Citrus Sinensis ID: 017752

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360------
Protein Sequence
MATASFSNLPTRAFSPSYHNCHQSFVIKNITRQIPNPHLINFSLTCTSSTPNKNKTCRPTVIFASGGGKGGGGSWGSGGGGGGGDDDAGFHNCTEAIFALAKAGRTLGDLPKDLAGAIEAGRVPAAIVKRYLELEKSPVFRWLLNFGGFRERLLADDLFLAKVAMECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLPAPTISLRPPLAMSTGPIAKFFFNCPDNAFQRIGAIVRNGAKLFAVGTSASLVGVGITNALINARKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHENKIILAAICFAFRTGNTFLGSLMWVDYARWVGIQKMRE
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccEEEEcccccccccccccccccccccccccccEEccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccHHHHHHHHHcccccHHHHHHHHHcccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
ccEEEccccccccccccccccccccEEEEEEEEccccccccEEEEEEcccccccccEEEEEEEcccccccccccEcccccccccccccccccHHHHHHHHHHHcccHHHccHHHHHHHHcccccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHccccccc
Coil and Loop (DISEMBL)
matasfsnlptrafspsyhnchqSFVIKNitrqipnphlinfsltctsstpnknktcrptvifasgggkggggswgsgggggggdddagfhNCTEAIFALAKAGRTLGDLPKDLAGAIEAGRVPAAIVKRYLELEKSPVFRWLLNFGGFRERLLADDLFLAKVAMECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVwlpaptislrpplamstgpiakfffncpdnAFQRIGAIVRNGAKLFAVGTSASLVGVGITNALINARKALdtsfageaedvpiiSTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHENKIILAAICFAFRtgntflgslMWVDYARWVGIQKMRE
Flexible Loop (DISEMBL)
matasfsnlptrafspsyHNCHQSFVIKNITRQIPNPHLINFSLTCTSSTPNKNKTCRPTVIFasgggkggggSWGSGGGGGGGDDDAGFHNCTEAIFALAKAGRTLGDLPKDLAGAIEAGRVPAAIVKRYLELEKSPVFRWLLNFGGFRERLLADDLFLAKVAMECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLPAPTISLRPPLAMSTGPIAKFFFNCPDNAFQRIGAIVRNGAKLFAVGTSASLVGVGITNALINARKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHENKIILAAICFAFRTGNTFLGSLMWVDYARWVGIQKMRE
Low Complexity Region (SEG)
MATASFSNLPTRAFSPSYHNCHQSFVIKNITRQIPNPHLINFSLTCTSSTPNKNKTCRPTVIFAsgggkggggswgsgggggggdddagFHNCTEAIFALAKAGRTLGDLPKDLAGAIEAGRVPAAIVKRYLELEKSPVFRWLLNFGGFRERLLADDLFLAKVAMECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLPAPTISLRPPLAMSTGPIAKFFFNCPDNAFQRIGAIVRNGAKLFAVGTSASLVGVGITNALINARKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHENKIILAAICFAFRTGNTFLGSLMWVDYARWVGIQKMRE
Disordered region (IsUnstruct)
***************PSYHNCHQSFVIKNITRQIPNPHLINFSLTCTS********CRPTVIF**************************FHNCTEAIFALAKAGRTLGDLPKDLAGAIEAGRVPAAIVKRYLELEKSPVFRWLLNFGGFRERLLADDLFLAKVAMECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLPAPTISLRPPLAMSTGPIAKFFFNCPDNAFQRIGAIVRNGAKLFAVGTSASLVGVGITNALINARKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHENKIILAAICFAFRTGNTFLGSLMWVDYARWVGI*****
Disordered Region (DISOPRED)
******************************TRQIPNPHLI*****************************************************TEAIFALAKAGRTLGDLPKDLAGAIEAGRVPAAIVKRYLELEKSPVFRWLLNFGGFRERLLADDLFLAKVAMECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLPAPT***************KFFFNCPDNAFQRIGAIVRNGAKLFAVGTSASLVGVGITNALINA***************PIISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHENKIILAAICFAFRTGNTFLGSLMWVDYARWVGIQ****
Disordered Region (DISEMBL)
MATASFSNLPTRAFSPSYHNCHQSFVIKNITRQIPNPHLINFSLTCTSSTPNKNKTCRPTVIFASGGGKGGGGSWGSGGGGGGGDDDAGFHNCTEAIFALAKAGRTLGDLPKDLAGAIEAGRVPAAIVKRYLELEKSPVFRWLLNFGGFRERLLADDLFLAKVAMECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLPAPTISLRPPLAMSTGPIAKFFFNCPDNAFQRIGAIVRNGAKLFAVGTSASLVGVGITNALINARKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHENKIILAAICFAFRTGNTFLGSLMWVDYARWVGIQKMRE
Disordered Region (DISPRO)
*ATASFSNLPTRAFSPSYHNCHQSFVIKNITRQIPNPHLINFSLTCTSSTPNKNKTCRPTVIFASGG*K******************AGFHNCTEAIFALAKAGRTLGDLPKDLAGAIEAGRVPAAIVKRYLELEKSPVFRWLLNFGGFRERLLADDLFLAKVAMECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLPAPTISLRPPLAMSTGPIAKFFFNCPDNAFQRIGAIVRNGAKLFAVGTSASLVGVGITNALINARKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHENKIILAAICFAFRTGNTFLGSLMWVDYARWVGIQ****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MATASFSNLPTRAFSPSYHNCHQSFVIKNITRQIPNPHLINFSLTCTSSTPNKNKTCRPTVIFASGGGKGGGGSWGSGGGGGGGDDDAGFHNCTEAIFALAKAGRTLGDLPKDLAGAIEAGRVPAAIVKRYLELEKSPVFRWLLNFGGFRERLLADDLFLAKVAMECGVGVFTKTxxxxxxxxxxxxxxxxxxxxxVVMAIIADFMLVWLPAPTISLRPPLAMSTGPIAKFFFNCPDNAFQRIGAIVRNGAKLFAVGTSASLVGVGITNALINARKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHENKIILAAICFAFRTGNTFLGSLMWVDYARWVGIQKMRE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	366
224059600	382	predicted protein [Populus trichocarpa]	0.991	0.950	0.701	1e-137
255553448	388	conserved hypothetical protein [Ricinus	0.989	0.932	0.678	1e-135
225450009	380	PREDICTED: uncharacterized protein LOC10	0.989	0.952	0.708	1e-134
356542804	372	PREDICTED: uncharacterized protein LOC10	0.754	0.741	0.781	1e-128
356531649	376	PREDICTED: uncharacterized protein LOC10	0.754	0.734	0.784	1e-127
225435391	384	PREDICTED: uncharacterized protein LOC10	0.754	0.718	0.75	1e-125
125552186	297	hypothetical protein OsI_19813 [Oryza sa	0.751	0.925	0.738	1e-122
115463661	378	Os05g0388600 [Oryza sativa Japonica Grou	0.740	0.716	0.745	1e-121
413945208	387	hypothetical protein ZEAMMB73_229307 [Ze	0.740	0.700	0.731	1e-121
226529786	387	uncharacterized protein LOC100276525 [Ze	0.740	0.700	0.731	1e-121

