366)
Q Consensus 271 ps~eEv~~~i~~~gsf~i~~~e~~~ 295 (366)
-+++|+.+.+++.| |++.....|.
T Consensus 224 v~~~el~~l~~~~G-l~lv~~~~f~ 247 (302)
T 2vdw_A 224 IKKNDIVRVFNEYG-FVLVDNVDFA 247 (302)
T ss_dssp CCHHHHHHHHHHTT-EEEEEEEEHH
T ss_pred eEHHHHHHHHHHCC-CEEEEecChH
Confidence 89999999999999 8886665543
|
| >3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A | Back alignment and structure |
|---|
Probab=98.63 E-value=2.3e-07 Score=83.08 Aligned_cols=113 Identities=12% Similarity=-0.002 Sum_probs=69.5
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+.. +.+ ..|..+++..|+........-+.+.... +.... . ..--
T Consensus 29 ~~~~vLDiGcG~G~~~~~--------l~~--------~~~~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~~-~--~~v~ 87 (219)
T 3jwg_A 29 NAKKVIDLGCGEGNLLSL--------LLK--------DKSFEQITGVDVSYSVLERAKDRLKIDR--LPEMQ-R--KRIS 87 (219)
T ss_dssp TCCEEEEETCTTCHHHHH--------HHT--------STTCCEEEEEESCHHHHHHHHHHHTGGG--SCHHH-H--TTEE
T ss_pred CCCEEEEecCCCCHHHHH--------HHh--------cCCCCEEEEEECCHHHHHHHHHHHHhhc--ccccc-C--cceE
Confidence 457999999999998864 222 1234789999987644333332221100 00000 0 0122
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
|+. +++....++++++|+++++.++||++. .++..+|+.-
T Consensus 88 ~~~---~d~~~~~~~~~~fD~V~~~~~l~~~~~-------------------------------------~~~~~~l~~~ 127 (219)
T 3jwg_A 88 LFQ---SSLVYRDKRFSGYDAATVIEVIEHLDE-------------------------------------NRLQAFEKVL 127 (219)
T ss_dssp EEE---CCSSSCCGGGTTCSEEEEESCGGGCCH-------------------------------------HHHHHHHHHH
T ss_pred EEe---CcccccccccCCCCEEEEHHHHHhCCH-------------------------------------HHHHHHHHHH
Confidence 333 355444467789999999999999732 2345677888
Q ss_pred HHHhccCceEEEEe
Q 017747 210 SEELVVGGRMVLIL 223 (366)
Q Consensus 210 a~EL~~GG~lvl~~ 223 (366)
.+-|+|||.++.+.
T Consensus 128 ~~~LkpgG~~i~~~ 141 (219)
T 3jwg_A 128 FEFTRPQTVIVSTP 141 (219)
T ss_dssp HTTTCCSEEEEEEE
T ss_pred HHhhCCCEEEEEcc
Confidence 99999999655543
|
| >3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=98.63 E-value=1.9e-07 Score=81.00 Aligned_cols=128 Identities=18% Similarity=0.223 Sum_probs=84.1
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+...+|+|+|||+|..+..+ .+. ..+++..|........+-+.++ +.
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l--------~~~----------~~~v~~~D~~~~~~~~a~~~~~---------------~~ 91 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYL--------SKQ----------GHDVLGTDLDPILIDYAKQDFP---------------EA 91 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHH--------HHT----------TCEEEEEESCHHHHHHHHHHCT---------------TS
T ss_pred cCCCeEEEECCCCCHHHHHH--------HHC----------CCcEEEEcCCHHHHHHHHHhCC---------------CC
Confidence 35679999999999988642 221 1578888875432222211111 11
Q ss_pred eEEeccCCCcccccCCCCcccEEEcc-cccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSS-NSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~-~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
-++. +++.+-.+|++++|+++++ ..+|+++. .+...+|+
T Consensus 92 ~~~~---~d~~~~~~~~~~~D~i~~~~~~~~~~~~-------------------------------------~~~~~~l~ 131 (195)
T 3cgg_A 92 RWVV---GDLSVDQISETDFDLIVSAGNVMGFLAE-------------------------------------DGREPALA 131 (195)
T ss_dssp EEEE---CCTTTSCCCCCCEEEEEECCCCGGGSCH-------------------------------------HHHHHHHH
T ss_pred cEEE---cccccCCCCCCceeEEEECCcHHhhcCh-------------------------------------HHHHHHHH
Confidence 2333 3554444778899999998 67777421 23456677
Q ss_pred HHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceE
Q 017747 208 SRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFK 287 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~ 287 (366)
.-.+-|+|||++++....... .+.+++...+++.| |+
T Consensus 132 ~~~~~l~~~G~l~~~~~~~~~------------------------------------------~~~~~~~~~l~~~G-f~ 168 (195)
T 3cgg_A 132 NIHRALGADGRAVIGFGAGRG------------------------------------------WVFGDFLEVAERVG-LE 168 (195)
T ss_dssp HHHHHEEEEEEEEEEEETTSS------------------------------------------CCHHHHHHHHHHHT-EE
T ss_pred HHHHHhCCCCEEEEEeCCCCC------------------------------------------cCHHHHHHHHHHcC-CE
Confidence 888999999999998643210 57888999999998 88
Q ss_pred EeeEE
Q 017747 288 LDQLD 292 (366)
Q Consensus 288 i~~~e 292 (366)
+....
T Consensus 169 ~~~~~ 173 (195)
T 3cgg_A 169 LENAF 173 (195)
T ss_dssp EEEEE
T ss_pred Eeeee
Confidence 75543
|
| >3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A | Back alignment and structure |
|---|
Probab=98.63 E-value=1.7e-07 Score=83.87 Aligned_cols=110 Identities=13% Similarity=-0.020 Sum_probs=68.9
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCC---C
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGS---S 126 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~---~ 126 (366)
...+|+|+|||+|..+.. +.+. .+..+++..|+........-+.+.. .+... .
T Consensus 29 ~~~~vLDiGcG~G~~~~~--------l~~~--------~~~~~v~gvD~s~~~~~~a~~~~~~--------~~~~~~~~~ 84 (217)
T 3jwh_A 29 NARRVIDLGCGQGNLLKI--------LLKD--------SFFEQITGVDVSYRSLEIAQERLDR--------LRLPRNQWE 84 (217)
T ss_dssp TCCEEEEETCTTCHHHHH--------HHHC--------TTCSEEEEEESCHHHHHHHHHHHTT--------CCCCHHHHT
T ss_pred CCCEEEEeCCCCCHHHHH--------HHhh--------CCCCEEEEEECCHHHHHHHHHHHHH--------hcCCcccCc
Confidence 457999999999998874 2221 2337899999875443333222210 00000 0
Q ss_pred CceEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 127 PSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 127 ~~~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
.--|.. +++....++.+++|+++++.++||+.. .++..+|
T Consensus 85 ~v~~~~---~d~~~~~~~~~~fD~v~~~~~l~~~~~-------------------------------------~~~~~~l 124 (217)
T 3jwh_A 85 RLQLIQ---GALTYQDKRFHGYDAATVIEVIEHLDL-------------------------------------SRLGAFE 124 (217)
T ss_dssp TEEEEE---CCTTSCCGGGCSCSEEEEESCGGGCCH-------------------------------------HHHHHHH
T ss_pred ceEEEe---CCcccccccCCCcCEEeeHHHHHcCCH-------------------------------------HHHHHHH
Confidence 122333 344333456689999999999999732 2345677
Q ss_pred HHHHHHhccCceEEEEe
Q 017747 207 RSRSEELVVGGRMVLIL 223 (366)
Q Consensus 207 ~~Ra~EL~~GG~lvl~~ 223 (366)
+.-.+-|+|||+++++.
T Consensus 125 ~~~~~~LkpgG~li~~~ 141 (217)
T 3jwh_A 125 RVLFEFAQPKIVIVTTP 141 (217)
T ss_dssp HHHHTTTCCSEEEEEEE
T ss_pred HHHHHHcCCCEEEEEcc
Confidence 78889999999766654
|
| >3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=98.63 E-value=1.6e-07 Score=84.96 Aligned_cols=169 Identities=19% Similarity=0.223 Sum_probs=92.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+.. +.+. .. .+++..|+.......+-+... . .+--
T Consensus 43 ~~~~vLdiG~G~G~~~~~--------l~~~--------~~-~~v~~vD~s~~~~~~a~~~~~-----------~--~~~~ 92 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRW--------AHEH--------GA-SYVLGLDLSEKMLARARAAGP-----------D--TGIT 92 (243)
T ss_dssp TTCEEEEETCTTCHHHHH--------HHHT--------TC-SEEEEEESCHHHHHHHHHTSC-----------S--SSEE
T ss_pred CCCEEEEEcCcCCHHHHH--------HHHC--------CC-CeEEEEcCCHHHHHHHHHhcc-----------c--CCce
Confidence 457999999999998764 2221 11 288888986432222211111 0 1112
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
+.. +++.+-.+|++++|+++++.++|++.+. ..+|+.-
T Consensus 93 ~~~---~d~~~~~~~~~~fD~v~~~~~l~~~~~~---------------------------------------~~~l~~~ 130 (243)
T 3bkw_A 93 YER---ADLDKLHLPQDSFDLAYSSLALHYVEDV---------------------------------------ARLFRTV 130 (243)
T ss_dssp EEE---CCGGGCCCCTTCEEEEEEESCGGGCSCH---------------------------------------HHHHHHH
T ss_pred EEE---cChhhccCCCCCceEEEEeccccccchH---------------------------------------HHHHHHH
Confidence 333 4665545788999999999999997431 2345666
Q ss_pred HHHhccCceEEEEeecCCCCCCCCCCchhHHHHHH-HH--HHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCce
Q 017747 210 SEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLS-RS--LAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSF 286 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~-~a--l~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf 286 (366)
.+-|+|||+++++............. +..+... .. +.....++..... .-.-....|.++.+|+.+.++++| |
T Consensus 131 ~~~L~pgG~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~t~~~~~~~l~~aG-F 206 (243)
T 3bkw_A 131 HQALSPGGHFVFSTEHPIYMAPARPG--WAIDAEGRRTWPIDRYLVEGPRKTD-WLAKGVVKHHRTVGTTLNALIRSG-F 206 (243)
T ss_dssp HHHEEEEEEEEEEEECHHHHCCSSCS--CEECTTSCEEEEECCTTCCEEECTT-HHHHSCCEEECCHHHHHHHHHHTT-C
T ss_pred HHhcCcCcEEEEEeCCcccccCcCcc--eeecCCCceEEeecccccccceeee-eccCceEEEeccHHHHHHHHHHcC-C
Confidence 88999999999987543210000000 0000000 00 0000000000000 000034566789999999999999 9
Q ss_pred EEeeEEEE
Q 017747 287 KLDQLDMF 294 (366)
Q Consensus 287 ~i~~~e~~ 294 (366)
++..++..
T Consensus 207 ~~~~~~~~ 214 (243)
T 3bkw_A 207 AIEHVEEF 214 (243)
T ss_dssp EEEEEEEC
T ss_pred EeeeeccC
Confidence 98776643
|
| >3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=98.62 E-value=5.8e-07 Score=86.64 Aligned_cols=155 Identities=14% Similarity=0.154 Sum_probs=94.0
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceE
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVY 130 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 130 (366)
..+|+|+|||+|..+.. +.++ .|..+++.-|+|. .....-+.+. ..+. ..++
T Consensus 180 ~~~vlDvG~G~G~~~~~--------l~~~--------~p~~~~~~~D~~~-~~~~a~~~~~--------~~~~--~~~v- 231 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQ--------VLRR--------HPQLTGQIWDLPT-TRDAARKTIH--------AHDL--GGRV- 231 (352)
T ss_dssp CCEEEEETCTTCHHHHH--------HHHH--------CTTCEEEEEECGG-GHHHHHHHHH--------HTTC--GGGE-
T ss_pred CCEEEEeCCCcCHHHHH--------HHHh--------CCCCeEEEEECHH-HHHHHHHHHH--------hcCC--CCce-
Confidence 68999999999998864 3332 2448888999953 2221111111 1111 1122
Q ss_pred EeccCCCccccc-CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 131 IAGYPGSFYGRL-FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 131 ~~~vpgSFy~~l-fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
..+.++|++.. ++++++|+++++..+|++++ .+...+|+.-
T Consensus 232 -~~~~~d~~~~~~~~~~~~D~v~~~~vlh~~~~-------------------------------------~~~~~~l~~~ 273 (352)
T 3mcz_A 232 -EFFEKNLLDARNFEGGAADVVMLNDCLHYFDA-------------------------------------REAREVIGHA 273 (352)
T ss_dssp -EEEECCTTCGGGGTTCCEEEEEEESCGGGSCH-------------------------------------HHHHHHHHHH
T ss_pred -EEEeCCcccCcccCCCCccEEEEecccccCCH-------------------------------------HHHHHHHHHH
Confidence 22446776544 36677999999999998533 2345667888
Q ss_pred HHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEe
Q 017747 210 SEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLD 289 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~ 289 (366)
.+-|+|||++++.-...++... ...+..+..... |+.. .--..++.+|+++++++.| |++.
T Consensus 274 ~~~L~pgG~l~i~e~~~~~~~~-----~~~~~~~~~~~~-~~~~------------~~~~~~t~~e~~~ll~~aG-f~~~ 334 (352)
T 3mcz_A 274 AGLVKPGGALLILTMTMNDDRV-----TPALSADFSLHM-MVNT------------NHGELHPTPWIAGVVRDAG-LAVG 334 (352)
T ss_dssp HHTEEEEEEEEEEEECCCTTSS-----SSHHHHHHHHHH-HHHS------------TTCCCCCHHHHHHHHHHTT-CEEE
T ss_pred HHHcCCCCEEEEEEeccCCCCC-----CCchHHHhhHHH-HhhC------------CCCCcCCHHHHHHHHHHCC-Ccee
Confidence 9999999999998665544311 011111111111 1111 0112468999999999999 9886
Q ss_pred e
Q 017747 290 Q 290 (366)
Q Consensus 290 ~ 290 (366)
+
T Consensus 335 ~ 335 (352)
T 3mcz_A 335 E 335 (352)
T ss_dssp E
T ss_pred e
Confidence 6
|
| >4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A* | Back alignment and structure |
|---|
Probab=98.61 E-value=9.8e-07 Score=85.82 Aligned_cols=154 Identities=14% Similarity=0.103 Sum_probs=92.5
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
..-+|+|+|||+|..++. +.++ .|.++++.-|+|.- -.. ...........++
T Consensus 179 ~~~~v~DvGgG~G~~~~~--------l~~~--------~p~~~~~~~dlp~v--~~~----------a~~~~~~~~~~rv 230 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKE--------CMSL--------YPGCKITVFDIPEV--VWT----------AKQHFSFQEEEQI 230 (353)
T ss_dssp GCSEEEEETCTTSHHHHH--------HHHH--------CSSCEEEEEECHHH--HHH----------HHHHSCC--CCSE
T ss_pred cCCeEEeeCCCCCHHHHH--------HHHh--------CCCceeEeccCHHH--HHH----------HHHhhhhcccCce
Confidence 346899999999998764 4343 45688999999841 111 1111000001233
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
..++|+|++..+| ..|+++..+.||-.++ .+-..+|+..
T Consensus 231 --~~~~gD~~~~~~~--~~D~~~~~~vlh~~~d-------------------------------------~~~~~iL~~~ 269 (353)
T 4a6d_A 231 --DFQEGDFFKDPLP--EADLYILARVLHDWAD-------------------------------------GKCSHLLERI 269 (353)
T ss_dssp --EEEESCTTTSCCC--CCSEEEEESSGGGSCH-------------------------------------HHHHHHHHHH
T ss_pred --eeecCccccCCCC--CceEEEeeeecccCCH-------------------------------------HHHHHHHHHH
Confidence 3456899987555 4699999999995322 2334568888
Q ss_pred HHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEe
Q 017747 210 SEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLD 289 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~ 289 (366)
++-|+|||++++.=.-.++... ......+++ +.-|+.- .--.+|.+|++++++++| |++.
T Consensus 270 ~~al~pgg~lli~e~~~~~~~~-~~~~~~~~d-----l~ml~~~-------------~g~ert~~e~~~ll~~AG-f~~v 329 (353)
T 4a6d_A 270 YHTCKPGGGILVIESLLDEDRR-GPLLTQLYS-----LNMLVQT-------------EGQERTPTHYHMLLSSAG-FRDF 329 (353)
T ss_dssp HHHCCTTCEEEEEECCCCTTSC-CCHHHHHHH-----HHHHHSS-------------SCCCCCHHHHHHHHHHHT-CEEE
T ss_pred HhhCCCCCEEEEEEeeeCCCCC-CCHHHHHHH-----HHHHHhC-------------CCcCCCHHHHHHHHHHCC-CceE
Confidence 9999999999987543332211 000011122 1112111 113479999999999999 9876
Q ss_pred eEE
Q 017747 290 QLD 292 (366)
Q Consensus 290 ~~e 292 (366)
++.
T Consensus 330 ~v~ 332 (353)
T 4a6d_A 330 QFK 332 (353)
T ss_dssp EEE
T ss_pred EEE
Confidence 553
|
| >3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A* | Back alignment and structure |
|---|
Probab=98.58 E-value=1.4e-07 Score=84.23 Aligned_cols=107 Identities=13% Similarity=0.172 Sum_probs=71.3
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
....+|+|+|||+|..+..+ .+. ..+++..|+.......+-+.+. . .++
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l--------~~~----------~~~v~~vD~s~~~~~~a~~~~~-----------~--~~~ 98 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKL--------APH----------CKRLTVIDVMPRAIGRACQRTK-----------R--WSH 98 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHH--------GGG----------EEEEEEEESCHHHHHHHHHHTT-----------T--CSS
T ss_pred CCCCcEEEEcCCCCHHHHHH--------HHc----------CCEEEEEECCHHHHHHHHHhcc-----------c--CCC
Confidence 34689999999999988642 111 1578889986533332222221 1 122
Q ss_pred e-EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 129 ~-f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
+ |.. +++.+ +.|++++|+++++.++||+.+. .++..+|+
T Consensus 99 ~~~~~---~d~~~-~~~~~~fD~v~~~~~l~~~~~~------------------------------------~~~~~~l~ 138 (216)
T 3ofk_A 99 ISWAA---TDILQ-FSTAELFDLIVVAEVLYYLEDM------------------------------------TQMRTAID 138 (216)
T ss_dssp EEEEE---CCTTT-CCCSCCEEEEEEESCGGGSSSH------------------------------------HHHHHHHH
T ss_pred eEEEE---cchhh-CCCCCCccEEEEccHHHhCCCH------------------------------------HHHHHHHH
Confidence 2 333 35533 3388999999999999997641 23455677
Q ss_pred HHHHHhccCceEEEEeecC
Q 017747 208 SRSEELVVGGRMVLILLGR 226 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~g~ 226 (366)
.-.+-|+|||+++++....
T Consensus 139 ~~~~~L~pgG~l~~~~~~~ 157 (216)
T 3ofk_A 139 NMVKMLAPGGHLVFGSARD 157 (216)
T ss_dssp HHHHTEEEEEEEEEEEECH
T ss_pred HHHHHcCCCCEEEEEecCC
Confidence 8889999999999987644
|
| >4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A* | Back alignment and structure |
|---|
Probab=98.58 E-value=5.1e-08 Score=96.42 Aligned_cols=147 Identities=14% Similarity=0.147 Sum_probs=91.1
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+.. +.++ ..+++..|+..+.....-+. +.......
T Consensus 107 ~~~~VLDiGcG~G~~~~~--------l~~~----------g~~v~gvD~s~~~~~~a~~~------------~~~~~~~~ 156 (416)
T 4e2x_A 107 PDPFIVEIGCNDGIMLRT--------IQEA----------GVRHLGFEPSSGVAAKAREK------------GIRVRTDF 156 (416)
T ss_dssp SSCEEEEETCTTTTTHHH--------HHHT----------TCEEEEECCCHHHHHHHHTT------------TCCEECSC
T ss_pred CCCEEEEecCCCCHHHHH--------HHHc----------CCcEEEECCCHHHHHHHHHc------------CCCcceee
Confidence 457999999999998764 2221 15889999875433222111 11000000
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
|.. ++...-.++++++|+++|+.++||+.+ ...||+.-
T Consensus 157 ~~~---~~~~~l~~~~~~fD~I~~~~vl~h~~d---------------------------------------~~~~l~~~ 194 (416)
T 4e2x_A 157 FEK---ATADDVRRTEGPANVIYAANTLCHIPY---------------------------------------VQSVLEGV 194 (416)
T ss_dssp CSH---HHHHHHHHHHCCEEEEEEESCGGGCTT---------------------------------------HHHHHHHH
T ss_pred ech---hhHhhcccCCCCEEEEEECChHHhcCC---------------------------------------HHHHHHHH
Confidence 111 111111257899999999999999743 23456777
Q ss_pred HHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhccc-CccccCCCHHHHHHHHhhcCceEE
Q 017747 210 SEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAY-HAHFYAPSKEEIEGEVGREGSFKL 288 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f-~~P~y~ps~eEv~~~i~~~gsf~i 288 (366)
.+-|+|||+|++......+ .+ . . ..++.+ .-...+++.+++..++++.| |++
T Consensus 195 ~r~LkpgG~l~i~~~~~~~-------------~~----~----~-----~~~~~~~~~~~~~~s~~~l~~ll~~aG-f~~ 247 (416)
T 4e2x_A 195 DALLAPDGVFVFEDPYLGD-------------IV----A----K-----TSFDQIFDEHFFLFSATSVQGMAQRCG-FEL 247 (416)
T ss_dssp HHHEEEEEEEEEEEECHHH-------------HH----H----H-----TCGGGCSTTCCEECCHHHHHHHHHHTT-EEE
T ss_pred HHHcCCCeEEEEEeCChHH-------------hh----h----h-----cchhhhhhhhhhcCCHHHHHHHHHHcC-CEE
Confidence 8999999999998643311 11 0 1 111222 23445689999999999999 999
Q ss_pred eeEEEEe
Q 017747 289 DQLDMFQ 295 (366)
Q Consensus 289 ~~~e~~~ 295 (366)
.+++.+.
T Consensus 248 ~~~~~~~ 254 (416)
T 4e2x_A 248 VDVQRLP 254 (416)
T ss_dssp EEEEEEC
T ss_pred EEEEEcc
Confidence 8777653
|
| >2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=98.58 E-value=3.1e-07 Score=87.61 Aligned_cols=158 Identities=17% Similarity=0.175 Sum_probs=94.3
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
....+|+|+|||+|..+.. +.+. .|..+++..|++ ......-+.+. . .+. ..+
T Consensus 164 ~~~~~vlDvG~G~G~~~~~--------l~~~--------~p~~~~~~~D~~-~~~~~a~~~~~-------~-~~~--~~~ 216 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIA--------VAQH--------NPNAEIFGVDWA-SVLEVAKENAR-------I-QGV--ASR 216 (335)
T ss_dssp CCCSEEEEETCTTCHHHHH--------HHHH--------CTTCEEEEEECH-HHHHHHHHHHH-------H-HTC--GGG
T ss_pred CCCCEEEEECCCcCHHHHH--------HHHH--------CCCCeEEEEecH-HHHHHHHHHHH-------h-cCC--Ccc
Confidence 3468999999999988764 3232 244799999997 43332222111 0 111 112
Q ss_pred eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
+ ..+.+++.+.-+|.+ +|++++++.+|..++ .+...+|+.
T Consensus 217 v--~~~~~d~~~~~~~~~-~D~v~~~~~l~~~~~-------------------------------------~~~~~~l~~ 256 (335)
T 2r3s_A 217 Y--HTIAGSAFEVDYGND-YDLVLLPNFLHHFDV-------------------------------------ATCEQLLRK 256 (335)
T ss_dssp E--EEEESCTTTSCCCSC-EEEEEEESCGGGSCH-------------------------------------HHHHHHHHH
T ss_pred e--EEEecccccCCCCCC-CcEEEEcchhccCCH-------------------------------------HHHHHHHHH
Confidence 2 123357765445554 999999999987522 234566778
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEE
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKL 288 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i 288 (366)
-.+-|+|||++++.-...++.. .. ..+..+...+ -+... .....++.+|+++.+++.| |++
T Consensus 257 ~~~~L~pgG~l~i~e~~~~~~~-~~----~~~~~~~~~~-~~~~~------------~~~~~~t~~~~~~ll~~aG-f~~ 317 (335)
T 2r3s_A 257 IKTALAVEGKVIVFDFIPNSDR-IT----PPDAAAFSLV-MLATT------------PNGDAYTFAEYESMFSNAG-FSH 317 (335)
T ss_dssp HHHHEEEEEEEEEEECCCCTTS-SC----SHHHHHHHHH-HHHHS------------SSCCCCCHHHHHHHHHHTT-CSE
T ss_pred HHHhCCCCcEEEEEeecCCCCc-CC----chHHHHHHHH-HHeeC------------CCCCcCCHHHHHHHHHHCC-CCe
Confidence 8899999999998876554321 10 0111111111 11111 0124579999999999999 887
Q ss_pred eeEE
Q 017747 289 DQLD 292 (366)
Q Consensus 289 ~~~e 292 (366)
.+..
T Consensus 318 ~~~~ 321 (335)
T 2r3s_A 318 SQLH 321 (335)
T ss_dssp EEEE
T ss_pred eeEE
Confidence 6553
|
| >1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A* | Back alignment and structure |
|---|
Probab=98.55 E-value=5.1e-07 Score=87.57 Aligned_cols=159 Identities=13% Similarity=0.150 Sum_probs=95.3
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
....+|+|+|||+|..+.. +.++ .|..+++..|+ .......-+.+ .. .+. .++
T Consensus 189 ~~~~~vLDvG~G~G~~~~~--------l~~~--------~p~~~~~~~D~-~~~~~~a~~~~-------~~-~~~--~~~ 241 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAA--------MLKH--------FPELDSTILNL-PGAIDLVNENA-------AE-KGV--ADR 241 (359)
T ss_dssp TTCCEEEEESCTTCHHHHH--------HHHH--------CTTCEEEEEEC-GGGHHHHHHHH-------HH-TTC--TTT
T ss_pred CCCCEEEEECCcccHHHHH--------HHHH--------CCCCeEEEEec-HHHHHHHHHHH-------Hh-cCC--CCC
Confidence 3568999999999998875 3332 24578999999 43322222111 11 111 112
Q ss_pred eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
+ ..+.+++.+..+|+. |+++++..+|.+++ .+...+|+.
T Consensus 242 v--~~~~~d~~~~~~~~~--D~v~~~~vlh~~~d-------------------------------------~~~~~~l~~ 280 (359)
T 1x19_A 242 M--RGIAVDIYKESYPEA--DAVLFCRILYSANE-------------------------------------QLSTIMCKK 280 (359)
T ss_dssp E--EEEECCTTTSCCCCC--SEEEEESCGGGSCH-------------------------------------HHHHHHHHH
T ss_pred E--EEEeCccccCCCCCC--CEEEEechhccCCH-------------------------------------HHHHHHHHH
Confidence 3 123468876656655 99999999985322 234567788
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEE
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKL 288 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i 288 (366)
-.+-|+|||++++.-...++.. .. .+..+ + .|... ...-.....+++.+|+++++++.| |++
T Consensus 281 ~~~~L~pgG~l~i~e~~~~~~~---~~---~~~~~---~-~~~~~-------~~~g~~~~~~~t~~e~~~ll~~aG-f~~ 342 (359)
T 1x19_A 281 AFDAMRSGGRLLILDMVIDDPE---NP---NFDYL---S-HYILG-------AGMPFSVLGFKEQARYKEILESLG-YKD 342 (359)
T ss_dssp HHTTCCTTCEEEEEEECCCCTT---SC---CHHHH---H-HHGGG-------GGSSCCCCCCCCGGGHHHHHHHHT-CEE
T ss_pred HHHhcCCCCEEEEEecccCCCC---Cc---hHHHH---H-HHHHh-------cCCCCcccCCCCHHHHHHHHHHCC-Cce
Confidence 8999999999988766554321 00 11111 1 23211 000112334699999999999999 988
Q ss_pred eeEEE
Q 017747 289 DQLDM 293 (366)
Q Consensus 289 ~~~e~ 293 (366)
.+...
T Consensus 343 v~~~~ 347 (359)
T 1x19_A 343 VTMVR 347 (359)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 66554
|
| >1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A* | Back alignment and structure |
|---|
Probab=98.54 E-value=1.3e-06 Score=85.21 Aligned_cols=149 Identities=17% Similarity=0.102 Sum_probs=91.0
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+...+|+|+|||+|..+.. +.++ .|..+++.-|+|. .-...+. .++
T Consensus 208 ~~~~~vLDvG~G~G~~~~~--------l~~~--------~~~~~~~~~D~~~--~~~~a~~----------------~~~ 253 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLEL--------IISK--------YPLIKGINFDLPQ--VIENAPP----------------LSG 253 (372)
T ss_dssp TTCSEEEEETCTTSHHHHH--------HHHH--------CTTCEEEEEECHH--HHTTCCC----------------CTT
T ss_pred CCCCEEEEeCCCCcHHHHH--------HHHH--------CCCCeEEEeChHH--HHHhhhh----------------cCC
Confidence 3468999999999999874 3332 2457888889842 1111110 112
Q ss_pred eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
+..+.++|++ -+|. +|++++++++|++++ .+...+|+.
T Consensus 254 --v~~~~~d~~~-~~~~--~D~v~~~~~lh~~~d-------------------------------------~~~~~~l~~ 291 (372)
T 1fp1_D 254 --IEHVGGDMFA-SVPQ--GDAMILKAVCHNWSD-------------------------------------EKCIEFLSN 291 (372)
T ss_dssp --EEEEECCTTT-CCCC--EEEEEEESSGGGSCH-------------------------------------HHHHHHHHH
T ss_pred --CEEEeCCccc-CCCC--CCEEEEecccccCCH-------------------------------------HHHHHHHHH
Confidence 2234468877 4565 899999999997543 123456788
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHH---HHcCccchhhhcccCccccCCCHHHHHHHHhhcCc
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAIL---VSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGS 285 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~m---v~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gs 285 (366)
-.+-|+|||++++.-...++... . . ..+. ...+.++ +..| -..++.+|+++++++.|
T Consensus 292 ~~~~L~pgG~l~i~e~~~~~~~~--~--~-~~~~-~~~~~d~~~~~~~~-------------~~~~t~~e~~~ll~~aG- 351 (372)
T 1fp1_D 292 CHKALSPNGKVIIVEFILPEEPN--T--S-EESK-LVSTLDNLMFITVG-------------GRERTEKQYEKLSKLSG- 351 (372)
T ss_dssp HHHHEEEEEEEEEEEEEECSSCC--S--S-HHHH-HHHHHHHHHHHHHS-------------CCCEEHHHHHHHHHHTT-
T ss_pred HHHhcCCCCEEEEEEeccCCCCc--c--c-hHHH-HHHHhhHHHHhccC-------------CccCCHHHHHHHHHHCC-
Confidence 89999999999998554433210 0 0 1110 0111111 1111 12359999999999999
Q ss_pred eEEeeEEE
Q 017747 286 FKLDQLDM 293 (366)
Q Consensus 286 f~i~~~e~ 293 (366)
|++.+...
T Consensus 352 f~~~~~~~ 359 (372)
T 1fp1_D 352 FSKFQVAC 359 (372)
T ss_dssp CSEEEEEE
T ss_pred CceEEEEE
Confidence 88765544
|
| >2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41 | Back alignment and structure |
|---|
Probab=98.54 E-value=7.9e-08 Score=88.82 Aligned_cols=156 Identities=13% Similarity=0.182 Sum_probs=90.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+ .+. ..+++..|+........- ... . ..
T Consensus 54 ~~~~vLDiGcG~G~~~~~l--------~~~----------~~~v~gvD~s~~~l~~a~-----------~~~----~-~~ 99 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFL--------QER----------GFEVVLVDPSKEMLEVAR-----------EKG----V-KN 99 (260)
T ss_dssp SCCEEEEETCTTCHHHHHH--------HTT----------TCEEEEEESCHHHHHHHH-----------HHT----C-SC
T ss_pred CCCeEEEeCCCcCHHHHHH--------HHc----------CCeEEEEeCCHHHHHHHH-----------hhc----C-CC
Confidence 5689999999999988642 111 267888998643222111 110 1 12
Q ss_pred EEeccCCCcccccCCCCcccEEEccc-ccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSN-SLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~-alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
+.. +++.+-.+|++++|+++++. .+||..+ | ..+|+.
T Consensus 100 ~~~---~d~~~~~~~~~~fD~v~~~~~~~~~~~~-~--------------------------------------~~~l~~ 137 (260)
T 2avn_A 100 VVE---AKAEDLPFPSGAFEAVLALGDVLSYVEN-K--------------------------------------DKAFSE 137 (260)
T ss_dssp EEE---CCTTSCCSCTTCEEEEEECSSHHHHCSC-H--------------------------------------HHHHHH
T ss_pred EEE---CcHHHCCCCCCCEEEEEEcchhhhcccc-H--------------------------------------HHHHHH
Confidence 333 35544447889999999976 5677443 1 234566
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHH----HHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcC
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLS----RSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREG 284 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~----~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~g 284 (366)
-.+-|+|||++++...+.... +.+.+. ..+......|...... ..+.++.++.+++|+.+. .|
T Consensus 138 ~~~~LkpgG~l~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l---aG 204 (260)
T 2avn_A 138 IRRVLVPDGLLIATVDNFYTF---------LQQMIEKDAWDQITRFLKTQTTSVGT-TLFSFNSYAFKPEDLDSL---EG 204 (260)
T ss_dssp HHHHEEEEEEEEEEEEBHHHH---------HHHHHHTTCHHHHHHHHHHCEEEEEC-SSEEEEEECBCGGGGSSC---TT
T ss_pred HHHHcCCCeEEEEEeCChHHH---------HHHhhcchhHHHHHHHHhccccccCC-CceeEEEeccCHHHHHHh---cC
Confidence 688999999999998765321 111000 1112223344322110 011123347899999888 88
Q ss_pred ceEEeeEEEEe
Q 017747 285 SFKLDQLDMFQ 295 (366)
Q Consensus 285 sf~i~~~e~~~ 295 (366)
|++.+.....
T Consensus 205 -f~~~~~~~~~ 214 (260)
T 2avn_A 205 -FETVDIRGIG 214 (260)
T ss_dssp -EEEEEEEEEC
T ss_pred -ceEEEEECCC
Confidence 9887666543
|
| >1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A* | Back alignment and structure |
|---|
Probab=98.54 E-value=4.8e-07 Score=87.86 Aligned_cols=158 Identities=20% Similarity=0.219 Sum_probs=91.9
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
....+|+|+|||+|..+.. +.+. .|..+++..|+ .......-+.+ .. .+. ..+
T Consensus 181 ~~~~~vlDvG~G~G~~~~~--------l~~~--------~~~~~~~~~D~-~~~~~~a~~~~-------~~-~~~--~~~ 233 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAA--------IALR--------APHLRGTLVEL-AGPAERARRRF-------AD-AGL--ADR 233 (374)
T ss_dssp TTCCEEEEETCTTSHHHHH--------HHHH--------CTTCEEEEEEC-HHHHHHHHHHH-------HH-TTC--TTT
T ss_pred CCCCEEEEECCCcCHHHHH--------HHHH--------CCCCEEEEEeC-HHHHHHHHHHH-------Hh-cCC--CCc
Confidence 3468999999999988764 3332 24588999998 43222221111 11 111 112
Q ss_pred eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
+ ..+.+++.+ -+|.+ +|++++++.+|++++ .+...+|+.
T Consensus 234 v--~~~~~d~~~-~~~~~-~D~v~~~~vl~~~~~-------------------------------------~~~~~~l~~ 272 (374)
T 1qzz_A 234 V--TVAEGDFFK-PLPVT-ADVVLLSFVLLNWSD-------------------------------------EDALTILRG 272 (374)
T ss_dssp E--EEEECCTTS-CCSCC-EEEEEEESCGGGSCH-------------------------------------HHHHHHHHH
T ss_pred e--EEEeCCCCC-cCCCC-CCEEEEeccccCCCH-------------------------------------HHHHHHHHH
Confidence 2 123357765 34554 999999999987432 123456777
Q ss_pred HHHHhccCceEEEEee--cCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCce
Q 017747 209 RSEELVVGGRMVLILL--GRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSF 286 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~--g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf 286 (366)
-.+-|+|||++++.-. ..++.. ...+..+...+. ++..| -..++.+|+++++++.| |
T Consensus 273 ~~~~L~pgG~l~i~e~~~~~~~~~------~~~~~~~~~~~~-~~~~~-------------~~~~~~~~~~~ll~~aG-f 331 (374)
T 1qzz_A 273 CVRALEPGGRLLVLDRADVEGDGA------DRFFSTLLDLRM-LTFMG-------------GRVRTRDEVVDLAGSAG-L 331 (374)
T ss_dssp HHHHEEEEEEEEEEECCH-------------HHHHHHHHHHH-HHHHS-------------CCCCCHHHHHHHHHTTT-E
T ss_pred HHHhcCCCcEEEEEechhhcCCCC------CcchhhhcchHH-HHhCC-------------CcCCCHHHHHHHHHHCC-C
Confidence 7899999999998765 322210 011111111111 11111 24579999999999999 9
Q ss_pred EEeeEEEEe
Q 017747 287 KLDQLDMFQ 295 (366)
Q Consensus 287 ~i~~~e~~~ 295 (366)
++.++....
T Consensus 332 ~~~~~~~~~ 340 (374)
T 1qzz_A 332 ALASERTSG 340 (374)
T ss_dssp EEEEEEEEC
T ss_pred ceEEEEECC
Confidence 987766543
|
| >3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=98.51 E-value=3.4e-07 Score=83.36 Aligned_cols=157 Identities=16% Similarity=-0.002 Sum_probs=88.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|.++..+ .+. + .+|+..|+.........+..+ . .+--
T Consensus 56 ~~~~vLD~GcG~G~~~~~l--------a~~-----~-----~~v~gvD~s~~~~~~a~~~~~-----------~--~~~~ 104 (245)
T 3ggd_A 56 PELPLIDFACGNGTQTKFL--------SQF-----F-----PRVIGLDVSKSALEIAAKENT-----------A--ANIS 104 (245)
T ss_dssp TTSCEEEETCTTSHHHHHH--------HHH-----S-----SCEEEEESCHHHHHHHHHHSC-----------C--TTEE
T ss_pred CCCeEEEEcCCCCHHHHHH--------HHh-----C-----CCEEEEECCHHHHHHHHHhCc-----------c--cCce
Confidence 4578999999999998753 222 1 278888886543332222221 0 1122
Q ss_pred EEeccCCCcccccCC-----CCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFP-----NNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTL 204 (366)
Q Consensus 130 f~~~vpgSFy~~lfp-----~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~ 204 (366)
|+.+ ++.+-.++ ..++|+++++.++||++. .|...
T Consensus 105 ~~~~---d~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~-------------------------------------~~~~~ 144 (245)
T 3ggd_A 105 YRLL---DGLVPEQAAQIHSEIGDANIYMRTGFHHIPV-------------------------------------EKREL 144 (245)
T ss_dssp EEEC---CTTCHHHHHHHHHHHCSCEEEEESSSTTSCG-------------------------------------GGHHH
T ss_pred EEEC---cccccccccccccccCccEEEEcchhhcCCH-------------------------------------HHHHH
Confidence 4443 44332121 134899999999999742 12345
Q ss_pred HHHHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccch--hhhcccCccccCCCHHHHHHHHhh
Q 017747 205 FLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEK--EKLVAYHAHFYAPSKEEIEGEVGR 282 (366)
Q Consensus 205 FL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~--e~~d~f~~P~y~ps~eEv~~~i~~ 282 (366)
+|+.-.+-|+|||++++.-++..+. ..+..+... ..|.-.. ..+.....|. ..+.+|+.+.+
T Consensus 145 ~l~~~~~~LkpgG~l~i~~~~~~~~--------~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-- 208 (245)
T 3ggd_A 145 LGQSLRILLGKQGAMYLIELGTGCI--------DFFNSLLEK-----YGQLPYELLLVMEHGIRPG-IFTAEDIELYF-- 208 (245)
T ss_dssp HHHHHHHHHTTTCEEEEEEECTTHH--------HHHHHHHHH-----HSSCCHHHHHHHTTTCCCC-CCCHHHHHHHC--
T ss_pred HHHHHHHHcCCCCEEEEEeCCcccc--------HHHHHHHhC-----CCCCchhhhhccccCCCCC-ccCHHHHHHHh--
Confidence 6677789999999999887765431 111111111 0111000 0111122343 36899999999
Q ss_pred cCceEEeeEEEE
Q 017747 283 EGSFKLDQLDMF 294 (366)
Q Consensus 283 ~gsf~i~~~e~~ 294 (366)
.| |++......
T Consensus 209 aG-f~~~~~~~~ 219 (245)
T 3ggd_A 209 PD-FEILSQGEG 219 (245)
T ss_dssp TT-EEEEEEECC
T ss_pred CC-CEEEecccc
Confidence 78 998665543
|
| >2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.50 E-value=1.3e-06 Score=77.80 Aligned_cols=111 Identities=19% Similarity=0.167 Sum_probs=77.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+ . .+++..|+.... + -
T Consensus 67 ~~~~vLDiG~G~G~~~~~l--------------------~-~~v~~~D~s~~~-------~------------------~ 100 (215)
T 2zfu_A 67 ASLVVADFGCGDCRLASSI--------------------R-NPVHCFDLASLD-------P------------------R 100 (215)
T ss_dssp TTSCEEEETCTTCHHHHHC--------------------C-SCEEEEESSCSS-------T------------------T
T ss_pred CCCeEEEECCcCCHHHHHh--------------------h-ccEEEEeCCCCC-------c------------------e
Confidence 4579999999999987531 1 567778876540 0 0
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
+.. +++.+-.+|++++|+++++.++|| .+ ...+|+.-
T Consensus 101 ~~~---~d~~~~~~~~~~fD~v~~~~~l~~-~~---------------------------------------~~~~l~~~ 137 (215)
T 2zfu_A 101 VTV---CDMAQVPLEDESVDVAVFCLSLMG-TN---------------------------------------IRDFLEEA 137 (215)
T ss_dssp EEE---SCTTSCSCCTTCEEEEEEESCCCS-SC---------------------------------------HHHHHHHH
T ss_pred EEE---eccccCCCCCCCEeEEEEehhccc-cC---------------------------------------HHHHHHHH
Confidence 111 244443478899999999999996 21 12345566
Q ss_pred HHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEe
Q 017747 210 SEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLD 289 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~ 289 (366)
.+-|+|||+++++.... .+++.+++.+.+++.| |++.
T Consensus 138 ~~~L~~gG~l~i~~~~~------------------------------------------~~~~~~~~~~~l~~~G-f~~~ 174 (215)
T 2zfu_A 138 NRVLKPGGLLKVAEVSS------------------------------------------RFEDVRTFLRAVTKLG-FKIV 174 (215)
T ss_dssp HHHEEEEEEEEEEECGG------------------------------------------GCSCHHHHHHHHHHTT-EEEE
T ss_pred HHhCCCCeEEEEEEcCC------------------------------------------CCCCHHHHHHHHHHCC-CEEE
Confidence 78899999999985321 0128999999999999 8886
Q ss_pred eEE
Q 017747 290 QLD 292 (366)
Q Consensus 290 ~~e 292 (366)
...
T Consensus 175 ~~~ 177 (215)
T 2zfu_A 175 SKD 177 (215)
T ss_dssp EEE
T ss_pred EEe
Confidence 644
|
| >1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A* | Back alignment and structure |
|---|
Probab=98.49 E-value=1.1e-06 Score=84.92 Aligned_cols=157 Identities=18% Similarity=0.169 Sum_probs=93.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
+..+|+|+|||+|..+.. +.+. .|..+++..|+ .......-+.+. . .+. ..++
T Consensus 183 ~~~~vLDvG~G~G~~~~~--------l~~~--------~~~~~~~~~D~-~~~~~~a~~~~~-------~-~~~--~~~v 235 (360)
T 1tw3_A 183 NVRHVLDVGGGKGGFAAA--------IARR--------APHVSATVLEM-AGTVDTARSYLK-------D-EGL--SDRV 235 (360)
T ss_dssp TCSEEEEETCTTSHHHHH--------HHHH--------CTTCEEEEEEC-TTHHHHHHHHHH-------H-TTC--TTTE
T ss_pred cCcEEEEeCCcCcHHHHH--------HHHh--------CCCCEEEEecC-HHHHHHHHHHHH-------h-cCC--CCce
Confidence 457999999999998864 3232 24488999998 433222221111 1 111 1122
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
..+.+++.+ -+|.+ +|+++++..+|.+++ .+...+|+.-
T Consensus 236 --~~~~~d~~~-~~~~~-~D~v~~~~vl~~~~~-------------------------------------~~~~~~l~~~ 274 (360)
T 1tw3_A 236 --DVVEGDFFE-PLPRK-ADAIILSFVLLNWPD-------------------------------------HDAVRILTRC 274 (360)
T ss_dssp --EEEECCTTS-CCSSC-EEEEEEESCGGGSCH-------------------------------------HHHHHHHHHH
T ss_pred --EEEeCCCCC-CCCCC-ccEEEEcccccCCCH-------------------------------------HHHHHHHHHH
Confidence 123357765 34554 999999999986421 1234567777
Q ss_pred HHHhccCceEEEEeec-CCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEE
Q 017747 210 SEELVVGGRMVLILLG-RIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKL 288 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g-~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i 288 (366)
.+-|+|||++++.-.. .++.. . ..+..+...+ -++..| ...++.+|+++++++.| |++
T Consensus 275 ~~~L~pgG~l~i~e~~~~~~~~----~--~~~~~~~~~~-~~~~~~-------------~~~~t~~e~~~ll~~aG-f~~ 333 (360)
T 1tw3_A 275 AEALEPGGRILIHERDDLHENS----F--NEQFTELDLR-MLVFLG-------------GALRTREKWDGLAASAG-LVV 333 (360)
T ss_dssp HHTEEEEEEEEEEECCBCGGGC----C--SHHHHHHHHH-HHHHHS-------------CCCCBHHHHHHHHHHTT-EEE
T ss_pred HHhcCCCcEEEEEEEeccCCCC----C--cchhhhccHH-HhhhcC-------------CcCCCHHHHHHHHHHCC-CeE
Confidence 8999999999988655 32211 0 0111111111 111111 24579999999999999 998
Q ss_pred eeEEEEe
Q 017747 289 DQLDMFQ 295 (366)
Q Consensus 289 ~~~e~~~ 295 (366)
.+.....
T Consensus 334 ~~~~~~~ 340 (360)
T 1tw3_A 334 EEVRQLP 340 (360)
T ss_dssp EEEEEEE
T ss_pred EEEEeCC
Confidence 7776554
|
| >3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A* | Back alignment and structure |
|---|
Probab=98.49 E-value=1.9e-07 Score=87.41 Aligned_cols=117 Identities=14% Similarity=0.144 Sum_probs=74.4
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+ .+. ..+|+..|+.......+.+........... ..-.
T Consensus 57 ~~~~vLDiGcG~G~~~~~l--------~~~----------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~------~~~~ 112 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIML--------VEE----------GFSVTSVDASDKMLKYALKERWNRRKEPAF------DKWV 112 (293)
T ss_dssp TCCEEEETTCTTSHHHHHH--------HHT----------TCEEEEEESCHHHHHHHHHHHHHTTTSHHH------HTCE
T ss_pred CCCEEEEecCCCCHHHHHH--------HHC----------CCeEEEEECCHHHHHHHHHhhhhccccccc------ceee
Confidence 4579999999999988642 221 158999999764433332221000000000 0112
Q ss_pred EEeccCCCccccc---CCCCcccEEEcc-cccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRL---FPNNSLHFIHSS-NSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLF 205 (366)
Q Consensus 130 f~~~vpgSFy~~l---fp~~s~~~~~S~-~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~F 205 (366)
+.. +++..-. ++++++|+++++ .++|++...... .+++..+
T Consensus 113 ~~~---~d~~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~--------------------------------~~~~~~~ 157 (293)
T 3thr_A 113 IEE---ANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGD--------------------------------QSEHRLA 157 (293)
T ss_dssp EEE---CCGGGHHHHSCCTTCEEEEEECTTCGGGSCCSSSS--------------------------------SHHHHHH
T ss_pred Eee---cChhhCccccccCCCeEEEEEcChHHhhcCccccC--------------------------------HHHHHHH
Confidence 223 3444333 789999999999 899998764322 1356678
Q ss_pred HHHHHHHhccCceEEEEeec
Q 017747 206 LRSRSEELVVGGRMVLILLG 225 (366)
Q Consensus 206 L~~Ra~EL~~GG~lvl~~~g 225 (366)
|+.-++-|+|||+|++....
T Consensus 158 l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 158 LKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp HHHHHHTEEEEEEEEEEEEC
T ss_pred HHHHHHHcCCCeEEEEEeCC
Confidence 88889999999999999764
|
| >3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A | Back alignment and structure |
|---|
Probab=98.48 E-value=6.5e-07 Score=83.89 Aligned_cols=106 Identities=14% Similarity=0.149 Sum_probs=68.0
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCC-cceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCC
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAP-EFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSP 127 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p-~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~ 127 (366)
.++.+|+|+|||+|..+..+ .+ ..| ..+++..|+.......+-+... . . ..
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l--------~~--------~~~~~~~v~gvD~s~~~~~~a~~~~~--------~--~--~~ 72 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVL--------MP--------LLPEGSKYTGIDSGETLLAEARELFR--------L--L--PY 72 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHH--------TT--------TSCTTCEEEEEESCHHHHHHHHHHHH--------S--S--SS
T ss_pred CCCCeEEEecCCCCHHHHHH--------HH--------hCCCCCEEEEEECCHHHHHHHHHHHH--------h--c--CC
Confidence 45789999999999988642 11 123 3789999986532222211111 0 0 11
Q ss_pred ce-EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 128 SV-YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 128 ~~-f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
++ |.. +++.+-.+ ++++|++++..++|++.+. ..+|
T Consensus 73 ~v~~~~---~d~~~~~~-~~~fD~v~~~~~l~~~~~~---------------------------------------~~~l 109 (284)
T 3gu3_A 73 DSEFLE---GDATEIEL-NDKYDIAICHAFLLHMTTP---------------------------------------ETML 109 (284)
T ss_dssp EEEEEE---SCTTTCCC-SSCEEEEEEESCGGGCSSH---------------------------------------HHHH
T ss_pred ceEEEE---cchhhcCc-CCCeeEEEECChhhcCCCH---------------------------------------HHHH
Confidence 22 333 45654334 5799999999999997442 2345
Q ss_pred HHHHHHhccCceEEEEeec
Q 017747 207 RSRSEELVVGGRMVLILLG 225 (366)
Q Consensus 207 ~~Ra~EL~~GG~lvl~~~g 225 (366)
+.-.+-|+|||++++..+.
T Consensus 110 ~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 110 QKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp HHHHHTEEEEEEEEEEECC
T ss_pred HHHHHHcCCCCEEEEEecc
Confidence 5667899999999998765
|
| >3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=98.47 E-value=1.3e-06 Score=74.86 Aligned_cols=132 Identities=18% Similarity=0.193 Sum_probs=85.1
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
....+|+|+|||+|..+.. +.+. . .+++..|+.......+-+. . .+-
T Consensus 16 ~~~~~vLDiG~G~G~~~~~--------l~~~--------~--~~v~~vD~s~~~~~~a~~~-----------~----~~v 62 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKY--------LLEF--------A--TKLYCIDINVIALKEVKEK-----------F----DSV 62 (170)
T ss_dssp SCCEEEEEETCTTCTTHHH--------HHTT--------E--EEEEEECSCHHHHHHHHHH-----------C----TTS
T ss_pred CCCCeEEEECCCCCHHHHH--------HHhh--------c--CeEEEEeCCHHHHHHHHHh-----------C----CCc
Confidence 3467999999999999864 2221 1 3788888864322222111 0 112
Q ss_pred eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
.|..+ + .-++++++|+++++.++|++.+. ..+|+.
T Consensus 63 ~~~~~---d---~~~~~~~~D~v~~~~~l~~~~~~---------------------------------------~~~l~~ 97 (170)
T 3i9f_A 63 ITLSD---P---KEIPDNSVDFILFANSFHDMDDK---------------------------------------QHVISE 97 (170)
T ss_dssp EEESS---G---GGSCTTCEEEEEEESCSTTCSCH---------------------------------------HHHHHH
T ss_pred EEEeC---C---CCCCCCceEEEEEccchhcccCH---------------------------------------HHHHHH
Confidence 23332 3 34788999999999999997431 234566
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEE
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKL 288 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i 288 (366)
-.+-|+|||++++......+.... .......+.+++++.++ | |++
T Consensus 98 ~~~~L~pgG~l~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~~~~~l~--G-f~~ 142 (170)
T 3i9f_A 98 VKRILKDDGRVIIIDWRKENTGIG--------------------------------PPLSIRMDEKDYMGWFS--N-FVV 142 (170)
T ss_dssp HHHHEEEEEEEEEEEECSSCCSSS--------------------------------SCGGGCCCHHHHHHHTT--T-EEE
T ss_pred HHHhcCCCCEEEEEEcCccccccC--------------------------------chHhhhcCHHHHHHHHh--C-cEE
Confidence 688999999999997765432100 00113368999999999 7 988
Q ss_pred eeEEE
Q 017747 289 DQLDM 293 (366)
Q Consensus 289 ~~~e~ 293 (366)
.+...
T Consensus 143 ~~~~~ 147 (170)
T 3i9f_A 143 EKRFN 147 (170)
T ss_dssp EEEEC
T ss_pred EEccC
Confidence 66554
|
| >3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.46 E-value=2.6e-07 Score=87.35 Aligned_cols=48 Identities=17% Similarity=0.189 Sum_probs=37.6
Q ss_pred CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEEE
Q 017747 143 FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLI 222 (366)
Q Consensus 143 fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~lvl~ 222 (366)
++++++|++++...+||+.- ..-..+...+|+.-++-|+|||+|++.
T Consensus 173 ~~~~~fD~I~~~~vl~~ihl---------------------------------~~~~~~~~~~l~~~~~~LkpGG~lil~ 219 (292)
T 3g07_A 173 AQTPEYDVVLCLSLTKWVHL---------------------------------NWGDEGLKRMFRRIYRHLRPGGILVLE 219 (292)
T ss_dssp TCCCCEEEEEEESCHHHHHH---------------------------------HHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccCCCcCEEEEChHHHHhhh---------------------------------cCCHHHHHHHHHHHHHHhCCCcEEEEe
Confidence 57889999999999999631 001246677888899999999999996
Q ss_pred e
Q 017747 223 L 223 (366)
Q Consensus 223 ~ 223 (366)
.
T Consensus 220 ~ 220 (292)
T 3g07_A 220 P 220 (292)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A* | Back alignment and structure |
|---|
Probab=98.44 E-value=6.4e-07 Score=78.28 Aligned_cols=140 Identities=14% Similarity=0.124 Sum_probs=85.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc-
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS- 128 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~- 128 (366)
+..+|+|+|||+|..+..+ .+. ..+++..|+.......+-+.. .. .+ .++
T Consensus 32 ~~~~vLdiG~G~G~~~~~l--------~~~----------~~~v~~vD~s~~~~~~a~~~~-------~~-~~---~~~~ 82 (199)
T 2xvm_A 32 KPGKTLDLGCGNGRNSLYL--------AAN----------GYDVDAWDKNAMSIANVERIK-------SI-EN---LDNL 82 (199)
T ss_dssp CSCEEEEETCTTSHHHHHH--------HHT----------TCEEEEEESCHHHHHHHHHHH-------HH-HT---CTTE
T ss_pred CCCeEEEEcCCCCHHHHHH--------HHC----------CCeEEEEECCHHHHHHHHHHH-------Hh-CC---CCCc
Confidence 3569999999999988642 221 268888998653322221111 11 11 112
Q ss_pred eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
.+.. +++.+-.+ ++++|+++++.++||++. .|...+|+.
T Consensus 83 ~~~~---~d~~~~~~-~~~~D~v~~~~~l~~~~~-------------------------------------~~~~~~l~~ 121 (199)
T 2xvm_A 83 HTRV---VDLNNLTF-DRQYDFILSTVVLMFLEA-------------------------------------KTIPGLIAN 121 (199)
T ss_dssp EEEE---CCGGGCCC-CCCEEEEEEESCGGGSCG-------------------------------------GGHHHHHHH
T ss_pred EEEE---cchhhCCC-CCCceEEEEcchhhhCCH-------------------------------------HHHHHHHHH
Confidence 2333 45544334 889999999999999642 123456777
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEE
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKL 288 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i 288 (366)
-.+-|+|||++++.........+ .+ ....+..+.+|+++.++. |++
T Consensus 122 ~~~~L~~gG~l~~~~~~~~~~~~---------------------~~----------~~~~~~~~~~~l~~~~~~---f~~ 167 (199)
T 2xvm_A 122 MQRCTKPGGYNLIVAAMDTADYP---------------------CT----------VGFPFAFKEGELRRYYEG---WER 167 (199)
T ss_dssp HHHTEEEEEEEEEEEEBCCSSSC---------------------CC----------SCCSCCBCTTHHHHHTTT---SEE
T ss_pred HHHhcCCCeEEEEEEeeccCCcC---------------------CC----------CCCCCccCHHHHHHHhcC---CeE
Confidence 78999999998876543322100 00 111245689999999975 888
Q ss_pred eeEEE
Q 017747 289 DQLDM 293 (366)
Q Consensus 289 ~~~e~ 293 (366)
.+.+.
T Consensus 168 ~~~~~ 172 (199)
T 2xvm_A 168 VKYNE 172 (199)
T ss_dssp EEEEC
T ss_pred EEecc
Confidence 77654
|
| >3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae} | Back alignment and structure |
|---|
Probab=98.43 E-value=4.4e-07 Score=84.73 Aligned_cols=139 Identities=13% Similarity=0.177 Sum_probs=86.9
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|.++.. +.+. ..+|+..|+.......+-+.+. . .+ ..-.
T Consensus 120 ~~~~vLD~GcG~G~~~~~--------l~~~----------g~~v~~vD~s~~~~~~a~~~~~-------~-~~---~~~~ 170 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLY--------LSLL----------GYDVTSWDHNENSIAFLNETKE-------K-EN---LNIS 170 (286)
T ss_dssp CSCEEEEESCTTCHHHHH--------HHHT----------TCEEEEEESCHHHHHHHHHHHH-------H-TT---CCEE
T ss_pred CCCcEEEECCCCCHHHHH--------HHHC----------CCeEEEEECCHHHHHHHHHHHH-------H-cC---CceE
Confidence 468999999999999875 2221 2688999986543332222111 1 11 1112
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
|.. +++.+-.+ ++++|+++++.++||++. | ++..+|+.-
T Consensus 171 ~~~---~d~~~~~~-~~~fD~i~~~~~~~~~~~-~------------------------------------~~~~~l~~~ 209 (286)
T 3m70_A 171 TAL---YDINAANI-QENYDFIVSTVVFMFLNR-E------------------------------------RVPSIIKNM 209 (286)
T ss_dssp EEE---CCGGGCCC-CSCEEEEEECSSGGGSCG-G------------------------------------GHHHHHHHH
T ss_pred EEE---eccccccc-cCCccEEEEccchhhCCH-H------------------------------------HHHHHHHHH
Confidence 333 45544333 889999999999999743 1 234567777
Q ss_pred HHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEe
Q 017747 210 SEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLD 289 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~ 289 (366)
.+-|+|||++++.........+. -..+.+..+.+|+++.++. |++.
T Consensus 210 ~~~LkpgG~l~i~~~~~~~~~~~-------------------------------~~~~~~~~~~~~l~~~~~~---~~~~ 255 (286)
T 3m70_A 210 KEHTNVGGYNLIVAAMSTDDVPC-------------------------------PLPFSFTFAENELKEYYKD---WEFL 255 (286)
T ss_dssp HHTEEEEEEEEEEEEBCCSSSCC-------------------------------SSCCSCCBCTTHHHHHTTT---SEEE
T ss_pred HHhcCCCcEEEEEEecCCCCCCC-------------------------------CCCccccCCHHHHHHHhcC---CEEE
Confidence 89999999988876544321100 0123466788899888864 8886
Q ss_pred eEE
Q 017747 290 QLD 292 (366)
Q Consensus 290 ~~e 292 (366)
..+
T Consensus 256 ~~~ 258 (286)
T 3m70_A 256 EYN 258 (286)
T ss_dssp EEE
T ss_pred EEE
Confidence 664
|
| >2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=98.39 E-value=5.7e-07 Score=79.47 Aligned_cols=156 Identities=13% Similarity=0.087 Sum_probs=91.5
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+...+|+|+|||+|..+... +.+ +..+++..|........+-+.+. . .+ ..-
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~-------~~~----------~~~~v~~vD~s~~~~~~a~~~~~-------~-~~---~~~ 73 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSI-------FVE----------DGYKTYGIEISDLQLKKAENFSR-------E-NN---FKL 73 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHH-------HHH----------TTCEEEEEECCHHHHHHHHHHHH-------H-HT---CCC
T ss_pred CCCCEEEEECCCCCHHHHHH-------HHh----------CCCEEEEEECCHHHHHHHHHHHH-------h-cC---Cce
Confidence 34689999999999987532 111 12689999986543332222111 1 11 111
Q ss_pred eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
.+.. +++.+-.+|++++|+++++.++|+++ . .|...+|+.
T Consensus 74 ~~~~---~d~~~~~~~~~~fD~v~~~~~l~~~~---~----------------------------------~~~~~~l~~ 113 (209)
T 2p8j_A 74 NISK---GDIRKLPFKDESMSFVYSYGTIFHMR---K----------------------------------NDVKEAIDE 113 (209)
T ss_dssp CEEE---CCTTSCCSCTTCEEEEEECSCGGGSC---H----------------------------------HHHHHHHHH
T ss_pred EEEE---CchhhCCCCCCceeEEEEcChHHhCC---H----------------------------------HHHHHHHHH
Confidence 2333 34544347889999999999999862 1 244566778
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEE
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKL 288 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i 288 (366)
-.+-|+|||++++..+...+.... .+. .+. +..... ..+.......+.+.+|+...++..| |..
T Consensus 114 ~~~~LkpgG~l~~~~~~~~~~~~~-~~~-~~~------------~~~~~~-~~~~~~~~~~~~~~~e~~~~~~~~g-~~~ 177 (209)
T 2p8j_A 114 IKRVLKPGGLACINFLTTKDERYN-KGE-KIG------------EGEFLQ-LERGEKVIHSYVSLEEADKYFKDMK-VLF 177 (209)
T ss_dssp HHHHEEEEEEEEEEEEETTSTTTT-CSE-EEE------------TTEEEE-CC-CCCEEEEEECHHHHHHTTTTSE-EEE
T ss_pred HHHHcCCCcEEEEEEecccchhcc-chh-hhc------------ccccee-ccCCCceeEEecCHHHHHHHHhhcC-cee
Confidence 889999999999999887543111 000 000 000000 0011122236778999999999887 443
|
| >1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A* | Back alignment and structure |
|---|
Probab=98.38 E-value=7.1e-06 Score=79.29 Aligned_cols=150 Identities=17% Similarity=0.168 Sum_probs=90.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+.. +.++ .|..+++.-|+|. . ...... .++
T Consensus 188 ~~~~vlDvG~G~G~~~~~--------l~~~--------~p~~~~~~~D~~~-~----~~~a~~-------------~~~- 232 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKI--------ICET--------FPKLKCIVFDRPQ-V----VENLSG-------------SNN- 232 (352)
T ss_dssp TCSEEEEETCTTSHHHHH--------HHHH--------CTTCEEEEEECHH-H----HTTCCC-------------BTT-
T ss_pred cCceEEEeCCCccHHHHH--------HHHH--------CCCCeEEEeeCHH-H----Hhhccc-------------CCC-
Confidence 457999999999998864 3332 2447899999841 1 111110 112
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
+..+.++|++ -+|+ +|++++++++|.+++ .+...+|+.-
T Consensus 233 -v~~~~~d~~~-~~p~--~D~v~~~~~lh~~~d-------------------------------------~~~~~~l~~~ 271 (352)
T 1fp2_A 233 -LTYVGGDMFT-SIPN--ADAVLLKYILHNWTD-------------------------------------KDCLRILKKC 271 (352)
T ss_dssp -EEEEECCTTT-CCCC--CSEEEEESCGGGSCH-------------------------------------HHHHHHHHHH
T ss_pred -cEEEeccccC-CCCC--ccEEEeehhhccCCH-------------------------------------HHHHHHHHHH
Confidence 2234568877 4563 999999999996432 1233567788
Q ss_pred HHHhcc---CceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCce
Q 017747 210 SEELVV---GGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSF 286 (366)
Q Consensus 210 a~EL~~---GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf 286 (366)
.+-|+| ||++++.-...++.. ....... ...+.++.- +. +. -..++.+|+++++++.| |
T Consensus 272 ~~~L~p~~~gG~l~i~e~~~~~~~----~~~~~~~--~~~~~d~~~--------~~-~~--g~~~t~~e~~~ll~~aG-f 333 (352)
T 1fp2_A 272 KEAVTNDGKRGKVTIIDMVIDKKK----DENQVTQ--IKLLMDVNM--------AC-LN--GKERNEEEWKKLFIEAG-F 333 (352)
T ss_dssp HHHHSGGGCCCEEEEEECEECTTT----SCHHHHH--HHHHHHHHG--------GG-GT--CCCEEHHHHHHHHHHTT-C
T ss_pred HHhCCCCCCCcEEEEEEeecCCCC----Cccchhh--hHhhccHHH--------Hh-cc--CCCCCHHHHHHHHHHCC-C
Confidence 899999 999998865544321 0000111 112222210 00 11 23468999999999999 8
Q ss_pred EEeeEEE
Q 017747 287 KLDQLDM 293 (366)
Q Consensus 287 ~i~~~e~ 293 (366)
++.+...
T Consensus 334 ~~~~~~~ 340 (352)
T 1fp2_A 334 QHYKISP 340 (352)
T ss_dssp CEEEEEE
T ss_pred CeeEEEe
Confidence 8765543
|
| >3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=98.38 E-value=1.2e-06 Score=78.87 Aligned_cols=106 Identities=18% Similarity=0.188 Sum_probs=67.5
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+...+|+|+|||+|..+..+ .+. + .+++..|+.......+-+.++ +-
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l--------~~~-----~-----~~v~~~D~s~~~~~~a~~~~~---------------~~ 85 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHF--------TKE-----F-----GDTAGLELSEDMLTHARKRLP---------------DA 85 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHH--------HHH-----H-----SEEEEEESCHHHHHHHHHHCT---------------TC
T ss_pred CCCCeEEEecccCCHHHHHH--------HHh-----C-----CcEEEEeCCHHHHHHHHHhCC---------------CC
Confidence 34689999999999998753 222 1 267888875432222221111 11
Q ss_pred eEEeccCCCcccccCCCCcccEEEc-ccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHS-SNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S-~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
-+.. +++.+ +-+++++|+++| ..++||+.. ..|+..+|+
T Consensus 86 ~~~~---~d~~~-~~~~~~~D~v~~~~~~~~~~~~------------------------------------~~~~~~~l~ 125 (239)
T 3bxo_A 86 TLHQ---GDMRD-FRLGRKFSAVVSMFSSVGYLKT------------------------------------TEELGAAVA 125 (239)
T ss_dssp EEEE---CCTTT-CCCSSCEEEEEECTTGGGGCCS------------------------------------HHHHHHHHH
T ss_pred EEEE---CCHHH-cccCCCCcEEEEcCchHhhcCC------------------------------------HHHHHHHHH
Confidence 2333 35533 223779999995 559999643 135566788
Q ss_pred HHHHHhccCceEEEEeecCC
Q 017747 208 SRSEELVVGGRMVLILLGRI 227 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~g~~ 227 (366)
.-.+-|+|||++++......
T Consensus 126 ~~~~~L~pgG~l~~~~~~~~ 145 (239)
T 3bxo_A 126 SFAEHLEPGGVVVVEPWWFP 145 (239)
T ss_dssp HHHHTEEEEEEEEECCCCCT
T ss_pred HHHHhcCCCeEEEEEeccCc
Confidence 88999999999999865443
|
| >1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A* | Back alignment and structure |
|---|
Probab=98.35 E-value=5e-06 Score=80.53 Aligned_cols=151 Identities=17% Similarity=0.157 Sum_probs=90.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+.. +.++ .|..+++.-|+|. .- ..... .++
T Consensus 193 ~~~~vlDvG~G~G~~~~~--------l~~~--------~p~~~~~~~D~~~--~~---~~a~~-------------~~~- 237 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKL--------IHEI--------FPHLKCTVFDQPQ--VV---GNLTG-------------NEN- 237 (358)
T ss_dssp TCSEEEEETCTTSHHHHH--------HHHH--------CTTSEEEEEECHH--HH---SSCCC-------------CSS-
T ss_pred CCCEEEEECCCcCHHHHH--------HHHH--------CCCCeEEEeccHH--HH---hhccc-------------CCC-
Confidence 357999999999998874 3332 2447888889852 11 11110 112
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
+..+.++|++ -+| ++|++++++.+|++++ .+...+|+.-
T Consensus 238 -v~~~~~d~~~-~~~--~~D~v~~~~vlh~~~d-------------------------------------~~~~~~l~~~ 276 (358)
T 1zg3_A 238 -LNFVGGDMFK-SIP--SADAVLLKWVLHDWND-------------------------------------EQSLKILKNS 276 (358)
T ss_dssp -EEEEECCTTT-CCC--CCSEEEEESCGGGSCH-------------------------------------HHHHHHHHHH
T ss_pred -cEEEeCccCC-CCC--CceEEEEcccccCCCH-------------------------------------HHHHHHHHHH
Confidence 2334578877 456 4999999999998543 1234567788
Q ss_pred HHHhcc---CceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCce
Q 017747 210 SEELVV---GGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSF 286 (366)
Q Consensus 210 a~EL~~---GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf 286 (366)
.+-|+| ||++++.-...++... .........+.. +.-|+..| -..++.+|+++++++.| |
T Consensus 277 ~~~L~p~~~gG~l~i~e~~~~~~~~--~~~~~~~~~~~d-~~~~~~~~-------------g~~~t~~e~~~ll~~aG-f 339 (358)
T 1zg3_A 277 KEAISHKGKDGKVIIIDISIDETSD--DRGLTELQLDYD-LVMLTMFL-------------GKERTKQEWEKLIYDAG-F 339 (358)
T ss_dssp HHHTGGGGGGCEEEEEECEECTTCS--CHHHHHHHHHHH-HHHHHHHS-------------CCCEEHHHHHHHHHHTT-C
T ss_pred HHhCCCCCCCcEEEEEEeccCCCCc--cchhhhHHHhhC-HHHhccCC-------------CCCCCHHHHHHHHHHcC-C
Confidence 899999 9999987554432210 000000011111 11111111 12469999999999999 8
Q ss_pred EEeeEEE
Q 017747 287 KLDQLDM 293 (366)
Q Consensus 287 ~i~~~e~ 293 (366)
++.++..
T Consensus 340 ~~~~~~~ 346 (358)
T 1zg3_A 340 SSYKITP 346 (358)
T ss_dssp CEEEEEE
T ss_pred CeeEEEe
Confidence 8766543
|
| >3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=98.34 E-value=5.6e-07 Score=82.71 Aligned_cols=149 Identities=16% Similarity=0.093 Sum_probs=82.4
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+...+|+|+|||+|..|.. +.++ .. .+|+..|+..++.....+..+... ... ..+
T Consensus 36 ~~g~~VLDiGcGtG~~t~~--------la~~--------g~-~~V~gvDis~~ml~~a~~~~~~~~-----~~~---~~~ 90 (232)
T 3opn_A 36 INGKTCLDIGSSTGGFTDV--------MLQN--------GA-KLVYALDVGTNQLAWKIRSDERVV-----VME---QFN 90 (232)
T ss_dssp CTTCEEEEETCTTSHHHHH--------HHHT--------TC-SEEEEECSSCCCCCHHHHTCTTEE-----EEC---SCC
T ss_pred CCCCEEEEEccCCCHHHHH--------HHhc--------CC-CEEEEEcCCHHHHHHHHHhCcccc-----ccc---cce
Confidence 3457999999999999864 2221 11 489999998876554322221100 000 001
Q ss_pred eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
+ ....+.++...+++..++|+++++. + .+|..
T Consensus 91 ~-~~~~~~~~~~~~~d~~~~D~v~~~l--------~---------------------------------------~~l~~ 122 (232)
T 3opn_A 91 F-RNAVLADFEQGRPSFTSIDVSFISL--------D---------------------------------------LILPP 122 (232)
T ss_dssp G-GGCCGGGCCSCCCSEEEECCSSSCG--------G---------------------------------------GTHHH
T ss_pred E-EEeCHhHcCcCCCCEEEEEEEhhhH--------H---------------------------------------HHHHH
Confidence 1 0111233433345555677666542 1 12445
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEE
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKL 288 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i 288 (366)
-.+-|+|||++++.+ .+ .++ ..+..+-..|.+... ..+..+.+++.+.+++.| |++
T Consensus 123 i~rvLkpgG~lv~~~--~p-----------~~e---~~~~~~~~~G~~~d~-------~~~~~~~~~l~~~l~~aG-f~v 178 (232)
T 3opn_A 123 LYEILEKNGEVAALI--KP-----------QFE---AGREQVGKNGIIRDP-------KVHQMTIEKVLKTATQLG-FSV 178 (232)
T ss_dssp HHHHSCTTCEEEEEE--CH-----------HHH---SCHHHHC-CCCCCCH-------HHHHHHHHHHHHHHHHHT-EEE
T ss_pred HHHhccCCCEEEEEE--Cc-----------ccc---cCHHHhCcCCeecCc-------chhHHHHHHHHHHHHHCC-CEE
Confidence 588999999999965 11 122 222222223433221 123348999999999999 998
Q ss_pred eeEEEE
Q 017747 289 DQLDMF 294 (366)
Q Consensus 289 ~~~e~~ 294 (366)
..++..
