Citrus Sinensis ID: 017995

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360--
Protein Sequence
MTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYLKITSSKGQ
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHccccccHHHHHHcccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHccccEEEEEcccHHHHHHHHHccccccccccEEEccccccccccccHHHHHHHHHcccccccEEEEEcccHHHHHHHHcccEEEEEccccccccccccccHHHHHHcccccccccccccccccccccccccEEEEccccccccccccccccccccccccccccccccccccEEEEEEEcccccEEEEEEEEccccccccccEEEEEEEccccccccccccEEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHccccccHHHHHHHccccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHccccEEEEEcccHHHHEEEHccHHHHHHHccEEcccccccccccccHHHHHHHHcccccHHHEEEEEccHHHHHHHHHHccEEEEEccccccHHHHHHHHHHHHHHHHccHHHccccccccHHccccccccEEEEEEcEccccccHHHHccccEEccHHHHHccccccccEEEEEEEEEcccccEEEEEEEEEccccccccEEEEEEEcccccccccccEEEEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHcHHHHHcccccc
Coil and Loop (DISEMBL)
MTDGMFSEVLKTFLVKYgkewdgrekhkivgktpLEEAAIIVEdyglpcakhefVNEVYSMFSDHLCKVKALPGANRLIKHLschgvpmalasnshratieskisyqhgwnesFSVIVgsdevrtgkpspdIFLEAAKrlnmepssslviedsvIGVVAGKAAGMevvavpslpkqthrytAADEVINSLLdlrpekwglppfqdwiegtlpsepwyiggpvvkglgrgskvlgiptanlstegysdvlsehpsgvyfgwaglstrGVYKMVMSigwnpyfdnaektiepwllhefdedfydEELHLVIVGYirpeanfpsLETLIAKIHEDRKVAERALdlplyskyrddpylkitsskgq
Flexible Loop (DISEMBL)
MTDGMFSEVLKTFLvkygkewdgrekhkivgktplEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRlnmepssslviEDSVIGVVAGKAAGMEVVAvpslpkqthrytAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAEraldlplyskyrddpylkitsskgq
Low Complexity Region (SEG)
MTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYLKITSSKGQ
Disordered region (IsUnstruct)
*****FSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD**********IFL************SLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYL********
Disordered Region (DISOPRED)
MTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPY**I******
Disordered Region (DISEMBL)
MTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYLKITSSKGQ
Disordered Region (DISPRO)
*TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYLKIT*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYLKITSSKGQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	362	2.2.26 [Sep-21-2011]
Q8CFV9	155	Riboflavin kinase OS=Mus	yes	no	0.414	0.967	0.466	1e-36
Q969G6	155	Riboflavin kinase OS=Homo	yes	no	0.403	0.941	0.465	8e-36
O74866	163	Riboflavin kinase OS=Schi	yes	no	0.389	0.865	0.478	5e-33
O76206	153	Putative riboflavin kinas	yes	no	0.414	0.980	0.460	5e-33
Q08623	228	Pseudouridine-5'-monophos	no	no	0.560	0.890	0.391	4e-30
Q9D5U5	234	Pseudouridine-5'-monophos	no	no	0.563	0.871	0.375	1e-27
Q75DY2	186	Riboflavin kinase OS=Ashb	no	no	0.359	0.698	0.377	2e-25
Q94529	231	Probable pseudouridine-5'	no	no	0.555	0.870	0.363	2e-25
A4QQ05	200	Riboflavin kinase OS=Magn	N/A	no	0.350	0.635	0.440	5e-24
A5DAH9	180	Riboflavin kinase OS=Meye	N/A	no	0.353	0.711	0.358	8e-23

>sp|Q8CFV9|RIFK_MOUSE Riboflavin kinase OS=Mus musculus GN=Rfk PE=2 SV=2

 Score =  154 bits (388), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 70/150 (46%), Positives = 106/150 (70%)

Query: 211 LPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYK 270
           + S P++  G VV+G GRGSK LGIPTAN   +   ++ ++  +G+Y+GWA + +  V+K
Sbjct: 1   MRSLPFFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADVSTGIYYGWASVGSGDVHK 60

Query: 271 MVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIH 330
           MV+SIGWNPY+ N +K++E  ++H F EDFY E L++ IVGY+RPE NF SLE+LI+ I 
Sbjct: 61  MVVSIGWNPYYKNVKKSMETHIIHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQ 120

Query: 331 EDRKVAERALDLPLYSKYRDDPYLKITSSK 360
            D + A++ LDLP + K +DD + +++  K
Sbjct: 121 GDIEEAKKQLDLPEHLKLKDDNFFQVSKGK 150

Catalyzes the phosphorylation of riboflavin (vitamin B2) to form flavin-mononucleotide (FMN).
Mus musculus (taxid: 10090)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 2EC: 6

>sp|Q969G6|RIFK_HUMAN Riboflavin kinase OS=Homo sapiens GN=RFK PE=1 SV=2

 Score =  151 bits (381), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 68/146 (46%), Positives = 105/146 (71%)

Query: 215 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMS 274
           P++  G VV+G GRGSK LGIPTAN   +   ++ ++  +G+Y+GWA + +  V+KMV+S
Sbjct: 5   PYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADISTGIYYGWASVGSGDVHKMVVS 64

Query: 275 IGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRK 334
           IGWNPY+ N +K++E  ++H F EDFY E L++ IVGY+RPE NF SLE+LI+ I  D +
Sbjct: 65  IGWNPYYKNTKKSMETHIMHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDIE 124

Query: 335 VAERALDLPLYSKYRDDPYLKITSSK 360
            A++ L+LP + K ++D + +++ SK
Sbjct: 125 EAKKRLELPEHLKIKEDNFFQVSKSK 150

Catalyzes the phosphorylation of riboflavin (vitamin B2) to form flavin-mononucleotide (FMN).

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 2

EC: 6

>sp|O74866|RIFK_SCHPO Riboflavin kinase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fmn1 PE=1 SV=1

 Score =  142 bits (357), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 68/142 (47%), Positives = 94/142 (66%), Gaps = 1/142 (0%)

Query: 215 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMS 274
           P    G VV G GRGSK LGIPTAN+S +   ++L    SGVYFG+A +  R V+ MVMS
Sbjct: 23  PIRFEGKVVHGFGRGSKELGIPTANISEDAIQELLRYRDSGVYFGYAMVQKR-VFPMVMS 81

Query: 275 IGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRK 334
           +GWNPY+ N  ++ E  L+    EDFY+E + ++++GYIRPE N+  L+ LI  IH D +
Sbjct: 82  VGWNPYYKNKLRSAEVHLIERQGEDFYEEIMRVIVLGYIRPELNYAGLDKLIEDIHTDIR 141

Query: 335 VAERALDLPLYSKYRDDPYLKI 356
           VA  ++D P YS Y+ DP+ K+
Sbjct: 142 VALNSMDRPSYSSYKKDPFFKV 163

Catalyzes the phosphorylation of riboflavin (vitamin B2) to form flavin mononucleotide (FMN) coenzyme.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 2

EC: 6

>sp|O76206|RIFK_DROME Putative riboflavin kinase OS=Drosophila melanogaster GN=anon-84Ea PE=2 SV=1

 Score =  142 bits (357), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 70/152 (46%), Positives = 99/152 (65%), Gaps = 2/152 (1%)

Query: 211 LPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYK 270
           L   P + GG +V+G GRGSK LGIPTAN   E    +    P+G Y+GWA +    V+K
Sbjct: 2   LSQLPLFAGGEIVRGFGRGSKELGIPTANFPLEVVKSLPESLPTGAYYGWANVDNGPVHK 61

Query: 271 MVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIH 330
           MV+SIGWNP+++N EK++E  +LH+F+ D Y + L + IVGY+RPE +F SLE+LIA I 
Sbjct: 62  MVLSIGWNPFYNNKEKSVETHMLHDFNCDLYGQTLKICIVGYLRPERSFDSLESLIAAIR 121

Query: 331 EDRKVAERALDLPLYSKYRDDPYL--KITSSK 360
            D + A+  LD    +K ++ P+   K+ SSK
Sbjct: 122 GDIEQAKAFLDEADKAKLKEAPFFTEKLCSSK 153

Catalyzes the phosphorylation of riboflavin (vitamin B2) to form flavin-mononucleotide (FMN).

Drosophila melanogaster (taxid: 7227)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 2

EC: 6

>sp|Q08623|HDHD1_HUMAN Pseudouridine-5'-monophosphatase OS=Homo sapiens GN=HDHD1 PE=1 SV=3

 Score =  132 bits (332), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 81/207 (39%), Positives = 116/207 (56%), Gaps = 4/207 (1%)

Query: 2   TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSM 61
           T+ ++S V +    +Y K++    K  ++GK  LE A II++   LP +K E V E  + 
Sbjct: 22  TERLYSVVFQEICNRYDKKYSWDVKSLVMGKKALEAAQIIIDVLQLPMSKEELVEESQTK 81

Query: 62  FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS-VIVGS 120
             +       +PGA +LI HL  HG+P ALA++S  A+ + K S    +   FS +++G 
Sbjct: 82  LKEVFPTAALMPGAEKLIIHLRKHGIPFALATSSGSASFDMKTSRHKEFFSLFSHIVLGD 141

Query: 121 D-EVRTGKPSPDIFLEAAKRLNMEPS--SSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQT 177
           D EV+ GKP PDIFL  AKR +  P+    LV ED+  GV A  AAGM+VV VP      
Sbjct: 142 DPEVQHGKPDPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSR 201

Query: 178 HRYTAADEVINSLLDLRPEKWGLPPFQ 204
              T A  V+NSL D +PE +GLP ++
Sbjct: 202 DLTTKATLVLNSLQDFQPELFGLPSYE 228

Dephosphorylates pseudouridine 5'-phosphate, a potential intermediate in rRNA degradation. Pseudouridine is then excreted intact in urine.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: n

EC: 6

>sp|Q9D5U5|HDHD1_MOUSE Pseudouridine-5'-monophosphatase OS=Mus musculus GN=Hdhd1 PE=2 SV=1

 Score =  124 bits (310), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/208 (37%), Positives = 111/208 (53%), Gaps = 4/208 (1%)

Query: 2   TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSM 61
           T+ ++++V +    +YGK+++   K  ++GK  LE A  IVE   LP +K E + E    
Sbjct: 27  TEDLYTDVFEEICNRYGKKYNWDVKSLVMGKKALETAQTIVEFLNLPISKEELLKESQEK 86

Query: 62  FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF-SVIVGS 120
               L     +PGA  LI HL  H +P ALA++S   T ++K S   G+   F  +++G 
Sbjct: 87  LQMVLHTAGFMPGAEELIHHLKKHRLPFALATSSETVTFQTKTSRHTGFFGLFHHIVLGD 146

Query: 121 D-EVRTGKPSPDIFLEAAKRLN--MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQT 177
           D EV+ GKP  DIFL  AKR +   +P   LV EDS  GV A    GM+VV VP      
Sbjct: 147 DPEVKNGKPGMDIFLTCAKRFSPPPDPKDCLVFEDSPNGVEAAIHCGMQVVMVPHENLSA 206

Query: 178 HRYTAADEVINSLLDLRPEKWGLPPFQD 205
                A  V++SL D +PE +GLP F +
Sbjct: 207 DLTRKATLVLSSLHDFKPELFGLPAFTE 234

Dephosphorylates pseudouridine 5'-phosphate, a potential intermediate in rRNA degradation. Pseudouridine is then excreted intact in urine.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: n

EC: 6

>sp|Q75DY2|RIFK_ASHGO Riboflavin kinase OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=FMN1 PE=3 SV=2

 Score =  117 bits (293), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 60/159 (37%), Positives = 88/159 (55%), Gaps = 29/159 (18%)

Query: 222 VVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGL------------------ 263
           +V G GRGS  LGIPTAN+  E     ++E  +GVYFGWA L                  
Sbjct: 27  IVAGFGRGSAELGIPTANVPIEQLPSEVNEMATGVYFGWARLRPNMDQEAQVHHRNDGSE 86

Query: 264 -----------STRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGY 312
                      + RGV+ +V+S+GWNP+++N++KT+E  +L++F+EDFY  ++    +GY
Sbjct: 87  VIYNFGSKLSETERGVFPIVLSVGWNPFYNNSKKTVELHILNDFEEDFYGAKIKFSFLGY 146

Query: 313 IRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDD 351
           IRPE N+ + E LI  IH D K+A   L    YS  ++ 
Sbjct: 147 IRPELNYTTKEALIEDIHTDIKIASEVLHTEPYSSLKNQ 185

Catalyzes the phosphorylation of riboflavin (vitamin B2) to form flavin mononucleotide (FMN) coenzyme.

Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) (taxid: 284811)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 2

EC: 6

>sp|Q94529|GS1_DROME Probable pseudouridine-5'-monophosphatase OS=Drosophila melanogaster GN=Gs1l PE=2 SV=2

 Score =  117 bits (292), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/212 (36%), Positives = 115/212 (54%), Gaps = 11/212 (5%)

Query: 2   TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSM 61
           T+ +++   +  L  YGK +    K +++G      A  +VE Y LP +  E+  +  + 
Sbjct: 23  TERLYTVATEMILEPYGKTYPFEIKEQVMGLQTEPLARFMVEHYELPMSWEEYARQQRAN 82

Query: 62  FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSV----I 117
               +   + +PGA RL++HL  + VP  LA++S    +E K + QH   E FS+    +
Sbjct: 83  TEILMRNAQLMPGAERLLRHLHANKVPFCLATSSGADMVELKTA-QH--RELFSLFNHKV 139

Query: 118 VGSD--EVRTGKPSPDIFLEAAKRLNM--EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL 173
            GS   EV  GKP+PDIFL AA R  +  +PS  LV EDS  GV A  +AGM+VV VP  
Sbjct: 140 CGSSDKEVVNGKPAPDIFLVAAGRFGVPPKPSDCLVFEDSPNGVTAANSAGMQVVMVPDP 199

Query: 174 PKQTHRYTAADEVINSLLDLRPEKWGLPPFQD 205
                + + A +V+ SL D +PE++GLP F D
Sbjct: 200 RLSQEKTSHATQVLASLADFKPEQFGLPAFTD 231

Dephosphorylates pseudouridine 5'-phosphate, a potential intermediate in rRNA degradation.

Drosophila melanogaster (taxid: 7227)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: n

EC: 6

>sp|A4QQ05|RIFK_MAGO7 Riboflavin kinase OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=FMN1 PE=3 SV=3

 Score =  112 bits (279), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 63/143 (44%), Positives = 86/143 (60%), Gaps = 16/143 (11%)

Query: 215 PWYIGGPVVKGLGRGSKVLGIPTANLSTEG-YSDVLSEHPSGVYFGWAGLSTRG------ 267
           P+ + G V+ G GRGSK LGIPTANL  +   S  +S   SGVY+GWA L          
Sbjct: 20  PYKMEGKVISGFGRGSKELGIPTANLPVDATISPWISSISSGVYYGWASLQLPPSHPESP 79

Query: 268 ---------VYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEAN 318
                    V+ MVMSIG+NP+++N E++ E  +LH+F  DFYD  + L+I+G+IR E N
Sbjct: 80  SSSSCSPYVVFPMVMSIGYNPFYNNTERSAEVHILHKFTADFYDAPMRLLILGFIRDEKN 139

Query: 319 FPSLETLIAKIHEDRKVAERALD 341
           + SLE L+  I+ D  VA  +LD
Sbjct: 140 YDSLEALVKDINTDCDVARTSLD 162

Catalyzes the phosphorylation of riboflavin (vitamin B2) to form flavin mononucleotide (FMN) coenzyme.

Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) (taxid: 242507)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 2

EC: 6

>sp|A5DAH9|RIFK_PICGU Riboflavin kinase OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) GN=FMN1 PE=3 SV=2

 Score =  108 bits (269), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 57/159 (35%), Positives = 84/159 (52%), Gaps = 31/159 (19%)

Query: 219 GGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRG----------- 267
            G +  G GRGS  LGIPTAN+     +  L++  +G+Y+GW  L  R            
Sbjct: 22  AGTIESGFGRGSAELGIPTANIPV---TSELNKLETGIYYGWCRLVPRNQECAAKQRSDG 78

Query: 268 -----------------VYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIV 310
                             + M MSIGWNP+++N  KT E  ++H+F E+FY  +L   ++
Sbjct: 79  KKVYFNNGTKLADDELETFPMAMSIGWNPFYNNETKTAEVHIIHKFRENFYGADLRYAVM 138

Query: 311 GYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYR 349
           G+IRPE N+ + E LIA I++D ++ + AL  P Y KYR
Sbjct: 139 GHIRPELNYTTKEALIADINKDIEITKDALSKPSYEKYR 177

Catalyzes the phosphorylation of riboflavin (vitamin B2) to form flavin mononucleotide (FMN) coenzyme.

Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) (taxid: 294746)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 2

EC: 6

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	362
255567401	382	riboflavin kinase/fmn adenylyltransferas	0.986	0.934	0.792	1e-167
359495472	388	PREDICTED: pseudouridine-5'-monophosphat	0.980	0.914	0.774	1e-164
224082356	382	predicted protein [Populus trichocarpa]	0.986	0.934	0.781	1e-163
359495493	388	PREDICTED: pseudouridine-5'-monophosphat	0.980	0.914	0.769	1e-163
224066785	381	predicted protein [Populus trichocarpa]	0.983	0.934	0.775	1e-163
356521303	377	PREDICTED: pseudouridine-5'-monophosphat	0.977	0.938	0.765	1e-162
297804002	380	ATFMN [Arabidopsis lyrata subsp. lyrata]	0.975	0.928	0.762	1e-160
449457696	386	PREDICTED: pseudouridine-5'-monophosphat	0.977	0.917	0.754	1e-160
147846786	891	hypothetical protein VITISV_023071 [Viti	0.980	0.398	0.724	1e-159
357475891	377	Riboflavin kinase [Medicago truncatula]	0.977	0.938	0.757	1e-158

>gi|255567401|ref|XP_002524680.1| riboflavin kinase/fmn adenylyltransferase, putative [Ricinus communis] gi|223536041|gb|EEF37699.1| riboflavin kinase/fmn adenylyltransferase, putative [Ricinus communis]

 Score =  593 bits (1528), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 283/357 (79%), Positives = 314/357 (87%)

Query: 2   TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSM 61
           TDG+ S++LK FLVKYGK+WDGRE ++IVGKTP E AA IVEDY LPC   EF+ E+  M
Sbjct: 25  TDGIVSDILKVFLVKYGKQWDGREGNRIVGKTPFEAAATIVEDYKLPCPTEEFIAEITPM 84

Query: 62  FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD 121
           FSD  CK+K LPGANRLIKH   H VPMALASNS RA IE+KIS   GW ESFS+I+G D
Sbjct: 85  FSDQWCKIKPLPGANRLIKHFIGHNVPMALASNSPRANIEAKISCHEGWKESFSIIIGGD 144

Query: 122 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYT 181
           EV+ GKPSP+IFLEAA+RLN+EPSS LVIEDS+ GV+ GKAAGMEVVAVPS+PKQ+H YT
Sbjct: 145 EVKAGKPSPEIFLEAARRLNIEPSSCLVIEDSLPGVMGGKAAGMEVVAVPSIPKQSHLYT 204

Query: 182 AADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLS 241
           AADEVINSLLDL+PEKWGLP F+DW+EGTLP EPW+IGGPVVKG GRGSKVLGIPTANLS
Sbjct: 205 AADEVINSLLDLQPEKWGLPAFEDWVEGTLPVEPWHIGGPVVKGFGRGSKVLGIPTANLS 264

Query: 242 TEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFY 301
           TEGYS VLS+HPSGVYFGWA LSTRGVYKMVMSIGWNPYF+N EKTIEPWLLHEF+EDFY
Sbjct: 265 TEGYSAVLSQHPSGVYFGWAALSTRGVYKMVMSIGWNPYFNNVEKTIEPWLLHEFEEDFY 324

Query: 302 DEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYLKITS 358
            EEL LVIVGYIRPEANFPSLE+L+AKI EDRKVAE ALDLPLYSK+RDDPYLK +S
Sbjct: 325 GEELRLVIVGYIRPEANFPSLESLVAKIQEDRKVAEIALDLPLYSKFRDDPYLKGSS 381

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359495472|ref|XP_003634998.1| PREDICTED: pseudouridine-5'-monophosphatase-like [Vitis vinifera] gi|302144187|emb|CBI23314.3| unnamed protein product [Vitis vinifera]

 Score =  583 bits (1504), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 275/355 (77%), Positives = 313/355 (88%)

Query: 2   TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSM 61
           TDG+ SEVLK FLVKY K+W+G+  HK++GKTP E AA+IVEDYGLPC   E ++E+  M
Sbjct: 25  TDGIVSEVLKVFLVKYEKQWNGKVAHKLIGKTPFEAAAVIVEDYGLPCTTEELMSEITPM 84

Query: 62  FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD 121
           FS+  C +KALPGANRLIKHL  H VPMALASNS RA+IESKIS   GW ESFSVI+G D
Sbjct: 85  FSNQWCNIKALPGANRLIKHLHGHRVPMALASNSPRASIESKISCHQGWKESFSVIIGGD 144

Query: 122 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYT 181
           EVR GKPSP+IFLEA+KRL+++PS+ LVIEDS+ GV+AGKAAGMEVVAVPS+PKQ+H + 
Sbjct: 145 EVRMGKPSPEIFLEASKRLSVKPSNCLVIEDSLPGVMAGKAAGMEVVAVPSIPKQSHIFN 204

Query: 182 AADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLS 241
           +ADEVINSLLDLRPE+WGLP FQDW+E TLP EPWYIGGPV+KG GRGSKVLG+PTANLS
Sbjct: 205 SADEVINSLLDLRPEQWGLPSFQDWVEDTLPVEPWYIGGPVIKGFGRGSKVLGVPTANLS 264

Query: 242 TEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFY 301
           TEGYS +LSE  SGVYFGWAGLS +GVYKMVMSIGWNPYF+N EKTIEPWLLHEFDEDFY
Sbjct: 265 TEGYSTLLSEQSSGVYFGWAGLSKQGVYKMVMSIGWNPYFNNTEKTIEPWLLHEFDEDFY 324

Query: 302 DEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYLKI 356
            EELHLVIVGYIRPEANF SLE+LIAKIHEDR++AERALDLPLYS ++DDPYLKI
Sbjct: 325 GEELHLVIVGYIRPEANFSSLESLIAKIHEDRRIAERALDLPLYSNFKDDPYLKI 379

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224082356|ref|XP_002306660.1| predicted protein [Populus trichocarpa] gi|222856109|gb|EEE93656.1| predicted protein [Populus trichocarpa]

 Score =  582 bits (1499), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 279/357 (78%), Positives = 309/357 (86%)

Query: 2   TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSM 61
           TDG+  +VLK  L+KYGK+WDGRE  KIVGKTPLEEAAI+V DY LPC+  EFV ++  +
Sbjct: 25  TDGILGDVLKALLLKYGKQWDGREAQKIVGKTPLEEAAIVVGDYELPCSIDEFVTQITPL 84

Query: 62  FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD 121
             D  C +KALPGANRLIKHLS H VP+ALASNS RA IESKISYQ GW ESFSVI+  D
Sbjct: 85  LYDQFCNIKALPGANRLIKHLSGHNVPLALASNSPRAYIESKISYQQGWKESFSVIIAGD 144

Query: 122 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYT 181
           EVR GKPSP+IFLEAAKRLN+EPS  LVIEDS+ GV  GKAA MEVVAVPS+PKQTH Y 
Sbjct: 145 EVRAGKPSPEIFLEAAKRLNIEPSRCLVIEDSLPGVTGGKAADMEVVAVPSIPKQTHLYI 204

Query: 182 AADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLS 241
           AADEVI+SLLDL+PE WGLPPF DWI+GTLP E W+IGGPVVKG GRGSKVLGIPTANLS
Sbjct: 205 AADEVISSLLDLQPELWGLPPFDDWIDGTLPLEIWHIGGPVVKGFGRGSKVLGIPTANLS 264

Query: 242 TEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFY 301
           T+GYS +LSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYF+N EKTIEPWLLHEFD DFY
Sbjct: 265 TKGYSALLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFNNTEKTIEPWLLHEFDGDFY 324

Query: 302 DEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYLKITS 358
            EEL LVIVGYIRPEANF +LE+LIAKIHEDR++AERALD+PLY KY+DDPYLK +S
Sbjct: 325 GEELRLVIVGYIRPEANFTTLESLIAKIHEDRRIAERALDIPLYLKYKDDPYLKGSS 381

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359495493|ref|XP_002271233.2| PREDICTED: pseudouridine-5'-monophosphatase [Vitis vinifera] gi|302144186|emb|CBI23313.3| unnamed protein product [Vitis vinifera]

 Score =  580 bits (1496), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 273/355 (76%), Positives = 311/355 (87%)

Query: 2   TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSM 61
           TDG+ SEVLK FLVKY K+W+G+  HK++GKTP E AA+IVEDYGLPC   E ++E+  M
Sbjct: 25  TDGIVSEVLKVFLVKYEKQWNGKVAHKLIGKTPFEAAAVIVEDYGLPCTTEELMSEITPM 84

Query: 62  FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD 121
           FS+  C +KALPGANRLIKHL  HGVP+ALASNS RA+IESKIS   GW ESFSVI+G D
Sbjct: 85  FSNQWCNIKALPGANRLIKHLHGHGVPIALASNSPRASIESKISCHQGWKESFSVIIGGD 144

Query: 122 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYT 181
           EVR GKPSP+IF EA+KRL+++PS+ LVIEDS+ GV+AGKAAGMEVVAVPS+P Q+H + 
Sbjct: 145 EVRMGKPSPEIFFEASKRLSVKPSNCLVIEDSLPGVMAGKAAGMEVVAVPSIPNQSHIFN 204

Query: 182 AADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLS 241
           +ADEVINSLLDLRPE WGLP FQDW+E TLP EPWYIGGPV+KG GRGSKVLG+PTANLS
Sbjct: 205 SADEVINSLLDLRPELWGLPSFQDWVEDTLPVEPWYIGGPVIKGFGRGSKVLGVPTANLS 264

Query: 242 TEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFY 301
           TEGYS +LSE  SGVYFGWAGLS +GVYKMVMSIGWNPYF+N EKTIEPWLLHEFDEDFY
Sbjct: 265 TEGYSTLLSEQSSGVYFGWAGLSKQGVYKMVMSIGWNPYFNNTEKTIEPWLLHEFDEDFY 324

Query: 302 DEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYLKI 356
            EELHLVIVGYIRPEANF SLE+LIAKIHEDR++AERALDLPLYS ++DDPYLKI
Sbjct: 325 GEELHLVIVGYIRPEANFSSLESLIAKIHEDRRIAERALDLPLYSNFKDDPYLKI 379

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224066785|ref|XP_002302214.1| predicted protein [Populus trichocarpa] gi|222843940|gb|EEE81487.1| predicted protein [Populus trichocarpa]

 Score =  579 bits (1492), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 277/357 (77%), Positives = 312/357 (87%), Gaps = 1/357 (0%)

Query: 2   TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSM 61
           TDG+ S+VLK F+VKYGK+WDGRE  KIVGKTPLE AA +VEDY LPC+  +F+ ++  +
Sbjct: 25  TDGIVSDVLKVFVVKYGKQWDGRETQKIVGKTPLEAAAAVVEDYELPCSTDDFLTQITPL 84

Query: 62  FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD 121
             D  C +KALPGANRLIKHLS H VPMALASNS RA IESKISY  GW  SFSVI+  D
Sbjct: 85  LYDQWCSIKALPGANRLIKHLSSHNVPMALASNSPRANIESKISYHQGWKGSFSVIIAGD 144

Query: 122 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYT 181
           EVRTGKPSP+IFLEAAKRLN++PSS LVIEDS+ GV  GKAAGMEVVAVPS+PK +H YT
Sbjct: 145 EVRTGKPSPEIFLEAAKRLNVKPSSCLVIEDSLPGVTGGKAAGMEVVAVPSIPK-SHLYT 203

Query: 182 AADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLS 241
            ADEVINSLLDL+PE WGLPPF+DW+EGTLP EPW+IGGPVVKG GRGSKVLGIPTANLS
Sbjct: 204 EADEVINSLLDLQPELWGLPPFEDWMEGTLPIEPWHIGGPVVKGFGRGSKVLGIPTANLS 263

Query: 242 TEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFY 301
           T+GYS +LSEHPSGVYFGWAGLS++G+YKMVMSIGWNPYF+N EKTIEPWLLHEFD DFY
Sbjct: 264 TKGYSALLSEHPSGVYFGWAGLSSQGLYKMVMSIGWNPYFNNTEKTIEPWLLHEFDGDFY 323

Query: 302 DEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYLKITS 358
            EEL LV+VGYIRPEANF SLE+LIAKIHEDR++AERALD+P YSKYRDDPYLK +S
Sbjct: 324 GEELRLVVVGYIRPEANFSSLESLIAKIHEDRRIAERALDIPTYSKYRDDPYLKGSS 380

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356521303|ref|XP_003529296.1| PREDICTED: pseudouridine-5'-monophosphatase-like [Glycine max]

 Score =  577 bits (1486), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 271/354 (76%), Positives = 306/354 (86%)

Query: 2   TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSM 61
           TDG+   VLK  L KYGKEWDGRE  KI+G TP E AA +V+DY LPC+  EF++E+  +
Sbjct: 22  TDGIVGNVLKVMLGKYGKEWDGREAQKIIGTTPFEAAAAVVQDYQLPCSAIEFLSEISPL 81

Query: 62  FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD 121
           FSD  C +KALPGANRL+KHL  HGVPMALASNS R +IE+KISY  GW  SFSVI+G D
Sbjct: 82  FSDQWCNIKALPGANRLVKHLKSHGVPMALASNSPRESIEAKISYHDGWKNSFSVIIGGD 141

Query: 122 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYT 181
           EVRTGKPSP+IFLEAA+RLNMEPSS LVIEDS+ GV AGK A MEVV VPSLPKQ+H YT
Sbjct: 142 EVRTGKPSPEIFLEAARRLNMEPSSCLVIEDSLPGVTAGKTAEMEVVVVPSLPKQSHLYT 201

Query: 182 AADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLS 241
           AADEVINSLLDLR EKWGLPPF+DW+EGTLP +PWYIGGPVVKG GRGSKVLGIPTANLS
Sbjct: 202 AADEVINSLLDLRLEKWGLPPFEDWVEGTLPVDPWYIGGPVVKGFGRGSKVLGIPTANLS 261

Query: 242 TEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFY 301
           TEGYSD+LSE+P+GVYFGWAGLS RGV+KMVMSIGWNPYF+N EK IEPWLLH+F+EDFY
Sbjct: 262 TEGYSDLLSEYPAGVYFGWAGLSARGVFKMVMSIGWNPYFNNKEKAIEPWLLHDFNEDFY 321

Query: 302 DEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYLK 355
            EEL LVIVGYIRPE NF SLE+L+AKIHEDR+VAERALDLPLYS +++D YL+
Sbjct: 322 GEELRLVIVGYIRPEVNFSSLESLVAKIHEDRRVAERALDLPLYSSFKNDSYLR 375

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297804002|ref|XP_002869885.1| ATFMN [Arabidopsis lyrata subsp. lyrata] gi|297315721|gb|EFH46144.1| ATFMN [Arabidopsis lyrata subsp. lyrata]

 Score =  571 bits (1471), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 269/353 (76%), Positives = 306/353 (86%)

Query: 2   TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSM 61
           TDG+  ++L+ +L KYGK+WDGRE  KIVG+TPLE A  IVEDYGLPC   EF +E Y +
Sbjct: 25  TDGVVGDILRKYLCKYGKQWDGRESLKIVGQTPLEAATTIVEDYGLPCKVDEFNSEFYPL 84

Query: 62  FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD 121
           FS  + K+K+LPGANRLI+HL CHGVP+ALASNS RA IESKIS+  GW E FSVIVGSD
Sbjct: 85  FSAQMDKIKSLPGANRLIRHLKCHGVPVALASNSSRANIESKISHHEGWKECFSVIVGSD 144

Query: 122 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYT 181
           EV  GKPSPDIFLEAAKRLN +P+  LVIEDSV GV+AGKAAG  V+AVPSLPKQTH YT
Sbjct: 145 EVSKGKPSPDIFLEAAKRLNKDPADCLVIEDSVPGVMAGKAAGTNVIAVPSLPKQTHLYT 204

Query: 182 AADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLS 241
           +ADEVINSLLD+RPEKWGLPPFQDWIE TLP +PW+IGGPV+KG GRGSKVLGIPTANLS
Sbjct: 205 SADEVINSLLDIRPEKWGLPPFQDWIENTLPIDPWHIGGPVIKGFGRGSKVLGIPTANLS 264

Query: 242 TEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFY 301
           T+ Y+D L EHPSGVYFGWAGL+ RGV+KMVMSIGWNPYF+N EKTIEPWLLH+F EDFY
Sbjct: 265 TKDYADELVEHPSGVYFGWAGLAKRGVFKMVMSIGWNPYFNNKEKTIEPWLLHDFTEDFY 324

Query: 302 DEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYL 354
            EEL L+IVGYIRPEANF SLE+LIAKIHEDR+VAE+ALDLP Y+K++DDPYL
Sbjct: 325 GEELRLIIVGYIRPEANFSSLESLIAKIHEDREVAEKALDLPSYAKFKDDPYL 377

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449457696|ref|XP_004146584.1| PREDICTED: pseudouridine-5'-monophosphatase-like [Cucumis sativus] gi|449488415|ref|XP_004158027.1| PREDICTED: pseudouridine-5'-monophosphatase-like [Cucumis sativus]

 Score =  570 bits (1469), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 267/354 (75%), Positives = 311/354 (87%)

Query: 2   TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSM 61
           TDG+ ++VLK+FL KYGK+WDGRE  ++ GKTP E AA+IVEDYGLPC+  E ++++  +
Sbjct: 29  TDGIVNDVLKSFLGKYGKQWDGREALRVTGKTPYESAAVIVEDYGLPCSSAELMSQISPL 88

Query: 62  FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD 121
           F++  C +KALPGANRLIKH S H VP+ALASNS R  IESKIS+  GW +SFSVI+GS+
Sbjct: 89  FAERWCNIKALPGANRLIKHFSNHRVPIALASNSSRENIESKISFHPGWKDSFSVIIGSN 148

Query: 122 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYT 181
           EV   KPSP+IFLE+AKRLN+EPSS LVIEDSV GV AGKAAGM+VVAVPSLPK++H Y+
Sbjct: 149 EVTAAKPSPEIFLESAKRLNLEPSSCLVIEDSVPGVAAGKAAGMKVVAVPSLPKKSHLYS 208

Query: 182 AADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLS 241
           +ADEVINSLLD +P+KWGLPPF+DW+E TLP  P YIGGPVVKG GRGSKVLGIPTANLS
Sbjct: 209 SADEVINSLLDFQPQKWGLPPFEDWVENTLPINPLYIGGPVVKGYGRGSKVLGIPTANLS 268

Query: 242 TEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFY 301
           TEGYSDVLSEHPSGVYFGWAGLSTRG++KMVMSIGWNP+FDN EKTIEPWLLH+FD DFY
Sbjct: 269 TEGYSDVLSEHPSGVYFGWAGLSTRGIFKMVMSIGWNPFFDNVEKTIEPWLLHDFDGDFY 328

Query: 302 DEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYLK 355
            E+L LV+VGYIRPEANFPSLE+LIAKIHED ++AERALDLPLYSKYR+D YLK
Sbjct: 329 GEDLRLVVVGYIRPEANFPSLESLIAKIHEDGRIAERALDLPLYSKYRNDQYLK 382

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147846786|emb|CAN78503.1| hypothetical protein VITISV_023071 [Vitis vinifera]

 Score =  567 bits (1461), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 274/378 (72%), Positives = 312/378 (82%), Gaps = 23/378 (6%)

Query: 2   TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSM 61
           TDG+ SEVLK FLVKY K+W+G+  HK++GKTP E AA+IVEDYGLPC   E ++E+  M
Sbjct: 505 TDGIVSEVLKVFLVKYEKQWNGKVAHKLIGKTPFEAAAVIVEDYGLPCTTEELMSEITPM 564

Query: 62  FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD 121
           FS+  C +KALPGANRLIKHL  HGVP+ALASNS RA+IESKIS   GW ESFSVI+G D
Sbjct: 565 FSNQWCNIKALPGANRLIKHLHGHGVPIALASNSPRASIESKISCHQGWKESFSVIIGGD 624

Query: 122 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYT 181
           EVR GKPSP+IFLEA+KRL+++PS+ LVIEDS+ GV+AGKAAGMEVVAVPS+PKQ+H + 
Sbjct: 625 EVRMGKPSPEIFLEASKRLSVKPSNCLVIEDSLPGVMAGKAAGMEVVAVPSIPKQSHIFN 684

Query: 182 AADEVINSLLDLRPEKWGLPPFQDW---------------IEGTLPSEPWYIGGPVVKGL 226
           +ADEVINSLLDLRPE WGLP FQD                +E TLP EPWYIGGPV+KG 
Sbjct: 685 SADEVINSLLDLRPEXWGLPSFQDCKPLRYFLSYSQTFPRVEDTLPVEPWYIGGPVIKGF 744

Query: 227 GRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEK 286
           GRGSKVLG+PTANLSTEGYS +LSE  SGVYFGWAGLS +GVYKMVMSIGWNPYF+N EK
Sbjct: 745 GRGSKVLGVPTANLSTEGYSTLLSEQSSGVYFGWAGLSKQGVYKMVMSIGWNPYFNNTEK 804

Query: 287 TI--------EPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAER 338
           TI        EPWLLHEFDEDFY EELHLVIVGYIRPEANF SLE+LIAKIHEDR++AER
Sbjct: 805 TIVSATWTVKEPWLLHEFDEDFYGEELHLVIVGYIRPEANFSSLESLIAKIHEDRRIAER 864

Query: 339 ALDLPLYSKYRDDPYLKI 356
           ALDLPLYS ++DDPYLKI
Sbjct: 865 ALDLPLYSNFKDDPYLKI 882

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357475891|ref|XP_003608231.1| Riboflavin kinase [Medicago truncatula] gi|217072412|gb|ACJ84566.1| unknown [Medicago truncatula] gi|355509286|gb|AES90428.1| Riboflavin kinase [Medicago truncatula] gi|388509552|gb|AFK42842.1| unknown [Medicago truncatula]

 Score =  564 bits (1453), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 268/354 (75%), Positives = 306/354 (86%)

Query: 2   TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSM 61
           TDG+   VLK  L KYGKEWDGRE  KIVGKTPLE A+ +VEDYGLPC+  EFV+E+   
Sbjct: 22  TDGIVCNVLKVSLGKYGKEWDGRETLKIVGKTPLEAASAVVEDYGLPCSPIEFVSELSPQ 81

Query: 62  FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD 121
           FSD  C +KALPGANRLIKHL  +GVPMALASNS R +I++KIS+  GW +SFSVI+G D
Sbjct: 82  FSDQWCNIKALPGANRLIKHLKSNGVPMALASNSPRESIDAKISFHDGWKDSFSVIIGGD 141

Query: 122 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYT 181
           EVRTGKPSPDIF EAA+RL +EPSS LVIEDS+ GV AGKAA MEVVAVPSLPKQ+H +T
Sbjct: 142 EVRTGKPSPDIFFEAARRLKIEPSSCLVIEDSLPGVTAGKAAEMEVVAVPSLPKQSHLFT 201

Query: 182 AADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLS 241
           AADEVINSLLDL+ EKWGLPPF DW+E TLP +PWYIGGPV+KG GRGSKVLGIPTANLS
Sbjct: 202 AADEVINSLLDLQLEKWGLPPFADWVERTLPVDPWYIGGPVIKGFGRGSKVLGIPTANLS 261

Query: 242 TEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFY 301
           T+ YSD+L+EHP+GVYFGWAGLS RG++KMVMSIGWNPYF+N EKTIEPWLLHEF EDFY
Sbjct: 262 TKDYSDLLAEHPAGVYFGWAGLSGRGIFKMVMSIGWNPYFNNKEKTIEPWLLHEFTEDFY 321

Query: 302 DEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYLK 355
            EEL LVIVGYIRPE NFP+LE+LIAKIHEDR+VAE AL+LP+YS ++DD YL+
Sbjct: 322 GEELKLVIVGYIRPEVNFPTLESLIAKIHEDRRVAESALELPMYSSHKDDSYLR 375

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	362
TAIR|locus:2119647	379	FMN/FHY "riboflavin kinase/FMN	0.975	0.931	0.753	2.4e-147
UNIPROTKB|F1SJ99	162	RFK "Uncharacterized protein"	0.419	0.938	0.460	5.7e-36
RGD|1549748	155	Rfk "riboflavin kinase" [Rattu	0.408	0.954	0.479	7.2e-36
RGD|1563242	155	RGD1563242 "similar to ribofla	0.408	0.954	0.479	7.2e-36
UNIPROTKB|Q3SZP4	234	RFK "Uncharacterized protein"	0.458	0.709	0.433	1.2e-35
UNIPROTKB|J9NSA8	384	RFK "Uncharacterized protein"	0.419	0.395	0.453	1.2e-35
MGI|MGI:1914688	155	Rfk "riboflavin kinase" [Mus m	0.408	0.954	0.472	1.5e-35
UNIPROTKB|F1NU60	168	LOC427259 "Uncharacterized pro	0.425	0.916	0.467	1.9e-35
UNIPROTKB|J9P4I1	206	RFK "Uncharacterized protein"	0.403	0.708	0.465	1.9e-35
UNIPROTKB|Q969G6	155	RFK "Riboflavin kinase" [Homo	0.403	0.941	0.465	4e-35

TAIR|locus:2119647 FMN/FHY "riboflavin kinase/FMN hydrolase" [Arabidopsis thaliana (taxid:3702)]

 Score = 1439 (511.6 bits), Expect = 2.4e-147, P = 2.4e-147
 Identities = 266/353 (75%), Positives = 303/353 (85%)

Query:     2 TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSM 61
             TDG+  ++L+ +L KYGK+WDGRE  KIVGKTP+E A  IVEDY LPC   EF +E Y +
Sbjct:    25 TDGVVGDILRKYLCKYGKQWDGRESLKIVGKTPVEAATTIVEDYELPCKVDEFNSEFYPL 84

Query:    62 FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD 121
             FS  + K+K+LPGANRLI+HL CHGVP+ALASNS RA IESKISY  GW E FSVIVGSD
Sbjct:    85 FSAQMDKIKSLPGANRLIRHLKCHGVPVALASNSSRANIESKISYHEGWKECFSVIVGSD 144

Query:   122 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYT 181
             EV  GKPSPDIFLEAAKRL  +P+  LVIEDSV GV+AGKAAG +V+AVPSLPKQTH YT
Sbjct:   145 EVSKGKPSPDIFLEAAKRLKKDPADCLVIEDSVPGVMAGKAAGTKVIAVPSLPKQTHLYT 204

Query:   182 AADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLS 241
             +ADEVINSLLD+R EKWGLPPFQDWIE TLP +PW+IGGPV+KG GRGSKVLGIPTANLS
Sbjct:   205 SADEVINSLLDIRLEKWGLPPFQDWIENTLPIDPWHIGGPVIKGFGRGSKVLGIPTANLS 264

Query:   242 TEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFY 301
             T+ Y+D L EHPSGVYFGWAGL+ RGV+KMVMSIGWNPYF+N EKTIEPWLLH+F EDFY
Sbjct:   265 TKDYADELVEHPSGVYFGWAGLAKRGVFKMVMSIGWNPYFNNKEKTIEPWLLHDFTEDFY 324

Query:   302 DEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYL 354
              EEL L+IVGYIRPEANF SLE+LIAKIHEDR+VAE+ALDLP Y+K++ DPYL
Sbjct:   325 GEELRLIIVGYIRPEANFSSLESLIAKIHEDREVAEKALDLPSYAKFKGDPYL 377

GO:0003824 "catalytic activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0008531 "riboflavin kinase activity" evidence=IEA;ISS;IDA

GO:0009231 "riboflavin biosynthetic process" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0016787 "hydrolase activity" evidence=IEA

GO:0003919 "FMN adenylyltransferase activity" evidence=IDA

GO:0016036 "cellular response to phosphate starvation" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=RCA

UNIPROTKB|F1SJ99 RFK "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 388 (141.6 bits), Expect = 5.7e-36, P = 5.7e-36
 Identities = 70/152 (46%), Positives = 108/152 (71%)

Query:   209 GTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGV 268
             G + + P++  G VV+G GRGSK LGIPTAN   +   ++ ++  +G+Y+GWA + +  V
Sbjct:     6 GVMRNLPYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADVSTGIYYGWASVGSGDV 65

Query:   269 YKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAK 328
             +KMV+SIGWNPY+ N +K++E  ++H F EDFY E L++ IVGY+RPE NF SLE+LI+ 
Sbjct:    66 HKMVVSIGWNPYYKNTKKSMETHIMHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISA 125

Query:   329 IHEDRKVAERALDLPLYSKYRDDPYLKITSSK 360
             I  D + A++ LDLP + K ++D + +++ SK
Sbjct:   126 IQGDIEEAKKQLDLPEHLKLKEDNFFQVSKSK 157

GO:0005739 "mitochondrion" evidence=IEA

GO:0009231 "riboflavin biosynthetic process" evidence=IEA

GO:0008531 "riboflavin kinase activity" evidence=IEA

RGD|1549748 Rfk "riboflavin kinase" [Rattus norvegicus (taxid:10116)]

 Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
 Identities = 71/148 (47%), Positives = 106/148 (71%)

Query:   213 SEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMV 272
             S P++  G VV+G GRGSK LGIPTAN   +   ++ ++  +G+Y+GWA + +  V+KMV
Sbjct:     3 SLPFFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADVSTGIYYGWASVGSGEVHKMV 62

Query:   273 MSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHED 332
             +SIGWNPY+ N +K++E  ++H F EDFY E L++ IVGY+RPE NF SLE+LI+ I  D
Sbjct:    63 VSIGWNPYYKNVKKSMETHIIHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGD 122

