Citrus Sinensis ID: 017940

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360---
Protein Sequence
MKSCNEWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKNKEMQNCVSKVTQEAEDIKEQEPQLPVITVSAAADCP
Secondary Structure (PSIPRED)
ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHccHHHHHHHHccccccccccccccccEEEEEEEEEEHHHEHHHHHccccccccccccHHHHHHcccccccccccccccccEEEEEccEEEcEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHEEEcHHHHHHHcccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHEHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccccHEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHccccccccccccccccccccccEccccccccc
Coil and Loop (DISEMBL)
MKSCNEWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLApigyfwernsrpklTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALpfgletvdikgisgkaKVVGTLVCIGGAMLLTlykgmplfdhsysQAETAINVmhmhptrkterwtFGTIALTVGTLlwaswfpiqsyigkrypckyssTAILSLFGAIQAAILCLATnrnhsawsfkGKIEIISVLYAGIVGSGLcyvgltwcvkkkgpvftaaFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKNKEMQNCVSKVTQEAEdikeqepqlpvitvsaaadcp
Flexible Loop (DISEMBL)
MKSCNEWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKNKEMQNCVSKVTQEAedikeqepqlpvitvsaaadcp
Low Complexity Region (SEG)
MKSCNEWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKNKEMQNCVSKVTQEAEDIKEQEPQLPVITVSAAADCP
Disordered region (IsUnstruct)
****NEWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKNKEMQNCV*****************************
Disordered Region (DISOPRED)
*****EW**LIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSY*******************RWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWG**************************************
Disordered Region (DISEMBL)
MKSCNEWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKNKEMQNCVSKVTQEAEDIKEQEPQLPVITVSAAADCP
Disordered Region (DISPRO)
*KSCNEWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHS********************RWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKNK***********************************
Transmembrane Helix (TMHMM)
oooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKSCNEWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKxxxxxxxxxxxxxxxxxxxxxEPQLPVITVSAAADCP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	363	2.2.26 [Sep-21-2011]
Q9LI65	364	WAT1-related protein At3g	yes	no	0.922	0.920	0.483	6e-96
Q9M130	365	WAT1-related protein At4g	no	no	0.920	0.915	0.474	2e-88
Q5XEZ0	365	WAT1-related protein At1g	no	no	0.964	0.958	0.396	9e-74
Q9M131	365	WAT1-related protein At4g	no	no	0.994	0.989	0.390	2e-72
Q500Z4	352	WAT1-related protein At1g	no	no	0.944	0.974	0.376	2e-70
F4I8W6	337	WAT1-related protein At1g	no	no	0.903	0.973	0.394	1e-69
Q9M129	361	WAT1-related protein At4g	no	no	0.884	0.889	0.439	6e-67
Q8GXB4	374	WAT1-related protein At1g	no	no	0.922	0.895	0.376	3e-65
Q9LV20	383	WAT1-related protein At3g	no	no	0.920	0.872	0.366	2e-60
Q9FL41	402	WAT1-related protein At5g	no	no	0.942	0.850	0.358	1e-59

>sp|Q9LI65|WTR24_ARATH WAT1-related protein At3g30340 OS=Arabidopsis thaliana GN=At3g30340 PE=2 SV=1

 Score =  351 bits (900), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 164/339 (48%), Positives = 241/339 (71%), Gaps = 4/339 (1%)

Query: 7   WKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPK 66
           WK ++ M  +  G + VN+  KK+++EG+N +V  T RL V T+ L P   F ER++RPK
Sbjct: 9   WKAVLMMSMINIGLSVVNVMFKKMIDEGLNRMVATTYRLAVGTLFLIPFAIFLERHNRPK 68

Query: 67  LTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVD 126
           LT RIL  LFFSA++GTSL QYFFL+G++YTS+TF+ AF NMVP +TF +AL F  ET++
Sbjct: 69  LTGRILCSLFFSALLGTSLVQYFFLIGLEYTSSTFSLAFSNMVPSVTFALALVFRQETLN 128

Query: 127 IKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFG 186
           IK   G+AK++GT++CI GA++LTLYKG  L     +  ET            T++W  G
Sbjct: 129 IKSNVGRAKLLGTMICICGALVLTLYKGTALSREHSTHMETHTRTDSTGAM--TQKWAMG 186

Query: 187 TIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFK 246
           +I L +  ++W+SWF +Q+ I + YPC+Y+ST ILS FG IQ+A+L L + R+ S W  K
Sbjct: 187 SIMLVISIIIWSSWFIVQAKISRVYPCQYTSTTILSFFGVIQSALLSLISERSTSMWVVK 246

Query: 247 GKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHI 306
            K +++++LY+GIVGSGLCYVG++WC++++G VFT++F PL+Q+ AA+F    LHE+++ 
Sbjct: 247 DKFQVLALLYSGIVGSGLCYVGMSWCLRQRGAVFTSSFIPLIQVFAAIFSFSFLHEQIYC 306

Query: 307 GSLLGSITVIIGLYILLWGKNKEMQNCVSKVTQEAEDIK 345
           GS++GS+ +I+GLYILLWGK+K+    V+K  QE  D+ 
Sbjct: 307 GSVIGSMVIIVGLYILLWGKSKDKSASVTK--QEPLDLD 343

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M130|WTR29_ARATH WAT1-related protein At4g01440 OS=Arabidopsis thaliana GN=At4g01440 PE=2 SV=1

 Score =  326 bits (835), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 161/339 (47%), Positives = 228/339 (67%), Gaps = 5/339 (1%)

Query: 1   MKSCN-EWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFW 59
           M  C+ +W P+I M+ +       N  +KKVL+ G+N +V  T RL ++T+ LAPI +FW
Sbjct: 1   MGYCDGKWTPVIIMVMINSALGLANALVKKVLDGGVNHMVIATYRLAISTLFLAPIAFFW 60

Query: 60  ERNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALP 119
           ER +RP LTL IL  LFFSA+VG SLTQYFFLLG+ YTSAT ACAFI+M P ITFV+AL 
Sbjct: 61  ERKTRPTLTLNILVQLFFSALVGASLTQYFFLLGLSYTSATLACAFISMTPAITFVMALI 120

Query: 120 FGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRK 179
           F +E +++K  +G   V+G L+CIGGA+LLT+YKG+PL      +    IN  H     K
Sbjct: 121 FRVEKLNMKSKAGMGMVMGALICIGGALLLTMYKGVPLTKLRKLETHQLINNNH---AMK 177

Query: 180 TERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRN 239
            E W  G + L  G+  + SW  IQ+ + ++YPC+YSST +LS FG IQ A+L L  +R+
Sbjct: 178 PENWIIGCVLLFAGSSCFGSWMLIQAKVNEKYPCQYSSTVVLSFFGTIQCALLSLIKSRD 237

Query: 240 HSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPL 299
            +AW    K++I++++YAG V  G+C VG +WC++K+GP+FT+ F+P+  I A +FD  +
Sbjct: 238 ITAWILTDKLDIVTIVYAGAVAQGICTVGTSWCIRKRGPIFTSIFTPVGLIFATLFDFLI 297

Query: 300 LHERLHIGSLLGSITVIIGLYILLWGKNKEM-QNCVSKV 337
           LH ++ +GS++GS  VI GLYI L GK + M + C  K+
Sbjct: 298 LHRQIFLGSVVGSGVVIFGLYIFLLGKVRLMKEECEKKL 336

Arabidopsis thaliana (taxid: 3702)

>sp|Q5XEZ0|WTR1_ARATH WAT1-related protein At1g01070 OS=Arabidopsis thaliana GN=At1g01070 PE=2 SV=1

 Score =  277 bits (708), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 143/361 (39%), Positives = 217/361 (60%), Gaps = 11/361 (3%)

Query: 1   MKSCNEWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWE 60
           ++   ++ P+I M+       +VN  +KK L+ G+N +V    R+ ++ ++L P  Y  E
Sbjct: 8   VRVVEKYSPVIVMVMSNVAMGSVNALVKKALDVGVNHMVIGAYRMAISALILVPFAYVLE 67

Query: 61  RNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPF 120
           R +RP++T R++   F S ++G SL Q+FFLLG+ YTSAT +CA ++M+P ITF +AL F
Sbjct: 68  RKTRPQITFRLMVDHFVSGLLGASLMQFFFLLGLSYTSATVSCALVSMLPAITFALALIF 127

Query: 121 GLETVDI-KGISGKAKVVGTLVCIGGAMLLTLYKGMPLFD-HSYSQAETAINVMHMHPTR 178
             E V I K  +G  KV+GTL+CI GA+ LT YKG  + + HS+S    + N    +   
Sbjct: 128 RTENVKILKTKAGMLKVIGTLICISGALFLTFYKGPQISNSHSHSHGGASHN---NNDQD 184

Query: 179 KTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNR 238
           K   W  G + LT+GT+L + W   Q  +  +YPCKYSST ++S+F A Q A+L L  +R
Sbjct: 185 KANNWLLGCLYLTIGTVLLSLWMLFQGTLSIKYPCKYSSTCLMSIFAAFQCALLSLYKSR 244

Query: 239 NHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIP 298
           + + W    +  I  ++YAG+VG  +  V  TW +KK G VF +AF PL  I A +FD  
Sbjct: 245 DVNDWIIDDRFVITVIIYAGVVGQAMTTVATTWGIKKLGAVFASAFFPLTLISATLFDFL 304

Query: 299 LLHERLHIGSLLGSITVIIGLYILLWGKNKEMQNCV---SKVTQEAEDI---KEQEPQLP 352
           +LH  L++GS++GS+  I GLY+ LWGKNKE ++     S +  EA+     K+ + + P
Sbjct: 305 ILHTPLYLGSVIGSLVTITGLYMFLWGKNKETESSTALSSGMDNEAQYTTPNKDNDSKSP 364

Query: 353 V 353
           V
Sbjct: 365 V 365

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M131|WTR28_ARATH WAT1-related protein At4g01430 OS=Arabidopsis thaliana GN=At4g01430 PE=2 SV=1

 Score =  273 bits (697), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 143/366 (39%), Positives = 216/366 (59%), Gaps = 5/366 (1%)

Query: 1   MKSCNEWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWE 60
           M    +W P+I M+       +VN  +KK L+ G+N ++F   R+ ++ ++L P  Y WE
Sbjct: 1   MMKEEQWAPVIVMLISSVAMGSVNALVKKALDVGVNHMIFGAYRMAISALILVPFSYIWE 60

Query: 61  RNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPF 120
           R +RP+LT  +L   F S ++G SL Q+FFLLG+ YTSAT + A ++M+P ITF +AL F
Sbjct: 61  RKTRPQLTFMLLCEHFISGLLGASLMQFFFLLGLSYTSATVSMALVSMLPAITFALALIF 120

Query: 121 GLETV-DIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFD-HSYSQAETAINVMHMHPTR 178
            +E   ++K  +G  KV+GTL+CI GAMLLT YKG  L + HS+ QA    N  + H   
Sbjct: 121 RIENAQNLKSKAGVLKVMGTLICIMGAMLLTFYKGPELSNPHSHPQARHNNNNNNGHD-- 178

Query: 179 KTERWTFGTIALTVGTLLWASWFPIQSYIGKRYP-CKYSSTAILSLFGAIQAAILCLATN 237
           +T++W  G + L +GT+L + W   Q  +  +YP  KYSST ++S+F + Q AIL L  +
Sbjct: 179 QTKKWLLGCLYLVIGTVLLSLWMLFQGKLSFKYPGNKYSSTCLMSVFASFQCAILSLYKS 238

Query: 238 RNHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDI 297
           R+   W  + K  I+  LYAGIVG  +  V  +W +K  G VF + FSP+  + A +FD 
Sbjct: 239 RDVKDWIIEDKFVILVTLYAGIVGQAMSTVVTSWSIKMTGAVFVSTFSPVSLVAATLFDF 298

Query: 298 PLLHERLHIGSLLGSITVIIGLYILLWGKNKEMQNCVSKVTQEAEDIKEQEPQLPVITVS 357
            +LH  L++GS+LGS+  I GLY+ LWG+  E    VSK    ++  + ++ +   I   
Sbjct: 299 LILHSPLYLGSILGSVVTITGLYVFLWGRKNETDQSVSKTLNSSQFSQNKDNEDHTIANH 358

Query: 358 AAADCP 363
              + P
Sbjct: 359 KDTNLP 364

Arabidopsis thaliana (taxid: 3702)

>sp|Q500Z4|WTR3_ARATH WAT1-related protein At1g11450 OS=Arabidopsis thaliana GN=At1g11450 PE=2 SV=2

 Score =  266 bits (680), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 131/348 (37%), Positives = 209/348 (60%), Gaps = 5/348 (1%)

Query: 1   MKSCNEWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWE 60
           +K  ++W P+I M+  +    +VN  +KK L+ G+N ++    R+ +++ +L PI YF E
Sbjct: 8   VKVVSKWPPMIVMVTSQVAMGSVNALVKKALDVGVNHMIIGAYRMAISSFILVPIAYFLE 67

Query: 61  RNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPF 120
           R   PK+T R++   F S ++G SL Q+F+LLG+ YTSAT ACA ++++P ITF  AL  
Sbjct: 68  RKIIPKITFRLMVDHFISGLLGASLMQFFYLLGLSYTSATVACALVSLMPAITFAFALIL 127

Query: 121 GLETV-DIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRK 179
             E + D+K  +G  KV+GTL+CI GA+ LT YKG P   +S+S  E    + H +    
Sbjct: 128 RTEKIKDLKTQAGMIKVMGTLICISGALFLTFYKG-PHISNSHSHLEA---LPHNNSDHN 183

Query: 180 TERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRN 239
           T+ W  G + L +G +L + W   Q  +  +YPCK+SST ++S+F A Q A+L L  +R+
Sbjct: 184 TKNWLLGCLYLVIGIVLLSLWILFQGTLSIKYPCKFSSTCLMSIFAAFQCALLSLYKSRD 243

Query: 240 HSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPL 299
              W       I  ++YAG++G  +  V  TW + + G VF +A  P+  I A +FD  +
Sbjct: 244 LKHWIIDDGFVIGVIIYAGVIGQAMSTVAATWGINRLGAVFASAIMPVSLISATLFDFLI 303

Query: 300 LHERLHIGSLLGSITVIIGLYILLWGKNKEMQNCVSKVTQEAEDIKEQ 347
           LH  L++GS++GS+  IIGLY+ LWGKNKE +  ++ ++    +  ++
Sbjct: 304 LHTPLYLGSVIGSVGTIIGLYVFLWGKNKETEADITTLSSRMNNEDQR 351

Arabidopsis thaliana (taxid: 3702)

>sp|F4I8W6|WTR4_ARATH WAT1-related protein At1g11460 OS=Arabidopsis thaliana GN=At1g11460 PE=3 SV=1

 Score =  263 bits (673), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 131/332 (39%), Positives = 207/332 (62%), Gaps = 4/332 (1%)

Query: 1   MKSCNEWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWE 60
           +K  ++W P+I M+  +    +VN  +KK L+ G+N ++    R+ +++ +LAPI Y  E
Sbjct: 8   VKVESKWPPIIVMVISQVAMGSVNALVKKALDVGVNHMIIGAYRIAISSFILAPIAYILE 67

Query: 61  RNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPF 120
           R   P++T R++   F S ++G SL Q+F+LLG+ YTSAT ACA ++++P ITF  AL  
Sbjct: 68  REIIPEITFRLMVDHFISGLLGASLMQFFYLLGLSYTSATVACALVSLMPAITFAFALIL 127

Query: 121 GLETV-DIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRK 179
             E +  ++  +G  KV+GT++CI GA+ LT YKG P   +S+S  E   +  + +    
Sbjct: 128 RTEKIKSLRTQAGMIKVMGTIICISGALFLTFYKG-PHISNSHSHQEALPH--NNNSDHN 184

Query: 180 TERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRN 239
           T+ W  G + LT+GT+L + W   Q  +  +YPCK+SST ++S+F A Q A+L L  +R+
Sbjct: 185 TKNWLLGCLYLTIGTVLISLWILFQGTLSIKYPCKFSSTCLMSIFAAFQCALLSLYKSRD 244

Query: 240 HSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPL 299
              W    +  I  ++YAG++G  +  V +TW VKK G VF +A  P+  I A++FD  +
Sbjct: 245 VKDWIIDDRFVIGVIVYAGVIGQAMSTVSVTWGVKKLGAVFVSAIMPIALISASLFDFII 304

Query: 300 LHERLHIGSLLGSITVIIGLYILLWGKNKEMQ 331
           LH  L++GSL+GS+  I GLY+ LWGKNK+M+
Sbjct: 305 LHTPLYLGSLIGSVGTITGLYVFLWGKNKDME 336

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M129|WTR30_ARATH WAT1-related protein At4g01450 OS=Arabidopsis thaliana GN=At4g01450 PE=2 SV=1

 Score =  254 bits (650), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 144/328 (43%), Positives = 214/328 (65%), Gaps = 7/328 (2%)

Query: 6   EWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRP 65
           +W P+I +I        VN  +KKVL+ G+N +V  T RL ++T+ L P+ YFWER +RP
Sbjct: 7   KWAPMIVLIVSNMIAGMVNALVKKVLDGGINHMVIATYRLGISTLFLLPVAYFWERKTRP 66

Query: 66  KLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETV 125
           KLTL I   LF SA+ G SL QYF+LLG+ YTSAT   AF  ++P +TFV+AL FG E +
Sbjct: 67  KLTLSISCQLFVSALFGASLMQYFYLLGLSYTSATLGSAFWAIMPSLTFVMALIFGFEKL 126

Query: 126 DIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTF 185
            +K   G   V+GTL+ + G +LLT+Y+G+PL +     A +  +  H       E W  
Sbjct: 127 SLKTKIGYGVVLGTLISLVGGLLLTMYQGIPLTNSPEQAANSNNHTGH-------ENWIK 179

Query: 186 GTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSF 245
           G   L  G +L++SW  IQ+ I  +YPC YSST ILS+FG +Q A+L L   R+   W  
Sbjct: 180 GCFFLLTGVVLFSSWMLIQAKINVKYPCPYSSTVILSVFGTLQCALLSLIKTRHLEDWIL 239

Query: 246 KGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLH 305
           + ++ II+V+ AG+V  G+C VG++WC+K++GPV +++FSP+V + A +FD  +LH  ++
Sbjct: 240 RDELTIITVVIAGVVAQGMCTVGMSWCIKQQGPVVSSSFSPVVLMSATVFDFLILHREIY 299

Query: 306 IGSLLGSITVIIGLYILLWGKNKEMQNC 333
           +GS++GS+ V+IGLYI LW ++K++  C
Sbjct: 300 LGSVIGSVVVVIGLYIFLWSRSKQIVEC 327

Arabidopsis thaliana (taxid: 3702)

>sp|Q8GXB4|WTR2_ARATH WAT1-related protein At1g09380 OS=Arabidopsis thaliana GN=At1g09380 PE=2 SV=1

 Score =  249 bits (635), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 137/364 (37%), Positives = 211/364 (57%), Gaps = 29/364 (7%)

Query: 9   PLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLT 68
           P +AM+ V+ G+A +NI  K  +E GM  L+ +  R + ATI   P+ +F ER +RPK+T
Sbjct: 8   PFLAMVLVQIGYAGMNITSKMAMEAGMKPLILVAYRQIFATIATFPVAFFLERKTRPKIT 67

Query: 69  LRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIK 128
           LRIL  +FF +I G +  Q  + +G+Q +S T ACA  N++P +TF++A  F  ETV IK
Sbjct: 68  LRILVQVFFCSITGATGNQVLYFVGLQNSSPTIACALTNLLPAVTFLLAAIFRQETVGIK 127

Query: 129 GISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAI------NVMHMHPTRKTER 182
             SG+AKV+GTLVC+ GAM+L+ Y G     H+    E+ I      N+     +     
Sbjct: 128 KASGQAKVIGTLVCVIGAMVLSFYHG-----HTIGIGESKIHWAYAENITKHGSSSGHSN 182

Query: 183 WTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSA 242
           +  G   +    + WA+WF IQ+ + + +   Y+ST ++ L G+IQ   + L ++   S 
Sbjct: 183 FFLGPFLIMAAAVSWAAWFIIQTKMSETFAAPYTSTLLMCLMGSIQCGAIALISDHTISD 242

Query: 243 WSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHE 302
           WS    +  IS LYAG+V S L +  ++W +++KGP++ + FSPL+ ++ A+F   LL E
Sbjct: 243 WSLSSPLRFISALYAGVVASALAFCLMSWAMQRKGPLYVSVFSPLLLVVVAIFSWALLEE 302

Query: 303 RLHIGSLLGSITVIIGLYILLWGKN------------KEMQNCVSKVTQEA-EDIKEQEP 349
           +L+ G+ +GS  V+IGLY +LWGK+             + QN   KV  E+ EDI   E 
Sbjct: 303 KLYTGTFMGSALVVIGLYGVLWGKDREVSEKEEEREKVKQQN--HKVKSESNEDI---ES 357

Query: 350 QLPV 353
           +LPV
Sbjct: 358 RLPV 361

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LV20|WTR17_ARATH WAT1-related protein At3g18200 OS=Arabidopsis thaliana GN=At3g18200 PE=2 SV=1

 Score =  233 bits (593), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 125/341 (36%), Positives = 200/341 (58%), Gaps = 7/341 (2%)

Query: 8   KPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKL 67
           K ++A+I ++F FA  +I  +  L  G++++V+   R L+A +L+ P  YF+E+  RP L
Sbjct: 34  KLVVALITLQFCFAGFHIVSRVALNIGVSKVVYPVYRNLLALLLIGPFAYFFEKKERPPL 93

Query: 68  TLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDI 127
           T+ +L   FF A++G +  Q F+LLG+ Y + TFA A  N VP ITF++A    LE +D+
Sbjct: 94  TISLLAQFFFLALIGITANQGFYLLGLYYATPTFASAMQNSVPAITFIMACALRLEHIDL 153

Query: 128 KGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYS-QAETAINVMHMHPTRKTERWTFG 186
               G AKV+GTLV IGGA ++TLY+G P+FD   + Q E  +   + H        T G
Sbjct: 154 VRKHGVAKVLGTLVSIGGATVITLYRGFPIFDQGLNMQKEEVVGSDNSHSL------TLG 207

Query: 187 TIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFK 246
            + L    L WA W  +Q+ + K+YP K + T+    FG IQ  ++ L    + + W   
Sbjct: 208 WLYLMGHCLSWAGWMVLQAPVLKQYPAKLTLTSFTCFFGLIQFLVIALFVETDLNNWIIV 267

Query: 247 GKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHI 306
              E+ ++LYAGI+ SGL     TWC+ K GPVF A F PL  ++ A     +L ++L+ 
Sbjct: 268 SWEELFTILYAGIIASGLVVYLQTWCIYKSGPVFVAVFQPLQTLLVAAMAFLILGDQLYS 327

Query: 307 GSLLGSITVIIGLYILLWGKNKEMQNCVSKVTQEAEDIKEQ 347
           G ++G++ +++GLY++LWGKN+E +  + +  Q+ E + + 
Sbjct: 328 GGIVGAVFIMLGLYLVLWGKNEERKLALEESQQDPESLTKH 368

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FL41|WTR38_ARATH WAT1-related protein At5g07050 OS=Arabidopsis thaliana GN=At5g07050 PE=2 SV=1

 Score =  230 bits (587), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 129/360 (35%), Positives = 208/360 (57%), Gaps = 18/360 (5%)

Query: 1   MKSCNEW----KPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIG 56
           + SC  +    KP  AMI+++FG+A +NI  K  L  GM+  V +  R  +AT ++AP  
Sbjct: 6   ISSCESFLTSSKPYFAMISLQFGYAGMNIITKISLNTGMSHYVLVVYRHAIATAVIAPFA 65

Query: 57  YFWERNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVI 116
           +F+ER ++PK+T  I   LF   ++G  + Q F+ +G++YTS TF+CA  NM+P +TF++
Sbjct: 66  FFFERKAQPKITFSIFMQLFILGLLGPVIDQNFYYMGLKYTSPTFSCAMSNMLPAMTFIL 125

Query: 117 ALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKG--MPLFDHSYSQAETAINVMHM 174
           A+ F +E +D+K +  +AK+ GT+V + GAML+T+YKG  + LF   Y   + + +    
Sbjct: 126 AVLFRMEMLDLKKLWCQAKIAGTVVTVAGAMLMTIYKGPIVELFWTKYMHIQDSSHANTT 185

Query: 175 HPTRKTERWTF--GTIALTVGTLLWASWFPIQSYIGKRY-PCKYSSTAILSLFGAIQAAI 231
                +    F  G+I L   TL WAS F +Q+ I K Y   + S T ++   G +QA  
Sbjct: 186 SSKNSSSDKEFLKGSILLIFATLAWASLFVLQAKILKTYAKHQLSLTTLICFIGTLQAVA 245

Query: 232 LCLATNRNHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIM 291
           +      N SAW     + +++  Y+GIV S + Y      +KK+GPVF  AFSPL+ ++
Sbjct: 246 VTFVMEHNPSAWRIGWDMNLLAAAYSGIVASSISYYVQGIVMKKRGPVFATAFSPLMMVI 305

Query: 292 AAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKNKEMQ---------NCVSKVTQEAE 342
            A+    +L E++ +G ++G++ ++IGLY +LWGK KE Q         +  SKVT++ E
Sbjct: 306 VAVMGSFVLAEKIFLGGVIGAVLIVIGLYAVLWGKQKENQVTICELAKIDSNSKVTEDVE 365

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	363
255555839	369	Auxin-induced protein 5NG4, putative [Ri	0.997	0.981	0.686	1e-144
225426479	368	PREDICTED: auxin-induced protein 5NG4 [V	1.0	0.986	0.663	1e-140
297742491	748	unnamed protein product [Vitis vinifera]	1.0	0.485	0.663	1e-139
356555443	374	PREDICTED: auxin-induced protein 5NG4-li	0.944	0.917	0.679	1e-138
356525300	351	PREDICTED: auxin-induced protein 5NG4-li	0.958	0.991	0.675	1e-137
356546558	374	PREDICTED: auxin-induced protein 5NG4-li	0.944	0.917	0.673	1e-137
358248972	357	uncharacterized protein LOC100791663 [Gl	0.966	0.983	0.669	1e-136
388490838	363	unknown [Medicago truncatula]	0.977	0.977	0.647	1e-135
449515311	362	PREDICTED: auxin-induced protein 5NG4-li	0.953	0.955	0.642	1e-124
449456450	361	PREDICTED: auxin-induced protein 5NG4-li	0.953	0.958	0.642	1e-124

>gi|255555839|ref|XP_002518955.1| Auxin-induced protein 5NG4, putative [Ricinus communis] gi|223541942|gb|EEF43488.1| Auxin-induced protein 5NG4, putative [Ricinus communis]

 Score =  518 bits (1335), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 250/364 (68%), Positives = 298/364 (81%), Gaps = 2/364 (0%)

Query: 1   MKSCNEWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWE 60
           +KSCN+WKP I M+AV+F FA VNI LKKVL+EG+N LV IT RLL++   L PIGYF E
Sbjct: 5   IKSCNKWKPFIVMLAVDFAFAVVNILLKKVLDEGINHLVLITYRLLISAGFLGPIGYFCE 64

Query: 61  RNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPF 120
           RNSR KLT RI   LF SAI+G SLTQ+ FLLGIQYTSATFACAFIN+VPV+TF++ALPF
Sbjct: 65  RNSRTKLTFRITCYLFVSAIIGASLTQFVFLLGIQYTSATFACAFINIVPVVTFIVALPF 124

Query: 121 GLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHP--TR 178
           G+E V+IK  SG+AKVVGTLVC+GGAMLLTLY+GMPLF H  S++        ++P  T+
Sbjct: 125 GMENVNIKSNSGRAKVVGTLVCVGGAMLLTLYRGMPLFSHPQSRSIHQAIQHGINPNYTK 184

Query: 179 KTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNR 238
           + ERWT G +AL VG LLW+SWF +QS + KR+P +YSSTAI++ FGAIQ+A+LC +T R
Sbjct: 185 RAERWTIGCVALIVGVLLWSSWFILQSNVSKRFPYQYSSTAIMTFFGAIQSAVLCFSTER 244

Query: 239 NHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIP 298
           N S W  KGKIEI++VLYAG+VGSGLCYV ++WCVKK+GPVFT+AFSPLVQIMAAM DIP
Sbjct: 245 NLSIWILKGKIEILTVLYAGMVGSGLCYVAMSWCVKKRGPVFTSAFSPLVQIMAAMIDIP 304

Query: 299 LLHERLHIGSLLGSITVIIGLYILLWGKNKEMQNCVSKVTQEAEDIKEQEPQLPVITVSA 358
           +LHE LH+GSLLGSI VIIGLYILLWGKN+EMQN  +KV QEAE+IKEQEPQ  VITV  
Sbjct: 305 ILHEELHLGSLLGSIIVIIGLYILLWGKNREMQNHATKVAQEAEEIKEQEPQSQVITVPC 364

Query: 359 AADC 362
            A C
Sbjct: 365 DARC 368

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225426479|ref|XP_002270961.1| PREDICTED: auxin-induced protein 5NG4 [Vitis vinifera]

 Score =  504 bits (1299), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 242/365 (66%), Positives = 295/365 (80%), Gaps = 2/365 (0%)

Query: 1   MKSCNEWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWE 60
           +KS + W P+I M+AV+F FA VNI LK+VL   MN LV IT R  ++TI L PIGYFWE
Sbjct: 4   LKSFDTWSPVIVMLAVDFAFAVVNILLKEVLNAEMNHLVLITYRQSISTIFLVPIGYFWE 63

Query: 61  RNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPF 120
           RNSRPKLTLRIL  LFFSA+VG SLTQYFFLLGIQYTSATFACAFINMVP ITF+++LPF
Sbjct: 64  RNSRPKLTLRILCYLFFSALVGASLTQYFFLLGIQYTSATFACAFINMVPAITFIMSLPF 123

Query: 121 GLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAE--TAINVMHMHPTR 178
           GLE V+IK   G+AK++GTLVCI GAM+LTLYKGMPL  +S  +A   T    + +   +
Sbjct: 124 GLEIVNIKTNRGRAKLIGTLVCICGAMILTLYKGMPLVKYSRPEAPSPTMDQAISLSSGK 183

Query: 179 KTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNR 238
           KTERWT G+IAL  GTLLW+SWF IQS IGK YPC+YSSTAI+S FGAIQ+A++ L+ +R
Sbjct: 184 KTERWTVGSIALMGGTLLWSSWFLIQSNIGKLYPCQYSSTAIMSFFGAIQSAVISLSMDR 243

Query: 239 NHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIP 298
           N S W  KGK EI++V+YAG+VGSGLCYV ++WCVKK+GPVFTAAFSPLVQIMA MFDIP
Sbjct: 244 NLSLWILKGKTEILTVIYAGVVGSGLCYVAMSWCVKKRGPVFTAAFSPLVQIMAVMFDIP 303

Query: 299 LLHERLHIGSLLGSITVIIGLYILLWGKNKEMQNCVSKVTQEAEDIKEQEPQLPVITVSA 358
           +LHE+LH+GS+LGS TVI GLYILLWGK K+ +N   ++ QEAE++K+QE QL V T+++
Sbjct: 304 ILHEQLHLGSVLGSATVIAGLYILLWGKKKDAENSSMELVQEAEEVKDQEAQLQVTTITS 363

Query: 359 AADCP 363
            + CP
Sbjct: 364 GSRCP 368

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297742491|emb|CBI34640.3| unnamed protein product [Vitis vinifera]

 Score =  501 bits (1291), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 242/365 (66%), Positives = 295/365 (80%), Gaps = 2/365 (0%)

Query: 1   MKSCNEWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWE 60
           +KS + W P+I M+AV+F FA VNI LK+VL   MN LV IT R  ++TI L PIGYFWE
Sbjct: 384 LKSFDTWSPVIVMLAVDFAFAVVNILLKEVLNAEMNHLVLITYRQSISTIFLVPIGYFWE 443

Query: 61  RNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPF 120
           RNSRPKLTLRIL  LFFSA+VG SLTQYFFLLGIQYTSATFACAFINMVP ITF+++LPF
Sbjct: 444 RNSRPKLTLRILCYLFFSALVGASLTQYFFLLGIQYTSATFACAFINMVPAITFIMSLPF 503

Query: 121 GLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAE--TAINVMHMHPTR 178
           GLE V+IK   G+AK++GTLVCI GAM+LTLYKGMPL  +S  +A   T    + +   +
Sbjct: 504 GLEIVNIKTNRGRAKLIGTLVCICGAMILTLYKGMPLVKYSRPEAPSPTMDQAISLSSGK 563

Query: 179 KTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNR 238
           KTERWT G+IAL  GTLLW+SWF IQS IGK YPC+YSSTAI+S FGAIQ+A++ L+ +R
Sbjct: 564 KTERWTVGSIALMGGTLLWSSWFLIQSNIGKLYPCQYSSTAIMSFFGAIQSAVISLSMDR 623

Query: 239 NHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIP 298
           N S W  KGK EI++V+YAG+VGSGLCYV ++WCVKK+GPVFTAAFSPLVQIMA MFDIP
Sbjct: 624 NLSLWILKGKTEILTVIYAGVVGSGLCYVAMSWCVKKRGPVFTAAFSPLVQIMAVMFDIP 683

Query: 299 LLHERLHIGSLLGSITVIIGLYILLWGKNKEMQNCVSKVTQEAEDIKEQEPQLPVITVSA 358
           +LHE+LH+GS+LGS TVI GLYILLWGK K+ +N   ++ QEAE++K+QE QL V T+++
Sbjct: 684 ILHEQLHLGSVLGSATVIAGLYILLWGKKKDAENSSMELVQEAEEVKDQEAQLQVTTITS 743

Query: 359 AADCP 363
            + CP
Sbjct: 744 GSRCP 748

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356555443|ref|XP_003546041.1| PREDICTED: auxin-induced protein 5NG4-like [Glycine max]

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 235/346 (67%), Positives = 292/346 (84%), Gaps = 3/346 (0%)

Query: 3   SCNEWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERN 62
           +C+EWKP I MIA++F FA VNI LKKVLEEGMN LVFIT RL +ATI +APIGYF ERN
Sbjct: 4   TCDEWKPFIVMIAIDFSFAAVNILLKKVLEEGMNHLVFITYRLSIATIFIAPIGYFRERN 63

Query: 63  SRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGL 122
            RP+LT RIL  LF SAIVG S+TQYFFLLGIQYTSATF+CAFINMVPV+TF++ALPFGL
Sbjct: 64  DRPRLTFRILCYLFCSAIVGASVTQYFFLLGIQYTSATFSCAFINMVPVVTFMMALPFGL 123

Query: 123 ETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAI---NVMHMHPTRK 179
           ETV IK  SG+AK++G+LVCIGGA++LTLYKG PLF+ S+ ++ + +   + +++  TR 
Sbjct: 124 ETVKIKSKSGRAKILGSLVCIGGALMLTLYKGKPLFNFSHYESVSPVAKSSEVNLASTRT 183

Query: 180 TERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRN 239
           T +WT G IAL +GT+ W+SWF +QS I KRYPC+YSSTAI+S FGAIQ+A++C  T+ N
Sbjct: 184 TGKWTIGVIALALGTIFWSSWFILQSKISKRYPCQYSSTAIMSFFGAIQSAVICFFTDHN 243

Query: 240 HSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPL 299
            S W  +GKI+II++LYAG++GSGLC+VG++WCVKK+GPVFTAAFSPLVQIMAAM DIP+
Sbjct: 244 LSIWVLQGKIQIIAILYAGMIGSGLCFVGMSWCVKKRGPVFTAAFSPLVQIMAAMIDIPV 303

Query: 300 LHERLHIGSLLGSITVIIGLYILLWGKNKEMQNCVSKVTQEAEDIK 345
           LHE+LH+GS++GSI VIIGLYILLWGK+ EMQN V K+ QEAE+ K
Sbjct: 304 LHEQLHLGSVMGSILVIIGLYILLWGKSMEMQNRVVKLVQEAEETK 349

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356525300|ref|XP_003531263.1| PREDICTED: auxin-induced protein 5NG4-like [Glycine max]

 Score =  494 bits (1271), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 239/354 (67%), Positives = 289/354 (81%), Gaps = 6/354 (1%)

Query: 1   MKSCNEWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWE 60
           MK+C+EWKP + MIA++F    VNI LKKVL+EGMN LVFIT RL VATI LAPIGYF E
Sbjct: 1   MKNCDEWKPFLVMIAIDFSLTMVNILLKKVLQEGMNHLVFITYRLSVATIFLAPIGYFKE 60

Query: 61  RNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPF 120
           RN RP+LT +IL CLFFSAI+G S+TQYFFLLGIQYTSATFACAF+NMVPVITF++ALPF
Sbjct: 61  RNGRPQLTFQILCCLFFSAIIGASVTQYFFLLGIQYTSATFACAFVNMVPVITFIMALPF 120

Query: 121 GLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKT 180
           GLETV+IK   GKAK++GT VCIGGA+LLTLYKG PLFD S+ Q+           TR T
Sbjct: 121 GLETVNIKCKGGKAKILGTFVCIGGALLLTLYKGKPLFDGSHYQSAMD---QASSTTRST 177

Query: 181 ERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLAT-NRN 239
           ++WT G IAL +GTL W+ WF +QS IGKRYPC+YSSTAI++ FGA+QAAIL  +T + N
Sbjct: 178 QKWTIGVIALIMGTLFWSFWFILQSKIGKRYPCQYSSTAIMTFFGAMQAAILGFSTGSSN 237

Query: 240 HSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPL 299
            S+W  K KI+II+VLY+GIVGS +CYVG++WCVKK+GPVFTAAFSPLVQIM+ M DIP 
Sbjct: 238 LSSWVLKDKIQIITVLYSGIVGSSVCYVGMSWCVKKRGPVFTAAFSPLVQIMSGMIDIPF 297

Query: 300 LHERLHIGSLLGSITVIIGLYILLWGKNKEM--QNCVSKVTQEAEDIKEQEPQL 351
           LHE+LH+GS++GS+ V+IGLYILLWGK+K+M   N  +K  QE E+ KEQEPQ+
Sbjct: 298 LHEQLHLGSVVGSMLVMIGLYILLWGKSKDMMQNNGATKFAQEVEETKEQEPQV 351

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356546558|ref|XP_003541692.1| PREDICTED: auxin-induced protein 5NG4-like [Glycine max]

 Score =  493 bits (1268), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 233/346 (67%), Positives = 290/346 (83%), Gaps = 3/346 (0%)

Query: 3   SCNEWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERN 62
           +C+EWKP I MIA++F FA VNI LKKVLEEGMN LVFIT RL +ATI +API YF ERN
Sbjct: 4   TCDEWKPFIVMIAIDFSFAAVNILLKKVLEEGMNHLVFITYRLSIATIFIAPICYFRERN 63

Query: 63  SRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGL 122
            RP+LT RIL  LF SAIVG S+TQYFFL+GIQYTSATF+CAFINMVPV+TF++ALPFGL
Sbjct: 64  DRPRLTFRILCYLFCSAIVGASVTQYFFLMGIQYTSATFSCAFINMVPVVTFMMALPFGL 123