T Consensus 179 ~~~~~~ 184 (232)
T 3opn_A 179 KGLTFS 184 (232)
T ss_dssp EEEEEC
T ss_pred EEEEEc
Confidence 777643
|
| >4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=98.33 E-value=3.1e-06 Score=78.11 Aligned_cols=107 Identities=14% Similarity=0.080 Sum_probs=70.2
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc-e
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS-V 129 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~-~ 129 (366)
-.+|+|+|||+|..|..+...+ | |+-.|+.-|........+-+... . .++ .
T Consensus 78 G~~VldlG~G~G~~~~~la~~V------------G---~~G~V~avD~s~~~~~~l~~~a~-----------~--~~ni~ 129 (233)
T 4df3_A 78 GDRILYLGIASGTTASHMSDII------------G---PRGRIYGVEFAPRVMRDLLTVVR-----------D--RRNIF 129 (233)
T ss_dssp TCEEEEETCTTSHHHHHHHHHH------------C---TTCEEEEEECCHHHHHHHHHHST-----------T--CTTEE
T ss_pred CCEEEEecCcCCHHHHHHHHHh------------C---CCceEEEEeCCHHHHHHHHHhhH-----------h--hcCee
Confidence 4899999999999998643333 2 45789999986543322222111 1 223 4
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
.+.+..+....-.++.+++|++|+..+.||- -..++..-
T Consensus 130 ~V~~d~~~p~~~~~~~~~vDvVf~d~~~~~~-----------------------------------------~~~~l~~~ 168 (233)
T 4df3_A 130 PILGDARFPEKYRHLVEGVDGLYADVAQPEQ-----------------------------------------AAIVVRNA 168 (233)
T ss_dssp EEESCTTCGGGGTTTCCCEEEEEECCCCTTH-----------------------------------------HHHHHHHH
T ss_pred EEEEeccCccccccccceEEEEEEeccCChh-----------------------------------------HHHHHHHH
Confidence 5666666665556788999999876555541 11235566
Q ss_pred HHHhccCceEEEEeecC
Q 017747 210 SEELVVGGRMVLILLGR 226 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~ 226 (366)
.+-|||||+++++.-.+
T Consensus 169 ~r~LKpGG~lvI~ik~r 185 (233)
T 4df3_A 169 RFFLRDGGYMLMAIKAR 185 (233)
T ss_dssp HHHEEEEEEEEEEEECC
T ss_pred HHhccCCCEEEEEEecc
Confidence 78899999999987544
|
| >1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53 | Back alignment and structure |
|---|
Probab=98.33 E-value=3e-06 Score=75.77 Aligned_cols=165 Identities=15% Similarity=0.152 Sum_probs=90.4
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce-
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV- 129 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~- 129 (366)
..+|+|+|||+|..++. +.+. .|..+++..|+.......+-+.+. ..+ ..++
T Consensus 42 ~~~vLDiGcG~G~~~~~--------la~~--------~p~~~v~gvD~s~~~l~~a~~~~~--------~~~---~~~v~ 94 (214)
T 1yzh_A 42 NPIHVEVGSGKGAFVSG--------MAKQ--------NPDINYIGIDIQKSVLSYALDKVL--------EVG---VPNIK 94 (214)
T ss_dssp CCEEEEESCTTSHHHHH--------HHHH--------CTTSEEEEEESCHHHHHHHHHHHH--------HHC---CSSEE
T ss_pred CCeEEEEccCcCHHHHH--------HHHH--------CCCCCEEEEEcCHHHHHHHHHHHH--------HcC---CCCEE
Confidence 56899999999999874 2232 245889999986543322222111 111 1233
Q ss_pred EEeccCCCccc--ccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYG--RLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 130 f~~~vpgSFy~--~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
++.+ +..+ ..+|++++|+++++...+|...-.. . .. -+...||+
T Consensus 95 ~~~~---d~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~---~--------~~--------------------~~~~~~l~ 140 (214)
T 1yzh_A 95 LLWV---DGSDLTDYFEDGEIDRLYLNFSDPWPKKRHE---K--------RR--------------------LTYKTFLD 140 (214)
T ss_dssp EEEC---CSSCGGGTSCTTCCSEEEEESCCCCCSGGGG---G--------GS--------------------TTSHHHHH
T ss_pred EEeC---CHHHHHhhcCCCCCCEEEEECCCCccccchh---h--------hc--------------------cCCHHHHH
Confidence 4443 4333 3478899999999987766331100 0 00 01344667
Q ss_pred HHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchh-hhcccCccccCCCHHHHHHHHhhcCce
Q 017747 208 SRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKE-KLVAYHAHFYAPSKEEIEGEVGREGSF 286 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e-~~d~f~~P~y~ps~eEv~~~i~~~gsf 286 (366)
.-.+-|+|||++++..-.. .. .......+.+.|.-..+ ..|-...+.......++..-....| +
T Consensus 141 ~~~~~LkpgG~l~~~~~~~-----------~~---~~~~~~~~~~~g~~~~~~~~d~~~~~~~~~~~t~~e~~~~~~g-~ 205 (214)
T 1yzh_A 141 TFKRILPENGEIHFKTDNR-----------GL---FEYSLVSFSQYGMKLNGVWLDLHASDFEGNVMTEYEQKFSNKG-Q 205 (214)
T ss_dssp HHHHHSCTTCEEEEEESCH-----------HH---HHHHHHHHHHHTCEEEEEESSGGGSCCCCCCCCHHHHHTGGGC-C
T ss_pred HHHHHcCCCcEEEEEeCCH-----------HH---HHHHHHHHHHCCCeeeeccccccccCCCCCCCcHHHHHHHHCC-C
Confidence 7788999999999975211 11 23333334445632111 1122222333344567777777787 5
Q ss_pred EEeeE
Q 017747 287 KLDQL 291 (366)
Q Consensus 287 ~i~~~ 291 (366)
.|-++
T Consensus 206 ~i~~~ 210 (214)
T 1yzh_A 206 VIYRV 210 (214)
T ss_dssp CCEEE
T ss_pred CeEEE
Confidence 55444
|
| >1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43 | Back alignment and structure |
|---|
Probab=98.29 E-value=6.1e-07 Score=80.21 Aligned_cols=108 Identities=14% Similarity=0.217 Sum_probs=67.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+.. +.+. .+ +++..|+.......+-+.+ .. .+ ..-.
T Consensus 38 ~~~~vLDlG~G~G~~~~~--------l~~~--------~~--~v~~vD~s~~~~~~a~~~~-------~~-~~---~~~~ 88 (227)
T 1ve3_A 38 KRGKVLDLACGVGGFSFL--------LEDY--------GF--EVVGVDISEDMIRKAREYA-------KS-RE---SNVE 88 (227)
T ss_dssp SCCEEEEETCTTSHHHHH--------HHHT--------TC--EEEEEESCHHHHHHHHHHH-------HH-TT---CCCE
T ss_pred CCCeEEEEeccCCHHHHH--------HHHc--------CC--EEEEEECCHHHHHHHHHHH-------Hh-cC---CCce
Confidence 368999999999998764 2221 12 7888888643222221111 11 11 1122
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
|+. +++.+-.+|++++|+++++.++|+... .|...+|+.-
T Consensus 89 ~~~---~d~~~~~~~~~~~D~v~~~~~~~~~~~-------------------------------------~~~~~~l~~~ 128 (227)
T 1ve3_A 89 FIV---GDARKLSFEDKTFDYVIFIDSIVHFEP-------------------------------------LELNQVFKEV 128 (227)
T ss_dssp EEE---CCTTSCCSCTTCEEEEEEESCGGGCCH-------------------------------------HHHHHHHHHH
T ss_pred EEE---CchhcCCCCCCcEEEEEEcCchHhCCH-------------------------------------HHHHHHHHHH
Confidence 333 455544478889999999988554211 2345567788
Q ss_pred HHHhccCceEEEEeecC
Q 017747 210 SEELVVGGRMVLILLGR 226 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~ 226 (366)
.+-|+|||++++.....
T Consensus 129 ~~~L~~gG~l~~~~~~~ 145 (227)
T 1ve3_A 129 RRVLKPSGKFIMYFTDL 145 (227)
T ss_dssp HHHEEEEEEEEEEEECH
T ss_pred HHHcCCCcEEEEEecCh
Confidence 89999999999997754
|
| >2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A | Back alignment and structure |
|---|
Probab=98.27 E-value=4e-06 Score=72.44 Aligned_cols=71 Identities=13% Similarity=0.058 Sum_probs=51.4
Q ss_pred CCCCcccEEEcccccccc-cCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEE
Q 017747 143 FPNNSLHFIHSSNSLHWL-SKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVL 221 (366)
Q Consensus 143 fp~~s~~~~~S~~alhWl-s~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~lvl 221 (366)
+|++++|+++|++++||+ .+. ..+|+.-++-|+|||++++
T Consensus 59 ~~~~~fD~V~~~~~l~~~~~~~---------------------------------------~~~l~~~~r~LkpgG~l~~ 99 (176)
T 2ld4_A 59 HKESSFDIILSGLVPGSTTLHS---------------------------------------AEILAEIARILRPGGCLFL 99 (176)
T ss_dssp CCSSCEEEEEECCSTTCCCCCC---------------------------------------HHHHHHHHHHEEEEEEEEE
T ss_pred CCCCCEeEEEECChhhhcccCH---------------------------------------HHHHHHHHHHCCCCEEEEE
Confidence 378899999999999998 331 1235666899999999999
Q ss_pred EeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEe
Q 017747 222 ILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLD 289 (366)
Q Consensus 222 ~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~ 289 (366)
....... .+ .+.|.++.+++.+.+++.| | +.
T Consensus 100 ~~~~~~~------------------------~~-----------~~~~~~~~~~~~~~l~~aG-f-i~ 130 (176)
T 2ld4_A 100 KEPVETA------------------------VD-----------NNSKVKTASKLCSALTLSG-L-VE 130 (176)
T ss_dssp EEEEESS------------------------SC-----------SSSSSCCHHHHHHHHHHTT-C-EE
T ss_pred Ecccccc------------------------cc-----------cccccCCHHHHHHHHHHCC-C-cE
Confidence 5322110 00 0556778899999999998 7 65
|
| >3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi} | Back alignment and structure |
|---|
Probab=98.27 E-value=4.1e-06 Score=72.56 Aligned_cols=73 Identities=15% Similarity=0.116 Sum_probs=48.5
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++.+ .+ .. +|+..|+....... . .+--
T Consensus 23 ~~~~vLD~GcG~G~~~~~l--------~~--------~~---~v~gvD~s~~~~~~-----~--------------~~~~ 64 (170)
T 3q87_B 23 EMKIVLDLGTSTGVITEQL--------RK--------RN---TVVSTDLNIRALES-----H--------------RGGN 64 (170)
T ss_dssp CSCEEEEETCTTCHHHHHH--------TT--------TS---EEEEEESCHHHHHT-----C--------------SSSC
T ss_pred CCCeEEEeccCccHHHHHH--------Hh--------cC---cEEEEECCHHHHhc-----c--------------cCCe
Confidence 3469999999999988742 11 11 88888986432211 0 1112
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCC
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVP 164 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p 164 (366)
++. +++.+ .++++++|+++|+..+||.+..+
T Consensus 65 ~~~---~d~~~-~~~~~~fD~i~~n~~~~~~~~~~ 95 (170)
T 3q87_B 65 LVR---ADLLC-SINQESVDVVVFNPPYVPDTDDP 95 (170)
T ss_dssp EEE---CSTTT-TBCGGGCSEEEECCCCBTTCCCT
T ss_pred EEE---CChhh-hcccCCCCEEEECCCCccCCccc
Confidence 333 45655 56779999999999999987753
|
| >3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp} | Back alignment and structure |
|---|
Probab=98.25 E-value=2e-06 Score=76.15 Aligned_cols=103 Identities=14% Similarity=0.130 Sum_probs=61.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++. +.+ .+..+++..|+.......+-+.+. ..+. ..--
T Consensus 60 ~~~~vLDiG~G~G~~~~~--------l~~---------~~~~~v~~vD~s~~~~~~a~~~~~--------~~~~--~~v~ 112 (205)
T 3grz_A 60 KPLTVADVGTGSGILAIA--------AHK---------LGAKSVLATDISDESMTAAEENAA--------LNGI--YDIA 112 (205)
T ss_dssp SCCEEEEETCTTSHHHHH--------HHH---------TTCSEEEEEESCHHHHHHHHHHHH--------HTTC--CCCE
T ss_pred CCCEEEEECCCCCHHHHH--------HHH---------CCCCEEEEEECCHHHHHHHHHHHH--------HcCC--CceE
Confidence 457999999999988764 222 122588999986432222211111 1111 1112
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
+.. +++.+ ++++++|+++++..+||+. .+|+.-
T Consensus 113 ~~~---~d~~~--~~~~~fD~i~~~~~~~~~~------------------------------------------~~l~~~ 145 (205)
T 3grz_A 113 LQK---TSLLA--DVDGKFDLIVANILAEILL------------------------------------------DLIPQL 145 (205)
T ss_dssp EEE---SSTTT--TCCSCEEEEEEESCHHHHH------------------------------------------HHGGGS
T ss_pred EEe---ccccc--cCCCCceEEEECCcHHHHH------------------------------------------HHHHHH
Confidence 333 45533 4568999999988777642 223344
Q ss_pred HHHhccCceEEEEeecC
Q 017747 210 SEELVVGGRMVLILLGR 226 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~ 226 (366)
.+-|+|||+++++....
T Consensus 146 ~~~L~~gG~l~~~~~~~ 162 (205)
T 3grz_A 146 DSHLNEDGQVIFSGIDY 162 (205)
T ss_dssp GGGEEEEEEEEEEEEEG
T ss_pred HHhcCCCCEEEEEecCc
Confidence 78899999999975443
|
| >1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43 | Back alignment and structure |
|---|
Probab=98.24 E-value=3.2e-06 Score=77.02 Aligned_cols=106 Identities=16% Similarity=0.253 Sum_probs=65.5
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+ .+. ..+++..|+.......+-+.+. . .+ ..-.
T Consensus 41 ~~~~vLDlGcG~G~~~~~l--------~~~----------~~~v~gvD~s~~~l~~a~~~~~-------~-~~---~~v~ 91 (252)
T 1wzn_A 41 EVRRVLDLACGTGIPTLEL--------AER----------GYEVVGLDLHEEMLRVARRKAK-------E-RN---LKIE 91 (252)
T ss_dssp CCCEEEEETCTTCHHHHHH--------HHT----------TCEEEEEESCHHHHHHHHHHHH-------H-TT---CCCE
T ss_pred CCCEEEEeCCCCCHHHHHH--------HHC----------CCeEEEEECCHHHHHHHHHHHH-------h-cC---CceE
Confidence 4579999999999988742 221 1688999986543322222111 1 11 1122
Q ss_pred EEeccCCCcccccCCCCcccEEEccc-ccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSN-SLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~-alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
|+. +++.+ +-+++++|++++.. .+|+++ ..|...+|+.
T Consensus 92 ~~~---~d~~~-~~~~~~fD~v~~~~~~~~~~~-------------------------------------~~~~~~~l~~ 130 (252)
T 1wzn_A 92 FLQ---GDVLE-IAFKNEFDAVTMFFSTIMYFD-------------------------------------EEDLRKLFSK 130 (252)
T ss_dssp EEE---SCGGG-CCCCSCEEEEEECSSGGGGSC-------------------------------------HHHHHHHHHH
T ss_pred EEE---CChhh-cccCCCccEEEEcCCchhcCC-------------------------------------HHHHHHHHHH
Confidence 333 45544 33357899999863 444431 1245667788
Q ss_pred HHHHhccCceEEEEeec
Q 017747 209 RSEELVVGGRMVLILLG 225 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g 225 (366)
-.+-|+|||++++.+..
T Consensus 131 ~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 131 VAEALKPGGVFITDFPC 147 (252)
T ss_dssp HHHHEEEEEEEEEEEEC
T ss_pred HHHHcCCCeEEEEeccc
Confidence 88999999999998764
|
| >3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A* | Back alignment and structure |
|---|
Probab=98.22 E-value=8.5e-07 Score=80.52 Aligned_cols=137 Identities=18% Similarity=0.245 Sum_probs=79.2
Q ss_pred HHHHHHHHHHHHHHHHHH-------HHhhhhcCCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEe
Q 017747 23 SLQKKASDTVKHITLEAL-------QQLYLEIDPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYL 95 (366)
Q Consensus 23 ~~Q~~~~~~~~~~l~~ai-------~~l~~~~~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~ 95 (366)
..|++.++...|.+.-.. ..++ ....-+|+|+|||+|..++. +.+. .|..+|+.
T Consensus 3 ~~q~~~~~~~~~~~~~~~~~~~~d~~~~f---~~~~~~vLDiGcG~G~~~~~--------lA~~--------~p~~~v~g 63 (218)
T 3dxy_A 3 SGQEHALENYWPVMGVEFSEDMLDFPALF---GREAPVTLEIGFGMGASLVA--------MAKD--------RPEQDFLG 63 (218)
T ss_dssp ----CHHHHHHHHHBCCCCSSCCCHHHHH---SSCCCEEEEESCTTCHHHHH--------HHHH--------CTTSEEEE
T ss_pred HHHHHHHHHHhHHhCCCCCCCCCCHHHHc---CCCCCeEEEEeeeChHHHHH--------HHHH--------CCCCeEEE
Confidence 457777777777654110 0111 12356899999999999875 3232 34588999
Q ss_pred cCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce-EEeccCCCcc---cccCCCCcccEEEcccccccccCCCCcccccc
Q 017747 96 NDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV-YIAGYPGSFY---GRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEM 171 (366)
Q Consensus 96 nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~-f~~~vpgSFy---~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~ 171 (366)
.|+..+....+-+... ..+ ..++ |+. ++.. ...+|++++|.+++++...|-.... .
T Consensus 64 iD~s~~~l~~a~~~~~--------~~~---l~nv~~~~---~Da~~~l~~~~~~~~~d~v~~~~~~p~~~~~~----~-- 123 (218)
T 3dxy_A 64 IEVHSPGVGACLASAH--------EEG---LSNLRVMC---HDAVEVLHKMIPDNSLRMVQLFFPDPWHKARH----N-- 123 (218)
T ss_dssp ECSCHHHHHHHHHHHH--------HTT---CSSEEEEC---SCHHHHHHHHSCTTCEEEEEEESCCCCCSGGG----G--
T ss_pred EEecHHHHHHHHHHHH--------HhC---CCcEEEEE---CCHHHHHHHHcCCCChheEEEeCCCCccchhh----h--
Confidence 9997643333322111 111 2233 333 3443 3358999999999998888833211 0
Q ss_pred cCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEEEe
Q 017747 172 GESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLIL 223 (366)
Q Consensus 172 ~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~lvl~~ 223 (366)
+.++. . ..||+.-++-|+|||++++..
T Consensus 124 -----~rr~~-----~---------------~~~l~~~~r~LkpGG~l~i~t 150 (218)
T 3dxy_A 124 -----KRRIV-----Q---------------VPFAELVKSKLQLGGVFHMAT 150 (218)
T ss_dssp -----GGSSC-----S---------------HHHHHHHHHHEEEEEEEEEEE
T ss_pred -----hhhhh-----h---------------HHHHHHHHHHcCCCcEEEEEe
Confidence 00000 0 136777789999999999986
|
| >3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP} | Back alignment and structure |
|---|
Probab=98.21 E-value=2.3e-06 Score=76.47 Aligned_cols=159 Identities=13% Similarity=0.086 Sum_probs=85.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc-
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS- 128 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~- 128 (366)
...+|+|+|||+|..+.. +.+. .|..+|+..|+.......+.+..... . ...+ .++
T Consensus 27 ~~~~vLDiGcG~G~~~~~--------la~~--------~p~~~v~gvD~s~~~l~~~~~~a~~~---~-~~~~---~~~v 83 (218)
T 3mq2_A 27 YDDVVLDVGTGDGKHPYK--------VARQ--------NPSRLVVALDADKSRMEKISAKAAAK---P-AKGG---LPNL 83 (218)
T ss_dssp SSEEEEEESCTTCHHHHH--------HHHH--------CTTEEEEEEESCGGGGHHHHHHHTSC---G-GGTC---CTTE
T ss_pred CCCEEEEecCCCCHHHHH--------HHHH--------CCCCEEEEEECCHHHHHHHHHHHHHh---h-hhcC---CCce
Confidence 468999999999999875 3232 24489999999876555432111100 0 0011 223
Q ss_pred eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
.|.. +++.+-.+++++ |.++ ..+.|....... -.|...+|+.
T Consensus 84 ~~~~---~d~~~l~~~~~~-d~v~--~~~~~~~~~~~~--------------------------------~~~~~~~l~~ 125 (218)
T 3mq2_A 84 LYLW---ATAERLPPLSGV-GELH--VLMPWGSLLRGV--------------------------------LGSSPEMLRG 125 (218)
T ss_dssp EEEE---CCSTTCCSCCCE-EEEE--EESCCHHHHHHH--------------------------------HTSSSHHHHH
T ss_pred EEEe---cchhhCCCCCCC-CEEE--EEccchhhhhhh--------------------------------hccHHHHHHH
Confidence 3444 456554467766 7666 333332211000 0111234666
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEE
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKL 288 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i 288 (366)
-++-|+|||++++++....-.... . +......+......+++...+++.| |++
T Consensus 126 ~~~~LkpgG~l~~~~~~~~~~~~~------------------------~--~~~~~~~~~~~~~~~~l~~~l~~aG-f~i 178 (218)
T 3mq2_A 126 MAAVCRPGASFLVALNLHAWRPSV------------------------P--EVGEHPEPTPDSADEWLAPRYAEAG-WKL 178 (218)
T ss_dssp HHHTEEEEEEEEEEEEGGGBTTBC------------------------G--GGTTCCCCCHHHHHHHHHHHHHHTT-EEE
T ss_pred HHHHcCCCcEEEEEeccccccccc------------------------c--ccccCCccchHHHHHHHHHHHHHcC-CCc
Confidence 789999999999976433211000 0 0011111111113456888999999 999
Q ss_pred eeEEEEee
Q 017747 289 DQLDMFQV 296 (366)
Q Consensus 289 ~~~e~~~~ 296 (366)
..++.+..
T Consensus 179 ~~~~~~~~ 186 (218)
T 3mq2_A 179 ADCRYLEP 186 (218)
T ss_dssp EEEEEECH
T ss_pred eeeeccch
Confidence 88887643
|
| >3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=98.19 E-value=2.2e-06 Score=80.39 Aligned_cols=100 Identities=10% Similarity=0.003 Sum_probs=64.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..|+.+ .++ ..+|+..|+..++...+-+.+.. .
T Consensus 45 ~g~~VLDlGcGtG~~a~~L--------a~~----------g~~V~gvD~S~~ml~~Ar~~~~~---------------~- 90 (261)
T 3iv6_A 45 PGSTVAVIGASTRFLIEKA--------LER----------GASVTVFDFSQRMCDDLAEALAD---------------R- 90 (261)
T ss_dssp TTCEEEEECTTCHHHHHHH--------HHT----------TCEEEEEESCHHHHHHHHHHTSS---------------S-
T ss_pred CcCEEEEEeCcchHHHHHH--------Hhc----------CCEEEEEECCHHHHHHHHHHHHh---------------c-
Confidence 4579999999999998753 221 16799999876544433332221 1
Q ss_pred EEeccCCCccccc-----CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRL-----FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTL 204 (366)
Q Consensus 130 f~~~vpgSFy~~l-----fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~ 204 (366)
.+.+++..-. .+++++|+++|+.++||+.. .|...
T Consensus 91 ---~v~~~~~~~~~~~~~~~~~~fD~Vv~~~~l~~~~~-------------------------------------~~~~~ 130 (261)
T 3iv6_A 91 ---CVTIDLLDITAEIPKELAGHFDFVLNDRLINRFTT-------------------------------------EEARR 130 (261)
T ss_dssp ---CCEEEECCTTSCCCGGGTTCCSEEEEESCGGGSCH-------------------------------------HHHHH
T ss_pred ---cceeeeeecccccccccCCCccEEEEhhhhHhCCH-------------------------------------HHHHH
Confidence 1112222111 12678999999999998632 23344
Q ss_pred HHHHHHHHhccCceEEEEee
Q 017747 205 FLRSRSEELVVGGRMVLILL 224 (366)
Q Consensus 205 FL~~Ra~EL~~GG~lvl~~~ 224 (366)
.|+.-++-| |||++++++.
T Consensus 131 ~l~~l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 131 ACLGMLSLV-GSGTVRASVK 149 (261)
T ss_dssp HHHHHHHHH-TTSEEEEEEE
T ss_pred HHHHHHHhC-cCcEEEEEec
Confidence 456667778 9999999975
|
| >2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.17 E-value=4.9e-06 Score=73.32 Aligned_cols=123 Identities=14% Similarity=0.081 Sum_probs=76.0
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
....+|+|+|||+|..+..+ .+. .+ .+++..|+.......+-+.... . ..-
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l--------~~~--------~~-~~v~~~D~s~~~~~~a~~~~~~----------~--~~i 91 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYEL--------FLG--------GF-PNVTSVDYSSVVVAAMQACYAH----------V--PQL 91 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHH--------HHT--------TC-CCEEEEESCHHHHHHHHHHTTT----------C--TTC
T ss_pred CCCCeEEEECCCCcHHHHHH--------HHc--------CC-CcEEEEeCCHHHHHHHHHhccc----------C--CCc
Confidence 34679999999999988742 221 12 2788888865433322222210 0 112
Q ss_pred eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
.+.. +++.+-.++++++|+++++.++|.+...... .|+.. .....|...+|+.
T Consensus 92 ~~~~---~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~-------~~~~~-----------------~~~~~~~~~~l~~ 144 (215)
T 2pxx_A 92 RWET---MDVRKLDFPSASFDVVLEKGTLDALLAGERD-------PWTVS-----------------SEGVHTVDQVLSE 144 (215)
T ss_dssp EEEE---CCTTSCCSCSSCEEEEEEESHHHHHTTTCSC-------TTSCC-----------------HHHHHHHHHHHHH
T ss_pred EEEE---cchhcCCCCCCcccEEEECcchhhhcccccc-------ccccc-----------------cchhHHHHHHHHH
Confidence 2333 3444434788999999999999876532111 11110 1124567888899
Q ss_pred HHHHhccCceEEEEeecCC
Q 017747 209 RSEELVVGGRMVLILLGRI 227 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~ 227 (366)
-.+-|+|||++++..++..
T Consensus 145 ~~~~LkpgG~li~~~~~~~ 163 (215)
T 2pxx_A 145 VSRVLVPGGRFISMTSAAP 163 (215)
T ss_dssp HHHHEEEEEEEEEEESCCH
T ss_pred HHHhCcCCCEEEEEeCCCc
Confidence 9999999999999987654
|
| >3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=98.14 E-value=4.9e-06 Score=75.13 Aligned_cols=70 Identities=13% Similarity=0.146 Sum_probs=43.2
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+...+|+|+|||+|..+..+ .+. ..+|+..|+........-+.. .+-
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l--------~~~----------~~~v~~vD~s~~~~~~a~~~~---------------~~~ 93 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARF--------GPQ----------AARWAAYDFSPELLKLARANA---------------PHA 93 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHH--------GGG----------SSEEEEEESCHHHHHHHHHHC---------------TTS
T ss_pred CCCCeEEEeCCCCCHHHHHH--------HHc----------CCEEEEEECCHHHHHHHHHhC---------------CCc
Confidence 34689999999999988642 111 268899998653222222111 112
Q ss_pred eEEeccCCCccccc-CC-CCcccEEEcc
Q 017747 129 VYIAGYPGSFYGRL-FP-NNSLHFIHSS 154 (366)
Q Consensus 129 ~f~~~vpgSFy~~l-fp-~~s~~~~~S~ 154 (366)
.|+. +++.+.+ ++ ++++|+++|+
T Consensus 94 ~~~~---~d~~~~~~~~~~~~fD~v~~~ 118 (226)
T 3m33_A 94 DVYE---WNGKGELPAGLGAPFGLIVSR 118 (226)
T ss_dssp EEEE---CCSCSSCCTTCCCCEEEEEEE
T ss_pred eEEE---cchhhccCCcCCCCEEEEEeC
Confidence 3444 3554444 56 8899999987
|
| >2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=98.13 E-value=6.3e-06 Score=72.43 Aligned_cols=56 Identities=9% Similarity=0.128 Sum_probs=37.4
Q ss_pred CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEEE
Q 017747 143 FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLI 222 (366)
Q Consensus 143 fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~lvl~ 222 (366)
++++++|+++|..++||... ...+ .+ ...+....+|+.-.+-|+|||+|++.
T Consensus 102 ~~~~~fD~v~~~~~~~~~g~---~~~d-----------------------~~--~~~~~~~~~l~~~~~~LkpgG~lv~~ 153 (201)
T 2plw_A 102 LQDKKIDIILSDAAVPCIGN---KIDD-----------------------HL--NSCELTLSITHFMEQYINIGGTYIVK 153 (201)
T ss_dssp HTTCCEEEEEECCCCCCCSC---HHHH-----------------------HH--HHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCCcccEEEeCCCcCCCCC---cccC-----------------------HH--HHHHHHHHHHHHHHHHccCCCEEEEE
Confidence 57789999999999998421 0001 00 01122345677778899999999997
Q ss_pred eecC
Q 017747 223 LLGR 226 (366)
Q Consensus 223 ~~g~ 226 (366)
++..
T Consensus 154 ~~~~ 157 (201)
T 2plw_A 154 MYLG 157 (201)
T ss_dssp EECS
T ss_pred EeCC
Confidence 7654
|
| >1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A* | Back alignment and structure |
|---|
Probab=98.11 E-value=1e-05 Score=68.40 Aligned_cols=111 Identities=14% Similarity=0.181 Sum_probs=70.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+.+.. .|..+++..|+.. ... ++ +-.
T Consensus 22 ~~~~vLd~G~G~G~~~~~l~~~~---------------~~~~~v~~~D~~~-~~~-----~~---------------~~~ 65 (180)
T 1ej0_A 22 PGMTVVDLGAAPGGWSQYVVTQI---------------GGKGRIIACDLLP-MDP-----IV---------------GVD 65 (180)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHH---------------CTTCEEEEEESSC-CCC-----CT---------------TEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHHh---------------CCCCeEEEEECcc-ccc-----cC---------------cEE
Confidence 45799999999999887532221 1236888888764 211 11 111
Q ss_pred EEeccCCCccccc--------CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRL--------FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQED 201 (366)
Q Consensus 130 f~~~vpgSFy~~l--------fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D 201 (366)
+.. +++.+-- ++++++|+++++..+||...... + . ......
T Consensus 66 ~~~---~d~~~~~~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~---~--------------------~-----~~~~~~ 114 (180)
T 1ej0_A 66 FLQ---GDFRDELVMKALLERVGDSKVQVVMSDMAPNMSGTPAV---D--------------------I-----PRAMYL 114 (180)
T ss_dssp EEE---SCTTSHHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHH---H--------------------H-----HHHHHH
T ss_pred EEE---cccccchhhhhhhccCCCCceeEEEECCCccccCCCcc---c--------------------h-----HHHHHH
Confidence 222 3443322 67889999999999999654111 1 0 001223
Q ss_pred HHHHHHHHHHHhccCceEEEEeecCC
Q 017747 202 FTLFLRSRSEELVVGGRMVLILLGRI 227 (366)
Q Consensus 202 ~~~FL~~Ra~EL~~GG~lvl~~~g~~ 227 (366)
...+|+.-.+-|+|||++++......
T Consensus 115 ~~~~l~~~~~~L~~gG~l~~~~~~~~ 140 (180)
T 1ej0_A 115 VELALEMCRDVLAPGGSFVVKVFQGE 140 (180)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEESST
T ss_pred HHHHHHHHHHHcCCCcEEEEEEecCC
Confidence 46778888899999999999876554
|
| >3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus} | Back alignment and structure |
|---|
Probab=98.11 E-value=6.9e-06 Score=78.21 Aligned_cols=144 Identities=19% Similarity=0.174 Sum_probs=83.1
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||||..|..+ .+. +.-+|+.-|+..++.....+.-+ .+
T Consensus 85 ~g~~vLDiGcGTG~~t~~L--------~~~---------ga~~V~aVDvs~~mL~~a~r~~~----------------rv 131 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVM--------LQN---------GAKLVYAVDVGTNQLVWKLRQDD----------------RV 131 (291)
T ss_dssp TTCEEEEETCTTSHHHHHH--------HHT---------TCSEEEEECSSSSCSCHHHHTCT----------------TE
T ss_pred cccEEEecCCCccHHHHHH--------HhC---------CCCEEEEEECCHHHHHHHHHhCc----------------cc
Confidence 4579999999999999642 221 12689999998876543222111 11
Q ss_pred EEeccCCCc--c-cccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSF--Y-GRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 130 f~~~vpgSF--y-~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
-... ...+ . ..-+|..++|++.+..++|++..+ |
T Consensus 132 ~~~~-~~ni~~l~~~~l~~~~fD~v~~d~sf~sl~~v------------------------------------------L 168 (291)
T 3hp7_A 132 RSME-QYNFRYAEPVDFTEGLPSFASIDVSFISLNLI------------------------------------------L 168 (291)
T ss_dssp EEEC-SCCGGGCCGGGCTTCCCSEEEECCSSSCGGGT------------------------------------------H
T ss_pred ceec-ccCceecchhhCCCCCCCEEEEEeeHhhHHHH------------------------------------------H
Confidence 0000 0011 0 112466789999999999987332 2
Q ss_pred HHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCce
Q 017747 207 RSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSF 286 (366)
Q Consensus 207 ~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf 286 (366)
..-++-|+|||++++.. ...- +.-...+. ..|.+.. ...+..+.+++.+.++..| |
T Consensus 169 ~e~~rvLkpGG~lv~lv-kPqf------------e~~~~~~~---~~G~vrd-------~~~~~~~~~~v~~~~~~~G-f 224 (291)
T 3hp7_A 169 PALAKILVDGGQVVALV-KPQF------------EAGREQIG---KNGIVRE-------SSIHEKVLETVTAFAVDYG-F 224 (291)
T ss_dssp HHHHHHSCTTCEEEEEE-CGGG------------TSCGGGCC----CCCCCC-------HHHHHHHHHHHHHHHHHTT-E
T ss_pred HHHHHHcCcCCEEEEEE-Cccc------------ccChhhcC---CCCccCC-------HHHHHHHHHHHHHHHHHCC-C
Confidence 33388999999999974 1111 10000000 0232211 1124457889999999999 9
Q ss_pred EEeeEEE
Q 017747 287 KLDQLDM 293 (366)
Q Consensus 287 ~i~~~e~ 293 (366)
++..+..
T Consensus 225 ~v~~~~~ 231 (291)
T 3hp7_A 225 SVKGLDF 231 (291)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 8866554
|
| >3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15} | Back alignment and structure |
|---|
Probab=98.10 E-value=5.9e-06 Score=74.47 Aligned_cols=106 Identities=19% Similarity=0.270 Sum_probs=67.2
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceE
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVY 130 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 130 (366)
..+|+|+|||+|..+..+ . .. .+++..|+.......+-+.+. . .+ ..--+
T Consensus 34 ~~~vLdiG~G~G~~~~~l--------~---------~~--~~v~~vD~s~~~~~~a~~~~~-------~-~~---~~~~~ 83 (243)
T 3d2l_A 34 GKRIADIGCGTGTATLLL--------A---------DH--YEVTGVDLSEEMLEIAQEKAM-------E-TN---RHVDF 83 (243)
T ss_dssp TCEEEEESCTTCHHHHHH--------T---------TT--SEEEEEESCHHHHHHHHHHHH-------H-TT---CCCEE
T ss_pred CCeEEEecCCCCHHHHHH--------h---------hC--CeEEEEECCHHHHHHHHHhhh-------h-cC---CceEE
Confidence 479999999999988642 1 11 678888886543322221111 1 11 11223
Q ss_pred EeccCCCcccccCCCCcccEEEccc-ccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 131 IAGYPGSFYGRLFPNNSLHFIHSSN-SLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 131 ~~~vpgSFy~~lfp~~s~~~~~S~~-alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
.. +++.+-.++ +++|++++.. ++||+.. ..|...+|+.-
T Consensus 84 ~~---~d~~~~~~~-~~fD~v~~~~~~~~~~~~------------------------------------~~~~~~~l~~~ 123 (243)
T 3d2l_A 84 WV---QDMRELELP-EPVDAITILCDSLNYLQT------------------------------------EADVKQTFDSA 123 (243)
T ss_dssp EE---CCGGGCCCS-SCEEEEEECTTGGGGCCS------------------------------------HHHHHHHHHHH
T ss_pred EE---cChhhcCCC-CCcCEEEEeCCchhhcCC------------------------------------HHHHHHHHHHH
Confidence 33 355433344 8999999987 9998642 13455677788
Q ss_pred HHHhccCceEEEEeecC
Q 017747 210 SEELVVGGRMVLILLGR 226 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~ 226 (366)
.+-|+|||++++.+...
T Consensus 124 ~~~L~pgG~l~~~~~~~ 140 (243)
T 3d2l_A 124 ARLLTDGGKLLFDVHSP 140 (243)
T ss_dssp HHHEEEEEEEEEEEECH
T ss_pred HHhcCCCeEEEEEcCCH
Confidence 89999999999987543
|
| >3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A* | Back alignment and structure |
|---|
Probab=98.06 E-value=6.9e-06 Score=80.97 Aligned_cols=108 Identities=17% Similarity=0.145 Sum_probs=70.9
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++.+ .++ ..+|+..|.........-+.+ .. .+ ...-
T Consensus 233 ~~~~VLDlGcG~G~~~~~l--------a~~----------g~~V~gvDis~~al~~A~~n~-------~~-~~---~~v~ 283 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPL--------ARM----------GAEVVGVEDDLASVLSLQKGL-------EA-NA---LKAQ 283 (381)
T ss_dssp TTCEEEEETCTTSTTHHHH--------HHT----------TCEEEEEESBHHHHHHHHHHH-------HH-TT---CCCE
T ss_pred CCCEEEEEeeeCCHHHHHH--------HHc----------CCEEEEEECCHHHHHHHHHHH-------HH-cC---CCeE
Confidence 4579999999999999753 221 168889998543222221111 11 11 1222
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
|+. +++.+-+.+++++|+++|+..+||...... .+...||+.-
T Consensus 284 ~~~---~D~~~~~~~~~~fD~Ii~npp~~~~~~~~~----------------------------------~~~~~~l~~~ 326 (381)
T 3dmg_A 284 ALH---SDVDEALTEEARFDIIVTNPPFHVGGAVIL----------------------------------DVAQAFVNVA 326 (381)
T ss_dssp EEE---CSTTTTSCTTCCEEEEEECCCCCTTCSSCC----------------------------------HHHHHHHHHH
T ss_pred EEE---cchhhccccCCCeEEEEECCchhhcccccH----------------------------------HHHHHHHHHH
Confidence 333 466666667789999999999998443221 2455678888
Q ss_pred HHHhccCceEEEEe
Q 017747 210 SEELVVGGRMVLIL 223 (366)
Q Consensus 210 a~EL~~GG~lvl~~ 223 (366)
.+-|+|||+++++.
T Consensus 327 ~~~LkpGG~l~iv~ 340 (381)
T 3dmg_A 327 AARLRPGGVFFLVS 340 (381)
T ss_dssp HHHEEEEEEEEEEE
T ss_pred HHhcCcCcEEEEEE
Confidence 99999999999985
|
| >1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A* | Back alignment and structure |
|---|
Probab=98.04 E-value=7.3e-06 Score=74.35 Aligned_cols=107 Identities=13% Similarity=0.129 Sum_probs=66.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+.. +.+ ..+ .+++..|+..+....+-+... .. ..++
T Consensus 60 ~~~~vLDiGcGtG~~~~~--------l~~--------~~~-~~v~gvD~s~~~l~~a~~~~~--------~~----~~~v 110 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASK--------VQE--------API-DEHWIIECNDGVFQRLRDWAP--------RQ----THKV 110 (236)
T ss_dssp TCEEEEEECCTTSHHHHH--------HHT--------SCE-EEEEEEECCHHHHHHHHHHGG--------GC----SSEE
T ss_pred CCCeEEEEeccCCHHHHH--------HHh--------cCC-CeEEEEcCCHHHHHHHHHHHH--------hc----CCCe
Confidence 468999999999998864 211 122 488999987643333322111 00 1122
Q ss_pred -EEeccCCCcccc--cCCCCcccEEEc-ccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGR--LFPNNSLHFIHS-SNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLF 205 (366)
Q Consensus 130 -f~~~vpgSFy~~--lfp~~s~~~~~S-~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~F 205 (366)
++. +++.+. -+|++++|++++ .+++++ .... ..++..+
T Consensus 111 ~~~~---~d~~~~~~~~~~~~fD~V~~d~~~~~~-~~~~----------------------------------~~~~~~~ 152 (236)
T 1zx0_A 111 IPLK---GLWEDVAPTLPDGHFDGILYDTYPLSE-ETWH----------------------------------THQFNFI 152 (236)
T ss_dssp EEEE---SCHHHHGGGSCTTCEEEEEECCCCCBG-GGTT----------------------------------THHHHHH
T ss_pred EEEe---cCHHHhhcccCCCceEEEEECCcccch-hhhh----------------------------------hhhHHHH
Confidence 333 466544 478899999999 666522 2211 1234557
Q ss_pred HHHHHHHhccCceEEEEe
Q 017747 206 LRSRSEELVVGGRMVLIL 223 (366)
Q Consensus 206 L~~Ra~EL~~GG~lvl~~ 223 (366)
|+.-.+-|+|||+|++..
T Consensus 153 l~~~~r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 153 KNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp HHTHHHHEEEEEEEEECC
T ss_pred HHHHHHhcCCCeEEEEEe
Confidence 778889999999998764
|
| >3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A* | Back alignment and structure |
|---|
Probab=98.03 E-value=1.2e-05 Score=69.86 Aligned_cols=115 Identities=13% Similarity=0.157 Sum_probs=63.6
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+...+|+|+|||+|..|+.+ .+ . ..+|+..|+.......+-+.+. . .+ ..+
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l--------a~---------~-~~~v~~vD~s~~~l~~a~~~~~-------~-~~---~~~ 71 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFL--------AG---------L-SKKVYAFDVQEQALGKTSQRLS-------D-LG---IEN 71 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHH--------HT---------T-SSEEEEEESCHHHHHHHHHHHH-------H-HT---CCC
T ss_pred CCCCEEEEEcCCCCHHHHHH--------HH---------h-CCEEEEEECCHHHHHHHHHHHH-------H-cC---CCc
Confidence 34579999999999999752 11 1 3789999986543332222111 1 11 123
Q ss_pred e-EEeccCCCccccc-CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYGRL-FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 129 ~-f~~~vpgSFy~~l-fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
+ |+. +++..-. ++++++|+++++ ++|+......+.. ...+...+|
T Consensus 72 v~~~~---~~~~~l~~~~~~~fD~v~~~--~~~~~~~~~~~~~----------------------------~~~~~~~~l 118 (185)
T 3mti_A 72 TELIL---DGHENLDHYVREPIRAAIFN--LGYLPSADKSVIT----------------------------KPHTTLEAI 118 (185)
T ss_dssp EEEEE---SCGGGGGGTCCSCEEEEEEE--EC---------------------------------------CHHHHHHHH
T ss_pred EEEEe---CcHHHHHhhccCCcCEEEEe--CCCCCCcchhccc----------------------------ChhhHHHHH
Confidence 3 333 3442211 568899999876 3454321111100 013344567
Q ss_pred HHHHHHhccCceEEEEeec
Q 017747 207 RSRSEELVVGGRMVLILLG 225 (366)
Q Consensus 207 ~~Ra~EL~~GG~lvl~~~g 225 (366)
+.-.+-|+|||++++....
T Consensus 119 ~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 119 EKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp HHHHHHEEEEEEEEEEEC-
T ss_pred HHHHHhcCCCcEEEEEEeC
Confidence 7778999999999998753
|
| >3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.03 E-value=5.3e-06 Score=73.53 Aligned_cols=99 Identities=14% Similarity=0.064 Sum_probs=65.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+ .+. ..+|+..|........+-+.+. ..+ ..++
T Consensus 77 ~~~~vLdiG~G~G~~~~~l--------a~~----------~~~v~~vD~~~~~~~~a~~~~~--------~~~---~~~v 127 (210)
T 3lbf_A 77 PQSRVLEIGTGSGYQTAIL--------AHL----------VQHVCSVERIKGLQWQARRRLK--------NLD---LHNV 127 (210)
T ss_dssp TTCEEEEECCTTSHHHHHH--------HHH----------SSEEEEEESCHHHHHHHHHHHH--------HTT---CCSE
T ss_pred CCCEEEEEcCCCCHHHHHH--------HHh----------CCEEEEEecCHHHHHHHHHHHH--------HcC---CCce
Confidence 4689999999999998753 221 1678888886432222221111 111 1232
Q ss_pred -EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
+.. ++..+.+.+.+++|+++++.++||+.+ . +
T Consensus 128 ~~~~---~d~~~~~~~~~~~D~i~~~~~~~~~~~---~-----------------------~------------------ 160 (210)
T 3lbf_A 128 STRH---GDGWQGWQARAPFDAIIVTAAPPEIPT---A-----------------------L------------------ 160 (210)
T ss_dssp EEEE---SCGGGCCGGGCCEEEEEESSBCSSCCT---H-----------------------H------------------
T ss_pred EEEE---CCcccCCccCCCccEEEEccchhhhhH---H-----------------------H------------------
Confidence 333 566666667789999999999988532 1 1
Q ss_pred HHHHhccCceEEEEeec
Q 017747 209 RSEELVVGGRMVLILLG 225 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g 225 (366)
.+-|+|||+|++.+..
T Consensus 161 -~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 161 -MTQLDEGGILVLPVGE 176 (210)
T ss_dssp -HHTEEEEEEEEEEECS
T ss_pred -HHhcccCcEEEEEEcC
Confidence 6789999999999876
|
| >3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A* | Back alignment and structure |
|---|
Probab=98.02 E-value=3.3e-05 Score=76.66 Aligned_cols=125 Identities=14% Similarity=0.118 Sum_probs=75.6
Q ss_pred CCceEEEeecCC------CCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcC
Q 017747 49 PKTINIADLGCS------SGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERG 122 (366)
Q Consensus 49 ~~~~~IaDlGCs------~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~ 122 (366)
.++.+|+|+||| +|..|+.++... .|..+|+..|+..+.. + ..
T Consensus 215 ~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~---------------fP~a~V~GVDiSp~m~---~--~~----------- 263 (419)
T 3sso_A 215 NQQVRVLEIGVGGYKHPEWGGGSLRMWKSF---------------FPRGQIYGLDIMDKSH---V--DE----------- 263 (419)
T ss_dssp TSCCEEEEECCSCTTCSSCCCHHHHHHHHH---------------CTTCEEEEEESSCCGG---G--CB-----------
T ss_pred CCCCEEEEEecCCCcCCCCCHHHHHHHHHh---------------CCCCEEEEEECCHHHh---h--cC-----------
Confidence 457899999999 788887532221 2448999999977641 0 00
Q ss_pred CCCCCceEEeccCCCcccccCC------CCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHH
Q 017747 123 GGSSPSVYIAGYPGSFYGRLFP------NNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFK 196 (366)
Q Consensus 123 ~~~~~~~f~~~vpgSFy~~lfp------~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~ 196 (366)
.+-.|+.+ +..+--|+ ++++|+++|..+ ||..
T Consensus 264 ---~rI~fv~G---Da~dlpf~~~l~~~d~sFDlVisdgs-H~~~----------------------------------- 301 (419)
T 3sso_A 264 ---LRIRTIQG---DQNDAEFLDRIARRYGPFDIVIDDGS-HINA----------------------------------- 301 (419)
T ss_dssp ---TTEEEEEC---CTTCHHHHHHHHHHHCCEEEEEECSC-CCHH-----------------------------------
T ss_pred ---CCcEEEEe---cccccchhhhhhcccCCccEEEECCc-ccch-----------------------------------
Confidence 11234443 44333344 689999999754 5421
Q ss_pred HHHHHHHHHHHHHHHHhccCceEEEEeecCCCCCCCC------CCchhHHHHHHHHHHHH
Q 017747 197 QFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVD------RGNSFFWELLSRSLAIL 250 (366)
Q Consensus 197 Q~~~D~~~FL~~Ra~EL~~GG~lvl~~~g~~~~~~~~------~~~~~~~~~l~~al~~m 250 (366)
|+..+|+.-.+-|||||++++.-+-..-..... .....+.+.++..+..+
T Consensus 302 ----d~~~aL~el~rvLKPGGvlVi~Dl~tsy~p~f~G~~~~~~~~~tii~~lk~l~D~l 357 (419)
T 3sso_A 302 ----HVRTSFAALFPHVRPGGLYVIEDMWTAYWPGFGGQADPQECSGTSLGLLKSLIDAI 357 (419)
T ss_dssp ----HHHHHHHHHGGGEEEEEEEEEECGGGGGCTBTTCCSSTTCCTTSHHHHHHHHHHHH
T ss_pred ----hHHHHHHHHHHhcCCCeEEEEEecccccCcccCCCccCCcchhHHHHHHHHHHHHh
Confidence 234456777899999999999855422111110 11123566677666665
|
| >3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0 | Back alignment and structure |
|---|
Probab=98.02 E-value=1.4e-05 Score=70.69 Aligned_cols=103 Identities=12% Similarity=0.056 Sum_probs=63.5
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++. +.+. .|..+++..|........+-+.+. . .+ ..++
T Consensus 40 ~~~~vLDiG~G~G~~~~~--------la~~--------~~~~~v~~vD~s~~~~~~a~~~~~-------~-~~---~~~v 92 (204)
T 3e05_A 40 DDLVMWDIGAGSASVSIE--------ASNL--------MPNGRIFALERNPQYLGFIRDNLK-------K-FV---ARNV 92 (204)
T ss_dssp TTCEEEEETCTTCHHHHH--------HHHH--------CTTSEEEEEECCHHHHHHHHHHHH-------H-HT---CTTE
T ss_pred CCCEEEEECCCCCHHHHH--------HHHH--------CCCCEEEEEeCCHHHHHHHHHHHH-------H-hC---CCcE
Confidence 457999999999999875 3332 234789999986543322222111 1 11 1122
Q ss_pred -EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
++. +++.+.+.+.+++|++++..+++ +...+|+.
T Consensus 93 ~~~~---~d~~~~~~~~~~~D~i~~~~~~~------------------------------------------~~~~~l~~ 127 (204)
T 3e05_A 93 TLVE---AFAPEGLDDLPDPDRVFIGGSGG------------------------------------------MLEEIIDA 127 (204)
T ss_dssp EEEE---CCTTTTCTTSCCCSEEEESCCTT------------------------------------------CHHHHHHH
T ss_pred EEEe---CChhhhhhcCCCCCEEEECCCCc------------------------------------------CHHHHHHH
Confidence 222 45555554457899998876553 12245666
Q ss_pred HHHHhccCceEEEEee
Q 017747 209 RSEELVVGGRMVLILL 224 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~ 224 (366)
-.+-|+|||++++...
T Consensus 128 ~~~~LkpgG~l~~~~~ 143 (204)
T 3e05_A 128 VDRRLKSEGVIVLNAV 143 (204)
T ss_dssp HHHHCCTTCEEEEEEC
T ss_pred HHHhcCCCeEEEEEec
Confidence 7889999999999763
|
| >3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae} | Back alignment and structure |
|---|
Probab=98.00 E-value=9.9e-06 Score=69.41 Aligned_cols=104 Identities=16% Similarity=0.189 Sum_probs=64.5
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++.+ .+ ..|..+++..|+.......+-+.+. ..+. ..++
T Consensus 25 ~~~~vldiG~G~G~~~~~l--------~~--------~~~~~~v~~vD~~~~~~~~a~~~~~--------~~~~--~~~~ 78 (178)
T 3hm2_A 25 PHETLWDIGGGSGSIAIEW--------LR--------STPQTTAVCFEISEERRERILSNAI--------NLGV--SDRI 78 (178)
T ss_dssp TTEEEEEESTTTTHHHHHH--------HT--------TSSSEEEEEECSCHHHHHHHHHHHH--------TTTC--TTSE
T ss_pred CCCeEEEeCCCCCHHHHHH--------HH--------HCCCCeEEEEeCCHHHHHHHHHHHH--------HhCC--CCCE
Confidence 4579999999999988742 12 1245889999986543322221111 1111 1145
Q ss_pred EEeccCCCcccccCCC--CcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPN--NSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~--~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
++. ++..+ .+|. +++|+++++.++|| +. +|+
T Consensus 79 ~~~---~d~~~-~~~~~~~~~D~i~~~~~~~~----~~---------------------------------------~l~ 111 (178)
T 3hm2_A 79 AVQ---QGAPR-AFDDVPDNPDVIFIGGGLTA----PG---------------------------------------VFA 111 (178)
T ss_dssp EEE---CCTTG-GGGGCCSCCSEEEECC-TTC----TT---------------------------------------HHH
T ss_pred EEe---cchHh-hhhccCCCCCEEEECCcccH----HH---------------------------------------HHH
Confidence 444 34433 3444 89999999999988 21 134
Q ss_pred HHHHHhccCceEEEEeecC
Q 017747 208 SRSEELVVGGRMVLILLGR 226 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~g~ 226 (366)
.-.+-|+|||++++..+..
T Consensus 112 ~~~~~L~~gG~l~~~~~~~ 130 (178)
T 3hm2_A 112 AAWKRLPVGGRLVANAVTV 130 (178)
T ss_dssp HHHHTCCTTCEEEEEECSH
T ss_pred HHHHhcCCCCEEEEEeecc
Confidence 4478899999999987544
|
| >3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A* | Back alignment and structure |
|---|
Probab=97.97 E-value=1.5e-05 Score=72.60 Aligned_cols=71 Identities=15% Similarity=0.115 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHh
Q 017747 202 FTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVG 281 (366)
Q Consensus 202 ~~~FL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~ 281 (366)
...+|+.-++-|||||+|++........ +.....++.+ ....|.|++. +|+.+.++
T Consensus 118 ~~~~l~~~~r~LkpGG~l~i~~~~~~~~-----------~~~~~~~~~~------------~~~~~~~~~~-~el~~~l~ 173 (225)
T 3p2e_A 118 NRDILSNVADLAKKEAHFEFVTTYSDSY-----------EEAEIKKRGL------------PLLSKAYFLS-EQYKAELS 173 (225)
T ss_dssp CHHHHHHHHTTEEEEEEEEEEECCCC-------------------------------------CCHHHHHS-HHHHHHHH
T ss_pred hHHHHHHHHHhcCCCcEEEEEEeccccc-----------hhchhhhcCC------------CCCChhhcch-HHHHHHHH
Confidence 3456777789999999999954322211 1111001100 0112333332 46999999
Q ss_pred hcCceEEeeEEEEeec
Q 017747 282 REGSFKLDQLDMFQVE 297 (366)
Q Consensus 282 ~~gsf~i~~~e~~~~~ 297 (366)
+.| |++...+.+...
T Consensus 174 ~aG-f~v~~~~~~~~~ 188 (225)
T 3p2e_A 174 NSG-FRIDDVKELDNE 188 (225)
T ss_dssp HHT-CEEEEEEEECHH
T ss_pred HcC-CCeeeeeecCHH
Confidence 999 999888887643
|
| >2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53 | Back alignment and structure |
|---|
Probab=97.97 E-value=1.2e-05 Score=72.38 Aligned_cols=112 Identities=13% Similarity=0.199 Sum_probs=67.7
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce-
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV- 129 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~- 129 (366)
..+|+|+|||+|..++. +.+. .|..+++..|+.......+-+.+ . ..+ ..++
T Consensus 39 ~~~vLDiGcG~G~~~~~--------la~~--------~p~~~v~giD~s~~~l~~a~~~~-------~-~~~---~~nv~ 91 (213)
T 2fca_A 39 NPIHIEVGTGKGQFISG--------MAKQ--------NPDINYIGIELFKSVIVTAVQKV-------K-DSE---AQNVK 91 (213)
T ss_dssp CCEEEEECCTTSHHHHH--------HHHH--------CTTSEEEEECSCHHHHHHHHHHH-------H-HSC---CSSEE
T ss_pred CceEEEEecCCCHHHHH--------HHHH--------CCCCCEEEEEechHHHHHHHHHH-------H-HcC---CCCEE
Confidence 46899999999999875 3332 34588999998754332222111 1 111 2233
Q ss_pred EEeccCCCccc--ccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYG--RLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 130 f~~~vpgSFy~--~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
|+. ++..+ ..+|++++|.++++...+|...... +.++ ....||+
T Consensus 92 ~~~---~d~~~l~~~~~~~~~d~v~~~~~~p~~~~~~~-----------~~rl--------------------~~~~~l~ 137 (213)
T 2fca_A 92 LLN---IDADTLTDVFEPGEVKRVYLNFSDPWPKKRHE-----------KRRL--------------------TYSHFLK 137 (213)
T ss_dssp EEC---CCGGGHHHHCCTTSCCEEEEESCCCCCSGGGG-----------GGST--------------------TSHHHHH
T ss_pred EEe---CCHHHHHhhcCcCCcCEEEEECCCCCcCcccc-----------cccc--------------------CcHHHHH
Confidence 333 34433 3488999999998877777432100 0000 0134567
Q ss_pred HHHHHhccCceEEEEe
Q 017747 208 SRSEELVVGGRMVLIL 223 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~ 223 (366)
.-++-|+|||++++..
T Consensus 138 ~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 138 KYEEVMGKGGSIHFKT 153 (213)
T ss_dssp HHHHHHTTSCEEEEEE
T ss_pred HHHHHcCCCCEEEEEe
Confidence 7789999999999986
|
| >3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405} | Back alignment and structure |
|---|
Probab=97.95 E-value=3e-05 Score=67.87 Aligned_cols=118 Identities=15% Similarity=0.151 Sum_probs=68.5
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++.+...+ .|..+++..|+.......+-+.+. . .+. ..++
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~---------------~~~~~v~~vD~s~~~~~~a~~~~~-------~-~~~--~~~v 76 (197)
T 3eey_A 22 EGDTVVDATCGNGNDTAFLASLV---------------GENGRVFGFDIQDKAIANTTKKLT-------D-LNL--IDRV 76 (197)
T ss_dssp TTCEEEESCCTTSHHHHHHHHHH---------------CTTCEEEEECSCHHHHHHHHHHHH-------H-TTC--GGGE
T ss_pred CCCEEEEcCCCCCHHHHHHHHHh---------------CCCCEEEEEECCHHHHHHHHHHHH-------H-cCC--CCCe
Confidence 35799999999999887533222 123589999986543333222211 1 111 0122
Q ss_pred -EEeccCCCccccc-CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRL-FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 130 -f~~~vpgSFy~~l-fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
++. +++.+-. ++++++|+++++..+ +|..-. .+. .. .+|...+|+
T Consensus 77 ~~~~---~d~~~~~~~~~~~fD~v~~~~~~-----~~~~~~----------~~~----~~-----------~~~~~~~l~ 123 (197)
T 3eey_A 77 TLIK---DGHQNMDKYIDCPVKAVMFNLGY-----LPSGDH----------SIS----TR-----------PETTIQALS 123 (197)
T ss_dssp EEEC---SCGGGGGGTCCSCEEEEEEEESB-----CTTSCT----------TCB----CC-----------HHHHHHHHH
T ss_pred EEEE---CCHHHHhhhccCCceEEEEcCCc-----ccCccc----------ccc----cC-----------cccHHHHHH
Confidence 333 4553333 667899999988665 221100 000 00 124455788
Q ss_pred HHHHHhccCceEEEEeec
Q 017747 208 SRSEELVVGGRMVLILLG 225 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~g 225 (366)
.-.+-|+|||++++....
T Consensus 124 ~~~~~Lk~gG~l~~~~~~ 141 (197)
T 3eey_A 124 KAMELLVTGGIITVVIYY 141 (197)
T ss_dssp HHHHHEEEEEEEEEEECC
T ss_pred HHHHhCcCCCEEEEEEcc
Confidence 888999999999998653
|
| >1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4 | Back alignment and structure |
|---|
Probab=97.94 E-value=6.9e-06 Score=70.93 Aligned_cols=107 Identities=14% Similarity=0.185 Sum_probs=68.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc-
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS- 128 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~- 128 (366)
...+|+|+|||+|..+..+ .+ . ..+++..|+.......+-+.+. . .+ ..+
T Consensus 52 ~~~~vLdiG~G~G~~~~~~--------~~--------~--~~~v~~~D~~~~~~~~a~~~~~-------~-~~---~~~~ 102 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIAL--------AD--------E--VKSTTMADINRRAIKLAKENIK-------L-NN---LDNY 102 (194)
T ss_dssp TTCEEEEETCTTSHHHHHH--------GG--------G--SSEEEEEESCHHHHHHHHHHHH-------H-TT---CTTS
T ss_pred CCCeEEEeCCCCCHHHHHH--------HH--------c--CCeEEEEECCHHHHHHHHHHHH-------H-cC---CCcc
Confidence 4579999999999988642 11 1 2688999986533222221111 1 11 111
Q ss_pred -e-EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 129 -V-YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 129 -~-f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
+ +.. +++.+ .++++++|+++++..+||- ..+...+|
T Consensus 103 ~~~~~~---~d~~~-~~~~~~~D~v~~~~~~~~~--------------------------------------~~~~~~~l 140 (194)
T 1dus_A 103 DIRVVH---SDLYE-NVKDRKYNKIITNPPIRAG--------------------------------------KEVLHRII 140 (194)
T ss_dssp CEEEEE---CSTTT-TCTTSCEEEEEECCCSTTC--------------------------------------HHHHHHHH
T ss_pred ceEEEE---Cchhc-ccccCCceEEEECCCcccc--------------------------------------hhHHHHHH
Confidence 2 333 35544 5567899999998877761 12455677
Q ss_pred HHHHHHhccCceEEEEeecCC
Q 017747 207 RSRSEELVVGGRMVLILLGRI 227 (366)
Q Consensus 207 ~~Ra~EL~~GG~lvl~~~g~~ 227 (366)
+.-.+-|+|||++++......
T Consensus 141 ~~~~~~L~~gG~l~~~~~~~~ 161 (194)
T 1dus_A 141 EEGKELLKDNGEIWVVIQTKQ 161 (194)
T ss_dssp HHHHHHEEEEEEEEEEEESTH
T ss_pred HHHHHHcCCCCEEEEEECCCC
Confidence 788999999999999987653
|
| >3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A* | Back alignment and structure |
|---|
Probab=97.92 E-value=1.6e-05 Score=77.05 Aligned_cols=106 Identities=14% Similarity=0.040 Sum_probs=66.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
+..+|+|+|||+|..++.+ .+. +..+|+..|+. .....+-+.+ ...+.. ..--
T Consensus 66 ~~~~VLDvGcG~G~~~~~l--------a~~---------g~~~v~gvD~s-~~l~~a~~~~--------~~~~~~-~~v~ 118 (349)
T 3q7e_A 66 KDKVVLDVGSGTGILCMFA--------AKA---------GARKVIGIECS-SISDYAVKIV--------KANKLD-HVVT 118 (349)
T ss_dssp TTCEEEEESCTTSHHHHHH--------HHT---------TCSEEEEEECS-THHHHHHHHH--------HHTTCT-TTEE
T ss_pred CCCEEEEEeccchHHHHHH--------HHC---------CCCEEEEECcH-HHHHHHHHHH--------HHcCCC-CcEE
Confidence 3579999999999988752 221 22689999987 3222221111 111211 1112
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
|+. ++..+-.+|++++|+++|....+++...+ ++..+|..+
T Consensus 119 ~~~---~d~~~~~~~~~~fD~Iis~~~~~~l~~~~------------------------------------~~~~~l~~~ 159 (349)
T 3q7e_A 119 IIK---GKVEEVELPVEKVDIIISEWMGYCLFYES------------------------------------MLNTVLHAR 159 (349)
T ss_dssp EEE---SCTTTCCCSSSCEEEEEECCCBBTBTBTC------------------------------------CHHHHHHHH
T ss_pred EEE---CcHHHccCCCCceEEEEEccccccccCch------------------------------------hHHHHHHHH
Confidence 344 46655458889999999987666653321 234567888
Q ss_pred HHHhccCceEEE
Q 017747 210 SEELVVGGRMVL 221 (366)
Q Consensus 210 a~EL~~GG~lvl 221 (366)
.+-|+|||+|+.
T Consensus 160 ~r~LkpgG~li~ 171 (349)
T 3q7e_A 160 DKWLAPDGLIFP 171 (349)
T ss_dssp HHHEEEEEEEES
T ss_pred HHhCCCCCEEcc
Confidence 999999999973
|
| >3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.91 E-value=1.2e-05 Score=78.91 Aligned_cols=108 Identities=16% Similarity=0.073 Sum_probs=67.6
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
.+..+|+|+|||+|..++.+ .+. | . .+|+..|+. +....+-+.+. ..+.. ..-
T Consensus 62 ~~~~~VLDlGcGtG~ls~~l--------a~~-----g---~-~~V~gvD~s-~~~~~a~~~~~--------~~~~~-~~v 114 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWS--------AQA-----G---A-RKVYAVEAT-KMADHARALVK--------ANNLD-HIV 114 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHH--------HHT-----T---C-SEEEEEESS-TTHHHHHHHHH--------HTTCT-TTE
T ss_pred CCCCEEEEeccCcCHHHHHH--------Hhc-----C---C-CEEEEEccH-HHHHHHHHHHH--------HcCCC-CeE
Confidence 34689999999999988752 221 1 1 489999987 54433322211 11211 112
Q ss_pred eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
.++. ++..+-.+| +++|+++|....|++... .++..+|+.
T Consensus 115 ~~~~---~d~~~~~~~-~~~D~Iv~~~~~~~l~~e------------------------------------~~~~~~l~~ 154 (376)
T 3r0q_C 115 EVIE---GSVEDISLP-EKVDVIISEWMGYFLLRE------------------------------------SMFDSVISA 154 (376)
T ss_dssp EEEE---SCGGGCCCS-SCEEEEEECCCBTTBTTT------------------------------------CTHHHHHHH
T ss_pred EEEE---CchhhcCcC-CcceEEEEcChhhcccch------------------------------------HHHHHHHHH
Confidence 2444 455443455 899999997766776431 134566888
Q ss_pred HHHHhccCceEEEEe
Q 017747 209 RSEELVVGGRMVLIL 223 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~ 223 (366)
+.+-|+|||+|++.-
T Consensus 155 ~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 155 RDRWLKPTGVMYPSH 169 (376)
T ss_dssp HHHHEEEEEEEESSE
T ss_pred HHhhCCCCeEEEEec
Confidence 899999999998753
|
| >1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A* | Back alignment and structure |
|---|
Probab=97.91 E-value=1.7e-05 Score=74.83 Aligned_cols=124 Identities=13% Similarity=0.155 Sum_probs=67.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchh------HHHHhhhc--
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDF------HRQLRNER-- 121 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~------~~~~~~~~-- 121 (366)
.+.+|+|+|||||..+..+.- .+.+.. +......+|+..|+..+.-...-+..... ...+....
T Consensus 105 ~~~rIld~GCgTGee~ysiAi----~L~e~~----~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~ 176 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAI----TLADAL----GMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFM 176 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHH----HHHHHH----CSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEE
T ss_pred CCcEEEEeeccCChhHHHHHH----HHHHhc----ccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhh
Confidence 468999999999985421100 122221 11111379999999876555544432110 00000000
Q ss_pred -CCCC-C-----------CceEEeccCCCcccccCC-CCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCC
Q 017747 122 -GGGS-S-----------PSVYIAGYPGSFYGRLFP-NNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSP 187 (366)
Q Consensus 122 -~~~~-~-----------~~~f~~~vpgSFy~~lfp-~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~ 187 (366)
+.+. . .-.|.. ++..+.-+| .+++|+++|.+.++|++. +
T Consensus 177 ~~~~~~~~~~~v~~~lr~~V~F~~---~dl~~~~~~~~~~fDlI~crnvliyf~~-~----------------------- 229 (274)
T 1af7_A 177 RGTGPHEGLVRVRQELANYVEFSS---VNLLEKQYNVPGPFDAIFCRNVMIYFDK-T----------------------- 229 (274)
T ss_dssp ECCTTSCSEEEECHHHHTTEEEEE---CCTTCSSCCCCCCEEEEEECSSGGGSCH-H-----------------------
T ss_pred ccccCCCCceeechhhcccCeEEe---cccCCCCCCcCCCeeEEEECCchHhCCH-H-----------------------
Confidence 0000 0 011222 233332244 578999999999999743 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEE
Q 017747 188 SAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVL 221 (366)
Q Consensus 188 ~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~lvl 221 (366)
+....|+.-++-|+|||.|++
T Consensus 230 -------------~~~~vl~~~~~~L~pgG~L~l 250 (274)
T 1af7_A 230 -------------TQEDILRRFVPLLKPDGLLFA 250 (274)
T ss_dssp -------------HHHHHHHHHGGGEEEEEEEEE
T ss_pred -------------HHHHHHHHHHHHhCCCcEEEE
Confidence 123445667899999999987
|
| >2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A* | Back alignment and structure |
|---|
Probab=97.89 E-value=1.5e-05 Score=73.72 Aligned_cols=100 Identities=19% Similarity=0.193 Sum_probs=60.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++. +.+. | .+|+..|+........-+... . ++ ..--
T Consensus 120 ~~~~VLDiGcG~G~l~~~--------la~~-----g-----~~v~gvDi~~~~v~~a~~n~~-------~-~~---~~v~ 170 (254)
T 2nxc_A 120 PGDKVLDLGTGSGVLAIA--------AEKL-----G-----GKALGVDIDPMVLPQAEANAK-------R-NG---VRPR 170 (254)
T ss_dssp TTCEEEEETCTTSHHHHH--------HHHT-----T-----CEEEEEESCGGGHHHHHHHHH-------H-TT---CCCE
T ss_pred CCCEEEEecCCCcHHHHH--------HHHh-----C-----CeEEEEECCHHHHHHHHHHHH-------H-cC---CcEE
Confidence 457999999999998864 2221 1 288999986543332222111 1 11 1111
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
+. .+++.+ .+|++++|+++++...|++ ..++..-
T Consensus 171 ~~---~~d~~~-~~~~~~fD~Vv~n~~~~~~------------------------------------------~~~l~~~ 204 (254)
T 2nxc_A 171 FL---EGSLEA-ALPFGPFDLLVANLYAELH------------------------------------------AALAPRY 204 (254)
T ss_dssp EE---ESCHHH-HGGGCCEEEEEEECCHHHH------------------------------------------HHHHHHH
T ss_pred EE---ECChhh-cCcCCCCCEEEECCcHHHH------------------------------------------HHHHHHH
Confidence 22 245543 3577899999987544432 2345556
Q ss_pred HHHhccCceEEEEee
Q 017747 210 SEELVVGGRMVLILL 224 (366)
Q Consensus 210 a~EL~~GG~lvl~~~ 224 (366)
.+-|+|||+++++..
T Consensus 205 ~~~LkpgG~lils~~ 219 (254)
T 2nxc_A 205 REALVPGGRALLTGI 219 (254)
T ss_dssp HHHEEEEEEEEEEEE
T ss_pred HHHcCCCCEEEEEee
Confidence 788999999999753
|
| >1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33 | Back alignment and structure |
|---|
Probab=97.88 E-value=1.7e-05 Score=73.15 Aligned_cols=98 Identities=19% Similarity=0.242 Sum_probs=61.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+ .+. .|..+++..|+..+.....-+.. ..-.