Query:   333 RKVAERALDLPLYSKYRDDPYLKITSSK 360
              + A++ LDLP + K +DD + +++ SK
Sbjct:   123 IEEAKKQLDLPEHLKLKDDNFFQVSKSK 150

GO:0005739 "mitochondrion" evidence=IEA;ISO

GO:0008531 "riboflavin kinase activity" evidence=IEA

GO:0009231 "riboflavin biosynthetic process" evidence=IEA

RGD|1563242 RGD1563242 "similar to riboflavin kinase" [Rattus norvegicus (taxid:10116)]

 Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
 Identities = 71/148 (47%), Positives = 106/148 (71%)

Query:   213 SEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMV 272
             S P++  G VV+G GRGSK LGIPTAN   +   ++ ++  +G+Y+GWA + +  V+KMV
Sbjct:     3 SLPFFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADVSTGIYYGWASVGSGEVHKMV 62

Query:   273 MSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHED 332
             +SIGWNPY+ N +K++E  ++H F EDFY E L++ IVGY+RPE NF SLE+LI+ I  D
Sbjct:    63 VSIGWNPYYKNVKKSMETHIIHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGD 122

Query:   333 RKVAERALDLPLYSKYRDDPYLKITSSK 360
              + A++ LDLP + K +DD + +++ SK
Sbjct:   123 IEEAKKQLDLPEHLKLKDDNFFQVSKSK 150

GO:0005739 "mitochondrion" evidence=IEA

GO:0008531 "riboflavin kinase activity" evidence=IEA

GO:0009231 "riboflavin biosynthetic process" evidence=IEA

UNIPROTKB|Q3SZP4 RFK "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
 Identities = 72/166 (43%), Positives = 108/166 (65%)

Query:   195 PEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPS 254
             P+    P  +   +G +   P++  G VV+G GRGSK LGIPTAN   +   ++ ++  +
Sbjct:    64 PDSRSGPQPEPEADGVMRQLPYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADIST 123

Query:   255 GVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIR 314
             G+Y+GWA +    V+KMV+SIGWNPY+ N +K++E  ++H F EDFY E L + IVGY+R
Sbjct:   124 GIYYGWASVGNGDVHKMVVSIGWNPYYKNTKKSMETHIMHTFKEDFYGEILKVAIVGYLR 183

Query:   315 PEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYLKITSSK 360
             PE NF SLE LI+ I  D + A++ LDLP + K ++D + ++  SK
Sbjct:   184 PEKNFDSLEALISAIQGDIEEAKKRLDLPEHLKLKEDKFFQVPKSK 229

GO:0005739 "mitochondrion" evidence=IEA

GO:0009231 "riboflavin biosynthetic process" evidence=IEA

GO:0008531 "riboflavin kinase activity" evidence=IEA

UNIPROTKB|J9NSA8 RFK "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
 Identities = 69/152 (45%), Positives = 107/152 (70%)

Query:   209 GTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGV 268
             G +   P++  G VV+G GRGSK LGIPTAN   +   ++ ++  +G+Y+GWA + +  V
Sbjct:   228 GVMRHLPYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADVSTGIYYGWASVGSGDV 287

Query:   269 YKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAK 328
             +KMV+SIGWNPY+ N +K++E  ++H F EDFY E L++ IVGY+RPE NF SLE+LI+ 
Sbjct:   288 HKMVVSIGWNPYYKNTKKSMETHIIHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISA 347

Query:   329 IHEDRKVAERALDLPLYSKYRDDPYLKITSSK 360
             I  D + A++ LDLP + K+++D + ++  +K
Sbjct:   348 IQGDIEEAKKRLDLPEHLKFKEDNFFQVPKNK 379

GO:0009231 "riboflavin biosynthetic process" evidence=IEA

GO:0008531 "riboflavin kinase activity" evidence=IEA

MGI|MGI:1914688 Rfk "riboflavin kinase" [Mus musculus (taxid:10090)]

 Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
 Identities = 70/148 (47%), Positives = 105/148 (70%)

Query:   213 SEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMV 272
             S P++  G VV+G GRGSK LGIPTAN   +   ++ ++  +G+Y+GWA + +  V+KMV
Sbjct:     3 SLPFFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADVSTGIYYGWASVGSGDVHKMV 62

Query:   273 MSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHED 332
             +SIGWNPY+ N +K++E  ++H F EDFY E L++ IVGY+RPE NF SLE+LI+ I  D
Sbjct:    63 VSIGWNPYYKNVKKSMETHIIHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGD 122

Query:   333 RKVAERALDLPLYSKYRDDPYLKITSSK 360
              + A++ LDLP + K +DD + +++  K
Sbjct:   123 IEEAKKQLDLPEHLKLKDDNFFQVSKGK 150

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

GO:0008531 "riboflavin kinase activity" evidence=ISA

GO:0009231 "riboflavin biosynthetic process" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=ISA

GO:0016740 "transferase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|F1NU60 LOC427259 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
 Identities = 72/154 (46%), Positives = 102/154 (66%)

Query:   198 WGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVY 257
             W LP  +      +   P++  G VVKG GRGS+ LG+PTAN S +      S+ P+G+Y
Sbjct:     3 WTLPAMRGRCAAAVRYLPYFCRGEVVKGFGRGSRELGVPTANFSEQVVESFPSDIPTGIY 62

Query:   258 FGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEA 317
             +GWA +    V+KMV+SIGWNP++ N +K++E  +++ F EDFY E L +VI GYIR E 
Sbjct:    63 YGWASVGNGDVHKMVLSIGWNPFYKNIKKSVETHIINTFKEDFYGEILSIVITGYIRSEK 122

Query:   318 NFPSLETLIAKIHEDRKVAERALDLPLYSKYRDD 351
             NF SLETL++ I ED + A+R LDLP + K +D+
Sbjct:   123 NFNSLETLVSAIREDIEEAKRQLDLPEHLKLKDN 156

GO:0008531 "riboflavin kinase activity" evidence=IEA

GO:0009231 "riboflavin biosynthetic process" evidence=IEA

UNIPROTKB|J9P4I1 RFK "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
 Identities = 68/146 (46%), Positives = 105/146 (71%)

Query:   215 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMS 274
             P++  G VV+G GRGSK LGIPTAN   +   ++ ++  +G+Y+GWA + +  V+KMV+S
Sbjct:    57 PYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADVSTGIYYGWASVGSGDVHKMVVS 116

Query:   275 IGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRK 334
             IGWNPY+ N +K++E  ++H F EDFY E L++ IVGY+RPE NF SLE+LI+ I  D +
Sbjct:   117 IGWNPYYKNTKKSMETHIIHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDIE 176

Query:   335 VAERALDLPLYSKYRDDPYLKITSSK 360
              A++ LDLP + K+++D + ++  +K
Sbjct:   177 EAKKRLDLPEHLKFKEDNFFQVPKNK 202

GO:0009231 "riboflavin biosynthetic process" evidence=IEA

GO:0008531 "riboflavin kinase activity" evidence=IEA

UNIPROTKB|Q969G6 RFK "Riboflavin kinase" [Homo sapiens (taxid:9606)]

 Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
 Identities = 68/146 (46%), Positives = 105/146 (71%)

Query:   215 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMS 274
             P++  G VV+G GRGSK LGIPTAN   +   ++ ++  +G+Y+GWA + +  V+KMV+S
Sbjct:     5 PYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADISTGIYYGWASVGSGDVHKMVVS 64

Query:   275 IGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRK 334
             IGWNPY+ N +K++E  ++H F EDFY E L++ IVGY+RPE NF SLE+LI+ I  D +
Sbjct:    65 IGWNPYYKNTKKSMETHIMHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDIE 124

Query:   335 VAERALDLPLYSKYRDDPYLKITSSK 360
              A++ L+LP + K ++D + +++ SK
Sbjct:   125 EAKKRLELPEHLKIKEDNFFQVSKSK 150

GO:0046872 "metal ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0009398 "FMN biosynthetic process" evidence=IEA

GO:0008531 "riboflavin kinase activity" evidence=NAS;TAS

GO:0009231 "riboflavin biosynthetic process" evidence=NAS

GO:0005737 "cytoplasm" evidence=NAS

GO:0005829 "cytosol" evidence=TAS

GO:0006766 "vitamin metabolic process" evidence=TAS

GO:0006767 "water-soluble vitamin metabolic process" evidence=TAS

GO:0006771 "riboflavin metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.1.3	LOW CONFIDENCE prediction!
3rd Layer	2.7.7	LOW CONFIDENCE prediction!
3rd Layer	2.7.1	LOW CONFIDENCE prediction!
4th Layer	2.7.1.26	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_Genewise1_v1.C_LG_V0054	riboflavin kinase (EC-2.7.1.26) (383 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	gw1.142.26.1	SubName- Full=Putative uncharacterized protein; (231 aa)						•			0.899
	gw1.120.130.1	riboflavin synthase (EC-2.5.1.9) (205 aa)						•			0.899

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	362
PLN02940	382	PLN02940, PLN02940, riboflavin kinase	0.0
PLN02811	220	PLN02811, PLN02811, hydrolase	1e-53
pfam01687	125	pfam01687, Flavokinase, Riboflavin kinase	2e-40
smart00904	124	smart00904, Flavokinase, Riboflavin kinase	8e-39
COG0637	221	COG0637, COG0637, Predicted phosphatase/phosphohex	1e-31
COG0196	304	COG0196, RibF, FAD synthase [Coenzyme metabolism]	2e-27
TIGR01990	185	TIGR01990, bPGM, beta-phosphoglucomutase	3e-22
TIGR02009	185	TIGR02009, PGMB-YQAB-SF, beta-phosphoglucomutase f	4e-22
PRK05627	305	PRK05627, PRK05627, bifunctional riboflavin kinase	1e-20
TIGR01509	177	TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase sup	1e-19
pfam13419	176	pfam13419, HAD_2, Haloacid dehalogenase-like hydro	1e-17
COG0546	220	COG0546, Gph, Predicted phosphatases [General func	2e-17
PRK10826	222	PRK10826, PRK10826, 2-deoxyglucose-6-phosphatase;	1e-16
PLN02779	286	PLN02779, PLN02779, haloacid dehalogenase-like hyd	2e-16
PRK11587	218	PRK11587, PRK11587, putative phosphatase; Provisio	2e-15
TIGR00083	288	TIGR00083, ribF, riboflavin kinase/FMN adenylyltra	8e-15
cd01427	139	cd01427, HAD_like, Haloacid dehalogenase-like hydr	1e-14
COG1011	229	COG1011, COG1011, Predicted hydrolase (HAD superfa	2e-14
PLN02919	1057	PLN02919, PLN02919, haloacid dehalogenase-like hyd	2e-14
PRK10725	188	PRK10725, PRK10725, fructose-1-P/6-phosphogluconat	1e-13
PRK13222	226	PRK13222, PRK13222, phosphoglycolate phosphatase;	2e-13
pfam00702	187	pfam00702, Hydrolase, haloacid dehalogenase-like h	3e-13
TIGR01449	213	TIGR01449, PGP_bact, 2-phosphoglycolate phosphatas	6e-13
PLN02575	381	PLN02575, PLN02575, haloacid dehalogenase-like hyd	6e-12
PLN02770	248	PLN02770, PLN02770, haloacid dehalogenase-like hyd	1e-11
PLN03243	260	PLN03243, PLN03243, haloacid dehalogenase-like hyd	2e-11
TIGR01454	205	TIGR01454, AHBA_synth_RP, 3-amino-5-hydroxybenoic	2e-11
pfam13242	74	pfam13242, Hydrolase_like, HAD-hyrolase-like	3e-11
TIGR02252	203	TIGR02252, DREG-2, REG-2-like, HAD superfamily (su	2e-07
PRK10563	221	PRK10563, PRK10563, 6-phosphogluconate phosphatase	2e-07
PRK13223	272	PRK13223, PRK13223, phosphoglycolate phosphatase;	5e-07
PRK13226	229	PRK13226, PRK13226, phosphoglycolate phosphatase;	6e-07
PRK13288	214	PRK13288, PRK13288, pyrophosphatase PpaX; Provisio	8e-07
TIGR01549	162	TIGR01549, HAD-SF-IA-v1, haloacid dehalogenase sup	9e-07
TIGR03351	220	TIGR03351, PhnX-like, phosphonatase-like hydrolase	1e-06
TIGR02253	221	TIGR02253, CTE7, HAD superfamily (subfamily IA) hy	2e-06
TIGR00213	176	TIGR00213, GmhB_yaeD, D,D-heptose 1,7-bisphosphate	9e-06
TIGR01656	147	TIGR01656, Histidinol-ppas, histidinol-phosphate p	5e-05
TIGR01422	253	TIGR01422, phosphonatase, phosphonoacetaldehyde hy	1e-04
COG0241	181	COG0241, HisB, Histidinol phosphatase and related	2e-04
TIGR01458	257	TIGR01458, HAD-SF-IIA-hyp3, HAD-superfamily subfam	6e-04
COG0647	269	COG0647, NagD, Predicted sugar phosphatases of the	0.001
PRK08942	181	PRK08942, PRK08942, D,D-heptose 1,7-bisphosphate p	0.001
PRK13478	267	PRK13478, PRK13478, phosphonoacetaldehyde hydrolas	0.003
TIGR01993	183	TIGR01993, Pyr-5-nucltdase, pyrimidine 5'-nucleoti	0.004

>gnl|CDD|178528 PLN02940, PLN02940, riboflavin kinase

 Score =  676 bits (1747), Expect = 0.0
 Identities = 286/354 (80%), Positives = 316/354 (89%)

Query: 2   TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSM 61
           TDG+ S+VLK FLVKYGK+WDGRE  KIVGKTPLE AA +VEDYGLPC+  EF +E+  +
Sbjct: 25  TDGIVSDVLKAFLVKYGKQWDGREAQKIVGKTPLEAAATVVEDYGLPCSTDEFNSEITPL 84

Query: 62  FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD 121
            S+  C +KALPGANRLIKHL  HGVPMALASNS RA IE+KIS   GW ESFSVIVG D
Sbjct: 85  LSEQWCNIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGD 144

Query: 122 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYT 181
           EV  GKPSPDIFLEAAKRLN+EPS+ LVIEDS+ GV+AGKAAGMEV+AVPS+PKQTH Y+
Sbjct: 145 EVEKGKPSPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYS 204

Query: 182 AADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLS 241
           +ADEVINSLLDL+PEKWGLPPF DWIEGTLP EPW+IGGPV+KG GRGSKVLGIPTANLS
Sbjct: 205 SADEVINSLLDLQPEKWGLPPFNDWIEGTLPIEPWHIGGPVIKGFGRGSKVLGIPTANLS 264

Query: 242 TEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFY 301
           TE YSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYF+N EKTIEPWLLH+F EDFY
Sbjct: 265 TENYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFNNTEKTIEPWLLHDFGEDFY 324

Query: 302 DEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYLK 355
            EEL LVIVGYIRPEANFPSLE+LIAKIHEDR++AE+ALDLPLY+KY+DDPYL 
Sbjct: 325 GEELRLVIVGYIRPEANFPSLESLIAKIHEDRRIAEKALDLPLYAKYKDDPYLT 378

Length = 382

>gnl|CDD|178407 PLN02811, PLN02811, hydrolase

 Score =  176 bits (447), Expect = 1e-53
 Identities = 92/216 (42%), Positives = 129/216 (59%), Gaps = 17/216 (7%)

Query: 2   TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLP--CAKHEFVNEVY 59
           T+  ++EV +  L +YGK +D   K K++GK  +E A I VE+ GL    +  +F+ E  
Sbjct: 8   TEKFYTEVQEKILARYGKTFDWSLKAKMMGKKAIEAARIFVEESGLSDSLSPEDFLVERE 67

Query: 60  SMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS---- 115
           +M  D       +PGA RL++HL   G+P+A+A+ SH+   + K   +HG  E FS    
Sbjct: 68  AMLQDLFPTSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQ-RHG--ELFSLMHH 124

Query: 116 VIVGSD-EVRTGKPSPDIFLEAAKRL---NMEPSSSLVIEDSVIGVVAGKAAGMEVVAVP 171
           V+ G D EV+ GKP+PDIFL AA+R     ++P   LV ED+  GV A K AGM VV VP
Sbjct: 125 VVTGDDPEVKQGKPAPDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVVMVP 184

Query: 172 --SLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQD 205
              L K   +   AD+V++SLLD +PE+WGLPPF D
Sbjct: 185 DPRLDKSYCK--GADQVLSSLLDFKPEEWGLPPFPD 218

Length = 220

>gnl|CDD|190069 pfam01687, Flavokinase, Riboflavin kinase

 Score =  138 bits (350), Expect = 2e-40
 Identities = 51/126 (40%), Positives = 70/126 (55%), Gaps = 6/126 (4%)

Query: 215 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMS 274
           P+ I G VV G GRG   LG PTANLS      +     +GVY     +  + VY  V +
Sbjct: 5   PYSISGTVVHGKGRGRT-LGFPTANLSLPKDKLL---PKNGVYAVRVKIDGK-VYPGVAN 59

Query: 275 IGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRK 334
           IG+NP F   + TIE  +L +FD D Y EE+ +  + ++RPE  F SLE L A+I +D +
Sbjct: 60  IGYNPTFGGKKPTIEVHIL-DFDGDLYGEEIRVEFLKFLRPEKKFDSLEELKAQIKKDIE 118

Query: 335 VAERAL 340
            A + L
Sbjct: 119 QARKIL 124

This family represents the C-terminal region of the bifunctional riboflavin biosynthesis protein known as RibC in Bacillus subtilis. The RibC protein from Bacillus subtilis has both flavokinase and flavin adenine dinucleotide synthetase (FAD-synthetase) activities. RibC plays an essential role in the flavin metabolism. This domain is thought to have kinase activity. Length = 125

>gnl|CDD|214901 smart00904, Flavokinase, Riboflavin kinase

 Score =  134 bits (339), Expect = 8e-39
 Identities = 43/127 (33%), Positives = 62/127 (48%), Gaps = 7/127 (5%)

Query: 215 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMS 274
           P+ I G VV G  RG   LG PTANL  +    +     +GVY     +    +Y  V +
Sbjct: 5   PYSISGRVVHGDKRGRT-LGFPTANLPLDDRLLLP---KNGVYAVRVRV-DGKIYPGVAN 59

Query: 275 IGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRK 334
           IG  P F   ++++E  +L  F  D Y EE+ +  + +IR E  F SL+ L A+I  D +
Sbjct: 60  IGTRPTFGG-DRSVEVHILD-FSGDLYGEEIEVEFLKFIRDEQKFDSLDELKAQISRDIE 117

Query: 335 VAERALD 341
            A   L 
Sbjct: 118 EAREYLA 124

Riboflavin is converted into catalytically active cofactors (FAD and FMN) by the actions of riboflavin kinase, which converts it into FMN, and FAD synthetase, which adenylates FMN to FAD. Eukaryotes usually have two separate enzymes, while most prokaryotes have a single bifunctional protein that can carry out both catalyses, although exceptions occur in both cases. While eukaryotic monofunctional riboflavin kinase is orthologous to the bifunctional prokaryotic enzyme. the monofunctional FAD synthetase differs from its prokaryotic counterpart, and is instead related to the PAPS-reductase family. The bacterial FAD synthetase that is part of the bifunctional enzyme has remote similarity to nucleotidyl transferases and, hence, it may be involved in the adenylylation reaction of FAD synthetases. This entry represents riboflavin kinase, which occurs as part of a bifunctional enzyme or a stand-alone enzyme. Length = 124

>gnl|CDD|223710 COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only]

 Score =  118 bits (298), Expect = 1e-31
 Identities = 60/191 (31%), Positives = 96/191 (50%), Gaps = 3/191 (1%)

Query: 8   EVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDY-GLPCAKHEFV-NEVYSMFSDH 65
                 L +YG E    E  ++ G        ++ +   G   A    +   +Y   +  
Sbjct: 22  RAWLEALKEYGIEISDEEIRELHGGGIARIIDLLRKLAAGEDPADLAELERLLYEAEALE 81

Query: 66  LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRT 125
           L  +K +PG   L++ L   G+P+A+AS+S R   E ++  + G  + F VIV +D+V  
Sbjct: 82  LEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAE-RVLARLGLLDYFDVIVTADDVAR 140

Query: 126 GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADE 185
           GKP+PDI+L AA+RL ++P   +V+EDS  G+ A KAAGM VV VP+   + H       
Sbjct: 141 GKPAPDIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVVGVPAGHDRPHLDPLDAH 200

Query: 186 VINSLLDLRPE 196
             +++L    E
Sbjct: 201 GADTVLLDLAE 211

Length = 221

>gnl|CDD|223274 COG0196, RibF, FAD synthase [Coenzyme metabolism]

 Score =  109 bits (275), Expect = 2e-27
 Identities = 44/128 (34%), Positives = 63/128 (49%), Gaps = 10/128 (7%)

Query: 215 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMS 274
           P+ I G VV G   G   LG PTAN+  +           GVY     L   GVY  V +
Sbjct: 185 PYSIEGKVVHGQKLGRT-LGFPTANIYLKDNVLP----AFGVYAVRVKL-DGGVYPGVAN 238

Query: 275 IGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRK 334
           +G+ P  D +E+++E  +L  F+ D Y E + +  + +IR E  F SL+ L  +I +D  
Sbjct: 239 VGYRPTVDGSERSLEVHILD-FNGDLYGERVKVRFLKFIRDEKKFDSLDELKEQIEKD-- 295

Query: 335 VAERALDL 342
             ERA  L
Sbjct: 296 -IERARKL 302

Length = 304

>gnl|CDD|213672 TIGR01990, bPGM, beta-phosphoglucomutase

 Score = 92.4 bits (230), Expect = 3e-22
 Identities = 45/116 (38%), Positives = 60/116 (51%), Gaps = 5/116 (4%)

Query: 56  NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRA-TIESKISYQHGWNESF 114
           N+ Y      L     LPG   L+  L  + + +ALAS S  A TI  K+       + F
Sbjct: 73  NDYYVELLKELTPADVLPGIKSLLADLKKNNIKIALASASKNAPTILEKL----ELIDYF 128

Query: 115 SVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 170
             IV   E++ GKP P+IFL AA+ L + PS  + IED+  G+ A KAAGM  V V
Sbjct: 129 DAIVDPAELKKGKPDPEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMFAVGV 184

This model represents the beta-phosphoglucomutase enzyme which catalyzes the interconverison of beta-D-glucose-1-phosphate and beta-D-glucose-6-phosphate. The 6-phosphate is capable of non-enzymatic anomerization (alpha <-> beta) while the 1-phosphate is not. A separate enzyme is responsible for the isomerization of the alpha anomers. Beta-D-glucose-1-phosphate results from the phosphorylysis of maltose (2.4.1.8), trehalose (2.4.1.64) or trehalose-6-phosphate (2.4.1.216). Alternatively, these reactions can be run in the synthetic direction to create the disaccharides. All sequenced genomes which contain a member of this family also appear to contain at least one putative maltose or trehalose phosphorylase. Three species, Lactococcus, Enterococcus and Neisseria appear to contain a pair of paralogous beta-PGM's. Beta-phosphoglucomutase is a member of the haloacid dehalogenase superfamily of hydrolase enzymes. These enzymes are characterized by a series of three catalytic motifs positioned within an alpha-beta (Rossman) fold. beta-PGM contains an inserted alpha helical domain in between the first and second conserved motifs and thus is a member of subfamily IA of the superfamily. The third catalytic motif comes in three variants, the third of which, containing a conserved DD or ED, is the only one found here as well as in several other related enzymes (TIGR01509). The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 185

>gnl|CDD|213673 TIGR02009, PGMB-YQAB-SF, beta-phosphoglucomutase family hydrolase

 Score = 92.0 bits (229), Expect = 4e-22
 Identities = 58/176 (32%), Positives = 87/176 (49%), Gaps = 12/176 (6%)

Query: 2   TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA---KH---EFV 55
           T  + ++  K    KYG  +D +    + G +  +    I++  G   +    H   E  
Sbjct: 15  TAPLHAQAWKHIAAKYGISFDKQYNESLKGLSREDILRAILKLRGDGLSLEEIHQLAERK 74

Query: 56  NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRA-TIESKISYQHGWNESF 114
           NE+Y      L  V  LPG   L+K L   G+ + L S+S  A  I +K+    G  + F
Sbjct: 75  NELYRE-LLRLTGVAVLPGIRNLLKRLKAKGIAVGLGSSSKNAPRILAKL----GLRDYF 129

Query: 115 SVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 170
             IV + EV+ GKP P+ FL AA+ L + P+  +V ED++ GV A +AAGM  VAV
Sbjct: 130 DAIVDASEVKNGKPHPETFLLAAELLGVPPNECIVFEDALAGVQAARAAGMFAVAV 185

This subfamily model groups together three clades: the characterized beta-phosphoglucomutases (including those from E.coli, B.subtilus and L.lactis, TIGR01990), a clade of putative bPGM's from mycobacteria and a clade including the uncharacterized E.coli and H.influenzae yqaB genes which may prove to be beta-mutases of a related 1-phosphosugar. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). Length = 185

>gnl|CDD|235536 PRK05627, PRK05627, bifunctional riboflavin kinase/FMN adenylyltransferase; Reviewed

 Score = 90.6 bits (226), Expect = 1e-20
 Identities = 41/124 (33%), Positives = 56/124 (45%), Gaps = 9/124 (7%)

Query: 218 IGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHP-SGVYFGWAGLSTRGVYKMVMSIG 276
           I G VV G   G   LG PTANL            P  GVY     +  +  Y  V +IG
Sbjct: 188 ISGRVVHGQKLGRT-LGFPTANLPLPDRV-----LPADGVYAVRVKVDGK-PYPGVANIG 240

Query: 277 WNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVA 336
             P  D   + +E  LL +F+ D Y E + +  +  +R E  F SL+ L A+I +D + A
Sbjct: 241 TRPTVDGGRQLLEVHLL-DFNGDLYGEHITVEFLKKLRDEQKFDSLDELKAQIAKDIETA 299

Query: 337 ERAL 340
              L
Sbjct: 300 RAFL 303

Length = 305

>gnl|CDD|233443 TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

 Score = 85.2 bits (211), Expect = 1e-19
 Identities = 48/150 (32%), Positives = 71/150 (47%), Gaps = 4/150 (2%)

Query: 23  GREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCK--VKALPGANRLIK 80
             E       +           YG   +  +       +F + L K  +K LPG   L++
Sbjct: 30  PDELGVSEVGSLELALRRWKAKYGRTMSAEDAQLLYKQLFYEALEKEGLKPLPGVRALLE 89

Query: 81  HLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL 140
            L   G  +AL +NS RA  +  +    G    F V++ S +V  GKP PDI+L+A K+L
Sbjct: 90  ALRARGKKLALLTNSPRADAKLVLE--LGLRALFDVVIDSSDVGLGKPDPDIYLQALKKL 147

Query: 141 NMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 170
            ++PS  L ++DS  G+ A KAAGM  V V
Sbjct: 148 GLKPSECLFVDDSPAGIDAAKAAGMHTVLV 177

This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that representing it with a single model is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 3 (this model) is found in the enzymes beta-phosphoglucomutase (TIGR01990) and deoxyglucose-6-phosphatase, while many other enzymes of subfamily IA exhibit this variant as well as variant 1 (TIGR01549). These three variant models were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 177

>gnl|CDD|222115 pfam13419, HAD_2, Haloacid dehalogenase-like hydrolase

 Score = 79.7 bits (197), Expect = 1e-17
 Identities = 37/156 (23%), Positives = 64/156 (41%), Gaps = 7/156 (4%)

Query: 16  KYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA-KHEFVNEVYSMFSDHLCKVKALPG 74
           + G +    E  +  G    E  A ++ ++ +      E + E               P 
Sbjct: 27  RLGLDISAEELREAGGLPFDEALADLLREHPIDPDEILEALLEYNLESRLEP-----FPD 81

Query: 75  ANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFL 134
              L++ L   GV + + SN  R  +E  +    G  + F  +  SD+V   KP P+ + 
Sbjct: 82  VVELLRRLKAKGVKLVILSNGSREAVERLLEK-LGLLDLFDAVFTSDDVGARKPDPEAYE 140

Query: 135 EAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 170
              +RL + P   L I+DS   + A +AAG++ V V
Sbjct: 141 RVLERLGLPPEEILFIDDSPEDLEAARAAGIKTVHV 176

Length = 176

>gnl|CDD|223620 COG0546, Gph, Predicted phosphatases [General function prediction only]

 Score = 79.8 bits (197), Expect = 2e-17
 Identities = 48/199 (24%), Positives = 80/199 (40%), Gaps = 14/199 (7%)

Query: 6   FSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH 65
                   L + G      E+ + +    L+E    +       A  E V  +   F   
Sbjct: 22  ILRAFNAALAELGLPPLDEEEIRQLIGLGLDELIERLLGEADEEAAAELVERLREEFLTA 81

Query: 66  ---LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDE 122
              L + +  PG   L+  L   G  + + +N     ++  +    G  + F VIVG D+
Sbjct: 82  YAELLESRLFPGVKELLAALKSAGYKLGIVTNKPERELD-ILLKALGLADYFDVIVGGDD 140

Query: 123 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV------PSLPKQ 176
           V   KP P+  L   ++L ++P  +L++ DS+  ++A KAAG+  V V           Q
Sbjct: 141 VPPPKPDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQ 200

Query: 177 THRYTAADEVINSLLDLRP 195
                 AD VI+SL +L  
Sbjct: 201 AG----ADVVIDSLAELLA 215

Length = 220

>gnl|CDD|236770 PRK10826, PRK10826, 2-deoxyglucose-6-phosphatase; Provisional

 Score = 77.3 bits (191), Expect = 1e-16
 Identities = 36/128 (28%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 71  ALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSP 130
            LPG    +      G+ + LAS S    +E  +       + F  +  ++++   KP P
Sbjct: 93  LLPGVREALALCKAQGLKIGLASASPLHMLE-AVLTMFDLRDYFDALASAEKLPYSKPHP 151

Query: 131 DIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH--RYTAADEVIN 188
           +++L  A +L ++P + + +EDS  G++A KAA M  + VP+ P+Q +  R+  AD  + 
Sbjct: 152 EVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPA-PEQQNDPRWALADVKLE 210

Query: 189 SLLDLRPE 196
           SL +L   
Sbjct: 211 SLTELTAA 218

Length = 222

>gnl|CDD|215416 PLN02779, PLN02779, haloacid dehalogenase-like hydrolase family protein

 Score = 78.2 bits (193), Expect = 2e-16
 Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 3/134 (2%)

Query: 69  VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN--ESFSVIVGSDEVRTG 126
           +   PG  RL+      G+ +A+ S S+   +   ++   G    +   V  G D+V   
Sbjct: 143 LPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAG-DDVPKK 201

Query: 127 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEV 186
           KP PDI+  AA+ L ++PS  +V+EDSVIG+ A KAAGM  +   S       ++ AD V
Sbjct: 202 KPDPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAV 261

Query: 187 INSLLDLRPEKWGL 200
            + L D+  E + L
Sbjct: 262 FDCLGDVPLEDFDL 275

Length = 286

>gnl|CDD|183215 PRK11587, PRK11587, putative phosphatase; Provisional

 Score = 74.3 bits (183), Expect = 2e-15
 Identities = 49/137 (35%), Positives = 70/137 (51%), Gaps = 19/137 (13%)

Query: 69  VKALPGANRLIKHLSCHGVPMA--------LASNSHRATIESKISYQHGWNESFSVIVGS 120
           + ALPGA  L+ HL+  G+P A        +AS  H+A          G      V V +
Sbjct: 82  ITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAA---------GLPAP-EVFVTA 131

Query: 121 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRY 180
           + V+ GKP PD +L  A+ L + P   +V+ED+  GV++G AAG  V+AV + P  T R 
Sbjct: 132 ERVKRGKPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAV-NAPADTPRL 190

Query: 181 TAADEVINSLLDLRPEK 197
              D V++SL  L   K
Sbjct: 191 DEVDLVLHSLEQLTVTK 207

Length = 218

>gnl|CDD|232818 TIGR00083, ribF, riboflavin kinase/FMN adenylyltransferase

 Score = 73.6 bits (181), Expect = 8e-15
 Identities = 41/127 (32%), Positives = 60/127 (47%), Gaps = 6/127 (4%)

Query: 214 EPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVM 273
            P++I G V+ G   G   LG PTAN+  +     L     G Y     L+    Y  V 
Sbjct: 167 RPYFICGTVIHGQKLGRT-LGFPTANIKLKNQVLPL---KGGYYVVVVLLNGE-PYPGVG 221

Query: 274 SIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDR 333
           +IG  P F   +  IE  LL +F  + Y +E+ + +V  IRPE  F SL+ L  +I +D 
Sbjct: 222 NIGNRPTFIGQQLVIEVHLL-DFSGELYGQEIKVTLVKKIRPEQKFSSLDELKNQIQQDI 280

Query: 334 KVAERAL 340
             A++  
Sbjct: 281 LQAKKWF 287

multifunctional enzyme: riboflavin kinase (EC 2.7.1.26) (flavokinase) / FMN adenylyltransferase (EC 2.7.7.2) (FAD pyrophosphorylase) (FAD synthetase) [Biosynthesis of cofactors, prosthetic groups, and carriers, Riboflavin, FMN, and FAD]. Length = 288

>gnl|CDD|119389 cd01427, HAD_like, Haloacid dehalogenase-like hydrolases

 Score = 70.1 bits (172), Expect = 1e-14
 Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 17/119 (14%)

Query: 68  KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEV---- 123
           +++  PG    +K L   G+ +ALA+N  R  +   +  + G ++ F  ++ S+      
Sbjct: 22  ELELYPGVKEALKELKEKGIKLALATNKSRREVLELLE-ELGLDDYFDPVITSNGAAIYY 80

Query: 124 ------------RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 170
                         GKP+PD  L A K L ++P   L++ DS+  +   KAAG   VAV
Sbjct: 81  PKEGLFLGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV 139

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. Length = 139

>gnl|CDD|223943 COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only]

 Score = 71.5 bits (175), Expect = 2e-14
 Identities = 43/183 (23%), Positives = 73/183 (39%), Gaps = 6/183 (3%)

Query: 13  FLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKAL 72
            L    K      + +  G+  L    ++     L     E    V  + +     +   
Sbjct: 44  LLKLIEKLEARFLRGEYTGEYGLTLERLLELLERLL--GDEDAELVEELLAALAKLLPDY 101

Query: 73  PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDI 132
           P A   +K L      + + +N  R   E K+  Q G  + F  +  S++V   KP P+I
Sbjct: 102 PEALEALKELG-KKYKLGILTNGARPHQERKLR-QLGLLDYFDAVFISEDVGVAKPDPEI 159

Query: 133 FLEAAKRLNMEPSSSLVIEDSVIGVVAG-KAAGMEVVAVPSLPKQT-HRYTAADEVINSL 190
           F  A ++L + P  +L + DS+   + G +A GM+ V +    K       A D  I+SL
Sbjct: 160 FEYALEKLGVPPEEALFVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEISSL 219

Query: 191 LDL 193
            +L
Sbjct: 220 AEL 222

Length = 229

>gnl|CDD|215497 PLN02919, PLN02919, haloacid dehalogenase-like hydrolase family protein

 Score = 74.1 bits (182), Expect = 2e-14
 Identities = 39/98 (39%), Positives = 57/98 (58%)

Query: 73  PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDI 132
           PGA  LI      G+ +A+AS++ R  +++ ++        F  IV +D     KP+PDI
Sbjct: 164 PGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDI 223

Query: 133 FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 170
           FL AAK L +  S  +VIED++ GV A +AAGM  +AV
Sbjct: 224 FLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAV 261

Length = 1057

>gnl|CDD|182679 PRK10725, PRK10725, fructose-1-P/6-phosphogluconate phosphatase; Provisional

 Score = 68.6 bits (168), Expect = 1e-13
 Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 3/87 (3%)

Query: 88  PMALASNSHRATIESKISYQH-GWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 146
           PMA+ + S  A  E+ +   H G    F  +V +D+V+  KP+PD FL  A+ + ++P+ 
Sbjct: 104 PMAVGTGSESAIAEALL--AHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQ 161

Query: 147 SLVIEDSVIGVVAGKAAGMEVVAVPSL 173
            +V ED+  G+ A +AAGM+ V V  L
Sbjct: 162 CVVFEDADFGIQAARAAGMDAVDVRLL 188

Length = 188

>gnl|CDD|237310 PRK13222, PRK13222, phosphoglycolate phosphatase; Provisional

 Score = 68.7 bits (169), Expect = 2e-13
 Identities = 36/132 (27%), Positives = 56/132 (42%), Gaps = 15/132 (11%)

Query: 73  PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDI 132
           PG    +  L   G P+A+ +N     +   +    G  + FSV++G D +   KP P  
Sbjct: 96  PGVKETLAALKAAGYPLAVVTNKPTPFVA-PLLEALGIADYFSVVIGGDSLPNKKPDPAP 154

Query: 133 FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYT--------AAD 184
            L A ++L ++P   L + DS   + A +AAG   V V      T+ Y           D
Sbjct: 155 LLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGV------TYGYNYGEPIALSEPD 208

Query: 185 EVINSLLDLRPE 196
            VI+   +L P 
Sbjct: 209 VVIDHFAELLPL 220

Length = 226

>gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase

 Score = 67.3 bits (164), Expect = 3e-13
 Identities = 33/150 (22%), Positives = 55/150 (36%), Gaps = 10/150 (6%)

Query: 18  GKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANR 77
            KE       +++ +    E  +                 V  + +         PGA  
Sbjct: 45  TKEGREELVRRLLLRALAGEELLEELLRAGATVVAVLDLVVLGLIALTD---PLYPGARE 101

Query: 78  LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRT---GKPSPDIFL 134
            +K L   G+ +A+ +  +R T  +           F  +V +D       GKP P IF 
Sbjct: 102 ALKELKEAGIKLAILTGDNRLTANAIARLLG----LFDALVSADLYGLVGVGKPDPKIFE 157

Query: 135 EAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 164
            A + L ++P   L++ D V  + A KAAG
Sbjct: 158 LALEELGVKPEEVLMVGDGVNDIPAAKAAG 187

This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187

>gnl|CDD|130516 TIGR01449, PGP_bact, 2-phosphoglycolate phosphatase, prokaryotic

 Score = 66.8 bits (163), Expect = 6e-13
 Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 1/101 (0%)

Query: 70  KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPS 129
              PG    +  L   G+ + L +N         +    G  + FSV++G D +   KP 
Sbjct: 85  SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELL-GLAKYFSVLIGGDSLAQRKPH 143

Query: 130 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 170
           PD  L AA+RL + P   + + DS + + A +AAG   V +
Sbjct: 144 PDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLL 184

PGP is an essential enzyme in the glycolate salvage pathway in higher organisms (photorespiration in plants). Phosphoglycolate results from the oxidase activity of RubisCO in the Calvin cycle when concentrations of carbon dioxide are low relative to oxygen. In Ralstonia (Alcaligenes) eutropha and Rhodobacter sphaeroides, the PGP gene (CbbZ) is located on an operon along with other Calvin cycle enzymes including RubisCO. The only other pertinent experimental evidence concerns the gene from E. coli. The in vitro activity of the Ralstonia and Escherichia enzymes was determined with crude cell extracts of strains containing PGP on expression plasmids and compared to controls. In E. coli, however, there does not appear to be a functional Calvin cycle (RubisCO is absent), although the E. coli PGP gene (gph) is on the same operon (dam) with ribulose-5-phosphate-3-epimerase (rpe), a gene in the pentose-phosphate pathway (along with other, unrelated genes). The E. coli enzyme is not expressed under normal laboratory conditions; the pathway to which it belongs has not been determined. In fact, the possibility exists, although unlikely, that the E. coli enzyme and others within this equivalog have as their physiological substrate another, closely related molecule. The other seed chosen for this model, from Xylella fastidiosa has no experimental evidence, but is a plant pathogen and thus may obtain phosphoglycolate from its host. This model has been restricted to encompass only proteobacteria as no related PGP has been verified outside of this clade. Sequences from Aquifex aeolicus and Treponema pallidum fall between the trusted and noise cutoffs. Just below the noise cutoff is a gene which is part of the operon for the biosynthesis of the blue pigment, indigoidine, from Erwinia (Pectobacterium) chrysanthemi, a plant pathogen. It does not seem likely, considering the proposed biosynthetic mechanism, that the dephosphorylation of phosphoglycolate or a closely related compound is required. Possibly, this gene is fortuitously located in this operon, or has an indirect relationship to the necessity for the biosynthesis of this compound. Sequences from 11 species have been annotated as PGP or putative PGP but fall below the noise cutoff. None of these have experimental validation. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702) [Energy metabolism, Sugars]. Length = 213

>gnl|CDD|215313 PLN02575, PLN02575, haloacid dehalogenase-like hydrolase

 Score = 65.7 bits (160), Expect = 6e-12
 Identities = 44/120 (36%), Positives = 63/120 (52%), Gaps = 2/120 (1%)

Query: 74  GANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIF 133
           G+   +  L  + +PMAL S   R T+E+ I    G    FSVIV +++V  GKP P++F
Sbjct: 220 GSQEFVNVLMNYKIPMALVSTRPRKTLENAIG-SIGIRGFFSVIVAAEDVYRGKPDPEMF 278

Query: 134 LEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 193
           + AA+ LN  P   +V  +S   V A   A M+ VAV S     +   AAD V+  L +L
Sbjct: 279 IYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVAS-KHPIYELGAADLVVRRLDEL 337

Length = 381

>gnl|CDD|215413 PLN02770, PLN02770, haloacid dehalogenase-like hydrolase family protein

 Score = 64.1 bits (156), Expect = 1e-11
 Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 1/103 (0%)

Query: 68  KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGK 127
           ++K L G  +L K +   G+  A  +N+ R   E  IS   G ++ F  ++   E    K
Sbjct: 106 QLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLL-GLSDFFQAVIIGSECEHAK 164

Query: 128 PSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 170
           P PD +L+A + L +    + V EDSV G+ AG AAGM VV +
Sbjct: 165 PHPDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGL 207

Length = 248

>gnl|CDD|215644 PLN03243, PLN03243, haloacid dehalogenase-like hydrolase; Provisional

 Score = 63.5 bits (154), Expect = 2e-11
 Identities = 40/124 (32%), Positives = 63/124 (50%), Gaps = 2/124 (1%)

Query: 70  KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPS 129
           +  PG+   ++ L  H +P+A+AS   R  +E  I    G    FSV++ +++V  GKP 
Sbjct: 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIE-AVGMEGFFSVVLAAEDVYRGKPD 167

Query: 130 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINS 189
           P++F+ AA+RL   P   +V  +S   V A     M+ VAV       +  +A D V+  
Sbjct: 168 PEMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAG-KHPVYELSAGDLVVRR 226

Query: 190 LLDL 193
           L DL
Sbjct: 227 LDDL 230

Length = 260

>gnl|CDD|130521 TIGR01454, AHBA_synth_RP, 3-amino-5-hydroxybenoic acid synthesis related protein

 Score = 62.2 bits (151), Expect = 2e-11
 Identities = 42/129 (32%), Positives = 65/129 (50%), Gaps = 14/129 (10%)

Query: 46  GLPCAKHE-FVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSH----RATI 100
           GLP    E FV E Y +      +V+  PG   L+  L   GV  A+A+       R+ +
Sbjct: 54  GLPLEMEEPFVRESYRLAG----EVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLL 109

Query: 101 ESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAG 160
           E+      G    F  ++GSDEV   KP+PDI  EA + L++ P  ++++ D+V  + + 
Sbjct: 110 EAL-----GLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDAVMVGDAVTDLASA 164

Query: 161 KAAGMEVVA 169
           +AAG   VA
Sbjct: 165 RAAGTATVA 173

The enzymes in this equivalog are all located in the operons for the biosynthesis of 3-amino-5-hydroxybenoic acid (AHBA), which is a precursor of several antibiotics including ansatrienin , naphthomycin , rifamycin and mitomycin. The role that this enzyme plays in this biosynthesis has not been elucidated. This enzyme is a member of the Haloacid dehalogenase superfamily (pfam00702) of aspartate-nucleophile hydrolases. This enzyme is closely related to phosphoglycolate phosphatase (TIGR01449), but it is unclear what purpose a PGPase or PGPase-like activity would serve in these biosyntheses. This model is limited to the Gram positive Actinobacteria. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. Length = 205

>gnl|CDD|222003 pfam13242, Hydrolase_like, HAD-hyrolase-like

 Score = 58.5 bits (142), Expect = 3e-11
 Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 14/77 (18%)

Query: 126 GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTA--- 182
           GKP+P +   A +RL ++P   ++I DS   ++A +AAG+  + V      T   TA   
Sbjct: 3   GKPNPGMLRAALERLGVDPEECVMIGDSDTDILAARAAGIRTILVL-----TGVTTAEDL 57

Query: 183 ------ADEVINSLLDL 193
                  D V++SL DL
Sbjct: 58  ERAPGRPDYVVDSLADL 74

Length = 74

>gnl|CDD|200170 TIGR02252, DREG-2, REG-2-like, HAD superfamily (subfamily IA) hydrolase

 Score = 50.7 bits (122), Expect = 2e-07
 Identities = 38/122 (31%), Positives = 56/122 (45%), Gaps = 10/122 (8%)

Query: 48  PCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASN---SHRATIESKI 104
           P +  +   E+YS F+      +  P A +L+K L   G+ + + SN     R  +E+  
Sbjct: 84  PESFEKIFEELYSYFATPEP-WQVYPDAIKLLKDLRERGLILGVISNFDSRLRGLLEAL- 141

Query: 105 SYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVI-GVVAGKAA 163
               G  E F  +V S EV   KP P IF EA +R  + P  +L I DS+       +AA
Sbjct: 142 ----GLLEYFDFVVTSYEVGAEKPDPKIFQEALERAGISPEEALHIGDSLRNDYQGARAA 197

Query: 164 GM 165
           G 
Sbjct: 198 GW 199

This family of proteins includes uncharacterized sequences from eukaryotes, cyanobacteria and Leptospira as well as the DREG-2 protein from Drosophila melanogaster which has been identified as a rhythmically (diurnally) regulated gene. This family is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called 'capping domain', or the absence of such a domain. This family is a member of subfamily 1A in which the cap domain consists of a predicted alpha helical bundle found in between the first and second catalytic motifs. A distinctive feature of this family is a conserved tandem pair of tryptophan residues in the cap domain. The most divergent sequences included within the scope of this model are from plants and have "FW" at this position instead. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. Length = 203

