Citrus Sinensis ID: 017815

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-----
MTPKALLYKDRFFGNSDTLLLISNNCLYYRHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGVSFIQIPTTVMAQVDSSVGGKTGINHRLGKNLIGAFYQPQCVLVDTDTLNTLPDRELASGLAEVIKYGLIRDAEFFEWQEQNMHKLMARDPRAFAYAIKRSCENKAEVVSLDEKESGLRATLNLGHTFGHAIETGFGYGQWLHGEAVAAGMVMAVDMSYRLGWIDDSIVKRVHNILQQAKLPTAPPDTMTVEMFKSIMAVDKKVADGLLRLILLKGPLGNCVFTGDYDRKALDDTLYAFCKS
cccccccEEccccccccccccccccccccccccccEEEEEEcccccHHHHHHHHHHHHccccccEEEEEEEccccccccHHHHHHHHHHHHHcccccccEEEEEcccccccHHHHHHHHHHHccccEEccHHHHHHHHcccccccccccccccccccccccccEEEEEccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHcHHHHHcccHHHHHHHHHHHHHHHHHccccccccccccHHccccccHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHccccccccccccHHHHHHHHHccccccccEEEEEEEccccccEEEcccccHHHHHHHHHHHHHc
ccccEEEEccccccccHHHHHHccHHHHHHHccccEEEEEEcccHHHHHHHHHHHHHHHcccccEEEEEEEccccccccHHHHHHHHHHHHHcccccccEEEEEEcHHHHHHHHHHHHHHHHccEEEEEEccHHHHHccccccEEEEEEccEEEEEEEEccccEEEEEHHHHHHccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHccHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHccccEEEEEEccccccEEEcccccHHHHHHHHHHHHcc
mtpkallykdrffgnsdtllLISNnclyyrhvqGKKVLVVTNNTVAPLYLDKVtdaltrgnpnvsvenvilpdgenyknMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLrgvsfiqipTTVMAQvdssvggktginhrLGKNligafyqpqcvlvdtdtlntlpdrELASGLAEVIKYGLIRDAEFFEWQEQNMHKLMARDPRAFAYAIKRSCENkaevvsldekesgLRATLNLghtfghaietgfgygqwlhgEAVAAGMVMAVDMSYRLGWIDDSIVKRVHNILqqaklptappdtmTVEMFKSIMAVDKKVADGLLRLILLkgplgncvftgdydrkalDDTLYAFCKS
mtpkallykdrffgnSDTLLLISNNCLYYRHVQGKKVLVVTNNTVAPLYLDKvtdaltrgnpnvsvenvilpdgenyknMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGVSFIQIPTTVMAQVDSSVGGKTGINHRLGKNLIGAFYQPQCVLVDTDTLNTLPDRELASGLAEVIKYGLIRDAEFFEWQEQNMHKLMARDPRAFAYAIKRSCENKAEVVSLDEKESGLRATLNLGHTFGHAIETGFGYGQWLHGEAVAAGMVMAVDMSYRLGWIDDSIVKRVHNILqqaklptappdtMTVEMFKSIMAVDKKVADGLLRLILLKGPLGNCVFTGDYDRKALDDTLYAFCKS
MTPKALLYKDRFFGNSDTLLLISNNCLYYRHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGVSFIQIPTTVMAQVDSSVGGKTGINHRLGKNLIGAFYQPQCVLVDTDTLNTLPDRELASGLAEVIKYGLIRDAEFFEWQEQNMHKLMARDPRAFAYAIKRSCENKAEVVSLDEKESGLRATLNLGHTFGHAIETGFGYGQWLHGEavaagmvmavdmSYRLGWIDDSIVKRVHNILQQAKLPTAPPDTMTVEMFKSIMAVDKKVADgllrlillkgplgNCVFTGDYDRKALDDTLYAFCKS
*****LLYKDRFFGNSDTLLLISNNCLYYRHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGVSFIQIPTTVMAQVDSSVGGKTGINHRLGKNLIGAFYQPQCVLVDTDTLNTLPDRELASGLAEVIKYGLIRDAEFFEWQEQNMHKLMARDPRAFAYAIKRSCENKAEVVSLDEKESGLRATLNLGHTFGHAIETGFGYGQWLHGEAVAAGMVMAVDMSYRLGWIDDSIVKRVHNILQQAKLPTAPPDTMTVEMFKSIMAVDKKVADGLLRLILLKGPLGNCVFTGDYDRKALDDTLYAFC**
**PKALLYKDRFFGNSDTLLLISNNCLYYRHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGVSFIQIPTTVMAQVDSSVGGKTGINHRLGKNLIGAFYQPQCVLVDTDTLNTLPDRELASGLAEVIKYGLIRDAEFFEWQEQNMHKLMARDPRAFAYAIKRSCENKAEVVSLDEKESGLRATLNLGHTFGHAIETGFGYGQWLHGEAVAAGMVMAVDMSYRLGWIDDSIVKRVHNILQQAKLPTAPPDTMTVEMFKSIMAVDKKVADGLLRLILLKGPLGNCVFTGDYDRKALDDTLYAFCKS
MTPKALLYKDRFFGNSDTLLLISNNCLYYRHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGVSFIQIPTTVMAQVDSSVGGKTGINHRLGKNLIGAFYQPQCVLVDTDTLNTLPDRELASGLAEVIKYGLIRDAEFFEWQEQNMHKLMARDPRAFAYAIKRSCENKAEVVSLDEKESGLRATLNLGHTFGHAIETGFGYGQWLHGEAVAAGMVMAVDMSYRLGWIDDSIVKRVHNILQQAKLPTAPPDTMTVEMFKSIMAVDKKVADGLLRLILLKGPLGNCVFTGDYDRKALDDTLYAFCKS
*TPKALLYKDRFFGNSDTLLLISNNCLYYRHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGVSFIQIPTTVMAQVDSSVGGKTGINHRLGKNLIGAFYQPQCVLVDTDTLNTLPDRELASGLAEVIKYGLIRDAEFFEWQEQNMHKLMARDPRAFAYAIKRSCENKAEVVSLDEKESGLRATLNLGHTFGHAIETGFGYGQWLHGEAVAAGMVMAVDMSYRLGWIDDSIVKRVHNILQQAKLPTAPPDTMTVEMFKSIMAVDKKVADGLLRLILLKGPLGNCVFTGDYDRKALDDTLYAFCKS
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MTPKALLYKDRFFGNSDTLLLISNNCLYYRHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGVSFIQIPTTVMAQVDSSVGGKTGINHRLGKNLIGAFYQPQCVLVDTDTLNTLPDRELASGLAEVIKYGLIRDAEFFEWQEQNMHKLMARDPRAFAYAIKRSCENKAEVVSLDEKESGLRATLNLGHTFGHAIETGFGYGQWLHGEAVAAGMVMAVDMSYRLGWIDDSIVKRVHNILQQAKLPTAPPDTMTVEMFKSIMAVDKKVADGLLRLILLKGPLGNCVFTGDYDRKALDDTLYAFCKS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query365 2.2.26 [Sep-21-2011]
B8GPV3361 3-dehydroquinate synthase yes no 0.915 0.925 0.613 1e-120
Q31DP9358 3-dehydroquinate synthase yes no 0.923 0.941 0.605 1e-118
A4XPQ2367 3-dehydroquinate synthase yes no 0.915 0.910 0.619 1e-113
B1J2J5365 3-dehydroquinate synthase yes no 0.920 0.920 0.604 1e-112
Q1IGA7365 3-dehydroquinate synthase yes no 0.920 0.920 0.598 1e-111
Q88CV2365 3-dehydroquinate synthase yes no 0.920 0.920 0.601 1e-111
A6VDF9368 3-dehydroquinate synthase yes no 0.915 0.907 0.589 1e-111
A5WAB1365 3-dehydroquinate synthase yes no 0.920 0.920 0.598 1e-111
A4VH14367 3-dehydroquinate synthase yes no 0.920 0.915 0.589 1e-111
Q02EX9368 3-dehydroquinate synthase yes no 0.915 0.907 0.589 1e-111
>sp|B8GPV3|AROB_THISH 3-dehydroquinate synthase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=aroB PE=3 SV=1 Back     alignment and function desciption
 Score =  433 bits (1113), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 208/339 (61%), Positives = 258/339 (76%), Gaps = 5/339 (1%)

Query: 21  LISNNCLYYRHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNM 80
           L+ +   +   ++GK+V++VTN TVAPLYLD+    L R   +  VE VILPDGE YK M
Sbjct: 21  LLDDPTRFAPRIRGKRVMIVTNETVAPLYLDR----LKRTLGDFRVEAVILPDGEEYKTM 76

Query: 81  DTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGVSFIQIPTTVMAQVDSS 140
           +TL +V+   +E+R DR+ T VALGGGVIGD+ G+AAASY RGV FIQ+PTT+++QVDSS
Sbjct: 77  ETLNQVYTALLEARFDRKATLVALGGGVIGDITGFAAASYQRGVDFIQVPTTLLSQVDSS 136

Query: 141 VGGKTGINHRLGKNLIGAFYQPQCVLVDTDTLNTLPDRELASGLAEVIKYGLIRDAEFFE 200
           VGGKTG+NH LGKN+IGAF+QP+CV++DTDTL+TLPDREL +G+AEVIKYGLI D  FF+
Sbjct: 137 VGGKTGVNHPLGKNMIGAFHQPRCVVIDTDTLDTLPDRELRAGIAEVIKYGLICDRPFFD 196

Query: 201 WQEQNMHKLMARDPRAFAYAIKRSCENKAEVVSLDEKESGLRATLNLGHTFGHAIETGFG 260
           W E NM +L+ARDP A AYAI RSC +KA+VV+ DE+E G RA LNLGHTFGHAIETG G
Sbjct: 197 WLEANMDRLLARDPEALAYAIHRSCHDKAQVVAEDEREGGRRAILNLGHTFGHAIETGMG 256

Query: 261 YGQWLHGEAVAAGMVMAVDMSYRLGWIDDSIVKRVHNILQQAKLPTAPPDTMTVEMFKSI 320
           YG WLHGE VA GMVMA  MS RLGW+D   + R   ++ +A LP  PP  +T E F  +
Sbjct: 257 YGVWLHGEGVATGMVMAARMSRRLGWLDAEDLHRTEALIARAGLPVEPPPEITAERFAEL 316

Query: 321 MAVDKKVADGLLRLILLKGPLGNCVFTGDYDRKALDDTL 359
           M+VDKKV DG LRL+LL+G +G  V T D+D  ALD TL
Sbjct: 317 MSVDKKVLDGQLRLVLLRG-IGEAVVTADFDPAALDATL 354

Thioalkalivibrio sp. (strain HL-EbGR7) (taxid: 396588)
EC: 4EC: .EC: 2EC: .EC: 3EC: .EC: 4
>sp|Q31DP9|AROB_THICR 3-dehydroquinate synthase OS=Thiomicrospira crunogena (strain XCL-2) GN=aroB PE=3 SV=1 Back     alignment and function description
>sp|A4XPQ2|AROB_PSEMY 3-dehydroquinate synthase OS=Pseudomonas mendocina (strain ymp) GN=aroB PE=3 SV=1 Back     alignment and function description
>sp|B1J2J5|AROB_PSEPW 3-dehydroquinate synthase OS=Pseudomonas putida (strain W619) GN=aroB PE=3 SV=1 Back     alignment and function description
>sp|Q1IGA7|AROB_PSEE4 3-dehydroquinate synthase OS=Pseudomonas entomophila (strain L48) GN=aroB PE=3 SV=1 Back     alignment and function description
>sp|Q88CV2|AROB_PSEPK 3-dehydroquinate synthase OS=Pseudomonas putida (strain KT2440) GN=aroB PE=3 SV=1 Back     alignment and function description
>sp|A6VDF9|AROB_PSEA7 3-dehydroquinate synthase OS=Pseudomonas aeruginosa (strain PA7) GN=aroB PE=3 SV=1 Back     alignment and function description
>sp|A5WAB1|AROB_PSEP1 3-dehydroquinate synthase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=aroB PE=3 SV=1 Back     alignment and function description
>sp|A4VH14|AROB_PSEU5 3-dehydroquinate synthase OS=Pseudomonas stutzeri (strain A1501) GN=aroB PE=3 SV=1 Back     alignment and function description
>sp|Q02EX9|AROB_PSEAB 3-dehydroquinate synthase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=aroB PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query365
76782192459 putative 3-dehydroquinate synthase [Fagu 0.942 0.749 0.892 0.0
224134046443 3-dehydroquinate synthase [Populus trich 0.945 0.778 0.901 0.0
118485624443 unknown [Populus trichocarpa] 0.945 0.778 0.901 0.0
224134050375 3-dehydroquinate synthase [Populus trich 0.945 0.92 0.901 0.0
222136863456 3-dehydroquinate synthase [Vitis vinifer 0.945 0.756 0.881 0.0
147858670456 hypothetical protein VITISV_039705 [Viti 0.945 0.756 0.881 0.0
225431071456 PREDICTED: 3-dehydroquinate synthase [Vi 0.945 0.756 0.881 0.0
449456829452 PREDICTED: 3-dehydroquinate synthase-lik 0.945 0.763 0.884 0.0
356538307437 PREDICTED: 3-dehydroquinate synthase-lik 0.920 0.768 0.901 0.0
363807450436 uncharacterized protein LOC100812989 [Gl 0.920 0.770 0.907 1e-180
>gi|76782192|gb|ABA54866.1| putative 3-dehydroquinate synthase [Fagus sylvatica] Back     alignment and taxonomy information
 Score =  647 bits (1670), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 307/344 (89%), Positives = 323/344 (93%)