>gi|224059600|ref|XP_002299927.1| predicted protein [Populus trichocarpa] gi|222847185|gb|EEE84732.1| predicted protein [Populus trichocarpa]

 Score =  493 bits (1270), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 270/385 (70%), Positives = 302/385 (78%), Gaps = 22/385 (5%)

Query: 1   MATASFSNLPTRAFS---PSYHNCHQSFVIKNITRQIP----NPHLINFSLTCTSSTPNK 53
           MA A+FS   TRAFS   P+YH+ + S     I+  +P     P     S T T+S   +
Sbjct: 1   MAFATFS---TRAFSLQSPNYHHQYHSNNFATISLCVPIPTSKPSATPLSWTTTTSRFKR 57

Query: 54  NKTCRPTVIFASGGGKGGGGSWGSGGGGGGGDDDAGFHNCTEAIFALAKAGRTLGDLPKD 113
            +T          GG GGGG  G GGGG     DAG  N +EAI ALA+ GR+L  LPKD
Sbjct: 58  FRTTIALSSGGGDGGVGGGGISGGGGGGNDDGGDAGSRNKSEAILALAEVGRSLESLPKD 117

Query: 114 LAGAIEAGRVPAAIVKRYLELEKSPVFRWLLNFGGFRERLLADDLFLAKVAMECGVGVFT 173
           LA AIEAGRVP +IV RY ELEKS VFRWLL FGGF+ERLLADDLFL KVA+ECGVG+FT
Sbjct: 118 LAAAIEAGRVPGSIVSRYFELEKSAVFRWLLQFGGFKERLLADDLFLTKVAIECGVGIFT 177

Query: 174 KTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLPAPTISLRPPLAMSTGPIAKFFF 233
           KTAAELERRRENF+KELDFVFADVVMAIIADFMLVWLPAPT+SLRPPLA+S GP++KFF+
Sbjct: 178 KTAAELERRRENFTKELDFVFADVVMAIIADFMLVWLPAPTVSLRPPLALSAGPVSKFFY 237

Query: 234 NCPDNAF------------QRIGAIVRNGAKLFAVGTSASLVGVGITNALINARKALDTS 281
           +CPDNAF            QRIGAI+RNGAKLFAVGT ASLVGVGITNALINARKALD S
Sbjct: 238 SCPDNAFQVALAGTSYSFLQRIGAILRNGAKLFAVGTGASLVGVGITNALINARKALDKS 297

Query: 282 FAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHENKIILAAICFAFR 341
           FAGEAEDVPI+STSVAYGVYMAVSSNLRYQ+LAGVIEQR+LEP+LH+ K+IL+AICF  R
Sbjct: 298 FAGEAEDVPILSTSVAYGVYMAVSSNLRYQILAGVIEQRLLEPMLHQQKVILSAICFVVR 357

Query: 342 TGNTFLGSLMWVDYARWVGIQKMRE 366
           TGNTFLGSLMWVDYARWVGIQK+RE
Sbjct: 358 TGNTFLGSLMWVDYARWVGIQKIRE 382

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255553448|ref|XP_002517765.1| conserved hypothetical protein [Ricinus communis] gi|223543037|gb|EEF44572.1| conserved hypothetical protein [Ricinus communis]

 Score =  487 bits (1254), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 266/392 (67%), Positives = 305/392 (77%), Gaps = 30/392 (7%)

Query: 1   MATASFSNLPTRAFSPSYHNCHQSFVIKNITRQIPNPHLINFSLTCTSSTP----NKNKT 56
           MA A+FSNLPTRA + S H+ +    +   T  + NP +   +++  S+TP    + +  
Sbjct: 1   MAIANFSNLPTRA-ALSLHSGNH---LHRRTFTVINPRITTTTVSKLSTTPLTHSSSHNR 56

Query: 57  CRPTVIFASGGGKGGGGSWGSGGGGGGGDDD----------AGFHNCTEAIFALAKAGRT 106
              T++F+SG G G GG  G  GGGGGG             A   N TEA  ALA+ GR+
Sbjct: 57  FHTTLVFSSGHGGGTGGYGGGSGGGGGGGGGGDGRSDDDSDAESRNRTEAFLALAEVGRS 116

Query: 107 LGDLPKDLAGAIEAGRVPAAIVKRYLELEKSPVFRWLLNFGGFRERLLADDLFLAKVAME 166
           L  LPKDLAGAIEAGR+P +IV RY ELEKSP+FRWLL FGGF+ERLLADDLFL KVA+E
Sbjct: 117 LESLPKDLAGAIEAGRLPGSIVHRYFELEKSPIFRWLLQFGGFKERLLADDLFLTKVAIE 176

Query: 167 CGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLPAPTISLRPPLAMSTG 226
           CGVG+FTKTAAELE+RRE F+KELDFVFADVVMAIIADFMLVWLPAPT+SLRPPLA+S G
Sbjct: 177 CGVGIFTKTAAELEKRREKFTKELDFVFADVVMAIIADFMLVWLPAPTVSLRPPLAVSAG 236

Query: 227 PIAKFFFNCPDNAF------------QRIGAIVRNGAKLFAVGTSASLVGVGITNALINA 274
            IAKFF+ CPDNAF            QR+GAIVRNG KLFAVGTSASLVGVG+TN LINA
Sbjct: 237 GIAKFFYTCPDNAFQVALAGTSYSFLQRVGAIVRNGGKLFAVGTSASLVGVGVTNILINA 296

Query: 275 RKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHENKIILA 334
           RK LD SFAGEAEDVPI+STS+ YGVYMAVSSNLRYQ+LAGVIEQRILEPLLH++K+IL+
Sbjct: 297 RKILDKSFAGEAEDVPIVSTSIGYGVYMAVSSNLRYQILAGVIEQRILEPLLHQHKVILS 356

Query: 335 AICFAFRTGNTFLGSLMWVDYARWVGIQKMRE 366
           AICFA RTGNTFLGSLMWVDYARWVGIQK+RE
Sbjct: 357 AICFAVRTGNTFLGSLMWVDYARWVGIQKIRE 388

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225450009|ref|XP_002274472.1| PREDICTED: uncharacterized protein LOC100255131 [Vitis vinifera]

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 272/384 (70%), Positives = 301/384 (78%), Gaps = 22/384 (5%)

Query: 1   MATASFSNLPTRAFSPSYHNCHQSFVIKNIT-RQIPNPHLINFSLTCTSSTPNKNKTCRP 59
           MA A+FSN  +RA S      H S  I ++T R+I    +    LT      +  +   P
Sbjct: 1   MAIATFSNFSSRALSFPTPTPHLSPPILSVTTRRITAASV----LTPPQRIFDSRRYRLP 56

Query: 60  TVIFA-----SGGGKGGGGSWGSGGGGGGGDDDAGFHNCTEAIFALAKAGRTLGDLPKDL 114
           TV+ A     SGG  GGGG  G GGGGGG D DA   N TEAI ALA+ GR+L  LPKDL
Sbjct: 57  TVVLAVGDGGSGGVPGGGGGGGGGGGGGGEDGDAEERNRTEAILALAEMGRSLDSLPKDL 116