Query: 123 ETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAI---NVMHMHPTRK 179
           ETV IK  SG+AK++G+LVCIGGA++LTLYKG PLF+ S+ ++ + +   + +++  TR 
Sbjct: 124 ETVKIKCKSGRAKILGSLVCIGGALMLTLYKGKPLFNFSHYESVSPVANSSAVNLASTRT 183

Query: 180 TERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRN 239
             +WT G IAL +GT+ W+SWF +QS I KRYPC+YSSTAI+S FGAIQ+A++C  T+ N
Sbjct: 184 KGKWTIGVIALVLGTIFWSSWFILQSKISKRYPCQYSSTAIMSFFGAIQSAVICFFTDHN 243

Query: 240 HSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPL 299
            S W  KGKI+II++LYAG++GSGLC+VG++WCVKK+GPVFTAAFSPLVQIMAAM DIP+
Sbjct: 244 LSIWVLKGKIQIIAILYAGMIGSGLCFVGMSWCVKKRGPVFTAAFSPLVQIMAAMIDIPV 303

Query: 300 LHERLHIGSLLGSITVIIGLYILLWGKNKEMQNCVSKVTQEAEDIK 345
           LHE+LH+GS++GSI VIIGLYILLWGK+ EMQN V K+ QEAE+ K
Sbjct: 304 LHEQLHLGSVMGSILVIIGLYILLWGKSMEMQNRVVKLVQEAEETK 349

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358248972|ref|NP_001240227.1| uncharacterized protein LOC100791663 [Glycine max] gi|255635141|gb|ACU17927.1| unknown [Glycine max]

 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 239/357 (66%), Positives = 290/357 (81%), Gaps = 6/357 (1%)

Query: 1   MKSCNEWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWE 60
           MK+C+EWKP + MIA++F    VNI LKKVL+EGMN LVFIT RL VATI LAPIGYF E
Sbjct: 1   MKNCDEWKPFLVMIAIDFSLTMVNILLKKVLQEGMNHLVFITYRLSVATIFLAPIGYFKE 60

Query: 61  RNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPF 120
           RN RP+LTL+IL  LFFSAI+G S+TQYFFLLGIQYTSATFACAF+NMVPVITF++ALPF
Sbjct: 61  RNGRPRLTLQILCYLFFSAIIGASVTQYFFLLGIQYTSATFACAFVNMVPVITFIMALPF 120

Query: 121 GLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHP---T 177
           GLETV+IK   GKAK++GT VCIGGA+LLTLYKG  LFD S+ Q+  A+          T
Sbjct: 121 GLETVNIKCKGGKAKILGTFVCIGGALLLTLYKGKALFDGSHHQSAVAMRSAMDQASSTT 180

Query: 178 RKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLAT- 236
           R T++WT G IAL +GTL W+ WF +QS IGKRYPC+YSSTAI++ FGA+QAAIL  +T 
Sbjct: 181 RTTQKWTIGVIALIMGTLFWSFWFILQSKIGKRYPCQYSSTAIMTFFGAMQAAILGFSTG 240

Query: 237 NRNHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFD 296
           + N S+W  K KI+II+VLY+GIVGS +CYVG++WCVKK+GPVFTAAFSPLVQIM+ M D
Sbjct: 241 SSNLSSWVLKDKIQIITVLYSGIVGSSVCYVGMSWCVKKRGPVFTAAFSPLVQIMSGMID 300

Query: 297 IPLLHERLHIGSLLGSITVIIGLYILLWGKNKEM--QNCVSKVTQEAEDIKEQEPQL 351
           IP LHE+LH+GS++GS+ V+IGLYILLWGK+K+M   N  +K  QE E+ KEQEPQ+
Sbjct: 301 IPFLHEQLHLGSVVGSMLVMIGLYILLWGKSKDMMQNNGATKFAQEVEETKEQEPQV 357

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388490838|gb|AFK33485.1| unknown [Medicago truncatula]

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 233/360 (64%), Positives = 294/360 (81%), Gaps = 5/360 (1%)

Query: 1   MKSCNEWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWE 60
           MKSC EWKP + MIA++  FA VNI LKKVL+EGMN LVFIT RL +ATI +  IGYF E
Sbjct: 1   MKSCEEWKPFMIMIAIDISFAVVNILLKKVLDEGMNHLVFITYRLSIATIFVGSIGYFRE 60

Query: 61  RNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPF 120
           RNSRP LT RIL  LFFSA+VG S+TQYFFLLGIQYTSATFACAF+NMVPV+TF++ALPF
Sbjct: 61  RNSRPPLTFRILCYLFFSAVVGASVTQYFFLLGIQYTSATFACAFVNMVPVVTFLLALPF 120

Query: 121 GLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKT 180
           G+ETV+IK  SG+AK+ GTLVCI GA++LTLYKG  LF+ S+ ++      + +  TR  
Sbjct: 121 GIETVNIKCNSGRAKIFGTLVCIVGALMLTLYKGKGLFNFSHHESS-----VKLAATRTP 175

Query: 181 ERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNH 240
           E+WT G IAL +GTL W+SWF +QS I KRYPC+YSSTAI+S FGAIQ+A++CL  + + 
Sbjct: 176 EKWTIGVIALILGTLFWSSWFILQSKISKRYPCQYSSTAIMSFFGAIQSAVICLFIDHDL 235

Query: 241 SAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLL 300
           S W  +GKI+II++LYAGI GSGLC+VG++WCVKK+GPVFTAAFSP VQIMAA+ DIP+L
Sbjct: 236 SIWVLRGKIQIIAILYAGITGSGLCFVGMSWCVKKRGPVFTAAFSPFVQIMAALIDIPVL 295

Query: 301 HERLHIGSLLGSITVIIGLYILLWGKNKEMQNCVSKVTQEAEDIKEQEPQLPVITVSAAA 360
           HE+L++GS+LGSI V++GLYILLWGK+KEM+N +  + ++AE+ KEQEPQ+  +TVS  +
Sbjct: 296 HEQLYLGSVLGSILVMLGLYILLWGKSKEMKNRLIMLAEKAEETKEQEPQIQHLTVSCES 355

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449515311|ref|XP_004164693.1| PREDICTED: auxin-induced protein 5NG4-like [Cucumis sativus]

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 225/350 (64%), Positives = 273/350 (78%), Gaps = 4/350 (1%)

Query: 1   MKSCNEWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWE 60
           MK   ++KPL+AM+A++F FA VNI L+ VL+ GMN LV IT RL +A I LAPI YF E
Sbjct: 6   MKGLEDFKPLMAMVAIDFAFAIVNILLETVLDHGMNHLVLITYRLSIAAISLAPIAYFCE 65

Query: 61  RNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPF 120
           ++ R  L+LRIL  LFFSAIVG SLTQY FLLGIQ+TSATFACAF+N+VPV+TF++ALPF
Sbjct: 66  KDGRANLSLRILCYLFFSAIVGASLTQYCFLLGIQHTSATFACAFVNIVPVVTFLLALPF 125

Query: 121 GLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKT 180
           GLE+V +K  SGKAKV+GT+VCI GA+LLT YKG  L + SY  A    +V      +  
Sbjct: 126 GLESVKLKSSSGKAKVIGTVVCISGAVLLTTYKGPTLANASYVTA----HVSDAKLKKTA 181

Query: 181 ERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNH 240
           E WT G IAL  GTLLW+SWF +QS IGKRYP +YSSTAI+S FGAIQ+A+L L+T    
Sbjct: 182 ESWTVGCIALVAGTLLWSSWFLLQSNIGKRYPYQYSSTAIMSGFGAIQSAVLSLSTGAKL 241

Query: 241 SAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLL 300
           SAW+  GKI+I++VLY G++GSG+C+VG++WCVKK+GPVFTAAFSPLVQIMAAMFDIP+L
Sbjct: 242 SAWALTGKIQILTVLYTGMIGSGICFVGMSWCVKKRGPVFTAAFSPLVQIMAAMFDIPIL 301

Query: 301 HERLHIGSLLGSITVIIGLYILLWGKNKEMQNCVSKVTQEAEDIKEQEPQ 350
           HE L +GSLLGSI VIIGLYILLWGKNKEM++C SKV  E E      P 
Sbjct: 302 HEPLFLGSLLGSIIVIIGLYILLWGKNKEMESCASKVVVEEEITSTITPH 351

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449456450|ref|XP_004145962.1| PREDICTED: auxin-induced protein 5NG4-like [Cucumis sativus]

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 225/350 (64%), Positives = 273/350 (78%), Gaps = 4/350 (1%)

Query: 1   MKSCNEWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWE 60
           MK   ++KPL+AM+A++F FA VNI L+ VL+ GMN LV IT RL +A I LAPI YF E
Sbjct: 6   MKGLEDFKPLMAMVAIDFAFAIVNILLETVLDHGMNHLVLITYRLSIAAISLAPIAYFCE 65

Query: 61  RNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPF 120
           ++ R  L+LRIL  LFFSAIVG SLTQY FLLGIQ+TSATFACAF+N+VPV+TF++ALPF
Sbjct: 66  KDGRANLSLRILCYLFFSAIVGASLTQYCFLLGIQHTSATFACAFVNIVPVVTFLLALPF 125

Query: 121 GLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKT 180
           GLE+V +K  SGKAKV+GT+VCI GA+LLT YKG  L + SY  A    +V      +  
Sbjct: 126 GLESVKLKSSSGKAKVIGTVVCISGAVLLTTYKGPTLANASYVTA----HVSDAKLKKTA 181

Query: 181 ERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNH 240
           E WT G IAL  GTLLW+SWF +QS IGKRYP +YSSTAI+S FGAIQ+A+L L+T    
Sbjct: 182 ESWTVGCIALVAGTLLWSSWFLLQSNIGKRYPYQYSSTAIMSGFGAIQSAVLSLSTGAKL 241

Query: 241 SAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLL 300
           SAW+  GKI+I++VLY G++GSG+C+VG++WCVKK+GPVFTAAFSPLVQIMAAMFDIP+L
Sbjct: 242 SAWALTGKIQILTVLYTGMIGSGICFVGMSWCVKKRGPVFTAAFSPLVQIMAAMFDIPIL 301

Query: 301 HERLHIGSLLGSITVIIGLYILLWGKNKEMQNCVSKVTQEAEDIKEQEPQ 350
           HE L +GSLLGSI VIIGLYILLWGKNKEM++C SKV  E E      P 
Sbjct: 302 HEPLFLGSLLGSIIVIIGLYILLWGKNKEMESCASKVVVEEEITSTITPH 351

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	363
TAIR|locus:2102881	364	UMAMIT32 "Usually multiple aci	0.917	0.914	0.489	3.1e-90
TAIR|locus:2125172	365	UMAMIT31 "Usually multiple aci	0.950	0.945	0.467	8.9e-86
TAIR|locus:2116967	361	UMAMIT30 "Usually multiple aci	0.925	0.930	0.443	2.1e-77
TAIR|locus:2200990	365	UMAMIT28 "Usually multiple aci	0.892	0.887	0.416	2.1e-70
TAIR|locus:2125167	365	UMAMIT29 "Usually multiple aci	0.933	0.928	0.411	2.1e-70
TAIR|locus:2200041	337	UMAMIT26 "Usually multiple aci	0.892	0.961	0.396	1e-68
TAIR|locus:2200056	352	UMAMIT27 "Usually multiple aci	0.900	0.928	0.394	1.3e-68
TAIR|locus:2012255	374	UMAMIT25 "Usually multiple aci	0.922	0.895	0.385	2e-65
TAIR|locus:2092702	383	UMAMIT4 "AT3G18200" [Arabidops	0.911	0.864	0.369	1.9e-60
TAIR|locus:2169414	402	UMAMIT9 "Usually multiple acid	0.939	0.848	0.361	1e-59

TAIR|locus:2102881 UMAMIT32 "Usually multiple acids move in and out Transporters 32" [Arabidopsis thaliana (taxid:3702)]

 Score = 900 (321.9 bits), Expect = 3.1e-90, P = 3.1e-90
 Identities = 166/339 (48%), Positives = 245/339 (72%)

Query:     7 WKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPK 66
             WK ++ M  +  G + VN+  KK+++EG+N +V  T RL V T+ L P   F ER++RPK
Sbjct:     9 WKAVLMMSMINIGLSVVNVMFKKMIDEGLNRMVATTYRLAVGTLFLIPFAIFLERHNRPK 68

Query:    67 LTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVD 126
             LT RIL  LFFSA++GTSL QYFFL+G++YTS+TF+ AF NMVP +TF +AL F  ET++
Sbjct:    69 LTGRILCSLFFSALLGTSLVQYFFLIGLEYTSSTFSLAFSNMVPSVTFALALVFRQETLN 128

Query:   127 IKGISGKAKVVGTLVCIGGAMLLTLYKGMPLF-DHSYSQAETAINVMHMHPTRKTERWTF 185
             IK   G+AK++GT++CI GA++LTLYKG  L  +HS +  ET  +         T++W  
Sbjct:   129 IKSNVGRAKLLGTMICICGALVLTLYKGTALSREHS-THMET--HTRTDSTGAMTQKWAM 185

Query:   186 GTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSF 245
             G+I L +  ++W+SWF +Q+ I + YPC+Y+ST ILS FG IQ+A+L L + R+ S W  
Sbjct:   186 GSIMLVISIIIWSSWFIVQAKISRVYPCQYTSTTILSFFGVIQSALLSLISERSTSMWVV 245

Query:   246 KGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLH 305
             K K +++++LY+GIVGSGLCYVG++WC++++G VFT++F PL+Q+ AA+F    LHE+++
Sbjct:   246 KDKFQVLALLYSGIVGSGLCYVGMSWCLRQRGAVFTSSFIPLIQVFAAIFSFSFLHEQIY 305

Query:   306 IGSLLGSITVIIGLYILLWGKNKEMQNCVSKVTQEAEDI 344
              GS++GS+ +I+GLYILLWGK+K+    V+K  QE  D+
Sbjct:   306 CGSVIGSMVIIVGLYILLWGKSKDKSASVTK--QEPLDL 342

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2125172 UMAMIT31 "Usually multiple acids move in and out Transporters 31" [Arabidopsis thaliana (taxid:3702)]

 Score = 858 (307.1 bits), Expect = 8.9e-86, P = 8.9e-86
 Identities = 164/351 (46%), Positives = 235/351 (66%)

Query:     1 MKSCN-EWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFW 59
             M  C+ +W P+I M+ +       N  +KKVL+ G+N +V  T RL ++T+ LAPI +FW
Sbjct:     1 MGYCDGKWTPVIIMVMINSALGLANALVKKVLDGGVNHMVIATYRLAISTLFLAPIAFFW 60

Query:    60 ERNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALP 119
             ER +RP LTL IL  LFFSA+VG SLTQYFFLLG+ YTSAT ACAFI+M P ITFV+AL 
Sbjct:    61 ERKTRPTLTLNILVQLFFSALVGASLTQYFFLLGLSYTSATLACAFISMTPAITFVMALI 120

Query:   120 FGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRK 179
             F +E +++K  +G   V+G L+CIGGA+LLT+YKG+PL      +    IN  H     K
Sbjct:   121 FRVEKLNMKSKAGMGMVMGALICIGGALLLTMYKGVPLTKLRKLETHQLINNNH---AMK 177

Query:   180 TERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRN 239
              E W  G + L  G+  + SW  IQ+ + ++YPC+YSST +LS FG IQ A+L L  +R+
Sbjct:   178 PENWIIGCVLLFAGSSCFGSWMLIQAKVNEKYPCQYSSTVVLSFFGTIQCALLSLIKSRD 237

Query:   240 HSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPL 299
              +AW    K++I++++YAG V  G+C VG +WC++K+GP+FT+ F+P+  I A +FD  +
Sbjct:   238 ITAWILTDKLDIVTIVYAGAVAQGICTVGTSWCIRKRGPIFTSIFTPVGLIFATLFDFLI 297

Query:   300 LHERLHIGSLLGSITVIIGLYILLWGKNKEM-QNCVSKVT-QEAEDIKEQE 348
             LH ++ +GS++GS  VI GLYI L GK + M + C  K+  +  ED +E++
Sbjct:   298 LHRQIFLGSVVGSGVVIFGLYIFLLGKVRLMKEECEKKLPCRFNEDDQEED 348

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2116967 UMAMIT30 "Usually multiple acids move in and out Transporters 30" [Arabidopsis thaliana (taxid:3702)]

 Score = 779 (279.3 bits), Expect = 2.1e-77, P = 2.1e-77
 Identities = 153/345 (44%), Positives = 226/345 (65%)

Query:     6 EWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRP 65
             +W P+I +I        VN  +KKVL+ G+N +V  T RL ++T+ L P+ YFWER +RP
Sbjct:     7 KWAPMIVLIVSNMIAGMVNALVKKVLDGGINHMVIATYRLGISTLFLLPVAYFWERKTRP 66

Query:    66 KLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETV 125
             KLTL I   LF SA+ G SL QYF+LLG+ YTSAT   AF  ++P +TFV+AL FG E +
Sbjct:    67 KLTLSISCQLFVSALFGASLMQYFYLLGLSYTSATLGSAFWAIMPSLTFVMALIFGFEKL 126

Query:   126 DIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTF 185
              +K   G   V+GTL+ + G +LLT+Y+G+PL  +S  QA  + N    H     E W  
Sbjct:   127 SLKTKIGYGVVLGTLISLVGGLLLTMYQGIPL-TNSPEQAANSNN----HTGH--ENWIK 179

Query:   186 GTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSF 245
             G   L  G +L++SW  IQ+ I  +YPC YSST ILS+FG +Q A+L L   R+   W  
Sbjct:   180 GCFFLLTGVVLFSSWMLIQAKINVKYPCPYSSTVILSVFGTLQCALLSLIKTRHLEDWIL 239

Query:   246 KGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLH 305
             + ++ II+V+ AG+V  G+C VG++WC+K++GPV +++FSP+V + A +FD  +LH  ++
Sbjct:   240 RDELTIITVVIAGVVAQGMCTVGMSWCIKQQGPVVSSSFSPVVLMSATVFDFLILHREIY 299

Query:   306 IGSLLGSITVIIGLYILLWGKNKEMQNC-VSKV-TQEAEDIKEQE 348
             +GS++GS+ V+IGLYI LW ++K++  C + K+ T   E+ KE+E
Sbjct:   300 LGSVIGSVVVVIGLYIFLWSRSKQIVECKIMKLPTNTVEEEKEEE 344

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2200990 UMAMIT28 "Usually multiple acids move in and out Transporters 28" [Arabidopsis thaliana (taxid:3702)]

 Score = 713 (256.0 bits), Expect = 2.1e-70, P = 2.1e-70
 Identities = 137/329 (41%), Positives = 204/329 (62%)

Query:     6 EWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRP 65
             ++ P+I M+       +VN  +KK L+ G+N +V    R+ ++ ++L P  Y  ER +RP
Sbjct:    13 KYSPVIVMVMSNVAMGSVNALVKKALDVGVNHMVIGAYRMAISALILVPFAYVLERKTRP 72

Query:    66 KLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETV 125
             ++T R++   F S ++G SL Q+FFLLG+ YTSAT +CA ++M+P ITF +AL F  E V
Sbjct:    73 QITFRLMVDHFVSGLLGASLMQFFFLLGLSYTSATVSCALVSMLPAITFALALIFRTENV 132

Query:   126 DI-KGISGKAKVVGTLVCIGGAMLLTLYKGMPLFD-HSYSQAETAINVMHMHPTRKTERW 183
              I K  +G  KV+GTL+CI GA+ LT YKG  + + HS+S    + N    +   K   W
Sbjct:   133 KILKTKAGMLKVIGTLICISGALFLTFYKGPQISNSHSHSHGGASHN---NNDQDKANNW 189

Query:   184 TFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAW 243
               G + LT+GT+L + W   Q  +  +YPCKYSST ++S+F A Q A+L L  +R+ + W
Sbjct:   190 LLGCLYLTIGTVLLSLWMLFQGTLSIKYPCKYSSTCLMSIFAAFQCALLSLYKSRDVNDW 249

Query:   244 SFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHER 303
                 +  I  ++YAG+VG  +  V  TW +KK G VF +AF PL  I A +FD  +LH  
Sbjct:   250 IIDDRFVITVIIYAGVVGQAMTTVATTWGIKKLGAVFASAFFPLTLISATLFDFLILHTP 309

Query:   304 LHIGSLLGSITVIIGLYILLWGKNKEMQN 332
             L++GS++GS+  I GLY+ LWGKNKE ++
Sbjct:   310 LYLGSVIGSLVTITGLYMFLWGKNKETES 338

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2125167 UMAMIT29 "Usually multiple acids move in and out Transporters 29" [Arabidopsis thaliana (taxid:3702)]

 Score = 713 (256.0 bits), Expect = 2.1e-70, P = 2.1e-70
 Identities = 142/345 (41%), Positives = 210/345 (60%)

Query:     1 MKSCNEWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWE 60
             MK   +W P+I M+       +VN  +KK L+ G+N ++F   R+ ++ ++L P  Y WE
Sbjct:     2 MKE-EQWAPVIVMLISSVAMGSVNALVKKALDVGVNHMIFGAYRMAISALILVPFSYIWE 60

Query:    61 RNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPF 120
             R +RP+LT  +L   F S ++G SL Q+FFLLG+ YTSAT + A ++M+P ITF +AL F
Sbjct:    61 RKTRPQLTFMLLCEHFISGLLGASLMQFFFLLGLSYTSATVSMALVSMLPAITFALALIF 120

Query:   121 GLETV-DIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFD-HSYSQAETAINVMHMHPTR 178
              +E   ++K  +G  KV+GTL+CI GAMLLT YKG  L + HS+ QA    N  + H   
Sbjct:   121 RIENAQNLKSKAGVLKVMGTLICIMGAMLLTFYKGPELSNPHSHPQARHNNNNNNGHD-- 178

Query:   179 KTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPC-KYSSTAILSLFGAIQAAILCLATN 237
             +T++W  G + L +GT+L + W   Q  +  +YP  KYSST ++S+F + Q AIL L  +
Sbjct:   179 QTKKWLLGCLYLVIGTVLLSLWMLFQGKLSFKYPGNKYSSTCLMSVFASFQCAILSLYKS 238

Query:   238 RNHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDI 297
             R+   W  + K  I+  LYAGIVG  +  V  +W +K  G VF + FSP+  + A +FD 
Sbjct:   239 RDVKDWIIEDKFVILVTLYAGIVGQAMSTVVTSWSIKMTGAVFVSTFSPVSLVAATLFDF 298

Query:   298 PLLHERLHIGSLLGSITVIIGLYILLWGKNKEMQNCVSKVTQEAE 342
              +LH  L++GS+LGS+  I GLY+ LWG+  E    VSK    ++
Sbjct:   299 LILHSPLYLGSILGSVVTITGLYVFLWGRKNETDQSVSKTLNSSQ 343

GO:0016020 "membrane" evidence=IEA

GO:0009830 "cell wall modification involved in abscission" evidence=RCA

TAIR|locus:2200041 UMAMIT26 "Usually multiple acids move in and out Transporters 26" [Arabidopsis thaliana (taxid:3702)]

 Score = 697 (250.4 bits), Expect = 1.0e-68, P = 1.0e-68
 Identities = 130/328 (39%), Positives = 205/328 (62%)

Query:     5 NEWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSR 64
             ++W P+I M+  +    +VN  +KK L+ G+N ++    R+ +++ +LAPI Y  ER   
Sbjct:    12 SKWPPIIVMVISQVAMGSVNALVKKALDVGVNHMIIGAYRIAISSFILAPIAYILEREII 71

Query:    65 PKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLET 124
             P++T R++   F S ++G SL Q+F+LLG+ YTSAT ACA ++++P ITF  AL    E 
Sbjct:    72 PEITFRLMVDHFISGLLGASLMQFFYLLGLSYTSATVACALVSLMPAITFAFALILRTEK 131

Query:   125 V-DIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERW 183
             +  ++  +G  KV+GT++CI GA+ LT YKG P   +S+S  E   +  + +    T+ W
Sbjct:   132 IKSLRTQAGMIKVMGTIICISGALFLTFYKG-PHISNSHSHQEALPH--NNNSDHNTKNW 188

Query:   184 TFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAW 243
               G + LT+GT+L + W   Q  +  +YPCK+SST ++S+F A Q A+L L  +R+   W
Sbjct:   189 LLGCLYLTIGTVLISLWILFQGTLSIKYPCKFSSTCLMSIFAAFQCALLSLYKSRDVKDW 248

Query:   244 SFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHER 303
                 +  I  ++YAG++G  +  V +TW VKK G VF +A  P+  I A++FD  +LH  
Sbjct:   249 IIDDRFVIGVIVYAGVIGQAMSTVSVTWGVKKLGAVFVSAIMPIALISASLFDFIILHTP 308

Query:   304 LHIGSLLGSITVIIGLYILLWGKNKEMQ 331
             L++GSL+GS+  I GLY+ LWGKNK+M+
Sbjct:   309 LYLGSLIGSVGTITGLYVFLWGKNKDME 336

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2200056 UMAMIT27 "Usually multiple acids move in and out Transporters 27" [Arabidopsis thaliana (taxid:3702)]

 Score = 696 (250.1 bits), Expect = 1.3e-68, P = 1.3e-68
 Identities = 131/332 (39%), Positives = 202/332 (60%)

Query:     1 MKSCNEWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWE 60
             +K  ++W P+I M+  +    +VN  +KK L+ G+N ++    R+ +++ +L PI YF E
Sbjct:     8 VKVVSKWPPMIVMVTSQVAMGSVNALVKKALDVGVNHMIIGAYRMAISSFILVPIAYFLE 67

Query:    61 RNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPF 120
             R   PK+T R++   F S ++G SL Q+F+LLG+ YTSAT ACA ++++P ITF  AL  
Sbjct:    68 RKIIPKITFRLMVDHFISGLLGASLMQFFYLLGLSYTSATVACALVSLMPAITFAFALIL 127

Query:   121 GLETV-DIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRK 179
               E + D+K  +G  KV+GTL+CI GA+ LT YKG P   +S+S  E    + H +    
Sbjct:   128 RTEKIKDLKTQAGMIKVMGTLICISGALFLTFYKG-PHISNSHSHLEA---LPHNNSDHN 183

Query:   180 TERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRN 239
             T+ W  G + L +G +L + W   Q  +  +YPCK+SST ++S+F A Q A+L L  +R+
Sbjct:   184 TKNWLLGCLYLVIGIVLLSLWILFQGTLSIKYPCKFSSTCLMSIFAAFQCALLSLYKSRD 243

Query:   240 HSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPL 299
                W       I  ++YAG++G  +  V  TW + + G VF +A  P+  I A +FD  +
Sbjct:   244 LKHWIIDDGFVIGVIIYAGVIGQAMSTVAATWGINRLGAVFASAIMPVSLISATLFDFLI 303

Query:   300 LHERLHIGSLLGSITVIIGLYILLWGKNKEMQ 331
             LH  L++GS++GS+  IIGLY+ LWGKNKE +
Sbjct:   304 LHTPLYLGSVIGSVGTIIGLYVFLWGKNKETE 335

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2012255 UMAMIT25 "Usually multiple acids move in and out Transporters 25" [Arabidopsis thaliana (taxid:3702)]

 Score = 666 (239.5 bits), Expect = 2.0e-65, P = 2.0e-65
 Identities = 131/340 (38%), Positives = 206/340 (60%)

Query:     9 PLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLT 68
             P +AM+ V+ G+A +NI  K  +E GM  L+ +  R + ATI   P+ +F ER +RPK+T
Sbjct:     8 PFLAMVLVQIGYAGMNITSKMAMEAGMKPLILVAYRQIFATIATFPVAFFLERKTRPKIT 67

Query:    69 LRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIK 128
             LRIL  +FF +I G +  Q  + +G+Q +S T ACA  N++P +TF++A  F  ETV IK
Sbjct:    68 LRILVQVFFCSITGATGNQVLYFVGLQNSSPTIACALTNLLPAVTFLLAAIFRQETVGIK 127

Query:   129 GISGKAKVVGTLVCIGGAMLLTLYKGMPL-FDHSYSQAETAINVMHMHPTRKTERWTFGT 187
               SG+AKV+GTLVC+ GAM+L+ Y G  +    S      A N+     +     +  G 
Sbjct:   128 KASGQAKVIGTLVCVIGAMVLSFYHGHTIGIGESKIHWAYAENITKHGSSSGHSNFFLGP 187

Query:   188 IALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKG 247
               +    + WA+WF IQ+ + + +   Y+ST ++ L G+IQ   + L ++   S WS   
Sbjct:   188 FLIMAAAVSWAAWFIIQTKMSETFAAPYTSTLLMCLMGSIQCGAIALISDHTISDWSLSS 247

Query:   248 KIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIG 307
              +  IS LYAG+V S L +  ++W +++KGP++ + FSPL+ ++ A+F   LL E+L+ G
Sbjct:   248 PLRFISALYAGVVASALAFCLMSWAMQRKGPLYVSVFSPLLLVVVAIFSWALLEEKLYTG 307

Query:   308 SLLGSITVIIGLYILLWGKNKEMQNCVSKVTQEAEDIKEQ 347
             + +GS  V+IGLY +LWGK++E    VS+  +E E +K+Q
Sbjct:   308 TFMGSALVVIGLYGVLWGKDRE----VSEKEEEREKVKQQ 343

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2092702 UMAMIT4 "AT3G18200" [Arabidopsis thaliana (taxid:3702)]

 Score = 619 (223.0 bits), Expect = 1.9e-60, P = 1.9e-60
 Identities = 125/338 (36%), Positives = 199/338 (58%)

Query:     8 KPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKL 67
             K ++A+I ++F FA  +I  +  L  G++++V+   R L+A +L+ P  YF+E+  RP L
Sbjct:    34 KLVVALITLQFCFAGFHIVSRVALNIGVSKVVYPVYRNLLALLLIGPFAYFFEKKERPPL 93

Query:    68 TLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDI 127
             T+ +L   FF A++G +  Q F+LLG+ Y + TFA A  N VP ITF++A    LE +D+
Sbjct:    94 TISLLAQFFFLALIGITANQGFYLLGLYYATPTFASAMQNSVPAITFIMACALRLEHIDL 153

Query:   128 KGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYS-QAETAINVMHMHPTRKTERWTFG 186
                 G AKV+GTLV IGGA ++TLY+G P+FD   + Q E  +   + H        T G
Sbjct:   154 VRKHGVAKVLGTLVSIGGATVITLYRGFPIFDQGLNMQKEEVVGSDNSHSL------TLG 207

Query:   187 TIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFK 246
              + L    L WA W  +Q+ + K+YP K + T+    FG IQ  ++ L    + + W   
Sbjct:   208 WLYLMGHCLSWAGWMVLQAPVLKQYPAKLTLTSFTCFFGLIQFLVIALFVETDLNNWIIV 267

Query:   247 GKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHI 306
                E+ ++LYAGI+ SGL     TWC+ K GPVF A F PL  ++ A     +L ++L+ 
Sbjct:   268 SWEELFTILYAGIIASGLVVYLQTWCIYKSGPVFVAVFQPLQTLLVAAMAFLILGDQLYS 327

Query:   307 GSLLGSITVIIGLYILLWGKNKEMQNCVSKVTQEAEDI 344
             G ++G++ +++GLY++LWGKN+E +  + +  Q+ E +
Sbjct:   328 GGIVGAVFIMLGLYLVLWGKNEERKLALEESQQDPESL 365

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2169414 UMAMIT9 "Usually multiple acids move in and out Transporters 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 612 (220.5 bits), Expect = 1.0e-59, P = 1.0e-59
 Identities = 125/346 (36%), Positives = 204/346 (58%)

Query:     8 KPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKL 67
             KP  AMI+++FG+A +NI  K  L  GM+  V +  R  +AT ++AP  +F+ER ++PK+
Sbjct:    17 KPYFAMISLQFGYAGMNIITKISLNTGMSHYVLVVYRHAIATAVIAPFAFFFERKAQPKI 76

Query:    68 TLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDI 127
             T  I   LF   ++G  + Q F+ +G++YTS TF+CA  NM+P +TF++A+ F +E +D+
Sbjct:    77 TFSIFMQLFILGLLGPVIDQNFYYMGLKYTSPTFSCAMSNMLPAMTFILAVLFRMEMLDL 136

Query:   128 KGISGKAKVVGTLVCIGGAMLLTLYKG--MPLFDHSYS--QAETAINVMHMHPTRKTERW 183
             K +  +AK+ GT+V + GAML+T+YKG  + LF   Y   Q  +  N      +   + +
Sbjct:   137 KKLWCQAKIAGTVVTVAGAMLMTIYKGPIVELFWTKYMHIQDSSHANTTSSKNSSSDKEF 196

Query:   184 TFGTIALTVGTLLWASWFPIQSYIGKRYPC-KYSSTAILSLFGAIQAAILCLATNRNHSA 242
               G+I L   TL WAS F +Q+ I K Y   + S T ++   G +QA  +      N SA
Sbjct:   197 LKGSILLIFATLAWASLFVLQAKILKTYAKHQLSLTTLICFIGTLQAVAVTFVMEHNPSA 256

Query:   243 WSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHE 302
             W     + +++  Y+GIV S + Y      +KK+GPVF  AFSPL+ ++ A+    +L E
Sbjct:   257 WRIGWDMNLLAAAYSGIVASSISYYVQGIVMKKRGPVFATAFSPLMMVIVAVMGSFVLAE 316

Query:   303 RLHIGSLLGSITVIIGLYILLWGKNKEMQNCVSKVTQEAEDIKEQE 348
             ++ +G ++G++ ++IGLY +LWGK KE Q  + ++ +   + K  E
Sbjct:   317 KIFLGGVIGAVLIVIGLYAVLWGKQKENQVTICELAKIDSNSKVTE 362

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9LI65	WTR24_ARATH	No assigned EC number	0.4837	0.9228	0.9203	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00000454001 SubName- Full=Chromosome chr2 scaffold_105, whole genome shotgun sequence; (368 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	363
PLN00411	358	PLN00411, PLN00411, nodulin MtN21 family protein;	2e-38
COG0697	292	COG0697, RhaT, Permeases of the drug/metabolite tr	3e-11
pfam00892	126	pfam00892, EamA, EamA-like transporter family	3e-10
pfam00892	126	pfam00892, EamA, EamA-like transporter family	1e-07

>gnl|CDD|177805 PLN00411, PLN00411, nodulin MtN21 family protein; Provisional

 Score =  140 bits (354), Expect = 2e-38
 Identities = 94/329 (28%), Positives = 176/329 (53%), Gaps = 13/329 (3%)

Query: 10  LIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERN-SRPKLT 68
           L AM+A E     ++   K    +G+N   F+    L+A++LL P  +F  R+ S P L+
Sbjct: 15  LTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLS 74

Query: 69  LRILFCLFFSAIVGTS--LTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVD 126
           + IL  +     +G+   +T Y   +GI+Y++ T A A  N+ P +TF++A+ F +E V 
Sbjct: 75  VSILSKIGLLGFLGSMYVITGY---IGIEYSNPTLASAISNITPALTFILAIIFRMEKVS 131

Query: 127 IKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHP--TRKTERWT 184
            K  S  AKV+GT++ + GA+++  Y G  +F    + +   +N   + P  +     W 
Sbjct: 132 FKERSSVAKVMGTILSLIGALVVIFYHGPRVF---VASSPPYLNFRQLSPPLSSSNSDWL 188

Query: 185 FGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNH-SAW 243
            G   LT+  +  +  F +Q++I   YP  ++ + + ++  +I  +++ L   +N+ S W
Sbjct: 189 IGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVW 248

Query: 244 SFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHER 303
                I +I+++   I+ S + YV  +W V+ KGP++ A F PL  ++A +     L++ 
Sbjct: 249 IIHFDITLITIVTMAIITS-VYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDS 307

Query: 304 LHIGSLLGSITVIIGLYILLWGKNKEMQN 332
           L++G L+G I + +G Y ++WGK  E ++
Sbjct: 308 LYLGCLIGGILITLGFYAVMWGKANEEKD 336

Length = 358

>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

 Score = 63.3 bits (154), Expect = 3e-11
 Identities = 71/320 (22%), Positives = 125/320 (39%), Gaps = 36/320 (11%)

Query: 10  LIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTL 69
           L+A++     +    I LK  +E     L     R L+A +LL P+     R  RP   L
Sbjct: 9   LLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLRP--AL 66

Query: 70  RILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKG 129
           R    L   A++G +L      L ++YTSA+ A   I ++P+ T ++A+   L       
Sbjct: 67  RPWLLLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLL-----GE 121

Query: 130 ISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIA 189
                +++G L+ + G +L+ L  G                               G + 
Sbjct: 122 RLSLLQILGILLALAGVLLILLGGGGGGI-----------------------LSLLGLLL 158

Query: 190 LTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKI 249
                LLWA +  +   + +  P   +   +L L  A+   +L   +       S     
Sbjct: 159 ALAAALLWALYTALVKRLSRLGP--VTLALLLQLLLALLLLLLFFLSGFGAPILSR---- 212

Query: 250 EIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSL 309
             + +LY G+  +GL Y+   + ++  G    A  S L  + AA+  + LL E L    L
Sbjct: 213 AWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQL 272

Query: 310 LGSITVIIGLYILLWGKNKE 329
           LG+  V++G+ +      + 
Sbjct: 273 LGAALVVLGVLLASLRARRR 292

Length = 292

>gnl|CDD|216178 pfam00892, EamA, EamA-like transporter family

 Score = 56.9 bits (138), Expect = 3e-10
 Identities = 35/134 (26%), Positives = 68/134 (50%), Gaps = 8/134 (5%)

Query: 18  FGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFF 77
             +A   +F KK+LE  ++ L F   R L+A ILL  +  F  R     L+L+ +  L +
Sbjct: 1   LSWALYFVFSKKLLER-ISPLTFTAYRFLIAGILLILL-LFLLRKPFALLSLKAILALLY 58

Query: 78  SAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVV 137
             + GT+L    +   ++Y SA+ A    ++ PV T ++++    E + +K      +++
Sbjct: 59  LGLFGTALGYLLYFYALKYVSASNASVITSLSPVFTLILSVLLLGEKLTLK------QLL 112

Query: 138 GTLVCIGGAMLLTL 151
           G ++ + G +L+ L
Sbjct: 113 GIVLILLGVLLILL 126

This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Length = 126

>gnl|CDD|216178 pfam00892, EamA, EamA-like transporter family

 Score = 49.9 bits (120), Expect = 1e-07
 Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 4/130 (3%)

Query: 195 LLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISV 254
           L WA +F     + +R     + TA   L   I   +L     +  +  S K    I+++
Sbjct: 1   LSWALYFVFSKKLLERIS-PLTFTAYRFLIAGILLILLLFLLRKPFALLSLKA---ILAL 56

Query: 255 LYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSIT 314
           LY G+ G+ L Y+   + +K       +  + L  +   +  + LL E+L +  LLG + 
Sbjct: 57  LYLGLFGTALGYLLYFYALKYVSASNASVITSLSPVFTLILSVLLLGEKLTLKQLLGIVL 116