Query: 21  LISNNCLYYRHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNM 80
           L+    L  +HV GK+VLVVTN+ V PLYLDKV +ALT+GNPNVSVE+VILPDGE YK+M
Sbjct: 115 LLDQPHLLQKHVHGKRVLVVTNDKVGPLYLDKVVEALTKGNPNVSVESVILPDGEKYKDM 174

Query: 81  DTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGVSFIQIPTTVMAQVDSS 140
           DTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRG++FIQIPTTVMAQVDSS
Sbjct: 175 DTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGINFIQIPTTVMAQVDSS 234

Query: 141 VGGKTGINHRLGKNLIGAFYQPQCVLVDTDTLNTLPDRELASGLAEVIKYGLIRDAEFFE 200
           VGGKTGINH LGKNLIGAFYQPQCVL+DTDTLNTLPDRELASGLAEVIKYGLIRDAEFFE
Sbjct: 235 VGGKTGINHHLGKNLIGAFYQPQCVLIDTDTLNTLPDRELASGLAEVIKYGLIRDAEFFE 294

Query: 201 WQEQNMHKLMARDPRAFAYAIKRSCENKAEVVSLDEKESGLRATLNLGHTFGHAIETGFG 260
           WQE+N+  LMARDP A AYAIKRSCENKAEVVSLDEKESGLRATLNLGHTFGHAIETGFG
Sbjct: 295 WQEKNIQALMARDPNALAYAIKRSCENKAEVVSLDEKESGLRATLNLGHTFGHAIETGFG 354

Query: 261 YGQWLHGEAVAAGMVMAVDMSYRLGWIDDSIVKRVHNILQQAKLPTAPPDTMTVEMFKSI 320
           YGQWLHGEAVA GMVMAVDMSYRLGWIDDSIVKRVHNILQQAKLPT PP+ MTVEMFKS+
Sbjct: 355 YGQWLHGEAVAVGMVMAVDMSYRLGWIDDSIVKRVHNILQQAKLPTFPPEIMTVEMFKSV 414

Query: 321 MAVDKKVADGLLRLILLKGPLGNCVFTGDYDRKALDDTLYAFCK 364
           MAVDKKVADGLLRLILLKGPLGNCVFTGDYDRKALD+TL AF K
Sbjct: 415 MAVDKKVADGLLRLILLKGPLGNCVFTGDYDRKALDETLRAFVK 458

Source: Fagus sylvatica

Species: Fagus sylvatica

Genus: Fagus

Family: Fagaceae

Order: Fagales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224134046|ref|XP_002327742.1| 3-dehydroquinate synthase [Populus trichocarpa] gi|222836827|gb|EEE75220.1| 3-dehydroquinate synthase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|118485624|gb|ABK94662.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224134050|ref|XP_002327743.1| 3-dehydroquinate synthase [Populus trichocarpa] gi|222836828|gb|EEE75221.1| 3-dehydroquinate synthase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|222136863|gb|ACM45081.1| 3-dehydroquinate synthase [Vitis vinifera] Back     alignment and taxonomy information
>gi|147858670|emb|CAN82907.1| hypothetical protein VITISV_039705 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225431071|ref|XP_002263236.1| PREDICTED: 3-dehydroquinate synthase [Vitis vinifera] gi|297734973|emb|CBI17335.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449456829|ref|XP_004146151.1| PREDICTED: 3-dehydroquinate synthase-like [Cucumis sativus] gi|449495064|ref|XP_004159724.1| PREDICTED: 3-dehydroquinate synthase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356538307|ref|XP_003537645.1| PREDICTED: 3-dehydroquinate synthase-like [Glycine max] Back     alignment and taxonomy information
>gi|363807450|ref|NP_001242645.1| uncharacterized protein LOC100812989 [Glycine max] gi|255641607|gb|ACU21076.1| unknown [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query365
TAIR|locus:2156942442 AT5G66120 [Arabidopsis thalian 0.945 0.780 0.802 2.8e-146
UNIPROTKB|P07639362 aroB [Escherichia coli K-12 (t 0.8 0.806 0.557 5.8e-82
TIGR_CMR|SO_0287359 SO_0287 "3-dehydroquinate synt 0.832 0.846 0.527 3.2e-81
UNIPROTKB|Q9KNV2361 aroB "3-dehydroquinate synthas 0.794 0.803 0.540 7.9e-78
TIGR_CMR|VC_2628361 VC_2628 "3-dehydroquinate synt 0.794 0.803 0.540 7.9e-78
TIGR_CMR|GSU_2025362 GSU_2025 "3-dehydroquinate syn 0.808 0.814 0.503 1.2e-72
TIGR_CMR|CPS_0473354 CPS_0473 "3-dehydroquinate syn 0.827 0.853 0.470 1.1e-71
TIGR_CMR|CBU_1893360 CBU_1893 "3-dehydroquinate syn 0.835 0.847 0.458 2.4e-69
TIGR_CMR|SPO_1635370 SPO_1635 "3-dehydroquinate syn 0.890 0.878 0.434 3.5e-59
TIGR_CMR|CHY_0629529 CHY_0629 "shikimate kinase/3-d 0.772 0.533 0.446 5.3e-56
TAIR|locus:2156942 AT5G66120 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1429 (508.1 bits), Expect = 2.8e-146, P = 2.8e-146
 Identities = 277/345 (80%), Positives = 299/345 (86%)

Query:    21 LISNNCLYYRHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNM 80
             L+ ++ L  RHV GK+VLVVTN+ VAPLYLDK  DALTRGNPNV+VE+VILPDGE YK+M
Sbjct:    98 LLDHSELLQRHVHGKRVLVVTNDRVAPLYLDKTIDALTRGNPNVTVESVILPDGEKYKDM 157

Query:    81 DTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGVSFIQIPTTVMAQVDSS 140
             DTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV+FIQIPTTVMAQVDSS
Sbjct:   158 DTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGVNFIQIPTTVMAQVDSS 217

Query:   141 VGGKTGINHRLGKNLIGAFYQPQCVLVDTDTLNTLPDRELASGLAEVIKYGLIRDAEFFE 200
             VGGKTGINHRLGKNLIGAFYQPQCVLVDTDTLNTLPDRE+ASGLAEVIKYGLIRDAEFFE
Sbjct:   218 VGGKTGINHRLGKNLIGAFYQPQCVLVDTDTLNTLPDREMASGLAEVIKYGLIRDAEFFE 277

Query:   201 WQEQNMHKLMARDPRAFAYAIKRSCENKAEVVSLDEKESGLRATLNLGHTFGHAIETGFG 260
             WQE+N+  L+ARDP A A+AIKRSCENKA+VVS DEKESGLRATLNLGHTFGHAIETGFG
Sbjct:   278 WQEKNIEALLARDPAALAFAIKRSCENKADVVSQDEKESGLRATLNLGHTFGHAIETGFG 337

Query:   261 YGQWLHGEXXXXXXXXXXXXSYRLGWIDDSIVKRVHNILQQAKLPTAPPDTMTVEMFKSI 320
             YG+WLHGE            SYRLGWID+SIVKRV+ IL +AKLPT PP++MTV MFKSI
Sbjct:   338 YGEWLHGEAVAAGTVMAVDMSYRLGWIDESIVKRVNKILVRAKLPTTPPESMTVSMFKSI 397

Query:   321 MAVDKKVADXXXXXXXXXXXXXNCVFTGDYDRKALDDTLYAFCKS 365
             MAVDKKVAD             NCVFTGDYDR+ALD TL AF KS
Sbjct:   398 MAVDKKVADGLLRLILLKGPLGNCVFTGDYDREALDATLRAFSKS 442
GO:0003856 "3-dehydroquinate synthase activity" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISM;IEA
GO:0009073 "aromatic amino acid family biosynthetic process" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0006744 "ubiquinone biosynthetic process" evidence=RCA
GO:0005768 "endosome" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0005802 "trans-Golgi network" evidence=IDA
UNIPROTKB|P07639 aroB [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
TIGR_CMR|SO_0287 SO_0287 "3-dehydroquinate synthase" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms
UNIPROTKB|Q9KNV2 aroB "3-dehydroquinate synthase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] Back     alignment and assigned GO terms
TIGR_CMR|VC_2628 VC_2628 "3-dehydroquinate synthase" [Vibrio cholerae O1 biovar El Tor (taxid:686)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_2025 GSU_2025 "3-dehydroquinate synthase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
TIGR_CMR|CPS_0473 CPS_0473 "3-dehydroquinate synthase" [Colwellia psychrerythraea 34H (taxid:167879)] Back     alignment and assigned GO terms
TIGR_CMR|CBU_1893 CBU_1893 "3-dehydroquinate synthase" [Coxiella burnetii RSA 493 (taxid:227377)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_1635 SPO_1635 "3-dehydroquinate synthase" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
TIGR_CMR|CHY_0629 CHY_0629 "shikimate kinase/3-dehydroquinate synthase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q31DP9AROB_THICR4, ., 2, ., 3, ., 40.60520.92320.9413yesno
Q62GB0AROB_BURMA4, ., 2, ., 3, ., 40.57230.86300.8774yesno
A3P066AROB_BURP04, ., 2, ., 3, ., 40.57230.86300.8774yesno
B1YRS4AROB_BURA44, ., 2, ., 3, ., 40.55420.90950.9247yesno
B7IAV6AROB_ACIB54, ., 2, ., 3, ., 40.55280.89580.9083yesno
A1SB13AROB_SHEAM4, ., 2, ., 3, ., 40.58070.86840.8830yesno
Q1IGA7AROB_PSEE44, ., 2, ., 3, ., 40.59820.92050.9205yesno
Q1Q8Q9AROB_PSYCK4, ., 2, ., 3, ., 40.55310.88760.8780yesno
A4XPQ2AROB_PSEMY4, ., 2, ., 3, ., 40.61940.91500.9100yesno
A3MPY1AROB_BURM74, ., 2, ., 3, ., 40.57230.86300.8774yesno
Q21H84AROB_SACD24, ., 2, ., 3, ., 40.57220.91780.9254yesno
Q4KJI8AROB_PSEF54, ., 2, ., 3, ., 40.59230.92050.9180yesno
Q60BY2AROB_METCA4, ., 2, ., 3, ., 40.57840.92870.9442yesno
P34002AROB_PSEAE4, ., 2, ., 3, ., 40.58990.91500.9076yesno
B0V8M9AROB_ACIBY4, ., 2, ., 3, ., 40.55280.89580.9083yesno
Q0AJ12AROB_NITEC4, ., 2, ., 3, ., 40.59210.88760.8780yesno
B4E603AROB_BURCJ4, ., 2, ., 3, ., 40.55130.90950.9247yesno
Q39KC4AROB_BURS34, ., 2, ., 3, ., 40.55420.90950.9247yesno
Q0BJ01AROB_BURCM4, ., 2, ., 3, ., 40.55130.90950.9247yesno
A3NED2AROB_BURP64, ., 2, ., 3, ., 40.57230.86300.8774yesno
Q5P5P3AROB_AROAE4, ., 2, ., 3, ., 40.54060.92600.9388yesno
Q82TB9AROB_NITEU4, ., 2, ., 3, ., 40.60250.86020.8509yesno
Q02EX9AROB_PSEAB4, ., 2, ., 3, ., 40.58990.91500.9076yesno
A1V8D7AROB_BURMS4, ., 2, ., 3, ., 40.57230.86300.8774yesno
Q3JEG3AROB_NITOC4, ., 2, ., 3, ., 40.58110.91500.9303yesno
B7GVP5AROB_ACIB34, ., 2, ., 3, ., 40.55280.89580.9083yesno
C3KAI3AROB_PSEFS4, ., 2, ., 3, ., 40.58940.92050.9180yesno
Q3JMW1AROB_BURP14, ., 2, ., 3, ., 40.57230.86300.8774yesno
C5BRJ7AROB_TERTT4, ., 2, ., 3, ., 40.55960.94240.9529yesno
A2S718AROB_BURM94, ., 2, ., 3, ., 40.57230.86300.8774yesno
B1JU67AROB_BURCC4, ., 2, ., 3, ., 40.54540.90950.9247yesno
A6W2T3AROB_MARMS4, ., 2, ., 3, ., 40.54460.90950.9021yesno
Q48PH0AROB_PSE144, ., 2, ., 3, ., 40.58060.92050.9155yesno
Q4ZZE3AROB_PSEU24, ., 2, ., 3, ., 40.57770.92050.9155yesno
B1J2J5AROB_PSEPW4, ., 2, ., 3, ., 40.60410.92050.9205yesno
B8GPV3AROB_THISH4, ., 2, ., 3, ., 40.61350.91500.9252yesno
Q88CV2AROB_PSEPK4, ., 2, ., 3, ., 40.60110.92050.9205yesno
Q3SLY4AROB_THIDA4, ., 2, ., 3, ., 40.58710.88490.8997yesno
A0K3S0AROB_BURCH4, ., 2, ., 3, ., 40.54830.90950.9247yesno
A4JAT5AROB_BURVG4, ., 2, ., 3, ., 40.56910.86300.8774yesno
Q1BRZ3AROB_BURCA4, ., 2, ., 3, ., 40.54830.90950.9247yesno
B7V3D1AROB_PSEA84, ., 2, ., 3, ., 40.58700.91500.9076yesno
B3R7B8AROB_CUPTR4, ., 2, ., 3, ., 40.55050.90410.8967yesno
A8GZ30AROB_SHEPA4, ., 2, ., 3, ., 40.54860.91780.9331yesno
A6VDF9AROB_PSEA74, ., 2, ., 3, ., 40.58990.91500.9076yesno
A4VH14AROB_PSEU54, ., 2, ., 3, ., 40.58940.92050.9155yesno
Q3KJA1AROB_PSEPF4, ., 2, ., 3, ., 40.58940.92050.9180yesno
Q87V15AROB_PSESM4, ., 2, ., 3, ., 40.58060.92050.9155yesno
A5WAB1AROB_PSEP14, ., 2, ., 3, ., 40.59820.92050.9205yesno
Q63Q57AROB_BURPS4, ., 2, ., 3, ., 40.57230.86300.8774yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer4.2.3.40.946
3rd Layer4.2.30.963