Query: 115 AGAIEAGRVPAAIVKRYLELEKSPVFRWLLNFGGFRERLLADDLFLAKVAMECGVGVFTK 174
           A A++AGR+P AIV RY ELEKS VFRWLL FGGF+ERLLADDLFLAKVAMECGVG+FTK
Sbjct: 117 AAAVQAGRIPGAIVSRYFELEKSAVFRWLLQFGGFKERLLADDLFLAKVAMECGVGIFTK 176

Query: 175 TAAELERRRENFSKELDFVFADVVMAIIADFMLVWLPAPTISLRPPLAMSTGPIAKFFFN 234
           TAAELERRRE FSKELDFVFADVVMAIIADFMLVWLPAPT+SL+PPLA+S G +AKFF+ 
Sbjct: 177 TAAELERRREKFSKELDFVFADVVMAIIADFMLVWLPAPTVSLKPPLAVSAGALAKFFYR 236

Query: 235 CPDNAF------------QRIGAIVRNGAKLFAVGTSASLVGVGITNALINARKALDTSF 282
           CPDNAF            QRIGAIVRNGAKLFAVGT ASLVG GITNALINARKA D SF
Sbjct: 237 CPDNAFQVALAGTSYSFLQRIGAIVRNGAKLFAVGTGASLVGTGITNALINARKAFDKSF 296

Query: 283 AGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHENKIILAAICFAFRT 342
           A EAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLH++K++L+A+CFA RT
Sbjct: 297 AAEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHQHKLMLSAVCFAVRT 356

Query: 343 GNTFLGSLMWVDYARWVGIQKMRE 366
           GNTFLGSLMWVDYARW+GIQK+RE
Sbjct: 357 GNTFLGSLMWVDYARWIGIQKIRE 380

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356542804|ref|XP_003539855.1| PREDICTED: uncharacterized protein LOC100818590 [Glycine max]

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 225/288 (78%), Positives = 252/288 (87%), Gaps = 12/288 (4%)

Query: 91  HNCTEAIFALAKAGRTLGDLPKDLAGAIEAGRVPAAIVKRYLELEKSPVFRWLLNFGGFR 150
            N  EA+  LA+AGR L  LP DLA A+EAGRVP +IVKR  ELEKS VFRWLLNFGGFR
Sbjct: 85  RNREEALLVLAEAGRPLEKLPADLAAAVEAGRVPGSIVKRLFELEKSAVFRWLLNFGGFR 144

Query: 151 ERLLADDLFLAKVAMECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWL 210
           ERLLADDLFLAKVAMECGVG+FTKTAAELE+R+ENF+KELDFV ADVVMAI+ADFMLVWL
Sbjct: 145 ERLLADDLFLAKVAMECGVGIFTKTAAELEKRKENFTKELDFVCADVVMAIVADFMLVWL 204

Query: 211 PAPTISLRPPLAMSTGPIAKFFFNCPDNAF------------QRIGAIVRNGAKLFAVGT 258
           PAPT+SLRPPLA+S G IAKFF+ CP+NAF            QRIGAIVRNGAKLFAVGT
Sbjct: 205 PAPTVSLRPPLAVSAGTIAKFFYGCPENAFQVALAGTSYSLIQRIGAIVRNGAKLFAVGT 264

Query: 259 SASLVGVGITNALINARKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIE 318
            ASL+G G+TNALINARK +D SFA EAEDVPIISTS+AYGVYMAVSSNLRYQVLAGVIE
Sbjct: 265 GASLIGTGVTNALINARKVVDKSFAAEAEDVPIISTSIAYGVYMAVSSNLRYQVLAGVIE 324

Query: 319 QRILEPLLHENKIILAAICFAFRTGNTFLGSLMWVDYARWVGIQKMRE 366
           QRILEPLLH++K++L+A+CFA RTGNTFLGSL+WVDYARWVG+QK+R+
Sbjct: 325 QRILEPLLHQHKLMLSAVCFAVRTGNTFLGSLLWVDYARWVGVQKIRD 372

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356531649|ref|XP_003534389.1| PREDICTED: uncharacterized protein LOC100808020 [Glycine max]

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 226/288 (78%), Positives = 251/288 (87%), Gaps = 12/288 (4%)

Query: 91  HNCTEAIFALAKAGRTLGDLPKDLAGAIEAGRVPAAIVKRYLELEKSPVFRWLLNFGGFR 150
            N  EA+  LA+AGR L  LP DLA AI AGRVP +IVKR  ELEKS VFRWLLNFGGFR
Sbjct: 89  RNREEALLVLAEAGRPLEKLPADLAAAIGAGRVPGSIVKRLFELEKSAVFRWLLNFGGFR 148

Query: 151 ERLLADDLFLAKVAMECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWL 210
           ERLLADDLFLAKVAMECGVG+FTKTAAELE+R+ENF+KELDFV ADVVMAI+ADFMLVWL
Sbjct: 149 ERLLADDLFLAKVAMECGVGIFTKTAAELEKRKENFTKELDFVCADVVMAIVADFMLVWL 208

Query: 211 PAPTISLRPPLAMSTGPIAKFFFNCPDNAF------------QRIGAIVRNGAKLFAVGT 258
           PAPT+SLRPPLA+S G IAKFF+ CP+NAF            QRIGAIVRNGAKLFAVGT
Sbjct: 209 PAPTVSLRPPLAVSAGTIAKFFYGCPENAFQVALAGTSYSLIQRIGAIVRNGAKLFAVGT 268

Query: 259 SASLVGVGITNALINARKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIE 318
            ASL+G G+TNALINARK +D SFA EAEDVPIISTS+AYGVYMAVSSNLRYQVLAGVIE
Sbjct: 269 GASLIGTGVTNALINARKVVDKSFAAEAEDVPIISTSIAYGVYMAVSSNLRYQVLAGVIE 328

Query: 319 QRILEPLLHENKIILAAICFAFRTGNTFLGSLMWVDYARWVGIQKMRE 366
           QRILEPLLH++K++L+AICFA RTGNTFLGSL+WVDYARWVG+QK+R+
Sbjct: 329 QRILEPLLHQHKLMLSAICFAVRTGNTFLGSLLWVDYARWVGVQKIRD 376

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225435391|ref|XP_002285363.1| PREDICTED: uncharacterized protein LOC100265633 [Vitis vinifera]

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 216/288 (75%), Positives = 254/288 (88%), Gaps = 12/288 (4%)

Query: 91  HNCTEAIFALAKAGRTLGDLPKDLAGAIEAGRVPAAIVKRYLELEKSPVFRWLLNFGGFR 150
           +N   A+  LA+ GR+L  +PKDLA AIE+G++PAAIV++YLELEKS VFRWLL FGGFR
Sbjct: 94  NNKKAAVLVLAEMGRSLESVPKDLAAAIESGKIPAAIVEKYLELEKSAVFRWLLQFGGFR 153

Query: 151 ERLLADDLFLAKVAMECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWL 210
           ERLLADDLFLAKVAMECGVG+FTKTAAE ERRRENF KELDFV ADVVMAIIADFMLVWL
Sbjct: 154 ERLLADDLFLAKVAMECGVGIFTKTAAEYERRRENFFKELDFVIADVVMAIIADFMLVWL 213