T Consensus 85 ~~~~vLdiG~G~G~~~~~l--------~~~--------~~~~~v~~vD~s~~~~~~a~~~~---------------~~~~ 133 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAF--------ADA--------LPEITTFGLDVSKVAIKAAAKRY---------------PQVT 133 (269)
T ss_dssp TCCEEEEETCTTSTTHHHH--------HHT--------CTTSEEEEEESCHHHHHHHHHHC---------------TTSE
T ss_pred CCCEEEEECCCCCHHHHHH--------HHh--------CCCCeEEEEeCCHHHHHHHHHhC---------------CCcE
Confidence 4679999999999998742 221 12368899998653222221111 1122
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
|.. +++..-.++++++|+++++.+ |.. |+.-
T Consensus 134 ~~~---~d~~~~~~~~~~fD~v~~~~~-------~~~---------------------------------------l~~~ 164 (269)
T 1p91_A 134 FCV---ASSHRLPFSDTSMDAIIRIYA-------PCK---------------------------------------AEEL 164 (269)
T ss_dssp EEE---CCTTSCSBCTTCEEEEEEESC-------CCC---------------------------------------HHHH
T ss_pred EEE---cchhhCCCCCCceeEEEEeCC-------hhh---------------------------------------HHHH
Confidence 333 355443478899999998644 221 2233
Q ss_pred HHHhccCceEEEEeecCC
Q 017747 210 SEELVVGGRMVLILLGRI 227 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~ 227 (366)
.+-|+|||++++...+.+
T Consensus 165 ~~~L~pgG~l~~~~~~~~ 182 (269)
T 1p91_A 165 ARVVKPGGWVITATPGPR 182 (269)
T ss_dssp HHHEEEEEEEEEEEECTT
T ss_pred HHhcCCCcEEEEEEcCHH
Confidence 788999999999987764
|
| >3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.88 E-value=3.3e-05 Score=70.83 Aligned_cols=122 Identities=17% Similarity=0.174 Sum_probs=66.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
+..+|+|+|||+|..++. +.+ ..|...++..|+.......+-+.+.. +......+ ..++
T Consensus 46 ~~~~vLDiGcG~G~~~~~--------la~--------~~p~~~v~GiDis~~~l~~A~~~~~~----l~~~~~~~-~~nv 104 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVE--------LSP--------LFPDTLILGLEIRVKVSDYVQDRIRA----LRAAPAGG-FQNI 104 (235)
T ss_dssp CCEEEEEETCTTCHHHHH--------HGG--------GSTTSEEEEEESCHHHHHHHHHHHHH----HHHSTTCC-CTTE
T ss_pred CCCeEEEEccCCcHHHHH--------HHH--------HCCCCeEEEEECCHHHHHHHHHHHHH----HHHHHhcC-CCeE
Confidence 457899999999999874 222 23558899999875433322211110 00000001 2233
Q ss_pred -EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
|+.+-...+....|+++++|.++..+.-.|..+... |.++ ....||+.
T Consensus 105 ~~~~~d~~~~l~~~~~~~~~D~v~~~~~dp~~k~~h~-----------krr~--------------------~~~~~l~~ 153 (235)
T 3ckk_A 105 ACLRSNAMKHLPNFFYKGQLTKMFFLFPDPHFKRTKH-----------KWRI--------------------ISPTLLAE 153 (235)
T ss_dssp EEEECCTTTCHHHHCCTTCEEEEEEESCC----------------------C--------------------CCHHHHHH
T ss_pred EEEECcHHHhhhhhCCCcCeeEEEEeCCCchhhhhhh-----------hhhh--------------------hhHHHHHH
Confidence 444322222234478999999998776666322100 0000 01346777
Q ss_pred HHHHhccCceEEEEe
Q 017747 209 RSEELVVGGRMVLIL 223 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~ 223 (366)
-++-|+|||+|++..
T Consensus 154 ~~~~LkpGG~l~~~t 168 (235)
T 3ckk_A 154 YAYVLRVGGLVYTIT 168 (235)
T ss_dssp HHHHEEEEEEEEEEE
T ss_pred HHHHCCCCCEEEEEe
Confidence 789999999999986
|
| >2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.87 E-value=4.9e-05 Score=66.22 Aligned_cols=118 Identities=13% Similarity=0.110 Sum_probs=67.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhh-hcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREI-LQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~-~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
...+|+|+|||+|..++.+ .+++... .....+..+|+..|+.... .++ .-
T Consensus 22 ~~~~vLDlGcG~G~~~~~l--------a~~~~~~~~~~~~~~~~v~~vD~s~~~------~~~---------------~~ 72 (196)
T 2nyu_A 22 PGLRVLDCGAAPGAWSQVA--------VQKVNAAGTDPSSPVGFVLGVDLLHIF------PLE---------------GA 72 (196)
T ss_dssp TTCEEEEETCCSCHHHHHH--------HHHTTTTCCCTTSCCCEEEEECSSCCC------CCT---------------TC
T ss_pred CCCEEEEeCCCCCHHHHHH--------HHHhccccccccCCCceEEEEechhcc------cCC---------------CC
Confidence 4579999999999998753 2321100 0001223689999986521 010 01
Q ss_pred eEEeccCCCccc--------ccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYG--------RLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQE 200 (366)
Q Consensus 129 ~f~~~vpgSFy~--------~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~ 200 (366)
.++ ..+++.. ..++++++|+++|..++||.-. ...+ . .....
T Consensus 73 ~~~--~~~d~~~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~---~~~~-----------------------~--~~~~~ 122 (196)
T 2nyu_A 73 TFL--CPADVTDPRTSQRILEVLPGRRADVILSDMAPNATGF---RDLD-----------------------H--DRLIS 122 (196)
T ss_dssp EEE--CSCCTTSHHHHHHHHHHSGGGCEEEEEECCCCCCCSC---HHHH-----------------------H--HHHHH
T ss_pred eEE--EeccCCCHHHHHHHHHhcCCCCCcEEEeCCCCCCCCC---cccC-----------------------H--HHHHH
Confidence 122 0233322 1256779999999877766321 0001 0 01123
Q ss_pred HHHHHHHHHHHHhccCceEEEEeecC
Q 017747 201 DFTLFLRSRSEELVVGGRMVLILLGR 226 (366)
Q Consensus 201 D~~~FL~~Ra~EL~~GG~lvl~~~g~ 226 (366)
....+|+.-.+-|+|||+|++..+..
T Consensus 123 ~~~~~l~~~~~~LkpgG~lv~~~~~~ 148 (196)
T 2nyu_A 123 LCLTLLSVTPDILQPGGTFLCKTWAG 148 (196)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred HHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 34567778889999999999987543
|
| >2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=97.86 E-value=2.4e-05 Score=69.49 Aligned_cols=83 Identities=11% Similarity=0.016 Sum_probs=48.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+. +.. .|..+++..|...+.....-+.+. ..+ ..++
T Consensus 77 ~~~~vLdiG~G~G~~~~~l~--------~~~-------~~~~~v~~vD~~~~~~~~a~~~~~--------~~~---~~~v 130 (215)
T 2yxe_A 77 PGMKVLEIGTGCGYHAAVTA--------EIV-------GEDGLVVSIERIPELAEKAERTLR--------KLG---YDNV 130 (215)
T ss_dssp TTCEEEEECCTTSHHHHHHH--------HHH-------CTTSEEEEEESCHHHHHHHHHHHH--------HHT---CTTE
T ss_pred CCCEEEEECCCccHHHHHHH--------HHh-------CCCCEEEEEeCCHHHHHHHHHHHH--------HcC---CCCe
Confidence 45799999999999987532 221 133688888976532222211111 111 1222
Q ss_pred -EEeccCCCcccccCCCCcccEEEccccccccc
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLS 161 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls 161 (366)
+.. +++...+.+++++|+++++.++|++.
T Consensus 131 ~~~~---~d~~~~~~~~~~fD~v~~~~~~~~~~ 160 (215)
T 2yxe_A 131 IVIV---GDGTLGYEPLAPYDRIYTTAAGPKIP 160 (215)
T ss_dssp EEEE---SCGGGCCGGGCCEEEEEESSBBSSCC
T ss_pred EEEE---CCcccCCCCCCCeeEEEECCchHHHH
Confidence 333 35533333377899999999999753
|
| >4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp} | Back alignment and structure |
|---|
Probab=97.85 E-value=1.3e-05 Score=70.52 Aligned_cols=133 Identities=13% Similarity=0.095 Sum_probs=63.7
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
....+|+|+|||+|..++.+ .+. .|..+++..|+.......+-+.+... +
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l--------~~~--------~~~~~v~~vD~~~~~~~~a~~~~~~~-------------~- 78 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSI--------ALA--------CPGVSVTAVDLSMDALAVARRNAERF-------------G- 78 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHH--------HHH--------CTTEEEEEEECC-----------------------------
T ss_pred CCCCEEEEecCCHhHHHHHH--------HHh--------CCCCeEEEEECCHHHHHHHHHHHHHh-------------C-
Confidence 45689999999999988753 232 23478999999664433332222110 0
Q ss_pred eEEeccCCCcccccCCC-----CcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPN-----NSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFT 203 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~-----~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~ 203 (366)
.-+..+.+++.+ .+++ +++|+++++-.+++.........+.. .+... ..... .......+.
T Consensus 79 ~~~~~~~~d~~~-~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~--~~~~~-~~~~~----------~~~~~~~~~ 144 (215)
T 4dzr_A 79 AVVDWAAADGIE-WLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVR--DYEPR-LALDG----------GEDGLQFYR 144 (215)
T ss_dssp ----CCHHHHHH-HHHHHHHTTCCBSEEEECCCCCC-------------------------------------CTTHHHH
T ss_pred CceEEEEcchHh-hhhhhhhccCcccEEEECCCCCCCccccccChhhh--ccCcc-ccccC----------CCcHHHHHH
Confidence 011223345555 5555 89999999877666443221100000 00000 00000 000123346
Q ss_pred HHHHHHHHHhccCceEEEEeec
Q 017747 204 LFLRSRSEELVVGGRMVLILLG 225 (366)
Q Consensus 204 ~FL~~Ra~EL~~GG~lvl~~~g 225 (366)
.||+.-.+-|+|||++++...+
T Consensus 145 ~~l~~~~~~LkpgG~l~~~~~~ 166 (215)
T 4dzr_A 145 RMAALPPYVLARGRAGVFLEVG 166 (215)
T ss_dssp HHHTCCGGGBCSSSEEEEEECT
T ss_pred HHHHHHHHHhcCCCeEEEEEEC
Confidence 7888889999999995444443
|
| >3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E* | Back alignment and structure |
|---|
Probab=97.84 E-value=6.3e-06 Score=75.95 Aligned_cols=63 Identities=13% Similarity=0.075 Sum_probs=41.9
Q ss_pred hHHHhhHHHHHHHHHHHHHHHHHHHHhhhhcCCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEec
Q 017747 17 SYARNSSLQKKASDTVKHITLEALQQLYLEIDPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLN 96 (366)
Q Consensus 17 sY~~nS~~Q~~~~~~~~~~l~~ai~~l~~~~~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~n 96 (366)
.|+.....|.+....++..|+. + ......+|+|+|||+|..|..+...+ .|.-+|+..
T Consensus 50 ~yr~w~~~~skla~~ll~~l~~----~---~l~~g~~VLDlG~GtG~~t~~la~~v---------------~~~G~V~av 107 (232)
T 3id6_C 50 EYREWNAFRSKLAGAILKGLKT----N---PIRKGTKVLYLGAASGTTISHVSDII---------------ELNGKAYGV 107 (232)
T ss_dssp EEEECCTTTCHHHHHHHTTCSC----C---SCCTTCEEEEETCTTSHHHHHHHHHH---------------TTTSEEEEE
T ss_pred chhhhchHHHHHHHHHHhhhhh----c---CCCCCCEEEEEeecCCHHHHHHHHHh---------------CCCCEEEEE
Confidence 4777788888887665543321 1 11235899999999999887533222 234689999
Q ss_pred CCCCC
Q 017747 97 DLPTN 101 (366)
Q Consensus 97 DLp~N 101 (366)
|+...
T Consensus 108 D~s~~ 112 (232)
T 3id6_C 108 EFSPR 112 (232)
T ss_dssp ECCHH
T ss_pred ECcHH
Confidence 98654
|
| >2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A* | Back alignment and structure |
|---|
Probab=97.84 E-value=9.4e-05 Score=68.79 Aligned_cols=125 Identities=15% Similarity=0.184 Sum_probs=71.1
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++.+ .+. .|..+++..|........+-+.. . ..+ ..++
T Consensus 109 ~~~~vLDlG~GsG~~~~~l--------a~~--------~~~~~v~~vD~s~~~l~~a~~n~-------~-~~~---~~~v 161 (276)
T 2b3t_A 109 QPCRILDLGTGTGAIALAL--------ASE--------RPDCEIIAVDRMPDAVSLAQRNA-------Q-HLA---IKNI 161 (276)
T ss_dssp SCCEEEEETCTTSHHHHHH--------HHH--------CTTSEEEEECSSHHHHHHHHHHH-------H-HHT---CCSE
T ss_pred CCCEEEEecCCccHHHHHH--------HHh--------CCCCEEEEEECCHHHHHHHHHHH-------H-HcC---CCce
Confidence 3579999999999988753 222 23478999998653222221111 1 111 1222
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCC---cccc-cccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPP---TLYN-EMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLF 205 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~---~~~~-~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~F 205 (366)
- .+.+++.+ .+|++++|+++|+-..+|... +. .+.. +...++..| ...-.++..+
T Consensus 162 ~--~~~~d~~~-~~~~~~fD~Iv~npPy~~~~~-~~l~~~v~~~~p~~al~~~-----------------~~g~~~~~~~ 220 (276)
T 2b3t_A 162 H--ILQSDWFS-ALAGQQFAMIVSNPPYIDEQD-PHLQQGDVRFEPLTALVAA-----------------DSGMADIVHI 220 (276)
T ss_dssp E--EECCSTTG-GGTTCCEEEEEECCCCBCTTC-HHHHSSGGGSSCSTTTBCH-----------------HHHTHHHHHH
T ss_pred E--EEEcchhh-hcccCCccEEEECCCCCCccc-cccChhhhhcCcHHHHcCC-----------------CcHHHHHHHH
Confidence 1 22346654 356789999999977776543 11 0000 000000000 0112456788
Q ss_pred HHHHHHHhccCceEEEE
Q 017747 206 LRSRSEELVVGGRMVLI 222 (366)
Q Consensus 206 L~~Ra~EL~~GG~lvl~ 222 (366)
++.-.+-|+|||++++.
T Consensus 221 l~~~~~~LkpgG~l~~~ 237 (276)
T 2b3t_A 221 IEQSRNALVSGGFLLLE 237 (276)
T ss_dssp HHHHGGGEEEEEEEEEE
T ss_pred HHHHHHhcCCCCEEEEE
Confidence 88889999999999997
|
| >1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7 | Back alignment and structure |
|---|
Probab=97.84 E-value=1.9e-05 Score=70.91 Aligned_cols=77 Identities=14% Similarity=0.023 Sum_probs=46.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+ .+. + .+++..|........+-+.+. . .+++
T Consensus 70 ~~~~vLdiG~G~G~~~~~l--------~~~-----~-----~~v~~vD~~~~~~~~a~~~~~-----------~--~~~v 118 (231)
T 1vbf_A 70 KGQKVLEIGTGIGYYTALI--------AEI-----V-----DKVVSVEINEKMYNYASKLLS-----------Y--YNNI 118 (231)
T ss_dssp TTCEEEEECCTTSHHHHHH--------HHH-----S-----SEEEEEESCHHHHHHHHHHHT-----------T--CSSE
T ss_pred CCCEEEEEcCCCCHHHHHH--------HHH-----c-----CEEEEEeCCHHHHHHHHHHHh-----------h--cCCe
Confidence 4579999999999998753 222 1 567888875432222111111 1 1122
Q ss_pred -EEeccCCCcccccCCCCcccEEEcccccccc
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWL 160 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S~~alhWl 160 (366)
++. +++.+.+.+++++|++++..++|++
T Consensus 119 ~~~~---~d~~~~~~~~~~fD~v~~~~~~~~~ 147 (231)
T 1vbf_A 119 KLIL---GDGTLGYEEEKPYDRVVVWATAPTL 147 (231)
T ss_dssp EEEE---SCGGGCCGGGCCEEEEEESSBBSSC
T ss_pred EEEE---CCcccccccCCCccEEEECCcHHHH
Confidence 333 4555534457899999999999875
|
| >3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.82 E-value=4.4e-06 Score=74.95 Aligned_cols=102 Identities=10% Similarity=0.070 Sum_probs=60.8
Q ss_pred HHHHHHHHHhhhhcCCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchh
Q 017747 34 HITLEALQQLYLEIDPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDF 113 (366)
Q Consensus 34 ~~l~~ai~~l~~~~~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~ 113 (366)
|.+++--.....- .+.+.+|+|+|||+|+.++.+ . ...|..+++..|.....-.-.-+.+
T Consensus 34 p~ld~fY~~~~~~-l~~~~~VLDlGCG~GplAl~l--------~--------~~~p~a~~~A~Di~~~~leiar~~~--- 93 (200)
T 3fzg_A 34 ATLNDFYTYVFGN-IKHVSSILDFGCGFNPLALYQ--------W--------NENEKIIYHAYDIDRAEIAFLSSII--- 93 (200)
T ss_dssp GGHHHHHHHHHHH-SCCCSEEEEETCTTHHHHHHH--------H--------CSSCCCEEEEECSCHHHHHHHHHHH---
T ss_pred HhHHHHHHHHHhh-cCCCCeEEEecCCCCHHHHHH--------H--------hcCCCCEEEEEeCCHHHHHHHHHHH---
Confidence 5555443332221 345889999999999998752 1 2356689999998653222221111
Q ss_pred HHHHhhhcCCCCCCceEEeccCCCcccccCCCCcccEEEcccccccccCCCCcc
Q 017747 114 HRQLRNERGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTL 167 (366)
Q Consensus 114 ~~~~~~~~~~~~~~~~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~ 167 (366)
...|. ..++-+. +.-.. .|++++|++.++..+|-|.+.+..+
T Consensus 94 -----~~~g~--~~~v~~~----d~~~~-~~~~~~DvVLa~k~LHlL~~~~~al 135 (200)
T 3fzg_A 94 -----GKLKT--TIKYRFL----NKESD-VYKGTYDVVFLLKMLPVLKQQDVNI 135 (200)
T ss_dssp -----HHSCC--SSEEEEE----CCHHH-HTTSEEEEEEEETCHHHHHHTTCCH
T ss_pred -----HhcCC--CccEEEe----ccccc-CCCCCcChhhHhhHHHhhhhhHHHH
Confidence 11121 1133232 33233 6889999999999999996655443
|
| >3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A* | Back alignment and structure |
|---|
Probab=97.82 E-value=4.4e-05 Score=69.72 Aligned_cols=108 Identities=12% Similarity=0.102 Sum_probs=60.5
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+...+|||+|||+|.++.. +.+ ..| -+++.-|+.......+-+... . . ..+
T Consensus 59 ~~G~rVLdiG~G~G~~~~~--------~~~--------~~~-~~v~~id~~~~~~~~a~~~~~-------~-~----~~~ 109 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASK--------VQE--------API-DEHWIIECNDGVFQRLRDWAP-------R-Q----THK 109 (236)
T ss_dssp TTCEEEEEECCTTSHHHHH--------HTT--------SCE-EEEEEEECCHHHHHHHHHHGG-------G-C----SSE
T ss_pred cCCCeEEEECCCccHHHHH--------HHH--------hCC-cEEEEEeCCHHHHHHHHHHHh-------h-C----CCc
Confidence 3468999999999998764 211 134 567888886532222211110 0 0 112
Q ss_pred e-EEeccCCCccc--ccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYG--RLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLF 205 (366)
Q Consensus 129 ~-f~~~vpgSFy~--~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~F 205 (366)
+ ++. ++... .-+|++++|.++.-........ .. ..|...|
T Consensus 110 ~~~~~---~~a~~~~~~~~~~~FD~i~~D~~~~~~~~--~~--------------------------------~~~~~~~ 152 (236)
T 3orh_A 110 VIPLK---GLWEDVAPTLPDGHFDGILYDTYPLSEET--WH--------------------------------THQFNFI 152 (236)
T ss_dssp EEEEE---SCHHHHGGGSCTTCEEEEEECCCCCBGGG--TT--------------------------------THHHHHH
T ss_pred eEEEe---ehHHhhcccccccCCceEEEeeeecccch--hh--------------------------------hcchhhh
Confidence 2 222 33322 2378999999864221111000 00 1356667
Q ss_pred HHHHHHHhccCceEEEE
Q 017747 206 LRSRSEELVVGGRMVLI 222 (366)
Q Consensus 206 L~~Ra~EL~~GG~lvl~ 222 (366)
|+.-++-|||||+|++.
T Consensus 153 ~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 153 KNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp HHTHHHHEEEEEEEEEC
T ss_pred hhhhhheeCCCCEEEEE
Confidence 77889999999999764
|
| >4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.81 E-value=1.2e-05 Score=78.95 Aligned_cols=111 Identities=12% Similarity=0.135 Sum_probs=65.4
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce-
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV- 129 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~- 129 (366)
..+|+|+|||+|..++.+ .++ .|..+|+..|.........-+.+. . ++..+..++
T Consensus 223 ~~~VLDlGcG~G~~s~~l--------a~~--------~p~~~V~gvD~s~~al~~Ar~n~~-------~-ngl~~~~~v~ 278 (375)
T 4dcm_A 223 EGEIVDLGCGNGVIGLTL--------LDK--------NPQAKVVFVDESPMAVASSRLNVE-------T-NMPEALDRCE 278 (375)
T ss_dssp CSEEEEETCTTCHHHHHH--------HHH--------CTTCEEEEEESCHHHHHHHHHHHH-------H-HCGGGGGGEE
T ss_pred CCeEEEEeCcchHHHHHH--------HHH--------CCCCEEEEEECcHHHHHHHHHHHH-------H-cCCCcCceEE
Confidence 379999999999998753 232 244889999986432222222111 1 110000122
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
|.. +++++ .+|++++|+++++-.+|+...++... ...||+.-
T Consensus 279 ~~~---~D~~~-~~~~~~fD~Ii~nppfh~~~~~~~~~----------------------------------~~~~l~~~ 320 (375)
T 4dcm_A 279 FMI---NNALS-GVEPFRFNAVLCNPPFHQQHALTDNV----------------------------------AWEMFHHA 320 (375)
T ss_dssp EEE---CSTTT-TCCTTCEEEEEECCCC-------CCH----------------------------------HHHHHHHH
T ss_pred EEe---chhhc-cCCCCCeeEEEECCCcccCcccCHHH----------------------------------HHHHHHHH
Confidence 233 45555 56888999999999998854433221 12467777
Q ss_pred HHHhccCceEEEEe
Q 017747 210 SEELVVGGRMVLIL 223 (366)
Q Consensus 210 a~EL~~GG~lvl~~ 223 (366)
.+-|+|||+++++.
T Consensus 321 ~~~LkpgG~l~iv~ 334 (375)
T 4dcm_A 321 RRCLKINGELYIVA 334 (375)
T ss_dssp HHHEEEEEEEEEEE
T ss_pred HHhCCCCcEEEEEE
Confidence 88999999999975
|
| >3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=97.80 E-value=9e-05 Score=64.64 Aligned_cols=110 Identities=11% Similarity=0.063 Sum_probs=67.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++.++ . .+..+|+..|+.......+-+.+. . .+ ..++
T Consensus 44 ~~~~vLDlgcG~G~~~~~~~--------~---------~~~~~v~~vD~~~~~~~~a~~~~~-------~-~~---~~~v 95 (189)
T 3p9n_A 44 TGLAVLDLYAGSGALGLEAL--------S---------RGAASVLFVESDQRSAAVIARNIE-------A-LG---LSGA 95 (189)
T ss_dssp TTCEEEEETCTTCHHHHHHH--------H---------TTCSEEEEEECCHHHHHHHHHHHH-------H-HT---CSCE
T ss_pred CCCEEEEeCCCcCHHHHHHH--------H---------CCCCeEEEEECCHHHHHHHHHHHH-------H-cC---CCce
Confidence 45789999999999987421 1 112579999986543332222111 1 11 1122
Q ss_pred -EEeccCCCccccc--CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRL--FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 130 -f~~~vpgSFy~~l--fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
++. +++.+-+ ++++++|++++...+||.. .++..+|
T Consensus 96 ~~~~---~d~~~~~~~~~~~~fD~i~~~~p~~~~~--------------------------------------~~~~~~l 134 (189)
T 3p9n_A 96 TLRR---GAVAAVVAAGTTSPVDLVLADPPYNVDS--------------------------------------ADVDAIL 134 (189)
T ss_dssp EEEE---SCHHHHHHHCCSSCCSEEEECCCTTSCH--------------------------------------HHHHHHH
T ss_pred EEEE---ccHHHHHhhccCCCccEEEECCCCCcch--------------------------------------hhHHHHH
Confidence 344 4554433 4688999999987666631 2333445
Q ss_pred HHHHH--HhccCceEEEEeecCCC
Q 017747 207 RSRSE--ELVVGGRMVLILLGRIG 228 (366)
Q Consensus 207 ~~Ra~--EL~~GG~lvl~~~g~~~ 228 (366)
....+ -|+|||++++....+..
T Consensus 135 ~~~~~~~~L~pgG~l~~~~~~~~~ 158 (189)
T 3p9n_A 135 AALGTNGWTREGTVAVVERATTCA 158 (189)
T ss_dssp HHHHHSSSCCTTCEEEEEEETTSC
T ss_pred HHHHhcCccCCCeEEEEEecCCCC
Confidence 55555 89999999998876644
|
| >2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.75 E-value=7.1e-06 Score=79.27 Aligned_cols=108 Identities=16% Similarity=0.264 Sum_probs=69.0
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceE
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVY 130 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 130 (366)
..+|+|+|||+|..++. +.+. .|..+++..|+........-+.+ .. .+ ....+
T Consensus 197 ~~~VLDlGcG~G~~~~~--------la~~--------~~~~~v~~vD~s~~~l~~a~~~~-------~~-~~---~~~~~ 249 (343)
T 2pjd_A 197 KGKVLDVGCGAGVLSVA--------FARH--------SPKIRLTLCDVSAPAVEASRATL-------AA-NG---VEGEV 249 (343)
T ss_dssp CSBCCBTTCTTSHHHHH--------HHHH--------CTTCBCEEEESBHHHHHHHHHHH-------HH-TT---CCCEE
T ss_pred CCeEEEecCccCHHHHH--------HHHH--------CCCCEEEEEECCHHHHHHHHHHH-------HH-hC---CCCEE
Confidence 45899999999999875 2232 23478999998643222221111 11 11 11222
Q ss_pred EeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 017747 131 IAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRS 210 (366)
Q Consensus 131 ~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra 210 (366)
. .++++. ++++++|+++++..+||... ....+...||+.-.
T Consensus 250 ~---~~d~~~--~~~~~fD~Iv~~~~~~~g~~----------------------------------~~~~~~~~~l~~~~ 290 (343)
T 2pjd_A 250 F---ASNVFS--EVKGRFDMIISNPPFHDGMQ----------------------------------TSLDAAQTLIRGAV 290 (343)
T ss_dssp E---ECSTTT--TCCSCEEEEEECCCCCSSSH----------------------------------HHHHHHHHHHHHHG
T ss_pred E---Eccccc--cccCCeeEEEECCCcccCcc----------------------------------CCHHHHHHHHHHHH
Confidence 2 345544 34789999999999997321 01245678889999
Q ss_pred HHhccCceEEEEee
Q 017747 211 EELVVGGRMVLILL 224 (366)
Q Consensus 211 ~EL~~GG~lvl~~~ 224 (366)
+-|+|||++++...
T Consensus 291 ~~LkpgG~l~i~~~ 304 (343)
T 2pjd_A 291 RHLNSGGELRIVAN 304 (343)
T ss_dssp GGEEEEEEEEEEEE
T ss_pred HhCCCCcEEEEEEc
Confidence 99999999999753
|
| >2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=97.74 E-value=1.9e-05 Score=70.91 Aligned_cols=87 Identities=14% Similarity=0.002 Sum_probs=49.4
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcC-----CC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERG-----GG 124 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~-----~~ 124 (366)
...+|+|+|||+|..+..+ .+.... ...|..+|+..|.........-+.+. . .+ .
T Consensus 80 ~~~~VLdiG~G~G~~~~~l--------a~~~~~---~~~~~~~v~~vD~~~~~~~~a~~~~~-------~-~~~~~~~~- 139 (227)
T 2pbf_A 80 PGSRAIDVGSGSGYLTVCM--------AIKMNV---LENKNSYVIGLERVKDLVNFSLENIK-------R-DKPELLKI- 139 (227)
T ss_dssp TTCEEEEESCTTSHHHHHH--------HHHTTT---TTCTTCEEEEEESCHHHHHHHHHHHH-------H-HCGGGGSS-
T ss_pred CCCEEEEECCCCCHHHHHH--------HHHhcc---cCCCCCEEEEEeCCHHHHHHHHHHHH-------H-cCcccccc-
Confidence 3579999999999988753 222110 01244789999986532222221111 1 11 0
Q ss_pred CCCceEEeccCCCccccc----CCCCcccEEEcccccccc
Q 017747 125 SSPSVYIAGYPGSFYGRL----FPNNSLHFIHSSNSLHWL 160 (366)
Q Consensus 125 ~~~~~f~~~vpgSFy~~l----fp~~s~~~~~S~~alhWl 160 (366)
.+-.+.. ++..+.+ ++.+++|++++..++|++
T Consensus 140 -~~v~~~~---~d~~~~~~~~~~~~~~fD~I~~~~~~~~~ 175 (227)
T 2pbf_A 140 -DNFKIIH---KNIYQVNEEEKKELGLFDAIHVGASASEL 175 (227)
T ss_dssp -TTEEEEE---CCGGGCCHHHHHHHCCEEEEEECSBBSSC
T ss_pred -CCEEEEE---CChHhcccccCccCCCcCEEEECCchHHH
Confidence 1122333 3554444 556789999999998863
|
| >1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3 | Back alignment and structure |
|---|
Probab=97.74 E-value=0.0001 Score=66.15 Aligned_cols=36 Identities=17% Similarity=0.171 Sum_probs=25.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTN 101 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~N 101 (366)
...+|+|+|||+|..+..+ .+.. . ..+|+..|+...
T Consensus 57 ~g~~VLDlGcGtG~~~~~l--------a~~~-------~-~~~V~gvD~s~~ 92 (210)
T 1nt2_A 57 GDERVLYLGAASGTTVSHL--------ADIV-------D-EGIIYAVEYSAK 92 (210)
T ss_dssp SSCEEEEETCTTSHHHHHH--------HHHT-------T-TSEEEEECCCHH
T ss_pred CCCEEEEECCcCCHHHHHH--------HHHc-------C-CCEEEEEECCHH
Confidence 3579999999999988753 2221 1 268999998653
|
| >3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A* | Back alignment and structure |
|---|
Probab=97.69 E-value=0.00014 Score=69.14 Aligned_cols=114 Identities=16% Similarity=0.144 Sum_probs=65.3
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+++.+|+|+|||+|..+..+ .+ ..+..+++..|+........-+.++.+.... . .++
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l--------~~--------~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~----~---~~~ 150 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREV--------LR--------HGTVEHCDLVDIDGEVMEQSKQHFPQISRSL----A---DPR 150 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHH--------HT--------CTTCCEEEEEESCHHHHHHHHHHCHHHHGGG----G---CTT
T ss_pred CCCCeEEEEcCCCCHHHHHH--------Hh--------CCCCCEEEEEECCHHHHHHHHHHhHHhhccc----C---CCc
Confidence 45689999999999988642 11 1234689999986544333333332211110 0 122
Q ss_pred e-EEeccCCCcccccC--CCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYGRLF--PNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLF 205 (366)
Q Consensus 129 ~-f~~~vpgSFy~~lf--p~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~F 205 (366)
+ ++. ++..+-+. +++++|++++....++.. +..+.. ..|
T Consensus 151 v~~~~---~D~~~~~~~~~~~~fDvIi~d~~~~~~~--~~~l~~---------------------------------~~~ 192 (304)
T 3bwc_A 151 ATVRV---GDGLAFVRQTPDNTYDVVIIDTTDPAGP--ASKLFG---------------------------------EAF 192 (304)
T ss_dssp EEEEE---SCHHHHHHSSCTTCEEEEEEECC-----------CC---------------------------------HHH
T ss_pred EEEEE---CcHHHHHHhccCCceeEEEECCCCcccc--chhhhH---------------------------------HHH
Confidence 2 333 35443333 688999999976665521 111100 346
Q ss_pred HHHHHHHhccCceEEEEe
Q 017747 206 LRSRSEELVVGGRMVLIL 223 (366)
Q Consensus 206 L~~Ra~EL~~GG~lvl~~ 223 (366)
|+.-.+-|+|||+|++..
T Consensus 193 l~~~~~~LkpgG~lv~~~ 210 (304)
T 3bwc_A 193 YKDVLRILKPDGICCNQG 210 (304)
T ss_dssp HHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHhcCCCcEEEEec
Confidence 677789999999999985
|
| >1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A* | Back alignment and structure |
|---|
Probab=97.68 E-value=0.0001 Score=66.01 Aligned_cols=87 Identities=10% Similarity=-0.049 Sum_probs=46.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+. +.. .+..+|+..|+.......+-+.+... ... ..+. ..-.
T Consensus 77 ~~~~vLDiG~G~G~~~~~la--------~~~-------~~~~~v~~vD~s~~~~~~a~~~~~~~--~~~-~~~~--~~v~ 136 (226)
T 1i1n_A 77 EGAKALDVGSGSGILTACFA--------RMV-------GCTGKVIGIDHIKELVDDSVNNVRKD--DPT-LLSS--GRVQ 136 (226)
T ss_dssp TTCEEEEETCTTSHHHHHHH--------HHH-------CTTCEEEEEESCHHHHHHHHHHHHHH--CTH-HHHT--SSEE
T ss_pred CCCEEEEEcCCcCHHHHHHH--------HHh-------CCCcEEEEEeCCHHHHHHHHHHHHhh--ccc-ccCC--CcEE
Confidence 45799999999999987532 221 13368899998653322222211100 000 0000 1112
Q ss_pred EEeccCCCcccccCCCCcccEEEccccccc
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHW 159 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhW 159 (366)
+.. ++......+++++|++++...++.
T Consensus 137 ~~~---~d~~~~~~~~~~fD~i~~~~~~~~ 163 (226)
T 1i1n_A 137 LVV---GDGRMGYAEEAPYDAIHVGAAAPV 163 (226)
T ss_dssp EEE---SCGGGCCGGGCCEEEEEECSBBSS
T ss_pred EEE---CCcccCcccCCCcCEEEECCchHH
Confidence 333 344433445778999998877643
|
| >1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1 | Back alignment and structure |
|---|
Probab=97.66 E-value=3.5e-05 Score=73.48 Aligned_cols=82 Identities=11% Similarity=0.129 Sum_probs=49.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++.+. +.. ....+|+..|+..+.....-+.+ ...| ..++
T Consensus 75 ~~~~VLDiGcG~G~~~~~la--------~~~-------~~~~~v~gvD~s~~~~~~a~~~~--------~~~g---~~~v 128 (317)
T 1dl5_A 75 KGMRVLEIGGGTGYNAAVMS--------RVV-------GEKGLVVSVEYSRKICEIAKRNV--------ERLG---IENV 128 (317)
T ss_dssp TTCEEEEECCTTSHHHHHHH--------HHH-------CTTCEEEEEESCHHHHHHHHHHH--------HHTT---CCSE
T ss_pred CcCEEEEecCCchHHHHHHH--------Hhc-------CCCCEEEEEECCHHHHHHHHHHH--------HHcC---CCCe
Confidence 35799999999999887532 221 11267899998653322221111 1111 1232
Q ss_pred -EEeccCCCcccccCCCCcccEEEcccccccc
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWL 160 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S~~alhWl 160 (366)
+.. +++.+.+.+.+++|++++...+|++
T Consensus 129 ~~~~---~d~~~~~~~~~~fD~Iv~~~~~~~~ 157 (317)
T 1dl5_A 129 IFVC---GDGYYGVPEFSPYDVIFVTVGVDEV 157 (317)
T ss_dssp EEEE---SCGGGCCGGGCCEEEEEECSBBSCC
T ss_pred EEEE---CChhhccccCCCeEEEEEcCCHHHH
Confidence 333 4665545567899999999999875
|
| >3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A* | Back alignment and structure |
|---|
Probab=97.66 E-value=6.5e-06 Score=74.66 Aligned_cols=84 Identities=15% Similarity=0.118 Sum_probs=52.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++.+ .+. ..+|+..|+.......+-+.+. ..+. ..++
T Consensus 78 ~~~~vLD~gcG~G~~~~~l--------a~~----------~~~v~~vD~s~~~~~~a~~~~~--------~~~~--~~~~ 129 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQF--------ALT----------GMRVIAIDIDPVKIALARNNAE--------VYGI--ADKI 129 (241)
T ss_dssp CCSEEEETTCTTSHHHHHH--------HHT----------TCEEEEEESCHHHHHHHHHHHH--------HTTC--GGGE
T ss_pred CCCEEEECccccCHHHHHH--------HHc----------CCEEEEEECCHHHHHHHHHHHH--------HcCC--CcCe
Confidence 4579999999999999753 221 1788999986543333222111 1111 0122
Q ss_pred -EEeccCCCcccccCCCCcccEEEcccccccccCCCC
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPP 165 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~ 165 (366)
|+. +++.+- .+++++|+++++..+||......
T Consensus 130 ~~~~---~d~~~~-~~~~~~D~v~~~~~~~~~~~~~~ 162 (241)
T 3gdh_A 130 EFIC---GDFLLL-ASFLKADVVFLSPPWGGPDYATA 162 (241)
T ss_dssp EEEE---SCHHHH-GGGCCCSEEEECCCCSSGGGGGS
T ss_pred EEEE---CChHHh-cccCCCCEEEECCCcCCcchhhh
Confidence 333 466443 37889999999999999776544
|
| >1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20 | Back alignment and structure |
|---|
Probab=97.65 E-value=8.1e-05 Score=65.52 Aligned_cols=100 Identities=13% Similarity=0.085 Sum_probs=60.4
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceE
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVY 130 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 130 (366)
..+|+|+|||+|..+..+ .+. .|..+++..|........+-+.+. ..+ ..++
T Consensus 66 ~~~vLDiG~G~G~~~~~l--------~~~--------~~~~~v~~vD~s~~~~~~a~~~~~--------~~~---~~~v- 117 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPL--------SIV--------RPEAHFTLLDSLGKRVRFLRQVQH--------ELK---LENI- 117 (207)
T ss_dssp SSEEEEETCTTTTTHHHH--------HHH--------CTTSEEEEEESCHHHHHHHHHHHH--------HTT---CSSE-
T ss_pred CCeEEEECCCCCHHHHHH--------HHH--------CCCCEEEEEeCCHHHHHHHHHHHH--------HcC---CCCe-
Confidence 469999999999998753 222 234789999986532222211111 111 1222
Q ss_pred EeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 017747 131 IAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRS 210 (366)
Q Consensus 131 ~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra 210 (366)
..+.+++.+ +.|++++|++++... .++..+|+.-.
T Consensus 118 -~~~~~d~~~-~~~~~~~D~i~~~~~-------------------------------------------~~~~~~l~~~~ 152 (207)
T 1jsx_A 118 -EPVQSRVEE-FPSEPPFDGVISRAF-------------------------------------------ASLNDMVSWCH 152 (207)
T ss_dssp -EEEECCTTT-SCCCSCEEEEECSCS-------------------------------------------SSHHHHHHHHT
T ss_pred -EEEecchhh-CCccCCcCEEEEecc-------------------------------------------CCHHHHHHHHH
Confidence 122345533 346789999997420 02335667778
Q ss_pred HHhccCceEEEEe
Q 017747 211 EELVVGGRMVLIL 223 (366)
Q Consensus 211 ~EL~~GG~lvl~~ 223 (366)
+-|+|||++++..
T Consensus 153 ~~L~~gG~l~~~~ 165 (207)
T 1jsx_A 153 HLPGEQGRFYALK 165 (207)
T ss_dssp TSEEEEEEEEEEE
T ss_pred HhcCCCcEEEEEe
Confidence 8999999999974
|
| >1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7 | Back alignment and structure |
|---|
Probab=97.65 E-value=8.7e-05 Score=66.76 Aligned_cols=92 Identities=13% Similarity=0.094 Sum_probs=49.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+.... .. ....+..+|+..|.........-+.+......... . .+-.
T Consensus 84 ~~~~VLdiG~G~G~~~~~la~~~--------~~--~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~----~~v~ 148 (227)
T 1r18_A 84 PGARILDVGSGSGYLTACFYRYI--------KA--KGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLD-S----GQLL 148 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH--------HH--SCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHH-H----TSEE
T ss_pred CCCEEEEECCCccHHHHHHHHhc--------cc--ccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccC-C----CceE
Confidence 34799999999999987543221 10 00122358899998653333222222110000000 0 1112
Q ss_pred EEeccCCCcccccCCC-CcccEEEcccccccc
Q 017747 130 YIAGYPGSFYGRLFPN-NSLHFIHSSNSLHWL 160 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~-~s~~~~~S~~alhWl 160 (366)
+.. ++... .+|+ +++|++++..++|++
T Consensus 149 ~~~---~d~~~-~~~~~~~fD~I~~~~~~~~~ 176 (227)
T 1r18_A 149 IVE---GDGRK-GYPPNAPYNAIHVGAAAPDT 176 (227)
T ss_dssp EEE---SCGGG-CCGGGCSEEEEEECSCBSSC
T ss_pred EEE---CCccc-CCCcCCCccEEEECCchHHH
Confidence 333 35544 4455 789999999999874
|
| >1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A | Back alignment and structure |
|---|
Probab=97.64 E-value=0.00018 Score=65.75 Aligned_cols=43 Identities=12% Similarity=0.054 Sum_probs=28.9
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHH
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSV 106 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~l 106 (366)
...+|+|+|||+|..++.+...+ . .+..+|+..|+........
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~---------~-----~~~~~v~gvDis~~~l~~A 93 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLH---------R-----RSLRQVIASDVDPAPLELA 93 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHT---------G-----GGEEEEEEEESCHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHh---------c-----cCCCeEEEEECCHHHHHHH
Confidence 46899999999998877533221 0 1237899999865444433
|
| >3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.62 E-value=7e-05 Score=69.02 Aligned_cols=125 Identities=10% Similarity=0.069 Sum_probs=67.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++.+ .+ ..+ .+|+..|+.......+-+.+. ..+. ..++
T Consensus 49 ~~~~vLDlG~G~G~~~~~l--------a~--------~~~-~~v~gvDi~~~~~~~a~~n~~--------~~~~--~~~v 101 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLL--------ST--------RTK-AKIVGVEIQERLADMAKRSVA--------YNQL--EDQI 101 (259)
T ss_dssp SCCEEEETTCTTTHHHHHH--------HT--------TCC-CEEEEECCSHHHHHHHHHHHH--------HTTC--TTTE
T ss_pred CCCEEEEcCCchhHHHHHH--------HH--------hcC-CcEEEEECCHHHHHHHHHHHH--------HCCC--cccE
Confidence 4689999999999988742 22 123 389999986543332222111 1111 1122
Q ss_pred -EEeccCCCccccc--CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRL--FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 130 -f~~~vpgSFy~~l--fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
++. +++.+-. ++++++|+++|+-.++..... .... +......-......++..||
T Consensus 102 ~~~~---~D~~~~~~~~~~~~fD~Ii~npPy~~~~~~--~~~~-----------------~~~~~~~a~~~~~~~~~~~l 159 (259)
T 3lpm_A 102 EIIE---YDLKKITDLIPKERADIVTCNPPYFATPDT--SLKN-----------------TNEHFRIARHEVMCTLEDTI 159 (259)
T ss_dssp EEEC---SCGGGGGGTSCTTCEEEEEECCCC------------------------------------------HHHHHHH
T ss_pred EEEE---CcHHHhhhhhccCCccEEEECCCCCCCccc--cCCC-----------------CchHHHhhhccccCCHHHHH
Confidence 333 4554333 678999999997544332110 0000 00000000111246788999
Q ss_pred HHHHHHhccCceEEEEe
Q 017747 207 RSRSEELVVGGRMVLIL 223 (366)
Q Consensus 207 ~~Ra~EL~~GG~lvl~~ 223 (366)
+.-.+-|+|||+|++..
T Consensus 160 ~~~~~~LkpgG~l~~~~ 176 (259)
T 3lpm_A 160 RVAASLLKQGGKANFVH 176 (259)
T ss_dssp HHHHHHEEEEEEEEEEE
T ss_pred HHHHHHccCCcEEEEEE
Confidence 99999999999999965
|
| >3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A* | Back alignment and structure |
|---|
Probab=97.62 E-value=6.3e-05 Score=74.94 Aligned_cols=112 Identities=18% Similarity=0.180 Sum_probs=64.1
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++.+ ... .+.-+++.-|+..+...-.-+....+.... ...|.. ..++
T Consensus 173 ~gd~VLDLGCGtG~l~l~l--------A~~--------~g~~kVvGIDiS~~~lelAr~n~e~frkr~-~~~Gl~-~~rV 234 (438)
T 3uwp_A 173 DDDLFVDLGSGVGQVVLQV--------AAA--------TNCKHHYGVEKADIPAKYAETMDREFRKWM-KWYGKK-HAEY 234 (438)
T ss_dssp TTCEEEEESCTTSHHHHHH--------HHH--------CCCSEEEEEECCHHHHHHHHHHHHHHHHHH-HHHTBC-CCEE
T ss_pred CCCEEEEeCCCCCHHHHHH--------HHH--------CCCCEEEEEeCCHHHHHHHHHHHHHHHHHH-HHhCCC-CCCe
Confidence 4578999999999998753 221 122468999986543222221111111101 111210 1233
Q ss_pred -EEeccCCCcccccCCC--CcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRLFPN--NSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~--~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
|+. |+|.+..+++ .++|++++++.++| |. ...-|
T Consensus 235 efi~---GD~~~lp~~d~~~~aDVVf~Nn~~F~----pd------------------------------------l~~aL 271 (438)
T 3uwp_A 235 TLER---GDFLSEEWRERIANTSVIFVNNFAFG----PE------------------------------------VDHQL 271 (438)
T ss_dssp EEEE---CCTTSHHHHHHHHTCSEEEECCTTCC----HH------------------------------------HHHHH
T ss_pred EEEE---CcccCCccccccCCccEEEEcccccC----ch------------------------------------HHHHH
Confidence 333 6887655554 47999999877765 21 12224
Q ss_pred HHHHHHhccCceEEEE
Q 017747 207 RSRSEELVVGGRMVLI 222 (366)
Q Consensus 207 ~~Ra~EL~~GG~lvl~ 222 (366)
....+.|+|||++|++
T Consensus 272 ~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 272 KERFANMKEGGRIVSS 287 (438)
T ss_dssp HHHHTTSCTTCEEEES
T ss_pred HHHHHcCCCCcEEEEe
Confidence 4567899999999987
|
| >2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A* | Back alignment and structure |
|---|
Probab=97.61 E-value=0.0004 Score=66.98 Aligned_cols=104 Identities=16% Similarity=0.172 Sum_probs=62.1
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
+..+|+|+|||+|..++.+ .+. +..+|+..|+.. ....+-+. .. ..+. ..++
T Consensus 64 ~~~~VLDiGcGtG~ls~~l--------a~~---------g~~~v~gvD~s~-~~~~a~~~-------~~-~~~~--~~~i 115 (340)
T 2fyt_A 64 KDKVVLDVGCGTGILSMFA--------AKA---------GAKKVLGVDQSE-ILYQAMDI-------IR-LNKL--EDTI 115 (340)
T ss_dssp TTCEEEEETCTTSHHHHHH--------HHT---------TCSEEEEEESST-HHHHHHHH-------HH-HTTC--TTTE
T ss_pred CCCEEEEeeccCcHHHHHH--------HHc---------CCCEEEEEChHH-HHHHHHHH-------HH-HcCC--CCcE
Confidence 4579999999999988642 221 125899999862 22222111 11 1121 1222
Q ss_pred -EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
++. ++..+--+|++++|+++|....+-+.. ..++..+|..
T Consensus 116 ~~~~---~d~~~~~~~~~~~D~Ivs~~~~~~l~~------------------------------------~~~~~~~l~~ 156 (340)
T 2fyt_A 116 TLIK---GKIEEVHLPVEKVDVIISEWMGYFLLF------------------------------------ESMLDSVLYA 156 (340)
T ss_dssp EEEE---SCTTTSCCSCSCEEEEEECCCBTTBTT------------------------------------TCHHHHHHHH
T ss_pred EEEE---eeHHHhcCCCCcEEEEEEcCchhhccC------------------------------------HHHHHHHHHH
Confidence 333 455444578899999999752211111 1244567888
Q ss_pred HHHHhccCceEE
Q 017747 209 RSEELVVGGRMV 220 (366)
Q Consensus 209 Ra~EL~~GG~lv 220 (366)
+.+-|+|||+++
T Consensus 157 ~~~~LkpgG~li 168 (340)
T 2fyt_A 157 KNKYLAKGGSVY 168 (340)
T ss_dssp HHHHEEEEEEEE
T ss_pred HHhhcCCCcEEE
Confidence 899999999998
|
| >3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=97.61 E-value=0.00012 Score=65.49 Aligned_cols=126 Identities=11% Similarity=-0.002 Sum_probs=67.3
Q ss_pred CCceEEEeecCC-CCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCC
Q 017747 49 PKTINIADLGCS-SGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSP 127 (366)
Q Consensus 49 ~~~~~IaDlGCs-~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~ 127 (366)
+...+|+|+||| +|..++.+. +.. ..+|+..|+.......+-+.+. . .+ ..
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la--------~~~---------~~~v~~vD~s~~~~~~a~~~~~-------~-~~---~~ 105 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAE--------KFF---------NCKVTATEVDEEFFEYARRNIE-------R-NN---SN 105 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHH--------HHH---------CCEEEEEECCHHHHHHHHHHHH-------H-TT---CC
T ss_pred CCCCEEEEcCCCHHHHHHHHHH--------Hhc---------CCEEEEEECCHHHHHHHHHHHH-------H-hC---CC
Confidence 346899999999 999987532 210 2788999986533222221111 1 11 11
Q ss_pred ceEEeccCCCcc-cccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 128 SVYIAGYPGSFY-GRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 128 ~~f~~~vpgSFy-~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
--++. ++.. -.-+|++++|+++++-.++|...... ... ..-+...... ..+...||
T Consensus 106 v~~~~---~d~~~~~~~~~~~fD~I~~npp~~~~~~~~~-~~~--------~~~~~~~~~~-----------~~~~~~~l 162 (230)
T 3evz_A 106 VRLVK---SNGGIIKGVVEGTFDVIFSAPPYYDKPLGRV-LTE--------REAIGGGKYG-----------EEFSVKLL 162 (230)
T ss_dssp CEEEE---CSSCSSTTTCCSCEEEEEECCCCC------------------------CCSSS-----------CHHHHHHH
T ss_pred cEEEe---CCchhhhhcccCceeEEEECCCCcCCccccc-cCh--------hhhhccCccc-----------hHHHHHHH
Confidence 22333 2321 12356789999999988877654111 000 0000000000 12346678
Q ss_pred HHHHHHhccCceEEEEeec
Q 017747 207 RSRSEELVVGGRMVLILLG 225 (366)
Q Consensus 207 ~~Ra~EL~~GG~lvl~~~g 225 (366)
+.-.+-|+|||++++.+..
T Consensus 163 ~~~~~~LkpgG~l~~~~~~ 181 (230)
T 3evz_A 163 EEAFDHLNPGGKVALYLPD 181 (230)
T ss_dssp HHHGGGEEEEEEEEEEEES
T ss_pred HHHHHHhCCCeEEEEEecc
Confidence 8888999999999998644
|
| >2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=97.60 E-value=5.7e-05 Score=64.53 Aligned_cols=75 Identities=17% Similarity=0.151 Sum_probs=45.1
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+.. +..+++..|........+-+.+ .. .+ ..++
T Consensus 35 ~~~~vLdiG~G~G~~~~~l~~------------------~~~~v~~vD~~~~~~~~a~~~~-------~~-~~---~~~~ 85 (183)
T 2yxd_A 35 KDDVVVDVGCGSGGMTVEIAK------------------RCKFVYAIDYLDGAIEVTKQNL-------AK-FN---IKNC 85 (183)
T ss_dssp TTCEEEEESCCCSHHHHHHHT------------------TSSEEEEEECSHHHHHHHHHHH-------HH-TT---CCSE
T ss_pred CCCEEEEeCCCCCHHHHHHHh------------------cCCeEEEEeCCHHHHHHHHHHH-------HH-cC---CCcE
Confidence 457999999999998875311 2378999998653222221111 11 11 1222
Q ss_pred EEeccCCCcccccCCCCcccEEEcccc
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNS 156 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~a 156 (366)
- .+.+++.+ .+|++++|+++++..
T Consensus 86 ~--~~~~d~~~-~~~~~~~D~i~~~~~ 109 (183)
T 2yxd_A 86 Q--IIKGRAED-VLDKLEFNKAFIGGT 109 (183)
T ss_dssp E--EEESCHHH-HGGGCCCSEEEECSC
T ss_pred E--EEECCccc-cccCCCCcEEEECCc
Confidence 1 12346655 677789999999876
|
| >2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=97.59 E-value=0.0001 Score=68.32 Aligned_cols=126 Identities=18% Similarity=0.202 Sum_probs=68.1
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++.+ .++ .|..+++..|+-......+-+.+..+.. .+. ..++
T Consensus 36 ~~~~VLDlG~G~G~~~l~l--------a~~--------~~~~~v~gvDi~~~~~~~a~~n~~~~~~-----~~l--~~~v 92 (260)
T 2ozv_A 36 RACRIADLGAGAGAAGMAV--------AAR--------LEKAEVTLYERSQEMAEFARRSLELPDN-----AAF--SARI 92 (260)
T ss_dssp SCEEEEECCSSSSHHHHHH--------HHH--------CTTEEEEEEESSHHHHHHHHHHTTSGGG-----TTT--GGGE
T ss_pred CCCEEEEeCChHhHHHHHH--------HHh--------CCCCeEEEEECCHHHHHHHHHHHHhhhh-----CCC--cceE
Confidence 4579999999999988753 222 2347899999865433333332221000 111 0122
Q ss_pred -EEeccCCCcccc-------cCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHH-HHH
Q 017747 130 -YIAGYPGSFYGR-------LFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQ-FQE 200 (366)
Q Consensus 130 -f~~~vpgSFy~~-------lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q-~~~ 200 (366)
++. +++.+- .++++++|+++++--+++..... . +...++.+.. ...
T Consensus 93 ~~~~---~D~~~~~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~----~------------------~~~~~~~a~~~~~~ 147 (260)
T 2ozv_A 93 EVLE---ADVTLRAKARVEAGLPDEHFHHVIMNPPYNDAGDRR----T------------------PDALKAEAHAMTEG 147 (260)
T ss_dssp EEEE---CCTTCCHHHHHHTTCCTTCEEEEEECCCC-------------------------------------------C
T ss_pred EEEe---CCHHHHhhhhhhhccCCCCcCEEEECCCCcCCCCCC----C------------------cCHHHHHHhhcCcC
Confidence 333 355432 36789999999985555432100 0 0011111111 123
Q ss_pred HHHHHHHHHHHHhccCceEEEEe
Q 017747 201 DFTLFLRSRSEELVVGGRMVLIL 223 (366)
Q Consensus 201 D~~~FL~~Ra~EL~~GG~lvl~~ 223 (366)
++..||+.-.+-|+|||+|++..
T Consensus 148 ~~~~~l~~~~~~LkpgG~l~~~~ 170 (260)
T 2ozv_A 148 LFEDWIRTASAIMVSGGQLSLIS 170 (260)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CHHHHHHHHHHHcCCCCEEEEEE
Confidence 47888999999999999999976
|
| >3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C* | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00016 Score=65.99 Aligned_cols=76 Identities=14% Similarity=0.083 Sum_probs=45.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+...+ .|..+++..|+.......+-+.+. ..+. ...+
T Consensus 93 ~~~~vldiG~G~G~~~~~l~~~~---------------~~~~~v~~~D~~~~~~~~a~~~~~--------~~~~--~~~v 147 (255)
T 3mb5_A 93 PGDFIVEAGVGSGALTLFLANIV---------------GPEGRVVSYEIREDFAKLAWENIK--------WAGF--DDRV 147 (255)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHH---------------CTTSEEEEECSCHHHHHHHHHHHH--------HHTC--TTTE
T ss_pred CCCEEEEecCCchHHHHHHHHHh---------------CCCeEEEEEecCHHHHHHHHHHHH--------HcCC--CCce
Confidence 45799999999999987643322 234789999986533222221111 1121 1112
Q ss_pred EEeccCCCcccccCCCCcccEEEc
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHS 153 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S 153 (366)
- .+.+++. ..+|++++|++++
T Consensus 148 ~--~~~~d~~-~~~~~~~~D~v~~ 168 (255)
T 3mb5_A 148 T--IKLKDIY-EGIEEENVDHVIL 168 (255)
T ss_dssp E--EECSCGG-GCCCCCSEEEEEE
T ss_pred E--EEECchh-hccCCCCcCEEEE
Confidence 1 2235665 4588999999997
|
| >3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00015 Score=77.69 Aligned_cols=116 Identities=11% Similarity=0.033 Sum_probs=72.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++. +.+. ..|..+|+..|+....-...-+.+.... .....+ ..++
T Consensus 721 ~g~rVLDVGCGTG~lai~--------LAr~-------g~p~a~VtGVDIS~emLe~AReRLa~~l--nAkr~g---l~nV 780 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDS--------LLDY-------PTSLQTIIGVDISPKGLARAAKMLHVKL--NKEACN---VKSA 780 (950)
T ss_dssp CCSEEEEETCSSSHHHHH--------HTSS-------CCCCCEEEEEESCHHHHHHHHHHHHHHT--TTTCSS---CSEE
T ss_pred CCCEEEEECCCCCHHHHH--------HHHh-------CCCCCeEEEEECCHHHHHHHHHHhhhcc--chhhcC---CCce
Confidence 468999999999999874 2121 1234689999997644333322221000 000001 1223
Q ss_pred -EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
|.. |+..+-.++++++|+++++.++||+.. | +...||+.
T Consensus 781 efiq---GDa~dLp~~d~sFDlVV~~eVLeHL~d-p------------------------------------~l~~~L~e 820 (950)
T 3htx_A 781 TLYD---GSILEFDSRLHDVDIGTCLEVIEHMEE-D------------------------------------QACEFGEK 820 (950)
T ss_dssp EEEE---SCTTSCCTTSCSCCEEEEESCGGGSCH-H------------------------------------HHHHHHHH
T ss_pred EEEE---CchHhCCcccCCeeEEEEeCchhhCCh-H------------------------------------HHHHHHHH
Confidence 333 566665678899999999999999744 1 22345667
Q ss_pred HHHHhccCceEEEEeecC
Q 017747 209 RSEELVVGGRMVLILLGR 226 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~ 226 (366)
-.+-|+|| .++++.+..
T Consensus 821 I~RvLKPG-~LIISTPN~ 837 (950)
T 3htx_A 821 VLSLFHPK-LLIVSTPNY 837 (950)
T ss_dssp HHHTTCCS-EEEEEECBG
T ss_pred HHHHcCCC-EEEEEecCc
Confidence 78999999 888887654
|
| >1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A* | Back alignment and structure |
|---|
Probab=97.57 E-value=6.1e-05 Score=68.24 Aligned_cols=80 Identities=19% Similarity=0.160 Sum_probs=45.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+. +. .+ .+|+..|.........-+.+ . ..+ ..++
T Consensus 91 ~~~~vLdiG~G~G~~~~~la--------~~--------~~-~~v~~vD~~~~~~~~a~~~~-------~-~~~---~~~v 142 (235)
T 1jg1_A 91 PGMNILEVGTGSGWNAALIS--------EI--------VK-TDVYTIERIPELVEFAKRNL-------E-RAG---VKNV 142 (235)
T ss_dssp TTCCEEEECCTTSHHHHHHH--------HH--------HC-SCEEEEESCHHHHHHHHHHH-------H-HTT---CCSE
T ss_pred CCCEEEEEeCCcCHHHHHHH--------HH--------hC-CEEEEEeCCHHHHHHHHHHH-------H-HcC---CCCc
Confidence 35799999999999987532 22 12 57888887542222111111 1 111 1233
Q ss_pred EEeccCCCcccccCCCC-cccEEEcccccccc
Q 017747 130 YIAGYPGSFYGRLFPNN-SLHFIHSSNSLHWL 160 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~-s~~~~~S~~alhWl 160 (366)
- .+.+++ ..-+|++ .+|+++++.++|++
T Consensus 143 ~--~~~~d~-~~~~~~~~~fD~Ii~~~~~~~~ 171 (235)
T 1jg1_A 143 H--VILGDG-SKGFPPKAPYDVIIVTAGAPKI 171 (235)
T ss_dssp E--EEESCG-GGCCGGGCCEEEEEECSBBSSC
T ss_pred E--EEECCc-ccCCCCCCCccEEEECCcHHHH
Confidence 1 122455 3334554 49999999988874
|
| >3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=97.56 E-value=7.6e-05 Score=71.81 Aligned_cols=115 Identities=14% Similarity=0.033 Sum_probs=69.6
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+++.+|+|+|||+|..+.. +.++ .|..++...|+-.......-+.++. .. .++
T Consensus 88 p~~~rVLdIG~G~G~la~~--------la~~--------~p~~~v~~VEidp~vi~~Ar~~~~~----------~~-~~r 140 (317)
T 3gjy_A 88 ASKLRITHLGGGACTMARY--------FADV--------YPQSRNTVVELDAELARLSREWFDI----------PR-APR 140 (317)
T ss_dssp GGGCEEEEESCGGGHHHHH--------HHHH--------STTCEEEEEESCHHHHHHHHHHSCC----------CC-TTT
T ss_pred CCCCEEEEEECCcCHHHHH--------HHHH--------CCCcEEEEEECCHHHHHHHHHhccc----------cC-CCc
Confidence 4467999999999988764 3332 2346888888865322222222211 00 122
Q ss_pred e-EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 129 ~-f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
+ ++.+-...|... ++++++|++++....+| ..|..+.. ..|++
T Consensus 141 v~v~~~Da~~~l~~-~~~~~fDvIi~D~~~~~--~~~~~L~t---------------------------------~efl~ 184 (317)
T 3gjy_A 141 VKIRVDDARMVAES-FTPASRDVIIRDVFAGA--ITPQNFTT---------------------------------VEFFE 184 (317)
T ss_dssp EEEEESCHHHHHHT-CCTTCEEEEEECCSTTS--CCCGGGSB---------------------------------HHHHH
T ss_pred eEEEECcHHHHHhh-ccCCCCCEEEECCCCcc--ccchhhhH---------------------------------HHHHH
Confidence 2 444332233222 46789999999877776 23333321 24677
Q ss_pred HHHHHhccCceEEEEeecC
Q 017747 208 SRSEELVVGGRMVLILLGR 226 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~g~ 226 (366)
...+-|+|||+|++.....
T Consensus 185 ~~~r~LkpgGvlv~~~~~~ 203 (317)
T 3gjy_A 185 HCHRGLAPGGLYVANCGDH 203 (317)
T ss_dssp HHHHHEEEEEEEEEEEEEC
T ss_pred HHHHhcCCCcEEEEEecCC
Confidence 8889999999999998643
|
| >1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20 | Back alignment and structure |
|---|
Probab=97.56 E-value=7.1e-05 Score=68.10 Aligned_cols=100 Identities=13% Similarity=0.129 Sum_probs=60.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++.+ ... .|..+|+..|........+-+.. ...+ ..++
T Consensus 70 ~~~~vLDiG~G~G~~~~~l--------a~~--------~~~~~v~~vD~s~~~~~~a~~~~--------~~~~---~~~v 122 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPI--------KIC--------FPHLHVTIVDSLNKRITFLEKLS--------EALQ---LENT 122 (240)
T ss_dssp GCCEEEEECSSSCTTHHHH--------HHH--------CTTCEEEEEESCHHHHHHHHHHH--------HHHT---CSSE
T ss_pred CCCEEEEecCCCCHHHHHH--------HHh--------CCCCEEEEEeCCHHHHHHHHHHH--------HHcC---CCCE
Confidence 4579999999999998753 221 23478999998653222221111 1111 1232
Q ss_pred -EEeccCCCcccccCC---CCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRLFP---NNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLF 205 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp---~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~F 205 (366)
|+. +++.+-.++ ++++|+++|... . |+..+
T Consensus 123 ~~~~---~d~~~~~~~~~~~~~fD~V~~~~~------------~-------------------------------~~~~~ 156 (240)
T 1xdz_A 123 TFCH---DRAETFGQRKDVRESYDIVTARAV------------A-------------------------------RLSVL 156 (240)
T ss_dssp EEEE---SCHHHHTTCTTTTTCEEEEEEECC------------S-------------------------------CHHHH
T ss_pred EEEe---ccHHHhcccccccCCccEEEEecc------------C-------------------------------CHHHH
Confidence 333 455443343 679999998440 0 23456
Q ss_pred HHHHHHHhccCceEEEE
Q 017747 206 LRSRSEELVVGGRMVLI 222 (366)
Q Consensus 206 L~~Ra~EL~~GG~lvl~ 222 (366)
|+.-.+-|+|||++++.
T Consensus 157 l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 157 SELCLPLVKKNGLFVAL 173 (240)
T ss_dssp HHHHGGGEEEEEEEEEE
T ss_pred HHHHHHhcCCCCEEEEE
Confidence 67778999999999886
|
| >1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6 | Back alignment and structure |
|---|
Probab=97.52 E-value=0.0002 Score=68.73 Aligned_cols=104 Identities=18% Similarity=0.175 Sum_probs=61.9
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce-
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV- 129 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~- 129 (366)
..+|+|+|||+|..++.+ .+. +..+|+..|+. .....+-+. .. ..+. .+++
T Consensus 39 ~~~VLDiGcGtG~ls~~l--------a~~---------g~~~v~~vD~s-~~~~~a~~~-------~~-~~~~--~~~i~ 90 (328)
T 1g6q_1 39 DKIVLDVGCGTGILSMFA--------AKH---------GAKHVIGVDMS-SIIEMAKEL-------VE-LNGF--SDKIT 90 (328)
T ss_dssp TCEEEEETCTTSHHHHHH--------HHT---------CCSEEEEEESS-THHHHHHHH-------HH-HTTC--TTTEE
T ss_pred CCEEEEecCccHHHHHHH--------HHC---------CCCEEEEEChH-HHHHHHHHH-------HH-HcCC--CCCEE
Confidence 479999999999988642 221 12589999986 322211111 11 1121 1122
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
++. +++.+-.+|++++|+++|....+.+... .++..+|..+
T Consensus 91 ~~~---~d~~~~~~~~~~~D~Ivs~~~~~~l~~~------------------------------------~~~~~~l~~~ 131 (328)
T 1g6q_1 91 LLR---GKLEDVHLPFPKVDIIISEWMGYFLLYE------------------------------------SMMDTVLYAR 131 (328)
T ss_dssp EEE---SCTTTSCCSSSCEEEEEECCCBTTBSTT------------------------------------CCHHHHHHHH
T ss_pred EEE---CchhhccCCCCcccEEEEeCchhhcccH------------------------------------HHHHHHHHHH
Confidence 333 4554444777899999997544433211 1234567888
Q ss_pred HHHhccCceEEE
Q 017747 210 SEELVVGGRMVL 221 (366)
Q Consensus 210 a~EL~~GG~lvl 221 (366)
.+-|+|||+++.
T Consensus 132 ~~~LkpgG~li~ 143 (328)
T 1g6q_1 132 DHYLVEGGLIFP 143 (328)
T ss_dssp HHHEEEEEEEES
T ss_pred HhhcCCCeEEEE
Confidence 999999999983
|
| >1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38 | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00016 Score=68.99 Aligned_cols=128 Identities=19% Similarity=0.085 Sum_probs=69.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..|..+ .+.. .+..+|+.+|+.......+-+.+. . .| ..++
T Consensus 118 ~g~~VLDlg~G~G~~t~~l--------a~~~-------~~~~~v~avD~s~~~l~~a~~~~~-------~-~g---~~~v 171 (315)
T 1ixk_A 118 PGEIVADMAAAPGGKTSYL--------AQLM-------RNDGVIYAFDVDENRLRETRLNLS-------R-LG---VLNV 171 (315)
T ss_dssp TTCEEEECCSSCSHHHHHH--------HHHT-------TTCSEEEEECSCHHHHHHHHHHHH-------H-HT---CCSE
T ss_pred CCCEEEEeCCCCCHHHHHH--------HHHh-------CCCCEEEEEcCCHHHHHHHHHHHH-------H-hC---CCeE
Confidence 3479999999999999853 2221 123789999987543333322221 1 12 1232
Q ss_pred -EEeccCCCcccccCCCCcccEEEcc---cccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHSS---NSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLF 205 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S~---~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~F 205 (366)
++. +++..-..+++++|.+++. +.+.-+.+.|..... .++.. .....+.-..+
T Consensus 172 ~~~~---~D~~~~~~~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~---------------~~~~~-----~~~~~~~q~~~ 228 (315)
T 1ixk_A 172 ILFH---SSSLHIGELNVEFDKILLDAPCTGSGTIHKNPERKWN---------------RTMDD-----IKFCQGLQMRL 228 (315)
T ss_dssp EEES---SCGGGGGGGCCCEEEEEEECCTTSTTTCC-----------------------CCHHH-----HHHHHHHHHHH
T ss_pred EEEE---CChhhcccccccCCEEEEeCCCCCcccccCChhHhhc---------------CCHHH-----HHHHHHHHHHH
Confidence 333 3443322346789999873 112212222321100 01111 12334455688
Q ss_pred HHHHHHHhccCceEEEEeecC
Q 017747 206 LRSRSEELVVGGRMVLILLGR 226 (366)
Q Consensus 206 L~~Ra~EL~~GG~lvl~~~g~ 226 (366)
|+.-.+-|+|||+|+++....
T Consensus 229 L~~~~~~LkpGG~lv~stcs~ 249 (315)
T 1ixk_A 229 LEKGLEVLKPGGILVYSTCSL 249 (315)
T ss_dssp HHHHHHHEEEEEEEEEEESCC
T ss_pred HHHHHHhCCCCCEEEEEeCCC
Confidence 888899999999999987543
|
| >1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A* | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00015 Score=69.29 Aligned_cols=119 Identities=13% Similarity=0.117 Sum_probs=69.2
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHH-HhhhcCCCCCC
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQ-LRNERGGGSSP 127 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~-~~~~~~~~~~~ 127 (366)
+.+.+|+|+|||+|..+..+ .+ ..+..+++..|+........-+.++.+... +. . .+
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l--------~~--------~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~----~--~~ 133 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREV--------LK--------HPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFD----D--PR 133 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHH--------TT--------STTCCEEEEEESCHHHHHHHHHHCHHHHTTGGG----C--TT
T ss_pred CCCCeEEEEcCCcCHHHHHH--------Hh--------cCCCCEEEEEECCHHHHHHHHHHhHhhcccccc----C--Cc
Confidence 45689999999999988642 11 123468999998654333333333211000 00 0 11
Q ss_pred ceEEeccCCCccccc-CCCCcccEEEccccccc-ccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 017747 128 SVYIAGYPGSFYGRL-FPNNSLHFIHSSNSLHW-LSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLF 205 (366)
Q Consensus 128 ~~f~~~vpgSFy~~l-fp~~s~~~~~S~~alhW-ls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~F 205 (366)
--++.+ +..+-+ .+++++|++++....|| ++..+..+. ...|
T Consensus 134 v~~~~~---D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~~~~l~---------------------------------~~~~ 177 (314)
T 1uir_A 134 AVLVID---DARAYLERTEERYDVVIIDLTDPVGEDNPARLLY---------------------------------TVEF 177 (314)
T ss_dssp EEEEES---CHHHHHHHCCCCEEEEEEECCCCBSTTCGGGGGS---------------------------------SHHH
T ss_pred eEEEEc---hHHHHHHhcCCCccEEEECCCCcccccCcchhcc---------------------------------HHHH
Confidence 123333 333222 25789999999988777 222111110 1346
Q ss_pred HHHHHHHhccCceEEEEeec
Q 017747 206 LRSRSEELVVGGRMVLILLG 225 (366)
Q Consensus 206 L~~Ra~EL~~GG~lvl~~~g 225 (366)
++.-.+-|+|||+|++....
T Consensus 178 l~~~~~~LkpgG~lv~~~~~ 197 (314)
T 1uir_A 178 YRLVKAHLNPGGVMGMQTGM 197 (314)
T ss_dssp HHHHHHTEEEEEEEEEEEEE
T ss_pred HHHHHHhcCCCcEEEEEccC
Confidence 67778999999999998644
|
| >2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00028 Score=63.66 Aligned_cols=36 Identities=17% Similarity=0.254 Sum_probs=25.9
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPT 100 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~ 100 (366)
...+|+|+|||+|..+..+.+.+ .|..+|+..|+..
T Consensus 77 ~~~~vLDlG~G~G~~~~~la~~~---------------g~~~~v~gvD~s~ 112 (233)
T 2ipx_A 77 PGAKVLYLGAASGTTVSHVSDIV---------------GPDGLVYAVEFSH 112 (233)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHH---------------CTTCEEEEECCCH
T ss_pred CCCEEEEEcccCCHHHHHHHHHh---------------CCCcEEEEEECCH
Confidence 35799999999999987533222 1336889999864
|
| >1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A | Back alignment and structure |
|---|
Probab=97.49 E-value=0.0003 Score=63.42 Aligned_cols=36 Identities=17% Similarity=0.201 Sum_probs=25.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTN 101 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~N 101 (366)
...+|+|+|||+|..+..+ .+.+ +..+|+..|....