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query365
PLN02834433 PLN02834, PLN02834, 3-dehydroquinate synthase 0.0
PRK00002358 PRK00002, aroB, 3-dehydroquinate synthase; Reviewe 0.0
cd08195345 cd08195, DHQS, Dehydroquinate synthase (DHQS) cata 0.0
COG0337360 COG0337, AroB, 3-dehydroquinate synthetase [Amino 1e-166
pfam01761259 pfam01761, DHQ_synthase, 3-dehydroquinate synthase 1e-152
TIGR01357344 TIGR01357, aroB, 3-dehydroquinate synthase 1e-137
cd08169344 cd08169, DHQ-like, Dehydroquinate synthase-like wh 1e-91
cd08197355 cd08197, DOIS, 2-deoxy-scyllo-inosose synthase (DO 2e-75
cd08198369 cd08198, DHQS-like2, Dehydroquinate synthase (DHQS 9e-64
PRK14021542 PRK14021, PRK14021, bifunctional shikimate kinase/ 2e-60
PRK06203389 PRK06203, aroB, 3-dehydroquinate synthase; Reviewe 5e-60
cd08196346 cd08196, DHQS-like1, Dehydroquinate synthase (DHQS 1e-56
cd08199354 cd08199, EEVS, 2-epi-5-epi-valiolone synthase (EEV 2e-55
PRK13951488 PRK13951, PRK13951, bifunctional shikimate kinase/ 3e-43
cd07766332 cd07766, DHQ_Fe-ADH, Dehydroquinate synthase-like 6e-28
COG0371360 COG0371, GldA, Glycerol dehydrogenase and related 3e-16
pfam13685247 pfam13685, Fe-ADH_2, Iron-containing alcohol dehyd 1e-15
cd08175348 cd08175, G1PDH, Glycerol-1-phosphate dehydrogenase 5e-14
cd08173339 cd08173, Gro1PDH, Sn-glycerol-1-phosphate dehydrog 4e-12
PRK00843350 PRK00843, egsA, NAD(P)-dependent glycerol-1-phosph 3e-10
cd08174331 cd08174, G1PDH-like, Glycerol-1-phosphate dehydrog 2e-07
cd08549332 cd08549, G1PDH_related, Glycerol-1-phosphate_dehyd 3e-07
pfam00465323 pfam00465, Fe-ADH, Iron-containing alcohol dehydro 7e-06
COG1454377 COG1454, EutG, Alcohol dehydrogenase, class IV [En 7e-06
cd08550349 cd08550, GlyDH-like, Glycerol_dehydrogenase-like 5e-04
>gnl|CDD|215448 PLN02834, PLN02834, 3-dehydroquinate synthase Back     alignment and domain information 
 Score =  694 bits (1793), Expect = 0.0
 Identities = 282/345 (81%), Positives = 314/345 (91%)

Query: 21  LISNNCLYYRHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNM 80
           L+ +  L  RHV GK+VLVVTN TVAPLYL+KV +ALT   P ++VE+VILPDGE YK+M
Sbjct: 87  LLDHGELLQRHVHGKRVLVVTNETVAPLYLEKVVEALTAKGPELTVESVILPDGEKYKDM 146

Query: 81  DTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGVSFIQIPTTVMAQVDSS 140
           +TLMKVFDKA+ESRLDRRCTFVALGGGVIGDMCG+AAASY RGV+F+QIPTTVMAQVDSS
Sbjct: 147 ETLMKVFDKALESRLDRRCTFVALGGGVIGDMCGFAAASYQRGVNFVQIPTTVMAQVDSS 206

Query: 141 VGGKTGINHRLGKNLIGAFYQPQCVLVDTDTLNTLPDRELASGLAEVIKYGLIRDAEFFE 200
           VGGKTG+NH LGKN+IGAFYQPQCVL+DTDTL TLPDRELASG+AEV+KYGLIRDAEFFE
Sbjct: 207 VGGKTGVNHPLGKNMIGAFYQPQCVLIDTDTLATLPDRELASGIAEVVKYGLIRDAEFFE 266

Query: 201 WQEQNMHKLMARDPRAFAYAIKRSCENKAEVVSLDEKESGLRATLNLGHTFGHAIETGFG 260
           WQE NM KL+ARDP A AYAIKRSCENKAEVVSLDEKESGLRATLNLGHTFGHAIETG G
Sbjct: 267 WQEANMEKLLARDPGALAYAIKRSCENKAEVVSLDEKESGLRATLNLGHTFGHAIETGPG 326

Query: 261 YGQWLHGEAVAAGMVMAVDMSYRLGWIDDSIVKRVHNILQQAKLPTAPPDTMTVEMFKSI 320
           YG+WLHGEAVAAG VMA DMSYRLGWID S+V R+  +L++AKLPT PP+ MTVEMFKS+
Sbjct: 327 YGEWLHGEAVAAGTVMAADMSYRLGWIDMSLVNRIFALLKRAKLPTNPPEKMTVEMFKSL 386

Query: 321 MAVDKKVADGLLRLILLKGPLGNCVFTGDYDRKALDDTLYAFCKS 365
           MAVDKKVADGLLRLILLKG LGNCVFTGD+DR+AL++TL AFCKS
Sbjct: 387 MAVDKKVADGLLRLILLKGELGNCVFTGDFDREALEETLRAFCKS 431

Length = 433
>gnl|CDD|234565 PRK00002, aroB, 3-dehydroquinate synthase; Reviewed Back     alignment and domain information
>gnl|CDD|173954 cd08195, DHQS, Dehydroquinate synthase (DHQS) catalyzes the conversion of DAHP to DHQ in shikimate pathway for aromatic compounds synthesis Back     alignment and domain information
>gnl|CDD|223414 COG0337, AroB, 3-dehydroquinate synthetase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|216685 pfam01761, DHQ_synthase, 3-dehydroquinate synthase Back     alignment and domain information
>gnl|CDD|233374 TIGR01357, aroB, 3-dehydroquinate synthase Back     alignment and domain information
>gnl|CDD|173928 cd08169, DHQ-like, Dehydroquinate synthase-like which includes dehydroquinate synthase, 2-deoxy-scyllo-inosose synthase, and 2-epi-5-epi-valiolone synthase Back     alignment and domain information
>gnl|CDD|173956 cd08197, DOIS, 2-deoxy-scyllo-inosose synthase (DOIS) catalyzes carbocycle formation from D-glucose-6-phosphate to 2-deoxy-scyllo-inosose through a multistep reaction in the biosynthesis of aminoglycoside antibiotics Back     alignment and domain information
>gnl|CDD|173957 cd08198, DHQS-like2, Dehydroquinate synthase (DHQS)-like Back     alignment and domain information
>gnl|CDD|184458 PRK14021, PRK14021, bifunctional shikimate kinase/3-dehydroquinate synthase; Provisional Back     alignment and domain information
>gnl|CDD|235740 PRK06203, aroB, 3-dehydroquinate synthase; Reviewed Back     alignment and domain information
>gnl|CDD|173955 cd08196, DHQS-like1, Dehydroquinate synthase (DHQS)-like Back     alignment and domain information
>gnl|CDD|173958 cd08199, EEVS, 2-epi-5-epi-valiolone synthase (EEVS) Back     alignment and domain information
>gnl|CDD|172457 PRK13951, PRK13951, bifunctional shikimate kinase/3-dehydroquinate synthase; Provisional Back     alignment and domain information
>gnl|CDD|173927 cd07766, DHQ_Fe-ADH, Dehydroquinate synthase-like (DHQ-like) and iron-containing alcohol dehydrogenases (Fe-ADH) Back     alignment and domain information
>gnl|CDD|223448 COG0371, GldA, Glycerol dehydrogenase and related enzymes [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|222318 pfam13685, Fe-ADH_2, Iron-containing alcohol dehydrogenase Back     alignment and domain information
>gnl|CDD|173934 cd08175, G1PDH, Glycerol-1-phosphate dehydrogenase (G1PDH) catalyzes the reversible reduction of dihydroxyacetone phosphate (DHAP) to glycerol-1-phosphate (G1P) in an NADH-dependent manner Back     alignment and domain information
>gnl|CDD|173932 cd08173, Gro1PDH, Sn-glycerol-1-phosphate dehydrogenase (Gro1PDH) catalyzes the reversible conversion between dihydroxyacetone phosphate and glycerol-1-phosphate using either NADH or NADPH as a coenzyme Back     alignment and domain information
>gnl|CDD|179139 PRK00843, egsA, NAD(P)-dependent glycerol-1-phosphate dehydrogenase; Reviewed Back     alignment and domain information
>gnl|CDD|173933 cd08174, G1PDH-like, Glycerol-1-phosphate dehydrogenase-like Back     alignment and domain information
>gnl|CDD|173959 cd08549, G1PDH_related, Glycerol-1-phosphate_dehydrogenase and related proteins Back     alignment and domain information
>gnl|CDD|215932 pfam00465, Fe-ADH, Iron-containing alcohol dehydrogenase Back     alignment and domain information
>gnl|CDD|224371 COG1454, EutG, Alcohol dehydrogenase, class IV [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|173960 cd08550, GlyDH-like, Glycerol_dehydrogenase-like Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 365
COG0337360 AroB 3-dehydroquinate synthetase [Amino acid trans 100.0
PLN02834433 3-dehydroquinate synthase 100.0
cd08197355 DOIS 2-deoxy-scyllo-inosose synthase (DOIS) cataly 100.0
cd08198369 DHQS-like2 Dehydroquinate synthase (DHQS)-like. DH 100.0
cd08195345 DHQS Dehydroquinate synthase (DHQS) catalyzes the 100.0
PRK00002358 aroB 3-dehydroquinate synthase; Reviewed 100.0
cd08196346 DHQS-like1 Dehydroquinate synthase (DHQS)-like. DH 100.0
cd08169344 DHQ-like Dehydroquinate synthase-like which includ 100.0
TIGR01357344 aroB 3-dehydroquinate synthase. This model represe 100.0
PRK14021542 bifunctional shikimate kinase/3-dehydroquinate syn 100.0
cd08199354 EEVS 2-epi-5-epi-valiolone synthase (EEVS). 2-epi- 100.0
PF01761260 DHQ_synthase: 3-dehydroquinate synthase; PDB: 3OKF 100.0
PRK06203389 aroB 3-dehydroquinate synthase; Reviewed 100.0
PRK13951488 bifunctional shikimate kinase/3-dehydroquinate syn 100.0
PRK00843350 egsA NAD(P)-dependent glycerol-1-phosphate dehydro 100.0
cd08549332 G1PDH_related Glycerol-1-phosphate_dehydrogenase a 100.0
COG1454377 EutG Alcohol dehydrogenase, class IV [Energy produ 100.0
cd08173339 Gro1PDH Sn-glycerol-1-phosphate dehydrogenase (Gro 100.0
cd07766332 DHQ_Fe-ADH Dehydroquinate synthase-like (DHQ-like) 100.0
cd08174331 G1PDH-like Glycerol-1-phosphate dehydrogenase-like 100.0
cd08175348 G1PDH Glycerol-1-phosphate dehydrogenase (G1PDH) c 100.0
PRK09860383 putative alcohol dehydrogenase; Provisional 100.0
PRK15454395 ethanol dehydrogenase EutG; Provisional 100.0
PRK10624382 L-1,2-propanediol oxidoreductase; Provisional 100.0
TIGR02638379 lactal_redase lactaldehyde reductase. This clade o 100.0
cd08179375 NADPH_BDH NADPH-dependent butanol dehydrogenase in 100.0
cd08176377 LPO Lactadehyde:propanediol oxidoreductase (LPO) c 100.0
cd08178398 AAD_C C-terminal alcohol dehydrogenase domain of t 100.0
cd08193376 HVD 5-hydroxyvalerate dehydrogenase (HVD) catalyze 100.0
cd08185380 Fe-ADH1 Iron-containing alcohol dehydrogenases-lik 100.0
TIGR03405355 Phn_Fe-ADH phosphonate metabolism-associated iron- 100.0
cd08180332 PDD 1,3-propanediol dehydrogenase (PPD) catalyzes 100.0
cd08182367 HEPD Hydroxyethylphosphoate dehydrogenase (HEPD) c 100.0
cd08189374 Fe-ADH5 Iron-containing alcohol dehydrogenases-lik 100.0
cd08187382 BDH Butanol dehydrogenase catalyzes the conversion 100.0
PRK09423366 gldA glycerol dehydrogenase; Provisional 100.0
cd08177337 MAR Maleylacetate reductase is involved in many ar 100.0
cd08192370 Fe-ADH7 Iron-containing alcohol dehydrogenases-lik 100.0
COG1979384 Uncharacterized oxidoreductases, Fe-dependent alco 100.0
cd08188377 Fe-ADH4 Iron-containing alcohol dehydrogenases-lik 100.0
cd08191386 HHD 6-hydroxyhexanoate dehydrogenase (HHD) catalyz 100.0
cd08186383 Fe-ADH8 Iron-containing alcohol dehydrogenase. Typ 100.0
cd08190414 HOT Hydroxyacid-oxoacid transhydrogenase (HOT) inv 100.0
cd08172347 GlyDH-like1 Glycerol dehydrogenases-like. Glycerol 100.0
cd08550349 GlyDH-like Glycerol_dehydrogenase-like. Families o 100.0
cd08181357 PPD-like 1,3-propanediol dehydrogenase-like (PPD). 100.0
cd08170351 GlyDH Glycerol dehydrogenases (GlyDH) catalyzes ox 100.0
cd08551370 Fe-ADH iron-containing alcohol dehydrogenases (Fe- 100.0
cd08194375 Fe-ADH6 Iron-containing alcohol dehydrogenases-lik 100.0
cd08183374 Fe-ADH2 Iron-containing alcohol dehydrogenases-lik 100.0
PRK15138387 aldehyde reductase; Provisional 100.0
COG0371360 GldA Glycerol dehydrogenase and related enzymes [E 100.0
cd08184347 Fe-ADH3 Iron-containing alcohol dehydrogenases-lik 100.0
PF00465366 Fe-ADH: Iron-containing alcohol dehydrogenase ; In 100.0
PRK13805862 bifunctional acetaldehyde-CoA/alcohol dehydrogenas 100.0
cd08171345 GlyDH-like2 Glycerol dehydrogenase-like. Glycerol 100.0
PRK10586362 putative oxidoreductase; Provisional 100.0
KOG3857465 consensus Alcohol dehydrogenase, class IV [Energy 100.0
PF13685250 Fe-ADH_2: Iron-containing alcohol dehydrogenase; P 100.0
PF00731150 AIRC: AIR carboxylase; InterPro: IPR000031 Phospho 96.74
KOG0692 595 consensus Pentafunctional AROM protein [Amino acid 96.7
TIGR01162156 purE phosphoribosylaminoimidazole carboxylase, Pur 96.32
COG0041162 PurE Phosphoribosylcarboxyaminoimidazole (NCAIR) m 95.2
PRK11914306 diacylglycerol kinase; Reviewed 93.63
PRK13337304 putative lipid kinase; Reviewed 93.24
PRK13054300 lipid kinase; Reviewed 92.88
TIGR00147293 lipid kinase, YegS/Rv2252/BmrU family. The E. coli 92.52
TIGR00237432 xseA exodeoxyribonuclease VII, large subunit. This 91.56
PLN02948577 phosphoribosylaminoimidazole carboxylase 91.42
PRK00286438 xseA exodeoxyribonuclease VII large subunit; Revie 90.46
PLN02958481 diacylglycerol kinase/D-erythro-sphingosine kinase 90.13
PF02601319 Exonuc_VII_L: Exonuclease VII, large subunit; Inte 89.81
COG1597301 LCB5 Sphingosine kinase and enzymes related to euk 89.78
PRK03202320 6-phosphofructokinase; Provisional 89.55
PF00781130 DAGK_cat: Diacylglycerol kinase catalytic domain; 88.99
PRK13055334 putative lipid kinase; Reviewed 88.68
COG3340224 PepE Peptidase E [Amino acid transport and metabol 88.53
PF06506176 PrpR_N: Propionate catabolism activator; InterPro: 88.4
TIGR02482301 PFKA_ATP 6-phosphofructokinase. 6-phosphofructokin 88.31
cd00763317 Bacterial_PFK Phosphofructokinase, a key regulator 88.22
COG1570440 XseA Exonuclease VII, large subunit [DNA replicati 87.19
PF00365282 PFK: Phosphofructokinase; InterPro: IPR000023 The 86.17
TIGR02483324 PFK_mixed phosphofructokinase. Members of this fam 86.05
cd00363338 PFK Phosphofructokinase, a key regulatory enzyme i 85.54
PRK14072416 6-phosphofructokinase; Provisional 85.38
PRK14071360 6-phosphofructokinase; Provisional 84.74
PF01513285 NAD_kinase: ATP-NAD kinase; InterPro: IPR002504 Me 84.63
PRK00861300 putative lipid kinase; Reviewed 84.44
TIGR03702293 lip_kinase_YegS lipid kinase YegS. Members of this 84.35
PRK13059295 putative lipid kinase; Reviewed 84.16
PRK06555403 pyrophosphate--fructose-6-phosphate 1-phosphotrans 83.84
PRK09590104 celB cellobiose phosphotransferase system IIB comp 83.83
PRK13057287 putative lipid kinase; Reviewed 83.67
COG0205347 PfkA 6-phosphofructokinase [Carbohydrate transport 82.19
PRK01231295 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 82.05
COG3199355 Predicted inorganic polyphosphate/ATP-NAD kinase [ 81.67
PRK02155291 ppnK NAD(+)/NADH kinase family protein; Provisiona 81.59
COG2515323 Acd 1-aminocyclopropane-1-carboxylate deaminase [A 80.45
>COG0337 AroB 3-dehydroquinate synthetase [Amino acid transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=2.1e-77  Score=565.32  Aligned_cols=348  Identities=55%  Similarity=0.878  Sum_probs=328.2

