Citrus Sinensis ID: 017853

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-----
Protein Sequence
MALRKTLAERLFNITKTSRRALTNYRISSTAAAASRISQNPTRNNAPDPGDNGVFRRFLHKAAMFQPRISPVGGENLMEKLITIDIARDRIRLDGLSPPPTMKAAEKEKEKEKAEGLTVEEAKKVLRAVKMEMVKDRLRMIERNWIPYSEFVRVCEEACSDRELGLQFAKSLDDAGNVIVLGNVVFLKPEQVTKAIEGVIPLPSANPNQNHPRRKEYEEMEKQKAVIDKKADALVRRELWCGLGYFVVQTAAFMRLTFWELSWDVMEPVCFFVTSSSVIGSYLFFLKTAKEPTFGGFYKSRFSTKQKKLMKLHDFDGERYNQLRKIFYPHYSPPSTKVPFSDTYTDTHTSSDYDENLKISALDSH
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHcccccccccccccccHHHHcccccccccccccccccccHHHHHcccccccccccccccccHHHHHHHccccccccccccccccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccccccEEHHHHHHHHHHHHccHHHHHHHHHHHcccccEEEEccEEEEccHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHccccccccccccEcccccHHccccccccccccccccccccHHHHHHHccccccccccccccHHHHHHHHHcccccccEEccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHcccHHHHHHHHHHHHHccEEEEEccEEEEcHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHccc
Coil and Loop (DISEMBL)
MALRKTLAERLFNITKTSRRALTNYRISSTAAAasrisqnptrnnapdpgdngvFRRFLHKaamfqprispvggenLMEKLITIDIArdrirldglsppptmkAAEKEKEKEKAEGLTVEEAKKVLRAVKMEMVKDRLRMIernwipysEFVRVCEEACSDRELGLQFAKSLDDAGNVIVLGNVVFLKPEQVTKAIegviplpsanpnqnhprrkeYEEMEKQKAVIDKKADALVRRELWCGLGYFVVQTAAFMRLTFWELswdvmepvCFFVTSSSVIGSYLFFLKtakeptfggfyksrfSTKQKKLMKlhdfdgeryNQLRKifyphysppstkvpfsdtytdthtssdydenlkisaldsh
Flexible Loop (DISEMBL)
MALRKTLAERLFnitktsrraltnyRISSTaaaasrisqnptrnnapdpgDNGVFRRFLHKAAMfqprispvggenLMEKLITIDiardrirldglsppptmkaaekekekekaegltveeakKVLRAVKMEMVKDRLRmiernwipysEFVRVCEEACSDRELGLQFAKSLDDAGNVIVLGNVVFLKPEQVTKAIegviplpsanpnqnhprrKEYEEMEKQKAVIDKKADALVRRELWCGLGYFVVQTAAFMRLTFWELSWDVMEPVCFFVTSSSVIGSYLFFLKTAKEPTFGGFYKSRFSTKQKKLMKLHDFDGERYNQLRKIFYPhysppstkvpfSDTYTDThtssdydenlkisaldsh
Low Complexity Region (SEG)
MALRKTLAERLFNITKTSRRALTNYrisstaaaasrisQNPTRNNAPDPGDNGVFRRFLHKAAMFQPRISPVGGENLMEKLITIDIARDRIRLDGLSPPPTMkaaekekekekaeGLTVEEAKKVLRAVKMEMVKDRLRMIERNWIPYSEFVRVCEEACSDRELGLQFAKSLDDAGNVIVLGNVVFLKPEQVTKAIEGVIPLPSANPNQNHPRRKEYEEMEKQKAVIDKKADALVRRELWCGLGYFVVQTAAFMRLTFWELSWDVMEPVCFFVTSSSVIGSYLFFLKTAKEPTFGGFYKSRFSTKQKKLMKLHDFDGERYNQLRKIFYPHYSPPSTKVPFsdtytdthtssdydENLKISALDSH
Disordered region (IsUnstruct)
**********LFNIT**************************************VFRRFLHKAAMFQPRISPVGGENLMEKLITIDIARDRIRL******************************KVLRAVKMEMVKDRLRMIERNWIPYSEFVRVCEEACSDRELGLQFAKSLDDAGNVIVLGNVVFLKPEQVTKAIEGVI**************************IDKKADALVRRELWCGLGYFVVQTAAFMRLTFWELSWDVMEPVCFFVTSSSVIGSYLFFLKTAKEPTFGGFYKSRFSTKQKKLMKLHDFDGERYNQLRKIFYPHY**********************************
Disordered Region (DISOPRED)
***RKTLAERLFNITKTSR**********************************VFRRFLHK**********************IDIARDRIRLDG**********************************************ERNWIPYSEFV*******************LDDAGNVIVLGNVVFLKPEQV***********************************DKKADALVRRELWCGLGYFVVQTAAFMRLTFWELSWDVMEPVCFFVTSSSVIGSYLFFLKTAKEPTFGGFYKSRFSTKQKKLMKLHDFDGERYNQLRKIF*******************************IS*****
Disordered Region (DISEMBL)
MALRKTLAERLFNITKTSRRALTNYRISSTAAAASRISQNPTRNNAPDPGDNGVFRRFLHKAAMFQPRISPVGGENLMEKLITIDIARDRIRLDGLSPPPT***************LTVEEAKKVLRAVKMEMVKDRLRMIERNWIPYSEFVRVCEEACSDRELGLQFAKSLDDAGNVIVLGNVVFLKPEQVTKAIEGVIPLPSANPNQNHPRRKEYEEMEKQKAVIDKKADALVRRELWCGLGYFVVQTAAFMRLTFWELSWDVMEPVCFFVTSSSVIGSYLFFLKTAKEPTFGGFYKSRFSTKQKKLMKLHDFDGERYNQLRKIFYPHYSPPSTKVPFSDTYTDTHTSSDYDENLKISALDSH
Disordered Region (DISPRO)
MALRKTLAERLFNITKTSRRALTNY**************************NGVFRRFLHKAAMFQPRISPVGGENLMEKLITIDIARDRIRLDGLSPPPT**************GLTVEEAKKVLRAVKMEMVKDRLRMIERNWIPYSEFVRVCEEACSDRELGLQFAKSLDDAGNVIVLGNVVFLKPEQVTKAIEGVIPLPSANPNQNHPRRKEYEEMEKQKAVIDKKADALVRRELWCGLGYFVVQTAAFMRLTFWELSWDVMEPVCFFVTSSSVIGSYLFFLKTAKEPTFGGFYKSRFSTKQKKLMKLHDFDGERYNQLRKIFYPHYSPPSTKVPFSDTYTDTHTSSDYDENLKISALDS*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
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Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MALRKTLAERLFNITKTSRRALTNYRISSTAAAASRISQNPTRNNAPDPGDNGVFRRFLHKAAMFQPRISPVGGENLMEKLITIDIARDRIRLDGLSPPPTxxxxxxxxxxxxxxxxxxxxxKKVLRAVKMEMVKDRLRMIERNWIPYSEFVRVCEEACSDRELGLQFAKSLDDAGNVIVLGNVVFLKPEQVTKAIEGVIPLPSANPNQNHPRRKExxxxxxxxxxxxxxxxxxxxxELWCGLGYFVVQTAAFMRLTFWELSWDVMEPVCFFVTSSSVIGSYLFFLKTAKEPTFGGFYKSRFSTKQKKLMKLHDFDGERYNQLRKIFYPHYSPPSTKVPFSDTYTDTHTSSDYDENLKISALDSH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	365	2.2.26 [Sep-21-2011]
Q3UMR5	350	Calcium uniporter protein	yes	no	0.304	0.317	0.351	8e-14
Q8NE86	351	Calcium uniporter protein	yes	no	0.287	0.299	0.371	1e-13
Q08BI9	376	Calcium uniporter protein	yes	no	0.298	0.289	0.330	3e-12
Q810S1	345	Coiled-coil domain-contai	no	no	0.290	0.307	0.339	2e-07
Q9NWR8	336	Coiled-coil domain-contai	no	no	0.306	0.333	0.303	2e-07

>sp|Q3UMR5|MCU_MOUSE Calcium uniporter protein, mitochondrial OS=Mus musculus GN=Mcu PE=2 SV=2

 Score = 78.6 bits (192), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 59/111 (53%)

Query: 214 RKEYEEMEKQKAVIDKKADALVRRELWCGLGYFVVQTAAFMRLTFWELSWDVMEPVCFFV 273
           +++   +EK +  I +KA+      LW GL Y   Q     RLT+WE SWD+MEPV +F+
Sbjct: 210 KQQLAPLEKVRIEISRKAEKRTTLVLWGGLAYMATQFGILARLTWWEYSWDIMEPVTYFI 269

Query: 274 TSSSVIGSYLFFLKTAKEPTFGGFYKSRFSTKQKKLMKLHDFDGERYNQLR 324
           T  S +  Y +F+ T +E  +      ++     K  K   FD E+YNQL+
Sbjct: 270 TYGSAMAMYAYFVMTRQEYVYPEARDRQYLLFFHKGAKKSRFDLEKYNQLK 320

Mitochondrial inner membrane calcium transporter that mediates calcium uptake into mitochondrion.
Mus musculus (taxid: 10090)

>sp|Q8NE86|MCU_HUMAN Calcium uniporter protein, mitochondrial OS=Homo sapiens GN=MCU PE=1 SV=1

 Score = 77.8 bits (190), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 39/105 (37%), Positives = 56/105 (53%)

Query: 220 MEKQKAVIDKKADALVRRELWCGLGYFVVQTAAFMRLTFWELSWDVMEPVCFFVTSSSVI 279
           +EK +  I +KA+      LW GL Y   Q     RLT+WE SWD+MEPV +F+T  S +
Sbjct: 217 LEKVRIEISRKAEKRTTLVLWGGLAYMATQFGILARLTWWEYSWDIMEPVTYFITYGSAM 276

Query: 280 GSYLFFLKTAKEPTFGGFYKSRFSTKQKKLMKLHDFDGERYNQLR 324
             Y +F+ T +E  +      ++     K  K   FD E+YNQL+
Sbjct: 277 AMYAYFVMTRQEYVYPEARDRQYLLFFHKGAKKSRFDLEKYNQLK 321

Mitochondrial inner membrane calcium transporter that mediates calcium uptake into mitochondrion.

Homo sapiens (taxid: 9606)

>sp|Q08BI9|MCU_DANRE Calcium uniporter protein, mitochondrial OS=Danio rerio GN=mcu PE=2 SV=1

 Score = 73.2 bits (178), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 58/109 (53%)

Query: 216 EYEEMEKQKAVIDKKADALVRRELWCGLGYFVVQTAAFMRLTFWELSWDVMEPVCFFVTS 275
           + + +EK K  + KKA+      LW G+ Y   Q     RLT+WE SWD+MEPV +F+T 
Sbjct: 237 QLQPLEKVKEELSKKAERRTTWVLWGGMAYMATQFGILARLTWWEYSWDIMEPVTYFITY 296

Query: 276 SSVIGSYLFFLKTAKEPTFGGFYKSRFSTKQKKLMKLHDFDGERYNQLR 324
            + +  Y +F+ T +E  +      ++     +  K   FD E+YN+L+
Sbjct: 297 GTAMAMYAYFVLTRQEYLYPDARDRQYLLFFHRGAKRTRFDIEKYNKLK 345

Mitochondrial inner membrane calcium transporter that mediates calcium uptake into mitochondrion.

Danio rerio (taxid: 7955)

>sp|Q810S1|C109B_MOUSE Coiled-coil domain-containing protein 109B OS=Mus musculus GN=Ccdc109b PE=2 SV=1

 Score = 57.4 bits (137), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 59/106 (55%)

Query: 220 MEKQKAVIDKKADALVRRELWCGLGYFVVQTAAFMRLTFWELSWDVMEPVCFFVTSSSVI 279
           +E+ KA I+ +++A     LW GL    VQ  A   LT+W  SWD+MEPV FF++ ++ I
Sbjct: 211 LEQVKAAIEARSEANTSGLLWAGLALLSVQGGALAWLTWWVYSWDIMEPVTFFLSFANSI 270

Query: 280 GSYLFFLKTAKEPTFGGFYKSRFSTKQKKLMKLHDFDGERYNQLRK 325
             + +F+ T +  T+      +F     K  +   FD E+YN+L++
Sbjct: 271 VFFAYFIITRQNYTYSSLRSRQFLQFFHKKSQRRCFDVEQYNKLKE 316

Mus musculus (taxid: 10090)

>sp|Q9NWR8|C109B_HUMAN Coiled-coil domain-containing protein 109B OS=Homo sapiens GN=CCDC109B PE=2 SV=2

 Score = 57.0 bits (136), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 63/112 (56%)

Query: 214 RKEYEEMEKQKAVIDKKADALVRRELWCGLGYFVVQTAAFMRLTFWELSWDVMEPVCFFV 273
           +++ + +E+ KA I+  ++A     LW GL    +Q  A   LT+W  SWD+MEPV +F+
Sbjct: 196 KEQLQPLEQVKAGIEAHSEAKTSGLLWAGLALLSIQGGALAWLTWWVYSWDIMEPVTYFI 255

Query: 274 TSSSVIGSYLFFLKTAKEPTFGGFYKSRFSTKQKKLMKLHDFDGERYNQLRK 325
           T ++ +  + +F+ T ++ T+      +F     K  K   FD ++YN+L++
Sbjct: 256 TFANSMVFFAYFIVTRQDYTYSAVKSRQFLQFFHKKSKQQHFDVQQYNKLKE 307

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	365
255585128	346	conserved hypothetical protein [Ricinus	0.928	0.979	0.613	1e-112
449514752	361	PREDICTED: pentatricopeptide repeat-cont	0.964	0.975	0.562	1e-111
449461469	1058	PREDICTED: pentatricopeptide repeat-cont	0.904	0.311	0.576	1e-109
224096910	344	predicted protein [Populus trichocarpa]	0.873	0.927	0.570	1e-100
225430856	350	PREDICTED: uncharacterized protein LOC10	0.852	0.888	0.554	4e-98
15224063	336	uncharacterized protein [Arabidopsis tha	0.887	0.964	0.534	5e-98
24496456	336	hypothetical protein [Arabidopsis thalia	0.887	0.964	0.534	7e-98
297825289	335	hypothetical protein ARALYDRAFT_900864 [	0.879	0.958	0.536	7e-98
357518415	349	Coiled-coil domain-containing protein [M	0.939	0.982	0.504	3e-96
356496801	324	PREDICTED: uncharacterized protein LOC10	0.865	0.975	0.512	2e-95

>gi|255585128|ref|XP_002533269.1| conserved hypothetical protein [Ricinus communis] gi|223526894|gb|EEF29101.1| conserved hypothetical protein [Ricinus communis]

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 214/349 (61%), Positives = 266/349 (76%), Gaps = 10/349 (2%)

Query: 1   MALRKTLAERLFNITKTSRRALTNYRISSTAAAASRISQNPTRNN-APDPGDNGVFRRFL 59
           MA +KTLA+R+F I+K + ++LTN RIS+  A  SR  ++P++ N AP+PGDNG+FRR  
Sbjct: 1   MAFKKTLAQRIFRISKITNQSLTNCRISN-PAILSRFPKSPSKANIAPEPGDNGIFRRLF 59

Query: 60  HKAAMFQPRISP-----VGGENLMEKLITIDIARDRIRLDGLSPPPTMKAAEKEKEKEKA 114
           HK A FQP ISP       GENLMEKL + DIA+ RIRLDGL PP  +K ++  K +E+ 
Sbjct: 60  HKRAFFQPPISPELRAMPIGENLMEKLRSFDIAKGRIRLDGLIPP-EIKESDGPKPEERR 118

Query: 115 EGLTVEEAKKVLRAVKMEMVKDRLRMIERNWIPYSEFVRVCEEACSDRELGLQFAKSLDD 174
           E L+V  A+K+LRAV++EMVK RLR +E  WI Y +FVR+C E CSD E G + AK LD+
Sbjct: 119 EELSVAGARKLLRAVQLEMVKSRLREVESGWIAYPDFVRICGEGCSDPEQGSRVAKMLDE 178