Query: 315 VIIGLYILLW 324
           +++G+ ++L 
Sbjct: 117 ILLGVLLILL 126

This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Length = 126

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	363
PLN00411	358	nodulin MtN21 family protein; Provisional	100.0
PRK11272	292	putative DMT superfamily transporter inner membran	100.0
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	100.0
PRK11689	295	aromatic amino acid exporter; Provisional	100.0
PRK15430	296	putative chloramphenical resistance permease RarD;	100.0
PRK10532	293	threonine and homoserine efflux system; Provisiona	100.0
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	100.0
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.97
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.96
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.96
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.95
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.95
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.93
COG2962	293	RarD Predicted permeases [General function predict	99.91
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.9
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.9
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.89
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.85
KOG2765	416	consensus Predicted membrane protein [Function unk	99.82
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.77
COG2510	140	Predicted membrane protein [Function unknown]	99.71
KOG2766	336	consensus Predicted membrane protein [Function unk	99.7
KOG1580	337	consensus UDP-galactose transporter related protei	99.69
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.66
KOG1581	327	consensus UDP-galactose transporter related protei	99.61
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.6
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.59
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.57
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.55
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.54
COG2510	140	Predicted membrane protein [Function unknown]	99.51
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.44
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	99.39
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.33
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.32
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.32
PRK13499	345	rhamnose-proton symporter; Provisional	99.3
PF13536	113	EmrE: Multidrug resistance efflux transporter	99.26
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	99.25
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.19
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.19
PRK11272	292	putative DMT superfamily transporter inner membran	99.16
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	99.14
PRK15430	296	putative chloramphenical resistance permease RarD;	99.12
PLN00411	358	nodulin MtN21 family protein; Provisional	99.1
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.08
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.08
PRK11689	295	aromatic amino acid exporter; Provisional	99.02
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	99.0
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.94
KOG1582	367	consensus UDP-galactose transporter related protei	98.93
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.9
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	98.88
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	98.87
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.84
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.8
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.73
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.69
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.62
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.6
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.59
KOG2922	335	consensus Uncharacterized conserved protein [Funct	98.58
COG2962	293	RarD Predicted permeases [General function predict	98.56
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	98.53
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.52
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.4
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	98.14
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	98.03
KOG4510	346	consensus Permease of the drug/metabolite transpor	97.97
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	97.96
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	97.96
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.91
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.88
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.79
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	97.76
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	97.66
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.53
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.52
COG2076	106	EmrE Membrane transporters of cations and cationic	97.5
COG2076	106	EmrE Membrane transporters of cations and cationic	97.49
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.46
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	97.45
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.45
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	97.43
PRK11431	105	multidrug efflux system protein; Provisional	97.42
PRK11431	105	multidrug efflux system protein; Provisional	97.4
PRK13499	345	rhamnose-proton symporter; Provisional	97.38
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.34
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	97.08
KOG2765	416	consensus Predicted membrane protein [Function unk	97.06
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	97.04
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	96.95
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.94
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	96.93
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	96.85
KOG1581	327	consensus UDP-galactose transporter related protei	96.18
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	96.12
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	96.06
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	95.91
KOG2922	335	consensus Uncharacterized conserved protein [Funct	95.55
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	95.4
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	94.16
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	93.97
KOG1580	337	consensus UDP-galactose transporter related protei	93.35
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	93.06
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	93.03
KOG4831	125	consensus Unnamed protein [Function unknown]	92.3
KOG1443	349	consensus Predicted integral membrane protein [Fun	89.62
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	89.32
PRK02237	109	hypothetical protein; Provisional	87.8
PF07168	336	Ureide_permease: Ureide permease; InterPro: IPR009	86.52
PF02694	107	UPF0060: Uncharacterised BCR, YnfA/UPF0060 family;	86.22
PRK02237	109	hypothetical protein; Provisional	86.1
KOG3912	372	consensus Predicted integral membrane protein [Gen	85.74
PF02694	107	UPF0060: Uncharacterised BCR, YnfA/UPF0060 family;	84.45

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=100.00  E-value=8.6e-38  Score=290.63  Aligned_cols=315  Identities=28%  Similarity=0.535  Sum_probs=249.2

Q ss_pred             CChHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcc-CCCCcCCHHHHHHHHHHHHHHH
Q 017940            5 NEWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWER-NSRPKLTLRILFCLFFSAIVGT   83 (363)
Q Consensus         5 ~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~   83 (363)
                      |..+.++.+++.-+.++...++.|...+.|++|..+.++|+.++.++++++.+.+++ +..++.+++++....+.|+++ 
T Consensus        10 ~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g-   88 (358)
T PLN00411         10 REAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLG-   88 (358)
T ss_pred             hccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHH-
Confidence            457899999999999999999999999999999999999999999999988876544 333445688899999999998 


Q ss_pred             HHHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHh------CccccccccccCccceehhhHHHHhHHHhhhhcCCCc
Q 017940           84 SLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPF------GLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPL  157 (363)
Q Consensus        84 ~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~------~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~  157 (363)
                      +.++.+++.|++|+++++++++.++.|+++.++++++      +|||+++++      ++|+++++.|+.++...++...
T Consensus        89 ~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~------~~G~~l~~~Gv~ll~~~~g~~~  162 (358)
T PLN00411         89 SMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAK------VMGTILSLIGALVVIFYHGPRV  162 (358)
T ss_pred             HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHH------HHHHHHHHHHHHHHHHccCccc
Confidence            7788899999999999999999999999999999999      578888777      9999999999999876444221


Q ss_pred             cCCCcchhhhhhhhhcCC-CC-CCCccchhhHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHH
Q 017940          158 FDHSYSQAETAINVMHMH-PT-RKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLA  235 (363)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (363)
                      ..++   +....|..+.+ +. ....+...|++++++++++||+|++.+|+..++++++...+++...++.+...+....
T Consensus       163 ~~~~---~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~  239 (358)
T PLN00411        163 FVAS---SPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLV  239 (358)
T ss_pred             cccc---ccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHH
Confidence            0000   00000000000 00 1123345699999999999999999999998887666677777777777776666665


Q ss_pred             hcC-CCcccccccchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHH
Q 017940          236 TNR-NHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSIT  314 (363)
Q Consensus       236 ~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~l  314 (363)
                      .++ +...+..........+++.+++ +.++|.+|++++++.+|++++++.+++|+++++++++++||++++.+++|+++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~i~y~~i~-t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~L  318 (358)
T PLN00411        240 VEKNNPSVWIIHFDITLITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGIL  318 (358)
T ss_pred             HccCCcccceeccchHHHHHHHHHHH-HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHH
Confidence            543 2222321122234457777765 56899999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhheecccccc
Q 017940          315 VIIGLYILLWGKNKEM  330 (363)
Q Consensus       315 i~~g~~l~~~~~~~~~  330 (363)
                      +++|+++..+.++||.
T Consensus       319 Il~Gv~l~~~~~~~~~  334 (358)
T PLN00411        319 ITLGFYAVMWGKANEE  334 (358)
T ss_pred             HHHHHHHHHhhhhhhh
Confidence            9999999988666553

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=100.00  E-value=7.6e-33  Score=253.31  Aligned_cols=280  Identities=15%  Similarity=0.168  Sum_probs=234.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHHHH
Q 017940            8 KPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLTQ   87 (363)
Q Consensus         8 ~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   87 (363)
                      .-++..++..++||.++++.|...+ +++|..++++|+.++.++++++...+++ +  ..+++++......|.++...++
T Consensus         8 ~~~~~~~~~~~iWg~~~~~~K~~~~-~~~p~~~~~~R~~~a~l~ll~~~~~~~~-~--~~~~~~~~~~~~~g~~~~~~~~   83 (292)
T PRK11272          8 PLFGALFALYIIWGSTYLVIRIGVE-SWPPLMMAGVRFLIAGILLLAFLLLRGH-P--LPTLRQWLNAALIGLLLLAVGN   83 (292)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHhc-cCCHHHHHHHHHHHHHHHHHHHHHHhCC-C--CCcHHHHHHHHHHHHHHHHHHH
Confidence            3456778889999999999999888 6999999999999999998887755322 2  2356788888889988767788


Q ss_pred             HHHHHHh-hccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCCcchhh
Q 017940           88 YFFLLGI-QYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAE  166 (363)
Q Consensus        88 ~~~~~al-~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~~~~~~  166 (363)
                      .+++.+. +++++++++++.++.|+++.+++++ +|||+++++      ++|++++++|+.++...++            
T Consensus        84 ~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~------~~~~~la~~Gv~ll~~~~~------------  144 (292)
T PRK11272         84 GMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLE------WLGIAIGLAGIVLLNSGGN------------  144 (292)
T ss_pred             HHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhH------HHHHHHHHHhHHHHhcCcc------------
Confidence            8999999 9999999999999999999999986 699999999      9999999999998863211            


Q ss_pred             hhhhhhcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccc
Q 017940          167 TAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFK  246 (363)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (363)
                                   .+....|++++++++++||.+.+..||..++  ++...+.+....+.+...+.....+.+...  ..
T Consensus       145 -------------~~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~  207 (292)
T PRK11272        145 -------------LSGNPWGAILILIASASWAFGSVWSSRLPLP--VGMMAGAAEMLAAGVVLLIASLLSGERLTA--LP  207 (292)
T ss_pred             -------------cccchHHHHHHHHHHHHHHHHHHHHHhcCCC--cchHHHHHHHHHHHHHHHHHHHHcCCcccc--cC
Confidence                         1122379999999999999999999997654  345667788888888777776554332211  12


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheecc
Q 017940          247 GKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGK  326 (363)
Q Consensus       247 ~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~  326 (363)
                      +...|..+++.+++++.+++.+|++++++.+++.++.+.+++|+++.+++++++||++++.+++|+++++.|+++.++.+
T Consensus       208 ~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~  287 (292)
T PRK11272        208 TLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGK  287 (292)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence            44578899999999999999999999999999999999999999999999999999999999999999999999987654


Q ss_pred             c
Q 017940          327 N  327 (363)
Q Consensus       327 ~  327 (363)
                      +
T Consensus       288 ~  288 (292)
T PRK11272        288 Y  288 (292)
T ss_pred             h
Confidence            4

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=100.00  E-value=7.1e-32  Score=247.72  Aligned_cols=280  Identities=18%  Similarity=0.153  Sum_probs=217.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHHHHH
Q 017940            9 PLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLTQY   88 (363)
Q Consensus         9 ~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   88 (363)
                      ..++.++++++||.++++.|...+ +++|..+.++|+.++.+.++++..   ++   +.+++   .....|++.....+.
T Consensus         5 ~~l~~l~~~~~Wg~~~~~~k~~~~-~~~p~~~~~~R~~~a~~~l~~~~~---~~---~~~~~---~~~~~g~~~~~~~~~   74 (299)
T PRK11453          5 DGVLALLVVVVWGLNFVVIKVGLH-NMPPLMLAGLRFMLVAFPAIFFVA---RP---KVPLN---LLLGYGLTISFGQFA   74 (299)
T ss_pred             HHHHHHHHHHHHhhhHHHHHHHHh-cCCHHHHHHHHHHHHHHHHHHHhc---CC---CCchH---HHHHHHHHHHHHHHH
Confidence            456788999999999999999988 699999999999998776655431   11   12222   334445554455666


Q ss_pred             HHHHHhhc-cCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCCcchhhh
Q 017940           89 FFLLGIQY-TSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAET  167 (363)
Q Consensus        89 ~~~~al~~-~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~~~~~~~  167 (363)
                      +++.++++ .++++++++.++.|+++.+++++++|||+++++      +++++++++|+.++...+.             
T Consensus        75 ~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~------~~~~~l~~~Gv~ll~~~~~-------------  135 (299)
T PRK11453         75 FLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQ------LAGIALAIFGVLVLIEDSL-------------  135 (299)
T ss_pred             HHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHH------HHHHHHHHHhHHHhccccC-------------
Confidence            78899998 588999999999999999999999999999999      9999999999998874211             


Q ss_pred             hhhhhcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhccCCCc--hhHHHHHHHHHHHHHHHHHHHhcCCC---cc
Q 017940          168 AINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCK--YSSTAILSLFGAIQAAILCLATNRNH---SA  242 (363)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~---~~  242 (363)
                               + .......|++++++++++|+.|.+..|+..++.+++  .....+....+.+.........+.+.   ..
T Consensus       136 ---------~-~~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (299)
T PRK11453        136 ---------N-GQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHS  205 (299)
T ss_pred             ---------C-CcchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhh
Confidence                     0 111224799999999999999999999987653332  23334444444433333333333221   11


Q ss_pred             cccccchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhh
Q 017940          243 WSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYIL  322 (363)
Q Consensus       243 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~  322 (363)
                      +...+...|..+++.+++++.++|.+|++++++.++.+++.+.+++|+++.+++++++||+++..+++|++++++|+++.
T Consensus       206 ~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~  285 (299)
T PRK11453        206 LVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYIN  285 (299)
T ss_pred             hccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHH
Confidence            11224457899999999999999999999999999999999999999999999999999999999999999999999988


Q ss_pred             eeccc
Q 017940          323 LWGKN  327 (363)
Q Consensus       323 ~~~~~  327 (363)
                      .+.++
T Consensus       286 ~~~~~  290 (299)
T PRK11453        286 VFGLR  290 (299)
T ss_pred             hcchh
Confidence            77664

>PRK11689 aromatic amino acid exporter; Provisional

Probab=100.00  E-value=9.6e-32  Score=246.28  Aligned_cols=285  Identities=14%  Similarity=0.093  Sum_probs=215.8

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHH
Q 017940            6 EWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSL   85 (363)
Q Consensus         6 ~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   85 (363)
                      +.++++++++++++||.+++..|...+ +++|..+.++|+.++.++++++..   +++.++.+   + ...+.+.++...
T Consensus         2 ~~~~~l~~l~a~~~Wg~~~~~~k~~~~-~~~P~~~~~~R~~~a~l~l~~~~~---~~~~~~~~---~-~~~~~~~l~~~~   73 (295)
T PRK11689          2 SQKATLIGLIAILLWSTMVGLIRGVSE-SLGPVGGAAMIYSVSGLLLLLTVG---FPRLRQFP---K-RYLLAGGLLFVS   73 (295)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHHc-cCChHHHHHHHHHHHHHHHHHHcc---cccccccc---H-HHHHHHhHHHHH
Confidence            456888999999999999999999988 699999999999999988886531   11111111   2 233445555678


Q ss_pred             HHHHHHHHhhc----cCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCC
Q 017940           86 TQYFFLLGIQY----TSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHS  161 (363)
Q Consensus        86 ~~~~~~~al~~----~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~  161 (363)
                      ++.+++.++++    .++++++++.++.|+++.+++++++|||+++++      ++|++++++|+.++...+.. .+.  
T Consensus        74 ~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~------~~g~~l~~~Gv~li~~~~~~-~~~--  144 (295)
T PRK11689         74 YEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLL------IPGLLLALAGVAWVLGGDNG-LSL--  144 (295)
T ss_pred             HHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHH------HHHHHHHHHhHhheecCCcc-chh--
Confidence            88888888765    577788999999999999999999999999999      99999999999998753210 000  


Q ss_pred             cchhhhhhhhhcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHHhcCCCc
Q 017940          162 YSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHS  241 (363)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (363)
                      .+.            ..+..+...|++++++++++||.|.++.||..++. ++.....   ..+.+...+.....+ +. 
T Consensus       145 ~~~------------~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~-~~~~~~~---~~~~~~l~~~~~~~~-~~-  206 (295)
T PRK11689        145 AEL------------INNIASNPLSYGLAFIGAFIWAAYCNVTRKYARGK-NGITLFF---ILTALALWIKYFLSP-QP-  206 (295)
T ss_pred             hhh------------hhccccChHHHHHHHHHHHHHHHHHHHHhhccCCC-CchhHHH---HHHHHHHHHHHHHhc-Cc-
Confidence            000            00111234699999999999999999999997663 5554322   223333333333322 21 


Q ss_pred             ccccccchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhh
Q 017940          242 AWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYI  321 (363)
Q Consensus       242 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l  321 (363)
                      ... .+...|..+++.++ +++++|.+|++++++.++++++.+.+++|+++.+++++++||+++..+++|+++++.|+++
T Consensus       207 ~~~-~~~~~~~~l~~~~~-~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~  284 (295)
T PRK11689        207 AMV-FSLPAIIKLLLAAA-AMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLL  284 (295)
T ss_pred             ccc-CCHHHHHHHHHHHH-HHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHH
Confidence            111 13356777777774 7889999999999999999999999999999999999999999999999999999999988


Q ss_pred             heeccc
Q 017940          322 LLWGKN  327 (363)
Q Consensus       322 ~~~~~~  327 (363)
                      ..+.++
T Consensus       285 ~~~~~~  290 (295)
T PRK11689        285 CWLATR  290 (295)
T ss_pred             HhhhHh
Confidence            876554

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=100.00  E-value=3.5e-31  Score=242.65  Aligned_cols=282  Identities=12%  Similarity=0.077  Sum_probs=212.0

Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCCC---cCCHHHHHHHHH
Q 017940            1 MKSCNEWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRP---KLTLRILFCLFF   77 (363)
Q Consensus         1 M~~~~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~---~~~~~~~~~~~~   77 (363)
                      |+++++.+|++++++++++||..+++.|.. + +++|.++.++|+.++.+++.++...+++....   ..+++.+.. ..
T Consensus         1 ~~~~~~~~g~~~~l~a~~~wg~~~~~~k~~-~-~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~   77 (296)
T PRK15430          1 MDAKQTRQGVLLALAAYFIWGIAPAYFKLI-Y-YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFM-LA   77 (296)
T ss_pred             CCchhhhhHHHHHHHHHHHHHHHHHHHHHh-c-CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHH-HH
Confidence            666678899999999999999999999975 5 59999999999999998887776543221110   013444433 33


Q ss_pred             HHHHHHHHHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCc
Q 017940           78 SAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPL  157 (363)
Q Consensus        78 ~g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~  157 (363)
                      .+.++.+.++.++++|++++++++++++.++.|+++.+++++++|||+++++      ++|+++++.|+.++...++   
T Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~------~~g~~l~~~Gv~li~~~~~---  148 (296)
T PRK15430         78 VSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQ------WLAVILAICGVLVQLWTFG---  148 (296)
T ss_pred             HHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHH------HHHHHHHHHHHHHHHHHcC---
Confidence            5666678999999999999999999999999999999999999999999999      9999999999999874211   


Q ss_pred             cCCCcchhhhhhhhhcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhccCC-CchhHHHHHHHHHHHHHHHHHHHh
Q 017940          158 FDHSYSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYP-CKYSSTAILSLFGAIQAAILCLAT  236 (363)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  236 (363)
                                            +.     ..++++++++||.|.+..|+..++.. +....+.+....+.....+.   .
T Consensus       149 ----------------------~~-----~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~  198 (296)
T PRK15430        149 ----------------------SL-----PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAI---A  198 (296)
T ss_pred             ----------------------Cc-----cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHH---c
Confidence                                  10     14688899999999999998754311 12222333333333322111   1


Q ss_pred             cCCCcccccccchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHH
Q 017940          237 NRNHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVI  316 (363)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~  316 (363)
                      ......+...+...+..+...|+ .+.++|.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++++
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~g~-~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~  277 (296)
T PRK15430        199 DSSTSHMGQNPMSLNLLLIAAGI-VTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIW  277 (296)
T ss_pred             cCCcccccCCcHHHHHHHHHHHH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence            11111111111112333444454 57799999999999999999999999999999999999999999999999999998


Q ss_pred             HHhhhheec
Q 017940          317 IGLYILLWG  325 (363)
Q Consensus       317 ~g~~l~~~~  325 (363)
                      +|+.+....
T Consensus       278 ~~~~v~~~~  286 (296)
T PRK15430        278 VALAIFVMD  286 (296)
T ss_pred             HHHHHHHHH
Confidence            888877643

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=100.00  E-value=1.8e-30  Score=237.65  Aligned_cols=277  Identities=15%  Similarity=0.106  Sum_probs=223.1

Q ss_pred             CChHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHH
Q 017940            5 NEWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTS   84 (363)
Q Consensus         5 ~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   84 (363)
                      .+..++.++++++++|+.++.+.|...+ +++|..+.++|++++.++++++...  ++  .+.++++++..+..|.+ ..
T Consensus         9 ~~~~~~~~~~la~~~~~~~~~~~K~~~~-~~~~~~~~~~R~~~a~l~l~~~~~~--~~--~~~~~~~~~~~~~~g~~-~~   82 (293)
T PRK10532          9 PVWLPILLLLIAMASIQSGASLAKSLFP-LVGAPGVTALRLALGTLILIAIFKP--WR--LRFAKEQRLPLLFYGVS-LG   82 (293)
T ss_pred             ccchHHHHHHHHHHHHHhhHHHHHHHHH-HcCHHHHHHHHHHHHHHHHHHHHhH--Hh--ccCCHHHHHHHHHHHHH-HH
Confidence            3468999999999999999999999998 5999999999999999888876532  11  13467888888888887 58


Q ss_pred             HHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCCcch
Q 017940           85 LTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQ  164 (363)
Q Consensus        85 ~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~~~~  164 (363)
                      ..+.++++++++++++.++++..+.|+++.+++    +||++  +      ..++.+++.|+.++...+. +        
T Consensus        83 ~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~--~------~~~~~i~~~Gv~li~~~~~-~--------  141 (293)
T PRK10532         83 GMNYLFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPV--D------FVWVVLAVLGLWFLLPLGQ-D--------  141 (293)
T ss_pred             HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChH--H------HHHHHHHHHHHheeeecCC-C--------
Confidence            888999999999999999999999999998876    35443  3      4567788999988763211 1        


Q ss_pred             hhhhhhhhcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccc
Q 017940          165 AETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWS  244 (363)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (363)
                                    .......|++++++++++||.|.+..|+..++. ++... .+....+.+...+.....+. ...+ 
T Consensus       142 --------------~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~-~~~~~-~~~~~~~~~~l~~~~~~~~~-~~~~-  203 (293)
T PRK10532        142 --------------VSHVDLTGAALALGAGACWAIYILSGQRAGAEH-GPATV-AIGSLIAALIFVPIGALQAG-EALW-  203 (293)
T ss_pred             --------------cccCChHHHHHHHHHHHHHHHHHHHHHHHhccC-CchHH-HHHHHHHHHHHHHHHHHccC-cccC-
Confidence                          011234799999999999999999999998763 55555 45556666666666654332 1111 


Q ss_pred             cccchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhhee
Q 017940          245 FKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLW  324 (363)
Q Consensus       245 ~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~  324 (363)
                        +...|..++++|++++.++|.+|++++++.++.+++.+.+++|+++.+++++++||+++..+++|++++++|+....+
T Consensus       204 --~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~  281 (293)
T PRK10532        204 --HWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTL  281 (293)
T ss_pred             --CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHh
Confidence              234566678999999999999999999999999999999999999999999999999999999999999999999976


Q ss_pred             cccc
Q 017940          325 GKNK  328 (363)
Q Consensus       325 ~~~~  328 (363)
                      ..+|
T Consensus       282 ~~~~  285 (293)
T PRK10532        282 TIRR  285 (293)
T ss_pred             cCCC
Confidence            6544

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=100.00  E-value=1.2e-30  Score=235.13  Aligned_cols=258  Identities=16%  Similarity=0.193  Sum_probs=220.1

Q ss_pred             HHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCc
Q 017940           20 FATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSA   99 (363)
Q Consensus        20 ~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~   99 (363)
                      ||.+++..|...+.+.++....+.|+..+.+++.+....+       .+++++.+....|.++..+++.+++.|++++++
T Consensus         1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~   73 (260)
T TIGR00950         1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR-------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPV   73 (260)
T ss_pred             CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc-------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence            8999999999888678999999999999988887765321       345677788888888889999999999999999


Q ss_pred             cchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCCcchhhhhhhhhcCCCCCC
Q 017940          100 TFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRK  179 (363)
Q Consensus       100 ~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (363)
                      ++++++.++.|+++.+++++++|||+++++      ++|++++++|+.++...+  +                       
T Consensus        74 ~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~------~~gi~i~~~Gv~li~~~~--~-----------------------  122 (260)
T TIGR00950        74 GEAALLLYLAPLYVTLLSDLMGKERPRKLV------LLAAVLGLAGAVLLLSDG--N-----------------------  122 (260)
T ss_pred             hhhHHHHhhhHHHHHHHHHHHccCCCcHHH------HHHHHHHHHhHHhhccCC--c-----------------------
Confidence            999999999999999999999999999999      999999999999986321  1                       


Q ss_pred             CccchhhHHHHHHHHHHHHHHHHHHHhhhccCC-CchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhHHHHHHHH
Q 017940          180 TERWTFGTIALTVGTLLWASWFPIQSYIGKRYP-CKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAG  258 (363)
Q Consensus       180 ~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  258 (363)
                      .+....|+.++++++++|+.+.+..|+..++.+ ++.....+.+..+.++..+.....+++. ..   +...|..+++.+
T Consensus       123 ~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~---~~~~~~~~~~~~  198 (260)
T TIGR00950       123 LSINPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP-QA---LSLQWGALLYLG  198 (260)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-Cc---chHHHHHHHHHH
Confidence            123358999999999999999999999987643 2345555778888888888776644322 11   345677788999


Q ss_pred             HHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHh
Q 017940          259 IVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGL  319 (363)
Q Consensus       259 ~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~  319 (363)
                      ++++.+++.+|++++++.++.+++.+.+++|+++.+++++++||+++..+++|+.+++.|+
T Consensus       199 ~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       199 LIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            9999999999999999999999999999999999999999999999999999999999986

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.97  E-value=2.4e-29  Score=231.47  Aligned_cols=282  Identities=13%  Similarity=0.048  Sum_probs=219.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHHHHHHHH
Q 017940           12 AMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLTQYFFL   91 (363)
Q Consensus        12 ~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~   91 (363)
                      +.++-..+--...++.|...++-..|..++++|+.++.+.+.+... .+.++.++.++++++..+..|++. +.++.+.+
T Consensus         6 ~~~~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~   83 (302)
T TIGR00817         6 LFGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWS-SGLPKRLKISSALLKLLLPVAIVH-TIGHVTSN   83 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHHHHH-HHHHHHHH
Confidence            3344444455556788998884366999999999998877655521 122334457899999999999995 88999999


Q ss_pred             HHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCCcchhhhhhhh
Q 017940           92 LGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINV  171 (363)
Q Consensus        92 ~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~  171 (363)
                      .|++|+++++++++.++.|+++.+++++++|||+++++      ++|+++++.|+.+...  +                 
T Consensus        84 ~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~------~~~l~l~~~Gv~l~~~--~-----------------  138 (302)
T TIGR00817        84 VSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTL------WLSLLPIVGGVALASD--T-----------------  138 (302)
T ss_pred             HHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHhhhcC--C-----------------
Confidence            99999999999999999999999999999999999999      9999999999987542  1                 


Q ss_pred             hcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhc--cCCCchhHHHHHHHHHHHHHHHHHHHhcCCCc-c--cc--
Q 017940          172 MHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGK--RYPCKYSSTAILSLFGAIQAAILCLATNRNHS-A--WS--  244 (363)
Q Consensus       172 ~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~--  244 (363)
                            + .+....|++++++++++|+++.+..||..+  + .|+...+.+++..+.+.+.|.....++... .  +.  
T Consensus       139 ------~-~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~  210 (302)
T TIGR00817       139 ------E-LSFNWAGFLSAMISNITFVSRNIFSKKAMTIKS-LDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQA  210 (302)
T ss_pred             ------c-ccccHHHHHHHHHHHHHHHHHHHHHHHhhccCC-CCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHh
Confidence                  1 112247999999999999999999999887  5 378999999999999999998876553111 0  00  


Q ss_pred             ---cccchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhh
Q 017940          245 ---FKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYI  321 (363)
Q Consensus       245 ---~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l  321 (363)
                         ......+...+..++.+....+.++++++++++|++.++..+++|+++++++++++||+++..+++|.++++.|+++
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l  290 (302)
T TIGR00817       211 ISGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFL  290 (302)
T ss_pred             hcccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHH
Confidence               00001122222333322333334566899999999999999999999999999999999999999999999999999


Q ss_pred             heecccc
Q 017940          322 LLWGKNK  328 (363)
Q Consensus       322 ~~~~~~~  328 (363)
                      +++.|++
T Consensus       291 ~~~~k~~  297 (302)
T TIGR00817       291 YSRVKAQ  297 (302)
T ss_pred             HHHHhcc
Confidence            9865543

specificities overlap.

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.96  E-value=1.6e-27  Score=216.94  Aligned_cols=275  Identities=15%  Similarity=0.136  Sum_probs=203.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhc-cCCCCcCCHHHHHHHHHHHHHHHHHHH
Q 017940            9 PLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWE-RNSRPKLTLRILFCLFFSAIVGTSLTQ   87 (363)
Q Consensus         9 ~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~   87 (363)
                      .+++.++++++|+..++..|...++ -++.  .++++....+++.++...+. ++.++..+++.+. ..+.+.++...++
T Consensus         2 ~~~~~~~aa~~~a~~~~~~k~~~~~-~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~   77 (281)
T TIGR03340         2 ALTLVVFSALMHAGWNLMAKSHADK-EPDF--LWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWL-LLAISAVANMVYF   77 (281)
T ss_pred             cHHHHHHHHHHHHHHHHHHhhcCCc-hhHH--HHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHH-HHHHHHHHHHHHH
Confidence            3578899999999999999977663 4443  46667777777777765532 2223323344444 4444445568999


Q ss_pred             HHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCCcchhhh
Q 017940           88 YFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAET  167 (363)
Q Consensus        88 ~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~~~~~~~  167 (363)
                      .++++|++++++++++++.++.|+++.+++++++|||+++++      ++|+.+++.|+.++...+.             
T Consensus        78 ~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~------~~g~~~~~~Gv~ll~~~~~-------------  138 (281)
T TIGR03340        78 LGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLA------WLGILIITLGLLVLGLSRF-------------  138 (281)
T ss_pred             HHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHH------HHHHHHHHHHHHHHhcccc-------------
Confidence            999999999999999999999999999999999999999999      9999999999998874221             


Q ss_pred             hhhhhcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHH-HHHHHHh--cCCCcccc
Q 017940          168 AINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQA-AILCLAT--NRNHSAWS  244 (363)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~  244 (363)
                                  ...+..|+.++++++++|+.|.+..|+..++. ++..........+.+.. .+.....  .++. ...
T Consensus       139 ------------~~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  204 (281)
T TIGR03340       139 ------------AQHRRKAYAWALAAALGTAIYSLSDKAAALGV-PAFYSALGYLGIGFLAMGWPFLLLYLKRHGR-SMF  204 (281)
T ss_pred             ------------cccchhHHHHHHHHHHHHHHhhhhccccccch-hcccccHHHHHHHHHHHHHHHHHHHHHHhcc-chh
Confidence                        11123678899999999999999988875543 22221111111222111 2222211  1111 111


Q ss_pred             cccchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhh
Q 017940          245 FKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYI  321 (363)
Q Consensus       245 ~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l  321 (363)
                       .....+..+++.+.+.+.++|.+|++++++.++++++.+.+++|+++.+++++++||+++..+++|++++++|+++
T Consensus       205 -~~~~~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       205 -PYARQILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             -hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence             1223455667788888999999999999999999999999999999999999999999999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.96  E-value=3e-27  Score=215.54  Aligned_cols=300  Identities=17%  Similarity=0.208  Sum_probs=237.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-hHHHHHHHHHHHHHHHHHHHHhhccC-CCCcCCHHHHHHHHHHHHHHHH
Q 017940            7 WKPLIAMIAVEFGFATVNIFLKKVLEEGMN-ELVFITCRLLVATILLAPIGYFWERN-SRPKLTLRILFCLFFSAIVGTS   84 (363)
Q Consensus         7 ~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~r~~~~~i~l~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~   84 (363)
                      .+..++.=..+++-..+..++....+.|.+ |....++.+..-.++..++..+++.. ++.+..+++|++.++.+++. +
T Consensus        12 ~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~D-v   90 (334)
T PF06027_consen   12 WIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLD-V   90 (334)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHH-H
Confidence            345556666677777778888777766666 88888888887777777766655432 22333456777888889995 8


Q ss_pred             HHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCCcch
Q 017940           85 LTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQ  164 (363)
Q Consensus        85 ~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~~~~  164 (363)
                      .++++.+.|++|++.+.++++.++..+++.+++++++|||+++.|      ++|+++++.|+.++...|....+.     
T Consensus        91 ~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~------~~gv~i~i~Gv~lv~~sD~~~~~~-----  159 (334)
T PF06027_consen   91 EANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFH------ILGVLICIAGVVLVVVSDVLSGSD-----  159 (334)
T ss_pred             HHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHH------HHHHHHHHhhhhheeeeccccccc-----
Confidence            999999999999999999999999999999999999999999999      999999999999988755332111     


Q ss_pred             hhhhhhhhcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHHhcCC-Cccc
Q 017940          165 AETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRN-HSAW  243 (363)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  243 (363)
                                  +++..+...|++++++++++||+++++.++..++. +......+..+++.+++.+.....|.+ ....
T Consensus       160 ------------~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~-~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~  226 (334)
T PF06027_consen  160 ------------SSSGSNPILGDLLALLGAILYAVSNVLEEKLVKKA-PRVEFLGMLGLFGFIISGIQLAILERSGIESI  226 (334)
T ss_pred             ------------CCCCCccchhHHHHHHHHHHHHHHHHHHHHhcccC-CHHHHHHHHHHHHHHHHHHHHHheehhhhhcc
Confidence                        22356678999999999999999999999999985 667888888888998888887776652 2222


Q ss_pred             ccccchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhhe
Q 017940          244 SFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILL  323 (363)
Q Consensus       244 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~  323 (363)
                      .+.. ..+. .+....++.+.-|.+....++..+|+..++-..+..+++++++++++|+++++..++|.++|++|.++++
T Consensus       227 ~w~~-~~~~-~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~  304 (334)
T PF06027_consen  227 HWTS-QVIG-LLVGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYN  304 (334)
T ss_pred             CCCh-hhHH-HHHHHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEE
Confidence            2222 2222 2222334566778888899999999999999999999999999999999999999999999999999999


Q ss_pred             ecccccchhc
Q 017940          324 WGKNKEMQNC  333 (363)
Q Consensus       324 ~~~~~~~~~~  333 (363)
                      ..++++.++.
T Consensus       305 ~~~~~~~~~~  314 (334)
T PF06027_consen  305 LAESPEEEAR  314 (334)
T ss_pred             ccCCcccccc
Confidence            8776654444

Some of the sequences in this family are annotated as putative membrane proteins.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.95  E-value=3.7e-26  Score=213.57  Aligned_cols=283  Identities=13%  Similarity=0.116  Sum_probs=221.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-hHHHHHHHHHHHHHHHHHHHHhhccCCCCcC--CHHHHHHHHHHHHHHH
Q 017940            7 WKPLIAMIAVEFGFATVNIFLKKVLEEGMN-ELVFITCRLLVATILLAPIGYFWERNSRPKL--TLRILFCLFFSAIVGT   83 (363)
Q Consensus         7 ~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~   83 (363)
                      .+..++.+....+-....+..|..++ .++ |..++++|++++.++..+..... .++.++.  .+++++..+..|+++.
T Consensus        48 ~~~~~~~~~wy~~s~~~~~~nK~vl~-~~~~P~~l~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~llp~gl~~~  125 (350)
T PTZ00343         48 WKLALLFLTWYALNVLYVVDNKLALN-MLPLPWTISSLQLFVGWLFALLYWATG-FRKIPRIKSLKLFLKNFLPQGLCHL  125 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH-hCChhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCCCCHHHHHHHHHHHHHHHH
Confidence            45566666666677777888999988 599 99999999999987765543322 2222333  3457888999999974


Q ss_pred             HHHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCCcc
Q 017940           84 SLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYS  163 (363)
Q Consensus        84 ~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~~~  163 (363)
                      . .+...+.|+++++++.++++.++.|+++++++++++|||+++++      ++++++++.|+++.+..+          
T Consensus       126 ~-~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~------~l~l~l~v~Gv~l~~~~~----------  188 (350)
T PTZ00343        126 F-VHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYA------YLSLIPIVGGVALASVKE----------  188 (350)
T ss_pred             H-HHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHH------HHHHHHHHHHHHheeccc----------
Confidence            4 46667899999999999999999999999999999999999999      999999999999987411          


Q ss_pred             hhhhhhhhhcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhccCC------CchhHHHHHHHHHHHHHHHHHHHhc
Q 017940          164 QAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYP------CKYSSTAILSLFGAIQAAILCLATN  237 (363)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~  237 (363)
                                     .+. ...|++++++++++|+++.+..|+..++.+      ++.....+....+.++++|.....|
T Consensus       189 ---------------~~~-~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e  252 (350)
T PTZ00343        189 ---------------LHF-TWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFE  252 (350)
T ss_pred             ---------------chh-HHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence                           112 247999999999999999999999886532      3445556668889999999887654


Q ss_pred             CCC--cccc----cccchhHHHHHHHHHHHHHHHHHHhhh----hcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchh
Q 017940          238 RNH--SAWS----FKGKIEIISVLYAGIVGSGLCYVGLTW----CVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIG  307 (363)
Q Consensus       238 ~~~--~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~----a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~  307 (363)
                      ...  ..+.    ......+..+++. ++.+++++.+++.    +++++++...+...+++|+++++++++++||++++.
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~  331 (350)
T PTZ00343        253 GKKWVPVWTNYTANMTNYTKGIIIFK-IFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLL  331 (350)
T ss_pred             hHHHHHHHHHhhhcccccchHHHHHH-HHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchH
Confidence            311  1010    0011122334443 4557888998884    999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHhhhheec
Q 017940          308 SLLGSITVIIGLYILLWG  325 (363)
Q Consensus       308 ~~~G~~li~~g~~l~~~~  325 (363)
                      +++|.+++++|++++++.
T Consensus       332 ~~iG~~lii~Gv~lYs~~  349 (350)
T PTZ00343        332 GYLGMAVAILGALLYSLF  349 (350)
T ss_pred             hHHHHHHHHHHHHHHhhc
Confidence            999999999999998764

>TIGR00688 rarD rarD protein

Probab=99.95  E-value=1.4e-25  Score=201.58  Aligned_cols=248  Identities=11%  Similarity=0.097  Sum_probs=185.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCC-----CCcCCHHH-HHHHHHHHHH
Q 017940            8 KPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNS-----RPKLTLRI-LFCLFFSAIV   81 (363)
Q Consensus         8 ~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~-----~~~~~~~~-~~~~~~~g~~   81 (363)
                      +|++++++++++||.++++.|. .+ +++|.+++++|++++.++++++...+++++     .++.++++ +......|++
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~-~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   79 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LK-PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL   79 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hc-cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence            5889999999999999999998 45 599999999999999988877664432211     11122333 4445666766


Q ss_pred             HHHHHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCC
Q 017940           82 GTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHS  161 (363)
Q Consensus        82 ~~~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~  161 (363)
                       .+.++.+++.|++++++++++++.++.|+++.+++++++|||+++++      ++++++++.|+.++...++       
T Consensus        80 -~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~------~l~~~~~~~Gv~li~~~~~-------  145 (256)
T TIGR00688        80 -IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQ------FIAVIIATLGVISNIVLKG-------  145 (256)
T ss_pred             -HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHcC-------
Confidence             58999999999999999999999999999999999999999999999      9999999999998864211       