Query: 211 PAPTISLRPPLAMSTGPIAKFFFNCPDNAF------------QRIGAIVRNGAKLFAVGT 258
           PAPT+SLRPPLA+S G IAKFF +CP+NAF            QRIGAIVRNG+KLFAVGT
Sbjct: 214 PAPTVSLRPPLAVSAGAIAKFFHSCPENAFQVALAGTSFSFLQRIGAIVRNGSKLFAVGT 273

Query: 259 SASLVGVGITNALINARKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIE 318
           ++SLVG  +TNA+INARKA+D+S AGE EDVP++STSVAYGVYMA+SSNLRYQV+AGV+E
Sbjct: 274 TSSLVGTLVTNAIINARKAVDSSSAGEVEDVPVLSTSVAYGVYMAISSNLRYQVVAGVVE 333

Query: 319 QRILEPLLHENKIILAAICFAFRTGNTFLGSLMWVDYARWVGIQKMRE 366
           QRILEP+LH++K++L+A+CFA RTGNTFLGSL+WVDYARWVG+QK++E
Sbjct: 334 QRILEPMLHKHKLLLSALCFAVRTGNTFLGSLLWVDYARWVGVQKVQE 381

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|125552186|gb|EAY97895.1| hypothetical protein OsI_19813 [Oryza sativa Indica Group]

 Score =  444 bits (1141), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 212/287 (73%), Positives = 243/287 (84%), Gaps = 12/287 (4%)

Query: 88  AGFHNCTEAIFALAKAGRTLGDLPKDLAGAIEAGRVPAAIVKRYLELEKSPVFRWLLNFG 147
           A  H   EA+F LA+ GR L  LP DLA AIE GRVP  IV+R+ +LEKS +FRWLL FG
Sbjct: 11  AASHPTREALFVLAQLGRKLESLPADLAAAIEGGRVPGEIVQRFADLEKSGLFRWLLQFG 70

Query: 148 GFRERLLADDLFLAKVAMECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFML 207
           GF+ERLLADDLFLAKVAMECGVG+FTKTAAE ERRRENF KELDFV ADVVMAI+ADFML
Sbjct: 71  GFKERLLADDLFLAKVAMECGVGIFTKTAAEYERRRENFVKELDFVIADVVMAIVADFML 130

Query: 208 VWLPAPTISLRPPLAMSTGPIAKFFFNCPDNAF------------QRIGAIVRNGAKLFA 255
           VWLPAPT+SL+PPLA++ G IAKFF NCPDNAF            QR+GAI+RNGAKLFA
Sbjct: 131 VWLPAPTVSLQPPLAVNAGSIAKFFHNCPDNAFQVALAGTSYSLLQRVGAIMRNGAKLFA 190

Query: 256 VGTSASLVGVGITNALINARKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAG 315
           VGTSASL+G G+TNALI ARKA+   F GE+ED+PI+STSVAYGVYMAVSSNLRYQ+LAG
Sbjct: 191 VGTSASLIGTGVTNALIKARKAVSKDFEGESEDIPIVSTSVAYGVYMAVSSNLRYQILAG 250

Query: 316 VIEQRILEPLLHENKIILAAICFAFRTGNTFLGSLMWVDYARWVGIQ 362
           VIEQR+LEPLLH +K++L+A+CFA RTGNTFLGSL+WVDYA+W+GIQ
Sbjct: 251 VIEQRMLEPLLHHHKLVLSALCFAVRTGNTFLGSLLWVDYAKWIGIQ 297

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115463661|ref|NP_001055430.1| Os05g0388600 [Oryza sativa Japonica Group] gi|54287600|gb|AAV31344.1| unknown protein [Oryza sativa Japonica Group] gi|113578981|dbj|BAF17344.1| Os05g0388600 [Oryza sativa Japonica Group] gi|215740932|dbj|BAG97427.1| unnamed protein product [Oryza sativa Japonica Group] gi|222631454|gb|EEE63586.1| hypothetical protein OsJ_18403 [Oryza sativa Japonica Group]

 Score =  440 bits (1131), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 211/283 (74%), Positives = 242/283 (85%), Gaps = 12/283 (4%)

Query: 92  NCTEAIFALAKAGRTLGDLPKDLAGAIEAGRVPAAIVKRYLELEKSPVFRWLLNFGGFRE 151
           N  EA+F LA+ GR L  LP DLA AIE GRVP  IV+R+ +LEKS +FRWLL FGGF+E
Sbjct: 96  NRREALFVLAQLGRKLESLPADLAAAIEGGRVPGEIVQRFADLEKSGLFRWLLQFGGFKE 155

Query: 152 RLLADDLFLAKVAMECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLP 211
           RLLADDLFLAKVAMECGVG+FTKTAAE ERRRENF KELDFV ADVVMAI+ADFMLVWLP
Sbjct: 156 RLLADDLFLAKVAMECGVGIFTKTAAEYERRRENFVKELDFVIADVVMAIVADFMLVWLP 215

Query: 212 APTISLRPPLAMSTGPIAKFFFNCPDNAF------------QRIGAIVRNGAKLFAVGTS 259
           APT+SL+PPLA++ G IAKFF NCPDNAF            QR+GAI+RNGAKLFAVGTS
Sbjct: 216 APTVSLQPPLAVNAGSIAKFFHNCPDNAFQVALAGTSYSLLQRVGAIMRNGAKLFAVGTS 275

Query: 260 ASLVGVGITNALINARKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQ 319
           ASL+G G+TNALI ARKA+   F GE+ED+PI+STSVAYGVYMAVSSNLRYQ+LAGVIEQ
Sbjct: 276 ASLIGTGVTNALIKARKAVSKDFEGESEDIPIVSTSVAYGVYMAVSSNLRYQILAGVIEQ 335

Query: 320 RILEPLLHENKIILAAICFAFRTGNTFLGSLMWVDYARWVGIQ 362
           R+LEPLLH +K++L+A+CFA RTGNTFLGSL+WVDYA+W+GIQ
Sbjct: 336 RMLEPLLHHHKLVLSALCFAVRTGNTFLGSLLWVDYAKWIGIQ 378

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|413945208|gb|AFW77857.1| hypothetical protein ZEAMMB73_229307 [Zea mays]

 Score =  440 bits (1131), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 207/283 (73%), Positives = 243/283 (85%), Gaps = 12/283 (4%)

Query: 92  NCTEAIFALAKAGRTLGDLPKDLAGAIEAGRVPAAIVKRYLELEKSPVFRWLLNFGGFRE 151
           N  EA+F LA+ GR L  LP DLA A+E GR+P  IV+R+++LE SPVFRWLL FGGF+E
Sbjct: 105 NRREALFVLAQLGRKLESLPADLAAAVEGGRIPGEIVRRFVDLEASPVFRWLLQFGGFKE 164

Query: 152 RLLADDLFLAKVAMECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLP 211
           RLLADDLFL KVA+ECGVG+FTKTAAE E+RRENF KELDFV ADVVMAI+ADFMLVWLP
Sbjct: 165 RLLADDLFLTKVAIECGVGIFTKTAAEYEKRRENFVKELDFVIADVVMAIVADFMLVWLP 224

Query: 212 APTISLRPPLAMSTGPIAKFFFNCPDNAF------------QRIGAIVRNGAKLFAVGTS 259
           APT+SL+PPLAM++G IAKFF+NCPDNAF            QR+GAI+RNGAKLFAVGTS
Sbjct: 225 APTVSLQPPLAMNSGAIAKFFYNCPDNAFQVALSGTSYSLLQRVGAILRNGAKLFAVGTS 284

Query: 260 ASLVGVGITNALINARKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQ 319
           ASL+G G+TNALI AR+A    FAGE E++PI+STSVAYGVYMAVSSNLRYQVLAGVIEQ
Sbjct: 285 ASLIGTGVTNALIKARQAASKDFAGEVENIPILSTSVAYGVYMAVSSNLRYQVLAGVIEQ 344

Query: 320 RILEPLLHENKIILAAICFAFRTGNTFLGSLMWVDYARWVGIQ 362
           R+LEPLLH++K++L+A CFA RTGNTFLGSL+W+DYARW+G+Q
Sbjct: 345 RMLEPLLHQHKLVLSAACFAVRTGNTFLGSLLWIDYARWIGVQ 387

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|226529786|ref|NP_001143763.1| uncharacterized protein LOC100276525 [Zea mays] gi|195626500|gb|ACG35080.1| hypothetical protein [Zea mays]

 Score =  439 bits (1130), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 207/283 (73%), Positives = 243/283 (85%), Gaps = 12/283 (4%)

Query: 92  NCTEAIFALAKAGRTLGDLPKDLAGAIEAGRVPAAIVKRYLELEKSPVFRWLLNFGGFRE 151
           N  EA+F LA+ GR L  LP DLA A+E GR+P  IV+R+++LE SPVFRWLL FGGF+E
Sbjct: 105 NRREALFVLAQLGRKLESLPADLAAAVEGGRIPGEIVRRFVDLEASPVFRWLLQFGGFKE 164

Query: 152 RLLADDLFLAKVAMECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLP 211
           RLLADDLFL KVA+ECGVG+FTKTAAE E+RRENF KELDFV ADVVMAI+ADFMLVWLP
Sbjct: 165 RLLADDLFLTKVAIECGVGIFTKTAAEYEKRRENFVKELDFVIADVVMAIVADFMLVWLP 224

Query: 212 APTISLRPPLAMSTGPIAKFFFNCPDNAF------------QRIGAIVRNGAKLFAVGTS 259
           APT+SL+PPLAM++G IAKFF+NCPDNAF            QR+GAI+RNGAKLFAVGTS
Sbjct: 225 APTVSLQPPLAMNSGAIAKFFYNCPDNAFQVALSGTSYSLLQRVGAILRNGAKLFAVGTS 284

Query: 260 ASLVGVGITNALINARKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQ 319
           ASL+G G+TNALI AR+A    FAGE E++PI+STSVAYGVYMAVSSNLRYQVLAGVIEQ
Sbjct: 285 ASLIGTGVTNALIKARQAASKDFAGEVENIPILSTSVAYGVYMAVSSNLRYQVLAGVIEQ 344

Query: 320 RILEPLLHENKIILAAICFAFRTGNTFLGSLMWVDYARWVGIQ 362
           R+LEPLLH++K++L+A CFA RTGNTFLGSL+W+DYARW+G+Q
Sbjct: 345 RMLEPLLHQHKLVLSAACFAVRTGNTFLGSLLWIDYARWIGVQ 387

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	366
TAIR|locus:505006615	386	AT5G12470 "AT5G12470" [Arabido	0.743	0.704	0.704	1.8e-103
TAIR|locus:2077828	339	AT3G08630 "AT3G08630" [Arabido	0.617	0.666	0.353	2.6e-24
TAIR|locus:2158155	433	RER1 "AT5G22790" [Arabidopsis	0.674	0.570	0.298	4.3e-24
TAIR|locus:2077838	337	AT3G08640 "AT3G08640" [Arabido	0.568	0.617	0.337	3.8e-23
TAIR|locus:2078446	745	AT3G56140 "AT3G56140" [Arabido	0.513	0.252	0.346	1.6e-22
TAIR|locus:2065649	432	LCD1 "AT2G37860" [Arabidopsis	0.672	0.569	0.287	2.2e-22
TAIR|locus:2063136	735	AT2G40400 [Arabidopsis thalian	0.510	0.254	0.353	4.2e-22
TAIR|locus:2176826	521	AT5G24690 "AT5G24690" [Arabido	0.666	0.468	0.263	1.2e-08

TAIR|locus:505006615 AT5G12470 "AT5G12470" [Arabidopsis thaliana (taxid:3702)]

 Score = 1025 (365.9 bits), Expect = 1.8e-103, P = 1.8e-103
 Identities = 200/284 (70%), Positives = 236/284 (83%)

Query:    92 NCTEAIFALAKAGRTLGDLPKDLAGAIEAGRVPAAIVKRYLELEKSPVFRWLLNFGGFRE 151
             N  EA+  L ++G  L  LPKDLA AIEAGR+P +++ R+LEL+KS V RWL+ FGGFRE
Sbjct:   101 NRNEAMLLLKESGIELESLPKDLAAAIEAGRIPGSVITRFLELQKSAVMRWLMQFGGFRE 160

Query:   152 RLLADDLFLAKVAMECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLP 211
             RLLADDLF+AK+AMECGVG+FTKTAAE ERRRENF  EL+ VFADV MAIIADFMLV+LP
Sbjct:   161 RLLADDLFMAKLAMECGVGIFTKTAAEYERRRENFFNELEVVFADVAMAIIADFMLVYLP 220

Query:   212 APTISLRPPLAMSTGPIAKFFFNCPDNAFQ------------RIGAIVRNGAKLFAVGTS 259
             APT+SLRPPLA++ G I+KFF NCPDNAFQ            R+GAI RNGAKLFAVGT+
Sbjct:   221 APTVSLRPPLALTAGGISKFFHNCPDNAFQVALSGTSYTLLQRLGAITRNGAKLFAVGTT 280

Query:   260 ASLVGVGITNALINARKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQ 319
             +SLVG  ITNA I ARKA+D +  GE E VPI+STSVAYGVYMAVSSNLRYQ++AGVIEQ
Sbjct:   281 SSLVGTAITNAFIKARKAVDQNSEGEVETVPIVSTSVAYGVYMAVSSNLRYQIVAGVIEQ 340

Query:   320 RILEPLLHENKIILAAICFAFRTGNTFLGSLMWVDYARWVGIQK 363
             R+LEP+LH++K+ L+A+CFA RTGNTFLGSL+WVDYAR +GIQK
Sbjct:   341 RLLEPMLHQHKLALSALCFAVRTGNTFLGSLLWVDYARLIGIQK 384

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009706 "chloroplast inner membrane" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0009536 "plastid" evidence=IDA

TAIR|locus:2077828 AT3G08630 "AT3G08630" [Arabidopsis thaliana (taxid:3702)]

 Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
 Identities = 86/243 (35%), Positives = 119/243 (48%)

Query:   133 ELEKSPVFRWLLNFGGFRERLLADDLFLAKVAMECGVGVFTKTAAELERRRENFS-KELD 191
             E E SP     L   G+R R+ AD  F  KV ME  VGV      ++  R  NF   ELD
Sbjct:    89 EEESSPWGPLGLFIQGWRSRVAADSQFPFKVLMEMLVGVSANVLGDMASR-PNFGLNELD 147