>gnl|CDD|182552 PRK10563, PRK10563, 6-phosphogluconate phosphatase; Provisional

 Score = 50.8 bits (122), Expect = 2e-07
 Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 20/138 (14%)

Query: 39  AIIVEDYGLPCAKHE----FVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASN 94
            II +++G+  AK E    +  EV  +F   L   + + GAN L++ ++   VPM + SN
Sbjct: 56  DIISKEHGVTLAKAELEPVYRAEVARLFDSEL---EPIAGANALLESIT---VPMCVVSN 109

Query: 95  SHRATIESKISYQHGWNESFS-----VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV 149
                  SK+ +  G           +  G D ++  KP P +   AA+ +N+   + ++
Sbjct: 110 GP----VSKMQHSLGKTGMLHYFPDKLFSGYD-IQRWKPDPALMFHAAEAMNVNVENCIL 164

Query: 150 IEDSVIGVVAGKAAGMEV 167
           ++DS  G  +G AAGMEV
Sbjct: 165 VDDSSAGAQSGIAAGMEV 182

Length = 221

>gnl|CDD|171912 PRK13223, PRK13223, phosphoglycolate phosphatase; Provisional

 Score = 50.2 bits (120), Expect = 5e-07
 Identities = 54/179 (30%), Positives = 71/179 (39%), Gaps = 35/179 (19%)

Query: 27  HKIVGKTPLEEA-AIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCH 85
           H  V     E+A A+ +E Y      HE    VY             PG    +K L   
Sbjct: 74  HDGVDDELAEQALALFMEAYA---DSHEL-TVVY-------------PGVRDTLKWLKKQ 116

Query: 86  GVPMALASNSHRATI-----ESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL 140
           GV MAL +N     +     + KI     W      I+G D +   KP P   L   K  
Sbjct: 117 GVEMALITNKPERFVAPLLDQMKIGRYFRW------IIGGDTLPQKKPDPAALLFVMKMA 170

Query: 141 NMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADE----VINSLLDLRP 195
            + PS SL + DS   V+A KAAG++ VA+       H    A+E    VI+ L  L P
Sbjct: 171 GVPPSQSLFVGDSRSDVLAAKAAGVQCVALSY--GYNHGRPIAEESPALVIDDLRALLP 227

Length = 272

>gnl|CDD|237311 PRK13226, PRK13226, phosphoglycolate phosphatase; Provisional

 Score = 49.5 bits (118), Expect = 6e-07
 Identities = 22/64 (34%), Positives = 36/64 (56%)

Query: 107 QHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME 166
           Q GW +  +V++G D +   KP P   L AA+R+ + P+  + + D    ++A +AAGM 
Sbjct: 131 QLGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMP 190

Query: 167 VVAV 170
            VA 
Sbjct: 191 SVAA 194

Length = 229

>gnl|CDD|237336 PRK13288, PRK13288, pyrophosphatase PpaX; Provisional

 Score = 48.9 bits (117), Expect = 8e-07
 Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 5/104 (4%)

Query: 69  VKALPGANRLIKHLSCHGVPMALASNSHRATIES--KISYQHGWNESFSVIVGSDEVRTG 126
           V         +K L   G  + + +   R T+E   K++   G +E F V++  D+V   
Sbjct: 81  VTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLT---GLDEFFDVVITLDDVEHA 137

Query: 127 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 170
           KP P+  L+A + L  +P  +L++ D+   ++AGK AG +   V
Sbjct: 138 KPDPEPVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGV 181

Length = 214

>gnl|CDD|233463 TIGR01549, HAD-SF-IA-v1, haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E

 Score = 48.1 bits (115), Expect = 9e-07
 Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 3/95 (3%)

Query: 70  KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPS 129
             +PGA  L+  L   G+ + + SN      +  +   HG  + F +I+GSDE+ + KP 
Sbjct: 71  AYIPGAADLLPRLKEAGIKLGIISNGSLRAQKLLLRK-HGLGDYFELILGSDEIGS-KPE 128

Query: 130 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 164
           P+IFL A + L + P   L + D++  +   + AG
Sbjct: 129 PEIFLAALESLGVPP-EVLHVGDNLSDIKGARNAG 162

This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single representation is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)(D/E), (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 1 (this model) is found in the enzymes phosphoglycolate phosphatase (TIGR01449) and enolase-phosphatase. These three variant models (see also TIGR01493 and TIGR01509) were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 162

>gnl|CDD|234176 TIGR03351, PhnX-like, phosphonatase-like hydrolase

 Score = 48.6 bits (116), Expect = 1e-06
 Identities = 38/160 (23%), Positives = 61/160 (38%), Gaps = 21/160 (13%)

Query: 19  KEWDGREKHKIV------GKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKAL 72
             W G+ K + +            EA     D+           E  +   D      AL
Sbjct: 41  SAWMGQSKIEAIRALLAADGADEAEAQAAFADF----------EERLAEAYDDG-PPVAL 89

Query: 73  PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGW--NESFSVIVGSDEVRTGKPSP 130
           PGA    + L   G+ +AL +   R T E ++  + GW   +    +V   +V  G+P+P
Sbjct: 90  PGAEEAFRSLRSSGIKVALTTGFDRDTAE-RLLEKLGWTVGDDVDAVVCPSDVAAGRPAP 148

Query: 131 DIFLEAAKRLNMEPSSS-LVIEDSVIGVVAGKAAGMEVVA 169
           D+ L A +   ++   S  V  D+   + AG  AG   V 
Sbjct: 149 DLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVV 188

This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the substrate is also, like Pald, a 2-oxo-ethylphosphonate. Despite this, the genomic context of members of this family are quite distinct from PhnX, which is almost invariably associated with the 2-aminoethylphosphonate transaminase PhnW (TIGR02326), the source of the substrate Pald. Members of this clade are never associated with PhnW, but rather associate with families of FAD-dependent oxidoreductases related to deaminating amino acid oxidases (pfam01266) as well as zinc-dependent dehydrogenases (pfam00107). Notably, family members from Arthrobacter aurescens TC1 and Nocardia farcinica IFM 10152 are adjacent to the PhnCDE ABC cassette phosphonates transporter (GenProp0236) typically found in association with the phosphonates C-P lyase system (GenProp0232). These observations suggest two possibilities. First, the substrate for this enzyme family is also Pald, the non-association with PhnW not withstanding. Alternatively, the substrate is something very closely related such as hydroxyphosphonoacetaldehyde (Hpald). Hpald could come from oxidative deamination of 1-hydroxy-2-aminoethylphosphonate (HAEP) by the associated oxidase. HAEP would not be a substrate for PhnW due to its high specificity for AEP. HAEP has been shown to be a constituent of the sphingophosphonolipid of Bacteriovorax stolpii, and presumably has other natural sources. If Hpald is the substrate, the product would be glycoaldehyde (hydroxyacetaldehyde), and the associated alcohol dehydrogenase may serve to convert this to glycol. Length = 220

>gnl|CDD|162787 TIGR02253, CTE7, HAD superfamily (subfamily IA) hydrolase, TIGR02253

 Score = 47.8 bits (114), Expect = 2e-06
 Identities = 32/142 (22%), Positives = 58/142 (40%), Gaps = 5/142 (3%)

Query: 56  NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS 115
             VY+        ++  PG    +  L   G  + + ++        K+  + G  + F 
Sbjct: 80  AFVYAYHKLKFAYLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLE-RLGVRDFFD 138

Query: 116 VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVI-GVVAGKAAGMEVVAVPSLP 174
            ++ S+E    KP P IF  A KRL ++P  ++++ D +   +   K  GM+ V +    
Sbjct: 139 AVITSEEEGVEKPHPKIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWINQGK 198

Query: 175 KQTHR---YTAADEVINSLLDL 193
                   Y   D  I+SL +L
Sbjct: 199 SSKMEDDVYPYPDYEISSLREL 220

This family of sequences from archaea and metazoans includes the human uncharacterized protein CTE7. Pyrococcus species appear to have three different forms of this enzyme, so it is unclear whether all members of this family have the same function. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Length = 221

>gnl|CDD|129317 TIGR00213, GmhB_yaeD, D,D-heptose 1,7-bisphosphate phosphatase

 Score = 45.3 bits (107), Expect = 9e-06
 Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 2/69 (2%)

Query: 127 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA--GMEVVAVPSLPKQTHRYTAAD 184
           KP P + L+A K L+++ + S ++ D +  + AG AA     V+     P        AD
Sbjct: 106 KPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIAD 165

Query: 185 EVINSLLDL 193
            V+NSL DL
Sbjct: 166 WVLNSLADL 174

This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PMID:11751812) [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 176

>gnl|CDD|233512 TIGR01656, Histidinol-ppas, histidinol-phosphate phosphatase family domain

 Score = 42.8 bits (101), Expect = 5e-05
 Identities = 18/46 (39%), Positives = 27/46 (58%)

Query: 127 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 172
           KP P + LEA KRL ++ S SLV+ D +  + A + AG+  V +  
Sbjct: 101 KPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAVLLVD 146

This domain is found in authentic histidinol-phosphate phosphatases which are sometimes found as stand-alone entities and sometimes as fusions with imidazoleglycerol-phosphate dehydratase (TIGR01261). Additionally, a family of proteins including YaeD from E. coli (TIGR00213) and various other proteins are closely related but may not have the same substrate specificity. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. Length = 147

>gnl|CDD|188140 TIGR01422, phosphonatase, phosphonoacetaldehyde hydrolase

 Score = 43.1 bits (102), Expect = 1e-04
 Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 5/101 (4%)

Query: 73  PGANRLIKHLSCHGVPMALASNSHRATIE--SKISYQHGWNESFSVIVGSDEVRTGKPSP 130
           PGA  +I +L   G+ +   +   R  ++  +  +   G+   +   V +D+V  G+P+P
Sbjct: 102 PGAIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAAAQGYRPDY--NVTADDVPAGRPAP 159

Query: 131 DIFLEAAKRLNMEPSSSLV-IEDSVIGVVAGKAAGMEVVAV 170
            + L+ A  L +   +++V + D+V  +  G+ AGM  V V
Sbjct: 160 WMALKNATELGVYDPAAVVKVGDTVPDIEEGRNAGMWTVGV 200

This enzyme catalyzes the cleavage of the carbon phosphorous bond of a phosphonate. The mechanism depends on the substrate having a carbonyl one carbon away from the cleavage position. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent [Central intermediary metabolism, Other]. Length = 253

>gnl|CDD|223319 COG0241, HisB, Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]

 Score = 41.1 bits (97), Expect = 2e-04
 Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 1/68 (1%)

Query: 127 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME-VVAVPSLPKQTHRYTAADE 185
           KP P + L A K  N++ S S V+ D +  + A + AG++ V+ +  +   T     A  
Sbjct: 105 KPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVLTGIGVTTDGAGRAKW 164

Query: 186 VINSLLDL 193
           V +SL + 
Sbjct: 165 VFDSLAEF 172

Length = 181

>gnl|CDD|162372 TIGR01458, HAD-SF-IIA-hyp3, HAD-superfamily subfamily IIA hydrolase, TIGR01458

 Score = 40.6 bits (95), Expect = 6e-04
 Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 6/61 (9%)

Query: 126 GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAG-KAAGMEVVAVPSLPKQTHRYTAAD 184
           GKPS   FLEA +    EP  +++I D     V G +  GM  + V     +T +Y  +D
Sbjct: 178 GKPSKTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQV-----RTGKYRPSD 232

Query: 185 E 185
           E
Sbjct: 233 E 233

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published [Unknown function, Enzymes of unknown specificity]. Length = 257

>gnl|CDD|223720 COG0647, NagD, Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

 Score = 39.9 bits (94), Expect = 0.001
 Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 1/46 (2%)

Query: 126 GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG-VVAGKAAGMEVVAV 170
           GKPSP I+  A ++L ++ S  L++ D +   ++  KAAG++ + V
Sbjct: 189 GKPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLV 234

Length = 269

>gnl|CDD|236354 PRK08942, PRK08942, D,D-heptose 1,7-bisphosphate phosphatase; Validated

 Score = 39.0 bits (92), Expect = 0.001
 Identities = 15/38 (39%), Positives = 24/38 (63%)

Query: 127 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 164
           KP P + L  A+RLN++ + S ++ DS+  + A  AAG
Sbjct: 103 KPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAG 140

Length = 181

>gnl|CDD|184075 PRK13478, PRK13478, phosphonoacetaldehyde hydrolase; Provisional

 Score = 38.7 bits (91), Expect = 0.003
 Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 1/56 (1%)

Query: 116 VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV-IEDSVIGVVAGKAAGMEVVAV 170
            +V +D+V  G+P P + L+ A  L +   ++ V ++D+V G+  G  AGM  V V
Sbjct: 147 HVVTTDDVPAGRPYPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGV 202

Length = 267

>gnl|CDD|233675 TIGR01993, Pyr-5-nucltdase, pyrimidine 5'-nucleotidase

 Score = 37.7 bits (88), Expect = 0.004
 Identities = 16/44 (36%), Positives = 26/44 (59%)

Query: 127 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 170
           KPSP  + +A +   ++P  ++  +DS   + AGKA GM+ V V
Sbjct: 140 KPSPQAYEKALREAGVDPERAIFFDDSARNIAAGKALGMKTVLV 183

This family of proteins includes the SDT1/SSM1 gene from yeast which has been shown to code for a pyrimidine (UMP/CMP) 5'nucleotidase. The family spans plants, fungi and a small number of bacteria. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). Length = 183

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	362
PLN02940	382	riboflavin kinase	100.0
TIGR00083	288	ribF riboflavin kinase/FMN adenylyltransferase. mu	100.0
PRK05627	305	bifunctional riboflavin kinase/FMN adenylyltransfe	100.0
PF01687	125	Flavokinase: Riboflavin kinase; InterPro: IPR01586	100.0
COG0196	304	RibF FAD synthase [Coenzyme metabolism]	100.0
KOG3110	153	consensus Riboflavin kinase [Coenzyme transport an	100.0
PRK07143	279	hypothetical protein; Provisional	100.0
PLN02811	220	hydrolase	99.93
COG0637	221	Predicted phosphatase/phosphohexomutase [General f	99.92
PLN03243	260	haloacid dehalogenase-like hydrolase; Provisional	99.92
TIGR01449	213	PGP_bact 2-phosphoglycolate phosphatase, prokaryot	99.92
PLN02770	248	haloacid dehalogenase-like hydrolase family protei	99.92
PLN02575	381	haloacid dehalogenase-like hydrolase	99.92
PRK10826	222	2-deoxyglucose-6-phosphatase; Provisional	99.92
TIGR03351	220	PhnX-like phosphonatase-like hydrolase. This clade	99.91
COG0546	220	Gph Predicted phosphatases [General function predi	99.91
PRK13226	229	phosphoglycolate phosphatase; Provisional	99.91
TIGR01422	253	phosphonatase phosphonoacetaldehyde hydrolase. Thi	99.9
PRK10725	188	fructose-1-P/6-phosphogluconate phosphatase; Provi	99.9
PRK13288	214	pyrophosphatase PpaX; Provisional	99.9
PRK10563	221	6-phosphogluconate phosphatase; Provisional	99.9
TIGR01990	185	bPGM beta-phosphoglucomutase. The enzyme from L. l	99.9
PRK11587	218	putative phosphatase; Provisional	99.89
KOG2914	222	consensus Predicted haloacid-halidohydrolase and r	99.89
PRK13478	267	phosphonoacetaldehyde hydrolase; Provisional	99.89
TIGR02009	185	PGMB-YQAB-SF beta-phosphoglucomutase family hydrol	99.88
TIGR01454	205	AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes	99.88
TIGR02253	221	CTE7 HAD superfamily (subfamily IA) hydrolase, TIG	99.88
PRK13223	272	phosphoglycolate phosphatase; Provisional	99.87
PRK13225	273	phosphoglycolate phosphatase; Provisional	99.86
PRK13222	226	phosphoglycolate phosphatase; Provisional	99.86
PF13419	176	HAD_2: Haloacid dehalogenase-like hydrolase; PDB:	99.85
TIGR02254	224	YjjG/YfnB HAD superfamily (subfamily IA) hydrolase	99.85
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.84
TIGR02252	203	DREG-2 REG-2-like, HAD superfamily (subfamily IA)	99.84
PLN02779	286	haloacid dehalogenase-like hydrolase family protei	99.84
PRK09449	224	dUMP phosphatase; Provisional	99.84
PRK06698	459	bifunctional 5'-methylthioadenosine/S-adenosylhomo	99.83
TIGR01428	198	HAD_type_II 2-haloalkanoic acid dehalogenase, type	99.83
TIGR01548	197	HAD-SF-IA-hyp1 haloacid dehalogenase superfamily,	99.81
PRK09456	199	?-D-glucose-1-phosphatase; Provisional	99.81
PRK14988	224	GMP/IMP nucleotidase; Provisional	99.8
TIGR01509	183	HAD-SF-IA-v3 haloacid dehalogenase superfamily, su	99.79
TIGR02247	211	HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li	99.78
PRK10748	238	flavin mononucleotide phosphatase; Provisional	99.76
TIGR01993	184	Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These	99.75
TIGR00213	176	GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase	99.74
TIGR01549	154	HAD-SF-IA-v1 haloacid dehalogenase superfamily, su	99.73
PRK06769	173	hypothetical protein; Validated	99.72
COG1011	229	Predicted hydrolase (HAD superfamily) [General fun	99.7
TIGR01493	175	HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su	99.7
PRK08942	181	D,D-heptose 1,7-bisphosphate phosphatase; Validate	99.69
TIGR01261	161	hisB_Nterm histidinol-phosphatase. This model desc	99.69
TIGR01691	220	enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen	99.69
TIGR01656	147	Histidinol-ppas histidinol-phosphate phosphatase f	99.68
PHA02597	197	30.2 hypothetical protein; Provisional	99.68
TIGR01685	174	MDP-1 magnesium-dependent phosphatase-1. This mode	99.67
KOG3085	237	consensus Predicted hydrolase (HAD superfamily) [G	99.64
TIGR01662	132	HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I	99.61
TIGR01664	166	DNA-3'-Pase DNA 3'-phosphatase. The central phosph	99.55
TIGR01668	170	YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph	99.53
PRK05446	354	imidazole glycerol-phosphate dehydratase/histidino	99.51
smart00577	148	CPDc catalytic domain of ctd-like phosphatases.	99.5
PHA02530	300	pseT polynucleotide kinase; Provisional	99.48
TIGR00338	219	serB phosphoserine phosphatase SerB. Phosphoserine	99.46
TIGR01491	201	HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa	99.45
TIGR01672	237	AphA HAD superfamily (subfamily IIIB) phosphatase,	99.42
PLN02954	224	phosphoserine phosphatase	99.41
TIGR01681	128	HAD-SF-IIIC HAD-superfamily phosphatase, subfamily	99.37
cd01427	139	HAD_like Haloacid dehalogenase-like hydrolases. Th	99.37
PRK09552	219	mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp	99.33
PRK11133	322	serB phosphoserine phosphatase; Provisional	99.32
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	99.31
PRK11009	237	aphA acid phosphatase/phosphotransferase; Provisio	99.31
COG2179	175	Predicted hydrolase of the HAD superfamily [Genera	99.3
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	99.27
TIGR01489	188	DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent	99.24
PF13242	75	Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY	99.23
TIGR03333	214	salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl	99.22
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	99.22
TIGR02726	169	phenyl_P_delta phenylphosphate carboxylase, delta	99.18
KOG3109	244	consensus Haloacid dehalogenase-like hydrolase [Ge	99.18
TIGR01490	202	HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol	99.15
PRK13582	205	thrH phosphoserine phosphatase; Provisional	99.13
PF00702	215	Hydrolase: haloacid dehalogenase-like hydrolase; I	99.12
TIGR01670	154	YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho	99.12
TIGR01686	320	FkbH FkbH-like domain. The C-terminal portion of t	99.11
TIGR02244	343	HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd	99.1
TIGR01544	277	HAD-SF-IE haloacid dehalogenase superfamily, subfa	99.09
TIGR01663	526	PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase	99.06
COG0241	181	HisB Histidinol phosphatase and related phosphatas	99.02
TIGR02137	203	HSK-PSP phosphoserine phosphatase/homoserine phosp	99.01
cd02064	180	FAD_synthetase_N FAD synthetase, N-terminal domain	99.0
PRK09484	183	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	98.95
TIGR01488	177	HAD-SF-IB Haloacid Dehalogenase superfamily, subfa	98.91
TIGR01457	249	HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr	98.89
PLN02645	311	phosphoglycolate phosphatase	98.89
PTZ00445	219	p36-lilke protein; Provisional	98.83
TIGR02251	162	HIF-SF_euk Dullard-like phosphatase domain. This d	98.82
COG0647	269	NagD Predicted sugar phosphatases of the HAD super	98.8
PRK08238	479	hypothetical protein; Validated	98.68
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	98.68
COG0560	212	SerB Phosphoserine phosphatase [Amino acid transpo	98.66
PRK10444	248	UMP phosphatase; Provisional	98.62
PF12689	169	Acid_PPase: Acid Phosphatase; InterPro: IPR010036	98.58
TIGR01525	556	ATPase-IB_hvy heavy metal translocating P-type ATP	98.53
COG4229	229	Predicted enolase-phosphatase [Energy production a	98.46
TIGR01512	536	ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo	98.39
PF08645	159	PNK3P: Polynucleotide kinase 3 phosphatase; InterP	98.38
PRK11590	211	hypothetical protein; Provisional	98.36
KOG3040	262	consensus Predicted sugar phosphatase (HAD superfa	98.24
TIGR01511	562	ATPase-IB1_Cu copper-(or silver)-translocating P-t	98.17
TIGR01460	236	HAD-SF-IIA Haloacid Dehalogenase Superfamily Class	98.15
TIGR01684	301	viral_ppase viral phosphatase. These proteins also	98.11
KOG2882	306	consensus p-Nitrophenyl phosphatase [Inorganic ion	98.06
PF09419	168	PGP_phosphatase: Mitochondrial PGP phosphatase; In	98.04
PRK10671	834	copA copper exporting ATPase; Provisional	98.01
TIGR01522	884	ATPase-IIA2_Ca golgi membrane calcium-translocatin	97.97
TIGR01456	321	CECR5 HAD-superfamily class IIA hydrolase, TIGR014	97.94
KOG1615	227	consensus Phosphoserine phosphatase [Amino acid tr	97.9
PF06888	234	Put_Phosphatase: Putative Phosphatase; InterPro: I	97.88
TIGR01545	210	YfhB_g-proteo haloacid dehalogenase superfamily, s	97.87
TIGR02250	156	FCP1_euk FCP1-like phosphatase, phosphatase domain	97.81
TIGR01533	266	lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil	97.81
PF12710	192	HAD: haloacid dehalogenase-like hydrolase; PDB: 3P	97.78
COG4087	152	Soluble P-type ATPase [General function prediction	97.7
PRK10530	272	pyridoxal phosphate (PLP) phosphatase; Provisional	97.68
PLN02645	311	phosphoglycolate phosphatase	97.62
PF05761	448	5_nucleotid: 5' nucleotidase family; InterPro: IPR	97.54
COG4359	220	Uncharacterized conserved protein [Function unknow	97.54
PRK11033	741	zntA zinc/cadmium/mercury/lead-transporting ATPase	97.53
PHA03398	303	viral phosphatase superfamily protein; Provisional	97.51
COG4996	164	Predicted phosphatase [General function prediction	97.47
COG1778	170	Low specificity phosphatase (HAD superfamily) [Gen	97.43
cd02169	297	Citrate_lyase_ligase Citrate lyase ligase. Citrate	97.3
KOG2630	254	consensus Enolase-phosphatase E-1 [Amino acid tran	97.08
TIGR01116	917	ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium	96.97
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	96.89
TIGR01497	675	kdpB K+-transporting ATPase, B subunit. One sequen	96.8
PF13344	101	Hydrolase_6: Haloacid dehalogenase-like hydrolase;	96.75
PRK00192	273	mannosyl-3-phosphoglycerate phosphatase; Reviewed	96.62
KOG3120	256	consensus Predicted haloacid dehalogenase-like hyd	96.61
PRK14010	673	potassium-transporting ATPase subunit B; Provision	96.45
PRK01122	679	potassium-transporting ATPase subunit B; Provision	96.43
TIGR01482	225	SPP-subfamily Sucrose-phosphate phosphatase subfam	96.4
TIGR01647	755	ATPase-IIIA_H plasma-membrane proton-efflux P-type	96.4
COG2217	713	ZntA Cation transport ATPase [Inorganic ion transp	96.35
PRK01158	230	phosphoglycolate phosphatase; Provisional	96.35
TIGR01517	941	ATPase-IIB_Ca plasma-membrane calcium-translocatin	96.24
TIGR01524	867	ATPase-IIIB_Mg magnesium-translocating P-type ATPa	96.24
PRK10517	902	magnesium-transporting ATPase MgtA; Provisional	96.22
smart00764	182	Citrate_ly_lig Citrate lyase ligase C-terminal dom	96.2
TIGR01487	215	SPP-like sucrose-phosphate phosphatase-like hydrol	96.11
TIGR01523	1053	ATPase-IID_K-Na potassium and/or sodium efflux P-t	96.08
TIGR01675	229	plant-AP plant acid phosphatase. This model explic	96.07
PF03031	159	NIF: NLI interacting factor-like phosphatase; Inte	96.07
TIGR01485	249	SPP_plant-cyano sucrose-6F-phosphate phosphohydrol	96.05
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	96.05
PRK15122	903	magnesium-transporting ATPase; Provisional	96.03
TIGR02471	236	sucr_syn_bact_C sucrose phosphate synthase, sucros	95.77
KOG2470	510	consensus Similar to IMP-GMP specific 5'-nucleotid	95.49
PF06574	157	FAD_syn: FAD synthetase; InterPro: IPR015864 Ribof	95.49
TIGR01106	997	ATPase-IIC_X-K sodium or proton efflux -- potassiu	95.29
COG0474	917	MgtA Cation transport ATPase [Inorganic ion transp	95.21
PF06941	191	NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol	95.13
TIGR01484	204	HAD-SF-IIB HAD-superfamily hydrolase, subfamily II	95.05
TIGR01494	499	ATPase_P-type ATPase, P-type (transporting), HAD s	94.87
TIGR00685	244	T6PP trehalose-phosphatase. At least 18 distinct s	94.33
smart00775	157	LNS2 LNS2 domain. This domain is found in Saccharo	94.32
COG5610	635	Predicted hydrolase (HAD superfamily) [General fun	94.27
TIGR00099	256	Cof-subfamily Cof subfamily of IIB subfamily of ha	93.4
COG3882	574	FkbH Predicted enzyme involved in methoxymalonyl-A	93.39
TIGR01652	1057	ATPase-Plipid phospholipid-translocating P-type AT	93.28
KOG0202	972	consensus Ca2+ transporting ATPase [Inorganic ion	93.26
TIGR01657	1054	P-ATPase-V P-type ATPase of unknown pump specifici	93.26
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	93.09
PRK10513	270	sugar phosphate phosphatase; Provisional	92.42
PRK10976	266	putative hydrolase; Provisional	91.9
PF11019	252	DUF2608: Protein of unknown function (DUF2608); In	91.13
PRK10444	248	UMP phosphatase; Provisional	91.07
TIGR01457	249	HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr	90.9
COG3700	237	AphA Acid phosphatase (class B) [General function	90.9
TIGR01658	274	EYA-cons_domain eyes absent protein conserved doma	90.88
PF03767	229	Acid_phosphat_B: HAD superfamily, subfamily IIIB (	90.88
TIGR01680	275	Veg_Stor_Prot vegetative storage protein. The prot	90.82
TIGR02461	225	osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat	90.56
TIGR01486	256	HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph	90.34
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	90.07
PF08282	254	Hydrolase_3: haloacid dehalogenase-like hydrolase;	89.86
PRK15126	272	thiamin pyrimidine pyrophosphate hydrolase; Provis	89.77
PRK03669	271	mannosyl-3-phosphoglycerate phosphatase; Reviewed	88.78
KOG2961	190	consensus Predicted hydrolase (HAD superfamily) [G	88.49
PF05152	297	DUF705: Protein of unknown function (DUF705); Inte	88.45
COG2216	681	KdpB High-affinity K+ transport system, ATPase cha	88.21
TIGR01460	236	HAD-SF-IIA Haloacid Dehalogenase Superfamily Class	88.17
COG0561	264	Cof Predicted hydrolases of the HAD superfamily [G	87.52
PLN02887	580	hydrolase family protein	87.15
KOG0204	1034	consensus Calcium transporting ATPase [Inorganic i	86.51
PRK00192	273	mannosyl-3-phosphoglycerate phosphatase; Reviewed	86.17
KOG2469	424	consensus IMP-GMP specific 5'-nucleotidase [Nucleo	85.77
PLN03190	1178	aminophospholipid translocase; Provisional	85.18
PF05822	246	UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter	84.86
TIGR01456	321	CECR5 HAD-superfamily class IIA hydrolase, TIGR014	84.43
TIGR02245	195	HAD_IIID1 HAD-superfamily subfamily IIID hydrolase	83.97
KOG3128	298	consensus Uncharacterized conserved protein [Funct	83.31
COG2503	274	Predicted secreted acid phosphatase [General funct	83.12
COG4030	315	Uncharacterized protein conserved in archaea [Func	81.61
PRK10513	270	sugar phosphate phosphatase; Provisional	81.35
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	80.15

>PLN02940 riboflavin kinase

Probab=100.00  E-value=3.2e-74  Score=556.52  Aligned_cols=356  Identities=80%  Similarity=1.345  Sum_probs=321.5

Q ss_pred             CHHHHHHHHHHHHHHcCCCCCHHHHHhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhcCCCCCchHHHHHHH
Q 017995            2 TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKH   81 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~~~L~~   81 (362)
                      |+.++.++|+++++++|.+++.++....+|.+..+.+..++..++.+...+++...+.+.+.....+..++||+.++|+.
T Consensus        25 t~~~~~~a~~~~~~~~G~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~  104 (382)
T PLN02940         25 TDGIVSDVLKAFLVKYGKQWDGREAQKIVGKTPLEAAATVVEDYGLPCSTDEFNSEITPLLSEQWCNIKALPGANRLIKH  104 (382)
T ss_pred             CHHHHHHHHHHHHHHcCCCCCHHHHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHccCCCCcCHHHHHHH
Confidence            67889999999999999988888888999999999999888888877777777777777777767788999999999999


Q ss_pred             HHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHH
Q 017995           82 LSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGK  161 (362)
Q Consensus        82 L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~  161 (362)
                      |+++|++++|+||+++..++..+.+.+++.++|+.|++++++..+||+|++|..++++++++|++|+||||+..|+++|+
T Consensus       105 Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~  184 (382)
T PLN02940        105 LKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGK  184 (382)
T ss_pred             HHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcCCCCCCHHHHHHHHHHcCCChhHEEEEeCCHHHHHHHH
Confidence            99999999999999999988888337899999999999999999999999999999999999999999999999999999


Q ss_pred             HcCCEEEEEcCCCCccccccchhHhhcccccccccccCCCCCCccccCCCCCCceeEeeeeeeccCCCccccCccccccC
Q 017995          162 AAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLS  241 (362)
Q Consensus       162 ~aG~~~i~v~~~~~~~~~~ssa~~vi~~l~el~~~~~~l~~~~~~~a~~lLgrp~~i~g~v~~G~~~g~~~lg~pTaNi~  241 (362)
                      ++|+.+++|.++.........++.++.++.++....+++|+++.|+...||||||+++|+|+||+++||+.||||||||.
T Consensus       185 ~aGi~~I~v~~g~~~~~~~~~ad~~i~sl~el~~~~~~~~~~~~~~~~~~~~~~y~~~G~Vv~G~~~G~~~lg~PTaNl~  264 (382)
T PLN02940        185 AAGMEVIAVPSIPKQTHLYSSADEVINSLLDLQPEKWGLPPFNDWIEGTLPIEPWHIGGPVIKGFGRGSKVLGIPTANLS  264 (382)
T ss_pred             HcCCEEEEECCCCcchhhccCccEEeCCHhHcCHHHcCCCCccccccCcCCcCCEEEEEEEEeCCccCcccCCCCcccCC
Confidence            99999999987543332344678899999998888899999999999999999999999999999999854899999999


Q ss_pred             CCCccccCCCCCCeEEEEEEEEccCeEEEEEEEeCCCCcccCCceeEeEeeccCCCcccCCCeEEEEEeeecCCCCCCCC
Q 017995          242 TEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPS  321 (362)
Q Consensus       242 ~~~~~~~lp~~~~GvY~~~~~~~~~~~~~~~~~iG~~pt~~~~~~~~E~~~~~~f~~~~yg~~~~v~~~~~iR~e~~f~~  321 (362)
                      +++...++|.|+.|||++|+.++++.+|+||+|||+||||++.+.+||+|||+||++|+||++|+|.|++|||+|+||+|
T Consensus       265 ~~~~~~~~~~p~~GVY~~~~~~~~~~~~~~v~niG~~Pt~~~~~~~~E~~i~~df~~dlyg~~i~v~~~~~lR~e~kF~~  344 (382)
T PLN02940        265 TENYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFNNTEKTIEPWLLHDFGEDFYGEELRLVIVGYIRPEANFPS  344 (382)
T ss_pred             cchhhhhcCCCCCEEEEEEEEECCCceEEEEEEecCCCccCCCccEEEEEEeCCCCCCCCCCeEEEEEehhcCCCCCCCC
Confidence            87643467645699999999996546899999999999998767789999993399999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHcCCccccCccCCCCcccc
Q 017995          322 LETLIAKIHEDRKVAERALDLPLYSKYRDDPYLKIT  357 (362)
Q Consensus       322 ~~~L~~qi~~d~~~~~~~~~~~~~~~~~~~~~~~~~  357 (362)
                      +|+|++||++|++.||++|+.|+|..|++|.||..|
T Consensus       345 ~~~L~~qi~~D~~~a~~~~~~~~~~~~~~~~~~~~~  380 (382)
T PLN02940        345 LESLIAKIHEDRRIAEKALDLPLYAKYKDDPYLTNS  380 (382)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCchhhhhccChhhccC
Confidence            999999999999999999999999999999999544

>TIGR00083 ribF riboflavin kinase/FMN adenylyltransferase

Probab=100.00  E-value=7.8e-50  Score=368.99  Aligned_cols=223  Identities=26%  Similarity=0.337  Sum_probs=187.5

Q ss_pred             hHHHHHHHHHHCCCcEE--------EEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCC---CHHHHHHHHHHcCC
Q 017995           74 GANRLIKHLSCHGVPMA--------LASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKP---SPDIFLEAAKRLNM  142 (362)
Q Consensus        74 gv~~~L~~L~~~g~~~~--------i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp---~p~~~~~~~~~~~~  142 (362)
                      ...+=++.|.+.|+...        ++..++++|++.+|.+.+++    +.|++|+|+++||.   +++.+...      
T Consensus        55 ~~~~k~~~l~~~Gvd~~~~~~F~~~~a~ls~e~Fi~~~l~~~l~~----~~ivvG~Df~FG~~~~G~~~~L~~~------  124 (288)
T TIGR00083        55 PLEDKARQLQIKGVEQLLVVVFDEEFANLSALQFIDQLIVKHLHV----KFLVVGDDFRFGHDRQGDFLLLQLF------  124 (288)
T ss_pred             CHHHHHHHHHHcCCCEEEEeCCCHHHHcCCHHHHHHHHHHhccCC----cEEEECCCccCCCCCCCCHHHHHHh------
Confidence            44667788888888754        45678899999887555666    89999999999865   44444443      


Q ss_pred             CCCcEEEEecCHhhHHHHHHcCCEEEEEcCCCCccccccchhHhhcccccccccccCCCCCCccccCCCCCCceeEeeee
Q 017995          143 EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPV  222 (362)
Q Consensus       143 ~p~~~l~igDs~~d~~aA~~aG~~~i~v~~~~~~~~~~ssa~~vi~~l~el~~~~~~l~~~~~~~a~~lLgrp~~i~g~v  222 (362)
                                       +.+.|+.++.++....+ ..+|| +.+++.+.++++..          |+.||||||+++|+|
T Consensus       125 -----------------~~~~g~~v~~~~~~~~~-~~ISS-T~IR~~l~~G~i~~----------A~~lLGr~y~i~G~V  175 (288)
T TIGR00083       125 -----------------GNTTIFCVIVKQLFCQD-IRISS-SAIRQALKNGDLEL----------ANKLLGRPYFICGTV  175 (288)
T ss_pred             -----------------ccccCcEEEEeccccCC-CeECH-HHHHHHHHcCCHHH----------HHHhhhhhhccceEE
Confidence                             56788888888876554 55653 56666666788774          999999999999999


Q ss_pred             eeccCCCccccCccccccCCCCccccCCCCCCeEEEEEEEEccCeEEEEEEEeCCCCcccCCceeEeEeeccCCCcccCC
Q 017995          223 VKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYD  302 (362)
Q Consensus       223 ~~G~~~g~~~lg~pTaNi~~~~~~~~lp~~~~GvY~~~~~~~~~~~~~~~~~iG~~pt~~~~~~~~E~~~~~~f~~~~yg  302 (362)
                      +||+++|| +||||||||.+++. .++|  +.|||+++|.++ +.+|+||+|||.||||++.+.++|+|||| |++|+||
T Consensus       176 v~G~~~Gr-~lGfPTaNl~~~~~-~~~p--~~GVYa~~v~i~-~~~y~~v~niG~~PT~~~~~~~~E~~ild-f~~dlYg  249 (288)
T TIGR00083       176 IHGQKLGR-TLGFPTANIKLKNQ-VLPL--KGGYYVVVVLLN-GEPYPGVGNIGNRPTFIGQQLVIEVHLLD-FSGELYG  249 (288)
T ss_pred             EecCCCcc-cccCceEEecCccc-ccCC--CcceEEEEEEeC-CeEEEEEEEeCCCCccCCCceEEEEEeCC-CCcccCC
Confidence            99999998 59999999998775 5666  489999999985 58899999999999998766789999998 9999999


Q ss_pred             CeEEEEEeeecCCCCCCCCHHHHHHHHHHHHHHHHHHcC
Q 017995          303 EELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALD  341 (362)
Q Consensus       303 ~~~~v~~~~~iR~e~~f~~~~~L~~qi~~d~~~~~~~~~  341 (362)
                      ++++|+|++|||+|+||+|+|+|++||++|++.||++|+
T Consensus       250 ~~i~v~f~~~iR~e~kF~s~~~L~~qI~~D~~~ar~~~~  288 (288)
T TIGR00083       250 QEIKVTLVKKIRPEQKFSSLDELKNQIQQDILQAKKWFN  288 (288)
T ss_pred             CEEEEEeHHhccCCCCcCCHHHHHHHHHHHHHHHHHHhC
Confidence            999999999999999999999999999999999999874

multifunctional enzyme: riboflavin kinase (EC 2.7.1.26) (flavokinase) / FMN adenylyltransferase (EC 2.7.7.2) (FAD pyrophosphorylase) (FAD synthetase).

>PRK05627 bifunctional riboflavin kinase/FMN adenylyltransferase; Reviewed

Probab=100.00  E-value=2e-47  Score=356.45  Aligned_cols=223  Identities=30%  Similarity=0.394  Sum_probs=188.2

Q ss_pred             hHHHHHHHHHHCCCcEEEE--------cCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCC---CHHHHHHHHHHcCC
Q 017995           74 GANRLIKHLSCHGVPMALA--------SNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKP---SPDIFLEAAKRLNM  142 (362)
Q Consensus        74 gv~~~L~~L~~~g~~~~i~--------S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp---~p~~~~~~~~~~~~  142 (362)
                      -..+=++.|++.|+...++        +.++++|++.+|.+.++.    +.|++|+|+++|+.   +.+.+...      
T Consensus        71 t~eeR~~~l~~~gVD~~~~~~F~~~~~~ls~e~Fi~~~l~~~l~~----~~iVvG~Df~FG~~~~G~~~~L~~~------  140 (305)
T PRK05627         71 PLRDKAELLAELGVDYVLVLPFDEEFAKLSAEEFIEDLLVKGLNA----KHVVVGFDFRFGKKRAGDFELLKEA------  140 (305)
T ss_pred             CHHHHHHHHHHcCCCEEEEecCCHHHhcCCHHHHHHHHHHhccCC----CEEEECCCCCCCCCCCCCHHHHHHH------
Confidence            4466677888888887664        457899999877455665    89999999999864   44444433      


Q ss_pred             CCCcEEEEecCHhhHHHHHHcCCEEEEEcCCCCccccccchhHhhcccccccccccCCCCCCccccCCCCCCceeEeeee
Q 017995          143 EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPV  222 (362)
Q Consensus       143 ~p~~~l~igDs~~d~~aA~~aG~~~i~v~~~~~~~~~~ssa~~vi~~l~el~~~~~~l~~~~~~~a~~lLgrp~~i~g~v  222 (362)
                                       +++.|+.++.++....++..+|| +.+++.+.++++..          |+.||||||+++|+|
T Consensus       141 -----------------~~~~g~~v~~v~~~~~~~~~ISS-T~IR~~I~~G~i~~----------A~~lLg~~y~~~g~V  192 (305)
T PRK05627        141 -----------------GKEFGFEVTIVPEVKEDGERVSS-TAIRQALAEGDLEL----------ANKLLGRPYSISGRV  192 (305)
T ss_pred             -----------------HHHcCcEEEEeccEecCCCcCch-HHHHHHHHcCCHHH----------HHhhhcCCCceEEEE
Confidence                             56788999999886666666654 66666666788774          999999999999999


Q ss_pred             eeccCCCccccCccccccCCCCccccCCCCCCeEEEEEEEEccCeEEEEEEEeCCCCcccCCceeEeEeeccCCCcccCC
Q 017995          223 VKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYD  302 (362)
Q Consensus       223 ~~G~~~g~~~lg~pTaNi~~~~~~~~lp~~~~GvY~~~~~~~~~~~~~~~~~iG~~pt~~~~~~~~E~~~~~~f~~~~yg  302 (362)
                      +||+++|| +||||||||.+++.  ++|  +.|||++|+.++ +.+|+||+|||+||||++.+.++|+|||| |++|+||
T Consensus       193 ~~G~~~Gr-~lgfPTaNl~~~~~--~~p--~~GVY~~~~~i~-~~~y~~~~~iG~~ptf~~~~~~~E~~i~d-f~~d~Yg  265 (305)
T PRK05627        193 VHGQKLGR-TLGFPTANLPLPDR--VLP--ADGVYAVRVKVD-GKPYPGVANIGTRPTVDGGRQLLEVHLLD-FNGDLYG  265 (305)
T ss_pred             EECcccCc-cccceeEeecCccC--CCC--CceEEEEEEEEC-CEEEEEEEEecCCCccCCCceEEEEEecC-CCCccCC
Confidence            99999998 59999999998774  346  489999999995 58999999999999998767789999998 9999999


Q ss_pred             CeEEEEEeeecCCCCCCCCHHHHHHHHHHHHHHHHHHcC
Q 017995          303 EELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALD  341 (362)
Q Consensus       303 ~~~~v~~~~~iR~e~~f~~~~~L~~qi~~d~~~~~~~~~  341 (362)
                      ++++|+|++|||+|+||+|+|+|++||++|++.||++|.
T Consensus       266 ~~i~v~~~~~iR~e~kF~s~~~L~~~i~~D~~~a~~~~~  304 (305)
T PRK05627        266 EHITVEFLKKLRDEQKFDSLDELKAQIAKDIETARAFLA  304 (305)
T ss_pred             CEEEEEEhhhcCCCCCcCCHHHHHHHHHHHHHHHHHHhh
Confidence            999999999999999999999999999999999999875

>PF01687 Flavokinase: Riboflavin kinase; InterPro: IPR015865 Riboflavin is converted into catalytically active cofactors (FAD and FMN) by the actions of riboflavin kinase (2

Probab=100.00  E-value=6.2e-48  Score=312.40  Aligned_cols=125  Identities=39%  Similarity=0.714  Sum_probs=109.9

Q ss_pred             CCCCceeEeeeeeeccCCCccccCccccccCCCCccccCCCCCCeEEEEEEEEccCeEEEEEEEeCCCCcccCCceeEeE
Q 017995          211 LPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEP  290 (362)
Q Consensus       211 lLgrp~~i~g~v~~G~~~g~~~lg~pTaNi~~~~~~~~lp~~~~GvY~~~~~~~~~~~~~~~~~iG~~pt~~~~~~~~E~  290 (362)
                      ||||||+++|+|+||+++|| +||||||||.++.. .++|+  .|||++|+.++ +.+|+||+|||+||||++...+|||
T Consensus         1 LLG~py~i~G~Vv~G~~~Gr-~lGfPTANl~~~~~-~~~p~--~GVYa~~v~~~-~~~~~~v~niG~~PTf~~~~~~vE~   75 (125)
T PF01687_consen    1 LLGRPYSISGTVVHGFGRGR-KLGFPTANLDIPDD-KLLPK--EGVYAVWVRVD-GKWYPGVTNIGYRPTFDGKERTVEV   75 (125)
T ss_dssp             HHTSSEEEEEEEEC-SSCCC-CTTS-EEEEEEHCC-CTCCC--TEEEEEEEEET-SEEEEEEEEEEEETTTSSCEEEEEE
T ss_pred             CcCCCEEEEEEEEeCCcccc-ccCCccccccCCcc-ccccc--CEEEEEEEEEC-CEEEEeEEEecCCCccCcCceeEEE
Confidence            57999999999999999998 59999999999554 67884  79999999995 6899999999999999888899999


Q ss_pred             eeccCCCcccCCCeEEEEEeeecCCCCCCCCHHHHHHHHHHHHHHHHHHcC
Q 017995          291 WLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALD  341 (362)
Q Consensus       291 ~~~~~f~~~~yg~~~~v~~~~~iR~e~~f~~~~~L~~qi~~d~~~~~~~~~  341 (362)
                      |||| |++|+||++|+|.|++|||+|+||+|+|+|++||++|++.||++|+
T Consensus        76 hild-f~~dlYg~~i~v~~~~~lR~e~kF~s~e~L~~qI~~D~~~a~~~lq  125 (125)
T PF01687_consen   76 HILD-FDGDLYGKKIKVEFLKFLRPEKKFDSLEELKEQIKKDIEQARKYLQ  125 (125)
T ss_dssp             EETT-SSSE-TTSEEEEEEEEEEEE----SSHHHHHHHHHHHHHHHHHHH-
T ss_pred             EEec-cCcccCCCeEEEEEEeCccCCcccCCHHHHHHHHHHHHHHHHHhcC
Confidence            9998 9999999999999999999999999999999999999999999984

7.1.26 from EC), which converts it into FMN, and FAD synthetase (2.7.7.2 from EC), which adenylates FMN to FAD. Eukaryotes usually have two separate enzymes, while most prokaryotes have a single bifunctional protein that can carry out both catalyses, although exceptions occur in both cases. While eukaryotic monofunctional riboflavin kinase is orthologous to the bifunctional prokaryotic enzyme [], the monofunctional FAD synthetase differs from its prokaryotic counterpart, and is instead related to the PAPS-reductase family []. The bacterial FAD synthetase that is part of the bifunctional enzyme has remote similarity to nucleotidyl transferases and, hence, it may be involved in the adenylylation reaction of FAD synthetases []. This entry represents the riboflavin kinase domains from bacteria and eukaryotes.; GO: 0008531 riboflavin kinase activity, 0009231 riboflavin biosynthetic process; PDB: 1Q9S_A 1NB9_A 1P4M_A 1NB0_A 3OP1_B 1T6Z_A 2I1L_A 1T6Y_B 1T6X_B 1S4M_A ....