Q ss_pred             cchhhhhhhhhcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHHhcCCCc
Q 017940          162 YSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHS  241 (363)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (363)
                                        +.     ..++++++++||.|.+..|+..++  +........ ........+.....+.. .
T Consensus       146 ------------------~~-----~~~~l~aa~~~a~~~i~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~-~  198 (256)
T TIGR00688       146 ------------------SL-----PWEALVLAFSFTAYGLIRKALKNT--DLAGFCLET-LSLMPVAIYYLLQTDFA-T  198 (256)
T ss_pred             ------------------Cc-----hHHHHHHHHHHHHHHHHHhhcCCC--CcchHHHHH-HHHHHHHHHHHHHhccC-c
Confidence                              10     135788999999999999997654  222222211 11111222111111111 1


Q ss_pred             ccccccchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHH
Q 017940          242 AWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPL  299 (363)
Q Consensus       242 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~  299 (363)
                      .........|..+++.|++ +.++|.++++++++.++++++++.+++|+++.+++.++
T Consensus       199 ~~~~~~~~~~~~l~~~g~~-t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       199 VQQTNPFPIWLLLVLAGLI-TGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             ccccCchhHHHHHHHHHHH-HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            1111122378888888876 78999999999999999999999999999999999764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.93  E-value=1.6e-23  Score=191.42  Aligned_cols=283  Identities=23%  Similarity=0.310  Sum_probs=219.8

Q ss_pred             CChHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHH
Q 017940            5 NEWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTS   84 (363)
Q Consensus         5 ~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   84 (363)
                      +...+....++..+.|+......|...+...++....+.|...+.+...+..... +.... ...+.+.+..+.+.++..
T Consensus         4 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~   81 (292)
T COG0697           4 ALLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLE-PRGLR-PALRPWLLLLLLALLGLA   81 (292)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhh-ccccc-ccccchHHHHHHHHHHHH
Confidence            4567888899999999999999998877436667777779999888844333221 11111 112224556666777789


Q ss_pred             HHHHHHHHHhhccCccchhhhcchhhHHHHHHHH-HhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCCcc
Q 017940           85 LTQYFFLLGIQYTSATFACAFINMVPVITFVIAL-PFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYS  163 (363)
Q Consensus        85 ~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~-l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~~~  163 (363)
                      .++.+++.++++++++.++++.++.|+++.+++. +++|||+++++      ++++.+.+.|+.++...+....      
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~------~~~~~~~~~Gv~lv~~~~~~~~------  149 (292)
T COG0697          82 LPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQ------ILGILLALAGVLLILLGGGGGG------  149 (292)
T ss_pred             HHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHH------HHHHHHHHHhHHheecCCCcch------
Confidence            9999999999999999999999999999999997 77799999999      9999999999999986332110      


Q ss_pred             hhhhhhhhhcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHH-HHHHHHHHHHHHHHHHhcCCCcc
Q 017940          164 QAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTA-ILSLFGAIQAAILCLATNRNHSA  242 (363)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  242 (363)
                                      .. ...|+.+++.++++++.+.+..|+.. + .++..... +...  .............. . 
T Consensus       150 ----------------~~-~~~g~~~~l~a~~~~a~~~~~~~~~~-~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~-  206 (292)
T COG0697         150 ----------------IL-SLLGLLLALAAALLWALYTALVKRLS-R-LGPVTLALLLQLL--LALLLLLLFFLSGF-G-  206 (292)
T ss_pred             ----------------hH-HHHHHHHHHHHHHHHHHHHHHHHHhc-C-CChHHHHHHHHHH--HHHHHHHHHHhccc-c-
Confidence                            11 46899999999999999999999988 4 34455554 3333  11221211211111 1 


Q ss_pred             cccccchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhh
Q 017940          243 WSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYIL  322 (363)
Q Consensus       243 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~  322 (363)
                       .......|..+.+.|++++++++.++++++++.++...+++.+++|+++.++++++++|+++..+++|+.+++.|+.+.
T Consensus       207 -~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~  285 (292)
T COG0697         207 -APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLA  285 (292)
T ss_pred             -ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHH
Confidence             1123457888899999988899999999999999999999999999999999999999999999999999999999998


Q ss_pred             eec
Q 017940          323 LWG  325 (363)
Q Consensus       323 ~~~  325 (363)
                      ..+
T Consensus       286 ~~~  288 (292)
T COG0697         286 SLR  288 (292)
T ss_pred             hcc
Confidence            866

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.91  E-value=5.7e-22  Score=172.35  Aligned_cols=283  Identities=10%  Similarity=0.101  Sum_probs=229.2

Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCCC---cCCHHHHHHHHH
Q 017940            1 MKSCNEWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRP---KLTLRILFCLFF   77 (363)
Q Consensus         1 M~~~~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~---~~~~~~~~~~~~   77 (363)
                      |+ .+..+|+++.+.+.++||..+.+.|.. + ..++.++...|...+.++++.+....++.+..   ..+++.+....+
T Consensus         1 ~~-~~~~~Gil~~l~Ay~lwG~lp~y~kll-~-~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l   77 (293)
T COG2962           1 MA-KDSRKGILLALLAYLLWGLLPLYFKLL-E-PLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLAL   77 (293)
T ss_pred             CC-CcccchhHHHHHHHHHHHHHHHHHHHH-c-cCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHH
Confidence            55 345789999999999999999999965 5 49999999999999999888777665432211   124566777777


Q ss_pred             HHHHHHHHHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCc
Q 017940           78 SAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPL  157 (363)
Q Consensus        78 ~g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~  157 (363)
                      .+++ ...++..|.+|.+....-+++.=+..+|++.++++.+++|||+++.|      +++++++.+||....+..+.  
T Consensus        78 ~a~l-i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q------~iAV~lA~~GV~~~~~~~g~--  148 (293)
T COG2962          78 TALL-IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQ------WIAVGLAAAGVLIQTWLLGS--  148 (293)
T ss_pred             HHHH-HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHH------HHHHHHHHHHHHHHHHHcCC--
Confidence            7877 79999999999999999999999999999999999999999999999      99999999999998874331  


Q ss_pred             cCCCcchhhhhhhhhcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHHhc
Q 017940          158 FDHSYSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATN  237 (363)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (363)
                                             ..     ..++.=++.|+.|....|+..-   |+.+-....+..-....+.+.++.+
T Consensus       149 -----------------------lp-----wval~la~sf~~Ygl~RK~~~v---~a~~g~~lE~l~l~p~al~yl~~l~  197 (293)
T COG2962         149 -----------------------LP-----WVALALALSFGLYGLLRKKLKV---DALTGLTLETLLLLPVALIYLLFLA  197 (293)
T ss_pred             -----------------------Cc-----HHHHHHHHHHHHHHHHHHhcCC---chHHhHHHHHHHHhHHHHHHHHHHh
Confidence                                   11     4677778899999887776542   4455555555555666656555555


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHH
Q 017940          238 RNHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVII  317 (363)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~  317 (363)
                      ...+.....+...+..+...|.+ +.++..++..+.++++-+..+.++|.+|..-.+++.+++||+++..+++..+.+-.
T Consensus       198 ~~~~~~~~~~~~~~~LLv~aG~v-TavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~  276 (293)
T COG2962         198 DSGQFLQQNANSLWLLLVLAGLV-TAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWL  276 (293)
T ss_pred             cCchhhhcCCchHHHHHHHhhHH-HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHH
Confidence            43321222344567777777875 77999999999999999999999999999999999999999999999999999999


Q ss_pred             Hhhhheeccc
Q 017940          318 GLYILLWGKN  327 (363)
Q Consensus       318 g~~l~~~~~~  327 (363)
                      |+.++....-
T Consensus       277 aL~l~~~d~l  286 (293)
T COG2962         277 ALALFSIDGL  286 (293)
T ss_pred             HHHHHHHHHH
Confidence            9999986544

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.90  E-value=1.3e-21  Score=165.67  Aligned_cols=275  Identities=16%  Similarity=0.143  Sum_probs=227.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHHHHH
Q 017940            9 PLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLTQY   88 (363)
Q Consensus         9 ~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   88 (363)
                      .++.++.++..-=...-+.|.... .+.+..++.+|..++.++++++..-++    .++++++++.....|+. ....|.
T Consensus        13 p~~~ll~amvsiq~Gas~Ak~LFP-~vG~~g~t~lRl~~aaLIll~l~RPwr----~r~~~~~~~~~~~yGvs-Lg~MNl   86 (292)
T COG5006          13 PILALLVAMVSIQSGASFAKSLFP-LVGAAGVTALRLAIAALILLALFRPWR----RRLSKPQRLALLAYGVS-LGGMNL   86 (292)
T ss_pred             cHHHHHHHHHHHHhhHHHHHHHcc-ccChhhHHHHHHHHHHHHHHHHhhHHH----hccChhhhHHHHHHHHH-HHHHHH
Confidence            578888888888888888998988 599999999999999999988864332    35788999999999988 689999


Q ss_pred             HHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCCcchhhhh
Q 017940           89 FFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETA  168 (363)
Q Consensus        89 ~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~~~~~~~~  168 (363)
                      +||.+++.+|.+.+..+..+.|+.+.+++.    +|  .++      .+.+.+++.|+.++.. .++             
T Consensus        87 ~FY~si~riPlGiAVAiEF~GPL~vA~~~s----Rr--~~d------~vwvaLAvlGi~lL~p-~~~-------------  140 (292)
T COG5006          87 LFYLSIERIPLGIAVAIEFTGPLAVALLSS----RR--LRD------FVWVALAVLGIWLLLP-LGQ-------------  140 (292)
T ss_pred             HHHHHHHhccchhhhhhhhccHHHHHHHhc----cc--hhh------HHHHHHHHHHHHhhee-ccC-------------
Confidence            999999999999999999999999877632    22  334      6777788899888874 221             


Q ss_pred             hhhhcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccc
Q 017940          169 INVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGK  248 (363)
Q Consensus       169 ~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (363)
                               +.......|..+++.++.||+.|.+..+|..+. .+.-+-....+..+.++.+|+.......    ...++
T Consensus       141 ---------~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~-~~g~~g~a~gm~vAaviv~Pig~~~ag~----~l~~p  206 (292)
T COG5006         141 ---------SVWSLDPVGVALALGAGACWALYIVLGQRAGRA-EHGTAGVAVGMLVAALIVLPIGAAQAGP----ALFSP  206 (292)
T ss_pred             ---------CcCcCCHHHHHHHHHHhHHHHHHHHHcchhccc-CCCchHHHHHHHHHHHHHhhhhhhhcch----hhcCh
Confidence                     122333499999999999999999999999865 3556778888888999998988754321    11233


Q ss_pred             hhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheecccc
Q 017940          249 IEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKNK  328 (363)
Q Consensus       249 ~~~~~~~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~  328 (363)
                      .....-+..+++++.+.|.+-..++++.++...+.+..++|.++.+.+++++||.+|..||+|+.+++.+..-..+..||
T Consensus       207 ~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~~  286 (292)
T COG5006         207 SLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTARK  286 (292)
T ss_pred             HHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccCC
Confidence            45666788999999999999999999999999999999999999999999999999999999999999998877765554


Q ss_pred             c
Q 017940          329 E  329 (363)
Q Consensus       329 ~  329 (363)
                      +
T Consensus       287 ~  287 (292)
T COG5006         287 P  287 (292)
T ss_pred             C
Confidence            4

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.90  E-value=5.1e-25  Score=187.31  Aligned_cols=291  Identities=19%  Similarity=0.172  Sum_probs=223.8

Q ss_pred             CChHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHH
Q 017940            5 NEWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTS   84 (363)
Q Consensus         5 ~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   84 (363)
                      +..+|.++..++ .++.+..+..+..++  .+|....-.|+++-.+..++..++++....  .+....+++++.|++| +
T Consensus        35 ~p~~gl~l~~vs-~ff~~~~vv~t~~~e--~~p~e~a~~r~l~~mlit~pcliy~~~~v~--gp~g~R~~LiLRg~mG-~  108 (346)
T KOG4510|consen   35 KPNLGLLLLTVS-YFFNSCMVVSTKVLE--NDPMELASFRLLVRMLITYPCLIYYMQPVI--GPEGKRKWLILRGFMG-F  108 (346)
T ss_pred             CCccCceehhhH-HHHhhHHHhhhhhhc--cChhHhhhhhhhhehhhhheEEEEEeeeee--cCCCcEEEEEeehhhh-h
Confidence            456788888888 555555555555555  889999999988888888877766443321  2233445678889887 7


Q ss_pred             HHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhc---CCCccCCC
Q 017940           85 LTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYK---GMPLFDHS  161 (363)
Q Consensus        85 ~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~---~~~~~~~~  161 (363)
                      .+..+.|+|++|.+.+++.+|..+.|+++.+++|.++|||.++.+      .++..+.+.|++++..+.   |++...  
T Consensus       109 tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~e------aL~s~itl~GVVLIvRPpFlFG~~t~g--  180 (346)
T KOG4510|consen  109 TGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFE------ALGSLITLLGVVLIVRPPFLFGDTTEG--  180 (346)
T ss_pred             hHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHH------HHHHHHhhheEEEEecCCcccCCCccc--
Confidence            777889999999999999999999999999999999999999999      999999999999987421   111100  


Q ss_pred             cchhhhhhhhhcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHHhcCCCc
Q 017940          162 YSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHS  241 (363)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (363)
                                 ++  .++.+....|...++.+.+..|...+..|+..|+. |......+...++.+..+......+.  -
T Consensus       181 -----------~~--~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk~~-h~~msvsyf~~i~lV~s~I~~~~ig~--~  244 (346)
T KOG4510|consen  181 -----------ED--SSQVEYDIPGTVAAISSVLFGASVYIILRYIGKNA-HAIMSVSYFSLITLVVSLIGCASIGA--V  244 (346)
T ss_pred             -----------cc--cccccccCCchHHHHHhHhhhhhHHHHHHHhhccc-cEEEEehHHHHHHHHHHHHHHhhccc--e
Confidence                       00  11124456788889999999999999999998884 55666666666666666555443331  1


Q ss_pred             ccccccchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhh
Q 017940          242 AWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYI  321 (363)
Q Consensus       242 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l  321 (363)
                      ++++ ...+|+.+..+|++ ++.++.+...++|+..|..+++..+++.++++++++++|+|.|+++.|+|+++++...+.
T Consensus       245 ~lP~-cgkdr~l~~~lGvf-gfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~  322 (346)
T KOG4510|consen  245 QLPH-CGKDRWLFVNLGVF-GFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVW  322 (346)
T ss_pred             ecCc-cccceEEEEEehhh-hhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHH
Confidence            2222 44678888888875 668999999999999999999999999999999999999999999999999999999887


Q ss_pred             heeccc
Q 017940          322 LLWGKN  327 (363)
Q Consensus       322 ~~~~~~  327 (363)
                      ....|.
T Consensus       323 ~a~~kw  328 (346)
T KOG4510|consen  323 VALKKW  328 (346)
T ss_pred             HHHHHH
Confidence            765443

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.89  E-value=2.9e-21  Score=176.06  Aligned_cols=279  Identities=15%  Similarity=0.109  Sum_probs=208.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHHHHH
Q 017940            9 PLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLTQY   88 (363)
Q Consensus         9 ~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   88 (363)
                      +++++++++++||...+..|+..  +.++.++.  |..++.+++..+....+..  ++.+++.+...++.|++ ...++.
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~~--g~~~~~~~--~~~~g~l~~~~~~~~~~~~--~~~~~~~~~~g~l~G~~-w~ig~~   74 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKIG--GGPYSQTL--GTTFGALILSIAIAIFVLP--EFWALSIFLVGLLSGAF-WALGQI   74 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhccC--CCHHHHHH--HHHHHHHHHHHHHHHHhCC--cccccHHHHHHHHHHHH-HHhhhh
Confidence            57899999999999999999764  58887775  6777777766655543221  12235666667777777 689999


Q ss_pred             HHHHHhhccCccchhhhcc-hhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCCcchhhh
Q 017940           89 FFLLGIQYTSATFACAFIN-MVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAET  167 (363)
Q Consensus        89 ~~~~al~~~~~~~~~ii~~-~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~~~~~~~  167 (363)
                      +++.+.++++.+.+..+.+ +.++++.+.+.+++||+.++++  ....++|+++++.|++++...++++.+         
T Consensus        75 ~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~--~~~~~~g~~l~l~G~~l~~~~~~~~~~---------  143 (290)
T TIGR00776        75 NQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQ--TLLGLLALILIIIGVYLTSRSKDKSAG---------  143 (290)
T ss_pred             hHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHH--HHHHHHHHHHHHHhHheEEeccccccc---------
Confidence            9999999999999999987 9999999999999999987653  122267789999998887643321110         


Q ss_pred             hhhhhcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHH---HHHHHHHHHHHHhcCCCcccc
Q 017940          168 AINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSL---FGAIQAAILCLATNRNHSAWS  244 (363)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  244 (363)
                               .++..+..+|+.++++++++|+.|.+..|+..   .+|....+.+..   .++++..+..   .++ .++ 
T Consensus       144 ---------~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~---~~~-~~~-  206 (290)
T TIGR00776       144 ---------IKSEFNFKKGILLLLMSTIGYLVYVVVAKAFG---VDGLSVLLPQAIGMVIGGIIFNLGH---ILA-KPL-  206 (290)
T ss_pred             ---------cccccchhhHHHHHHHHHHHHHHHHHHHHHcC---CCcceehhHHHHHHHHHHHHHHHHH---hcc-cch-
Confidence                     00012335799999999999999999999863   366777444444   3333222221   111 112 


Q ss_pred             cccchhHHHHHHHHHHHHHHHHHHhhhhcc-cCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhH----HHHHHHHHHh
Q 017940          245 FKGKIEIISVLYAGIVGSGLCYVGLTWCVK-KKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSL----LGSITVIIGL  319 (363)
Q Consensus       245 ~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~-~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~----~G~~li~~g~  319 (363)
                       .+...+..++ .|++ ..+++.+|..+.+ +.+++..+.+.+.+|+.+.++++++++|+.++.++    +|.++++.|+
T Consensus       207 -~~~~~~~~~~-~Gi~-~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~  283 (290)
T TIGR00776       207 -KKYAILLNIL-PGLM-WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAA  283 (290)
T ss_pred             -HHHHHHHHHH-HHHH-HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHH
Confidence             1223344444 8887 6899999999999 99999999999999999999999999999999999    9999999999


Q ss_pred             hhheec
Q 017940          320 YILLWG  325 (363)
Q Consensus       320 ~l~~~~  325 (363)
                      .+....
T Consensus       284 ~l~~~~  289 (290)
T TIGR00776       284 NILGIG  289 (290)
T ss_pred             HHHhcc
Confidence            887543

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.85  E-value=4.6e-19  Score=163.00  Aligned_cols=267  Identities=15%  Similarity=0.135  Sum_probs=211.5

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhcchhhHHHHH
Q 017940           36 NELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFV  115 (363)
Q Consensus        36 ~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~l  115 (363)
                      .|..+++.++....+...+.....+++   +.++..++.....+++ ..++..+.+.|++|+|.+...++.++.|+.+++
T Consensus        31 ~~~~lt~~q~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi  106 (303)
T PF08449_consen   31 FPLFLTFVQFAFNALFSFILLSLFKFP---KSRKIPLKKYAILSFL-FFLASVLSNAALKYISYPTQIVFKSSKPIPVMI  106 (303)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhcccc---CCCcChHHHHHHHHHH-HHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHH
Confidence            388999999999988887776554312   2334456666777777 588889999999999999999999999999999


Q ss_pred             HHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCCcchhhhhhhhhcCCCCCCCccchhhHHHHHHHHH
Q 017940          116 IALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIALTVGTL  195 (363)
Q Consensus       116 la~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~  195 (363)
                      ++.+++|+|.+.++      ++++++..+|+++....+..+.+.                .++...++..|+++.+++.+
T Consensus       107 ~~~l~~~k~y~~~~------~~~v~li~~Gv~~~~~~~~~~~~~----------------~~~~~~~~~~G~~ll~~sl~  164 (303)
T PF08449_consen  107 LGVLILGKRYSRRQ------YLSVLLITIGVAIFTLSDSSSSSS----------------SNSSSFSSALGIILLLLSLL  164 (303)
T ss_pred             HHHHhcCccccHHH------HHHHHHHHhhHheeeecccccccc----------------cccccccchhHHHHHHHHHH
Confidence            99999999999999      999999999999998754332210                01122223359999999999


Q ss_pred             HHHHHHHHHHhhhccCC-CchhHHHHHHHHHHHHHHHHHHH--hcCCCcc--cccccchhHHHHHHHHHHHHHHHHHHhh
Q 017940          196 LWASWFPIQSYIGKRYP-CKYSSTAILSLFGAIQAAILCLA--TNRNHSA--WSFKGKIEIISVLYAGIVGSGLCYVGLT  270 (363)
Q Consensus       196 ~~a~~~i~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~  270 (363)
                      +.|...+.+++..+++. ++.+.+++.+.++.+...+....  .++....  .....+..+..++...+ ++.+++...+
T Consensus       165 ~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~-~~~~g~~~i~  243 (303)
T PF08449_consen  165 LDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSL-TGALGQFFIF  243 (303)
T ss_pred             HHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHH-HHHHHHHHHH
Confidence            99999999999986544 67899999999999988887776  3321111  11122334444444443 5667788888


Q ss_pred             hhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheeccccc
Q 017940          271 WCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKNKE  329 (363)
Q Consensus       271 ~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~  329 (363)
                      ...++.++...+++..+..+++++++++++++++++.+|+|+++++.|..++.+.++|+
T Consensus       244 ~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~  302 (303)
T PF08449_consen  244 YLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK  302 (303)
T ss_pred             HHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence            89999999999999999999999999999999999999999999999999999877665

; GO: 0055085 transmembrane transport

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.82  E-value=3.1e-19  Score=159.38  Aligned_cols=232  Identities=13%  Similarity=0.149  Sum_probs=189.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhh
Q 017940           72 LFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTL  151 (363)
Q Consensus        72 ~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~  151 (363)
                      -+..+....+ -++.++.+..|+.+++++..+++.++.-+|+..++.++..||+++.+      ++++.+++.|++++..
T Consensus       159 ak~sl~fc~l-WF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sK------llav~~si~GViiVt~  231 (416)
T KOG2765|consen  159 AKLSLFFCPL-WFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSK------LLAVFVSIAGVIIVTM  231 (416)
T ss_pred             HHHHHHHHHH-HHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHH------HHHHHHhhccEEEEEe
Confidence            3444555666 58899999999999999999999999999999999999999999999      9999999999999987


Q ss_pred             hcCCCccCCCcchhhhhhhhhcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHH---HHHHHHHHH
Q 017940          152 YKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTA---ILSLFGAIQ  228 (363)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~---~~~~~~~~~  228 (363)
                      ++..+.+                  +..+.+...|+++++++++.||.|.++.||...+..+...+..   +..++..++
T Consensus       232 ~~s~~~~------------------~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnlll  293 (416)
T KOG2765|consen  232 GDSKQNS------------------DLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLL  293 (416)
T ss_pred             ccccccc------------------cCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHH
Confidence            5432211                  2235556799999999999999999999998876432233322   334455556


Q ss_pred             HHHHHHHhcC-CCcccccccchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchh
Q 017940          229 AAILCLATNR-NHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIG  307 (363)
Q Consensus       229 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~  307 (363)
                      ++|..++... ..+.+..++..+...+++.++++++++-.+|.+|.-.+++..+++-+.++...+++.+.++-+..+++.
T Consensus       294 lwP~l~iL~~~~~e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~  373 (416)
T KOG2765|consen  294 LWPPLIILDFFGEERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSAL  373 (416)
T ss_pred             HhHHHHHHHHhccCcccCCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHH
Confidence            6665554432 333455556667777888889999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHhhhheecccc
Q 017940          308 SLLGSITVIIGLYILLWGKNK  328 (363)
Q Consensus       308 ~~~G~~li~~g~~l~~~~~~~  328 (363)
                      +++|.+.|++|.+++++....
T Consensus       374 ~iiGsi~Ifv~Fv~vn~~~~~  394 (416)
T KOG2765|consen  374 YIIGSIPIFVGFVIVNISSEN  394 (416)
T ss_pred             HHHHHHHHHHHHhheeccccc
Confidence            999999999999999876543

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.77  E-value=2e-18  Score=155.76  Aligned_cols=273  Identities=13%  Similarity=0.090  Sum_probs=216.0

Q ss_pred             HHHHHHHhhc-CCC-hHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccc
Q 017940           24 NIFLKKVLEE-GMN-ELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATF  101 (363)
Q Consensus        24 ~~~~k~~~~~-~~~-~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~  101 (363)
                      .+..|+.++. +.+ |..++.++..++.+..+.....+.....+..++..+...+.+|++ .+++..+-+.++++++++.
T Consensus        33 ~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~-~~~~~v~~n~Sl~~v~VsF  111 (316)
T KOG1441|consen   33 IILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLV-FCISHVLGNVSLSYVPVSF  111 (316)
T ss_pred             EEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHH-HHHHHHhcchhhhccchhH
Confidence            3566777762 233 888888888888777776665543333332345678888889988 5999999999999999999


Q ss_pred             hhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCCcchhhhhhhhhcCCCCCCCc
Q 017940          102 ACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTE  181 (363)
Q Consensus       102 ~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (363)
                      ++.+..+.|++++++++++.+|+.+...      +..++..+.|+.+.+..+                          ..
T Consensus       112 ~q~iKa~~P~~tvl~~~~~~~~~~s~~~------~lsL~piv~GV~ias~~e--------------------------~~  159 (316)
T KOG1441|consen  112 YQTIKALMPPFTVLLSVLLLGKTYSSMT------YLSLLPIVFGVAIASVTE--------------------------LS  159 (316)
T ss_pred             HHHHHhhcchhHHHHHHHHhCCCCcceE------EEEEEEeeeeEEEeeecc--------------------------cc
Confidence            9999999999999999999999999999      999999999999998622                          22


Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHhhhcc---CCCchhHHHHHHHHHHHHHH-HHHHHhcCCCc---ccccccchhHHHH
Q 017940          182 RWTFGTIALTVGTLLWASWFPIQSYIGKR---YPCKYSSTAILSLFGAIQAA-ILCLATNRNHS---AWSFKGKIEIISV  254 (363)
Q Consensus       182 ~~~~G~~~~l~a~~~~a~~~i~~k~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~  254 (363)
                      -+..|.+.++.+.+..+..+++.|+..++   .-|+.+...+...++.+.++ |.....+++..   .....+ ......
T Consensus       160 fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~-~~~~~~  238 (316)
T KOG1441|consen  160 FNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWF-VTFLIL  238 (316)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccc-hhhHHH
Confidence            23499999999999999999999999842   23789999999999999999 77776665433   110001 112233


Q ss_pred             HHHHHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheecccccch
Q 017940          255 LYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKNKEMQ  331 (363)
Q Consensus       255 ~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~~~  331 (363)
                      .+.. ++........+..+.+++|.+.++.....-++.++.++++|+++.++.+..|.++.++|++++++.|.++++
T Consensus       239 ~~~s-v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~~  314 (316)
T KOG1441|consen  239 LLNS-VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEKK  314 (316)
T ss_pred             HHHH-HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhhc
Confidence            3333 334455566678999999999999999999999999999999999999999999999999999988876543

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.71  E-value=9.8e-17  Score=122.00  Aligned_cols=135  Identities=18%  Similarity=0.234  Sum_probs=122.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCC-CcCCHHHHHHHHHHHHHHHHHH
Q 017940            8 KPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSR-PKLTLRILFCLFFSAIVGTSLT   86 (363)
Q Consensus         8 ~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~   86 (363)
                      ..++++++++++||...++.|...+ ++||...+++|..+..+++..+....++... ...+.|.|.++.+.|+.+ .++
T Consensus         3 ~~~~~ALLsA~fa~L~~iF~KIGl~-~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~-gls   80 (140)
T COG2510           3 AAIIYALLSALFAGLTPIFAKIGLE-GVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAG-GLS   80 (140)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcc-ccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHH-HHH
Confidence            5789999999999999999999999 7999999999999999999888877644322 225889999999999775 999


Q ss_pred             HHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhh
Q 017940           87 QYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLT  150 (363)
Q Consensus        87 ~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~  150 (363)
                      +.+||.|++...++.+..+-.+.|+++.+++++++|||++.++      |+|+.+..+|+.+++
T Consensus        81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~------~iG~~LI~~Gailvs  138 (140)
T COG2510          81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPT------WIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHH------HHHHHHHHhCeeeEe
Confidence            9999999999999999999999999999999999999999999      999999999998875

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.70  E-value=1.2e-17  Score=141.66  Aligned_cols=285  Identities=16%  Similarity=0.135  Sum_probs=215.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCCC-hHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHHH
Q 017940            8 KPLIAMIAVEFGFATVNIFLKKVLEEGMN-ELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLT   86 (363)
Q Consensus         8 ~~~~~~l~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   86 (363)
                      +++.+.=+-.++-......+....+.+++ |...+|+.+..-+++..++..+++  +   .-...|+..++.+++. +-+
T Consensus        18 i~~~LGQiLSL~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~--~---~~~~~~~hYilla~~D-VEa   91 (336)
T KOG2766|consen   18 IGLGLGQILSLLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRR--K---YIKAKWRHYILLAFVD-VEA   91 (336)
T ss_pred             heeeHHHHHHHHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhh--H---HHHHHHHHhhheeEEe-ecc
Confidence            33333333344444445555555554555 888899999999999998888753  2   2234466688888885 778


Q ss_pred             HHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCCcchhh
Q 017940           87 QYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAE  166 (363)
Q Consensus        87 ~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~~~~~~  166 (363)
                      |++...|.||++...+.++-......+.+++|+++|.|.++.+      +.|+++|+.|+.++...|--. +.       
T Consensus        92 Ny~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmk------i~gV~iCi~GvvmvV~sDV~a-gd-------  157 (336)
T KOG2766|consen   92 NYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMK------ISGVVICIVGVVMVVFSDVHA-GD-------  157 (336)
T ss_pred             cEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhhe------eeeEEeEecceEEEEEeeecc-cc-------
Confidence            8889999999999999999999889999999999999999999      999999999999998654211 10       


Q ss_pred             hhhhhhcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccc
Q 017940          167 TAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFK  246 (363)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (363)
                                +.+..+..+|+.+.++++-+||+.++..+.+.|+ .|..+.+....+++++++..-.++.........+ 
T Consensus       158 ----------~aggsnp~~GD~lvi~GATlYaVSNv~EEflvkn-~d~~elm~~lgLfGaIIsaIQ~i~~~~~~~tl~w-  225 (336)
T KOG2766|consen  158 ----------RAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVKN-ADRVELMGFLGLFGAIISAIQFIFERHHVSTLHW-  225 (336)
T ss_pred             ----------ccCCCCCccCcEEEEecceeeeeccccHHHHHhc-CcHHHHHHHHHHHHHHHHHHHHhhhccceeeEee-
Confidence                      3345667799999999999999999999999999 4778899999999999988874443222222211 


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheecc
Q 017940          247 GKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGK  326 (363)
Q Consensus       247 ~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~  326 (363)
                       .......+. ..++.++-|.+....+|..+++..++-..+.-.++.++  -.||-+.++...+....+..|.+++..+.
T Consensus       226 -~~~i~~yl~-f~L~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~re  301 (336)
T KOG2766|consen  226 -DSAIFLYLR-FALTMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTRE  301 (336)
T ss_pred             -hHHHHHHHH-HHHHHHHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeeccc
Confidence             111222222 33456667777778899999999999999999999998  56888899999999999999999996544


Q ss_pred             cc
Q 017940          327 NK  328 (363)
Q Consensus       327 ~~  328 (363)
                      +.
T Consensus       302 ~~  303 (336)
T KOG2766|consen  302 KD  303 (336)
T ss_pred             cC
Confidence            43

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.69  E-value=1.1e-15  Score=128.40  Aligned_cols=269  Identities=13%  Similarity=0.087  Sum_probs=205.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhcchhhHHHHHH
Q 017940           37 ELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVI  116 (363)
Q Consensus        37 ~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~ll  116 (363)
                      ...++|+++....++.-++..++++.   +.|+-.-+.....+ ..+.+.+...+.|+||+|-....+-.++-|+=++++
T Consensus        53 alaLVf~qC~~N~vfAkvl~~ir~~~---~~D~t~~~~YaAcs-~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMil  128 (337)
T KOG1580|consen   53 ALALVFFQCTANTVFAKVLFLIRKKT---EIDNTPTKMYAACS-ASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMIL  128 (337)
T ss_pred             HHHHHHHHHHHHHHHHHhheeecccc---cccCCcchHHHHHH-HHHHHHHHhccchhcccCCcHHHhcccCCCcceeee
Confidence            56777888888877776555543322   23333333333333 336677777789999999999888899999999999


Q ss_pred             HHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCCcchhhhhhhhhcCCCCCCCccchhhHHHHHHHHHH
Q 017940          117 ALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIALTVGTLL  196 (363)
Q Consensus       117 a~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~  196 (363)
                      ++++.|.+.++++      ...+++++.|+++..+.++...                   +-.+.....|.++.+++-..
T Consensus       129 GVl~~~KsY~w~k------Y~cVL~IV~GValFmYK~~Kv~-------------------g~e~~t~g~GElLL~lSL~m  183 (337)
T KOG1580|consen  129 GVLFAHKSYHWRK------YCCVLMIVVGVALFMYKENKVG-------------------GAEDKTFGFGELLLILSLAM  183 (337)
T ss_pred             ehhhhcccccHHH------HHHHHHHHHHHHHhhccccccC-------------------CCcccccchHHHHHHHHHHh
Confidence            9999999999999      9999999999999997543322                   22345556899999999999


Q ss_pred             HHHHHHHHHhhhccCC-CchhHHHHHHHHHHHHHHHHHHHhcCCCcc--cccccchhHHHHHHHHHHHHHHHHHHhhhhc
Q 017940          197 WASWFPIQSYIGKRYP-CKYSSTAILSLFGAIQAAILCLATNRNHSA--WSFKGKIEIISVLYAGIVGSGLCYVGLTWCV  273 (363)
Q Consensus       197 ~a~~~i~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~  273 (363)
                      -+.....+.|..+++. ..-..+++.++.+.+.+....++.++-+..  +..-.+..|+.+..+++ ++.+++++.+.-+
T Consensus       184 DGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai-~s~LGQ~fIF~tv  262 (337)
T KOG1580|consen  184 DGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAI-ASCLGQWFIFKTV  262 (337)
T ss_pred             cccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHH-HHHhhhHHHHHHH
Confidence            9999988888876543 446778888888888777776665542221  11223456777777776 5789999999999


Q ss_pred             ccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheecccccchhccc
Q 017940          274 KKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKNKEMQNCVS  335 (363)
Q Consensus       274 ~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~~~~~~~  335 (363)
                      ...+|..-+++..+.-+++++.++++++.+++.+||+|..+++.|...=....++......+
T Consensus       263 ~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~GK~a~~t~ak  324 (337)
T KOG1580|consen  263 EEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVDGKKAPMTAAK  324 (337)
T ss_pred             HHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhcCCcCcccccc
Confidence            99999999999999999999999999999999999999999999988766555444333333

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.66  E-value=2.5e-13  Score=122.04  Aligned_cols=299  Identities=12%  Similarity=0.079  Sum_probs=212.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcC---CChHHHHHHHHHHHHHHHHHHHHhhccC---CC-Cc------CCHHHHHH
Q 017940            8 KPLIAMIAVEFGFATVNIFLKKVLEEG---MNELVFITCRLLVATILLAPIGYFWERN---SR-PK------LTLRILFC   74 (363)
Q Consensus         8 ~~~~~~l~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~r~~~~~i~l~~~~~~~~~~---~~-~~------~~~~~~~~   74 (363)
                      .-.+.++...+.++......|+.-..+   +.|.+.+++--..-.++.....+...+.   +. +.      ..+++...
T Consensus        15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk   94 (345)
T KOG2234|consen   15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK   94 (345)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence            567778888899999999999876654   5577777777776666666665554211   11 11      13445566


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcC
Q 017940           75 LFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKG  154 (363)
Q Consensus        75 ~~~~g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~  154 (363)
                      ..+-+++ +.+.|.+++.++.+.+++..++..++-.+.|+++..+++|+|++++|      |.++++.+.|+.++..+..
T Consensus        95 ~~vPa~i-YalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Q------w~Al~lL~~Gv~~vQ~~~~  167 (345)
T KOG2234|consen   95 VSVPALI-YALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQ------WMALVLLFAGVALVQLPSL  167 (345)
T ss_pred             HHHHHHH-HHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHH------HHHHHHHHHHHHHHhccCC
Confidence            6666777 78889999999999999999999999999999999999999999999      9999999999999984322


Q ss_pred             CCccCCCcchhhhhhhhhcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhccCCCchhH-HHHHHHHHHHHHHHHH
Q 017940          155 MPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSS-TAILSLFGAIQAAILC  233 (363)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  233 (363)
                      ...+.               +......+...|....+.++.+-+...++.++..|+...+... +....+++.++.+...
T Consensus       168 ~~~~a---------------~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~  232 (345)
T KOG2234|consen  168 SPTGA---------------KSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTI  232 (345)
T ss_pred             CCCCc---------------cCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHH
Confidence            21110               0022356667999999999999999999999999874433333 3333444444444433


Q ss_pred             HHhcCCCcccccccchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHH
Q 017940          234 LATNRNHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSI  313 (363)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~  313 (363)
                      +..+.+...+.- --..|-...+.-++..+++-.+...-+|+.+-..=+....+..+++.+.++.+++-++|....+|..
T Consensus       233 ~~~d~~~i~~~g-ff~G~s~~vw~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~  311 (345)
T KOG2234|consen  233 LLQDGEAINEYG-FFYGYSSIVWLVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGAL  311 (345)
T ss_pred             hhccccccccCC-ccccccHHHHHHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHH
Confidence            333222211110 0011222222223344455555556678888777778888899999999999999999999999999


Q ss_pred             HHHHHhhhheeccccc
Q 017940          314 TVIIGLYILLWGKNKE  329 (363)
Q Consensus       314 li~~g~~l~~~~~~~~  329 (363)
                      +++..+.++...+.++
T Consensus       312 lVi~Si~lY~~~P~~~  327 (345)
T KOG2234|consen  312 LVILSIFLYSLYPARD  327 (345)
T ss_pred             HHHHHHHHhhcCCccc
Confidence            9999999999555544

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.61  E-value=3.5e-14  Score=124.11  Aligned_cols=265  Identities=12%  Similarity=0.130  Sum_probs=210.5

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhcchhhHHHHH
Q 017940           36 NELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFV  115 (363)
Q Consensus        36 ~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~l  115 (363)
                      ++..+.+.+.+++.++-..+..++..+   ....+.|......++.+ .++..|.+.|++|++--...+-.++-.+-+++
T Consensus        50 ~~~fL~~~q~l~~~~~s~~~l~~~k~~---~~~~apl~~y~~is~tn-~~s~~~~yeaLKyvSyPtq~LaKscKmIPVml  125 (327)
T KOG1581|consen   50 HSLFLVFCQRLVALLVSYAMLKWWKKE---LSGVAPLYKYSLISFTN-TLSSWCGYEALKYVSYPTQTLAKSCKMIPVML  125 (327)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhccccc---CCCCCchhHHhHHHHHh-hcchHHHHHHHHhccchHHHHHHHhhhhHHHH
Confidence            488889999999988886665443322   22344466666677664 78888999999999999988888888888889