Query:   192 FVFADVVMAIIADFMLVWLPAPT-IS-----LRPPLAMSTGPIAKFFFNCPDNAFQRIGA 245
             FVF+ +V+  I +F L++L AP+ IS     L P +  S  P +  F         R G 
Sbjct:   148 FVFSTLVVGSILNFTLMYLLAPSAISHGSSNLLPGIFRSC-PSSHMFEQGNFTLMNRFGT 206

Query:   246 IVRNGAKLFAVGTSASLVGVGITNALINARKALDTSFAGEAEDVPIISTSVAYGVYMAVS 305
             +V  G     VG +A LVG  I+N LI  RK +D SF    +  P +  S+ +  +M VS
Sbjct:   207 LVYKGMVFATVGLAAGLVGTAISNGLIMLRKKIDPSFETPNKPPPTLLNSLTWATHMGVS 266

Query:   306 SNLRYQVLAGV--IEQRILEPLLHENKIILAAICFAFRTGNTFLGSLMWVDYARWVGIQK 363
             +N+RYQ L G   + ++ L PL+ +  +I      A R  N  LG + +V  AR  G Q 
Sbjct:   267 ANVRYQTLNGAEFLLEKSLPPLVFKTSVI------ALRVVNNVLGGMSFVTLARMTGSQS 320

Query:   364 MRE 366
             + E
Sbjct:   321 VEE 323

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0009536 "plastid" evidence=IDA

TAIR|locus:2158155 RER1 "AT5G22790" [Arabidopsis thaliana (taxid:3702)]

 Score = 278 (102.9 bits), Expect = 4.3e-24, P = 4.3e-24
 Identities = 82/275 (29%), Positives = 135/275 (49%)

Query:   110 LPKDLAGAIEAGRVPAAIVKRYLELEKS--PVFRWLLNFGGFRERLLADDLFLAKVAMEC 167
             LP+D+  A ++  +    + RYL+L+ S  P+   + +    R R+LAD  FL KV  E 
Sbjct:   165 LPEDMLEAAKSVGIRKLFLLRYLDLQGSVWPLGFLMRSCAMLRNRMLADPSFLFKVGTEV 224

Query:   168 GVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLPAPTISLRPPLAMSTGP 227
              +     T AE+++R E+F  E +   AD+++ ++ D  LV L AP   +  P   STG 
Sbjct:   225 AIDSCCATFAEVQKRGEDFWSEFELYAADLLVGLVVDVALVGLLAPYARIGKPSVASTGL 284

Query:   228 IAKFFFNC---PDNAF------------QRIGAIVRNGAKLFAVGTSASLVGVGITNALI 272
                    C   P + F            QRI      G    +VG    L+G GI N ++
Sbjct:   285 FKDLKRACASLPSSVFEAERPGCKFSVNQRIATFFYKGLLYGSVGFGCGLIGQGIANLIM 344

Query:   273 NARKALDTSFAGEAEDVPI---ISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHEN 329
              A++++  S     EDVPI     ++  +GV++ +SSN RYQ++ G+  +R++E      
Sbjct:   345 TAKRSVKKS----EEDVPIPPLFESAALWGVFLGLSSNARYQIINGL--ERVVEGSTAAK 398

Query:   330 KIILAAICFAF--RTGNTFLGSLMWVDYARWVGIQ 362
             +I + A+ F    R  N   G + +VD+A+  G+Q
Sbjct:   399 RIPVVAMAFTVGVRFANNVYGGMQFVDWAKLSGVQ 433

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009706 "chloroplast inner membrane" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0009536 "plastid" evidence=IDA

TAIR|locus:2077838 AT3G08640 "AT3G08640" [Arabidopsis thaliana (taxid:3702)]

 Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
 Identities = 78/231 (33%), Positives = 118/231 (51%)

Query:   148 GFRERLLADDLFLAKVAMECGVGVFTKTAAELERRRENFS-KELDFVFADVVMAIIADFM 206
             G+R R+ AD  F  KV ME  VG+      ++  R  NF   ELDFVF+ +V+  I +F+
Sbjct:   107 GWRSRVAADPQFPFKVLMEEIVGLSACVLGDMASR-PNFGLNELDFVFSTLVVGSILNFV 165

Query:   207 LVWLPAPTISLRPPLAMSTGPIAKFFFNCPDN-AFQ--------RIGAIVRNGAKLFAVG 257
             L+++ APT +    L  S+  +   F NCP +  F+        R G +V  G    +VG
Sbjct:   166 LMYMLAPTAAT---LG-SSQTLPGIFRNCPSSHMFEQGSFTVMNRFGTLVYKGMVFASVG 221

Query:   258 TSASLVGVGITNALINARKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGV- 316
              +A LVG  I+N LI  RK +D SF    +  P +  S+ +  +M VS+N RYQ L G+ 
Sbjct:   222 LAAGLVGTAISNGLIMLRKKMDPSFETPNKPPPTVLNSLTWATHMGVSANARYQTLNGIE 281

Query:   317 -IEQRILEPLLHENKIILAAICFAFRTGNTFLGSLMWVDYARWVGIQKMRE 366
              +  ++L PL+ +  +I+       R  N   G + +V  AR  G Q + E
Sbjct:   282 FLLAKVLPPLVFKTSVIV------LRCANNVAGGMSFVLLARMTGSQSVEE 326

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009536 "plastid" evidence=IDA

TAIR|locus:2078446 AT3G56140 "AT3G56140" [Arabidopsis thaliana (taxid:3702)]

 Score = 271 (100.5 bits), Expect = 1.6e-22, P = 1.6e-22
 Identities = 70/202 (34%), Positives = 104/202 (51%)

Query:    92 NC---TEAIFALAKAGRTLGDLPKDLAGAIEAGRVPAAIVKRYLELEKSPVFRWLLN-FG 147
             NC    E    +  AGR    LP D+   ++ G V   +++   +LE+ P+   L   F 
Sbjct:   416 NCFDRAEIARVMNAAGRRRDALPPDIQNGLDLGLVSPEVLQNLFDLEQYPLISELTQRFQ 475

Query:   148 GFRERLLADDLFLAKVAMECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFML 207
             GFRERLLAD  FL ++A+E  + + T   A+ E+R+ENF +E+D+V  D V   + DF  
Sbjct:   476 GFRERLLADPKFLNRLAIEEAISITTTLIAQYEKRKENFFEEIDYVITDTVRGSVVDFFT 535

Query:   208 VWLPAPTISLRPPLAMSTGP-----IAKFFFNCPDNAFQR--IGAIVRNGAKLFAVGTSA 260
             VWLPAPT+S       +TGP     +     + PDNAFQ+   G       ++ +V    
Sbjct:   536 VWLPAPTLSFLSYADETTGPDSIDALRGLLGSIPDNAFQKSLAGREWNLNLRIASVIVGG 595

Query:   261 -SLVGVGITN--ALINARKALD 279
               L GVG+ +  A + A  AL+
Sbjct:   596 LKLAGVGVVSSFAAVGASNALN 617

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009543 "chloroplast thylakoid lumen" evidence=ISS

TAIR|locus:2065649 LCD1 "AT2G37860" [Arabidopsis thaliana (taxid:3702)]

 Score = 263 (97.6 bits), Expect = 2.2e-22, P = 2.2e-22
 Identities = 79/275 (28%), Positives = 138/275 (50%)