>COG0196 RibF FAD synthase [Coenzyme metabolism]

Probab=100.00  E-value=9.7e-47  Score=347.49  Aligned_cols=224  Identities=29%  Similarity=0.419  Sum_probs=187.7

Q ss_pred             hHHHHHHHHHHCCCcEE--------EEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 017995           74 GANRLIKHLSCHGVPMA--------LASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS  145 (362)
Q Consensus        74 gv~~~L~~L~~~g~~~~--------i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~  145 (362)
                      ...+=++.|...|+...        +++.++++|++ .+.+.++.    +.|++|+||++||..........        
T Consensus        73 ~~~~k~~~l~~~gvd~~~v~~F~~~fa~ls~~~Fv~-~lv~~l~~----k~ivvG~DF~FGk~~~g~~~~L~--------  139 (304)
T COG0196          73 PLREKIRLLAGYGVDALVVLDFDLEFANLSAEEFVE-LLVEKLNV----KHIVVGFDFRFGKGRQGNAELLR--------  139 (304)
T ss_pred             CHHHHHHHHHhcCCcEEEEEeCCHhHhhCCHHHHHH-HHHhccCC----cEEEEecccccCCCCCCCHHHHH--------
Confidence            35566788888886654        55778999999 44477765    78999999999987544322211        


Q ss_pred             cEEEEecCHhhHHHHHHcCCEEEEEcCCCCccccccchhHhhcccccccccccCCCCCCccccCCCCCCceeEeeeeeec
Q 017995          146 SSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKG  225 (362)
Q Consensus       146 ~~l~igDs~~d~~aA~~aG~~~i~v~~~~~~~~~~ssa~~vi~~l~el~~~~~~l~~~~~~~a~~lLgrp~~i~g~v~~G  225 (362)
                                  ..+.+ |+.|+.++....++.++|| +.+++.+.+++++.          |+.+|||||++.|+|+||
T Consensus       140 ------------~~~~~-gf~v~~v~~~~~~~~~iSS-t~IR~~L~~gdl~~----------A~~lLG~py~i~G~Vv~G  195 (304)
T COG0196         140 ------------ELGQK-GFEVTIVPKINEEGIRISS-TAIRQALREGDLEE----------ANKLLGRPYSIEGKVVHG  195 (304)
T ss_pred             ------------HhccC-CceEEEeccEecCCcEEch-HHHHHHHhcCCHHH----------HHHhcCCCeEEEEEEEcc
Confidence                        12455 9999999998777777764 66666666788774          999999999999999999


Q ss_pred             cCCCccccCccccccCCCCccccCCCCCCeEEEEEEEEccCeEEEEEEEeCCCCcccCCceeEeEeeccCCCcccCCCeE
Q 017995          226 LGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEEL  305 (362)
Q Consensus       226 ~~~g~~~lg~pTaNi~~~~~~~~lp~~~~GvY~~~~~~~~~~~~~~~~~iG~~pt~~~~~~~~E~~~~~~f~~~~yg~~~  305 (362)
                      +++|| +||||||||.++..  .+|  +.|||++++.+.+ ..|+||+|||+|||+++..+++|+|||| |++|+||+.+
T Consensus       196 ~~~Gr-~lGfPTaNi~~~~~--~~~--~~GVYav~v~~~~-~~~~gv~~vG~rpt~~~~~~~lEvhi~D-f~~dlYG~~i  268 (304)
T COG0196         196 QKLGR-TLGFPTANIYLKDN--VLP--AFGVYAVRVKLDG-GVYPGVANVGYRPTVDGSERSLEVHILD-FNGDLYGERV  268 (304)
T ss_pred             ccccc-ccCCCccccccccc--ccc--CCeeEEEEEEECC-ccccceEEecccccccCCeeEEEEEEec-ccccccCceE
Confidence            99998 59999999998874  555  4899999999864 3499999999999998878999999999 9999999999


Q ss_pred             EEEEeeecCCCCCCCCHHHHHHHHHHHHHHHHHHcC
Q 017995          306 HLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALD  341 (362)
Q Consensus       306 ~v~~~~~iR~e~~f~~~~~L~~qi~~d~~~~~~~~~  341 (362)
                      +|.|++|||+|+||+|+|+|++||++|++.||++|+
T Consensus       269 ~v~~~~~iR~e~kF~s~d~L~~qi~~D~~~Ar~~~~  304 (304)
T COG0196         269 KVRFLKFIRDEKKFDSLDELKEQIEKDIERARKLLA  304 (304)
T ss_pred             EEEEhhhcccccCCCCHHHHHHHHHHHHHHHHHHhC
Confidence            999999999999999999999999999999999874

>KOG3110 consensus Riboflavin kinase [Coenzyme transport and metabolism]

Probab=100.00  E-value=1e-41  Score=267.38  Aligned_cols=149  Identities=54%  Similarity=1.020  Sum_probs=135.4

Q ss_pred             cCCCCCCceeEeeeeeeccCCCccccCccccccCCCCccccCCCCCCeEEEEEEEEccCeEEEEEEEeCCCCcccCCcee
Q 017995          208 EGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKT  287 (362)
Q Consensus       208 a~~lLgrp~~i~g~v~~G~~~g~~~lg~pTaNi~~~~~~~~lp~~~~GvY~~~~~~~~~~~~~~~~~iG~~pt~~~~~~~  287 (362)
                      ++.+.--||...|.||+|.+||+++||+||||+.......++-....|||.+|+.++.+..|++++||||||.+++++++
T Consensus         5 ~~~~~~~P~~~~g~VVrGFGRGskeLGiPTAN~~~~~v~~l~~~l~~GvYfG~A~v~~~~v~kMvmSIGwNP~Y~N~~Kt   84 (153)
T KOG3110|consen    5 AQPMSPLPLFFGGEVVRGFGRGSKELGIPTANFPENVVPKLPEDLPSGVYFGWAHVDKGDVFKMVMSIGWNPYYKNKKKT   84 (153)
T ss_pred             cccCCCCCEEecCeEEEecCCCccccCCccCCCCHHHHhcccccCCCceEEEeeeecCCCceeEEEEcccCcccCCcccc
Confidence            34455569999999999999999999999999986554333333447999999999877899999999999999998999


Q ss_pred             EeEeeccCCCcccCCCeEEEEEeeecCCCCCCCCHHHHHHHHHHHHHHHHHHcCCccccCccCCCCccc
Q 017995          288 IEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYLKI  356 (362)
Q Consensus       288 ~E~~~~~~f~~~~yg~~~~v~~~~~iR~e~~f~~~~~L~~qi~~d~~~~~~~~~~~~~~~~~~~~~~~~  356 (362)
                      +|+|+++||..|+||+++++..++|||||+.|+|+|+|++.|+-||+.|++.|+.|.|++|++|+||++
T Consensus        85 ~E~hlih~f~~DFYge~l~~~IvGyiRpe~nf~slesLi~~I~~Di~vA~~~l~~p~~~k~K~dpff~~  153 (153)
T KOG3110|consen   85 MELHLIHDFGEDFYGETLKVIIVGYIRPELNFDSLESLIEAIHGDIEVAKKVLDLPEYAKFKEDPFFTV  153 (153)
T ss_pred             eeeeeehhcccchhhheeeEEEEEeeccccCcchHHHHHHHHHhhHHHHHHhhcCcchhhhccCCcccC
Confidence            999999999999999999999999999999999999999999999999999999999999999999963

>PRK07143 hypothetical protein; Provisional

Probab=100.00  E-value=1.2e-36  Score=279.32  Aligned_cols=200  Identities=17%  Similarity=0.133  Sum_probs=159.1

Q ss_pred             chHHHHHHHHHHCCCcEEE--------EcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCC
Q 017995           73 PGANRLIKHLSCHGVPMAL--------ASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP  144 (362)
Q Consensus        73 pgv~~~L~~L~~~g~~~~i--------~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p  144 (362)
                      -...+=++.|++.|+...+        +..++++|++.++ . ++.    +.||+|+|+++||........+.+ +    
T Consensus        65 ~~~~er~~~l~~~Gvd~~~~~~F~~~~a~ls~e~Fi~~ll-~-l~~----~~iVvG~Df~FG~~r~G~~~~L~~-~----  133 (279)
T PRK07143         65 SDLNSRLQTLANLGFKNIILLDFNEELQNLSGNDFIEKLT-K-NQV----SFFVVGKDFRFGKNASWNADDLKE-Y----  133 (279)
T ss_pred             CCHHHHHHHHHHCCCCEEEEeCCCHHHhCCCHHHHHHHHH-h-cCC----CEEEECCCcccCCCCCCCHHHHHH-h----
Confidence            3445666788888887654        3458899998766 4 554    789999999999765443333211 1    


Q ss_pred             CcEEEEecCHhhHHHHHHcCCEEEEEcCCCCccccccchhHhhcccccccccccCCCCCCccccCCCCCCceeEeeeeee
Q 017995          145 SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVK  224 (362)
Q Consensus       145 ~~~l~igDs~~d~~aA~~aG~~~i~v~~~~~~~~~~ssa~~vi~~l~el~~~~~~l~~~~~~~a~~lLgrp~~i~g~v~~  224 (362)
                                        .+ .+..++....++..+|| +.+++.+.++++..          |++||||||+++|+|+|
T Consensus       134 ------------------~~-~v~~v~~~~~~g~~ISS-T~IR~~l~~G~i~~----------A~~lLGr~y~i~G~V~~  183 (279)
T PRK07143        134 ------------------FP-NVHIVEILKINQQKIST-SLLKEFIEFGDIEL----------LNSLLLYNYSISITINK  183 (279)
T ss_pred             ------------------CC-cEEEeCCEEcCCcEEcH-HHHHHHHHcCCHHH----------HHHHcCCCcEEEEEEEC
Confidence                              11 56667765555666654 56666666788774          99999999999999999


Q ss_pred             ccCCCccccCccccccCCCCccccCCCCCCeEEEEEEEEccCeEEEEEEEeCCCCcccCCceeEeEeeccCCCc--ccCC
Q 017995          225 GLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDE--DFYD  302 (362)
Q Consensus       225 G~~~g~~~lg~pTaNi~~~~~~~~lp~~~~GvY~~~~~~~~~~~~~~~~~iG~~pt~~~~~~~~E~~~~~~f~~--~~yg  302 (362)
                      |            ||+.+++. .++|+  .|||+++|.++ +.+|+||+|||.|||       +|||||| |++  |+||
T Consensus       184 G------------aNl~~~~~-~~~P~--~GVYa~~v~~~-~~~y~~v~niG~~PT-------iE~hild-f~~~~dlYg  239 (279)
T PRK07143        184 N------------FEFTYPQN-IIKLH--AGIYLAYVVIN-NFKYHGILKINFNNK-------NKIKFFD-FDLIINKYQ  239 (279)
T ss_pred             C------------eEeCCCcC-cCCCC--CcEEEEEEEEC-CEEEEEEEEecCCce-------EEEEEec-CCCCcCCCC
Confidence            8            89998765 67774  89999999984 689999999999999       8999998 999  8999


Q ss_pred             CeEEEEEeeecCCCCCCCCHHHHHHHHHHHHHHHHHHcCC
Q 017995          303 EELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDL  342 (362)
Q Consensus       303 ~~~~v~~~~~iR~e~~f~~~~~L~~qi~~d~~~~~~~~~~  342 (362)
                       +|+|+|++|||+|+||+| +   +||++|++.||++|+.
T Consensus       240 -~i~v~f~~~iR~e~kF~s-~---~qi~~D~~~a~~~~~~  274 (279)
T PRK07143        240 -EIFIEIVKEIRIISSNED-N---NILNDDIEIAKKFFLN  274 (279)
T ss_pred             -EEEEEEhhccCCCcCCCc-H---HHHHHHHHHHHHHHHh
Confidence             999999999999999999 5   8899999999999964

>PLN02811 hydrolase

Probab=99.93  E-value=9.3e-25  Score=196.70  Aligned_cols=195  Identities=39%  Similarity=0.656  Sum_probs=161.5

Q ss_pred             CHHHHHHHHHHHHHHcCCCCCHHHHHhhcCCCHHHHHHHHHHHhCCCC--CHHHHHHHHHHHHHhhhcCCCCCchHHHHH
Q 017995            2 TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPC--AKHEFVNEVYSMFSDHLCKVKALPGANRLI   79 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~pgv~~~L   79 (362)
                      |+.++..+|+++++++|++++.+....++|.+..+.+..+.+..+.+.  ..+++.+....++........++||+.++|
T Consensus         8 s~~~~~~a~~~~~~~~g~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gv~e~l   87 (220)
T PLN02811          8 TEKFYTEVQEKILARYGKTFDWSLKAKMMGKKAIEAARIFVEESGLSDSLSPEDFLVEREAMLQDLFPTSDLMPGAERLV   87 (220)
T ss_pred             cHHHHHHHHHHHHHHcCCCCCHHHHHHccCCCHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhhCCCCccHHHHH
Confidence            688999999999999999888777788999999998888888777652  344555555555555455688999999999


Q ss_pred             HHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCC--CCCCCCCCHHHHHHHHHHcC---CCCCcEEEEecCH
Q 017995           80 KHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD--EVRTGKPSPDIFLEAAKRLN---MEPSSSLVIEDSV  154 (362)
Q Consensus        80 ~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~--d~~~gKp~p~~~~~~~~~~~---~~p~~~l~igDs~  154 (362)
                      +.|+++|++++|+||+....+...+.+..++.++|+.+++++  ++..+||+|++|..++++++   +.|++|+||||+.
T Consensus        88 ~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~~v~IgDs~  167 (220)
T PLN02811         88 RHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPVDPGKVLVFEDAP  167 (220)
T ss_pred             HHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCCCCccceEEEeccH
Confidence            999999999999999988755544424557889999999999  88889999999999999997   9999999999999


Q ss_pred             hhHHHHHHcCCEEEEEcCCCCccccccchhHhhccccccccc
Q 017995          155 IGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPE  196 (362)
Q Consensus       155 ~d~~aA~~aG~~~i~v~~~~~~~~~~ssa~~vi~~l~el~~~  196 (362)
                      .|+++|+++|+++|+|.++.........++.+++++.++...
T Consensus       168 ~di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vi~~~~e~~~~  209 (220)
T PLN02811        168 SGVEAAKNAGMSVVMVPDPRLDKSYCKGADQVLSSLLDFKPE  209 (220)
T ss_pred             hhHHHHHHCCCeEEEEeCCCCcHhhhhchhhHhcCHhhCCHH
Confidence            999999999999999987543322334568899999886544

>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]

Probab=99.92  E-value=4.8e-24  Score=191.95  Aligned_cols=171  Identities=33%  Similarity=0.483  Sum_probs=149.6

Q ss_pred             CHHHHHHHHHHHHHHcCCCCCHHHHHhhcCCCHHHHHHHHHHHhCCCC--CHHHHHHHHHHHHHhhhcCCCCCchHHHHH
Q 017995            2 TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPC--AKHEFVNEVYSMFSDHLCKVKALPGANRLI   79 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~pgv~~~L   79 (362)
                      |+.++.++|.++++++|++++.+.....+|....+....+........  +...................+++||+.++|
T Consensus        16 se~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pGv~~~l   95 (221)
T COG0637          16 SEPLHARAWLEALKEYGIEISDEEIRELHGGGIARIIDLLRKLAAGEDPADLAELERLLYEAEALELEGLKPIPGVVELL   95 (221)
T ss_pred             chHHHHHHHHHHHHHcCCCCCHHHHHHHHCCChHHHHHHHHHHhcCCcccCHHHHHHHHHHHHHhhhcCCCCCccHHHHH
Confidence            789999999999999999999988888899888888888877665432  222333333333334446799999999999


Q ss_pred             HHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHH
Q 017995           80 KHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA  159 (362)
Q Consensus        80 ~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~a  159 (362)
                      +.|+++|++++++|++++..++..| +.+|+.++|+.+++++|+..+||+|++|+.+++++|++|++||+|+||.+|+++
T Consensus        96 ~~L~~~~i~~avaS~s~~~~~~~~L-~~~gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P~~CvviEDs~~Gi~A  174 (221)
T COG0637          96 EQLKARGIPLAVASSSPRRAAERVL-ARLGLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVDPEECVVVEDSPAGIQA  174 (221)
T ss_pred             HHHHhcCCcEEEecCChHHHHHHHH-HHccChhhcchhccHHHHhcCCCCCHHHHHHHHHcCCChHHeEEEecchhHHHH
Confidence            9999999999999999999999999 899999999999999999999999999999999999999999999999999999


Q ss_pred             HHHcCCEEEEEcCC
Q 017995          160 GKAAGMEVVAVPSL  173 (362)
Q Consensus       160 A~~aG~~~i~v~~~  173 (362)
                      |+++||.++++...
T Consensus       175 a~aAGm~vv~v~~~  188 (221)
T COG0637         175 AKAAGMRVVGVPAG  188 (221)
T ss_pred             HHHCCCEEEEecCC
Confidence            99999999999873

>PLN03243 haloacid dehalogenase-like hydrolase; Provisional

Probab=99.92  E-value=5e-24  Score=196.19  Aligned_cols=168  Identities=22%  Similarity=0.287  Sum_probs=140.3

Q ss_pred             HHHHHHHHHHHHHcCCCCCHHHH-HhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhh-cCCCCCchHHHHHHH
Q 017995            4 GMFSEVLKTFLVKYGKEWDGREK-HKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHL-CKVKALPGANRLIKH   81 (362)
Q Consensus         4 ~~~~~a~~~~l~~~g~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~pgv~~~L~~   81 (362)
                      .++.++|+++++++|++++.++. +++.|.+..+.++.+..........+++...+...+.... ...+++||+.++|+.
T Consensus        41 ~~~~~a~~~~~~~~G~~~~~~e~~~~~~G~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~pg~~e~L~~  120 (260)
T PLN03243         41 ELERKAWRALAEEEGKRPPPAFLLKRAEGMKNEQAISEVLCWSRDFLQMKRLAIRKEDLYEYMQGGLYRLRPGSREFVQA  120 (260)
T ss_pred             HHHHHHHHHHHHHcCCCCCHHHHHHHhcCCCHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHccCcccCCCHHHHHHH
Confidence            57788999999999998776544 6789999988887765421110012334444444443322 357899999999999


Q ss_pred             HHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHH
Q 017995           82 LSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGK  161 (362)
Q Consensus        82 L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~  161 (362)
                      |+++|++++|+||++...++..+ +++|+.++|+.|++++++..+||+|++|..++++++++|++|+||||+..|+++|+
T Consensus       121 L~~~g~~l~I~Tn~~~~~~~~~l-~~~gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~  199 (260)
T PLN03243        121 LKKHEIPIAVASTRPRRYLERAI-EAVGMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERCIVFGNSNSSVEAAH  199 (260)
T ss_pred             HHHCCCEEEEEeCcCHHHHHHHH-HHcCCHhhCcEEEecccCCCCCCCHHHHHHHHHHhCCChHHeEEEcCCHHHHHHHH
Confidence            99999999999999999999888 89999999999999999999999999999999999999999999999999999999


Q ss_pred             HcCCEEEEEcC
Q 017995          162 AAGMEVVAVPS  172 (362)
Q Consensus       162 ~aG~~~i~v~~  172 (362)
                      ++|+.++++..
T Consensus       200 ~aG~~~i~v~g  210 (260)
T PLN03243        200 DGCMKCVAVAG  210 (260)
T ss_pred             HcCCEEEEEec
Confidence            99999999964

>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic

Probab=99.92  E-value=1.3e-23  Score=187.77  Aligned_cols=191  Identities=20%  Similarity=0.244  Sum_probs=158.2

Q ss_pred             CHHHHHHHHHHHHHHcCCC-CCHHHHHhhcCCCHHHHHHHHHHHhCCCCCH---HHHHHHHHHHHHhhh-cCCCCCchHH
Q 017995            2 TDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPCAK---HEFVNEVYSMFSDHL-CKVKALPGAN   76 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~pgv~   76 (362)
                      |+..+..+++++++++|.+ ++.+.+...+|.+..+.++.+.+.++.+.+.   +++...+...|.... ...+++||+.
T Consensus        12 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   91 (213)
T TIGR01449        12 SAPDIAAAVNMALAALGLPPATLARVIGFIGNGVPVLMERVLAWAGQEPDAQRVAELRKLFDRHYEEVAGELTSVFPGVE   91 (213)
T ss_pred             CHHHHHHHHHHHHHHCCCCCCCHHHHHHHhcccHHHHHHHHhhccccccChHHHHHHHHHHHHHHHHhccccCccCCCHH
Confidence            5678889999999999986 5777788888999888888877766655443   334444555555444 3578999999


Q ss_pred             HHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhh
Q 017995           77 RLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG  156 (362)
Q Consensus        77 ~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d  156 (362)
                      ++|+.|+++|++++|+||++...++..+ +++|+.++|+.+++++++..+||+|+.|..++++++++|++|+||||+..|
T Consensus        92 ~~L~~l~~~g~~~~i~S~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~igDs~~d  170 (213)
T TIGR01449        92 ATLGALRAKGLRLGLVTNKPTPLARPLL-ELLGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQMVYVGDSRVD  170 (213)
T ss_pred             HHHHHHHHCCCeEEEEeCCCHHHHHHHH-HHcCcHhhCcEEEecCCCCCCCCChHHHHHHHHHcCCChhHeEEeCCCHHH
Confidence            9999999999999999999999999888 899999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCEEEEEcCCCCcccc--ccchhHhhcccccc
Q 017995          157 VVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDL  193 (362)
Q Consensus       157 ~~aA~~aG~~~i~v~~~~~~~~~--~ssa~~vi~~l~el  193 (362)
                      +++|+++|+.++++.++......  ...++.++.++.++
T Consensus       171 ~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~~~~l  209 (213)
T TIGR01449       171 IQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDSLNEL  209 (213)
T ss_pred             HHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCCHHHH
Confidence            99999999999999875432211  23456777776653

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).

>PLN02770 haloacid dehalogenase-like hydrolase family protein

Probab=99.92  E-value=8.7e-24  Score=193.78  Aligned_cols=189  Identities=25%  Similarity=0.319  Sum_probs=151.7

Q ss_pred             CHHHHHHHHHHHHHHcCC----CCCHHHH-HhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhh-cCCCCCchH
Q 017995            2 TDGMFSEVLKTFLVKYGK----EWDGREK-HKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHL-CKVKALPGA   75 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~----~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~pgv   75 (362)
                      |+..+.++|+++++++|.    +++.+.. ..+.|.+..+.+..+... ... ...++...+...|.... ....++||+
T Consensus        36 s~~~~~~a~~~~~~~~g~~~g~~~~~~~~~~~~~G~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~y~~~~~~~~~l~pgv  113 (248)
T PLN02770         36 SDPLHYYAFREMLQEINFNGGVPITEEFFVENIAGKHNEDIALGLFPD-DLE-RGLKFTDDKEALFRKLASEQLKPLNGL  113 (248)
T ss_pred             CHHHHHHHHHHHHHHhccccCCCCCHHHHHHHcCCCCHHHHHHHHcCc-chh-hHHHHHHHHHHHHHHHHHhcCCcCccH
Confidence            678899999999999964    4555543 567888888777655432 111 11223344455555544 468999999


Q ss_pred             HHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHh
Q 017995           76 NRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVI  155 (362)
Q Consensus        76 ~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~  155 (362)
                      .++|+.|+++|++++|+||++...++..+ +++|+.++|+.|++++++..+||+|+.|..++++++++|++|+||||+..
T Consensus       114 ~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l-~~~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~~l~vgDs~~  192 (248)
T PLN02770        114 YKLKKWIEDRGLKRAAVTNAPRENAELMI-SLLGLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDHTFVFEDSVS  192 (248)
T ss_pred             HHHHHHHHHcCCeEEEEeCCCHHHHHHHH-HHcCChhhCcEEEecCcCCCCCCChHHHHHHHHHhCCChhHEEEEcCCHH
Confidence            99999999999999999999999999999 89999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHcCCEEEEEcCCCCcccc-ccchhHhhcccccc
Q 017995          156 GVVAGKAAGMEVVAVPSLPKQTHR-YTAADEVINSLLDL  193 (362)
Q Consensus       156 d~~aA~~aG~~~i~v~~~~~~~~~-~ssa~~vi~~l~el  193 (362)
                      |+++|+++|+.++++.++...... ...++.++.++.+.
T Consensus       193 Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~~e~  231 (248)
T PLN02770        193 GIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDYEDP  231 (248)
T ss_pred             HHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccchhh
Confidence            999999999999999875422211 22456777777763

>PLN02575 haloacid dehalogenase-like hydrolase

Probab=99.92  E-value=1.1e-23  Score=201.14  Aligned_cols=192  Identities=26%  Similarity=0.287  Sum_probs=157.5

Q ss_pred             CHH-HHHHHHHHHHHHcCCCCCHH-HHHhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhh-cCCCCCchHHHH
Q 017995            2 TDG-MFSEVLKTFLVKYGKEWDGR-EKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHL-CKVKALPGANRL   78 (362)
Q Consensus         2 Se~-~~~~a~~~~l~~~g~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~pgv~~~   78 (362)
                      |+. ++.++|+++++++|++++.+ .+..+.|.+..+.+..+......+...+++...+.+.|.+.. ....++||+.++
T Consensus       145 S~~~i~~~a~~~l~~e~G~~~~~~e~~~~~~G~~~~~~l~~ll~~~~~~~~~e~l~~~~~~~y~~~~~~~~~l~pGa~El  224 (381)
T PLN02575        145 DNPDLENQAWLTLAQEEGKSPPPAFILRRVEGMKNEQAISEVLCWSRDPAELRRMATRKEEIYQALQGGIYRLRTGSQEF  224 (381)
T ss_pred             CHHHHHHHHHHHHHHHcCCCCCHHHHHHHhcCCCHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHhccCCCcCcCHHHH
Confidence            444 67789999999999987665 457899999999888776533222223445555566665544 357899999999


Q ss_pred             HHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHH
Q 017995           79 IKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVV  158 (362)
Q Consensus        79 L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~  158 (362)
                      |+.|+++|++++|+||++...++..+ +++||.++|+.|++++++..+||+|++|..+++++|+.|++|+||||+..|++
T Consensus       225 L~~Lk~~GiklaIaSn~~~~~~~~~L-~~lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Peecl~IGDS~~DIe  303 (381)
T PLN02575        225 VNVLMNYKIPMALVSTRPRKTLENAI-GSIGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCIVFGNSNQTVE  303 (381)
T ss_pred             HHHHHHCCCeEEEEeCCCHHHHHHHH-HHcCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHH
Confidence            99999999999999999999999999 89999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCEEEEEcCCCCccccccchhHhhcccccccc
Q 017995          159 AGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRP  195 (362)
Q Consensus       159 aA~~aG~~~i~v~~~~~~~~~~ssa~~vi~~l~el~~  195 (362)
                      +|+++||.+|+|.+..... ....++.+++++.++..
T Consensus       304 AAk~AGm~~IgV~~~~~~~-~l~~Ad~iI~s~~EL~~  339 (381)
T PLN02575        304 AAHDARMKCVAVASKHPIY-ELGAADLVVRRLDELSI  339 (381)
T ss_pred             HHHHcCCEEEEECCCCChh-HhcCCCEEECCHHHHHH
Confidence            9999999999998643222 22345667788877643

>PRK10826 2-deoxyglucose-6-phosphatase; Provisional

Probab=99.92  E-value=2.5e-23  Score=187.58  Aligned_cols=191  Identities=21%  Similarity=0.358  Sum_probs=158.2

Q ss_pred             CHHHHHHHHHHHHHHcCCCCCH-HHHHhhcCCCHHHHHHHHHHHhCC-CCCHHHHHHHHHHHHHhhh-cCCCCCchHHHH
Q 017995            2 TDGMFSEVLKTFLVKYGKEWDG-REKHKIVGKTPLEEAAIIVEDYGL-PCAKHEFVNEVYSMFSDHL-CKVKALPGANRL   78 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~pgv~~~   78 (362)
                      |+..+..+++++++++|.+.+. +.+...+|.......+.+....+. ....+++...+.+.+.+.. ....++||+.++
T Consensus        21 ~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  100 (222)
T PRK10826         21 SEPLWDRAELDVMASLGVDISRREELPDTLGLRIDQVVDLWYARQPWNGPSRQEVVQRIIARVISLIEETRPLLPGVREA  100 (222)
T ss_pred             CHHHHHHHHHHHHHHCCCCCCHHHHHHHhhCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHhcCCCCCCCHHHH
Confidence            4678999999999999998765 567788888887777666555443 2234455555555554433 468999999999


Q ss_pred             HHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHH
Q 017995           79 IKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVV  158 (362)
Q Consensus        79 L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~  158 (362)
                      |+.|+++|++++|+||+....++..+ +.+++.++|+.+++++++..+||+|+.|..+++++|++|++|+||||+.+|++
T Consensus       101 l~~l~~~g~~~~i~S~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~igDs~~Di~  179 (222)
T PRK10826        101 LALCKAQGLKIGLASASPLHMLEAVL-TMFDLRDYFDALASAEKLPYSKPHPEVYLNCAAKLGVDPLTCVALEDSFNGMI  179 (222)
T ss_pred             HHHHHHCCCeEEEEeCCcHHHHHHHH-HhCcchhcccEEEEcccCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCChhhHH
Confidence            99999999999999999999999888 88999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCEEEEEcCCCCcc-ccccchhHhhcccccc
Q 017995          159 AGKAAGMEVVAVPSLPKQT-HRYTAADEVINSLLDL  193 (362)
Q Consensus       159 aA~~aG~~~i~v~~~~~~~-~~~ssa~~vi~~l~el  193 (362)
                      +|+++|++++++....... .....++.++.++.++
T Consensus       180 aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~dl  215 (222)
T PRK10826        180 AAKAARMRSIVVPAPEQQNDPRWALADVKLESLTEL  215 (222)
T ss_pred             HHHHcCCEEEEecCCccCchhhhhhhheeccCHHHH
Confidence            9999999999998754322 2233567888888875

>TIGR03351 PhnX-like phosphonatase-like hydrolase

Probab=99.91  E-value=1.6e-23  Score=188.47  Aligned_cols=191  Identities=23%  Similarity=0.349  Sum_probs=158.3

Q ss_pred             CHHHHHHHHHHHHHHcCCCCCHHHHHh-hcCCCHHHHHHHHHHHhCCCCC-HHHHHHHHHHHHHhhhc--CCCCCchHHH
Q 017995            2 TDGMFSEVLKTFLVKYGKEWDGREKHK-IVGKTPLEEAAIIVEDYGLPCA-KHEFVNEVYSMFSDHLC--KVKALPGANR   77 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~pgv~~   77 (362)
                      |.+.+.++|+++++++|.+.+.++..+ ++|.+..+.++.+....+.+.. .+++...+.+.+...+.  ..+++||+.+
T Consensus        15 s~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~   94 (220)
T TIGR03351        15 EDGLVYRALRQAVTAAGLSPTPEEVQSAWMGQSKIEAIRALLALDGADEAEAQAAFADFEERLAEAYDDGPPVALPGAEE   94 (220)
T ss_pred             cCchHHHHHHHHHHHcCCCCCHHHHHHhhcCCCHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhcccCCccCCCHHH
Confidence            567899999999999999888777766 8899999999888877665421 24455566666655542  5789999999


Q ss_pred             HHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCc--CCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCC-CCcEEEEecCH
Q 017995           78 LIKHLSCHGVPMALASNSHRATIESKISYQHGWN--ESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME-PSSSLVIEDSV  154 (362)
Q Consensus        78 ~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~--~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~-p~~~l~igDs~  154 (362)
                      +|+.|+++|++++|+||+....++..| +++++.  ++|+.++++++...+||+|++|..+++++++. |++|+||||+.
T Consensus        95 ~L~~L~~~g~~~~ivT~~~~~~~~~~l-~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~~igD~~  173 (220)
T TIGR03351        95 AFRSLRSSGIKVALTTGFDRDTAERLL-EKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQSVAVAGDTP  173 (220)
T ss_pred             HHHHHHHCCCEEEEEeCCchHHHHHHH-HHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCChhHeEEeCCCH
Confidence            999999999999999999999999999 888998  99999999999999999999999999999997 79999999999


Q ss_pred             hhHHHHHHcCCEE-EEEcCCCCcccc--ccchhHhhcccccc
Q 017995          155 IGVVAGKAAGMEV-VAVPSLPKQTHR--YTAADEVINSLLDL  193 (362)
Q Consensus       155 ~d~~aA~~aG~~~-i~v~~~~~~~~~--~ssa~~vi~~l~el  193 (362)
                      +|+++|+++|+.+ +++.++......  ...++.++.++.++
T Consensus       174 ~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~~~~~l  215 (220)
T TIGR03351       174 NDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLDSVADL  215 (220)
T ss_pred             HHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeecCHHHH
Confidence            9999999999999 888775432221  23456666666653

This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the

>COG0546 Gph Predicted phosphatases [General function prediction only]

Probab=99.91  E-value=3.5e-23  Score=186.46  Aligned_cols=190  Identities=25%  Similarity=0.385  Sum_probs=160.3

Q ss_pred             CHHHHHHHHHHHHHHcCCC-CCHHHHHhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhc---CCCCCchHHH
Q 017995            2 TDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLC---KVKALPGANR   77 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~pgv~~   77 (362)
                      |...+..+++.+++++|.+ .+.+.+..+.|.+..+.+..+.......... +..+.+++.|...+.   ...++||+.+
T Consensus        18 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~gv~e   96 (220)
T COG0546          18 SAEDILRAFNAALAELGLPPLDEEEIRQLIGLGLDELIERLLGEADEEAAA-ELVERLREEFLTAYAELLESRLFPGVKE   96 (220)
T ss_pred             ChHHHHHHHHHHHHHcCCCCCCHHHHHHHhcCCHHHHHHHHhccccchhHH-HHHHHHHHHHHHHHHhhccCccCCCHHH
Confidence            5677889999999999998 7889999999999999888776544433221 455555555555543   2589999999


Q ss_pred             HHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhH
Q 017995           78 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV  157 (362)
Q Consensus        78 ~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~  157 (362)
                      +|..|+++|++++|+||+++..++..| +++|+.++|+.++++++....||+|..+..++++++++|++++||||+.+|+
T Consensus        97 ~L~~L~~~g~~l~i~T~k~~~~~~~~l-~~~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l~VGDs~~Di  175 (220)
T COG0546          97 LLAALKSAGYKLGIVTNKPERELDILL-KALGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEALMVGDSLNDI  175 (220)
T ss_pred             HHHHHHhCCCeEEEEeCCcHHHHHHHH-HHhCCccccceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheEEECCCHHHH
Confidence            999999999999999999999999999 8899999999999999999999999999999999999988999999999999


Q ss_pred             HHHHHcCCEEEEEcCCCCccc--cccchhHhhcccccc
Q 017995          158 VAGKAAGMEVVAVPSLPKQTH--RYTAADEVINSLLDL  193 (362)
Q Consensus       158 ~aA~~aG~~~i~v~~~~~~~~--~~ssa~~vi~~l~el  193 (362)
                      ++|+++|+.+++|.++....+  ....++.++.++.++
T Consensus       176 ~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~el  213 (220)
T COG0546         176 LAAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAEL  213 (220)
T ss_pred             HHHHHcCCCEEEEECCCCCCcchhhcCCCEEECCHHHH
Confidence            999999999999999753222  234568888888775

>PRK13226 phosphoglycolate phosphatase; Provisional

Probab=99.91  E-value=4.9e-23  Score=186.61  Aligned_cols=190  Identities=19%  Similarity=0.314  Sum_probs=154.7

Q ss_pred             CHHHHHHHHHHHHHHcCCC-CCHHHHHhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhh-cCCCCCchHHHHH
Q 017995            2 TDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHL-CKVKALPGANRLI   79 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~pgv~~~L   79 (362)
                      |...+..+|+.+++++|.+ .+.+.+...+|.+....++.+..... ....+++.+.+.+.|.... ...+++||+.++|
T Consensus        26 s~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~L  104 (229)
T PRK13226         26 SAPDMLATVNAMLAARGRAPITLAQLRPVVSKGARAMLAVAFPELD-AAARDALIPEFLQRYEALIGTQSQLFDGVEGML  104 (229)
T ss_pred             CHHHHHHHHHHHHHHCCCCCCCHHHHHHHhhhHHHHHHHHHhccCC-hHHHHHHHHHHHHHHHHhhhhcCeeCCCHHHHH
Confidence            6788999999999999986 57777888888887776655443221 1123455666666666544 4578999999999


Q ss_pred             HHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHH
Q 017995           80 KHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA  159 (362)
Q Consensus        80 ~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~a  159 (362)
                      +.|+++|++++|+||++...+...+ +++++.++|+.+++++++..+||+|++|..+++++|++|++|+||||+.+|+++
T Consensus       105 ~~L~~~g~~l~i~Tn~~~~~~~~~l-~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~l~IGDs~~Di~a  183 (229)
T PRK13226        105 QRLECAGCVWGIVTNKPEYLARLIL-PQLGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTDCVYVGDDERDILA  183 (229)
T ss_pred             HHHHHCCCeEEEECCCCHHHHHHHH-HHcCchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCChhhEEEeCCCHHHHHH
Confidence            9999999999999999999888888 889999999999999999899999999999999999999999999999999999


Q ss_pred             HHHcCCEEEEEcCCCCccc--c-ccchhHhhcccccc
Q 017995          160 GKAAGMEVVAVPSLPKQTH--R-YTAADEVINSLLDL  193 (362)
Q Consensus       160 A~~aG~~~i~v~~~~~~~~--~-~ssa~~vi~~l~el  193 (362)
                      |+++|+.+++|.++.....  . ...++.+++++.++
T Consensus       184 A~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~~~el  220 (229)
T PRK13226        184 ARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQPQLL  220 (229)
T ss_pred             HHHCCCcEEEEeecCCCCCcChhhcCCCeeeCCHHHH
Confidence            9999999999988653221  1 12357777777664

>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase

Probab=99.90  E-value=8.8e-23  Score=187.67  Aligned_cols=169  Identities=16%  Similarity=0.218  Sum_probs=140.0

Q ss_pred             HHHHHHHHHHHcCCCCCHHHHHhhcCCCHHHHHHH----------HHHHhCCCCCHH---HHHHHHHHHHHhhh-cCCCC
Q 017995            6 FSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAI----------IVEDYGLPCAKH---EFVNEVYSMFSDHL-CKVKA   71 (362)
Q Consensus         6 ~~~a~~~~l~~~g~~~~~~~~~~~~g~~~~~~~~~----------~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~   71 (362)
                      +..+|+++++++|.+++.+++...+|.+....++.          +...++.+.+.+   ++...+...+.... ...++
T Consensus        21 ~~~a~~~~~~~~g~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  100 (253)
T TIGR01422        21 PTQAFVEAFAEFGVQITLEEARGPMGLGKWDHIRALLKMPAVAERWRAKFGRLPTEADIEAIYEAFEPLQLAKLAEYSSP  100 (253)
T ss_pred             HHHHHHHHHHHcCCCccHHHHHHhcCccHHHHHHHHhcCHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence            57899999999999888888888888876655443          234445443332   33344444443333 46899


Q ss_pred             CchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCC-cEEEeCCCCCCCCCCHHHHHHHHHHcCCC-CCcEEE
Q 017995           72 LPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF-SVIVGSDEVRTGKPSPDIFLEAAKRLNME-PSSSLV  149 (362)
Q Consensus        72 ~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f-~~iv~~~d~~~gKp~p~~~~~~~~~~~~~-p~~~l~  149 (362)
                      +||+.++|+.|+++|++++|+||++...++..+ +++|+.++| +.|++++++..+||+|++|..+++++++. |++|+|
T Consensus       101 ~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l-~~~gl~~~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~l~  179 (253)
T TIGR01422       101 IPGVIEVIAYLRARGIKIGSTTGYTREMMDVVA-PEAALQGYRPDYNVTTDDVPAGRPAPWMALKNAIELGVYDVAACVK  179 (253)
T ss_pred             CCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHH-HHHHhcCCCCceEEccccCCCCCCCHHHHHHHHHHcCCCCchheEE
Confidence            999999999999999999999999999999888 888999986 89999999999999999999999999995 999999


Q ss_pred             EecCHhhHHHHHHcCCEEEEEcCCCC
Q 017995          150 IEDSVIGVVAGKAAGMEVVAVPSLPK  175 (362)
Q Consensus       150 igDs~~d~~aA~~aG~~~i~v~~~~~  175 (362)
                      |||+.+|+++|+++|+.+|+|.++..
T Consensus       180 IGDs~~Di~aA~~aGi~~i~v~~g~~  205 (253)
T TIGR01422       180 VGDTVPDIEEGRNAGMWTVGLILSSN  205 (253)
T ss_pred             ECCcHHHHHHHHHCCCeEEEEecCCc
Confidence            99999999999999999999988653

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.