Q ss_pred             ccccceeeecccch--hhhhccCCceEEEEEccCchHHHHHHHHHHHhhCCCCceEEEEEeCCCCCCCCHHHHHHHHHHH
Q 017815           13 FGNSDTLLLISNNC--LYYRHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKA   90 (365)
Q Consensus        13 ~~~~~~~~~~~~~~--~l~~~~~~~~~livtd~~~~~~~~~~v~~~L~~~g~~i~v~~~~~~~~e~~~~~~~v~~~~~~~   90 (365)
                      ..+-++.+|.+..+  .+.++..++|++||+|+++.+.+.+++...|...|  +.+..+++|+||..||++++.++++++
T Consensus        10 ~~~y~I~ig~gl~~~~~l~~~~~~~k~~ivtd~~v~~~y~~~~~~~l~~~g--~~v~~~~lp~GE~~Ksl~~~~~i~~~l   87 (360)
T COG0337          10 ERSYPIYIGSGLLSDAELAELLAGRKVAIVTDETVAPLYLEKLLATLEAAG--VEVDSIVLPDGEEYKSLETLEKIYDAL   87 (360)
T ss_pred             CCceeEEEeCCcccchhhhhhccCCeEEEEECchhHHHHHHHHHHHHHhcC--CeeeEEEeCCCcccccHHHHHHHHHHH
Confidence            34556889998866  66666567899999999999999999999999999  787778999999999999999999999


Q ss_pred             HHcCCCCcceEEEecCchHhhHHHHHHHHhhcCCcEEEeccccccccccccCCceEEecCCCcceeeccCCccEEEEehh
Q 017815           91 IESRLDRRCTFVALGGGVIGDMCGYAAASYLRGVSFIQIPTTVMAQVDSSVGGKTGINHRLGKNLIGAFYQPQCVLVDTD  170 (365)
Q Consensus        91 ~~~~~dr~~~IIaiGGGsv~D~ak~vA~~~~~g~p~i~IPTTl~A~~~s~~~~~~~i~~~~~k~~~~~~~~P~~viiD~~  170 (365)
                      .+.+++|+|.|||+|||.+.|+++|+|++|+||+++|+|||||+||+||++|+|++||++.+||++|+||+|++|++||+
T Consensus        88 l~~~~~R~s~iialGGGvigDlaGF~Aaty~RGv~fiqiPTTLLAqVDSSVGGKtgIN~~~gKNmIGaF~qP~aVi~D~~  167 (360)
T COG0337          88 LEAGLDRKSTLIALGGGVIGDLAGFAAATYMRGVRFIQIPTTLLAQVDSSVGGKTGINHPLGKNLIGAFYQPKAVLIDTD  167 (360)
T ss_pred             HHcCCCCCcEEEEECChHHHHHHHHHHHHHHcCCCeEeccchHHHHhhcccccccccCCCCCcceeecccCCcEEEEchH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhCCCCHHHHHhcHHHHHHHHHccChhHHHHHHHhhhhhhcCCHHHHHHHHHHHHHhhHhhhhcchhhhccccccCcchh
Q 017815          171 TLNTLPDRELASGLAEVIKYGLIRDAEFFEWQEQNMHKLMARDPRAFAYAIKRSCENKAEVVSLDEKESGLRATLNLGHT  250 (365)
Q Consensus       171 l~~tlP~~~~~sG~~D~lkha~~~d~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~v~~d~~~~g~r~~l~~gH~  250 (365)
                      ++.|||+|.+++|++|++||+++.|..+|+|++++.+.+.+.+. .+.++|.+||+.|.++|.+|++|.|+|+.||+|||
T Consensus       168 ~L~TLp~re~~~G~AEvIK~g~I~D~~~f~~Le~~~~~l~~~~~-~l~~~I~rs~~~Ka~VV~~De~E~G~R~~LN~GHT  246 (360)
T COG0337         168 FLKTLPPRELRAGMAEVIKYGLIADPEFFDWLEENLDALLALDP-ALEELIARSCQIKAEVVAQDEKESGLRAILNLGHT  246 (360)
T ss_pred             HhccCCHHHHHHhHHHHHHHhhhcCHHHHHHHHHHHHHHHhcch-HHHHHHHHHHHHhhHHhhcCccchhhHHHHhcchH
Confidence            99999999999999999999999999999999988655554444 48899999999999999999999999999999999


Q ss_pred             HHHHhhhccCCCCCCcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccccCC
Q 017815          251 FGHAIETGFGYGQWLHGEAVAAGMVMAVDMSYRLGWIDDSIVKRVHNILQQAKLPTAPPDTMTVEMFKSIMAVDKKVADG  330 (365)
Q Consensus       251 ~~Hale~~~~~~~~~HG~~vaig~~~~~~l~~~~g~~~~~~~~~i~~ll~~lglp~~~~~~i~~~~~~~~l~~dkk~~~~  330 (365)
                      |+||+|+.++|..++||||||+||.+++++|+++|+++.+.++|+..+++++|+|+++++..+.+.+++.|..|||++++
T Consensus       247 ~GHAiE~~~~y~~~~HGeAVaiGmv~aa~ls~~lG~~~~~~~~r~~~~L~~~gLP~~~~~~~~~~~l~~~m~~DKK~~~g  326 (360)
T COG0337         247 FGHAIEALTGYGKWLHGEAVAIGMVMAARLSERLGLLDKADAERILNLLKRYGLPTSLPDELDAEKLLEAMARDKKVLGG  326 (360)
T ss_pred             HHHHHHHHhCCCccchHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCCccCCCcCCHHHHHHHHhhcccccCC
Confidence            99999999988669999999999999999999999999999999999999999999998667899999999999999999


Q ss_pred             eEEEEeeCCCCcceEEccCCCHHHHHHHHHHHhc
Q 017815          331 LLRLILLKGPLGNCVFTGDYDRKALDDTLYAFCK  364 (365)
Q Consensus       331 ~~~~~l~~~~~g~~~~~~~~~~~~l~~~~~~~~~  364 (365)
                      +++||+|++ ||++....+++++++.++++++++
T Consensus       327 ~i~~vl~~~-iG~~~~~~~v~~~~l~~~l~~~~~  359 (360)
T COG0337         327 KIRFVLLKE-IGKAEIAEGVDEELLLDALEEVHA  359 (360)
T ss_pred             ceEEEeehh-cCceEeecCCCHHHHHHHHHHHhc
Confidence            999999999 999999978999999999999875