Query:   110 LPKDLAGAIEAGRVPAAIVKRYLELEKSP-VFRWLL-NFGGFRERLLADDLFLAKVAMEC 167
             LP D+  A +   +   ++ RYL+L+ S  +  + + ++   R R+LAD  FL K+  E 
Sbjct:   165 LPSDMLEAAKNYGIRKVLLLRYLDLQSSAGLLGFAIRSWAMLRNRMLADPSFLFKIGAEI 224

Query:   168 GVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLPAPTISLRPPLAMSTGP 227
              +     T AE+++R ++F  E +   AD+++  + +  LV + AP +    P A S G 
Sbjct:   225 VIDSCCATVAEVQKRGKDFWAEFELYVADLLVGTVVNIALVGMLAPYVRFGQPSA-SPGF 283

Query:   228 IAK--FFFNC-PDNAF------------QRIGAIVRNGAKLFAVGTSASLVGVGITNALI 272
             + +  F +N  P + F            QR+      G    AVG    +VG GI N ++
Sbjct:   284 LGRMVFAYNALPSSVFEAERPGCRFSAQQRLATYFYKGIMYGAVGFGCGIVGQGIANLIM 343

Query:   273 NARKALDTSFAGEAEDVPI---ISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHEN 329
              A++ ++ S     E++P+   I ++  +GV+++VSSN RYQ++ G+  +R++E      
Sbjct:   344 TAKRNINKS----EENIPVPPLIKSAALWGVFLSVSSNTRYQIINGL--ERVVEASPFAK 397

Query:   330 KIILAAICFAF--RTGNTFLGSLMWVDYARWVGIQ 362
             K   AA+ F    R  N   G + +VD+AR  G Q
Sbjct:   398 KFPPAAMAFTVGVRLANNIYGGMQFVDWARLSGCQ 432

GO:0003674 "molecular_function" evidence=ND

GO:0048366 "leaf development" evidence=IMP

GO:0016020 "membrane" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009536 "plastid" evidence=IDA

TAIR|locus:2063136 AT2G40400 [Arabidopsis thaliana (taxid:3702)]

 Score = 267 (99.0 bits), Expect = 4.2e-22, P = 4.2e-22
 Identities = 71/201 (35%), Positives = 105/201 (52%)

Query:    92 NC---TEAIFALAKAGRTLGDLPKDLAGAIEAGRVPAAIVKRYLELEKSPVFRWLLN-FG 147
             NC    E    +  AGR    LP+D+   ++ G V   I++ + +LE+ P+   L   F 
Sbjct:   407 NCFDRAEIARVMNAAGRRRDALPQDIQKGLDLGLVSPEILQNFFDLEQYPLISELTQRFQ 466

Query:   148 GFRERLLADDLFLAKVAMECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFML 207
             GFRERLLAD  FL ++A+E  + + T   A+ E+R+ENF +ELD+V  D V A + DF  
Sbjct:   467 GFRERLLADPKFLNRLAIEEAISITTTLVAQYEKRKENFFEELDYVITDSVRASVVDFFT 526

Query:   208 VWLPAPTISLRPPLAMSTGP-----IAKFFFNCPDNAFQRI--GAIVRNGAKLFAVGTSA 260
             VWLPAPT+S       + GP     +     + PDNAFQ+   G       ++ +V    
Sbjct:   527 VWLPAPTLSFISYADETIGPNSIDALRGLLGSIPDNAFQKSLGGQEWTLSLRIASVIIGG 586

Query:   261 -SLVGVGITN--ALINARKAL 278
               L GVG+ +  A + +  AL
Sbjct:   587 LKLAGVGVVSSFAAVGSSNAL 607

GO:0009507 "chloroplast" evidence=ISM

GO:0009543 "chloroplast thylakoid lumen" evidence=ISS

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

TAIR|locus:2176826 AT5G24690 "AT5G24690" [Arabidopsis thaliana (taxid:3702)]

 Score = 159 (61.0 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 73/277 (26%), Positives = 121/277 (43%)

Query:   105 RTLGDLPKDLAGAIEAGRVPAAIVKRYLELEKSPVFRWLLNFG-------GFRERLLADD 157
             +T+ DLP  L  A E G V +A + ++L +   P    +++          F  R+LAD 
Sbjct:   186 KTMMDLPAGLRQAYEMGLVSSAQMVKFLAINARPTTTRMISRALPQGLSRAFVGRMLADP 245

Query:   158 LFLAKVAMECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLPAPTIS- 216
              FL K+ +E    V      E++ R+    +E D    +V+     +   VWL AP  S 
Sbjct:   246 AFLYKLLLEQAATVGCSVWWEVKNRKNRLKEEWDLALINVLTVSACNAAAVWLLAPCRSY 305

Query:   217 ---LRPPL--AMSTGPIAKFFFNCPDNAF---QRIGAIVRNGAKLFAVGTSASLVGVGIT 268
                 R  L   +   P   F  + P   F   +R  ++    A+L  +G +A  +   ++
Sbjct:   306 GNTFRFDLQNTLQKLPNNLFEMSYPLREFDLQKRFHSLFYKAAELSILGLAAGTLQGSLS 365

Query:   269 NALINARKALDTSFAGEAEDVPIISTS-VAYGVYMAVSSNLRYQVLAGVIEQRILEPLLH 327
             N L   +K         +  VP IST+ + YG ++ + +NLRYQ+L G  E+ +     H
Sbjct:   366 NVLAGKKKNR------VSVTVPSISTNALGYGAFLGIYANLRYQLLCG-FERGVSS---H 415

Query:   328 ENKIILAAICF--AFRTGNTFLGSLMWVDYARWVGIQ 362
              + +I  A+ F  A R  N  LG         W+G++
Sbjct:   416 FD-VIGVALFFGTALRIMNVQLGEK---SRQVWLGVE 448


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.325   0.137   0.414    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      366       341   0.00095  116 3  11 22  0.45    33
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  8
  No. of states in DFA:  604 (64 KB)
  Total size of DFA:  211 KB (2117 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  26.54u 0.16s 26.70t   Elapsed:  00:00:01
  Total cpu time:  26.54u 0.16s 26.70t   Elapsed:  00:00:01
  Start:  Thu May  9 19:15:30 2013   End:  Thu May  9 19:15:31 2013

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009706 "chloroplast inner membrane" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0009536 "plastid" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pg.C_LG_I1877 hypothetical protein (382 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	366
pfam11891	179	pfam11891, DUF3411, Domain of unknown function (DU	4e-70
PLN03138	796	PLN03138, PLN03138, Protein TOC75; Provisional	2e-04

>gnl|CDD|221294 pfam11891, DUF3411, Domain of unknown function (DUF3411)

 Score =  217 bits (554), Expect = 4e-70
 Identities = 75/178 (42%), Positives = 103/178 (57%), Gaps = 12/178 (6%)

Query: 151 ERLLADDLFLAKVAMECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWL 210
           ERLLAD  FL K+AME  + +   T AE+E+R ENF  E D V AD+++  + +F LV+L
Sbjct: 1   ERLLADPSFLFKLAMEEVIDICAATVAEVEKRGENFWAEFDLVAADLLVGSVVNFALVYL 60