>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional

Probab=99.90  E-value=1.9e-22  Score=176.85  Aligned_cols=168  Identities=27%  Similarity=0.425  Sum_probs=147.4

Q ss_pred             CHHHHHHHHHHHHHHcCCCCCHHHHHhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhh-cCCCCCchHHHHHH
Q 017995            2 TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHL-CKVKALPGANRLIK   80 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~pgv~~~L~   80 (362)
                      |+..+.++|+++++++|.+++.+......|.+..+.+..+...++.+.+.+++...+...+.... ....++|| .++|.
T Consensus        19 s~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~e~L~   97 (188)
T PRK10725         19 TEPTHRKAWREVLGRYGLQFDEQAMVALNGSPTWRIAQAIIELNQADLDPHALAREKTEAVKSMLLDSVEPLPL-IEVVK   97 (188)
T ss_pred             CHHHHHHHHHHHHHHcCCCCCHHHHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhccCCCccH-HHHHH
Confidence            67889999999999999988877888899999988888888877766666666555555554443 56788897 58999


Q ss_pred             HHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHH
Q 017995           81 HLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAG  160 (362)
Q Consensus        81 ~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA  160 (362)
                      .|++. ++++|+||++...++..| +++|+.++|+.|++++++..+||+|++|..++++++++|++||||||+..|+++|
T Consensus        98 ~L~~~-~~l~I~T~~~~~~~~~~l-~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~igDs~~di~aA  175 (188)
T PRK10725         98 AWHGR-RPMAVGTGSESAIAEALL-AHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCVVFEDADFGIQAA  175 (188)
T ss_pred             HHHhC-CCEEEEcCCchHHHHHHH-HhCCcHhHceEEEehhhccCCCCChHHHHHHHHHcCCCHHHeEEEeccHhhHHHH
Confidence            99876 899999999999999999 8999999999999999999999999999999999999999999999999999999


Q ss_pred             HHcCCEEEEEcC
Q 017995          161 KAAGMEVVAVPS  172 (362)
Q Consensus       161 ~~aG~~~i~v~~  172 (362)
                      +++|+++|+|..
T Consensus       176 ~~aG~~~i~~~~  187 (188)
T PRK10725        176 RAAGMDAVDVRL  187 (188)
T ss_pred             HHCCCEEEeecC
Confidence            999999999853

>PRK13288 pyrophosphatase PpaX; Provisional

Probab=99.90  E-value=7.2e-23  Score=183.48  Aligned_cols=186  Identities=21%  Similarity=0.310  Sum_probs=152.7

Q ss_pred             CHHHHHHHHHHHHHHcCCC-CCHHHHHhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhh-cCCCCCchHHHHH
Q 017995            2 TDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHL-CKVKALPGANRLI   79 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~pgv~~~L   79 (362)
                      |+..+.++|++++++++.+ ++.+.+...+|.+..+.+..+.     +...+++...+...+.... ...+++||+.++|
T Consensus        17 s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l   91 (214)
T PRK13288         17 TNELIISSFLHTLKTYYPNQYKREDVLPFIGPSLHDTFSKID-----ESKVEEMITTYREFNHEHHDELVTEYETVYETL   91 (214)
T ss_pred             CHHHHHHHHHHHHHHhCCCCCCHHHHHHHhCcCHHHHHHhcC-----HHHHHHHHHHHHHHHHHhhhhhcccCcCHHHHH
Confidence            5778999999999999864 6778888899998877765432     1233455555555554433 4678999999999


Q ss_pred             HHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHH
Q 017995           80 KHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA  159 (362)
Q Consensus        80 ~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~a  159 (362)
                      +.|+++|++++|+||+....++..+ +.+|+.++|+.+++++++..+||+|+.|..++++++++|++|+||||+.+|+++
T Consensus        92 ~~L~~~g~~~~i~S~~~~~~~~~~l-~~~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~iGDs~~Di~a  170 (214)
T PRK13288         92 KTLKKQGYKLGIVTTKMRDTVEMGL-KLTGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEALMVGDNHHDILA  170 (214)
T ss_pred             HHHHHCCCeEEEEeCCCHHHHHHHH-HHcCChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHHEEEECCCHHHHHH
Confidence            9999999999999999999999889 899999999999999999999999999999999999999999999999999999


Q ss_pred             HHHcCCEEEEEcCCCCcccc--ccchhHhhcccccc
Q 017995          160 GKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDL  193 (362)
Q Consensus       160 A~~aG~~~i~v~~~~~~~~~--~ssa~~vi~~l~el  193 (362)
                      |+++|+.+++|.++......  ...++.+++++.++
T Consensus       171 a~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~~~~~l  206 (214)
T PRK13288        171 GKNAGTKTAGVAWTIKGREYLEQYKPDFMLDKMSDL  206 (214)
T ss_pred             HHHCCCeEEEEcCCCCCHHHHhhcCcCEEECCHHHH
Confidence            99999999999886432221  12355666666653

>PRK10563 6-phosphogluconate phosphatase; Provisional

Probab=99.90  E-value=1.5e-22  Score=182.21  Aligned_cols=188  Identities=22%  Similarity=0.348  Sum_probs=154.8

Q ss_pred             CHHHHHHHHHHHHHHcCCCCCHHH-HHhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhh-cCCCCCchHHHHH
Q 017995            2 TDGMFSEVLKTFLVKYGKEWDGRE-KHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHL-CKVKALPGANRLI   79 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~pgv~~~L   79 (362)
                      |+.++.++|+++++++|++++.++ ...+.|.+..+.++.+.+.++.+.+.+++...+...+.... ...+++||+.++|
T Consensus        18 ~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~L   97 (221)
T PRK10563         18 SEVICSRAYVTMFAEFGITLSLEEVFKRFKGVKLYEIIDIISKEHGVTLAKAELEPVYRAEVARLFDSELEPIAGANALL   97 (221)
T ss_pred             ChHHHHHHHHHHHHHcCCCCCHHHHHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHccCCcCCCHHHHH
Confidence            467788999999999999887654 46778889999999999888887666777666666554443 4689999999999


Q ss_pred             HHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCc-EEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHH
Q 017995           80 KHLSCHGVPMALASNSHRATIESKISYQHGWNESFS-VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVV  158 (362)
Q Consensus        80 ~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~-~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~  158 (362)
                      +.|   +++++|+||++...++..| +++++.++|+ .++++++++..||+|++|..++++++++|++|+||||+..|++
T Consensus        98 ~~L---~~~~~ivTn~~~~~~~~~l-~~~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l~igDs~~di~  173 (221)
T PRK10563         98 ESI---TVPMCVVSNGPVSKMQHSL-GKTGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVENCILVDDSSAGAQ  173 (221)
T ss_pred             HHc---CCCEEEEeCCcHHHHHHHH-HhcChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHHeEEEeCcHhhHH
Confidence            999   3899999999999999888 8899999996 6888888999999999999999999999999999999999999


Q ss_pred             HHHHcCCEEEEEcCCCCccccccchhHhhcccccc
Q 017995          159 AGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL  193 (362)
Q Consensus       159 aA~~aG~~~i~v~~~~~~~~~~ssa~~vi~~l~el  193 (362)
                      +|+++|++++++............++.++.++.++
T Consensus       174 aA~~aG~~~i~~~~~~~~~~~~~~~~~~~~~~~~l  208 (221)
T PRK10563        174 SGIAAGMEVFYFCADPHNKPIDHPLVTTFTDLAQL  208 (221)
T ss_pred             HHHHCCCEEEEECCCCCCcchhhhhhHHHHHHHHH
Confidence            99999999998865322221112334566777664

>TIGR01990 bPGM beta-phosphoglucomutase

Probab=99.90  E-value=2.5e-22  Score=175.48  Aligned_cols=167  Identities=29%  Similarity=0.414  Sum_probs=142.9

Q ss_pred             CHHHHHHHHHHHHHHcCCCCCHHHHHhhcCCCHHHHHHHHHHHhCCCCCHHH---HHHHHHHHHHhhh---cCCCCCchH
Q 017995            2 TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHE---FVNEVYSMFSDHL---CKVKALPGA   75 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~---~~~~~~pgv   75 (362)
                      |++.+.++|+++++.+|++++.+....+.|.+..+.++.+....+.+.+.+.   +...+.+.|....   ....++||+
T Consensus        13 s~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~   92 (185)
T TIGR01990        13 TAEYHYLAWKALADELGIPFDEEFNESLKGVSREDSLERILDLGGKKYSEEEKEELAERKNDYYVELLKELTPADVLPGI   92 (185)
T ss_pred             ChHHHHHHHHHHHHHcCCCCCHHHHHHhcCCChHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHhcCCcccCccH
Confidence            5788999999999999999888877888999999999988888777655433   3344444444433   235899999


Q ss_pred             HHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHh
Q 017995           76 NRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVI  155 (362)
Q Consensus        76 ~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~  155 (362)
                      .++|+.|+++|++++|+||+..  ....+ +++++.++|+.+++++++..+||+|+.|..++++++++|++|+||||+..
T Consensus        93 ~~~L~~L~~~g~~~~i~s~~~~--~~~~l-~~~~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~v~vgD~~~  169 (185)
T TIGR01990        93 KNLLDDLKKNNIKIALASASKN--APTVL-EKLGLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSPSECIGIEDAQA  169 (185)
T ss_pred             HHHHHHHHHCCCeEEEEeCCcc--HHHHH-HhcCcHhhCcEEEehhhcCCCCCChHHHHHHHHHcCCCHHHeEEEecCHH
Confidence            9999999999999999998754  34567 88999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHcCCEEEEEc
Q 017995          156 GVVAGKAAGMEVVAVP  171 (362)
Q Consensus       156 d~~aA~~aG~~~i~v~  171 (362)
                      |+++|+++|+++|+|.
T Consensus       170 di~aA~~aG~~~i~v~  185 (185)
T TIGR01990       170 GIEAIKAAGMFAVGVG  185 (185)
T ss_pred             HHHHHHHcCCEEEecC
Confidence            9999999999999873

The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.

>PRK11587 putative phosphatase; Provisional

Probab=99.89  E-value=4e-22  Score=179.28  Aligned_cols=186  Identities=26%  Similarity=0.381  Sum_probs=144.8

Q ss_pred             CHHHHHHHHHHHHHHcCCCCCHHHHHhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHH--HHh-hhcCCCCCchHHHH
Q 017995            2 TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSM--FSD-HLCKVKALPGANRL   78 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~pgv~~~   78 (362)
                      |++.+.++|+++++++|++. .+....+.|.+..+.++.+...    .+.+++.+.+...  +.. .....+++||+.++
T Consensus        17 s~~~~~~a~~~~~~~~g~~~-~~~~~~~~g~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~   91 (218)
T PRK11587         17 SLPAVERAWSNWADRHGIAP-DEVLNFIHGKQAITSLRHFMAG----ASEAEIQAEFTRLEQIEATDTEGITALPGAIAL   91 (218)
T ss_pred             CHHHHHHHHHHHHHHcCCCH-HHHHHHHcCCCHHHHHHHHhcc----CCcHHHHHHHHHHHHHHHhhhcCceeCcCHHHH
Confidence            57889999999999999864 3344556688888777665432    1233443433321  222 23568899999999


Q ss_pred             HHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHH
Q 017995           79 IKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVV  158 (362)
Q Consensus        79 L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~  158 (362)
                      |+.|+++|++++|+||++...+...+ +..++ .+|+.+++++++...||+|+.|..+++++|+.|++|+||||+..|++
T Consensus        92 L~~L~~~g~~~~ivTn~~~~~~~~~l-~~~~l-~~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~~~l~igDs~~di~  169 (218)
T PRK11587         92 LNHLNKLGIPWAIVTSGSVPVASARH-KAAGL-PAPEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQECVVVEDAPAGVL  169 (218)
T ss_pred             HHHHHHcCCcEEEEcCCCchHHHHHH-HhcCC-CCccEEEEHHHhcCCCCCcHHHHHHHHHcCCCcccEEEEecchhhhH
Confidence            99999999999999999988777677 77787 46788999999988999999999999999999999999999999999


Q ss_pred             HHHHcCCEEEEEcCCCCccccccchhHhhcccccccc
Q 017995          159 AGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRP  195 (362)
Q Consensus       159 aA~~aG~~~i~v~~~~~~~~~~ssa~~vi~~l~el~~  195 (362)
                      +|+++|+.++++.+.... .....++.+++++.++..
T Consensus       170 aA~~aG~~~i~v~~~~~~-~~~~~~~~~~~~~~el~~  205 (218)
T PRK11587        170 SGLAAGCHVIAVNAPADT-PRLDEVDLVLHSLEQLTV  205 (218)
T ss_pred             HHHHCCCEEEEECCCCch-hhhccCCEEecchhheeE
Confidence            999999999999775322 222345677777777543

>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]

Probab=99.89  E-value=8.3e-22  Score=174.94  Aligned_cols=170  Identities=41%  Similarity=0.637  Sum_probs=159.3

Q ss_pred             CHHHHHHHHHHHHHHcCCCCCHHHHHhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhcCCCCCchHHHHHHH
Q 017995            2 TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKH   81 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~~~L~~   81 (362)
                      |+.++.++|++.++++|.+.+.+.....+|....+..+.+...+..+.+.+++..+..+..........++||+.++++.
T Consensus        24 te~~y~~~~~~~~~~ygk~~~~~~~~~~mG~~~~eaa~~~~~~~~dp~s~ee~~~e~~~~~~~~~~~~~~~PGa~kLv~~  103 (222)
T KOG2914|consen   24 TEDLYTEAWQELLDRYGKPYPWDVKVKSMGKRTSEAARLFVKKLPDPVSREEFNKEEEEILDRLFMNSILMPGAEKLVNH  103 (222)
T ss_pred             cHHHHHHHHHHHHHHcCCCChHHHHHHHcCCCHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhccccccCCcHHHHHHH
Confidence            78999999999999999988888889999999999999999888899999999999999998888999999999999999


Q ss_pred             HHHCCCcEEEEcCCChHhHHHHHHhhcC-CcCCCcEEEe--CCCCCCCCCCHHHHHHHHHHcCCCC-CcEEEEecCHhhH
Q 017995           82 LSCHGVPMALASNSHRATIESKISYQHG-WNESFSVIVG--SDEVRTGKPSPDIFLEAAKRLNMEP-SSSLVIEDSVIGV  157 (362)
Q Consensus        82 L~~~g~~~~i~S~~~~~~i~~~L~~~~g-l~~~f~~iv~--~~d~~~gKp~p~~~~~~~~~~~~~p-~~~l~igDs~~d~  157 (362)
                      |+.+|++++++|++++..++..+ .+++ +...|++++.  +.++..|||+|++|+.+++++|..| +.||+++|++.++
T Consensus       104 L~~~gip~alat~s~~~~~~~k~-~~~~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~~~~~~k~lVfeds~~Gv  182 (222)
T KOG2914|consen  104 LKNNGIPVALATSSTSASFELKI-SRHEDIFKNFSHVVLGDDPEVKNGKPDPDIYLKAAKRLGVPPPSKCLVFEDSPVGV  182 (222)
T ss_pred             HHhCCCCeeEEecCCcccHHHHH-HHhhHHHHhcCCCeecCCccccCCCCCchHHHHHHHhcCCCCccceEEECCCHHHH
Confidence            99999999999999999999888 5554 8888999888  7788899999999999999999999 9999999999999


Q ss_pred             HHHHHcCCEEEEEcC
Q 017995          158 VAGKAAGMEVVAVPS  172 (362)
Q Consensus       158 ~aA~~aG~~~i~v~~  172 (362)
                      ++|+++||.||+++.
T Consensus       183 ~aa~aagm~vi~v~~  197 (222)
T KOG2914|consen  183 QAAKAAGMQVVGVAT  197 (222)
T ss_pred             HHHHhcCCeEEEecC
Confidence            999999999999988

>PRK13478 phosphonoacetaldehyde hydrolase; Provisional

Probab=99.89  E-value=1.1e-21  Score=181.88  Aligned_cols=169  Identities=18%  Similarity=0.238  Sum_probs=138.7

Q ss_pred             HHHHHHHHHHHcCCCCCHHHHHhhcCCCHHHHHHHH----------HHHhCCCCCHH---HHHHHHHHHHHhhh-cCCCC
Q 017995            6 FSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAII----------VEDYGLPCAKH---EFVNEVYSMFSDHL-CKVKA   71 (362)
Q Consensus         6 ~~~a~~~~l~~~g~~~~~~~~~~~~g~~~~~~~~~~----------~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~   71 (362)
                      +..+|+++++++|++++.++....+|.+....++.+          ...++.+.+.+   ++...+...+.... ....+
T Consensus        23 ~~~a~~~~~~~~g~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (267)
T PRK13478         23 PTQAFVEAFAQFGVEITLEEARGPMGLGKWDHIRALLKMPRVAARWQAVFGRLPTEADVDALYAAFEPLQIAKLADYATP  102 (267)
T ss_pred             HHHHHHHHHHHcCCCCCHHHHHHhcCCCHHHHHHHHHhcHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence            468999999999998888888888888866655443          23345443332   33344444444333 46889


Q ss_pred             CchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCC-cEEEeCCCCCCCCCCHHHHHHHHHHcCCC-CCcEEE
Q 017995           72 LPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF-SVIVGSDEVRTGKPSPDIFLEAAKRLNME-PSSSLV  149 (362)
Q Consensus        72 ~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f-~~iv~~~d~~~gKp~p~~~~~~~~~~~~~-p~~~l~  149 (362)
                      +||+.++|+.|+++|++++|+||++...++..+ +.+++.++| +.|++++++..+||+|++|..+++++++. |++|+|
T Consensus       103 ~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l-~~~~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~~e~l~  181 (267)
T PRK13478        103 IPGVLEVIAALRARGIKIGSTTGYTREMMDVVV-PLAAAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGVYDVAACVK  181 (267)
T ss_pred             CCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHH-HHHhhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCCCCCcceEE
Confidence            999999999999999999999999999998888 778888874 89999999999999999999999999996 699999


Q ss_pred             EecCHhhHHHHHHcCCEEEEEcCCCC
Q 017995          150 IEDSVIGVVAGKAAGMEVVAVPSLPK  175 (362)
Q Consensus       150 igDs~~d~~aA~~aG~~~i~v~~~~~  175 (362)
                      |||+.+|+++|+++|+.+|+|.++..
T Consensus       182 IGDs~~Di~aA~~aG~~~i~v~~g~~  207 (267)
T PRK13478        182 VDDTVPGIEEGLNAGMWTVGVILSGN  207 (267)
T ss_pred             EcCcHHHHHHHHHCCCEEEEEccCcc
Confidence            99999999999999999999988643

>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase

Probab=99.88  E-value=2e-21  Score=169.72  Aligned_cols=166  Identities=30%  Similarity=0.471  Sum_probs=142.0

Q ss_pred             CHHHHHHHHHHHHHHcCCCCCHHHHHhhcCCCHHHHHHHHHHHhCCCCCHH---HHHHHHHHHHHhhh--cCCCCCchHH
Q 017995            2 TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKH---EFVNEVYSMFSDHL--CKVKALPGAN   76 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~--~~~~~~pgv~   76 (362)
                      |+..+..+++++++++|++++.+....+.|.+..+.+..+...++...+.+   .+...+.+.+....  ....++||+.
T Consensus        15 s~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   94 (185)
T TIGR02009        15 TAPLHAQAWKHLADKYGIEFDKQYNTSLGGLSREDILRAILKLRKPGLSLETIHQLAERKNELYRELLRLTGAEVLPGIE   94 (185)
T ss_pred             ChHHHHHHHHHHHHHcCCCCCHHHHHHcCCCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhccCCCCCcCHH
Confidence            567889999999999999887666677889999999888888775444433   34444555555544  3589999999


Q ss_pred             HHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhh
Q 017995           77 RLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG  156 (362)
Q Consensus        77 ~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d  156 (362)
                      ++|+.|+++|++++++|++  ..++..+ +++|+.++|+.++++++...+||+|++|..++++++++|++|+||||+..|
T Consensus        95 ~~l~~l~~~g~~i~i~S~~--~~~~~~l-~~~~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~IgD~~~d  171 (185)
T TIGR02009        95 NFLKRLKKKGIAVGLGSSS--KNADRIL-AKLGLTDYFDAIVDADEVKEGKPHPETFLLAAELLGVSPNECVVFEDALAG  171 (185)
T ss_pred             HHHHHHHHcCCeEEEEeCc--hhHHHHH-HHcChHHHCCEeeehhhCCCCCCChHHHHHHHHHcCCCHHHeEEEeCcHhh
Confidence            9999999999999999998  5567778 889999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCEEEEE
Q 017995          157 VVAGKAAGMEVVAV  170 (362)
Q Consensus       157 ~~aA~~aG~~~i~v  170 (362)
                      +++|+++|+++++|
T Consensus       172 i~aA~~~G~~~i~v  185 (185)
T TIGR02009       172 VQAARAAGMFAVAV  185 (185)
T ss_pred             HHHHHHCCCeEeeC
Confidence            99999999999875

All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).

>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein

Probab=99.88  E-value=2.1e-21  Score=172.78  Aligned_cols=184  Identities=24%  Similarity=0.322  Sum_probs=146.1

Q ss_pred             CHHHHHHHHHHHHHH-cCCC-CCHHHHHhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhcCCCCCchHHHHH
Q 017995            2 TDGMFSEVLKTFLVK-YGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLI   79 (362)
Q Consensus         2 Se~~~~~a~~~~l~~-~g~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~~~L   79 (362)
                      |...+.+++++++++ +|.+ .+.+.+.+++|.+..+.++.    .+.+.....  ......+ ......+++||+.++|
T Consensus        12 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~~--~~~~~~~-~~~~~~~~~~g~~~~L   84 (205)
T TIGR01454        12 SFAVMREAFAIAYREVVGDGPAPFEEYRRHLGRYFPDIMRI----MGLPLEMEE--PFVRESY-RLAGEVEVFPGVPELL   84 (205)
T ss_pred             CHHHHHHHHHHHHHHhcCCCCCCHHHHHHHhCccHHHHHHH----cCCCHHHHH--HHHHHHH-HhhcccccCCCHHHHH
Confidence            678899999999998 4764 56777888889877766543    344321111  1112222 2235689999999999


Q ss_pred             HHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHH
Q 017995           80 KHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA  159 (362)
Q Consensus        80 ~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~a  159 (362)
                      +.|+++|++++|+||+....++..+ +++|+.++|+.+++++++..+||+|+.|..++++++++|++|+||||+..|+.+
T Consensus        85 ~~L~~~g~~~~i~Sn~~~~~~~~~l-~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~l~igD~~~Di~a  163 (205)
T TIGR01454        85 AELRADGVGTAIATGKSGPRARSLL-EALGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDAVMVGDAVTDLAS  163 (205)
T ss_pred             HHHHHCCCeEEEEeCCchHHHHHHH-HHcCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCChhheEEEcCCHHHHHH
Confidence            9999999999999999999999888 899999999999999999999999999999999999999999999999999999


Q ss_pred             HHHcCCEEEEEcCCCCcccc--ccchhHhhcccccc
Q 017995          160 GKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDL  193 (362)
Q Consensus       160 A~~aG~~~i~v~~~~~~~~~--~ssa~~vi~~l~el  193 (362)
                      |+++|++++++.++......  ...++.++.++.++
T Consensus       164 A~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~~~~l  199 (205)
T TIGR01454       164 ARAAGTATVAALWGEGDAGELLAARPDFLLRKPQSL  199 (205)
T ss_pred             HHHcCCeEEEEEecCCChhhhhhcCCCeeeCCHHHH
Confidence            99999999999886543322  12345666666553

The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.

>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253

Probab=99.88  E-value=1.3e-21  Score=175.92  Aligned_cols=189  Identities=20%  Similarity=0.287  Sum_probs=133.6

Q ss_pred             HHHHHHHHHHH---HHHcCCCCCHHHHHhhc-------CCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhcCCCCC
Q 017995            3 DGMFSEVLKTF---LVKYGKEWDGREKHKIV-------GKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKAL   72 (362)
Q Consensus         3 e~~~~~a~~~~---l~~~g~~~~~~~~~~~~-------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (362)
                      +..+..+++.+   +..+|++++.+++...+       +.........+....+.....+.+......++......++++
T Consensus        17 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (221)
T TIGR02253        17 SGLAEKARRNAIEVLIEAGLNVDFEEAYEELLKLIKEYGSNYPTHFDYLIRRLWEEYNPKLVAAFVYAYHKLKFAYLRVY   96 (221)
T ss_pred             CCccCHHHHHHHHHHHHCCCcCCHHHHHHHHHHHHHHhccccCcchHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCCC
Confidence            34455555544   56778877766553322       111111111122222222222333333333333333567999


Q ss_pred             chHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEec
Q 017995           73 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIED  152 (362)
Q Consensus        73 pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igD  152 (362)
                      ||+.++|+.|+++|++++|+||++...+...+ +++|+.++|+.|+++++++.+||+|+.|..+++++|++|++|+||||
T Consensus        97 ~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l-~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~igD  175 (221)
T TIGR02253        97 PGVRDTLMELRESGYRLGIITDGLPVKQWEKL-ERLGVRDFFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEEAVMVGD  175 (221)
T ss_pred             CCHHHHHHHHHHCCCEEEEEeCCchHHHHHHH-HhCChHHhccEEEEeccCCCCCCCHHHHHHHHHHcCCChhhEEEECC
Confidence            99999999999999999999999998888888 89999999999999999999999999999999999999999999999


Q ss_pred             CH-hhHHHHHHcCCEEEEEcCCCCcc---ccccchhHhhccccc
Q 017995          153 SV-IGVVAGKAAGMEVVAVPSLPKQT---HRYTAADEVINSLLD  192 (362)
Q Consensus       153 s~-~d~~aA~~aG~~~i~v~~~~~~~---~~~ssa~~vi~~l~e  192 (362)
                      +. +|+.+|+++|+.+|++.++....   .....++.+++++.+
T Consensus       176 s~~~di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~e  219 (221)
T TIGR02253       176 RLDKDIKGAKNLGMKTVWINQGKSSKMEDDVYPYPDYEISSLRE  219 (221)
T ss_pred             ChHHHHHHHHHCCCEEEEECCCCCcccccccccCCCeeeCcHHh
Confidence            98 89999999999999998754322   111234555555544

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).

>PRK13223 phosphoglycolate phosphatase; Provisional

Probab=99.87  E-value=6.9e-21  Score=176.84  Aligned_cols=191  Identities=23%  Similarity=0.263  Sum_probs=153.5

Q ss_pred             CHHHHHHHHHHHHHHcCCCC-CHHHHHhhcCCCHHHHHHHHHHH----hCCCC-CHHHHHHHHHHHHHhhhcCCCCCchH
Q 017995            2 TDGMFSEVLKTFLVKYGKEW-DGREKHKIVGKTPLEEAAIIVED----YGLPC-AKHEFVNEVYSMFSDHLCKVKALPGA   75 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~~-~~~~~~~~~g~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~pgv   75 (362)
                      |++.+.++++++++++|.+. +.+.+..++|.+..+.+..+...    .+.+. ..+++...+.+.|........++||+
T Consensus        27 s~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  106 (272)
T PRK13223         27 SVPDLAAAVDRMLLELGRPPAGLEAVRHWVGNGAPVLVRRALAGSIDHDGVDDELAEQALALFMEAYADSHELTVVYPGV  106 (272)
T ss_pred             CHHHHHHHHHHHHHHcCCCCCCHHHHHHHhChhHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHhcCcCCccCCCH
Confidence            57889999999999999986 45567788898877776655432    12221 12344455555555433457899999


Q ss_pred             HHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHh
Q 017995           76 NRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVI  155 (362)
Q Consensus        76 ~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~  155 (362)
                      .++|+.|+++|++++|+||++...++..+ +++++..+|+.+++++++..+||+|+.|..+++++|++|++|++|||+..
T Consensus       107 ~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l-~~~~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l~IGD~~~  185 (272)
T PRK13223        107 RDTLKWLKKQGVEMALITNKPERFVAPLL-DQMKIGRYFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQSLFVGDSRS  185 (272)
T ss_pred             HHHHHHHHHCCCeEEEEECCcHHHHHHHH-HHcCcHhhCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHEEEECCCHH
Confidence            99999999999999999999999988888 88999999999999999998999999999999999999999999999999


Q ss_pred             hHHHHHHcCCEEEEEcCCCCcccc--ccchhHhhcccccc
Q 017995          156 GVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDL  193 (362)
Q Consensus       156 d~~aA~~aG~~~i~v~~~~~~~~~--~ssa~~vi~~l~el  193 (362)
                      |+++|+++|+.+++|.++......  ...++.+++++.++
T Consensus       186 Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~~l~el  225 (272)
T PRK13223        186 DVLAAKAAGVQCVALSYGYNHGRPIAEESPALVIDDLRAL  225 (272)
T ss_pred             HHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEECCHHHH
Confidence            999999999999999875432222  22467777777775

>PRK13225 phosphoglycolate phosphatase; Provisional

Probab=99.86  E-value=1.6e-20  Score=174.03  Aligned_cols=184  Identities=17%  Similarity=0.251  Sum_probs=149.3

Q ss_pred             CHHHHHHHHHHHHHHcCCC-CCHHHHHhhcCCCHHHHHHHHHHHhCCCC-CHHHHHHHHHHHHHhhhcCCCCCchHHHHH
Q 017995            2 TDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPC-AKHEFVNEVYSMFSDHLCKVKALPGANRLI   79 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~pgv~~~L   79 (362)
                      |++.+..+++++++++|.+ ++.+.+.++.|.+..+.++.    ++.+. ..+++...+.+.+......++++||+.++|
T Consensus        76 S~~~~~~a~~~~~~~~G~~~~~~~~~~~~~g~~~~~i~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pg~~e~L  151 (273)
T PRK13225         76 SLPTVVAIANAHAPDFGYDPIDERDYAQLRQWSSRTIVRR----AGLSPWQQARLLQRVQRQLGDCLPALQLFPGVADLL  151 (273)
T ss_pred             CHHHHHHHHHHHHHHCCCCCCCHHHHHHHhCccHHHHHHH----cCCCHHHHHHHHHHHHHHHHhhcccCCcCCCHHHHH
Confidence            6788999999999999986 57777788888877665543    34331 234455666666655556789999999999


Q ss_pred             HHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHH
Q 017995           80 KHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA  159 (362)
Q Consensus        80 ~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~a  159 (362)
                      +.|+++|++++|+||+....++..+ +++|+.++|+.++++++..   +.++.+..++++++++|++|+||||+..|+++
T Consensus       152 ~~L~~~gi~laIvSn~~~~~~~~~L-~~~gl~~~F~~vi~~~~~~---~k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~a  227 (273)
T PRK13225        152 AQLRSRSLCLGILSSNSRQNIEAFL-QRQGLRSLFSVVQAGTPIL---SKRRALSQLVAREGWQPAAVMYVGDETRDVEA  227 (273)
T ss_pred             HHHHHCCCeEEEEeCCCHHHHHHHH-HHcCChhheEEEEecCCCC---CCHHHHHHHHHHhCcChhHEEEECCCHHHHHH
Confidence            9999999999999999999999999 8999999999998887653   35688999999999999999999999999999


Q ss_pred             HHHcCCEEEEEcCCCCcccc--ccchhHhhcccccc
Q 017995          160 GKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDL  193 (362)
Q Consensus       160 A~~aG~~~i~v~~~~~~~~~--~ssa~~vi~~l~el  193 (362)
                      |+++|+.+++|.++......  ...++.+++++.++
T Consensus       228 A~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~~~~eL  263 (273)
T PRK13225        228 ARQVGLIAVAVTWGFNDRQSLVAACPDWLLETPSDL  263 (273)
T ss_pred             HHHCCCeEEEEecCCCCHHHHHHCCCCEEECCHHHH
Confidence            99999999999886443321  23467788777765

>PRK13222 phosphoglycolate phosphatase; Provisional

Probab=99.86  E-value=5.8e-20  Score=165.65  Aligned_cols=191  Identities=20%  Similarity=0.286  Sum_probs=155.7

Q ss_pred             CHHHHHHHHHHHHHHcCCC-CCHHHHHhhcCCCHHHHHHHHHHHhCCCCCH---HHHHHHHHHHHHhhh-cCCCCCchHH
Q 017995            2 TDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPCAK---HEFVNEVYSMFSDHL-CKVKALPGAN   76 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~pgv~   76 (362)
                      |...+..++..+++.+|.+ ++.+.+..++|.+..+.+..+....+.....   +++...+...|.... ....++||+.
T Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   99 (226)
T PRK13222         20 SAPDLAAAVNAALAALGLPPAGEERVRTWVGNGADVLVERALTWAGREPDEELLEKLRELFDRHYAENVAGGSRLYPGVK   99 (226)
T ss_pred             CHHHHHHHHHHHHHHCCCCCCCHHHHHHHhCccHHHHHHHHHhhccCCccHHHHHHHHHHHHHHHHHhccccCccCCCHH
Confidence            4567888999999999986 4667778888988888877776654433333   334445555555444 3588999999


Q ss_pred             HHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhh
Q 017995           77 RLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG  156 (362)
Q Consensus        77 ~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d  156 (362)
                      ++|+.|+++|++++++|++....++..+ +++++..+|+.+++++++...||+|+.|..++++++++|++|++|||+.+|
T Consensus       100 ~~l~~l~~~g~~~~i~S~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~igD~~~D  178 (226)
T PRK13222        100 ETLAALKAAGYPLAVVTNKPTPFVAPLL-EALGIADYFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPEEMLFVGDSRND  178 (226)
T ss_pred             HHHHHHHHCCCeEEEEeCCCHHHHHHHH-HHcCCccCccEEEcCCCCCCCCcChHHHHHHHHHcCCChhheEEECCCHHH
Confidence            9999999999999999999999998888 889999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCEEEEEcCCCCcccc--ccchhHhhcccccc
Q 017995          157 VVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDL  193 (362)
Q Consensus       157 ~~aA~~aG~~~i~v~~~~~~~~~--~ssa~~vi~~l~el  193 (362)
                      +++|+++|+.+++|.++......  ...++++++++.++
T Consensus       179 i~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~~~~~l  217 (226)
T PRK13222        179 IQAARAAGCPSVGVTYGYNYGEPIALSEPDVVIDHFAEL  217 (226)
T ss_pred             HHHHHHCCCcEEEECcCCCCccchhhcCCCEEECCHHHH
Confidence            99999999999999876432211  22456777777764

>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A

Probab=99.85  E-value=1.5e-20  Score=161.62  Aligned_cols=162  Identities=28%  Similarity=0.478  Sum_probs=138.9

Q ss_pred             HHHHHHHHH-HHHHcCCCCCHHHHHhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhcCCCCCchHHHHHHHH
Q 017995            4 GMFSEVLKT-FLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHL   82 (362)
Q Consensus         4 ~~~~~a~~~-~l~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~~~L~~L   82 (362)
                      ..+.+++.. +++.++.+.+.+.++...+.+..+.+..+....+..  ...+.+.+.+.  ......+++||+.++|+.|
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~L~~l   89 (176)
T PF13419_consen   14 PAIFRALQRLALEEFGLEISAEELRELFGKSYEEALERLLERFGID--PEEIQELFREY--NLESKLQPYPGVRELLERL   89 (176)
T ss_dssp             HHHHHHHHHHHHHHTTHHHHHHHHHHHTTSHHHHHHHHHHHHHHHH--HHHHHHHHHHH--HHHGGEEESTTHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCCHHHHHHHhCCCHHHHHHHhhhccchh--HHHHHHHhhhh--hhhhccchhhhhhhhhhhc
Confidence            456778887 478899887777788888888888888888876543  33333333333  1125789999999999999


Q ss_pred             HHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHH
Q 017995           83 SCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKA  162 (362)
Q Consensus        83 ~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~  162 (362)
                      +++|++++++||.+...++..+ +++|+.++|+.++++++.+..||+|+.|..++++++++|++|++|||+..|+++|++
T Consensus        90 ~~~~~~~~i~Sn~~~~~~~~~l-~~~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~  168 (176)
T PF13419_consen   90 KAKGIPLVIVSNGSRERIERVL-ERLGLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEEILFVGDSPSDVEAAKE  168 (176)
T ss_dssp             HHTTSEEEEEESSEHHHHHHHH-HHTTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGGEEEEESSHHHHHHHHH
T ss_pred             ccccceeEEeecCCcccccccc-cccccccccccccccchhhhhhhHHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHH
Confidence            9999999999999999999899 889999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCEEEEE
Q 017995          163 AGMEVVAV  170 (362)
Q Consensus       163 aG~~~i~v  170 (362)
                      +|+.+|+|
T Consensus       169 ~G~~~i~v  176 (176)
T PF13419_consen  169 AGIKTIWV  176 (176)
T ss_dssp             TTSEEEEE
T ss_pred             cCCeEEeC
Confidence            99999986

...

>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254

Probab=99.85  E-value=6.6e-20  Score=164.99  Aligned_cols=186  Identities=19%  Similarity=0.219  Sum_probs=137.4

Q ss_pred             CHHHHHHHHHHHHHHcCCCCCHHHHHhhcC-------------CCHH----HHHHHHHHHhCCCCCHHHHHHHHHHHHHh
Q 017995            2 TDGMFSEVLKTFLVKYGKEWDGREKHKIVG-------------KTPL----EEAAIIVEDYGLPCAKHEFVNEVYSMFSD   64 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~~~~~~~~~~~g-------------~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   64 (362)
                      |...+.++++++++++|++.+.+....+.+             .+..    +.+..+...++.+...+.+..    .+..
T Consensus        15 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~   90 (224)
T TIGR02254        15 FQAAEALALRLLFEDQGIPLTEDMFAQYKEINQGLWRAYEEGKITKDEVVNTRFSALLKEYNTEADEALLNQ----KYLR   90 (224)
T ss_pred             cchHHHHHHHHHHHHhCCCccHHHHHHHHHHhHHHHHHHHcCCCCHHHHHHHHHHHHHHHhCCCCcHHHHHH----HHHH
Confidence            356678899999999998775443322211             1111    112334444454333222322    2332


Q ss_pred             hh-cCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHc-CC
Q 017995           65 HL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL-NM  142 (362)
Q Consensus        65 ~~-~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~-~~  142 (362)
                      .. ...+++||+.++|+.|+++ ++++++||+....++..+ +.+++..+|+.|+++++.+..||+|++|..+++++ ++
T Consensus        91 ~~~~~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l-~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~  168 (224)
T TIGR02254        91 FLEEGHQLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRL-RKSGLFPFFDDIFVSEDAGIQKPDKEIFNYALERMPKF  168 (224)
T ss_pred             HHhccCeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHH-HHCCcHhhcCEEEEcCccCCCCCCHHHHHHHHHHhcCC
Confidence            22 3578999999999999999 999999999999998888 88999999999999999999999999999999999 99


Q ss_pred             CCCcEEEEecCH-hhHHHHHHcCCEEEEEcCCCCccccccchhHhhcccccc
Q 017995          143 EPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL  193 (362)
Q Consensus       143 ~p~~~l~igDs~-~d~~aA~~aG~~~i~v~~~~~~~~~~ssa~~vi~~l~el  193 (362)
                      +|++|+||||+. .|+++|+++|+.++++.++.........++.++.++.++
T Consensus       169 ~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~el  220 (224)
T TIGR02254       169 SKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIRSLEEL  220 (224)
T ss_pred             CchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEECCHHHH
Confidence            999999999998 799999999999999987432211112345566666553

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.84  E-value=7.1e-20  Score=197.11  Aligned_cols=192  Identities=23%  Similarity=0.333  Sum_probs=158.6

Q ss_pred             CHHHHHHHHHHHHHHcCCCCCHHHHHhhcCCCHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHhhh---cCCCCCchHHH
Q 017995            2 TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLP-CAKHEFVNEVYSMFSDHL---CKVKALPGANR   77 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~pgv~~   77 (362)
                      |+..+.++|+++++++|++++.+++..++|.+..+++..+...++.+ .+.++..+.+.+.+...+   ....++||+.+
T Consensus        89 S~~~~~~a~~~~~~~~G~~it~e~~~~~~G~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~e  168 (1057)
T PLN02919         89 SEEPSRRAAVDVFAEMGVEVTVEDFVPFMGTGEANFLGGVASVKGVKGFDPDAAKKRFFEIYLEKYAKPNSGIGFPGALE  168 (1057)
T ss_pred             ChHHHHHHHHHHHHHcCCCCCHHHHHHHhCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhhhcccCccCccHHH
Confidence            67889999999999999999888888999999888887777666553 344444444444444332   13458999999


Q ss_pred             HHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCc-CCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhh
Q 017995           78 LIKHLSCHGVPMALASNSHRATIESKISYQHGWN-ESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG  156 (362)
Q Consensus        78 ~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~-~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d  156 (362)
                      +|+.|+++|++++|+||+....++..| +++++. .+|+.+++++++..+||+|++|..++++++++|++||||||+..|
T Consensus       169 lL~~Lk~~G~~l~IvSn~~~~~~~~~L-~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~v~IgDs~~D  247 (1057)
T PLN02919        169 LITQCKNKGLKVAVASSADRIKVDANL-AAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECVVIEDALAG  247 (1057)
T ss_pred             HHHHHHhCCCeEEEEeCCcHHHHHHHH-HHcCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCcccEEEEcCCHHH
Confidence            999999999999999999999999888 889996 789999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCEEEEEcCCCCcccc-ccchhHhhccccccc
Q 017995          157 VVAGKAAGMEVVAVPSLPKQTHR-YTAADEVINSLLDLR  194 (362)
Q Consensus       157 ~~aA~~aG~~~i~v~~~~~~~~~-~ssa~~vi~~l~el~  194 (362)
                      +++|+++||++|+|.+.....+. ...++.+++++.++.
T Consensus       248 i~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~  286 (1057)
T PLN02919        248 VQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNIS  286 (1057)
T ss_pred             HHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCC
Confidence            99999999999999886432222 234566777777653

>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase

Probab=99.84  E-value=6.7e-20  Score=162.80  Aligned_cols=165  Identities=27%  Similarity=0.331  Sum_probs=127.1

Q ss_pred             CHHHHHHHHHHHHHHcCCCCCHHHHHhh------------------cCCCHHHH----HHHHHHHhCCCCCHHHHHHHHH
Q 017995            2 TDGMFSEVLKTFLVKYGKEWDGREKHKI------------------VGKTPLEE----AAIIVEDYGLPCAKHEFVNEVY   59 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~~~~~~~~~~------------------~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~   59 (362)
                      |+..+..+++++++++|++++.+++...                  .|.+..+.    ++.++...+.+ +.+++...+.
T Consensus        14 ~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~   92 (203)
T TIGR02252        14 LKEPVGEVYCEIARKYGVEVSPDELEQAFRRAFKAMSEAFPNFGFSSGLTPQQWWQKLVRDTFGRAGVP-DPESFEKIFE   92 (203)
T ss_pred             eCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHHHHhcCCC-CchhHHHHHH
Confidence            3456788999999999998765543211                  15565433    33334444432 2233333333


Q ss_pred             HHHHhhh--cCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHH
Q 017995           60 SMFSDHL--CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAA  137 (362)
Q Consensus        60 ~~~~~~~--~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~  137 (362)
                      ..+....  ....++||+.++|+.|+++|++++|+||++... ...+ +++|+..+|+.|+++++++.+||+|++|..++
T Consensus        93 ~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~-~~~l-~~~~l~~~fd~i~~s~~~~~~KP~~~~~~~~~  170 (203)
T TIGR02252        93 ELYSYFATPEPWQVYPDAIKLLKDLRERGLILGVISNFDSRL-RGLL-EALGLLEYFDFVVTSYEVGAEKPDPKIFQEAL  170 (203)
T ss_pred             HHHHHhcCCCcceeCcCHHHHHHHHHHCCCEEEEEeCCchhH-HHHH-HHCCcHHhcceEEeecccCCCCCCHHHHHHHH
Confidence            3333222  346899999999999999999999999998764 6677 88999999999999999999999999999999


Q ss_pred             HHcCCCCCcEEEEecCH-hhHHHHHHcCCEEEE
Q 017995          138 KRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVA  169 (362)
Q Consensus       138 ~~~~~~p~~~l~igDs~-~d~~aA~~aG~~~i~  169 (362)
                      ++++++|++|+||||+. .|+++|+++|+.+|+
T Consensus       171 ~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~~i~  203 (203)
T TIGR02252       171 ERAGISPEEALHIGDSLRNDYQGARAAGWRALL  203 (203)
T ss_pred             HHcCCChhHEEEECCCchHHHHHHHHcCCeeeC
Confidence            99999999999999998 899999999999874

Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.

>PLN02779 haloacid dehalogenase-like hydrolase family protein

Probab=99.84  E-value=1.5e-19  Score=169.05  Aligned_cols=192  Identities=26%  Similarity=0.368  Sum_probs=140.0

Q ss_pred             CH-HHHHHHHHHHHHHcCC-CC--CHHHHH--hhcCCCHHHHHHHHHHHhCCC--------CCH---HH----HHHHHHH
Q 017995            2 TD-GMFSEVLKTFLVKYGK-EW--DGREKH--KIVGKTPLEEAAIIVEDYGLP--------CAK---HE----FVNEVYS   60 (362)
Q Consensus         2 Se-~~~~~a~~~~l~~~g~-~~--~~~~~~--~~~g~~~~~~~~~~~~~~~~~--------~~~---~~----~~~~~~~   60 (362)
                      |+ .++.++|+++++++|+ ++  +.+...  ..+|.+.......+. ..+.+        .+.   ++    +......
T Consensus        54 S~~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~  132 (286)
T PLN02779         54 TERDGHRVAFNDAFKEFGLRPVEWDVELYDELLNIGGGKERMTWYFN-ENGWPTSTIEKAPKDEEERKELVDSLHDRKTE  132 (286)
T ss_pred             cccHHHHHHHHHHHHHcCCCCCCCCHHHHHHHHccCCChHHHHHHHH-HcCCCccccccCCccchhhHHHHHHHHHHHHH
Confidence            45 7899999999999998 33  334332  226666655544432 22221        111   12    2222234


Q ss_pred             HHHhhhc--CCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcC---CcCCCcEEEeCCCCCCCCCCHHHHHH
Q 017995           61 MFSDHLC--KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHG---WNESFSVIVGSDEVRTGKPSPDIFLE  135 (362)
Q Consensus        61 ~~~~~~~--~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~g---l~~~f~~iv~~~d~~~gKp~p~~~~~  135 (362)
                      .|.....  .++++||+.++|+.|+++|++++|+||++...+...+ +.++   +...|+.+ +++++..+||+|++|..
T Consensus       133 ~y~~~~~~~~~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l-~~~~~~~~~~~~~~v-~~~~~~~~KP~p~~~~~  210 (286)
T PLN02779        133 LFKELIESGALPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIV-NTLLGPERAQGLDVF-AGDDVPKKKPDPDIYNL  210 (286)
T ss_pred             HHHHHHHhcCCCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HHhccccccCceEEE-eccccCCCCCCHHHHHH
Confidence            4444432  3689999999999999999999999999999998877 5553   33444544 88888889999999999


Q ss_pred             HHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEEEcCCCCccccccchhHhhccccccccc
Q 017995          136 AAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPE  196 (362)
Q Consensus       136 ~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~~~~~~~~~~ssa~~vi~~l~el~~~  196 (362)
                      ++++++++|++|+||||+..|+++|+++|+.+|+|.++.........++.++.++.++...
T Consensus       211 a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~~~~l~~~  271 (286)
T PLN02779        211 AAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDCLGDVPLE  271 (286)
T ss_pred             HHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECChhhcchh
Confidence            9999999999999999999999999999999999988654333334567788888776443

>PRK09449 dUMP phosphatase; Provisional

Probab=99.84  E-value=9.5e-20  Score=164.31  Aligned_cols=180  Identities=21%  Similarity=0.309  Sum_probs=130.3

Q ss_pred             HHHHHHHHHHHcCCCCCHHHHHhh--cCCCHH-----------HH----HHHHHHHhCCCCCHHHHHHHHHHHHHhhh-c
Q 017995            6 FSEVLKTFLVKYGKEWDGREKHKI--VGKTPL-----------EE----AAIIVEDYGLPCAKHEFVNEVYSMFSDHL-C   67 (362)
Q Consensus         6 ~~~a~~~~l~~~g~~~~~~~~~~~--~g~~~~-----------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~   67 (362)
                      ..++++++++++|++.+.+.+..+  +|.+..           +.    +..+...++.  +.+++..    .+...+ .
T Consensus        19 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~----~~~~~~~~   92 (224)
T PRK09449         19 AFAGLQRMFSRYGVDFTAEDFQDYQAVNKPLWVDYQNGAITALQLQHTRFESWAEKLNV--TPGELNS----AFLNAMAE   92 (224)
T ss_pred             hhHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHcCC--CHHHHHH----HHHHHHhh
Confidence            357888999999988776655443  222111           11    1112222222  1222222    232222 3


Q ss_pred             CCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCC-CCc
Q 017995           68 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME-PSS  146 (362)
Q Consensus        68 ~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~-p~~  146 (362)
                      ..+++||+.++|+.|+ +|++++|+||++...++..+ +++|+.++|+.|+++++++..||+|++|..+++++|+. +++
T Consensus        93 ~~~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l-~~~~l~~~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~  170 (224)
T PRK09449         93 ICTPLPGAVELLNALR-GKVKMGIITNGFTELQQVRL-ERTGLRDYFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRSR  170 (224)
T ss_pred             cCccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHH-HhCChHHHcCEEEEECccCCCCCCHHHHHHHHHHcCCCCccc
Confidence            4789999999999999 57999999999999998888 88999999999999999999999999999999999985 479


Q ss_pred             EEEEecCH-hhHHHHHHcCCEEEEEcCCCCccccccchhHhhcccccc
Q 017995          147 SLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL  193 (362)
Q Consensus       147 ~l~igDs~-~d~~aA~~aG~~~i~v~~~~~~~~~~ssa~~vi~~l~el  193 (362)
                      |+||||+. .|+++|+++|+.++++............++.+++++.++
T Consensus       171 ~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~~~~el  218 (224)
T PRK09449        171 VLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVSSLSEL  218 (224)
T ss_pred             EEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEECCHHHH
Confidence            99999998 699999999999999975322111111345666666553

>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated

Probab=99.83  E-value=1.3e-19  Score=180.47  Aligned_cols=187  Identities=14%  Similarity=0.156  Sum_probs=148.4

Q ss_pred             CHHHHHHHHHHHHHHcC------CCCCHHHHHhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhh--cCCCCCc
Q 017995            2 TDGMFSEVLKTFLVKYG------KEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHL--CKVKALP   73 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p   73 (362)
                      |++.+.++|++++++++      ...+.+.+.+.+|.+..+.++.+....+.+ ..++....+.+.+....  ...+++|
T Consensus       255 s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~p  333 (459)
T PRK06698        255 TDKILELSLDDTFDHLRSLQLWDTVTPIDKYREIMGVPLPKVWEALLPDHSLE-IREQTDAYFLERLIENIKSGKGALYP  333 (459)
T ss_pred             chhHHHHHHHHHHHHHhhhcccCCCCCHHHHHHHcCCChHHHHHHHhhhcchh-HHHHHHHHHHHHhHHHHhhcCCCcCC
Confidence            67889999999999984      223567788899999999888877654432 12334444444444333  3578999


Q ss_pred             hHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecC
Q 017995           74 GANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDS  153 (362)
Q Consensus        74 gv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs  153 (362)
                      |+.++|+.|+++|++++|+||++...++..+ +.+++.++|+.+++++++. .||+|+.|..++++++  |++|+||||+
T Consensus       334 G~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l-~~~~l~~~f~~i~~~d~v~-~~~kP~~~~~al~~l~--~~~~v~VGDs  409 (459)
T PRK06698        334 NVKEIFTYIKENNCSIYIASNGLTEYLRAIV-SYYDLDQWVTETFSIEQIN-SLNKSDLVKSILNKYD--IKEAAVVGDR  409 (459)
T ss_pred             CHHHHHHHHHHCCCeEEEEeCCchHHHHHHH-HHCCcHhhcceeEecCCCC-CCCCcHHHHHHHHhcC--cceEEEEeCC
Confidence            9999999999999999999999999999999 8999999999999999884 4778899999998864  7899999999


Q ss_pred             HhhHHHHHHcCCEEEEEcCCCCccccccchhHhhcccccc
Q 017995          154 VIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL  193 (362)
Q Consensus       154 ~~d~~aA~~aG~~~i~v~~~~~~~~~~ssa~~vi~~l~el  193 (362)
                      .+|+++|+++|+.++++.++.........++.++.++.++
T Consensus       410 ~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~~l~el  449 (459)
T PRK06698        410 LSDINAAKDNGLIAIGCNFDFAQEDELAQADIVIDDLLEL  449 (459)
T ss_pred             HHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeCCHHHH
Confidence            9999999999999999988543322233456777777664

>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II

Probab=99.83  E-value=2.3e-19  Score=158.72  Aligned_cols=133  Identities=20%  Similarity=0.340  Sum_probs=114.8

Q ss_pred             HHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhcCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCC
Q 017995           35 LEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF  114 (362)
Q Consensus        35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f  114 (362)
                      .+.+..+...++.+.+.+. ...    +.+.+...+++||+.++|+.|+++|++++++||++...++..+ +++|+.++|
T Consensus        62 ~~~~~~~~~~~g~~~~~~~-~~~----~~~~~~~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l-~~~gl~~~f  135 (198)
T TIGR01428        62 REALRYLLGRLGLEDDESA-ADR----LAEAYLRLPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLV-KHAGLDDPF  135 (198)
T ss_pred             HHHHHHHHHHcCCCCCHHH-HHH----HHHHHhcCCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HHCCChhhh
Confidence            3555666777777644332 222    2333356789999999999999999999999999999999888 889999999


Q ss_pred             cEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEEEcCC
Q 017995          115 SVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL  173 (362)
Q Consensus       115 ~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~~~  173 (362)
                      +.|+++++++..||+|++|..++++++++|++|++|||+..|+++|+++|+.+|+|...
T Consensus       136 d~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~i~v~r~  194 (198)
T TIGR01428       136 DAVLSADAVRAYKPAPQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKTAWVNRP  194 (198)
T ss_pred             heeEehhhcCCCCCCHHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcEEEecCC
Confidence            99999999999999999999999999999999999999999999999999999999773

Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.