Q ss_pred             HHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCCcchhhhhhhhhcCCCCCCCccchhhHHHHHHHHH
Q 017940          116 IALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIALTVGTL  195 (363)
Q Consensus       116 la~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~  195 (363)
                      .+.++.|.|.+..+      .+...++-.|+.+.+..+..+..                 .+.++++...|+.+....-+
T Consensus       126 mg~Lvy~~ky~~~e------Yl~~~LIs~GvsiF~l~~~s~s~-----------------~~~g~~ns~~G~~Ll~~~L~  182 (327)
T KOG1581|consen  126 MGTLVYGRKYSSFE------YLVAFLISLGVSIFSLFPNSDSS-----------------SKSGRENSPIGILLLFGYLL  182 (327)
T ss_pred             HHHHHhcCccCcHH------HHHHHHHHhheeeEEEecCCCCc-----------------cccCCCCchHhHHHHHHHHH
Confidence            99999999999999      99999999999988765433211                 14455677799999999999


Q ss_pred             HHHHHHHHHHhhhccCC-CchhHHHHHHHHHHHHHHHHHHHhcCCCc--ccccccchhHHHHHHHHHHHHHHHHHHhhhh
Q 017940          196 LWASWFPIQSYIGKRYP-CKYSSTAILSLFGAIQAAILCLATNRNHS--AWSFKGKIEIISVLYAGIVGSGLCYVGLTWC  272 (363)
Q Consensus       196 ~~a~~~i~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a  272 (363)
                      .-+..+..++++.++.. +++.++++.+++..+......+..+...+  .+...++..+.-++.... ++.+++.+.++-
T Consensus       183 fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~-~gavGQ~FI~~T  261 (327)
T KOG1581|consen  183 FDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYST-CGAVGQLFIFYT  261 (327)
T ss_pred             HHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHH-hhhhhhheehhh
Confidence            99999999999987643 77899999999999888776443333222  222224455666666665 456899999999


Q ss_pred             cccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheecccc
Q 017940          273 VKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKNK  328 (363)
Q Consensus       273 ~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~  328 (363)
                      +++-++...+.++.+.-+++++++.+.++.+++..||+|..+++.|+.+-..-++|
T Consensus       262 I~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~  317 (327)
T KOG1581|consen  262 IERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK  317 (327)
T ss_pred             HhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999988766655

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.60  E-value=3.4e-13  Score=119.46  Aligned_cols=285  Identities=13%  Similarity=0.133  Sum_probs=218.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCCC-hHHH--HHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHH
Q 017940            8 KPLIAMIAVEFGFATVNIFLKKVLEEGMN-ELVF--ITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTS   84 (363)
Q Consensus         8 ~~~~~~l~~~~~~~~~~~~~k~~~~~~~~-~~~~--~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   84 (363)
                      .....++.-++.--...+..|..+.. .+ |..+  ...+.+.+.+.+...-..+.- +.++++++..+..+...++ +.
T Consensus        12 ~~l~sa~~Y~~sS~lm~vvNK~vls~-y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv-~~~~l~~~~~kk~~P~~~l-f~   88 (314)
T KOG1444|consen   12 SPLLSALFYCLSSILMTVVNKIVLSS-YNFPMGLLLMLLQSLASVLVVLVLKRLGLV-NFRPLDLRTAKKWFPVSLL-FV   88 (314)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhc-CCCcHHHHHHHHHHHHHHHHHHHHHHhcee-ecCCcChHHHHHHccHHHH-HH
Confidence            34555555555556666777877763 33 4444  448888888777655433222 3455889999999999988 57


Q ss_pred             HHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCCcch
Q 017940           85 LTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQ  164 (363)
Q Consensus        85 ~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~~~~  164 (363)
                      +....-..+++|++....+++.+..|+++++.+.+++|.|++...      +.++...++|.......+           
T Consensus        89 ~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v------~~Sv~~m~~~s~~~~~~d-----------  151 (314)
T KOG1444|consen   89 GMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKV------WASVFAMIIGSVAAAFTD-----------  151 (314)
T ss_pred             HHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhH------HHHHHHHHHHHHhhcccc-----------
Confidence            888888899999999999999999999999999999998888887      888888888877665422           


Q ss_pred             hhhhhhhhcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhccCC-CchhHHHHHHHHHHHHHHHHHHHhcC-C---
Q 017940          165 AETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYP-CKYSSTAILSLFGAIQAAILCLATNR-N---  239 (363)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~---  239 (363)
                                     ..-...|+.|++...++-+.+.+..|+..+... +.+..+++.++.+........++.++ +   
T Consensus       152 ---------------~sf~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~  216 (314)
T KOG1444|consen  152 ---------------LSFNLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALS  216 (314)
T ss_pred             ---------------ceecchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHH
Confidence                           111225899999999999999999999876532 45778899999998888887777654 1   


Q ss_pred             --CcccccccchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHH
Q 017940          240 --HSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVII  317 (363)
Q Consensus       240 --~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~  317 (363)
                        .+.+.  ....+..+...++++.++.|..+ ++.+..++...+++...+-..+.+.+.++.|++.++...+|..+-++
T Consensus       217 ~~~~~~~--~~~~~~~~~lScv~gf~isy~s~-~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~  293 (314)
T KOG1444|consen  217 LNFDNWS--DSSVLVVMLLSCVMGFGISYTSF-LCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFF  293 (314)
T ss_pred             hhccccc--chhHHHHHHHHHHHHHHHHHHHH-HHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhh
Confidence              11121  23346667777777666666655 78999999999999988888888888888899999999999999999


Q ss_pred             Hhhhheecccccc
Q 017940          318 GLYILLWGKNKEM  330 (363)
Q Consensus       318 g~~l~~~~~~~~~  330 (363)
                      |-+++++.+.+++
T Consensus       294 ggv~Y~~~~~~~k  306 (314)
T KOG1444|consen  294 GGVLYSYATFRKK  306 (314)
T ss_pred             hhhHHhhhhhhhc
Confidence            9999998775543

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.59  E-value=1e-13  Score=122.57  Aligned_cols=231  Identities=13%  Similarity=0.114  Sum_probs=169.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhH
Q 017940           67 LTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGA  146 (363)
Q Consensus        67 ~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv  146 (363)
                      .++++...+.+-+++ +.+.+.+.+.++++++++..+++.++..+++++++++++|+|++.+|      |.++.+.+.|+
T Consensus        12 ~~~~~~~~~~vPA~l-Y~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~q------W~aL~lL~~Gv   84 (244)
T PF04142_consen   12 KSPKDTLKLAVPALL-YAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQ------WLALFLLVAGV   84 (244)
T ss_pred             HhHHHHHHHHHHHHH-HHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhh------HHHHHHHHHHH
Confidence            356778888888888 79999999999999999999999999999999999999999999999      99999999999


Q ss_pred             HHhhhhcCCCccCCCcchhhhhhhhhcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhccCC-CchhHHHHHHHHH
Q 017940          147 MLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYP-CKYSSTAILSLFG  225 (363)
Q Consensus       147 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~-~~~~~~~~~~~~~  225 (363)
                      .++........+.++         ....+++....+...|.+..++++++-+...++.++..|+.. +.+..+......+
T Consensus        85 ~lv~~~~~~~~~~~~---------~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~g  155 (244)
T PF04142_consen   85 VLVQLSSSQSSDNSS---------SSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFG  155 (244)
T ss_pred             heeecCCcccccccc---------ccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHH
Confidence            998754322211000         000000112344578999999999999999999999998854 3344455555566


Q ss_pred             HHHHHHHHHHhcCCC-cccccccchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCC
Q 017940          226 AIQAAILCLATNRNH-SAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERL  304 (363)
Q Consensus       226 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~  304 (363)
                      .+..++.....+.+. .+....  ..+-...+.-++...++-.+....+|+.+...=+....+..+++.++++++|+.++
T Consensus       156 i~~~~~~~~~~~~~~~~~~g~f--~G~~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~  233 (244)
T PF04142_consen  156 ILFNLLALLLSDGSAISESGFF--HGYSWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPP  233 (244)
T ss_pred             HHHHHHHHhcccccccccCCch--hhcchHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence            655555544332211 111100  11111222333445556666777899999999999999999999999999999999


Q ss_pred             chhhHHHHHHH
Q 017940          305 HIGSLLGSITV  315 (363)
Q Consensus       305 ~~~~~~G~~li  315 (363)
                      +....+|+.++
T Consensus       234 s~~f~lg~~~V  244 (244)
T PF04142_consen  234 SLSFLLGAALV  244 (244)
T ss_pred             chHHhhheecC
Confidence            99999998753

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.57  E-value=6.3e-13  Score=116.23  Aligned_cols=256  Identities=16%  Similarity=0.160  Sum_probs=186.7

Q ss_pred             CC-hHHHHHHHHHHHHHHHHHHHHhhccCC---CCcCCHHHHH-HHHHHHHHHHHHHHHHHHHHhhccCccchhhhcchh
Q 017940           35 MN-ELVFITCRLLVATILLAPIGYFWERNS---RPKLTLRILF-CLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMV  109 (363)
Q Consensus        35 ~~-~~~~~~~r~~~~~i~l~~~~~~~~~~~---~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~  109 (363)
                      ++ |+.++.++.++-..+....-...+++.   +...+|++.. +....|+. .+....+-+.+++|++.+..++..+..
T Consensus        42 f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtala-ta~DIGLSN~sl~yVtlSlYTM~KSSs  120 (349)
T KOG1443|consen   42 FHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALA-TALDIGLSNWSLEYVTLSLYTMTKSSS  120 (349)
T ss_pred             cCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhh-hhcccccccceeeeeeeeeeeeccccH
Confidence            44 888888887777666655544433322   2346777754 45566666 488888889999999999999999999


Q ss_pred             hHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCCcchhhhhhhhhcCCCCCCCccchhhHHH
Q 017940          110 PVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIA  189 (363)
Q Consensus       110 pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~  189 (363)
                      ++|+.+++.+|.-||+++.-      ..-+.++.+|++++.+ +.                         ++-...|..+
T Consensus       121 i~FIllFs~if~lEk~~w~L------~l~v~lI~~Glflft~-Ks-------------------------Tqf~i~Gf~l  168 (349)
T KOG1443|consen  121 ILFILLFSLIFKLEKFRWAL------VLIVLLIAVGLFLFTY-KS-------------------------TQFNIEGFFL  168 (349)
T ss_pred             HHHHHHHHHHHHhHHHHHHH------HHHHHHHhhheeEEEe-cc-------------------------cceeehhHHH
Confidence            99999999999999999876      6666677777877775 22                         2233488888


Q ss_pred             HHHHHHHHHHHHHHHHhhhccC----CCchhHHHHHHHHHHHHHHHHHHHhcCCCcc-----cccccc-hhHHHH---HH
Q 017940          190 LTVGTLLWASWFPIQSYIGKRY----PCKYSSTAILSLFGAIQAAILCLATNRNHSA-----WSFKGK-IEIISV---LY  256 (363)
Q Consensus       190 ~l~a~~~~a~~~i~~k~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-~~~~~~---~~  256 (363)
                      ..+++.+-++--...+.+.++.    ++|....+.......+.++|..+..|+....     +...+. ..+..+   ..
T Consensus       169 v~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l  248 (349)
T KOG1443|consen  169 VLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISL  248 (349)
T ss_pred             HHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHH
Confidence            8888888777776666665542    3788888888888888888888887763222     111111 122222   22


Q ss_pred             HHHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhhee
Q 017940          257 AGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLW  324 (363)
Q Consensus       257 ~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~  324 (363)
                      .|.++....+. -+..+.+++....++.....-+.+.+++.++.+|.++...|+|..+...|+.+..+
T Consensus       249 ~g~laF~l~~s-EflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~~  315 (349)
T KOG1443|consen  249 GGLLAFLLEFS-EFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHRN  315 (349)
T ss_pred             HHHHHHHHHHH-HHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhcc
Confidence            23322222222 23567888999999999999999999999999999999999999999999999844

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.55  E-value=1.7e-14  Score=114.61  Aligned_cols=125  Identities=25%  Similarity=0.442  Sum_probs=111.8

Q ss_pred             HHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 017940           18 FGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYT   97 (363)
Q Consensus        18 ~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~   97 (363)
                      ++||...++.|...+ +.||...+++|+..+.+ ++++....+++...+.+++++......|+++...++.+++.+++++
T Consensus         1 ~~~a~~~~~~k~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~   78 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLK-KISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYI   78 (126)
T ss_pred             ceeeeHHHHHHHHhc-cCCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhc
Confidence            479999999999988 49999999999999998 6666655555444567888899999999887799999999999999


Q ss_pred             CccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhh
Q 017940           98 SATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLT  150 (363)
Q Consensus        98 ~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~  150 (363)
                      +++.++++.++.|+++.+++++++||++++++      ++|+++++.|+.++.
T Consensus        79 ~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~------~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   79 SASIVSILQYLSPVFAAILGWLFLGERPSWRQ------IIGIILIIIGVVLIS  125 (126)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999      999999999998875

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.54  E-value=3.1e-14  Score=122.31  Aligned_cols=267  Identities=16%  Similarity=0.095  Sum_probs=202.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhccCC----C--CcCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhcchhh
Q 017940           37 ELVFITCRLLVATILLAPIGYFWERNS----R--PKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVP  110 (363)
Q Consensus        37 ~~~~~~~r~~~~~i~l~~~~~~~~~~~----~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~p  110 (363)
                      |..+++.++++...+...+.....+-.    .  .++|.+..+...-..++ ..+...+-+.+++|++.+...+=.++..
T Consensus        61 plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvV-fi~mI~fnnlcL~yVgVaFYyvgRsLtt  139 (347)
T KOG1442|consen   61 PLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVV-FILMISFNNLCLKYVGVAFYYVGRSLTT  139 (347)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhhe-eeeehhccceehhhcceEEEEeccchhh
Confidence            888999999888777666554432211    1  12455555555555555 3555566679999999999999999999


Q ss_pred             HHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCCcchhhhhhhhhcCCCCCCCccchhhHHHH
Q 017940          111 VITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIAL  190 (363)
Q Consensus       111 v~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~  190 (363)
                      +|++++..+++|+|-+..-      ..++.+++.|..+=...++                      .. +.-...|.+++
T Consensus       140 vFtVlLtyvllkqkTs~~~------~~~C~lIi~GF~lGvdqE~----------------------~~-~~ls~~GvifG  190 (347)
T KOG1442|consen  140 VFTVLLTYVLLKQKTSFFA------LGCCLLIILGFGLGVDQEG----------------------ST-GTLSWIGVIFG  190 (347)
T ss_pred             hHHHHhHHhhccccccccc------ceeehhheehheecccccc----------------------cc-CccchhhhHHH
Confidence            9999999999999999887      8888888777766543222                      11 22334899999


Q ss_pred             HHHHHHHHHHHHHHHhhhccCC-CchhHHHHHHHHHHHHHHHHHHHhcCCCcccc--cc-cchhHHHHHHHHHHHHHHHH
Q 017940          191 TVGTLLWASWFPIQSYIGKRYP-CKYSSTAILSLFGAIQAAILCLATNRNHSAWS--FK-GKIEIISVLYAGIVGSGLCY  266 (363)
Q Consensus       191 l~a~~~~a~~~i~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~g~~~~~~~~  266 (363)
                      +.++++-|+..+..|+...... .-+.++++.+..+.++++|...+.++-...+.  .. ....|..+...|+++..++|
T Consensus       191 VlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~mgy  270 (347)
T KOG1442|consen  191 VLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAMGY  270 (347)
T ss_pred             HHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHhhh
Confidence            9999999999999998765433 45778899999999999999988765212121  21 33456666667776655555


Q ss_pred             HHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheecccccchhcc
Q 017940          267 VGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKNKEMQNCV  334 (363)
Q Consensus       267 ~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~~~~~~  334 (363)
                      .. .+-+|.++|.+.++-..-.-....+++..+++|.-+..-|-|-+++++|...+++.|.++++++.
T Consensus       271 vT-g~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~~~  337 (347)
T KOG1442|consen  271 VT-GWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRKAS  337 (347)
T ss_pred             ee-eEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHhhc
Confidence            53 36689999999999999999999999999999999999999999999999999998877665543

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.51  E-value=3.5e-13  Score=102.78  Aligned_cols=136  Identities=18%  Similarity=0.168  Sum_probs=116.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhHHHHHHHHHHHHHHH
Q 017940          186 GTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGLC  265 (363)
Q Consensus       186 G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  265 (363)
                      -.++++++++++++..+..|--.++ .||...+..+.....+.+.......++ .......++..|..+...| ++++.+
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~~-vdp~~At~IRtiVi~~~l~~v~~~~g~-~~~~~~~~~k~~lflilSG-la~gls   80 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLEG-VDPDFATTIRTIVILIFLLIVLLVTGN-WQAGGEIGPKSWLFLILSG-LAGGLS   80 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccc-cCccHHHHHHHHHHHHHHHHHHHhcCc-eecccccCcceehhhhHHH-HHHHHH
Confidence            3589999999999999999998887 478889999999888887777766554 2211112556777777777 578899


Q ss_pred             HHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhhee
Q 017940          266 YVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLW  324 (363)
Q Consensus       266 ~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~  324 (363)
                      ..+|++|++...++++.++.-+.|+++++++++++||+++..+++|+.++.+|.+++.+
T Consensus        81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            99999999999999999999999999999999999999999999999999999988754

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.44  E-value=6.1e-13  Score=105.66  Aligned_cols=125  Identities=22%  Similarity=0.328  Sum_probs=107.8

Q ss_pred             HHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhHHHHHHHHHHHHHHHHHHhhhhcc
Q 017940          195 LLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVK  274 (363)
Q Consensus       195 ~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~  274 (363)
                      ++||.+.+..|+..++ .||.....+++..+.+ .++.....++..  ....+...+...++.+++++..++.+++++++
T Consensus         1 ~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~   76 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKK-ISPLSITFWRFLIAGI-LLILLLILGRKP--FKNLSPRQWLWLLFLGLLGTALAYLLYFYALK   76 (126)
T ss_pred             ceeeeHHHHHHHHhcc-CCHHHHHHHHHHHHHH-HHHHHHhhcccc--ccCCChhhhhhhhHhhccceehHHHHHHHHHH
Confidence            4789999999999998 5789999999999998 666666655432  12224456777888888888999999999999


Q ss_pred             cCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhhe
Q 017940          275 KKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILL  323 (363)
Q Consensus       275 ~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~  323 (363)
                      +.+++.++++..++|+++.++++++++|+++..+++|+++++.|+++..
T Consensus        77 ~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   77 YISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999998764

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=99.39  E-value=2.2e-10  Score=101.12  Aligned_cols=254  Identities=15%  Similarity=0.112  Sum_probs=175.4

Q ss_pred             CChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhc-chhhHHH
Q 017940           35 MNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFI-NMVPVIT  113 (363)
Q Consensus        35 ~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~ii~-~~~pv~~  113 (363)
                      -+|..-.+---.-+.++-+....+. +... ..+.+.+...++.|++ ..+++.+.+.++++.+.+.+..+. .++-+.+
T Consensus        10 G~~~~Q~lG~t~Gali~alv~~~~~-~p~~-~~~~~~~~~~~lsG~~-W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~   86 (269)
T PF06800_consen   10 GKPANQILGTTIGALIFALVVFLFR-QPAF-SMSGTSFIVAFLSGAF-WAIGQIGQFKSFKKIGVSKTMPISTGLQLVGT   86 (269)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHh-CCCc-chHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcceeeeccchhHHHHHH
Confidence            3444444443344444444443332 2211 1234889999999998 599999999999999999999995 6999999


Q ss_pred             HHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCCcchhhhhhhhhcCCCCCCCccchhhHHHHHHH
Q 017940          114 FVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIALTVG  193 (363)
Q Consensus       114 ~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a  193 (363)
                      .+++.++++|.-+..+  ...-.+++++.++|+.+.+..+.++..                  .+++.+...|....+++
T Consensus        87 sl~gv~~fgEW~~~~~--~~~G~~Al~liiiGv~lts~~~~~~~~------------------~~~~~~~~kgi~~Ll~s  146 (269)
T PF06800_consen   87 SLIGVLFFGEWTTTTQ--KIIGFLALVLIIIGVILTSYQDKKSDK------------------SSSKSNMKKGILALLIS  146 (269)
T ss_pred             HHHHHhhcCCCCCcch--HHHHHHHHHHHHHHHHHhccccccccc------------------cccccchhhHHHHHHHH
Confidence            9999999999877665  000123677888899888875433221                  12245567899999999


Q ss_pred             HHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhHHHHHHHHHHHHHHHHHHhhhhc
Q 017940          194 TLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCV  273 (363)
Q Consensus       194 ~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~  273 (363)
                      .+.|..|.+..|...   .+++....-+.....+....+....++  ..+   .+..|.. +..|++ -.++.+++..+.
T Consensus       147 tigy~~Y~~~~~~~~---~~~~~~~lPqaiGm~i~a~i~~~~~~~--~~~---~k~~~~n-il~G~~-w~ignl~~~is~  216 (269)
T PF06800_consen  147 TIGYWIYSVIPKAFH---VSGWSAFLPQAIGMLIGAFIFNLFSKK--PFF---EKKSWKN-ILTGLI-WGIGNLFYLISA  216 (269)
T ss_pred             HHHHHHHHHHHHhcC---CChhHhHHHHHHHHHHHHHHHhhcccc--ccc---ccchHHh-hHHHHH-HHHHHHHHHHhH
Confidence            999999999977633   256666665555444444333333311  111   2223433 334443 356888888999


Q ss_pred             ccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhH----HHHHHHHHHhhh
Q 017940          274 KKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSL----LGSITVIIGLYI  321 (363)
Q Consensus       274 ~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~----~G~~li~~g~~l  321 (363)
                      ++.+.+..=.+..+.++++.+.+.+++||+=+.+++    +|.+++++|.++
T Consensus       217 ~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  217 QKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL  268 (269)
T ss_pred             HhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence            999999999999999999999999999999876654    588888888664

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.33  E-value=2.7e-11  Score=101.30  Aligned_cols=276  Identities=14%  Similarity=0.135  Sum_probs=195.1

Q ss_pred             HHHHHHhh-cCCC-hHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccch
Q 017940           25 IFLKKVLE-EGMN-ELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFA  102 (363)
Q Consensus        25 ~~~k~~~~-~~~~-~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~  102 (363)
                      +..|+.+. .|.+ -+.+++.+.+++.+.+..+-..+.-+    .+..+.+..+...++ .....+.--.+++|++....
T Consensus        23 ltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~----fR~t~aK~WfpiSfL-Lv~MIyt~SKsLqyL~vpiY   97 (309)
T COG5070          23 LTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVE----FRLTKAKKWFPISFL-LVVMIYTSSKSLQYLAVPIY   97 (309)
T ss_pred             HhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhh----eehhhhhhhcCHHHH-HHHHHHhcccceeeeeeeHH
Confidence            34455443 1333 46677888888877766554332111    112223333444444 34555556799999999999


Q ss_pred             hhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCCcchhhhhhhhhcCCCCCCCcc
Q 017940          103 CAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTER  182 (363)
Q Consensus       103 ~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (363)
                      +++.++..+.++....++++.|++...      ..+.++.+..-....+.|.+..                   .-....
T Consensus        98 TiFKNltII~iAygEvl~Fgg~vtsl~------l~SFilMvlSS~va~w~D~q~~-------------------~~~~~~  152 (309)
T COG5070          98 TIFKNLTIILIAYGEVLFFGGRVTSLE------LLSFILMVLSSVVATWGDQQAS-------------------AFKAQI  152 (309)
T ss_pred             HHhccceeehhHhhHHHHhcCccchhh------HHHHHHHHHHHHHhccchhhHH-------------------HHHhcc
Confidence            999999999999999999999999888      7777776666666655332211                   111234


Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHhhhccCC-CchhHHHHHHHHHHHHHHHHHHHhcCCCcc-ccc-ccchhHHHHHHHHH
Q 017940          183 WTFGTIALTVGTLLWASWFPIQSYIGKRYP-CKYSSTAILSLFGAIQAAILCLATNRNHSA-WSF-KGKIEIISVLYAGI  259 (363)
Q Consensus       183 ~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~g~  259 (363)
                      .+.|++|....++.-+.+....|+..+-.. .....++|.++.+..+++.+.+..|+..+. ... .+.....++...|+
T Consensus       153 lN~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl  232 (309)
T COG5070         153 LNPGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGL  232 (309)
T ss_pred             cCCceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHH
Confidence            458999999999999999999888765311 237889999999999999988887652111 111 12223445666666


Q ss_pred             HHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheecccccch
Q 017940          260 VGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKNKEMQ  331 (363)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~~~  331 (363)
                      .+.+.+| +-.|.++.++.+..+++..++-.-..+.|.++++|+.+...+..+.+-.....++...+.++++
T Consensus       233 ~svgiSy-~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~q  303 (309)
T COG5070         233 CSVGISY-CSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQQ  303 (309)
T ss_pred             HHhhhhh-ccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            5544444 4668999999999999999999999999999999999999999999999888888776655433

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.32  E-value=3.9e-11  Score=103.72  Aligned_cols=279  Identities=14%  Similarity=0.142  Sum_probs=190.4

Q ss_pred             HHHHHHHHHHhh---cCCC----hHHHHHHHHHHHHHHHHHHHHhhccCCCCcC-------------CHHHHHHHHHHHH
Q 017940           21 ATVNIFLKKVLE---EGMN----ELVFITCRLLVATILLAPIGYFWERNSRPKL-------------TLRILFCLFFSAI   80 (363)
Q Consensus        21 ~~~~~~~k~~~~---~~~~----~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~-------------~~~~~~~~~~~g~   80 (363)
                      ..+.+..|++=+   +|.+    |+..+..-++.-+.++..+.+++.+...+..             +.+ -...+.-.+
T Consensus        16 s~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~-p~lfl~Pal   94 (372)
T KOG3912|consen   16 SFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFN-PVLFLPPAL   94 (372)
T ss_pred             cHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCC-cceecChHH
Confidence            345566666421   2333    6777666677666777766666544211100             111 112233556


Q ss_pred             HHHHHHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCC
Q 017940           81 VGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDH  160 (363)
Q Consensus        81 ~~~~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~  160 (363)
                      +. ..+..+.|.|+.+++++.-+.+.....+|+.+++.-+++.+++.+|      |+|+.....|+.++...+--.    
T Consensus        95 ~D-i~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~q------Wl~i~fv~lGlviVg~~d~~~----  163 (372)
T KOG3912|consen   95 CD-IAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQ------WLGILFVSLGLVIVGSLDVHL----  163 (372)
T ss_pred             HH-HhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhh------HHHHHHHHhhhheeeeeeccc----
Confidence            64 6778889999999999999999999999999999999999999999      999999999999886532110    


Q ss_pred             CcchhhhhhhhhcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhccC-CCchhHHHHHHHHHHHHHHHHHHHhcC-
Q 017940          161 SYSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRY-PCKYSSTAILSLFGAIQAAILCLATNR-  238 (363)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-  238 (363)
                                  .++|...-.+...|+++.+.|-+.-|+..++.+|..++. .+|.....|..+++.++...+...... 
T Consensus       164 ------------~~~p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi  231 (372)
T KOG3912|consen  164 ------------VTDPYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYI  231 (372)
T ss_pred             ------------ccCCccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhhe
Confidence                        111233345667899999999999999999988877653 389999999999986655544443211 


Q ss_pred             C-Ccccccccc---hhHHH---------HHHHHHHHHHHHHHHhhh----hcccCCcchhhhhhhhHHHHHHHHHHHHhC
Q 017940          239 N-HSAWSFKGK---IEIIS---------VLYAGIVGSGLCYVGLTW----CVKKKGPVFTAAFSPLVQIMAAMFDIPLLH  301 (363)
Q Consensus       239 ~-~~~~~~~~~---~~~~~---------~~~~g~~~~~~~~~~~~~----a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~  301 (363)
                      + ...+...+.   .+|..         .+++...+...+..+++.    -.|..++++-.++-.+...+-.+++.....
T Consensus       232 ~~~~sfS~~~~g~~eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~  311 (372)
T KOG3912|consen  232 PSGDSFSCNPRGVLEDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGW  311 (372)
T ss_pred             ecCCcCcCCCCcchhhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHH
Confidence            0 000111011   11111         112222223333334432    356677888888888899999999999999


Q ss_pred             CCCchhhHHHHHHHHHHhhhhe
Q 017940          302 ERLHIGSLLGSITVIIGLYILL  323 (363)
Q Consensus       302 e~~~~~~~~G~~li~~g~~l~~  323 (363)
                      |.++..|+.|.++.+.|+.+++
T Consensus       312 E~f~llqilGFliLi~Gi~lY~  333 (372)
T KOG3912|consen  312 EYFHLLQILGFLILIMGIILYN  333 (372)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999997

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.32  E-value=3.9e-11  Score=108.00  Aligned_cols=133  Identities=20%  Similarity=0.355  Sum_probs=114.3

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCh--HHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHH
Q 017940            6 EWKPLIAMIAVEFGFATVNIFLKKVLEEGMNE--LVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGT   83 (363)
Q Consensus         6 ~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~--~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   83 (363)
                      ...|.+++++++++|+...+..|+..+ +.++  .....+++.++.++++++....++.  +..+.+++...+..++++.
T Consensus       126 ~~~G~~~~l~a~~~~a~~~~~~k~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  202 (260)
T TIGR00950       126 NPAGLLLGLGSGISFALGTVLYKRLVK-KEGPELLQFTGWVLLLGALLLLPFAWFLGPN--PQALSLQWGALLYLGLIGT  202 (260)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhHHhh-cCCchHHHHHHHHHHHHHHHHHHHHHhcCCC--CCcchHHHHHHHHHHHHHH
Confidence            457999999999999999999999876 4664  4555578999998888887654322  2346778888888898888


Q ss_pred             HHHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHH
Q 017940           84 SLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAM  147 (363)
Q Consensus        84 ~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~  147 (363)
                      ..++.++++++++.+++.++++.++.|+++.++++++++|+++..+      ++|+.+.+.|++
T Consensus       203 ~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~------~~G~~li~~g~~  260 (260)
T TIGR00950       203 ALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQ------LIGGALIIAAVL  260 (260)
T ss_pred             HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHhcC
Confidence            8999999999999999999999999999999999999999999999      999999988863

>PRK13499 rhamnose-proton symporter; Provisional

Probab=99.30  E-value=1.9e-09  Score=99.01  Aligned_cols=300  Identities=13%  Similarity=0.110  Sum_probs=182.3

Q ss_pred             CChHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHH-HHHHHHHHHH-HHHHhhccC---CCCcCCHHHHHHHHHHH
Q 017940            5 NEWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITC-RLLVATILLA-PIGYFWERN---SRPKLTLRILFCLFFSA   79 (363)
Q Consensus         5 ~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~-r~~~~~i~l~-~~~~~~~~~---~~~~~~~~~~~~~~~~g   79 (363)
                      +...|++..+++.++||+.++-.|+ .+ ..+.-.+ +. -..++.++.- ....+..+.   .....+.+.+...++.|
T Consensus         4 ~~~~G~~~~~i~~~~~GS~~~p~K~-~k-~w~wE~~-W~v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~G   80 (345)
T PRK13499          4 AIILGIIWHLIGGASSGSFYAPFKK-VK-KWSWETM-WSVGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLFG   80 (345)
T ss_pred             hhHHHHHHHHHHHHHhhcccccccc-cC-CCchhHH-HHHHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHHH
Confidence            5678999999999999999999998 34 3442111 11 1111111111 001110010   11225678888899999


Q ss_pred             HHHHHHHHHHHHHHhhccCccchhhh-cchhhHHHHHHHHHhCcccc---ccccccCccceehhhHHHHhHHHhhhhcCC
Q 017940           80 IVGTSLTQYFFLLGIQYTSATFACAF-INMVPVITFVIALPFGLETV---DIKGISGKAKVVGTLVCIGGAMLLTLYKGM  155 (363)
Q Consensus        80 ~~~~~~~~~~~~~al~~~~~~~~~ii-~~~~pv~~~lla~l~~~e~~---~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~  155 (363)
                      ++ -.+++.+++.++++.+.+.+..+ ..++-+...++..++++|-.   +..+  ...-.+|++++++|+.+.......
T Consensus        81 ~~-W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~--g~~~~~gv~liliGi~l~s~Ag~~  157 (345)
T PRK13499         81 AL-WGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNG--GRMTLLGVLVALIGVAIVGRAGQL  157 (345)
T ss_pred             HH-HHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccch--HHHHHHHHHHHHHHHHHHHHhhhh
Confidence            98 59999999999999999999777 57999999999999998754   2221  112377889999999998873322


Q ss_pred             CccCCCcchhhhhhhhhcCCCC-CCCccchhhHHHHHHHHHHHHHHH-------HHHHhhhccCCCchhHHHHHHH---H
Q 017940          156 PLFDHSYSQAETAINVMHMHPT-RKTERWTFGTIALTVGTLLWASWF-------PIQSYIGKRYPCKYSSTAILSL---F  224 (363)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~G~~~~l~a~~~~a~~~-------i~~k~~~~~~~~~~~~~~~~~~---~  224 (363)
                      ....              ++.+ +++.+..+|+++++++.+.++.|.       ...+...+...++......+..   .
T Consensus       158 k~~~--------------~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~  223 (345)
T PRK13499        158 KERK--------------MGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMG  223 (345)
T ss_pred             cccc--------------cccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHH
Confidence            1110              0000 234567799999999999999999       3333321121244443333333   3


Q ss_pred             HHHHHHH-HHHHh-cCCCc--ccccc--cchhHHHH----HHHHHHHHHHHHHHhhhhcccCCcchhhh---h-hhhHHH
Q 017940          225 GAIQAAI-LCLAT-NRNHS--AWSFK--GKIEIISV----LYAGIVGSGLCYVGLTWCVKKKGPVFTAA---F-SPLVQI  290 (363)
Q Consensus       225 ~~~~~~~-~~~~~-~~~~~--~~~~~--~~~~~~~~----~~~g~~~~~~~~~~~~~a~~~~~a~~~s~---~-~~~~pv  290 (363)
                      +..+.-. ...+. .++..  .....  +...+..-    ...|+ .=.++++++..+.++.+......   + +.+..+
T Consensus       224 G~~~~n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~-~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~Vi  302 (345)
T PRK13499        224 GGAITNLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGV-MWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVL  302 (345)
T ss_pred             HHHHHHHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCccchHHHHHhccHHHH
Confidence            3332222 11211 11111  11111  11111111    23333 34567777877777775544333   4 478889


Q ss_pred             HHHHHHHHHhCCCCc------hhhHHHHHHHHHHhhhheecc
Q 017940          291 MAAMFDIPLLHERLH------IGSLLGSITVIIGLYILLWGK  326 (363)
Q Consensus       291 ~~~~~~~~~~~e~~~------~~~~~G~~li~~g~~l~~~~~  326 (363)
                      ++.+.+. +++|.=+      ...++|.+++++|..+....+
T Consensus       303 istlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~~  343 (345)
T PRK13499        303 CGNLWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGLGN  343 (345)
T ss_pred             HHHHhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhhcc
Confidence            9999998 5999766      566889999999998876553

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=99.26  E-value=1.3e-11  Score=96.32  Aligned_cols=105  Identities=17%  Similarity=0.319  Sum_probs=88.4

Q ss_pred             HHHHHHHHHHHHHHHHhhccCC--CCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhcchhhHHHHHHHHH
Q 017940           42 TCRLLVATILLAPIGYFWERNS--RPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALP  119 (363)
Q Consensus        42 ~~r~~~~~i~l~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l  119 (363)
                      .+|+..+.+++..+...+++.+  .+..+++.+.+....|+++...++.++++|+++.+ +.++++.++.|+++.+++++
T Consensus         2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~   80 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL   80 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence            5789999999988887754321  12234566777788888876699999999999999 58889999999999999999


Q ss_pred             hCccccccccccCccceehhhHHHHhHHHhhhhc
Q 017940          120 FGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYK  153 (363)
Q Consensus       120 ~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~  153 (363)
                      ++|||+++++      +++++++++|++++.+.+
T Consensus        81 ~~~er~~~~~------~~a~~l~~~Gv~li~~~~  108 (113)
T PF13536_consen   81 FFKERLSPRR------WLAILLILIGVILIAWSD  108 (113)
T ss_pred             HhcCCCCHHH------HHHHHHHHHHHHHHhhhh
Confidence            9999999999      999999999999998744

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=99.25  E-value=5.4e-11  Score=102.75  Aligned_cols=266  Identities=12%  Similarity=0.092  Sum_probs=182.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCccchhhhcchhhHHHHH
Q 017940           37 ELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQY-TSATFACAFINMVPVITFV  115 (363)
Q Consensus        37 ~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~-~~~~~~~ii~~~~pv~~~l  115 (363)
                      -..++|.++++-..--++..-.. ...+++.+.|++.....   + .+..+.+.++++++ ++...-.++.+-.++.+++
T Consensus        33 gNLITFaqFlFia~eGlif~skf-~~~k~kiplk~Y~i~V~---m-FF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~  107 (330)
T KOG1583|consen   33 GNLITFAQFLFIATEGLIFTSKF-FTVKPKIPLKDYAITVA---M-FFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMI  107 (330)
T ss_pred             eeehHHHHHHHHHHhceeeeccc-cccCCCCchhhhheehh---e-eeeeeeeccceeeecccceEEEEEecCcHHHHHH
Confidence            36777887777666555443211 12335566666544333   2 35667778899998 8888889999999999999


Q ss_pred             HHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCCcchhhhhhhhhcCCCCCCCccchhhHHHHHHHHH
Q 017940          116 IALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIALTVGTL  195 (363)
Q Consensus       116 la~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~  195 (363)
                      +++++.+.|.+.+|      +.++++..+|+++......++...       +.++.++.+..+....+..|+.+...+.+
T Consensus       108 ~g~il~~k~Ys~~Q------y~Sv~~iTiGiiIcTl~s~~d~~~-------~~~~l~~~~~~~~~~~w~iGi~lL~~al~  174 (330)
T KOG1583|consen  108 LGWILLGKRYSLRQ------YSSVLMITIGIIICTLFSSKDGRS-------KLSGLDSGSAQSDFFWWLIGIALLVFALL  174 (330)
T ss_pred             HHHHhccceeehhh------hhhHHhhhhhheeEEeecCcchhh-------hhcccccCcccccchHHHHHHHHHHHHHH
Confidence            99999999999999      999999999999987754433221       11111111112335667889999999888