Query: 211 PAPTISLRPPLAMSTGPIAKFFFNCPDNAF------------QRIGAIVRNGAKLFAVGT 258
            APT S     A   G + KF  + P N F            QR G +   GAKL AVG 
Sbjct: 61  LAPTRSFGSTAAEMAGGLRKFLGSLPSNVFEKGLPGRSYSLQQRFGTVFYKGAKLAAVGF 120

Query: 259 SASLVGVGITNALINARKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGV 316
            A LVG  I+NAL+ ARKA+D +     +  P+  T++ +G ++ VS+NLRYQ+L G+
Sbjct: 121 IAGLVGQAISNALMAARKAVDKNSEESVKVPPLFKTALLWGAFLGVSANLRYQLLNGL 178

This presumed domain is functionally uncharacterized. This domain is found in eukaryotes. This domain is typically between 168 to 186 amino acids in length. This domain has a conserved RYQ sequence motif. Length = 179

>gnl|CDD|215598 PLN03138, PLN03138, Protein TOC75; Provisional

 Score = 43.3 bits (102), Expect = 2e-04
 Identities = 24/103 (23%), Positives = 34/103 (33%), Gaps = 17/103 (16%)

Query: 4   ASFSNLPTRAFSPSYHNCH------QSFVIKNITRQIPNPHLINFSLTCTSST------- 50
            S S + + A S S  +         S   ++ TR      +   +    SS+       
Sbjct: 2   RSSSTMVSAAASTSLSSSRPQLSSFSSRSPQSATRSPRASSIKCSASASASSSATSSSAS 61

Query: 51  ----PNKNKTCRPTVIFASGGGKGGGGSWGSGGGGGGGDDDAG 89
                         +    GGG GG G +G GGGGGGG     
Sbjct: 62  LVANGAVALLSASAISGGGGGGGGGFGGFGGGGGGGGGGGGGW 104

Length = 796

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	366
PF11891	180	DUF3411: Domain of unknown function (DUF3411); Int	100.0
COG4907	595	Predicted membrane protein [Function unknown]	91.13

>PF11891 DUF3411: Domain of unknown function (DUF3411); InterPro: IPR021825 This presumed domain is functionally uncharacterised

Probab=100.00  E-value=5e-70  Score=494.58  Aligned_cols=166  Identities=54%  Similarity=0.807  Sum_probs=162.1

Q ss_pred             hhhccChhhHHHHHHHhhhhhhhhHHHHHhhcCcchHhHHHHHHHHHHHHHHHHHHhhhhcccccccCCCcccccc-hHh
Q 017752          151 ERLLADDLFLAKVAMECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLPAPTISLRPPLAMSTG-PIA  229 (366)
Q Consensus       151 ~RlLADP~FlfKl~~E~~i~v~~~~~aE~~~Rge~F~~ElDfv~sd~v~g~i~nf~LV~LlAPt~s~~~~~~~~ag-~l~  229 (366)
                      |||||||+|||||++||+||++|+++|||++|||+||+|||||+||+++++|+||+||||||||++++++.+...+ .++
T Consensus         1 ~RllADP~Fl~Kl~~E~~i~i~~~~~~e~~~R~e~f~~E~d~v~~d~v~~~i~n~~lv~llAPt~s~~~~~~~~~~~~~~   80 (180)
T PF11891_consen    1 ERLLADPSFLFKLAIEEVIGIGCATAAEYAKRGERFWNELDFVFSDVVVGSIVNFALVWLLAPTRSFGSPAASSPGGGLQ   80 (180)
T ss_pred             CcccccchHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHHHHhccchHhhCcccccccchHHH
Confidence            7999999999999999999999999999999999999999999999999999999999999999999998775544 899


Q ss_pred             hhhhhCChhHH------------hhHHHHHhcchhhhhhhhHhhhhHHHHHHHHHHHHHhcCcCCCCCCCCCcchhhhhh
Q 017752          230 KFFFNCPDNAF------------QRIGAIVRNGAKLFAVGTSASLVGVGITNALINARKALDTSFAGEAEDVPIISTSVA  297 (366)
Q Consensus       230 k~~~~lP~n~F------------qR~ga~~~KG~~l~~VG~~aglvG~glsN~L~~~Rk~~d~~~~~~~~~pP~l~tal~  297 (366)
                      |+|++||+|+|            ||++||+|||++|++|||+||++|+++||+|+++||++||+||+++++||+++||++
T Consensus        81 ~~~~~~P~n~Fq~~~~g~~fsl~qR~~~~~~kg~~l~~VG~~ag~vg~~lsn~L~~~rk~~~~~~e~~~~~ppv~~ta~~  160 (180)
T PF11891_consen   81 KFLGSLPNNAFQKGYPGRSFSLAQRIGAFVYKGAKLAAVGFIAGLVGTGLSNALIAARKKVDPSFEPSVPVPPVLKTALG  160 (180)
T ss_pred             HHHHhChHHHhccCCCCCcccHHHHHHHHHHcchHhhhhHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCCCHHHHHHH
Confidence            99999999999            899999999999999999999999999999999999999999999999999999999


Q ss_pred             hHhHhhccchhhHHHHHHH
Q 017752          298 YGVYMAVSSNLRYQVLAGV  316 (366)
Q Consensus       298 wg~fMGvSSNlRYQil~Gl  316 (366)
                      ||+|||+|||+|||+|||+
T Consensus       161 ~g~fmGvSsNlRYQil~Gi  179 (180)
T PF11891_consen  161 WGAFMGVSSNLRYQILNGI  179 (180)
T ss_pred             HHHHHhhhHhHHHHHHcCC
Confidence            9999999999999999998

This domain is found in eukaryotes. This domain is typically between 168 to 186 amino acids in length. This domain has a conserved RYQ sequence motif.

>COG4907 Predicted membrane protein [Function unknown]

Probab=91.13  E-value=0.12  Score=54.41  Aligned_cols=10  Identities=30%  Similarity=0.398  Sum_probs=4.4

Q ss_pred             eccccCCCCC
Q 017752           28 KNITRQIPNP   37 (366)
Q Consensus        28 ~~~~~~~~~~   37 (366)
                      ||-+|--.++
T Consensus       551 ~nysr~~~~~  560 (595)
T COG4907         551 NNYSRSFNNL  560 (595)
T ss_pred             cchhhhhccc
Confidence            4445444433

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	366
2pk2_A	358	Cyclin-T1, protein TAT; TAR, twinning, transcripti	93.56

>2pk2_A Cyclin-T1, protein TAT; TAR, twinning, transcription regulation P- TEFB, cell cycle; 2.67A {Homo sapiens} SCOP: a.74.1.1 a.74.1.1 PDB: 2w2h_C

Probab=93.56  E-value=0.0073  Score=58.86  Aligned_cols=9  Identities=0%  Similarity=-0.164  Sum_probs=3.9

Q ss_pred             ccCCCCCcc
Q 017752           31 TRQIPNPHL   39 (366)
Q Consensus        31 ~~~~~~~~~   39 (366)
                      .+.+..++.
T Consensus       246 ~~~~~~L~~  254 (358)
T 2pk2_A          246 EKTPNRLKR  254 (358)
T ss_dssp             TTCTTHHHH
T ss_pred             HhCcccccc
Confidence            344444443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00