Query: 175 AGNVIVLGNVVFLKPEQVTKAIEGVIPLPSANPNQNHPRRKEYEEMEKQKAVIDKKADAL 234
           +G VIVLG+VVFLKPEQV KAI G+IPLP+ NPN   PRRKE EEMEK+K VID+KAD L
Sbjct: 179 SGTVIVLGDVVFLKPEQVVKAIGGLIPLPATNPN--DPRRKELEEMEKKKVVIDRKADTL 236

Query: 235 VRRELWCGLGYFVVQTAAFMRLTFWELSWDVMEPVCFFVTSSSVIGSYLFFLKTAKEPTF 294
           VRRELWCGLGY VVQTAAFMRLTFWEL+WDVMEP+CF+VTS   +  Y FFL+T+KEP+F
Sbjct: 237 VRRELWCGLGYLVVQTAAFMRLTFWELTWDVMEPICFYVTSMYCMAGYAFFLRTSKEPSF 296

Query: 295 GGFYKSRFSTKQKKLMKLHDFDGERYNQLRKIFYPHYSPPSTKVPFSDT 343
            GFY+SRF+ KQ++LMKLH+FD +RY QL KI YP  +  S +VP   T
Sbjct: 297 EGFYQSRFNAKQQRLMKLHNFDAKRYQQLLKICYPQPASFSGQVPAIST 345

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449514752|ref|XP_004164470.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01390-like [Cucumis sativus]

 Score =  406 bits (1044), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 208/370 (56%), Positives = 262/370 (70%), Gaps = 18/370 (4%)

Query: 1   MALRKTLAERLFNITKTSRRALTNYRISSTAAAASRISQNPTRNNAPDPGDNGVFRRFLH 60
           MA +KTLA RLFN++K S +ALT  RISS++ A        T N A DPGD+ VFRRFLH
Sbjct: 1   MAFKKTLAHRLFNLSKISAQALTKCRISSSSLALRFPPHTNTSNIAHDPGDHSVFRRFLH 60

Query: 61  K-AAMFQPRISP-----VGGENLMEKLITIDIARDRIRLDGLSPPPTMKAAEKEKEKEKA 114
           K A + QP ISP       G N++EK  ++ IA DRIRLD L PP +   A      +  
Sbjct: 61  KRAVVTQPAISPELRELAAGGNIVEKFKSLGIASDRIRLDCLRPPASETLATDWDGSDVK 120

Query: 115 EGLTVEEAKKVLRAVKMEMVKDRLRMIERNWIPYSEFVRVCEEACSDRELGLQFAKSLDD 174
            GLTVE+A+K+LR  +MEMVK  LR I+++W+PYSEFVRVC + C D + GL+ A+ LD+
Sbjct: 121 NGLTVEDARKLLRVTRMEMVKRDLREIQKSWVPYSEFVRVCCQGCDDSDQGLEIAQMLDE 180

Query: 175 AGNVIVLGNVVFLKPEQVTKAIEGVIPLPSANPNQNHPRRKEYEEMEKQKAVIDKKADAL 234
           +G VIVLGNVV+L+PEQVTK IEG+IPLPS  PN     RKE+E ME QKA IDK+A+ L
Sbjct: 181 SGTVIVLGNVVYLRPEQVTKVIEGLIPLPSVIPND--AIRKEFEAMEIQKAAIDKRAETL 238

Query: 235 VRRELWCGLGYFVVQTAAFMRLTFWELSWDVMEPVCFFVTSSSVIGSYLFFLKTAKEPTF 294
            RRELWCGLG+ V QTAAFMRLTFWEL+WDVMEP+CF+VTS   I  Y FFLKT+KEP+F
Sbjct: 239 TRRELWCGLGFLVAQTAAFMRLTFWELTWDVMEPICFYVTSGYFIAGYTFFLKTSKEPSF 298

Query: 295 GGFYKSRFSTKQKKLMKLHDFDGERYNQLRKIFYPHYSPPSTKVPFSDTYTDTHTSSDYD 354
            GF++SRFSTKQK+LMKL +FD  RYN+LR+  +P+ S  + ++P SD+         YD
Sbjct: 299 EGFFQSRFSTKQKRLMKLQNFDIARYNKLRRACFPNSS--AQELPSSDSMV-------YD 349

Query: 355 ENLKISALDS 364
            + K+  LDS
Sbjct: 350 NSTKMQ-LDS 358

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449461469|ref|XP_004148464.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01390-like [Cucumis sativus]

 Score =  399 bits (1026), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 195/338 (57%), Positives = 247/338 (73%), Gaps = 8/338 (2%)

Query: 1    MALRKTLAERLFNITKTSRRALTNYRISSTAAAASRISQNPTRNNAPDPGDNGVFRRFLH 60
            + ++K ++ RLFN++K S +ALT  RISS++ A        T N A DPGD+ VFRRFLH
Sbjct: 697  IMMKKLISHRLFNLSKISAQALTKCRISSSSLALRFPPHTNTSNIAHDPGDHSVFRRFLH 756

Query: 61   K-AAMFQPRISP-----VGGENLMEKLITIDIARDRIRLDGLSPPPTMKAAEKEKEKEKA 114
            K A + QP ISP       G N++EK  ++ IA DRIRLD L PP +   A      +  
Sbjct: 757  KRAVVTQPAISPELRELAAGGNIVEKFKSLGIASDRIRLDCLRPPASETLATDWDRSDVK 816

Query: 115  EGLTVEEAKKVLRAVKMEMVKDRLRMIERNWIPYSEFVRVCEEACSDRELGLQFAKSLDD 174
             GLTVE+A+K+LR  +MEMVK  LR I+++W+PYSEFVRVC + C D + GL+ A+ LD+
Sbjct: 817  NGLTVEDARKLLRVTRMEMVKRDLREIQKSWVPYSEFVRVCCQGCDDSDQGLEIAQMLDE 876

Query: 175  AGNVIVLGNVVFLKPEQVTKAIEGVIPLPSANPNQNHPRRKEYEEMEKQKAVIDKKADAL 234
            +G VIVLGNVV+L+PEQVTKAIEG+IPLPS  PN     RKE+E ME QKA IDK+A+ L
Sbjct: 877  SGTVIVLGNVVYLRPEQVTKAIEGLIPLPSVIPND--AIRKEFEAMEIQKAAIDKRAETL 934

Query: 235  VRRELWCGLGYFVVQTAAFMRLTFWELSWDVMEPVCFFVTSSSVIGSYLFFLKTAKEPTF 294
             RRELWCGLG+ V QTAAFMRLTFWEL+WDVMEP+CF+VTS   I  Y FFLKT+KEP+F
Sbjct: 935  TRRELWCGLGFLVAQTAAFMRLTFWELTWDVMEPICFYVTSGYFIAGYTFFLKTSKEPSF 994

Query: 295  GGFYKSRFSTKQKKLMKLHDFDGERYNQLRKIFYPHYS 332
             GF++SRFSTKQK+LMKL +FD  RYN+LR+  +P+ S
Sbjct: 995  EGFFQSRFSTKQKRLMKLQNFDIARYNKLRRACFPNSS 1032

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224096910|ref|XP_002310782.1| predicted protein [Populus trichocarpa] gi|222853685|gb|EEE91232.1| predicted protein [Populus trichocarpa]

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/333 (57%), Positives = 252/333 (75%), Gaps = 14/333 (4%)

Query: 1   MALRKTLAERLFNITKTSRRALTNYRISSTAAAASRISQNPTRNNA-PD-PGDNGVFRRF 58
           M+L+K+LAER+   +K   + LTN RISS+    +RI QNP ++N  PD PG+ G+FRR 
Sbjct: 1   MSLKKSLAERVLKFSKIPNQYLTNSRISSSLQ--TRIHQNPAQSNTIPDHPGEPGIFRRL 58

Query: 59  LHKAAMFQPRIS--PVGGENLMEKLITIDIARDRIRLDGLSPPPTMKAAEKEKEKEKAEG 116
            HK A+F P +   P+G E L++++   DI +DRIR D LSPPP +      +E    EG
Sbjct: 59  FHKPAIFSPELRQLPIG-EGLIDRIRGFDIVKDRIRWDVLSPPPVVT-----EEVAAEEG 112

Query: 117 LTVEEAKKVLRAVKMEMVKDRLRMIERNWIPYSEFVRVCEEACSDRELGLQFAKSLDDAG 176
           LT E+A+K+L+  ++E +K RLR +E+ WI YSEFVRVC E CSD E G++ A++LD++G
Sbjct: 113 LTAEDARKLLKVAQLEGLKSRLREMEKTWICYSEFVRVCSEGCSDLEYGIRVARNLDESG 172

Query: 177 NVIVLGNVVFLKPEQVTKAIEGVIPLPSANPNQNHPRRKEYEEMEKQKAVIDKKADALVR 236
            V+VLGN+V LKPEQV KAI G+IPLP+ +PN   PRRKE +EMEKQKAVID+KA  LVR
Sbjct: 173 TVVVLGNLVLLKPEQVLKAIGGLIPLPATDPND--PRRKELQEMEKQKAVIDQKAGTLVR 230

Query: 237 RELWCGLGYFVVQTAAFMRLTFWELSWDVMEPVCFFVTSSSVIGSYLFFLKTAKEPTFGG 296
           RELWCGLG+ ++QTA FMRLTFWEL+WDVMEP+CF+VTS   +  Y FFL+T+KEP+F G
Sbjct: 231 RELWCGLGFLILQTAGFMRLTFWELTWDVMEPICFYVTSFYFVAGYTFFLRTSKEPSFEG 290

Query: 297 FYKSRFSTKQKKLMKLHDFDGERYNQLRKIFYP 329
           FY+SRFS KQK+LMKL++F+ ERY++LRKI +P
Sbjct: 291 FYQSRFSAKQKQLMKLNNFNMERYDELRKICHP 323

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225430856|ref|XP_002269123.1| PREDICTED: uncharacterized protein LOC100251398 [Vitis vinifera] gi|297735214|emb|CBI17576.3| unnamed protein product [Vitis vinifera]

 Score =  364 bits (934), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 184/332 (55%), Positives = 241/332 (72%), Gaps = 21/332 (6%)

Query: 1   MALRKTLAERLFNITKTSRRALTNYRISSTAAAASRISQNPTRNNAPDPGDNGVFRRFLH 60
           MA ++TL +RLFNI+K+S + L N RISS +++  R    PT+  AP+PG +G+ RR L 
Sbjct: 1   MAFKETLVKRLFNISKSSTQTLRNCRISSPSSSV-RTLIPPTK--APNPGHDGILRRLLQ 57

Query: 61  KAAMFQPRIS-------PVGGENLMEKLITIDIARDRIRLDGLSPPPTMKAAEKEKEKEK 113
           + A+FQ  +        PVG E L+EKL  +DIAR+R+RL+GL PP        E + E 
Sbjct: 58  RRAIFQAAMRAPEALSLPVG-EKLIEKLRGMDIARERLRLEGLRPP--------EMKSEA 108

Query: 114 AEGLTVEEAKKVLRAVKMEMVKDRLRMIERNWIPYSEFVRVCEEACSDRELGLQFAKSLD 173
            EGL+ E+A+K+LR  ++E VK  LR   ++WIPYSE+V +C E CSD   GL FAK LD
Sbjct: 109 VEGLSAEDARKLLRLAQLERVKSMLREARKSWIPYSEYVDICVEGCSDPGQGLSFAKMLD 168

Query: 174 DAGNVIVLGNVVFLKPEQVTKAIEGVIPLPSANPNQNHPRRKEYEEMEKQKAVIDKKADA 233
           ++G VIVLGN+V L+PEQV KAI+G+IP+P +   QN  R++E E ME+QK VIDK+A++
Sbjct: 169 ESGTVIVLGNIVLLRPEQVAKAIQGLIPMPVSF--QNDERKEELEGMERQKVVIDKEAES 226

Query: 234 LVRRELWCGLGYFVVQTAAFMRLTFWELSWDVMEPVCFFVTSSSVIGSYLFFLKTAKEPT 293
           LVRRELWCGLG+F+VQT  FMRLTFWELSWDVMEP+CFFVTS   +  Y FFLKT+KEP+
Sbjct: 227 LVRRELWCGLGFFMVQTLGFMRLTFWELSWDVMEPICFFVTSIYFMAGYSFFLKTSKEPS 286

Query: 294 FGGFYKSRFSTKQKKLMKLHDFDGERYNQLRK 325
           F GF++SRF  KQK+LMK  +FD  RYN+LRK
Sbjct: 287 FEGFFQSRFLAKQKRLMKSKNFDVGRYNELRK 318

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15224063|ref|NP_179959.1| uncharacterized protein [Arabidopsis thaliana] gi|3152605|gb|AAC17084.1| hypothetical protein [Arabidopsis thaliana] gi|330252397|gb|AEC07491.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  363 bits (933), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 184/344 (53%), Positives = 247/344 (71%), Gaps = 20/344 (5%)

Query: 1   MALRKTLAERLFNITKTSRRALTNYRISSTAAAA-SRISQNPTRNN--APDPGDNGVFRR 57
           MA+RK L+++LFNIT  + ++L N RISS++ A  +R+  + T     AP+PGD  + RR
Sbjct: 1   MAMRKLLSKKLFNITNVASQSLMNCRISSSSLAVRTRVPNDSTDTTKIAPEPGDLAMSRR 60

Query: 58  FLHKAAMFQP---RISPVGGENLMEKLITIDIARDRIRLDGLSPPPTMKAAEKEKEKEKA 114
           F+H +AM +P      PVG E+L+EKL  ID ++DRIRLDGLSPP            E+ 
Sbjct: 61  FMHNSAMIRPAEIMQMPVG-ESLIEKLREIDGSKDRIRLDGLSPP------------ERE 107

Query: 115 EGLTVEEAKKVLRAVKMEMVKDRLRMIERNWIPYSEFVRVCEEACSDRELGLQFAKSLDD 174
             LTV + KK+LRA ++E+VK +LR   R+W+PY EFV VC EA SD +LG + AK LDD
Sbjct: 108 TSLTVADTKKLLRAAQIEIVKSKLRETGRSWMPYKEFVSVCGEASSDPDLGSKIAKMLDD 167

Query: 175 AGNVIVLGNVVFLKPEQVTKAIEGVIPLPSANPNQNHPRRKEYEEMEKQKAVIDKKADAL 234
           + NVIVLG+ V ++P+QVTK+IEG++PLP  + N N PRR E++E+E +KAVID KA  L
Sbjct: 168 SANVIVLGDSVCIRPDQVTKSIEGLLPLPKIH-NPNDPRRIEFKELEAEKAVIDVKAHTL 226

Query: 235 VRRELWCGLGYFVVQTAAFMRLTFWELSWDVMEPVCFFVTSSSVIGSYLFFLKTAKEPTF 294
           VR+ELW GLGY ++QTA FMRLTFWELSWDVMEP+CF+VTS   +  Y FFL+T+KEP+F
Sbjct: 227 VRKELWAGLGYLILQTAGFMRLTFWELSWDVMEPICFYVTSVYFMAGYAFFLRTSKEPSF 286

Query: 295 GGFYKSRFSTKQKKLMKLHDFDGERYNQLRKIFYPHYSPPSTKV 338
            GFY+SRF  KQ+KLM  ++FD ERYN+L+K+F    S   +K+
Sbjct: 287 EGFYQSRFEAKQRKLMNEYEFDLERYNELKKLFCSKPSDHVSKI 330

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|24496456|gb|AAN59955.1| hypothetical protein [Arabidopsis thaliana]

 Score =  363 bits (932), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 184/344 (53%), Positives = 247/344 (71%), Gaps = 20/344 (5%)

Query: 1   MALRKTLAERLFNITKTSRRALTNYRISSTAAAA-SRISQNPTRNN--APDPGDNGVFRR 57
           MA+RK L+++LFNIT  + ++L N RISS++ A  +R+  + T     AP+PGD  + RR
Sbjct: 1   MAMRKLLSKKLFNITNVASQSLMNCRISSSSLAVRTRVPXDSTDTTKIAPEPGDLAMSRR 60