>PLN02834 3-dehydroquinate synthase Back     alignment and domain information
>cd08197 DOIS 2-deoxy-scyllo-inosose synthase (DOIS) catalyzes carbocycle formation from D-glucose-6-phosphate to 2-deoxy-scyllo-inosose through a multistep reaction in the biosynthesis of aminoglycoside antibiotics Back     alignment and domain information
>cd08198 DHQS-like2 Dehydroquinate synthase (DHQS)-like Back     alignment and domain information
>cd08195 DHQS Dehydroquinate synthase (DHQS) catalyzes the conversion of DAHP to DHQ in shikimate pathway for aromatic compounds synthesis Back     alignment and domain information
>PRK00002 aroB 3-dehydroquinate synthase; Reviewed Back     alignment and domain information
>cd08196 DHQS-like1 Dehydroquinate synthase (DHQS)-like Back     alignment and domain information
>cd08169 DHQ-like Dehydroquinate synthase-like which includes dehydroquinate synthase, 2-deoxy-scyllo-inosose synthase, and 2-epi-5-epi-valiolone synthase Back     alignment and domain information
>TIGR01357 aroB 3-dehydroquinate synthase Back     alignment and domain information
>PRK14021 bifunctional shikimate kinase/3-dehydroquinate synthase; Provisional Back     alignment and domain information
>cd08199 EEVS 2-epi-5-epi-valiolone synthase (EEVS) Back     alignment and domain information
>PF01761 DHQ_synthase: 3-dehydroquinate synthase; PDB: 3OKF_A 1NVA_B 1NUA_A 1NVE_D 1NVB_B 1SG6_A 1NR5_A 1NRX_B 1NVD_A 1NVF_C Back     alignment and domain information
>PRK06203 aroB 3-dehydroquinate synthase; Reviewed Back     alignment and domain information
>PRK13951 bifunctional shikimate kinase/3-dehydroquinate synthase; Provisional Back     alignment and domain information
>PRK00843 egsA NAD(P)-dependent glycerol-1-phosphate dehydrogenase; Reviewed Back     alignment and domain information
>cd08549 G1PDH_related Glycerol-1-phosphate_dehydrogenase and related proteins Back     alignment and domain information
>COG1454 EutG Alcohol dehydrogenase, class IV [Energy production and conversion] Back     alignment and domain information
>cd08173 Gro1PDH Sn-glycerol-1-phosphate dehydrogenase (Gro1PDH) catalyzes the reversible conversion between dihydroxyacetone phosphate and glycerol-1-phosphate using either NADH or NADPH as a coenzyme Back     alignment and domain information
>cd07766 DHQ_Fe-ADH Dehydroquinate synthase-like (DHQ-like) and iron-containing alcohol dehydrogenases (Fe-ADH) Back     alignment and domain information
>cd08174 G1PDH-like Glycerol-1-phosphate dehydrogenase-like Back     alignment and domain information
>cd08175 G1PDH Glycerol-1-phosphate dehydrogenase (G1PDH) catalyzes the reversible reduction of dihydroxyacetone phosphate (DHAP) to glycerol-1-phosphate (G1P) in an NADH-dependent manner Back     alignment and domain information
>PRK09860 putative alcohol dehydrogenase; Provisional Back     alignment and domain information
>PRK15454 ethanol dehydrogenase EutG; Provisional Back     alignment and domain information
>PRK10624 L-1,2-propanediol oxidoreductase; Provisional Back     alignment and domain information
>TIGR02638 lactal_redase lactaldehyde reductase Back     alignment and domain information
>cd08179 NADPH_BDH NADPH-dependent butanol dehydrogenase involved in the butanol and ethanol formation pathway in bacteria Back     alignment and domain information
>cd08176 LPO Lactadehyde:propanediol oxidoreductase (LPO) catalyzes the interconversion between L-lactaldehyde and L-1,2-propanediol in Escherichia coli and other enterobacteria Back     alignment and domain information
>cd08178 AAD_C C-terminal alcohol dehydrogenase domain of the acetaldehyde dehydrogenase-alcohol dehydrogenase bifunctional two-domain protein (AAD) Back     alignment and domain information
>cd08193 HVD 5-hydroxyvalerate dehydrogenase (HVD) catalyzes the oxidation of 5-hydroxyvalerate to 5-oxovalerate with NAD+ as cofactor Back     alignment and domain information
>cd08185 Fe-ADH1 Iron-containing alcohol dehydrogenases-like Back     alignment and domain information
>TIGR03405 Phn_Fe-ADH phosphonate metabolism-associated iron-containing alcohol dehydrogenase Back     alignment and domain information
>cd08180 PDD 1,3-propanediol dehydrogenase (PPD) catalyzes the reduction of 3-hydroxypropionaldehyde (3-HPA) to 1,3-propanediol in glycerol metabolism Back     alignment and domain information
>cd08182 HEPD Hydroxyethylphosphoate dehydrogenase (HEPD) catalyzes the reduction of phosphonoacetaldehyde (PnAA) to hydroxyethylphosphoate (HEP) Back     alignment and domain information
>cd08189 Fe-ADH5 Iron-containing alcohol dehydrogenases-like Back     alignment and domain information
>cd08187 BDH Butanol dehydrogenase catalyzes the conversion of butyraldehyde to butanol with the cofactor NAD(P)H being oxidized in the process Back     alignment and domain information
>PRK09423 gldA glycerol dehydrogenase; Provisional Back     alignment and domain information
>cd08177 MAR Maleylacetate reductase is involved in many aromatic compounds degradation pathways of aerobic microbes Back     alignment and domain information
>cd08192 Fe-ADH7 Iron-containing alcohol dehydrogenases-like, involved in the linear alkylbenzenesulfonate (LAS) degradation pathway Back     alignment and domain information
>COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family [Energy production and conversion] Back     alignment and domain information
>cd08188 Fe-ADH4 Iron-containing alcohol dehydrogenases-like Back     alignment and domain information
>cd08191 HHD 6-hydroxyhexanoate dehydrogenase (HHD) catalyzes the oxidation of 6-hydroxyhexanoate to 6-oxohexanoate Back     alignment and domain information
>cd08186 Fe-ADH8 Iron-containing alcohol dehydrogenase Back     alignment and domain information
>cd08190 HOT Hydroxyacid-oxoacid transhydrogenase (HOT) involved in gamma-hydroxybutyrate metabolism Back     alignment and domain information
>cd08172 GlyDH-like1 Glycerol dehydrogenases-like Back     alignment and domain information
>cd08550 GlyDH-like Glycerol_dehydrogenase-like Back     alignment and domain information
>cd08181 PPD-like 1,3-propanediol dehydrogenase-like (PPD) Back     alignment and domain information
>cd08170 GlyDH Glycerol dehydrogenases (GlyDH) catalyzes oxidation of glycerol to dihydroxyacetone in glycerol dissmilation Back     alignment and domain information
>cd08551 Fe-ADH iron-containing alcohol dehydrogenases (Fe-ADH)-like Back     alignment and domain information
>cd08194 Fe-ADH6 Iron-containing alcohol dehydrogenases-like Back     alignment and domain information
>cd08183 Fe-ADH2 Iron-containing alcohol dehydrogenases-like Back     alignment and domain information
>PRK15138 aldehyde reductase; Provisional Back     alignment and domain information
>COG0371 GldA Glycerol dehydrogenase and related enzymes [Energy production and conversion] Back     alignment and domain information
>cd08184 Fe-ADH3 Iron-containing alcohol dehydrogenases-like Back     alignment and domain information
>PF00465 Fe-ADH: Iron-containing alcohol dehydrogenase ; InterPro: IPR001670 Alcohol dehydrogenase (1 Back     alignment and domain information
>PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional Back     alignment and domain information
>cd08171 GlyDH-like2 Glycerol dehydrogenase-like Back     alignment and domain information
>PRK10586 putative oxidoreductase; Provisional Back     alignment and domain information
>KOG3857 consensus Alcohol dehydrogenase, class IV [Energy production and conversion] Back     alignment and domain information
>PF13685 Fe-ADH_2: Iron-containing alcohol dehydrogenase; PDB: 3CE9_C Back     alignment and domain information
>PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE Back     alignment and domain information
>KOG0692 consensus Pentafunctional AROM protein [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR01162 purE phosphoribosylaminoimidazole carboxylase, PurE protein Back     alignment and domain information
>COG0041 PurE Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK11914 diacylglycerol kinase; Reviewed Back     alignment and domain information
>PRK13337 putative lipid kinase; Reviewed Back     alignment and domain information
>PRK13054 lipid kinase; Reviewed Back     alignment and domain information
>TIGR00147 lipid kinase, YegS/Rv2252/BmrU family Back     alignment and domain information
>TIGR00237 xseA exodeoxyribonuclease VII, large subunit Back     alignment and domain information
>PLN02948 phosphoribosylaminoimidazole carboxylase Back     alignment and domain information
>PRK00286 xseA exodeoxyribonuclease VII large subunit; Reviewed Back     alignment and domain information
>PLN02958 diacylglycerol kinase/D-erythro-sphingosine kinase Back     alignment and domain information
>PF02601 Exonuc_VII_L: Exonuclease VII, large subunit; InterPro: IPR020579 Exonuclease VII 3 Back     alignment and domain information
>COG1597 LCB5 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only] Back     alignment and domain information
>PRK03202 6-phosphofructokinase; Provisional Back     alignment and domain information
>PF00781 DAGK_cat: Diacylglycerol kinase catalytic domain; InterPro: IPR001206 The DAG-kinase catalytic domain or DAGKc domain is present in mammalian lipid kinases, such as diacylglycerol (DAG), ceramide and sphingosine kinases, as well as in related bacterial proteins [, ] Back     alignment and domain information
>PRK13055 putative lipid kinase; Reviewed Back     alignment and domain information
>COG3340 PepE Peptidase E [Amino acid transport and metabolism] Back     alignment and domain information
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions [] Back     alignment and domain information
>TIGR02482 PFKA_ATP 6-phosphofructokinase Back     alignment and domain information
>cd00763 Bacterial_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>COG1570 XseA Exonuclease VII, large subunit [DNA replication, recombination, and repair] Back     alignment and domain information
>PF00365 PFK: Phosphofructokinase; InterPro: IPR000023 The enzyme-catalysed transfer of a phosphoryl group from ATP is an important reaction in a wide variety of biological processes [] Back     alignment and domain information
>TIGR02483 PFK_mixed phosphofructokinase Back     alignment and domain information
>cd00363 PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>PRK14072 6-phosphofructokinase; Provisional Back     alignment and domain information
>PRK14071 6-phosphofructokinase; Provisional Back     alignment and domain information
>PF01513 NAD_kinase: ATP-NAD kinase; InterPro: IPR002504 Members of this family are ATP-NAD kinases 2 Back     alignment and domain information
>PRK00861 putative lipid kinase; Reviewed Back     alignment and domain information
>TIGR03702 lip_kinase_YegS lipid kinase YegS Back     alignment and domain information
>PRK13059 putative lipid kinase; Reviewed Back     alignment and domain information
>PRK06555 pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Validated Back     alignment and domain information
>PRK09590 celB cellobiose phosphotransferase system IIB component; Reviewed Back     alignment and domain information
>PRK13057 putative lipid kinase; Reviewed Back     alignment and domain information
>COG0205 PfkA 6-phosphofructokinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK01231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>COG3199 Predicted inorganic polyphosphate/ATP-NAD kinase [General function prediction only] Back     alignment and domain information
>PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional Back     alignment and domain information
>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query365
3okf_A390 2.5 Angstrom Resolution Crystal Structure Of 3-Dehy 1e-86
3clh_A343 Crystal Structure Of 3-Dehydroquinate Synthase (Dhq 9e-52
3qbd_A368 3-Dehydroquinate Synthase (Arob) From Mycobacterium 7e-47
1dqs_A393 Crystal Structure Of Dehydroquinate Synthase (Dhqs) 7e-43
1xag_A354 Crystal Structure Of Staphlyococcus Aureus 3-Dehydr 2e-42
1ujn_A348 Crystal Structure Of Dehydroquinate Synthase From T 3e-30
2d2x_A368 Crystal Structure Of 2-Deoxy-Scyllo-Inosose Synthas 3e-28
3ce9_A354 Crystal Structure Of Glycerol Dehydrogenase (Np_348 7e-04
>pdb|3OKF|A Chain A, 2.5 Angstrom Resolution Crystal Structure Of 3-Dehydroquinate Synthase (Arob) From Vibrio Cholerae Length = 390 Back     alignment and structure 
Iteration: 1