T Consensus 74 ~~~~VLDlGcG~G~~~~~l--------a~~~--------~~~~v~gvD~s~~ 109 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHV--------ADIA--------DKGIVYAIEYAPR 109 (230)
T ss_dssp TTCEEEEESCCSSHHHHHH--------HHHT--------TTSEEEEEESCHH
T ss_pred CCCEEEEEcccCCHHHHHH--------HHHc--------CCcEEEEEECCHH
Confidence 4579999999999998753 2221 1368899998653
|
| >2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=97.47 E-value=8.9e-05 Score=71.04 Aligned_cols=36 Identities=14% Similarity=0.128 Sum_probs=26.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPT 100 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~ 100 (366)
...+|+|+|||+|..++.+...+ .|..+|+..|+..
T Consensus 105 ~g~~VLDiG~G~G~~~~~la~~~---------------g~~~~v~~vD~~~ 140 (336)
T 2b25_A 105 PGDTVLEAGSGSGGMSLFLSKAV---------------GSQGRVISFEVRK 140 (336)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHH---------------CTTCEEEEEESSH
T ss_pred CCCEEEEeCCCcCHHHHHHHHHh---------------CCCceEEEEeCCH
Confidence 35799999999999998643222 2347888888854
|
| >3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00018 Score=66.07 Aligned_cols=37 Identities=11% Similarity=0.156 Sum_probs=26.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTN 101 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~N 101 (366)
.+.+|+|+|||+|..|+.+ .+. -++..+|+..|+...
T Consensus 63 ~~~~VLdiG~G~G~~~~~l--------a~~-------~~~~~~v~~vD~s~~ 99 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWM--------ARE-------LPADGQLLTLEADAH 99 (248)
T ss_dssp TCSEEEEECCTTSHHHHHH--------HTT-------SCTTCEEEEEECCHH
T ss_pred CCCEEEEecCCchHHHHHH--------HHh-------CCCCCEEEEEECCHH
Confidence 3579999999999998752 221 122588999998653
|
| >2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46 | Back alignment and structure |
|---|
Probab=97.45 E-value=4.3e-05 Score=67.85 Aligned_cols=79 Identities=16% Similarity=0.077 Sum_probs=44.4
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce-
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV- 129 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~- 129 (366)
..+|+|+|||+|..++.++ .+ .. .+|+..|+.......+-+.+. . .+.. ..++
T Consensus 54 ~~~vLDlGcGtG~~~~~~~--------~~--------~~-~~v~gvD~s~~~l~~a~~~~~-------~-~~~~-~~~v~ 107 (201)
T 2ift_A 54 QSECLDGFAGSGSLGFEAL--------SR--------QA-KKVTFLELDKTVANQLKKNLQ-------T-LKCS-SEQAE 107 (201)
T ss_dssp TCEEEETTCTTCHHHHHHH--------HT--------TC-SEEEEECSCHHHHHHHHHHHH-------H-TTCC-TTTEE
T ss_pred CCeEEEcCCccCHHHHHHH--------Hc--------cC-CEEEEEECCHHHHHHHHHHHH-------H-hCCC-ccceE
Confidence 4689999999999987421 11 11 579999987543333322221 1 1110 0222
Q ss_pred EEeccCCCcccccC--CCCc-ccEEEcccccc
Q 017747 130 YIAGYPGSFYGRLF--PNNS-LHFIHSSNSLH 158 (366)
Q Consensus 130 f~~~vpgSFy~~lf--p~~s-~~~~~S~~alh 158 (366)
|+. +++.+-+. ++++ +|++++...+|
T Consensus 108 ~~~---~d~~~~~~~~~~~~~fD~I~~~~~~~ 136 (201)
T 2ift_A 108 VIN---QSSLDFLKQPQNQPHFDVVFLDPPFH 136 (201)
T ss_dssp EEC---SCHHHHTTSCCSSCCEEEEEECCCSS
T ss_pred EEE---CCHHHHHHhhccCCCCCEEEECCCCC
Confidence 333 45544332 4678 99999865544
|
| >2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54 | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00043 Score=63.16 Aligned_cols=86 Identities=8% Similarity=-0.006 Sum_probs=45.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++.+.... |..+|+..|+.......+-+.+. ..+.. ..--
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~----------------~~~~v~gvD~s~~~~~~a~~~~~--------~~~~~-~~v~ 119 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATL----------------NGWYFLATEVDDMCFNYAKKNVE--------QNNLS-DLIK 119 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHH----------------HCCEEEEEESCHHHHHHHHHHHH--------HTTCT-TTEE
T ss_pred CCCEEEEeCCChhHHHHHHHHhC----------------CCCeEEEEECCHHHHHHHHHHHH--------HcCCC-ccEE
Confidence 35799999999999887532221 12789999986543332222111 11111 1122
Q ss_pred EEeccCCC-cccccCC---CCcccEEEccccccccc
Q 017747 130 YIAGYPGS-FYGRLFP---NNSLHFIHSSNSLHWLS 161 (366)
Q Consensus 130 f~~~vpgS-Fy~~lfp---~~s~~~~~S~~alhWls 161 (366)
|+.+--.+ +.+ .++ ++++|+++|+-.+|+..
T Consensus 120 ~~~~d~~~~~~~-~~~~~~~~~fD~i~~npp~~~~~ 154 (254)
T 2h00_A 120 VVKVPQKTLLMD-ALKEESEIIYDFCMCNPPFFANQ 154 (254)
T ss_dssp EEECCTTCSSTT-TSTTCCSCCBSEEEECCCCC---
T ss_pred EEEcchhhhhhh-hhhcccCCcccEEEECCCCccCc
Confidence 44432112 222 244 36899999987777644
|
| >1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00023 Score=65.81 Aligned_cols=79 Identities=11% Similarity=0.123 Sum_probs=45.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+...+ .|..+++..|+.......+-+.+. ...|.. ..++
T Consensus 99 ~~~~vLdiG~G~G~~~~~l~~~~---------------~~~~~v~~vD~~~~~~~~a~~~~~-------~~~g~~-~~~v 155 (280)
T 1i9g_A 99 PGARVLEAGAGSGALTLSLLRAV---------------GPAGQVISYEQRADHAEHARRNVS-------GCYGQP-PDNW 155 (280)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHH---------------CTTSEEEEECSCHHHHHHHHHHHH-------HHHTSC-CTTE
T ss_pred CCCEEEEEcccccHHHHHHHHHh---------------CCCCEEEEEeCCHHHHHHHHHHHH-------HhcCCC-CCcE
Confidence 35799999999999987533222 234789999985432222221111 100100 1122
Q ss_pred EEeccCCCcccccCCCCcccEEEc
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHS 153 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S 153 (366)
- .+.+++.+..++++++|++++
T Consensus 156 ~--~~~~d~~~~~~~~~~~D~v~~ 177 (280)
T 1i9g_A 156 R--LVVSDLADSELPDGSVDRAVL 177 (280)
T ss_dssp E--EECSCGGGCCCCTTCEEEEEE
T ss_pred E--EEECchHhcCCCCCceeEEEE
Confidence 1 233577666678889999998
|
| >1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00023 Score=66.14 Aligned_cols=75 Identities=9% Similarity=0.133 Sum_probs=43.9
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+...+ .|..+++..|+.......+-+. .....| ..++
T Consensus 110 ~~~~VLD~G~G~G~~~~~la~~~---------------~~~~~v~~vD~s~~~~~~a~~~-------~~~~~g---~~~v 164 (275)
T 1yb2_A 110 PGMDILEVGVGSGNMSSYILYAL---------------NGKGTLTVVERDEDNLKKAMDN-------LSEFYD---IGNV 164 (275)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHH---------------TTSSEEEEECSCHHHHHHHHHH-------HHTTSC---CTTE
T ss_pred CcCEEEEecCCCCHHHHHHHHHc---------------CCCCEEEEEECCHHHHHHHHHH-------HHhcCC---CCcE
Confidence 35799999999999987543222 2347899999854322211111 111001 1222
Q ss_pred -EEeccCCCcccccCCCCcccEEEc
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHS 153 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S 153 (366)
|.. +++.+ .+|++++|++++
T Consensus 165 ~~~~---~d~~~-~~~~~~fD~Vi~ 185 (275)
T 1yb2_A 165 RTSR---SDIAD-FISDQMYDAVIA 185 (275)
T ss_dssp EEEC---SCTTT-CCCSCCEEEEEE
T ss_pred EEEE---Cchhc-cCcCCCccEEEE
Confidence 333 46654 678889999997
|
| >3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0 | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00034 Score=61.86 Aligned_cols=26 Identities=15% Similarity=0.046 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHhccCceEEEEeecC
Q 017747 201 DFTLFLRSRSEELVVGGRMVLILLGR 226 (366)
Q Consensus 201 D~~~FL~~Ra~EL~~GG~lvl~~~g~ 226 (366)
.....|+.-.+-|+|||+|++..+..
T Consensus 117 l~~~~l~~a~~~LkpGG~lv~k~~~~ 142 (191)
T 3dou_A 117 IGQRVMEIAVRYLRNGGNVLLKQFQG 142 (191)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred HHHHHHHHHHHHccCCCEEEEEEcCC
Confidence 44566777789999999999987643
|
| >3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ... | Back alignment and structure |
|---|
Probab=97.41 E-value=8.9e-05 Score=66.48 Aligned_cols=37 Identities=11% Similarity=0.209 Sum_probs=26.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTN 101 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~N 101 (366)
++.+|+|+|||+|..|+.+ .+. -++..+|+..|+...
T Consensus 58 ~~~~vLdiG~G~G~~~~~l--------a~~-------~~~~~~v~~vD~~~~ 94 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRM--------ARL-------LQPGARLLTMEINPD 94 (221)
T ss_dssp CCSEEEEECCTTSHHHHHH--------HTT-------SCTTCEEEEEESCHH
T ss_pred CCCEEEEECCCCCHHHHHH--------HHh-------CCCCCEEEEEeCChH
Confidence 3579999999999999753 221 123478999998653
|
| >1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46 | Back alignment and structure |
|---|
Probab=97.38 E-value=8.2e-05 Score=63.01 Aligned_cols=18 Identities=22% Similarity=0.113 Sum_probs=15.4
Q ss_pred CceEEEeecCCCCcchHH
Q 017747 50 KTINIADLGCSSGPNTLA 67 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~ 67 (366)
...+|+|+|||+|..++.
T Consensus 41 ~~~~vLD~GcG~G~~~~~ 58 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLE 58 (171)
T ss_dssp TCCEEEEETCSSCHHHHH
T ss_pred CCCeEEEeCCCcCHHHHH
Confidence 457899999999998875
|
| >3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A* | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00019 Score=68.39 Aligned_cols=102 Identities=9% Similarity=-0.004 Sum_probs=61.7
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
....+|+|+|||+|+.|...+. + .+..+|+.-|+....-...-+.+. ..|. .+-
T Consensus 121 ~~g~rVLDIGcG~G~~ta~~lA-------~---------~~ga~V~gIDis~~~l~~Ar~~~~--------~~gl--~~v 174 (298)
T 3fpf_A 121 RRGERAVFIGGGPLPLTGILLS-------H---------VYGMRVNVVEIEPDIAELSRKVIE--------GLGV--DGV 174 (298)
T ss_dssp CTTCEEEEECCCSSCHHHHHHH-------H---------TTCCEEEEEESSHHHHHHHHHHHH--------HHTC--CSE
T ss_pred CCcCEEEEECCCccHHHHHHHH-------H---------ccCCEEEEEECCHHHHHHHHHHHH--------hcCC--CCe
Confidence 4578999999999998764321 1 123789999986532222211111 1111 112
Q ss_pred eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
-|+.+ +..+ +|++++|++++... +| |...+|+.
T Consensus 175 ~~v~g---Da~~--l~d~~FDvV~~~a~------~~------------------------------------d~~~~l~e 207 (298)
T 3fpf_A 175 NVITG---DETV--IDGLEFDVLMVAAL------AE------------------------------------PKRRVFRN 207 (298)
T ss_dssp EEEES---CGGG--GGGCCCSEEEECTT------CS------------------------------------CHHHHHHH
T ss_pred EEEEC---chhh--CCCCCcCEEEECCC------cc------------------------------------CHHHHHHH
Confidence 34553 4433 46899999997543 12 12234567
Q ss_pred HHHHhccCceEEEEe
Q 017747 209 RSEELVVGGRMVLIL 223 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~ 223 (366)
-.+-|+|||+|++..
T Consensus 208 l~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 208 IHRYVDTETRIIYRT 222 (298)
T ss_dssp HHHHCCTTCEEEEEE
T ss_pred HHHHcCCCcEEEEEc
Confidence 789999999999864
|
| >1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A* | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00035 Score=66.14 Aligned_cols=115 Identities=11% Similarity=0.012 Sum_probs=62.9
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+.+.+|+|+|||+|..+..+ .+ ..+..+|+..|+...-....-+.++.+...+. .++
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l--------~~--------~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~-------~~~ 145 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREV--------LK--------HDSVEKAILCEVDGLVIEAARKYLKQTSCGFD-------DPR 145 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHH--------TT--------STTCSEEEEEESCHHHHHHHHHHCHHHHGGGG-------CTT
T ss_pred CCCCEEEEEcCCcCHHHHHH--------Hh--------cCCCCEEEEEECCHHHHHHHHHHhHhhccccC-------CCc
Confidence 45689999999999988642 11 12347899999865433333333322111110 122
Q ss_pred e-EEeccCCCccccc-CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYGRL-FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 129 ~-f~~~vpgSFy~~l-fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
+ ++.+ +..+-+ .+++++|++++...-+|... +..+ ....||
T Consensus 146 v~~~~~---D~~~~l~~~~~~fD~Ii~d~~~~~~~~-~~~l---------------------------------~~~~~l 188 (296)
T 1inl_A 146 AEIVIA---NGAEYVRKFKNEFDVIIIDSTDPTAGQ-GGHL---------------------------------FTEEFY 188 (296)
T ss_dssp EEEEES---CHHHHGGGCSSCEEEEEEEC-----------C---------------------------------CSHHHH
T ss_pred eEEEEC---cHHHHHhhCCCCceEEEEcCCCcccCc-hhhh---------------------------------hHHHHH
Confidence 2 3333 432222 24678999998655555321 1111 113466
Q ss_pred HHHHHHhccCceEEEEe
Q 017747 207 RSRSEELVVGGRMVLIL 223 (366)
Q Consensus 207 ~~Ra~EL~~GG~lvl~~ 223 (366)
+.-.+-|+|||+|++..
T Consensus 189 ~~~~~~LkpgG~lv~~~ 205 (296)
T 1inl_A 189 QACYDALKEDGVFSAET 205 (296)
T ss_dssp HHHHHHEEEEEEEEEEC
T ss_pred HHHHHhcCCCcEEEEEc
Confidence 77789999999999985
|
| >2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A* | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00072 Score=61.70 Aligned_cols=39 Identities=13% Similarity=0.040 Sum_probs=27.1
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCC
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTN 101 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~N 101 (366)
+.+|+|+|||+|..|+.+.+.+ ... .|..+|+..|+...
T Consensus 82 ~~~VLDiG~GtG~~t~~la~~~--------~~~----~~~~~V~gvD~s~~ 120 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFRDLT--------KIM----GIDCQVIGIDRDLS 120 (236)
T ss_dssp CSEEEEECCTTSHHHHHHHHHH--------HHT----TCCCEEEEEESCCT
T ss_pred CCEEEEEeCCCCHHHHHHHHhh--------hhc----CCCCEEEEEeCChH
Confidence 4699999999999998643321 111 23478999998654
|
| >3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus} | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00046 Score=61.40 Aligned_cols=101 Identities=15% Similarity=0.098 Sum_probs=59.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++.+ .+. ..+|+..|+.......+-+. . ...+. ..++
T Consensus 55 ~~~~vLDlGcG~G~~~~~l--------a~~----------~~~v~~vD~s~~~~~~a~~~-------~-~~~g~--~~~v 106 (204)
T 3njr_A 55 RGELLWDIGGGSGSVSVEW--------CLA----------GGRAITIEPRADRIENIQKN-------I-DTYGL--SPRM 106 (204)
T ss_dssp TTCEEEEETCTTCHHHHHH--------HHT----------TCEEEEEESCHHHHHHHHHH-------H-HHTTC--TTTE
T ss_pred CCCEEEEecCCCCHHHHHH--------HHc----------CCEEEEEeCCHHHHHHHHHH-------H-HHcCC--CCCE
Confidence 4579999999999998752 221 26788999865322222111 1 11111 1122
Q ss_pred -EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
++. +++.+.+....++|++++..++ + .. +|+.
T Consensus 107 ~~~~---~d~~~~~~~~~~~D~v~~~~~~-----------~--------------------------------~~-~l~~ 139 (204)
T 3njr_A 107 RAVQ---GTAPAALADLPLPEAVFIGGGG-----------S--------------------------------QA-LYDR 139 (204)
T ss_dssp EEEE---SCTTGGGTTSCCCSEEEECSCC-----------C--------------------------------HH-HHHH
T ss_pred EEEe---CchhhhcccCCCCCEEEECCcc-----------c--------------------------------HH-HHHH
Confidence 333 4555544444578998865432 0 11 3455
Q ss_pred HHHHhccCceEEEEeec
Q 017747 209 RSEELVVGGRMVLILLG 225 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g 225 (366)
-.+-|+|||++++....
T Consensus 140 ~~~~LkpgG~lv~~~~~ 156 (204)
T 3njr_A 140 LWEWLAPGTRIVANAVT 156 (204)
T ss_dssp HHHHSCTTCEEEEEECS
T ss_pred HHHhcCCCcEEEEEecC
Confidence 57889999999998743
|
| >1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A | Back alignment and structure |
|---|
Probab=97.35 E-value=0.0004 Score=67.11 Aligned_cols=114 Identities=17% Similarity=0.117 Sum_probs=66.7
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+.+.+|+|+|||+|..+.. +.+ ..|..+|+..|+........-+.++.+...+. .++
T Consensus 119 ~~~~~VLdIG~G~G~~a~~--------la~--------~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~-------~~r 175 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLRE--------VAR--------HASIEQIDMCEIDKMVVDVSKQFFPDVAIGYE-------DPR 175 (334)
T ss_dssp SCCCEEEEETCSSSHHHHH--------HTT--------CTTCCEEEEEESCHHHHHHHHHHCHHHHGGGG-------STT
T ss_pred CCCCEEEEECCCccHHHHH--------HHH--------cCCCCEEEEEECCHHHHHHHHHHHHhhccccC-------CCc
Confidence 4568999999999998864 211 13447899999876444444333332110110 112
Q ss_pred e-EEeccCCCccccc--CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYGRL--FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLF 205 (366)
Q Consensus 129 ~-f~~~vpgSFy~~l--fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~F 205 (366)
+ ++. ++..+-+ ++++++|++++...-+|-. +..+ ....|
T Consensus 176 v~~~~---~D~~~~l~~~~~~~fDlIi~d~~~p~~~--~~~l---------------------------------~~~~~ 217 (334)
T 1xj5_A 176 VNLVI---GDGVAFLKNAAEGSYDAVIVDSSDPIGP--AKEL---------------------------------FEKPF 217 (334)
T ss_dssp EEEEE---SCHHHHHHTSCTTCEEEEEECCCCTTSG--GGGG---------------------------------GSHHH
T ss_pred EEEEE---CCHHHHHHhccCCCccEEEECCCCccCc--chhh---------------------------------hHHHH
Confidence 2 333 3443322 3578999999966533310 1100 01356
Q ss_pred HHHHHHHhccCceEEEEe
Q 017747 206 LRSRSEELVVGGRMVLIL 223 (366)
Q Consensus 206 L~~Ra~EL~~GG~lvl~~ 223 (366)
++.-.+-|+|||+|++..
T Consensus 218 l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 218 FQSVARALRPGGVVCTQA 235 (334)
T ss_dssp HHHHHHHEEEEEEEEEEC
T ss_pred HHHHHHhcCCCcEEEEec
Confidence 677789999999999973
|
| >2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=97.35 E-value=0.0004 Score=62.52 Aligned_cols=102 Identities=12% Similarity=0.142 Sum_probs=59.7
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce-
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV- 129 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~- 129 (366)
..+|+|+|||+|..++.+ .+. .|..+|+..|........+-+.+ . ..+. ..++
T Consensus 55 ~~~vLdiG~G~G~~~~~l--------a~~--------~~~~~v~~vD~~~~~~~~a~~~~-------~-~~~~--~~~v~ 108 (233)
T 2gpy_A 55 PARILEIGTAIGYSAIRM--------AQA--------LPEATIVSIERDERRYEEAHKHV-------K-ALGL--ESRIE 108 (233)
T ss_dssp CSEEEEECCTTSHHHHHH--------HHH--------CTTCEEEEECCCHHHHHHHHHHH-------H-HTTC--TTTEE
T ss_pred CCEEEEecCCCcHHHHHH--------HHH--------CCCCEEEEEECCHHHHHHHHHHH-------H-HcCC--CCcEE
Confidence 569999999999998753 222 12478999998643222221111 1 1111 1122
Q ss_pred EEeccCCCccccc---CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRL---FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 130 f~~~vpgSFy~~l---fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
+.. +++.+.+ ..++++|++++....+ ++..+|
T Consensus 109 ~~~---~d~~~~~~~~~~~~~fD~I~~~~~~~------------------------------------------~~~~~l 143 (233)
T 2gpy_A 109 LLF---GDALQLGEKLELYPLFDVLFIDAAKG------------------------------------------QYRRFF 143 (233)
T ss_dssp EEC---SCGGGSHHHHTTSCCEEEEEEEGGGS------------------------------------------CHHHHH
T ss_pred EEE---CCHHHHHHhcccCCCccEEEECCCHH------------------------------------------HHHHHH
Confidence 333 3543322 1267899999754422 233456
Q ss_pred HHHHHHhccCceEEEEe
Q 017747 207 RSRSEELVVGGRMVLIL 223 (366)
Q Consensus 207 ~~Ra~EL~~GG~lvl~~ 223 (366)
+.-.+-|+|||++++..
T Consensus 144 ~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 144 DMYSPMVRPGGLILSDN 160 (233)
T ss_dssp HHHGGGEEEEEEEEEET
T ss_pred HHHHHHcCCCeEEEEEc
Confidence 67788999999999974
|
| >2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46 | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00021 Score=61.28 Aligned_cols=35 Identities=14% Similarity=-0.030 Sum_probs=25.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTN 101 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~N 101 (366)
...+|+|+|||+|..++.+ .++ +..+|+..|+...
T Consensus 31 ~~~~vLDlGcG~G~~~~~l--------~~~---------~~~~v~~vD~~~~ 65 (177)
T 2esr_A 31 NGGRVLDLFAGSGGLAIEA--------VSR---------GMSAAVLVEKNRK 65 (177)
T ss_dssp CSCEEEEETCTTCHHHHHH--------HHT---------TCCEEEEECCCHH
T ss_pred CCCeEEEeCCCCCHHHHHH--------HHc---------CCCEEEEEECCHH
Confidence 4579999999999998742 121 2268999998653
|
| >1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31 | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00049 Score=68.87 Aligned_cols=36 Identities=14% Similarity=0.097 Sum_probs=25.9
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTN 101 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~N 101 (366)
...+|+|+|||+|..++.+.... +..+|+.-|+...
T Consensus 242 ~g~~VLDLGCGsG~la~~LA~~~----------------g~~~V~GVDis~~ 277 (433)
T 1u2z_A 242 KGDTFMDLGSGVGNCVVQAALEC----------------GCALSFGCEIMDD 277 (433)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH----------------CCSEEEEEECCHH
T ss_pred CCCEEEEeCCCcCHHHHHHHHHC----------------CCCEEEEEeCCHH
Confidence 45799999999999987532221 1257889998654
|
| >4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.31 E-value=0.001 Score=65.45 Aligned_cols=135 Identities=15% Similarity=0.205 Sum_probs=70.7
Q ss_pred hHHHhhHHHHHHHHHHH-HHHHHHHHHhhhhcCCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEe
Q 017747 17 SYARNSSLQKKASDTVK-HITLEALQQLYLEIDPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYL 95 (366)
Q Consensus 17 sY~~nS~~Q~~~~~~~~-~~l~~ai~~l~~~~~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~ 95 (366)
||+..+.-+.-+-+... ..-++||..-.. .-+.-+|+|+|||+|..|+.. .+. |. -+|+.
T Consensus 51 sY~~~~iH~~ML~D~~Rt~aY~~Ai~~~~~--~~~~k~VLDvG~GtGiLs~~A--------a~a-----GA----~~V~a 111 (376)
T 4hc4_A 51 CYSDVSVHEEMIADRVRTDAYRLGILRNWA--ALRGKTVLDVGAGTGILSIFC--------AQA-----GA----RRVYA 111 (376)
T ss_dssp CHHHHHHHHHHHHCHHHHHHHHHHHHTTHH--HHTTCEEEEETCTTSHHHHHH--------HHT-----TC----SEEEE
T ss_pred hccCcHHHHHHhCCHHHHHHHHHHHHhCHH--hcCCCEEEEeCCCccHHHHHH--------HHh-----CC----CEEEE
Confidence 77777655443333221 122333321100 012357999999999888742 111 21 57899
Q ss_pred cCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce-EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCC
Q 017747 96 NDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV-YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGES 174 (366)
Q Consensus 96 nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~-f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~ 174 (366)
.|.. +... ..+ .....+|.. ..+ ++. |+. +.+-.++.+|+++|- |+... +..
T Consensus 112 ve~s-~~~~-~a~-------~~~~~n~~~--~~i~~i~---~~~-~~~~lpe~~DvivsE----~~~~~---l~~----- 164 (376)
T 4hc4_A 112 VEAS-AIWQ-QAR-------EVVRFNGLE--DRVHVLP---GPV-ETVELPEQVDAIVSE----WMGYG---LLH----- 164 (376)
T ss_dssp EECS-TTHH-HHH-------HHHHHTTCT--TTEEEEE---SCT-TTCCCSSCEEEEECC----CCBTT---BTT-----
T ss_pred EeCh-HHHH-HHH-------HHHHHcCCC--ceEEEEe---eee-eeecCCccccEEEee----ccccc---ccc-----
Confidence 9964 2222 111 111222321 223 333 344 445445789999994 33221 111
Q ss_pred CccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEE
Q 017747 175 INKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVL 221 (366)
Q Consensus 175 ~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~lvl 221 (366)
+..+..+|.+|.+=|+|||+|+-
T Consensus 165 ------------------------e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 165 ------------------------ESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp ------------------------TCSHHHHHHHHHHHEEEEEEEES
T ss_pred ------------------------cchhhhHHHHHHhhCCCCceECC
Confidence 12345678899999999999874
|
| >1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00079 Score=60.20 Aligned_cols=36 Identities=14% Similarity=0.086 Sum_probs=25.5
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPT 100 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~ 100 (366)
...+|+|+|||+|..+..+.+.+ | |..+|+..|...
T Consensus 73 ~~~~vLDlG~G~G~~~~~la~~~------------~---~~~~v~~vD~s~ 108 (227)
T 1g8a_A 73 PGKSVLYLGIASGTTASHVSDIV------------G---WEGKIFGIEFSP 108 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHHHHH------------C---TTSEEEEEESCH
T ss_pred CCCEEEEEeccCCHHHHHHHHHh------------C---CCeEEEEEECCH
Confidence 35799999999999987543322 1 236788888764
|
| >1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00037 Score=64.65 Aligned_cols=76 Identities=12% Similarity=0.044 Sum_probs=43.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++.+.+.+ .|..+++..|+.......+-+.+. . .+. ..++
T Consensus 112 ~~~~VLDiG~G~G~~~~~la~~~---------------~~~~~v~~vD~s~~~~~~a~~~~~-------~-~~~--~~~v 166 (277)
T 1o54_A 112 EGDRIIDTGVGSGAMCAVLARAV---------------GSSGKVFAYEKREEFAKLAESNLT-------K-WGL--IERV 166 (277)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHT---------------TTTCEEEEECCCHHHHHHHHHHHH-------H-TTC--GGGE
T ss_pred CCCEEEEECCcCCHHHHHHHHHh---------------CCCcEEEEEECCHHHHHHHHHHHH-------H-cCC--CCCE
Confidence 35799999999999987532221 234789999985432222221111 0 111 0122
Q ss_pred EEeccCCCcccccCCCCcccEEEc
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHS 153 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S 153 (366)
- .+.+++.+. +|++++|++++
T Consensus 167 ~--~~~~d~~~~-~~~~~~D~V~~ 187 (277)
T 1o54_A 167 T--IKVRDISEG-FDEKDVDALFL 187 (277)
T ss_dssp E--EECCCGGGC-CSCCSEEEEEE
T ss_pred E--EEECCHHHc-ccCCccCEEEE
Confidence 1 223566444 78889999997
|
| >2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46 | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00037 Score=61.76 Aligned_cols=77 Identities=10% Similarity=0.044 Sum_probs=44.4
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce-
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV- 129 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~- 129 (366)
..+|+|+|||+|..++.++ .+ + . .+|+..|+.......+-+.+. . .+ ..++
T Consensus 55 ~~~vLDlgcG~G~~~~~l~--------~~-----~---~-~~V~~vD~s~~~l~~a~~~~~-------~-~~---~~~v~ 106 (202)
T 2fpo_A 55 DAQCLDCFAGSGALGLEAL--------SR-----Y---A-AGATLIEMDRAVSQQLIKNLA-------T-LK---AGNAR 106 (202)
T ss_dssp TCEEEETTCTTCHHHHHHH--------HT-----T---C-SEEEEECSCHHHHHHHHHHHH-------H-TT---CCSEE
T ss_pred CCeEEEeCCCcCHHHHHHH--------hc-----C---C-CEEEEEECCHHHHHHHHHHHH-------H-cC---CCcEE
Confidence 4789999999999987421 11 1 1 478999986543333322111 1 11 1122
Q ss_pred EEeccCCCccccc-CCCCcccEEEcccccc
Q 017747 130 YIAGYPGSFYGRL-FPNNSLHFIHSSNSLH 158 (366)
Q Consensus 130 f~~~vpgSFy~~l-fp~~s~~~~~S~~alh 158 (366)
|+. +++.+-+ .+++++|++++...+|
T Consensus 107 ~~~---~D~~~~~~~~~~~fD~V~~~~p~~ 133 (202)
T 2fpo_A 107 VVN---SNAMSFLAQKGTPHNIVFVDPPFR 133 (202)
T ss_dssp EEC---SCHHHHHSSCCCCEEEEEECCSSS
T ss_pred EEE---CCHHHHHhhcCCCCCEEEECCCCC
Confidence 333 4554433 3567899999865544
|
| >2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00033 Score=63.62 Aligned_cols=76 Identities=11% Similarity=0.077 Sum_probs=44.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+...+ .|..+++..|+.......+-+.+ ....|. .++
T Consensus 96 ~~~~vLdiG~G~G~~~~~l~~~~---------------~~~~~v~~~D~~~~~~~~a~~~~-------~~~~g~---~~v 150 (258)
T 2pwy_A 96 PGMRVLEAGTGSGGLTLFLARAV---------------GEKGLVESYEARPHHLAQAERNV-------RAFWQV---ENV 150 (258)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHH---------------CTTSEEEEEESCHHHHHHHHHHH-------HHHCCC---CCE
T ss_pred CCCEEEEECCCcCHHHHHHHHHh---------------CCCCEEEEEeCCHHHHHHHHHHH-------HHhcCC---CCE
Confidence 45799999999999987543322 23368899998543222222111 111011 122
Q ss_pred -EEeccCCCcccccCCCCcccEEEc
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHS 153 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S 153 (366)
+.. +++.+.-+|++++|++++
T Consensus 151 ~~~~---~d~~~~~~~~~~~D~v~~ 172 (258)
T 2pwy_A 151 RFHL---GKLEEAELEEAAYDGVAL 172 (258)
T ss_dssp EEEE---SCGGGCCCCTTCEEEEEE
T ss_pred EEEE---CchhhcCCCCCCcCEEEE
Confidence 333 466544478889999997
|
| >1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A* | Back alignment and structure |
|---|
Probab=97.28 E-value=0.0001 Score=63.26 Aligned_cols=101 Identities=21% Similarity=0.260 Sum_probs=59.4
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++.+ .+. . .+++..|........+-+.+ .. .+. ..++
T Consensus 33 ~~~~vldiG~G~G~~~~~l--------~~~--------~--~~v~~~D~~~~~~~~a~~~~-------~~-~~~--~~~~ 84 (192)
T 1l3i_A 33 KNDVAVDVGCGTGGVTLEL--------AGR--------V--RRVYAIDRNPEAISTTEMNL-------QR-HGL--GDNV 84 (192)
T ss_dssp TTCEEEEESCTTSHHHHHH--------HTT--------S--SEEEEEESCHHHHHHHHHHH-------HH-TTC--CTTE
T ss_pred CCCEEEEECCCCCHHHHHH--------HHh--------c--CEEEEEECCHHHHHHHHHHH-------HH-cCC--Ccce
Confidence 4579999999999988642 111 1 67888887543222221111 11 111 0222
Q ss_pred -EEeccCCCcccccCCC-CcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRLFPN-NSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~-~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
+.. +++.+ .+|. +++|+++++..+|++ ..+|+
T Consensus 85 ~~~~---~d~~~-~~~~~~~~D~v~~~~~~~~~------------------------------------------~~~l~ 118 (192)
T 1l3i_A 85 TLME---GDAPE-ALCKIPDIDIAVVGGSGGEL------------------------------------------QEILR 118 (192)
T ss_dssp EEEE---SCHHH-HHTTSCCEEEEEESCCTTCH------------------------------------------HHHHH
T ss_pred EEEe---cCHHH-hcccCCCCCEEEECCchHHH------------------------------------------HHHHH
Confidence 233 35544 3344 689999987654321 23456
Q ss_pred HHHHHhccCceEEEEee
Q 017747 208 SRSEELVVGGRMVLILL 224 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~ 224 (366)
.-.+-|+|||++++...
T Consensus 119 ~~~~~l~~gG~l~~~~~ 135 (192)
T 1l3i_A 119 IIKDKLKPGGRIIVTAI 135 (192)
T ss_dssp HHHHTEEEEEEEEEEEC
T ss_pred HHHHhcCCCcEEEEEec
Confidence 66889999999999864
|
| >3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00087 Score=61.37 Aligned_cols=38 Identities=16% Similarity=0.238 Sum_probs=27.4
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCc
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTND 102 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~ND 102 (366)
++.+|+|+|||+|..|+.+ .+. -++..+|+..|+....
T Consensus 60 ~~~~VLDiG~G~G~~t~~l--------a~~-------~~~~~~v~~iD~~~~~ 97 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAM--------SLA-------LPDDGQVITCDINEGW 97 (242)
T ss_dssp TCSEEEEEESCCSHHHHHH--------HHT-------SCTTCEEEEEECCCSS
T ss_pred CcCEEEEeeCCcCHHHHHH--------HHh-------CCCCCEEEEEECCHHH
Confidence 3579999999999999853 221 1234789999987653
|
| >2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A* | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00069 Score=64.27 Aligned_cols=109 Identities=15% Similarity=0.110 Sum_probs=60.7
Q ss_pred CceEEEeecCCCCcch--HHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCC
Q 017747 50 KTINIADLGCSSGPNT--LAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSP 127 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns--~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~ 127 (366)
...+|+|+|||+|.+. =. .+ +.++ -++..+|+..|+... ++ +
T Consensus 63 ~g~~VLDLGcGsg~~~GpGs---~~---~a~~-------~~~~~~V~gvDis~~--------v~---------------~ 106 (290)
T 2xyq_A 63 YNMRVIHFGAGSDKGVAPGT---AV---LRQW-------LPTGTLLVDSDLNDF--------VS---------------D 106 (290)
T ss_dssp TTCEEEEESCCCTTSBCHHH---HH---HHHH-------SCTTCEEEEEESSCC--------BC---------------S
T ss_pred CCCEEEEeCCCCCCCCCcHH---HH---HHHH-------cCCCCEEEEEECCCC--------CC---------------C
Confidence 4579999999885543 10 11 2222 122478999999653 11 0
Q ss_pred ceE-EeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 128 SVY-IAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 128 ~~f-~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
-.| +. |+..+..+ ++++|+++|+.+.+|...... + + ... ...+...|
T Consensus 107 v~~~i~---gD~~~~~~-~~~fD~Vvsn~~~~~~g~~~~---d------~--------~~~-----------~~l~~~~l 154 (290)
T 2xyq_A 107 ADSTLI---GDCATVHT-ANKWDLIISDMYDPRTKHVTK---E------N--------DSK-----------EGFFTYLC 154 (290)
T ss_dssp SSEEEE---SCGGGCCC-SSCEEEEEECCCCCC---CCS---C------C--------CCC-----------CTHHHHHH
T ss_pred CEEEEE---CccccCCc-cCcccEEEEcCCccccccccc---c------c--------cch-----------HHHHHHHH
Confidence 113 33 45543223 478999999876555211100 0 0 000 01234566
Q ss_pred HHHHHHhccCceEEEEeecC
Q 017747 207 RSRSEELVVGGRMVLILLGR 226 (366)
Q Consensus 207 ~~Ra~EL~~GG~lvl~~~g~ 226 (366)
+.-.+-|+|||+|++..+..
T Consensus 155 ~~a~r~LkpGG~~v~~~~~~ 174 (290)
T 2xyq_A 155 GFIKQKLALGGSIAVKITEH 174 (290)
T ss_dssp HHHHHHEEEEEEEEEEECSS
T ss_pred HHHHHhcCCCcEEEEEEecc
Confidence 77789999999999976543
|
| >3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A* | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00036 Score=64.36 Aligned_cols=101 Identities=18% Similarity=0.168 Sum_probs=60.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++. +... .|..+|+..|........+-+.. ...+ ..++
T Consensus 80 ~~~~vLDiG~G~G~~~i~--------la~~--------~~~~~v~~vD~s~~~~~~a~~~~--------~~~~---l~~v 132 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLP--------LKIV--------RPELELVLVDATRKKVAFVERAI--------EVLG---LKGA 132 (249)
T ss_dssp SSCEEEEETCTTTTTHHH--------HHHH--------CTTCEEEEEESCHHHHHHHHHHH--------HHHT---CSSE
T ss_pred CCCEEEEEcCCCCHHHHH--------HHHH--------CCCCEEEEEECCHHHHHHHHHHH--------HHhC---CCce
Confidence 457999999999999875 2222 24588999998653222221111 1112 2233
Q ss_pred -EEeccCCCcccccC---CCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRLF---PNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLF 205 (366)
Q Consensus 130 -f~~~vpgSFy~~lf---p~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~F 205 (366)
++. ++..+-.. +++++|+++|.... |+..+
T Consensus 133 ~~~~---~d~~~~~~~~~~~~~fD~I~s~a~~-------------------------------------------~~~~l 166 (249)
T 3g89_A 133 RALW---GRAEVLAREAGHREAYARAVARAVA-------------------------------------------PLCVL 166 (249)
T ss_dssp EEEE---CCHHHHTTSTTTTTCEEEEEEESSC-------------------------------------------CHHHH
T ss_pred EEEE---CcHHHhhcccccCCCceEEEECCcC-------------------------------------------CHHHH
Confidence 333 45533222 24899999984210 23345
Q ss_pred HHHHHHHhccCceEEEEe
Q 017747 206 LRSRSEELVVGGRMVLIL 223 (366)
Q Consensus 206 L~~Ra~EL~~GG~lvl~~ 223 (366)
+..-.+-|+|||++++..
T Consensus 167 l~~~~~~LkpgG~l~~~~ 184 (249)
T 3g89_A 167 SELLLPFLEVGGAAVAMK 184 (249)
T ss_dssp HHHHGGGEEEEEEEEEEE
T ss_pred HHHHHHHcCCCeEEEEEe
Confidence 667788999999998765
|
| >1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17 | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00059 Score=63.88 Aligned_cols=114 Identities=15% Similarity=0.091 Sum_probs=66.4
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+++.+|+|+|||+|..+.. +.+ ..+..+|...|+-..-....-+.++.+.. +.. .++
T Consensus 74 ~~~~~VLdiG~G~G~~~~~--------l~~--------~~~~~~v~~vEid~~~v~~ar~~~~~~~~------~~~-~~r 130 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIRE--------ILK--------HPSVKKATLVDIDGKVIEYSKKFLPSIAG------KLD-DPR 130 (275)
T ss_dssp SSCCEEEEESCTTCHHHHH--------HTT--------CTTCSEEEEEESCHHHHHHHHHHCHHHHT------TTT-STT
T ss_pred CCCCEEEEECCchHHHHHH--------HHh--------CCCCceEEEEECCHHHHHHHHHHhHhhcc------ccC-CCc
Confidence 4678999999999998764 211 12347889999865433333333332110 000 122
Q ss_pred e-EEeccCCCccccc-CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYGRL-FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 129 ~-f~~~vpgSFy~~l-fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
+ ++.+ +..+-+ .+++++|++++....+|. .+..+.. ..|+
T Consensus 131 v~v~~~---D~~~~l~~~~~~fD~Ii~d~~~~~~--~~~~l~~---------------------------------~~~~ 172 (275)
T 1iy9_A 131 VDVQVD---DGFMHIAKSENQYDVIMVDSTEPVG--PAVNLFT---------------------------------KGFY 172 (275)
T ss_dssp EEEEES---CSHHHHHTCCSCEEEEEESCSSCCS--CCCCCST---------------------------------THHH
T ss_pred eEEEEC---cHHHHHhhCCCCeeEEEECCCCCCC--cchhhhH---------------------------------HHHH
Confidence 2 3333 433322 246889999997766652 1222211 1355
Q ss_pred HHHHHHhccCceEEEEe
Q 017747 207 RSRSEELVVGGRMVLIL 223 (366)
Q Consensus 207 ~~Ra~EL~~GG~lvl~~ 223 (366)
+.-.+-|+|||+|++..
T Consensus 173 ~~~~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 173 AGIAKALKEDGIFVAQT 189 (275)
T ss_dssp HHHHHHEEEEEEEEEEC
T ss_pred HHHHHhcCCCcEEEEEc
Confidence 66678999999999985
|
| >3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00025 Score=64.24 Aligned_cols=103 Identities=17% Similarity=0.164 Sum_probs=59.5
Q ss_pred eEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce-E
Q 017747 52 INIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV-Y 130 (366)
Q Consensus 52 ~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~-f 130 (366)
.+|+|+|||+|..|+.+ .+.. ++..+|+..|+.......+-+.+. ..|.. ..++ +
T Consensus 58 ~~vLdiG~G~G~~~~~l--------a~~~-------~~~~~v~~vD~~~~~~~~a~~~~~--------~~g~~-~~~i~~ 113 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYI--------LNGL-------ADNTTLTCIDPESEHQRQAKALFR--------EAGYS-PSRVRF 113 (221)
T ss_dssp CEEEEESTTHHHHHHHH--------HHHS-------CTTSEEEEECSCHHHHHHHHHHHH--------HTTCC-GGGEEE
T ss_pred CCEEEEcCCchHHHHHH--------HHhC-------CCCCEEEEEECCHHHHHHHHHHHH--------HcCCC-cCcEEE
Confidence 48999999999999853 2221 234789999986543222221111 11110 0123 3
Q ss_pred EeccCCCccccc--CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 131 IAGYPGSFYGRL--FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 131 ~~~vpgSFy~~l--fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
+. |+..+-+ ++++++|++|+... . .++..||+.
T Consensus 114 ~~---gda~~~l~~~~~~~fD~V~~d~~--------~----------------------------------~~~~~~l~~ 148 (221)
T 3dr5_A 114 LL---SRPLDVMSRLANDSYQLVFGQVS--------P----------------------------------MDLKALVDA 148 (221)
T ss_dssp EC---SCHHHHGGGSCTTCEEEEEECCC--------T----------------------------------TTHHHHHHH
T ss_pred EE---cCHHHHHHHhcCCCcCeEEEcCc--------H----------------------------------HHHHHHHHH
Confidence 33 4554433 34789999986421 0 012235566
Q ss_pred HHHHhccCceEEEEe
Q 017747 209 RSEELVVGGRMVLIL 223 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~ 223 (366)
-.+-|+|||++++..
T Consensus 149 ~~~~LkpGG~lv~dn 163 (221)
T 3dr5_A 149 AWPLLRRGGALVLAD 163 (221)
T ss_dssp HHHHEEEEEEEEETT
T ss_pred HHHHcCCCcEEEEeC
Confidence 678999999999853
|
| >2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A* | Back alignment and structure |
|---|
Probab=97.21 E-value=0.00052 Score=65.35 Aligned_cols=116 Identities=11% Similarity=0.032 Sum_probs=65.1
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+.+.+|+|+|||+|..+..+ .+ ..+..+++..|+........-+.++.+...+. .++
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l--------~~--------~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~-------~~r 150 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREV--------VK--------HPSVESVVQCEIDEDVIQVSKKFLPGMAIGYS-------SSK 150 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHH--------TT--------CTTCCEEEEEESCHHHHHHHHHHCHHHHGGGG-------CTT
T ss_pred CCCCEEEEECCCchHHHHHH--------HH--------cCCCCEEEEEECCHHHHHHHHHHhHHhhcccC-------CCc
Confidence 45689999999999988642 11 12347899999865433333333332111110 122
Q ss_pred e-EEeccCCCccccc-CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYGRL-FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 129 ~-f~~~vpgSFy~~l-fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
+ ++. ++..+-+ .+++++|++++....+|- |... -....|+
T Consensus 151 v~v~~---~Da~~~l~~~~~~fD~Ii~d~~~~~~---~~~~--------------------------------l~~~~~l 192 (304)
T 2o07_A 151 LTLHV---GDGFEFMKQNQDAFDVIITDSSDPMG---PAES--------------------------------LFKESYY 192 (304)
T ss_dssp EEEEE---SCHHHHHHTCSSCEEEEEEECC----------------------------------------------CHHH
T ss_pred EEEEE---CcHHHHHhhCCCCceEEEECCCCCCC---cchh--------------------------------hhHHHHH
Confidence 2 333 3443322 356889999997655541 1100 0113466
Q ss_pred HHHHHHhccCceEEEEeec
Q 017747 207 RSRSEELVVGGRMVLILLG 225 (366)
Q Consensus 207 ~~Ra~EL~~GG~lvl~~~g 225 (366)
+.-.+-|+|||+|++....
T Consensus 193 ~~~~~~LkpgG~lv~~~~~ 211 (304)
T 2o07_A 193 QLMKTALKEDGVLCCQGEC 211 (304)
T ss_dssp HHHHHHEEEEEEEEEEEEC
T ss_pred HHHHhccCCCeEEEEecCC
Confidence 7778999999999998643
|
| >2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.21 E-value=0.00068 Score=68.69 Aligned_cols=128 Identities=16% Similarity=0.101 Sum_probs=72.5
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..|..+...+ .+.-+|+.+|+.......+-+.+. . .| ..++
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~---------------~~~g~V~avDis~~~l~~~~~n~~-------r-~g---~~nv 170 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARM---------------NNEGAILANEFSASRVKVLHANIS-------R-CG---ISNV 170 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHT---------------TTCSEEEEECSSHHHHHHHHHHHH-------H-HT---CCSE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhC---------------CCCCEEEEEECCHHHHHHHHHHHH-------H-cC---CCcE
Confidence 35799999999999998633221 123789999997654433332221 1 12 1233
Q ss_pred -EEeccCCCcccccC-CCCcccEEEc---ccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRLF-PNNSLHFIHS---SNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTL 204 (366)
Q Consensus 130 -f~~~vpgSFy~~lf-p~~s~~~~~S---~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~ 204 (366)
++.+ +...-.. +++++|.+++ ++...-+.+.|..... .++.. .....+.-..
T Consensus 171 ~~~~~---D~~~~~~~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~---------------~~~~~-----~~~l~~~q~~ 227 (479)
T 2frx_A 171 ALTHF---DGRVFGAAVPEMFDAILLDAPCSGEGVVRKDPDALKN---------------WSPES-----NQEIAATQRE 227 (479)
T ss_dssp EEECC---CSTTHHHHSTTCEEEEEEECCCCCGGGGGTCTTSSSS---------------CCHHH-----HHHHHHHHHH
T ss_pred EEEeC---CHHHhhhhccccCCEEEECCCcCCcccccCCHHHHhh---------------cCHhH-----HHHHHHHHHH
Confidence 3333 3322111 4678999997 3444444444543211 11111 1222333456
Q ss_pred HHHHHHHHhccCceEEEEeecC
Q 017747 205 FLRSRSEELVVGGRMVLILLGR 226 (366)
Q Consensus 205 FL~~Ra~EL~~GG~lvl~~~g~ 226 (366)
+|..-.+-|+|||+||.+++..
T Consensus 228 iL~~a~~~LkpGG~LvysTcs~ 249 (479)
T 2frx_A 228 LIDSAFHALRPGGTLVYSTCTL 249 (479)
T ss_dssp HHHHHHHHEEEEEEEEEEESCC
T ss_pred HHHHHHHhcCCCCEEEEecccC
Confidence 7888889999999999987644
|
| >2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A* | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00086 Score=63.01 Aligned_cols=112 Identities=13% Similarity=-0.041 Sum_probs=61.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..|..+ .+ . -+|+..|+.. +-..+ +..+ ... ...+ .+-.
T Consensus 82 ~g~~VLDlGcGtG~~s~~l--------a~---------~--~~V~gVD~s~-m~~~a-~~~~-----~~~-~~~~-~~v~ 133 (276)
T 2wa2_A 82 LKGTVVDLGCGRGSWSYYA--------AS---------Q--PNVREVKAYT-LGTSG-HEKP-----RLV-ETFG-WNLI 133 (276)
T ss_dssp CCEEEEEESCTTCHHHHHH--------HT---------S--TTEEEEEEEC-CCCTT-SCCC-----CCC-CCTT-GGGE
T ss_pred CCCEEEEeccCCCHHHHHH--------HH---------c--CCEEEEECch-hhhhh-hhch-----hhh-hhcC-CCeE
Confidence 3579999999999988642 11 1 4677777754 21100 0000 000 0000 0123
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
|+.. -+++.. +|++++|+++|..+ ++... | ..+ .+. .+ ..|..-
T Consensus 134 ~~~~-~~D~~~--l~~~~fD~Vvsd~~-~~~~~-~--~~d-----------------------~~~-----~l-~~L~~~ 177 (276)
T 2wa2_A 134 TFKS-KVDVTK--MEPFQADTVLCDIG-ESNPT-A--AVE-----------------------ASR-----TL-TVLNVI 177 (276)
T ss_dssp EEEC-SCCGGG--CCCCCCSEEEECCC-CCCSC-H--HHH-----------------------HHH-----HH-HHHHHH
T ss_pred EEec-cCcHhh--CCCCCcCEEEECCC-cCCCc-h--hhh-----------------------HHH-----HH-HHHHHH
Confidence 4410 245544 57889999999887 55221 1 111 000 01 156677
Q ss_pred HHHhccCc--eEEEEeec
Q 017747 210 SEELVVGG--RMVLILLG 225 (366)
Q Consensus 210 a~EL~~GG--~lvl~~~g 225 (366)
.+-|+||| .|++..+.
T Consensus 178 ~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 178 SRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp HHHHHHSTTCEEEEEESC
T ss_pred HHHhccCCCcEEEEEeCC
Confidence 78899999 99997766
|
| >2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00066 Score=61.90 Aligned_cols=122 Identities=21% Similarity=0.263 Sum_probs=64.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCC--CCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGG--GSSP 127 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~--~~~~ 127 (366)
+..+|+|+|||+|..++. +.+. .|..+|+..|........+-+.+.. ....... + ..
T Consensus 49 ~~~~vLDiGcG~G~~~~~--------la~~--------~~~~~v~gvD~s~~~l~~a~~~~~~----~~~~~~~~~~-~~ 107 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMID--------LSPA--------FPEDLILGMEIRVQVTNYVEDRIIA----LRNNTASKHG-FQ 107 (246)
T ss_dssp CCEEEEEETCTTSHHHHH--------HHHH--------STTSEEEEEESCHHHHHHHHHHHHH----HHHTC-CCST-TT
T ss_pred CCCEEEEEcCCCCHHHHH--------HHHh--------CCCCCEEEEEcCHHHHHHHHHHHHH----HhhccccccC-CC
Confidence 457899999999999875 2222 2447899999865433222221110 0000000 0 22
Q ss_pred ce-EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 128 SV-YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 128 ~~-f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
++ ++.+-...+....++.+++|.++....-.|....- .+.++ + -..||
T Consensus 108 nv~~~~~D~~~~l~~~~~~~~~d~v~~~~p~p~~k~~~-----------~~~r~---------~-----------~~~~l 156 (246)
T 2vdv_E 108 NINVLRGNAMKFLPNFFEKGQLSKMFFCFPDPHFKQRK-----------HKARI---------I-----------TNTLL 156 (246)
T ss_dssp TEEEEECCTTSCGGGTSCTTCEEEEEEESCCCC-----------------CSSC---------C-----------CHHHH
T ss_pred cEEEEeccHHHHHHHhccccccCEEEEECCCcccccch-----------hHHhh---------c-----------cHHHH
Confidence 33 44443333344568899999998443222211000 00000 0 02456
Q ss_pred HHHHHHhccCceEEEEe
Q 017747 207 RSRSEELVVGGRMVLIL 223 (366)
Q Consensus 207 ~~Ra~EL~~GG~lvl~~ 223 (366)
..-++-|+|||+|++.+
T Consensus 157 ~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 157 SEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp HHHHHHEEEEEEEEEEE
T ss_pred HHHHHHcCCCCEEEEEe
Confidence 77789999999999964
|
| >2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A* | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00064 Score=63.86 Aligned_cols=115 Identities=13% Similarity=0.013 Sum_probs=65.6
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+++.+|+|+|||+|..+..+ .+ ..|..+++..|+........-+.++.+...+. .++
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l--------~~--------~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~-------~~~ 133 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIREL--------CK--------YKSVENIDICEIDETVIEVSKIYFKNISCGYE-------DKR 133 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHH--------TT--------CTTCCEEEEEESCHHHHHHHHHHCTTTSGGGG-------STT
T ss_pred CCCCeEEEEeCCcCHHHHHH--------HH--------cCCCCEEEEEECCHHHHHHHHHHhHHhccccC-------CCc
Confidence 45789999999999988642 11 12347899999865333333333332110000 122
Q ss_pred e-EEeccCCCccccc-CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYGRL-FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 129 ~-f~~~vpgSFy~~l-fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
+ ++.+ +..+-+ ..++++|++++....+|.. +..+.. ..|+
T Consensus 134 v~~~~~---D~~~~l~~~~~~fD~Ii~d~~~~~~~--~~~l~~---------------------------------~~~l 175 (283)
T 2i7c_A 134 VNVFIE---DASKFLENVTNTYDVIIVDSSDPIGP--AETLFN---------------------------------QNFY 175 (283)
T ss_dssp EEEEES---CHHHHHHHCCSCEEEEEEECCCTTTG--GGGGSS---------------------------------HHHH
T ss_pred EEEEEC---ChHHHHHhCCCCceEEEEcCCCCCCc--chhhhH---------------------------------HHHH
Confidence 2 3333 333222 1367899999876555421 111100 3567
Q ss_pred HHHHHHhccCceEEEEee
Q 017747 207 RSRSEELVVGGRMVLILL 224 (366)
Q Consensus 207 ~~Ra~EL~~GG~lvl~~~ 224 (366)
+.-.+-|+|||+|++...
T Consensus 176 ~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 176 EKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp HHHHHHEEEEEEEEEECC
T ss_pred HHHHHhcCCCcEEEEECC
Confidence 778899999999998853
|
| >2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus} | Back alignment and structure |
|---|
Probab=97.15 E-value=0.00088 Score=62.54 Aligned_cols=112 Identities=16% Similarity=0.039 Sum_probs=60.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..|..+. + . -+|+..|+.. +-..+ +..+.. ....+ .+-.
T Consensus 74 ~g~~VLDlGcGtG~~s~~la--------~---------~--~~V~gvD~s~-m~~~a-~~~~~~----~~~~~---~~v~ 125 (265)
T 2oxt_A 74 LTGRVVDLGCGRGGWSYYAA--------S---------R--PHVMDVRAYT-LGVGG-HEVPRI----TESYG---WNIV 125 (265)
T ss_dssp CCEEEEEESCTTSHHHHHHH--------T---------S--TTEEEEEEEC-CCCSS-CCCCCC----CCBTT---GGGE
T ss_pred CCCEEEEeCcCCCHHHHHHH--------H---------c--CcEEEEECch-hhhhh-hhhhhh----hhccC---CCeE
Confidence 35799999999999886421 1 1 4577777744 21000 000000 00000 0123
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
|+.. -+++.. +|++++|+++|..+ +.... | ..+ .. +.+ ..|...
T Consensus 126 ~~~~-~~D~~~--l~~~~fD~V~sd~~-~~~~~-~--~~d-----------------------~~-----~~l-~~L~~~ 169 (265)
T 2oxt_A 126 KFKS-RVDIHT--LPVERTDVIMCDVG-ESSPK-W--SVE-----------------------SE-----RTI-KILELL 169 (265)
T ss_dssp EEEC-SCCTTT--SCCCCCSEEEECCC-CCCSC-H--HHH-----------------------HH-----HHH-HHHHHH
T ss_pred EEec-ccCHhH--CCCCCCcEEEEeCc-ccCCc-c--chh-----------------------HH-----HHH-HHHHHH
Confidence 4411 245544 57889999999877 55221 1 111 00 001 156677
Q ss_pred HHHhccCc--eEEEEeec
Q 017747 210 SEELVVGG--RMVLILLG 225 (366)
Q Consensus 210 a~EL~~GG--~lvl~~~g 225 (366)
.+-|+||| .+++..+.
T Consensus 170 ~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 170 EKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp HHHHHHCTTCEEEEEESC
T ss_pred HHHhccCCCeEEEEEeCC
Confidence 78999999 99997766
|
| >3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A* | Back alignment and structure |
|---|
Probab=97.15 E-value=0.00044 Score=61.62 Aligned_cols=37 Identities=14% Similarity=0.100 Sum_probs=26.5
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTN 101 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~N 101 (366)
.+.+|+|+|||+|..++.+ .+. -++..+|+..|+...
T Consensus 58 ~~~~vLdiG~G~G~~~~~l--------a~~-------~~~~~~v~~vD~~~~ 94 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWL--------ARG-------LSSGGRVVTLEASEK 94 (223)
T ss_dssp TCSEEEEECCTTSHHHHHH--------HTT-------CCSSCEEEEEESCHH
T ss_pred CCCEEEEecCCccHHHHHH--------HHh-------CCCCCEEEEEECCHH
Confidence 3579999999999998752 221 122578999998653
|
| >1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A | Back alignment and structure |
|---|
Probab=97.08 E-value=0.00039 Score=69.16 Aligned_cols=126 Identities=17% Similarity=0.151 Sum_probs=73.5
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceE
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVY 130 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 130 (366)
..+|+|+|||+|..|..+ .+. .+..+|+.+|........+-+.+. . .| ....+
T Consensus 247 g~~VLDlgaG~G~~t~~l--------a~~--------~~~~~v~a~D~~~~~l~~~~~~~~-------~-~g---~~~~~ 299 (429)
T 1sqg_A 247 GEHILDLCAAPGGKTTHI--------LEV--------APEAQVVAVDIDEQRLSRVYDNLK-------R-LG---MKATV 299 (429)
T ss_dssp TCEEEEESCTTCHHHHHH--------HHH--------CTTCEEEEEESSTTTHHHHHHHHH-------H-TT---CCCEE
T ss_pred cCeEEEECCCchHHHHHH--------HHH--------cCCCEEEEECCCHHHHHHHHHHHH-------H-cC---CCeEE
Confidence 479999999999999853 222 122789999997765544433221 1 11 11223
Q ss_pred EeccCCCccccc--CCCCcccEEEc---ccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 017747 131 IAGYPGSFYGRL--FPNNSLHFIHS---SNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLF 205 (366)
Q Consensus 131 ~~~vpgSFy~~l--fp~~s~~~~~S---~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~F 205 (366)
+. +++..-. ++++++|.+++ ++....+.+.|..... .++..+ ....+....+
T Consensus 300 ~~---~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~---------------~~~~~~-----~~l~~~q~~~ 356 (429)
T 1sqg_A 300 KQ---GDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWL---------------RRDRDI-----PELAQLQSEI 356 (429)
T ss_dssp EE---CCTTCTHHHHTTCCEEEEEEECCCCCGGGTTTCTTHHHH---------------CCTTHH-----HHHHHHHHHH
T ss_pred Ee---CchhhchhhcccCCCCEEEEeCCCCcccccCCCcchhhc---------------CCHHHH-----HHHHHHHHHH
Confidence 33 3443222 56789999986 3444444454442111 011111 2233344677
Q ss_pred HHHHHHHhccCceEEEEeecC
Q 017747 206 LRSRSEELVVGGRMVLILLGR 226 (366)
Q Consensus 206 L~~Ra~EL~~GG~lvl~~~g~ 226 (366)
|..-.+-|+|||+|+++.+..
T Consensus 357 L~~a~~~LkpGG~lvystcs~ 377 (429)
T 1sqg_A 357 LDAIWPHLKTGGTLVYATCSV 377 (429)
T ss_dssp HHHHGGGEEEEEEEEEEESCC
T ss_pred HHHHHHhcCCCCEEEEEECCC
Confidence 888889999999999987544
|
| >2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A* | Back alignment and structure |
|---|
Probab=97.08 E-value=0.00086 Score=64.27 Aligned_cols=114 Identities=12% Similarity=-0.005 Sum_probs=65.1
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+.+.+|+|+|||+|..+..+ .+ ..|..+++..|+........-+.++.+...+. .++
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l--------~~--------~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~-------~~~ 171 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIREL--------CK--------YKSVENIDICEIDETVIEVSKIYFKNISCGYE-------DKR 171 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHH--------TT--------CTTCCEEEEEESCHHHHHHHHHHCTTTSGGGG-------STT
T ss_pred CCCCEEEEEcCCccHHHHHH--------HH--------cCCCCEEEEEECCHHHHHHHHHHHHhhccccC-------CCc
Confidence 45689999999999988642 11 12447899999865433333333332100000 112
Q ss_pred e-EEeccCCCccccc-CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYGRL-FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 129 ~-f~~~vpgSFy~~l-fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
+ ++. ++..+-+ .+++++|++++...-+|- .+..+ | -..|+
T Consensus 172 v~~~~---~D~~~~l~~~~~~fDvIi~d~~~p~~--~~~~l--------------------------~-------~~~~l 213 (321)
T 2pt6_A 172 VNVFI---EDASKFLENVTNTYDVIIVDSSDPIG--PAETL--------------------------F-------NQNFY 213 (321)
T ss_dssp EEEEE---SCHHHHHHHCCSCEEEEEEECCCSSS--GGGGG--------------------------S-------SHHHH
T ss_pred EEEEE---ccHHHHHhhcCCCceEEEECCcCCCC--cchhh--------------------------h-------HHHHH
Confidence 2 333 3443322 246789999987543330 00000 0 03566
Q ss_pred HHHHHHhccCceEEEEe
Q 017747 207 RSRSEELVVGGRMVLIL 223 (366)
Q Consensus 207 ~~Ra~EL~~GG~lvl~~ 223 (366)
+.-.+-|+|||++++..
T Consensus 214 ~~~~~~LkpgG~lv~~~ 230 (321)
T 2pt6_A 214 EKIYNALKPNGYCVAQC 230 (321)
T ss_dssp HHHHHHEEEEEEEEEEE
T ss_pred HHHHHhcCCCcEEEEEc
Confidence 77789999999999985
|
| >3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0011 Score=63.87 Aligned_cols=116 Identities=18% Similarity=0.109 Sum_probs=68.4
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++.+.... .|..+++..|+.......+-+.+. ..|. ..-.
T Consensus 203 ~~~~vLD~gcGsG~~~ie~a~~~---------------~~~~~v~g~Di~~~~i~~a~~n~~--------~~g~--~~i~ 257 (354)
T 3tma_A 203 PGMRVLDPFTGSGTIALEAASTL---------------GPTSPVYAGDLDEKRLGLAREAAL--------ASGL--SWIR 257 (354)
T ss_dssp TTCCEEESSCTTSHHHHHHHHHH---------------CTTSCEEEEESCHHHHHHHHHHHH--------HTTC--TTCE
T ss_pred CCCEEEeCCCCcCHHHHHHHHhh---------------CCCceEEEEECCHHHHHHHHHHHH--------HcCC--CceE
Confidence 35789999999999887532211 134789999986533222221111 1111 1112
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
|.. +++.+-..|.+++|+++++--.+|... .. .........+++.-
T Consensus 258 ~~~---~D~~~~~~~~~~~D~Ii~npPyg~r~~-----------------------~~--------~~~~~~~~~~~~~~ 303 (354)
T 3tma_A 258 FLR---ADARHLPRFFPEVDRILANPPHGLRLG-----------------------RK--------EGLFHLYWDFLRGA 303 (354)
T ss_dssp EEE---CCGGGGGGTCCCCSEEEECCCSCC---------------------------C--------HHHHHHHHHHHHHH
T ss_pred EEe---CChhhCccccCCCCEEEECCCCcCccC-----------------------Cc--------ccHHHHHHHHHHHH
Confidence 333 466555566778899998754443110 00 11234556788888
Q ss_pred HHHhccCceEEEEee
Q 017747 210 SEELVVGGRMVLILL 224 (366)
Q Consensus 210 a~EL~~GG~lvl~~~ 224 (366)
.+-|+|||++++...
T Consensus 304 ~~~LkpgG~l~i~t~ 318 (354)
T 3tma_A 304 LALLPPGGRVALLTL 318 (354)
T ss_dssp HHTSCTTCEEEEEES
T ss_pred HHhcCCCcEEEEEeC
Confidence 899999999999863
|
| >2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17 | Back alignment and structure |
|---|
Probab=97.07 E-value=0.0008 Score=64.39 Aligned_cols=114 Identities=13% Similarity=0.113 Sum_probs=62.5
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+.+.+|+|+|||+|..+..+ .+ ..|..+++..|+........-+.++.....+ . .++
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l--------~~--------~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~------~-~~r 163 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREV--------LK--------HESVEKVTMCEIDEMVIDVAKKFLPGMSCGF------S-HPK 163 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHH--------TT--------CTTCCEEEEECSCHHHHHHHHHHCTTTSGGG------G-CTT
T ss_pred CCCCEEEEEcCCcCHHHHHH--------HH--------cCCCCEEEEEECCHHHHHHHHHHHHHhcccc------C-CCC
Confidence 45689999999999988642 11 1344789999986543333333332110000 0 122
Q ss_pred e-EEeccCCCccccc-CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYGRL-FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 129 ~-f~~~vpgSFy~~l-fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
+ ++. ++..+-+ .+++++|++++...-||- |. ...|. ..|+
T Consensus 164 v~~~~---~D~~~~l~~~~~~fD~Ii~d~~~~~~---~~-------------------------~~l~t-------~~~l 205 (314)
T 2b2c_A 164 LDLFC---GDGFEFLKNHKNEFDVIITDSSDPVG---PA-------------------------ESLFG-------QSYY 205 (314)
T ss_dssp EEEEC---SCHHHHHHHCTTCEEEEEECCC------------------------------------------------HH
T ss_pred EEEEE---ChHHHHHHhcCCCceEEEEcCCCCCC---cc-------------------------hhhhH-------HHHH
Confidence 2 333 3443322 257889999986543331 10 00000 4567
Q ss_pred HHHHHHhccCceEEEEe
Q 017747 207 RSRSEELVVGGRMVLIL 223 (366)
Q Consensus 207 ~~Ra~EL~~GG~lvl~~ 223 (366)
+.-.+-|+|||+|++..
T Consensus 206 ~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 206 ELLRDALKEDGILSSQG 222 (314)
T ss_dssp HHHHHHEEEEEEEEEEC
T ss_pred HHHHhhcCCCeEEEEEC
Confidence 77789999999999986
|
| >2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A | Back alignment and structure |
|---|
Probab=97.06 E-value=0.00097 Score=64.39 Aligned_cols=77 Identities=16% Similarity=0.123 Sum_probs=42.9
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
+..+|+|+|||+|..++.+ .+. +..+|+..|+.. ....+-+ .. +..+. ..++
T Consensus 50 ~~~~VLDiGcGtG~ls~~l--------a~~---------g~~~V~~vD~s~-~~~~a~~-------~~-~~~~l--~~~v 101 (348)
T 2y1w_A 50 KDKIVLDVGCGSGILSFFA--------AQA---------GARKIYAVEAST-MAQHAEV-------LV-KSNNL--TDRI 101 (348)
T ss_dssp TTCEEEEETCTTSHHHHHH--------HHT---------TCSEEEEEECST-HHHHHHH-------HH-HHTTC--TTTE
T ss_pred CcCEEEEcCCCccHHHHHH--------HhC---------CCCEEEEECCHH-HHHHHHH-------HH-HHcCC--CCcE
Confidence 4579999999999988642 121 225899999852 2211111 11 11121 1222
Q ss_pred -EEeccCCCcccccCCCCcccEEEcccccc
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHSSNSLH 158 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S~~alh 158 (366)
++. +++. .+-+++++|+++|...++
T Consensus 102 ~~~~---~d~~-~~~~~~~~D~Ivs~~~~~ 127 (348)
T 2y1w_A 102 VVIP---GKVE-EVSLPEQVDIIISEPMGY 127 (348)
T ss_dssp EEEE---SCTT-TCCCSSCEEEEEECCCBT
T ss_pred EEEE---cchh-hCCCCCceeEEEEeCchh
Confidence 233 4553 333347899999986644
|
| >3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0003 Score=65.62 Aligned_cols=124 Identities=10% Similarity=-0.014 Sum_probs=66.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..|..+ .+.. ....+|+..|+.......+-+.+. . .| ..++
T Consensus 83 ~g~~VLDlgaG~G~~t~~l--------a~~~-------~~~~~v~avD~~~~~l~~~~~~~~-------~-~g---~~~v 136 (274)
T 3ajd_A 83 EDDFILDMCAAPGGKTTHL--------AQLM-------KNKGTIVAVEISKTRTKALKSNIN-------R-MG---VLNT 136 (274)
T ss_dssp TTCEEEETTCTTCHHHHHH--------HHHT-------TTCSEEEEEESCHHHHHHHHHHHH-------H-TT---CCSE
T ss_pred CcCEEEEeCCCccHHHHHH--------HHHc-------CCCCEEEEECCCHHHHHHHHHHHH-------H-hC---CCcE
Confidence 3479999999999999753 2221 112789999986543332222111 1 11 1122
Q ss_pred -EEeccCCCcccccC----CCCcccEEEccc---ccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRLF----PNNSLHFIHSSN---SLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQED 201 (366)
Q Consensus 130 -f~~~vpgSFy~~lf----p~~s~~~~~S~~---alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D 201 (366)
++. +++.+-.. +.+++|.+++.. .+..+.+.|. | ...-.....++
T Consensus 137 ~~~~---~D~~~~~~~~~~~~~~fD~Vl~d~Pcs~~g~~~~~p~---------~---------------~~~~~~~~~~~ 189 (274)
T 3ajd_A 137 IIIN---ADMRKYKDYLLKNEIFFDKILLDAPCSGNIIKDKNRN---------V---------------SEEDIKYCSLR 189 (274)
T ss_dssp EEEE---SCHHHHHHHHHHTTCCEEEEEEEECCC------------------------------------HHHHTGGGTC
T ss_pred EEEe---CChHhcchhhhhccccCCEEEEcCCCCCCcccccCCC---------C---------------CHHHHHHHHHH
Confidence 333 34432222 367899998742 2222222220 0 01111122345
Q ss_pred HHHHHHHHHHHhccCceEEEEeecC
Q 017747 202 FTLFLRSRSEELVVGGRMVLILLGR 226 (366)
Q Consensus 202 ~~~FL~~Ra~EL~~GG~lvl~~~g~ 226 (366)
...+|+.-.+-|+|||+|+++....
T Consensus 190 ~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 190 QKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred HHHHHHHHHHhCCCCCEEEEEECCC
Confidence 5778888899999999999987654
|
| >3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0 | Back alignment and structure |
|---|
Probab=97.03 E-value=0.00096 Score=59.38 Aligned_cols=37 Identities=14% Similarity=0.272 Sum_probs=26.4
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTN 101 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~N 101 (366)
.+.+|+|+|||+|..|+.+ .+. -++..+|+..|+...
T Consensus 64 ~~~~vLdiG~G~G~~~~~l--------a~~-------~~~~~~v~~vD~~~~ 100 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAM--------GLA-------LPKDGTLITCDVDEK 100 (225)
T ss_dssp TCSEEEEECCTTSHHHHHH--------HTT-------CCTTCEEEEEESCHH
T ss_pred CCCEEEEeCCcchHHHHHH--------HHh-------CCCCCEEEEEeCCHH
Confidence 3579999999999998753 221 122588999998653
|
| >2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A* | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0012 Score=62.98 Aligned_cols=22 Identities=14% Similarity=0.083 Sum_probs=17.2
Q ss_pred HHHHHHHHhccCceEEEEeecC
Q 017747 205 FLRSRSEELVVGGRMVLILLGR 226 (366)
Q Consensus 205 FL~~Ra~EL~~GG~lvl~~~g~ 226 (366)
.|..-.+-|+|||.|++.++..
T Consensus 173 ~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 173 VLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp HHHHHHHHCCTTCEEEEEESCC
T ss_pred HHHHHHHHhCCCCEEEEEeCCC
Confidence 5566678999999999976544
|
| >2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0024 Score=57.72 Aligned_cols=36 Identities=14% Similarity=0.199 Sum_probs=25.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPT 100 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~ 100 (366)
...+|+|+|||+|..+..+. +.. ++..+|+..|...