Query: 58  FLHKAAMFQP---RISPVGGENLMEKLITIDIARDRIRLDGLSPPPTMKAAEKEKEKEKA 114
           F+H +AM +P      PVG E+L+EKL  ID ++DRIRLDGLSPP            E+ 
Sbjct: 61  FMHNSAMIRPAEIMQMPVG-ESLIEKLREIDGSKDRIRLDGLSPP------------ERE 107

Query: 115 EGLTVEEAKKVLRAVKMEMVKDRLRMIERNWIPYSEFVRVCEEACSDRELGLQFAKSLDD 174
             LTV + KK+LRA ++E+VK +LR   R+W+PY EFV VC EA SD +LG + AK LDD
Sbjct: 108 TSLTVADTKKLLRAAQIEIVKSKLRETGRSWMPYKEFVSVCGEASSDPDLGSKIAKMLDD 167

Query: 175 AGNVIVLGNVVFLKPEQVTKAIEGVIPLPSANPNQNHPRRKEYEEMEKQKAVIDKKADAL 234
           + NVIVLG+ V ++P+QVTK+IEG++PLP  + N N PRR E++E+E +KAVID KA  L
Sbjct: 168 SANVIVLGDSVCIRPDQVTKSIEGLLPLPKIH-NPNDPRRIEFKELEAEKAVIDVKAHTL 226

Query: 235 VRRELWCGLGYFVVQTAAFMRLTFWELSWDVMEPVCFFVTSSSVIGSYLFFLKTAKEPTF 294
           VR+ELW GLGY ++QTA FMRLTFWELSWDVMEP+CF+VTS   +  Y FFL+T+KEP+F
Sbjct: 227 VRKELWAGLGYLILQTAGFMRLTFWELSWDVMEPICFYVTSVYFMAGYAFFLRTSKEPSF 286

Query: 295 GGFYKSRFSTKQKKLMKLHDFDGERYNQLRKIFYPHYSPPSTKV 338
            GFY+SRF  KQ+KLM  ++FD ERYN+L+K+F    S   +K+
Sbjct: 287 EGFYQSRFEAKQRKLMNEYEFDLERYNELKKLFCSKPSDHVSKI 330

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297825289|ref|XP_002880527.1| hypothetical protein ARALYDRAFT_900864 [Arabidopsis lyrata subsp. lyrata] gi|297326366|gb|EFH56786.1| hypothetical protein ARALYDRAFT_900864 [Arabidopsis lyrata subsp. lyrata]

 Score =  363 bits (932), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 184/343 (53%), Positives = 249/343 (72%), Gaps = 22/343 (6%)

Query: 1   MALRKTLAERLFNITKTSRRALTNYRISSTAAAA-SRISQNPTRNN--APDPGDNGVFRR 57
           MA+RK L+++LFNIT  + ++L N RISS++ A  +R+  + T     +P+PGD+ + RR
Sbjct: 1   MAMRKLLSKKLFNITNVASQSLMNCRISSSSLAVRTRVPTDSTDTTKISPEPGDSTISRR 60

Query: 58  FLHKAAMFQPRIS--PVGGENLMEKLITIDIARDRIRLDGLSPPPTMKAAEKEKEKEKAE 115
           F+H +AM +P I   PVG E+L+EKL  ID ++DRIRLDGL+PP            E+  
Sbjct: 61  FMHNSAMIRPEIMQMPVG-ESLIEKLREIDGSKDRIRLDGLTPP------------ERES 107

Query: 116 GLTVEEAKKVLRAVKMEMVKDRLRMIERNWIPYSEFVRVCEEACSDRELGLQFAKSLDDA 175
            LTV + KK+LRA ++E+VK +LR   R+W+ YSEFV VC EA SD +LG + AK LDD+
Sbjct: 108 SLTVADTKKLLRAAQIEIVKSKLRETGRSWMSYSEFVSVCGEASSDPDLGSRIAKMLDDS 167

Query: 176 GNVIVLGNVVFLKPEQVTKAIEGVIPLPSANPNQNHPRRKEYEEMEKQKAVIDKKADALV 235
            NVIVLG+ V ++P+QVTK+IEG++PLP  + N N PRR E +E+E +KAVID KA +LV
Sbjct: 168 ANVIVLGDSVCIRPDQVTKSIEGLLPLPKIH-NPNDPRRIELKELEAEKAVIDVKAHSLV 226

Query: 236 RRELWCGLGYFVVQTAAFMRLTFWELSWDVMEPVCFFVTSSSVIGSYLFFLKTAKEPTFG 295
           R+ELW GLGY ++QTA FMRLTFWELSWDVMEP+CF+VTS   +  Y FFL+T+KEP+F 
Sbjct: 227 RKELWAGLGYLILQTAGFMRLTFWELSWDVMEPICFYVTSVYFMAGYAFFLRTSKEPSFE 286

Query: 296 GFYKSRFSTKQKKLMKLHDFDGERYNQLRKIFYPHYSPPSTKV 338
           GFY+SRF  KQ+KLM  ++FD ERY++L+K+F    S PS  V
Sbjct: 287 GFYQSRFEAKQRKLMNDYEFDLERYDELKKLF---CSKPSAHV 326

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357518415|ref|XP_003629496.1| Coiled-coil domain-containing protein [Medicago truncatula] gi|355523518|gb|AET03972.1| Coiled-coil domain-containing protein [Medicago truncatula]

 Score =  358 bits (918), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 183/363 (50%), Positives = 247/363 (68%), Gaps = 20/363 (5%)

Query: 1   MALRKTLAERLFNITKTSRRALTNYRISSTAAAASRISQNPTRNNAPDPGD---NGVFRR 57
           MA +KTL +RL ++TK S ++L+N RISS++  +   S    R+ AP+PGD   +GV RR
Sbjct: 1   MAFKKTLTQRLLSLTKISSQSLSNCRISSSSLQSRHPSFVANRDIAPEPGDSSNDGVLRR 60

Query: 58  FLHKAAMFQPRI---SPVGGENLMEKLITIDIARDRIRLDGLSPPPTMKAAEKEKEKEKA 114
           FLHK A+F   +    P G + L++KL  +DIAR+RIRLDGL+PP     AE E   E+ 
Sbjct: 61  FLHKQAVFNSELRPPHPGGSDGLLQKLREMDIARNRIRLDGLTPP----EAEMEVATEEL 116

Query: 115 EGLTVEEAKKVLRAVKMEMVKDRLRMIERNWIPYSEFVRVCEEACSDRELGLQFAKSLDD 174
           +  T E+ +K+LRA ++E VK ++RMI+++ + YSEFV +C E CSD+E   + AK LDD
Sbjct: 117 KS-TAEDVRKLLRATQLEAVKSKIRMIQQSCVTYSEFVEMCGENCSDQEQAKKIAKILDD 175

Query: 175 AGNVIVLGNVVFLKPEQVTKAIEGVIPLPSANPNQNHPRRKEYEEMEKQKAVIDKKADAL 234
           +  VI+LG+VVFLKPEQV K I+ + P+P+  PN+     KE EEMEKQKA ID +A  +
Sbjct: 176 SATVIILGDVVFLKPEQVAKTIQALFPVPAPKPNEAE--TKELEEMEKQKATIDSRAHTM 233

Query: 235 VRRELWCGLGYFVVQTAAFMRLTFWELSWDVMEPVCFFVTSSSVIGSYLFFLKTAKEPTF 294
            RRELW GLG+ +VQ  A MRLTFWEL+WDVMEP+CF+ TS   +  Y FFL+T+KEP+F
Sbjct: 234 ARRELWGGLGFVLVQILASMRLTFWELNWDVMEPICFYATSMYFMAGYTFFLRTSKEPSF 293

Query: 295 GGFYKSRFSTKQKKLMKLHDFDGERYNQLRKIFYPHYSPPSTKVPFSDTYTDTHTSSDYD 354
            GFY+SRFSTKQK+LMKLH+FD  RYNQLR       SPP+     + T    H  + + 
Sbjct: 294 EGFYQSRFSTKQKQLMKLHNFDIARYNQLRDA-----SPPAPSSELNSTI--VHPLNQFH 346

Query: 355 ENL 357
            N+
Sbjct: 347 RNI 349

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356496801|ref|XP_003517254.1| PREDICTED: uncharacterized protein LOC100814253 [Glycine max]

 Score =  355 bits (911), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 178/347 (51%), Positives = 245/347 (70%), Gaps = 31/347 (8%)

Query: 1   MALRKTLAERLFNITKTSRRALTNYRISSTAAAASRISQNPTRNNAPDPGDNGVFRRFLH 60
           MA RKTLA+RL NITK S +ALTN RISS++    R+S  P  +   DPG+NG+FR    
Sbjct: 1   MAFRKTLAQRLLNITKVSSQALTNCRISSSSVIG-RLS--PRADEPVDPGENGLFR---- 53

Query: 61  KAAMFQPRISPVGGENLMEKLITIDIARDRIRLDGLSPPPTMKAAEKEKEKEKAEGLTVE 120
                    +P    NL+++L T+ IA +RIRLDGL+PPP M         E  + +TV+
Sbjct: 54  ---------APQLAGNLLDRLRTMGIAHNRIRLDGLTPPPPM---------EMVDTVTVK 95

Query: 121 EAKKVLRAVKMEMVKDRLRMIERNWIPYSEFVRVCEEACSDRELGLQFAKSLDDAGNVIV 180
           +A+K+L+  ++EMVK +LR   ++ I +SEF+ +C+E CSD++  ++ AK LD++  VIV
Sbjct: 96  DARKLLKVAQVEMVKAKLRETRKSCITFSEFIGICDEHCSDQDQAVEIAKMLDNSAAVIV 155

Query: 181 LGNVVFLKPEQVTKAIEGVIPLPSANPNQNHPRRKEYEEMEKQKAVIDKKADALVRRELW 240
           LG+VVFL+PEQV KAI+G++P+P A  +++   R+E+E MEK+K+ IDKKAD +VRRELW
Sbjct: 156 LGDVVFLRPEQVAKAIQGLLPVPGAKAHES--VRREFEVMEKKKSAIDKKADTMVRRELW 213

Query: 241 CGLGYFVVQTAAFMRLTFWELSWDVMEPVCFFVTSSSVIGSYLFFLKTAKEPTFGGFYKS 300
            GLG+ +VQT AFMRLTFWELSWDVMEP+CF++TS   +  Y FFL+T+KEP+F GFY+ 
Sbjct: 214 GGLGFMMVQTMAFMRLTFWELSWDVMEPICFYLTSMYCMAGYTFFLRTSKEPSFEGFYQV 273

Query: 301 RFSTKQKKLMKLHDFDGERYNQLRKIFYPHYSP----PSTKVPFSDT 343
           RFS+KQK LMKLH+FD E+YNQLR    P   P    PS  +PF ++
Sbjct: 274 RFSSKQKHLMKLHNFDIEKYNQLRAACSPTTMPPKFDPSIALPFDNS 320

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	365
TAIR|locus:2049013	336	AT2G23790 "AT2G23790" [Arabido	0.879	0.955	0.523	2e-86
TAIR|locus:2173629	321	AT5G66650 "AT5G66650" [Arabido	0.852	0.968	0.498	9.7e-80
TAIR|locus:2115205	338	AT4G36820 [Arabidopsis thalian	0.882	0.952	0.476	9e-77
TAIR|locus:2163842	293	AT5G42610 "AT5G42610" [Arabido	0.632	0.788	0.483	7.5e-57
TAIR|locus:2206510	293	AT1G57610 "AT1G57610" [Arabido	0.561	0.699	0.409	2.1e-38
TAIR|locus:505006112	292	AT1G09575 "AT1G09575" [Arabido	0.569	0.712	0.395	8.9e-38
DICTYBASE|DDB_G0286429	275	DDB_G0286429 [Dictyostelium di	0.380	0.505	0.342	9.2e-20
UNIPROTKB|F1MDL6	277	MCU "Uncharacterized protein"	0.304	0.400	0.351	1.5e-13
UNIPROTKB|F1SU78	289	MCU "Uncharacterized protein"	0.304	0.384	0.351	2.5e-13
RGD|1589771	350	Mcu "mitochondrial calcium uni	0.304	0.317	0.360	3.3e-13

TAIR|locus:2049013 AT2G23790 "AT2G23790" [Arabidopsis thaliana (taxid:3702)]

 Score = 864 (309.2 bits), Expect = 2.0e-86, P = 2.0e-86
 Identities = 180/344 (52%), Positives = 237/344 (68%)

Query:     1 MALRKTLAERLFNITKTSRRALTNYXXXXXXXXXXXXXQNPTRNN---APDPGDNGVFRR 57
             MA+RK L+++LFNIT  + ++L N               N + +    AP+PGD  + RR
Sbjct:     1 MAMRKLLSKKLFNITNVASQSLMNCRISSSSLAVRTRVPNDSTDTTKIAPEPGDLAMSRR 60

Query:    58 FLHKAAMFQP-RIS--PVGGENLMEKLITIDIARDRIRLDGLSPPPTMXXXXXXXXXXXX 114
             F+H +AM +P  I   PVG E+L+EKL  ID ++DRIRLDGLSPP               
Sbjct:    61 FMHNSAMIRPAEIMQMPVG-ESLIEKLREIDGSKDRIRLDGLSPPER------------E 107

Query:   115 XGLTVEEAKKVLRAVKMEMVKDRLRMIERNWIPYSEFVRVCEEACSDRELGLQFAKSLDD 174
               LTV + KK+LRA ++E+VK +LR   R+W+PY EFV VC EA SD +LG + AK LDD
Sbjct:   108 TSLTVADTKKLLRAAQIEIVKSKLRETGRSWMPYKEFVSVCGEASSDPDLGSKIAKMLDD 167

Query:   175 AGNVIVLGNVVFLKPEQVTKAIEGVIPLPSANPNQNHPRRKEYEEMEKQKAVIDKKADAL 234
             + NVIVLG+ V ++P+QVTK+IEG++PLP  + N N PRR E++E+E +KAVID KA  L
Sbjct:   168 SANVIVLGDSVCIRPDQVTKSIEGLLPLPKIH-NPNDPRRIEFKELEAEKAVIDVKAHTL 226

Query:   235 VRRELWCGLGYFVVQTAAFMRLTFWELSWDVMEPVCFFVTSSSVIGSYLFFLKTAKEPTF 294
             VR+ELW GLGY ++QTA FMRLTFWELSWDVMEP+CF+VTS   +  Y FFL+T+KEP+F
Sbjct:   227 VRKELWAGLGYLILQTAGFMRLTFWELSWDVMEPICFYVTSVYFMAGYAFFLRTSKEPSF 286

Query:   295 GGFYKSRFSTKQKKLMKLHDFDGERYNQLRKIFYPHYSPPSTKV 338
              GFY+SRF  KQ+KLM  ++FD ERYN+L+K+F    S PS  V
Sbjct:   287 EGFYQSRFEAKQRKLMNEYEFDLERYNELKKLFC---SKPSDHV 327

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2173629 AT5G66650 "AT5G66650" [Arabidopsis thaliana (taxid:3702)]

 Score = 801 (287.0 bits), Expect = 9.7e-80, P = 9.7e-80
 Identities = 166/333 (49%), Positives = 224/333 (67%)

Query:     1 MALRKTLAERLFNITKTSRRALTNYXXXXXXXXXXXXXQNPTRNNA--PDPGDNGVFRRF 58
             M+ +K+L + LFNI+KT  R                    PT++    PD GD+G+ RRF
Sbjct:     1 MSSKKSLVQSLFNISKTYSRI------------SGLTRMRPTKSGGIPPDAGDSGIRRRF 48

Query:    59 LHKAAMFQPRISPVGGENLMEKLITIDIARD-RIRLDGLSPPPTMXXXXXXXXXXXXXGL 117
             LHK A F P I P GG NLMEKL  + ++ + RIRLD + PPP+               +
Sbjct:    49 LHKRAFFSPEIVPKGG-NLMEKLRELTLSNNNRIRLDEMLPPPSPKKSSPEFFPA----V 103