 Score =  316 bits (809), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 159/294 (54%), Positives = 195/294 (66%), Gaps = 4/294 (1%)
Query: 35  KKVLVVTNNTVAPLYLDKVTDALTR-GNPNVSVENVILPDGENYKNMDTLMKVFDKAIES 93
           +KV++VTN+TVAPLY   +   L   G  +  +E   LPDGE YK ++T   V    +E 
Sbjct: 63  QKVVIVTNHTVAPLYAPAIISLLDHIGCQHALLE---LPDGEQYKTLETFNTVMSFLLEH 119
Query: 94  RLDRRCTFVALGGGVIGDMCGYAAASYLRGVSFIQIPTTVMAQVDSSVGGKTGINHRLGK 153
              R    +ALGGGVIGD+ G+AAA Y RGV FIQIPTT+++QVDSSVGGKT +NH LGK
Sbjct: 120 NYSRDVVVIALGGGVIGDLVGFAAACYQRGVDFIQIPTTLLSQVDSSVGGKTAVNHPLGK 179
Query: 154 NLIGAFYQPQCVLVDTDTLNTLPDRELASGLAEVIKYGLIRDAEFFEWQEQNMHKLMARD 213
           N+IGAFYQP+ V++DTD L TLP RE A+G+AEVIKYG+I D+ FF+W E  M  L A D
Sbjct: 180 NMIGAFYQPKAVVIDTDCLTTLPAREFAAGMAEVIKYGIIYDSAFFDWLEAQMEALYALD 239
Query: 214 PRAFAYAIKRSCENKAEVVSLDEKESGLRATLNLGHTFGHAIETGFGYGQWLHGEXXXXX 273
            +A  YAI R C+ KAEVV+ DEKESG+RA LNLGHTFGHAIE   GYG WLHGE     
Sbjct: 240 EQALTYAIARCCQIKAEVVAQDEKESGIRALLNLGHTFGHAIEAHMGYGNWLHGEAVSAG 299
Query: 274 XXXXXXXSYRLGWIDDSIVKRVHNILQQAKLPTAPPDTMTVEMFKSIMAVDKKV 327
                  +   G ID S  +R+  IL++A LP   P+ MT   F   M  DKKV
Sbjct: 300 TVMAAKTAQLQGLIDASQFERILAILKKAHLPVRTPENMTFADFMQHMMRDKKV 353
>pdb|3CLH|A Chain A, Crystal Structure Of 3-Dehydroquinate Synthase (Dhqs)from Helicobacter Pylori Length = 343 Back     alignment and structure
>pdb|3QBD|A Chain A, 3-Dehydroquinate Synthase (Arob) From Mycobacterium Tuberculosis In Complex With Nad Length = 368 Back     alignment and structure
>pdb|1DQS|A Chain A, Crystal Structure Of Dehydroquinate Synthase (Dhqs) Complexed With Carbaphosphonate, Nad+ And Zn2+ Length = 393 Back     alignment and structure
>pdb|1XAG|A Chain A, Crystal Structure Of Staphlyococcus Aureus 3-Dehydroquinate Synthase (Dhqs) In Complex With Zn2+, Nad+ And Carbaphosphonate Length = 354 Back     alignment and structure
>pdb|1UJN|A Chain A, Crystal Structure Of Dehydroquinate Synthase From Thermus Thermophilus Hb8 Length = 348 Back     alignment and structure
>pdb|2D2X|A Chain A, Crystal Structure Of 2-Deoxy-Scyllo-Inosose Synthase Length = 368 Back     alignment and structure
>pdb|3CE9|A Chain A, Crystal Structure Of Glycerol Dehydrogenase (Np_348253.1) From Clostridium Acetobutylicum At 2.37 A Resolution Length = 354 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query365
3okf_A390 3-dehydroquinate synthase; structural genomics, ce 0.0
2gru_A368 2-deoxy-scyllo-inosose synthase; aminoglycoside, 2 0.0
3clh_A343 3-dehydroquinate synthase; shikimate pathway, arom 0.0
3qbe_A368 3-dehydroquinate synthase; shikimate pathway, myco 0.0
1xah_A354 Sadhqs, 3-dehydroquinate synthase; shikimate pathw 0.0
1sg6_A393 Pentafunctional AROM polypeptide; shikimate pathwa 0.0
1ujn_A348 Dehydroquinate synthase; riken structu genomics/pr 1e-175
3ce9_A354 Glycerol dehydrogenase; NP_348253.1, 3-dehydroquin 2e-36
1ta9_A450 Glycerol dehydrogenase; oxidoredu; 1.90A {Schizosa 5e-27
1jq5_A370 Glycerol dehydrogenase; oxidoreductase, NAD, glyce 1e-16
3uhj_A387 Probable glycerol dehydrogenase; structural genomi 5e-15
1kq3_A376 Glycerol dehydrogenase; structural genomics, joint 2e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-07
>3okf_A 3-dehydroquinate synthase; structural genomics, center for structural genomics of infec diseases, csgid, NAD, lyase; HET: NAD; 2.50A {Vibrio cholerae o1 biovar eltor} Length = 390 Back     alignment and structure
 Score =  560 bits (1444), Expect = 0.0
 Identities = 172/342 (50%), Positives = 215/342 (62%), Gaps = 4/342 (1%)

Query: 24  NNCLYYRHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTL 83
            N         +KV++VTN+TVAPLY   +   L           + LPDGE YK ++T 
Sbjct: 52  ANPALLSLSAKQKVVIVTNHTVAPLYAPAIISLLDHIG--CQHALLELPDGEQYKTLETF 109

Query: 84  MKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGVSFIQIPTTVMAQVDSSVGG 143
             V    +E    R    +ALGGGVIGD+ G+AAA Y RGV FIQIPTT+++QVDSSVGG
Sbjct: 110 NTVMSFLLEHNYSRDVVVIALGGGVIGDLVGFAAACYQRGVDFIQIPTTLLSQVDSSVGG 169

Query: 144 KTGINHRLGKNLIGAFYQPQCVLVDTDTLNTLPDRELASGLAEVIKYGLIRDAEFFEWQE 203
           KT +NH LGKN+IGAFYQP+ V++DTD L TLP RE A+G+AEVIKYG+I D+ FF+W E
Sbjct: 170 KTAVNHPLGKNMIGAFYQPKAVVIDTDCLTTLPAREFAAGMAEVIKYGIIYDSAFFDWLE 229

Query: 204 QNMHKLMARDPRAFAYAIKRSCENKAEVVSLDEKESGLRATLNLGHTFGHAIETGFGYGQ 263
             M  L A D +A  YAI R C+ KAEVV+ DEKESG+RA LNLGHTFGHAIE   GYG 
Sbjct: 230 AQMEALYALDEQALTYAIARCCQIKAEVVAQDEKESGIRALLNLGHTFGHAIEAHMGYGN 289

Query: 264 WLHGEAVAAGMVMAVDMSYRLGWIDDSIVKRVHNILQQAKLPTAPPDTMTVEMFKSIMAV 323
           WLHGEAV+AG VMA   +   G ID S  +R+  IL++A LP   P+ MT   F   M  
Sbjct: 290 WLHGEAVSAGTVMAAKTAQLQGLIDASQFERILAILKKAHLPVRTPENMTFADFMQHMMR 349

Query: 324 DKKVADGLLRLILLKGPLGNCVFTGDYDRKALDDTLYAFCKS 365
           DKKV  G LRL+L    +G            +   +  +C++
Sbjct: 350 DKKVLAGELRLVLPTS-IGTSAVVKGVPEAVIAQAI-EYCRT 389
>2gru_A 2-deoxy-scyllo-inosose synthase; aminoglycoside, 2-deoxystreptamine, dehydroquinate synthase, lyase; HET: NAD EXO CAK; 2.15A {Bacillus circulans} PDB: 2d2x_A* Length = 368 Back     alignment and structure
>3clh_A 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, DHQS, amino-acid biosynthesis, cytoplasm, lyase, NAD; HET: NAD; 2.40A {Helicobacter pylori} Length = 343 Back     alignment and structure
>3qbe_A 3-dehydroquinate synthase; shikimate pathway, mycobacte tuberculosis, nicotinamide adenine dinucleotide (NAD)-depen enzyme; 2.07A {Mycobacterium tuberculosis} PDB: 3qbd_A Length = 368 Back     alignment and structure
>1xah_A Sadhqs, 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, open form, form B, domain movement, cyclase; HET: NAD; 2.20A {Staphylococcus aureus} PDB: 1xag_A* 1xai_A* 1xaj_A* 1xal_A* Length = 354 Back     alignment and structure
>1sg6_A Pentafunctional AROM polypeptide; shikimate pathway, aromatic amino acid biosynthesis, DHQS, O form J, domain movement, cyclase, lyase; HET: NAD; 1.70A {Emericella nidulans} SCOP: e.22.1.1 PDB: 1nr5_A* 1nrx_A* 1nua_A 1nva_A* 1nvb_A* 1nvd_A* 1nve_A* 1nvf_A* 1dqs_A* Length = 393 Back     alignment and structure
>1ujn_A Dehydroquinate synthase; riken structu genomics/proteomics initiative, RSGI, structural genomics,; 1.80A {Thermus thermophilus} SCOP: e.22.1.1 Length = 348 Back     alignment and structure
>3ce9_A Glycerol dehydrogenase; NP_348253.1, 3-dehydroquinate syntha structural genomics, joint center for structural genomics; HET: MSE; 2.37A {Clostridium acetobutylicum atcc 824} Length = 354 Back     alignment and structure
>1ta9_A Glycerol dehydrogenase; oxidoredu; 1.90A {Schizosaccharomyces pombe} Length = 450 Back     alignment and structure
>1jq5_A Glycerol dehydrogenase; oxidoreductase, NAD, glycerol metabolism; HET: NAD; 1.70A {Geobacillus stearothermophilus} SCOP: e.22.1.2 PDB: 1jpu_A* 1jqa_A* Length = 370 Back     alignment and structure
>3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti} Length = 387 Back     alignment and structure
>1kq3_A Glycerol dehydrogenase; structural genomics, joint center FO structural genomics, JCSG, protein structure initiative, PS oxidoreductase; 1.50A {Thermotoga maritima} SCOP: e.22.1.2 Length = 376 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query365
3okf_A390 3-dehydroquinate synthase; structural genomics, ce 100.0
3qbe_A368 3-dehydroquinate synthase; shikimate pathway, myco 100.0
2gru_A368 2-deoxy-scyllo-inosose synthase; aminoglycoside, 2 100.0
3clh_A343 3-dehydroquinate synthase; shikimate pathway, arom 100.0
1sg6_A393 Pentafunctional AROM polypeptide; shikimate pathwa 100.0
1xah_A354 Sadhqs, 3-dehydroquinate synthase; shikimate pathw 100.0
1ujn_A348 Dehydroquinate synthase; riken structu genomics/pr 100.0
3bfj_A387 1,3-propanediol oxidoreductase; opportunistic path 100.0
1rrm_A386 Lactaldehyde reductase; structural genomics, dehyd 100.0
3ce9_A354 Glycerol dehydrogenase; NP_348253.1, 3-dehydroquin 100.0
1jq5_A370 Glycerol dehydrogenase; oxidoreductase, NAD, glyce 100.0
1vlj_A407 NADH-dependent butanol dehydrogenase; TM0820, stru 100.0
3ox4_A383 Alcohol dehydrogenase 2; iron, NAD, oxidoreductase 100.0
1oj7_A408 Hypothetical oxidoreductase YQHD; structural genom 100.0
1o2d_A371 Alcohol dehydrogenase, iron-containing; TM0920, st 100.0
3jzd_A358 Iron-containing alcohol dehydrogenase; YP_298327.1 100.0
3hl0_A353 Maleylacetate reductase; structur genomics, PSI-2, 100.0
3uhj_A387 Probable glycerol dehydrogenase; structural genomi 100.0
1kq3_A376 Glycerol dehydrogenase; structural genomics, joint 100.0
1ta9_A450 Glycerol dehydrogenase; oxidoredu; 1.90A {Schizosa 100.0
3iv7_A364 Alcohol dehydrogenase IV; NP_602249.1, iron-contai 100.0
3rf7_A375 Iron-containing alcohol dehydrogenase; structural 100.0
3trh_A169 Phosphoribosylaminoimidazole carboxylase carboxylt 96.48
3lp6_A174 Phosphoribosylaminoimidazole carboxylase catalyti; 96.43
3oow_A166 Phosphoribosylaminoimidazole carboxylase,catalyic; 96.37
3ors_A163 N5-carboxyaminoimidazole ribonucleotide mutase; is 96.29
3kuu_A174 Phosphoribosylaminoimidazole carboxylase catalyti 96.23
3rg8_A159 Phosphoribosylaminoimidazole carboxylase, PURE PR; 96.19
1u11_A182 PURE (N5-carboxyaminoimidazole ribonucleotide MUT; 96.05
1o4v_A183 Phosphoribosylaminoimidazole mutase PURE; structur 96.0
4grd_A173 N5-CAIR mutase, phosphoribosylaminoimidazole carbo 95.96
1xmp_A170 PURE, phosphoribosylaminoimidazole carboxylase; pu 95.88
2h31_A425 Multifunctional protein ADE2; alpha-beta-alpha, li 94.97
4b4k_A181 N5-carboxyaminoimidazole ribonucleotide mutase; is 94.78
2bon_A332 Lipid kinase; DAG kinase, transferase; 1.90A {Esch 94.49
2ywx_A157 Phosphoribosylaminoimidazole carboxylase catalyti; 92.75
2i2c_A272 Probable inorganic polyphosphate/ATP-NAD kinase 1; 90.63
2q5c_A196 NTRC family transcriptional regulator; structural 89.95
2qv7_A337 Diacylglycerol kinase DGKB; alpha-beta domain 1, b 89.78
2pju_A225 Propionate catabolism operon regulatory protein; s 89.34
3s40_A304 Diacylglycerol kinase; structural genomics, the ce 88.48
1pfk_A320 Phosphofructokinase; transferase(phosphotransferas 88.11
1zxx_A319 6-phosphofructokinase; allosteric regulation, lact 87.42
3hno_A419 Pyrophosphate-dependent phosphofructokinase; struc 86.77
4a3s_A319 6-phosphofructokinase; transferase, glycolysis, de 86.14
2pln_A137 HP1043, response regulator; signaling protein; 1.8 85.88
>3okf_A 3-dehydroquinate synthase; structural genomics, center for structural genomics of infec diseases, csgid, NAD, lyase; HET: NAD; 2.50A {Vibrio cholerae o1 biovar eltor} Back     alignment and structure
Probab=100.00  E-value=3.8e-74  Score=559.80  Aligned_cols=347  Identities=49%  Similarity=0.761  Sum_probs=324.0

Q ss_pred             cccceeeecccchhh---hhccCCceEEEEEccCchHHHHHHHHHHHhhCCCCceEEEEEeCCCCCCCCHHHHHHHHHHH
Q 017815           14 GNSDTLLLISNNCLY---YRHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKA   90 (365)
Q Consensus        14 ~~~~~~~~~~~~~~l---~~~~~~~~~livtd~~~~~~~~~~v~~~L~~~g~~i~v~~~~~~~~e~~~~~~~v~~~~~~~   90 (365)
                      .+.+++||.+.-+.+   +.+ .++|++||||+++.+.+.+++.+.|+++|  +++.+++++++|++|++++++++++.+
T Consensus        40 ~~y~I~~G~g~l~~l~~l~~~-~~~rvlIVtd~~v~~~~~~~v~~~L~~~g--~~~~~~~~~~gE~~kt~~~v~~~~~~l  116 (390)
T 3okf_A           40 RSYPISIGAGLFANPALLSLS-AKQKVVIVTNHTVAPLYAPAIISLLDHIG--CQHALLELPDGEQYKTLETFNTVMSFL  116 (390)
T ss_dssp             GCEEEEEETTGGGCGGGGCCC-TTCEEEEEEETTTHHHHHHHHHHHHHHHT--CEEEEEEECSSGGGCBHHHHHHHHHHH
T ss_pred             CCCCEEEeCCHHHhHHHHHhc-CCCEEEEEECCcHHHHHHHHHHHHHHHcC--CeEEEEEECCCcCCchHHHHHHHHHHH
Confidence            467889999874433   333 36899999999999999999999999988  888778899999999999999999999