T Consensus 60 ~~~~VLdiG~G~G~~~~~la--------~~~-------~~~~~v~~vD~~~ 95 (239)
T 2hnk_A 60 GAKRIIEIGTFTGYSSLCFA--------SAL-------PEDGKILCCDVSE 95 (239)
T ss_dssp TCSEEEEECCTTCHHHHHHH--------HHS-------CTTCEEEEEESCH
T ss_pred CcCEEEEEeCCCCHHHHHHH--------HhC-------CCCCEEEEEECCH
Confidence 35799999999999997532 221 1236888888754
|
| >3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A* | Back alignment and structure |
|---|
Probab=96.99 E-value=0.00035 Score=70.53 Aligned_cols=128 Identities=16% Similarity=0.107 Sum_probs=71.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..|+.+. +.. ....+|+.+|+.......+-+.+. . .| ..-.
T Consensus 101 ~g~~VLDlgaGpG~kt~~LA--------~~~-------~~~g~V~AvDis~~~l~~a~~n~~-------r-~G---~~v~ 154 (464)
T 3m6w_A 101 PGERVLDLAAAPGGKTTHLA--------ARM-------GGKGLLLANEVDGKRVRGLLENVE-------R-WG---APLA 154 (464)
T ss_dssp TTCEEEESSCTTCHHHHHHH--------HHT-------TTCSEEEEECSCHHHHHHHHHHHH-------H-HC---CCCE
T ss_pred CCCEEEEEcCCcCHHHHHHH--------HhC-------CCCCEEEEEECCHHHHHHHHHHHH-------H-cC---CeEE
Confidence 35799999999999998632 221 123689999987544333322221 1 12 1222
Q ss_pred EEeccCCCccccc-CCCCcccEEEc---ccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRL-FPNNSLHFIHS---SNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLF 205 (366)
Q Consensus 130 f~~~vpgSFy~~l-fp~~s~~~~~S---~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~F 205 (366)
++. ++..+-. ++++++|.+++ ++..--+.+.|..... .++..+ ....+.-..+
T Consensus 155 ~~~---~Da~~l~~~~~~~FD~Il~D~PcSg~G~~rr~pd~~~~---------------~~~~~~-----~~l~~~Q~~i 211 (464)
T 3m6w_A 155 VTQ---APPRALAEAFGTYFHRVLLDAPCSGEGMFRKDREAARH---------------WGPSAP-----KRMAEVQKAL 211 (464)
T ss_dssp EEC---SCHHHHHHHHCSCEEEEEEECCCCCGGGTTTCTTSGGG---------------CCTTHH-----HHHHHHHHHH
T ss_pred EEE---CCHHHhhhhccccCCEEEECCCcCCccccccChHHhhh---------------cCHHHH-----HHHHHHHHHH
Confidence 333 3442222 24678999985 2222223333432211 111112 2223444678
Q ss_pred HHHHHHHhccCceEEEEeecC
Q 017747 206 LRSRSEELVVGGRMVLILLGR 226 (366)
Q Consensus 206 L~~Ra~EL~~GG~lvl~~~g~ 226 (366)
|..-.+-|+|||+||.+++..
T Consensus 212 L~~a~~~LkpGG~LvysTCs~ 232 (464)
T 3m6w_A 212 LAQASRLLGPGGVLVYSTCTF 232 (464)
T ss_dssp HHHHHTTEEEEEEEEEEESCC
T ss_pred HHHHHHhcCCCcEEEEEeccC
Confidence 888889999999999987644
|
| >1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A* | Back alignment and structure |
|---|
Probab=96.98 E-value=0.00098 Score=62.46 Aligned_cols=118 Identities=14% Similarity=0.072 Sum_probs=62.9
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHh--hhcCCCCC
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLR--NERGGGSS 126 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~--~~~~~~~~ 126 (366)
+.+.+|+|+|||+|..+..+ .+ . +..+++..|+........-+.+ .....+. ..... .
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l--------~~--------~-~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~--~ 133 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREV--------LQ--------H-DVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGK--H 133 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHH--------TT--------S-CCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTC--C
T ss_pred CCCCeEEEEcCCcCHHHHHH--------Hh--------C-CCCEEEEEECCHHHHHHHHHHH-hhccccccccccCC--C
Confidence 45689999999999988642 11 2 3368889998653333222222 1100000 00000 1
Q ss_pred Cce-EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 017747 127 PSV-YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLF 205 (366)
Q Consensus 127 ~~~-f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~F 205 (366)
+++ ++.+-...|-.. ++++|++++....||-. +..+. -..|
T Consensus 134 ~~v~~~~~D~~~~l~~---~~~fD~Ii~d~~~~~~~--~~~l~---------------------------------~~~~ 175 (281)
T 1mjf_A 134 EKAKLTIGDGFEFIKN---NRGFDVIIADSTDPVGP--AKVLF---------------------------------SEEF 175 (281)
T ss_dssp SSEEEEESCHHHHHHH---CCCEEEEEEECCCCC-------TT---------------------------------SHHH
T ss_pred CcEEEEECchHHHhcc---cCCeeEEEECCCCCCCc--chhhh---------------------------------HHHH
Confidence 233 333322222222 67899999876555411 11110 1346
Q ss_pred HHHHHHHhccCceEEEEee
Q 017747 206 LRSRSEELVVGGRMVLILL 224 (366)
Q Consensus 206 L~~Ra~EL~~GG~lvl~~~ 224 (366)
++.-.+-|+|||++++...
T Consensus 176 l~~~~~~L~pgG~lv~~~~ 194 (281)
T 1mjf_A 176 YRYVYDALNNPGIYVTQAG 194 (281)
T ss_dssp HHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHhcCCCcEEEEEcC
Confidence 6777899999999999853
|
| >3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae} | Back alignment and structure |
|---|
Probab=96.96 E-value=0.00089 Score=62.59 Aligned_cols=116 Identities=13% Similarity=0.130 Sum_probs=62.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHh----hhcCCC-
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLR----NERGGG- 124 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~----~~~~~~- 124 (366)
...+|+|+|||+|..++. +.+. | . .+|+..|+++.+.-...+ .... ...+..
T Consensus 79 ~~~~vLDlG~G~G~~~~~--------~a~~-----~---~-~~v~~~D~s~~~~~~~a~------~n~~~N~~~~~~~~~ 135 (281)
T 3bzb_A 79 AGKTVCELGAGAGLVSIV--------AFLA-----G---A-DQVVATDYPDPEILNSLE------SNIREHTANSCSSET 135 (281)
T ss_dssp TTCEEEETTCTTSHHHHH--------HHHT-----T---C-SEEEEEECSCHHHHHHHH------HHHHTTCC-------
T ss_pred CCCeEEEecccccHHHHH--------HHHc-----C---C-CEEEEEeCCCHHHHHHHH------HHHHHhhhhhccccc
Confidence 346999999999998864 2221 1 1 489999984222211111 1110 000000
Q ss_pred -CCCce-EEeccCCCcccccC---CCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHH
Q 017747 125 -SSPSV-YIAGYPGSFYGRLF---PNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQ 199 (366)
Q Consensus 125 -~~~~~-f~~~vpgSFy~~lf---p~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~ 199 (366)
...++ +....-++....+. +++++|+++++.++++...
T Consensus 136 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~------------------------------------- 178 (281)
T 3bzb_A 136 VKRASPKVVPYRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQA------------------------------------- 178 (281)
T ss_dssp ---CCCEEEECCTTSCTHHHHHHHSCSSBSEEEEESCCSCGGG-------------------------------------
T ss_pred CCCCCeEEEEecCCCccHHHHhhccCCCCCEEEEeCcccChHH-------------------------------------
Confidence 00122 22222233333333 5789999999888887333
Q ss_pred HHHHHHHHHHHHHhc---c--CceEEEEeecCC
Q 017747 200 EDFTLFLRSRSEELV---V--GGRMVLILLGRI 227 (366)
Q Consensus 200 ~D~~~FL~~Ra~EL~---~--GG~lvl~~~g~~ 227 (366)
...+|+.-.+-|+ | ||++++.+..+.
T Consensus 179 --~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~ 209 (281)
T 3bzb_A 179 --HDALLRSVKMLLALPANDPTAVALVTFTHHR 209 (281)
T ss_dssp --HHHHHHHHHHHBCCTTTCTTCEEEEEECC--
T ss_pred --HHHHHHHHHHHhcccCCCCCCEEEEEEEeee
Confidence 2233455577899 9 999988775543
|
| >2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46 | Back alignment and structure |
|---|
Probab=96.93 E-value=0.00031 Score=60.36 Aligned_cols=79 Identities=6% Similarity=-0.106 Sum_probs=44.4
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++.++ + .+..+|+..|+.......+-+.+. . .+. .+++
T Consensus 44 ~~~~vLD~GcG~G~~~~~~~--------~---------~~~~~v~~vD~~~~~~~~a~~~~~-------~-~~~--~~~~ 96 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLAIEAV--------S---------RGMDKSICIEKNFAALKVIKENIA-------I-TKE--PEKF 96 (187)
T ss_dssp SSCEEEETTCTTCHHHHHHH--------H---------TTCSEEEEEESCHHHHHHHHHHHH-------H-HTC--GGGE
T ss_pred CCCCEEEeCCccCHHHHHHH--------H---------cCCCEEEEEECCHHHHHHHHHHHH-------H-hCC--Ccce
Confidence 45799999999999987421 1 112689999986533222222111 1 111 0122
Q ss_pred -EEeccCCCccccc----CCCCcccEEEcccccc
Q 017747 130 -YIAGYPGSFYGRL----FPNNSLHFIHSSNSLH 158 (366)
Q Consensus 130 -f~~~vpgSFy~~l----fp~~s~~~~~S~~alh 158 (366)
++. +++.+.+ ++++++|++++...+|
T Consensus 97 ~~~~---~d~~~~~~~~~~~~~~fD~i~~~~~~~ 127 (187)
T 2fhp_A 97 EVRK---MDANRALEQFYEEKLQFDLVLLDPPYA 127 (187)
T ss_dssp EEEE---SCHHHHHHHHHHTTCCEEEEEECCCGG
T ss_pred EEEE---CcHHHHHHHHHhcCCCCCEEEECCCCC
Confidence 333 4554422 2378999999876544
|
| >2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A* | Back alignment and structure |
|---|
Probab=96.88 E-value=0.00097 Score=62.30 Aligned_cols=102 Identities=9% Similarity=-0.070 Sum_probs=60.4
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce-
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV- 129 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~- 129 (366)
..+|+|+|||+|..|+.+ .+. + +. +|+..|+.......+-+.+ .. ++. .+.+
T Consensus 126 ~~~VLDlgcG~G~~~~~l--------a~~-----~---~~-~V~~vD~s~~~~~~a~~n~-------~~-n~~--~~~v~ 178 (278)
T 2frn_A 126 DELVVDMFAGIGHLSLPI--------AVY-----G---KA-KVIAIEKDPYTFKFLVENI-------HL-NKV--EDRMS 178 (278)
T ss_dssp TCEEEETTCTTTTTHHHH--------HHH-----T---CC-EEEEECCCHHHHHHHHHHH-------HH-TTC--TTTEE
T ss_pred CCEEEEecccCCHHHHHH--------HHh-----C---CC-EEEEEECCHHHHHHHHHHH-------HH-cCC--CceEE
Confidence 579999999999999753 222 1 22 7999998654332222111 11 111 1123
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
|+. ++..+ +.+++++|++++. .|... ..||..-
T Consensus 179 ~~~---~D~~~-~~~~~~fD~Vi~~--------~p~~~-----------------------------------~~~l~~~ 211 (278)
T 2frn_A 179 AYN---MDNRD-FPGENIADRILMG--------YVVRT-----------------------------------HEFIPKA 211 (278)
T ss_dssp EEC---SCTTT-CCCCSCEEEEEEC--------CCSSG-----------------------------------GGGHHHH
T ss_pred EEE---CCHHH-hcccCCccEEEEC--------CchhH-----------------------------------HHHHHHH
Confidence 444 35533 3347899999873 23211 1234455
Q ss_pred HHHhccCceEEEEeecC
Q 017747 210 SEELVVGGRMVLILLGR 226 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~ 226 (366)
.+-|+|||++++.....
T Consensus 212 ~~~LkpgG~l~~~~~~~ 228 (278)
T 2frn_A 212 LSIAKDGAIIHYHNTVP 228 (278)
T ss_dssp HHHEEEEEEEEEEEEEE
T ss_pred HHHCCCCeEEEEEEeec
Confidence 77899999999987664
|
| >3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0015 Score=58.95 Aligned_cols=36 Identities=14% Similarity=0.242 Sum_probs=26.4
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTN 101 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~N 101 (366)
.+.+|+|+|||+|..++.+ .+ ..|..+|+..|+...
T Consensus 71 ~~~~vLDiG~G~G~~~~~l--------a~--------~~~~~~v~~vD~~~~ 106 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQF--------AS--------ISDDIHVTTIERNET 106 (232)
T ss_dssp TCCEEEEECCSSSHHHHHH--------HT--------TCTTCEEEEEECCHH
T ss_pred CCCEEEEEeCchhHHHHHH--------HH--------hCCCCEEEEEECCHH
Confidence 4579999999999998753 11 123588999998643
|
| >3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A* | Back alignment and structure |
|---|
Probab=96.86 E-value=0.00056 Score=64.17 Aligned_cols=138 Identities=15% Similarity=0.152 Sum_probs=78.5
Q ss_pred HHHHHHHHHHhhhhcCCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCch
Q 017747 33 KHITLEALQQLYLEIDPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPD 112 (366)
Q Consensus 33 ~~~l~~ai~~l~~~~~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~ 112 (366)
+|.++.-...+.... +.+.+|+|+|||.|+.|+.+ -...|..+++..|.-...-.-+-..+
T Consensus 116 Lp~lD~fY~~i~~~i-~~p~~VLDLGCG~GpLAl~~----------------~~~~p~a~y~a~DId~~~le~a~~~l-- 176 (281)
T 3lcv_B 116 LPHLDEFYRELFRHL-PRPNTLRDLACGLNPLAAPW----------------MGLPAETVYIASDIDARLVGFVDEAL-- 176 (281)
T ss_dssp GGGHHHHHHHHGGGS-CCCSEEEETTCTTGGGCCTT----------------TTCCTTCEEEEEESBHHHHHHHHHHH--
T ss_pred hHhHHHHHHHHHhcc-CCCceeeeeccCccHHHHHH----------------HhhCCCCEEEEEeCCHHHHHHHHHHH--
Confidence 444444333333222 45889999999999999742 12346689999998653222221111
Q ss_pred hHHHHhhhcCCCCCCceEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCC------
Q 017747 113 FHRQLRNERGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESS------ 186 (366)
Q Consensus 113 ~~~~~~~~~~~~~~~~~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s------ 186 (366)
...|. +.-+.. .++-... |+...|+++++-++|-|.+-.....-+.-.++|.++|.|+-..
T Consensus 177 ------~~~g~---~~~~~v---~D~~~~~-p~~~~DvaL~lkti~~Le~q~kg~g~~ll~aL~~~~vvVSfp~ksl~Gr 243 (281)
T 3lcv_B 177 ------TRLNV---PHRTNV---ADLLEDR-LDEPADVTLLLKTLPCLETQQRGSGWEVIDIVNSPNIVVTFPTKSLGQR 243 (281)
T ss_dssp ------HHTTC---CEEEEE---CCTTTSC-CCSCCSEEEETTCHHHHHHHSTTHHHHHHHHSSCSEEEEEEECC-----
T ss_pred ------HhcCC---CceEEE---eeecccC-CCCCcchHHHHHHHHHhhhhhhHHHHHHHHHhCCCCEEEeccchhhcCC
Confidence 11111 111222 2443333 7888999999999999966444221133346788888876533
Q ss_pred CHHHHHHHHHHHHHHH
Q 017747 187 PSAVSKAYFKQFQEDF 202 (366)
Q Consensus 187 ~~~v~~ay~~Q~~~D~ 202 (366)
.+...+-|..+|.++.
T Consensus 244 s~gm~~~Y~~~~e~~~ 259 (281)
T 3lcv_B 244 SKGMFQNYSQSFESQA 259 (281)
T ss_dssp --CHHHHHHHHHHHHH
T ss_pred CcchhhHHHHHHHHHH
Confidence 3345566666666554
|
| >2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51 | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0023 Score=61.65 Aligned_cols=118 Identities=13% Similarity=0.104 Sum_probs=66.5
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCC-Cc
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSS-PS 128 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~-~~ 128 (366)
+..+|+|+|||+|..++.+ .+. | .+|+..|+.......+-+.+. . ++.. . .-
T Consensus 153 ~~~~VLDlgcGtG~~sl~l--------a~~-----g-----a~V~~VD~s~~al~~a~~n~~-------~-~gl~-~~~v 205 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVA--------AAA-----G-----AEVTHVDASKKAIGWAKENQV-------L-AGLE-QAPI 205 (332)
T ss_dssp SCCEEEEETCTTCHHHHHH--------HHT-----T-----CEEEEECSCHHHHHHHHHHHH-------H-HTCT-TSCE
T ss_pred CCCcEEEcccccCHHHHHH--------HHc-----C-----CEEEEEECCHHHHHHHHHHHH-------H-cCCC-ccce
Confidence 4579999999999998753 121 1 489999986533222222111 1 1111 1 12
Q ss_pred eEEeccCCCcccccC----CCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLF----PNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTL 204 (366)
Q Consensus 129 ~f~~~vpgSFy~~lf----p~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~ 204 (366)
-|+. ++..+-+. ..+++|++++. .|..-.. .++.++ ...+|...
T Consensus 206 ~~i~---~D~~~~l~~~~~~~~~fD~Ii~d--------PP~~~~~------~~~~~~---------------~~~~~~~~ 253 (332)
T 2igt_A 206 RWIC---EDAMKFIQREERRGSTYDIILTD--------PPKFGRG------THGEVW---------------QLFDHLPL 253 (332)
T ss_dssp EEEC---SCHHHHHHHHHHHTCCBSEEEEC--------CCSEEEC------TTCCEE---------------EHHHHHHH
T ss_pred EEEE---CcHHHHHHHHHhcCCCceEEEEC--------CccccCC------chHHHH---------------HHHHHHHH
Confidence 2444 35443221 15789999874 2221110 011111 12457778
Q ss_pred HHHHHHHHhccCceEEEEeecC
Q 017747 205 FLRSRSEELVVGGRMVLILLGR 226 (366)
Q Consensus 205 FL~~Ra~EL~~GG~lvl~~~g~ 226 (366)
+|+.-.+-|+|||.++++....
T Consensus 254 ll~~~~~~LkpgG~lli~~~~~ 275 (332)
T 2igt_A 254 MLDICREILSPKALGLVLTAYS 275 (332)
T ss_dssp HHHHHHHTBCTTCCEEEEEECC
T ss_pred HHHHHHHhcCcCcEEEEEECCC
Confidence 8888899999999988887654
|
| >2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1 | Back alignment and structure |
|---|
Probab=96.78 E-value=0.002 Score=57.36 Aligned_cols=37 Identities=16% Similarity=0.248 Sum_probs=26.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTN 101 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~N 101 (366)
.+.+|+|+|||+|..++.+ .+. -++..+++..|+...
T Consensus 69 ~~~~vLdiG~G~G~~~~~l--------a~~-------~~~~~~v~~vD~~~~ 105 (229)
T 2avd_A 69 QAKKALDLGTFTGYSALAL--------ALA-------LPADGRVVTCEVDAQ 105 (229)
T ss_dssp TCCEEEEECCTTSHHHHHH--------HTT-------SCTTCEEEEEESCSH
T ss_pred CCCEEEEEcCCccHHHHHH--------HHh-------CCCCCEEEEEECCHH
Confidence 4579999999999998753 221 122478999998653
|
| >3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A* | Back alignment and structure |
|---|
Probab=96.75 E-value=0.00066 Score=62.94 Aligned_cols=115 Identities=10% Similarity=0.021 Sum_probs=66.1
Q ss_pred HHHHHHHHHHhhhhcCCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCch
Q 017747 33 KHITLEALQQLYLEIDPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPD 112 (366)
Q Consensus 33 ~~~l~~ai~~l~~~~~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~ 112 (366)
+|.++.-...++.. +.+-+|+|+|||+|+.++..+ +...++..|+....-+.+-+.+.
T Consensus 90 Lp~ld~fY~~i~~~--~~p~~VLDlGCG~gpLal~~~-------------------~~~~y~a~DId~~~i~~ar~~~~- 147 (253)
T 3frh_A 90 LAELDTLYDFIFSA--ETPRRVLDIACGLNPLALYER-------------------GIASVWGCDIHQGLGDVITPFAR- 147 (253)
T ss_dssp GGGHHHHHHHHTSS--CCCSEEEEETCTTTHHHHHHT-------------------TCSEEEEEESBHHHHHHHHHHHH-
T ss_pred hhhHHHHHHHHhcC--CCCCeEEEecCCccHHHHHhc-------------------cCCeEEEEeCCHHHHHHHHHHHH-
Confidence 45555444433332 457899999999999987521 34889999996543333222211
Q ss_pred hHHHHhhhcCCCCCCceEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEc
Q 017747 113 FHRQLRNERGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYIS 183 (366)
Q Consensus 113 ~~~~~~~~~~~~~~~~~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~ 183 (366)
..+ .+.-|.. .++.... |+.+.|+++++-++|-|.+-......+---.+|.++|.|+
T Consensus 148 -------~~g---~~~~~~v---~D~~~~~-~~~~~DvvLllk~lh~LE~q~~~~~~~ll~aL~~~~vvVs 204 (253)
T 3frh_A 148 -------EKD---WDFTFAL---QDVLCAP-PAEAGDLALIFKLLPLLEREQAGSAMALLQSLNTPRMAVS 204 (253)
T ss_dssp -------HTT---CEEEEEE---CCTTTSC-CCCBCSEEEEESCHHHHHHHSTTHHHHHHHHCBCSEEEEE
T ss_pred -------hcC---CCceEEE---eecccCC-CCCCcchHHHHHHHHHhhhhchhhHHHHHHHhcCCCEEEE
Confidence 011 1111222 2554455 5559999999999999977665432222223444444443
|
| >2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0011 Score=66.32 Aligned_cols=128 Identities=13% Similarity=0.108 Sum_probs=68.9
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce-
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV- 129 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~- 129 (366)
..+|+|+|||+|..|..+ .+.. ....+|+.+|+.......+-+.+ .. .| ..++
T Consensus 260 g~~VLDlgaG~G~~t~~l--------a~~~-------~~~~~v~a~D~s~~~l~~~~~~~-------~~-~g---~~~v~ 313 (450)
T 2yxl_A 260 GETVVDLAAAPGGKTTHL--------AELM-------KNKGKIYAFDVDKMRMKRLKDFV-------KR-MG---IKIVK 313 (450)
T ss_dssp TCEEEESSCTTCHHHHHH--------HHHT-------TTCSEEEEECSCHHHHHHHHHHH-------HH-TT---CCSEE
T ss_pred cCEEEEeCCCccHHHHHH--------HHHc-------CCCCEEEEEcCCHHHHHHHHHHH-------HH-cC---CCcEE
Confidence 479999999999999853 2221 11268999998754333222211 11 11 1233
Q ss_pred EEeccCCCccccc--CCCCcccEEEc---ccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRL--FPNNSLHFIHS---SNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTL 204 (366)
Q Consensus 130 f~~~vpgSFy~~l--fp~~s~~~~~S---~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~ 204 (366)
++. +++..-. ++++++|.+++ ++.+.-+.+.|..... + ++..+ ....+.-..
T Consensus 314 ~~~---~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~-------~--------~~~~~-----~~l~~~q~~ 370 (450)
T 2yxl_A 314 PLV---KDARKAPEIIGEEVADKVLLDAPCTSSGTIGKNPELRWR-------L--------REDKI-----NEMSQLQRE 370 (450)
T ss_dssp EEC---SCTTCCSSSSCSSCEEEEEEECCCCCGGGTTTSTTHHHH-------C--------CTTSH-----HHHHHHHHH
T ss_pred EEE---cChhhcchhhccCCCCEEEEcCCCCCCeeeccChhhhhh-------C--------CHHHH-----HHHHHHHHH
Confidence 333 3442222 55688999996 2333333333432110 0 01111 111222256
Q ss_pred HHHHHHHHhccCceEEEEeecCC
Q 017747 205 FLRSRSEELVVGGRMVLILLGRI 227 (366)
Q Consensus 205 FL~~Ra~EL~~GG~lvl~~~g~~ 227 (366)
+|..-.+-|+|||+|+++.+...
T Consensus 371 iL~~a~~~LkpGG~lvy~tcs~~ 393 (450)
T 2yxl_A 371 LLESAARLVKPGGRLLYTTCSIF 393 (450)
T ss_dssp HHHHHHTTEEEEEEEEEEESCCC
T ss_pred HHHHHHHhcCCCcEEEEEeCCCC
Confidence 77888889999999999876543
|
| >1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A* | Back alignment and structure |
|---|
Probab=96.71 E-value=0.00081 Score=61.78 Aligned_cols=37 Identities=16% Similarity=0.246 Sum_probs=26.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTN 101 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~N 101 (366)
++.+|+|+|||+|..++.+ .+.. ++..+++..|....
T Consensus 79 ~~~~VLeiG~G~G~~~~~l--------a~~~-------~~~~~v~~iD~s~~ 115 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLAT--------ALAI-------PEDGKILAMDINKE 115 (247)
T ss_dssp TCCEEEEECCGGGHHHHHH--------HHHS-------CTTCEEEEEESCCH
T ss_pred CcCEEEEeCCCcCHHHHHH--------HHhC-------CCCCEEEEEECCHH
Confidence 4579999999999999853 2221 22478999998653
|
| >2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A* | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0072 Score=59.01 Aligned_cols=122 Identities=17% Similarity=0.273 Sum_probs=66.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
+..+|+|+|||+|..++.+.+.. .+..+++..|+-....... .++
T Consensus 39 ~~~~vLD~gcGtG~~~~~~~~~~---------------~~~~~i~gvDi~~~~~~~a--------------------~~~ 83 (421)
T 2ih2_A 39 RGGRVLEPACAHGPFLRAFREAH---------------GTAYRFVGVEIDPKALDLP--------------------PWA 83 (421)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHH---------------CSCSEEEEEESCTTTCCCC--------------------TTE
T ss_pred CCCEEEECCCCChHHHHHHHHHh---------------CCCCeEEEEECCHHHHHhC--------------------CCC
Confidence 35699999999999887532221 1237888888865321111 011
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHH------HHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQF------QEDFT 203 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~------~~D~~ 203 (366)
..+-+++.. ..+.+++|+++++=-........ ++ ....+++..+.|...+ ...+.
T Consensus 84 --~~~~~D~~~-~~~~~~fD~Ii~NPPy~~~~~~~--------------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (421)
T 2ih2_A 84 --EGILADFLL-WEPGEAFDLILGNPPYGIVGEAS--------------KY--PIHVFKAVKDLYKKAFSTWKGKYNLYG 144 (421)
T ss_dssp --EEEESCGGG-CCCSSCEEEEEECCCCCCBSCTT--------------TC--SBCCCHHHHHHHHHHCTTCCTTCCHHH
T ss_pred --cEEeCChhh-cCccCCCCEEEECcCccCccccc--------------cc--ccccCHHHHHHHHHhhhcccCCccHHH
Confidence 112245543 34567899999962111111100 00 0000122333332210 11345
Q ss_pred HHHHHHHHHhccCceEEEEeec
Q 017747 204 LFLRSRSEELVVGGRMVLILLG 225 (366)
Q Consensus 204 ~FL~~Ra~EL~~GG~lvl~~~g 225 (366)
.||..-.+-|+|||++++.+..
T Consensus 145 ~fl~~~~~~Lk~~G~~~~i~p~ 166 (421)
T 2ih2_A 145 AFLEKAVRLLKPGGVLVFVVPA 166 (421)
T ss_dssp HHHHHHHHHEEEEEEEEEEEEG
T ss_pred HHHHHHHHHhCCCCEEEEEECh
Confidence 8888889999999999999864
|
| >2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0037 Score=56.20 Aligned_cols=74 Identities=14% Similarity=0.133 Sum_probs=41.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++.+. +. ..+++..|+.......+-+.+ . ..+. ..++
T Consensus 91 ~~~~vldiG~G~G~~~~~l~--------~~----------~~~v~~vD~~~~~~~~a~~~~-------~-~~~~--~~~~ 142 (248)
T 2yvl_A 91 KEKRVLEFGTGSGALLAVLS--------EV----------AGEVWTFEAVEEFYKTAQKNL-------K-KFNL--GKNV 142 (248)
T ss_dssp TTCEEEEECCTTSHHHHHHH--------HH----------SSEEEEECSCHHHHHHHHHHH-------H-HTTC--CTTE
T ss_pred CCCEEEEeCCCccHHHHHHH--------Hh----------CCEEEEEecCHHHHHHHHHHH-------H-HcCC--CCcE
Confidence 35799999999999887532 21 167888888543222221111 0 1111 0122
Q ss_pred EEeccCCCcccccCCCCcccEEEc
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHS 153 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S 153 (366)
..+.+++.+.+++++++|++++
T Consensus 143 --~~~~~d~~~~~~~~~~~D~v~~ 164 (248)
T 2yvl_A 143 --KFFNVDFKDAEVPEGIFHAAFV 164 (248)
T ss_dssp --EEECSCTTTSCCCTTCBSEEEE
T ss_pred --EEEEcChhhcccCCCcccEEEE
Confidence 1123466553337789999997
|
| >1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A* | Back alignment and structure |
|---|
Probab=96.60 E-value=0.0025 Score=62.23 Aligned_cols=114 Identities=11% Similarity=0.059 Sum_probs=67.1
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc-
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS- 128 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~- 128 (366)
...+|+|+|||+|..|+.+. .. ..+|+..|+.......+-+ ... .++ ..+
T Consensus 209 ~~~~VLDlg~G~G~~~~~la--------~~----------~~~v~~vD~s~~~~~~a~~-------n~~-~n~---~~~~ 259 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLA--------LG----------FREVVAVDSSAEALRRAEE-------NAR-LNG---LGNV 259 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHH--------HH----------EEEEEEEESCHHHHHHHHH-------HHH-HTT---CTTE
T ss_pred CCCeEEEeeeccCHHHHHHH--------Hh----------CCEEEEEECCHHHHHHHHH-------HHH-HcC---CCCc
Confidence 45799999999999998532 21 1678888875422211111 111 112 122
Q ss_pred eEEeccCCCcccccC----CCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLF----PNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTL 204 (366)
Q Consensus 129 ~f~~~vpgSFy~~lf----p~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~ 204 (366)
.|+. ++..+-+. ..+++|++++ ++|..... +. .+ ....+++..
T Consensus 260 ~~~~---~d~~~~~~~~~~~~~~fD~Ii~--------dpP~~~~~-------~~----------~~-----~~~~~~~~~ 306 (382)
T 1wxx_A 260 RVLE---ANAFDLLRRLEKEGERFDLVVL--------DPPAFAKG-------KK----------DV-----ERAYRAYKE 306 (382)
T ss_dssp EEEE---SCHHHHHHHHHHTTCCEEEEEE--------CCCCSCCS-------TT----------SH-----HHHHHHHHH
T ss_pred eEEE---CCHHHHHHHHHhcCCCeeEEEE--------CCCCCCCC-------hh----------HH-----HHHHHHHHH
Confidence 2343 35433221 2678999985 33332111 10 11 344678889
Q ss_pred HHHHHHHHhccCceEEEEeec
Q 017747 205 FLRSRSEELVVGGRMVLILLG 225 (366)
Q Consensus 205 FL~~Ra~EL~~GG~lvl~~~g 225 (366)
+|..-.+-|+|||+|+++...
T Consensus 307 ~l~~~~~~LkpgG~l~~~~~~ 327 (382)
T 1wxx_A 307 VNLRAIKLLKEGGILATASCS 327 (382)
T ss_dssp HHHHHHHTEEEEEEEEEEECC
T ss_pred HHHHHHHhcCCCCEEEEEECC
Confidence 999999999999999998753
|
| >3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium} | Back alignment and structure |
|---|
Probab=96.55 E-value=0.00085 Score=67.58 Aligned_cols=127 Identities=11% Similarity=0.014 Sum_probs=69.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..|+.+...+ ...-+|+.+|+.......+-+.+. . .| ..++
T Consensus 105 ~g~~VLDlcaGpGgkt~~lA~~~---------------~~~g~V~AvDis~~rl~~~~~n~~-------r-~g---~~nv 158 (456)
T 3m4x_A 105 PGEKVLDLCAAPGGKSTQLAAQM---------------KGKGLLVTNEIFPKRAKILSENIE-------R-WG---VSNA 158 (456)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHH---------------TTCSEEEEECSSHHHHHHHHHHHH-------H-HT---CSSE
T ss_pred CCCEEEEECCCcCHHHHHHHHHc---------------CCCCEEEEEeCCHHHHHHHHHHHH-------H-cC---CCce
Confidence 35799999999999998643322 123689999996543333322211 1 12 1233
Q ss_pred -EEeccCCCccccc-CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHH----HHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRL-FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSK----AYFKQFQEDFT 203 (366)
Q Consensus 130 -f~~~vpgSFy~~l-fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~----ay~~Q~~~D~~ 203 (366)
++. ++...-. ..++++|.+++ +.|+.-.. .+.+ .+.+.. .......+.-.
T Consensus 159 ~v~~---~Da~~l~~~~~~~FD~Il~--------DaPCSg~G----~~rr---------~p~~~~~~~~~~~~~l~~~Q~ 214 (456)
T 3m4x_A 159 IVTN---HAPAELVPHFSGFFDRIVV--------DAPCSGEG----MFRK---------DPNAIKEWTEESPLYCQKRQQ 214 (456)
T ss_dssp EEEC---CCHHHHHHHHTTCEEEEEE--------ECCCCCGG----GTTT---------CHHHHHHCCTTHHHHHHHHHH
T ss_pred EEEe---CCHHHhhhhccccCCEEEE--------CCCCCCcc----cccc---------CHHHhhhcCHHHHHHHHHHHH
Confidence 333 2332111 23678999976 34442211 0000 011110 11223334445
Q ss_pred HHHHHHHHHhccCceEEEEeecC
Q 017747 204 LFLRSRSEELVVGGRMVLILLGR 226 (366)
Q Consensus 204 ~FL~~Ra~EL~~GG~lvl~~~g~ 226 (366)
.+|..-.+-|+|||+||.+++..
T Consensus 215 ~iL~~a~~~LkpGG~LvYsTCs~ 237 (456)
T 3m4x_A 215 EILSSAIKMLKNKGQLIYSTCTF 237 (456)
T ss_dssp HHHHHHHHTEEEEEEEEEEESCC
T ss_pred HHHHHHHHhcCCCcEEEEEEeec
Confidence 78888899999999999987644
|
| >4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=96.53 E-value=0.0049 Score=60.74 Aligned_cols=114 Identities=14% Similarity=0.051 Sum_probs=65.7
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceE
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVY 130 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 130 (366)
..+|+|+|||+|..|+.+. +. | ..|+..|+.......+-+.+ .. ++. ..-+
T Consensus 215 g~~VLDlg~GtG~~sl~~a--------~~-----g-----a~V~avDis~~al~~a~~n~-------~~-ng~---~~~~ 265 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAA--------RK-----G-----AYALAVDKDLEALGVLDQAA-------LR-LGL---RVDI 265 (393)
T ss_dssp TCEEEEESCTTTHHHHHHH--------HT-----T-----CEEEEEESCHHHHHHHHHHH-------HH-HTC---CCEE
T ss_pred CCeEEEcccchhHHHHHHH--------Hc-----C-----CeEEEEECCHHHHHHHHHHH-------HH-hCC---CCcE
Confidence 5799999999999998531 11 1 34999998754332222211 11 121 1223
Q ss_pred EeccCCCccccc-CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 131 IAGYPGSFYGRL-FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 131 ~~~vpgSFy~~l-fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
.. ++..+-+ ..++.+|++++. .|. +.. + +.. .....+|+..++..-
T Consensus 266 ~~---~D~~~~l~~~~~~fD~Ii~d--------pP~-f~~------~----------~~~-----~~~~~~~~~~ll~~a 312 (393)
T 4dmg_A 266 RH---GEALPTLRGLEGPFHHVLLD--------PPT-LVK------R----------PEE-----LPAMKRHLVDLVREA 312 (393)
T ss_dssp EE---SCHHHHHHTCCCCEEEEEEC--------CCC-CCS------S----------GGG-----HHHHHHHHHHHHHHH
T ss_pred EE---ccHHHHHHHhcCCCCEEEEC--------CCc-CCC------C----------HHH-----HHHHHHHHHHHHHHH
Confidence 33 3443322 113349999863 232 211 0 011 234567888899999
Q ss_pred HHHhccCceEEEEeecC
Q 017747 210 SEELVVGGRMVLILLGR 226 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~ 226 (366)
.+-|+|||+|++.....
T Consensus 313 ~~~LkpGG~Lv~~s~s~ 329 (393)
T 4dmg_A 313 LRLLAEEGFLWLSSCSY 329 (393)
T ss_dssp HHTEEEEEEEEEEECCT
T ss_pred HHhcCCCCEEEEEECCC
Confidence 99999999999665433
|
| >3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca} | Back alignment and structure |
|---|
Probab=96.48 E-value=0.00049 Score=60.90 Aligned_cols=36 Identities=8% Similarity=-0.080 Sum_probs=25.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPT 100 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~ 100 (366)
.+.+|+|+|||+|..|+.+ .+. -++..+|+..|+..
T Consensus 56 ~~~~vLdiG~G~G~~~~~l--------a~~-------~~~~~~v~~vD~~~ 91 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWF--------ARA-------ISISSRVVMIDPDR 91 (210)
T ss_dssp CCSEEEEESCGGGHHHHHH--------HTT-------SCTTCEEEEEESCH
T ss_pred CCCEEEEEcCCccHHHHHH--------HHh-------CCCCCEEEEEECCH
Confidence 3579999999999998752 221 12247899999854
|
| >3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=96.45 E-value=0.0049 Score=57.30 Aligned_cols=106 Identities=9% Similarity=-0.041 Sum_probs=60.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..|+.+ .+. .+..+|+..|+.......+-+. ... ++. .+..
T Consensus 119 ~~~~VLDlgcG~G~~s~~l--------a~~--------~~~~~V~~vD~s~~av~~a~~n-------~~~-n~l--~~~~ 172 (272)
T 3a27_A 119 ENEVVVDMFAGIGYFTIPL--------AKY--------SKPKLVYAIEKNPTAYHYLCEN-------IKL-NKL--NNVI 172 (272)
T ss_dssp TTCEEEETTCTTTTTHHHH--------HHH--------TCCSEEEEEECCHHHHHHHHHH-------HHH-TTC--SSEE
T ss_pred CCCEEEEecCcCCHHHHHH--------HHh--------CCCCEEEEEeCCHHHHHHHHHH-------HHH-cCC--CCEE
Confidence 4579999999999999853 222 1136899999854322222111 111 111 1123
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
|+.+ +..+- -..+++|++++.. |... ..+|..-
T Consensus 173 ~~~~---d~~~~-~~~~~~D~Vi~d~--------p~~~-----------------------------------~~~l~~~ 205 (272)
T 3a27_A 173 PILA---DNRDV-ELKDVADRVIMGY--------VHKT-----------------------------------HKFLDKT 205 (272)
T ss_dssp EEES---CGGGC-CCTTCEEEEEECC--------CSSG-----------------------------------GGGHHHH
T ss_pred EEEC---ChHHc-CccCCceEEEECC--------cccH-----------------------------------HHHHHHH
Confidence 5543 44332 1156899997652 2211 1123444
Q ss_pred HHHhccCceEEEEeecCCC
Q 017747 210 SEELVVGGRMVLILLGRIG 228 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~~ 228 (366)
.+.|+|||+++++.....+
T Consensus 206 ~~~LkpgG~l~~s~~~~~~ 224 (272)
T 3a27_A 206 FEFLKDRGVIHYHETVAEK 224 (272)
T ss_dssp HHHEEEEEEEEEEEEEEGG
T ss_pred HHHcCCCCEEEEEEcCccc
Confidence 6789999999999876644
|
| >3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP} | Back alignment and structure |
|---|
Probab=96.40 E-value=0.0022 Score=57.93 Aligned_cols=35 Identities=17% Similarity=0.297 Sum_probs=25.0
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCC
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPT 100 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~ 100 (366)
+.+|+|+|||+|..++.+ .+. -++..+++..|...
T Consensus 73 ~~~vLdiG~G~G~~~~~l--------a~~-------~~~~~~v~~iD~~~ 107 (232)
T 3cbg_A 73 AKQVLEIGVFRGYSALAM--------ALQ-------LPPDGQIIACDQDP 107 (232)
T ss_dssp CCEEEEECCTTSHHHHHH--------HTT-------SCTTCEEEEEESCH
T ss_pred CCEEEEecCCCCHHHHHH--------HHh-------CCCCCEEEEEECCH
Confidence 569999999999998753 221 12246889999854
|
| >3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum} | Back alignment and structure |
|---|
Probab=96.38 E-value=0.0015 Score=59.37 Aligned_cols=36 Identities=11% Similarity=0.104 Sum_probs=26.1
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPT 100 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~ 100 (366)
++.+|+|+|||+|..++.+...+ ++..+++..|+..
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~---------------~~~~~v~~iD~~~ 105 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSI---------------PDDGKITAIDFDR 105 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHS---------------CTTCEEEEEESCH
T ss_pred CCCEEEEeCCCCCHHHHHHHHhC---------------CCCCEEEEEECCH
Confidence 46799999999999997532211 2247889999854
|
| >2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45 | Back alignment and structure |
|---|
Probab=96.36 E-value=0.0056 Score=58.73 Aligned_cols=128 Identities=10% Similarity=0.092 Sum_probs=68.5
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|.|||+|..++.+.+.+. . ......+++..|+-..-...+-..+. ..| ...-
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~--------~---~~~~~~~v~GiDi~~~~~~~a~~n~~--------~~g---~~~~ 187 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLE--------L---KGDVDVHASGVDVDDLLISLALVGAD--------LQR---QKMT 187 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHH--------T---TSSCEEEEEEEESCHHHHHHHHHHHH--------HHT---CCCE
T ss_pred CCCEEEeCCCCccHHHHHHHHHHH--------H---hcCCCceEEEEECCHHHHHHHHHHHH--------hCC---CCce
Confidence 468999999999998876443321 0 00123789999985422221111110 011 1112
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHH-HHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDF-TLFLRS 208 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~-~~FL~~ 208 (366)
+.. +++... .+.+.+|+++++--+++.... . ....-.+...+|. .|. ..|+..
T Consensus 188 i~~---~D~l~~-~~~~~fD~Ii~NPPfg~~~~~-~-~~~~~~~~~~~g~--------------------~~~~~~~l~~ 241 (344)
T 2f8l_A 188 LLH---QDGLAN-LLVDPVDVVISDLPVGYYPDD-E-NAKTFELCREEGH--------------------SFAHFLFIEQ 241 (344)
T ss_dssp EEE---SCTTSC-CCCCCEEEEEEECCCSEESCH-H-HHTTSTTCCSSSC--------------------EEHHHHHHHH
T ss_pred EEE---CCCCCc-cccCCccEEEECCCCCCcCch-h-hhhhccccCCCCc--------------------chHHHHHHHH
Confidence 222 354443 356789999999777664321 0 0000000001111 012 246777
Q ss_pred HHHHhccCceEEEEeec
Q 017747 209 RSEELVVGGRMVLILLG 225 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g 225 (366)
-.+-|+|||++++.+..
T Consensus 242 ~~~~Lk~gG~~~~v~p~ 258 (344)
T 2f8l_A 242 GMRYTKPGGYLFFLVPD 258 (344)
T ss_dssp HHHTEEEEEEEEEEEEG
T ss_pred HHHHhCCCCEEEEEECc
Confidence 78899999999999854
|
| >3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=96.30 E-value=0.01 Score=59.95 Aligned_cols=76 Identities=17% Similarity=0.142 Sum_probs=42.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
+..+|+|+|||+|..++.+ .+ .+..+|+..|+.. ....+-+ .. ...+. ..++
T Consensus 158 ~~~~VLDiGcGtG~la~~l--------a~---------~~~~~V~gvD~s~-~l~~A~~-------~~-~~~gl--~~~v 209 (480)
T 3b3j_A 158 KDKIVLDVGCGSGILSFFA--------AQ---------AGARKIYAVEAST-MAQHAEV-------LV-KSNNL--TDRI 209 (480)
T ss_dssp TTCEEEEESCSTTHHHHHH--------HH---------TTCSEEEEEECHH-HHHHHHH-------HH-HHTTC--TTTE
T ss_pred CCCEEEEecCcccHHHHHH--------HH---------cCCCEEEEEEcHH-HHHHHHH-------HH-HHcCC--CCcE
Confidence 3579999999999987642 22 1236899999853 2211111 11 11121 1222
Q ss_pred -EEeccCCCcccccCCCCcccEEEccccc
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHSSNSL 157 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S~~al 157 (366)
++. +++.+--+ ++++|+++|...+
T Consensus 210 ~~~~---~d~~~~~~-~~~fD~Ivs~~~~ 234 (480)
T 3b3j_A 210 VVIP---GKVEEVSL-PEQVDIIISEPMG 234 (480)
T ss_dssp EEEE---SCTTTCCC-SSCEEEEECCCCH
T ss_pred EEEE---CchhhCcc-CCCeEEEEEeCch
Confidence 333 45544223 4689999997653
|
| >2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A | Back alignment and structure |
|---|
Probab=96.29 E-value=0.0088 Score=55.53 Aligned_cols=100 Identities=8% Similarity=0.019 Sum_probs=58.5
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+.+.+|+|+|||+|..+.. +. .. + .++...|+-.......-+.++.+...+. .++
T Consensus 71 ~~~~~VL~iG~G~G~~~~~--------ll--------~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~-------~~r 125 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQ--------LF--------KY-D-THIDFVQADEKILDSFISFFPHFHEVKN-------NKN 125 (262)
T ss_dssp SCCCEEEEESSCCHHHHHH--------HT--------TS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHT-------CTT
T ss_pred CCCCEEEEEeCCcCHHHHH--------HH--------hC-C-CEEEEEECCHHHHHHHHHHHHhhccccC-------CCe
Confidence 4568999999999987753 11 12 4 6888999865333333333332211111 122
Q ss_pred e-EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 129 ~-f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
+ ++.+ +..+-+ +++|++++.. + + + . .|++
T Consensus 126 v~~~~~---D~~~~~---~~fD~Ii~d~--------~----d-----------------p--~-------------~~~~ 155 (262)
T 2cmg_A 126 FTHAKQ---LLDLDI---KKYDLIFCLQ--------E----P-----------------D--I-------------HRID 155 (262)
T ss_dssp EEEESS---GGGSCC---CCEEEEEESS--------C----C-----------------C--H-------------HHHH
T ss_pred EEEEec---hHHHHH---hhCCEEEECC--------C----C-----------------h--H-------------HHHH
Confidence 2 3333 322212 7899998752 1 1 0 1 0677
Q ss_pred HHHHHhccCceEEEEe
Q 017747 208 SRSEELVVGGRMVLIL 223 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~ 223 (366)
...+-|+|||+|++..
T Consensus 156 ~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 156 GLKRMLKEDGVFISVA 171 (262)
T ss_dssp HHHTTEEEEEEEEEEE
T ss_pred HHHHhcCCCcEEEEEc
Confidence 8899999999999974
|
| >1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A* | Back alignment and structure |
|---|
Probab=95.83 E-value=0.0059 Score=57.25 Aligned_cols=34 Identities=18% Similarity=0.350 Sum_probs=25.3
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCC
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTN 101 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~N 101 (366)
..+|+|+|||+|..++.+ .+ . |..+|+..|+...
T Consensus 124 ~~~vLDlG~GsG~~~~~l--------a~--------~-~~~~v~~vDis~~ 157 (284)
T 1nv8_A 124 IKTVADIGTGSGAIGVSV--------AK--------F-SDAIVFATDVSSK 157 (284)
T ss_dssp CCEEEEESCTTSHHHHHH--------HH--------H-SSCEEEEEESCHH
T ss_pred CCEEEEEeCchhHHHHHH--------HH--------C-CCCEEEEEECCHH
Confidence 468999999999998752 22 1 3488999998643
|
| >1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24 | Back alignment and structure |
|---|
Probab=95.76 E-value=0.0024 Score=59.94 Aligned_cols=80 Identities=11% Similarity=0.077 Sum_probs=46.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..|..+ .++ + .+|+..|+.......+-+.+. ..+. .+++
T Consensus 28 ~~~~VLDiG~G~G~lt~~L--------~~~-----~-----~~v~~vD~~~~~~~~a~~~~~--------~~~~--~~~v 79 (285)
T 1zq9_A 28 PTDVVLEVGPGTGNMTVKL--------LEK-----A-----KKVVACELDPRLVAELHKRVQ--------GTPV--ASKL 79 (285)
T ss_dssp TTCEEEEECCTTSTTHHHH--------HHH-----S-----SEEEEEESCHHHHHHHHHHHT--------TSTT--GGGE
T ss_pred CCCEEEEEcCcccHHHHHH--------Hhh-----C-----CEEEEEECCHHHHHHHHHHHH--------hcCC--CCce
Confidence 4579999999999999753 222 1 478888875432222221111 0000 0122
Q ss_pred -EEeccCCCcccccCCCCcccEEEcccccccccC
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSK 162 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~ 162 (366)
++. +++.+--+| ++|.++++...||.+.
T Consensus 80 ~~~~---~D~~~~~~~--~fD~vv~nlpy~~~~~ 108 (285)
T 1zq9_A 80 QVLV---GDVLKTDLP--FFDTCVANLPYQISSP 108 (285)
T ss_dssp EEEE---SCTTTSCCC--CCSEEEEECCGGGHHH
T ss_pred EEEE---cceecccch--hhcEEEEecCcccchH
Confidence 333 455443233 7999999999888654
|
| >2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51 | Back alignment and structure |
|---|
Probab=95.71 E-value=0.0092 Score=58.38 Aligned_cols=118 Identities=10% Similarity=0.065 Sum_probs=67.5
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..|+.+ .+. ...+|+..|+.......+-+. ... ++.. .+-.
T Consensus 217 ~~~~VLDl~~G~G~~~~~l--------a~~---------g~~~v~~vD~s~~~l~~a~~n-------~~~-n~~~-~~v~ 270 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHA--------AIA---------GADEVIGIDKSPRAIETAKEN-------AKL-NGVE-DRMK 270 (396)
T ss_dssp TTCEEEETTCTTTHHHHHH--------HHT---------TCSEEEEEESCHHHHHHHHHH-------HHH-TTCG-GGEE
T ss_pred CCCeEEEecCCCCHHHHHH--------HHC---------CCCEEEEEeCCHHHHHHHHHH-------HHH-cCCC-ccce
Confidence 4579999999999998753 221 115789999854322222111 111 1110 0122
Q ss_pred EEeccCCCcccccC----CCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLF----PNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLF 205 (366)
Q Consensus 130 f~~~vpgSFy~~lf----p~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~F 205 (366)
|+. ++..+.+. +.+++|++++ +.|... . ++ ..+ ....+++..+
T Consensus 271 ~~~---~d~~~~~~~~~~~~~~fD~Vi~--------dpP~~~-~------~~----------~~~-----~~~~~~~~~~ 317 (396)
T 2as0_A 271 FIV---GSAFEEMEKLQKKGEKFDIVVL--------DPPAFV-Q------HE----------KDL-----KAGLRAYFNV 317 (396)
T ss_dssp EEE---SCHHHHHHHHHHTTCCEEEEEE--------CCCCSC-S------SG----------GGH-----HHHHHHHHHH
T ss_pred EEE---CCHHHHHHHHHhhCCCCCEEEE--------CCCCCC-C------CH----------HHH-----HHHHHHHHHH
Confidence 444 35433221 2678999986 223211 1 11 111 3345788899
Q ss_pred HHHHHHHhccCceEEEEeecC
Q 017747 206 LRSRSEELVVGGRMVLILLGR 226 (366)
Q Consensus 206 L~~Ra~EL~~GG~lvl~~~g~ 226 (366)
|..-.+-|+|||+|+++....
T Consensus 318 l~~~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 318 NFAGLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp HHHHHTTEEEEEEEEEEECCT
T ss_pred HHHHHHhcCCCcEEEEEECCC
Confidence 999999999999998887543
|
| >3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A* | Back alignment and structure |
|---|
Probab=95.71 E-value=0.0052 Score=58.27 Aligned_cols=79 Identities=11% Similarity=0.014 Sum_probs=50.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..|..+ .++ ..+|+..|+-......+-+.+. . .+++
T Consensus 50 ~~~~VLEIG~G~G~lT~~L--------a~~----------~~~V~aVEid~~li~~a~~~~~-------~------~~~v 98 (295)
T 3gru_A 50 KDDVVLEIGLGKGILTEEL--------AKN----------AKKVYVIEIDKSLEPYANKLKE-------L------YNNI 98 (295)
T ss_dssp TTCEEEEECCTTSHHHHHH--------HHH----------SSEEEEEESCGGGHHHHHHHHH-------H------CSSE
T ss_pred CcCEEEEECCCchHHHHHH--------Hhc----------CCEEEEEECCHHHHHHHHHHhc-------c------CCCe
Confidence 3579999999999999863 222 1578888886543333322211 0 1232
Q ss_pred -EEeccCCCcccccCCCCcccEEEcccccccccC
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSK 162 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~ 162 (366)
++. |++.+--+|+.++|.++++...||.+.
T Consensus 99 ~vi~---gD~l~~~~~~~~fD~Iv~NlPy~is~p 129 (295)
T 3gru_A 99 EIIW---GDALKVDLNKLDFNKVVANLPYQISSP 129 (295)
T ss_dssp EEEE---SCTTTSCGGGSCCSEEEEECCGGGHHH
T ss_pred EEEE---CchhhCCcccCCccEEEEeCcccccHH
Confidence 333 567655577778999999988877543
|
| >3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A* | Back alignment and structure |
|---|
Probab=95.60 E-value=0.0054 Score=59.74 Aligned_cols=102 Identities=12% Similarity=0.064 Sum_probs=56.8
Q ss_pred hHHHhhHHHHHHHHHHHHHHHHHHHHhhhhcCCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEec
Q 017747 17 SYARNSSLQKKASDTVKHITLEALQQLYLEIDPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLN 96 (366)
Q Consensus 17 sY~~nS~~Q~~~~~~~~~~l~~ai~~l~~~~~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~n 96 (366)
.|...+.++..+...+..+. .....+|+|+|||+|..++.+ ... .+..+++..
T Consensus 195 ~~~~~a~l~~~la~~l~~~~-----------~~~~~~vLD~gCGsG~~~i~~--------a~~--------~~~~~v~g~ 247 (373)
T 3tm4_A 195 VYDHPAHLKASIANAMIELA-----------ELDGGSVLDPMCGSGTILIEL--------ALR--------RYSGEIIGI 247 (373)
T ss_dssp CSCCTTCCCHHHHHHHHHHH-----------TCCSCCEEETTCTTCHHHHHH--------HHT--------TCCSCEEEE
T ss_pred cccCCCCccHHHHHHHHHhh-----------cCCCCEEEEccCcCcHHHHHH--------HHh--------CCCCeEEEE
Confidence 34555555555555444322 134578999999999988642 121 122478999
Q ss_pred CCCCCchhHHHhhCchhHHHHhhhcCCCCCCceEEeccCCCcccccCCCCcccEEEccccc
Q 017747 97 DLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSL 157 (366)
Q Consensus 97 DLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~~lfp~~s~~~~~S~~al 157 (366)
|+........-+.+. ..|.. ..-.|.. +++.+-.+|++++|+++++--+
T Consensus 248 Dis~~~l~~A~~n~~--------~~gl~-~~i~~~~---~D~~~~~~~~~~fD~Ii~npPy 296 (373)
T 3tm4_A 248 EKYRKHLIGAEMNAL--------AAGVL-DKIKFIQ---GDATQLSQYVDSVDFAISNLPY 296 (373)
T ss_dssp ESCHHHHHHHHHHHH--------HTTCG-GGCEEEE---CCGGGGGGTCSCEEEEEEECCC
T ss_pred eCCHHHHHHHHHHHH--------HcCCC-CceEEEE---CChhhCCcccCCcCEEEECCCC
Confidence 986543333322211 11110 0112333 4666655778999999996443
|
| >1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32 | Back alignment and structure |
|---|
Probab=95.59 E-value=0.022 Score=49.48 Aligned_cols=75 Identities=7% Similarity=0.012 Sum_probs=42.5
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++. +.+. +..+++..|+.......+-+.+. +--
T Consensus 51 ~~~~vlD~gcG~G~~~~~--------l~~~---------~~~~v~~vD~~~~~~~~a~~~~~---------------~~~ 98 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACG--------SYLL---------GAESVTAFDIDPDAIETAKRNCG---------------GVN 98 (200)
T ss_dssp BTSEEEEETCTTCHHHHH--------HHHT---------TBSEEEEEESCHHHHHHHHHHCT---------------TSE
T ss_pred CCCEEEEEeCCccHHHHH--------HHHc---------CCCEEEEEECCHHHHHHHHHhcC---------------CCE
Confidence 457999999999998864 2221 22468999985432221111111 112
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccC
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSK 162 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~ 162 (366)
|+. +++.+ +| +++|+++++..+||++.
T Consensus 99 ~~~---~d~~~--~~-~~~D~v~~~~p~~~~~~ 125 (200)
T 1ne2_A 99 FMV---ADVSE--IS-GKYDTWIMNPPFGSVVK 125 (200)
T ss_dssp EEE---CCGGG--CC-CCEEEEEECCCC-----
T ss_pred EEE---CcHHH--CC-CCeeEEEECCCchhccC
Confidence 333 35543 34 79999999999999754
|
| >2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A* | Back alignment and structure |
|---|
Probab=95.49 E-value=0.0095 Score=58.32 Aligned_cols=116 Identities=13% Similarity=0.113 Sum_probs=64.9
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCC-Cce
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSS-PSV 129 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~-~~~ 129 (366)
..+|+|+|||+|..|+.+. .. | .-+|+..|+.......+-+.+ .. ++.. . .--
T Consensus 213 ~~~VLDl~cGtG~~sl~la--------~~-----g----a~~V~~vD~s~~al~~A~~N~-------~~-n~~~-~~~v~ 266 (385)
T 2b78_A 213 GKTVLNLFSYTAAFSVAAA--------MG-----G----AMATTSVDLAKRSRALSLAHF-------EA-NHLD-MANHQ 266 (385)
T ss_dssp TCEEEEETCTTTHHHHHHH--------HT-----T----BSEEEEEESCTTHHHHHHHHH-------HH-TTCC-CTTEE
T ss_pred CCeEEEEeeccCHHHHHHH--------HC-----C----CCEEEEEECCHHHHHHHHHHH-------HH-cCCC-ccceE
Confidence 4689999999999997531 11 1 147999998764333322211 11 1211 1 123
Q ss_pred EEeccCCCccccc--C--CCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRL--F--PNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLF 205 (366)
Q Consensus 130 f~~~vpgSFy~~l--f--p~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~F 205 (366)
|+.+ +..+-+ + ...++|++++. |+.... +++. ..+..+++..+
T Consensus 267 ~~~~---D~~~~l~~~~~~~~~fD~Ii~D---------PP~~~~------~~~~---------------~~~~~~~~~~l 313 (385)
T 2b78_A 267 LVVM---DVFDYFKYARRHHLTYDIIIID---------PPSFAR------NKKE---------------VFSVSKDYHKL 313 (385)
T ss_dssp EEES---CHHHHHHHHHHTTCCEEEEEEC---------CCCC-----------C---------------CCCHHHHHHHH
T ss_pred EEEC---CHHHHHHHHHHhCCCccEEEEC---------CCCCCC------Chhh---------------HHHHHHHHHHH
Confidence 4443 443322 1 14589999863 222110 0010 11234677778
Q ss_pred HHHHHHHhccCceEEEEeec
Q 017747 206 LRSRSEELVVGGRMVLILLG 225 (366)
Q Consensus 206 L~~Ra~EL~~GG~lvl~~~g 225 (366)
+..-.+-|+|||.++++...
T Consensus 314 l~~~~~~L~pgG~l~~~~~~ 333 (385)
T 2b78_A 314 IRQGLEILSENGLIIASTNA 333 (385)
T ss_dssp HHHHHHTEEEEEEEEEEECC
T ss_pred HHHHHHhcCCCcEEEEEeCC
Confidence 88888999999999998743
|
| >3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str} | Back alignment and structure |
|---|
Probab=95.48 E-value=0.018 Score=53.17 Aligned_cols=106 Identities=13% Similarity=0.093 Sum_probs=62.1
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+...+|+|+|||+|..++. +.+. .|..+|+..|+-..-....-+.+. .+|. ...
T Consensus 20 ~~g~~VlDIGtGsG~l~i~--------la~~--------~~~~~V~avDi~~~al~~A~~N~~--------~~gl--~~~ 73 (244)
T 3gnl_A 20 TKNERIADIGSDHAYLPCF--------AVKN--------QTASFAIAGEVVDGPFQSAQKQVR--------SSGL--TEQ 73 (244)
T ss_dssp CSSEEEEEETCSTTHHHHH--------HHHT--------TSEEEEEEEESSHHHHHHHHHHHH--------HTTC--TTT
T ss_pred CCCCEEEEECCccHHHHHH--------HHHh--------CCCCEEEEEECCHHHHHHHHHHHH--------HcCC--Cce
Confidence 3458999999999999985 2221 244689999986543333222211 1121 112
Q ss_pred eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
+- ..-|+.++.+.|.+++|++++. .. . ..-...+|..
T Consensus 74 I~--v~~gD~l~~~~~~~~~D~Ivia-----------gm-G-----------------------------g~lI~~IL~~ 110 (244)
T 3gnl_A 74 ID--VRKGNGLAVIEKKDAIDTIVIA-----------GM-G-----------------------------GTLIRTILEE 110 (244)
T ss_dssp EE--EEECSGGGGCCGGGCCCEEEEE-----------EE-C-----------------------------HHHHHHHHHH
T ss_pred EE--EEecchhhccCccccccEEEEe-----------CC-c-----------------------------hHHHHHHHHH
Confidence 21 1224666666555568888752 11 0 1124456667
Q ss_pred HHHHhccCceEEEEe
Q 017747 209 RSEELVVGGRMVLIL 223 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~ 223 (366)
..+-|+++|+||++-
T Consensus 111 ~~~~L~~~~~lIlq~ 125 (244)
T 3gnl_A 111 GAAKLAGVTKLILQP 125 (244)
T ss_dssp TGGGGTTCCEEEEEE
T ss_pred HHHHhCCCCEEEEEc
Confidence 677889999999884
|
| >3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae} | Back alignment and structure |
|---|
Probab=95.43 E-value=0.016 Score=53.01 Aligned_cols=106 Identities=12% Similarity=0.089 Sum_probs=62.0
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
++..+|+|+|||||..++.+ .+. .|..+|+..|+...-....-+.+. .+|. ..+
T Consensus 20 ~~g~~VlDIGtGsG~l~i~l--------a~~--------~~~~~V~AvDi~~~al~~A~~N~~--------~~gl--~~~ 73 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFL--------LQM--------GYCDFAIAGEVVNGPYQSALKNVS--------EHGL--TSK 73 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHH--------HHT--------TCEEEEEEEESSHHHHHHHHHHHH--------HTTC--TTT
T ss_pred CCCCEEEEECCchHHHHHHH--------HHh--------CCCCEEEEEECCHHHHHHHHHHHH--------HcCC--CCc
Confidence 34589999999999999852 221 234689999996543333322221 1121 112
Q ss_pred eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
+- ..-|+.++-+.|.+.+|++++. +. . ..-...||..
T Consensus 74 I~--~~~gD~l~~~~~~~~~D~Ivia-----------Gm------------------G------------g~lI~~IL~~ 110 (230)
T 3lec_A 74 ID--VRLANGLSAFEEADNIDTITIC-----------GM------------------G------------GRLIADILNN 110 (230)
T ss_dssp EE--EEECSGGGGCCGGGCCCEEEEE-----------EE------------------C------------HHHHHHHHHH
T ss_pred EE--EEECchhhccccccccCEEEEe-----------CC------------------c------------hHHHHHHHHH
Confidence 21 1224666666655578877742 11 0 1123456666
Q ss_pred HHHHhccCceEEEEe
Q 017747 209 RSEELVVGGRMVLIL 223 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~ 223 (366)
..+-|+++|+||++-
T Consensus 111 ~~~~l~~~~~lIlqp 125 (230)
T 3lec_A 111 DIDKLQHVKTLVLQP 125 (230)
T ss_dssp TGGGGTTCCEEEEEE
T ss_pred HHHHhCcCCEEEEEC
Confidence 677799999999885
|
| >3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A* | Back alignment and structure |
|---|
Probab=95.42 E-value=0.023 Score=51.70 Aligned_cols=37 Identities=5% Similarity=0.011 Sum_probs=27.1
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCC
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTN 101 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~N 101 (366)
+...+|+|+|||||..++.+ .+ ..|..+|+..|....
T Consensus 14 ~~g~~VlDIGtGsG~l~i~l--------a~--------~~~~~~V~avDi~~~ 50 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIEL--------VE--------RGQIKSAIAGEVVEG 50 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHH--------HH--------TTSEEEEEEEESSHH
T ss_pred CCCCEEEEeCCCcHHHHHHH--------HH--------hCCCCEEEEEECCHH
Confidence 34579999999999999852 22 134478999998653
|
| >4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A* | Back alignment and structure |
|---|
Probab=94.92 E-value=0.017 Score=60.43 Aligned_cols=102 Identities=17% Similarity=0.132 Sum_probs=56.1
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHhhhhcCCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCC
Q 017747 20 RNSSLQKKASDTVKHITLEALQQLYLEIDPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLP 99 (366)
Q Consensus 20 ~nS~~Q~~~~~~~~~~l~~ai~~l~~~~~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp 99 (366)
+....|+++..++++++.+. ....+..+|+|+|||+|+.+...+... ++ + .. .++||.-+-.
T Consensus 333 Ky~~Ye~AI~~Al~d~~~~~------~~~~~~~vVldVGaGrGpLv~~al~A~----a~------~-~~-~vkVyAVEkn 394 (637)
T 4gqb_A 333 KYSQYQQAIYKCLLDRVPEE------EKDTNVQVLMVLGAGRGPLVNASLRAA----KQ------A-DR-RIKLYAVEKN 394 (637)
T ss_dssp HHHHHHHHHHHHHHHHSCGG------GTTTCEEEEEEESCTTSHHHHHHHHHH----HH------T-TC-EEEEEEEESC
T ss_pred hHHHHHHHHHHHHHHhhhhc------cccCCCcEEEEECCCCcHHHHHHHHHH----Hh------c-CC-CcEEEEEECC
Confidence 56667776666655544331 012346789999999999977544333 22 1 11 3788988764
Q ss_pred CCchhHHHhhCchhHHHHhhhcCCCCCCceEEeccCCCcccccCCCCcccEEEc
Q 017747 100 TNDFNSVFKALPDFHRQLRNERGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHS 153 (366)
Q Consensus 100 ~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~~lfp~~s~~~~~S 153 (366)
.|=. +.+. ..+.++.. ..| ..+.|+- +.+-+++.+|+++|
T Consensus 395 p~A~--~a~~-------~v~~N~~~--dkV--tVI~gd~-eev~LPEKVDIIVS 434 (637)
T 4gqb_A 395 PNAV--VTLE-------NWQFEEWG--SQV--TVVSSDM-REWVAPEKADIIVS 434 (637)
T ss_dssp HHHH--HHHH-------HHHHHTTG--GGE--EEEESCT-TTCCCSSCEEEEEC
T ss_pred HHHH--HHHH-------HHHhccCC--CeE--EEEeCcc-eeccCCcccCEEEE
Confidence 3211 1111 11222321 122 2333555 56666688999998
|
| >1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A | Back alignment and structure |
|---|
Probab=94.88 E-value=0.013 Score=53.46 Aligned_cols=58 Identities=16% Similarity=0.078 Sum_probs=34.5
Q ss_pred chHHHhhHHHHHHHHHHHHHHHHHHHHhhhhcCCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEe
Q 017747 16 TSYARNSSLQKKASDTVKHITLEALQQLYLEIDPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYL 95 (366)
Q Consensus 16 ~sY~~nS~~Q~~~~~~~~~~l~~ai~~l~~~~~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~ 95 (366)
.+|.+|-..+..++..+...+. .....+|+|+|||+|..|..+ .++ + .+|+.
T Consensus 6 k~~gQ~fl~d~~~~~~i~~~~~----------~~~~~~VLDiG~G~G~lt~~l--------~~~-----~-----~~v~~ 57 (244)
T 1qam_A 6 IKHSQNFITSKHNIDKIMTNIR----------LNEHDNIFEIGSGKGHFTLEL--------VQR-----C-----NFVTA 57 (244)
T ss_dssp ----CCBCCCHHHHHHHHTTCC----------CCTTCEEEEECCTTSHHHHHH--------HHH-----S-----SEEEE
T ss_pred ccCCccccCCHHHHHHHHHhCC----------CCCCCEEEEEeCCchHHHHHH--------HHc-----C-----CeEEE
Confidence 4677776666666654432211 124578999999999999753 222 1 57888
Q ss_pred cCCCCC
Q 017747 96 NDLPTN 101 (366)
Q Consensus 96 nDLp~N 101 (366)
.|+...
T Consensus 58 vD~~~~ 63 (244)
T 1qam_A 58 IEIDHK 63 (244)
T ss_dssp ECSCHH
T ss_pred EECCHH
Confidence 888643
|
| >2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=94.76 E-value=0.008 Score=56.75 Aligned_cols=108 Identities=11% Similarity=0.036 Sum_probs=53.0
Q ss_pred CCCcchHHHhhHHHHHHHHHHHHHHHHHHHHhhhhcCCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcc
Q 017747 12 GTGPTSYARNSSLQKKASDTVKHITLEALQQLYLEIDPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEF 91 (366)
Q Consensus 12 g~g~~sY~~nS~~Q~~~~~~~~~~l~~ai~~l~~~~~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~ 91 (366)
+....+|.+|-..+..++..+...+. .....+|+|+|||+|..|..+ .+ . ..
T Consensus 14 ~~~~k~~Gq~fl~~~~i~~~i~~~~~----------~~~~~~VLDiG~G~G~lt~~L--------a~---------~-~~ 65 (299)
T 2h1r_A 14 RENLYFQGQHLLKNPGILDKIIYAAK----------IKSSDIVLEIGCGTGNLTVKL--------LP---------L-AK 65 (299)
T ss_dssp ---------CEECCHHHHHHHHHHHC----------CCTTCEEEEECCTTSTTHHHH--------TT---------T-SS
T ss_pred ccchhccccceecCHHHHHHHHHhcC----------CCCcCEEEEEcCcCcHHHHHH--------Hh---------c-CC
Confidence 33444666665555555544332221 134579999999999999752 11 1 25
Q ss_pred eEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceEEeccCCCcccccCCCCcccEEEcccccccccC
Q 017747 92 HFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSK 162 (366)
Q Consensus 92 ~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~ 162 (366)
+|+..|+.......+-+.+ .. .+ .+++ ..+-+++.+- |..++|+++++...||.+.
T Consensus 66 ~v~~vDi~~~~~~~a~~~~-------~~-~~---~~~v--~~~~~D~~~~--~~~~~D~Vv~n~py~~~~~ 121 (299)
T 2h1r_A 66 KVITIDIDSRMISEVKKRC-------LY-EG---YNNL--EVYEGDAIKT--VFPKFDVCTANIPYKISSP 121 (299)
T ss_dssp EEEEECSCHHHHHHHHHHH-------HH-TT---CCCE--EC----CCSS--CCCCCSEEEEECCGGGHHH
T ss_pred EEEEEECCHHHHHHHHHHH-------HH-cC---CCce--EEEECchhhC--CcccCCEEEEcCCcccccH
Confidence 7899998543222221111 10 11 1222 1233466432 3348999999988888653
|
| >3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A* | Back alignment and structure |
|---|
Probab=94.65 E-value=0.062 Score=50.38 Aligned_cols=20 Identities=20% Similarity=0.318 Sum_probs=16.9
Q ss_pred HHHHHHHhccC-ceEEEEeec
Q 017747 206 LRSRSEELVVG-GRMVLILLG 225 (366)
Q Consensus 206 L~~Ra~EL~~G-G~lvl~~~g 225 (366)
|..-.+-|+|| |.||+-.+.