Query:   118 TVEEAKKVLRAVKMEMVKDRLRMIERNWIPYSEFVRVCEEACSDRELGLQFAKSLDDAGN 177
             TVE+ KK++RA +ME+VK +LR I +NW+PYSEFVRVC E  SD E G + A  LD+AGN
Sbjct:   104 TVEDVKKLMRAAEMELVKSKLREIGKNWVPYSEFVRVCGEYSSDPEQGNRVANMLDEAGN 163

Query:   178 VIVLGNVVFLKPEQVTKAIEGVIPLPSANPNQNHPRRKEYEEMEKQKAVIDKKADALVRR 237
             VIVLG +V LKPE++T A+ G+IP  +  P+ +   R+E+E++E  K+ IDK+AD LVR+
Sbjct:   164 VIVLGKLVCLKPEELTSAMAGLIP--TLEPSLDAETRQEFEQLEIIKSDIDKRADDLVRK 221

Query:   238 ELWCGLGYFVVQTAAFMRLTFWELSWDVMEPVCFFVTSSSVIGSYLFFLKTAKEPTFGGF 297
             ELW GLG  + QT  F RLTFWELSWDVMEP+CF+VTS+  +  Y FFL+T+KEP+F GF
Sbjct:   222 ELWAGLGLIMAQTVGFFRLTFWELSWDVMEPICFYVTSTYFMAGYAFFLRTSKEPSFEGF 281

Query:   298 YKSRFSTKQKKLMKLHDFDGERYNQLRKIFYPH 330
             YKSRF TKQK+L+K+ DFD +R+ +L+K+  P+
Sbjct:   282 YKSRFETKQKRLIKMLDFDIDRFTKLQKMHRPN 314

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0010200 "response to chitin" evidence=RCA

TAIR|locus:2115205 AT4G36820 [Arabidopsis thaliana (taxid:3702)]

 Score = 773 (277.2 bits), Expect = 9.0e-77, P = 9.0e-77
 Identities = 163/342 (47%), Positives = 223/342 (65%)

Query:     3 LRKTLAERLFNITKTSRRALTNYXXXXXXXXXXXXXQNPTRNNA---PDPGDNGVFRRFL 59
             ++K L+ RLFN++KT+ ++L N                     A   P+PGD  + +RFL
Sbjct:     4 MKKLLSNRLFNMSKTASQSLMNCRTSSSSSLAMRTRVPKDIGEATIDPEPGDLTISQRFL 63

Query:    60 HKAAMFQ-PRISPVG-GENLMEKLITIDIARDRIRLDGLSPPPTMXXXXXXXXXXXXXGL 117
             +K +M      S +  GE+LMEKL  +D+ +DRIRLDGLS P                GL
Sbjct:    64 NKFSMNGIDTTSKMSIGESLMEKLKEMDMNKDRIRLDGLSHPKE-----------ETLGL 112

Query:   118 TVEEAKKVLRAVKMEMVKDRLRMIERNWIPYSEFVRVCEEACSDRELGLQFAKSLDDAGN 177
             TV++ KK+LRA ++E++K +L    + WI YS+F+ VC ++  D   G   AK LDD+GN
Sbjct:   113 TVQDVKKLLRAAEIEVIKTKLMETGKIWIRYSDFLGVCSDSSLDPSQGALIAKMLDDSGN 172

Query:   178 VIVLGNVVFLKPEQVTKAIEGVIPLPSANPNQNHPRRKEYEEMEKQKAVIDKKADALVRR 237
             VIV+GN V L+P Q+TK+IEG++PL   + N N PRRKE  E+E  K VID+KA +LVRR
Sbjct:   173 VIVMGNSVCLRPHQLTKSIEGLLPLSQIH-NPNDPRRKELNELEAIKTVIDQKAHSLVRR 231

Query:   238 ELWCGLGYFVVQTAAFMRLTFWELSWDVMEPVCFFVTSSSVIGSYLFFLKTAKEPTFGGF 297
             ELW GLGY ++QTA FMRLTFW+L+WDVMEP+CF+V+S   +  Y FFLKT++EP+F GF
Sbjct:   232 ELWAGLGYLIIQTAGFMRLTFWDLTWDVMEPICFYVSSVYFMAGYTFFLKTSREPSFQGF 291

Query:   298 YKSRFSTKQKKLMKLHDFDGERYNQLRKIFYPHYSPPSTKVP 339
             Y+SRF  KQ+KLM+  DFD  RY++L+K+F P    PS  VP
Sbjct:   292 YQSRFEAKQRKLMQSEDFDVGRYDELKKLFNPK---PSGAVP 330

GO:0005739 "mitochondrion" evidence=ISM

TAIR|locus:2163842 AT5G42610 "AT5G42610" [Arabidopsis thaliana (taxid:3702)]

 Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
 Identities = 119/246 (48%), Positives = 163/246 (66%)

Query:    91 IRLDGLSPPPTMXXXXXXXXXXXXXGLTVEEAKKVLRAVKMEMVKDRLRMIERNWIPYSE 150
             IR++ +SPP                GL+V E KK+LR  +ME VK+RLR I ++ + Y E
Sbjct:    56 IRIESVSPP--------RREETPVMGLSVSETKKLLRLYQMEKVKERLREIPKSSVSYWE 107

Query:   151 FVRVCEEACSDRELGLQFAKSLDDAGNVIVLGNVVFLKPEQVTKAIEGVIPLPSANPNQN 210
             F+++C E+C + E G Q AKSLD +G V+VLG++VFL P Q+ K++E +I   S  PN  
Sbjct:   108 FIQICCESCGNDEQGSQMAKSLDHSGCVVVLGDIVFLHPHQIAKSMEAMIKQTSVLPND- 166

Query:   211 HPRRKEYEEMEKQKAVIDKKADALVRRELWCGLGYFVVQTAAFMRLTFWELSWDVMEPVC 270
              PR++E  ++   K  ID +A  +V+ EL+CGLG+  VQT  FMRLTFWELSWDVMEP+C
Sbjct:   167 -PRKEELVQLATTKKSIDIEARRIVQAELYCGLGFLAVQTIGFMRLTFWELSWDVMEPIC 225

Query:   271 FFVTSSSVIGSYLFFLKTAKEPTFGGFYKSRFSTKQKKLMKLHDFDGERYNQLRKIF--Y 328
             FFVT+   I  Y+FFL+T+ EP+F G ++ RF TKQKKLM+ H FD  RYN+L  +F  +
Sbjct:   226 FFVTTIHFILGYIFFLRTSTEPSFEGLFRQRFKTKQKKLMERHGFDFLRYNELNSLFTTF 285

Query:   329 P---HY 331
             P   HY
Sbjct:   286 PCKFHY 291

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2206510 AT1G57610 "AT1G57610" [Arabidopsis thaliana (taxid:3702)]

 Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
 Identities = 86/210 (40%), Positives = 129/210 (61%)

Query:   117 LTVEEAKKVLRAVKMEMVKDRL-RMIERNWIPYSEFVRVCEEACSDREL--GLQFAKSLD 173
             +TV EAKK++R V +E +K +L  M ++  + Y+  +   +     R L     FA+ LD
Sbjct:    46 MTVLEAKKLMRLVNVEDMKKKLIGMGDKEMVTYTTLIEASQGLGIARSLDEAHAFARVLD 105

Query:   174 DAGNVIVLGNVVFLKPEQVTKAIEGVIPLPSANPNQNHPRRKEYEEMEKQKAVIDKKADA 233
             DAG +++  + V+L P +V   I   +PL   NP+ +   R+E+++M   K  ID  A  
Sbjct:   106 DAGVILIFRDKVYLHPHKVVDLIRKAVPL-GLNPD-DELIREEFDKMRSMKEEIDVLAHQ 163

Query:   234 LVRRELWCGLGYFVVQTAAFMRLTFWELSWDVMEPVCFFVTSSSVIGSYLFFLKTAKEPT 293
              VR+ LW GLGY VVQ   F+RLTFWE SWDVMEP+ FF T++ +I  Y +FL T+++PT
Sbjct:   164 QVRKILWGGLGYSVVQIGIFVRLTFWEFSWDVMEPITFFTTATGIIVGYAYFLMTSRDPT 223

Query:   294 FGGFYKSRFSTKQKKLMKLHDFDGERYNQL 323
             +  F K  F ++Q+KL+K H FD ER+ +L
Sbjct:   224 YQDFMKRLFLSRQRKLLKSHKFDAERFKEL 253

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:505006112 AT1G09575 "AT1G09575" [Arabidopsis thaliana (taxid:3702)]

 Score = 405 (147.6 bits), Expect = 8.9e-38, P = 8.9e-38
 Identities = 85/215 (39%), Positives = 133/215 (61%)

Query:   117 LTVEEAKKVLRAVKMEMVKDRL-RMIERNWIPYSEFVRVCEE---ACSDRELGLQFAKSL 172
             +T+ EAKK++R V +E +K +L  + +R+ + YS  +   +    A S  E  + FA+ L
Sbjct:    50 ITIAEAKKLMRLVNVEDMKKKLVGVADRDVVSYSTLLEASQGMGIARSPDEAHV-FARVL 108

Query:   173 DDAGNVIVLGNVVFLKPEQVTKAIEGVIPLPSANPNQNHPRRKEYEEMEKQKAVIDKKAD 232
             DDAG V++  + V+L P++V   I   +PL   NP ++  + +E+ ++   K  ID  A 
Sbjct:   109 DDAGVVLIFRDKVYLHPDKVVDLIRRAMPLDQ-NPEEDQIK-EEFNKLRIMKEEIDVLAH 166

Query:   233 ALVRRELWCGLGYFVVQTAAFMRLTFWELSWDVMEPVCFFVTSSSVIGSYLFFLKTAKEP 292
               VR+ LWCGL   +VQ   F RLTFWE SWDVMEP+ FF T++ +I  Y +FL T+++P
Sbjct:   167 RQVRKILWCGLATSMVQIGLFFRLTFWEFSWDVMEPITFFATATGIIVGYAYFLMTSRDP 226

Query:   293 TFGGFYKSRFSTKQKKLMKLHDFDGERYNQLRKIF 327
             T+  F K  F ++Q+KL+K H FD ER+ +L ++F
Sbjct:   227 TYQDFMKRLFLSRQRKLLKSHKFDCERFKELERLF 261

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

DICTYBASE|DDB_G0286429 DDB_G0286429 [Dictyostelium discoideum (taxid:44689)]

 Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
 Identities = 51/149 (34%), Positives = 80/149 (53%)

Query:   185 VFLKPEQVTKAIEGVIPLPSANPNQN----------HPRRKEYEEMEKQKAVIDKKADAL 234
             VF KP  + +++E ++ + +     N          +  R++ + +E++K VID+KA   
Sbjct:   103 VFTKPAHIYQSLEHILDIENKGVGLNKLIESKKSEINSLRQKIQPLEEKKQVIDRKAHRR 162

Query:   235 VRRELWCGLGYFVVQTAAFMRLTFWELSWDVMEPVCFFVTSSSVIGSYLFFLKTAKEPTF 294
                 +W GLGY   Q A   RLT+W+LSWD++EPV +F+T  SV+  Y +F  T  E T+
Sbjct:   163 ATAIIWTGLGYCFAQAAILARLTWWDLSWDIIEPVSYFLTFGSVLIGYTYFTMTKTEFTY 222

Query:   295 GGFYKSRFSTKQKKLMKLHDFDGERYNQL 323
                    FS +Q KL K ++F  E Y  L
Sbjct:   223 EALNHRLFSKRQDKLFKRNNFPKEDYENL 251

GO:0044351 "macropinocytosis" evidence=RCA

UNIPROTKB|F1MDL6 MCU "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 191 (72.3 bits), Expect = 1.5e-13, P = 1.5e-13
 Identities = 39/111 (35%), Positives = 59/111 (53%)

Query:   214 RKEYEEMEKQKAVIDKKADALVRRELWCGLGYFVVQTAAFMRLTFWELSWDVMEPVCFFV 273
             +++   +EK +  I +KA+      LW GL Y   Q     RLT+WE SWD+MEPV +F+
Sbjct:   137 KEQLAPLEKVRIEISRKAEKRTTLVLWGGLAYMATQFGILARLTWWEYSWDIMEPVTYFI 196

Query:   274 TSSSVIGSYLFFLKTAKEPTFGGFYKSRFSTKQKKLMKLHDFDGERYNQLR 324
             T  S +  Y +F+ T +E  +      ++     K  K   FD E+YNQL+
Sbjct:   197 TYGSAMAMYAYFVMTRQEYVYPEARDRQYLLFFHKGAKKSRFDLEKYNQLK 247

GO:0051561 "elevation of mitochondrial calcium ion concentration" evidence=IEA

GO:0035786 "protein complex oligomerization" evidence=IEA

GO:0019722 "calcium-mediated signaling" evidence=IEA

GO:0006851 "mitochondrial calcium ion transport" evidence=IEA

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0005262 "calcium channel activity" evidence=IEA

UNIPROTKB|F1SU78 MCU "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 191 (72.3 bits), Expect = 2.5e-13, P = 2.5e-13
 Identities = 39/111 (35%), Positives = 59/111 (53%)

Query:   214 RKEYEEMEKQKAVIDKKADALVRRELWCGLGYFVVQTAAFMRLTFWELSWDVMEPVCFFV 273
             +++   +EK +  I +KA+      LW GL Y   Q     RLT+WE SWD+MEPV +F+
Sbjct:   149 KEQLAPLEKVRIEISRKAEKRTTLVLWGGLAYMATQFGILARLTWWEYSWDIMEPVTYFI 208

Query:   274 TSSSVIGSYLFFLKTAKEPTFGGFYKSRFSTKQKKLMKLHDFDGERYNQLR 324
             T  S +  Y +F+ T +E  +      ++     K  K   FD E+YNQL+
Sbjct:   209 TYGSAMAMYAYFVMTRQEYVYPEARDRQYLLFFHKGAKKSRFDLEKYNQLK 259

GO:0051561 "elevation of mitochondrial calcium ion concentration" evidence=IEA

GO:0035786 "protein complex oligomerization" evidence=IEA

GO:0019722 "calcium-mediated signaling" evidence=IEA

GO:0006851 "mitochondrial calcium ion transport" evidence=IEA

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0005262 "calcium channel activity" evidence=IEA

RGD|1589771 Mcu "mitochondrial calcium uniporter" [Rattus norvegicus (taxid:10116)]

 Score = 194 (73.4 bits), Expect = 3.3e-13, P = 3.3e-13
 Identities = 40/111 (36%), Positives = 59/111 (53%)

Query:   214 RKEYEEMEKQKAVIDKKADALVRRELWCGLGYFVVQTAAFMRLTFWELSWDVMEPVCFFV 273
             R++   +EK +  I +KA+      LW GL Y   Q     RLT+WE SWD+MEPV +F+
Sbjct:   210 RQQLAPLEKVRIEISRKAEKRTTLVLWGGLAYMATQFGILARLTWWEYSWDIMEPVTYFI 269

Query:   274 TSSSVIGSYLFFLKTAKEPTFGGFYKSRFSTKQKKLMKLHDFDGERYNQLR 324
             T  S +  Y +F+ T +E  +      ++     K  K   FD E+YNQL+
Sbjct:   270 TYGSAMAMYAYFVMTRQEYVYPEARDRQYLLFFHKGAKKSRFDLEKYNQLK 320

GO:0005262 "calcium channel activity" evidence=ISO

GO:0005739 "mitochondrion" evidence=ISO;IDA

GO:0005743 "mitochondrial inner membrane" evidence=ISO;IDA;IMP

GO:0006851 "mitochondrial calcium ion transport" evidence=ISO;IDA;IMP

GO:0015292 "uniporter activity" evidence=ISO;IDA;IMP

GO:0019722 "calcium-mediated signaling" evidence=ISO

GO:0032024 "positive regulation of insulin secretion" evidence=ISO

GO:0035786 "protein complex oligomerization" evidence=ISO

GO:0042593 "glucose homeostasis" evidence=ISO

GO:0051560 "mitochondrial calcium ion homeostasis" evidence=IMP

GO:0051561 "elevation of mitochondrial calcium ion concentration" evidence=ISO;IDA;IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	365
pfam04678	180	pfam04678, DUF607, Protein of unknown function, DU	3e-67