Q ss_pred             HHcCCCCcceEEEecCchHhhHHHHHHHHhhcCCcEEEeccccccccccccCCceEEecCCCcceeeccCCccEEEEehh
Q 017815           91 IESRLDRRCTFVALGGGVIGDMCGYAAASYLRGVSFIQIPTTVMAQVDSSVGGKTGINHRLGKNLIGAFYQPQCVLVDTD  170 (365)
Q Consensus        91 ~~~~~dr~~~IIaiGGGsv~D~ak~vA~~~~~g~p~i~IPTTl~A~~~s~~~~~~~i~~~~~k~~~~~~~~P~~viiD~~  170 (365)
                      +++++||+|+|||||||+++|+|||+|++|++|+|+|+||||++|++||++|++++++.+.+||.+|.|+.|++||+||+
T Consensus       117 ~~~~~~R~d~IIAvGGGsv~D~ak~~Aa~~~rgip~I~IPTTlla~vDssvggkt~I~~~~~Kn~ig~f~~P~~ViiD~~  196 (390)
T 3okf_A          117 LEHNYSRDVVVIALGGGVIGDLVGFAAACYQRGVDFIQIPTTLLSQVDSSVGGKTAVNHPLGKNMIGAFYQPKAVVIDTD  196 (390)
T ss_dssp             HHTTCCTTCEEEEEESHHHHHHHHHHHHHBTTCCEEEEEECSHHHHHHTSSSCEEEEEETTEEEEEEEECCCSEEEEEGG
T ss_pred             HhcCCCcCcEEEEECCcHHhhHHHHHHHHhcCCCCEEEeCCCCccccccCcCCeEEEEcCCCceEEeeccCCCEEEEcHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhCCCCHHHHHhcHHHHHHHHHccChhHHHHHHHhhhhhhcCCHHHHHHHHHHHHHhhHhhhhcchhhhccccccCcchh
Q 017815          171 TLNTLPDRELASGLAEVIKYGLIRDAEFFEWQEQNMHKLMARDPRAFAYAIKRSCENKAEVVSLDEKESGLRATLNLGHT  250 (365)
Q Consensus       171 l~~tlP~~~~~sG~~D~lkha~~~d~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~v~~d~~~~g~r~~l~~gH~  250 (365)
                      ++.|+|++++++|++|++||+++.||++|++++.+...+.+.+.+.+.+++.+||..|.++++.|+++.|+|+.||||||
T Consensus       197 ~l~tlP~r~~~aG~~D~lkha~i~D~~~~~~l~~~~~~l~~~~~~~l~~~i~~s~~~K~~vV~~D~~E~g~R~~Ln~GHT  276 (390)
T 3okf_A          197 CLTTLPAREFAAGMAEVIKYGIIYDSAFFDWLEAQMEALYALDEQALTYAIARCCQIKAEVVAQDEKESGIRALLNLGHT  276 (390)
T ss_dssp             GGGGSCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHC--CGGGGGGTTHH
T ss_pred             HHhhCCHHHHHHHHHHHHHHHHHcCHHHHHHHHhhHHHHhccCHHHHHHHHHHHHHHHHHHhcCCchhhcccchhccchH
Confidence            99999999999999999999999999999999988777777788889999999999999999999999999999999999


Q ss_pred             HHHHhhhccCCCCCCcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccccCC
Q 017815          251 FGHAIETGFGYGQWLHGEAVAAGMVMAVDMSYRLGWIDDSIVKRVHNILQQAKLPTAPPDTMTVEMFKSIMAVDKKVADG  330 (365)
Q Consensus       251 ~~Hale~~~~~~~~~HG~~vaig~~~~~~l~~~~g~~~~~~~~~i~~ll~~lglp~~~~~~i~~~~~~~~l~~dkk~~~~  330 (365)
                      |+||||...+|+.++|||+||+||.++++++.++|+++++..+++.++++++|+|+++++.++.+++++.|++|||++++
T Consensus       277 ~gHAiE~~~~~~~~~HGeaVaiGm~~~a~ls~~~g~~~~~~~~ri~~~l~~~glp~~~~~~~~~~~~~~~m~~DKK~~~g  356 (390)
T 3okf_A          277 FGHAIEAHMGYGNWLHGEAVSAGTVMAAKTAQLQGLIDASQFERILAILKKAHLPVRTPENMTFADFMQHMMRDKKVLAG  356 (390)
T ss_dssp             HHHHHHHHHCTTTSCHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTTCCCSCCTTCCHHHHHHHHTGGGTCCTT
T ss_pred             HHHHHHHhhCCCCCChHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhhhcccCC
Confidence            99999998777678999999999999999999999999999999999999999999988657899999999999999999


Q ss_pred             eEEEEeeCCCCcceEEccCCCHHHHHHHHHHHhc
Q 017815          331 LLRLILLKGPLGNCVFTGDYDRKALDDTLYAFCK  364 (365)
Q Consensus       331 ~~~~~l~~~~~g~~~~~~~~~~~~l~~~~~~~~~  364 (365)
                      +++|+||++ ||++.+..+++++++.+++++++.
T Consensus       357 ~i~~vL~~~-iG~~~~~~~v~~~~l~~~l~~~~~  389 (390)
T 3okf_A          357 ELRLVLPTS-IGTSAVVKGVPEAVIAQAIEYCRT  389 (390)
T ss_dssp             CCEEEEEEE-TTEEEEEECCCHHHHHHHHHHTTC
T ss_pred             EEEEEEECC-CCcEEEECCCCHHHHHHHHHHhcc
Confidence            999999998 999999889999999999988753
>3qbe_A 3-dehydroquinate synthase; shikimate pathway, mycobacte tuberculosis, nicotinamide adenine dinucleotide (NAD)-depen enzyme; 2.07A {Mycobacterium tuberculosis} PDB: 3qbd_A Back     alignment and structure
>2gru_A 2-deoxy-scyllo-inosose synthase; aminoglycoside, 2-deoxystreptamine, dehydroquinate synthase, lyase; HET: NAD EXO CAK; 2.15A {Bacillus circulans} PDB: 2d2x_A* Back     alignment and structure
>3clh_A 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, DHQS, amino-acid biosynthesis, cytoplasm, lyase, NAD; HET: NAD; 2.40A {Helicobacter pylori} Back     alignment and structure
>1sg6_A Pentafunctional AROM polypeptide; shikimate pathway, aromatic amino acid biosynthesis, DHQS, O form J, domain movement, cyclase, lyase; HET: NAD; 1.70A {Emericella nidulans} SCOP: e.22.1.1 PDB: 1nr5_A* 1nrx_A* 1nua_A 1nva_A* 1nvb_A* 1nvd_A* 1nve_A* 1nvf_A* 1dqs_A* Back     alignment and structure
>1xah_A Sadhqs, 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, open form, form B, domain movement, cyclase; HET: NAD; 2.20A {Staphylococcus aureus} PDB: 1xag_A* 1xai_A* 1xaj_A* 1xal_A* Back     alignment and structure
>1ujn_A Dehydroquinate synthase; riken structu genomics/proteomics initiative, RSGI, structural genomics,; 1.80A {Thermus thermophilus} SCOP: e.22.1.1 Back     alignment and structure
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae} Back     alignment and structure
>1rrm_A Lactaldehyde reductase; structural genomics, dehydrogenase, PSI, protein structure initiative; HET: APR; 1.60A {Escherichia coli} SCOP: e.22.1.2 PDB: 2bi4_A* 2bl4_A* Back     alignment and structure
>3ce9_A Glycerol dehydrogenase; NP_348253.1, 3-dehydroquinate syntha structural genomics, joint center for structural genomics; HET: MSE; 2.37A {Clostridium acetobutylicum atcc 824} Back     alignment and structure
>1jq5_A Glycerol dehydrogenase; oxidoreductase, NAD, glycerol metabolism; HET: NAD; 1.70A {Geobacillus stearothermophilus} SCOP: e.22.1.2 PDB: 1jpu_A* 1jqa_A* Back     alignment and structure
>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: NAP; 1.78A {Thermotoga maritima} SCOP: e.22.1.2 Back     alignment and structure
>3ox4_A Alcohol dehydrogenase 2; iron, NAD, oxidoreductase; HET: NAD; 2.00A {Zymomonas mobilis} PDB: 3owo_A* Back     alignment and structure
>1oj7_A Hypothetical oxidoreductase YQHD; structural genomics; HET: NZQ; 2.0A {Escherichia coli} SCOP: e.22.1.2 Back     alignment and structure
>1o2d_A Alcohol dehydrogenase, iron-containing; TM0920, structural genomics, JCSG, PSI, protein structure initiative; HET: MSE NAP TRS; 1.30A {Thermotoga maritima} SCOP: e.22.1.2 PDB: 1vhd_A* Back     alignment and structure
>3jzd_A Iron-containing alcohol dehydrogenase; YP_298327.1, putative alcohol dehedrogenase, structural GENO joint center for structural genomics; HET: MSE NAD PG4 P6G PGE; 2.10A {Ralstonia eutropha} Back     alignment and structure
>3hl0_A Maleylacetate reductase; structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE NAD EPE; 1.60A {Agrobacterium tumefaciens str} Back     alignment and structure
>3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti} Back     alignment and structure
>1kq3_A Glycerol dehydrogenase; structural genomics, joint center FO structural genomics, JCSG, protein structure initiative, PS oxidoreductase; 1.50A {Thermotoga maritima} SCOP: e.22.1.2 Back     alignment and structure
>1ta9_A Glycerol dehydrogenase; oxidoredu; 1.90A {Schizosaccharomyces pombe} Back     alignment and structure
>3iv7_A Alcohol dehydrogenase IV; NP_602249.1, iron-containing alcohol dehydrogenase, structur genomics, joint center for structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum} Back     alignment and structure
>3rf7_A Iron-containing alcohol dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: NAD EPE; 2.12A {Shewanella denitrificans} Back     alignment and structure
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii} Back     alignment and structure
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0 Back     alignment and structure
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A* Back     alignment and structure
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp} Back     alignment and structure
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A* Back     alignment and structure
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A* Back     alignment and structure
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A Back     alignment and structure
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1 Back     alignment and structure
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia} Back     alignment and structure
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1 Back     alignment and structure
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens} Back     alignment and structure
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis} Back     alignment and structure
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A Back     alignment and structure
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii} Back     alignment and structure
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A* Back     alignment and structure
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824} Back     alignment and structure
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A Back     alignment and structure
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1 Back     alignment and structure
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A Back     alignment and structure
>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A Back     alignment and structure
>1zxx_A 6-phosphofructokinase; allosteric regulation, lactobacillus BU transferase; 1.85A {Lactobacillus delbrueckii subsp} Back     alignment and structure
>3hno_A Pyrophosphate-dependent phosphofructokinase; structural genomics, PSI-2, protein structure initiative; 2.00A {Nitrosospira multiformis atcc 25196} PDB: 3k2q_A Back     alignment and structure
>4a3s_A 6-phosphofructokinase; transferase, glycolysis, degradosome; 2.30A {Bacillus subtilis} PDB: 6pfk_A 3u39_A 3pfk_A 4pfk_A* 1mto_A* Back     alignment and structure
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 365
d1sg6a_389 e.22.1.1 (A:) Dehydroquinate synthase, DHQS {Asper 3e-64
d1ujna_347 e.22.1.1 (A:) Dehydroquinate synthase, DHQS {Therm 4e-47
d1jq5a_366 e.22.1.2 (A:) Glycerol dehydrogenase {Bacillus ste 1e-22
d1kq3a_364 e.22.1.2 (A:) Glycerol dehydrogenase {Thermotoga m 1e-18
>d1sg6a_ e.22.1.1 (A:) Dehydroquinate synthase, DHQS {Aspergillus nidulans [TaxId: 162425]} Length = 389 Back     information, alignment and structure

class: Multi-domain proteins (alpha and beta)
fold: Dehydroquinate synthase-like
superfamily: Dehydroquinate synthase-like
family: Dehydroquinate synthase, DHQS
domain: Dehydroquinate synthase, DHQS
species: Aspergillus nidulans [TaxId: 162425]

 Score =  207 bits (527), Expect = 3e-64
 Identities = 119/351 (33%), Positives = 169/351 (48%), Gaps = 32/351 (9%)

Query: 31  HVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVEN----VILPDGENYKNMDTLMKV 86
                  ++VT+  +  +Y     +A  +    ++          P GE  K+  T   +
Sbjct: 30  DCSSTTYVLVTDTNIGSIYTPSFEEAFRKRAAEITPSPRLLIYNRPPGEVSKSRQTKADI 89

Query: 87  FDKAIESR--LDRRCTFVALGGGVIGDMCGYAAASYLRGVSFIQIPTTVMAQVDSSVGGK 144
            D  +       R    +ALGGGVIGD+ G+ A++Y+RGV ++Q+PTT++A VDSS+GGK
Sbjct: 90  EDWMLSQNPPCGRDTVVIALGGGVIGDLTGFVASTYMRGVRYVQVPTTLLAMVDSSIGGK 149