T Consensus 166 L~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 166 LDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp HHHHHHHHTTCCSEEEEEESC
T ss_pred HHHHHHHhCCCCCeEEEEecC
Confidence 66667889999 999998876
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=94.47 E-value=0.021 Score=58.72 Aligned_cols=82 Identities=15% Similarity=0.268 Sum_probs=51.3
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+.+.+|+|+|||.|..|.. +.++ | .+|+.-|+........-.. ..+.|. ..-
T Consensus 65 ~~~~~vLDvGCG~G~~~~~--------la~~-----g-----a~V~giD~~~~~i~~a~~~--------a~~~~~--~~~ 116 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLS--------LASK-----G-----ATIVGIDFQQENINVCRAL--------AEENPD--FAA 116 (569)
T ss_dssp TSCCEEEEETCTTSHHHHH--------HHHT-----T-----CEEEEEESCHHHHHHHHHH--------HHTSTT--SEE
T ss_pred CCCCeEEEECCCCcHHHHH--------HHhC-----C-----CEEEEECCCHHHHHHHHHH--------HHhcCC--Cce
Confidence 4679999999999998864 4332 2 7899999875422211110 011111 112
Q ss_pred eEEeccCCCccccc---CCCCcccEEEcccccccccC
Q 017747 129 VYIAGYPGSFYGRL---FPNNSLHFIHSSNSLHWLSK 162 (366)
Q Consensus 129 ~f~~~vpgSFy~~l---fp~~s~~~~~S~~alhWls~ 162 (366)
-|..+ +. +.| ++++++|+|++.-.+|++.+
T Consensus 117 ~~~~~---~~-~~~~~~~~~~~fD~v~~~e~~ehv~~ 149 (569)
T 4azs_A 117 EFRVG---RI-EEVIAALEEGEFDLAIGLSVFHHIVH 149 (569)
T ss_dssp EEEEC---CH-HHHHHHCCTTSCSEEEEESCHHHHHH
T ss_pred EEEEC---CH-HHHhhhccCCCccEEEECcchhcCCC
Confidence 25554 33 333 57889999999999999765
|
| >2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45 | Back alignment and structure |
|---|
Probab=94.36 E-value=0.054 Score=53.85 Aligned_cols=21 Identities=33% Similarity=0.439 Sum_probs=18.5
Q ss_pred HHHHHHHHHhccCceEEEEee
Q 017747 204 LFLRSRSEELVVGGRMVLILL 224 (366)
Q Consensus 204 ~FL~~Ra~EL~~GG~lvl~~~ 224 (366)
.||+.-.+-|+|||++++.++
T Consensus 288 ~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 288 NFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp HHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHhccCCEEEEEEC
Confidence 678888899999999999985
|
| >2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638} | Back alignment and structure |
|---|
Probab=94.28 E-value=0.14 Score=49.58 Aligned_cols=106 Identities=11% Similarity=0.017 Sum_probs=61.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+| |+|..++.+ ... .|..+|+..|+........-+.+. ..|. .++
T Consensus 172 ~~~~VLDlG-G~G~~~~~l--------a~~--------~~~~~v~~vDi~~~~l~~a~~~~~--------~~g~---~~v 223 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIAL--------MLS--------GLPKRIAVLDIDERLTKFIEKAAN--------EIGY---EDI 223 (373)
T ss_dssp TTCEEEEES-CTTCHHHHH--------HHH--------TCCSEEEEECSCHHHHHHHHHHHH--------HHTC---CCE
T ss_pred CCCEEEEEC-CCCHHHHHH--------HHh--------CCCCEEEEEECCHHHHHHHHHHHH--------HcCC---CCE
Confidence 357999999 999998752 221 233689999986432222221111 1121 122
Q ss_pred EEeccCCCcccccC--CCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLF--PNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 130 f~~~vpgSFy~~lf--p~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
..+.+++.+.+- +++++|+++++.-+|+. +...||+
T Consensus 224 --~~~~~D~~~~l~~~~~~~fD~Vi~~~p~~~~----------------------------------------~~~~~l~ 261 (373)
T 2qm3_A 224 --EIFTFDLRKPLPDYALHKFDTFITDPPETLE----------------------------------------AIRAFVG 261 (373)
T ss_dssp --EEECCCTTSCCCTTTSSCBSEEEECCCSSHH----------------------------------------HHHHHHH
T ss_pred --EEEEChhhhhchhhccCCccEEEECCCCchH----------------------------------------HHHHHHH
Confidence 223356654331 34689999986433221 1266788
Q ss_pred HHHHHhccCceE-EEEeec
Q 017747 208 SRSEELVVGGRM-VLILLG 225 (366)
Q Consensus 208 ~Ra~EL~~GG~l-vl~~~g 225 (366)
.-.+-|+|||++ ++++..
T Consensus 262 ~~~~~LkpgG~~~~~~~~~ 280 (373)
T 2qm3_A 262 RGIATLKGPRCAGYFGITR 280 (373)
T ss_dssp HHHHTBCSTTCEEEEEECT
T ss_pred HHHHHcccCCeEEEEEEec
Confidence 888999999965 666543
|
| >3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A* | Back alignment and structure |
|---|
Probab=94.23 E-value=0.031 Score=59.16 Aligned_cols=119 Identities=17% Similarity=0.146 Sum_probs=66.6
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc-e
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS-V 129 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~-~ 129 (366)
..+|+|+|||+|..|+.+. .. | . -+|+..|+.......+-+. ... ++.. ..+ .
T Consensus 540 g~~VLDlg~GtG~~sl~aa--------~~-----g---a-~~V~aVD~s~~al~~a~~N-------~~~-ngl~-~~~v~ 593 (703)
T 3v97_A 540 GKDFLNLFSYTGSATVHAG--------LG-----G---A-RSTTTVDMSRTYLEWAERN-------LRL-NGLT-GRAHR 593 (703)
T ss_dssp TCEEEEESCTTCHHHHHHH--------HT-----T---C-SEEEEEESCHHHHHHHHHH-------HHH-TTCC-STTEE
T ss_pred CCcEEEeeechhHHHHHHH--------HC-----C---C-CEEEEEeCCHHHHHHHHHH-------HHH-cCCC-ccceE
Confidence 4689999999999987521 11 1 1 4699999865322222111 111 1211 112 2
Q ss_pred EEeccCCCccccc-CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRL-FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 130 f~~~vpgSFy~~l-fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
|+. ++.++-+ ...+++|++++. .|. +.. ++.. .+ ..+..+|...++..
T Consensus 594 ~i~---~D~~~~l~~~~~~fD~Ii~D--------PP~-f~~------~~~~-----------~~--~~~~~~~~~~ll~~ 642 (703)
T 3v97_A 594 LIQ---ADCLAWLREANEQFDLIFID--------PPT-FSN------SKRM-----------ED--AFDVQRDHLALMKD 642 (703)
T ss_dssp EEE---SCHHHHHHHCCCCEEEEEEC--------CCS-BC--------------------------CCBHHHHHHHHHHH
T ss_pred EEe---cCHHHHHHhcCCCccEEEEC--------Ccc-ccC------Cccc-----------hh--HHHHHHHHHHHHHH
Confidence 444 3444433 245789999863 332 211 0000 00 01235678888999
Q ss_pred HHHHhccCceEEEEeecC
Q 017747 209 RSEELVVGGRMVLILLGR 226 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~ 226 (366)
-.+-|+|||+|+++...+
T Consensus 643 a~~~LkpgG~L~~s~~~~ 660 (703)
T 3v97_A 643 LKRLLRAGGTIMFSNNKR 660 (703)
T ss_dssp HHHHEEEEEEEEEEECCT
T ss_pred HHHhcCCCcEEEEEECCc
Confidence 999999999999887553
|
| >1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32 | Back alignment and structure |
|---|
Probab=94.22 E-value=0.055 Score=47.07 Aligned_cols=79 Identities=11% Similarity=0.137 Sum_probs=46.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++.+ .+. .+ -+++..|+.......+-+.+.. .+ ..--
T Consensus 49 ~~~~vlD~g~G~G~~~~~l--------~~~--------~~-~~v~~vD~~~~~~~~a~~~~~~--------~~---~~~~ 100 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGA--------LLL--------GA-KEVICVEVDKEAVDVLIENLGE--------FK---GKFK 100 (207)
T ss_dssp TTCEEEEETCTTCHHHHHH--------HHT--------TC-SEEEEEESCHHHHHHHHHHTGG--------GT---TSEE
T ss_pred CcCEEEEeeCCCCHHHHHH--------HHc--------CC-CEEEEEECCHHHHHHHHHHHHH--------cC---CCEE
Confidence 4579999999999988742 221 11 4789999865333222222211 01 1112
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccC
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSK 162 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~ 162 (366)
++. +++.+ +| +++|+++++-.+|+.+.
T Consensus 101 ~~~---~d~~~--~~-~~~D~v~~~~p~~~~~~ 127 (207)
T 1wy7_A 101 VFI---GDVSE--FN-SRVDIVIMNPPFGSQRK 127 (207)
T ss_dssp EEE---SCGGG--CC-CCCSEEEECCCCSSSST
T ss_pred EEE---CchHH--cC-CCCCEEEEcCCCccccC
Confidence 333 45543 23 58999999888887653
|
| >2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A* | Back alignment and structure |
|---|
Probab=94.02 E-value=0.039 Score=52.84 Aligned_cols=32 Identities=22% Similarity=0.268 Sum_probs=23.9
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPT 100 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~ 100 (366)
...+|+|+|||+|..++. .+ ...+|+..|+..
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~------------------~~~~V~~vD~s~ 226 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CK------------------NAKKIYAIDINP 226 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TT------------------TSSEEEEEESCH
T ss_pred CCCEEEEccCccCHHHHh-cc------------------CCCEEEEEECCH
Confidence 357999999999998862 11 127899999854
|
| >3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus} | Back alignment and structure |
|---|
Probab=94.01 E-value=0.72 Score=49.49 Aligned_cols=24 Identities=25% Similarity=0.209 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHhccCceEEEEeec
Q 017747 202 FTLFLRSRSEELVVGGRMVLILLG 225 (366)
Q Consensus 202 ~~~FL~~Ra~EL~~GG~lvl~~~g 225 (366)
...|+..-.+-|++||++++.++.
T Consensus 444 y~aFIe~Al~lLKpGGrLAfIlP~ 467 (878)
T 3s1s_A 444 EALFLELVTELVQDGTVISAIMPK 467 (878)
T ss_dssp HHHHHHHHHHHSCTTCEEEEEEET
T ss_pred HHHHHHHHHHhcCCCcEEEEEECh
Confidence 567899999999999999999853
|
| >3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0 | Back alignment and structure |
|---|
Probab=93.69 E-value=0.043 Score=50.69 Aligned_cols=19 Identities=26% Similarity=0.309 Sum_probs=16.3
Q ss_pred CceEEEeecCCCCcchHHH
Q 017747 50 KTINIADLGCSSGPNTLAI 68 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~ 68 (366)
...+|+|+|||+|..|..+
T Consensus 29 ~~~~VLEIG~G~G~lt~~L 47 (255)
T 3tqs_A 29 KTDTLVEIGPGRGALTDYL 47 (255)
T ss_dssp TTCEEEEECCTTTTTHHHH
T ss_pred CcCEEEEEcccccHHHHHH
Confidence 3578999999999999864
|
| >2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=93.68 E-value=0.26 Score=45.48 Aligned_cols=24 Identities=25% Similarity=0.408 Sum_probs=19.8
Q ss_pred CCceEEEeecCCCCcchHHHHHHH
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDF 72 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~i 72 (366)
.++.+|+|+|||+|.|++.++...
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~ 82 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAF 82 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHH
T ss_pred CCCCEEEEECCChHHHHHHHHHHH
Confidence 357999999999999998765544
|
| >3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A* | Back alignment and structure |
|---|
Probab=93.56 E-value=0.026 Score=52.80 Aligned_cols=63 Identities=8% Similarity=-0.049 Sum_probs=37.8
Q ss_pred CCcchHHHhhHHHHHHHHHHHHHHHHHHHHhhhhcCCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcce
Q 017747 13 TGPTSYARNSSLQKKASDTVKHITLEALQQLYLEIDPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFH 92 (366)
Q Consensus 13 ~g~~sY~~nS~~Q~~~~~~~~~~l~~ai~~l~~~~~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~ 92 (366)
....+|.+|-..+..++.++...+. .... +|+|+|||+|..|..+ .++ + .+
T Consensus 20 ~~~k~~GQnfL~d~~i~~~Iv~~~~----------~~~~-~VLEIG~G~G~lt~~L--------~~~-----~-----~~ 70 (271)
T 3fut_A 20 FADKRFGQNFLVSEAHLRRIVEAAR----------PFTG-PVFEVGPGLGALTRAL--------LEA-----G-----AE 70 (271)
T ss_dssp CCSTTSSCCEECCHHHHHHHHHHHC----------CCCS-CEEEECCTTSHHHHHH--------HHT-----T-----CC
T ss_pred CccccCCccccCCHHHHHHHHHhcC----------CCCC-eEEEEeCchHHHHHHH--------HHc-----C-----CE
Confidence 3344666665555555554332221 1234 9999999999999753 221 1 57
Q ss_pred EEecCCCCCchh
Q 017747 93 FYLNDLPTNDFN 104 (366)
Q Consensus 93 v~~nDLp~NDFn 104 (366)
|+..|+-.....
T Consensus 71 V~avEid~~~~~ 82 (271)
T 3fut_A 71 VTAIEKDLRLRP 82 (271)
T ss_dssp EEEEESCGGGHH
T ss_pred EEEEECCHHHHH
Confidence 888888664333
|
| >3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei} | Back alignment and structure |
|---|
Probab=93.43 E-value=0.34 Score=49.64 Aligned_cols=145 Identities=13% Similarity=0.187 Sum_probs=69.4
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+.+.+|+|.+||||...+.+...+.+.-.+..... .......+++..|+-..-..-.-..+ .. .|. ..+
T Consensus 243 p~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~-~~~~~~~~i~G~Eid~~~~~lA~~Nl--~l------~gi--~~~ 311 (544)
T 3khk_A 243 PYKGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNA-SEQKKQISVYGQESNPTTWKLAAMNM--VI------RGI--DFN 311 (544)
T ss_dssp CCSEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCH-HHHGGGEEEEECCCCHHHHHHHHHHH--HH------TTC--CCB
T ss_pred cCCCeEeCcccCcCcHHHHHHHHHHHhccccccch-HHHhhhceEEEEeCCHHHHHHHHHHH--HH------hCC--Ccc
Confidence 44569999999999887665555433221110000 00001378899988432221111111 00 111 111
Q ss_pred eEEeccCCCcc-cccCCCCcccEEEcc--ccc-ccccCCCCcccccccCCCccc-----cEEEcCCCCHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFY-GRLFPNNSLHFIHSS--NSL-HWLSKVPPTLYNEMGESINKG-----NIYISESSPSAVSKAYFKQFQ 199 (366)
Q Consensus 129 ~f~~~vpgSFy-~~lfp~~s~~~~~S~--~al-hWls~~p~~~~~~~~~~~nkg-----~i~~~~~s~~~v~~ay~~Q~~ 199 (366)
+....|+++ ...++...+|+++++ +.. .|-.. .+... +-+.-| ...+..++.
T Consensus 312 --i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~---~~~~d--~r~~~g~~~~~~~~~~~~~~------------ 372 (544)
T 3khk_A 312 --FGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHE---KLADD--PRWTINTNGEKRILTPPTGN------------ 372 (544)
T ss_dssp --CCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCG---GGTTC--GGGEECCC--CEECCCCTTC------------
T ss_pred --cceeccchhcCcccccccccEEEECCCcCCccccch---hhhhh--hhhhcCcccccccccCCCcc------------
Confidence 111334443 444677899999996 222 24321 11000 000000 000001111
Q ss_pred HHHHHHHHHHHHHhccCceEEEEee
Q 017747 200 EDFTLFLRSRSEELVVGGRMVLILL 224 (366)
Q Consensus 200 ~D~~~FL~~Ra~EL~~GG~lvl~~~ 224 (366)
.|+ .|+..-.+-|+|||++++.++
T Consensus 373 ~~~-~Fl~~~l~~Lk~gGr~aiVlP 396 (544)
T 3khk_A 373 ANF-AWMLHMLYHLAPTGSMALLLA 396 (544)
T ss_dssp THH-HHHHHHHHTEEEEEEEEEEEE
T ss_pred hhH-HHHHHHHHHhccCceEEEEec
Confidence 122 588888999999999999985
|
| >3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12} | Back alignment and structure |
|---|
Probab=93.40 E-value=0.034 Score=54.34 Aligned_cols=25 Identities=12% Similarity=0.053 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHhccCceEEEEee
Q 017747 200 EDFTLFLRSRSEELVVGGRMVLILL 224 (366)
Q Consensus 200 ~D~~~FL~~Ra~EL~~GG~lvl~~~ 224 (366)
+++..++..-.+-|+|||.++++..
T Consensus 316 ~~~~~~l~~~~~~LkpgG~l~~~~~ 340 (396)
T 3c0k_A 316 RGYKDINMLAIQLLNEGGILLTFSC 340 (396)
T ss_dssp THHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 4566777888899999999999864
|
| >2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A* | Back alignment and structure |
|---|
Probab=93.12 E-value=0.11 Score=51.47 Aligned_cols=34 Identities=15% Similarity=0.049 Sum_probs=24.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTN 101 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~N 101 (366)
...+|+|+|||+|..++.+ .+. ..+|+..|+...
T Consensus 290 ~~~~VLDlgcG~G~~sl~l--------a~~----------~~~V~gvD~s~~ 323 (425)
T 2jjq_A 290 EGEKILDMYSGVGTFGIYL--------AKR----------GFNVKGFDSNEF 323 (425)
T ss_dssp CSSEEEEETCTTTHHHHHH--------HHT----------TCEEEEEESCHH
T ss_pred CCCEEEEeeccchHHHHHH--------HHc----------CCEEEEEECCHH
Confidence 3579999999999999753 221 157889998643
|
| >3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus} | Back alignment and structure |
|---|
Probab=92.65 E-value=0.34 Score=49.62 Aligned_cols=133 Identities=15% Similarity=0.159 Sum_probs=68.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|.+||||...+.+...+ . .....+++..|+-..-..-.-..+ .. .|.. ..+.
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l------------~-~~~~~~i~G~Eid~~~~~lA~~Nl--~l------~gi~-~~~~ 278 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYS------------R-QPQTVVYFGQELNTSTYNLARMNM--IL------HGVP-IENQ 278 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHC------------S-CTTTCEEEEEESCHHHHHHHHHHH--HH------TTCC-GGGE
T ss_pred CCCEEeecccchhHHHHHHHHHH------------H-hccCceEEEEECcHHHHHHHHHHH--HH------cCCC-cCcc
Confidence 35799999999999876543322 1 122488999998543222221111 00 1110 0111
Q ss_pred EEeccCCCcccc---cCCCCcccEEEcc--cccccccCCCCcccccccCCCc-cccEEEcCCCCHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGR---LFPNNSLHFIHSS--NSLHWLSKVPPTLYNEMGESIN-KGNIYISESSPSAVSKAYFKQFQEDFT 203 (366)
Q Consensus 130 f~~~vpgSFy~~---lfp~~s~~~~~S~--~alhWls~~p~~~~~~~~~~~n-kg~i~~~~~s~~~v~~ay~~Q~~~D~~ 203 (366)
....|+++.. .++...+|+++++ +...|-.. .....+ +-|. -|.+ ...+ ..|+
T Consensus 279 --~I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~-~~~~~d---~rf~~~G~~--~~~s------------~~~~- 337 (542)
T 3lkd_A 279 --FLHNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSAS-SGFMDD---PRFSPFGKL--APKS------------KADF- 337 (542)
T ss_dssp --EEEESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCC-GGGGGS---TTTGGGSSC--CCTT------------CCHH-
T ss_pred --ceEecceecccccccccccccEEEecCCcCCccccc-hhhhhh---hhhhhhhhc--CCCc------------hhhH-
Confidence 1122455443 2567889999997 44455211 000001 0010 0100 0011 1133
Q ss_pred HHHHHHHHHhc-cCceEEEEeec
Q 017747 204 LFLRSRSEELV-VGGRMVLILLG 225 (366)
Q Consensus 204 ~FL~~Ra~EL~-~GG~lvl~~~g 225 (366)
.|+..-.+-|+ |||++++.++.
T Consensus 338 ~Fl~~~l~~Lk~~gGr~a~VlP~ 360 (542)
T 3lkd_A 338 AFLLHGYYHLKQDNGVMAIVLPH 360 (542)
T ss_dssp HHHHHHHHTBCTTTCEEEEEEET
T ss_pred HHHHHHHHHhCCCceeEEEEecc
Confidence 48888889999 99999999853
|
| >3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A* | Back alignment and structure |
|---|
Probab=92.47 E-value=0.2 Score=46.87 Aligned_cols=35 Identities=11% Similarity=0.029 Sum_probs=25.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTN 101 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~N 101 (366)
...+|+|+|||+|+.|+.+ .++ | ..+|+.+|+-..
T Consensus 125 ~g~~VlD~~aG~G~~~i~~--------a~~-----g----~~~V~avD~np~ 159 (278)
T 3k6r_A 125 PDELVVDMFAGIGHLSLPI--------AVY-----G----KAKVIAIEKDPY 159 (278)
T ss_dssp TTCEEEETTCTTTTTTHHH--------HHH-----T----CCEEEEECCCHH
T ss_pred CCCEEEEecCcCcHHHHHH--------HHh-----c----CCeEEEEECCHH
Confidence 3579999999999999853 121 2 157999998654
|
| >1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24 | Back alignment and structure |
|---|
Probab=92.30 E-value=0.039 Score=50.06 Aligned_cols=34 Identities=15% Similarity=0.175 Sum_probs=25.1
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTN 101 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~N 101 (366)
...+|+|+|||+|..|..+ .++ + .+|+..|+...
T Consensus 29 ~~~~VLDiG~G~G~~~~~l--------~~~-----~-----~~v~~id~~~~ 62 (245)
T 1yub_A 29 ETDTVYEIGTGKGHLTTKL--------AKI-----S-----KQVTSIELDSH 62 (245)
T ss_dssp SSEEEEECSCCCSSCSHHH--------HHH-----S-----SEEEESSSSCS
T ss_pred CCCEEEEEeCCCCHHHHHH--------HHh-----C-----CeEEEEECCHH
Confidence 4579999999999999853 222 1 56888887654
|
| >3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus} | Back alignment and structure |
|---|
Probab=91.00 E-value=0.57 Score=43.91 Aligned_cols=20 Identities=20% Similarity=0.234 Sum_probs=16.8
Q ss_pred HHHHHHHhccC--ceEEEEeec
Q 017747 206 LRSRSEELVVG--GRMVLILLG 225 (366)
Q Consensus 206 L~~Ra~EL~~G--G~lvl~~~g 225 (366)
|..-.+-|+|| |.||+-++.
T Consensus 182 L~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 182 LNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp HHHHHHHHHHHCCCEEEEEESC
T ss_pred HHHHHHHcCCCCCCcEEEEEec
Confidence 66667889999 999998875
|
| >1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A* | Back alignment and structure |
|---|
Probab=90.84 E-value=0.11 Score=51.55 Aligned_cols=33 Identities=18% Similarity=0.099 Sum_probs=24.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPT 100 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~ 100 (366)
...+|+|+|||+|..++.+ .+ . ..+|+..|...
T Consensus 286 ~~~~VLDlgcG~G~~~~~l--------a~---------~-~~~V~gvD~s~ 318 (433)
T 1uwv_A 286 PEDRVLDLFCGMGNFTLPL--------AT---------Q-AASVVGVEGVP 318 (433)
T ss_dssp TTCEEEEESCTTTTTHHHH--------HT---------T-SSEEEEEESCH
T ss_pred CCCEEEECCCCCCHHHHHH--------Hh---------h-CCEEEEEeCCH
Confidence 3478999999999999753 11 1 26789999864
|
| >2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38 | Back alignment and structure |
|---|
Probab=90.59 E-value=0.68 Score=43.75 Aligned_cols=39 Identities=13% Similarity=0.158 Sum_probs=27.8
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchh
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFN 104 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn 104 (366)
..+|+|+|||+|.-|+.+...+ .+.-+|+.+|+......
T Consensus 103 g~~VLDlcaG~G~kt~~la~~~---------------~~~g~V~a~D~~~~~l~ 141 (309)
T 2b9e_A 103 GSHVIDACAAPGNKTSHLAALL---------------KNQGKIFAFDLDAKRLA 141 (309)
T ss_dssp TCEEEESSCTTCHHHHHHHHHH---------------TTCSEEEEEESCHHHHH
T ss_pred CCEEEEeCCChhHHHHHHHHHh---------------CCCCEEEEEeCCHHHHH
Confidence 4799999999999998643322 12378999998654333
|
| >2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A* | Back alignment and structure |
|---|
Probab=90.09 E-value=0.15 Score=49.74 Aligned_cols=35 Identities=17% Similarity=0.278 Sum_probs=25.8
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCC
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTN 101 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~N 101 (366)
..+|+|+|||+|..++.+...+ +..+|+.+|+-..
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~~~----------------~~~~V~avDi~~~ 82 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFALET----------------PAEEVWLNDISED 82 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHHHS----------------SCSEEEEEESCHH
T ss_pred CCEEEECCCchhHHHHHHHHhC----------------CCCeEEEEECCHH
Confidence 5789999999999998632221 2267999998653
|
| >4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A* | Back alignment and structure |
|---|
Probab=90.01 E-value=0.67 Score=45.20 Aligned_cols=71 Identities=11% Similarity=0.121 Sum_probs=45.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc-
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS- 128 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~- 128 (366)
.-.+++|+|||.|.-|..+ .++ ...|+..|.-. + ...+.. .++
T Consensus 211 ~G~~vlDLGAaPGGWT~~l--------~~r----------g~~V~aVD~~~---------l---~~~l~~------~~~V 254 (375)
T 4auk_A 211 NGMWAVDLGACPGGWTYQL--------VKR----------NMWVYSVDNGP---------M---AQSLMD------TGQV 254 (375)
T ss_dssp TTCEEEEETCTTCHHHHHH--------HHT----------TCEEEEECSSC---------C---CHHHHT------TTCE
T ss_pred CCCEEEEeCcCCCHHHHHH--------HHC----------CCEEEEEEhhh---------c---Chhhcc------CCCe
Confidence 3589999999999999642 221 16899999632 1 111111 223
Q ss_pred eEEeccCCCcccccCCCCcccEEEccccccc
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHW 159 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~alhW 159 (366)
.|+ .++.+....+.+.+|+++|-.+.+|
T Consensus 255 ~~~---~~d~~~~~~~~~~~D~vvsDm~~~p 282 (375)
T 4auk_A 255 TWL---REDGFKFRPTRSNISWMVCDMVEKP 282 (375)
T ss_dssp EEE---CSCTTTCCCCSSCEEEEEECCSSCH
T ss_pred EEE---eCccccccCCCCCcCEEEEcCCCCh
Confidence 333 3566666667778999999777654
|
| >3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=89.82 E-value=0.076 Score=49.71 Aligned_cols=43 Identities=12% Similarity=0.173 Sum_probs=26.6
Q ss_pred chHHHhhHHHHHHHHHHHHHHHHHHHHhhhhcCCCceEEEeecCCCCcchHHH
Q 017747 16 TSYARNSSLQKKASDTVKHITLEALQQLYLEIDPKTINIADLGCSSGPNTLAI 68 (366)
Q Consensus 16 ~sY~~nS~~Q~~~~~~~~~~l~~ai~~l~~~~~~~~~~IaDlGCs~G~ns~~~ 68 (366)
.+|.+|-..+..++..+...+. .....+|+|+|||+|..|..+
T Consensus 18 k~~GQ~fL~d~~i~~~iv~~~~----------~~~~~~VLEIG~G~G~lt~~L 60 (279)
T 3uzu_A 18 KRFGQNFLVDHGVIDAIVAAIR----------PERGERMVEIGPGLGALTGPV 60 (279)
T ss_dssp CCCSCCEECCHHHHHHHHHHHC----------CCTTCEEEEECCTTSTTHHHH
T ss_pred ccCCccccCCHHHHHHHHHhcC----------CCCcCEEEEEccccHHHHHHH
Confidence 3555555555555544332221 123579999999999999864
|
| >3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A* | Back alignment and structure |
|---|
Probab=89.07 E-value=1.9 Score=40.70 Aligned_cols=20 Identities=15% Similarity=0.089 Sum_probs=17.0
Q ss_pred HHHHHHHhccC-ceEEEEeec
Q 017747 206 LRSRSEELVVG-GRMVLILLG 225 (366)
Q Consensus 206 L~~Ra~EL~~G-G~lvl~~~g 225 (366)
|..-.+-|+|| |.||+-++-
T Consensus 173 L~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 173 LENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp HHHHHHHCCTTCCEEEEEESS
T ss_pred HHHHHHHhcCCCCcEEEEecc
Confidence 66667889999 999999875
|
| >2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B* | Back alignment and structure |
|---|
Probab=88.64 E-value=0.57 Score=47.82 Aligned_cols=21 Identities=29% Similarity=0.490 Sum_probs=18.5
Q ss_pred HHHHHHHHHhccCceEEEEee
Q 017747 204 LFLRSRSEELVVGGRMVLILL 224 (366)
Q Consensus 204 ~FL~~Ra~EL~~GG~lvl~~~ 224 (366)
.|+..-.+-|+|||++++.++
T Consensus 293 ~Fl~~~l~~Lk~gGr~a~V~p 313 (541)
T 2ar0_A 293 CFMQHIIETLHPGGRAAVVVP 313 (541)
T ss_dssp HHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHhCCCCEEEEEec
Confidence 578888899999999999975
|
| >3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=87.00 E-value=2 Score=41.68 Aligned_cols=20 Identities=20% Similarity=0.212 Sum_probs=16.4
Q ss_pred ceEEEeecCCCCcchHHHHH
Q 017747 51 TINIADLGCSSGPNTLAIIK 70 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~ 70 (366)
..+|+|.|||+|...+.+..
T Consensus 196 ~~~vlDp~CGSGt~lieaa~ 215 (385)
T 3ldu_A 196 GRVLVDPMCGSGTILIEAAM 215 (385)
T ss_dssp TSCEEETTCTTCHHHHHHHH
T ss_pred CCeEEEcCCCCCHHHHHHHH
Confidence 47899999999998876543
|
| >3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B* | Back alignment and structure |
|---|
Probab=86.35 E-value=0.052 Score=49.87 Aligned_cols=34 Identities=18% Similarity=0.297 Sum_probs=24.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPT 100 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~ 100 (366)
...+|+|+|||+|..|..+ .+ .+..+|+.-|+-.
T Consensus 31 ~~~~VLDiG~G~G~lt~~L--------~~---------~~~~~v~avEid~ 64 (249)
T 3ftd_A 31 EGNTVVEVGGGTGNLTKVL--------LQ---------HPLKKLYVIELDR 64 (249)
T ss_dssp TTCEEEEEESCHHHHHHHH--------TT---------SCCSEEEEECCCH
T ss_pred CcCEEEEEcCchHHHHHHH--------HH---------cCCCeEEEEECCH
Confidence 3578999999999998742 11 1236888889854
|
| >3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str} | Back alignment and structure |
|---|
Probab=83.80 E-value=2.1 Score=41.78 Aligned_cols=21 Identities=19% Similarity=0.180 Sum_probs=16.4
Q ss_pred CceEEEeecCCCCcchHHHHH
Q 017747 50 KTINIADLGCSSGPNTLAIIK 70 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~ 70 (366)
...+|+|.|||+|...+....
T Consensus 201 ~~~~vlDp~CGSGt~~ieaa~ 221 (393)
T 3k0b_A 201 PDRPFYDPVCGSGTIPIEAAL 221 (393)
T ss_dssp TTSCEEETTCTTSHHHHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHH
Confidence 347899999999988775443
|
| >3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=83.40 E-value=3 Score=40.53 Aligned_cols=20 Identities=20% Similarity=0.275 Sum_probs=16.0
Q ss_pred ceEEEeecCCCCcchHHHHH
Q 017747 51 TINIADLGCSSGPNTLAIIK 70 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~ 70 (366)
...|+|.+||+|...+....
T Consensus 195 ~~~llDp~CGSGt~lIEAa~ 214 (384)
T 3ldg_A 195 DKPFVDPTCGSGTFCIEAAM 214 (384)
T ss_dssp TSCEEETTCTTSHHHHHHHH
T ss_pred CCeEEEeCCcCCHHHHHHHH
Confidence 47899999999988775543
|
| >3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A | Back alignment and structure |
|---|
Probab=81.55 E-value=1.9 Score=45.58 Aligned_cols=71 Identities=20% Similarity=0.247 Sum_probs=39.4
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHHHhhhhcCCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCC
Q 017747 19 ARNSSLQKKASDTVKHITLEALQQLYLEIDPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDL 98 (366)
Q Consensus 19 ~~nS~~Q~~~~~~~~~~l~~ai~~l~~~~~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDL 98 (366)
.+....|+++..+++.+..+ ..+..+|+|+|||+|+.++..+...-.+ ..+.+. +.......||..+-
T Consensus 387 vRy~~Y~~AI~~al~d~~~~---------~~~~~VVldVGaGtGpLs~~al~A~~~a-~~~~~~--~~~~~~~kVyAVEk 454 (745)
T 3ua3_A 387 IKYDVYGEAVVGALKDLGAD---------GRKTVVIYLLGGGRGPIGTKILKSEREY-NNTFRQ--GQESLKVKLYIVEK 454 (745)
T ss_dssp HHHHHHHHHHHHHHHHHHTT---------CCSEEEEEEESCTTCHHHHHHHHHHHHH-HHHHST--TSCCCEEEEEEEEC
T ss_pred hhHHHHHHHHHHHHHHhhcc---------cCCCcEEEEECCCCCHHHHHHHHHHHHh-Cccccc--cccccccEEEEEeC
Confidence 35556666665554443321 1246789999999999987644443211 111111 11222378999887
Q ss_pred CCC
Q 017747 99 PTN 101 (366)
Q Consensus 99 p~N 101 (366)
..|
T Consensus 455 np~ 457 (745)
T 3ua3_A 455 NPN 457 (745)
T ss_dssp CHH
T ss_pred ChH
Confidence 443
|
| >2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str} | Back alignment and structure |
|---|
Probab=80.97 E-value=1.3 Score=37.65 Aligned_cols=34 Identities=9% Similarity=0.148 Sum_probs=24.5
Q ss_pred CceEEEeecCCCCc-chHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCC
Q 017747 50 KTINIADLGCSSGP-NTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPT 100 (366)
Q Consensus 50 ~~~~IaDlGCs~G~-ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~ 100 (366)
.+.+|+|+|||.|. |+.. |.+. ..+.|+..|+-.
T Consensus 35 ~~~rVlEVG~G~g~~vA~~--------La~~---------~g~~V~atDInp 69 (153)
T 2k4m_A 35 PGTRVVEVGAGRFLYVSDY--------IRKH---------SKVDLVLTDIKP 69 (153)
T ss_dssp SSSEEEEETCTTCCHHHHH--------HHHH---------SCCEEEEECSSC
T ss_pred CCCcEEEEccCCChHHHHH--------HHHh---------CCCeEEEEECCc
Confidence 45799999999995 8864 4331 127888888753
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 366 | ||||
| d1m6ex_ | 359 | c.66.1.35 (X:) Salicylic acid carboxyl methyltrans | 1e-131 |
| >d1m6ex_ c.66.1.35 (X:) Salicylic acid carboxyl methyltransferase (SAMT) {Clarkia breweri [TaxId: 36903]} Length = 359 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Salicylic acid carboxyl methyltransferase (SAMT) domain: Salicylic acid carboxyl methyltransferase (SAMT) species: Clarkia breweri [TaxId: 36903]
Score = 377 bits (970), Expect = e-131
Identities = 154/373 (41%), Positives = 225/373 (60%), Gaps = 25/373 (6%)
Query: 1 MDVEKLFHMAGGTGPTSYARNSSLQKKASDTVKHITLEALQQLYL-EIDPKTINIADLGC 59
MDV ++ HM GG G SYA NS +Q++ K IT A+ LY + + IADLGC
Sbjct: 1 MDVRQVLHMKGGAGENSYAMNSFIQRQVISITKPITEAAITALYSGDTVTTRLAIADLGC 60
Query: 60 SSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRN 119
SSGPN L + + ++TVE +++ + +PE+ +LNDLP NDFN++F++LP +
Sbjct: 61 SSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIEND---- 116
Query: 120 ERGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGN 179
+I G PGSFYGRLFP N+LHFIHSS SL WLS+VP +G NKGN
Sbjct: 117 -----VDGVCFINGVPGSFYGRLFPRNTLHFIHSSYSLMWLSQVP------IGIESNKGN 165
Query: 180 IYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFF 239
IY++ + P +V AY+KQFQED LFLR R++E+V GGRMVL +LGR D
Sbjct: 166 IYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILGRRSEDRASTECCLI 225
Query: 240 WELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLDMFQV--- 296
W+LL+ +L +VS+G IE+EK+ ++ Y PS E+E E+ +EGSF +D ++ ++
Sbjct: 226 WQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIEASEIYWS 285
Query: 297 ----ERQGHDRGESYGSAVARTVRAIQESTIIHHFGIGEGVLDNLFEIYGRLVDEEMAKE 352
+ G E G VAR +RA+ E ++ HF GE +++++F Y L+ E M+KE
Sbjct: 286 SCTKDGDGGGSVEEEGYNVARCMRAVAEPLLLDHF--GEAIIEDVFHRYKLLIIERMSKE 343
Query: 353 EIKPLTFVLLLRK 365
+ K + ++ L +
Sbjct: 344 KTKFINVIVSLIR 356
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 366 | |||
| d1m6ex_ | 359 | Salicylic acid carboxyl methyltransferase (SAMT) { | 100.0 | |
| d1im8a_ | 225 | Hypothetical protein HI0319 (YecO) {Haemophilus in | 99.29 | |
| d1vl5a_ | 231 | Hypothetical protein BH2331 {Bacillus halodurans [ | 99.26 | |
| d2a14a1 | 257 | Indolethylamine N-methyltransferase, INMT {Human ( | 99.23 | |
| d1xxla_ | 234 | Hypothetical protein YcgJ {Bacillus subtilis [TaxI | 99.21 | |
| d1ve3a1 | 226 | Hypothetical protein PH0226 {Archaeon Pyrococcus h | 99.2 | |
| d1jqea_ | 280 | Histamine methyltransferase {Human (Homo sapiens) | 99.15 | |
| d1vlma_ | 208 | Possible histamine N-methyltransferase TM1293 {The | 99.14 | |
| d2o57a1 | 282 | Putative sarcosine dimethylglycine methyltransfera | 99.13 | |
| d1xtpa_ | 254 | Hypothetical protein Lmaj004091aaa (LmjF30.0810) { | 99.1 | |
| d2fk8a1 | 280 | Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri | 99.09 | |
| d1tw3a2 | 253 | Carminomycin 4-O-methyltransferase {Streptomyces p | 99.06 | |
| d2ex4a1 | 222 | Adrenal gland protein AD-003 (C9orf32) {Human (Hom | 99.02 | |
| d2g72a1 | 263 | Phenylethanolamine N-methyltransferase, PNMTase {H | 99.0 | |
| d1nkva_ | 245 | Hypothetical Protein YjhP {Escherichia coli [TaxId | 98.99 | |
| d1p91a_ | 268 | rRNA methyltransferase RlmA {Escherichia coli [Tax | 98.94 | |
| d1kpia_ | 291 | CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]} | 98.94 | |
| d1pjza_ | 201 | Thiopurine S-methyltransferase {Pseudomonas syring | 98.92 | |
| d2p7ia1 | 225 | Hypothetical protein ECA1738 {Erwinia carotovora [ | 98.91 | |
| d1qzza2 | 256 | Aclacinomycin-10-hydroxylase RdmB {Streptomyces pu | 98.83 | |
| d1wzna1 | 251 | Hypothetical methyltransferase PH1305 {Archaeon Py | 98.8 | |
| d1kpga_ | 285 | CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]} | 98.79 | |
| d2bzga1 | 229 | Thiopurine S-methyltransferase {Human (Homo sapien | 98.77 | |
| d2avna1 | 246 | Hypothetical methyltransferase TM1389 {Thermotoga | 98.74 | |
| d2i6ga1 | 198 | Putative methyltransferase TehB {Salmonella typhim | 98.7 | |
| d1y8ca_ | 246 | Putative methyltransferase CAC2371 {Clostridium ac | 98.65 | |
| d1ri5a_ | 252 | mRNA cap (Guanine N-7) methyltransferase {Fungus ( | 98.62 | |
| d2gh1a1 | 281 | Methyltransferase BC2162 {Bacillus cereus [TaxId: | 98.53 | |
| d1fp1d2 | 244 | Chalcone O-methyltransferase {Alfalfa (Medicago sa | 98.5 | |
| d1fp2a2 | 244 | Isoflavone O-methyltransferase {Alfalfa (Medicago | 98.35 | |
| d1xvaa_ | 292 | Glycine N-methyltransferase {Rat (Rattus norvegicu | 98.35 | |
| d2fcaa1 | 204 | tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil | 98.29 | |
| d1dl5a1 | 213 | Protein-L-isoaspartyl O-methyltransferase {Thermot | 98.27 | |
| d1kyza2 | 243 | Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltra | 98.23 | |
| d1i1na_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Human ( | 98.17 | |
| d1yzha1 | 204 | tRNA (guanine-N(7)-)-methyltransferase TrmB {Strep | 98.16 | |
| d1g8sa_ | 230 | Fibrillarin homologue {Archaeon Methanococcus jann | 98.03 | |
| d1yb2a1 | 250 | Hypothetical protein Ta0852 {Thermoplasma acidophi | 98.01 | |
| d1oria_ | 316 | Protein arginine N-methyltransferase 1, PRMT1 {Rat | 98.0 | |
| d1g6q1_ | 328 | Arginine methyltransferase, HMT1 {Baker's yeast (S | 97.95 | |
| d1dusa_ | 194 | Hypothetical protein MJ0882 {Archaeon Methanococcu | 97.93 | |
| d1i9ga_ | 264 | Probable methyltransferase Rv2118c {Mycobacterium | 97.92 | |
| d1g8aa_ | 227 | Fibrillarin homologue {Archaeon Pyrococcus horikos | 97.83 | |
| d2nxca1 | 254 | PrmA-like protein TTHA0656 (TT0836) {Thermus therm | 97.82 | |
| d1nt2a_ | 209 | Fibrillarin homologue {Archaeon Archaeoglobus fulg | 97.81 | |
| d2fyta1 | 311 | Protein arginine N-methyltransferase 3, PRMT3 {Hum | 97.74 | |
| d1l3ia_ | 186 | Precorrin-6Y methyltransferase (CbiT) {Archaeon Me | 97.59 | |
| d1r18a_ | 223 | Protein-L-isoaspartyl O-methyltransferase {Fruit f | 97.53 | |
| d1zx0a1 | 229 | Guanidinoacetate methyltransferase {Human (Homo sa | 97.52 | |
| d1vbfa_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Sulfolo | 97.45 | |
| d1u2za_ | 406 | Catalytic, N-terminal domain of histone methyltran | 97.43 | |
| d1nw3a_ | 328 | Catalytic, N-terminal domain of histone methyltran | 97.33 | |
| d1o54a_ | 266 | Hypothetical protein TM0748 {Thermotoga maritima [ | 97.32 | |
| d2b3ta1 | 274 | N5-glutamine methyltransferase, HemK {Escherichia | 97.19 | |
| d1af7a2 | 193 | Chemotaxis receptor methyltransferase CheR, C-term | 97.19 | |
| d2b25a1 | 324 | Hypothetical protein FLJ20628 {Human (Homo sapiens | 97.05 | |
| d1jg1a_ | 215 | Protein-L-isoaspartyl O-methyltransferase {Archaeo | 96.39 | |
| d1wxxa2 | 318 | Hypothetical protein TTHA1280, middle and C-termin | 96.3 | |
| d1m6ya2 | 192 | TM0872, methyltransferase domain {Thermotoga marit | 95.08 | |
| d2f8la1 | 328 | Hypothetical protein Lmo1582 {Listeria monocytogen | 94.35 | |
| d2as0a2 | 324 | Hypothetical protein PH1915, middle and C-terminal | 94.18 | |
| d1nv8a_ | 271 | N5-glutamine methyltransferase, HemK {Thermotoga m | 93.88 | |
| d2ih2a1 | 223 | DNA methylase TaqI, N-terminal domain {Thermus aqu | 93.45 | |
| d2h00a1 | 250 | Methyltransferase 10 domain containing protein MET | 93.36 | |
| d2frna1 | 260 | Hypothetical protein PH0793 {Pyrococcus horikoshii | 92.67 | |
| d2igta1 | 309 | Putative methyltransferase Atu0340 {Agrobacterium | 91.17 | |
| d1ws6a1 | 171 | Methyltransferase TTHA0928 {Thermus thermophilus [ | 91.1 | |
| d2b78a2 | 317 | Hypothetical protein SMu776, middle and C-terminal | 88.72 | |
| d1yuba_ | 245 | rRNA adenine dimethylase {Streptococcus pneumoniae | 88.29 | |
| d1ne2a_ | 197 | Hypothetical protein Ta1320 {Archaeon Thermoplasma | 88.26 | |
| d1qama_ | 235 | rRNA adenine dimethylase {Bacillus subtilis, Ermc' | 87.86 | |
| d1wy7a1 | 201 | Hypothetical protein PH1948 {Archaeon Pyrococcus h | 86.83 | |
| d1uira_ | 312 | Spermidine synthase {Thermus thermophilus [TaxId: | 86.13 | |
| d2esra1 | 152 | Putative methyltransferase SPy1538 {Streptococcus | 85.35 |
| >d1m6ex_ c.66.1.35 (X:) Salicylic acid carboxyl methyltransferase (SAMT) {Clarkia breweri [TaxId: 36903]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Salicylic acid carboxyl methyltransferase (SAMT) domain: Salicylic acid carboxyl methyltransferase (SAMT) species: Clarkia breweri [TaxId: 36903]
Probab=100.00 E-value=5.3e-105 Score=780.37 Aligned_cols=348 Identities=44% Similarity=0.762 Sum_probs=326.6
Q ss_pred CCccceeccCCCCCcchHHHhhHHHHHHHHHHHHHHHHHHHHhhhh-cCCCceEEEeecCCCCcchHHHHHHHHHHHHHH
Q 017747 1 MDVEKLFHMAGGTGPTSYARNSSLQKKASDTVKHITLEALQQLYLE-IDPKTINIADLGCSSGPNTLAIIKDFVQTVEMT 79 (366)
Q Consensus 1 ~~~~~~l~M~gg~g~~sY~~nS~~Q~~~~~~~~~~l~~ai~~l~~~-~~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~ 79 (366)
|+++++||||||+|++||++||.+|+++++.++|+|++||.+++.. ..+++++|||||||+|+||+.+|+.||++|+++
T Consensus 1 m~~~~~l~M~gG~G~~SYa~NS~~Q~~~i~~~kp~leeai~~~~~~~~~~~~~~IADlGCS~G~Ntl~~v~~iI~~i~~~ 80 (359)
T d1m6ex_ 1 MDVRQVLHMKGGAGENSYAMNSFIQRQVISITKPITEAAITALYSGDTVTTRLAIADLGCSSGPNALFAVTELIKTVEEL 80 (359)
T ss_dssp CCCHHHHCCCCCTTSTTTTSSCHHHHHHHHHTHHHHHHHHHHHHSSSSSSSEECCEEESCCSSTTTTTGGGTTHHHHHHH
T ss_pred CCccEeeccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCceEEEEeCCCCCccHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999998654 356789999999999999999999999999999
Q ss_pred hhhhhc-CCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceEEeccCCCcccccCCCCcccEEEcccccc
Q 017747 80 SREILQ-NPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLH 158 (366)
Q Consensus 80 ~~~~~~-~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~~lfp~~s~~~~~S~~alh 158 (366)
|++. + .++|++||||||||+||||+||++||... .. .++||++|||||||+||||++|+||+||++|||
T Consensus 81 ~~~~-~~~~~pe~qvf~nDLP~NDFNtLF~~L~~~~--------~~-~~~~f~~gvpGSFY~rLfP~~Slh~~~Ss~alH 150 (359)
T d1m6ex_ 81 RKKM-GRENSPEYQIFLNDLPGNDFNAIFRSLPIEN--------DV-DGVCFINGVPGSFYGRLFPRNTLHFIHSSYSLM 150 (359)
T ss_dssp HHSS-SCSSCCEEEEEEEECTTSCHHHHHTTTTTSC--------SC-TTCEEEEEEESCSSSCCSCTTCBSCEEEESCTT
T ss_pred HHhc-CCCCCCeEEEEeCCCCcchHHHHHHhccccc--------cC-CCCeEEEecCCchhhhcCCCCceEEeeehhhhh
Confidence 8765 4 35789999999999999999999998421 11 568999999999999999999999999999999
Q ss_pred cccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEEEeecCCCCCCCCCCchh
Q 017747 159 WLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSF 238 (366)
Q Consensus 159 Wls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~ 238 (366)
|||++|+.+.+ |||+||+..+++++|.+||++||++||++||++||+||+|||+|||+++||++.++.+++.+.
T Consensus 151 WLS~vP~~l~~------n~~~i~~~~~~~~~v~~ay~~Qf~~D~~~FL~~Ra~ELv~GG~mvl~~~gr~~~~~~~~~~~~ 224 (359)
T d1m6ex_ 151 WLSQVPIGIES------NKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILGRRSEDRASTECCL 224 (359)
T ss_dssp BCSSCCSCCCC------CTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEEECSSSSSSSTTTST
T ss_pred hhhcCCccccC------CCCcEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeccCCCCCCCCccch
Confidence 99999998855 999999999999999999999999999999999999999999999999999999888877788
Q ss_pred HHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEeeEEEEeeccCCCCc-------ccchhhhH
Q 017747 239 FWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLDMFQVERQGHDR-------GESYGSAV 311 (366)
Q Consensus 239 ~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~~~e~~~~~~~~~~d-------~~~~~~~~ 311 (366)
+|+++.++|+|||.||+|++||+|+||+|+|+||++|++++|+++|+|+|+++|.++.+|++..+ ...+|+.+
T Consensus 225 ~~~~l~~al~dmv~eGlI~eek~dsfn~P~Y~ps~eEv~~~ie~~gsF~i~~~e~~~~~~~~~~~~~~~~~d~~~~~~~~ 304 (359)
T d1m6ex_ 225 IWQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIEASEIYWSSCTKDGDGGGSVEEEGYNV 304 (359)
T ss_dssp TTHHHHHHHHHHHHTTCSCCSTTGGGCCCCBCCCSHHHHHHHHHTTTBCCEEEEEEEEETTCCSSCTTCCSSTTTTTTHH
T ss_pred HHHHHHHHHHHHHHcCCCCHHHHHhccCccccCCHHHHHHHhccCCCeeeeeeEeeecccccccccccccccHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999977432 25688999
Q ss_pred hhhHHHhhhhHHHhhcCCCcchHHHHHHHHHHHHHHHHHhcCCCcEEEEEEEeeC
Q 017747 312 ARTVRAIQESTIIHHFGIGEGVLDNLFEIYGRLVDEEMAKEEIKPLTFVLLLRKL 366 (366)
Q Consensus 312 ~~~~Ra~~e~~l~~~~g~~~~i~d~lf~r~~~~~~~~~~~~~~~~~~~~~~l~k~ 366 (366)
++++|||+||+|++||| ++|+|+||+||+++++++++.+++++++++++|+||
T Consensus 305 a~~~RA~~e~~l~~hfg--~~i~D~lF~r~~~~v~~~~~~~~~~~~~~~~sL~rK 357 (359)
T d1m6ex_ 305 ARCMRAVAEPLLLDHFG--EAIIEDVFHRYKLLIIERMSKEKTKFINVIVSLIRK 357 (359)
T ss_dssp HHHHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHHSSCCEEEEEEEEEEBC
T ss_pred HHHHHHHHHHHHHHHcC--hHHHHHHHHHHHHHHHhhHhhcCCceEEEEEEEEec
Confidence 99999999999999999 999999999999999999999999999999999997
|
| >d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical protein HI0319 (YecO) domain: Hypothetical protein HI0319 (YecO) species: Haemophilus influenzae [TaxId: 727]
Probab=99.29 E-value=1.3e-11 Score=110.28 Aligned_cols=167 Identities=19% Similarity=0.132 Sum_probs=101.4
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+...+|+|+|||+|..|.. |.+. -..|..+|+.-|+...+....-+.+. . .+. ..+
T Consensus 38 ~~~~~vLDlGCGtG~~~~~--------l~~~------~~~~~~~v~giD~S~~ml~~A~~~~~-------~-~~~--~~~ 93 (225)
T d1im8a_ 38 TADSNVYDLGCSRGAATLS--------ARRN------INQPNVKIIGIDNSQPMVERCRQHIA-------A-YHS--EIP 93 (225)
T ss_dssp CTTCEEEEESCTTCHHHHH--------HHHT------CCCSSCEEEEECSCHHHHHHHHHHHH-------T-SCC--SSC
T ss_pred CCCCEEEEeccchhhHHHH--------HHHh------hcCCCCceEEeCCCHHHHHHHHHHhH-------h-hcc--cch
Confidence 4457999999999999875 3221 13467999999998754433322111 1 111 112
Q ss_pred eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
+... -+++. -+|.+..|++++++++||++. +|...+|+.
T Consensus 94 ~~~~--~~d~~--~~~~~~~d~i~~~~~l~~~~~-------------------------------------~d~~~~l~~ 132 (225)
T d1im8a_ 94 VEIL--CNDIR--HVEIKNASMVILNFTLQFLPP-------------------------------------EDRIALLTK 132 (225)
T ss_dssp EEEE--CSCTT--TCCCCSEEEEEEESCGGGSCG-------------------------------------GGHHHHHHH
T ss_pred hhhc--cchhh--ccccccceeeEEeeeccccCh-------------------------------------hhHHHHHHH
Confidence 2211 13442 246778899999999999743 244567888
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhc----ccCccccCCCHHHHHHHHhhcC
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLV----AYHAHFYAPSKEEIEGEVGREG 284 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d----~f~~P~y~ps~eEv~~~i~~~g 284 (366)
-.+-|+|||.|++.-....+.. ..-+.....+..+....-.++.+.. .+..-.+..|.+|+...++++|
T Consensus 133 i~~~LkpgG~li~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~L~~aG 205 (225)
T d1im8a_ 133 IYEGLNPNGVLVLSEKFRFEDT-------KINHLLIDLHHQFKRANGYSELEVSQKRTALENVMRTDSIETHKVRLKNVG 205 (225)
T ss_dssp HHHHEEEEEEEEEEEECCCSSH-------HHHHHHHHHHHHHHHHTTGGGSTTHHHHHHHHHHCCCCCHHHHHHHHHHHT
T ss_pred HHHhCCCCceeecccccccccc-------hhhhHHHHHHHHHHHHcCCCHHHHHHHHHHhhcccCCCCHHHHHHHHHHcC
Confidence 8999999999999865554321 1122333334444333223333222 2223345679999999999999
Q ss_pred ceEE
Q 017747 285 SFKL 288 (366)
Q Consensus 285 sf~i 288 (366)
|+-
T Consensus 206 -F~~ 208 (225)
T d1im8a_ 206 -FSQ 208 (225)
T ss_dssp -CSE
T ss_pred -CCc
Confidence 864
|
| >d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein BH2331 species: Bacillus halodurans [TaxId: 86665]
Probab=99.26 E-value=2.2e-11 Score=108.32 Aligned_cols=157 Identities=17% Similarity=0.206 Sum_probs=99.4
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
....+|+|+|||+|..|..+ .++ + .+|+..|+..+.-...-+.+ ...+ .++
T Consensus 14 ~~~~rVLDiGcG~G~~~~~l--------~~~-----~-----~~v~gvD~s~~~i~~A~~~~--------~~~~---~~~ 64 (231)
T d1vl5a_ 14 KGNEEVLDVATGGGHVANAF--------APF-----V-----KKVVAFDLTEDILKVARAFI--------EGNG---HQQ 64 (231)
T ss_dssp CSCCEEEEETCTTCHHHHHH--------GGG-----S-----SEEEEEESCHHHHHHHHHHH--------HHTT---CCS
T ss_pred CCcCEEEEecccCcHHHHHH--------HHh-----C-----CEEEEEECCHHHHhhhhhcc--------cccc---ccc
Confidence 34689999999999998742 121 1 46888898764322211111 1111 234
Q ss_pred e-EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 129 ~-f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
+ |.. +++.+-.||++++|+++|..++||+.+ | ..+|+
T Consensus 65 i~~~~---~d~~~l~~~~~~fD~v~~~~~l~~~~d-~--------------------------------------~~~l~ 102 (231)
T d1vl5a_ 65 VEYVQ---GDAEQMPFTDERFHIVTCRIAAHHFPN-P--------------------------------------ASFVS 102 (231)
T ss_dssp EEEEE---CCC-CCCSCTTCEEEEEEESCGGGCSC-H--------------------------------------HHHHH
T ss_pred ccccc---cccccccccccccccccccccccccCC-H--------------------------------------HHHHH
Confidence 3 444 466554589999999999999999754 2 23466
Q ss_pred HHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceE
Q 017747 208 SRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFK 287 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~ 287 (366)
.-++-|+|||++++......+. ..++.+...+.... +.. ...+.+.+++.+.+++.| |+
T Consensus 103 ~~~r~LkpgG~l~i~~~~~~~~--------~~~~~~~~~~~~~~----------~~~--~~~~~~~~~~~~~l~~aG-f~ 161 (231)
T d1vl5a_ 103 EAYRVLKKGGQLLLVDNSAPEN--------DAFDVFYNYVEKER----------DYS--HHRAWKKSDWLKMLEEAG-FE 161 (231)
T ss_dssp HHHHHEEEEEEEEEEEEEBCSS--------HHHHHHHHHHHHHH----------CTT--CCCCCBHHHHHHHHHHHT-CE
T ss_pred HHHHhcCCCcEEEEEeCCCCCC--------HHHHHHHHHHHhhc----------ccC--cccCCCHHHHHHHHHHCC-CE
Confidence 7799999999999987655432 23333333332211 111 123557899999999999 99
Q ss_pred EeeEEEEeec
Q 017747 288 LDQLDMFQVE 297 (366)
Q Consensus 288 i~~~e~~~~~ 297 (366)
+.+++.+...
T Consensus 162 ~~~~~~~~~~ 171 (231)
T d1vl5a_ 162 LEELHCFHKT 171 (231)
T ss_dssp EEEEEEEEEE
T ss_pred EEEEEEeecC
Confidence 8877766543
|
| >d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase, INMT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arylamine N-methyltransferase domain: Indolethylamine N-methyltransferase, INMT species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.23 E-value=2.1e-11 Score=110.18 Aligned_cols=184 Identities=14% Similarity=0.052 Sum_probs=114.4
Q ss_pred HHHHHHHHHhhhhcCCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchh
Q 017747 34 HITLEALQQLYLEIDPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDF 113 (366)
Q Consensus 34 ~~l~~ai~~l~~~~~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~ 113 (366)
+.+...+.++......+..+|+|+|||+|..++.+ .. ..--+|+..|+..+.-..+-+.+...
T Consensus 35 ~~~~~~~~~~~~~~~~~g~~vLDlGcG~G~~~~~~--------~~---------~~~~~v~giD~S~~~i~~a~~~~~~~ 97 (257)
T d2a14a1 35 KFNLECLHKTFGPGGLQGDTLIDIGSGPTIYQVLA--------AC---------DSFQDITLSDFTDRNREELEKWLKKE 97 (257)
T ss_dssp HHHHHHHHHHHSTTSCCEEEEEESSCTTCCGGGTT--------GG---------GTEEEEEEEESCHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhcccCCCCCEEEEECCCCCHhHHHH--------hc---------cccCcEEEecCCHHHHHHHHHHHhhc
Confidence 33334444333333445789999999999988631 01 11147899998876554443222110
Q ss_pred HH---------HHhhhcCC------------CCCCceEEeccCCCcccccCCCCcccEEEcccccccccCCCCccccccc
Q 017747 114 HR---------QLRNERGG------------GSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMG 172 (366)
Q Consensus 114 ~~---------~~~~~~~~------------~~~~~~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~ 172 (366)
.. ....-.+. ......-...+..+.....++.+++|+++|..++||+...
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~~l~~~~~~--------- 168 (257)
T d2a14a1 98 PGAYDWTPAVKFACELEGNSGRWEEKEEKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCS--------- 168 (257)
T ss_dssp TTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSS---------
T ss_pred cccchhhhHHHHHHHhccccchHHHHHHHHhhhhhcccccccccccccccccCCcccEEeehhhHHHhccc---------
Confidence 00 00000000 0000111222334444567899999999999999997542
Q ss_pred CCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 017747 173 ESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVS 252 (366)
Q Consensus 173 ~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~ 252 (366)
..|+..+|+..++-|||||+|++......+. +
T Consensus 169 --------------------------~~~~~~~l~~i~~~LkpGG~li~~~~~~~~~--------~-------------- 200 (257)
T d2a14a1 169 --------------------------LDAYRAALCNLASLLKPGGHLVTTVTLRLPS--------Y-------------- 200 (257)
T ss_dssp --------------------------HHHHHHHHHHHHTTEEEEEEEEEEEESSCCE--------E--------------
T ss_pred --------------------------HHHHHHHHHHHHhccCCCcEEEEEEeccccc--------c--------------
Confidence 2467788899999999999999987754331 1
Q ss_pred cCccchhhhcccCccccCCCHHHHHHHHhhcCceEEeeEEEEeeccC
Q 017747 253 QGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLDMFQVERQ 299 (366)
Q Consensus 253 eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~~~e~~~~~~~ 299 (366)
.......+.+..+.++++++++++| |+|..++...+.+.
T Consensus 201 -------~~~~~~~~~~~~~~~~~~~~l~~aG-f~v~~~~~~~~~~~ 239 (257)
T d2a14a1 201 -------MVGKREFSCVALEKGEVEQAVLDAG-FDIEQLLHSPQSYS 239 (257)
T ss_dssp -------EETTEEEECCCCCHHHHHHHHHHTT-EEEEEEEEECCCCC
T ss_pred -------eeccccccccCCCHHHHHHHHHHCC-CEEEEEEEeccccc
Confidence 0112345677889999999999999 99999988766653
|
| >d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein YcgJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.21 E-value=2.6e-11 Score=108.77 Aligned_cols=157 Identities=17% Similarity=0.170 Sum_probs=98.5
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..|.. +.++ + .+|+..|+..+.-+..-+.+. ..+. ....
T Consensus 16 ~~~rILDiGcGtG~~~~~--------la~~-----~-----~~v~gvD~S~~~l~~A~~~~~--------~~~~--~~~~ 67 (234)
T d1xxla_ 16 AEHRVLDIGAGAGHTALA--------FSPY-----V-----QECIGVDATKEMVEVASSFAQ--------EKGV--ENVR 67 (234)
T ss_dssp TTCEEEEESCTTSHHHHH--------HGGG-----S-----SEEEEEESCHHHHHHHHHHHH--------HHTC--CSEE
T ss_pred CCCEEEEeCCcCcHHHHH--------HHHh-----C-----CeEEEEeCChhhhhhhhhhhc--------cccc--cccc
Confidence 358999999999999874 2221 1 468889987654333222111 1111 1123
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
|+.+ +..+-.||++++|+++|+.++||+.+. ..+|+..
T Consensus 68 ~~~~---d~~~~~~~~~~fD~v~~~~~l~~~~d~---------------------------------------~~~l~~~ 105 (234)
T d1xxla_ 68 FQQG---TAESLPFPDDSFDIITCRYAAHHFSDV---------------------------------------RKAVREV 105 (234)
T ss_dssp EEEC---BTTBCCSCTTCEEEEEEESCGGGCSCH---------------------------------------HHHHHHH
T ss_pred cccc---ccccccccccccceeeeeceeecccCH---------------------------------------HHHHHHH
Confidence 4443 555545899999999999999997542 2346677
Q ss_pred HHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEe
Q 017747 210 SEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLD 289 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~ 289 (366)
.+-|+|||+++++.....+. ...+.+...+.... + .......+.+++...+++.| |.+.
T Consensus 106 ~r~LkpgG~~~~~~~~~~~~--------~~~~~~~~~~~~~~----------~--~~~~~~~~~~~~~~~~~~~g-f~~~ 164 (234)
T d1xxla_ 106 ARVLKQDGRFLLVDHYAPED--------PVLDEFVNHLNRLR----------D--PSHVRESSLSEWQAMFSANQ-LAYQ 164 (234)
T ss_dssp HHHEEEEEEEEEEEECBCSS--------HHHHHHHHHHHHHH----------C--TTCCCCCBHHHHHHHHHHTT-EEEE
T ss_pred HHeeCCCcEEEEEEcCCCCC--------HHHHHHHHHHHhhC----------C--CcccccCCHHHHHHHHHHCC-Ccee
Confidence 89999999999987665432 12222222222111 1 11223347899999999999 9988
Q ss_pred eEEEEeec
Q 017747 290 QLDMFQVE 297 (366)
Q Consensus 290 ~~e~~~~~ 297 (366)
+++.+..+
T Consensus 165 ~~~~~~~~ 172 (234)
T d1xxla_ 165 DIQKWNLP 172 (234)
T ss_dssp EEEEEEEE
T ss_pred EEEEeeCc
Confidence 87776543
|
| >d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical protein PH0226 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.20 E-value=8.9e-12 Score=109.90 Aligned_cols=130 Identities=15% Similarity=0.236 Sum_probs=88.0
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHHHhhhhcCCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCC
Q 017747 19 ARNSSLQKKASDTVKHITLEALQQLYLEIDPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDL 98 (366)
Q Consensus 19 ~~nS~~Q~~~~~~~~~~l~~ai~~l~~~~~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDL 98 (366)
+.+...++.-+..+.+++++.+ ++..+|+|+|||+|..|..+ .+. ..+|+..|+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~l--------~~~~~ILDiGcG~G~~~~~l--------a~~----------~~~v~giD~ 67 (226)
T d1ve3a1 14 DINSQEYRSRIETLEPLLMKYM--------KKRGKVLDLACGVGGFSFLL--------EDY----------GFEVVGVDI 67 (226)
T ss_dssp CTTSHHHHHHHHHHHHHHHHSC--------CSCCEEEEETCTTSHHHHHH--------HHT----------TCEEEEEES
T ss_pred HhhHHHHHHHHHHHHHHHHHhc--------CCCCEEEEECCCcchhhhhH--------hhh----------hcccccccc
Confidence 3455556666777777777642 34579999999999988742 221 267899998
Q ss_pred CCCchhHHHhhCchhHHHHhhhcCCCCCCceEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccc
Q 017747 99 PTNDFNSVFKALPDFHRQLRNERGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKG 178 (366)
Q Consensus 99 p~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg 178 (366)
..+.....-+.+. + .+ ....++.+ +..+-.++++++|+++|+.++||++.
T Consensus 68 S~~~i~~ak~~~~-------~-~~---~~~~~~~~---d~~~l~~~~~~fD~I~~~~~l~~~~~---------------- 117 (226)
T d1ve3a1 68 SEDMIRKAREYAK-------S-RE---SNVEFIVG---DARKLSFEDKTFDYVIFIDSIVHFEP---------------- 117 (226)
T ss_dssp CHHHHHHHHHHHH-------H-TT---CCCEEEEC---CTTSCCSCTTCEEEEEEESCGGGCCH----------------
T ss_pred cccchhhhhhhhc-------c-cc---cccccccc---ccccccccCcCceEEEEecchhhCCh----------------
Confidence 7654332221111 1 11 12334443 45444589999999999999999632
Q ss_pred cEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEEEeec
Q 017747 179 NIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLG 225 (366)
Q Consensus 179 ~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~lvl~~~g 225 (366)
.|+..+|+.-++-|+|||+|++.+..
T Consensus 118 ---------------------~d~~~~l~~i~~~LkpgG~lii~~~~ 143 (226)
T d1ve3a1 118 ---------------------LELNQVFKEVRRVLKPSGKFIMYFTD 143 (226)
T ss_dssp ---------------------HHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ---------------------hHHHHHHHHHHHHcCcCcEEEEEEcC
Confidence 35667788999999999999998764
|
| >d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Histamine methyltransferase domain: Histamine methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.15 E-value=5.7e-11 Score=109.33 Aligned_cols=187 Identities=13% Similarity=0.102 Sum_probs=105.2
Q ss_pred hHHHhhHHHHHHHHHHHHHHHHHHHHhhhhc--CCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEE
Q 017747 17 SYARNSSLQKKASDTVKHITLEALQQLYLEI--DPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFY 94 (366)
Q Consensus 17 sY~~nS~~Q~~~~~~~~~~l~~ai~~l~~~~--~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~ 94 (366)
.|-+||.-.+...+ ++++.+..+.... ....++|||+|||+|..|..++..+. .++ +...+.++
T Consensus 9 ~~~~~s~~~~~~~~----~~~~~l~~~l~~l~~~~~~~~VLDiGcG~G~~~~~ll~~l~----~~~------~~~~~~~~ 74 (280)
T d1jqea_ 9 RFLNHSTEHQCMQE----FMDKKLPGIIGRIGDTKSEIKILSIGGGAGEIDLQILSKVQ----AQY------PGVCINNE 74 (280)
T ss_dssp HHHHTBSHHHHHHH----HHHHTHHHHTTTTTTTCSEEEEEEETCTTSHHHHHHHHHHH----HHS------TTCEEEEE
T ss_pred HHHHhCcHHHHHHH----HHHHHHHHHHHHhccCCCCCeEEEEcCCCCHHHHHHHHHhh----hhc------cCCceEEE
Confidence 35556555444333 3444444333322 24568999999999998876555442 221 23347788
Q ss_pred ecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceEEeccCCCc------ccccCCCCcccEEEcccccccccCCCCccc
Q 017747 95 LNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVYIAGYPGSF------YGRLFPNNSLHFIHSSNSLHWLSKVPPTLY 168 (366)
Q Consensus 95 ~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~~~vpgSF------y~~lfp~~s~~~~~S~~alhWls~~p~~~~ 168 (366)
..|...+....+-+.+... .. .+.+-+......+ ....++++++|+++++.++||+.+.+
T Consensus 75 ~vD~s~~~l~~a~~~~~~~--------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~I~~~~~l~~~~d~~---- 140 (280)
T d1jqea_ 75 VVEPSAEQIAKYKELVAKI--------SN--LENVKFAWHKETSSEYQSRMLEKKELQKWDFIHMIQMLYYVKDIP---- 140 (280)
T ss_dssp EECCCHHHHHHHHHHHTTC--------CS--CTTEEEEEECSCHHHHHHHHTTSSSCCCEEEEEEESCGGGCSCHH----
T ss_pred EEeCcHHHHHHHHHHHhhc--------cc--cccccccchhhhhhhhcchhcccCCCCceeEEEEccceecCCCHH----
Confidence 8897654333322221110 00 1122111111111 13457899999999999999975521
Q ss_pred ccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHH
Q 017747 169 NEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLA 248 (366)
Q Consensus 169 ~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~ 248 (366)
.+|+.-.+-|+|||.|+++....++ ...+ .|.
T Consensus 141 -----------------------------------~~l~~l~~~LkpgG~l~i~~~~~~~---------~~~~----l~~ 172 (280)
T d1jqea_ 141 -----------------------------------ATLKFFHSLLGTNAKMLIIVVSGSS---------GWDK----LWK 172 (280)
T ss_dssp -----------------------------------HHHHHHHHTEEEEEEEEEEEECTTS---------HHHH----HHH
T ss_pred -----------------------------------HHHHHHHhhCCCCCEEEEEEecCcc---------hHHH----HHH
Confidence 3466778999999999998765432 1222 233
Q ss_pred HHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEE
Q 017747 249 ILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKL 288 (366)
Q Consensus 249 ~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i 288 (366)
.+...- .+. ....+.+.+++..++++.| |..
T Consensus 173 ~~~~~~------~~~--~~~~~~~~~~~~~~L~~~G-~~~ 203 (280)
T d1jqea_ 173 KYGSRF------PQD--DLCQYITSDDLTQMLDNLG-LKY 203 (280)
T ss_dssp HHGGGS------CCC--TTSCCCCHHHHHHHHHHHT-CCE
T ss_pred HHHHhc------CCC--cccccCCHHHHHHHHHHCC-Cce
Confidence 321110 011 1123567899999999999 654
|
| >d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Possible histamine N-methyltransferase TM1293 species: Thermotoga maritima [TaxId: 2336]
Probab=99.14 E-value=1.1e-09 Score=95.87 Aligned_cols=97 Identities=16% Similarity=0.235 Sum_probs=65.3
Q ss_pred CCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 017747 136 GSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVV 215 (366)
Q Consensus 136 gSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~ 215 (366)
+++.+-.+|++++|+++|+.+|||+++ | ..+|+.-.+-|+|
T Consensus 80 ~d~~~l~~~~~~fD~I~~~~~l~h~~d-~--------------------------------------~~~l~~~~~~L~p 120 (208)
T d1vlma_ 80 GTAENLPLKDESFDFALMVTTICFVDD-P--------------------------------------ERALKEAYRILKK 120 (208)
T ss_dssp CBTTBCCSCTTCEEEEEEESCGGGSSC-H--------------------------------------HHHHHHHHHHEEE
T ss_pred ccccccccccccccccccccccccccc-c--------------------------------------ccchhhhhhcCCC
Confidence 455445589999999999999999854 2 1346667889999
Q ss_pred CceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEeeEEE
Q 017747 216 GGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLDM 293 (366)
Q Consensus 216 GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~~~e~ 293 (366)
||+|++..+...+ .+ ...+.. . .....+..-.+++|.+|+.+++++.| |++.++..