>gnl|CDD|218209 pfam04678, DUF607, Protein of unknown function, DUF607

 Score =  209 bits (534), Expect = 3e-67
 Identities = 73/177 (41%), Positives = 100/177 (56%), Gaps = 10/177 (5%)

Query: 158 ACSDRELGLQFAKSLDDAGNVIVLGNVVFLKPEQVTKAIEGVIPLPSANPNQN------- 210
              D + G++FA +L+ AG VIVL + V+L+P  V  A+  ++PLP+ + +Q        
Sbjct: 4   FARDADRGIEFAAALEGAGVVIVLSDGVYLRPSFVVDAVHRLLPLPNVSEHQLDRTHYLR 63

Query: 211 ---HPRRKEYEEMEKQKAVIDKKADALVRRELWCGLGYFVVQTAAFMRLTFWELSWDVME 267
                  +E   +E+ K  ID+ A    RR LW GLG   VQ     RLTFWEL WDVME
Sbjct: 64  KRLEALSEELAPLEEIKKEIDRLAHRRARRLLWGGLGLLSVQWGVLARLTFWELGWDVME 123

Query: 268 PVCFFVTSSSVIGSYLFFLKTAKEPTFGGFYKSRFSTKQKKLMKLHDFDGERYNQLR 324
           PV +FVT S+ +G Y +FL T +EP++       FS +QKKL K   FD ERY +L 
Sbjct: 124 PVTYFVTLSTAMGGYAYFLYTNREPSYEAADDRLFSARQKKLYKRKGFDLERYEELV 180

This family represents a conserved region found in several uncharacterized eukaryotic proteins. Length = 180

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	365
KOG2966	325	consensus Uncharacterized conserved protein [Gener	100.0
PF04678	180	DUF607: Protein of unknown function, DUF607; Inter	100.0
cd05026	93	S-100Z S-100Z: S-100Z domain found in proteins sim	83.83
cd05031	94	S-100A10_like S-100A10_like: S-100A10 domain found	82.7
COG3462	117	Predicted membrane protein [Function unknown]	82.19
PF13499	66	EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A	80.25

>KOG2966 consensus Uncharacterized conserved protein [General function prediction only]

Probab=100.00  E-value=3.5e-81  Score=601.46  Aligned_cols=305  Identities=50%  Similarity=0.814  Sum_probs=284.4

Q ss_pred             CcchHHHHHHhhhhccccccccccccccchhhhccccCCCCCCCCCCCCCCchHHHHHhhhhhccCCCCCCCCCchhhhh
Q 017853            1 MALRKTLAERLFNITKTSRRALTNYRISSTAAAASRISQNPTRNNAPDPGDNGVFRRFLHKAAMFQPRISPVGGENLMEK   80 (365)
Q Consensus         1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~g~~rrfl~~~~~~~~~~~~p~g~~l~~~   80 (365)
                      ||++|.|.++|||++++.+               ++.|..-+  -+++|||.|+.|||+|.+++++|+..+ .|++|+++
T Consensus         1 ma~~~~l~~~l~~~~~~~~---------------~~~~~~~~--~~~~~~~~~~~rr~~~~~~~~~~~~v~-~~g~~~~~   62 (325)
T KOG2966|consen    1 MAMRKLLVKRLFNISRTAS---------------TRVPNDSG--QRTQPGDSTISRRFMTSSTVNSPSPVS-KGGLLMEK   62 (325)
T ss_pred             CcchhhhHHHHhhhhcccc---------------ccccchhc--ccccchhhhhhhhhhhccccCCCCccc-cccchhhh
Confidence            8999999999999999985               22322222  233999999999999999999999663 39999999


Q ss_pred             hhhcccccCcccccCCCCCcccchhhhhhhhhhccCCcHHHHHHHHHHHhHHHHHHHHhccCCccccHHHHHHHHHHhcC
Q 017853           81 LITIDIARDRIRLDGLSPPPTMKAAEKEKEKEKAEGLTVEEAKKVLRAVKMEMVKDRLRMIERNWIPYSEFVRVCEEACS  160 (365)
Q Consensus        81 lr~~~~~~~ri~ldgl~pp~~~~~~~~~~~~~~~~~~tv~e~rkllr~~~ve~lk~~L~~~~k~~Isy~EF~~lC~e~~~  160 (365)
                      +|.++.+++|||||+++||..          +...++||+|.++++|++++|..|.+|++.|+++++|++|+..|.+.++
T Consensus        63 lrl~~~~~~~frl~~ls~~~~----------~~~~~LtveD~kkl~ra~~~e~~k~kl~~tg~~~l~y~~F~~v~~~~~~  132 (325)
T KOG2966|consen   63 LRLPSGEKCRFRLDPLSPPVG----------EFLEDLTVEDRKKLLRAAYMEDGKKKLRETGKDWLLYSDFKLVCNDLSY  132 (325)
T ss_pred             ccccCCCCceeEeccCCCCch----------hhhhhccHHHHhHHHHHHHhhHHHHHHHhcchhheeHHHHHHHHccccc
Confidence            999999999999999999952          3344799999999999999999999999999999999999999999999


Q ss_pred             ChHHHHHHHHHhhhcCCeEEeCceeeeChHHHHHHHHhhCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017853          161 DRELGLQFAKSLDDAGNVIVLGNVVFLKPEQVTKAIEGVIPLPSANPNQNHPRRKEYEEMEKQKAVIDKKADALVRRELW  240 (365)
Q Consensus       161 ~~~eA~~~a~~Ld~SG~Vivlgd~V~LrP~~V~~~v~~~lpl~~~~~~~~d~~r~EL~~Le~~K~eID~~A~~~~rr~lw  240 (365)
                      ++++..+.|..+|++|+|+++|+.||++|+++++.+++++|...-.. ++|++++||+||+..|++||.+|++++++++|
T Consensus       133 d~~~~k~~a~~~d~~g~v~vl~~~V~l~p~~l~~~~~~l~~~~~l~~-~~e~~keel~~Le~~K~~Id~~a~~~v~~~LW  211 (325)
T KOG2966|consen  133 DVSQPKRIAKSLDHSGNVIVLGDLVCLLPTQLTKSIEGLIPEKKLLL-PNEPRKEELAPLEAVKAEIDQKAEALVRKELW  211 (325)
T ss_pred             CCCccccccccccccceeehhhhHHHhhHHHHHHHHHhhccccccCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999974443 38999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhheeEEEEecccccchhHHHHHhHHHHHHHhhhhhcCCCCChhhHHHHHhhHHHHHHHHhcCCCHHHH
Q 017853          241 CGLGYFVVQTAAFMRLTFWELSWDVMEPVCFFVTSSSVIGSYLFFLKTAKEPTFGGFYKSRFSTKQKKLMKLHDFDGERY  320 (365)
Q Consensus       241 ~GL~~L~~Q~g~l~rLTfweySWDVMEPITYFvt~~t~i~gYaYFl~T~re~Sye~~~~~~~~~rq~kL~kk~gFD~~rY  320 (365)
                      +|||+|++|+|+|+||||||||||||||||||+|++++|+||+||++|++||||+++++++|..+|+|++++++||++||
T Consensus       212 aGLg~l~vQtg~f~RLTfWE~SWDVMEPItffvT~~~~magyayFL~Tsqepsy~~~~~r~f~~kq~Kl~k~~~FDierY  291 (325)
T KOG2966|consen  212 AGLGYLAVQTGGFARLTFWEYSWDVMEPITFFVTSTYFMAGYAYFLRTSQEPSYEGFYKRRFLTKQRKLMKKQDFDIERY  291 (325)
T ss_pred             hhHHHHHHHHhHhhhhhhhhhhhhhccceeeeeehHHHHHHHHhheeeccCcccHHHHHHHHHHHHHHHHHhccCCHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCC
Q 017853          321 NQLRKIFYPHYSPP  334 (365)
Q Consensus       321 ~eL~~e~~~l~~~~  334 (365)
                      |+|++.+++.+++.
T Consensus       292 neLk~~~~~~~~~~  305 (325)
T KOG2966|consen  292 NELKKLFAPAPCSL  305 (325)
T ss_pred             HHHHHHHhhCcccc
Confidence            99999999999876

>PF04678 DUF607: Protein of unknown function, DUF607; InterPro: IPR006769 This entry represents the C-terminal domain of coiled-coil domain containing protein 109

Probab=100.00  E-value=5.3e-53  Score=382.21  Aligned_cols=166  Identities=43%  Similarity=0.750  Sum_probs=156.5

Q ss_pred             cCChHHHHHHHHHhhhcCCeEEeCceeeeChHHHHHHHHhhCCCCCCCC----------CCCchHHHHHHHHHHHHHHHH
Q 017853          159 CSDRELGLQFAKSLDDAGNVIVLGNVVFLKPEQVTKAIEGVIPLPSANP----------NQNHPRRKEYEEMEKQKAVID  228 (365)
Q Consensus       159 ~~~~~eA~~~a~~Ld~SG~Vivlgd~V~LrP~~V~~~v~~~lpl~~~~~----------~~~d~~r~EL~~Le~~K~eID  228 (365)
                      ..++++|.++|++|+++|+||.+++.|||+|++|.++|+.+++......          .+++++++||++|+++|.+||
T Consensus         5 ~~~~~~~~~~~~~l~~~g~vi~~~~~v~L~P~~v~~~v~~~~~~~~~~~~~~~~~~~l~~~l~~~~~el~~le~~k~~id   84 (180)
T PF04678_consen    5 IRDEDEGIEFAAALDESGVVIALSDSVYLRPKQVKEAVHRLLPLLNVEEYQNSRERQLRKRLEELRQELAPLEKIKQEID   84 (180)
T ss_pred             ccchhhHHHHHHHhCCCCCEEEECCeeeECHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3468999999999999999999999999999999999999999864222          134688999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhheeEEEEecccccchhHHHHHhHHHHHHHhhhhhcCCCCChhhHHHHHhhHHHHH
Q 017853          229 KKADALVRRELWCGLGYFVVQTAAFMRLTFWELSWDVMEPVCFFVTSSSVIGSYLFFLKTAKEPTFGGFYKSRFSTKQKK  308 (365)
Q Consensus       229 ~~A~~~~rr~lw~GL~~L~~Q~g~l~rLTfweySWDVMEPITYFvt~~t~i~gYaYFl~T~re~Sye~~~~~~~~~rq~k  308 (365)
                      ++|++++++++|+|||+|++|+|+|+|||||+||||||||||||+|++++|+||+||++|++|++|++++++.+.++++|
T Consensus        85 ~~A~~~~~~~~w~gl~~l~~q~~~l~rLTf~e~sWDvMEPVTYfv~~~~~i~~y~yfl~t~re~sy~~~~~~~~~~~~~k  164 (180)
T PF04678_consen   85 EKAEKRARRLLWGGLALLVVQFGILARLTFWEYSWDVMEPVTYFVGYGTSILGYAYFLYTRREYSYESVFQRRFLRRQHK  164 (180)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhhHHHHHhHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCHHHHHHHH
Q 017853          309 LMKLHDFDGERYNQLR  324 (365)
Q Consensus       309 L~kk~gFD~~rY~eL~  324 (365)
                      +|+++|||+++||+|+
T Consensus       165 l~~~~~fD~~~y~~L~  180 (180)
T PF04678_consen  165 LYAKHGFDIERYNELK  180 (180)
T ss_pred             HHHHcCCCHHHHHhcC
Confidence            9999999999999985

>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z

Probab=83.83  E-value=2.6  Score=34.37  Aligned_cols=42  Identities=21%  Similarity=0.318  Sum_probs=36.2

Q ss_pred             CcHHHHHHHHHHH------------hHHHHHHHHhccCCccccHHHHHHHHHHh
Q 017853          117 LTVEEAKKVLRAV------------KMEMVKDRLRMIERNWIPYSEFVRVCEEA  158 (365)
Q Consensus       117 ~tv~e~rkllr~~------------~ve~lk~~L~~~~k~~Isy~EF~~lC~e~  158 (365)
                      ||.+|++.+++.-            .++.+-..++.++...|+|.||+.++..-
T Consensus        29 Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l   82 (93)
T cd05026          29 LSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAAL   82 (93)
T ss_pred             ECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence            9999999999652            37788888888999999999999999763

S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac

>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10

Probab=82.70  E-value=2.9  Score=33.78  Aligned_cols=44  Identities=18%  Similarity=0.308  Sum_probs=32.0

Q ss_pred             CcHHHHHHHHHH------------HhHHHHHHHHhccCCccccHHHHHHHHHHhcC
Q 017853          117 LTVEEAKKVLRA------------VKMEMVKDRLRMIERNWIPYSEFVRVCEEACS  160 (365)
Q Consensus       117 ~tv~e~rkllr~------------~~ve~lk~~L~~~~k~~Isy~EF~~lC~e~~~  160 (365)
                      ||..|++.+|+.            ..++.+=..++.++...|+|+||+.+|...++
T Consensus        27 Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~~~~   82 (94)
T cd05031          27 LSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAGLSI   82 (94)
T ss_pred             ECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHH
Confidence            777777777764            12444555667788899999999999987653

S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.

>COG3462 Predicted membrane protein [Function unknown]

Probab=82.19  E-value=9.8  Score=33.30  Aligned_cols=97  Identities=14%  Similarity=0.209  Sum_probs=61.1

Q ss_pred             HHHHHHHHHHHHHHHH--HHHH----hhheeEEEEecc----------cccchhHHHHHhHHHHHHHhhhhhcCCCCC-h
Q 017853          232 DALVRRELWCGLGYFV--VQTA----AFMRLTFWELSW----------DVMEPVCFFVTSSSVIGSYLFFLKTAKEPT-F  294 (365)
Q Consensus       232 ~~~~rr~lw~GL~~L~--~Q~g----~l~rLTfweySW----------DVMEPITYFvt~~t~i~gYaYFl~T~re~S-y  294 (365)
                      +|++.+++|...|+..  +-.+    +++-.+||-.+|          =+.=||-.++.....++...|.+-.-+..+ +
T Consensus         2 dk~ven~~w~ligliavi~~v~li~~~~~gg~~y~~gy~gm~GG~yGm~lImpI~~~vvli~lvvfm~~~~g~~r~~~~~   81 (117)
T COG3462           2 DKKVENFAWLLIGLIAVIAVVGLIPSGFHGGAFYPGGYRGMMGGLYGMWLIMPIFWAVVLIFLVVFMFYILGAVRRGSDD   81 (117)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhhcccccCcccCCCccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcccchh
Confidence            3567788887554442  2221    233456665444          455688888887766665555554333333 4


Q ss_pred             hhHHH-HHhhHHHHHHHHhcCCCHHHHHHHHHhhc
Q 017853          295 GGFYK-SRFSTKQKKLMKLHDFDGERYNQLRKIFY  328 (365)
Q Consensus       295 e~~~~-~~~~~rq~kL~kk~gFD~~rY~eL~~e~~  328 (365)
                      .++-+ .+...-.+.-|++-..+-+.|+...++++
T Consensus        82 d~~e~~sRA~eIlkER~AkGEItEEEY~r~~~~ir  116 (117)
T COG3462          82 DDAERGSRAEEILKERYAKGEITEEEYRRIIRTIR  116 (117)
T ss_pred             cccccccHHHHHHHHHHhcCCCCHHHHHHHHHHhc
Confidence            45444 55556666778999999999999988775

>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E

Probab=80.25  E-value=3.3  Score=30.54  Aligned_cols=39  Identities=15%  Similarity=0.358  Sum_probs=24.9

Q ss_pred             CcHHHHHHHHHHHh-----------HHHHHHHHhccCCccccHHHHHHHH
Q 017853          117 LTVEEAKKVLRAVK-----------MEMVKDRLRMIERNWIPYSEFVRVC  155 (365)
Q Consensus       117 ~tv~e~rkllr~~~-----------ve~lk~~L~~~~k~~Isy~EF~~lC  155 (365)
                      ||.+|++++++..+           ++.+=...+.++...|+++||+.+|
T Consensus        17 i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~   66 (66)
T PF13499_consen   17 ISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM   66 (66)
T ss_dssp             EEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred             CCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence            66667777666654           1222445566777788888887765

...