>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548

Probab=99.81  E-value=1.5e-18  Score=153.50  Aligned_cols=160  Identities=14%  Similarity=0.178  Sum_probs=127.0

Q ss_pred             CHHHHHHHHHHHHHHcC-CCCCHHHHHhhcCCCH---------HHHHHHHHHHhC----CCCCHHHHHHHHHHHHHhhh-
Q 017995            2 TDGMFSEVLKTFLVKYG-KEWDGREKHKIVGKTP---------LEEAAIIVEDYG----LPCAKHEFVNEVYSMFSDHL-   66 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g-~~~~~~~~~~~~g~~~---------~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~-   66 (362)
                      |++.+..+++++++++| .+++.+.+.++.|.+.         ....+.+.....    .....+++.+.+.+.|.... 
T Consensus        14 s~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (197)
T TIGR01548        14 VSQSYRRAIIDTVEHFGGVSVTHADIDHTKLAGNANNDWQLTHRLVVDGLNSASSERVRDAPTLEAVTAQFQALYQGVGY   93 (197)
T ss_pred             chHHHHHHHHHHHHHHcCCCCCHHHHHHHHHccCccCchHHHHHHHHHhhhcccchhccCCccHHHHHHHHHHHHcCCcc
Confidence            67889999999999998 5678788888887543         112222211111    12344566666666665421 


Q ss_pred             ---------cCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHH
Q 017995           67 ---------CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAA  137 (362)
Q Consensus        67 ---------~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~  137 (362)
                               ....+.+++.++|+.|+++|++++|+||+++..++..| +++|+..+|+.++++++... ||+|+.|..++
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l-~~~gl~~~f~~~~~~~~~~~-KP~p~~~~~~~  171 (197)
T TIGR01548        94 YRDLATLGLIEDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFL-TTHGLEILFPVQIWMEDCPP-KPNPEPLILAA  171 (197)
T ss_pred             cccccchhhhccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHH-HHcCchhhCCEEEeecCCCC-CcCHHHHHHHH
Confidence                     12345667799999999999999999999999999999 89999999999999999877 99999999999


Q ss_pred             HHcCCCCCcEEEEecCHhhHHHHHHc
Q 017995          138 KRLNMEPSSSLVIEDSVIGVVAGKAA  163 (362)
Q Consensus       138 ~~~~~~p~~~l~igDs~~d~~aA~~a  163 (362)
                      ++++++|++|+||||+.+|+.+|+++
T Consensus       172 ~~~~~~~~~~i~vGD~~~Di~aA~~a  197 (197)
T TIGR01548       172 KALGVEACHAAMVGDTVDDIITGRKA  197 (197)
T ss_pred             HHhCcCcccEEEEeCCHHHHHHHHhC
Confidence            99999999999999999999999875

All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.

>PRK09456 ?-D-glucose-1-phosphatase; Provisional

Probab=99.81  E-value=9.1e-19  Score=155.22  Aligned_cols=136  Identities=15%  Similarity=0.188  Sum_probs=116.2

Q ss_pred             CCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhcCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCc
Q 017995           32 KTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN  111 (362)
Q Consensus        32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~  111 (362)
                      .+..+.+..+.+.++.+.+.+++...+.+.+      ..++||+.++|+.|+++|++++|+||++...+...+....++.
T Consensus        52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~  125 (199)
T PRK09456         52 ISDEAFAEALCHEMALSLSYEQFAHGWQAVF------VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVR  125 (199)
T ss_pred             CCHHHHHHHHHHHhCCCCCHHHHHHHHHHHH------hccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHH
Confidence            5677777888888887666555555444433      3689999999999999999999999999887766552334788


Q ss_pred             CCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEEEcCC
Q 017995          112 ESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL  173 (362)
Q Consensus       112 ~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~~~  173 (362)
                      .+|+.++++++++.+||+|++|..+++++|++|++|+||||+..|+++|+++|+.++.+...
T Consensus       126 ~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~i~~~~~  187 (199)
T PRK09456        126 AAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITSILVTDK  187 (199)
T ss_pred             HhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEEEEecCC
Confidence            89999999999999999999999999999999999999999999999999999999998763

>PRK14988 GMP/IMP nucleotidase; Provisional

Probab=99.80  E-value=1.6e-18  Score=156.50  Aligned_cols=107  Identities=15%  Similarity=0.235  Sum_probs=100.3

Q ss_pred             cCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCc
Q 017995           67 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS  146 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~  146 (362)
                      .+..++||+.++|+.|+++|++++|+||++...++..+ +++|+.++|+.|+++++++.+||+|++|..+++++|++|++
T Consensus        90 ~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l-~~~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~  168 (224)
T PRK14988         90 PRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKL-EHTGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAER  168 (224)
T ss_pred             ccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHH-HHCCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHH
Confidence            56899999999999999999999999999999999888 88999999999999999999999999999999999999999


Q ss_pred             EEEEecCHhhHHHHHHcCCE-EEEEcCCC
Q 017995          147 SLVIEDSVIGVVAGKAAGME-VVAVPSLP  174 (362)
Q Consensus       147 ~l~igDs~~d~~aA~~aG~~-~i~v~~~~  174 (362)
                      |+||||+..|+++|+++|+. +++|....
T Consensus       169 ~l~igDs~~di~aA~~aG~~~~~~v~~~~  197 (224)
T PRK14988        169 TLFIDDSEPILDAAAQFGIRYCLGVTNPD  197 (224)
T ss_pred             EEEEcCCHHHHHHHHHcCCeEEEEEeCCC
Confidence            99999999999999999998 46676643

>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

Probab=99.79  E-value=7.3e-18  Score=146.66  Aligned_cols=135  Identities=33%  Similarity=0.498  Sum_probs=109.5

Q ss_pred             HHHHHHHHHHHhCCCCCHHHHHHH------HHHHHHhhhcC--CCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHH
Q 017995           34 PLEEAAIIVEDYGLPCAKHEFVNE------VYSMFSDHLCK--VKALPGANRLIKHLSCHGVPMALASNSHRATIESKIS  105 (362)
Q Consensus        34 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~--~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~  105 (362)
                      .....+.+...++.......+...      ....+......  .+++||+.++|+.|+++|++++++||++... ...+ 
T Consensus        41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~-  118 (183)
T TIGR01509        41 LELALRRWKEKYGRTMSAEDFYLLYENADIKQLFYDAILDEEKLKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLV-  118 (183)
T ss_pred             HHHHhhccccccCCCCCcHHHHHHHhHHHHHHHHHHHHHhccCCccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHH-
Confidence            444444454446655444443322      33344443333  7899999999999999999999999999988 5555 


Q ss_pred             hhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEEE
Q 017995          106 YQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV  170 (362)
Q Consensus       106 ~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v  170 (362)
                      .++|+.++|+.++++++++.+||+|+.|..++++++++|++|++|||+..|+++|+++|+.+|+|
T Consensus       119 ~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~~i~v  183 (183)
T TIGR01509       119 QELGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGMHTVLV  183 (183)
T ss_pred             HhcCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCCEEEeC
Confidence            56899999999999999999999999999999999999999999999999999999999999875

HAD subfamilies caused by an overly broad single model.

>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase

Probab=99.78  E-value=4.9e-18  Score=151.75  Aligned_cols=104  Identities=22%  Similarity=0.302  Sum_probs=93.5

Q ss_pred             CCCCCchHHHHHHHHHHCCCcEEEEcCCChHh--HHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 017995           68 KVKALPGANRLIKHLSCHGVPMALASNSHRAT--IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS  145 (362)
Q Consensus        68 ~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~--i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~  145 (362)
                      ..+++||+.++|+.|+++|++++|+||++...  ....+ ...++.++|+.|+++++.+..||+|++|..+++++|++|+
T Consensus        92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~-~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~  170 (211)
T TIGR02247        92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEAL-LPGDIMALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPE  170 (211)
T ss_pred             ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHh-hhhhhHhhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHH
Confidence            57899999999999999999999999987654  22233 4567889999999999999999999999999999999999


Q ss_pred             cEEEEecCHhhHHHHHHcCCEEEEEcC
Q 017995          146 SSLVIEDSVIGVVAGKAAGMEVVAVPS  172 (362)
Q Consensus       146 ~~l~igDs~~d~~aA~~aG~~~i~v~~  172 (362)
                      +|+||||+..|+.+|+++|+.++++..
T Consensus       171 ~~l~i~D~~~di~aA~~aG~~~i~v~~  197 (211)
T TIGR02247       171 ECVFLDDLGSNLKPAAALGITTIKVSD  197 (211)
T ss_pred             HeEEEcCCHHHHHHHHHcCCEEEEECC
Confidence            999999999999999999999999866

These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.

>PRK10748 flavin mononucleotide phosphatase; Provisional

Probab=99.76  E-value=9.9e-18  Score=152.76  Aligned_cols=150  Identities=17%  Similarity=0.210  Sum_probs=112.9

Q ss_pred             HHHHHHHHhCCCCCHH-HHHHHHHHHHHhhhcCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCc
Q 017995           37 EAAIIVEDYGLPCAKH-EFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS  115 (362)
Q Consensus        37 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~  115 (362)
                      .+..+...+|.+.+.. .........+......+.++||+.++|+.|++. ++++++||++..     + +.+||.++|+
T Consensus        79 ~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~-~~~gl~~~fd  151 (238)
T PRK10748         79 AIEQAMLDAGLSAEEASAGADAAMINFAKWRSRIDVPQATHDTLKQLAKK-WPLVAITNGNAQ-----P-ELFGLGDYFE  151 (238)
T ss_pred             HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHcC-CCEEEEECCCch-----H-HHCCcHHhhc
Confidence            3455566677653221 122222233443335689999999999999975 999999998765     3 6689999999


Q ss_pred             EEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecC-HhhHHHHHHcCCEEEEEcCCCCc----cccccchhHhhccc
Q 017995          116 VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDS-VIGVVAGKAAGMEVVAVPSLPKQ----THRYTAADEVINSL  190 (362)
Q Consensus       116 ~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs-~~d~~aA~~aG~~~i~v~~~~~~----~~~~ssa~~vi~~l  190 (362)
                      .|+++++++..||+|++|..++++++++|++|+||||+ ..|+.+|+++|+.++++......    ....-.++..+++|
T Consensus       152 ~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~p~~~i~~l  231 (238)
T PRK10748        152 FVLRAGPHGRSKPFSDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACWINPENGDLMQTWDSRLLPHIEISRL  231 (238)
T ss_pred             eeEecccCCcCCCcHHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEEEcCCCccccccccccCCCCEEECCH
Confidence            99999999999999999999999999999999999999 59999999999999999774321    01001245566666


Q ss_pred             ccc
Q 017995          191 LDL  193 (362)
Q Consensus       191 ~el  193 (362)
                      .++
T Consensus       232 ~el  234 (238)
T PRK10748        232 ASL  234 (238)
T ss_pred             HHH
Confidence            553

>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase

Probab=99.75  E-value=1.8e-17  Score=144.92  Aligned_cols=156  Identities=20%  Similarity=0.216  Sum_probs=116.5

Q ss_pred             HHHHHHHHHHHHH-----HcCCCCCHH-HHH----hhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhcCCCCC
Q 017995            3 DGMFSEVLKTFLV-----KYGKEWDGR-EKH----KIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKAL   72 (362)
Q Consensus         3 e~~~~~a~~~~l~-----~~g~~~~~~-~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (362)
                      ...+..+++++++     ++|++.... .+.    ...|.+.....    ...+  .+.+++...+.+.  ......+++
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~g~~~~~~~----~~~~--~~~~~~~~~~~~~--~~~~~~~~~   86 (184)
T TIGR01993        15 SAGIFLQIDRNITEFVAARLKLSEEEARVLRKDYYREYGTTLAGLM----ILHE--IDADEYLRYVHGR--LPYEKLKPD   86 (184)
T ss_pred             cccHHHHHHHHHHHHHHHHcCcCHHHHHHHHHHHHHHHchHHHHHH----HhhC--CCHHHHHHHHhcc--CCHHhCCCC
Confidence            3456677776654     567654322 222    23454444432    2222  2333333333221  112357899


Q ss_pred             chHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCC----CCCCHHHHHHHHHHcCCCCCcEE
Q 017995           73 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRT----GKPSPDIFLEAAKRLNMEPSSSL  148 (362)
Q Consensus        73 pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~----gKp~p~~~~~~~~~~~~~p~~~l  148 (362)
                      ||+.++|+.|+   ++++|+||++...+...+ +.+|+.++|+.|+++++...    .||+|++|..+++++|++|++|+
T Consensus        87 ~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l-~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l  162 (184)
T TIGR01993        87 PELRNLLLRLP---GRKIIFTNGDRAHARRAL-NRLGIEDCFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVDPERAI  162 (184)
T ss_pred             HHHHHHHHhCC---CCEEEEeCCCHHHHHHHH-HHcCcHhhhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCCccceE
Confidence            99999999997   489999999999999999 88999999999999999887    59999999999999999999999


Q ss_pred             EEecCHhhHHHHHHcCCEEEEE
Q 017995          149 VIEDSVIGVVAGKAAGMEVVAV  170 (362)
Q Consensus       149 ~igDs~~d~~aA~~aG~~~i~v  170 (362)
                      ||||+..|+++|+++|+++++|
T Consensus       163 ~vgD~~~di~aA~~~G~~~i~v  184 (184)
T TIGR01993       163 FFDDSARNIAAAKALGMKTVLV  184 (184)
T ss_pred             EEeCCHHHHHHHHHcCCEEeeC
Confidence            9999999999999999999875

These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).

>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase

Probab=99.74  E-value=1.3e-17  Score=144.88  Aligned_cols=124  Identities=24%  Similarity=0.304  Sum_probs=97.5

Q ss_pred             cCCCCCchHHHHHHHHHHCCCcEEEEcCCCh---------------HhHHHHHHhhcCCcCCCcEEEeC-----------
Q 017995           67 CKVKALPGANRLIKHLSCHGVPMALASNSHR---------------ATIESKISYQHGWNESFSVIVGS-----------  120 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~---------------~~i~~~L~~~~gl~~~f~~iv~~-----------  120 (362)
                      .+++++||+.++|+.|+++|++++|+||++.               ..+...+ ..+++.  |+.++.+           
T Consensus        23 ~~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~--~~~i~~~~~~~~~~~~~~   99 (176)
T TIGR00213        23 DNFEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSL-AERDVD--LDGIYYCPHHPEGVEEFR   99 (176)
T ss_pred             HHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHH-HHcCCC--ccEEEECCCCCccccccc
Confidence            3578999999999999999999999999985               3333445 555554  6666543           


Q ss_pred             CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEE-EEEcCCCCccccc-cchhHhhcccccc
Q 017995          121 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV-VAVPSLPKQTHRY-TAADEVINSLLDL  193 (362)
Q Consensus       121 ~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~-i~v~~~~~~~~~~-ssa~~vi~~l~el  193 (362)
                      +++..+||+|++|..++++++++|++|+||||+.+|+++|+++|+.+ +++.++....... ..++.+++++.++
T Consensus       100 ~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el  174 (176)
T TIGR00213       100 QVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNSLADL  174 (176)
T ss_pred             CCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEeccHHHh
Confidence            35567899999999999999999999999999999999999999998 7888764322211 2357777776654

This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).

>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E

Probab=99.73  E-value=1.7e-16  Score=134.51  Aligned_cols=142  Identities=24%  Similarity=0.374  Sum_probs=112.8

Q ss_pred             CHHHHHHHHHHHHHHcCCCCCHHHHHhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhcCCCCCchHHHHHHH
Q 017995            2 TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKH   81 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~~~L~~   81 (362)
                      |...+..+|+++++++|.  +.+.+....|.......+ +..      ..+++.        ........+||+.++|+.
T Consensus        13 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~-~~~------~~~~~~--------~~~~~~~~~~g~~e~l~~   75 (154)
T TIGR01549        13 SSFAIRRAFEETLEEFGE--DFQALKALRGLAEELLYR-IAT------SFEELL--------GYDAEEAYIRGAADLLKR   75 (154)
T ss_pred             cHHHHHHHHHHHHHHhcc--cHHHHHHHHccChHHHHH-HHH------HHHHHh--------CcchhheeccCHHHHHHH
Confidence            456889999999999985  444555556554333211 111      111111        122356678999999999


Q ss_pred             HHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHH
Q 017995           82 LSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGK  161 (362)
Q Consensus        82 L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~  161 (362)
                      |+++|++++|+||++...+...+ +.+ +..+|+.+++++++. +||+|+.|..++++++++| +|+||||+..|+++|+
T Consensus        76 L~~~g~~~~i~T~~~~~~~~~~~-~~~-l~~~f~~i~~~~~~~-~Kp~~~~~~~~~~~~~~~~-~~l~iGDs~~Di~aa~  151 (154)
T TIGR01549        76 LKEAGIKLGIISNGSLRAQKLLL-RKH-LGDYFDLILGSDEFG-AKPEPEIFLAALESLGLPP-EVLHVGDNLNDIEGAR  151 (154)
T ss_pred             HHHCcCeEEEEeCCchHHHHHHH-HHH-HHhcCcEEEecCCCC-CCcCHHHHHHHHHHcCCCC-CEEEEeCCHHHHHHHH
Confidence            99999999999999999999888 666 788999999999988 9999999999999999999 9999999999999999


Q ss_pred             HcC
Q 017995          162 AAG  164 (362)
Q Consensus       162 ~aG  164 (362)
                      ++|
T Consensus       152 ~aG  154 (154)
T TIGR01549       152 NAG  154 (154)
T ss_pred             Hcc
Confidence            987

HAD subfamilies caused by an overly broad single model.

>PRK06769 hypothetical protein; Validated

Probab=99.72  E-value=2.4e-17  Score=142.86  Aligned_cols=125  Identities=14%  Similarity=0.222  Sum_probs=97.0

Q ss_pred             CCCCCchHHHHHHHHHHCCCcEEEEcCCChH--------hHHHHHHhhcCCcCCCcEEE-eCCCCCCCCCCHHHHHHHHH
Q 017995           68 KVKALPGANRLIKHLSCHGVPMALASNSHRA--------TIESKISYQHGWNESFSVIV-GSDEVRTGKPSPDIFLEAAK  138 (362)
Q Consensus        68 ~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~--------~i~~~L~~~~gl~~~f~~iv-~~~d~~~gKp~p~~~~~~~~  138 (362)
                      .+.++||+.++|+.|+++|++++|+||++..        .+...+ +.+|+.++|..+. +++++...||+|++|..+++
T Consensus        26 ~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l-~~~g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~  104 (173)
T PRK06769         26 SFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQEL-KGFGFDDIYLCPHKHGDGCECRKPSTGMLLQAAE  104 (173)
T ss_pred             HeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHH-HhCCcCEEEECcCCCCCCCCCCCCCHHHHHHHHH
Confidence            4689999999999999999999999998752        122335 5677755443332 45667789999999999999


Q ss_pred             HcCCCCCcEEEEecCHhhHHHHHHcCCEEEEEcCCCCcc------cc--ccchhHhhcccccc
Q 017995          139 RLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQT------HR--YTAADEVINSLLDL  193 (362)
Q Consensus       139 ~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~~~~~~~------~~--~ssa~~vi~~l~el  193 (362)
                      +++++|++|+||||+..|+++|+++|+.++++.++....      +.  ...++.+++++.++
T Consensus       105 ~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~~~~~el  167 (173)
T PRK06769        105 KHGLDLTQCAVIGDRWTDIVAAAKVNATTILVRTGAGYDALHTYRDKWAHIEPNYIAENFEDA  167 (173)
T ss_pred             HcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCchhhhhhhcccccCCCcchhhCHHHH
Confidence            999999999999999999999999999999998854221      11  12345666666553

>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=99.70  E-value=2.2e-16  Score=142.43  Aligned_cols=123  Identities=28%  Similarity=0.398  Sum_probs=106.2

Q ss_pred             CCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 017995           68 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS  147 (362)
Q Consensus        68 ~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~  147 (362)
                      ..+++|++.++|+.|+++ ++++++||+....+...+ .++||.++||.|+++++++..||+|++|..+++++|++|++|
T Consensus        97 ~~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l-~~~gl~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~  174 (229)
T COG1011          97 LLPDYPEALEALKELGKK-YKLGILTNGARPHQERKL-RQLGLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEA  174 (229)
T ss_pred             hCccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHH-HHcCChhhhheEEEecccccCCCCcHHHHHHHHHcCCCcceE
Confidence            589999999999999999 999999999888888888 889999999999999999999999999999999999999999


Q ss_pred             EEEecCH-hhHHHHHHcCCEEEEEcCCCCcc-ccccchhHhhccccc
Q 017995          148 LVIEDSV-IGVVAGKAAGMEVVAVPSLPKQT-HRYTAADEVINSLLD  192 (362)
Q Consensus       148 l~igDs~-~d~~aA~~aG~~~i~v~~~~~~~-~~~ssa~~vi~~l~e  192 (362)
                      +||||+. +|+.+|+++||++|++....... .....++..+.++.+
T Consensus       175 l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~~~~~~~i~~l~~  221 (229)
T COG1011         175 LFVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEISSLAE  221 (229)
T ss_pred             EEECCChhhhhHHHHhcCcEEEEECCCCCCCCCCccCCceEEcCHHH
Confidence            9999999 78899999999999998743211 011233455555554

>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase

Probab=99.70  E-value=8.8e-17  Score=139.29  Aligned_cols=149  Identities=17%  Similarity=0.263  Sum_probs=113.8

Q ss_pred             CHHHHHHHHHHHHHHcCCC---CCH-----HHHHhhcCC--CHHH----HHHHHHHHhCCCCCHHHHHHHHHHHHHhhhc
Q 017995            2 TDGMFSEVLKTFLVKYGKE---WDG-----REKHKIVGK--TPLE----EAAIIVEDYGLPCAKHEFVNEVYSMFSDHLC   67 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~---~~~-----~~~~~~~g~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   67 (362)
                      |+..+..+++.+++.++..   ++.     .......|.  ...+    .++.+...++.+.+.+ ..    +.+...+.
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~----~~~~~~~~   87 (175)
T TIGR01493        13 VHGGVRACLAAIAPEGGAFSDLWRAKQQEYSWRRSLMGDRRAFPEDTVRALRYIADRLGLDAEPK-YG----ERLRDAYK   87 (175)
T ss_pred             cHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHcCCCCCHH-HH----HHHHHHHh
Confidence            4567778888887775521   111     112233332  2223    5677777788775543 22    23333334


Q ss_pred             CCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 017995           68 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS  147 (362)
Q Consensus        68 ~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~  147 (362)
                      .+.++||+.++|+       +++|+||++...++..+ +++++.++|+.|+++++++..||+|++|..+++++|++|++|
T Consensus        88 ~~~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l-~~~~l~~~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~  159 (175)
T TIGR01493        88 NLPPWPDSAAALA-------RVAILSNASHWAFDQFA-QQAGLPWYFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDRV  159 (175)
T ss_pred             cCCCCCchHHHHH-------HHhhhhCCCHHHHHHHH-HHCCCHHHHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHHe
Confidence            6789999999998       37899999999999888 889999999999999999999999999999999999999999


Q ss_pred             EEEecCHhhHHHHHHc
Q 017995          148 LVIEDSVIGVVAGKAA  163 (362)
Q Consensus       148 l~igDs~~d~~aA~~a  163 (362)
                      +||||+.+|+.+|+++
T Consensus       160 l~vgD~~~Di~~A~~~  175 (175)
T TIGR01493       160 LMVAAHQWDLIGARKF  175 (175)
T ss_pred             EeEecChhhHHHHhcC
Confidence            9999999999999874

The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o

>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated

Probab=99.69  E-value=1.1e-16  Score=139.70  Aligned_cols=128  Identities=27%  Similarity=0.315  Sum_probs=98.9

Q ss_pred             HhhhcCCCCCchHHHHHHHHHHCCCcEEEEcCCCh---------------HhHHHHHHhhcCCcCCCcEEEeC-----CC
Q 017995           63 SDHLCKVKALPGANRLIKHLSCHGVPMALASNSHR---------------ATIESKISYQHGWNESFSVIVGS-----DE  122 (362)
Q Consensus        63 ~~~~~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~---------------~~i~~~L~~~~gl~~~f~~iv~~-----~d  122 (362)
                      ......+.++||+.++|+.|+++|++++|+||++.               +.+...+ +++|+  .|+.++.+     ++
T Consensus        22 ~~~~~~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l-~~~g~--~f~~i~~~~~~~~~~   98 (181)
T PRK08942         22 VKSPDEWIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSL-ADRGG--RLDGIYYCPHHPEDG   98 (181)
T ss_pred             cCCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHH-HHcCC--ccceEEECCCCCCCC
Confidence            33345678999999999999999999999999873               3334445 56666  47777654     35


Q ss_pred             CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEEEcCCCCcccc-ccch--hHhhcccccc
Q 017995          123 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR-YTAA--DEVINSLLDL  193 (362)
Q Consensus       123 ~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~~~~~~~~~-~ssa--~~vi~~l~el  193 (362)
                      +..+||+|++|..++++++++|++|+||||+.+|+.+|+++|+.++++.++...... ...+  +.++.++.++
T Consensus        99 ~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el  172 (181)
T PRK08942         99 CDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADL  172 (181)
T ss_pred             CcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceeecCHHHH
Confidence            678899999999999999999999999999999999999999999999875432111 1123  5566666553

>TIGR01261 hisB_Nterm histidinol-phosphatase

Probab=99.69  E-value=1.3e-16  Score=136.44  Aligned_cols=105  Identities=15%  Similarity=0.179  Sum_probs=93.4

Q ss_pred             cCCCCCchHHHHHHHHHHCCCcEEEEcCCC---------------hHhHHHHHHhhcCCcCCCcEEE-e----CCCCCCC
Q 017995           67 CKVKALPGANRLIKHLSCHGVPMALASNSH---------------RATIESKISYQHGWNESFSVIV-G----SDEVRTG  126 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~---------------~~~i~~~L~~~~gl~~~f~~iv-~----~~d~~~g  126 (362)
                      ..++++||+.++|+.|+++|++++|+||++               ...+...+ +.+|+.  |+.++ +    ++++...
T Consensus        26 ~~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l-~~~gl~--fd~ii~~~~~~~~~~~~~  102 (161)
T TIGR01261        26 EKLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIF-RSQGII--FDDVLICPHFPDDNCDCR  102 (161)
T ss_pred             HHeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHH-HHCCCc--eeEEEECCCCCCCCCCCC
Confidence            457899999999999999999999999973               55677777 888996  77665 4    5888889


Q ss_pred             CCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEEEcCCC
Q 017995          127 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP  174 (362)
Q Consensus       127 Kp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~~~~  174 (362)
                      ||+|+++..++++++++|++|+||||+.+|+++|+++|+.++++.+..
T Consensus       103 KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~~~~~  150 (161)
T TIGR01261       103 KPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQYDEEE  150 (161)
T ss_pred             CCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEEChhh
Confidence            999999999999999999999999999999999999999999998743

This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.

>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=99.69  E-value=1.9e-15  Score=135.40  Aligned_cols=113  Identities=13%  Similarity=0.113  Sum_probs=96.0

Q ss_pred             HHHHHHhhhcCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhc---CCcCCCcEEEeCCCCCCCCCCHHHHH
Q 017995           58 VYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQH---GWNESFSVIVGSDEVRTGKPSPDIFL  134 (362)
Q Consensus        58 ~~~~~~~~~~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~---gl~~~f~~iv~~~d~~~gKp~p~~~~  134 (362)
                      +.+.|.....+..++||+.++|+.|+++|++++|+||++...++..+ ++.   +|.++|+.++..  ...+||+|+.|.
T Consensus        83 w~~~Y~~~~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~-~~~~~~~L~~~f~~~fd~--~~g~KP~p~~y~  159 (220)
T TIGR01691        83 WRQGYESGELTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLF-GHSDAGNLTPYFSGYFDT--TVGLKTEAQSYV  159 (220)
T ss_pred             HHHHHhcCCcccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-hhccccchhhhcceEEEe--CcccCCCHHHHH
Confidence            45556554456789999999999999999999999999999877766 554   677777766542  223699999999


Q ss_pred             HHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEEEcCC
Q 017995          135 EAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL  173 (362)
Q Consensus       135 ~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~~~  173 (362)
                      .+++++|++|++|+||||+..|+++|+++||.++++.+.
T Consensus       160 ~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~v~r~  198 (220)
T TIGR01691       160 KIAGQLGSPPREILFLSDIINELDAARKAGLHTGQLVRP  198 (220)
T ss_pred             HHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEEEECC
Confidence            999999999999999999999999999999999998764

This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.

>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain

Probab=99.68  E-value=1.2e-16  Score=134.85  Aligned_cols=104  Identities=27%  Similarity=0.390  Sum_probs=87.0

Q ss_pred             cCCCCCchHHHHHHHHHHCCCcEEEEcCCCh---------------HhHHHHHHhhcCCcCCCcEEEe----CCCCCCCC
Q 017995           67 CKVKALPGANRLIKHLSCHGVPMALASNSHR---------------ATIESKISYQHGWNESFSVIVG----SDEVRTGK  127 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~---------------~~i~~~L~~~~gl~~~f~~iv~----~~d~~~gK  127 (362)
                      ..++++||+.++|+.|+++|++++|+||+++               ..+...+ +++++... ..+++    +++....|
T Consensus        24 ~~~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~l~~~-~~~~~~~~~~~~~~~~K  101 (147)
T TIGR01656        24 DDWQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELL-RQLGVAVD-GVLFCPHHPADNCSCRK  101 (147)
T ss_pred             HHeEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHH-HhCCCcee-EEEECCCCCCCCCCCCC
Confidence            3468999999999999999999999999874               3455556 77887522 12222    45556789


Q ss_pred             CCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEEEcC
Q 017995          128 PSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS  172 (362)
Q Consensus       128 p~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~~  172 (362)
                      |+|++|..++++++++|++|+||||+..|+++|+++|+++++|+.
T Consensus       102 P~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v~i~~  146 (147)
T TIGR01656       102 PKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAVLLVD  146 (147)
T ss_pred             CCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEEEecC
Confidence            999999999999999999999999999999999999999999975

This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.

>PHA02597 30

Probab=99.68  E-value=6.8e-16  Score=136.44  Aligned_cols=171  Identities=13%  Similarity=0.132  Sum_probs=120.3

Q ss_pred             HHHHHHHHHHcCCCCCHHHHHhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh-hhcCCCCCchHHHHHHHHHHC
Q 017995            7 SEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD-HLCKVKALPGANRLIKHLSCH   85 (362)
Q Consensus         7 ~~a~~~~l~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~pgv~~~L~~L~~~   85 (362)
                      ..++.++++++|++.  +++...+|.+....+...   ++.  +.+.+.+.+..++.. ......++||+.++|+.|++.
T Consensus        17 ~~~~~~~~~~~g~~~--~~~~~~~g~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~~pG~~e~L~~L~~~   89 (197)
T PHA02597         17 QSGLPYFAQKYNIPT--DHILKMIQDERFRDPGEL---FGC--DQELAKKLIEKYNNSDFIRYLSAYDDALDVINKLKED   89 (197)
T ss_pred             hhccHHHHHhcCCCH--HHHHHHHhHhhhcCHHHH---hcc--cHHHHHHHhhhhhHHHHHHhccCCCCHHHHHHHHHhc
Confidence            456788888999753  555566665444333332   222  222332323333222 225678999999999999987


Q ss_pred             CCcEEEEcCCChHhHHHHHHhhcCCcC----CCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHH
Q 017995           86 GVPMALASNSHRATIESKISYQHGWNE----SFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGK  161 (362)
Q Consensus        86 g~~~~i~S~~~~~~i~~~L~~~~gl~~----~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~  161 (362)
                       +++.++||++.......+ +.+++..    +|+.++++++.   ||+|+.|..+++++|  |++|+||||+..|+++|+
T Consensus        90 -~~~~i~Tn~~~~~~~~~~-~~~~l~~~f~~~f~~i~~~~~~---~~kp~~~~~a~~~~~--~~~~v~vgDs~~di~aA~  162 (197)
T PHA02597         90 -YDFVAVTALGDSIDALLN-RQFNLNALFPGAFSEVLMCGHD---ESKEKLFIKAKEKYG--DRVVCFVDDLAHNLDAAH  162 (197)
T ss_pred             -CCEEEEeCCccchhHHHH-hhCCHHHhCCCcccEEEEeccC---cccHHHHHHHHHHhC--CCcEEEeCCCHHHHHHHH
Confidence             578888888776655455 6667654    55778887764   677899999999999  899999999999999999


Q ss_pred             Hc--CCEEEEEcCCCCccccccchhHhhcccccc
Q 017995          162 AA--GMEVVAVPSLPKQTHRYTAADEVINSLLDL  193 (362)
Q Consensus       162 ~a--G~~~i~v~~~~~~~~~~ssa~~vi~~l~el  193 (362)
                      ++  ||+++++.++..  .....+++.+.++.++
T Consensus       163 ~a~~Gi~~i~~~~~~~--~~~~~~~~~~~~~~~~  194 (197)
T PHA02597        163 EALSQLPVIHMLRGER--DHIPKLAHRVKSWNDI  194 (197)
T ss_pred             HHHcCCcEEEecchhh--ccccchhhhhccHHHH
Confidence            99  999999988653  2223456777777764

2 hypothetical protein; Provisional

>TIGR01685 MDP-1 magnesium-dependent phosphatase-1

Probab=99.67  E-value=2e-16  Score=136.23  Aligned_cols=107  Identities=16%  Similarity=0.069  Sum_probs=97.0

Q ss_pred             cCCCCCchHHHHHHHHHHCCCcEEEEcCC-ChHhHHHHHHhhcCCc---------CCCcEEEeCCCCCCCCCCHHHHHHH
Q 017995           67 CKVKALPGANRLIKHLSCHGVPMALASNS-HRATIESKISYQHGWN---------ESFSVIVGSDEVRTGKPSPDIFLEA  136 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g~~~~i~S~~-~~~~i~~~L~~~~gl~---------~~f~~iv~~~d~~~gKp~p~~~~~~  136 (362)
                      .++.++||+.++|+.|+++|++++|+||+ ....++..+ +.+++.         ++|+.++++++....||.+.++..+
T Consensus        42 ~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L-~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~  120 (174)
T TIGR01685        42 TEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEIL-GTFEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKV  120 (174)
T ss_pred             CEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHH-HhCCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHh
Confidence            46889999999999999999999999998 888888888 889998         9999999999877778888888877


Q ss_pred             HHHc--CCCCCcEEEEecCHhhHHHHHHcCCEEEEEcCCC
Q 017995          137 AKRL--NMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP  174 (362)
Q Consensus       137 ~~~~--~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~~~~  174 (362)
                      .+.+  +++|++|+||||+..|+++|+++|+.++++.++.
T Consensus       121 ~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v~~g~  160 (174)
T TIGR01685       121 NKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCPSGM  160 (174)
T ss_pred             hhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEcCCCc
Confidence            7777  8999999999999999999999999999997753

This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.

>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=99.64  E-value=2.1e-15  Score=134.69  Aligned_cols=165  Identities=24%  Similarity=0.297  Sum_probs=124.2

Q ss_pred             HHHHHHHHHHHcCCCCCHHHHHh------------------hcC-CCHHHHHHHHHHHhCCCCCH---HHHHHHH-HHHH
Q 017995            6 FSEVLKTFLVKYGKEWDGREKHK------------------IVG-KTPLEEAAIIVEDYGLPCAK---HEFVNEV-YSMF   62 (362)
Q Consensus         6 ~~~a~~~~l~~~g~~~~~~~~~~------------------~~g-~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~   62 (362)
                      ....+.++.+.+|++.+.+.+..                  +.| .+..+.+..+..........   ++....+ ...|
T Consensus        25 ~~~~y~~i~~~~gl~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~l~~~~ww~~lv~~~f~~~~~~~~~~~~~~~~~~~~  104 (237)
T KOG3085|consen   25 VMEVYCEIAEAYGLEYDDSLIETIFRKDFKKMSEKGPFFGLYSGELTLSQWWPKLVESTFGKAGIDYEEELLENFSFRLF  104 (237)
T ss_pred             cHHHHHHHHHHhCCCCCHHHHhHhhhHHHHhhcccCCcccccCCcccHHHHHHHHHHHHhccccchhHHHHHhhhhhhee
Confidence            45677888889998865544321                  122 35666666555433222121   2222111 1222


Q ss_pred             Hhhh-cCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcC
Q 017995           63 SDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN  141 (362)
Q Consensus        63 ~~~~-~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~  141 (362)
                      .... ......+++.++|+.||++|..++++||.+... +..+ ..+++..+||.++.|.+.+..||+|++|+.++++++
T Consensus       105 s~~~~~~~~~~~~~~~~lq~lR~~g~~l~iisN~d~r~-~~~l-~~~~l~~~fD~vv~S~e~g~~KPDp~If~~al~~l~  182 (237)
T KOG3085|consen  105 STFAPSAWKYLDGMQELLQKLRKKGTILGIISNFDDRL-RLLL-LPLGLSAYFDFVVESCEVGLEKPDPRIFQLALERLG  182 (237)
T ss_pred             ccccccCceeccHHHHHHHHHHhCCeEEEEecCCcHHH-HHHh-hccCHHHhhhhhhhhhhhccCCCChHHHHHHHHHhC
Confidence            2221 357788899999999999999999999998886 4556 788999999999999999999999999999999999


Q ss_pred             CCCCcEEEEecCH-hhHHHHHHcCCEEEEEcC
Q 017995          142 MEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPS  172 (362)
Q Consensus       142 ~~p~~~l~igDs~-~d~~aA~~aG~~~i~v~~  172 (362)
                      +.|++|++|||.. +|+++|+++||..+.|..
T Consensus       183 v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~  214 (237)
T KOG3085|consen  183 VKPEECVHIGDLLENDYEGARNLGWHAILVDN  214 (237)
T ss_pred             CChHHeEEecCccccccHhHHHcCCEEEEEcc
Confidence            9999999999999 899999999999999975

>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA

Probab=99.61  E-value=5.1e-15  Score=122.38  Aligned_cols=100  Identities=23%  Similarity=0.418  Sum_probs=87.3

Q ss_pred             CCCCCchHHHHHHHHHHCCCcEEEEcCCC--------hHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHH
Q 017995           68 KVKALPGANRLIKHLSCHGVPMALASNSH--------RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKR  139 (362)
Q Consensus        68 ~~~~~pgv~~~L~~L~~~g~~~~i~S~~~--------~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~  139 (362)
                      ...++||+.++|+.|+++|++++++||++        .+.++..+ +++++..  +.++.+.  ...||+|+.|..++++
T Consensus        23 ~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l-~~~~l~~--~~~~~~~--~~~KP~~~~~~~~~~~   97 (132)
T TIGR01662        23 ERILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRL-EELGVPI--DVLYACP--HCRKPKPGMFLEALKR   97 (132)
T ss_pred             HheeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHH-HHCCCCE--EEEEECC--CCCCCChHHHHHHHHH
Confidence            46889999999999999999999999999        77888888 8888853  3333333  5679999999999999


Q ss_pred             c-CCCCCcEEEEec-CHhhHHHHHHcCCEEEEEcC
Q 017995          140 L-NMEPSSSLVIED-SVIGVVAGKAAGMEVVAVPS  172 (362)
Q Consensus       140 ~-~~~p~~~l~igD-s~~d~~aA~~aG~~~i~v~~  172 (362)
                      + +++|++|+|||| +..|+.+|+++|+.+|++.+
T Consensus        98 ~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~~  132 (132)
T TIGR01662        98 FNEIDPEESVYVGDQDLTDLQAAKRAGLAFILVAP  132 (132)
T ss_pred             cCCCChhheEEEcCCCcccHHHHHHCCCeEEEeeC
Confidence            9 599999999999 78999999999999999863

In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.

>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase

Probab=99.55  E-value=2.3e-14  Score=123.19  Aligned_cols=96  Identities=16%  Similarity=0.194  Sum_probs=84.0

Q ss_pred             CCchHHHHHHHHHHCCCcEEEEcCCChH------------hHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHH
Q 017995           71 ALPGANRLIKHLSCHGVPMALASNSHRA------------TIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAK  138 (362)
Q Consensus        71 ~~pgv~~~L~~L~~~g~~~~i~S~~~~~------------~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~  138 (362)
                      ++||+.++|+.|+++|++++|+||++..            .++..+ +.+|+..  +.++++++....||+|+.+..+++
T Consensus        43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l-~~~gl~~--~~ii~~~~~~~~KP~p~~~~~~~~  119 (166)
T TIGR01664        43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFL-EKLKVPI--QVLAATHAGLYRKPMTGMWEYLQS  119 (166)
T ss_pred             ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHH-HHcCCCE--EEEEecCCCCCCCCccHHHHHHHH
Confidence            7899999999999999999999998764            456667 8888843  567777776678999999999999


Q ss_pred             HcC--CCCCcEEEEecCH--------hhHHHHHHcCCEEEE
Q 017995          139 RLN--MEPSSSLVIEDSV--------IGVVAGKAAGMEVVA  169 (362)
Q Consensus       139 ~~~--~~p~~~l~igDs~--------~d~~aA~~aG~~~i~  169 (362)
                      +++  ++|++|+||||+.        .|+++|+++|+.++.
T Consensus       120 ~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~~~  160 (166)
T TIGR01664       120 QYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEFKY  160 (166)
T ss_pred             HcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCcCC
Confidence            999  9999999999996        699999999999864

The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.