T Consensus 121 gG~l~i~~~~~~~----------~~---~~~~~~----~----~~~~~~~~~~~~~s~~~l~~~l~~~G-f~~i~v~~ 176 (208)
T d1vlma_ 121 GGYLIVGIVDRES----------FL---GREYEK----N----KEKSVFYKNARFFSTEELMDLMRKAG-FEEFKVVQ 176 (208)
T ss_dssp EEEEEEEEECSSS----------HH---HHHHHH----T----TTC-CCSTTCCCCCHHHHHHHHHHTT-CEEEEEEE
T ss_pred CceEEEEecCCcc----------hh---HHhhhh----c----cccccccccccCCCHHHHHHHHHHcC-CeEEEEEE
Confidence 9999999876543 11 111111 1 01112233345789999999999999 98765543
|
| >d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: Putative sarcosine dimethylglycine methyltransferase species: Red algae (Galdieria sulphuraria) [TaxId: 130081]
Probab=99.13 E-value=9.5e-10 Score=101.25 Aligned_cols=151 Identities=15% Similarity=0.033 Sum_probs=93.3
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
++..+|||+|||+|..+.. +.+++ ..+|+.-|+..+.-...-+.. ...|. ..+
T Consensus 66 ~~~~~vLDiGcG~G~~~~~--------la~~~---------~~~v~gvD~s~~~i~~a~~~~--------~~~gl--~~~ 118 (282)
T d2o57a1 66 QRQAKGLDLGAGYGGAARF--------LVRKF---------GVSIDCLNIAPVQNKRNEEYN--------NQAGL--ADN 118 (282)
T ss_dssp CTTCEEEEETCTTSHHHHH--------HHHHH---------CCEEEEEESCHHHHHHHHHHH--------HHHTC--TTT
T ss_pred CCCCEEEEeCCCCcHHHhh--------hhccC---------CcEEEEEeccchhhhhhhccc--------ccccc--ccc
Confidence 4568999999999998764 32321 267888998654322211111 11121 123
Q ss_pred e-EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 129 ~-f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
+ |.. +++.+-.+|++++|+++|..++||+.+. ..+|+
T Consensus 119 v~~~~---~d~~~l~~~~~sfD~V~~~~~l~h~~d~---------------------------------------~~~l~ 156 (282)
T d2o57a1 119 ITVKY---GSFLEIPCEDNSYDFIWSQDAFLHSPDK---------------------------------------LKVFQ 156 (282)
T ss_dssp EEEEE---CCTTSCSSCTTCEEEEEEESCGGGCSCH---------------------------------------HHHHH
T ss_pred ccccc---cccccccccccccchhhccchhhhccCH---------------------------------------HHHHH
Confidence 3 444 5776656899999999999999996431 23466
Q ss_pred HHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceE
Q 017747 208 SRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFK 287 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~ 287 (366)
.-.+-|+|||+|++.-........ ... +...+... ..| ..++.+++.+.+++.| |+
T Consensus 157 ~~~~~LkpgG~l~~~~~~~~~~~~----~~~----~~~~~~~~--------------~~~-~~~s~~~~~~~l~~~G-f~ 212 (282)
T d2o57a1 157 ECARVLKPRGVMAITDPMKEDGID----KSS----IQPILDRI--------------KLH-DMGSLGLYRSLAKECG-LV 212 (282)
T ss_dssp HHHHHEEEEEEEEEEEEEECTTCC----GGG----GHHHHHHH--------------TCS-SCCCHHHHHHHHHHTT-EE
T ss_pred HHHHhcCCCcEEEEEEeecCCCCc----hhH----HHHHHHHh--------------ccC-CCCCHHHHHHHHHHcC-Cc
Confidence 778999999999998654443211 111 11112211 122 3468899999999999 87
Q ss_pred EeeEE
Q 017747 288 LDQLD 292 (366)
Q Consensus 288 i~~~e 292 (366)
....+
T Consensus 213 ~i~~~ 217 (282)
T d2o57a1 213 TLRTF 217 (282)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 64443
|
| >d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: AD-003 protein-like domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810) species: Leishmania major [TaxId: 5664]
Probab=99.10 E-value=2.1e-10 Score=104.94 Aligned_cols=144 Identities=17% Similarity=0.185 Sum_probs=93.3
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
.+..+|+|+|||+|..|..++. +. . -+|...|........+-+.+. . .+.
T Consensus 92 ~~~~~vLD~GcG~G~~t~~ll~-------~~---------~-~~v~~vD~s~~~l~~a~~~~~-----------~--~~~ 141 (254)
T d1xtpa_ 92 HGTSRALDCGAGIGRITKNLLT-------KL---------Y-ATTDLLEPVKHMLEEAKRELA-----------G--MPV 141 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHH-------HH---------C-SEEEEEESCHHHHHHHHHHTT-----------T--SSE
T ss_pred CCCCeEEEecccCChhhHHHHh-------hc---------C-ceEEEEcCCHHHHHhhhcccc-----------c--ccc
Confidence 3568999999999999874322 21 1 357788876543222222111 1 222
Q ss_pred e-EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 129 ~-f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
+ |.+ +++.+--++++++|+++|..++||+++ .|+..||+
T Consensus 142 ~~~~~---~d~~~~~~~~~~fD~I~~~~vl~hl~d-------------------------------------~d~~~~l~ 181 (254)
T d1xtpa_ 142 GKFIL---ASMETATLPPNTYDLIVIQWTAIYLTD-------------------------------------ADFVKFFK 181 (254)
T ss_dssp EEEEE---SCGGGCCCCSSCEEEEEEESCGGGSCH-------------------------------------HHHHHHHH
T ss_pred ceeEE---ccccccccCCCccceEEeeccccccch-------------------------------------hhhHHHHH
Confidence 2 333 355444478899999999999999743 35677889
Q ss_pred HHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceE
Q 017747 208 SRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFK 287 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~ 287 (366)
..++-|+|||++++.-....... .+ .+. .-+.+.+|.++++++++++| |+
T Consensus 182 ~~~~~LkpgG~iii~e~~~~~~~-------~~---------------------~d~-~d~~~~rs~~~~~~l~~~aG-f~ 231 (254)
T d1xtpa_ 182 HCQQALTPNGYIFFKENCSTGDR-------FL---------------------VDK-EDSSLTRSDIHYKRLFNESG-VR 231 (254)
T ss_dssp HHHHHEEEEEEEEEEEEBC--CC-------EE---------------------EET-TTTEEEBCHHHHHHHHHHHT-CC
T ss_pred HHHHhcCCCcEEEEEecCCCCCc-------ce---------------------ecc-cCCceeCCHHHHHHHHHHcC-CE
Confidence 99999999999998754332110 00 011 12345679999999999999 88
Q ss_pred EeeEE
Q 017747 288 LDQLD 292 (366)
Q Consensus 288 i~~~e 292 (366)
+.+.+
T Consensus 232 ii~~~ 236 (254)
T d1xtpa_ 232 VVKEA 236 (254)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 86544
|
| >d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: Methoxy mycolic acid synthase 4, Mma4 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.09 E-value=2.1e-09 Score=99.65 Aligned_cols=162 Identities=15% Similarity=0.165 Sum_probs=98.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|||+|||.|..+.. +.++ .+ .+|+..|+..+.....-+.. .+.+. ...+
T Consensus 52 ~g~~VLDiGCG~G~~a~~--------~a~~--------~g-~~v~gi~ls~~q~~~a~~~~--------~~~~l--~~~~ 104 (280)
T d2fk8a1 52 PGMTLLDIGCGWGTTMRR--------AVER--------FD-VNVIGLTLSKNQHARCEQVL--------ASIDT--NRSR 104 (280)
T ss_dssp TTCEEEEESCTTSHHHHH--------HHHH--------HC-CEEEEEESCHHHHHHHHHHH--------HTSCC--SSCE
T ss_pred CCCEEEEecCCchHHHHH--------HHHh--------Cc-eeEEEecchHHHHHHHHHHH--------Hhhcc--ccch
Confidence 358999999999998764 2222 12 68899998765433221111 11121 1122
Q ss_pred -EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
+... ++ ..+++++|.++|..+++.+.. +++..||+.
T Consensus 105 ~~~~~---d~---~~~~~~fD~i~si~~~eh~~~-------------------------------------~~~~~~f~~ 141 (280)
T d2fk8a1 105 QVLLQ---GW---EDFAEPVDRIVSIEAFEHFGH-------------------------------------ENYDDFFKR 141 (280)
T ss_dssp EEEES---CG---GGCCCCCSEEEEESCGGGTCG-------------------------------------GGHHHHHHH
T ss_pred hhhhh---hh---hhhccchhhhhHhhHHHHhhh-------------------------------------hhHHHHHHH
Confidence 2222 22 134679999999999987532 346678899
Q ss_pred HHHHhccCceEEEEeecCCCCCC-CCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccc-cCCCHHHHHHHHhhcCce
Q 017747 209 RSEELVVGGRMVLILLGRIGPDH-VDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHF-YAPSKEEIEGEVGREGSF 286 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~-~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~-y~ps~eEv~~~i~~~gsf 286 (366)
-++-|||||++++...+..+... .......-++ ..-+.+. +..+..|- +.||.+|+..++++.| |
T Consensus 142 i~~~LkpgG~~~i~~i~~~~~~~~~~~~~~~~~~--~~~~~df----------I~kyifPgg~lPS~~~l~~~~e~aG-f 208 (280)
T d2fk8a1 142 CFNIMPADGRMTVQSSVSYHPYEMAARGKKLSFE--TARFIKF----------IVTEIFPGGRLPSTEMMVEHGEKAG-F 208 (280)
T ss_dssp HHHHSCTTCEEEEEEEECCCHHHHHTTCHHHHHH--HHHHHHH----------HHHHTSTTCCCCCHHHHHHHHHHTT-C
T ss_pred HHhccCCCceEEEEEeeccCcchhhhcccccccc--cccccch----------hhhhccCCCcccchHhhhhhHHhhc-c
Confidence 99999999999998876644210 0000000011 1111111 22345665 6799999999999998 8
Q ss_pred EEeeEEEE
Q 017747 287 KLDQLDMF 294 (366)
Q Consensus 287 ~i~~~e~~ 294 (366)
++.+.+.+
T Consensus 209 ~v~~~~~~ 216 (280)
T d2fk8a1 209 TVPEPLSL 216 (280)
T ss_dssp BCCCCEEC
T ss_pred ccceeeec
Confidence 88665544
|
| >d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Plant O-methyltransferase, C-terminal domain domain: Carminomycin 4-O-methyltransferase species: Streptomyces peucetius [TaxId: 1950]
Probab=99.06 E-value=9.8e-10 Score=99.91 Aligned_cols=164 Identities=19% Similarity=0.239 Sum_probs=99.2
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
....+|+|+|||+|..++. +.++ .|.++++.-|+|. .....-+. ... .+. ..+
T Consensus 79 ~~~~~VLDvGcG~G~~~~~--------la~~--------~p~~~~~~~D~~~-~~~~a~~~-------~~~-~~~--~~r 131 (253)
T d1tw3a2 79 TNVRHVLDVGGGKGGFAAA--------IARR--------APHVSATVLEMAG-TVDTARSY-------LKD-EGL--SDR 131 (253)
T ss_dssp TTCSEEEEETCTTSHHHHH--------HHHH--------CTTCEEEEEECTT-HHHHHHHH-------HHH-TTC--TTT
T ss_pred ccCCEEEEeCCCCCHHHHH--------HHHh--------cceeEEEEccCHH-HHHHHHHH-------HHH-hhc--ccc
Confidence 4457999999999999875 3333 3568899999974 22211111 111 111 123
Q ss_pred eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
+ ..++++|++. .| .+.|++++++.||.+++ ++...+|+.
T Consensus 132 v--~~~~~D~~~~-~~-~~~D~v~~~~vlh~~~d-------------------------------------~~~~~~L~~ 170 (253)
T d1tw3a2 132 V--DVVEGDFFEP-LP-RKADAIILSFVLLNWPD-------------------------------------HDAVRILTR 170 (253)
T ss_dssp E--EEEECCTTSC-CS-SCEEEEEEESCGGGSCH-------------------------------------HHHHHHHHH
T ss_pred h--hhccccchhh-cc-cchhheeeccccccCCc-------------------------------------hhhHHHHHH
Confidence 3 2344788763 33 46899999999997432 233456788
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEE
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKL 288 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i 288 (366)
-++-|+|||++++.-......... ......+. +.-|+.-| -..+|.+|+++++++.| |++
T Consensus 171 ~~~~LkPGG~l~i~e~~~~~~~~~----~~~~~~~d--l~~~~~~~-------------g~~rt~~e~~~ll~~AG-f~~ 230 (253)
T d1tw3a2 171 CAEALEPGGRILIHERDDLHENSF----NEQFTELD--LRMLVFLG-------------GALRTREKWDGLAASAG-LVV 230 (253)
T ss_dssp HHHTEEEEEEEEEEECCBCGGGCC----SHHHHHHH--HHHHHHHS-------------CCCCBHHHHHHHHHHTT-EEE
T ss_pred HHHhcCCCcEEEEEeccCCCCCcc----hhHHHHhh--HHHHhhCC-------------CcCCCHHHHHHHHHHCC-CeE
Confidence 899999999999874433222111 11111111 11122111 13479999999999999 999
Q ss_pred eeEEEEeeccCC
Q 017747 289 DQLDMFQVERQG 300 (366)
Q Consensus 289 ~~~e~~~~~~~~ 300 (366)
.++..+..+..+
T Consensus 231 ~~v~~~~~p~~~ 242 (253)
T d1tw3a2 231 EEVRQLPSPTIP 242 (253)
T ss_dssp EEEEEEECSSSS
T ss_pred EEEEECCCCCCC
Confidence 888777655433
|
| >d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: AD-003 protein-like domain: Adrenal gland protein AD-003 (C9orf32) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.02 E-value=5e-10 Score=99.60 Aligned_cols=146 Identities=15% Similarity=0.053 Sum_probs=97.4
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
....+|+|+|||+|.++..+ .. ..+ -+|+..|+..+.-...-+.+... + ..+
T Consensus 59 ~~~~~vLDiGcG~G~~~~~l--------~~--------~~~-~~v~~vD~s~~~l~~ak~~~~~~--------~---~~~ 110 (222)
T d2ex4a1 59 TGTSCALDCGAGIGRITKRL--------LL--------PLF-REVDMVDITEDFLVQAKTYLGEE--------G---KRV 110 (222)
T ss_dssp CCCSEEEEETCTTTHHHHHT--------TT--------TTC-SEEEEEESCHHHHHHHHHHTGGG--------G---GGE
T ss_pred CCCCEEEEeccCCCHhhHHH--------HH--------hcC-CEEEEeecCHHHhhccccccccc--------c---ccc
Confidence 34579999999999998642 11 122 47888999876544443333210 0 112
Q ss_pred -eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 129 -VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 129 -~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
-|.+ +++.+-.++++++|++++..++|+++. .|+..+|+
T Consensus 111 ~~f~~---~d~~~~~~~~~~fD~I~~~~~l~h~~~-------------------------------------~~~~~~l~ 150 (222)
T d2ex4a1 111 RNYFC---CGLQDFTPEPDSYDVIWIQWVIGHLTD-------------------------------------QHLAEFLR 150 (222)
T ss_dssp EEEEE---CCGGGCCCCSSCEEEEEEESCGGGSCH-------------------------------------HHHHHHHH
T ss_pred ccccc---ccccccccccccccccccccccccchh-------------------------------------hhhhhHHH
Confidence 2444 477776688999999999999999743 23455677
Q ss_pred HHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceE
Q 017747 208 SRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFK 287 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~ 287 (366)
.-++-|+|||.+++......+... ++ ..-..+.++.++++++++++| |+
T Consensus 151 ~i~~~Lk~~G~~~i~~~~~~~~~~-----------------------------~~-~~~~~~~~~~~~~~~l~~~aG-f~ 199 (222)
T d2ex4a1 151 RCKGSLRPNGIIVIKDNMAQEGVI-----------------------------LD-DVDSSVCRDLDVVRRIICSAG-LS 199 (222)
T ss_dssp HHHHHEEEEEEEEEEEEEBSSSEE-----------------------------EE-TTTTEEEEBHHHHHHHHHHTT-CC
T ss_pred HHHHhcCCcceEEEEEcccccccc-----------------------------cc-cCCceeeCCHHHHHHHHHHcC-CE
Confidence 889999999999998543322100 00 112335678999999999999 88
Q ss_pred EeeEEE
Q 017747 288 LDQLDM 293 (366)
Q Consensus 288 i~~~e~ 293 (366)
+.+.+.
T Consensus 200 ii~~~~ 205 (222)
T d2ex4a1 200 LLAEER 205 (222)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 866553
|
| >d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine N-methyltransferase, PNMTase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arylamine N-methyltransferase domain: Phenylethanolamine N-methyltransferase, PNMTase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.00 E-value=6.6e-10 Score=101.83 Aligned_cols=97 Identities=18% Similarity=0.113 Sum_probs=72.7
Q ss_pred CCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 017747 136 GSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVV 215 (366)
Q Consensus 136 gSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~ 215 (366)
+.+...-++++++|++.+++++||++.- ..|+..+|+.-++-|||
T Consensus 146 ~~~~~~~~~~~~fD~V~~~~~l~~i~~~-----------------------------------~~~~~~~l~~~~~~LkP 190 (263)
T d2g72a1 146 QPLGAGSPAPLPADALVSAFCLEAVSPD-----------------------------------LASFQRALDHITTLLRP 190 (263)
T ss_dssp STTCSSCSSCSSEEEEEEESCHHHHCSS-----------------------------------HHHHHHHHHHHHTTEEE
T ss_pred CccccCCcCcCccCeeeeHHHHHHHccC-----------------------------------HHHHHHHHHHHHHHcCC
Confidence 3444445677899999999999997542 13567788999999999
Q ss_pred CceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEeeEEEEe
Q 017747 216 GGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLDMFQ 295 (366)
Q Consensus 216 GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~~~e~~~ 295 (366)
||.|++....+.+. + ....-..+.|..+.+|++++++++| |++.+++...
T Consensus 191 GG~li~~~~~~~~~--------~---------------------~~~~~~~~~~~~t~e~v~~~l~~aG-f~v~~~~~~~ 240 (263)
T d2g72a1 191 GGHLLLIGALEESW--------Y---------------------LAGEARLTVVPVSEEEVREALVRSG-YKVRDLRTYI 240 (263)
T ss_dssp EEEEEEEEEESCCE--------E---------------------EETTEEEECCCCCHHHHHHHHHHTT-EEEEEEEEEE
T ss_pred CCEEEEecccCCcc--------c---------------------ccCCcccccCCCCHHHHHHHHHHCC-CeEEEEEEee
Confidence 99999987654321 0 0112235678889999999999999 9998888765
Q ss_pred ec
Q 017747 296 VE 297 (366)
Q Consensus 296 ~~ 297 (366)
.+
T Consensus 241 ~~ 242 (263)
T d2g72a1 241 MP 242 (263)
T ss_dssp CC
T ss_pred cc
Confidence 44
|
| >d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical Protein YjhP domain: Hypothetical Protein YjhP species: Escherichia coli [TaxId: 562]
Probab=98.99 E-value=3.2e-09 Score=95.53 Aligned_cols=150 Identities=12% Similarity=0.008 Sum_probs=94.6
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceE
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVY 130 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 130 (366)
..+|+|+|||+|..+.. +.++ .+ .+|+.-|+........-+.. ...|.. ..--|
T Consensus 34 g~~VLDiGCG~G~~~~~--------la~~--------~~-~~v~GvD~s~~~~~~ar~~~--------~~~gl~-~~v~~ 87 (245)
T d1nkva_ 34 GTRILDLGSGSGEMLCT--------WARD--------HG-ITGTGIDMSSLFTAQAKRRA--------EELGVS-ERVHF 87 (245)
T ss_dssp TCEEEEETCTTCHHHHH--------HHHH--------TC-CEEEEEESCHHHHHHHHHHH--------HHTTCT-TTEEE
T ss_pred CCEEEEEcCCCCHHHHH--------HHHh--------cC-CEEEEEecccchhhHHHHHH--------HHhhcc-ccchh
Confidence 47999999999988763 3232 22 68899998764332221111 111211 11235
Q ss_pred EeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 017747 131 IAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRS 210 (366)
Q Consensus 131 ~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra 210 (366)
.. +++ ..++|++++|+++|..++||+.+.+ .+|+.-.
T Consensus 88 ~~---~d~-~~~~~~~~fD~v~~~~~~~~~~d~~---------------------------------------~~l~~~~ 124 (245)
T d1nkva_ 88 IH---NDA-AGYVANEKCDVAACVGATWIAGGFA---------------------------------------GAEELLA 124 (245)
T ss_dssp EE---SCC-TTCCCSSCEEEEEEESCGGGTSSSH---------------------------------------HHHHHHT
T ss_pred hh---hHH-hhccccCceeEEEEEehhhccCCHH---------------------------------------HHHHHHH
Confidence 54 466 4468999999999999999986532 2356668
Q ss_pred HHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEee
Q 017747 211 EELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQ 290 (366)
Q Consensus 211 ~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~~ 290 (366)
+-|+|||++++...+...... .+.+...|. ...+..+.+..++...+++.| |++..
T Consensus 125 r~LkPGG~l~i~~~~~~~~~~--------~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~aG-~~~v~ 180 (245)
T d1nkva_ 125 QSLKPGGIMLIGEPYWRQLPA--------TEEIAQACG---------------VSSTSDFLTLPGLVGAFDDLG-YDVVE 180 (245)
T ss_dssp TSEEEEEEEEEEEEEETTCCS--------SHHHHHTTT---------------CSCGGGSCCHHHHHHHHHTTT-BCCCE
T ss_pred HHcCcCcEEEEEeccccCCCC--------hHHHHHHhc---------------cCCCcccCCHHHHHHHHHHcC-CEEEE
Confidence 999999999999876654311 011222211 112223568899999999999 88765
Q ss_pred EEE
Q 017747 291 LDM 293 (366)
Q Consensus 291 ~e~ 293 (366)
...
T Consensus 181 ~~~ 183 (245)
T d1nkva_ 181 MVL 183 (245)
T ss_dssp EEE
T ss_pred EEe
Confidence 543
|
| >d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: rRNA methyltransferase RlmA domain: rRNA methyltransferase RlmA species: Escherichia coli [TaxId: 562]
Probab=98.94 E-value=6.2e-10 Score=102.37 Aligned_cols=101 Identities=19% Similarity=0.217 Sum_probs=69.6
Q ss_pred CCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCC
Q 017747 48 DPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSP 127 (366)
Q Consensus 48 ~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~ 127 (366)
..++.+|+|+|||+|..+.. +.+. .|..+++..|+....-....+.. .+
T Consensus 82 ~~~~~~iLDiGcG~G~~~~~--------l~~~--------~~~~~~~giD~s~~~~~~a~~~~---------------~~ 130 (268)
T d1p91a_ 82 DDKATAVLDIGCGEGYYTHA--------FADA--------LPEITTFGLDVSKVAIKAAAKRY---------------PQ 130 (268)
T ss_dssp CTTCCEEEEETCTTSTTHHH--------HHHT--------CTTSEEEEEESCHHHHHHHHHHC---------------TT
T ss_pred CCCCCEEEEeCCCCcHHHHH--------HHHH--------CCCCEEEEecchHhhhhhhhccc---------------cc
Confidence 45678999999999999864 3332 35588999998654222211111 12
Q ss_pred ceEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 128 SVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 128 ~~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
-.|.. ++...-.|+++++|++++..++|++.+ +
T Consensus 131 ~~~~~---~d~~~l~~~~~sfD~v~~~~~~~~~~e---------------------------~----------------- 163 (268)
T d1p91a_ 131 VTFCV---ASSHRLPFSDTSMDAIIRIYAPCKAEE---------------------------L----------------- 163 (268)
T ss_dssp SEEEE---CCTTSCSBCTTCEEEEEEESCCCCHHH---------------------------H-----------------
T ss_pred cccee---eehhhccCCCCCEEEEeecCCHHHHHH---------------------------H-----------------
Confidence 23444 466666689999999999887766321 1
Q ss_pred HHHHHhccCceEEEEeecCCC
Q 017747 208 SRSEELVVGGRMVLILLGRIG 228 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~g~~~ 228 (366)
.+-|||||+|+++.++.+.
T Consensus 164 --~rvLkpgG~l~~~~p~~~~ 182 (268)
T d1p91a_ 164 --ARVVKPGGWVITATPGPRH 182 (268)
T ss_dssp --HHHEEEEEEEEEEEECTTT
T ss_pred --HHHhCCCcEEEEEeeCCcc
Confidence 5779999999999987654
|
| >d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: CmaA2 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.94 E-value=1e-08 Score=95.61 Aligned_cols=166 Identities=12% Similarity=0.093 Sum_probs=99.2
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
..-.+|||+|||.|..++. +.+++ + .+|...|+..+...-.-+ .....+.. ...
T Consensus 60 ~~G~~VLDiGCG~G~~~~~--------~a~~~--------g-~~v~git~s~~q~~~a~~--------~~~~~~l~-~~v 113 (291)
T d1kpia_ 60 EPGMTLLDIGCGWGSTMRH--------AVAEY--------D-VNVIGLTLSENQYAHDKA--------MFDEVDSP-RRK 113 (291)
T ss_dssp CTTCEEEEETCTTSHHHHH--------HHHHH--------C-CEEEEEESCHHHHHHHHH--------HHHHSCCS-SCE
T ss_pred CCCCEEEEecCcchHHHHH--------HHHhc--------C-cceeeccchHHHHHHHHH--------HHHhhccc-hhh
Confidence 3458999999999998764 22221 2 678888887543221111 01111221 111
Q ss_pred eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
.+... ++ .++++++|.++|--++..+.+..... . .+.+.+|++.
T Consensus 114 ~~~~~---d~---~~~~~~fD~i~sie~~eH~~~~~~~~-~-----------------------------~~~~~~~f~~ 157 (291)
T d1kpia_ 114 EVRIQ---GW---EEFDEPVDRIVSLGAFEHFADGAGDA-G-----------------------------FERYDTFFKK 157 (291)
T ss_dssp EEEEC---CG---GGCCCCCSEEEEESCGGGTTCCSSCC-S-----------------------------TTHHHHHHHH
T ss_pred hhhhh---cc---cccccccceEeechhHHhcchhhhhh-H-----------------------------HHHHHHHHHH
Confidence 22222 22 36789999999999996654322110 0 2457788999
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHHHH------HHHHHHHHHHcCccchhhhcccCccc-cCCCHHHHHHHHh
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFWEL------LSRSLAILVSQGEIEKEKLVAYHAHF-YAPSKEEIEGEVG 281 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~------l~~al~~mv~eG~i~~e~~d~f~~P~-y~ps~eEv~~~i~ 281 (366)
.++-|+|||+|++..++..+.. +..+. -.....+.. .....|- +.||.+|+...++
T Consensus 158 i~~~LkpgG~~~l~~i~~~~~~-------~~~~~~~~~p~~~~~~~~fi----------~kyiFpgg~lps~~~~~~~~e 220 (291)
T d1kpia_ 158 FYNLTPDDGRMLLHTITIPDKE-------EAQELGLTSPMSLLRFIKFI----------LTEIFPGGRLPRISQVDYYSS 220 (291)
T ss_dssp HHHTSCTTCEEEEEEEECCCHH-------HHHHHTCCCCHHHHHHHHHH----------HHHTCTTCCCCCHHHHHHHHH
T ss_pred HHHhCCCCCceEEEEEeccCcc-------hhhhccCCCchhhcccchHH----------HHHhcCCCCCCCHHHHHhhhc
Confidence 9999999999999998876521 00000 000111111 1223453 6789999999999
Q ss_pred hcCceEEeeEEEE
Q 017747 282 REGSFKLDQLDMF 294 (366)
Q Consensus 282 ~~gsf~i~~~e~~ 294 (366)
+.| |+|++.+.+
T Consensus 221 ~~g-l~v~~~~~~ 232 (291)
T d1kpia_ 221 NAG-WKVERYHRI 232 (291)
T ss_dssp HHT-CEEEEEEEC
T ss_pred ccc-cccceeeec
Confidence 998 998666554
|
| >d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Pseudomonas syringae [TaxId: 317]
Probab=98.92 E-value=7.5e-10 Score=94.81 Aligned_cols=160 Identities=8% Similarity=0.023 Sum_probs=97.3
Q ss_pred HHHHHHHhhhhcCCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHH
Q 017747 36 TLEALQQLYLEIDPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHR 115 (366)
Q Consensus 36 l~~ai~~l~~~~~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~ 115 (366)
|++.+..+. .++..+|||+|||+|+++.. +.++ | .+|+..|+..+.-....+.......
T Consensus 9 ~~~~~~~l~---~~~~~rvLd~GCG~G~~a~~--------la~~-----G-----~~V~gvD~S~~~i~~a~~~~~~~~~ 67 (201)
T d1pjza_ 9 LQQYWSSLN---VVPGARVLVPLCGKSQDMSW--------LSGQ-----G-----YHVVGAELSEAAVERYFTERGEQPH 67 (201)
T ss_dssp HHHHHHHHC---CCTTCEEEETTTCCSHHHHH--------HHHH-----C-----CEEEEEEECHHHHHHHHHHHCSCSE
T ss_pred HHHHHHHcC---CCCCCEEEEecCcCCHHHHH--------HHHc-----C-----CceEeecccHHHHHHHHHHhccccc
Confidence 444444432 34568999999999999975 3332 2 8899999987765555443321100
Q ss_pred HHhhhcCC----CCCCceEEeccCCCccccc-CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHH
Q 017747 116 QLRNERGG----GSSPSVYIAGYPGSFYGRL-FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAV 190 (366)
Q Consensus 116 ~~~~~~~~----~~~~~~f~~~vpgSFy~~l-fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v 190 (366)
.. ..+. ......|.. +++.+-- .+..++|+++++.++|+++.
T Consensus 68 ~~--~~~~~~~~~~~~~~~~~---~d~~~l~~~~~~~~D~i~~~~~l~~l~~---------------------------- 114 (201)
T d1pjza_ 68 IT--SQGDFKVYAAPGIEIWC---GDFFALTARDIGHCAAFYDRAAMIALPA---------------------------- 114 (201)
T ss_dssp EE--EETTEEEEECSSSEEEE---ECCSSSTHHHHHSEEEEEEESCGGGSCH----------------------------
T ss_pred hh--hhhhhhhccccccceec---ccccccccccccceeEEEEEeeeEecch----------------------------
Confidence 00 0000 001112222 2443322 34568999999999999643
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccC
Q 017747 191 SKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYA 270 (366)
Q Consensus 191 ~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ 270 (366)
.++..+++.-++-|+|||++++......... ...|.|.
T Consensus 115 ---------~~~~~~~~~i~~~LkpgG~l~l~~~~~~~~~---------------------------------~~~p~~~ 152 (201)
T d1pjza_ 115 ---------DMRERYVQHLEALMPQACSGLLITLEYDQAL---------------------------------LEGPPFS 152 (201)
T ss_dssp ---------HHHHHHHHHHHHHSCSEEEEEEEEESSCSSS---------------------------------SSSCCCC
T ss_pred ---------hhhHHHHHHHHHhcCCCcEEEEEEccccccc---------------------------------CCCcccc
Confidence 2445567788999999999998876654321 1235667
Q ss_pred CCHHHHHHHHhhcCceEEeeEEE
Q 017747 271 PSKEEIEGEVGREGSFKLDQLDM 293 (366)
Q Consensus 271 ps~eEv~~~i~~~gsf~i~~~e~ 293 (366)
.+.+|+++++. .+ |.+..++.
T Consensus 153 ~~~~el~~l~~-~~-~~i~~~~~ 173 (201)
T d1pjza_ 153 VPQTWLHRVMS-GN-WEVTKVGG 173 (201)
T ss_dssp CCHHHHHHTSC-SS-EEEEEEEE
T ss_pred CCHHHHHHHhC-CC-cEEEEEEE
Confidence 78888888775 44 77755554
|
| >d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein ECA1738 species: Erwinia carotovora [TaxId: 554]
Probab=98.91 E-value=1e-09 Score=97.77 Aligned_cols=153 Identities=16% Similarity=0.183 Sum_probs=89.5
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
++-+|+|+|||+|..+.. +.++ -.+|+..|+..+.-+ ..++... .+--
T Consensus 20 ~~~~VLDiGcG~G~~~~~--------l~~~----------g~~v~giD~s~~~i~-----------~a~~~~~---~~~~ 67 (225)
T d2p7ia1 20 RPGNLLELGSFKGDFTSR--------LQEH----------FNDITCVEASEEAIS-----------HAQGRLK---DGIT 67 (225)
T ss_dssp CSSCEEEESCTTSHHHHH--------HTTT----------CSCEEEEESCHHHHH-----------HHHHHSC---SCEE
T ss_pred CCCcEEEEeCCCcHHHHH--------HHHc----------CCeEEEEeCcHHHhh-----------hhhcccc---cccc
Confidence 356899999999999864 2111 146888897543211 1111111 1223
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH-H
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR-S 208 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~-~ 208 (366)
|+. +++ +.+.+++++|++++...|||+++ |.. +|+ .
T Consensus 68 ~~~---~~~-~~~~~~~~fD~I~~~~vleh~~d-~~~--------------------------------------~l~~i 104 (225)
T d2p7ia1 68 YIH---SRF-EDAQLPRRYDNIVLTHVLEHIDD-PVA--------------------------------------LLKRI 104 (225)
T ss_dssp EEE---SCG-GGCCCSSCEEEEEEESCGGGCSS-HHH--------------------------------------HHHHH
T ss_pred ccc---ccc-cccccccccccccccceeEecCC-HHH--------------------------------------HHHHH
Confidence 444 355 44556789999999999999865 211 122 2
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhh----hcccCccccCCCHHHHHHHHhhcC
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEK----LVAYHAHFYAPSKEEIEGEVGREG 284 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~----~d~f~~P~y~ps~eEv~~~i~~~g 284 (366)
+.+-|+|||.++++++-... ++..+ ..+ .|.+.... .+-..--....+.++++..+++.|
T Consensus 105 ~~~~Lk~gG~l~i~~pn~~~----------~~~~~-~~~-----~~~~~~~~~~~~~~~~~~h~~~~~~~~l~~~l~~~G 168 (225)
T d2p7ia1 105 NDDWLAEGGRLFLVCPNANA----------VSRQI-AVK-----MGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAG 168 (225)
T ss_dssp HHTTEEEEEEEEEEEECTTC----------HHHHH-HHH-----TTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTT
T ss_pred HHHhcCCCceEEEEeCCccc----------HHHHH-HHH-----hhhhhhhhhcCccccceeeeeccCHHHHHHHHHHCC
Confidence 34679999999999864432 22211 111 12221111 010111122448999999999999
Q ss_pred ceEEeeEEEE
Q 017747 285 SFKLDQLDMF 294 (366)
Q Consensus 285 sf~i~~~e~~ 294 (366)
|+|.+.+.+
T Consensus 169 -f~i~~~~~~ 177 (225)
T d2p7ia1 169 -LQVTYRSGI 177 (225)
T ss_dssp -CEEEEEEEE
T ss_pred -CEEEEEEEE
Confidence 999887754
|
| >d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Plant O-methyltransferase, C-terminal domain domain: Aclacinomycin-10-hydroxylase RdmB species: Streptomyces purpurascens [TaxId: 1924]
Probab=98.83 E-value=9.6e-09 Score=93.67 Aligned_cols=159 Identities=21% Similarity=0.263 Sum_probs=93.3
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+..-+|+|+|||+|..+.. +.++ .|.++++.-|+|.. -... .... ...+. ...
T Consensus 80 ~~~~~vlDvG~G~G~~~~~--------l~~~--------~P~~~~~~~Dlp~~--~~~a------~~~~-~~~~~--~~r 132 (256)
T d1qzza2 80 SAVRHVLDVGGGNGGMLAA--------IALR--------APHLRGTLVELAGP--AERA------RRRF-ADAGL--ADR 132 (256)
T ss_dssp TTCCEEEEETCTTSHHHHH--------HHHH--------CTTCEEEEEECHHH--HHHH------HHHH-HHTTC--TTT
T ss_pred ccCCEEEEECCCCCHHHHH--------HHHh--------hcCcEEEEecChHH--HHHH------HHHH-hhcCC--cce
Confidence 3456899999999998764 4443 45689999999741 1111 1111 11121 123
Q ss_pred eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
+. .++++|+.. .|. +.|+++..+.||-+++ ++...+|+.
T Consensus 133 i~--~~~~d~~~~-~p~-~~D~v~~~~vLh~~~d-------------------------------------~~~~~lL~~ 171 (256)
T d1qzza2 133 VT--VAEGDFFKP-LPV-TADVVLLSFVLLNWSD-------------------------------------EDALTILRG 171 (256)
T ss_dssp EE--EEECCTTSC-CSC-CEEEEEEESCGGGSCH-------------------------------------HHHHHHHHH
T ss_pred ee--eeeeecccc-ccc-cchhhhccccccccCc-------------------------------------HHHHHHHHH
Confidence 32 345788764 344 5899999999984321 244567888
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEE
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKL 288 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i 288 (366)
-++-|+|||++++.=.-..+.+.. ...+..+. .+.-|+.- .-..+|.+|++++++++| |++
T Consensus 172 i~~~LkpgG~llI~d~~~~~~~~~----~~~~~~~~-d~~ml~~~-------------~g~~rt~~e~~~ll~~AG-f~~ 232 (256)
T d1qzza2 172 CVRALEPGGRLLVLDRADVEGDGA----DRFFSTLL-DLRMLTFM-------------GGRVRTRDEVVDLAGSAG-LAL 232 (256)
T ss_dssp HHHHEEEEEEEEEEECCH-----------HHHHHHH-HHHHHHHH-------------SCCCCCHHHHHHHHHTTT-EEE
T ss_pred HHhhcCCcceeEEEEeccCCCCcc----cHHHHHHH-HHHHHhhC-------------CCccCCHHHHHHHHHHCC-Cce
Confidence 899999999999874322211110 11111111 11111111 123479999999999999 988
Q ss_pred eeEEEE
Q 017747 289 DQLDMF 294 (366)
Q Consensus 289 ~~~e~~ 294 (366)
.+....
T Consensus 233 ~~~~~~ 238 (256)
T d1qzza2 233 ASERTS 238 (256)
T ss_dssp EEEEEE
T ss_pred eEEEEe
Confidence 776654
|
| >d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical methyltransferase PH1305 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.80 E-value=6.1e-09 Score=93.19 Aligned_cols=107 Identities=16% Similarity=0.245 Sum_probs=72.1
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
.++-+|+|+|||+|..|.. +.++ | .+|+..|+..++-...-+..+ . .+ ...
T Consensus 40 ~~~~~iLDiGcGtG~~~~~--------l~~~-----~-----~~v~gvD~s~~mi~~a~~~~~-------~-~~---~~i 90 (251)
T d1wzna1 40 REVRRVLDLACGTGIPTLE--------LAER-----G-----YEVVGLDLHEEMLRVARRKAK-------E-RN---LKI 90 (251)
T ss_dssp SCCCEEEEETCTTCHHHHH--------HHHT-----T-----CEEEEEESCHHHHHHHHHHHH-------H-TT---CCC
T ss_pred CCCCEEEEeCCCCCccchh--------hccc-----c-----eEEEEEeeccccccccccccc-------c-cc---ccc
Confidence 3457899999999998864 2221 1 678999998754433322211 1 11 222
Q ss_pred eEEeccCCCcccccCCCCcccEEEcc-cccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSS-NSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~-~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
.|.. +++ +.+-+++++|+++|. .++||++. .|+..+|+
T Consensus 91 ~~~~---~d~-~~l~~~~~fD~I~~~~~~~~~~~~-------------------------------------~~~~~~L~ 129 (251)
T d1wzna1 91 EFLQ---GDV-LEIAFKNEFDAVTMFFSTIMYFDE-------------------------------------EDLRKLFS 129 (251)
T ss_dssp EEEE---SCG-GGCCCCSCEEEEEECSSGGGGSCH-------------------------------------HHHHHHHH
T ss_pred hhee---hhh-hhcccccccchHhhhhhhhhcCCh-------------------------------------HHHHHHHH
Confidence 3444 355 555556799999986 67888632 35677899
Q ss_pred HHHHHhccCceEEEEeec
Q 017747 208 SRSEELVVGGRMVLILLG 225 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~g 225 (366)
..++-|+|||++++.+..
T Consensus 130 ~~~~~LkpgG~lii~~~~ 147 (251)
T d1wzna1 130 KVAEALKPGGVFITDFPC 147 (251)
T ss_dssp HHHHHEEEEEEEEEEEEC
T ss_pred HHHHHcCCCcEEEEEecc
Confidence 999999999999998754
|
| >d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: CmaA1 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.79 E-value=1.9e-07 Score=86.47 Aligned_cols=162 Identities=17% Similarity=0.237 Sum_probs=92.9
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
.-.+|+|+|||.|..++.+ .+.+ | .+|..-++..+.....-+ ...+.|. ...+
T Consensus 62 ~G~~VLDiGCG~G~~a~~~--------a~~~----g-----~~v~git~s~~Q~~~a~~--------~~~~~g~--~~~v 114 (285)
T d1kpga_ 62 PGMTLLDVGCGWGATMMRA--------VEKY----D-----VNVVGLTLSKNQANHVQQ--------LVANSEN--LRSK 114 (285)
T ss_dssp TTCEEEEETCTTSHHHHHH--------HHHH----C-----CEEEEEESCHHHHHHHHH--------HHHTCCC--CSCE
T ss_pred CCCEEEEecCcchHHHHHH--------HhcC----C-----cceEEEeccHHHHHHHHH--------HHHhhhh--hhhh
Confidence 3489999999999988752 2221 1 677777776432221111 0111122 1222
Q ss_pred -EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
+.. ++| . ..++++|-++|-.++..+.. +++..|++.
T Consensus 115 ~~~~---~d~-~--~~~~~fD~i~si~~~eh~~~-------------------------------------~~~~~~~~~ 151 (285)
T d1kpga_ 115 RVLL---AGW-E--QFDEPVDRIVSIGAFEHFGH-------------------------------------ERYDAFFSL 151 (285)
T ss_dssp EEEE---SCG-G--GCCCCCSEEEEESCGGGTCT-------------------------------------TTHHHHHHH
T ss_pred HHHH---hhh-h--cccccccceeeehhhhhcCc-------------------------------------hhHHHHHHH
Confidence 333 344 2 23578999999988877532 234567889
Q ss_pred HHHHhccCceEEEEeecCCCCC-CCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCcc-ccCCCHHHHHHHHhhcCce
Q 017747 209 RSEELVVGGRMVLILLGRIGPD-HVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAH-FYAPSKEEIEGEVGREGSF 286 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~-~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P-~y~ps~eEv~~~i~~~gsf 286 (366)
..+-|+|||+|++..++..... ........-.+ ...... .. .....| -+.||.+++...+++.| |
T Consensus 152 ~~r~LkpgG~~~l~~i~~~~~~~~~~~~~~~~~~-~~~~~~-fi----------~kyiFpgg~lPsl~~~~~~~e~ag-f 218 (285)
T d1kpga_ 152 AHRLLPADGVMLLHTITGLHPKEIHERGLPMSFT-FARFLK-FI----------VTEIFPGGRLPSIPMVQECASANG-F 218 (285)
T ss_dssp HHHHSCTTCEEEEEEEEECCHHHHTTTTCSCHHH-HHHHHH-HH----------HHHTSTTCCCCCHHHHHHHHHTTT-C
T ss_pred HHhhcCCCCcEEEEEEeccCchhhccccCCcchh-hhchhh-HH----------HHHhccCCCCCChhhHHHHHHHhc-h
Confidence 9999999999999988754321 00000000011 111111 11 112233 25689999999999999 9
Q ss_pred EEeeEEEE
Q 017747 287 KLDQLDMF 294 (366)
Q Consensus 287 ~i~~~e~~ 294 (366)
+|.+.+.+
T Consensus 219 ~v~~~~~~ 226 (285)
T d1kpga_ 219 TVTRVQSL 226 (285)
T ss_dssp EEEEEEEC
T ss_pred hhcccccc
Confidence 98666544
|
| >d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.77 E-value=1.7e-08 Score=89.93 Aligned_cols=155 Identities=10% Similarity=0.012 Sum_probs=97.1
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHH--HHhhhcCC---
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHR--QLRNERGG--- 123 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~--~~~~~~~~--- 123 (366)
+...+|+|+|||+|.++.. +.+. | .+|+.-|+...--...++....... ........
T Consensus 44 ~~~~rvLd~GCG~G~~a~~--------LA~~-----G-----~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~ 105 (229)
T d2bzga1 44 KSGLRVFFPLCGKAVEMKW--------FADR-----G-----HSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVF 105 (229)
T ss_dssp CCSCEEEETTCTTCTHHHH--------HHHT-----T-----CEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEE
T ss_pred CCCCEEEEeCCCCcHHHHH--------HHhC-----C-----CcEEEEeCCHHHHHHHHHHhhccccccchhccccccee
Confidence 3567999999999999985 3231 2 7899999987654444443321100 00000000
Q ss_pred --CCCCceEEeccCCCcccc-cCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHH
Q 017747 124 --GSSPSVYIAGYPGSFYGR-LFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQE 200 (366)
Q Consensus 124 --~~~~~~f~~~vpgSFy~~-lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~ 200 (366)
.....-|.+ +++++. ..+.+++|++++..++|.+.. .
T Consensus 106 ~~~~~~v~~~~---~d~~~l~~~~~~~fd~i~~~~~l~~~~~---~---------------------------------- 145 (229)
T d2bzga1 106 KSSSGNISLYC---CSIFDLPRTNIGKFDMIWDRGALVAINP---G---------------------------------- 145 (229)
T ss_dssp EETTSSEEEEE---SCGGGGGGSCCCCEEEEEESSSTTTSCG---G----------------------------------
T ss_pred eecCCcEEEEE---cchhhccccccCceeEEEEEEEEEeccc---h----------------------------------
Confidence 000111222 355444 367889999999999999632 1
Q ss_pred HHHHHHHHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHH
Q 017747 201 DFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEV 280 (366)
Q Consensus 201 D~~~FL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i 280 (366)
+...+++.-.+-|+|||++++..+...... ..-|-|..+.+|+++++
T Consensus 146 ~r~~~~~~~~~~LkpgG~~~l~~~~~~~~~---------------------------------~~gpp~~~~~~el~~lf 192 (229)
T d2bzga1 146 DRKCYADTMFSLLGKKFQYLLCVLSYDPTK---------------------------------HPGPPFYVPHAEIERLF 192 (229)
T ss_dssp GHHHHHHHHHHTEEEEEEEEEEEEECCTTT---------------------------------CCCSSCCCCHHHHHHHH
T ss_pred hhHHHHHHHHhhcCCcceEEEEEcccCCCC---------------------------------CCCCCCCCCHHHHHHHh
Confidence 123345667899999999999987764310 12355778999999999
Q ss_pred hhcCceEEeeEEEEee
Q 017747 281 GREGSFKLDQLDMFQV 296 (366)
Q Consensus 281 ~~~gsf~i~~~e~~~~ 296 (366)
.. + |+|+.+|..+.
T Consensus 193 ~~-~-~~i~~le~~~~ 206 (229)
T d2bzga1 193 GK-I-CNIRCLEKVDA 206 (229)
T ss_dssp TT-T-EEEEEEEEEEC
T ss_pred cC-C-CEEEEEEEecc
Confidence 64 4 88888876543
|
| >d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical methyltransferase TM1389 species: Thermotoga maritima [TaxId: 2336]
Probab=98.74 E-value=9.2e-09 Score=91.18 Aligned_cols=101 Identities=15% Similarity=0.192 Sum_probs=68.2
Q ss_pred CCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCC
Q 017747 48 DPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSP 127 (366)
Q Consensus 48 ~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~ 127 (366)
.++..+|||+|||+|..+.. +.+. ..+|+..|+....-.. . +++ ..
T Consensus 40 ~~~~~~vLDiGcG~G~~~~~--------l~~~----------~~~v~giD~s~~~l~~-----------a-~~~----~~ 85 (246)
T d2avna1 40 LKNPCRVLDLGGGTGKWSLF--------LQER----------GFEVVLVDPSKEMLEV-----------A-REK----GV 85 (246)
T ss_dssp CCSCCEEEEETCTTCHHHHH--------HHTT----------TCEEEEEESCHHHHHH-----------H-HHH----TC
T ss_pred cCCCCEEEEECCCCchhccc--------cccc----------ceEEEEeecccccccc-----------c-ccc----cc
Confidence 44568999999999999864 2221 2689999987532211 1 111 11
Q ss_pred ceEEeccCCCcccccCCCCcccEEEcc-cccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 128 SVYIAGYPGSFYGRLFPNNSLHFIHSS-NSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 128 ~~f~~~vpgSFy~~lfp~~s~~~~~S~-~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
..++. ++..+-.+|++++|+++|. ..+||+.+. ..+|
T Consensus 86 ~~~~~---~~~~~l~~~~~~fD~ii~~~~~~~~~~d~---------------------------------------~~~l 123 (246)
T d2avna1 86 KNVVE---AKAEDLPFPSGAFEAVLALGDVLSYVENK---------------------------------------DKAF 123 (246)
T ss_dssp SCEEE---CCTTSCCSCTTCEEEEEECSSHHHHCSCH---------------------------------------HHHH
T ss_pred ccccc---ccccccccccccccceeeecchhhhhhhH---------------------------------------HHHH
Confidence 23444 3554444899999999985 679997542 1246
Q ss_pred HHHHHHhccCceEEEEee
Q 017747 207 RSRSEELVVGGRMVLILL 224 (366)
Q Consensus 207 ~~Ra~EL~~GG~lvl~~~ 224 (366)
+.-.+-|+|||.+++++.
T Consensus 124 ~~i~r~Lk~gG~~ii~~~ 141 (246)
T d2avna1 124 SEIRRVLVPDGLLIATVD 141 (246)
T ss_dssp HHHHHHEEEEEEEEEEEE
T ss_pred HHHHhhcCcCcEEEEEEC
Confidence 666899999999999984
|
| >d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TehB-like domain: Putative methyltransferase TehB species: Salmonella typhimurium [TaxId: 90371]
Probab=98.70 E-value=5.7e-09 Score=90.90 Aligned_cols=109 Identities=15% Similarity=0.185 Sum_probs=71.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
.+-+|+|+|||+|.+++.+ .++ | .+|+..|+..+....+-+.. ...+ ..++
T Consensus 30 ~~grvLDiGcG~G~~~~~l--------a~~-----g-----~~v~gvD~s~~~l~~a~~~~--------~~~~---~~~~ 80 (198)
T d2i6ga1 30 APGRTLDLGCGNGRNSLYL--------AAN-----G-----YDVTAWDKNPASMANLERIK--------AAEG---LDNL 80 (198)
T ss_dssp CSCEEEEETCTTSHHHHHH--------HHT-----T-----CEEEEEESCHHHHHHHHHHH--------HHTT---CTTE
T ss_pred CCCcEEEECCCCCHHHHHH--------HHH-----h-----hhhccccCcHHHHHHHHHHh--------hhcc---ccch
Confidence 4569999999999999753 222 1 67889998765433322111 1111 2232
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
-+ .-+++ ..+.|++++|++++..++|++.. .++..+|+.-
T Consensus 81 ~~--~~~d~-~~~~~~~~fD~I~~~~~~~~~~~-------------------------------------~~~~~~l~~~ 120 (198)
T d2i6ga1 81 QT--DLVDL-NTLTFDGEYDFILSTVVMMFLEA-------------------------------------QTIPGLIANM 120 (198)
T ss_dssp EE--EECCT-TTCCCCCCEEEEEEESCGGGSCT-------------------------------------THHHHHHHHH
T ss_pred hh--hheec-ccccccccccEEEEeeeeecCCH-------------------------------------HHHHHHHHHH
Confidence 11 11344 55667899999999999999633 1344567888
Q ss_pred HHHhccCceEEEEeecCC
Q 017747 210 SEELVVGGRMVLILLGRI 227 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~ 227 (366)
++-|+|||++++......
T Consensus 121 ~~~L~pgG~~~~~~~~~~ 138 (198)
T d2i6ga1 121 QRCTKPGGYNLIVAAMDT 138 (198)
T ss_dssp HHTEEEEEEEEEEEEBC-
T ss_pred HHHcCCCcEEEEEEecCC
Confidence 999999999999876543
|
| >d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Putative methyltransferase CAC2371 species: Clostridium acetobutylicum [TaxId: 1488]
Probab=98.65 E-value=1e-08 Score=92.04 Aligned_cols=109 Identities=16% Similarity=0.222 Sum_probs=73.3
Q ss_pred CCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCC
Q 017747 48 DPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSP 127 (366)
Q Consensus 48 ~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~ 127 (366)
.+++-+|+|+|||+|..|.. +.++ ..+++.-|+..++...+.+..+ ..+ .+
T Consensus 35 ~~~~~~vLDiGCG~G~~~~~--------l~~~----------g~~v~GvD~S~~ml~~A~~~~~--------~~~---~~ 85 (246)
T d1y8ca_ 35 NLVFDDYLDLACGTGNLTEN--------LCPK----------FKNTWAVDLSQEMLSEAENKFR--------SQG---LK 85 (246)
T ss_dssp TCCTTEEEEETCTTSTTHHH--------HGGG----------SSEEEEECSCHHHHHHHHHHHH--------HTT---CC
T ss_pred CCCCCeEEEEeCcCCHHHHH--------HHHh----------CCccEeeccchhhhhhcccccc--------ccC---cc
Confidence 35567999999999999874 2221 1688999998765443332211 111 22
Q ss_pred ceEEeccCCCcccccCCCCcccEEEcc-cccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 128 SVYIAGYPGSFYGRLFPNNSLHFIHSS-NSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 128 ~~f~~~vpgSFy~~lfp~~s~~~~~S~-~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
--|+.+ ++.+ +-+++++|+++|. .+++++.. .+|+.++|
T Consensus 86 v~~~~~---d~~~-~~~~~~fD~i~~~~~~~~~~~~------------------------------------~~~~~~~l 125 (246)
T d1y8ca_ 86 PRLACQ---DISN-LNINRKFDLITCCLDSTNYIID------------------------------------SDDLKKYF 125 (246)
T ss_dssp CEEECC---CGGG-CCCSCCEEEEEECTTGGGGCCS------------------------------------HHHHHHHH
T ss_pred ceeecc---chhh-hcccccccccceeeeeeeccCC------------------------------------HHHHHHHH
Confidence 234543 5533 3356799999976 67888544 25778889
Q ss_pred HHHHHHhccCceEEEEeec
Q 017747 207 RSRSEELVVGGRMVLILLG 225 (366)
Q Consensus 207 ~~Ra~EL~~GG~lvl~~~g 225 (366)
+.-++-|+|||.|++.+..
T Consensus 126 ~~~~~~LkpgG~~i~~~~~ 144 (246)
T d1y8ca_ 126 KAVSNHLKEGGVFIFDINS 144 (246)
T ss_dssp HHHHTTEEEEEEEEEEEEC
T ss_pred HHHHHhCCCCeEEEEEeCC
Confidence 9999999999999987653
|
| >d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: mRNA cap (Guanine N-7) methyltransferase domain: mRNA cap (Guanine N-7) methyltransferase species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]
Probab=98.62 E-value=7.4e-08 Score=86.84 Aligned_cols=112 Identities=23% Similarity=0.309 Sum_probs=74.7
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
++.-+|+|+|||+|..+.. +.+. + . -+|+..|+.......+.+.. .. .+. ..+
T Consensus 23 ~~~~~VLDlGCG~G~~~~~--------~~~~-----~---~-~~v~GiD~S~~~l~~A~~r~-------~~-~~~--~~~ 75 (252)
T d1ri5a_ 23 KRGDSVLDLGCGKGGDLLK--------YERA-----G---I-GEYYGVDIAEVSINDARVRA-------RN-MKR--RFK 75 (252)
T ss_dssp CTTCEEEEETCTTTTTHHH--------HHHH-----T---C-SEEEEEESCHHHHHHHHHHH-------HT-SCC--SSE
T ss_pred CCcCEEEEecccCcHHHHH--------HHHc-----C---C-CeEEEecCCHHHHHHHHHHH-------Hh-cCC--Ccc
Confidence 4458999999999998753 2221 1 1 47899999875443332211 11 111 112
Q ss_pred e-EEeccCCCccccc-CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYGRL-FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 129 ~-f~~~vpgSFy~~l-fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
+ |..+ +..... .+++++|+++|..++||+-.. .+|+..+|
T Consensus 76 v~f~~~---D~~~~~~~~~~~fD~V~~~~~l~~~~~~-----------------------------------~~~~~~~l 117 (252)
T d1ri5a_ 76 VFFRAQ---DSYGRHMDLGKEFDVISSQFSFHYAFST-----------------------------------SESLDIAQ 117 (252)
T ss_dssp EEEEES---CTTTSCCCCSSCEEEEEEESCGGGGGSS-----------------------------------HHHHHHHH
T ss_pred eEEEEc---chhhhcccccccceEEEEcceeeecCCC-----------------------------------HHHHHHHH
Confidence 3 4443 444444 467899999999999997541 35778889
Q ss_pred HHHHHHhccCceEEEEeec
Q 017747 207 RSRSEELVVGGRMVLILLG 225 (366)
Q Consensus 207 ~~Ra~EL~~GG~lvl~~~g 225 (366)
+.-++-|+|||+|+++++.
T Consensus 118 ~~i~~~Lk~gG~~i~~~~~ 136 (252)
T d1ri5a_ 118 RNIARHLRPGGYFIMTVPS 136 (252)
T ss_dssp HHHHHTEEEEEEEEEEEEC
T ss_pred HHHhceeCCCCEEEEEecC
Confidence 9999999999999998753
|
| >d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: BC2162-like domain: Methyltransferase BC2162 species: Bacillus cereus [TaxId: 1396]
Probab=98.53 E-value=1.4e-08 Score=93.67 Aligned_cols=107 Identities=15% Similarity=0.149 Sum_probs=68.3
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
.++.+|+|+|||+|..+.. +.+. -++..+|+..|+..+.....-+... . .+ ...
T Consensus 26 ~~~~~ILDiGcG~G~~~~~--------la~~-------~~~~~~v~giD~s~~~l~~a~~~~~-------~---~~-~~~ 79 (281)
T d2gh1a1 26 TKPVHIVDYGCGYGYLGLV--------LMPL-------LPEGSKYTGIDSGETLLAEARELFR-------L---LP-YDS 79 (281)
T ss_dssp CSCCEEEEETCTTTHHHHH--------HTTT-------SCTTCEEEEEECCHHHHHHHHHHHH-------S---SS-SEE
T ss_pred CCcCEEEEecCcCCHHHHH--------HHHh-------CCCCCEEEEEecchhHhhhhhcccc-------c---cc-ccc
Confidence 4689999999999998864 2221 1223678899987543332221111 0 00 112
Q ss_pred eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
-|.. +++.+ +-+++++|+++|+.++||+++ |. .+|+.
T Consensus 80 ~f~~---~d~~~-~~~~~~fD~v~~~~~l~~~~d-~~--------------------------------------~~l~~ 116 (281)
T d2gh1a1 80 EFLE---GDATE-IELNDKYDIAICHAFLLHMTT-PE--------------------------------------TMLQK 116 (281)
T ss_dssp EEEE---SCTTT-CCCSSCEEEEEEESCGGGCSS-HH--------------------------------------HHHHH
T ss_pred cccc---ccccc-ccccCCceEEEEehhhhcCCC-HH--------------------------------------HHHHH
Confidence 3444 35543 434578999999999999865 22 23556
Q ss_pred HHHHhccCceEEEEee
Q 017747 209 RSEELVVGGRMVLILL 224 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~ 224 (366)
-.+-|||||++++.-+
T Consensus 117 ~~~~LkpgG~lii~~~ 132 (281)
T d2gh1a1 117 MIHSVKKGGKIICFEP 132 (281)
T ss_dssp HHHTEEEEEEEEEEEC
T ss_pred HHHHcCcCcEEEEEEC
Confidence 6889999999998764
|
| >d1fp1d2 c.66.1.12 (D:129-372) Chalcone O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Plant O-methyltransferase, C-terminal domain domain: Chalcone O-methyltransferase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=98.50 E-value=1.5e-06 Score=78.37 Aligned_cols=150 Identities=18% Similarity=0.187 Sum_probs=92.4
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+...+|+|+|||+|..++. +.++ .|+++++.-|||. +.... +. ..+
T Consensus 80 ~~~~~vlDiGGG~G~~~~~--------l~~~--------~P~l~~~v~Dlp~-----vi~~~-----------~~--~~r 125 (244)
T d1fp1d2 80 EGISTLVDVGGGSGRNLEL--------IISK--------YPLIKGINFDLPQ-----VIENA-----------PP--LSG 125 (244)
T ss_dssp TTCSEEEEETCTTSHHHHH--------HHHH--------CTTCEEEEEECHH-----HHTTC-----------CC--CTT
T ss_pred cCCcEEEEecCCCcHHHHH--------HHHH--------CCCCeEEEecchh-----hhhcc-----------CC--CCC
Confidence 4567899999999998874 4443 4678999999984 11111 11 122
Q ss_pred eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
+..++|+|++. .|.. |+++.++.||..++ ++-.+.|+.
T Consensus 126 --i~~~~gd~~~~-~p~~--D~~~l~~vLh~~~d-------------------------------------e~~~~iL~~ 163 (244)
T d1fp1d2 126 --IEHVGGDMFAS-VPQG--DAMILKAVCHNWSD-------------------------------------EKCIEFLSN 163 (244)
T ss_dssp --EEEEECCTTTC-CCCE--EEEEEESSGGGSCH-------------------------------------HHHHHHHHH
T ss_pred --eEEecCCcccc-cccc--eEEEEehhhhhCCH-------------------------------------HHHHHHHHH
Confidence 23467899875 4543 99999999997533 233456888
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEE
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKL 288 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i 288 (366)
.++-|+|||++++.=.-.++.... .....+...+...+. +.-.| -.+|.+|++++++++| |+.
T Consensus 164 ~~~aL~pgg~llI~e~v~~~~~~~-~~~~~~~~~~d~~m~-~~~~g--------------~ert~~e~~~ll~~AG-F~~ 226 (244)
T d1fp1d2 164 CHKALSPNGKVIIVEFILPEEPNT-SEESKLVSTLDNLMF-ITVGG--------------RERTEKQYEKLSKLSG-FSK 226 (244)
T ss_dssp HHHHEEEEEEEEEEEEEECSSCCS-SHHHHHHHHHHHHHH-HHHSC--------------CCEEHHHHHHHHHHTT-CSE
T ss_pred HHHHcCCCcEEEEEEEEecCCCCC-chHHHHHHHHHHHHH-hhCCC--------------cCCCHHHHHHHHHHcC-CCc
Confidence 899999999999886554432111 100001111111111 01122 2368999999999999 876
Q ss_pred eeE
Q 017747 289 DQL 291 (366)
Q Consensus 289 ~~~ 291 (366)
.++
T Consensus 227 v~v 229 (244)
T d1fp1d2 227 FQV 229 (244)
T ss_dssp EEE
T ss_pred eEE
Confidence 544
|
| >d1fp2a2 c.66.1.12 (A:109-352) Isoflavone O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Plant O-methyltransferase, C-terminal domain domain: Isoflavone O-methyltransferase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=98.35 E-value=2.9e-06 Score=76.50 Aligned_cols=147 Identities=18% Similarity=0.224 Sum_probs=91.7
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
....+|+|+|||+|..++. +.++ .|+++++.-|||. +....+ . ..+
T Consensus 79 ~~~~~vvDvGGG~G~~~~~--------l~~~--------~P~l~~~v~Dlp~-----vi~~~~-----------~--~~r 124 (244)
T d1fp2a2 79 DGLESIVDVGGGTGTTAKI--------ICET--------FPKLKCIVFDRPQ-----VVENLS-----------G--SNN 124 (244)
T ss_dssp TTCSEEEEETCTTSHHHHH--------HHHH--------CTTCEEEEEECHH-----HHTTCC-----------C--BTT
T ss_pred cCceEEEEecCCccHHHHH--------HHHh--------CCCCeEEEecCHH-----HHHhCc-----------c--cCc
Confidence 3457899999999998864 4443 4668999999983 111111 1 123
Q ss_pred eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
+..++|+|++.. | ..|+++..+.||-.++ ++-.++|+.
T Consensus 125 --v~~~~gD~f~~~-p--~aD~~~l~~vLHdw~d-------------------------------------~~~~~iL~~ 162 (244)
T d1fp2a2 125 --LTYVGGDMFTSI-P--NADAVLLKYILHNWTD-------------------------------------KDCLRILKK 162 (244)
T ss_dssp --EEEEECCTTTCC-C--CCSEEEEESCGGGSCH-------------------------------------HHHHHHHHH
T ss_pred --eEEEecCcccCC-C--CCcEEEEEeecccCCh-------------------------------------HHHHHHHHH
Confidence 334668998753 4 4599999999997433 234567889
Q ss_pred HHHHhccC---ceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHH---HHcCccchhhhcccCccccCCCHHHHHHHHhh
Q 017747 209 RSEELVVG---GRMVLILLGRIGPDHVDRGNSFFWELLSRSLAIL---VSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGR 282 (366)
Q Consensus 209 Ra~EL~~G---G~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~m---v~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~ 282 (366)
.++.|+|| |++++.=.-.++.. . . . ... ....+.+| +-.| ..||.+|+++++++
T Consensus 163 ~~~al~pgg~~~~lli~e~~~~~~~-~--~-~-~~~-~~~~~~dl~m~~~~G--------------~ert~~e~~~ll~~ 222 (244)
T d1fp2a2 163 CKEAVTNDGKRGKVTIIDMVIDKKK-D--E-N-QVT-QIKLLMDVNMACLNG--------------KERNEEEWKKLFIE 222 (244)
T ss_dssp HHHHHSGGGCCCEEEEEECEECTTT-S--C-H-HHH-HHHHHHHHHGGGGTC--------------CCEEHHHHHHHHHH
T ss_pred HHHHcCcccCCcEEEEEEeecCCCC-C--C-c-hHH-HHHHHHHHHHHhCCC--------------cCCCHHHHHHHHHH
Confidence 99999999 66666533222211 1 0 1 111 11222222 1122 35799999999999
Q ss_pred cCceEEeeEE
Q 017747 283 EGSFKLDQLD 292 (366)
Q Consensus 283 ~gsf~i~~~e 292 (366)
+| |++.++.
T Consensus 223 AG-f~~~~i~ 231 (244)
T d1fp2a2 223 AG-FQHYKIS 231 (244)
T ss_dssp TT-CCEEEEE
T ss_pred cC-CceEEEE
Confidence 99 8876654
|
| >d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Glycine N-methyltransferase domain: Glycine N-methyltransferase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.35 E-value=3.3e-07 Score=84.29 Aligned_cols=115 Identities=14% Similarity=0.161 Sum_probs=70.9
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceE
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVY 130 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 130 (366)
..+|||+|||+|..++. |.++ ..+|+..|+..++-+.+.+........... .....
T Consensus 57 ~~~vLD~GcG~G~~~~~--------la~~----------g~~v~gvD~S~~ml~~A~~~~~~~~~~~~~------~~~~~ 112 (292)
T d1xvaa_ 57 CHRVLDVACGTGVDSIM--------LVEE----------GFSVTSVDASDKMLKYALKERWNRRKEPAF------DKWVI 112 (292)
T ss_dssp CCEEEESSCTTSHHHHH--------HHHT----------TCEEEEEESCHHHHHHHHHHHHHTTTSHHH------HTCEE
T ss_pred CCEEEEecCCCcHHHHH--------HHHc----------CCeeeeccCchHHHHHHHHHHHhccccccc------ceeee
Confidence 46899999999999875 3221 168999999876544333222110000000 00111
Q ss_pred EeccCCCcc---cccCCCCcccEEEcc-cccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 131 IAGYPGSFY---GRLFPNNSLHFIHSS-NSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 131 ~~~vpgSFy---~~lfp~~s~~~~~S~-~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
. ..+|. ..+.+.+++|++++. .+++++... ..+ ..|...+|
T Consensus 113 ~---~~~~~~~~~~~~~~~~fd~v~~~~~~~~~~~~~---~~~-----------------------------~~~~~~~l 157 (292)
T d1xvaa_ 113 E---EANWLTLDKDVPAGDGFDAVICLGNSFAHLPDS---KGD-----------------------------QSEHRLAL 157 (292)
T ss_dssp E---ECCGGGHHHHSCCTTCEEEEEECSSCGGGSCCT---TSS-----------------------------SHHHHHHH
T ss_pred e---eccccccccccCCCCCceEEEEecCchhhcCCc---ccC-----------------------------hHHHHHHH
Confidence 1 12332 234567789988865 588886442 211 24677889
Q ss_pred HHHHHHhccCceEEEEee
Q 017747 207 RSRSEELVVGGRMVLILL 224 (366)
Q Consensus 207 ~~Ra~EL~~GG~lvl~~~ 224 (366)
+.-++-|+|||+|++.+.
T Consensus 158 ~~~~~~LkpgG~li~~~~ 175 (292)
T d1xvaa_ 158 KNIASMVRPGGLLVIDHR 175 (292)
T ss_dssp HHHHHTEEEEEEEEEEEE
T ss_pred HHHHHHcCcCcEEEEeec
Confidence 999999999999999875
|
| >d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TrmB-like domain: tRNA (guanine-N(7)-)-methyltransferase TrmB species: Bacillus subtilis [TaxId: 1423]
Probab=98.29 E-value=6.2e-07 Score=78.94 Aligned_cols=111 Identities=14% Similarity=0.187 Sum_probs=70.9
Q ss_pred EEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceEEe
Q 017747 53 NIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVYIA 132 (366)
Q Consensus 53 ~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~~ 132 (366)
.|+|+|||+|..++. +.+. .|+..++..|+..+....+.+.. .+.+ ..++.+.
T Consensus 32 lvLeIGcG~G~~~~~--------lA~~--------~p~~~~iGiD~~~~~i~~a~~~~--------~~~~---l~Nv~~~ 84 (204)
T d2fcaa1 32 IHIEVGTGKGQFISG--------MAKQ--------NPDINYIGIELFKSVIVTAVQKV--------KDSE---AQNVKLL 84 (204)
T ss_dssp EEEEECCTTSHHHHH--------HHHH--------CTTSEEEEECSCHHHHHHHHHHH--------HHSC---CSSEEEE
T ss_pred eEEEEEecCcHHHHH--------HHHh--------CCCCcEEEeecchHHHHHHHHHH--------HHHh---ccCchhc
Confidence 589999999999874 3332 46799999999755433332211 1112 2355333
Q ss_pred ccCCCcc--cccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 017747 133 GYPGSFY--GRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRS 210 (366)
Q Consensus 133 ~vpgSFy--~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra 210 (366)
- +++. -..+|++++|.++..+..+|..+. . . |.++ + ...||+.-+
T Consensus 85 ~--~Da~~l~~~~~~~~~d~v~i~fp~P~~k~~-h-~---------k~Rl---------~-----------~~~~l~~~~ 131 (204)
T d2fcaa1 85 N--IDADTLTDVFEPGEVKRVYLNFSDPWPKKR-H-E---------KRRL---------T-----------YSHFLKKYE 131 (204)
T ss_dssp C--CCGGGHHHHCCTTSCCEEEEESCCCCCSGG-G-G---------GGST---------T-----------SHHHHHHHH
T ss_pred c--cchhhhhcccCchhhhccccccccccchhh-h-c---------chhh---------h-----------HHHHHHHHH
Confidence 2 3332 345899999999999999994331 1 0 0000 0 124677888
Q ss_pred HHhccCceEEEEe
Q 017747 211 EELVVGGRMVLIL 223 (366)
Q Consensus 211 ~EL~~GG~lvl~~ 223 (366)
+-|||||.|++.+
T Consensus 132 r~LkpgG~l~i~T 144 (204)
T d2fcaa1 132 EVMGKGGSIHFKT 144 (204)
T ss_dssp HHHTTSCEEEEEE
T ss_pred HhCCCCcEEEEEE
Confidence 9999999999875
|
| >d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Thermotoga maritima [TaxId: 2336]
Probab=98.27 E-value=5.3e-07 Score=79.71 Aligned_cols=83 Identities=10% Similarity=0.109 Sum_probs=51.5
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|+.|..+ .+.. .+.-.|+..|.........-+.+. . .+. .+..