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	365
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-11
3dpt_A	332	ROCO, RAB family protein; alpha-beta-protein, sign	6e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 63.7 bits (154), Expect = 4e-11
 Identities = 59/335 (17%), Positives = 93/335 (27%), Gaps = 94/335 (28%)

Query: 25  YRISSTAAAASRISQNPTRNNA----PDPGDNGVFRRFLHKAAMFQPRISPVGGENLMEK 80
            RI S  A   R+ ++    N      +  +   +  F         +I           
Sbjct: 225 LRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFN-----LSCKI----------- 268

Query: 81  LITIDIARDRIRLDGLSPPPTMKAAEKEKEKEKAEGLTVEEAKKVLRAVKMEMVKDRLRM 140
           L+T    R +   D LS   T   +           LT +E K +L    ++     L  
Sbjct: 269 LLT---TRFKQVTDFLSAATTTHISLDHHSM----TLTPDEVKSLL-LKYLDCRPQDLP- 319

Query: 141 IERNWIPYSEFVRVCEEACSDRELGL-QFAKSLDDAGNVIVLGNVVFLKPEQVTKAIEGV 199
                           E  +     L   A+S+ D   +    N   +  +++T  IE  
Sbjct: 320 ---------------REVLTTNPRRLSIIAESIRD--GLATWDNWKHVNCDKLTTIIE-- 360

Query: 200 IPLPSANPNQNHPRRKEYEEMEKQKAVIDKKAD----ALVRRELWCGLGYFVVQTAAFMR 255
             L    P +    RK ++ +    +V    A      L    +W  +            
Sbjct: 361 SSLNVLEPAEY---RKMFDRL----SVFPPSAHIPTILLSL--IWFDVIKS--------- 402

Query: 256 LTFWELSWDVMEPVCFFVTSSSVIGSYLFFLKTAKEPTFG--GFYKSRFSTKQKKLMKLH 313
                   DVM  V      S V        K  KE T      Y      K +    LH
Sbjct: 403 --------DVMVVVNKLHKYSLV-------EKQPKESTISIPSIY-LELKVKLENEYALH 446

Query: 314 DFDGERYNQLRKIFYPHYSPPSTKVPFSDTYTDTH 348
               + YN  +        P     P+ D Y  +H
Sbjct: 447 RSIVDHYNIPKTFDSDDLIP-----PYLDQYFYSH 476

>3dpt_A ROCO, RAB family protein; alpha-beta-protein, signaling protein; 2.90A {Chlorobaculum tepidum} Length = 332

 Score = 40.2 bits (93), Expect = 6e-04
 Identities = 23/194 (11%), Positives = 59/194 (30%), Gaps = 22/194 (11%)

Query: 134 VKDRLRMI--ERNWIPYSEFVRVCEEAC-SDRELGLQFAKSLDDAGNVI-----VLGNVV 185
           VK++L      + ++  +E  ++C ++  +D          L++ G V+      L  + 
Sbjct: 21  VKEKLVEATTAQRYLNRTEVEKICNDSGITDPGERKTLLGYLNNLGIVLYFEALDLSEIY 80

Query: 186 FLKPEQVTKAIEGVIPLPSANPNQNHPRRKEYEEMEKQKAVIDKKADALVRRELWCGLGY 245
            L P  VT  +  +I          H        +  ++    +               Y
Sbjct: 81  VLDPHWVTIGVYRIINSS--KTKNGHLNTSALGYILNEE----QIRCDEYDPAKNNKFTY 134

Query: 246 FVVQTAAFMRLT-FWELSWDVMEPVCFFVTSSSVIGSYLFFLKTAKEPTFGGFYK----- 299
            +++    + +   +EL +D  + +    ++          +   +   F   Y      
Sbjct: 135 TLLEQRYLLDIMKQFELCYDEGKGLFIIPSNLPTQIDNEPEITEGEPLRFIMKYDYLPST 194

Query: 300 --SRFSTKQKKLMK 311
              R     +  + 
Sbjct: 195 IIPRLMIAMQHQIL 208

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	365
3dpt_A	332	ROCO, RAB family protein; alpha-beta-protein, sign	97.35
3dpu_A	535	RAB family protein; roccor, G-domain, COR, GTP-bin	93.85
2pmy_A	91	RAS and EF-hand domain-containing protein; rasef,	92.79
2kn2_A	92	Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco	89.01
1k9u_A	78	Polcalcin PHL P 7; pollen allergen, calcium-bindin	85.8
2jnf_A	158	Troponin C; stretch activated muscle contraction,	84.83
3li6_A	66	Calcium-binding protein; calcium signaling protein	84.76
2opo_A	86	Polcalcin CHE A 3; calcium-binding protein, dimer,	84.73
2bl0_C	142	Myosin regulatory light chain; muscle protein, sli	84.28
3rm1_A	92	Protein S100-B; alpha-helical, EF hand, metal bind	84.11
3n22_A	98	Protein S100-A2; EF-hand, calcium-binding, zinc-bi	83.88
2ktg_A	85	Calmodulin, putative; ehcam, Ca-binding protein, p	83.45
2ccm_A	191	Calexcitin; EF hand, calcium, signaling protein; 1	83.27
1k2h_A	93	S100A1, S-100 protein, alpha chain; non-covalent h	83.26
1c7v_A	81	CAVP, calcium vector protein; EF-hand family, calc	83.17
1dtl_A	161	Cardiac troponin C; helix-turn-helix, structural p	83.13
3nxa_A	100	Protein S100-A16; S100 family, calcium binding pro	83.07
2joj_A	77	Centrin protein; N-terminal domain, centrin soluti	82.58
4eto_A	93	Protein S100-A4; calcium-binding protein, EF-hand,	82.56
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	82.48
1tiz_A	67	Calmodulin-related protein, putative; helix-turn-h	82.23
2mys_B	166	Myosin; muscle protein, motor protein; HET: MLY; 2	82.03
3akb_A	166	Putative calcium binding protein; EF-hand, metal b	81.99
2lv7_A	100	Calcium-binding protein 7; metal binding protein;	81.86
2jjz_A	150	Ionized calcium-binding adapter molecule 2; EF-han	81.21
1wdc_C	156	Scallop myosin; calcium binding protein, muscle pr	81.19
3zwh_A	104	Protein S100-A4; Ca-binding protein-motor protein	81.09
2lnk_A	113	Protein S100-A4; EF-hand, calcium binding, all alp	80.71
4drw_A	121	Protein S100-A10/annexin A2 chimeric protein; atyp	80.43
5pal_A	109	Parvalbumin; calcium-binding protein; 1.54A {Triak	80.34
1qx2_A	76	Vitamin D-dependent calcium-binding protein, INTE;	80.02
2mys_C	149	Myosin; muscle protein, motor protein; HET: MLY; 2	80.02

>3dpt_A ROCO, RAB family protein; alpha-beta-protein, signaling protein; 2.90A {Chlorobaculum tepidum}

Probab=97.35  E-value=0.00022  Score=69.50  Aligned_cols=61  Identities=16%  Similarity=0.317  Sum_probs=54.4

Q ss_pred             CCccccHHHHHHHHHHhcCChH-HHHHHHHHhhhcCCeEEe-----CceeeeChHHHHHHHHhhCCC
Q 017853          142 ERNWIPYSEFVRVCEEACSDRE-LGLQFAKSLDDAGNVIVL-----GNVVFLKPEQVTKAIEGVIPL  202 (365)
Q Consensus       142 ~k~~Isy~EF~~lC~e~~~~~~-eA~~~a~~Ld~SG~Vivl-----gd~V~LrP~~V~~~v~~~lpl  202 (365)
                      ++..||++||.++|+++|++.+ +...+++-||+.|+|+.+     .|.|+|+|+=+++.+..++..
T Consensus        31 ~~~~is~~e~~~i~~~~gl~~~~~~~~~l~~LH~lG~il~f~d~~~~d~V~LdP~Wl~~~v~~il~~   97 (332)
T 3dpt_A           31 AQRYLNRTEVEKICNDSGITDPGERKTLLGYLNNLGIVLYFEALDLSEIYVLDPHWVTIGVYRIINS   97 (332)
T ss_dssp             HSSEECHHHHHHHHHHTTCCCHHHHHHHHHHHHHTTSSEECTTTCCSTTCEECHHHHHHHHHHHHHC
T ss_pred             CCCeecHHHHHHHHHHcCCCCHHHHHHHHHHHHHCCEEEEecCCcccCeEEEChHHHHHHHHHHHHH
Confidence            4789999999999999998764 689999999999999998     468999999999988887765

>3dpu_A RAB family protein; roccor, G-domain, COR, GTP-binding, nucleotide-binding, SIGN protein; 2.90A {Chlorobaculum tepidum}

Probab=93.85  E-value=0.079  Score=53.38  Aligned_cols=71  Identities=18%  Similarity=0.317  Sum_probs=57.5

Q ss_pred             HHHHHHhc--cCCccccHHHHHHHHHHhcCC-hHHHHHHHHHhhhcCCeEEe-----CceeeeChHHHHHHHHhhCCCC
Q 017853          133 MVKDRLRM--IERNWIPYSEFVRVCEEACSD-RELGLQFAKSLDDAGNVIVL-----GNVVFLKPEQVTKAIEGVIPLP  203 (365)
Q Consensus       133 ~lk~~L~~--~~k~~Isy~EF~~lC~e~~~~-~~eA~~~a~~Ld~SG~Vivl-----gd~V~LrP~~V~~~v~~~lpl~  203 (365)
                      .++..|..  .+..+|+..+|.++|...+.+ +++...+++.|++.|+++.+     .|.|+|+|.=+++.+..++...
T Consensus       223 ~l~~~l~~~~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~L~~~G~il~f~d~~l~d~vvL~p~Wl~~~v~~ii~~~  301 (535)
T 3dpu_A          223 KVKEKLVEATTAQRYLNRTEVEKICNDSGITDPGERKTLLGYLNNLGIVLYFEALDLSEIYVLDPHWVTIGVYRIINSS  301 (535)
T ss_dssp             HHHHHHHHHHHHSSEECHHHHHHHHHHTTCCCHHHHHHHHHHHHHTTSSBCCTTTCCSSSCEECHHHHHHHHHHHHHCT
T ss_pred             HHHHHHHHhhccCCcccHHHHHHHHHHcCCCCHHHHHHHHHHHHHCcEEEEcCCCCcCCcEEECcHHHHHHHHHHhCCc
Confidence            34444543  237899999999999999885 55568899999999999976     5899999999999888877654

>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}

Probab=92.79  E-value=0.2  Score=38.05  Aligned_cols=55  Identities=15%  Similarity=0.079  Sum_probs=41.0

Q ss_pred             CCcHHHHHHHHHHHhHHHHHHHHhccCCccccHHHHHHHHHHhcCChHHHHHHHHHhhhcC
Q 017853          116 GLTVEEAKKVLRAVKMEMVKDRLRMIERNWIPYSEFVRVCEEACSDRELGLQFAKSLDDAG  176 (365)
Q Consensus       116 ~~tv~e~rkllr~~~ve~lk~~L~~~~k~~Isy~EF~~lC~e~~~~~~eA~~~a~~Ld~SG  176 (365)
                      .+|.++..++.+.-      ..++.++...|+..||..++...|.+.++...+.+.+|..|
T Consensus        20 ~l~~~~~~~l~~~F------~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~D~d~   74 (91)
T 2pmy_A           20 DGDGEELARLRSVF------AACDANRSGRLEREEFRALCTELRVRPADAEAVFQRLDADR   74 (91)
T ss_dssp             HHHHHHHHHHHHHH------HHHCTTCSSSEEHHHHHHHHHHTTCCHHHHHHHHHHHCTTC
T ss_pred             cCCHHHHHHHHHHH------HHHCCCCCCCCcHHHHHHHHHHcCcCHHHHHHHHHHhCCCC
Confidence            45555544443333      56678889999999999999998888888888888887554

>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}

Probab=89.01  E-value=1.1  Score=33.24  Aligned_cols=43  Identities=16%  Similarity=0.285  Sum_probs=30.7

Q ss_pred             CcHHHHHHHHHHHh-------HHHHHHHHhccCCccccHHHHHHHHHHhc
Q 017853          117 LTVEEAKKVLRAVK-------MEMVKDRLRMIERNWIPYSEFVRVCEEAC  159 (365)
Q Consensus       117 ~tv~e~rkllr~~~-------ve~lk~~L~~~~k~~Isy~EF~~lC~e~~  159 (365)
                      |+.+|++.+|+..+       ++.+=..++.++...|+|.||+.++....
T Consensus        26 i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~~~~~~   75 (92)
T 2kn2_A           26 ISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTVR   75 (92)
T ss_dssp             ECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCCSSEEHHHHHHHHHHHT
T ss_pred             EcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhcc
Confidence            66666666666543       34444556778888999999999998753

>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10

Probab=85.80  E-value=1.3  Score=31.72  Aligned_cols=42  Identities=17%  Similarity=0.456  Sum_probs=31.0

Q ss_pred             CcHHHHHHHHHHHh------HHHHHHHHhccCCccccHHHHHHHHHHh
Q 017853          117 LTVEEAKKVLRAVK------MEMVKDRLRMIERNWIPYSEFVRVCEEA  158 (365)
Q Consensus       117 ~tv~e~rkllr~~~------ve~lk~~L~~~~k~~Isy~EF~~lC~e~  158 (365)
                      ||.+|++.+++..+      +..+=..++.++...|+|+||+.++...
T Consensus        20 i~~~el~~~l~~~g~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~~   67 (78)
T 1k9u_A           20 ISLSELTDALRTLGSTSADEVQRMMAEIDTDGDGFIDFNEFISFCNAN   67 (78)
T ss_dssp             ECHHHHHHHHHHHHTCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHC
T ss_pred             CcHHHHHHHHHHhCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHC
Confidence            77777777776654      4445556677788889999999998764

>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A

Probab=84.83  E-value=1.7  Score=34.64  Aligned_cols=60  Identities=10%  Similarity=0.135  Sum_probs=40.6

Q ss_pred             CcHHHHHHHHHHHh-------HHHHHHHHhccCCccccHHHHHHHHHHhc-------CChHHHHHHHHHhhhcC
Q 017853          117 LTVEEAKKVLRAVK-------MEMVKDRLRMIERNWIPYSEFVRVCEEAC-------SDRELGLQFAKSLDDAG  176 (365)
Q Consensus       117 ~tv~e~rkllr~~~-------ve~lk~~L~~~~k~~Isy~EF~~lC~e~~-------~~~~eA~~~a~~Ld~SG  176 (365)
                      ||.+|++++|+..+       +..+-..++.++...|+|.||+.++....       ...+....+-+.+|..|
T Consensus        31 i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~  104 (158)
T 2jnf_A           31 VSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEG  104 (158)
T ss_dssp             EEHHHHHHHHHHTTCSCSHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHCCCCCCTTTTSSTHHHHHHHHCSSS
T ss_pred             CcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccccchhhHHHHHHHHHHHhCCCC
Confidence            77777777776544       45555667778888999999999998753       22344555555665443

>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}

Probab=84.76  E-value=1.8  Score=29.73  Aligned_cols=42  Identities=14%  Similarity=0.248  Sum_probs=31.6

Q ss_pred             CCcHHHHHHHHHHHh-------HHHHHHHHhccCCccccHHHHHHHHHH
Q 017853          116 GLTVEEAKKVLRAVK-------MEMVKDRLRMIERNWIPYSEFVRVCEE  157 (365)
Q Consensus       116 ~~tv~e~rkllr~~~-------ve~lk~~L~~~~k~~Isy~EF~~lC~e  157 (365)
                      .||.+|++.+++..+       ++.+=..++.++...|+|+||..++..
T Consensus        16 ~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~   64 (66)
T 3li6_A           16 AVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS   64 (66)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHTC
T ss_pred             cccHHHHHHHHHHccCCCcHHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence            488888888887654       344455567788889999999998753

>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A

Probab=84.73  E-value=1.8  Score=31.58  Aligned_cols=43  Identities=12%  Similarity=0.264  Sum_probs=30.4

Q ss_pred             CcHHHHHHHHHHHh------HHHHHHHHhccCCccccHHHHHHHHHHhc
Q 017853          117 LTVEEAKKVLRAVK------MEMVKDRLRMIERNWIPYSEFVRVCEEAC  159 (365)
Q Consensus       117 ~tv~e~rkllr~~~------ve~lk~~L~~~~k~~Isy~EF~~lC~e~~  159 (365)
                      |+.+|++.+++..+      ++.+=..++.++...|+|+||+.++....
T Consensus        28 i~~~el~~~l~~~g~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~   76 (86)
T 2opo_A           28 ISSSELGDALKTLGSVTPDEVRRMMAEIDTDGDGFISFDEFTDFARANR   76 (86)
T ss_dssp             EEHHHHHHHHHTTTTCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHCT
T ss_pred             cCHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHCc
Confidence            66677777666543      44455566777888899999999887653

>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=84.28  E-value=3  Score=32.57  Aligned_cols=60  Identities=17%  Similarity=0.266  Sum_probs=39.1

Q ss_pred             CcHHHHHHHHHHHh-------HHHHHHHHhccCCccccHHHHHHHHHHh---cCChHHHHHHHHHhhhcC
Q 017853          117 LTVEEAKKVLRAVK-------MEMVKDRLRMIERNWIPYSEFVRVCEEA---CSDRELGLQFAKSLDDAG  176 (365)
Q Consensus       117 ~tv~e~rkllr~~~-------ve~lk~~L~~~~k~~Isy~EF~~lC~e~---~~~~~eA~~~a~~Ld~SG  176 (365)
                      ||.+|++.+++..+       +..+-..++.++...|+|.||+.++...   ....+....+-+.+|..|
T Consensus        23 i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~   92 (142)
T 2bl0_C           23 ITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTSEDILRQAFRTFDPEG   92 (142)
T ss_dssp             EEHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHTTCCCHHHHHHHHHHTCCSS
T ss_pred             CcHHHHHHHHHHhCCCCCHHHHHHHHHHhCcCCCCeeeHHHHHHHHHHHhcCCChHHHHHHHHHHHCCCC
Confidence            67777777766543       4556666777788889999999988863   123445555555565433

>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...