>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668

Probab=99.53  E-value=7.4e-14  Score=120.64  Aligned_cols=102  Identities=19%  Similarity=0.234  Sum_probs=86.6

Q ss_pred             CCCCCchHHHHHHHHHHCCCcEEEEcCCC-hHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCc
Q 017995           68 KVKALPGANRLIKHLSCHGVPMALASNSH-RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS  146 (362)
Q Consensus        68 ~~~~~pgv~~~L~~L~~~g~~~~i~S~~~-~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~  146 (362)
                      ...++||+.++|+.|+++|++++|+||++ ...+...+ +.+++..+         ....||+|++|..++++++++|++
T Consensus        41 ~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~-~~~gl~~~---------~~~~KP~p~~~~~~l~~~~~~~~~  110 (170)
T TIGR01668        41 HNEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVE-KALGIPVL---------PHAVKPPGCAFRRAHPEMGLTSEQ  110 (170)
T ss_pred             CCCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHH-HHcCCEEE---------cCCCCCChHHHHHHHHHcCCCHHH
Confidence            45899999999999999999999999998 56666555 66765321         134699999999999999999999


Q ss_pred             EEEEecCH-hhHHHHHHcCCEEEEEcCCCCcccc
Q 017995          147 SLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHR  179 (362)
Q Consensus       147 ~l~igDs~-~d~~aA~~aG~~~i~v~~~~~~~~~  179 (362)
                      |+||||+. .|+.+|+++|+.+++|.++....+.
T Consensus       111 ~l~IGDs~~~Di~aA~~aGi~~i~v~~g~~~~~~  144 (170)
T TIGR01668       111 VAVVGDRLFTDVMGGNRNGSYTILVEPLVHPDQW  144 (170)
T ss_pred             EEEECCcchHHHHHHHHcCCeEEEEccCcCCccc
Confidence            99999998 7999999999999999887644443

This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.

>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional

Probab=99.51  E-value=1.3e-13  Score=131.23  Aligned_cols=107  Identities=19%  Similarity=0.237  Sum_probs=91.3

Q ss_pred             HhhhcCCCCCchHHHHHHHHHHCCCcEEEEcCC---------------ChHhHHHHHHhhcCCcCCCcEEEe-----CCC
Q 017995           63 SDHLCKVKALPGANRLIKHLSCHGVPMALASNS---------------HRATIESKISYQHGWNESFSVIVG-----SDE  122 (362)
Q Consensus        63 ~~~~~~~~~~pgv~~~L~~L~~~g~~~~i~S~~---------------~~~~i~~~L~~~~gl~~~f~~iv~-----~~d  122 (362)
                      .......+++||+.++|+.|+++|++++|+||+               +...+...+ +.+++.  |+.++.     +++
T Consensus        23 ~~~~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL-~~~gl~--fd~i~i~~~~~sd~   99 (354)
T PRK05446         23 VDSLDKLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIF-ESQGIK--FDEVLICPHFPEDN   99 (354)
T ss_pred             ccCcccceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHH-HHcCCc--eeeEEEeCCcCccc
Confidence            334457899999999999999999999999995               344555566 677773  666643     367


Q ss_pred             CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEEEcC
Q 017995          123 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS  172 (362)
Q Consensus       123 ~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~~  172 (362)
                      +.++||+|+++..++++++++|++|+||||+.+|+++|+++|+++++++.
T Consensus       100 ~~~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I~v~~  149 (354)
T PRK05446        100 CSCRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGIRYAR  149 (354)
T ss_pred             CCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEC
Confidence            77899999999999999999999999999999999999999999999966

>smart00577 CPDc catalytic domain of ctd-like phosphatases

Probab=99.50  E-value=2.7e-14  Score=120.52  Aligned_cols=96  Identities=16%  Similarity=0.075  Sum_probs=87.7

Q ss_pred             CCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcC-CCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCc
Q 017995           68 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE-SFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS  146 (362)
Q Consensus        68 ~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~-~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~  146 (362)
                      .+.++||+.++|+.|+ ++++++|+|++....++..+ +++++.. +|+.|++++++..+||+   |..++++++.+|++
T Consensus        43 ~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il-~~l~~~~~~f~~i~~~~d~~~~KP~---~~k~l~~l~~~p~~  117 (148)
T smart00577       43 YVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVL-DLLDPKKYFGYRRLFRDECVFVKGK---YVKDLSLLGRDLSN  117 (148)
T ss_pred             EEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHH-HHhCcCCCEeeeEEECccccccCCe---EeecHHHcCCChhc
Confidence            4678999999999999 57999999999999999988 8888865 56999999999999997   89999999999999


Q ss_pred             EEEEecCHhhHHHHHHcCCEEE
Q 017995          147 SLVIEDSVIGVVAGKAAGMEVV  168 (362)
Q Consensus       147 ~l~igDs~~d~~aA~~aG~~~i  168 (362)
                      |+||||+..|+++|+++|+.+-
T Consensus       118 ~i~i~Ds~~~~~aa~~ngI~i~  139 (148)
T smart00577      118 VIIIDDSPDSWPFHPENLIPIK  139 (148)
T ss_pred             EEEEECCHHHhhcCccCEEEec
Confidence            9999999999999999988764

>PHA02530 pseT polynucleotide kinase; Provisional

Probab=99.48  E-value=1.6e-13  Score=129.28  Aligned_cols=104  Identities=17%  Similarity=0.109  Sum_probs=95.8

Q ss_pred             CCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcC-CCcEEEeCC-------CCCCCCCCHHHHHHHHHHc
Q 017995           69 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE-SFSVIVGSD-------EVRTGKPSPDIFLEAAKRL  140 (362)
Q Consensus        69 ~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~-~f~~iv~~~-------d~~~gKp~p~~~~~~~~~~  140 (362)
                      ..++||+.++|+.|+++|++++++|+.+....+..+ +.+++.+ +|+.+++.+       +...+||+|+++..+++++
T Consensus       186 ~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l-~~l~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~  264 (300)
T PHA02530        186 DKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTV-EWLRQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEK  264 (300)
T ss_pred             CCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHH-HHHHHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHH
Confidence            468999999999999999999999999999988888 8889987 999999988       4556899999999999999


Q ss_pred             CC-CCCcEEEEecCHhhHHHHHHcCCEEEEEcCC
Q 017995          141 NM-EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL  173 (362)
Q Consensus       141 ~~-~p~~~l~igDs~~d~~aA~~aG~~~i~v~~~  173 (362)
                      +. ++++|+||||+.+|+++|+++|+.+++|.++
T Consensus       265 ~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v~~g  298 (300)
T PHA02530        265 IAPKYDVLLAVDDRDQVVDMWRRIGLECWQVAPG  298 (300)
T ss_pred             hccCceEEEEEcCcHHHHHHHHHhCCeEEEecCC
Confidence            88 6799999999999999999999999999774

>TIGR00338 serB phosphoserine phosphatase SerB

Probab=99.46  E-value=9e-13  Score=118.34  Aligned_cols=102  Identities=18%  Similarity=0.216  Sum_probs=87.2

Q ss_pred             cCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEE-------eCC---CCCCCCCCHHHHHHH
Q 017995           67 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIV-------GSD---EVRTGKPSPDIFLEA  136 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv-------~~~---d~~~gKp~p~~~~~~  136 (362)
                      ...+++||+.++|+.|+++|++++|+|++....++..+ +.+|+..+|...+       ++.   +...++|+|..+..+
T Consensus        82 ~~~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~  160 (219)
T TIGR00338        82 ENLPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVK-DKLGLDAAFANRLEVEDGKLTGLVEGPIVDASYKGKTLLIL  160 (219)
T ss_pred             hcCCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHH-HHcCCCceEeeEEEEECCEEEEEecCcccCCcccHHHHHHH
Confidence            45789999999999999999999999999999999888 8889988775322       221   223457789999999


Q ss_pred             HHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEE
Q 017995          137 AKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA  169 (362)
Q Consensus       137 ~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~  169 (362)
                      +++++++|++|++|||+.+|+.+|+++|+.+.+
T Consensus       161 ~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~  193 (219)
T TIGR00338       161 LRKEGISPENTVAVGDGANDLSMIKAAGLGIAF  193 (219)
T ss_pred             HHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEe
Confidence            999999999999999999999999999998643

Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.

>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal

Probab=99.45  E-value=6.3e-13  Score=117.39  Aligned_cols=106  Identities=14%  Similarity=0.086  Sum_probs=90.7

Q ss_pred             hcCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCC----------HHHHHH
Q 017995           66 LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPS----------PDIFLE  135 (362)
Q Consensus        66 ~~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~----------p~~~~~  135 (362)
                      ..+++++||+.++|+.|+++|++++|+|++...+++..+ +.+|+..+|..++..++.+..+|+          ++.+..
T Consensus        76 ~~~~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l-~~~g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~  154 (201)
T TIGR01491        76 FKEISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVA-EKLNPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVER  154 (201)
T ss_pred             HHhCCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH-HHhCCCeEEEEEEEEcCCCeEecceeeEEccccHHHHHHH
Confidence            345789999999999999999999999999999999988 888998888776666555443443          257888


Q ss_pred             HHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEEEcC
Q 017995          136 AAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS  172 (362)
Q Consensus       136 ~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~~  172 (362)
                      +++++++++++|+||||+.+|+.+|+.+|+.++..+.
T Consensus       155 ~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~  191 (201)
T TIGR01491       155 LKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDE  191 (201)
T ss_pred             HHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCC
Confidence            8899999999999999999999999999998877654

This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.

>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672

Probab=99.42  E-value=2.8e-12  Score=115.99  Aligned_cols=110  Identities=13%  Similarity=0.047  Sum_probs=91.1

Q ss_pred             HHHHHHHhhh-cCCCCCchHHHHHHHHHHCCCcEEEEcCC----ChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHH
Q 017995           57 EVYSMFSDHL-CKVKALPGANRLIKHLSCHGVPMALASNS----HRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPD  131 (362)
Q Consensus        57 ~~~~~~~~~~-~~~~~~pgv~~~L~~L~~~g~~~~i~S~~----~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~  131 (362)
                      .+.+.|.... ....+.+++.++|+.|+++|++++++||.    .+..++..+ +.+|+.++|+.++++++....||++.
T Consensus       100 ~~w~~~~~~~~~~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll-~~lGi~~~f~~i~~~d~~~~~Kp~~~  178 (237)
T TIGR01672       100 VFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLA-KNFHIPAMNPVIFAGDKPGQYQYTKT  178 (237)
T ss_pred             HHHHHHHHhcccCCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHH-HHhCCchheeEEECCCCCCCCCCCHH
Confidence            4444555444 35677888999999999999999999998    667777776 88999999999999998888888876


Q ss_pred             HHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEEEcCCC
Q 017995          132 IFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP  174 (362)
Q Consensus       132 ~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~~~~  174 (362)
                      .   +++++++    |+||||+.+|+.+|+++|++++.|.++.
T Consensus       179 ~---~l~~~~i----~i~vGDs~~DI~aAk~AGi~~I~V~~g~  214 (237)
T TIGR01672       179 Q---WIQDKNI----RIHYGDSDNDITAAKEAGARGIRILRAS  214 (237)
T ss_pred             H---HHHhCCC----eEEEeCCHHHHHHHHHCCCCEEEEEecC
Confidence            3   4456665    8999999999999999999999998754

Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.

>PLN02954 phosphoserine phosphatase

Probab=99.41  E-value=6.7e-12  Score=113.07  Aligned_cols=174  Identities=16%  Similarity=0.127  Sum_probs=114.4

Q ss_pred             HHHHHHHHHcCCCCC-HHHHHhhcC--CCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhcCCCCCchHHHHHHHHHH
Q 017995            8 EVLKTFLVKYGKEWD-GREKHKIVG--KTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSC   84 (362)
Q Consensus         8 ~a~~~~l~~~g~~~~-~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~~~L~~L~~   84 (362)
                      +.+..+++.+|.+.. .+....+.+  .+..+.+........  ...+.+    ...+..  ....++||+.++|+.|++
T Consensus        27 ~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~----~~~~~~--~~~~l~pg~~e~l~~l~~   98 (224)
T PLN02954         27 EGIDELAEFCGAGEAVAEWTAKAMGGSVPFEEALAARLSLFK--PSLSQV----EEFLEK--RPPRLSPGIPELVKKLRA   98 (224)
T ss_pred             HHHHHHHHHcCChHHHHHHHHHHHCCCCCHHHHHHHHHHHcC--CCHHHH----HHHHHH--ccCCCCccHHHHHHHHHH
Confidence            566888888987533 333455555  445554544333322  122222    222222  135789999999999999


Q ss_pred             CCCcEEEEcCCChHhHHHHHHhhcCCc--CCCcEE--------EeCCC----CCCCCCCHHHHHHHHHHcCCCCCcEEEE
Q 017995           85 HGVPMALASNSHRATIESKISYQHGWN--ESFSVI--------VGSDE----VRTGKPSPDIFLEAAKRLNMEPSSSLVI  150 (362)
Q Consensus        85 ~g~~~~i~S~~~~~~i~~~L~~~~gl~--~~f~~i--------v~~~d----~~~gKp~p~~~~~~~~~~~~~p~~~l~i  150 (362)
                      +|++++|+|++.+..++..+ +.+|+.  .+|...        +.+.+    ...++++|+.+..++++++.  ++|+||
T Consensus        99 ~g~~~~IvS~~~~~~i~~~l-~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~~~~~~~~~--~~~i~i  175 (224)
T PLN02954         99 RGTDVYLVSGGFRQMIAPVA-AILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQHIKKKHGY--KTMVMI  175 (224)
T ss_pred             CCCEEEEECCCcHHHHHHHH-HHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHHHHHHHcCC--CceEEE
Confidence            99999999999999999988 888986  355421        12221    12356788999999888875  689999


Q ss_pred             ecCHhhHHHHHHcCCEEEEEcCCCCccc-cccchhHhhccccc
Q 017995          151 EDSVIGVVAGKAAGMEVVAVPSLPKQTH-RYTAADEVINSLLD  192 (362)
Q Consensus       151 gDs~~d~~aA~~aG~~~i~v~~~~~~~~-~~ssa~~vi~~l~e  192 (362)
                      ||+.+|+.+|+++|+.+++...+..... ....++.++.++.+
T Consensus       176 GDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~e  218 (224)
T PLN02954        176 GDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTDFQD  218 (224)
T ss_pred             eCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECCHHH
Confidence            9999999999999988766543221111 11234556665554

>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC

Probab=99.37  E-value=1.3e-12  Score=107.53  Aligned_cols=88  Identities=19%  Similarity=0.166  Sum_probs=79.0

Q ss_pred             CCCchHHHHHHHHHHCCCcEEEEcCC-ChHhHHHHHHhhcC-------CcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcC
Q 017995           70 KALPGANRLIKHLSCHGVPMALASNS-HRATIESKISYQHG-------WNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN  141 (362)
Q Consensus        70 ~~~pgv~~~L~~L~~~g~~~~i~S~~-~~~~i~~~L~~~~g-------l~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~  141 (362)
                      +++||+.++|+.|+++|++++++||+ ....+...+ +..+       +.++|+.++++++    +|+|+.|..+++++|
T Consensus        29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l-~~~~~~~~i~~l~~~f~~~~~~~~----~pkp~~~~~a~~~lg  103 (128)
T TIGR01681        29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELL-KIFEDFGIIFPLAEYFDPLTIGYW----LPKSPRLVEIALKLN  103 (128)
T ss_pred             HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHH-HhccccccchhhHhhhhhhhhcCC----CcHHHHHHHHHHHhc
Confidence            68999999999999999999999999 888888777 7777       7899999988864    588999999999999


Q ss_pred             --CCCCcEEEEecCHhhHHHHHH
Q 017995          142 --MEPSSSLVIEDSVIGVVAGKA  162 (362)
Q Consensus       142 --~~p~~~l~igDs~~d~~aA~~  162 (362)
                        ++|++|+||||+..++...++
T Consensus       104 ~~~~p~~~l~igDs~~n~~~~~~  126 (128)
T TIGR01681       104 GVLKPKSILFVDDRPDNNEEVDY  126 (128)
T ss_pred             CCCCcceEEEECCCHhHHHHHHh
Confidence              999999999999999876554

No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.

>cd01427 HAD_like Haloacid dehalogenase-like hydrolases

Probab=99.37  E-value=4.8e-12  Score=103.58  Aligned_cols=103  Identities=31%  Similarity=0.466  Sum_probs=94.4

Q ss_pred             cCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCC----------------CCCH
Q 017995           67 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTG----------------KPSP  130 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~g----------------Kp~p  130 (362)
                      ....++|++.++|+.|+++|++++++|++...+++..+ +.+++..+|+.++++++....                ||++
T Consensus        21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   99 (139)
T cd01427          21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELL-EELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNP   99 (139)
T ss_pred             ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHH-HHcCCchhhhheeccchhhhhcccccccccccccccCCCCH
Confidence            45789999999999999999999999999999999888 888998888989887766544                9999


Q ss_pred             HHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEEE
Q 017995          131 DIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV  170 (362)
Q Consensus       131 ~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v  170 (362)
                      ..+..++++++.+++++++|||+.+|+.+|+++|+.+++|
T Consensus       100 ~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~v  139 (139)
T cd01427         100 DKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV  139 (139)
T ss_pred             HHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceeeC
Confidence            9999999999999999999999999999999999998864

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.

>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed

Probab=99.33  E-value=2.2e-11  Score=109.57  Aligned_cols=100  Identities=13%  Similarity=0.129  Sum_probs=83.8

Q ss_pred             cCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcC--CC--cEEEeCCCCCCCCCCHHH----------
Q 017995           67 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE--SF--SVIVGSDEVRTGKPSPDI----------  132 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~--~f--~~iv~~~d~~~gKp~p~~----------  132 (362)
                      ...+++||+.++|+.|+++|++++|+|++...+++..| +++ +..  .+  +..+.+++....||+|..          
T Consensus        71 ~~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il-~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~  148 (219)
T PRK09552         71 ETAEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLL-QGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCC  148 (219)
T ss_pred             hCCCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHH-HHh-CCcCcEEEeEEEecCCeeEEeccCCccccccccCCCc
Confidence            45789999999999999999999999999999999988 666 543  22  344566777777888764          


Q ss_pred             HHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 017995          133 FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV  168 (362)
Q Consensus       133 ~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i  168 (362)
                      ...++++++..+.+|+||||+.+|+.+|+++|+.+.
T Consensus       149 K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a  184 (219)
T PRK09552        149 KPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFA  184 (219)
T ss_pred             hHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCccee
Confidence            357888999999999999999999999999999433

>PRK11133 serB phosphoserine phosphatase; Provisional

Probab=99.32  E-value=2.1e-11  Score=115.48  Aligned_cols=102  Identities=16%  Similarity=0.203  Sum_probs=86.2

Q ss_pred             cCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCc-------EEEeCC---CCCCCCCCHHHHHHH
Q 017995           67 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS-------VIVGSD---EVRTGKPSPDIFLEA  136 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~-------~iv~~~---d~~~gKp~p~~~~~~  136 (362)
                      ..++++||+.++|+.|++.|++++|+|++...+++..+ +++++...+.       ..+++.   +...+||+++.+..+
T Consensus       178 ~~l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~-~~Lgld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~l  256 (322)
T PRK11133        178 ENLPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLR-DKLRLDAAVANELEIMDGKLTGNVLGDIVDAQYKADTLTRL  256 (322)
T ss_pred             HhCCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHH-HHcCCCeEEEeEEEEECCEEEeEecCccCCcccHHHHHHHH
Confidence            45789999999999999999999999999998888767 7888854332       112221   334578999999999


Q ss_pred             HHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEE
Q 017995          137 AKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA  169 (362)
Q Consensus       137 ~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~  169 (362)
                      ++++|+++++|++|||+.+|+.+++.+|+.+.+
T Consensus       257 a~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~  289 (322)
T PRK11133        257 AQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY  289 (322)
T ss_pred             HHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe
Confidence            999999999999999999999999999998876

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=99.31  E-value=6.7e-13  Score=123.81  Aligned_cols=105  Identities=24%  Similarity=0.322  Sum_probs=84.3

Q ss_pred             CCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEE---eCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 017995           71 ALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIV---GSDEVRTGKPSPDIFLEAAKRLNMEPSSS  147 (362)
Q Consensus        71 ~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv---~~~d~~~gKp~p~~~~~~~~~~~~~p~~~  147 (362)
                      -++|+.++++.|+++|. +.|+||.+............++..+|+.+.   +++....+||+|.+|..++++++++|++|
T Consensus       144 ~y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~~~~~~~~~g~~~~~i~~~~g~~~~~~gKP~p~~~~~~~~~~~~~~~~~  222 (279)
T TIGR01452       144 SYAKLREACAHLREPGC-LFVATNRDPWHPLSDGSRTPGTGSLVAAIETASGRQPLVVGKPSPYMFECITENFSIDPART  222 (279)
T ss_pred             CHHHHHHHHHHHhcCCC-EEEEeCCCCCCCCcCCCcccChHHHHHHHHHHhCCceeccCCCCHHHHHHHHHHhCCChhhE
Confidence            48899999999998887 899999887543211113446656666554   34555679999999999999999999999


Q ss_pred             EEEecCH-hhHHHHHHcCCEEEEEcCCCCc
Q 017995          148 LVIEDSV-IGVVAGKAAGMEVVAVPSLPKQ  176 (362)
Q Consensus       148 l~igDs~-~d~~aA~~aG~~~i~v~~~~~~  176 (362)
                      +||||+. +|+++|+++|+.++.|.++...
T Consensus       223 lmIGD~~~tDI~~A~~aGi~si~V~~G~~~  252 (279)
T TIGR01452       223 LMVGDRLETDILFGHRCGMTTVLVLSGVSR  252 (279)
T ss_pred             EEECCChHHHHHHHHHcCCcEEEECCCCCC
Confidence            9999996 9999999999999999886543

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional

Probab=99.31  E-value=3.7e-11  Score=108.66  Aligned_cols=109  Identities=14%  Similarity=0.122  Sum_probs=86.1

Q ss_pred             HHHHHHHhhh-cCCCCCchHHHHHHHHHHCCCcEEEEcCCC----hHhHHHHHHhhcCC--cCCCcEEEeCCCCCCCCCC
Q 017995           57 EVYSMFSDHL-CKVKALPGANRLIKHLSCHGVPMALASNSH----RATIESKISYQHGW--NESFSVIVGSDEVRTGKPS  129 (362)
Q Consensus        57 ~~~~~~~~~~-~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~----~~~i~~~L~~~~gl--~~~f~~iv~~~d~~~gKp~  129 (362)
                      .+.+.|.+.. ....|+||+.++|+.|+++|++++++||.+    +..++.++ +.+|+  .++|+.++++++.  .||+
T Consensus       100 ~fw~~y~~~~~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Ll-k~~gip~~~~f~vil~gd~~--~K~~  176 (237)
T PRK11009        100 KFWEKMNNGWDEFSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLA-DDFHIPADNMNPVIFAGDKP--GQYT  176 (237)
T ss_pred             HHHHHHHhcccccCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHH-HHcCCCcccceeEEEcCCCC--CCCC
Confidence            3344444443 468899999999999999999999999953    45555555 67899  8899988888864  6777


Q ss_pred             HHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEEEcCCCC
Q 017995          130 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPK  175 (362)
Q Consensus       130 p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~~~~~  175 (362)
                      +..   +++++++    ++||||+..|+.+|+++|++++.|.++..
T Consensus       177 K~~---~l~~~~i----~I~IGDs~~Di~aA~~AGi~~I~v~~G~~  215 (237)
T PRK11009        177 KTQ---WLKKKNI----RIFYGDSDNDITAAREAGARGIRILRAAN  215 (237)
T ss_pred             HHH---HHHhcCC----eEEEcCCHHHHHHHHHcCCcEEEEecCCC
Confidence            754   4455665    99999999999999999999999988643

>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]

Probab=99.30  E-value=1.8e-11  Score=102.02  Aligned_cols=101  Identities=24%  Similarity=0.374  Sum_probs=90.0

Q ss_pred             cCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCc
Q 017995           67 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS  146 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~  146 (362)
                      .....-|.+.+.+..++++|+++.|+||+.+.-+.... .++|+    +.|.     +.+||.+..|..|+++++++|++
T Consensus        43 d~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~-~~l~v----~fi~-----~A~KP~~~~fr~Al~~m~l~~~~  112 (175)
T COG2179          43 DNPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAA-EKLGV----PFIY-----RAKKPFGRAFRRALKEMNLPPEE  112 (175)
T ss_pred             cCCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhh-hhcCC----ceee-----cccCccHHHHHHHHHHcCCChhH
Confidence            45677889999999999999999999999999888877 88887    5553     46799999999999999999999


Q ss_pred             EEEEecCH-hhHHHHHHcCCEEEEEcCCCCcc
Q 017995          147 SLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQT  177 (362)
Q Consensus       147 ~l~igDs~-~d~~aA~~aG~~~i~v~~~~~~~  177 (362)
                      |+||||.. +|+.+|+.+||.+|.|.+....+
T Consensus       113 vvmVGDqL~TDVlggnr~G~~tIlV~Pl~~~d  144 (175)
T COG2179         113 VVMVGDQLFTDVLGGNRAGMRTILVEPLVAPD  144 (175)
T ss_pred             EEEEcchhhhhhhcccccCcEEEEEEEecccc
Confidence            99999999 99999999999999998854433

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=99.27  E-value=1.6e-12  Score=119.74  Aligned_cols=121  Identities=20%  Similarity=0.221  Sum_probs=96.5

Q ss_pred             CCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCC---CCCCCHHHHHHHHHHcCCCCCcE
Q 017995           71 ALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR---TGKPSPDIFLEAAKRLNMEPSSS  147 (362)
Q Consensus        71 ~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~---~gKp~p~~~~~~~~~~~~~p~~~  147 (362)
                      .++++.++++.|++.++++.++||.+..+....+ ..+|+..+|+.+.++....   .+||+|++|..++++++++|++|
T Consensus       121 ~y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~-~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~  199 (257)
T TIGR01458       121 SYQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDG-LALDVGPFVTALEYATDTKATVVGKPSKTFFLEALRATGCEPEEA  199 (257)
T ss_pred             CHHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCC-CCCCchHHHHHHHHHhCCCceeecCCCHHHHHHHHHHhCCChhhE
Confidence            4679999999999999999999999988776555 6678888888776654433   48999999999999999999999


Q ss_pred             EEEecCH-hhHHHHHHcCCEEEEEcCCCCccc---c-ccchhHhhccccc
Q 017995          148 LVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTH---R-YTAADEVINSLLD  192 (362)
Q Consensus       148 l~igDs~-~d~~aA~~aG~~~i~v~~~~~~~~---~-~ssa~~vi~~l~e  192 (362)
                      +||||+. +|+.+|+++|+.+++|.++.....   . ...++.+++++.+
T Consensus       200 ~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~e  249 (257)
T TIGR01458       200 VMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPH  249 (257)
T ss_pred             EEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEECCHHH
Confidence            9999996 999999999999999987632111   1 1234556665554

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=99.24  E-value=2.3e-10  Score=99.84  Aligned_cols=97  Identities=16%  Similarity=0.199  Sum_probs=81.7

Q ss_pred             cCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCC--------------------CCCC
Q 017995           67 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDE--------------------VRTG  126 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d--------------------~~~g  126 (362)
                      ...+++||+.++|+.|+++|++++|+|++....++..+ +++++.++|+.|++++.                    ...+
T Consensus        69 ~~~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l-~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g  147 (188)
T TIGR01489        69 KSAPIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVL-EGIGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCG  147 (188)
T ss_pred             HhCCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHH-HHcCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCC
Confidence            34799999999999999999999999999999999888 88999999999987543                    2234


Q ss_pred             CCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEE
Q 017995          127 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV  167 (362)
Q Consensus       127 Kp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~  167 (362)
                      .++++.+..+.+..   +++|++|||+.+|+.+|+++++-+
T Consensus       148 ~~K~~~~~~~~~~~---~~~~i~iGD~~~D~~aa~~~d~~~  185 (188)
T TIGR01489       148 CCKGKVIHKLSEPK---YQHIIYIGDGVTDVCPAKLSDVVF  185 (188)
T ss_pred             CCHHHHHHHHHhhc---CceEEEECCCcchhchHhcCCccc
Confidence            45577888776654   899999999999999999986543

Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.

>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B

Probab=99.23  E-value=1.5e-11  Score=91.33  Aligned_cols=68  Identities=32%  Similarity=0.510  Sum_probs=57.7

Q ss_pred             CCCCCHHHHHHHHHHcCCCCCcEEEEecC-HhhHHHHHHcCCEEEEEcCCCCccccc----cchhHhhccccc
Q 017995          125 TGKPSPDIFLEAAKRLNMEPSSSLVIEDS-VIGVVAGKAAGMEVVAVPSLPKQTHRY----TAADEVINSLLD  192 (362)
Q Consensus       125 ~gKp~p~~~~~~~~~~~~~p~~~l~igDs-~~d~~aA~~aG~~~i~v~~~~~~~~~~----ssa~~vi~~l~e  192 (362)
                      ++||+|.+|..++++++++|++|+||||+ .+|+.+|+++|+.++.|.++....+..    ..++.++.+|.|
T Consensus         2 ~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e   74 (75)
T PF13242_consen    2 CGKPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLKE   74 (75)
T ss_dssp             CSTTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESSGGG
T ss_pred             CCCCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECCHHh
Confidence            68999999999999999999999999999 799999999999999999965443321    356677777655

...

>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase

Probab=99.22  E-value=2.3e-10  Score=102.55  Aligned_cols=97  Identities=16%  Similarity=0.185  Sum_probs=81.3

Q ss_pred             CCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCC---cEEEeCCCCCCCCCCHHHH----------H
Q 017995           68 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF---SVIVGSDEVRTGKPSPDIF----------L  134 (362)
Q Consensus        68 ~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f---~~iv~~~d~~~gKp~p~~~----------~  134 (362)
                      ..+++||+.++|+.|+++|++++|+|++...+++.++ +.++....+   +.++.++.+...||+|..+          .
T Consensus        68 ~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il-~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~  146 (214)
T TIGR03333        68 TAEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLL-EGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKP  146 (214)
T ss_pred             cCcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHH-HhhCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHH
Confidence            4789999999999999999999999999999999888 665444444   3455566667778887765          4


Q ss_pred             HHHHHcCCCCCcEEEEecCHhhHHHHHHcCC
Q 017995          135 EAAKRLNMEPSSSLVIEDSVIGVVAGKAAGM  165 (362)
Q Consensus       135 ~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~  165 (362)
                      .++++++..+++|+||||+.+|+.+|+.+|+
T Consensus       147 ~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~  177 (214)
T TIGR03333       147 SLIRKLSEPNDYHIVIGDSVTDVEAAKQSDL  177 (214)
T ss_pred             HHHHHHhhcCCcEEEEeCCHHHHHHHHhCCe
Confidence            6777788889999999999999999999998

Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=99.22  E-value=9.7e-12  Score=113.61  Aligned_cols=98  Identities=23%  Similarity=0.384  Sum_probs=84.5

Q ss_pred             CchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEE--EeCCCCCCCCCCHHHHHHHHHHcCCC-CCcEE
Q 017995           72 LPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVI--VGSDEVRTGKPSPDIFLEAAKRLNME-PSSSL  148 (362)
Q Consensus        72 ~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~i--v~~~d~~~gKp~p~~~~~~~~~~~~~-p~~~l  148 (362)
                      +|++.++++.|.++|+++ |+||.+..+....+ ..++...+|..+  ++++....+||+|.+|..++++++.. +++|+
T Consensus       140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~-~~~~~g~~~~~i~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~  217 (242)
T TIGR01459       140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGI-YRYGAGYYAELIKQLGGKVIYSGKPYPAIFHKALKECSNIPKNRML  217 (242)
T ss_pred             HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCc-eEecccHHHHHHHHhCCcEecCCCCCHHHHHHHHHHcCCCCcccEE
Confidence            689999999999999997 88999988876555 667777777755  66766678999999999999999975 67999


Q ss_pred             EEecC-HhhHHHHHHcCCEEEEEc
Q 017995          149 VIEDS-VIGVVAGKAAGMEVVAVP  171 (362)
Q Consensus       149 ~igDs-~~d~~aA~~aG~~~i~v~  171 (362)
                      ||||+ .+|+.+|+++|+.+++|.
T Consensus       218 ~vGD~~~~Di~~a~~~G~~~i~v~  241 (242)
T TIGR01459       218 MVGDSFYTDILGANRLGIDTALVL  241 (242)
T ss_pred             EECCCcHHHHHHHHHCCCeEEEEe
Confidence            99999 599999999999999885

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit

Probab=99.18  E-value=5.7e-11  Score=102.14  Aligned_cols=85  Identities=12%  Similarity=0.198  Sum_probs=76.9

Q ss_pred             HHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhH
Q 017995           78 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV  157 (362)
Q Consensus        78 ~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~  157 (362)
                      .+..|+++|++++|+|+++...++..+ +.+++..+|+.+         ||+|+.+..+++++++++++|++|||+.+|+
T Consensus        42 ~~~~L~~~Gi~laIiT~k~~~~~~~~l-~~lgi~~~f~~~---------kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi  111 (169)
T TIGR02726        42 GVIVLQLCGIDVAIITSKKSGAVRHRA-EELKIKRFHEGI---------KKKTEPYAQMLEEMNISDAEVCYVGDDLVDL  111 (169)
T ss_pred             HHHHHHHCCCEEEEEECCCcHHHHHHH-HHCCCcEEEecC---------CCCHHHHHHHHHHcCcCHHHEEEECCCHHHH
Confidence            468888999999999999999999988 899998777632         7999999999999999999999999999999


Q ss_pred             HHHHHcCCEEEEEcC
Q 017995          158 VAGKAAGMEVVAVPS  172 (362)
Q Consensus       158 ~aA~~aG~~~i~v~~  172 (362)
                      .+++.+|+.++.-..
T Consensus       112 ~~~~~ag~~~am~nA  126 (169)
T TIGR02726       112 SMMKRVGLAVAVGDA  126 (169)
T ss_pred             HHHHHCCCeEECcCc
Confidence            999999999876543

Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.

>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=99.18  E-value=6.1e-10  Score=96.72  Aligned_cols=152  Identities=20%  Similarity=0.240  Sum_probs=113.9

Q ss_pred             HHHHHH-HHcCCCCCHH-----HHHhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhh--cCCCCCchHHHHHH
Q 017995            9 VLKTFL-VKYGKEWDGR-----EKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHL--CKVKALPGANRLIK   80 (362)
Q Consensus         9 a~~~~l-~~~g~~~~~~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~pgv~~~L~   80 (362)
                      .+.+.+ .++|++.+..     .+.+.+|.++...    . ..+...+.++..+    ......  +.++|-+-.+.+|-
T Consensus        40 nI~~f~~eklgi~~e~a~~L~~~~yk~YG~t~aGL----~-~~~~~~d~deY~~----~V~~~LPlq~LkPD~~LRnlLL  110 (244)
T KOG3109|consen   40 NIQEFFVEKLGISEEEAEELRESLYKEYGLTMAGL----K-AVGYIFDADEYHR----FVHGRLPLQDLKPDPVLRNLLL  110 (244)
T ss_pred             HHHHHHHHHhCCChhhhHHHHHHHHHHHhHHHHHH----H-HhcccCCHHHHHH----HhhccCcHhhcCCCHHHHHHHH
Confidence            334444 4578755322     2344555444322    2 2233334444433    333332  45888999999999


Q ss_pred             HHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCC------CCCCCHHHHHHHHHHcCCC-CCcEEEEecC
Q 017995           81 HLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR------TGKPSPDIFLEAAKRLNME-PSSSLVIEDS  153 (362)
Q Consensus        81 ~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~------~gKp~p~~~~~~~~~~~~~-p~~~l~igDs  153 (362)
                      .|+.++  ..+-||+.+..+.+.| +++|+.+.|+.|++.+-..      ..||+++.|..+++..|++ |.+|+++.||
T Consensus       111 ~l~~r~--k~~FTNa~k~HA~r~L-k~LGieDcFegii~~e~~np~~~~~vcKP~~~afE~a~k~agi~~p~~t~FfDDS  187 (244)
T KOG3109|consen  111 SLKKRR--KWIFTNAYKVHAIRIL-KKLGIEDCFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAGIDSPRNTYFFDDS  187 (244)
T ss_pred             hCcccc--EEEecCCcHHHHHHHH-HHhChHHhccceeEeeccCCCCCceeecCCHHHHHHHHHHhCCCCcCceEEEcCc
Confidence            999874  7889999999999999 9999999999999876444      4699999999999999998 9999999999


Q ss_pred             HhhHHHHHHcCCEEEEEcC
Q 017995          154 VIGVVAGKAAGMEVVAVPS  172 (362)
Q Consensus       154 ~~d~~aA~~aG~~~i~v~~  172 (362)
                      ...+++|++.|+.++++..
T Consensus       188 ~~NI~~ak~vGl~tvlv~~  206 (244)
T KOG3109|consen  188 ERNIQTAKEVGLKTVLVGR  206 (244)
T ss_pred             hhhHHHHHhccceeEEEEe
Confidence            9999999999999998865

>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490

Probab=99.15  E-value=6.9e-10  Score=98.23  Aligned_cols=121  Identities=16%  Similarity=0.182  Sum_probs=94.7

Q ss_pred             CHHHHHHHHHHHHHhhhcCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcE-EEeCCC------
Q 017995           50 AKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSV-IVGSDE------  122 (362)
Q Consensus        50 ~~~~~~~~~~~~~~~~~~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~-iv~~~d------  122 (362)
                      +.+++.....+.+.... ...++||+.++|+.++++|++++|+|++++..++..+ +++|+..+|.. +...++      
T Consensus        68 ~~~~l~~~~~~~~~~~~-~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~-~~lg~~~~~~~~l~~~~~g~~~g~  145 (202)
T TIGR01490        68 LEEDVRAIVEEFVNQKI-ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLA-RILGIDNAIGTRLEESEDGIYTGN  145 (202)
T ss_pred             CHHHHHHHHHHHHHHHH-HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH-HHcCCcceEecceEEcCCCEEeCC
Confidence            45566555555554433 3578999999999999999999999999999999888 88899877654 332121      


Q ss_pred             ----CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEEEcC
Q 017995          123 ----VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS  172 (362)
Q Consensus       123 ----~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~~  172 (362)
                          ...+++++..+...+++.++++++|+++|||.+|+.+++.+|..+++.+.
T Consensus       146 ~~~~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~~~  199 (202)
T TIGR01490       146 IDGNNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVNPD  199 (202)
T ss_pred             ccCCCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeCCC
Confidence                12456667778888999999999999999999999999999998876543

A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.

>PRK13582 thrH phosphoserine phosphatase; Provisional

Probab=99.13  E-value=3.4e-10  Score=100.48  Aligned_cols=100  Identities=19%  Similarity=0.201  Sum_probs=79.5

Q ss_pred             cCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCC-CC---CCCCCCHHHHHHHHHHcCC
Q 017995           67 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD-EV---RTGKPSPDIFLEAAKRLNM  142 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~-d~---~~gKp~p~~~~~~~~~~~~  142 (362)
                      ..++++||+.++|+.|+++ ++++|+|++...+++..+ +++|+..+|...+..+ +.   +..++.|.....++++++.
T Consensus        65 ~~~~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l-~~~gl~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~  142 (205)
T PRK13582         65 ATLDPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLM-RQLGWPTLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKS  142 (205)
T ss_pred             HhCCCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHH-HHcCCchhhcceEEECCCCeEECccccccchHHHHHHHHHH
Confidence            5678999999999999999 999999999999999988 8899988886544332 11   1122334445666667777


Q ss_pred             CCCcEEEEecCHhhHHHHHHcCCEEE
Q 017995          143 EPSSSLVIEDSVIGVVAGKAAGMEVV  168 (362)
Q Consensus       143 ~p~~~l~igDs~~d~~aA~~aG~~~i  168 (362)
                      .+.+|+||||+.+|+.+|+.+|+.+.
T Consensus       143 ~~~~~v~iGDs~~D~~~~~aa~~~v~  168 (205)
T PRK13582        143 LGYRVIAAGDSYNDTTMLGEADAGIL  168 (205)
T ss_pred             hCCeEEEEeCCHHHHHHHHhCCCCEE
Confidence            78999999999999999999998664

>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase)

Probab=99.12  E-value=1.7e-10  Score=102.64  Aligned_cols=91  Identities=31%  Similarity=0.436  Sum_probs=80.7

Q ss_pred             CCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 017995           68 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS  147 (362)
Q Consensus        68 ~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~  147 (362)
                      ..+++||+.++|+.|+++|++++++|+.....+.... +.+|+.   +.++.+...  +||++.+|..+++.++.++.+|
T Consensus       125 ~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~-~~lgi~---~~~v~a~~~--~kP~~k~~~~~i~~l~~~~~~v  198 (215)
T PF00702_consen  125 RDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIA-KQLGIF---DSIVFARVI--GKPEPKIFLRIIKELQVKPGEV  198 (215)
T ss_dssp             EEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHH-HHTTSC---SEEEEESHE--TTTHHHHHHHHHHHHTCTGGGE
T ss_pred             cCcchhhhhhhhhhhhccCcceeeeeccccccccccc-cccccc---ccccccccc--ccccchhHHHHHHHHhcCCCEE
Confidence            3578999999999999999999999999999988887 888983   444444433  8999999999999999999999


Q ss_pred             EEEecCHhhHHHHHHcC
Q 017995          148 LVIEDSVIGVVAGKAAG  164 (362)
Q Consensus       148 l~igDs~~d~~aA~~aG  164 (362)
                      +||||+.+|+.++++||
T Consensus       199 ~~vGDg~nD~~al~~Ag  215 (215)
T PF00702_consen  199 AMVGDGVNDAPALKAAG  215 (215)
T ss_dssp             EEEESSGGHHHHHHHSS
T ss_pred             EEEccCHHHHHHHHhCc
Confidence            99999999999999987

This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....

>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Probab=99.12  E-value=2e-10  Score=97.61  Aligned_cols=84  Identities=18%  Similarity=0.240  Sum_probs=75.1

Q ss_pred             HHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhH
Q 017995           78 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV  157 (362)
Q Consensus        78 ~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~  157 (362)
                      +|+.|+++|++++|+||.+...+...+ +++|+..+|+.         .+|+|+.+..+++++++++++|+||||+.+|+
T Consensus        36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l-~~~gi~~~~~~---------~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~  105 (154)
T TIGR01670        36 GIRCALKSGIEVAIITGRKAKLVEDRC-KTLGITHLYQG---------QSNKLIAFSDILEKLALAPENVAYIGDDLIDW  105 (154)
T ss_pred             HHHHHHHCCCEEEEEECCCCHHHHHHH-HHcCCCEEEec---------ccchHHHHHHHHHHcCCCHHHEEEECCCHHHH
Confidence            799999999999999999999998888 88998766542         37889999999999999999999999999999


Q ss_pred             HHHHHcCCEEEEEcC
Q 017995          158 VAGKAAGMEVVAVPS  172 (362)
Q Consensus       158 ~aA~~aG~~~i~v~~  172 (362)
                      .+++.+|+. +.+..
T Consensus       106 ~~~~~ag~~-~~v~~  119 (154)
T TIGR01670       106 PVMEKVGLS-VAVAD  119 (154)
T ss_pred             HHHHHCCCe-EecCC
Confidence            999999998 55544

The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.

>TIGR01686 FkbH FkbH-like domain

Probab=99.11  E-value=2.7e-10  Score=108.32  Aligned_cols=91  Identities=22%  Similarity=0.148  Sum_probs=84.1

Q ss_pred             CCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhh----cCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 017995           70 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQ----HGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS  145 (362)
Q Consensus        70 ~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~----~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~  145 (362)
                      .++||+.++|+.|+++|++++|+|++++..+...| ++    +++.++|+.+.++     .||+|+.+..+++++++.++
T Consensus        31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l-~~~~~~~~~~~~f~~~~~~-----~~pk~~~i~~~~~~l~i~~~  104 (320)
T TIGR01686        31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVF-ERRKDFILQAEDFDARSIN-----WGPKSESLRKIAKKLNLGTD  104 (320)
T ss_pred             ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHH-HhCccccCcHHHeeEEEEe-----cCchHHHHHHHHHHhCCCcC
Confidence            46899999999999999999999999999999989 77    8888899988665     48999999999999999999


Q ss_pred             cEEEEecCHhhHHHHHHcCCE
Q 017995          146 SSLVIEDSVIGVVAGKAAGME  166 (362)
Q Consensus       146 ~~l~igDs~~d~~aA~~aG~~  166 (362)
                      +|+||||++.|+.++++++..
T Consensus       105 ~~vfidD~~~d~~~~~~~lp~  125 (320)
T TIGR01686       105 SFLFIDDNPAERANVKITLPV  125 (320)
T ss_pred             cEEEECCCHHHHHHHHHHCCC
Confidence            999999999999999998765

The C-terminal portion of this domain is unique to this family (by BLAST).

>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase

Probab=99.10  E-value=2.4e-09  Score=101.54  Aligned_cols=104  Identities=19%  Similarity=0.246  Sum_probs=86.1

Q ss_pred             CCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhc-C-------CcCCCcEEEeCCCCC----CC---------
Q 017995           68 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQH-G-------WNESFSVIVGSDEVR----TG---------  126 (362)
Q Consensus        68 ~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~-g-------l~~~f~~iv~~~d~~----~g---------  126 (362)
                      .+.+.||+.++|+.|+++|++++|+||++..+++..+ +.+ |       +.++||.|+++..-.    .+         
T Consensus       182 yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im-~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~~  260 (343)
T TIGR02244       182 YVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGM-KYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDVE  260 (343)
T ss_pred             HhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeCC
Confidence            3677999999999999999999999999999999888 664 6       899999999875311    00         


Q ss_pred             ----CCCH------------HHHHHHHHHcCCCCCcEEEEecCH-hhHHHHH-HcCCEEEEEcC
Q 017995          127 ----KPSP------------DIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGK-AAGMEVVAVPS  172 (362)
Q Consensus       127 ----Kp~p------------~~~~~~~~~~~~~p~~~l~igDs~-~d~~aA~-~aG~~~i~v~~  172 (362)
                          ++..            +......+.+++++++|+||||.. .|+.+|+ .+|++++.|.+
T Consensus       261 ~g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~p  324 (343)
T TIGR02244       261 TGSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIP  324 (343)
T ss_pred             CCcccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEEch
Confidence                1111            235566778899999999999999 8999998 99999998876

A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.