Q ss_pred             HHHHHHHHHHhhhccCC-CchhHHHHHHHHHHHHHHHHHHHhcCCC---------------cccccccchhHHHHHHHHH
Q 017940          196 LWASWFPIQSYIGKRYP-CKYSSTAILSLFGAIQAAILCLATNRNH---------------SAWSFKGKIEIISVLYAGI  259 (363)
Q Consensus       196 ~~a~~~i~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~g~  259 (363)
                      .-|.-.+.++..-+++. ++-+.+++.-..    .+|..++..++.               +.....-+..|..++.- +
T Consensus       175 ~sa~mgiyqE~~Y~kyGKh~~EalFytH~L----sLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n-~  249 (330)
T KOG1583|consen  175 LSAYMGIYQETTYQKYGKHWKEALFYTHFL----SLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFN-V  249 (330)
T ss_pred             HHHHHHHHHHHHHHHhcCChHHHHHHHHHh----ccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHHH-H
Confidence            88888887776655433 556666665544    445555543321               01111122345544433 3


Q ss_pred             HHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheec
Q 017940          260 VGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWG  325 (363)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~  325 (363)
                      +.+-+|.-..+..-.+.++.+++++..+.-+++.+++.+.|+.+++++.|+|..++++|..++...
T Consensus       250 L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~  315 (330)
T KOG1583|consen  250 LTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANV  315 (330)
T ss_pred             HHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            344445445556667778899999999999999999999999999999999999999999988643

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.19  E-value=6.5e-10  Score=101.87  Aligned_cols=136  Identities=16%  Similarity=0.112  Sum_probs=113.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHHH
Q 017940            7 WKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLT   86 (363)
Q Consensus         7 ~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   86 (363)
                      ..|.++.++++++|+...+..|+..+ +.++..... ...++.+++.++......  ....++..+...+..|+++..++
T Consensus       147 ~~G~ll~l~aa~~~a~~~v~~r~~~~-~~~~~~~~~-~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~l~lgv~~t~~~  222 (293)
T PRK10532        147 LTGAALALGAGACWAIYILSGQRAGA-EHGPATVAI-GSLIAALIFVPIGALQAG--EALWHWSILPLGLAVAILSTALP  222 (293)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhc-cCCchHHHH-HHHHHHHHHHHHHHHccC--cccCCHHHHHHHHHHHHHHHHHH
Confidence            46999999999999999999998876 477777654 445566666666554322  22245666766778899888999


Q ss_pred             HHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhh
Q 017940           87 QYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLY  152 (363)
Q Consensus        87 ~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~  152 (363)
                      +.++++++++.+++.++++..++|+++.++++++++|+++..+      ++|.++.+.|++.....
T Consensus       223 ~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~------~iG~~lIl~~~~~~~~~  282 (293)
T PRK10532        223 YSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQ------WLALGAIIAASMGSTLT  282 (293)
T ss_pred             HHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHHHHHhc
Confidence            9999999999999999999999999999999999999999999      99999999999988753

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.19  E-value=5.8e-10  Score=91.97  Aligned_cols=138  Identities=13%  Similarity=0.138  Sum_probs=113.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhhcc------CCCchhHHHHHHHHHHHHHHHHHHHhcCCCccccc--------c-cchh
Q 017940          186 GTIALTVGTLLWASWFPIQSYIGKR------YPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSF--------K-GKIE  250 (363)
Q Consensus       186 G~~~~l~a~~~~a~~~i~~k~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~-~~~~  250 (363)
                      |.++++.+.++.|++.+..|+..++      ..++.....+....+.+++.|..+..|+.......        . ....
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            6789999999999999999998776      34889999999999999999999887763311110        0 1233


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhhee
Q 017940          251 IISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLW  324 (363)
Q Consensus       251 ~~~~~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~  324 (363)
                      +..++..|++ ........+..+++++|...+++..+..+...++++++++|+++..+++|..+.++|.+++++
T Consensus        81 ~~~~~~~~~~-~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   81 IFLLILSGLL-AFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHH-HHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            4555555554 446666777899999999999999999999999999999999999999999999999998864

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.16  E-value=7.9e-10  Score=101.26  Aligned_cols=137  Identities=15%  Similarity=0.156  Sum_probs=115.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHHH
Q 017940            7 WKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLT   86 (363)
Q Consensus         7 ~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   86 (363)
                      ..|.++.++++++|+...+..|....  -++.....+++.++.+.+.++............+.+.|......|+++..+.
T Consensus       149 ~~G~l~~l~a~~~~a~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~  226 (292)
T PRK11272        149 PWGAILILIASASWAFGSVWSSRLPL--PVGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIA  226 (292)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcCC--CcchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHH
Confidence            46999999999999999999998643  2345667788888888877776543322112235677888888999888999


Q ss_pred             HHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhh
Q 017940           87 QYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTL  151 (363)
Q Consensus        87 ~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~  151 (363)
                      +.++++++++.+++.++++..+.|+++.++++++++|+++..+      ++|.++.+.|+.+...
T Consensus       227 ~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~------iiG~~lIi~gv~~~~~  285 (292)
T PRK11272        227 ISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIE------WLALGVIVFAVVLVTL  285 (292)
T ss_pred             HHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHH------HHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999      9999999999998875

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=99.14  E-value=1.8e-10  Score=94.73  Aligned_cols=212  Identities=12%  Similarity=0.073  Sum_probs=157.6

Q ss_pred             HHHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCCcc
Q 017940           84 SLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYS  163 (363)
Q Consensus        84 ~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~~~  163 (363)
                      ...++.|..|++.++++.++.+..+.-.|+.+++++++++|+...+      +++.++++.|+.++.+.|.+        
T Consensus        64 t~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~k------IlaailAI~GiVmiay~DN~--------  129 (290)
T KOG4314|consen   64 TGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFK------ILAAILAIGGIVMIAYADNE--------  129 (290)
T ss_pred             ecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhh------HHHHHHHhCcEEEEEeccch--------
Confidence            5678999999999999999999999999999999999999999999      99999999999999875532        


Q ss_pred             hhhhhhhhhcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhccCC--CchhHHHHHHHHHHHH-HHHHHH--HhcC
Q 017940          164 QAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYP--CKYSSTAILSLFGAIQ-AAILCL--ATNR  238 (363)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~--~~~~  238 (363)
                                      ......|+.+++.+++..|+|-++-|+......  |....+.-..++...+ ..|...  +.+.
T Consensus       130 ----------------~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~V  193 (290)
T KOG4314|consen  130 ----------------HADEIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPALILAFTGV  193 (290)
T ss_pred             ----------------hhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHHHHHHhch
Confidence                            223358999999999999999999999875522  3222222222222221 112111  1221


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHH
Q 017940          239 NHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIG  318 (363)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g  318 (363)
                      +  .+.......|+.+...+.++.. ...+.+.++..++|...+.-+.....--...+.++-+-..+.....|.++++.|
T Consensus       194 E--~~qsFA~~PWG~l~G~A~L~lA-FN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~  270 (290)
T KOG4314|consen  194 E--HLQSFAAAPWGCLCGAAGLSLA-FNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIG  270 (290)
T ss_pred             H--HHHHHhhCCchhhhhHHHHHHH-HhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            2  1221123457777777766543 455677899999999999988888888889998766666788999999999999


Q ss_pred             hhhheecccc
Q 017940          319 LYILLWGKNK  328 (363)
Q Consensus       319 ~~l~~~~~~~  328 (363)
                      ..+......|
T Consensus       271 FiLiiiP~d~  280 (290)
T KOG4314|consen  271 FILIIIPEDK  280 (290)
T ss_pred             HHheecccch
Confidence            9988765544

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.12  E-value=1.3e-09  Score=100.05  Aligned_cols=138  Identities=14%  Similarity=0.120  Sum_probs=109.7

Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccc--cccchhHHHHHHHHH
Q 017940          182 RWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWS--FKGKIEIISVLYAGI  259 (363)
Q Consensus       182 ~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~  259 (363)
                      +..+|+++.++++++|+...+..|.. .+ .+|.+...++..++.+...+.....++ .....  ..+...+. ....+.
T Consensus         5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~-~~~~~~~~~R~~~a~~~l~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~   80 (296)
T PRK15430          5 QTRQGVLLALAAYFIWGIAPAYFKLI-YY-VPADEILTHRVIWSFFFMVVLMSICRQ-WSYLKTLIQTPQKIF-MLAVSA   80 (296)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHh-cC-CCHHHHHHHHHHHHHHHHHHHHHHHcc-HHHHHHHHcCHHHHH-HHHHHH
Confidence            34589999999999999999999875 44 478999999999998877766544321 11110  11222232 233555


Q ss_pred             HHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhhe
Q 017940          260 VGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILL  323 (363)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~  323 (363)
                      +..+..+.++++++++++++.++.+.++.|+++.++++++++|+++..+++|+++.++|+.+..
T Consensus        81 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~  144 (296)
T PRK15430         81 VLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL  144 (296)
T ss_pred             HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence            6677889999999999999999999999999999999999999999999999999999998775

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.10  E-value=1.8e-09  Score=101.06  Aligned_cols=140  Identities=13%  Similarity=0.137  Sum_probs=107.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCCCh-HHHHHHHHHHHHHHHHHHHHhhccCCC----CcCCHHHHHHHHHHHHHH
Q 017940            8 KPLIAMIAVEFGFATVNIFLKKVLEEGMNE-LVFITCRLLVATILLAPIGYFWERNSR----PKLTLRILFCLFFSAIVG   82 (363)
Q Consensus         8 ~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~r~~~~~i~l~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~   82 (363)
                      .|.++++.++++|+.+.+..|....+ .++ ...+++...++.+.+.+......+...    ...+... ...+..++. 
T Consensus       189 lG~~l~l~aa~~wa~~~il~~~~~~~-~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~i~y~~i~-  265 (358)
T PLN00411        189 IGGALLTIQGIFVSVSFILQAHIMSE-YPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDITL-ITIVTMAII-  265 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH-cCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchHH-HHHHHHHHH-
Confidence            48899999999999999999988774 654 466667777666666555544332111    1123332 223345555 


Q ss_pred             HHHHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCC
Q 017940           83 TSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMP  156 (363)
Q Consensus        83 ~~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~  156 (363)
                      ..+.+.++++++++.+++.++++.++.|+++.++++++++|+++..+      ++|.++++.|+.++...+..+
T Consensus       266 t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~------~iG~~LIl~Gv~l~~~~~~~~  333 (358)
T PLN00411        266 TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGC------LIGGILITLGFYAVMWGKANE  333 (358)
T ss_pred             HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHHHHHhhhhhh
Confidence            46788899999999999999999999999999999999999999999      999999999999998654433

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.08  E-value=3.4e-09  Score=96.50  Aligned_cols=134  Identities=15%  Similarity=0.169  Sum_probs=102.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhHHHHHHHHHHHHHHHH
Q 017940          187 TIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGLCY  266 (363)
Q Consensus       187 ~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  266 (363)
                      ..+.+.+++++|...+..|+..++ .++.  ..+......+...|....... ...+.... ..+...+..+.+.....+
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~-~~~~--~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~   77 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADK-EPDF--LWWALLAHSVLLTPYGLWYLA-QVGWSRLP-ATFWLLLAISAVANMVYF   77 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCc-hhHH--HHHHHHHHHHHHHHHHHHhcc-cCCCCCcc-hhhHHHHHHHHHHHHHHH
Confidence            468899999999999999988776 3333  355555666666666554311 12232222 233334444555677888


Q ss_pred             HHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheec
Q 017940          267 VGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWG  325 (363)
Q Consensus       267 ~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~  325 (363)
                      .+++++.++.+++.++++.+++|+++.+++++++||+++.++++|+.+++.|+.+....
T Consensus        78 ~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~  136 (281)
T TIGR03340        78 LGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLS  136 (281)
T ss_pred             HHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcc
Confidence            89999999999999999999999999999999999999999999999999999987643

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>TIGR00688 rarD rarD protein

Probab=99.08  E-value=2.4e-09  Score=96.18  Aligned_cols=136  Identities=13%  Similarity=0.135  Sum_probs=107.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHHhcCCC---cccccccchh-HHHHHHHHHH
Q 017940          185 FGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNH---SAWSFKGKIE-IISVLYAGIV  260 (363)
Q Consensus       185 ~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~g~~  260 (363)
                      +|..+.++++++|+...+..|.. .+ -+|.+..+++++++.++..+......+..   .......... +..+...|++
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~~-~~-~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   79 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKLL-KP-LPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL   79 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHh-cc-CCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence            58899999999999999999984 44 47899999999999887766654433210   0111111122 3344555554


Q ss_pred             HHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhhe
Q 017940          261 GSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILL  323 (363)
Q Consensus       261 ~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~  323 (363)
                       .+..+.++++++++++++.++.+.++.|+++.++++++++|+++.++++|.++.++|+.+..
T Consensus        80 -~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~  141 (256)
T TIGR00688        80 -IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI  141 (256)
T ss_pred             -HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence             66788999999999999999999999999999999999999999999999999999988764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.02  E-value=5e-09  Score=96.09  Aligned_cols=133  Identities=14%  Similarity=0.118  Sum_probs=105.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHHH
Q 017940            7 WKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLT   86 (363)
Q Consensus         7 ~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   86 (363)
                      ..|.+++++++++|+...+..|+..+ +.++....+   ..+.+.+.+...... ......++..+......|+. ..+.
T Consensus       155 ~~G~~~~l~aa~~~A~~~v~~k~~~~-~~~~~~~~~---~~~~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~~~~-t~~~  228 (295)
T PRK11689        155 PLSYGLAFIGAFIWAAYCNVTRKYAR-GKNGITLFF---ILTALALWIKYFLSP-QPAMVFSLPAIIKLLLAAAA-MGFG  228 (295)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhccC-CCCchhHHH---HHHHHHHHHHHHHhc-CccccCCHHHHHHHHHHHHH-HHHH
Confidence            35889999999999999999998765 477765433   222333333222222 11223567778777777754 6889


Q ss_pred             HHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhh
Q 017940           87 QYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTL  151 (363)
Q Consensus        87 ~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~  151 (363)
                      +.++++++++.+++.++.+.++.|++..++++++++|+++..+      ++|.++++.|+.+...
T Consensus       229 ~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~------~iG~~lI~~gv~~~~~  287 (295)
T PRK11689        229 YAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSF------WQGVAMVTAGSLLCWL  287 (295)
T ss_pred             HHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHhHHHHhh
Confidence            9999999999999999999999999999999999999999999      9999999999988765

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=99.00  E-value=1.6e-08  Score=92.19  Aligned_cols=281  Identities=16%  Similarity=0.180  Sum_probs=157.3

Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHH
Q 017940            1 MKSCNEWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAI   80 (363)
Q Consensus         1 M~~~~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~   80 (363)
                      |+ .+...|.++++.++++-+....+-|+...+ .+.   .-.|.              .++..+-.+++    ..+.|.
T Consensus         1 ~~-~~~~iGv~lav~ss~~~~~g~~lqk~~~~r-~~~---~~~~~--------------~~~~~~~l~~~----~W~~G~   57 (300)
T PF05653_consen    1 MN-TDFYIGVLLAVVSSIFIAVGFNLQKKSHLR-LPR---GSLRA--------------GSGGRSYLRRP----LWWIGL   57 (300)
T ss_pred             CC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhc---ccccc--------------cchhhHHHhhH----HHHHHH
Confidence            44 355679999999999999999988876542 110   00000              00000001122    233444


Q ss_pred             HHHHHHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCC
Q 017940           81 VGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDH  160 (363)
Q Consensus        81 ~~~~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~  160 (363)
                      +.+.++..+.+.|+.+.|++.++.+..+.-++..+++..++|||++.++      +.|+.+++.|..++......+.+. 
T Consensus        58 ~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~------~~G~~l~i~G~~liv~~~~~~~~~-  130 (300)
T PF05653_consen   58 LLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRD------IVGCALIILGSVLIVIFAPKEEPI-  130 (300)
T ss_pred             HHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhH------HhhHHHHHhhheeeEEeCCCCCCc-
Confidence            4456777888999999999999999999999999999999999999999      999999999998876533222110 


Q ss_pred             CcchhhhhhhhhcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHH-------HHHHHH
Q 017940          161 SYSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAI-------QAAILC  233 (363)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~  233 (363)
                         .+..+.-..-     .+... ..+.... ..+...+.....+|..++  +...........++.       +...+.
T Consensus       131 ---~t~~~l~~~~-----~~~~f-l~y~~~~-~~~~~~L~~~~~~r~g~~--~i~vyi~i~sl~Gs~tvl~~K~i~~~i~  198 (300)
T PF05653_consen  131 ---HTLDELIALL-----SQPGF-LVYFILV-LVLILILIFFIKPRYGRR--NILVYISICSLIGSFTVLSAKAISILIK  198 (300)
T ss_pred             ---CCHHHHHHHh-----cCcce-ehhHHHH-HHHHHHHHHhhcchhccc--ceEEEEEEeccccchhhhHHHHHHHHHH
Confidence               0000000000     00111 1111111 112222222222232222  111111111111111       111111


Q ss_pred             HHhcCCCcccccccchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhhhh-HHHHHHHHHHHHhCCC--Cchhh--
Q 017940          234 LATNRNHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPL-VQIMAAMFDIPLLHER--LHIGS--  308 (363)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~-~pv~~~~~~~~~~~e~--~~~~~--  308 (363)
                      ....+ ..++.  ++..|..++.. +.+........++|+++.+++.+.++.+. -...+.+-+.++++|.  .+..+  
T Consensus       199 ~~~~g-~~~f~--~~~~y~l~~~~-v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~  274 (300)
T PF05653_consen  199 LTFSG-DNQFT--YPLTYLLLLVL-VVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQII  274 (300)
T ss_pred             HHhcC-chhhh--hhHHHHHHHHH-HHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHH
Confidence            11111 12222  33345444333 33556677778899999999988887655 5566677777788875  45533  


Q ss_pred             --HHHHHHHHHHhhhheeccc
Q 017940          309 --LLGSITVIIGLYILLWGKN  327 (363)
Q Consensus       309 --~~G~~li~~g~~l~~~~~~  327 (363)
                        ..|..+++.|+++....+.
T Consensus       275 ~~~~G~~~ii~GV~lL~~~~~  295 (300)
T PF05653_consen  275 GFLCGFLIIIIGVFLLSSSKD  295 (300)
T ss_pred             HHHHHHHHHHHhhheeeccCc
Confidence              4678888999998875443

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.94  E-value=2.1e-08  Score=92.12  Aligned_cols=139  Identities=15%  Similarity=0.197  Sum_probs=108.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHHhhccCC-----CCcCCHHHHHHHHHHH
Q 017940            7 WKPLIAMIAVEFGFATVNIFLKKVLEEG--MNELVFITCRLLVATILLAPIGYFWERNS-----RPKLTLRILFCLFFSA   79 (363)
Q Consensus         7 ~~~~~~~l~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~r~~~~~i~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~g   79 (363)
                      ..|.+++++++++|+...+..|...++.  .+.....++....+.+.+.......+...     ....+...+...+..|
T Consensus       142 ~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  221 (299)
T PRK11453        142 MLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLA  221 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHH
Confidence            3699999999999999999999875421  12233344444444433333322222111     1235678888889999


Q ss_pred             HHHHHHHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhh
Q 017940           80 IVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTL  151 (363)
Q Consensus        80 ~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~  151 (363)
                      +++..+.+.+++.++++.++++++.+..+.|++..++++++++|+++..+      ++|.++.+.|+.+...
T Consensus       222 i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~------~iG~~lI~~gv~l~~~  287 (299)
T PRK11453        222 FVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQ------FLGAVLIMAGLYINVF  287 (299)
T ss_pred             HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHH------HHHHHHHHHHHHHHhc
Confidence            99889999999999999999999999999999999999999999999999      9999999999998765

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=98.93  E-value=4.8e-08  Score=84.48  Aligned_cols=261  Identities=13%  Similarity=0.094  Sum_probs=183.1

Q ss_pred             CCCh--HHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhcchhhH
Q 017940           34 GMNE--LVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPV  111 (363)
Q Consensus        34 ~~~~--~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pv  111 (363)
                      ++.|  +.+++.++++-..+.+.-.... +.+.+..+||..   ..++.+ ....+.+..-++.|++-..-.++.++--+
T Consensus        70 gfkp~GWylTlvQf~~Ysg~glie~~~~-~~k~r~iP~rtY---~~la~~-t~gtmGLsn~SlgYLNYPtQviFKccKli  144 (367)
T KOG1582|consen   70 GFKPFGWYLTLVQFLVYSGFGLIELQLI-QTKRRVIPWRTY---VILAFL-TVGTMGLSNGSLGYLNYPTQVIFKCCKLI  144 (367)
T ss_pred             cCcccchHHHHHHHHHHHhhhheEEEee-cccceecchhHh---hhhHhh-hhhccccCcCccccccCcHHHHHHhhhhh
Confidence            4554  5677788777655555444322 223333455543   444444 35566666677888777666666776666


Q ss_pred             HHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCCcchhhhhhhhhcCCCCCCCccchhhHHHHH
Q 017940          112 ITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIALT  191 (363)
Q Consensus       112 ~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l  191 (363)
                      =+.+.+.++-+.|....+      +++..+...|+++....|..                  +    +++-+..|+.+.-
T Consensus       145 PVmiggifIqGkRY~v~d------~~aA~lm~lGli~FTLADs~------------------~----sPNF~~~Gv~mIs  196 (367)
T KOG1582|consen  145 PVMIGGIFIQGKRYGVHD------YIAAMLMSLGLIWFTLADSQ------------------T----SPNFNLIGVMMIS  196 (367)
T ss_pred             hhhheeeeeccccccHHH------HHHHHHHHHHHHhhhhcccc------------------c----CCCcceeeHHHHH
Confidence            666778888888888877      99999999999999875542                  1    2333458888888


Q ss_pred             HHHHHHHHHHHHHHhhhccCC-CchhHHHHHHHHHHHHHHHHHHHhcCCCccccc---ccchhHHHHHHHHHHHHHHHHH
Q 017940          192 VGTLLWASWFPIQSYIGKRYP-CKYSSTAILSLFGAIQAAILCLATNRNHSAWSF---KGKIEIISVLYAGIVGSGLCYV  267 (363)
Q Consensus       192 ~a~~~~a~~~i~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~  267 (363)
                      .|-++-|.---.+++..+..+ +..+..++...++.+..+......++-.+.|..   .+....+..++.+. ++.++..
T Consensus       197 gALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~-~gylG~~  275 (367)
T KOG1582|consen  197 GALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSL-AGYLGIV  275 (367)
T ss_pred             HHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHH-HhHhhHH
Confidence            888888877777777766544 445667777778888777766666554343421   12223344444443 4556666


Q ss_pred             HhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheecccc
Q 017940          268 GLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKNK  328 (363)
Q Consensus       268 ~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~  328 (363)
                      .....++..+|..++.+....-.+++++++++|..++|....-|..+++.|+++-.+.++.
T Consensus       276 ~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~n  336 (367)
T KOG1582|consen  276 FVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKRN  336 (367)
T ss_pred             HHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCCC
Confidence            6777788899999999999999999999999999999999999999999999998887743

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.90  E-value=5.8e-08  Score=76.96  Aligned_cols=123  Identities=15%  Similarity=0.128  Sum_probs=93.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhHHHHHHHHHHHHHH
Q 017940          185 FGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGL  264 (363)
Q Consensus       185 ~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  264 (363)
                      .|.++.+.+.++-+...++.|+-.++.++ ...... .     .......        .   +   ....++.|+++.++
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~-~~~~~~-~-----~~~~~~~--------~---~---p~~~i~lgl~~~~l   60 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLPL-LSHAWD-F-----IAALLAF--------G---L---ALRAVLLGLAGYAL   60 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCC-ccchhH-H-----HHHHHHH--------h---c---cHHHHHHHHHHHHH
Confidence            47789999999999999999998877432 221111 0     0000000        0   1   01245677888999


Q ss_pred             HHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHH--HhCCCCchhhHHHHHHHHHHhhhheecccc
Q 017940          265 CYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIP--LLHERLHIGSLLGSITVIIGLYILLWGKNK  328 (363)
Q Consensus       265 ~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~--~~~e~~~~~~~~G~~li~~g~~l~~~~~~~  328 (363)
                      ++.+|.+++++.+++.+.++....+++..+.++.  ++||++|+.+++|++++++|+++..+.++|
T Consensus        61 a~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~~  126 (129)
T PRK02971         61 SMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTTK  126 (129)
T ss_pred             HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCCC
Confidence            9999999999999999999999998888888875  899999999999999999999999865543

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=98.88  E-value=3.9e-10  Score=96.01  Aligned_cols=276  Identities=18%  Similarity=0.170  Sum_probs=190.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHHHH
Q 017940            8 KPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLTQ   87 (363)
Q Consensus         8 ~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   87 (363)
                      ..++.+++-++.||..+....+.   |-+|.+.+.-.-+-+.++.+.+.++    ..|..+.+.+...++.|++ -.+++
T Consensus         2 ~~~liaL~P~l~WGsip~v~~k~---GG~p~qQ~lGtT~GALifaiiv~~~----~~p~~T~~~~iv~~isG~~-Ws~GQ   73 (288)
T COG4975           2 MDLLIALLPALGWGSIPLVANKF---GGKPYQQTLGTTLGALIFAIIVFLF----VSPELTLTIFIVGFISGAF-WSFGQ   73 (288)
T ss_pred             hhHHHHHHHHHHhcccceeeeec---CCChhHhhhhccHHHHHHHHHHhee----ecCccchhhHHHHHHhhhH-hhhhh
Confidence            46788999999999999877654   5567666655444444444433333    2344678888888899988 58999


Q ss_pred             HHHHHHhhccCccchhhhc-chhhHHHHHHHHHhCccccccccccCcccee---hhhHHHHhHHHhhhhcCCCccCCCcc
Q 017940           88 YFFLLGIQYTSATFACAFI-NMVPVITFVIALPFGLETVDIKGISGKAKVV---GTLVCIGGAMLLTLYKGMPLFDHSYS  163 (363)
Q Consensus        88 ~~~~~al~~~~~~~~~ii~-~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~---gi~~~~~Gv~l~~~~~~~~~~~~~~~  163 (363)
                      ...+.|+++.+.+.+..+. .++-+-+.+++++.++|-.+..+     .++   ++++.++|+.+.++.+..+..     
T Consensus        74 ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~-----~IlG~iAliliviG~~lTs~~~~~nk~-----  143 (288)
T COG4975          74 ANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQ-----IILGFIALILIVIGIYLTSKQDRNNKE-----  143 (288)
T ss_pred             hhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchh-----HHHHHHHHHHHHHhheEeeeecccccc-----
Confidence            9999999999999999985 59999999999999999877655     122   345556666666653321111     


Q ss_pred             hhhhhhhhhcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHHhcCCCccc
Q 017940          164 QAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAW  243 (363)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (363)
                                   .++.++..+|....+.+.+.|-.|.++.+...-+   .++...-+.....+..+.+... +.+. ..
T Consensus       144 -------------~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~v~---g~saiLPqAiGMv~~ali~~~~-~~~~-~~  205 (288)
T COG4975         144 -------------EENPSNLKKGIVILLISTLGYVGYVVLFQLFDVD---GLSAILPQAIGMVIGALILGFF-KMEK-RF  205 (288)
T ss_pred             -------------ccChHhhhhheeeeeeeccceeeeEeeecccccc---chhhhhHHHHHHHHHHHHHhhc-cccc-ch
Confidence                         2335566789999999999999999988776533   2333333332222222222222 1111 11


Q ss_pred             ccccchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhH----HHHHHHHHHh
Q 017940          244 SFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSL----LGSITVIIGL  319 (363)
Q Consensus       244 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~----~G~~li~~g~  319 (363)
                         ++..|.. +..|+. -+.+..++..+.++.+.+..=.++.+..+++.+-+.++++|+=|..++    +|++++++|.
T Consensus       206 ---~K~t~~n-ii~G~~-Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvga  280 (288)
T COG4975         206 ---NKYTWLN-IIPGLI-WAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGA  280 (288)
T ss_pred             ---HHHHHHH-HhhHHH-HHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHh
Confidence               2233433 334443 346788888899999998888899999999999999999999998876    5888888887


Q ss_pred             hhhee
Q 017940          320 YILLW  324 (363)
Q Consensus       320 ~l~~~  324 (363)
                      .+...
T Consensus       281 i~lg~  285 (288)
T COG4975         281 ILLGI  285 (288)
T ss_pred             hhhhe
Confidence            76644

>TIGR00803 nst UDP-galactose transporter

Probab=98.87  E-value=3e-08  Score=87.13  Aligned_cols=210  Identities=14%  Similarity=0.045  Sum_probs=126.3

Q ss_pred             cchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCCcchhhhhhhhhcCCC---
Q 017940          100 TFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHP---  176 (363)
Q Consensus       100 ~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  176 (363)
                      .......+..++++++.++.+.++|.+..+      +++.++...|+......+.+....   ..-..+...-|.++   
T Consensus         5 Pa~~~~~s~~l~~v~l~~~~~~~~~~~~~~------i~~~~l~~~g~l~~~ls~~q~~al---~~l~~~~~~~~~~~~~~   75 (222)
T TIGR00803         5 PIHIIFKQNNLVLIALGNLLAAGKQVTQLK------ILSTALMTLGSLVASLGDDQWFSL---KLLKLGVAIVQMVQSSA   75 (222)
T ss_pred             cchHHHHhcchHHHHHhcccccceeeehHH------HHHHHHHHHHHHHhHhhHHHHHHH---HHHHHhHeeeecCCCCc
Confidence            344566778889999999999999988777      999999888887654432110000   00000000000000   


Q ss_pred             -CCCCccchhhHHHHHHHHHHHHHHHHHHHhhhccCCCchhH-HHHHHHHHHHHHHHHHHHhcCCC-cccc--cccchhH
Q 017940          177 -TRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSS-TAILSLFGAIQAAILCLATNRNH-SAWS--FKGKIEI  251 (363)
Q Consensus       177 -~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~  251 (363)
                       .....+...|....+.+.++-+...+..++..++.+..... +......+.+...........+. ..+.  ...+...
T Consensus        76 ~~~~~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (222)
T TIGR00803        76 KTLMFGNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAV  155 (222)
T ss_pred             cccccccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHH
Confidence             01112445677777788888888888888876663221111 11111222221111111111111 1111  0011111


Q ss_pred             HHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhh
Q 017940          252 ISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYIL  322 (363)
Q Consensus       252 ~~~~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~  322 (363)
                      +.   . ++....+..+..+.+++.++...+....++++++.+++++++||+++..+++|+.+++.|++++
T Consensus       156 ~~---~-~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       156 WI---V-GLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             HH---H-HHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence            11   1 2335567777889999999999999999999999999999999999999999999999998753

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.84  E-value=1.9e-08  Score=92.60  Aligned_cols=140  Identities=18%  Similarity=0.222  Sum_probs=108.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhc-CCChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCH----------HHHHHH
Q 017940            7 WKPLIAMIAVEFGFATVNIFLKKVLEE-GMNELVFITCRLLVATILLAPIGYFWERNSRPKLTL----------RILFCL   75 (363)
Q Consensus         7 ~~~~~~~l~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~----------~~~~~~   75 (363)
                      ..|.+++++++++|+...+..|...++ +.++..++++....+.+.++|+....+.......++          ..+...
T Consensus       144 ~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (302)
T TIGR00817       144 WAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVS  223 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHH
Confidence            469999999999999999999987651 489999999999999988888876543211100000          111112


Q ss_pred             HHHHHHHHHHHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhh
Q 017940           76 FFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLY  152 (363)
Q Consensus        76 ~~~g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~  152 (363)
                      +..+.......+.+++.+++++++..++++..+.|+++.++++++++|+++..+      ++|.++++.|+.+....
T Consensus       224 ~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~------~~G~~lil~Gv~l~~~~  294 (302)
T TIGR00817       224 LVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQ------VFGTGIAIAGVFLYSRV  294 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhH------HHHHHHHHHHHHHHHHH
Confidence            233332234445677789999999999999999999999999999999999999      99999999999998754

specificities overlap.

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.80  E-value=3.5e-08  Score=76.91  Aligned_cols=107  Identities=21%  Similarity=0.373  Sum_probs=79.5

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCcccccccchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHH
Q 017940          220 ILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPL  299 (363)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~  299 (363)
                      ++...+.+..........+............+...+..|.+....++.++.++.++.++ .++.+..++|+++.+++.++
T Consensus         3 ~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~   81 (113)
T PF13536_consen    3 FRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLF   81 (113)
T ss_pred             HHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHH
Confidence            44555555555555553332111221122345555666666666899999999999994 88899999999999999999


Q ss_pred             hCCCCchhhHHHHHHHHHHhhhheeccc
Q 017940          300 LHERLHIGSLLGSITVIIGLYILLWGKN  327 (363)
Q Consensus       300 ~~e~~~~~~~~G~~li~~g~~l~~~~~~  327 (363)
                      ++|+++..+++|++++++|+.+..+.+-
T Consensus        82 ~~er~~~~~~~a~~l~~~Gv~li~~~~~  109 (113)
T PF13536_consen   82 FKERLSPRRWLAILLILIGVILIAWSDL  109 (113)
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence            9999999999999999999999987543

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.73  E-value=2.5e-07  Score=76.12  Aligned_cols=133  Identities=20%  Similarity=0.318  Sum_probs=113.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhc------CCChHHHHHHHHHHHHHHHHHHHHhhccCCCCc----C-------CHHH
Q 017940            9 PLIAMIAVEFGFATVNIFLKKVLEE------GMNELVFITCRLLVATILLAPIGYFWERNSRPK----L-------TLRI   71 (363)
Q Consensus         9 ~~~~~l~~~~~~~~~~~~~k~~~~~------~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~----~-------~~~~   71 (363)
                      |.++++.+.++.+...+..|...++      +.++..+..+....+.+++++.....+.....+    .       +.+.
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            5688999999999999999998775      678999999999999999999888765543111    0       2344


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHH
Q 017940           72 LFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAML  148 (363)
Q Consensus        72 ~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l  148 (363)
                      +...+..|+++ +..+...+..++++++...+++..+-.+.+.++++++++|+++..+      ++|+.+++.|+.+
T Consensus        81 ~~~~~~~~~~~-~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~------~~G~~l~~~G~~~  150 (153)
T PF03151_consen   81 IFLLILSGLLA-FLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQ------IIGIVLALVGVLL  150 (153)
T ss_pred             HHHHHHHHHHH-HHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHH------HHHHHHHHHHHhe
Confidence            66666777775 8889999999999999999999999999999999999999999999      9999999999875

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.69  E-value=3.7e-07  Score=85.64  Aligned_cols=139  Identities=19%  Similarity=0.254  Sum_probs=103.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhc------CCChHHHHHHHHHHHHHHHHHHHHhhccCCC-----------CcCCH
Q 017940            7 WKPLIAMIAVEFGFATVNIFLKKVLEE------GMNELVFITCRLLVATILLAPIGYFWERNSR-----------PKLTL   69 (363)
Q Consensus         7 ~~~~~~~l~~~~~~~~~~~~~k~~~~~------~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~-----------~~~~~   69 (363)
                      ..|.+++++++++|+...++.|...++      +.++.....+....+.++++|+....+....           ....+
T Consensus       193 ~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~  272 (350)
T PTZ00343        193 WLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTK  272 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccch
Confidence            469999999999999999999998763      2557767777778888888887764422110           00111


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHh
Q 017940           70 RILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLL  149 (363)
Q Consensus        70 ~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~  149 (363)
                      ......++.+.+...+.+.+.+++++++++...++...+.|+++.++++++++|+++..+      ++|.++++.|+++.
T Consensus       273 ~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~------~iG~~lii~Gv~lY  346 (350)
T PTZ00343        273 GIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLG------YLGMAVAILGALLY  346 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHh------HHHHHHHHHHHHHH
Confidence            112222222222234555555579999999999999999999999999999999999999      99999999999886


Q ss_pred             hh
Q 017940          150 TL  151 (363)
Q Consensus       150 ~~  151 (363)
                      ..
T Consensus       347 s~  348 (350)
T PTZ00343        347 SL  348 (350)
T ss_pred             hh
Confidence            53

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.62  E-value=5.8e-07  Score=82.12  Aligned_cols=129  Identities=14%  Similarity=0.223  Sum_probs=103.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHH----HHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHH
Q 017940            7 WKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLL----VATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVG   82 (363)
Q Consensus         7 ~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~----~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   82 (363)
                      .+|+++.+++++.++......|..   +.+|...++....    .+.++..+.   + ++ .+ .+.+.....++.|++ 
T Consensus       151 ~~Gi~~~l~sg~~y~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~---~-~~-~~-~~~~~~~~~~~~Gi~-  220 (290)
T TIGR00776       151 KKGILLLLMSTIGYLVYVVVAKAF---GVDGLSVLLPQAIGMVIGGIIFNLGH---I-LA-KP-LKKYAILLNILPGLM-  220 (290)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHc---CCCcceehhHHHHHHHHHHHHHHHHH---h-cc-cc-hHHHHHHHHHHHHHH-
Confidence            689999999999999999999965   4888888655555    333333322   1 11 22 234455556668988 


Q ss_pred             HHHHHHHHHHHhh-ccCccchhhhcchhhHHHHHHHHHhCccccccccccCccce----ehhhHHHHhHHHhhh
Q 017940           83 TSLTQYFFLLGIQ-YTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKV----VGTLVCIGGAMLLTL  151 (363)
Q Consensus        83 ~~~~~~~~~~al~-~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~----~gi~~~~~Gv~l~~~  151 (363)
                      ..+.+.+|+.+.+ +.+++.++++.+..|+...+.+++++||+.++++      +    +|.++.+.|+.++..
T Consensus       221 ~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~------~~~~~iG~~lIi~~~~l~~~  288 (290)
T TIGR00776       221 WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKRE------MIAISVGIILIIIAANILGI  288 (290)
T ss_pred             HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcce------eehhHHHHHHHHHHHHHHhc
Confidence            5999999999999 9999999999999999999999999999999999      9    999999999988753

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.60  E-value=5.5e-07  Score=69.66  Aligned_cols=68  Identities=22%  Similarity=0.240  Sum_probs=62.7

Q ss_pred             HHHHHHHHHHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhh
Q 017940           77 FSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLT  150 (363)
Q Consensus        77 ~~g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~  150 (363)
                      ..+++++.+++.++..++++.|.+.+..+.++.++++.+++++++|||++.++      ++|+.+++.|+.++.
T Consensus        41 ~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~------~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         41 GLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRH------WCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHHh
Confidence            34446678899999999999999999999889999999999999999999999      999999999998875

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.59  E-value=1.4e-06  Score=79.26  Aligned_cols=134  Identities=16%  Similarity=0.248  Sum_probs=107.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHH-HHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHH
Q 017940            7 WKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFIT-CRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSL   85 (363)
Q Consensus         7 ~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~-~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   85 (363)
                      ..|.++.+++++.|+...+..|...  ..++..... +.+........+... ...+  ...+.+.+......|+++...
T Consensus       153 ~~g~~~~l~a~~~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~g~~~~~i  227 (292)
T COG0697         153 LLGLLLALAAALLWALYTALVKRLS--RLGPVTLALLLQLLLALLLLLLFFL-SGFG--APILSRAWLLLLYLGVFSTGL  227 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHHh-cccc--ccCCHHHHHHHHHHHHHHHHH
Confidence            4799999999999999999999775  366666665 444322222222221 1111  335678899999999998678


Q ss_pred             HHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhh
Q 017940           86 TQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTL  151 (363)
Q Consensus        86 ~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~  151 (363)
                      .+.+++++++..+++.++.+..+.|++..++++++++|+++..+      ++|+++.+.|+.+...
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~------~~G~~li~~g~~l~~~  287 (292)
T COG0697         228 AYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQ------LLGAALVVLGVLLASL  287 (292)
T ss_pred             HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999999999999      9999999999998874