Query: 145 TGINHRLGKNLIGAFYQPQCVLVDTDTLNTLPDRELASGLAEVIKYGLIRDAEFFEWQEQ 204
           T I+  LGKNLIGA +QP  + +D + L TLP RE  +G+AEVIK   I   E F   E+
Sbjct: 150 TAIDTPLGKNLIGAIWQPTKIYIDLEFLETLPVREFINGMAEVIKTAAISSEEEFTALEE 209

Query: 205 NMHKLMA--------------RDPRAFAYAIKRSCENKAEVVSLDEKESGLRATLNLGHT 250
           N   ++                        I  S  +KA VVS DE+E GLR  LN GH+
Sbjct: 210 NAETILKAVRREVTPGEHRFEGTEEILKARILASARHKAYVVSADEREGGLRNLLNWGHS 269

Query: 251 FGHAIETGFGYGQWLHGEAVAAGMVMAVDMSYRLGWIDDSIVKRVHNILQQAKLPTAPPD 310
            GHAIE      Q LHGE VA GMV   +++  LG +    V R+   L    LPT+  D
Sbjct: 270 IGHAIEAILTP-QILHGECVAIGMVKEAELARHLGILKGVAVSRIVKCLAAYGLPTSLKD 328

Query: 311 T----------MTVEMFKSIMAVDKKVADGLLRLILLKGPLGNCVFTGDYD 351
                       +V+     MA+DKK      +++LL   +G    T    
Sbjct: 329 ARIRKLTAGKHCSVDQLMFNMALDKKNDGPKKKIVLLSA-IGTPYETRASV 378
>d1ujna_ e.22.1.1 (A:) Dehydroquinate synthase, DHQS {Thermus thermophilus [TaxId: 274]} Length = 347 Back     information, alignment and structure
>d1jq5a_ e.22.1.2 (A:) Glycerol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 366 Back     information, alignment and structure
>d1kq3a_ e.22.1.2 (A:) Glycerol dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 364 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query365
d1sg6a_389 Dehydroquinate synthase, DHQS {Aspergillus nidulan 100.0
d1ujna_347 Dehydroquinate synthase, DHQS {Thermus thermophilu 100.0
d1jq5a_366 Glycerol dehydrogenase {Bacillus stearothermophilu 100.0
d1o2da_359 Alcohol dehydrogenase TM0920 {Thermotoga maritima 100.0
d1vlja_398 NADH-dependent butanol dehydrogenase A (TM0820) {T 100.0
d1oj7a_390 Hypothetical oxidoreductase yqhD {Escherichia coli 100.0
d1rrma_385 Lactaldehyde reductase FucO {Escherichia coli [Tax 100.0
d1kq3a_364 Glycerol dehydrogenase {Thermotoga maritima [TaxId 100.0
d1o4va_169 N5-CAIR mutase (phosphoribosylaminoimidazole carbo 96.81
d1qcza_163 N5-CAIR mutase (phosphoribosylaminoimidazole carbo 96.31
d1u11a_159 N5-CAIR mutase (phosphoribosylaminoimidazole carbo 95.71
d1xmpa_155 N5-CAIR mutase (phosphoribosylaminoimidazole carbo 95.4
d2bona1295 Lipid kinase YegS {Escherichia coli [TaxId: 562]} 94.48
d2pjua1186 Propionate catabolism operon regulatory protein Pr 94.02
d2qv7a1312 Diacylglycerol kinase DgkB {Staphylococcus aureus 92.18
d1u0ta_302 Inorganic polyphosphate/ATP-NAD kinase PpnK {Mycob 91.26
d2a9pa1117 DNA-binding response regulator MicA, N-terminal do 87.34
d4pfka_319 ATP-dependent phosphofructokinase {Bacillus stearo 87.34
d1pfka_320 ATP-dependent phosphofructokinase {Escherichia col 81.04
d2f48a1 550 Pyrophosphate-dependent phosphofructokinase {Lyme 80.66
>d1sg6a_ e.22.1.1 (A:) Dehydroquinate synthase, DHQS {Aspergillus nidulans [TaxId: 162425]} Back     information, alignment and structure
class: Multi-domain proteins (alpha and beta)
fold: Dehydroquinate synthase-like
superfamily: Dehydroquinate synthase-like
family: Dehydroquinate synthase, DHQS
domain: Dehydroquinate synthase, DHQS
species: Aspergillus nidulans [TaxId: 162425]

Probab=100.00  E-value=5.6e-62  Score=474.86  Aligned_cols=338  Identities=36%  Similarity=0.519  Sum_probs=287.5

Q ss_pred             ceeeeccc------chhhhhccCCceEEEEEccCchHHHHHHHHHHHhhCCCCce------EEEEEeCCCCCCCCHHHHH
Q 017815           17 DTLLLISN------NCLYYRHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVS------VENVILPDGENYKNMDTLM   84 (365)
Q Consensus        17 ~~~~~~~~------~~~l~~~~~~~~~livtd~~~~~~~~~~v~~~L~~~g~~i~------v~~~~~~~~e~~~~~~~v~   84 (365)
                      .++.|.+.      .++++.+ ..++++||+|+++++.+++++.+.|+..+  ++      +..+.+++||.+|++++++
T Consensus        11 ~i~i~~~~~~~~~~~~~~~~~-~~~~~~ivtD~~v~~l~~~~v~~~l~~~~--~~~~~~~~~~~~~~~~gE~~Ks~~~~~   87 (389)
T d1sg6a_          11 SIIADFGLWRNYVAKDLISDC-SSTTYVLVTDTNIGSIYTPSFEEAFRKRA--AEITPSPRLLIYNRPPGEVSKSRQTKA   87 (389)
T ss_dssp             EEEEETTHHHHTHHHHHHHHS-CCSEEEEEEEHHHHHHHHHHHHHHHHHHH--HHSSSCCEEEEEEECSSGGGSSHHHHH
T ss_pred             cEEECCCcHHHHhHHHHHhcC-CCCcEEEEECCchHHHHHHHHHHHHHHhC--cccccCcceEEEEecCCcccCCHHHHH
Confidence            35555554      2333433 47899999999999999999999997654  33      3457889999999999999


Q ss_pred             HHHHHHHHcC--CCCcceEEEecCchHhhHHHHHHHHhhcCCcEEEeccccccccccccCCceEEecCCCcceeeccCCc
Q 017815           85 KVFDKAIESR--LDRRCTFVALGGGVIGDMCGYAAASYLRGVSFIQIPTTVMAQVDSSVGGKTGINHRLGKNLIGAFYQP  162 (365)
Q Consensus        85 ~~~~~~~~~~--~dr~~~IIaiGGGsv~D~ak~vA~~~~~g~p~i~IPTTl~A~~~s~~~~~~~i~~~~~k~~~~~~~~P  162 (365)
                      ++++++.+++  ++|+|+|||+|||+++|+|||+|++|+||+|++.||||++|++||+++++++++...+||.+|.|+.|
T Consensus        88 ~i~~~~~~~~~~~~r~d~IiaiGGG~v~D~ak~~A~~y~rgi~~i~vPTtlla~~Das~g~k~~in~~~~kn~~g~~~~P  167 (389)
T d1sg6a_          88 DIEDWMLSQNPPCGRDTVVIALGGGVIGDLTGFVASTYMRGVRYVQVPTTLLAMVDSSIGGKTAIDTPLGKNLIGAIWQP  167 (389)
T ss_dssp             HHHHHHHTSSSCCCTTCEEEEEESHHHHHHHHHHHHHGGGCCEEEEEECSHHHHHTTTSSCEEEEEETTEEEEEEEECCC
T ss_pred             HHHHHHHhcCCCcCCCceEEEeccchHHHHHHHHHHHHhcCCceeEeccchhccccccccceeeeccccccceeeecchh
Confidence            9999999988  88999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cEEEEehhhhCCCCHHHHHhcHHHHHHHHHccChhHHHHHHHhhhhhhc--------------CCHHHHHHHHHHHHHhh
Q 017815          163 QCVLVDTDTLNTLPDRELASGLAEVIKYGLIRDAEFFEWQEQNMHKLMA--------------RDPRAFAYAIKRSCENK  228 (365)
Q Consensus       163 ~~viiD~~l~~tlP~~~~~sG~~D~lkha~~~d~~~~~~~~~~~~~~~~--------------~~~~~l~~~i~~~~~~~  228 (365)
                      .+|++|++++.|+|+|++++|++|++||+++.||.++++++.+...+..              ...+.+.+.+.+++..+
T Consensus       168 ~~V~iD~~~l~tlP~r~~~aG~~e~ik~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~I~~s~~~k  247 (389)
T d1sg6a_         168 TKIYIDLEFLETLPVREFINGMAEVIKTAAISSEEEFTALEENAETILKAVRREVTPGEHRFEGTEEILKARILASARHK  247 (389)
T ss_dssp             SEEEEEGGGGGTSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCCCCTTSCTTGGGHHHHHHHHHHHHHHH
T ss_pred             hhhhhhhhhhcchHHHHHHhhhhhhhhhhhccCHHHHHHHHHhHHHHHHhhhhhccchhhhhcccHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999988765543321              11345778899999999


Q ss_pred             HhhhhcchhhhccccccCcchhHHHHhhhccCCCCCCcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCCCCC
Q 017815          229 AEVVSLDEKESGLRATLNLGHTFGHAIETGFGYGQWLHGEAVAAGMVMAVDMSYRLGWIDDSIVKRVHNILQQAKLPTAP  308 (365)
Q Consensus       229 ~~~v~~d~~~~g~r~~l~~gH~~~Hale~~~~~~~~~HG~~vaig~~~~~~l~~~~g~~~~~~~~~i~~ll~~lglp~~~  308 (365)
                      ..++..|+.+.|.|..+++||+|+|+||....+ +++|||+||+||.+++++++++|.++++.++++.++++++|+|+++
T Consensus       248 ~~iv~~d~~e~g~r~~ln~GHt~~HAlE~~~~~-~~lHGEaVaiGml~~~~ls~~~g~l~~~~~~~i~~~l~~lgLPt~l  326 (389)
T d1sg6a_         248 AYVVSADEREGGLRNLLNWGHSIGHAIEAILTP-QILHGECVAIGMVKEAELARHLGILKGVAVSRIVKCLAAYGLPTSL  326 (389)
T ss_dssp             HHHHHC-----CGGGGGGTTHHHHHHHHHHHTT-TSCHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHTTCCCST
T ss_pred             hhccccchhhccccchhhhhhhHHHHHHhhhhh-hhhHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCccc
Confidence            999999999999999999999999999998655 7999999999999999999999999999999999999999999999


Q ss_pred             CC----------CCCHHHHHHHHHhcccccCCeEEEEeeCCCCcceEE--ccCCCHHHHHHHH
Q 017815          309 PD----------TMTVEMFKSIMAVDKKVADGLLRLILLKGPLGNCVF--TGDYDRKALDDTL  359 (365)
Q Consensus       309 ~~----------~i~~~~~~~~l~~dkk~~~~~~~~~l~~~~~g~~~~--~~~~~~~~l~~~~  359 (365)
                      ++          .++.+++++.|.+|||+++++++|+||++ ||++..  ...++++.++.++
T Consensus       327 ~dl~~~~~~~~~~~~~~~l~~~~~~DKK~~~~~i~~vl~~~-iG~~~~~~~~~~~~~~i~~~L  388 (389)
T d1sg6a_         327 KDARIRKLTAGKHCSVDQLMFNMALDKKNDGPKKKIVLLSA-IGTPYETRASVVANEDIRVVL  388 (389)
T ss_dssp             TCHHHHHHTTTCCCCHHHHHHHHHTCCE-------ECCEEE-TTEESSSSCEECCHHHHHHHC
T ss_pred             hhhhcccccccccCCHHHHHHHHhhCCCcCCCEEEEEeEcc-CCcCeeecCCcCCHHHHHHHh
Confidence            74          25789999999999999999999999999 999754  3367788887654
>d1ujna_ e.22.1.1 (A:) Dehydroquinate synthase, DHQS {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1jq5a_ e.22.1.2 (A:) Glycerol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1o2da_ e.22.1.2 (A:) Alcohol dehydrogenase TM0920 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1vlja_ e.22.1.2 (A:) NADH-dependent butanol dehydrogenase A (TM0820) {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1oj7a_ e.22.1.2 (A:) Hypothetical oxidoreductase yqhD {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1rrma_ e.22.1.2 (A:) Lactaldehyde reductase FucO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1kq3a_ e.22.1.2 (A:) Glycerol dehydrogenase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1o4va_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1qcza_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1u11a_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) {Acetobacter aceti [TaxId: 435]} Back     information, alignment and structure
>d1xmpa_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) {Bacillus anthracis [TaxId: 1392]} Back     information, alignment and structure
>d2bona1 e.52.1.2 (A:5-299) Lipid kinase YegS {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2pjua1 c.92.3.1 (A:11-196) Propionate catabolism operon regulatory protein PrpR {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2qv7a1 e.52.1.2 (A:1-312) Diacylglycerol kinase DgkB {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1u0ta_ e.52.1.1 (A:) Inorganic polyphosphate/ATP-NAD kinase PpnK {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2a9pa1 c.23.1.1 (A:2-118) DNA-binding response regulator MicA, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d4pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2f48a1 c.89.1.1 (A:4-553) Pyrophosphate-dependent phosphofructokinase {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]} Back     information, alignment and structure