T Consensus 75 ~g~~VLdiG~GtG~~s~~l--------a~~~-------~~~g~V~~id~~~~~~~~a~~~~~-------~-~~~--~n~~ 129 (213)
T d1dl5a1 75 KGMRVLEIGGGTGYNAAVM--------SRVV-------GEKGLVVSVEYSRKICEIAKRNVE-------R-LGI--ENVI 129 (213)
T ss_dssp TTCEEEEECCTTSHHHHHH--------HHHH-------CTTCEEEEEESCHHHHHHHHHHHH-------H-TTC--CSEE
T ss_pred ccceEEEecCccchhHHHH--------HHHh-------CCCCcEEEeecchhhHHHhhhhHh-------h-hcc--cccc
Confidence 4689999999999999753 2221 233678888875432222222111 1 111 1233
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccc
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWL 160 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWl 160 (366)
++. ++..+-+++++++|.+++..+++++
T Consensus 130 ~~~---~d~~~~~~~~~~fD~I~~~~~~~~~ 157 (213)
T d1dl5a1 130 FVC---GDGYYGVPEFSPYDVIFVTVGVDEV 157 (213)
T ss_dssp EEE---SCGGGCCGGGCCEEEEEECSBBSCC
T ss_pred ccc---CchHHccccccchhhhhhhccHHHh
Confidence 444 4666667778899999999998863
|
| >d1kyza2 c.66.1.12 (A:120-362) Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Plant O-methyltransferase, C-terminal domain domain: Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=98.23 E-value=1e-05 Score=72.53 Aligned_cols=151 Identities=16% Similarity=0.146 Sum_probs=86.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
..-+|+|+|||+|..++. |.++ .|.++++.-|||.- +.. . .. ..++
T Consensus 81 ~~~~vvDvGGG~G~~~~~--------l~~~--------~P~l~~~v~Dlp~v--------i~~--------~-~~-~~r~ 126 (243)
T d1kyza2 81 GLKSLVDVGGGTGAVINT--------IVSK--------YPTIKGINFDLPHV--------IED--------A-PS-YPGV 126 (243)
T ss_dssp SCSEEEEETCTTSHHHHH--------HHHH--------CTTSEEEEEECTTT--------TTT--------C-CC-CTTE
T ss_pred CCcEEEEecCCCcHHHHH--------HHHH--------CCCCeEEEcccHHh--------hhh--------c-cc-CCce
Confidence 356899999999999874 4443 46689999999963 110 0 00 1222
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
..++++|++. .|... +.+-.+.+|=. | .+|...+|+.-
T Consensus 127 --~~~~~d~~~~-~P~ad--~~~l~~vlh~~---~----------------------------------d~~~~~iL~~~ 164 (243)
T d1kyza2 127 --EHVGGDMFVS-IPKAD--AVFMKWICHDW---S----------------------------------DEHCLKFLKNC 164 (243)
T ss_dssp --EEEECCTTTC-CCCCS--CEECSSSSTTS---C----------------------------------HHHHHHHHHHH
T ss_pred --EEeccccccc-CCCcc--eEEEEEEeecC---C----------------------------------HHHHHHHHHHH
Confidence 3456899875 46543 33333333311 1 13556778899
Q ss_pred HHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEe
Q 017747 210 SEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLD 289 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~ 289 (366)
++-|+|||++++.=.-..+.... . ..-...+...+.-|+.. .--..+|.+|++++++++| |+..
T Consensus 165 ~~al~pgg~~li~d~~~~~~~~~--~-~~~~~~~~~d~~ml~~~------------~~g~ert~~e~~~ll~~AG-f~~v 228 (243)
T d1kyza2 165 YEALPDNGKVIVAECILPVAPDS--S-LATKGVVHIDVIMLAHN------------PGGKERTQKEFEDLAKGAG-FQGF 228 (243)
T ss_dssp HHHCCSSSCEEEEECEECSSCCC--C-HHHHHHHHHHHHHHHHC------------SSCCCEEHHHHHHHHHHHC-CSCE
T ss_pred HHhcCCCceEEEEEEEecCCCCC--c-hhhHHHHHHHHHHHhhC------------CCCCcCCHHHHHHHHHHcC-CCcE
Confidence 99999999998874332221100 0 00001111112222211 0113578999999999999 8876
Q ss_pred eEE
Q 017747 290 QLD 292 (366)
Q Consensus 290 ~~e 292 (366)
++.
T Consensus 229 kv~ 231 (243)
T d1kyza2 229 KVH 231 (243)
T ss_dssp EEE
T ss_pred EEE
Confidence 553
|
| >d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.17 E-value=1.7e-06 Score=76.98 Aligned_cols=87 Identities=10% Similarity=-0.049 Sum_probs=50.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
+..+|+|+|||+|+.|..+. +.. .|.-+|+..|.-..-....-+.+... .+.. .+. ....
T Consensus 76 ~g~~VLdiG~GsGy~ta~la--------~l~-------~~~g~V~~ie~~~~l~~~a~~~l~~~--~~~~-~~~--~~~~ 135 (224)
T d1i1na_ 76 EGAKALDVGSGSGILTACFA--------RMV-------GCTGKVIGIDHIKELVDDSVNNVRKD--DPTL-LSS--GRVQ 135 (224)
T ss_dssp TTCEEEEETCTTSHHHHHHH--------HHH-------CTTCEEEEEESCHHHHHHHHHHHHHH--CTHH-HHT--SSEE
T ss_pred CCCeEEEecCCCCHHHHHHH--------HHh-------CCCceEEEEcCCHHHHHHHHHhcccc--Cccc-ccc--cceE
Confidence 35899999999999997532 221 23478888887653333222222100 0000 000 1112
Q ss_pred EEeccCCCcccccCCCCcccEEEccccccc
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHW 159 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhW 159 (366)
+.. |+.+.-.++.+++|.+++..++++
T Consensus 136 ~~~---gD~~~~~~~~~~fD~I~~~~~~~~ 162 (224)
T d1i1na_ 136 LVV---GDGRMGYAEEAPYDAIHVGAAAPV 162 (224)
T ss_dssp EEE---SCGGGCCGGGCCEEEEEECSBBSS
T ss_pred EEE---eecccccchhhhhhhhhhhcchhh
Confidence 333 466666778889999999999876
|
| >d1yzha1 c.66.1.53 (A:8-211) tRNA (guanine-N(7)-)-methyltransferase TrmB {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TrmB-like domain: tRNA (guanine-N(7)-)-methyltransferase TrmB species: Streptococcus pneumoniae [TaxId: 1313]
Probab=98.16 E-value=1.3e-06 Score=76.90 Aligned_cols=112 Identities=14% Similarity=0.221 Sum_probs=71.4
Q ss_pred EEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceE-E
Q 017747 53 NIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVY-I 131 (366)
Q Consensus 53 ~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f-~ 131 (366)
.|+|+|||+|.+++. +.+. .|+..++..|+..+....+.+... +.+ ..++. +
T Consensus 34 lvLdIGcG~G~~~~~--------lA~~--------~p~~~~iGid~~~~~v~~a~~~~~--------~~~---l~Ni~~~ 86 (204)
T d1yzha1 34 IHVEVGSGKGAFVSG--------MAKQ--------NPDINYIGIDIQKSVLSYALDKVL--------EVG---VPNIKLL 86 (204)
T ss_dssp EEEEESCTTSHHHHH--------HHHH--------CTTSEEEEEESCHHHHHHHHHHHH--------HHC---CSSEEEE
T ss_pred eEEEEeccCCHHHHH--------HHHH--------CCCCceEEEeccHHHHHHHHHhhh--------hhc---cccceee
Confidence 589999999999874 3332 467999999987654443332111 111 23553 3
Q ss_pred eccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017747 132 AGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSE 211 (366)
Q Consensus 132 ~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~ 211 (366)
.+....+ ...+|++|+|.++..+.-.|-.+-.. |.++ + -..||+.-++
T Consensus 87 ~~da~~l-~~~~~~~~~~~i~i~fPdPw~K~~h~-----------krRl---------~-----------~~~~l~~~~~ 134 (204)
T d1yzha1 87 WVDGSDL-TDYFEDGEIDRLYLNFSDPWPKKRHE-----------KRRL---------T-----------YKTFLDTFKR 134 (204)
T ss_dssp ECCSSCG-GGTSCTTCCSEEEEESCCCCCSGGGG-----------GGST---------T-----------SHHHHHHHHH
T ss_pred ecCHHHH-hhhccCCceehhcccccccccchhhh-----------hhhh---------h-----------HHHHHHHHHH
Confidence 3322333 46789999999999998888333110 0000 0 0356788899
Q ss_pred HhccCceEEEEe
Q 017747 212 ELVVGGRMVLIL 223 (366)
Q Consensus 212 EL~~GG~lvl~~ 223 (366)
-|+|||.|.+.+
T Consensus 135 ~LkpgG~l~i~T 146 (204)
T d1yzha1 135 ILPENGEIHFKT 146 (204)
T ss_dssp HSCTTCEEEEEE
T ss_pred hCCCCcEEEEEE
Confidence 999999998865
|
| >d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.03 E-value=1e-05 Score=72.10 Aligned_cols=110 Identities=14% Similarity=0.093 Sum_probs=65.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|||+|||+|..+..+ .+. .|.-+|+.-|+..-....+-.... .. ....
T Consensus 74 pG~~VLDlGcGsG~~~~~l--------a~~--------~~~g~V~aVDiS~~~i~~a~~~a~----------~~--~ni~ 125 (230)
T d1g8sa_ 74 RDSKILYLGASAGTTPSHV--------ADI--------ADKGIVYAIEYAPRIMRELLDACA----------ER--ENII 125 (230)
T ss_dssp TTCEEEEESCCSSHHHHHH--------HHH--------TTTSEEEEEESCHHHHHHHHHHTT----------TC--TTEE
T ss_pred CCCEEEEeCEEcCHHHHHH--------HHh--------CCCCEEEEEeCcHHHHHHHHHHHh----------hh--cccc
Confidence 3589999999999988753 222 134689999986532222211110 01 1223
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
.+.+..... ...++.+.++.+++..+||..+ ...++..-
T Consensus 126 ~i~~d~~~~--~~~~~~~~~v~~i~~~~~~~~~---------------------------------------~~~~l~~~ 164 (230)
T d1g8sa_ 126 PILGDANKP--QEYANIVEKVDVIYEDVAQPNQ---------------------------------------AEILIKNA 164 (230)
T ss_dssp EEECCTTCG--GGGTTTCCCEEEEEECCCSTTH---------------------------------------HHHHHHHH
T ss_pred eEEEeeccC--cccccccceeEEeeccccchHH---------------------------------------HHHHHHHH
Confidence 444332222 2245566777777777777433 12345666
Q ss_pred HHHhccCceEEEEeecCCC
Q 017747 210 SEELVVGGRMVLILLGRIG 228 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~~ 228 (366)
.+-|+|||+++++.-.+..
T Consensus 165 ~r~LKpgG~~~i~~k~~~~ 183 (230)
T d1g8sa_ 165 KWFLKKGGYGMIAIKARSI 183 (230)
T ss_dssp HHHEEEEEEEEEEEEGGGT
T ss_pred HHhcccCceEEEEeecccc
Confidence 8899999999998876643
|
| >d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein Ta0852 species: Thermoplasma acidophilum [TaxId: 2303]
Probab=98.01 E-value=1.1e-05 Score=72.99 Aligned_cols=74 Identities=9% Similarity=0.132 Sum_probs=43.2
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce-
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV- 129 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~- 129 (366)
..+|+|+|||+|..|+.+...+ .|.-+|+..|........+-+.+. . .+. ..++
T Consensus 86 G~rVLEiG~GsG~lt~~la~~v---------------~~~g~V~~vD~~e~~~~~A~~n~~-------~-~~~--~~nv~ 140 (250)
T d1yb2a1 86 GMDILEVGVGSGNMSSYILYAL---------------NGKGTLTVVERDEDNLKKAMDNLS-------E-FYD--IGNVR 140 (250)
T ss_dssp TCEEEEECCTTSHHHHHHHHHH---------------TTSSEEEEECSCHHHHHHHHHHHH-------T-TSC--CTTEE
T ss_pred cCEEEEeeeeCcHHHHHHHHHh---------------CCCcEEEEEECCHHHHHHHHHHHH-------H-hcC--CCceE
Confidence 4899999999999998644333 234788888875421111111111 1 111 1233
Q ss_pred EEeccCCCcccccCCCCcccEEEc
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHS 153 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S 153 (366)
+.. +++. ..+|++++|.++.
T Consensus 141 ~~~---~Di~-~~~~~~~fD~V~l 160 (250)
T d1yb2a1 141 TSR---SDIA-DFISDQMYDAVIA 160 (250)
T ss_dssp EEC---SCTT-TCCCSCCEEEEEE
T ss_pred EEE---eeee-cccccceeeeeee
Confidence 222 4664 4478899999985
|
| >d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 1, PRMT1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.00 E-value=1.6e-05 Score=73.83 Aligned_cols=104 Identities=13% Similarity=0.045 Sum_probs=65.9
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceE
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVY 130 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 130 (366)
.-+|+|+|||+|..|+.+ .+. | + -+|+..|...+ ...+-+ ....++.. ..-.+
T Consensus 34 ~~~VLDiGcG~G~ls~~a--------a~~-----G---a-~~V~avd~s~~-~~~a~~--------~~~~n~~~-~~v~~ 86 (316)
T d1oria_ 34 DKVVLDVGSGTGILCMFA--------AKA-----G---A-RKVIGIECSSI-SDYAVK--------IVKANKLD-HVVTI 86 (316)
T ss_dssp TCEEEEETCTTSHHHHHH--------HHT-----T---C-SEEEEEECSTT-HHHHHH--------HHHHTTCT-TTEEE
T ss_pred cCEEEEEecCCcHHHHHH--------HHh-----C---C-CEEEEEcCcHH-Hhhhhh--------HHHHhCCc-cccce
Confidence 467999999999988752 121 2 2 57899997543 221111 11112221 11223
Q ss_pred EeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 017747 131 IAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRS 210 (366)
Q Consensus 131 ~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra 210 (366)
+. |+..+--+|.+++|+++|....|.+..- .++..+|.+|.
T Consensus 87 ~~---~~~~~~~~~~~~~D~ivs~~~~~~l~~e------------------------------------~~~~~~l~~~~ 127 (316)
T d1oria_ 87 IK---GKVEEVELPVEKVDIIISEWMGYCLFYE------------------------------------SMLNTVLHARD 127 (316)
T ss_dssp EE---SCTTTCCCSSSCEEEEEECCCBBTBTBT------------------------------------CCHHHHHHHHH
T ss_pred Ee---ccHHHcccccceeEEEeeeeeeeeeccH------------------------------------HHHHHHHHHHH
Confidence 33 5665656899999999998777775431 23456788999
Q ss_pred HHhccCceEE
Q 017747 211 EELVVGGRMV 220 (366)
Q Consensus 211 ~EL~~GG~lv 220 (366)
+-|+|||+++
T Consensus 128 r~Lkp~G~ii 137 (316)
T d1oria_ 128 KWLAPDGLIF 137 (316)
T ss_dssp HHEEEEEEEE
T ss_pred hcCCCCeEEE
Confidence 9999999987
|
| >d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Arginine methyltransferase, HMT1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.95 E-value=1.1e-05 Score=75.29 Aligned_cols=104 Identities=19% Similarity=0.178 Sum_probs=65.0
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceE
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVY 130 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 130 (366)
..+|+|+|||+|..|+.+ .+. |. -+|+..|... . ....+ . ..+..+.. ..-.+
T Consensus 39 ~~~VLDlGcGtG~ls~~a--------a~~-----Ga----~~V~avd~s~-~-~~~a~------~-~~~~~~~~-~~i~~ 91 (328)
T d1g6q1_ 39 DKIVLDVGCGTGILSMFA--------AKH-----GA----KHVIGVDMSS-I-IEMAK------E-LVELNGFS-DKITL 91 (328)
T ss_dssp TCEEEEETCTTSHHHHHH--------HHT-----CC----SEEEEEESST-H-HHHHH------H-HHHHTTCT-TTEEE
T ss_pred cCEEEEeCCCCCHHHHHH--------HHh-----CC----CEEEEEeCCH-H-HHHHH------H-HHHHhCcc-ccceE
Confidence 468999999999998752 221 21 4788888753 1 11111 1 11111211 11234
Q ss_pred EeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 017747 131 IAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRS 210 (366)
Q Consensus 131 ~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra 210 (366)
+. ++..+--+|++++|+++|....+.+.... ++..++.+|.
T Consensus 92 i~---~~~~~l~~~~~~~D~i~se~~~~~~~~e~------------------------------------~~~~~~~a~~ 132 (328)
T d1g6q1_ 92 LR---GKLEDVHLPFPKVDIIISEWMGYFLLYES------------------------------------MMDTVLYARD 132 (328)
T ss_dssp EE---SCTTTSCCSSSCEEEEEECCCBTTBSTTC------------------------------------CHHHHHHHHH
T ss_pred EE---eehhhccCcccceeEEEEEecceeeccch------------------------------------hHHHHHHHHH
Confidence 44 45555558999999999988887754421 2345677889
Q ss_pred HHhccCceEE
Q 017747 211 EELVVGGRMV 220 (366)
Q Consensus 211 ~EL~~GG~lv 220 (366)
+-|+|||+++
T Consensus 133 r~LkpgG~ii 142 (328)
T d1g6q1_ 133 HYLVEGGLIF 142 (328)
T ss_dssp HHEEEEEEEE
T ss_pred hccCCCeEEE
Confidence 9999999985
|
| >d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical protein MJ0882 domain: Hypothetical protein MJ0882 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.93 E-value=2.9e-06 Score=73.19 Aligned_cols=107 Identities=13% Similarity=0.152 Sum_probs=63.6
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
.+..+|+|+|||+|..++. +.+. . -+|+..|+........-+. ... ++.. ..+
T Consensus 51 ~~~~~VLDiGcG~G~~~~~--------la~~--------~--~~v~~iD~s~~~i~~a~~n-------~~~-~~l~-~~~ 103 (194)
T d1dusa_ 51 DKDDDILDLGCGYGVIGIA--------LADE--------V--KSTTMADINRRAIKLAKEN-------IKL-NNLD-NYD 103 (194)
T ss_dssp CTTCEEEEETCTTSHHHHH--------HGGG--------S--SEEEEEESCHHHHHHHHHH-------HHH-TTCT-TSC
T ss_pred CCCCeEEEEeecCChhHHH--------HHhh--------c--cccceeeeccccchhHHHH-------HHH-hCCc-cce
Confidence 3468999999999998864 2221 1 3577778754322222111 111 1111 112
Q ss_pred eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
+- .+.+++++ -++++++|+++|+-.+|+..+ ....||+.
T Consensus 104 i~--~~~~d~~~-~~~~~~fD~Ii~~~p~~~~~~--------------------------------------~~~~~l~~ 142 (194)
T d1dusa_ 104 IR--VVHSDLYE-NVKDRKYNKIITNPPIRAGKE--------------------------------------VLHRIIEE 142 (194)
T ss_dssp EE--EEECSTTT-TCTTSCEEEEEECCCSTTCHH--------------------------------------HHHHHHHH
T ss_pred EE--EEEcchhh-hhccCCceEEEEcccEEecch--------------------------------------hhhhHHHH
Confidence 32 23356666 568899999999766654211 12345666
Q ss_pred HHHHhccCceEEEEe
Q 017747 209 RSEELVVGGRMVLIL 223 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~ 223 (366)
-.+-|+|||+|++..
T Consensus 143 ~~~~LkpgG~l~i~~ 157 (194)
T d1dusa_ 143 GKELLKDNGEIWVVI 157 (194)
T ss_dssp HHHHEEEEEEEEEEE
T ss_pred HHHhcCcCcEEEEEE
Confidence 678899999998865
|
| >d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Probable methyltransferase Rv2118c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.92 E-value=9.5e-06 Score=73.96 Aligned_cols=102 Identities=17% Similarity=0.240 Sum_probs=64.6
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHh-hCchhHHHHhhhcCCCCCCc-
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFK-ALPDFHRQLRNERGGGSSPS- 128 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~-~l~~~~~~~~~~~~~~~~~~- 128 (366)
..+|+|+|||+|..|+.+...+ .|.-+|+--|.-. ++-...+ .+.. ..+.. ..+
T Consensus 97 G~~VLE~G~GsG~lt~~La~~v---------------gp~G~V~~~d~~~-~~~~~Ar~n~~~-------~~~~~-~~nv 152 (264)
T d1i9ga_ 97 GARVLEAGAGSGALTLSLLRAV---------------GPAGQVISYEQRA-DHAEHARRNVSG-------CYGQP-PDNW 152 (264)
T ss_dssp TCEEEEECCTTSHHHHHHHHHH---------------CTTSEEEEECSCH-HHHHHHHHHHHH-------HHTSC-CTTE
T ss_pred CCEEEecCcCCcHHHHHHHHhh---------------CCCcEEEEecCCH-HHHHHHHHhhhh-------hccCC-CceE
Confidence 5899999999999998754444 2457888888764 3322221 1111 01111 123
Q ss_pred eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
.|.. +++.+.-+|++++|.+|. ++|.+-. + |..
T Consensus 153 ~~~~---~d~~~~~~~~~~fDaV~l--------dlp~P~~---------------------~---------------l~~ 185 (264)
T d1i9ga_ 153 RLVV---SDLADSELPDGSVDRAVL--------DMLAPWE---------------------V---------------LDA 185 (264)
T ss_dssp EEEC---SCGGGCCCCTTCEEEEEE--------ESSCGGG---------------------G---------------HHH
T ss_pred EEEe---cccccccccCCCcceEEE--------ecCCHHH---------------------H---------------HHH
Confidence 3444 577777789999999984 3454321 1 345
Q ss_pred HHHHhccCceEEEEe
Q 017747 209 RSEELVVGGRMVLIL 223 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~ 223 (366)
-++.|||||++++..
T Consensus 186 ~~~~LkpGG~lv~~~ 200 (264)
T d1i9ga_ 186 VSRLLVAGGVLMVYV 200 (264)
T ss_dssp HHHHEEEEEEEEEEE
T ss_pred HHhccCCCCEEEEEe
Confidence 589999999998875
|
| >d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=97.83 E-value=6.3e-05 Score=66.77 Aligned_cols=110 Identities=12% Similarity=0.035 Sum_probs=65.4
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceE
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVY 130 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 130 (366)
-.+|||+|||+|..|..+.+.+ | |.-.||.-|........+-+.. + .. .....
T Consensus 74 G~~VLDlGaGsG~~t~~la~~V------------G---~~G~V~aVD~s~~~l~~a~~~a--------~--~~--~~~~~ 126 (227)
T d1g8aa_ 74 GKSVLYLGIASGTTASHVSDIV------------G---WEGKIFGIEFSPRVLRELVPIV--------E--ER--RNIVP 126 (227)
T ss_dssp TCEEEEETTTSTTHHHHHHHHH------------C---TTSEEEEEESCHHHHHHHHHHH--------S--SC--TTEEE
T ss_pred CCEEEEeccCCCHHHHHHHHHh------------C---CCCEEEEEeCcHHHHHHHHHHH--------H--hc--CCceE
Confidence 4899999999999987643333 2 3478999998754322221111 0 11 11233
Q ss_pred EeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 017747 131 IAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRS 210 (366)
Q Consensus 131 ~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra 210 (366)
+.+..+.-..-..+..++|+++...+.+ . +-..|++.-.
T Consensus 127 i~~d~~~~~~~~~~~~~vD~i~~d~~~~------~-----------------------------------~~~~~l~~~~ 165 (227)
T d1g8aa_ 127 ILGDATKPEEYRALVPKVDVIFEDVAQP------T-----------------------------------QAKILIDNAE 165 (227)
T ss_dssp EECCTTCGGGGTTTCCCEEEEEECCCST------T-----------------------------------HHHHHHHHHH
T ss_pred EEEECCCcccccccccceEEEEEEcccc------c-----------------------------------hHHHHHHHHH
Confidence 4443333333334556899887642211 0 1123566778
Q ss_pred HHhccCceEEEEeecCCC
Q 017747 211 EELVVGGRMVLILLGRIG 228 (366)
Q Consensus 211 ~EL~~GG~lvl~~~g~~~ 228 (366)
+-|+|||+++++...+..
T Consensus 166 ~~LkpgG~lvi~~ka~~~ 183 (227)
T d1g8aa_ 166 VYLKRGGYGMIAVKSRSI 183 (227)
T ss_dssp HHEEEEEEEEEEEEGGGT
T ss_pred HhcccCCeEEEEEECCcc
Confidence 899999999999876643
|
| >d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ribosomal protein L11 methyltransferase PrmA domain: PrmA-like protein TTHA0656 (TT0836) species: Thermus thermophilus [TaxId: 274]
Probab=97.82 E-value=1.9e-06 Score=78.20 Aligned_cols=74 Identities=16% Similarity=0.174 Sum_probs=44.1
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
+..+|+|+|||+|..++. +.+. | .+|+..|.....-....+. ... ++ ....
T Consensus 120 ~g~~VLDiGcGsG~l~i~--------aa~~-----g-----~~V~gvDis~~av~~A~~n-------a~~-n~---~~~~ 170 (254)
T d2nxca1 120 PGDKVLDLGTGSGVLAIA--------AEKL-----G-----GKALGVDIDPMVLPQAEAN-------AKR-NG---VRPR 170 (254)
T ss_dssp TTCEEEEETCTTSHHHHH--------HHHT-----T-----CEEEEEESCGGGHHHHHHH-------HHH-TT---CCCE
T ss_pred ccCEEEEcccchhHHHHH--------HHhc-----C-----CEEEEEECChHHHHHHHHH-------HHH-cC---Ccee
Confidence 357999999999998864 2221 1 5788999865433222211 111 11 2233
Q ss_pred EEeccCCCcccccCCCCcccEEEcccc
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNS 156 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~a 156 (366)
|..+ +. ...+|.+++|+++++..
T Consensus 171 ~~~~---d~-~~~~~~~~fD~V~ani~ 193 (254)
T d2nxca1 171 FLEG---SL-EAALPFGPFDLLVANLY 193 (254)
T ss_dssp EEES---CH-HHHGGGCCEEEEEEECC
T ss_pred EEec---cc-cccccccccchhhhccc
Confidence 4443 44 34578899999998643
|
| >d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.81 E-value=2.1e-05 Score=69.02 Aligned_cols=41 Identities=17% Similarity=0.222 Sum_probs=28.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHH
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSV 106 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~l 106 (366)
+..+|+|+|||+|..+.. |.+. .|+-+|+.-|........+
T Consensus 56 pg~~VLDlGcG~G~~~~~--------la~~--------v~~g~V~gvDis~~~i~~a 96 (209)
T d1nt2a_ 56 GDERVLYLGAASGTTVSH--------LADI--------VDEGIIYAVEYSAKPFEKL 96 (209)
T ss_dssp SSCEEEEETCTTSHHHHH--------HHHH--------TTTSEEEEECCCHHHHHHH
T ss_pred CCCEEEEeCCcCCHHHHH--------HHHh--------ccCCeEEEEeCCHHHHHHH
Confidence 358999999999997764 2222 1336899999977544433
|
| >d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 3, PRMT3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.74 E-value=2.8e-05 Score=71.68 Aligned_cols=106 Identities=14% Similarity=0.079 Sum_probs=63.9
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
+.-+|+|+|||+|..++.+ .+. | + .+|+..|...+. ...+ . .....+. ...+
T Consensus 35 ~~~~VLDiGcG~G~lsl~a--------a~~-----G---a-~~V~aid~s~~~--~~a~------~-~~~~~~~--~~~i 86 (311)
T d2fyta1 35 KDKVVLDVGCGTGILSMFA--------AKA-----G---A-KKVLGVDQSEIL--YQAM------D-IIRLNKL--EDTI 86 (311)
T ss_dssp TTCEEEEETCTTSHHHHHH--------HHT-----T---C-SEEEEEESSTHH--HHHH------H-HHHHTTC--TTTE
T ss_pred CcCEEEEECCCCCHHHHHH--------HHc-----C---C-CEEEEEeCHHHH--HHHH------H-HHHHhCC--Cccc
Confidence 3568999999999988752 221 2 2 589999976431 1111 1 1111121 1233
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
.+ +.++..+--+|++++|+++|....|-+..- ..+..++.+|
T Consensus 87 ~~--~~~~~~~l~~~~~~~D~Ivse~~~~~~~~e------------------------------------~~~~~~~~a~ 128 (311)
T d2fyta1 87 TL--IKGKIEEVHLPVEKVDVIISEWMGYFLLFE------------------------------------SMLDSVLYAK 128 (311)
T ss_dssp EE--EESCTTTSCCSCSCEEEEEECCCBTTBTTT------------------------------------CHHHHHHHHH
T ss_pred eE--EEeeHHHhcCccccceEEEEeeeeeecccc------------------------------------cccHHHHHHH
Confidence 22 224554545789999999987666653320 1234567788
Q ss_pred HHHhccCceEEE
Q 017747 210 SEELVVGGRMVL 221 (366)
Q Consensus 210 a~EL~~GG~lvl 221 (366)
.+-|+|||+++.
T Consensus 129 ~~~Lkp~G~iip 140 (311)
T d2fyta1 129 NKYLAKGGSVYP 140 (311)
T ss_dssp HHHEEEEEEEES
T ss_pred HhcCCCCcEEec
Confidence 899999999973
|
| >d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Precorrin-6Y methyltransferase (CbiT) domain: Precorrin-6Y methyltransferase (CbiT) species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=97.59 E-value=6e-06 Score=70.75 Aligned_cols=76 Identities=18% Similarity=0.157 Sum_probs=46.2
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
.+.-+|+|+|||+|..|+.+ .+ . .-+|+.-|...+.-..+-+.+ . ..|. ..+
T Consensus 32 ~~g~~VLDiGcGsG~~s~~l--------A~--------~--~~~V~avD~~~~~l~~a~~n~-------~-~~gl--~~~ 83 (186)
T d1l3ia_ 32 GKNDVAVDVGCGTGGVTLEL--------AG--------R--VRRVYAIDRNPEAISTTEMNL-------Q-RHGL--GDN 83 (186)
T ss_dssp CTTCEEEEESCTTSHHHHHH--------HT--------T--SSEEEEEESCHHHHHHHHHHH-------H-HTTC--CTT
T ss_pred CCCCEEEEEECCeEcccccc--------cc--------c--ceEEEEecCCHHHHHHHHHHH-------H-HcCC--Ccc
Confidence 34589999999999998742 11 1 147888898654333222211 1 1122 124
Q ss_pred eEEeccCCCcccccCCCCcccEEEcc
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSS 154 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~ 154 (366)
+- .+.|++.+-+++..++|.+++.
T Consensus 84 v~--~~~gda~~~~~~~~~~D~v~~~ 107 (186)
T d1l3ia_ 84 VT--LMEGDAPEALCKIPDIDIAVVG 107 (186)
T ss_dssp EE--EEESCHHHHHTTSCCEEEEEES
T ss_pred eE--EEECchhhcccccCCcCEEEEe
Confidence 32 2236777778888999999865
|
| >d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=97.53 E-value=0.00014 Score=64.33 Aligned_cols=96 Identities=16% Similarity=0.066 Sum_probs=51.4
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
+..+|+|+|||+|+.|..+ .+.+... | ..+...|+.-|.-..-+....+.+.... ... .+ ..++
T Consensus 80 ~g~~VLeIGtGsGY~ta~l--------a~l~g~~-g-~~~~~~V~~iE~~~~l~~~a~~~l~~~~--~~~-~~---~~nv 143 (223)
T d1r18a_ 80 PGARILDVGSGSGYLTACF--------YRYIKAK-G-VDADTRIVGIEHQAELVRRSKANLNTDD--RSM-LD---SGQL 143 (223)
T ss_dssp TTCEEEEESCTTSHHHHHH--------HHHHHHS-C-CCTTCEEEEEESCHHHHHHHHHHHHHHH--HHH-HH---HTSE
T ss_pred CCCeEEEecCCCCHHHHHH--------HHHhhhc-c-CCcccEEEEEecCHHHHHHHHHhhhhcc--hhh-cC---ccEE
Confidence 4589999999999999753 2222111 2 2334677777764321222222221110 000 00 1233
Q ss_pred -EEeccCCCcccccCCCCcccEEEcccccccccCCCCcc
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTL 167 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~ 167 (366)
+.. |+..+-..+.+.+|.++...+++ ++|..+
T Consensus 144 ~~~~---~d~~~~~~~~~~fD~Iiv~~a~~---~~p~~l 176 (223)
T d1r18a_ 144 LIVE---GDGRKGYPPNAPYNAIHVGAAAP---DTPTEL 176 (223)
T ss_dssp EEEE---SCGGGCCGGGCSEEEEEECSCBS---SCCHHH
T ss_pred EEEe---cccccccccccceeeEEEEeech---hchHHH
Confidence 333 46556666777899999998864 566533
|
| >d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Guanidinoacetate methyltransferase domain: Guanidinoacetate methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.52 E-value=7.5e-05 Score=65.74 Aligned_cols=21 Identities=19% Similarity=0.289 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHhccCceEEE
Q 017747 201 DFTLFLRSRSEELVVGGRMVL 221 (366)
Q Consensus 201 D~~~FL~~Ra~EL~~GG~lvl 221 (366)
|...||+.-.+-|||||+|++
T Consensus 141 ~~~~~~~~~~r~LkpGG~~~~ 161 (229)
T d1zx0a1 141 QFNFIKNHAFRLLKPGGVLTY 161 (229)
T ss_dssp HHHHHHHTHHHHEEEEEEEEE
T ss_pred CHHHHHHHHHHHcCCCcEEEE
Confidence 555677888899999999976
|
| >d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Sulfolobus tokodaii [TaxId: 111955]
Probab=97.45 E-value=4.6e-05 Score=67.61 Aligned_cols=19 Identities=21% Similarity=0.251 Sum_probs=16.1
Q ss_pred CCceEEEeecCCCCcchHH
Q 017747 49 PKTINIADLGCSSGPNTLA 67 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~ 67 (366)
....+|+|+|||+|+.|..
T Consensus 69 ~~g~~VLdIG~GsGy~ta~ 87 (224)
T d1vbfa_ 69 HKGQKVLEIGTGIGYYTAL 87 (224)
T ss_dssp CTTCEEEEECCTTSHHHHH
T ss_pred cccceEEEecCCCCHHHHH
Confidence 3458999999999999964
|
| >d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Catalytic, N-terminal domain of histone methyltransferase Dot1l domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.43 E-value=0.00011 Score=70.64 Aligned_cols=40 Identities=10% Similarity=0.036 Sum_probs=28.0
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHH
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSV 106 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~l 106 (366)
..+|+|+|||+|..++.+.... +..+++.-|+..+.-...
T Consensus 217 gd~fLDLGCG~G~~vl~aA~~~----------------g~~~v~GIDiS~~~i~~A 256 (406)
T d1u2za_ 217 GDTFMDLGSGVGNCVVQAALEC----------------GCALSFGCEIMDDASDLT 256 (406)
T ss_dssp TCEEEEESCTTSHHHHHHHHHH----------------CCSEEEEEECCHHHHHHH
T ss_pred CCEEEeCCCCCcHHHHHHHHHc----------------CCCeEEEEeCCHHHHHHH
Confidence 4789999999999987532221 225789999987544433
|
| >d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Catalytic, N-terminal domain of histone methyltransferase Dot1l domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.33 E-value=0.00017 Score=67.15 Aligned_cols=112 Identities=18% Similarity=0.183 Sum_probs=64.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++.+ ... .+...++.-|+..+.....-+.+..+.... +..|.+ ..++
T Consensus 151 ~~~~vlD~GcG~G~~~~~~--------a~~--------~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~-~~~g~~-~~~i 212 (328)
T d1nw3a_ 151 DDDLFVDLGSGVGQVVLQV--------AAA--------TNCKHHYGVEKADIPAKYAETMDREFRKWM-KWYGKK-HAEY 212 (328)
T ss_dssp TTCEEEEETCTTSHHHHHH--------HHH--------CCCSEEEEEECSHHHHHHHHHHHHHHHHHH-HHHTCC-CCCE
T ss_pred CCCEEEEcCCCCCHHHHHH--------HHH--------hCCCeEEEEeCCHHHHHHHHHHHHHHHHHh-hhcccc-CCce
Confidence 4579999999999988642 221 233578999987654333322222111111 111222 2334
Q ss_pred -EEeccCCCcccccCCCCc--ccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRLFPNNS--LHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s--~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
|+. |+|.+--+.++. .|++++++..|| | |+...|
T Consensus 213 ~~~~---gd~~~~~~~~~~~~advi~~~~~~f~----~------------------------------------~~~~~l 249 (328)
T d1nw3a_ 213 TLER---GDFLSEEWRERIANTSVIFVNNFAFG----P------------------------------------EVDHQL 249 (328)
T ss_dssp EEEE---CCTTSHHHHHHHHHCSEEEECCTTTC----H------------------------------------HHHHHH
T ss_pred EEEE---CcccccccccccCcceEEEEcceecc----h------------------------------------HHHHHH
Confidence 444 577554454443 477887766665 2 223345
Q ss_pred HHHHHHhccCceEEEE
Q 017747 207 RSRSEELVVGGRMVLI 222 (366)
Q Consensus 207 ~~Ra~EL~~GG~lvl~ 222 (366)
+...++|||||++|+.
T Consensus 250 ~e~~r~LKpGg~iv~~ 265 (328)
T d1nw3a_ 250 KERFANMKEGGRIVSS 265 (328)
T ss_dssp HHHHTTCCTTCEEEES
T ss_pred HHHHHhCCCCcEEEEe
Confidence 6778899999999874
|
| >d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein TM0748 species: Thermotoga maritima [TaxId: 2336]
Probab=97.32 E-value=0.00013 Score=66.19 Aligned_cols=36 Identities=14% Similarity=0.175 Sum_probs=26.9
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPT 100 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~ 100 (366)
...+|+|+|||+|..|+.+...+ .|.-+|+..|...
T Consensus 103 pG~~VLDiG~GsG~lt~~lA~~~---------------~~~G~V~~vD~~~ 138 (266)
T d1o54a_ 103 EGDRIIDTGVGSGAMCAVLARAV---------------GSSGKVFAYEKRE 138 (266)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHT---------------TTTCEEEEECCCH
T ss_pred CCCEEEECCCCCCHHHHHHHHHh---------------CCCcEEEEEeCCH
Confidence 45899999999999998532222 2447899999865
|
| >d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: N5-glutamine methyltransferase, HemK domain: N5-glutamine methyltransferase, HemK species: Escherichia coli [TaxId: 562]
Probab=97.19 E-value=0.00043 Score=62.93 Aligned_cols=120 Identities=17% Similarity=0.253 Sum_probs=69.3
Q ss_pred CCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCC
Q 017747 48 DPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSP 127 (366)
Q Consensus 48 ~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~ 127 (366)
..++.+|+|+|||+|..++. +... .|..+|+..|....-.+..-+.. +..+ ..
T Consensus 106 ~~~~~~vlDlGtGSG~I~i~--------la~~--------~p~~~v~avDis~~Al~~A~~Na--------~~~~---~~ 158 (274)
T d2b3ta1 106 PEQPCRILDLGTGTGAIALA--------LASE--------RPDCEIIAVDRMPDAVSLAQRNA--------QHLA---IK 158 (274)
T ss_dssp CSSCCEEEEETCTTSHHHHH--------HHHH--------CTTSEEEEECSSHHHHHHHHHHH--------HHHT---CC
T ss_pred cccccceeeeehhhhHHHHH--------HHhh--------CCcceeeeccchhHHHhHHHHHH--------HHhC---cc
Confidence 34578999999999998874 3222 35589999998643222221111 1112 22
Q ss_pred ceEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccc------------cccCCCccccEEEcCCCCHHHHHHHH
Q 017747 128 SVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYN------------EMGESINKGNIYISESSPSAVSKAYF 195 (366)
Q Consensus 128 ~~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~------------~~~~~~nkg~i~~~~~s~~~v~~ay~ 195 (366)
++- .+-+++++. ++.+.+|+++|+ |+-+.. +...+...| ...
T Consensus 159 ~v~--~~~~d~~~~-~~~~~fDlIvsN---------PPYi~~~~~~~~~~v~~~eP~~AL~~g---------~dG----- 212 (274)
T d2b3ta1 159 NIH--ILQSDWFSA-LAGQQFAMIVSN---------PPYIDEQDPHLQQGDVRFEPLTALVAA---------DSG----- 212 (274)
T ss_dssp SEE--EECCSTTGG-GTTCCEEEEEEC---------CCCBCTTCHHHHSSGGGSSCSTTTBCH---------HHH-----
T ss_pred cce--eeecccccc-cCCCceeEEEec---------chhhhhhhhcccccccccchhhhcccc---------ccc-----
Confidence 332 233577765 467899999997 332211 000011100 111
Q ss_pred HHHHHHHHHHHHHHHHHhccCceEEEEe
Q 017747 196 KQFQEDFTLFLRSRSEELVVGGRMVLIL 223 (366)
Q Consensus 196 ~Q~~~D~~~FL~~Ra~EL~~GG~lvl~~ 223 (366)
-..+..+++.=.+-|+|||.+++..
T Consensus 213 ---l~~~~~i~~~a~~~L~~~G~l~lEi 237 (274)
T d2b3ta1 213 ---MADIVHIIEQSRNALVSGGFLLLEH 237 (274)
T ss_dssp ---THHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred ---chHHHHHHHHHHHhcCCCCEEEEEE
Confidence 2345566777778899999999975
|
| >d1af7a2 c.66.1.8 (A:92-284) Chemotaxis receptor methyltransferase CheR, C-terminal domain {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Chemotaxis receptor methyltransferase CheR, C-terminal domain domain: Chemotaxis receptor methyltransferase CheR, C-terminal domain species: Salmonella typhimurium [TaxId: 90371]
Probab=97.19 E-value=0.0012 Score=56.34 Aligned_cols=45 Identities=13% Similarity=0.190 Sum_probs=28.3
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCC
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTN 101 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~N 101 (366)
..+++|.+.|||+|-=.--+.- .+.+.. ......++++..|+..+
T Consensus 23 ~~~lrIwsaGCstGeE~YSlA~----~l~e~~----~~~~~~~~I~atDi~~~ 67 (193)
T d1af7a2 23 HGEYRVWSAAASTGEEPYSIAI----TLADAL----GMAPGRWKVFASDIDTE 67 (193)
T ss_dssp CSCEEEEESCCTTTHHHHHHHH----HHHHHH----CSCTTSEEEEEEESCHH
T ss_pred CCCeEEEEeCCCCchhHHHHHH----HHHHhh----hhcCCceEEEeecCChH
Confidence 5689999999999975432211 122221 11234589999999653
|
| >d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein FLJ20628 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.05 E-value=0.00042 Score=64.52 Aligned_cols=36 Identities=14% Similarity=0.128 Sum_probs=27.1
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPT 100 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~ 100 (366)
...+|+|+|||+|..|+.+...+ .|.-+|+.-|...
T Consensus 98 pG~rVLE~GtGsG~lt~~LAr~v---------------g~~G~V~t~E~~~ 133 (324)
T d2b25a1 98 PGDTVLEAGSGSGGMSLFLSKAV---------------GSQGRVISFEVRK 133 (324)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHH---------------CTTCEEEEEESSH
T ss_pred CCCEEEEecccccHHHHHHHHHh---------------CCCcEEEEecCCH
Confidence 35899999999999998654443 2347888888754
|
| >d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=96.39 E-value=0.0034 Score=54.67 Aligned_cols=85 Identities=19% Similarity=0.225 Sum_probs=45.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
+..+|+|+|||+|+.|..+. .+ + | -+|+.-|.-. .+.. ......++.+. .+..
T Consensus 78 ~g~~VLeIGsGsGY~taila-~l-------~----g-----~~V~~ie~~~----~l~~----~a~~~l~~~g~--~nv~ 130 (215)
T d1jg1a_ 78 PGMNILEVGTGSGWNAALIS-EI-------V----K-----TDVYTIERIP----ELVE----FAKRNLERAGV--KNVH 130 (215)
T ss_dssp TTCCEEEECCTTSHHHHHHH-HH-------H----C-----SCEEEEESCH----HHHH----HHHHHHHHTTC--CSEE
T ss_pred ccceEEEecCCCChhHHHHH-Hh-------h----C-----ceeEEEeccH----HHHH----HHHHHHHHcCC--ceeE
Confidence 45799999999999997422 22 1 1 2344444321 1111 11111111221 2234
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcc
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTL 167 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~ 167 (366)
+.. |+-++-..+.+.+|.++...++.. +|..+
T Consensus 131 ~~~---gd~~~g~~~~~pfD~Iiv~~a~~~---ip~~l 162 (215)
T d1jg1a_ 131 VIL---GDGSKGFPPKAPYDVIIVTAGAPK---IPEPL 162 (215)
T ss_dssp EEE---SCGGGCCGGGCCEEEEEECSBBSS---CCHHH
T ss_pred EEE---CccccCCcccCcceeEEeeccccc---CCHHH
Confidence 554 344555566778999999888864 56544
|
| >d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein TTHA1280, middle and C-terminal domains species: Thermus thermophilus [TaxId: 274]
Probab=96.30 E-value=0.002 Score=59.42 Aligned_cols=118 Identities=10% Similarity=0.029 Sum_probs=69.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
+.-+|+|++||+|..|+.+ ... ..+|+..|....--..+-+ ... .+|. .+.-
T Consensus 145 ~g~rVLDl~~gtG~~s~~~--------a~g----------~~~V~~vD~s~~al~~a~~-------n~~-~ngl--~~~~ 196 (318)
T d1wxxa2 145 RGERALDVFSYAGGFALHL--------ALG----------FREVVAVDSSAEALRRAEE-------NAR-LNGL--GNVR 196 (318)
T ss_dssp CEEEEEEETCTTTHHHHHH--------HHH----------EEEEEEEESCHHHHHHHHH-------HHH-HTTC--TTEE
T ss_pred CCCeeeccCCCCcHHHHHH--------Hhc----------CCcEEeecchHHHHHHHHH-------HHH-HcCC--CCcc
Confidence 3579999999999998742 111 1678899986532222211 111 1222 1123
Q ss_pred EEeccCCCccccc-CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRL-FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 130 f~~~vpgSFy~~l-fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
|+.+-...+.+++ -..+++|+++.. +|..... ... .....+++..++..
T Consensus 197 ~i~~d~~~~~~~~~~~~~~fD~Vi~D--------pP~~~~~-----------------~~~-----~~~~~~~~~~l~~~ 246 (318)
T d1wxxa2 197 VLEANAFDLLRRLEKEGERFDLVVLD--------PPAFAKG-----------------KKD-----VERAYRAYKEVNLR 246 (318)
T ss_dssp EEESCHHHHHHHHHHTTCCEEEEEEC--------CCCSCCS-----------------TTS-----HHHHHHHHHHHHHH
T ss_pred eeeccHHHHhhhhHhhhcCCCEEEEc--------CCccccc-----------------hHH-----HHHHHHHHHHHHHH
Confidence 5554333443444 345689998864 3432211 011 23445677788999
Q ss_pred HHHHhccCceEEEEeec
Q 017747 209 RSEELVVGGRMVLILLG 225 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g 225 (366)
-.+-|+|||.|+++...
T Consensus 247 a~~lLkpGG~Lv~~scs 263 (318)
T d1wxxa2 247 AIKLLKEGGILATASCS 263 (318)
T ss_dssp HHHTEEEEEEEEEEECC
T ss_pred HHHHcCCCCEEEEEeCC
Confidence 99999999999987643
|
| >d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: MraW-like putative methyltransferases domain: TM0872, methyltransferase domain species: Thermotoga maritima [TaxId: 2336]
Probab=95.08 E-value=0.015 Score=49.48 Aligned_cols=26 Identities=35% Similarity=0.597 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHhccCceEEEEeec
Q 017747 200 EDFTLFLRSRSEELVVGGRMVLILLG 225 (366)
Q Consensus 200 ~D~~~FL~~Ra~EL~~GG~lvl~~~g 225 (366)
.....+|..+.+-|+|||+|++..+-
T Consensus 118 ~~~~~~L~~a~~~Lk~gG~l~ii~f~ 143 (192)
T d1m6ya2 118 ENLKEFLKKAEDLLNPGGRIVVISFH 143 (192)
T ss_dssp HHHHHHHHHGGGGEEEEEEEEEEESS
T ss_pred hhHHHHHHHHHHhcCCCCeeeeeccc
Confidence 34567799999999999999987643
|
| >d2f8la1 c.66.1.45 (A:2-329) Hypothetical protein Lmo1582 {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: N-6 DNA Methylase-like domain: Hypothetical protein Lmo1582 species: Listeria monocytogenes [TaxId: 1639]
Probab=94.35 E-value=0.023 Score=51.69 Aligned_cols=129 Identities=12% Similarity=0.090 Sum_probs=67.0
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
....+|+|.|||+|...+.++..+ .+ ...+.++++..|+-..-....... ... .+ ...
T Consensus 116 ~~~~~vlDp~~GsG~~l~~~~~~l----~~-------~~~~~~~~~g~di~~~~~~~a~~~-------~~~-~~---~~~ 173 (328)
T d2f8la1 116 KKNVSILDPACGTANLLTTVINQL----EL-------KGDVDVHASGVDVDDLLISLALVG-------ADL-QR---QKM 173 (328)
T ss_dssp CSEEEEEETTCTTSHHHHHHHHHH----HT-------TSSCEEEEEEEESCHHHHHHHHHH-------HHH-HT---CCC
T ss_pred CCCCEEEeCCCCcchhHHHHHHHH----Hh-------ccCccceEEEecccHHHHHHHHHH-------HHH-hh---hhh
Confidence 456899999999998876544333 11 123458999999743221111100 000 11 112
Q ss_pred eEEeccCCCcccccCCCCcccEEEccc--ccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSN--SLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~--alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
.+.. +++. ...+...+|+++++= ..+|-... ..+......+++ +. -...|+
T Consensus 174 ~~~~---~d~~-~~~~~~~fD~vi~NPPy~~~~~~~~----~~~~~~~~~~~~------~~-------------~~~~Fi 226 (328)
T d2f8la1 174 TLLH---QDGL-ANLLVDPVDVVISDLPVGYYPDDEN----AKTFELCREEGH------SF-------------AHFLFI 226 (328)
T ss_dssp EEEE---SCTT-SCCCCCCEEEEEEECCCSEESCHHH----HTTSTTCCSSSC------EE-------------HHHHHH
T ss_pred hhhc---cccc-cccccccccccccCCCCCCCccchh----hhhcchhcccCc------ch-------------HHHHHH
Confidence 2222 2332 335777899998872 22221110 000000001111 00 123578
Q ss_pred HHHHHHhccCceEEEEeecC
Q 017747 207 RSRSEELVVGGRMVLILLGR 226 (366)
Q Consensus 207 ~~Ra~EL~~GG~lvl~~~g~ 226 (366)
..-.+-|+|||++++.++..
T Consensus 227 ~~~~~~Lk~~G~~~~I~p~~ 246 (328)
T d2f8la1 227 EQGMRYTKPGGYLFFLVPDA 246 (328)
T ss_dssp HHHHHTEEEEEEEEEEEEGG
T ss_pred HHHHHhcCCCCceEEEecCc
Confidence 88889999999999998754
|
| >d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein PH1915, middle and C-terminal domains species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=94.18 E-value=0.091 Score=47.83 Aligned_cols=117 Identities=11% Similarity=0.076 Sum_probs=66.3
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceE
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVY 130 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 130 (366)
..+|+|+|||+|..|+.+ . .. | + -+|+..|+...--... ..... .+|.. ....|
T Consensus 146 g~~VLDl~~g~G~~si~~-------a-~~-----g---a-~~V~~vD~s~~al~~a-------~~N~~-~ngl~-~~~~~ 199 (324)
T d2as0a2 146 GDRVLDVFTYTGGFAIHA-------A-IA-----G---A-DEVIGIDKSPRAIETA-------KENAK-LNGVE-DRMKF 199 (324)
T ss_dssp TCEEEETTCTTTHHHHHH-------H-HT-----T---C-SEEEEEESCHHHHHHH-------HHHHH-HTTCG-GGEEE
T ss_pred CCeeecccCcccchhhhh-------h-hc-----C---C-cEEEeecCCHHHHHHH-------HHHHH-HcCCC-cccee
Confidence 579999999999999742 1 11 1 2 5799999864211111 11111 11221 11124
Q ss_pred EeccCCCcccc---c-CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 131 IAGYPGSFYGR---L-FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 131 ~~~vpgSFy~~---l-fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
+. ++.++- + ...+++|++++. +|..... ... .....+++..++
T Consensus 200 ~~---~d~~~~~~~~~~~~~~fD~Vi~D--------pP~~~~~-----------------~~~-----~~~~~~~y~~l~ 246 (324)
T d2as0a2 200 IV---GSAFEEMEKLQKKGEKFDIVVLD--------PPAFVQH-----------------EKD-----LKAGLRAYFNVN 246 (324)
T ss_dssp EE---SCHHHHHHHHHHTTCCEEEEEEC--------CCCSCSS-----------------GGG-----HHHHHHHHHHHH
T ss_pred ee---chhhhhhHHHHhccCCCCchhcC--------CccccCC-----------------HHH-----HHHHHHHHHHHH
Confidence 44 344432 2 245688988864 3432211 001 133456777888
Q ss_pred HHHHHHhccCceEEEEeecC
Q 017747 207 RSRSEELVVGGRMVLILLGR 226 (366)
Q Consensus 207 ~~Ra~EL~~GG~lvl~~~g~ 226 (366)
..-.+-|+|||+|+++....
T Consensus 247 ~~a~~ll~pGG~lv~~s~s~ 266 (324)
T d2as0a2 247 FAGLNLVKDGGILVTCSCSQ 266 (324)
T ss_dssp HHHHTTEEEEEEEEEEECCT
T ss_pred HHHHHHcCCCcEEEEEeCCc
Confidence 88899999999999987444
|
| >d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: N5-glutamine methyltransferase, HemK domain: N5-glutamine methyltransferase, HemK species: Thermotoga maritima [TaxId: 2336]
Probab=93.88 E-value=0.12 Score=46.14 Aligned_cols=75 Identities=20% Similarity=0.299 Sum_probs=43.5
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceE
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVY 130 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 130 (366)
..+|+|+|||+|.-++. +.+ .|..+|++.|....-....-+. . +.++. ...++
T Consensus 111 ~~~vld~g~GsG~i~~~--------la~---------~~~~~v~a~Dis~~Al~~A~~N-------a-~~~~~--~~~~~ 163 (271)
T d1nv8a_ 111 IKTVADIGTGSGAIGVS--------VAK---------FSDAIVFATDVSSKAVEIARKN-------A-ERHGV--SDRFF 163 (271)
T ss_dssp CCEEEEESCTTSHHHHH--------HHH---------HSSCEEEEEESCHHHHHHHHHH-------H-HHTTC--TTSEE
T ss_pred ccEEEEeeeeeehhhhh--------hhh---------cccceeeechhhhhHHHHHHHH-------H-HHcCC--CceeE
Confidence 56899999999997653 222 1348899999865322222111 1 11122 22444
Q ss_pred EeccCCCcccccC-CCCcccEEEcc
Q 017747 131 IAGYPGSFYGRLF-PNNSLHFIHSS 154 (366)
Q Consensus 131 ~~~vpgSFy~~lf-p~~s~~~~~S~ 154 (366)
+.. +++++.+. ..+.+|+++|+
T Consensus 164 i~~--~~~~~~~~~~~~~fDlIVsN 186 (271)
T d1nv8a_ 164 VRK--GEFLEPFKEKFASIEMILSN 186 (271)
T ss_dssp EEE--SSTTGGGGGGTTTCCEEEEC
T ss_pred Eee--cccccccccccCcccEEEEc
Confidence 432 56666543 23689999997
|
| >d2ih2a1 c.66.1.27 (A:21-243) DNA methylase TaqI, N-terminal domain {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: DNA methylase TaqI, N-terminal domain domain: DNA methylase TaqI, N-terminal domain species: Thermus aquaticus [TaxId: 271]
Probab=93.45 E-value=0.2 Score=41.76 Aligned_cols=24 Identities=25% Similarity=0.463 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHhccCceEEEEeec
Q 017747 202 FTLFLRSRSEELVVGGRMVLILLG 225 (366)
Q Consensus 202 ~~~FL~~Ra~EL~~GG~lvl~~~g 225 (366)
...|+..-.+-|++||++++.++.
T Consensus 123 ~~~Fi~~al~~lk~~G~~~~I~p~ 146 (223)
T d2ih2a1 123 YGAFLEKAVRLLKPGGVLVFVVPA 146 (223)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred HHHHHHHHHHhcccCCceEEEEee
Confidence 356778888889999999999864
|
| >d2h00a1 c.66.1.54 (A:5-254) Methyltransferase 10 domain containing protein METT10D {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Methyltransferase 10 domain domain: Methyltransferase 10 domain containing protein METT10D species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.36 E-value=0.068 Score=46.96 Aligned_cols=80 Identities=11% Similarity=0.041 Sum_probs=46.9
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
.+..+|+|+|||+|..++.+.... |..+++..|....-.+..-+.+. .++. ...
T Consensus 60 ~~~~~~LDiGtGsg~I~~~l~~~~----------------~~~~~~~~Di~~~al~~A~~N~~--------~n~l--~~~ 113 (250)
T d2h00a1 60 STLRRGIDIGTGASCIYPLLGATL----------------NGWYFLATEVDDMCFNYAKKNVE--------QNNL--SDL 113 (250)
T ss_dssp CCCCEEEEESCTTTTHHHHHHHHH----------------HCCEEEEEESCHHHHHHHHHHHH--------HTTC--TTT
T ss_pred cccceEEEeCCCchHHHHHHHHhC----------------CCccccceecCHHHHHHHHHHHH--------HhCC--Ccc
Confidence 346899999999999988642222 34899999996543332222211 1121 123
Q ss_pred eEE--eccCCCcccccC--CCCcccEEEcc
Q 017747 129 VYI--AGYPGSFYGRLF--PNNSLHFIHSS 154 (366)
Q Consensus 129 ~f~--~~vpgSFy~~lf--p~~s~~~~~S~ 154 (366)
+.+ ......++..++ ..+++|+++|+
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~fD~ivsN 143 (250)
T d2h00a1 114 IKVVKVPQKTLLMDALKEESEIIYDFCMCN 143 (250)
T ss_dssp EEEEECCTTCSSTTTSTTCCSCCBSEEEEC
T ss_pred eeeeeeccHHhhhhhhhhcccCceeEEEec
Confidence 332 223445555553 45679999996
|
| >d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Met-10+ protein-like domain: Hypothetical protein PH0793 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=92.67 E-value=0.094 Score=46.35 Aligned_cols=74 Identities=11% Similarity=0.003 Sum_probs=42.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|+.|+.+ .++ | ..+|+..|+-.+-+..+-+.+ .. ++. .+.+
T Consensus 107 ~g~~VlD~~aG~G~~~l~~--------a~~-----~----~~~V~avd~n~~a~~~~~~N~-------~~-n~l--~~~v 159 (260)
T d2frna1 107 PDELVVDMFAGIGHLSLPI--------AVY-----G----KAKVIAIEKDPYTFKFLVENI-------HL-NKV--EDRM 159 (260)
T ss_dssp TTCEEEETTCTTTTTHHHH--------HHH-----T----CCEEEEECCCHHHHHHHHHHH-------HH-TTC--TTTE
T ss_pred CccEEEECcceEcHHHHHH--------HHh-----C----CcEEEEecCCHHHHHHHHHHH-------HH-hCC--CceE
Confidence 4589999999999999852 221 1 158999999654333332222 11 122 1233
Q ss_pred EEeccCCCcccccCCCCcccEEEc
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHS 153 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S 153 (366)
-+ +-|+.. .+.+.+.+|.++.
T Consensus 160 ~~--~~~D~~-~~~~~~~~D~Ii~ 180 (260)
T d2frna1 160 SA--YNMDNR-DFPGENIADRILM 180 (260)
T ss_dssp EE--ECSCTT-TCCCCSCEEEEEE
T ss_pred EE--EEcchH-HhccCCCCCEEEE
Confidence 22 224542 3456677887764
|
| >d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Putative methyltransferase Atu0340 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=91.17 E-value=0.59 Score=42.13 Aligned_cols=122 Identities=13% Similarity=0.144 Sum_probs=65.7
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
.+..+|+|++|++|..|+.+ . .. | .+|++.|....--..+-+ .... ++.. ..+
T Consensus 131 ~~~~rVLdlf~~tG~~sl~a-------a-~~-----G-----A~V~~VD~s~~al~~a~~-------N~~l-n~~~-~~~ 183 (309)
T d2igta1 131 DRPLKVLNLFGYTGVASLVA-------A-AA-----G-----AEVTHVDASKKAIGWAKE-------NQVL-AGLE-QAP 183 (309)
T ss_dssp SSCCEEEEETCTTCHHHHHH-------H-HT-----T-----CEEEEECSCHHHHHHHHH-------HHHH-HTCT-TSC
T ss_pred cCCCeEEEecCCCcHHHHHH-------H-hC-----C-----CeEEEEeChHHHHHHHHH-------hhhh-hccc-CCc
Confidence 35689999999999998752 1 10 1 578999986432221111 1111 1221 123
Q ss_pred e-EEeccCCCccccc-CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYGRL-FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 129 ~-f~~~vpgSFy~~l-fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
+ |+.+---.|..+. ...+.+|+|+.- |+.+... .|+.++ . .+.|+...+
T Consensus 184 ~~~i~~D~~~~l~~~~~~~~~fD~IilD---------PP~f~~~-----~~~~~~--------~-------~~~~~~~l~ 234 (309)
T d2igta1 184 IRWICEDAMKFIQREERRGSTYDIILTD---------PPKFGRG-----THGEVW--------Q-------LFDHLPLML 234 (309)
T ss_dssp EEEECSCHHHHHHHHHHHTCCBSEEEEC---------CCSEEEC-----TTCCEE--------E-------HHHHHHHHH
T ss_pred EEEEeCCHHHhHHHHhhcCCCCCEEEEC---------CCccccc-----ccchhH--------H-------HHHHHHHHH
Confidence 3 5554333333343 345678888763 4333210 122222 1 234455666
Q ss_pred HHHHHHhccCceEEEEeecC
Q 017747 207 RSRSEELVVGGRMVLILLGR 226 (366)
Q Consensus 207 ~~Ra~EL~~GG~lvl~~~g~ 226 (366)
....+=|+|||.+++.+...
T Consensus 235 ~~~~~ll~~~g~~ll~t~~s 254 (309)
T d2igta1 235 DICREILSPKALGLVLTAYS 254 (309)
T ss_dssp HHHHHTBCTTCCEEEEEECC
T ss_pred HHHHHhcCCCCCEEEEecCC
Confidence 67777888999877776543
|
| >d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Methyltransferase TTHA0928 species: Thermus thermophilus [TaxId: 274]
Probab=91.10 E-value=0.085 Score=43.46 Aligned_cols=31 Identities=23% Similarity=0.079 Sum_probs=19.7
Q ss_pred HHHHHHhhhhcCCCceEEEeecCCCCcchHH
Q 017747 37 LEALQQLYLEIDPKTINIADLGCSSGPNTLA 67 (366)
Q Consensus 37 ~~ai~~l~~~~~~~~~~IaDlGCs~G~ns~~ 67 (366)
.+++-++.....++.-+|+|+|||+|..++.
T Consensus 28 ~e~lf~~l~~~~~~g~~vLDl~~G~G~~~i~ 58 (171)
T d1ws6a1 28 RKALFDYLRLRYPRRGRFLDPFAGSGAVGLE 58 (171)
T ss_dssp HHHHHHHHHHHCTTCCEEEEETCSSCHHHHH
T ss_pred HHHHHHHhhccccCCCeEEEeccccchhhhh
Confidence 3343333332234557999999999988763
|
| >d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein SMu776, middle and C-terminal domains species: Streptococcus mutans [TaxId: 1309]
Probab=88.72 E-value=0.28 Score=44.36 Aligned_cols=120 Identities=13% Similarity=0.104 Sum_probs=65.1
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc-
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS- 128 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~- 128 (366)
..-+|+|+.|++|..|+.. . .. | . ..|+..|+...--..+- ..... ++.. ..+
T Consensus 144 ~g~~VLdlf~~~G~~sl~a-------a-~~-----g---a-~~V~~vD~s~~a~~~a~-------~N~~~-n~l~-~~~~ 197 (317)
T d2b78a2 144 AGKTVLNLFSYTAAFSVAA-------A-MG-----G---A-MATTSVDLAKRSRALSL-------AHFEA-NHLD-MANH 197 (317)
T ss_dssp BTCEEEEETCTTTHHHHHH-------H-HT-----T---B-SEEEEEESCTTHHHHHH-------HHHHH-TTCC-CTTE
T ss_pred CCCceeecCCCCcHHHHHH-------H-hC-----C---C-ceEEEecCCHHHHHHHH-------HHHHH-hccc-Ccce
Confidence 3579999999999998641 1 10 1 1 57888898653222111 11111 1211 122
Q ss_pred eEEeccCCCcccccCC-CCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFP-NNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp-~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
-|+.+.--++.+++-. .+.+|+++.- |+.+.. +|..+ ....+|+...++
T Consensus 198 ~~i~~d~~~~l~~~~~~~~~fD~Ii~D---------PP~f~~------~~~~~---------------~~~~~~~~~L~~ 247 (317)
T d2b78a2 198 QLVVMDVFDYFKYARRHHLTYDIIIID---------PPSFAR------NKKEV---------------FSVSKDYHKLIR 247 (317)
T ss_dssp EEEESCHHHHHHHHHHTTCCEEEEEEC---------CCCC-----------CC---------------CCHHHHHHHHHH
T ss_pred EEEEccHHHHHHHHHhhcCCCCEEEEc---------Chhhcc------chhHH---------------HHHHHHHHHHHH
Confidence 3555433233334432 3478888764 443321 11111 123566777788
Q ss_pred HHHHHhccCceEEEEeec
Q 017747 208 SRSEELVVGGRMVLILLG 225 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~g 225 (366)
.-.+-|+|||.|+++...
T Consensus 248 ~a~~ll~pgG~l~~~scs 265 (317)
T d2b78a2 248 QGLEILSENGLIIASTNA 265 (317)
T ss_dssp HHHHTEEEEEEEEEEECC
T ss_pred HHHHHcCCCCEEEEEeCC
Confidence 888899999999998743
|
| >d1yuba_ c.66.1.24 (A:) rRNA adenine dimethylase {Streptococcus pneumoniae, Ermam [TaxId: 1313]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: rRNA adenine dimethylase-like domain: rRNA adenine dimethylase species: Streptococcus pneumoniae, Ermam [TaxId: 1313]
Probab=88.29 E-value=0.42 Score=41.64 Aligned_cols=78 Identities=18% Similarity=0.117 Sum_probs=44.5
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
..-+|+|+|||+|..|.. |.++ + .+|+.-|+-..-...+-+..+. .+++
T Consensus 29 ~~d~VLEIGpG~G~LT~~--------L~~~-----~-----~~v~aIE~D~~l~~~l~~~~~~-------------~~n~ 77 (245)
T d1yuba_ 29 ETDTVYEIGTGKGHLTTK--------LAKI-----S-----KQVTSIELDSHLFNLSSEKLKL-------------NTRV 77 (245)
T ss_dssp SSEEEEECSCCCSSCSHH--------HHHH-----S-----SEEEESSSSCSSSSSSSCTTTT-------------CSEE
T ss_pred CCCeEEEECCCccHHHHH--------HHhh-----c-----CceeEeeecccchhhhhhhhhh-------------ccch
Confidence 468899999999999975 3232 1 4677777755433322222110 1232
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccc
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWL 160 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWl 160 (366)
..+-+++..-=+|+...+.++|+.-.|+-
T Consensus 78 --~ii~~D~l~~~~~~~~~~~vv~NLPY~Is 106 (245)
T d1yuba_ 78 --TLIHQDILQFQFPNKQRYKIVGNIPYHLS 106 (245)
T ss_dssp --EECCSCCTTTTCCCSSEEEEEEECCSSSC
T ss_pred --hhhhhhhhccccccceeeeEeeeeehhhh
Confidence 12235665444666666667777665553
|
| >d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ta1320-like domain: Hypothetical protein Ta1320 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=88.26 E-value=0.2 Score=42.38 Aligned_cols=18 Identities=17% Similarity=0.189 Sum_probs=14.8
Q ss_pred CceEEEeecCCCCcchHH
Q 017747 50 KTINIADLGCSSGPNTLA 67 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~ 67 (366)
..-+|+|+|||+|..++.
T Consensus 48 ~Gk~VLDlGcGtG~l~i~ 65 (197)
T d1ne2a_ 48 GGRSVIDAGTGNGILACG 65 (197)
T ss_dssp BTSEEEEETCTTCHHHHH
T ss_pred CCCEEEEeCCCCcHHHHH
Confidence 347999999999988753
|
| >d1qama_ c.66.1.24 (A:) rRNA adenine dimethylase {Bacillus subtilis, Ermc' [TaxId: 1423]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: rRNA adenine dimethylase-like domain: rRNA adenine dimethylase species: Bacillus subtilis, Ermc' [TaxId: 1423]
Probab=87.86 E-value=0.47 Score=41.00 Aligned_cols=22 Identities=27% Similarity=0.466 Sum_probs=18.0
Q ss_pred CCceEEEeecCCCCcchHHHHH
Q 017747 49 PKTINIADLGCSSGPNTLAIIK 70 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~ 70 (366)
.+.-+|+|+|||+|..|..+++
T Consensus 20 ~~~d~VlEIGpG~G~LT~~Ll~ 41 (235)
T d1qama_ 20 NEHDNIFEIGSGKGHFTLELVQ 41 (235)
T ss_dssp CTTCEEEEECCTTSHHHHHHHH
T ss_pred CCCCeEEEECCCchHHHHHHHh
Confidence 3568899999999999986543
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| >d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ta1320-like domain: Hypothetical protein PH1948 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=86.83 E-value=0.13 Score=43.49 Aligned_cols=35 Identities=14% Similarity=0.227 Sum_probs=24.4
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTN 101 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~N 101 (366)
+..+|+|+|||+|..++.+ + .+ .+ ..|+..|.-..
T Consensus 46 ~g~~vLDlg~GtG~l~i~a-------~-~~--------g~-~~v~~vdi~~~ 80 (201)
T d1wy7a1 46 EGKVVADLGAGTGVLSYGA-------L-LL--------GA-KEVICVEVDKE 80 (201)
T ss_dssp TTCEEEEETCTTCHHHHHH-------H-HT--------TC-SEEEEEESCHH
T ss_pred CCCEEEECcCcchHHHHHH-------H-Hc--------CC-CEEEEEcCcHH
Confidence 3468999999999987642 1 11 12 68899998643
|
| >d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Thermus thermophilus [TaxId: 274]
Probab=86.13 E-value=0.79 Score=41.18 Aligned_cols=121 Identities=15% Similarity=0.170 Sum_probs=65.0
Q ss_pred CCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCC
Q 017747 48 DPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSP 127 (366)
Q Consensus 48 ~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~ 127 (366)
.+++-+|+.+|.|.|..... +.+ -.|..+|...|+-..-....-+-++.......+ .+
T Consensus 75 ~~~pk~VLiiG~G~G~~~~~--------ll~--------~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~------d~ 132 (312)
T d1uira_ 75 HPEPKRVLIVGGGEGATLRE--------VLK--------HPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFD------DP 132 (312)
T ss_dssp SSCCCEEEEEECTTSHHHHH--------HTT--------STTCCEEEEEESCHHHHHHHHHHCHHHHTTGGG------CT
T ss_pred CCCcceEEEeCCCchHHHHH--------HHh--------cCCcceEEEecCCHHHHHHHHhcCcccccCccC------CC
Confidence 36789999999999986542 111 133357777777543222222223221111100 12
Q ss_pred ce-EEeccCCCcccccCCCCcccEEEcccccccccCCCC-cccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 017747 128 SV-YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPP-TLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLF 205 (366)
Q Consensus 128 ~~-f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~-~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~F 205 (366)
++ .+.+-+..|-.+ .++.+|+++.-.+=.|....|. .+.. ..|
T Consensus 133 rv~i~~~Da~~~l~~--~~~~yDvIi~D~~dp~~~~~~~~~L~t---------------------------------~eF 177 (312)
T d1uira_ 133 RAVLVIDDARAYLER--TEERYDVVIIDLTDPVGEDNPARLLYT---------------------------------VEF 177 (312)
T ss_dssp TEEEEESCHHHHHHH--CCCCEEEEEEECCCCBSTTCGGGGGSS---------------------------------HHH
T ss_pred ceEEEEchHHHHhhh--cCCcccEEEEeCCCcccccchhhhhhh---------------------------------HHH
Confidence 22 333333344333 4567999986654334333222 1211 246
Q ss_pred HHHHHHHhccCceEEEEeec
Q 017747 206 LRSRSEELVVGGRMVLILLG 225 (366)
Q Consensus 206 L~~Ra~EL~~GG~lvl~~~g 225 (366)
++...+-|+|||.+++...+
T Consensus 178 ~~~~~~~L~p~Gvlv~~~~s 197 (312)
T d1uira_ 178 YRLVKAHLNPGGVMGMQTGM 197 (312)
T ss_dssp HHHHHHTEEEEEEEEEEEEE
T ss_pred HHHHHHhcCCCceEEEecCC
Confidence 67788999999999987643
|
| >d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Putative methyltransferase SPy1538 species: Streptococcus pyogenes [TaxId: 1314]
Probab=85.35 E-value=0.25 Score=39.51 Aligned_cols=35 Identities=17% Similarity=0.037 Sum_probs=24.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTN 101 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~N 101 (366)
+.-+|+|+|||+|..++. ++.+ | + -+|++.|.-.+
T Consensus 14 ~g~~vlDl~~GtG~~~ie-------a~~r------g---a-~~v~~ve~~~~ 48 (152)
T d2esra1 14 NGGRVLDLFAGSGGLAIE-------AVSR------G---M-SAAVLVEKNRK 48 (152)
T ss_dssp CSCEEEEETCTTCHHHHH-------HHHT------T---C-CEEEEECCCHH
T ss_pred CCCeEEEcCCccCHHHHH-------HHHh------C---c-ceeeeehhchh
Confidence 357899999999998863 2211 2 2 58999998543
|