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=98.58  E-value=3.2e-07  Score=81.72  Aligned_cols=277  Identities=13%  Similarity=0.139  Sum_probs=162.4

Q ss_pred             CChHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHH
Q 017940            5 NEWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTS   84 (363)
Q Consensus         5 ~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   84 (363)
                      +..+|.++++.+.++.|.+.++-|+...+           ...        .-.+......+.- +.  +....|.+.+.
T Consensus        18 d~~~G~~LaissS~~Ig~sfilkKkgl~r-----------~~~--------~~~ra~~gg~~yl-~~--~~Ww~G~ltm~   75 (335)
T KOG2922|consen   18 DNIIGLVLAISSSIFIGSSFILKKKGLKR-----------AGA--------SGLRAGEGGYGYL-KE--PLWWAGMLTMI   75 (335)
T ss_pred             CceeeeeehhhccEEEeeehhhhHHHHHH-----------Hhh--------hcccccCCCcchh-hh--HHHHHHHHHHH
Confidence            45578889999999999999999987663           111        0011111111111 22  34456777788


Q ss_pred             HHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCCcch
Q 017940           85 LTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQ  164 (363)
Q Consensus        85 ~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~~~~  164 (363)
                      ++..+.|.|..+.|++.++.+.++..++.++++..+++||++...      .+|+.+++.|-.++......+.+    -.
T Consensus        76 vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g------~lGc~l~v~Gst~iV~haP~e~~----i~  145 (335)
T KOG2922|consen   76 VGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLG------ILGCVLCVVGSTTIVIHAPKEQE----IE  145 (335)
T ss_pred             HHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhh------hhheeEEecccEEEEEecCcccc----cc
Confidence            889999999999999999999999999999999999999999999      99999999998877653322111    11


Q ss_pred             hhhhhhhhcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHH-hhhccCCCchhHHHHHHHHHHH-------HHHHHHHHh
Q 017940          165 AETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQS-YIGKRYPCKYSSTAILSLFGAI-------QAAILCLAT  236 (363)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~  236 (363)
                      +..+.-..-.+|     .. ......+.-.  ..+-....| +..+  .+.+.+.....+.++.       +...+-...
T Consensus       146 t~~el~~~~~~~-----~F-liy~~~iil~--~~il~~~~~p~~g~--tnilvyi~i~s~iGS~tV~svKalg~aiklt~  215 (335)
T KOG2922|consen  146 SVEEVWELATEP-----GF-LVYVIIIILI--VLILIFFYAPRYGQ--TNILVYIGICSLIGSLTVMSVKALGIAIKLTF  215 (335)
T ss_pred             cHHHHHHHhcCc-----cH-HHHHHHHHHH--HHHHheeecccccc--cceeehhhHhhhhcceeeeeHHHHHHHHHHHh
Confidence            111000001111     00 1111111111  111111111 1111  1333333333333221       111111122


Q ss_pred             cCCCcccccccchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhhhh-HHHHHHHHHHHHhCCCC--chh----hH
Q 017940          237 NRNHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPL-VQIMAAMFDIPLLHERL--HIG----SL  309 (363)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~-~pv~~~~~~~~~~~e~~--~~~----~~  309 (363)
                      .++ .+..  .+..|..++.+.. +.....-..++|++..+++.++++.++ -..++++-+.++|+|.-  +..    ..
T Consensus       216 ~g~-~ql~--~~~ty~~~l~~~~-~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~  291 (335)
T KOG2922|consen  216 SGN-NQLF--YPLTWIFLLVVAT-CVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGEL  291 (335)
T ss_pred             cCC-cccc--cHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHH
Confidence            221 2222  2244555444443 445677777899999999998887655 56777788888998853  333    45


Q ss_pred             HHHHHHHHHhhhheeccc
Q 017940          310 LGSITVIIGLYILLWGKN  327 (363)
Q Consensus       310 ~G~~li~~g~~l~~~~~~  327 (363)
                      .|...++.|+++....|.
T Consensus       292 ~Gf~ti~~G~flL~~~kd  309 (335)
T KOG2922|consen  292 CGFVTIFLGIFLLHRTKD  309 (335)
T ss_pred             HhHHHhhheeeEeeeecc
Confidence            688889999988854443

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.56  E-value=1.2e-06  Score=77.19  Aligned_cols=140  Identities=13%  Similarity=0.103  Sum_probs=114.1

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccc-cccchhHHHHHHHHHHHH
Q 017940          184 TFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWS-FKGKIEIISVLYAGIVGS  262 (363)
Q Consensus       184 ~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~  262 (363)
                      ..|+++++.|-+.|+..-.+.|-+.+-  ++.++..++.+.+............+....++ ...+..+......+.+ .
T Consensus         6 ~~Gil~~l~Ay~lwG~lp~y~kll~~~--~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l-i   82 (293)
T COG2962           6 RKGILLALLAYLLWGLLPLYFKLLEPL--PATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL-I   82 (293)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHccC--CHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH-H
Confidence            489999999999999998888776554  66899999999988887777766544222222 2244556666666665 4


Q ss_pred             HHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheecc
Q 017940          263 GLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGK  326 (363)
Q Consensus       263 ~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~  326 (363)
                      ......|.+|..+.....+|.=.+++|.+.+++|.++++|+++..|++..++..+|+....+..
T Consensus        83 ~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~  146 (293)
T COG2962          83 GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLL  146 (293)
T ss_pred             HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc
Confidence            4789999999999999999999999999999999999999999999999999999998776543

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=98.53  E-value=9.3e-07  Score=76.02  Aligned_cols=137  Identities=14%  Similarity=0.132  Sum_probs=118.3

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHH
Q 017940            6 EWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSL   85 (363)
Q Consensus         6 ~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   85 (363)
                      +..|..+++.+..+|+.+-+..|..-. ..+.-.-+..-+.++.++.+|+.....  ..--.++......+..|+++..+
T Consensus       146 Dp~Gv~~Al~AG~~Wa~YIv~G~r~g~-~~~g~~g~a~gm~vAaviv~Pig~~~a--g~~l~~p~ll~laLgvavlSSal  222 (292)
T COG5006         146 DPVGVALALGAGACWALYIVLGQRAGR-AEHGTAGVAVGMLVAALIVLPIGAAQA--GPALFSPSLLPLALGVAVLSSAL  222 (292)
T ss_pred             CHHHHHHHHHHhHHHHHHHHHcchhcc-cCCCchHHHHHHHHHHHHHhhhhhhhc--chhhcChHHHHHHHHHHHHhccc
Confidence            457999999999999999999998865 366666777889999999999986532  22335778888888999999999


Q ss_pred             HHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhh
Q 017940           86 TQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTL  151 (363)
Q Consensus        86 ~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~  151 (363)
                      .+.+-..+++..|...-+++.++.|.+..+.++++++|+++..|      |+++...+.+.+-...
T Consensus       223 PYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~q------wlaI~~ViaAsaG~~l  282 (292)
T COG5006         223 PYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQ------WLAIAAVIAASAGSTL  282 (292)
T ss_pred             chHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHH------HHHHHHHHHHHhcccc
Confidence            99999999999999999999999999999999999999999999      9999988877764443

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.52  E-value=1e-06  Score=68.18  Aligned_cols=66  Identities=18%  Similarity=0.160  Sum_probs=61.0

Q ss_pred             HHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhhe
Q 017940          258 GIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILL  323 (363)
Q Consensus       258 g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~  323 (363)
                      ++++.+.++.++..++++.+.+.+-.+..+.++.+.+++++++||+++..+++|..++++|+.+..
T Consensus        43 ~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         43 ALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            335567899999999999999999999999999999999999999999999999999999998765

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.40  E-value=3.9e-06  Score=66.54  Aligned_cols=119  Identities=18%  Similarity=0.240  Sum_probs=90.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHHHH
Q 017940            8 KPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLTQ   87 (363)
Q Consensus         8 ~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   87 (363)
                      +++++.++..++-+...++.|...++ .+....... .. .  .+  .. .  .     .    ....+..|++.+.+++
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~-~g~~~~~~~-~~-~--~~--~~-~--~-----~----p~~~i~lgl~~~~la~   62 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSR-LPLLSHAWD-FI-A--AL--LA-F--G-----L----ALRAVLLGLAGYALSM   62 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhh-CCCccchhH-HH-H--HH--HH-H--h-----c----cHHHHHHHHHHHHHHH
Confidence            47888999999999999999998774 443322111 10 0  00  00 0  0     0    0114566777789999


Q ss_pred             HHHHHHhhccCccchhhhcchhhHHHHHHHHH--hCccccccccccCccceehhhHHHHhHHHhhh
Q 017940           88 YFFLLGIQYTSATFACAFINMVPVITFVIALP--FGLETVDIKGISGKAKVVGTLVCIGGAMLLTL  151 (363)
Q Consensus        88 ~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l--~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~  151 (363)
                      .++..++++.+.+.+..+.+..++++.+.++.  +++|+++..+      ++|+++.+.|+.++..
T Consensus        63 ~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~------~iGi~lIi~GV~lv~~  122 (129)
T PRK02971         63 LCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKK------TLGVACIMLGVWLINL  122 (129)
T ss_pred             HHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHHHhcc
Confidence            99999999999999999999999888888885  8999999999      9999999999999874

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=98.14  E-value=4.5e-05  Score=70.38  Aligned_cols=142  Identities=15%  Similarity=0.062  Sum_probs=112.3

Q ss_pred             CChHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCCCcC--CHHHHHHHHHHHHHH
Q 017940            5 NEWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKL--TLRILFCLFFSAIVG   82 (363)
Q Consensus         5 ~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~   82 (363)
                      ++.+|-++++.+++++|.+.+.-+...+ +.++..+..+-.+.+.++..+.....++....+.  +++.....+.- .+.
T Consensus       165 ~~i~GDll~l~~a~lya~~nV~~E~~v~-~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~-~~~  242 (334)
T PF06027_consen  165 NPILGDLLALLGAILYAVSNVLEEKLVK-KAPRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGY-ALC  242 (334)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHhcc-cCCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHH-HHH
Confidence            5678999999999999999999999988 5888888888788888887777766666544333  44444333333 334


Q ss_pred             HHHHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcC
Q 017940           83 TSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKG  154 (363)
Q Consensus        83 ~~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~  154 (363)
                      .+..+.+.-..+++.++....+=.-+..++..+++++++++++++..      ++|.+++++|.++....+.
T Consensus       243 lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly------~~af~lIiiG~vvy~~~~~  308 (334)
T PF06027_consen  243 LFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLY------ILAFALIIIGFVVYNLAES  308 (334)
T ss_pred             HHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHH------HHHHHHHHHHhheEEccCC
Confidence            57777777888899999877766678899999999999999999999      9999999999999876443

Some of the sequences in this family are annotated as putative membrane proteins.

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=98.03  E-value=0.00016  Score=58.12  Aligned_cols=131  Identities=17%  Similarity=0.148  Sum_probs=98.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhHHHHHHHHHHHHHHHH
Q 017940          187 TIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGLCY  266 (363)
Q Consensus       187 ~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  266 (363)
                      .++++.++.+-++....+.++.++..+|+..+++.+..+.+.+..+....++.  .........|+..+ .|+ ......
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p~w~~l-GG~-lG~~~V   78 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRP--SLASLSSVPWWAYL-GGL-LGVFFV   78 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCChHHhc-cHH-HHHHHH
Confidence            57889999999999999999999866799999999999999988888776653  22211222344333 444 344566


Q ss_pred             HHhhhhcccCCcchhhhhhhh-HHHHHHHHHHH----HhCCCCchhhHHHHHHHHHHhhh
Q 017940          267 VGLTWCVKKKGPVFTAAFSPL-VQIMAAMFDIP----LLHERLHIGSLLGSITVIIGLYI  321 (363)
Q Consensus       267 ~~~~~a~~~~~a~~~s~~~~~-~pv~~~~~~~~----~~~e~~~~~~~~G~~li~~g~~l  321 (363)
                      ....+.+++.+++....+... |-+.+.+++.+    .-++++++.+++|.+++++|+++
T Consensus        79 ~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   79 LSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            667788899998887776544 77778888885    23578899999999999999864

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=97.97  E-value=2.4e-06  Score=74.06  Aligned_cols=138  Identities=12%  Similarity=0.119  Sum_probs=105.1

Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhHHHHHHHHHHH
Q 017940          182 RWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVG  261 (363)
Q Consensus       182 ~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  261 (363)
                      ....|..+..++ ..+....+..++....  ||......+++.-..+..|+.+.....  .+.....+.|+.  .=|+. 
T Consensus        35 ~p~~gl~l~~vs-~ff~~~~vv~t~~~e~--~p~e~a~~r~l~~mlit~pcliy~~~~--v~gp~g~R~~Li--LRg~m-  106 (346)
T KOG4510|consen   35 KPNLGLLLLTVS-YFFNSCMVVSTKVLEN--DPMELASFRLLVRMLITYPCLIYYMQP--VIGPEGKRKWLI--LRGFM-  106 (346)
T ss_pred             CCccCceehhhH-HHHhhHHHhhhhhhcc--ChhHhhhhhhhhehhhhheEEEEEeee--eecCCCcEEEEE--eehhh-
Confidence            445888888888 8888888888888776  677888777777776666665543322  122222233332  23333 


Q ss_pred             HHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheeccc
Q 017940          262 SGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKN  327 (363)
Q Consensus       262 ~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~  327 (363)
                      +..+..+.+++.++.+.+-+.++....|+++.++++++++|+.|..+.+|..+.+.|++++.+..-
T Consensus       107 G~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpF  172 (346)
T KOG4510|consen  107 GFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPF  172 (346)
T ss_pred             hhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCc
Confidence            335677777999999999999999999999999999999999999999999999999999986543

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=97.96  E-value=0.0033  Score=57.34  Aligned_cols=302  Identities=15%  Similarity=0.110  Sum_probs=180.1

Q ss_pred             CChHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccC----CCCcCCHHHHHHHHHHHH
Q 017940            5 NEWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERN----SRPKLTLRILFCLFFSAI   80 (363)
Q Consensus         5 ~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~----~~~~~~~~~~~~~~~~g~   80 (363)
                      +-..|+++..++.++-|...+-.|+.-+  .+.-..=.+...++.+++-.+.-...-.    .....+...+....+.|+
T Consensus         4 ~ii~Gii~h~iGg~~~~sfy~P~kkvk~--WsWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~   81 (344)
T PF06379_consen    4 AIILGIIFHAIGGFASGSFYVPFKKVKG--WSWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFGV   81 (344)
T ss_pred             hHHHHHHHHHHHHHHhhhhccchhhcCC--ccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHH
Confidence            4568999999999999999998887533  5543333334444433332222111111    112245677888888898


Q ss_pred             HHHHHHHHHHHHHhhccCccchh-hhcchhhHHHHHHHHHhCcccc-ccccccCccceehhhHHHHhHHHhhhhcCCCcc
Q 017940           81 VGTSLTQYFFLLGIQYTSATFAC-AFINMVPVITFVIALPFGLETV-DIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLF  158 (363)
Q Consensus        81 ~~~~~~~~~~~~al~~~~~~~~~-ii~~~~pv~~~lla~l~~~e~~-~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~  158 (363)
                      + -.++...|-.+++|+..+... +...+.-++..++-.++.++-- -..++.+...++|++++++|+.+....+...+.
T Consensus        82 l-WGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke~  160 (344)
T PF06379_consen   82 L-WGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMKEK  160 (344)
T ss_pred             H-HhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhhhh
Confidence            8 588899999999999999874 4467888888888777654310 011223445599999999999998764322111


Q ss_pred             CCCcchhhhhhhhhcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhh-------ccCCCchhH----HHHHHHHHHH
Q 017940          159 DHSYSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIG-------KRYPCKYSS----TAILSLFGAI  227 (363)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~-------~~~~~~~~~----~~~~~~~~~~  227 (363)
                      .      .        +.+.++.+..+|.++++++++.-|..++-...-.       +...+|+..    ....+..+.+
T Consensus       161 ~------~--------~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~GGf~  226 (344)
T PF06379_consen  161 E------L--------GEEAKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVVLWGGFI  226 (344)
T ss_pred             h------h--------ccchhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhhhhhHHH
Confidence            0      0        0022345667999999999999888877654221       111122221    2233344455


Q ss_pred             HHHHHHHHhc---CCCc---ccccccc---hhHHHHHHHHHHHHHHHHHHhhhhcccCCc----chhhhhhhhHHHHHHH
Q 017940          228 QAAILCLATN---RNHS---AWSFKGK---IEIISVLYAGIVGSGLCYVGLTWCVKKKGP----VFTAAFSPLVQIMAAM  294 (363)
Q Consensus       228 ~~~~~~~~~~---~~~~---~~~~~~~---~~~~~~~~~g~~~~~~~~~~~~~a~~~~~a----~~~s~~~~~~pv~~~~  294 (363)
                      .-....++..   ++..   +.....+   ......+..|.+ =..++++|-++-.+.++    .--.+.+.+..+++-+
T Consensus       227 tN~~yc~~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~l-Wy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~snv  305 (344)
T PF06379_consen  227 TNLIYCLILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGVL-WYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFSNV  305 (344)
T ss_pred             HHHHHHHHHHhhcCCCccccccccccchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHH
Confidence            5555554431   2222   1111111   122333344443 33566677677666663    4455678888999999


Q ss_pred             HHHHHhCCC------CchhhHHHHHHHHHHhhhheec
Q 017940          295 FDIPLLHER------LHIGSLLGSITVIIGLYILLWG  325 (363)
Q Consensus       295 ~~~~~~~e~------~~~~~~~G~~li~~g~~l~~~~  325 (363)
                      ++. .++|.      .-..-++|+.+++.++.++-+.
T Consensus       306 wGl-~lkEWKg~s~kt~~vl~~G~~vlI~s~~ivG~G  341 (344)
T PF06379_consen  306 WGL-ILKEWKGASKKTIRVLVLGIAVLILSVVIVGYG  341 (344)
T ss_pred             HHH-HHHHhccCCcccHHHHHHHHHHHHHHHHHHhcc
Confidence            997 56663      2344568888888888877554

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=97.96  E-value=8.2e-05  Score=66.09  Aligned_cols=116  Identities=12%  Similarity=0.107  Sum_probs=90.2

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHH
Q 017940            6 EWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSL   85 (363)
Q Consensus         6 ~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   85 (363)
                      ..++++.++++++.+..+..+.|..   ++++....+-+..--.+.-.++....++    ....|....-++.|++ ...
T Consensus       136 ~~kgi~~Ll~stigy~~Y~~~~~~~---~~~~~~~~lPqaiGm~i~a~i~~~~~~~----~~~~k~~~~nil~G~~-w~i  207 (269)
T PF06800_consen  136 MKKGILALLISTIGYWIYSVIPKAF---HVSGWSAFLPQAIGMLIGAFIFNLFSKK----PFFEKKSWKNILTGLI-WGI  207 (269)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhc---CCChhHhHHHHHHHHHHHHHHHhhcccc----cccccchHHhhHHHHH-HHH
Confidence            4679999999999999999998864   5788777766554444444444433211    1233445556777888 689


Q ss_pred             HHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCcccccccc
Q 017940           86 TQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKG  129 (363)
Q Consensus        86 ~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~  129 (363)
                      ++.+++.+.+....+.+-.+.++.+++..+.+.+++||+=++++
T Consensus       208 gnl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke  251 (269)
T PF06800_consen  208 GNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKE  251 (269)
T ss_pred             HHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhh
Confidence            99999999999999999999999999999999999999977776

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.91  E-value=5.9e-05  Score=58.74  Aligned_cols=68  Identities=24%  Similarity=0.383  Sum_probs=58.3

Q ss_pred             HHHHHHHHHHhhhhcccCCcchhhhh-hhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheecc
Q 017940          259 IVGSGLCYVGLTWCVKKKGPVFTAAF-SPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGK  326 (363)
Q Consensus       259 ~~~~~~~~~~~~~a~~~~~a~~~s~~-~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~  326 (363)
                      ++..++++.++..++++.+.+.+=.+ ..+..+.+.+.+++++||++++.+++|+.++++|++..+...
T Consensus        37 i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         37 LVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence            34456789999999999998776555 468999999999999999999999999999999999886544

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.88  E-value=0.00036  Score=64.28  Aligned_cols=128  Identities=17%  Similarity=0.052  Sum_probs=95.2

Q ss_pred             HHHHHHHHHhhhccCC-C--chhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhHHHHHHHHHHHHHHHHHHhhhhc
Q 017940          197 WASWFPIQSYIGKRYP-C--KYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCV  273 (363)
Q Consensus       197 ~a~~~i~~k~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~  273 (363)
                      +..+.+.+++..++.. .  |..+++.++....+...+.......+..     ....+...+..++ ....+..+.+.++
T Consensus        12 ~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~-~~~~~~~~~~~al   85 (303)
T PF08449_consen   12 CCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPKS-----RKIPLKKYAILSF-LFFLASVLSNAAL   85 (303)
T ss_pred             HHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccCC-----CcChHHHHHHHHH-HHHHHHHHHHHHH
Confidence            3345566777765522 3  6778888888888777766655441111     1123333444444 3567778889999


Q ss_pred             ccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheecccccc
Q 017940          274 KKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKNKEM  330 (363)
Q Consensus       274 ~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~~  330 (363)
                      ++++.....++....|+.+++++++++|++.+..++++++++.+|+.+....+.++.
T Consensus        86 ~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~  142 (303)
T PF08449_consen   86 KYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSS  142 (303)
T ss_pred             HhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccc
Confidence            999999999999999999999999999999999999999999999999987665443

; GO: 0055085 transmembrane transport

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.79  E-value=0.00013  Score=56.16  Aligned_cols=67  Identities=10%  Similarity=0.158  Sum_probs=57.1

Q ss_pred             HHHHHHHHHhhhhcccCCcchhhhh-hhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheecc
Q 017940          260 VGSGLCYVGLTWCVKKKGPVFTAAF-SPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGK  326 (363)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~a~~~s~~-~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~  326 (363)
                      +..+.++.++..++++.+.+.+=.+ ..+..+.+.+.++++|||++++.+++|+.++++|++..+...
T Consensus        38 ~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         38 ICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            3456788888999999988766554 568889999999999999999999999999999999986544

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.76  E-value=0.00088  Score=53.91  Aligned_cols=139  Identities=15%  Similarity=0.141  Sum_probs=95.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhHHHHHHHHHHHHHH
Q 017940          185 FGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGL  264 (363)
Q Consensus       185 ~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  264 (363)
                      ...+.+++++.+-.+..-.+.++.+...+|.......+..+.+.+..+.+..++ .+.+.......|+..+ -|.++ .+
T Consensus         5 l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~-~~~~a~~~~~pwW~~~-GG~lG-a~   81 (150)
T COG3238           5 LYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQG-HPGLAAVASAPWWAWI-GGLLG-AI   81 (150)
T ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcC-CCchhhccCCchHHHH-ccchh-hh
Confidence            567889999999999999999999887789999999999999988888877433 3333322333444332 22332 22


Q ss_pred             HHHHhhhhcccCCcch-hhhhhhhHHHHHHHHHHHHhC----CCCchhhHHHHHHHHHHhhhheecc
Q 017940          265 CYVGLTWCVKKKGPVF-TAAFSPLVQIMAAMFDIPLLH----ERLHIGSLLGSITVIIGLYILLWGK  326 (363)
Q Consensus       265 ~~~~~~~a~~~~~a~~-~s~~~~~~pv~~~~~~~~~~~----e~~~~~~~~G~~li~~g~~l~~~~~  326 (363)
                      --+.-.....+.+++. ...+..-|-+.+.+++.+=+.    .+++..+++|++++++|+++..+++
T Consensus        82 ~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~~  148 (150)
T COG3238          82 FVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRFG  148 (150)
T ss_pred             hhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcccc
Confidence            2223334556666544 444556677888888876443    5789999999999999966665443

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=97.66  E-value=0.00027  Score=64.61  Aligned_cols=121  Identities=16%  Similarity=0.166  Sum_probs=87.6

Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHhhhccCCC-chhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhHHHHHHHHHH
Q 017940          182 RWTFGTIALTVGTLLWASWFPIQSYIGKRYPC-KYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIV  260 (363)
Q Consensus       182 ~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  260 (363)
                      ++..|..+++.++++.+....++|+-..+.+. +...                   ..+  ..+......|+.    |.+
T Consensus         4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~-------------------~~~--~~~~l~~~~W~~----G~~   58 (300)
T PF05653_consen    4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRA-------------------GSG--GRSYLRRPLWWI----GLL   58 (300)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc-------------------cch--hhHHHhhHHHHH----HHH
Confidence            45689999999999999999999987665321 0000                   000  000001112322    222


Q ss_pred             HHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheeccc
Q 017940          261 GSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKN  327 (363)
Q Consensus       261 ~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~  327 (363)
                      ...++..+.+.|....+++.++++..+..++..+++..+++|+++..+++|+.+++.|..+......
T Consensus        59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~  125 (300)
T PF05653_consen   59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAP  125 (300)
T ss_pred             HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCC
Confidence            3345556667788889999999999999999999999999999999999999999999988765443

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.53  E-value=0.0003  Score=54.08  Aligned_cols=66  Identities=15%  Similarity=0.322  Sum_probs=59.4

Q ss_pred             HHHHHHHHHHHHHHhhccCccchhhh-cchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhh
Q 017940           80 IVGTSLTQYFFLLGIQYTSATFACAF-INMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTL  151 (363)
Q Consensus        80 ~~~~~~~~~~~~~al~~~~~~~~~ii-~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~  151 (363)
                      +.++.+++.++..++++.|.+.+..+ ..+..+.+.++++++++|+++..+      ++|+.+.++|++++-.
T Consensus        37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~------~~gi~lIi~GVi~l~l  103 (110)
T PRK09541         37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPA------IIGMMLICAGVLVINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHHhc
Confidence            44467888999999999999999776 668999999999999999999999      9999999999999864

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.52  E-value=0.00023  Score=55.45  Aligned_cols=67  Identities=15%  Similarity=0.215  Sum_probs=60.0

Q ss_pred             HHHHHHHHHHHHHHHhhccCccchhhh-cchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhh
Q 017940           79 AIVGTSLTQYFFLLGIQYTSATFACAF-INMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTL  151 (363)
Q Consensus        79 g~~~~~~~~~~~~~al~~~~~~~~~ii-~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~  151 (363)
                      .+..+.++++++..++++.|.+.+..+ .....+.+.+++.++++|+++..+      ++|+.+.+.|++++-.
T Consensus        36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~------~~gi~lIi~GVi~l~l  103 (120)
T PRK10452         36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMK------IAGLTTLVAGIVLIKS  103 (120)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHhhc
Confidence            344468889999999999999999777 579999999999999999999999      9999999999998864

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.50  E-value=0.00056  Score=51.55  Aligned_cols=65  Identities=23%  Similarity=0.276  Sum_probs=56.5

Q ss_pred             HHHHHHHhhhhcccCCcch-hhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheecc
Q 017940          262 SGLCYVGLTWCVKKKGPVF-TAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGK  326 (363)
Q Consensus       262 ~~~~~~~~~~a~~~~~a~~-~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~  326 (363)
                      ...+|.+...++|+.+... .+...-+..+.+.+.++++|||+.++.+++|..++++|+...+...
T Consensus        40 ~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~s  105 (106)
T COG2076          40 YGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLGS  105 (106)
T ss_pred             HHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhcC
Confidence            4578888899999988654 5667888999999999999999999999999999999999887543

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.49  E-value=0.00027  Score=53.20  Aligned_cols=65  Identities=22%  Similarity=0.285  Sum_probs=58.4

Q ss_pred             HHHHHHHHHHHHHhhccCccchhhh-cchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhh
Q 017940           81 VGTSLTQYFFLLGIQYTSATFACAF-INMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTL  151 (363)
Q Consensus        81 ~~~~~~~~~~~~al~~~~~~~~~ii-~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~  151 (363)
                      +++.+++.++-.+++++|.+.+..+ ...-.+.+.+.++++++|+++..+      ++++.+.+.|++.+-.
T Consensus        38 v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~------~~gl~LiiaGvi~Lk~  103 (106)
T COG2076          38 VGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIK------LLGLALILAGVIGLKL  103 (106)
T ss_pred             HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHH------HHHHHHHHHHHHHhhh
Confidence            3467889999999999999998555 779999999999999999999999      9999999999998754

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.46  E-value=0.003  Score=48.37  Aligned_cols=63  Identities=14%  Similarity=0.166  Sum_probs=54.5

Q ss_pred             HHHHHHHHhhhhcccCCcchh-hhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhhe
Q 017940          261 GSGLCYVGLTWCVKKKGPVFT-AAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILL  323 (363)
Q Consensus       261 ~~~~~~~~~~~a~~~~~a~~~-s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~  323 (363)
                      ....++.+...++|+.+.+.+ ++...+..+.+.+.+++++||++++.+++|+.+++.|+...+
T Consensus        44 ~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         44 AVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            346788899999999987554 555678889999999999999999999999999999998864

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=97.45  E-value=0.00031  Score=53.87  Aligned_cols=110  Identities=17%  Similarity=0.267  Sum_probs=76.5

Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017940           14 IAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLG   93 (363)
Q Consensus        14 l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a   93 (363)
                      ++..++||...++.|.... +.++..-.. |..-....     ++        .+++.+. .+++    .-.+...|+..
T Consensus         2 l~Vg~~WG~Tnpfik~g~~-~~~~~~~~~-~~~~~~~~-----Ll--------~n~~y~i-pf~l----Nq~GSv~f~~~   61 (113)
T PF10639_consen    2 LLVGILWGCTNPFIKRGSS-GLEKVKASL-QLLQEIKF-----LL--------LNPKYII-PFLL----NQSGSVLFFLL   61 (113)
T ss_pred             eeehHHhcCchHHHHHHHh-hcCCccchH-HHHHHHHH-----HH--------HhHHHHH-HHHH----HHHHHHHHHHH
Confidence            4568999999999999877 455433321 32111111     00        1122222 2222    34556778899


Q ss_pred             hhccCccchhhh-cchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHh
Q 017940           94 IQYTSATFACAF-INMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLL  149 (363)
Q Consensus        94 l~~~~~~~~~ii-~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~  149 (363)
                      ++..+.+.+..+ +++.-++|++.++++.+|..+++.      ++|+.+.+.|+.+.
T Consensus        62 L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~------~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   62 LGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRT------WLGMALILAGVALC  112 (113)
T ss_pred             HhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhH------HHHHHHHHcCeeee
Confidence            999999999888 589999999999888888888888      99999999998753

Many members are annotated as potential transmembrane proteins.

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.45  E-value=0.001  Score=50.88  Aligned_cols=63  Identities=11%  Similarity=0.101  Sum_probs=56.7

Q ss_pred             HHHHHHHHHHHHHhhccCccchhhh-cchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHh
Q 017940           81 VGTSLTQYFFLLGIQYTSATFACAF-INMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLL  149 (363)
Q Consensus        81 ~~~~~~~~~~~~al~~~~~~~~~ii-~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~  149 (363)
                      .++.+++++...+++++|.+.+..+ .....+.+.++++++++|+++..+      ++|+.+.+.|+..+
T Consensus        43 ~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~------~~gi~lIi~GVi~l  106 (109)
T PRK10650         43 AAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKG------WIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHHHh
Confidence            3367889999999999999999555 669999999999999999999999      99999999999876

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=97.43  E-value=0.00047  Score=62.95  Aligned_cols=139  Identities=22%  Similarity=0.241  Sum_probs=112.7

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHhh---cCCChHHHHHHHHHHHHHHHH-HHHHhhccCCC---C--cCCHHHHHHHH
Q 017940            6 EWKPLIAMIAVEFGFATVNIFLKKVLE---EGMNELVFITCRLLVATILLA-PIGYFWERNSR---P--KLTLRILFCLF   76 (363)
Q Consensus         6 ~~~~~~~~l~~~~~~~~~~~~~k~~~~---~~~~~~~~~~~r~~~~~i~l~-~~~~~~~~~~~---~--~~~~~~~~~~~   76 (363)
                      +..|.+.++.+.+..++..++.|..+.   ..++++.......-++.+.++ |+....+....   .  ..+...+. ..
T Consensus       161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~-~~  239 (316)
T KOG1441|consen  161 NLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLI-LL  239 (316)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHH-HH
Confidence            468999999999999999999999883   358899999888888888888 88766544332   1  23334333 33


Q ss_pred             HHHHHHHHHHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhh
Q 017940           77 FSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLY  152 (363)
Q Consensus        77 ~~g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~  152 (363)
                      +..++ ..+.|...|..++.+++-..++...+--+++...+++++++++++.+      ..|.++++.|+.+-...
T Consensus       240 ~~sv~-~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n------~~G~~iai~Gv~~Y~~~  308 (316)
T KOG1441|consen  240 LNSVL-AFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLN------ALGYAIAILGVFLYSRA  308 (316)
T ss_pred             HHHHH-HHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhh------HHHHHHHHHHHHHHHHH
Confidence            34466 47778888999999999999999988888888999999999999999      99999999999987753

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.42  E-value=0.00045  Score=52.57  Aligned_cols=66  Identities=11%  Similarity=0.101  Sum_probs=58.6

Q ss_pred             HHHHHHHHHHHHHHhhccCccchhhh-cchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhh
Q 017940           80 IVGTSLTQYFFLLGIQYTSATFACAF-INMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTL  151 (363)
Q Consensus        80 ~~~~~~~~~~~~~al~~~~~~~~~ii-~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~  151 (363)
                      +.++..++++...+++..|.+.+..+ .....+.+.+++.++++|++++.+      ++|+.+.+.|++.+-.
T Consensus        36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~------~~gi~lIi~GVv~l~l  102 (105)
T PRK11431         36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPAR------LLSLALIVAGIIGLKL  102 (105)
T ss_pred             HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHhhhc
Confidence            34468889999999999999999655 669999999999999999999999      9999999999998753

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.40  E-value=0.00091  Score=50.89  Aligned_cols=64  Identities=22%  Similarity=0.207  Sum_probs=55.4

Q ss_pred             HHHHHHHHhhhhcccCCcchh-hhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhhee
Q 017940          261 GSGLCYVGLTWCVKKKGPVFT-AAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLW  324 (363)
Q Consensus       261 ~~~~~~~~~~~a~~~~~a~~~-s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~  324 (363)
                      +...++.+...++|+.+.+.+ +...-+..+.+.+.+++++||++++.+++|+.++++|++..+.
T Consensus        38 ~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l  102 (105)
T PRK11431         38 AMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL  102 (105)
T ss_pred             HHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence            456788889999999987554 5556689999999999999999999999999999999998754

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.38  E-value=0.0014  Score=60.68  Aligned_cols=137  Identities=13%  Similarity=0.119  Sum_probs=92.6

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHH-----HhcCCC-cccccccchhHHHHHH
Q 017940          183 WTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCL-----ATNRNH-SAWSFKGKIEIISVLY  256 (363)
Q Consensus       183 ~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~~~~~~~~~  256 (363)
                      ...|+++.+++++||+.+.+-.|+ .++. + ++.. |. ..+. +...+..     +..++. ......+...+...+.
T Consensus         5 ~~~G~~~~~i~~~~~GS~~~p~K~-~k~w-~-wE~~-W~-v~gi-~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l   78 (345)
T PRK13499          5 IILGIIWHLIGGASSGSFYAPFKK-VKKW-S-WETM-WS-VGGI-FSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFL   78 (345)
T ss_pred             hHHHHHHHHHHHHHhhcccccccc-cCCC-c-hhHH-HH-HHHH-HHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHH
Confidence            458999999999999999999998 4442 3 4444 43 2222 2222111     111111 1122223445555556


Q ss_pred             HHHHHHHHHHHHhhhhcccCCcchhhhh-hhhHHHHHHHHHHHHhCCCC---c----hhhHHHHHHHHHHhhhheecc
Q 017940          257 AGIVGSGLCYVGLTWCVKKKGPVFTAAF-SPLVQIMAAMFDIPLLHERL---H----IGSLLGSITVIIGLYILLWGK  326 (363)
Q Consensus       257 ~g~~~~~~~~~~~~~a~~~~~a~~~s~~-~~~~pv~~~~~~~~~~~e~~---~----~~~~~G~~li~~g~~l~~~~~  326 (363)
                      .|++- .+++..+..++++.+.+...++ .-++-+.+.+++.+++||..   +    ..-.+|.+++++|+.+..+.-
T Consensus        79 ~G~~W-~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag  155 (345)
T PRK13499         79 FGALW-GIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAG  155 (345)
T ss_pred             HHHHH-HhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence            66654 5799999999999999888777 56788999999999999765   2    235679999999999998744

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.34  E-value=0.0029  Score=50.93  Aligned_cols=130  Identities=15%  Similarity=0.169  Sum_probs=94.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCC-hHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHHHHH
Q 017940           10 LIAMIAVEFGFATVNIFLKKVLEEGMN-ELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLTQY   88 (363)
Q Consensus        10 ~~~~l~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   88 (363)
                      .++++++..+-+....+.....+. .. |...+++.+..+.+.+..+....+++.....+ +.-++...-|++| ...-.
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~~~-~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~-~~p~w~~lGG~lG-~~~V~   79 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLGKA-LGSPLVASFISFGVGFILLLIILLITGRPSLASLS-SVPWWAYLGGLLG-VFFVL   79 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH-hCccHHHHHHHHHHHHHHHHHHHHHhcccccchhc-cCChHHhccHHHH-HHHHH
Confidence            466777777788888777777664 55 99999999999999998888877654222222 2233344577776 77778


Q ss_pred             HHHHHhhccCccchhhh-cchhhHHHHHHHHH----hCccccccccccCccceehhhHHHHhHHH
Q 017940           89 FFLLGIQYTSATFACAF-INMVPVITFVIALP----FGLETVDIKGISGKAKVVGTLVCIGGAML  148 (363)
Q Consensus        89 ~~~~al~~~~~~~~~ii-~~~~pv~~~lla~l----~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l  148 (363)
                      +.......++++.+..+ ..-+-+...++-.+    .-+++++..+      ++|+++.+.|+.+
T Consensus        80 ~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r------~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   80 SNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRR------ILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHH------HHHHHHHHHHHhC
Confidence            88899999999888666 34556666666664    3567788888      9999999999864

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=97.08  E-value=0.0019  Score=57.36  Aligned_cols=78  Identities=13%  Similarity=0.179  Sum_probs=66.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheeccccc
Q 017940          251 IISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKNKE  329 (363)
Q Consensus       251 ~~~~~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~  329 (363)
                      ...+..-+++ ..+...+.+.++++.+|+...++..+..+++.++++++++.+++..||++..+.++|+.+........
T Consensus        17 ~~~~~vPA~l-Y~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~   94 (244)
T PF04142_consen   17 TLKLAVPALL-YAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS   94 (244)
T ss_pred             HHHHHHHHHH-HHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence            3344444443 55777888899999999999999999999999999999999999999999999999999988766544

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=97.06  E-value=0.0034  Score=57.54  Aligned_cols=143  Identities=11%  Similarity=0.160  Sum_probs=108.3