Probab=84.11  E-value=1.9  Score=32.90  Aligned_cols=42  Identities=17%  Similarity=0.225  Sum_probs=33.7

Q ss_pred             CCcHHHHHHHHHH-----H-------hHHHHHHHHhccCCccccHHHHHHHHHH
Q 017853          116 GLTVEEAKKVLRA-----V-------KMEMVKDRLRMIERNWIPYSEFVRVCEE  157 (365)
Q Consensus       116 ~~tv~e~rkllr~-----~-------~ve~lk~~L~~~~k~~Isy~EF~~lC~e  157 (365)
                      .||.+|++++|+.     .       .++.+=..++.++...|+|+||+.++..
T Consensus        27 ~Is~~EL~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~   80 (92)
T 3rm1_A           27 KLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQEFMAFVAM   80 (92)
T ss_dssp             SBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHH
T ss_pred             eECHHHHHHHHHHHhhhhccCcccHHHHHHHHHHHcCCCCCCCcHHHHHHHHHH
Confidence            4888888888887     2       3556666778889999999999999865

>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}

Probab=83.27  E-value=3.5  Score=34.06  Aligned_cols=58  Identities=16%  Similarity=0.060  Sum_probs=40.5

Q ss_pred             HHHHHhccCCccccHHHHHHHHHHhcCChHHHHHHHHHhhhcCCeEEeCceeeeChHHHHHHHHh
Q 017853          134 VKDRLRMIERNWIPYSEFVRVCEEACSDRELGLQFAKSLDDAGNVIVLGNVVFLKPEQVTKAIEG  198 (365)
Q Consensus       134 lk~~L~~~~k~~Isy~EF~~lC~e~~~~~~eA~~~a~~Ld~SG~Vivlgd~V~LrP~~V~~~v~~  198 (365)
                      +=..++.++...|+++||.+++...|.+++++..+.+.+|..|.=       .+..+++++.+..
T Consensus       114 ~F~~~D~d~dG~I~~~E~~~~l~~~g~~~~~~~~~~~~~D~d~dG-------~i~~~Ef~~~~~~  171 (191)
T 2ccm_A          114 MFDVNDTSGDNIIDKHEYSTVYMSYGIPKSDCDAAFDTLSDGGKT-------MVTREIFARLWTE  171 (191)
T ss_dssp             HHHHHCTTCSSBCCHHHHHHHHHTTTCCHHHHHHHHHHHTTTTTS-------CCBHHHHHHHHHH
T ss_pred             HHHHhCCCCCCcCcHHHHHHHHHHhCCCHHHHHHHHHHhCCCCCC-------CcCHHHHHHHHHH
Confidence            334567788889999999999988888888888888888754321       1344555555554

>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A

Probab=83.26  E-value=2.2  Score=31.51  Aligned_cols=41  Identities=20%  Similarity=0.345  Sum_probs=30.4

Q ss_pred             CcHHHHHHHHHH-----Hh-------HHHHHHHHhccCCccccHHHHHHHHHH
Q 017853          117 LTVEEAKKVLRA-----VK-------MEMVKDRLRMIERNWIPYSEFVRVCEE  157 (365)
Q Consensus       117 ~tv~e~rkllr~-----~~-------ve~lk~~L~~~~k~~Isy~EF~~lC~e  157 (365)
                      |+.+|++.+++.     .+       ++.+=..++.++...|+|+||+.++..
T Consensus        28 I~~~el~~~l~~~~~~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~   80 (93)
T 1k2h_A           28 LSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAA   80 (93)
T ss_dssp             CCHHHHHHHHHHHTHHHHHCCCCHHHHHHHHHHHHHCTTSCCCHHHHHHHHHH
T ss_pred             cCHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            777777777775     33       344445667788889999999999875

>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A

Probab=83.17  E-value=0.53  Score=34.12  Aligned_cols=24  Identities=13%  Similarity=0.102  Sum_probs=17.8

Q ss_pred             HHHhccCCccccHHHHHHHHHHhc
Q 017853          136 DRLRMIERNWIPYSEFVRVCEEAC  159 (365)
Q Consensus       136 ~~L~~~~k~~Isy~EF~~lC~e~~  159 (365)
                      ..++.++...|+|+||+.++....
T Consensus        52 ~~~D~~~dg~i~~~eF~~~~~~~~   75 (81)
T 1c7v_A           52 KEADEDGNGVIDIPEFMDLIKKSK   75 (81)
T ss_dssp             HHHCSSGGGSEEHHHHHHHHHCC-
T ss_pred             HHhCCCCCCcCcHHHHHHHHHhhh
Confidence            345667778899999999887643

>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...

Probab=83.13  E-value=3.2  Score=33.04  Aligned_cols=60  Identities=15%  Similarity=0.235  Sum_probs=39.0

Q ss_pred             CcHHHHHHHHHHHh-------HHHHHHHHhccCCccccHHHHHHHHHHhcC------ChHHHHHHHHHhhhcC
Q 017853          117 LTVEEAKKVLRAVK-------MEMVKDRLRMIERNWIPYSEFVRVCEEACS------DRELGLQFAKSLDDAG  176 (365)
Q Consensus       117 ~tv~e~rkllr~~~-------ve~lk~~L~~~~k~~Isy~EF~~lC~e~~~------~~~eA~~~a~~Ld~SG  176 (365)
                      ||.+|++.+++..+       ++.+=..++.++...|+|.||+.+|.....      ..+....+-+.+|..|
T Consensus        36 i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~  108 (161)
T 1dtl_A           36 ISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNA  108 (161)
T ss_dssp             BCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-----CHHHHHHHHHHHHCTTC
T ss_pred             CcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhcccccchHHHHHHHHHHHhCCCC
Confidence            67777777776543       444556677788889999999999987532      2334444455555443

>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A

Probab=83.07  E-value=1.8  Score=34.34  Aligned_cols=43  Identities=9%  Similarity=0.178  Sum_probs=35.6

Q ss_pred             CCcHHHHHHHHHHH------------hHHHHHHHHhccCCccccHHHHHHHHHHh
Q 017853          116 GLTVEEAKKVLRAV------------KMEMVKDRLRMIERNWIPYSEFVRVCEEA  158 (365)
Q Consensus       116 ~~tv~e~rkllr~~------------~ve~lk~~L~~~~k~~Isy~EF~~lC~e~  158 (365)
                      .||.+|++.+|+..            .++.+=..++.++...|+|+||+.+....
T Consensus        30 ~Is~~EL~~~l~~~~~~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~m~~~   84 (100)
T 3nxa_A           30 KISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDEYWTLIGGI   84 (100)
T ss_dssp             CBCHHHHHHHHHHHSTTTTCSSHHHHHHHHHHHHSCCCSSCCBCHHHHHHHHHHH
T ss_pred             eEcHHHHHHHHHHHccccccccccHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence            49999999999852            36667777788999999999999998764

>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}

Probab=82.58  E-value=1.6  Score=30.96  Aligned_cols=41  Identities=17%  Similarity=0.340  Sum_probs=26.4

Q ss_pred             CcHHHHHHHHHHHh-------HHHHHHHHhccCCccccHHHHHHHHHH
Q 017853          117 LTVEEAKKVLRAVK-------MEMVKDRLRMIERNWIPYSEFVRVCEE  157 (365)
Q Consensus       117 ~tv~e~rkllr~~~-------ve~lk~~L~~~~k~~Isy~EF~~lC~e  157 (365)
                      |+.+|++++++..+       +..+=..++.++...|+|.||++++..
T Consensus        24 i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~   71 (77)
T 2joj_A           24 IDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFLDIMTE   71 (77)
T ss_dssp             EEHHHHHHHHHHHTCCCHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTH
T ss_pred             CcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence            66666666665543       333444556667777888888887754

>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*

Probab=82.56  E-value=2.3  Score=33.07  Aligned_cols=42  Identities=17%  Similarity=0.207  Sum_probs=34.1

Q ss_pred             CCcHHHHHHHHHH------------HhHHHHHHHHhccCCccccHHHHHHHHHH
Q 017853          116 GLTVEEAKKVLRA------------VKMEMVKDRLRMIERNWIPYSEFVRVCEE  157 (365)
Q Consensus       116 ~~tv~e~rkllr~------------~~ve~lk~~L~~~~k~~Isy~EF~~lC~e  157 (365)
                      .||.+|++.+++.            ..++.+=..++.++...|+|+||+.+...
T Consensus        28 ~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~~   81 (93)
T 4eto_A           28 KLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSC   81 (93)
T ss_dssp             SBCHHHHHHHHHHHCGGGC---CCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHH
T ss_pred             eECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHH
Confidence            4899999999884            23666667778899999999999998765

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5

Probab=82.48  E-value=4.6  Score=32.48  Aligned_cols=77  Identities=16%  Similarity=0.107  Sum_probs=53.3

Q ss_pred             CCcHHHHHHHHHHH---------------hHHHHHHHHhccCCccccHHHHHHHHHHhcCChHHHHHHHHHhhhcCCeEE
Q 017853          116 GLTVEEAKKVLRAV---------------KMEMVKDRLRMIERNWIPYSEFVRVCEEACSDRELGLQFAKSLDDAGNVIV  180 (365)
Q Consensus       116 ~~tv~e~rkllr~~---------------~ve~lk~~L~~~~k~~Isy~EF~~lC~e~~~~~~eA~~~a~~Ld~SG~Viv  180 (365)
                      .||.+|+..++...               .+..+=..++.++...|+..||.+++...|.+++++..+.+.+|..|.=  
T Consensus        74 ~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g~~~~~~~~~~~~~D~d~dg--  151 (176)
T 1nya_A           74 SLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALGMSKAEAAEAFNQVDTNGNG--  151 (176)
T ss_dssp             CBCHHHHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTTCCHHHHHHHHHHHCTTCSS--
T ss_pred             eEcHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHhCCCHHHHHHHHHHhCCCCCC--
Confidence            37777777766543               2344445567788999999999999999888888999888888755421  


Q ss_pred             eCceeeeChHHHHHHHHhh
Q 017853          181 LGNVVFLKPEQVTKAIEGV  199 (365)
Q Consensus       181 lgd~V~LrP~~V~~~v~~~  199 (365)
                           .+..++..+.+...
T Consensus       152 -----~i~~~ef~~~~~~~  165 (176)
T 1nya_A          152 -----ELSLDELLTAVRDF  165 (176)
T ss_dssp             -----EEEHHHHHHHHSCC
T ss_pred             -----CCcHHHHHHHHHHH
Confidence                 23445555555543

>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5

Probab=82.23  E-value=1.7  Score=29.74  Aligned_cols=41  Identities=17%  Similarity=0.222  Sum_probs=25.0

Q ss_pred             CcHHHHHHHHHHHh-------HHHHHHHHhccCCccccHHHHHHHHHH
Q 017853          117 LTVEEAKKVLRAVK-------MEMVKDRLRMIERNWIPYSEFVRVCEE  157 (365)
Q Consensus       117 ~tv~e~rkllr~~~-------ve~lk~~L~~~~k~~Isy~EF~~lC~e  157 (365)
                      |+.+|++.+++..+       +..+=..++.++...|+|+||++++..
T Consensus        18 i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~   65 (67)
T 1tiz_A           18 LSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK   65 (67)
T ss_dssp             EEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred             CcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence            55555555555432       333444556677778888888887753

>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B

Probab=82.03  E-value=1.1  Score=36.24  Aligned_cols=37  Identities=11%  Similarity=-0.138  Sum_probs=21.3

Q ss_pred             HHhccCCccccHHHHHHHHHHhc--CChHHHHHHHHHhh
Q 017853          137 RLRMIERNWIPYSEFVRVCEEAC--SDRELGLQFAKSLD  173 (365)
Q Consensus       137 ~L~~~~k~~Isy~EF~~lC~e~~--~~~~eA~~~a~~Ld  173 (365)
                      .++.++...|+.+||.+++...|  .+++++..+.+.+|
T Consensus       103 ~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D  141 (166)
T 2mys_B          103 VLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFP  141 (166)
T ss_pred             HhCCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHHhcC
Confidence            34555666666666666666554  35555555555554

>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A

Probab=81.99  E-value=4.2  Score=32.29  Aligned_cols=57  Identities=14%  Similarity=0.084  Sum_probs=39.0

Q ss_pred             HHHhccCCccccHHHHHHHHHHhcCChHHHHHHHHHhhhcCCeEEeCceeeeChHHHHHHHHhh
Q 017853          136 DRLRMIERNWIPYSEFVRVCEEACSDRELGLQFAKSLDDAGNVIVLGNVVFLKPEQVTKAIEGV  199 (365)
Q Consensus       136 ~~L~~~~k~~Isy~EF~~lC~e~~~~~~eA~~~a~~Ld~SG~Vivlgd~V~LrP~~V~~~v~~~  199 (365)
                      ..++.++...|+.+||.+++...|.+.+++..+.+.+|..|.       =.+..++.+..+...
T Consensus       105 ~~~D~d~~G~i~~~E~~~~l~~~~~~~~~~~~~~~~~D~d~d-------g~i~~~ef~~~~~~~  161 (166)
T 3akb_A          105 GVADTDGDGAVTVADTARALTAFGVPEDLARQAAAALDTDGD-------GKVGETEIVPAFARY  161 (166)
T ss_dssp             HHHCSSSSSCCBHHHHHHHHHHTTCCHHHHHHHHHHHCTTCS-------SBCCHHHHHHHHHHH
T ss_pred             HHhCCCCCCcCCHHHHHHHHHHhCCCHHHHHHHHHHhCCCCC-------CcCcHHHHHHHHHHH
Confidence            455677888899999999998888888888888887765432       124445555555443

>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}

Probab=81.86  E-value=1.7  Score=34.22  Aligned_cols=22  Identities=27%  Similarity=0.490  Sum_probs=11.1

Q ss_pred             HHHHHHhccCCccccHHHHHHH
Q 017853          133 MVKDRLRMIERNWIPYSEFVRV  154 (365)
Q Consensus       133 ~lk~~L~~~~k~~Isy~EF~~l  154 (365)
                      .+=..++.++...|+|+||+++
T Consensus        76 ~l~~~~D~d~dG~I~~~EF~~~   97 (100)
T 2lv7_A           76 VIIQRLDMDGDGQVDFEEFVTL   97 (100)
T ss_dssp             HHHHHHCSSCSSSBCHHHHHHH
T ss_pred             HHHHHHCCCCCCeEeHHHHHHH
Confidence            3334445555555555555544

>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A

Probab=81.21  E-value=1.8  Score=35.69  Aligned_cols=57  Identities=14%  Similarity=0.233  Sum_probs=35.8

Q ss_pred             CcHHHHHHHHHHHh-------HHHHHHHHhccCCccccHHHHHHHHHHhcCChHHHHHHHHHhhhcC
Q 017853          117 LTVEEAKKVLRAVK-------MEMVKDRLRMIERNWIPYSEFVRVCEEACSDRELGLQFAKSLDDAG  176 (365)
Q Consensus       117 ~tv~e~rkllr~~~-------ve~lk~~L~~~~k~~Isy~EF~~lC~e~~~~~~eA~~~a~~Ld~SG  176 (365)
                      ||.+|++.+|+..+       ++.+=..++.++...|+|+||+.++...   .++..++-+.+|..|
T Consensus        67 I~~~el~~~l~~~g~~~~~~e~~~l~~~~D~d~dg~I~~~eF~~~~~~~---~~~i~~aF~~~D~d~  130 (150)
T 2jjz_A           67 IDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMMLGK---RSAVLKLVMMFEGKA  130 (150)
T ss_dssp             BCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSCSSBCHHHHHHHHHSS---SCCHHHHHHC-----
T ss_pred             CCHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHh---HHHHHHHHHHHcCCC
Confidence            77777777776543       4445556677788899999999999764   234444445555443

>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...

Probab=81.19  E-value=1  Score=36.02  Aligned_cols=41  Identities=17%  Similarity=0.250  Sum_probs=22.7

Q ss_pred             CcHHHHHHHHHHHh-------HHHHHHHHhccCCccccHHHHHHHHHHh
Q 017853          117 LTVEEAKKVLRAVK-------MEMVKDRLRMIERNWIPYSEFVRVCEEA  158 (365)
Q Consensus       117 ~tv~e~rkllr~~~-------ve~lk~~L~~~~k~~Isy~EF~~lC~e~  158 (365)
                      ||.+|++.+|+..+       +..+ ..++.++...|+|.||+.++...
T Consensus        28 i~~~el~~~l~~~g~~~~~~~~~~l-~~~D~~~~g~i~~~eF~~~~~~~   75 (156)
T 1wdc_C           28 VDAFKLGDVCRCLGINPRNEDVFAV-GGTHKMGEKSLPFEEFLPAYEGL   75 (156)
T ss_dssp             EEGGGHHHHHHHTTCCCCHHHHHHT-TCCSSTTSCEECHHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHcCCCCCHHHHHHH-HhhCCCCCCeeeHHHHHHHHHHH
Confidence            44555555544322       3334 34455666677777777777664

>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens}

Probab=81.09  E-value=2.7  Score=33.73  Aligned_cols=42  Identities=17%  Similarity=0.232  Sum_probs=34.2

Q ss_pred             CCcHHHHHHHHHH------------HhHHHHHHHHhccCCccccHHHHHHHHHH
Q 017853          116 GLTVEEAKKVLRA------------VKMEMVKDRLRMIERNWIPYSEFVRVCEE  157 (365)
Q Consensus       116 ~~tv~e~rkllr~------------~~ve~lk~~L~~~~k~~Isy~EF~~lC~e  157 (365)
                      .||.+|++.+|+.            ..++.+=..++.++...|+|+||+.+...
T Consensus        31 ~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~m~~   84 (104)
T 3zwh_A           31 KLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSS   84 (104)
T ss_dssp             SBCHHHHHHHHHHHCGGGSCSSCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             eECHHHHHHHHHHHcchhccCCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHH
Confidence            3899999999984            23666667788899999999999998765

>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A

Probab=80.71  E-value=2.4  Score=34.65  Aligned_cols=41  Identities=17%  Similarity=0.221  Sum_probs=33.1

Q ss_pred             CcHHHHHHHHHH------------HhHHHHHHHHhccCCccccHHHHHHHHHH
Q 017853          117 LTVEEAKKVLRA------------VKMEMVKDRLRMIERNWIPYSEFVRVCEE  157 (365)
Q Consensus       117 ~tv~e~rkllr~------------~~ve~lk~~L~~~~k~~Isy~EF~~lC~e  157 (365)
                      ||.+|++.+|+.            ..++.+=..++.++...|+|+||+.+...
T Consensus        41 Is~~EL~~~l~~~l~~~lg~~~t~~ev~~li~~~D~dgdG~Idf~EF~~~m~~   93 (113)
T 2lnk_A           41 LNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSC   93 (113)
T ss_dssp             BCHHHHHHHHHHHCGGGGTTCCCTTHHHHHHHHHCSSSSSCBCHHHHHHHHHH
T ss_pred             ECHHHHHHHHHHHcchhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence            888888888875            13566667778889999999999998765

>4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens}

Probab=80.43  E-value=1.7  Score=36.25  Aligned_cols=42  Identities=12%  Similarity=0.241  Sum_probs=32.9

Q ss_pred             CCcHHHHHHHHHH------------HhHHHHHHHHhccCCccccHHHHHHHHHH
Q 017853          116 GLTVEEAKKVLRA------------VKMEMVKDRLRMIERNWIPYSEFVRVCEE  157 (365)
Q Consensus       116 ~~tv~e~rkllr~------------~~ve~lk~~L~~~~k~~Isy~EF~~lC~e  157 (365)
                      .||.+|++++|+.            ..+..+=..++.++-..|+|+||+.+...
T Consensus        30 ~Is~~EL~~~l~~~~~~~l~~~~~~~~v~~~i~~~D~d~DG~IdF~EF~~lm~~   83 (121)
T 4drw_A           30 YLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAG   83 (121)
T ss_dssp             SCCHHHHHHHTTTSCHHHHTTSSCTTHHHHHHHHHCTTCSSCCCHHHHHHHHHH
T ss_pred             EEcHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence            4888888888764            34566677788999999999999987543

>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4

Probab=80.34  E-value=2.1  Score=32.52  Aligned_cols=22  Identities=14%  Similarity=0.057  Sum_probs=12.9

Q ss_pred             HHHhccCCccccHHHHHHHHHH
Q 017853          136 DRLRMIERNWIPYSEFVRVCEE  157 (365)
Q Consensus       136 ~~L~~~~k~~Isy~EF~~lC~e  157 (365)
                      ..++.++...|+|+||++++.+
T Consensus        87 ~~~D~~~dg~i~~~eF~~~~~~  108 (109)
T 5pal_A           87 AAGDSDHDGKIGADEFAKMVAQ  108 (109)
T ss_dssp             HHHCTTCSSSEEHHHHHHHHHH
T ss_pred             HHhCCCCCCcCcHHHHHHHHHh
Confidence            3445556666666666666543

>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A

Probab=80.02  E-value=2.9  Score=29.36  Aligned_cols=41  Identities=15%  Similarity=0.322  Sum_probs=27.0

Q ss_pred             CcHHHHHHHHHHHh---------HHHHHHHHhccCCccccHHHHHHHHHH
Q 017853          117 LTVEEAKKVLRAVK---------MEMVKDRLRMIERNWIPYSEFVRVCEE  157 (365)
Q Consensus       117 ~tv~e~rkllr~~~---------ve~lk~~L~~~~k~~Isy~EF~~lC~e  157 (365)
                      |+.+|++.+++..+         +..+=..++.++...|+|.||+.++..
T Consensus        24 i~~~el~~~l~~~g~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~   73 (76)
T 1qx2_A           24 ISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKK   73 (76)
T ss_dssp             EEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred             ECHHHHHHHHHHhCCCcCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence            66666666666543         233444556677788888888888764

>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*

Probab=80.02  E-value=6  Score=30.74  Aligned_cols=74  Identities=16%  Similarity=0.209  Sum_probs=41.8

Q ss_pred             CcHHHHHHHHHHHh-------HHHHHHHH---hccCCccccHHHHHHHHHHh--c---CChHHHHHHHHHhhhcCCeEEe
Q 017853          117 LTVEEAKKVLRAVK-------MEMVKDRL---RMIERNWIPYSEFVRVCEEA--C---SDRELGLQFAKSLDDAGNVIVL  181 (365)
Q Consensus       117 ~tv~e~rkllr~~~-------ve~lk~~L---~~~~k~~Isy~EF~~lC~e~--~---~~~~eA~~~a~~Ld~SG~Vivl  181 (365)
                      ||.+|++.+++..+       +..+-..+   +.++ ..|+|.||+.++...  .   ...+....+-+.+|..|.    
T Consensus        25 i~~~el~~~l~~~~~~~~~~~~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~----   99 (149)
T 2mys_C           25 ITASQVGDIARALGQNPTNAEINKILGNPSKEEMNA-AAITFEEFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGN----   99 (149)
T ss_pred             CcHHHHHHHHHHhCCCCCHHHHHHHHHHhhhccccC-CcCcHHHHHHHHHHHhccCCcchHHHHHHHHHHhCCCCC----
Confidence            55556655555432       33344445   6677 899999999999875  1   223444444555554432    


Q ss_pred             CceeeeChHHHHHHHHh
Q 017853          182 GNVVFLKPEQVTKAIEG  198 (365)
Q Consensus       182 gd~V~LrP~~V~~~v~~  198 (365)
                         =++..+++...+..
T Consensus       100 ---G~i~~~el~~~l~~  113 (149)
T 2mys_C          100 ---GTVMGAELRHVLAT  113 (149)
T ss_pred             ---ceEcHHHHHHHHHH
Confidence               23455555555543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	365
d2opoa1	81	Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta	89.99
d1avsa_	81	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	82.08
d1f54a_	77	Calmodulin {Baker's yeast (Saccharomyces cerevisia	81.81
d1qx2a_	76	Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}	80.81
d2pq3a1	73	Calmodulin {Rattus norvegicus [TaxId: 10116]}	80.27

>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Polcalcin
domain: Polcalcin Che a 3
species: Pigweed (Chenopodium album) [TaxId: 3559]

Probab=89.99  E-value=0.25  Score=35.94  Aligned_cols=49  Identities=10%  Similarity=0.152  Sum_probs=34.0

Q ss_pred             CcHHHHHHHHHHHh------HHHHHHHHhccCCccccHHHHHHHHHHhcCChHHH
Q 017853          117 LTVEEAKKVLRAVK------MEMVKDRLRMIERNWIPYSEFVRVCEEACSDRELG  165 (365)
Q Consensus       117 ~tv~e~rkllr~~~------ve~lk~~L~~~~k~~Isy~EF~~lC~e~~~~~~eA  165 (365)
                      |+.+|++.+|+..+      ++.+=..++.++...|+|.||+.++.......+++
T Consensus        23 I~~~El~~~l~~lg~~~~~ei~~~~~~~D~d~~G~I~~~EF~~~~~~~~~~~~e~   77 (81)
T d2opoa1          23 ISSSELGDALKTLGSVTPDEVRRMMAEIDTDGDGFISFDEFTDFARANRGLVKDV   77 (81)
T ss_dssp             EEHHHHHHHHHTTTTCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHCTTTHHHH
T ss_pred             CcHHHHHHHHHHhhcCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHCccchHHH
Confidence            66666666666543      44455566889999999999999998764433443

>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=82.08  E-value=0.86  Score=32.90  Aligned_cols=38  Identities=13%  Similarity=-0.008  Sum_probs=20.8

Q ss_pred             HhccCCccccHHHHHHHHHHhc--CChHHHHHHHHHhhhc
Q 017853          138 LRMIERNWIPYSEFVRVCEEAC--SDRELGLQFAKSLDDA  175 (365)
Q Consensus       138 L~~~~k~~Isy~EF~~lC~e~~--~~~~eA~~~a~~Ld~S  175 (365)
                      .+.++...|+..||.+++...|  .++++..++.+.+|..
T Consensus        23 ~D~d~~G~I~~~el~~~l~~~g~~~s~~e~~~~~~~~D~d   62 (81)
T d1avsa_          23 FDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDED   62 (81)
T ss_dssp             HCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTT
T ss_pred             HcCCCCCeEchhHHHHHHHHcCCCCCHHHHHHHHHHhCCC
Confidence            4555666666666666666554  2444555555555443

>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=81.81  E-value=1.8  Score=30.51  Aligned_cols=55  Identities=18%  Similarity=0.108  Sum_probs=38.7

Q ss_pred             CCcHHHHHHHHHHHhHHHHHHHHhccCCccccHHHHHHHHHHhcC--ChHHHHHHHHHhhhcC
Q 017853          116 GLTVEEAKKVLRAVKMEMVKDRLRMIERNWIPYSEFVRVCEEACS--DRELGLQFAKSLDDAG  176 (365)
Q Consensus       116 ~~tv~e~rkllr~~~ve~lk~~L~~~~k~~Isy~EF~~lC~e~~~--~~~eA~~~a~~Ld~SG  176 (365)
                      .+|.+++..+-.+-      ..++.++...|+..||..++...|.  ++++...+.+.+|..|
T Consensus         3 ~lt~eqi~el~~~F------~~~D~d~~G~I~~~el~~~l~~~g~~~t~~e~~~~~~~~D~~~   59 (77)
T d1f54a_           3 NLTEEQIAEFKEAF------ALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDG   59 (77)
T ss_dssp             CCCHHHHHHHHHHH------HHTCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHTTCCSS
T ss_pred             CCCHHHHHHHHHHH------HHHcCCCCCeEChHHHHHHHHHhCCCCCHHHHHHHHHHhCCCC
Confidence            57777766654443      5567888888888888888888764  5567777777766544

>d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Cow (Bos taurus) [TaxId: 9913]

Probab=80.81  E-value=0.98  Score=32.04  Aligned_cols=42  Identities=14%  Similarity=0.306  Sum_probs=33.3

Q ss_pred             CCcHHHHHHHHHHHh---------HHHHHHHHhccCCccccHHHHHHHHHH
Q 017853          116 GLTVEEAKKVLRAVK---------MEMVKDRLRMIERNWIPYSEFVRVCEE  157 (365)
Q Consensus       116 ~~tv~e~rkllr~~~---------ve~lk~~L~~~~k~~Isy~EF~~lC~e  157 (365)
                      .||.+|++.+|+..+         +..+=..++.++...|+|+||+++...
T Consensus        23 ~I~~~El~~~l~~lg~~~~~~~~ei~~~~~~~D~d~dG~I~f~EF~~~m~~   73 (76)
T d1qx2a_          23 QISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKK   73 (76)
T ss_dssp             SEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred             EECHHHHHHHHHHhCCcCCCCHHHHHHHHHHhhcCCCCcCcHHHHHHHHHH
Confidence            389999999988642         555667778889999999999998754

>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Rattus norvegicus [TaxId: 10116]

Probab=80.27  E-value=2.1  Score=29.92  Aligned_cols=42  Identities=14%  Similarity=0.048  Sum_probs=33.0

Q ss_pred             HHHhccCCccccHHHHHHHHHHhcC--ChHHHHHHHHHhhhcCC
Q 017853          136 DRLRMIERNWIPYSEFVRVCEEACS--DRELGLQFAKSLDDAGN  177 (365)
Q Consensus       136 ~~L~~~~k~~Isy~EF~~lC~e~~~--~~~eA~~~a~~Ld~SG~  177 (365)
                      ..++.++...|++.||..+|...|.  ++++...+.+.+|..|.
T Consensus        15 ~~~D~d~~G~I~~~el~~~l~~~g~~~s~~~~~~~~~~~D~d~~   58 (73)
T d2pq3a1          15 SLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN   58 (73)
T ss_dssp             HHTCTTSSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTCS
T ss_pred             HHHcCCCCceEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCC
Confidence            4567889999999999999988774  67778888887776553