Q ss_pred             CChHHHHHHHHHHHHHHHHHHHHHHHhhcC---CChHHHHHHHHHHHHHHHHHHHHhhccCCC---CcCCHHHHHHHHHH
Q 017940            5 NEWKPLIAMIAVEFGFATVNIFLKKVLEEG---MNELVFITCRLLVATILLAPIGYFWERNSR---PKLTLRILFCLFFS   78 (363)
Q Consensus         5 ~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~---~~~~~~~~~~~~~~   78 (363)
                      |...|-++++++++++|.+.++.|.-.+++   ++--.+..+-.++..++++|..+..+.-+.   .-.+..+....++.
T Consensus       244 ~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~~  323 (416)
T KOG2765|consen  244 RPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVVFN  323 (416)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeeeHh
Confidence            346899999999999999999999877632   443333334455666666654443322222   22344556667888


Q ss_pred             HHHHHHHHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhc
Q 017940           79 AIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYK  153 (363)
Q Consensus        79 g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~  153 (363)
                      |+++.+++.+++..|.-.+++-.+++-..++.-..++.-.++.+.++++.+      ++|.+.+++|.+++...+
T Consensus       324 ~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~------iiGsi~Ifv~Fv~vn~~~  392 (416)
T KOG2765|consen  324 NLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALY------IIGSIPIFVGFVIVNISS  392 (416)
T ss_pred             hHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHhheeccc
Confidence            999999999999999999999999988887777777777888888899999      999999999999987644

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=97.04  E-value=0.0028  Score=47.27  Aligned_cols=55  Identities=22%  Similarity=0.260  Sum_probs=33.8

Q ss_pred             HHHHHHHHHHHHHhhccCccchhhh-cchhhHHHHHHHHHhCccccccccccCccceehhhH
Q 017940           81 VGTSLTQYFFLLGIQYTSATFACAF-INMVPVITFVIALPFGLETVDIKGISGKAKVVGTLV  141 (363)
Q Consensus        81 ~~~~~~~~~~~~al~~~~~~~~~ii-~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~  141 (363)
                      ..+..++.++..+++++|.+.+..+ ..+..+.+.+.+.++++|+++..+      ++|+.+
T Consensus        37 ~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~------~~gi~l   92 (93)
T PF00893_consen   37 VGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSK------WLGIGL   92 (93)
T ss_dssp             HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------------HHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------Hhheee
Confidence            3468889999999999999999665 569999999999999999999999      887765

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=96.95  E-value=0.00068  Score=58.48  Aligned_cols=132  Identities=17%  Similarity=0.175  Sum_probs=96.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhHHHHHHHHHHHHHHH
Q 017940          186 GTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGLC  265 (363)
Q Consensus       186 G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  265 (363)
                      ..+++++=++.|+..-....+...   .|.+......+.+.++.+...++..+   ..   +...+..-+..|++-+ ++
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~GG---~p~qQ~lGtT~GALifaiiv~~~~~p---~~---T~~~~iv~~isG~~Ws-~G   72 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKFGG---KPYQQTLGTTLGALIFAIIVFLFVSP---EL---TLTIFIVGFISGAFWS-FG   72 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeecCC---ChhHhhhhccHHHHHHHHHHheeecC---cc---chhhHHHHHHhhhHhh-hh
Confidence            467889999999987776655543   46777777777777776666555321   11   2234555556666655 68


Q ss_pred             HHHhhhhcccCCcchhhhhhh-hHHHHHHHHHHHHhCCCCchhhHH----HHHHHHHHhhhheeccc
Q 017940          266 YVGLTWCVKKKGPVFTAAFSP-LVQIMAAMFDIPLLHERLHIGSLL----GSITVIIGLYILLWGKN  327 (363)
Q Consensus       266 ~~~~~~a~~~~~a~~~s~~~~-~~pv~~~~~~~~~~~e~~~~~~~~----G~~li~~g~~l~~~~~~  327 (363)
                      +..++++++..+.+++.+++. .+-+-+.+++++.|+|..+..+.+    ..++++.|+++..++++
T Consensus        73 Q~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~  139 (288)
T COG4975          73 QANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDR  139 (288)
T ss_pred             hhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecc
Confidence            999999999999999999854 677788899999999999887763    56778888888777665

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.94  E-value=0.0022  Score=47.81  Aligned_cols=55  Identities=22%  Similarity=0.274  Sum_probs=34.0

Q ss_pred             HHHHHHHHhhhhcccCCcchhhh-hhhhHHHHHHHHHHHHhCCCCchhhHHHHHHH
Q 017940          261 GSGLCYVGLTWCVKKKGPVFTAA-FSPLVQIMAAMFDIPLLHERLHIGSLLGSITV  315 (363)
Q Consensus       261 ~~~~~~~~~~~a~~~~~a~~~s~-~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li  315 (363)
                      +...++.++..++|+.+.+.+=. ...+..+...+.+.+++||++|+.+++|+.++
T Consensus        38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            45678899999999999888744 45699999999999999999999999999875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=96.93  E-value=0.0043  Score=54.93  Aligned_cols=132  Identities=14%  Similarity=0.032  Sum_probs=83.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhHHHHHHHHHHHHHHH
Q 017940          186 GTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGLC  265 (363)
Q Consensus       186 G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  265 (363)
                      |.+.+++|+++++...+=.|+.-..  |++....+.+....+..+...+..+.  +.+.      .+.++ .|.+ -..+
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~~~g--Dg~~fQw~~~~~i~~~g~~v~~~~~~--p~f~------p~aml-gG~l-W~~g   68 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKFDTG--DGFFFQWVMCSGIFLVGLVVNLILGF--PPFY------PWAML-GGAL-WATG   68 (254)
T ss_pred             CchhHHHHHHHhcccceeeEeccCC--CcHHHHHHHHHHHHHHHHHHHHhcCC--Ccce------eHHHh-hhhh-hhcC
Confidence            5678889999999998888887655  77777777777766666666555432  1221      11111 1111 2234


Q ss_pred             HHHhhhhcccCCcchhhhhh-hhHHHHHHHHHHH-HhCCC---C--chhhHHHHHHHHHHhhhheeccccc
Q 017940          266 YVGLTWCVKKKGPVFTAAFS-PLVQIMAAMFDIP-LLHER---L--HIGSLLGSITVIIGLYILLWGKNKE  329 (363)
Q Consensus       266 ~~~~~~a~~~~~a~~~s~~~-~~~pv~~~~~~~~-~~~e~---~--~~~~~~G~~li~~g~~l~~~~~~~~  329 (363)
                      ..+-.-.++.++.+..-.+. .++.+.+...+-+ +||+.   +  ....++|++++++|..++..-|.++
T Consensus        69 N~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~  139 (254)
T PF07857_consen   69 NILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEE  139 (254)
T ss_pred             ceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence            44445566777666555553 3467777776654 45442   2  6678899999999999887655544

The region concerned is approximately 280 residues long.

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=96.85  E-value=0.013  Score=51.96  Aligned_cols=191  Identities=10%  Similarity=0.023  Sum_probs=116.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHHHHH
Q 017940            9 PLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLTQY   88 (363)
Q Consensus         9 ~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   88 (363)
                      |++.++++++++|.+++-.|.. + .-|++.+-++......+.-+++...++   .++    -..+.++.|.+ .+.++.
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~-~-~gDg~~fQw~~~~~i~~~g~~v~~~~~---~p~----f~p~amlgG~l-W~~gN~   70 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKF-D-TGDGFFFQWVMCSGIFLVGLVVNLILG---FPP----FYPWAMLGGAL-WATGNI   70 (254)
T ss_pred             CchhHHHHHHHhcccceeeEec-c-CCCcHHHHHHHHHHHHHHHHHHHHhcC---CCc----ceeHHHhhhhh-hhcCce
Confidence            5688999999999999999965 4 257777777666555555555554432   222    24455666777 588999


Q ss_pred             HHHHHhhccCccchhhhcch-hhHHHHHHHHH-hCccccccccccCccceehhhHHHHhHHHhhhhcCCCccC-------
Q 017940           89 FFLLGIQYTSATFACAFINM-VPVITFVIALP-FGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFD-------  159 (363)
Q Consensus        89 ~~~~al~~~~~~~~~ii~~~-~pv~~~lla~l-~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~-------  159 (363)
                      +-.-.++.++.+....+-+. +-+.....+.+ +++++..... ..+.-++|++++++|..+...-+.+....       
T Consensus        71 ~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~-~~~Ln~~G~~l~~~~~~~f~fik~~~~~~~~~~~~~  149 (254)
T PF07857_consen   71 LVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPS-SPWLNYIGVALVLVSGIIFSFIKSEEKEPKKSSEET  149 (254)
T ss_pred             eehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccc-hhHHHHHHHHHHHHHHHheeeecCCCCCcccccccc
Confidence            99999999999999888665 44555454443 3444333221 22334788888888887776533222110       


Q ss_pred             CCcchhhhhhhhhc-CCCCC-------CCccchhhHHHHHHHHHHHHHHHHHHHhhhcc
Q 017940          160 HSYSQAETAINVMH-MHPTR-------KTERWTFGTIALTVGTLLWASWFPIQSYIGKR  210 (363)
Q Consensus       160 ~~~~~~~~~~~~~~-~~~~~-------~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~  210 (363)
                      +....+..+.+... .+.++       ...+...|..+++++++.|+...+=..+..++
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~S~vd~l~~~~~RivG~~LAv~aGvlyGs~fvPv~Yi~~~  208 (254)
T PF07857_consen  150 PLSIEDVIEIEDDSENSEDSSWVDELSPRKKRIVGIILAVFAGVLYGSNFVPVIYIQDH  208 (254)
T ss_pred             ccccccccccccccccccccccccccccccchhHhHHHHHHHHHHHhcccchHHHHHhC
Confidence            00000001000000 00011       11246689999999999999988877777665

The region concerned is approximately 280 residues long.

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=96.18  E-value=0.08  Score=47.50  Aligned_cols=140  Identities=14%  Similarity=0.144  Sum_probs=110.1

Q ss_pred             CChHHHHHHHHHHHHHHHHHHHHHHHhh-cCCChHHHHHHHHHHHHHHHHHHHHhhccCCCC-----cCCHHHHHHHHHH
Q 017940            5 NEWKPLIAMIAVEFGFATVNIFLKKVLE-EGMNELVFITCRLLVATILLAPIGYFWERNSRP-----KLTLRILFCLFFS   78 (363)
Q Consensus         5 ~~~~~~~~~l~~~~~~~~~~~~~k~~~~-~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~   78 (363)
                      +...|+.++....++=|.....-....+ .++++..+++.-.+...+.-........ ...+     +.+++.++.+++.
T Consensus       169 ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg-~~~~av~F~~~hp~~~~Di~l~  247 (327)
T KOG1581|consen  169 NSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQG-HLLPAVSFIKEHPDVAFDILLY  247 (327)
T ss_pred             CchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCC-CCchHHHHHHcChhHHHHHHHH
Confidence            5568999999999988888877776655 2578999999888888887776644332 2222     2356778888888


Q ss_pred             HHHHHHHHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhh
Q 017940           79 AIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLY  152 (363)
Q Consensus        79 g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~  152 (363)
                      ..++ ..++.+.++-++.-++-.-+.|..+-=++..+++.+.++.+++..|      |+|+.+.+.|+.+=.+.
T Consensus       248 s~~g-avGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q------~~g~~iVFg~i~l~~~~  314 (327)
T KOG1581|consen  248 STCG-AVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQ------WLGVLIVFGGIFLEILL  314 (327)
T ss_pred             HHhh-hhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhh------ccCeeeehHHHHHHHHH
Confidence            8887 7888888888887766666777777888999999999999999999      99999999999876553

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=96.12  E-value=0.016  Score=44.54  Aligned_cols=109  Identities=13%  Similarity=0.088  Sum_probs=74.1

Q ss_pred             HHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhHHHHHHHHHHHHHHHHHHhhh
Q 017940          192 VGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTW  271 (363)
Q Consensus       192 ~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  271 (363)
                      +-+++|+..+.+.||..+..++.-. .. + ...-...    ++.          .   |-..  ..++.+..+...|++
T Consensus         3 ~Vg~~WG~Tnpfik~g~~~~~~~~~-~~-~-~~~~~~~----Ll~----------n---~~y~--ipf~lNq~GSv~f~~   60 (113)
T PF10639_consen    3 LVGILWGCTNPFIKRGSSGLEKVKA-SL-Q-LLQEIKF----LLL----------N---PKYI--IPFLLNQSGSVLFFL   60 (113)
T ss_pred             eehHHhcCchHHHHHHHhhcCCccc-hH-H-HHHHHHH----HHH----------h---HHHH--HHHHHHHHHHHHHHH
Confidence            4478899999999999876432222 11 1 1111111    110          0   1111  122334566777888


Q ss_pred             hcccCCcchhhhhh-hhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhh
Q 017940          272 CVKKKGPVFTAAFS-PLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYIL  322 (363)
Q Consensus       272 a~~~~~a~~~s~~~-~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~  322 (363)
                      .+.+.+-+.+.++. .+.-+++++.++++.+|..+...++|+++++.|+.+.
T Consensus        61 ~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   61 LLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            99999999999985 8899999999988777788999999999999998764

Many members are annotated as potential transmembrane proteins.

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=96.06  E-value=0.32  Score=44.77  Aligned_cols=141  Identities=13%  Similarity=0.067  Sum_probs=93.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhccCC---CchhHHHHHHHHHHHHHHHHHHHhcCC--------CcccccccchhHHH
Q 017940          185 FGTIALTVGTLLWASWFPIQSYIGKRYP---CKYSSTAILSLFGAIQAAILCLATNRN--------HSAWSFKGKIEIIS  253 (363)
Q Consensus       185 ~G~~~~l~a~~~~a~~~i~~k~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~  253 (363)
                      .=.+..+...+.++......|+..++..   .|.+..+..-+.-.+++....+..++.        ........+.+...
T Consensus        15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk   94 (345)
T KOG2234|consen   15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK   94 (345)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence            3345555556666777777776665421   345555555556566665555554211        11111112112222


Q ss_pred             HHHHHHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheecc
Q 017940          254 VLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGK  326 (363)
Q Consensus       254 ~~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~  326 (363)
                      +..-++ ...+..-+++.+..+.+|+...+...+..+-+.++..++++++++..||...++.+.|+.++....
T Consensus        95 ~~vPa~-iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~  166 (345)
T KOG2234|consen   95 VSVPAL-IYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPS  166 (345)
T ss_pred             HHHHHH-HHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccC
Confidence            222222 244555688899999999999999999999999999999999999999999999999999998443

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.91  E-value=0.11  Score=42.02  Aligned_cols=138  Identities=13%  Similarity=0.082  Sum_probs=83.2

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHH
Q 017940            6 EWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSL   85 (363)
Q Consensus         6 ~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   85 (363)
                      .....+..+++..+-.....+.....+..-+|+.-.++.+.++.+++..+.+.++++......++.-+|...-|++| ..
T Consensus         3 ~~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lG-a~   81 (150)
T COG3238           3 MYLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLG-AI   81 (150)
T ss_pred             cHHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchh-hh
Confidence            35667777777777777777777666643359999999999999988888877444332222233344445555554 44


Q ss_pred             HHHHHHHHhhccCccchhh-hcchhhHHHHHHHHHhC----ccccccccccCccceehhhHHHHhHHHhh
Q 017940           86 TQYFFLLGIQYTSATFACA-FINMVPVITFVIALPFG----LETVDIKGISGKAKVVGTLVCIGGAMLLT  150 (363)
Q Consensus        86 ~~~~~~~al~~~~~~~~~i-i~~~~pv~~~lla~l~~----~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~  150 (363)
                      +-+..........++.... +..-+-+...++-.+=+    +.+++..+      ++|+++.++|+.++.
T Consensus        82 ~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r------~lgi~L~l~gil~~~  145 (150)
T COG3238          82 FVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPR------ILGILLVLAGILLAR  145 (150)
T ss_pred             hhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHH------HHHHHHHHHHHHHhc
Confidence            4433444445555544433 33444444444433321    24455555      999999999955553

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=95.55  E-value=0.0066  Score=54.68  Aligned_cols=127  Identities=15%  Similarity=0.177  Sum_probs=91.6

Q ss_pred             CccchhhHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhHHHHHHHHH
Q 017940          180 TERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGI  259 (363)
Q Consensus       180 ~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  259 (363)
                      ..++..|..+++.+++..+...++.|+-.++...                  ...-..++.  ........|    +.|+
T Consensus        16 ~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~------------------~~~ra~~gg--~~yl~~~~W----w~G~   71 (335)
T KOG2922|consen   16 SSDNIIGLVLAISSSIFIGSSFILKKKGLKRAGA------------------SGLRAGEGG--YGYLKEPLW----WAGM   71 (335)
T ss_pred             ccCceeeeeehhhccEEEeeehhhhHHHHHHHhh------------------hcccccCCC--cchhhhHHH----HHHH
Confidence            4455689999999999999999999987766210                  000001111  111111122    3444


Q ss_pred             HHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheecccccc
Q 017940          260 VGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKNKEM  330 (363)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~~  330 (363)
                      +...++-.+-+.|-...+++.++++..++.+...+++..+++|+++....+|+.+.++|..+......+++
T Consensus        72 ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~  142 (335)
T KOG2922|consen   72 LTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQ  142 (335)
T ss_pred             HHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCccc
Confidence            45556666666667778999999999999999999999999999999999999999999988876655543

>TIGR00803 nst UDP-galactose transporter

Probab=95.40  E-value=0.037  Score=48.38  Aligned_cols=60  Identities=7%  Similarity=0.025  Sum_probs=53.6

Q ss_pred             HHHHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHH
Q 017940           83 TSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAML  148 (363)
Q Consensus        83 ~~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l  148 (363)
                      ......+....+++.+....+....+.++++.+++.++++|+++..+      ++|+.+.+.|+.+
T Consensus       162 ~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~------~~g~~lV~~~~~l  221 (222)
T TIGR00803       162 NVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTF------YLGAILVFLATFL  221 (222)
T ss_pred             HHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHH------HHHHHHHHeeeEe
Confidence            35666778889999999999999999999999999999999999999      9999998888653

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=94.16  E-value=1.9  Score=39.23  Aligned_cols=133  Identities=14%  Similarity=0.099  Sum_probs=88.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHH--HHHHHHHHHHHHHHHHhcCCCcccccccchhHH--HHHHHHHHH
Q 017940          186 GTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTA--ILSLFGAIQAAILCLATNRNHSAWSFKGKIEII--SVLYAGIVG  261 (363)
Q Consensus       186 G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~  261 (363)
                      ...-++.-+++-.+-.+..|.....++-|.....  .+.+.+.+.....-...--+++..+......|.  .+++.+-  
T Consensus        13 ~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~--   90 (314)
T KOG1444|consen   13 PLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVGM--   90 (314)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHHH--
Confidence            3445555555555566677887777665555444  777776666555444322233333333333343  2233222  


Q ss_pred             HHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhhee
Q 017940          262 SGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLW  324 (363)
Q Consensus       262 ~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~  324 (363)
                          ...-..++++.+.....++...+|+++.+.+..++|.+++...+....++.+|......
T Consensus        91 ----i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~  149 (314)
T KOG1444|consen   91 ----LFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAF  149 (314)
T ss_pred             ----HHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhcc
Confidence                12223689999999999999999999999999999999999999999999999877653

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=93.97  E-value=0.047  Score=45.70  Aligned_cols=63  Identities=17%  Similarity=0.167  Sum_probs=58.0

Q ss_pred             HHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheeccc
Q 017940          265 CYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKN  327 (363)
Q Consensus       265 ~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~  327 (363)
                      +...|..++++++|+.++.+...+-.+..+++++++|+++...+++..++.+.|++...+..+
T Consensus        66 aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN  128 (290)
T KOG4314|consen   66 ANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADN  128 (290)
T ss_pred             CCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccc
Confidence            556788999999999999999999999999999999999999999999999999998886554

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=93.35  E-value=0.21  Score=43.12  Aligned_cols=137  Identities=11%  Similarity=0.031  Sum_probs=95.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhc-CCChHHHHHHHHHHHHHHHHHHHHhhccCCCC-----cCCHHHHHHHHHHHH
Q 017940            7 WKPLIAMIAVEFGFATVNIFLKKVLEE-GMNELVFITCRLLVATILLAPIGYFWERNSRP-----KLTLRILFCLFFSAI   80 (363)
Q Consensus         7 ~~~~~~~l~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~   80 (363)
                      ..|-++++++..+-|+....--..-.. .-+...+++.-.+-+.+.+..-.++... .+.     .-.+..|.-+.+.++
T Consensus       171 g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGE-lweF~yF~~RhP~~~~~l~l~ai  249 (337)
T KOG1580|consen  171 GFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGE-LWEFFYFVQRHPYVFWDLTLLAI  249 (337)
T ss_pred             chHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhh-HHHHHHHHHhccHHHHHHHHHHH
Confidence            467788888877777776654433221 1223444555555555544433332211 000     001244666777888


Q ss_pred             HHHHHHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhh
Q 017940           81 VGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTL  151 (363)
Q Consensus        81 ~~~~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~  151 (363)
                      .+ ++++.|.+.-..+-++-.-+++..+--+|+.++++++++.+++.+|      |+|..+.+.|...=..
T Consensus       250 ~s-~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQ------wlgtvlVF~aL~~D~~  313 (337)
T KOG1580|consen  250 AS-CLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQ------WLGTVLVFSALTADVV  313 (337)
T ss_pred             HH-HhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHH------HHHHHHHHHHhhhHhh
Confidence            85 8999999999999999999999999999999999999999999999      9999999999887543

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=93.06  E-value=0.79  Score=42.19  Aligned_cols=144  Identities=12%  Similarity=0.059  Sum_probs=90.2

Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHHhc--CCCc-ccccccchhHHHHHHHH
Q 017940          182 RWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATN--RNHS-AWSFKGKIEIISVLYAG  258 (363)
Q Consensus       182 ~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~g  258 (363)
                      +...|+++..+++++.+.+.+-.||..+-  + ++.......+-+.+..|.....-  ++.. .....+...+....+.|
T Consensus         4 ~ii~Gii~h~iGg~~~~sfy~P~kkvk~W--s-WEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G   80 (344)
T PF06379_consen    4 AIILGIIFHAIGGFASGSFYVPFKKVKGW--S-WESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFG   80 (344)
T ss_pred             hHHHHHHHHHHHHHHhhhhccchhhcCCc--c-HHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHH
Confidence            34589999999999999999999987543  2 55444444444445555544321  1211 11222333455555666


Q ss_pred             HHHHHHHHHHhhhhcccCCcchhh-hhhhhHHHHHHHHHHHHhCC-------CCchhhHHHHHHHHHHhhhheeccccc
Q 017940          259 IVGSGLCYVGLTWCVKKKGPVFTA-AFSPLVQIMAAMFDIPLLHE-------RLHIGSLLGSITVIIGLYILLWGKNKE  329 (363)
Q Consensus       259 ~~~~~~~~~~~~~a~~~~~a~~~s-~~~~~~pv~~~~~~~~~~~e-------~~~~~~~~G~~li~~g~~l~~~~~~~~  329 (363)
                      ++- +++-..|-.++++++.+... +..-+.-+++.++--++.|+       +-....++|.++.++|+.+..+...++
T Consensus        81 ~lW-GIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~K  158 (344)
T PF06379_consen   81 VLW-GIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMK  158 (344)
T ss_pred             HHH-hcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhh
Confidence            654 36777888899998876543 34555566666665554332       224467899999999999998765443

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=93.03  E-value=0.35  Score=41.48  Aligned_cols=136  Identities=14%  Similarity=0.176  Sum_probs=102.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhh-cCCChHHHHHHHHHHHHHHHHHHHHhhccCCC----CcCCHHHHHHHHHHHHHHH
Q 017940            9 PLIAMIAVEFGFATVNIFLKKVLE-EGMNELVFITCRLLVATILLAPIGYFWERNSR----PKLTLRILFCLFFSAIVGT   83 (363)
Q Consensus         9 ~~~~~l~~~~~~~~~~~~~k~~~~-~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~~   83 (363)
                      |++++..-++.-+..-...|...+ .+...+..+++..+.+..+++.+....+....    ..++.....+.++.|++. 
T Consensus       156 GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~s-  234 (309)
T COG5070         156 GYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCS-  234 (309)
T ss_pred             ceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHH-
Confidence            555555555655666666665443 24567888999999999999988877654332    224555667788889886 


Q ss_pred             HHHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhh
Q 017940           84 SLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTL  151 (363)
Q Consensus        84 ~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~  151 (363)
                      +.-.+|-.+.++-++.+..+.+..+.-.-..+-+.++++|+.+...      +.++.+++..-.+-..
T Consensus       235 vgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~s------i~sillGflsg~iYav  296 (309)
T COG5070         235 VGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLS------IFSILLGFLSGAIYAV  296 (309)
T ss_pred             hhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHH------HHHHHHHHHHHHHHHH
Confidence            5556678888998999999999999988899999999999999998      9999888876666554

>KOG4831 consensus Unnamed protein [Function unknown]

Probab=92.30  E-value=2.1  Score=32.13  Aligned_cols=112  Identities=17%  Similarity=0.228  Sum_probs=72.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCh------HHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHH
Q 017940           11 IAMIAVEFGFATVNIFLKKVLEEGMNE------LVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTS   84 (363)
Q Consensus        11 ~~~l~~~~~~~~~~~~~k~~~~~~~~~------~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   84 (363)
                      .-++...++||....+.|.... +++.      -...++|-.-.                .-+.|+.+. -+++.-++  
T Consensus         6 ~~lvaVgllWG~Tnplirrgs~-g~~~v~~~~~k~~~~lqe~~t----------------l~l~w~Y~i-PFllNqcg--   65 (125)
T KOG4831|consen    6 DKLVAVGLLWGATNPLIRRGSL-GWDKVKSSSRKIMIALQEMKT----------------LFLNWEYLI-PFLLNQCG--   65 (125)
T ss_pred             HHHHHHHHHHccccHHHHHHHh-hHhhccCchHHHHHHHHHHHH----------------HHHhHHHHH-HHHHHHhh--
Confidence            4567789999999999998765 3431      11222221111                002233332 23334343  


Q ss_pred             HHHHHHHHHhhccCccchhhh-cchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhh
Q 017940           85 LTQYFFLLGIQYTSATFACAF-INMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLT  150 (363)
Q Consensus        85 ~~~~~~~~al~~~~~~~~~ii-~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~  150 (363)
                        ..+||.-+++.+.+.+..+ +++.-.|+.+.+..+..|....+-      ++|..+.++|+.+..
T Consensus        66 --Saly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a------~lGt~liv~Gi~Lci  124 (125)
T KOG4831|consen   66 --SALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLA------LLGTSLIVFGIWLCI  124 (125)
T ss_pred             --HHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhcccccccee------ehhhhHHhhhhhhee
Confidence              4567788999999999877 457888888888876555555555      899999999987653

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=89.62  E-value=3.9  Score=37.05  Aligned_cols=121  Identities=9%  Similarity=0.100  Sum_probs=82.1

Q ss_pred             HhhhccCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcc-c-ccccchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhh
Q 017940          205 SYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSA-W-SFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTA  282 (363)
Q Consensus       205 k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~a~~~s  282 (363)
                      +...+..+=|+-.+..+...-..+........+...+. . ........-.+.-.| ++++.-..+-++++++++.+..+
T Consensus        36 ~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPta-lata~DIGLSN~sl~yVtlSlYT  114 (349)
T KOG1443|consen   36 KWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTA-LATALDIGLSNWSLEYVTLSLYT  114 (349)
T ss_pred             hhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhh-hhhhcccccccceeeeeeeeeee
Confidence            33334444567777776666555544443333321111 1 110111222222344 35677888999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheecc
Q 017940          283 AFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGK  326 (363)
Q Consensus       283 ~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~  326 (363)
                      +.-...+++..+++.++-=|++++.-..=..+|-+|+++..+++
T Consensus       115 M~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~Ks  158 (349)
T KOG1443|consen  115 MTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKS  158 (349)
T ss_pred             eccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecc
Confidence            99999999999999999999999999999999999998887654

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=89.32  E-value=1.2  Score=39.61  Aligned_cols=140  Identities=19%  Similarity=0.183  Sum_probs=95.5

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHhhcCCC--hHHHHHHHHHHHHHHHHHHHHhhccC----CCCcC-CHHHHHHHHHH
Q 017940            6 EWKPLIAMIAVEFGFATVNIFLKKVLEEGMN--ELVFITCRLLVATILLAPIGYFWERN----SRPKL-TLRILFCLFFS   78 (363)
Q Consensus         6 ~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~r~~~~~i~l~~~~~~~~~~----~~~~~-~~~~~~~~~~~   78 (363)
                      ...|.++.+.+.+.-+.+.+..|..... ..  -..++++....+.++++|...+.+.-    ..+.. +++-|..+.+.
T Consensus       183 s~~GvifGVlaSl~vAlnaiytkk~l~~-v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLs  261 (347)
T KOG1442|consen  183 SWIGVIFGVLASLAVALNAIYTKKVLPP-VGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLS  261 (347)
T ss_pred             chhhhHHHHHHHHHHHHHHHhhheeccc-ccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHH
Confidence            3579999999999999999999976653 33  46788889999999999988765431    11222 56667777888


Q ss_pred             HHHHHHHHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhc
Q 017940           79 AIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYK  153 (363)
Q Consensus        79 g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~  153 (363)
                      |++|+..++ ....=++.++|-.--+=..--...-.+++..+++|..+...      |-+-++.++|-.+-.+.+
T Consensus       262 glfgF~mgy-vTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lw------wtsn~~vLvgs~~YT~vk  329 (347)
T KOG1442|consen  262 GLFGFAMGY-VTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLW------WTSNIVVLVGSLAYTLVK  329 (347)
T ss_pred             HHHHHHhhh-eeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhhe------eeeeEEEEehhHHHHHHH
Confidence            888744433 11222233444322222222233445678889999999888      999999999988877644

>PRK02237 hypothetical protein; Provisional

Probab=87.80  E-value=1.5  Score=33.13  Aligned_cols=47  Identities=11%  Similarity=0.188  Sum_probs=39.6

Q ss_pred             hhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheeccc
Q 017940          281 TAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKN  327 (363)
Q Consensus       281 ~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~  327 (363)
                      .+...-+-.+.+.++++.+-|++|+.+.++|..+.++|+.+..+..|
T Consensus        62 YAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~pR  108 (109)
T PRK02237         62 YAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAPR  108 (109)
T ss_pred             HHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecCC
Confidence            34456667788889999999999999999999999999988876554

>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine

Probab=86.52  E-value=0.37  Score=43.37  Aligned_cols=131  Identities=15%  Similarity=0.156  Sum_probs=68.8

Q ss_pred             HHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHH-HHhcC-C-----Cc----ccccccchhHHHHHHHHH
Q 017940          191 TVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILC-LATNR-N-----HS----AWSFKGKIEIISVLYAGI  259 (363)
Q Consensus       191 l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~-----~~----~~~~~~~~~~~~~~~~g~  259 (363)
                      +++.+||+..-..+|...++...| +..+|-..++.++...+. +-.+. .     .+    +....+...+...+..|+
T Consensus         2 ~itmlcwGSW~nt~kL~~r~gR~~-qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aGGv   80 (336)
T PF07168_consen    2 VITMLCWGSWPNTQKLAERRGRLP-QHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAGGV   80 (336)
T ss_pred             eeehhhhcChHHHHHHHHhcCCcc-ceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHhhH
Confidence            456788888888777776543222 223444444444333333 32221 1     01    111112222333333444


Q ss_pred             HHHHHHHHHhhhhcccCCcchhhhhh-hhHHHHHHHHHHHHhCCCCc--hhhHHHHHHHHHHhhhhee
Q 017940          260 VGSGLCYVGLTWCVKKKGPVFTAAFS-PLVQIMAAMFDIPLLHERLH--IGSLLGSITVIIGLYILLW  324 (363)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~a~~~s~~~-~~~pv~~~~~~~~~~~e~~~--~~~~~G~~li~~g~~l~~~  324 (363)
                       ..-++..+..+++...+.+..-++. .+..++++.+.| +++.+.+  ..-..|..++++++++-..
T Consensus        81 -vfnlgNillq~aia~aGmSVafpvg~glalVlGv~~NY-fld~~~n~a~iLF~GV~cf~iAI~lga~  146 (336)
T PF07168_consen   81 -VFNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNY-FLDPKINRAEILFPGVACFLIAIILGAA  146 (336)
T ss_pred             -hhhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeee-eccCCCCCceEEEccHHHHHHHHHHHHH
Confidence             3456788888888888777665553 334444555555 3445443  2455688888888877653

Transport is dependent on glucose and a proton gradient [].

>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function

Probab=86.22  E-value=1.8  Score=32.67  Aligned_cols=46  Identities=15%  Similarity=0.291  Sum_probs=39.5

Q ss_pred             hhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheeccc
Q 017940          282 AAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKN  327 (363)
Q Consensus       282 s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~  327 (363)
                      +...-+-.+.+.++++.+-+++|+.+.++|..+.++|+.+..+..|
T Consensus        61 AAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~PR  106 (107)
T PF02694_consen   61 AAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAPR  106 (107)
T ss_pred             HHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecCC
Confidence            4455667788899999999999999999999999999998877654

; GO: 0016020 membrane

>PRK02237 hypothetical protein; Provisional

Probab=86.10  E-value=4.5  Score=30.60  Aligned_cols=52  Identities=12%  Similarity=0.106  Sum_probs=41.9

Q ss_pred             hhc-cCccch-hhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhh
Q 017940           94 IQY-TSATFA-CAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTL  151 (363)
Q Consensus        94 l~~-~~~~~~-~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~  151 (363)
                      ++- .+.+.+ +.......+...+..+.+-++|++..+      ++|..++++|+.++.+
T Consensus        52 l~p~~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D------~iGa~v~L~G~~iI~~  105 (109)
T PRK02237         52 LQPDAAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWD------WIGAAICLVGMAVIMY  105 (109)
T ss_pred             cCCchhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhH------HHhHHHHHHhHHHhee
Confidence            443 444555 455567888888999999999999999      9999999999998865

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=85.74  E-value=1.1  Score=39.88  Aligned_cols=63  Identities=16%  Similarity=0.058  Sum_probs=56.1

Q ss_pred             HHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheec
Q 017940          263 GLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWG  325 (363)
Q Consensus       263 ~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~  325 (363)
                      ..+-.+.+.++..++|+...++.-...+++-+++..+++.+++..||+|+..+..|++.+...
T Consensus        97 i~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~  159 (372)
T KOG3912|consen   97 IAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSL  159 (372)
T ss_pred             HhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeee
Confidence            345566778888999999999999999999999999999999999999999999999988654

>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function

Probab=84.45  E-value=3.9  Score=30.87  Aligned_cols=53  Identities=13%  Similarity=0.171  Sum_probs=43.6

Q ss_pred             HhhccCccch-hhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhh
Q 017940           93 GIQYTSATFA-CAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTL  151 (363)
Q Consensus        93 al~~~~~~~~-~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~  151 (363)
                      .++-.+.+.+ +..-....+...+-.+.+-++|++..+      ++|..++++|+.++.+
T Consensus        50 Tl~p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D------~iGa~i~L~G~~iI~~  103 (107)
T PF02694_consen   50 TLQPAAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWD------WIGAAICLVGVAIILF  103 (107)
T ss_pred             hcCcccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHH------HHhHHHHHHhHHheEe
Confidence            3455555555 455668888899999999999999999      9999999999999875

; GO: 0016020 membrane

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	363
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	99.07
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.68
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.68
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.67

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=99.07  E-value=1.5e-10  Score=91.62  Aligned_cols=70  Identities=13%  Similarity=0.171  Sum_probs=53.6

Q ss_pred             HHHHHHHHHHHHhhhhcccCCcchhhhh-hhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheecc
Q 017940          257 AGIVGSGLCYVGLTWCVKKKGPVFTAAF-SPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGK  326 (363)
Q Consensus       257 ~g~~~~~~~~~~~~~a~~~~~a~~~s~~-~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~  326 (363)
                      +++++++++|.++.+++++.+++.+..+ ..+.|+++.+++++++||++++.+++|++++++|+++.+..+
T Consensus        35 l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            5566788999999999999999999998 899999999999999999999999999999999999997644

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.68  E-value=1.5e-07  Score=71.75  Aligned_cols=100  Identities=16%  Similarity=0.275  Sum_probs=81.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHHHHH
Q 017940            9 PLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLTQY   88 (363)
Q Consensus         9 ~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   88 (363)
                      .+++++++.++-.......|.. + +..                                 +.+.  .+.+++...+++.
T Consensus         3 ~~l~l~~a~~~e~~~~~~lK~s-~-~~~---------------------------------~~~~--~~~~~~~~~~~~~   45 (110)
T 3b5d_A            3 PYIYLGGAILAEVIGTTLMKFS-E-GFT---------------------------------RLWP--SVGTIICYCASFW   45 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhc-c-Ccc---------------------------------hHHH--HHHHHHHHHHHHH
Confidence            5677777777777777777753 1 110                                 1111  2455566789999


Q ss_pred             HHHHHhhccCccchhhh-cchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhh
Q 017940           89 FFLLGIQYTSATFACAF-INMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTL  151 (363)
Q Consensus        89 ~~~~al~~~~~~~~~ii-~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~  151 (363)
                      ++..++++.|.+.+..+ .++.|+++.+++++++||+++..+      ++|+.+++.|+.++..
T Consensus        46 ~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~------~~Gi~lIi~Gv~~l~~  103 (110)
T 3b5d_A           46 LLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPA------IIGMMLICAGVLIINL  103 (110)
T ss_pred             HHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHHhc
Confidence            99999999999999888 799999999999999999999999      9999999999999875

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.68  E-value=5.7e-08  Score=74.04  Aligned_cols=70  Identities=13%  Similarity=0.171  Sum_probs=63.9

Q ss_pred             HHHHHHHHHHHHhhhhcccCCcchhhhh-hhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheecc
Q 017940          257 AGIVGSGLCYVGLTWCVKKKGPVFTAAF-SPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGK  326 (363)
Q Consensus       257 ~g~~~~~~~~~~~~~a~~~~~a~~~s~~-~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~  326 (363)
                      .++++.+.++.++.+++++.+.+.+..+ ..+.|+.+.+++++++||++++.+++|+.+++.|+++....+
T Consensus        35 ~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            4455677899999999999999999888 899999999999999999999999999999999999987644

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.67  E-value=3.1e-08  Score=78.23  Aligned_cols=70  Identities=14%  Similarity=0.314  Sum_probs=53.9

Q ss_pred             HHHHHHHHHHHHHHHHHhhccCccchhhh-cchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhh
Q 017940           77 FSAIVGTSLTQYFFLLGIQYTSATFACAF-INMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLY  152 (363)
Q Consensus        77 ~~g~~~~~~~~~~~~~al~~~~~~~~~ii-~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~  152 (363)
                      +.+++.+.+++.++..++++++++.+..+ .++.|+++.++++++++|+++..+      ++|+++++.|++++...
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~------~~Gi~LIi~GV~ll~~~  104 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPA------IIGMMLICAGVLIINLL  104 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------C------HHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHHhcC
Confidence            45666678999999999999999999998 899999999999999999999999      99999999999999764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00