>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544

Probab=99.09  E-value=7.7e-10  Score=101.75  Aligned_cols=95  Identities=20%  Similarity=0.268  Sum_probs=83.6

Q ss_pred             CCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEE------EeCCCCCCCCCCH---------HH
Q 017995           68 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVI------VGSDEVRTGKPSP---------DI  132 (362)
Q Consensus        68 ~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~i------v~~~d~~~gKp~p---------~~  132 (362)
                      .+++.||+.++++.|+++|++++|+|++....++..| +++|+.+.+..|      +..+.+-.|+|.|         ..
T Consensus       119 ~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL-~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v  197 (277)
T TIGR01544       119 DVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVL-RQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDV  197 (277)
T ss_pred             CCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHH-HHcCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHH
Confidence            6899999999999999999999999999999999999 888987777777      5556666788888         77


Q ss_pred             HHHHHHHcC--CCCCcEEEEecCHhhHHHHHHc
Q 017995          133 FLEAAKRLN--MEPSSSLVIEDSVIGVVAGKAA  163 (362)
Q Consensus       133 ~~~~~~~~~--~~p~~~l~igDs~~d~~aA~~a  163 (362)
                      ++.+.+.++  .++++|++|||+.+|+.+|...
T Consensus       198 ~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~  230 (277)
T TIGR01544       198 ALRNTEYFNQLKDRSNIILLGDSQGDLRMADGV  230 (277)
T ss_pred             HHHHHHHhCccCCcceEEEECcChhhhhHhcCC
Confidence            777888888  8999999999999999997655

This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.

>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase

Probab=99.06  E-value=5.3e-10  Score=111.77  Aligned_cols=92  Identities=22%  Similarity=0.317  Sum_probs=80.6

Q ss_pred             CCchHHHHHHHHHHCCCcEEEEcCCCh------------HhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHH
Q 017995           71 ALPGANRLIKHLSCHGVPMALASNSHR------------ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAK  138 (362)
Q Consensus        71 ~~pgv~~~L~~L~~~g~~~~i~S~~~~------------~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~  138 (362)
                      ++|||.+.|+.|++.||+++|+||.+.            ..+..++ +.+|+.  |+.+++.++..+.||+|+++..+++
T Consensus       198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL-~~lgip--fdviia~~~~~~RKP~pGm~~~a~~  274 (526)
T TIGR01663       198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIV-AKLGVP--FQVFIAIGAGFYRKPLTGMWDHLKE  274 (526)
T ss_pred             cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHH-HHcCCc--eEEEEeCCCCCCCCCCHHHHHHHHH
Confidence            689999999999999999999999877            3466666 778874  8888888888889999999999999


Q ss_pred             HcC----CCCCcEEEEecCHhhHHHHHHcCC
Q 017995          139 RLN----MEPSSSLVIEDSVIGVVAGKAAGM  165 (362)
Q Consensus       139 ~~~----~~p~~~l~igDs~~d~~aA~~aG~  165 (362)
                      +++    +++++|+||||+..|+.+|+.+|-
T Consensus       275 ~~~~~~~Id~~~S~~VGDaagr~~~g~~ag~  305 (526)
T TIGR01663       275 EANDGTEIQEDDCFFVGDAAGRPANGKAAGK  305 (526)
T ss_pred             hcCcccCCCHHHeEEeCCcccchHHHHhcCC
Confidence            985    899999999999999887776654

Note that the EC number for the kinase function is: 2.7.1.78

>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]

Probab=99.02  E-value=2.5e-09  Score=92.06  Aligned_cols=105  Identities=23%  Similarity=0.323  Sum_probs=84.7

Q ss_pred             hcCCCCCchHHHHHHHHHHCCCcEEEEcCCC---------------hHhHHHHHHhhcCCcCCCcEEEeCC-----CCCC
Q 017995           66 LCKVKALPGANRLIKHLSCHGVPMALASNSH---------------RATIESKISYQHGWNESFSVIVGSD-----EVRT  125 (362)
Q Consensus        66 ~~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~---------------~~~i~~~L~~~~gl~~~f~~iv~~~-----d~~~  125 (362)
                      .....+.||+.+.|..|++.||++.++||.+               ...+...| +..|.  .|+.|..+.     .+.+
T Consensus        27 ~~~~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l-~~~gv--~id~i~~Cph~p~~~c~c  103 (181)
T COG0241          27 LDDFQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKIL-ASQGV--KIDGILYCPHHPEDNCDC  103 (181)
T ss_pred             HHHhccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHH-HHcCC--ccceEEECCCCCCCCCcc
Confidence            3467899999999999999999999999942               12233333 33343  567776653     3668


Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEEEcCC
Q 017995          126 GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL  173 (362)
Q Consensus       126 gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~~~  173 (362)
                      .||.|.++..+++++++++++.+||||..+|+++|.++|++.+.+..+
T Consensus       104 RKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~~  151 (181)
T COG0241         104 RKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVLTG  151 (181)
T ss_pred             cCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCCceEEEcC
Confidence            899999999999999999999999999999999999999997666553

>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein

Probab=99.01  E-value=2.2e-08  Score=88.92  Aligned_cols=100  Identities=16%  Similarity=0.090  Sum_probs=80.0

Q ss_pred             cCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcE--------EEeCCCCCCCCCCHHHHHHHHH
Q 017995           67 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSV--------IVGSDEVRTGKPSPDIFLEAAK  138 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~--------iv~~~d~~~gKp~p~~~~~~~~  138 (362)
                      ..++++||+.++|+.|++.+ +++|+|++...+++.++ +.+|+..+|..        .+++... ..++++......++
T Consensus        65 ~~i~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il-~~lgi~~~~an~l~~~~~g~~tG~~~-~~~~~K~~~l~~l~  141 (203)
T TIGR02137        65 ATLKPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLM-RQLGFPTLLCHKLEIDDSDRVVGYQL-RQKDPKRQSVIAFK  141 (203)
T ss_pred             HhCCCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHH-HHcCCchhhceeeEEecCCeeECeee-cCcchHHHHHHHHH
Confidence            45689999999999999975 99999999999999888 89999887762        2223222 23566666666666


Q ss_pred             HcCCCCCcEEEEecCHhhHHHHHHcCCEEEEEcC
Q 017995          139 RLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS  172 (362)
Q Consensus       139 ~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~~  172 (362)
                      +.+   .+|++|||+.+|+.+++.+|+.+.....
T Consensus       142 ~~~---~~~v~vGDs~nDl~ml~~Ag~~ia~~ak  172 (203)
T TIGR02137       142 SLY---YRVIAAGDSYNDTTMLSEAHAGILFHAP  172 (203)
T ss_pred             hhC---CCEEEEeCCHHHHHHHHhCCCCEEecCC
Confidence            655   3899999999999999999999988765

This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).

>cd02064 FAD_synthetase_N FAD synthetase, N-terminal domain of the bifunctional enzyme

Probab=99.00  E-value=1.7e-09  Score=94.23  Aligned_cols=113  Identities=26%  Similarity=0.337  Sum_probs=83.0

Q ss_pred             hHHHHHHHHHHCCCcEEEE--------cCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCC---CHHHHHHHHHHcCC
Q 017995           74 GANRLIKHLSCHGVPMALA--------SNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKP---SPDIFLEAAKRLNM  142 (362)
Q Consensus        74 gv~~~L~~L~~~g~~~~i~--------S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp---~p~~~~~~~~~~~~  142 (362)
                      ...+=++.|++.|+...++        ..++++|++.++ ...+.    +.+++|+|+++|+.   +.+.+...      
T Consensus        57 ~~e~R~~~l~~l~vd~v~~~~f~~~~~~~s~~~Fi~~il-~~~~~----~~ivvG~Df~FG~~~~g~~~~L~~~------  125 (180)
T cd02064          57 TLEEKLELLESLGVDYLLVLPFDKEFASLSAEEFVEDLL-VKLNA----KHVVVGFDFRFGKGRSGDAELLKEL------  125 (180)
T ss_pred             CHHHHHHHHHHcCCCEEEEeCCCHHHHcCCHHHHHHHHH-hhcCC----eEEEEccCCCCCCCCCCCHHHHHHh------
Confidence            4456667788888877664        246788888777 33243    89999999999865   44444332      


Q ss_pred             CCCcEEEEecCHhhHHHHHHcCCEEEEEcCCCCccccccchhHhhcccccccccccCCCCCCccccCCCCCCceeEeeee
Q 017995          143 EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPV  222 (362)
Q Consensus       143 ~p~~~l~igDs~~d~~aA~~aG~~~i~v~~~~~~~~~~ssa~~vi~~l~el~~~~~~l~~~~~~~a~~lLgrp~~i~g~v  222 (362)
                                       +.+.|+.++.++....++..+|| +.+++.+.++++..          |+.||||||+++|+|
T Consensus       126 -----------------~~~~g~~v~~v~~~~~~~~~iSS-T~IR~~i~~G~i~~----------an~lLg~~y~~~g~V  177 (180)
T cd02064         126 -----------------GKKYGFEVTVVPPVTLDGERVSS-TRIREALAEGDVEL----------ANELLGRPYSIEGRV  177 (180)
T ss_pred             -----------------hhhcCcEEEEeCcEecCCcEEcH-HHHHHHHHhCCHHH----------HHHHcCCCcEEEEEE
Confidence                             56789999999886555555653 66666666787774          999999999999999


Q ss_pred             eec
Q 017995          223 VKG  225 (362)
Q Consensus       223 ~~G  225 (362)
                      +||
T Consensus       178 ~~G  180 (180)
T cd02064         178 VHG  180 (180)
T ss_pred             eeC
Confidence            998

FAD synthetase_N. N-terminal domain of the bifunctional riboflavin biosynthesis protein riboflavin kinase/FAD synthetase. These enzymes have both ATP:riboflavin 5'-phosphotransferase and ATP:FMN-adenylyltransferase activities. The N-terminal domain is believed to play a role in the adenylylation reaction of FAD synthetases. The C-terminal domain is thought to have kinase activity. FAD synthetase is present among all kingdoms of life. However, the bifunctional enzyme is not found in mammals, which use separate enzymes for FMN and FAD formation.

>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional

Probab=98.95  E-value=2.6e-09  Score=93.32  Aligned_cols=82  Identities=17%  Similarity=0.269  Sum_probs=72.3

Q ss_pred             HHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhh
Q 017995           77 RLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG  156 (362)
Q Consensus        77 ~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d  156 (362)
                      ..++.|+++|++++|+|+.+...+...+ +.+|+..+|+    +     .++.++.+..+++++|++|++|+||||+.+|
T Consensus        55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l-~~lgl~~~f~----g-----~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D  124 (183)
T PRK09484         55 YGIRCLLTSGIEVAIITGRKSKLVEDRM-TTLGITHLYQ----G-----QSNKLIAFSDLLEKLAIAPEQVAYIGDDLID  124 (183)
T ss_pred             HHHHHHHHCCCEEEEEeCCCcHHHHHHH-HHcCCceeec----C-----CCcHHHHHHHHHHHhCCCHHHEEEECCCHHH
Confidence            4678888999999999999999999888 8889866654    2     3566899999999999999999999999999


Q ss_pred             HHHHHHcCCEEE
Q 017995          157 VVAGKAAGMEVV  168 (362)
Q Consensus       157 ~~aA~~aG~~~i  168 (362)
                      +.+|+++|+.++
T Consensus       125 ~~~a~~aG~~~~  136 (183)
T PRK09484        125 WPVMEKVGLSVA  136 (183)
T ss_pred             HHHHHHCCCeEe
Confidence            999999999954

>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like

Probab=98.91  E-value=7.1e-09  Score=89.56  Aligned_cols=96  Identities=21%  Similarity=0.243  Sum_probs=78.0

Q ss_pred             cCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCC------------CCCCCCCHHHHH
Q 017995           67 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDE------------VRTGKPSPDIFL  134 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d------------~~~gKp~p~~~~  134 (362)
                      +.++++||+.++|+.|+++|++++|+|++...+++..+ +.+|+...|...+..++            ...+..++..+.
T Consensus        70 ~~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~-~~~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~  148 (177)
T TIGR01488        70 RQVALRPGARELISWLKERGIDTVIVSGGFDFFVEPVA-EKLGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLK  148 (177)
T ss_pred             hcCCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHH-HHcCCchheeeeEEECCCCEEeCccCCcccCCcchHHHHHH
Confidence            45678999999999999999999999999999999888 88898776654433321            122344567888


Q ss_pred             HHHHHcCCCCCcEEEEecCHhhHHHHHHc
Q 017995          135 EAAKRLNMEPSSSLVIEDSVIGVVAGKAA  163 (362)
Q Consensus       135 ~~~~~~~~~p~~~l~igDs~~d~~aA~~a  163 (362)
                      ..+++.++++++|++|||+.+|+.+++.+
T Consensus       149 ~~~~~~~~~~~~~~~iGDs~~D~~~~~~a  177 (177)
T TIGR01488       149 ELLEESKITLKKIIAVGDSVNDLPMLKLA  177 (177)
T ss_pred             HHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence            88888899999999999999999998753

Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.

>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457

Probab=98.89  E-value=6.4e-10  Score=102.02  Aligned_cols=104  Identities=19%  Similarity=0.222  Sum_probs=76.4

Q ss_pred             CCCchHHHHHHHHHHCCCcEEEEcCCChHhHHH--HHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 017995           70 KALPGANRLIKHLSCHGVPMALASNSHRATIES--KISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS  147 (362)
Q Consensus        70 ~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~--~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~  147 (362)
                      ..++.+...+..|+ +|.+ .++||.+..+...  .+...-.+...++.+.+.+.+..+||+|++|..+++++++++++|
T Consensus       121 ~~y~~l~~a~~~l~-~g~~-~i~tN~D~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~~~~~~~~~  198 (249)
T TIGR01457       121 IDYEKFATATLAIR-KGAH-FIGTNGDLAIPTERGLLPGNGSLITVLEVATGVKPVYIGKPNAIIMEKAVEHLGTEREET  198 (249)
T ss_pred             CCHHHHHHHHHHHH-CCCe-EEEECCCCCCCCCCCCCCCcHHHHHHHHHHhCCCccccCCChHHHHHHHHHHcCCCcccE
Confidence            34556666777774 5776 7778876554321  110111122234556666777789999999999999999999999


Q ss_pred             EEEecCH-hhHHHHHHcCCEEEEEcCCCC
Q 017995          148 LVIEDSV-IGVVAGKAAGMEVVAVPSLPK  175 (362)
Q Consensus       148 l~igDs~-~d~~aA~~aG~~~i~v~~~~~  175 (362)
                      +||||+. +|+.+|+++|+++++|.++..
T Consensus       199 ~~VGD~~~~Di~~a~~~G~~~v~v~~G~~  227 (249)
T TIGR01457       199 LMVGDNYLTDIRAGIDAGIDTLLVHTGVT  227 (249)
T ss_pred             EEECCCchhhHHHHHHcCCcEEEEcCCCC
Confidence            9999997 899999999999999988643

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.

>PLN02645 phosphoglycolate phosphatase

Probab=98.89  E-value=5.1e-10  Score=106.02  Aligned_cols=115  Identities=20%  Similarity=0.211  Sum_probs=83.3

Q ss_pred             HHHHHHHHH-CCCcEEEEcCCChHh-HHHHHHhhcCCcCCCcEEEeCCCCC---CCCCCHHHHHHHHHHcCCCCCcEEEE
Q 017995           76 NRLIKHLSC-HGVPMALASNSHRAT-IESKISYQHGWNESFSVIVGSDEVR---TGKPSPDIFLEAAKRLNMEPSSSLVI  150 (362)
Q Consensus        76 ~~~L~~L~~-~g~~~~i~S~~~~~~-i~~~L~~~~gl~~~f~~iv~~~d~~---~gKp~p~~~~~~~~~~~~~p~~~l~i  150 (362)
                      ......|++ .| .+.|+||.+..+ ....+ ...|+..+|+.+.++....   .|||+|.+|..+++++++++++|+||
T Consensus       176 ~~a~~~l~~~~g-~~~i~tn~d~~~~~~~~~-~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~a~~~~~~~~~~~~~V  253 (311)
T PLN02645        176 QYATLCIRENPG-CLFIATNRDAVTHLTDAQ-EWAGAGSMVGAIKGSTEREPLVVGKPSTFMMDYLANKFGIEKSQICMV  253 (311)
T ss_pred             HHHHHHHhcCCC-CEEEEeCCCCCCCCCCCC-CccchHHHHHHHHHHhCCCcccCCCChHHHHHHHHHHcCCCcccEEEE
Confidence            334455554 34 588999988754 22333 4457777778776655433   47999999999999999999999999


Q ss_pred             ecCH-hhHHHHHHcCCEEEEEcCCCCccccc------cchhHhhccccc
Q 017995          151 EDSV-IGVVAGKAAGMEVVAVPSLPKQTHRY------TAADEVINSLLD  192 (362)
Q Consensus       151 gDs~-~d~~aA~~aG~~~i~v~~~~~~~~~~------ssa~~vi~~l~e  192 (362)
                      ||+. +|+.+|+++|+++++|.++....+..      ..++.+++++.+
T Consensus       254 GD~~~~Di~~A~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~  302 (311)
T PLN02645        254 GDRLDTDILFGQNGGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISD  302 (311)
T ss_pred             cCCcHHHHHHHHHcCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHH
Confidence            9997 99999999999999998865432221      124555555554

>PTZ00445 p36-lilke protein; Provisional

Probab=98.83  E-value=3.8e-08  Score=86.03  Aligned_cols=101  Identities=15%  Similarity=0.211  Sum_probs=83.7

Q ss_pred             CCchHHHHHHHHHHCCCcEEEEcCCChH---------------hHHHHHHhhcCCcCCCcEEEeCCCC-----------C
Q 017995           71 ALPGANRLIKHLSCHGVPMALASNSHRA---------------TIESKISYQHGWNESFSVIVGSDEV-----------R  124 (362)
Q Consensus        71 ~~pgv~~~L~~L~~~g~~~~i~S~~~~~---------------~i~~~L~~~~gl~~~f~~iv~~~d~-----------~  124 (362)
                      +.|....++..|++.|++++|+|-+++.               +++..| +.-+..-..+.+++...-           +
T Consensus        76 ~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~l-k~s~~~~~i~~~~~yyp~~w~~p~~y~~~g  154 (219)
T PTZ00445         76 VTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAAL-KKSKCDFKIKKVYAYYPKFWQEPSDYRPLG  154 (219)
T ss_pred             CCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHH-HhcCccceeeeeeeeCCcccCChhhhhhhc
Confidence            6789999999999999999999988774               466666 544444444556654322           3


Q ss_pred             CCCCCHHH--H--HHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEEEcC
Q 017995          125 TGKPSPDI--F--LEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS  172 (362)
Q Consensus       125 ~gKp~p~~--~--~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~~  172 (362)
                      ..||+|++  |  +.++++.|++|++|++|.|+...+++|++.|+.++.+..
T Consensus       155 l~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi~ai~f~~  206 (219)
T PTZ00445        155 LDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNALKEGYIALHVTG  206 (219)
T ss_pred             ccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCCEEEEcCC
Confidence            55999999  9  999999999999999999999999999999999999865

>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain

Probab=98.82  E-value=2.1e-09  Score=92.00  Aligned_cols=99  Identities=8%  Similarity=0.054  Sum_probs=87.6

Q ss_pred             CCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcC-CCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCc
Q 017995           68 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE-SFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS  146 (362)
Q Consensus        68 ~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~-~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~  146 (362)
                      .+...||+.++|+.|.+. +.++|.|++.+.+++.++ +.++... +|+.+++.+++...+|.   +...+..+|.++++
T Consensus        40 ~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il-~~ldp~~~~f~~~l~r~~~~~~~~~---~~K~L~~l~~~~~~  114 (162)
T TIGR02251        40 YVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVL-DILDRGGKVISRRLYRESCVFTNGK---YVKDLSLVGKDLSK  114 (162)
T ss_pred             EEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHH-HHHCcCCCEEeEEEEccccEEeCCC---EEeEchhcCCChhh
Confidence            367899999999999987 999999999999999988 8888775 89999999988877776   67778889999999


Q ss_pred             EEEEecCHhhHHHHHHcCCEEEEEc
Q 017995          147 SLVIEDSVIGVVAGKAAGMEVVAVP  171 (362)
Q Consensus       147 ~l~igDs~~d~~aA~~aG~~~i~v~  171 (362)
                      ||+|||++.++.++.++|+.+....
T Consensus       115 vIiVDD~~~~~~~~~~NgI~i~~f~  139 (162)
T TIGR02251       115 VIIIDNSPYSYSLQPDNAIPIKSWF  139 (162)
T ss_pred             EEEEeCChhhhccCccCEeecCCCC
Confidence            9999999999999999998865543

This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.

>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

Probab=98.80  E-value=5.4e-08  Score=89.35  Aligned_cols=70  Identities=29%  Similarity=0.484  Sum_probs=57.5

Q ss_pred             CCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCEEEEEcCCCCccccc----cchhHhhcccccc
Q 017995          124 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRY----TAADEVINSLLDL  193 (362)
Q Consensus       124 ~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~-~d~~aA~~aG~~~i~v~~~~~~~~~~----ssa~~vi~~l~el  193 (362)
                      ..|||++.+|..++++++.++++|+||||+. +|+.+|.++||.++.|.++-...+..    ..+++++.++.++
T Consensus       187 ~~GKP~~~i~~~al~~~~~~~~~~~mVGD~~~TDI~~a~~~G~~t~LV~TGv~~~~~~~~~~~~p~~v~~sl~~~  261 (269)
T COG0647         187 VIGKPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSAEDLDRAEVKPTYVVDSLAEL  261 (269)
T ss_pred             ccCCCCHHHHHHHHHHhCCCcccEEEEcCCchhhHHHHHHcCCCEEEEccCCCChhhhhhhccCCcchHhhHHHH
Confidence            3579999999999999999999999999999 99999999999999999875433221    2346666666664

>PRK08238 hypothetical protein; Validated

Probab=98.68  E-value=1.8e-07  Score=93.28  Aligned_cols=97  Identities=13%  Similarity=0.083  Sum_probs=80.3

Q ss_pred             CCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 017995           68 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS  147 (362)
Q Consensus        68 ~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~  147 (362)
                      ..++.||+.++|+.++++|++++++|++++..++..+ +++|+   |+.++++++....||++... ...+.++  .+++
T Consensus        70 ~lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~-~~lGl---Fd~Vigsd~~~~~kg~~K~~-~l~~~l~--~~~~  142 (479)
T PRK08238         70 TLPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVA-AHLGL---FDGVFASDGTTNLKGAAKAA-ALVEAFG--ERGF  142 (479)
T ss_pred             hCCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-HHcCC---CCEEEeCCCccccCCchHHH-HHHHHhC--ccCe
Confidence            4667899999999999999999999999999999888 88887   89999999887777765432 2334454  3669


Q ss_pred             EEEecCHhhHHHHHHcCCEEEEEcC
Q 017995          148 LVIEDSVIGVVAGKAAGMEVVAVPS  172 (362)
Q Consensus       148 l~igDs~~d~~aA~~aG~~~i~v~~  172 (362)
                      +++||+.+|+.+++.+| +.+.|.+
T Consensus       143 ~yvGDS~~Dlp~~~~A~-~av~Vn~  166 (479)
T PRK08238        143 DYAGNSAADLPVWAAAR-RAIVVGA  166 (479)
T ss_pred             eEecCCHHHHHHHHhCC-CeEEECC
Confidence            99999999999999999 5556655

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=98.68  E-value=4e-08  Score=89.70  Aligned_cols=93  Identities=19%  Similarity=0.278  Sum_probs=78.0

Q ss_pred             cCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHH--HHHHhhcCCcC-CCcEEEeCCCCCCCCCCHHHHHHHHHHcCCC
Q 017995           67 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIE--SKISYQHGWNE-SFSVIVGSDEVRTGKPSPDIFLEAAKRLNME  143 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~--~~L~~~~gl~~-~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~  143 (362)
                      ....++||+.++|+.|+++|++++|+||+++....  ..| +++|+.. +|+.|+++.+...     +.+..++++++.+
T Consensus        21 ~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L-~~~gl~~~~~~~Ii~s~~~~~-----~~l~~~~~~~~~~   94 (242)
T TIGR01459        21 DGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTL-KSLGINADLPEMIISSGEIAV-----QMILESKKRFDIR   94 (242)
T ss_pred             cCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHH-HHCCCCccccceEEccHHHHH-----HHHHhhhhhccCC
Confidence            45678999999999999999999999999988765  567 8899987 8999999876643     4677777888999


Q ss_pred             CCcEEEEecCHhhHHHHHHcCC
Q 017995          144 PSSSLVIEDSVIGVVAGKAAGM  165 (362)
Q Consensus       144 p~~~l~igDs~~d~~aA~~aG~  165 (362)
                      |.+|++|||+..|++.....|.
T Consensus        95 ~~~~~~vGd~~~d~~~~~~~~~  116 (242)
T TIGR01459        95 NGIIYLLGHLENDIINLMQCYT  116 (242)
T ss_pred             CceEEEeCCcccchhhhcCCCc
Confidence            9999999999988887655443

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=98.66  E-value=8.3e-07  Score=79.29  Aligned_cols=103  Identities=19%  Similarity=0.277  Sum_probs=87.5

Q ss_pred             CCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCC---CC-------CCCCCHHHHHHHHH
Q 017995           69 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDE---VR-------TGKPSPDIFLEAAK  138 (362)
Q Consensus        69 ~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d---~~-------~gKp~p~~~~~~~~  138 (362)
                      .+++||+.++++.++++|++++|+|+++..+++.+. +.+|++..+-.....+|   .+       .++.+...+...++
T Consensus        76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia-~~lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~  154 (212)
T COG0560          76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIA-ERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAA  154 (212)
T ss_pred             CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHH-HHhCCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHH
Confidence            799999999999999999999999999999988877 89999877665555554   11       22446678889999


Q ss_pred             HcCCCCCcEEEEecCHhhHHHHHHcCCEEEEEcC
Q 017995          139 RLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS  172 (362)
Q Consensus       139 ~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~~  172 (362)
                      ++|+++++++++|||.+|+-.-..+|..++.-+.
T Consensus       155 ~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~  188 (212)
T COG0560         155 ELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPK  188 (212)
T ss_pred             HcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcC
Confidence            9999999999999999999999999999876544

>PRK10444 UMP phosphatase; Provisional

Probab=98.62  E-value=2e-08  Score=92.04  Aligned_cols=77  Identities=25%  Similarity=0.371  Sum_probs=60.2

Q ss_pred             EEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCEEEEEcCCCCccccc----cchhHhhcccc
Q 017995          117 IVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRY----TAADEVINSLL  191 (362)
Q Consensus       117 iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~-~d~~aA~~aG~~~i~v~~~~~~~~~~----ssa~~vi~~l~  191 (362)
                      +.+.+....|||+|++|..++++++++|++|+||||+. +|+.+|+++|+.+++|.++....+..    ..++.+++++.
T Consensus       164 ~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~  243 (248)
T PRK10444        164 ISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDIDSMPFRPSWIYPSVA  243 (248)
T ss_pred             HhCCCccccCCCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHHhcCCCCCCEEECCHH
Confidence            44445555789999999999999999999999999997 89999999999999998865433221    13455555555


Q ss_pred             cc
Q 017995          192 DL  193 (362)
Q Consensus       192 el  193 (362)
                      ++
T Consensus       244 el  245 (248)
T PRK10444        244 DI  245 (248)
T ss_pred             Hh
Confidence            43

>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea

Probab=98.58  E-value=4.3e-07  Score=77.81  Aligned_cols=103  Identities=17%  Similarity=0.210  Sum_probs=73.1

Q ss_pred             cCCCCCchHHHHHHHHHHCCCcEEEEcCCC-hHhHHHHHHhhcCCc----------CCCcEEEeCCCCCCCCCCHHHHHH
Q 017995           67 CKVKALPGANRLIKHLSCHGVPMALASNSH-RATIESKISYQHGWN----------ESFSVIVGSDEVRTGKPSPDIFLE  135 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~-~~~i~~~L~~~~gl~----------~~f~~iv~~~d~~~gKp~p~~~~~  135 (362)
                      ..+.++|+|.+.|+.|+++|++++++|.++ .+.++..| +.+++.          ++|+..-...    + .....|..
T Consensus        42 ~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L-~~l~i~~~~~~~~~~~~~F~~~eI~~----g-sK~~Hf~~  115 (169)
T PF12689_consen   42 EEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELL-KLLEIDDADGDGVPLIEYFDYLEIYP----G-SKTTHFRR  115 (169)
T ss_dssp             -EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHH-HHTT-C----------CCECEEEESS----S--HHHHHHH
T ss_pred             CEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHH-HhcCCCccccccccchhhcchhheec----C-chHHHHHH
Confidence            468999999999999999999999999654 45777777 889998          7777654433    2 45788999


Q ss_pred             HHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEEEcCCCC
Q 017995          136 AAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPK  175 (362)
Q Consensus       136 ~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~~~~~  175 (362)
                      +.++.|++.++++++.|-...++...+.|+.++.|+.+..
T Consensus       116 i~~~tgI~y~eMlFFDDe~~N~~~v~~lGV~~v~v~~Glt  155 (169)
T PF12689_consen  116 IHRKTGIPYEEMLFFDDESRNIEVVSKLGVTCVLVPDGLT  155 (169)
T ss_dssp             HHHHH---GGGEEEEES-HHHHHHHHTTT-EEEE-SSS--
T ss_pred             HHHhcCCChhHEEEecCchhcceeeEecCcEEEEeCCCCC
Confidence            9999999999999999999999999999999999988543

The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.

>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase

Probab=98.53  E-value=2.1e-07  Score=95.09  Aligned_cols=88  Identities=20%  Similarity=0.263  Sum_probs=71.0

Q ss_pred             CCCCCchHHHHHHHHHHCC-CcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCc
Q 017995           68 KVKALPGANRLIKHLSCHG-VPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS  146 (362)
Q Consensus        68 ~~~~~pgv~~~L~~L~~~g-~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~  146 (362)
                      +.+++||+.++|+.|+++| ++++++|+.+...++..+ +++|+.++|..+           .|+.=...+++++..+.+
T Consensus       382 ~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~-~~lgi~~~f~~~-----------~p~~K~~~v~~l~~~~~~  449 (556)
T TIGR01525       382 RDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVA-AELGIDEVHAEL-----------LPEDKLAIVKELQEEGGV  449 (556)
T ss_pred             cccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHH-HHhCCCeeeccC-----------CHHHHHHHHHHHHHcCCE
Confidence            3679999999999999999 999999999999999888 899997666533           112222344555557789


Q ss_pred             EEEEecCHhhHHHHHHcCCEE
Q 017995          147 SLVIEDSVIGVVAGKAAGMEV  167 (362)
Q Consensus       147 ~l~igDs~~d~~aA~~aG~~~  167 (362)
                      |+||||+.+|+.+++++|+.+
T Consensus       450 v~~vGDg~nD~~al~~A~vgi  470 (556)
T TIGR01525       450 VAMVGDGINDAPALAAADVGI  470 (556)
T ss_pred             EEEEECChhHHHHHhhCCEeE
Confidence            999999999999999999543

This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.

>COG4229 Predicted enolase-phosphatase [Energy production and conversion]

Probab=98.46  E-value=8.6e-06  Score=69.08  Aligned_cols=102  Identities=19%  Similarity=0.205  Sum_probs=82.8

Q ss_pred             CCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHH--HhhcCCcCCCcEEEeCCCCCCC-CCCHHHHHHHHHHcCCCC
Q 017995           68 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKI--SYQHGWNESFSVIVGSDEVRTG-KPSPDIFLEAAKRLNMEP  144 (362)
Q Consensus        68 ~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L--~~~~gl~~~f~~iv~~~d~~~g-Kp~p~~~~~~~~~~~~~p  144 (362)
                      +..++|++.+.|+..++.|+++.|.|+.+.....-++  ....+|..+|+.-   .|...| |-....|..++...|++|
T Consensus       101 kahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs~agdL~~lfsGy---fDttiG~KrE~~SY~kIa~~iGl~p  177 (229)
T COG4229         101 KAHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHSDAGDLNSLFSGY---FDTTIGKKRESQSYAKIAGDIGLPP  177 (229)
T ss_pred             ccccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcccccccHHhhhcce---eeccccccccchhHHHHHHhcCCCc
Confidence            5889999999999999999999999999888655444  1223444444432   334443 667889999999999999


Q ss_pred             CcEEEEecCHhhHHHHHHcCCEEEEEcC
Q 017995          145 SSSLVIEDSVIGVVAGKAAGMEVVAVPS  172 (362)
Q Consensus       145 ~~~l~igDs~~d~~aA~~aG~~~i~v~~  172 (362)
                      .+++++.|.+..+.||+.+|+.++.+..
T Consensus       178 ~eilFLSDn~~EL~AA~~vGl~t~l~~R  205 (229)
T COG4229         178 AEILFLSDNPEELKAAAGVGLATGLAVR  205 (229)
T ss_pred             hheEEecCCHHHHHHHHhcchheeeeec
Confidence            9999999999999999999999998765

>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase

Probab=98.39  E-value=9.5e-07  Score=89.89  Aligned_cols=88  Identities=22%  Similarity=0.278  Sum_probs=72.2

Q ss_pred             CCCCCchHHHHHHHHHHCCC-cEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCc
Q 017995           68 KVKALPGANRLIKHLSCHGV-PMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS  146 (362)
Q Consensus        68 ~~~~~pgv~~~L~~L~~~g~-~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~  146 (362)
                      +.+++||+.++|+.|+++|+ +++++|+.++..++..+ +++|+.++|..+.         |  +.-...+++++..+++
T Consensus       360 ~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~-~~lgi~~~f~~~~---------p--~~K~~~i~~l~~~~~~  427 (536)
T TIGR01512       360 SDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVA-RELGIDEVHAELL---------P--EDKLEIVKELREKYGP  427 (536)
T ss_pred             eccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHH-HHcCChhhhhccC---------c--HHHHHHHHHHHhcCCE
Confidence            46789999999999999999 99999999999999888 8999977664321         2  2223455666667789


Q ss_pred             EEEEecCHhhHHHHHHcCCEE
Q 017995          147 SLVIEDSVIGVVAGKAAGMEV  167 (362)
Q Consensus       147 ~l~igDs~~d~~aA~~aG~~~  167 (362)
                      |+||||+.+|+.+++++|+.+
T Consensus       428 v~~vGDg~nD~~al~~A~vgi  448 (536)
T TIGR01512       428 VAMVGDGINDAPALAAADVGI  448 (536)
T ss_pred             EEEEeCCHHHHHHHHhCCEEE
Confidence            999999999999999999633

.

>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []

Probab=98.38  E-value=1.2e-06  Score=74.62  Aligned_cols=98  Identities=20%  Similarity=0.301  Sum_probs=68.7

Q ss_pred             CCCCC-chHHHHHHHHHHCCCcEEEEcCCC---h-----------HhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHH
Q 017995           68 KVKAL-PGANRLIKHLSCHGVPMALASNSH---R-----------ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDI  132 (362)
Q Consensus        68 ~~~~~-pgv~~~L~~L~~~g~~~~i~S~~~---~-----------~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~  132 (362)
                      ...++ |+|.+.|+.|.+.||.+.|+||..   .           .-++.++ +.+++.  +...++...-.++||.+.+
T Consensus        26 D~~~~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il-~~l~ip--~~~~~a~~~d~~RKP~~GM  102 (159)
T PF08645_consen   26 DWKFFPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENIL-KELGIP--IQVYAAPHKDPCRKPNPGM  102 (159)
T ss_dssp             GGEEC-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHH-HHCTS---EEEEECGCSSTTSTTSSHH
T ss_pred             HhhhcchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHH-HHcCCc--eEEEecCCCCCCCCCchhH
Confidence            45555 489999999999999999999852   1           1222233 455553  3344444444689999999


Q ss_pred             HHHHHHHcCC----CCCcEEEEecC-----------HhhHHHHHHcCCEEE
Q 017995          133 FLEAAKRLNM----EPSSSLVIEDS-----------VIGVVAGKAAGMEVV  168 (362)
Q Consensus       133 ~~~~~~~~~~----~p~~~l~igDs-----------~~d~~aA~~aG~~~i  168 (362)
                      +..++++++.    +.++++||||+           ..|.+-|.+.|++..
T Consensus       103 ~~~~~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~gi~f~  153 (159)
T PF08645_consen  103 WEFALKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALNCGIKFY  153 (159)
T ss_dssp             HHHHCCCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHHHT--EE
T ss_pred             HHHHHHhccccccccccceEEEeccCCCCCcccccChhHHHHHHHcCCccc
Confidence            9999998874    89999999996           588999999999864

; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....

>PRK11590 hypothetical protein; Provisional

Probab=98.36  E-value=1.7e-05  Score=70.87  Aligned_cols=164  Identities=12%  Similarity=0.075  Sum_probs=102.0

Q ss_pred             HHHHHHHHHHH-HHcCCCC-CHHHHHhhcCCCHHHHHHHH--------HH-HhCCCCCHHHHHHHHHHHHHhhh-cCCCC
Q 017995            4 GMFSEVLKTFL-VKYGKEW-DGREKHKIVGKTPLEEAAII--------VE-DYGLPCAKHEFVNEVYSMFSDHL-CKVKA   71 (362)
Q Consensus         4 ~~~~~a~~~~l-~~~g~~~-~~~~~~~~~g~~~~~~~~~~--------~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~   71 (362)
                      .....+|..++ +++|++. +.+....++|.+.....+..        .. ..+.  +.+++ +...+.|.+.+ ....+
T Consensus        20 ~d~~~~~~~~~~~~~g~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~g~--~~~~~-~~~~~~f~~~~~~~~~~   96 (211)
T PRK11590         20 QDMFGSFLRYLLRRQPLNLLLVLPLLPVIGLGLLVKGRAARWPMSLLLWGCTFGH--SEARL-QALEADFVRWFRDNVTA   96 (211)
T ss_pred             cchHHHHHHHHHHhcchhhHHHhHHHHHhccCcccchhhhhhhHHHHHHHHHcCC--CHHHH-HHHHHHHHHHHHHhCcC
Confidence            34566777777 8888764 34666777887665533321        11 1133  33332 22222333333 23678


Q ss_pred             CchHHHHH-HHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCC-CCCC-C----CC--CHHHHHHHHHHcCC
Q 017995           72 LPGANRLI-KHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD-EVRT-G----KP--SPDIFLEAAKRLNM  142 (362)
Q Consensus        72 ~pgv~~~L-~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~-d~~~-g----Kp--~p~~~~~~~~~~~~  142 (362)
                      +||+.++| +.|++.|++++|+|++++.+++..+ +.+++.. .+.+++.. ++.+ |    .+  ..+=...+.+.++.
T Consensus        97 ~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il-~~l~~~~-~~~~i~t~l~~~~tg~~~g~~c~g~~K~~~l~~~~~~  174 (211)
T PRK11590         97 FPVVQERLTTYLLSSDADVWLITGSPQPLVEQVY-FDTPWLP-RVNLIASQMQRRYGGWVLTLRCLGHEKVAQLERKIGT  174 (211)
T ss_pred             CccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHH-HHccccc-cCceEEEEEEEEEccEECCccCCChHHHHHHHHHhCC
Confidence            99999999 6799999999999999999999888 7777532 24444443 1110 1    11  01112223334466


Q ss_pred             CCCcEEEEecCHhhHHHHHHcCCEEEEEcC
Q 017995          143 EPSSSLVIEDSVIGVVAGKAAGMEVVAVPS  172 (362)
Q Consensus       143 ~p~~~l~igDs~~d~~aA~~aG~~~i~v~~  172 (362)
                      +...+.+-|||.+|+..-.-+|-++++-+.
T Consensus       175 ~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp~  204 (211)
T PRK11590        175 PLRLYSGYSDSKQDNPLLYFCQHRWRVTPR  204 (211)
T ss_pred             CcceEEEecCCcccHHHHHhCCCCEEECcc
Confidence            777888999999999999999888765433

>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]

Probab=98.24  E-value=4.4e-06  Score=72.36  Aligned_cols=68  Identities=26%  Similarity=0.399  Sum_probs=54.4

Q ss_pred             CCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCEEEEEcCCCCcc---cc-ccchhHhhccccc
Q 017995          125 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQT---HR-YTAADEVINSLLD  192 (362)
Q Consensus       125 ~gKp~p~~~~~~~~~~~~~p~~~l~igDs~-~d~~aA~~aG~~~i~v~~~~~~~---~~-~ssa~~vi~~l~e  192 (362)
                      .|||+|..|..+++.+|++|++|+||||.. .|+-+|.+.||+-+.|.++....   +. -..++...+++.+
T Consensus       179 vGKP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVkTGK~rpsDe~k~~~~p~~~~d~f~~  251 (262)
T KOG3040|consen  179 VGKPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGILVKTGKFRPSDEEKPPVPPDLTADNFAD  251 (262)
T ss_pred             ecCCCHHHHHHHHHhcCCChHHheEEccccccchhhHhhhcceeEEeeccccCCcccccCCCCcchhhhhHHH
Confidence            469999999999999999999999999888 79999999999999998864322   21 2234556666554

>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase

Probab=98.17  E-value=6.7e-06  Score=84.16  Aligned_cols=87  Identities=20%  Similarity=0.238  Sum_probs=68.5

Q ss_pred             CCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 017995           68 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS  147 (362)
Q Consensus        68 ~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~  147 (362)
                      ..+++||+.++|+.|+++|++++++|+.++..++..+ +.+|+.     +++ + .   +|  +.-...+++++.++++|
T Consensus       403 ~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia-~~lgi~-----~~~-~-~---~p--~~K~~~v~~l~~~~~~v  469 (562)
T TIGR01511       403 EDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVA-KELGIN-----VRA-E-V---LP--DDKAALIKELQEKGRVV  469 (562)
T ss_pred             cccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHH-HHcCCc-----EEc-c-C---Ch--HHHHHHHHHHHHcCCEE
Confidence            3568999999999999999999999999999999888 888984     221 1 1   22  22233444555577899


Q ss_pred             EEEecCHhhHHHHHHcCCEE
Q 017995          148 LVIEDSVIGVVAGKAAGMEV  167 (362)
Q Consensus       148 l~igDs~~d~~aA~~aG~~~  167 (362)
                      +||||+.+|+.+++++|+.+
T Consensus       470 ~~VGDg~nD~~al~~A~vgi  489 (562)
T TIGR01511       470 AMVGDGINDAPALAQADVGI  489 (562)
T ss_pred             EEEeCCCccHHHHhhCCEEE
Confidence            99999999999999999753

One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.

>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA

Probab=98.15  E-value=1.9e-06  Score=78.46  Aligned_cols=49  Identities=29%  Similarity=0.554  Sum_probs=45.7

Q ss_pred             CCCCCCHHHHHHHHHHcCCCCCcE-EEEecCH-hhHHHHHHcCCEEEEEcC
Q 017995          124 RTGKPSPDIFLEAAKRLNMEPSSS-LVIEDSV-IGVVAGKAAGMEVVAVPS  172 (362)
Q Consensus       124 ~~gKp~p~~~~~~~~~~~~~p~~~-l~igDs~-~d~~aA~~aG~~~i~v~~  172 (362)
                      ..+||+|.+|..+++++++++.++ +||||+. +|+.+|+++|+++++|.+
T Consensus       185 ~~~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~~  235 (236)
T TIGR01460       185 VVGKPSPAIYRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLLVLT  235 (236)
T ss_pred             eecCCCHHHHHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEEEec
Confidence            368999999999999999999887 9999998 899999999999999965

Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.

>TIGR01684 viral_ppase viral phosphatase

Probab=98.11  E-value=7.7e-06  Score=75.48  Aligned_cols=64  Identities=14%  Similarity=0.174  Sum_probs=58.4

Q ss_pred             CCCC-chHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHH
Q 017995           69 VKAL-PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIF  133 (362)
Q Consensus        69 ~~~~-pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~  133 (362)
                      +++. ||+.++|+.|+++|++++|+|+++++.+...| +.+||..+|+.|+++++....||+|+..
T Consensus       144 v~irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L-~~lGLd~YFdvIIs~Gdv~~~kp~~e~~  208 (301)
T TIGR01684       144 VRIRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESM-RKVKLDRYFDIIISGGHKAEEYSTMSTE  208 (301)
T ss_pred             cccCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHH-HHcCCCcccCEEEECCccccCCCCcccc
Confidence            4455 99999999999999999999999999999888 8999999999999999999999988654

These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.

>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]

Probab=98.06  E-value=2.8e-06  Score=77.82  Aligned_cols=102  Identities=23%  Similarity=0.333  Sum_probs=70.8

Q ss_pred             CchHHHHHHHHHHCCCcEEEEcCCChHhH-HHHHHhhcCCcCCCcE---EEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 017995           72 LPGANRLIKHLSCHGVPMALASNSHRATI-ESKISYQHGWNESFSV---IVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS  147 (362)
Q Consensus        72 ~pgv~~~L~~L~~~g~~~~i~S~~~~~~i-~~~L~~~~gl~~~f~~---iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~  147 (362)
                      ++-....+++|++.+. +.++||.+..+- .... .-.|-..+..+   ...-+-...|||++.++..++++.+++|++|
T Consensus       167 y~KL~kA~~yLqnP~c-lflatn~D~~~p~~~~~-~ipG~G~~v~av~~~t~R~P~v~GKP~~~m~~~l~~~~~i~psRt  244 (306)
T KOG2882|consen  167 YPKLMKALNYLQNPGC-LFLATNRDATTPPTPGV-EIPGAGSFVAAVKFATGRQPIVLGKPSTFMFEYLLEKFNIDPSRT  244 (306)
T ss_pred             HHHHHHHHHHhCCCCc-EEEeccCccccCCCCCe-eccCCccHHHHHHHHhcCCCeecCCCCHHHHHHHHHHcCCCcceE
Confidence            4456667888887765 567777665322 0000 00111111111   1222344478999999999999999999999


Q ss_pred             EEEecCH-hhHHHHHHcCCEEEEEcCCCC
Q 017995          148 LVIEDSV-IGVVAGKAAGMEVVAVPSLPK  175 (362)
Q Consensus       148 l~igDs~-~d~~aA~~aG~~~i~v~~~~~  175 (362)
                      +||||+. +|+.-|++.|+++++|-++..
T Consensus       245 ~mvGDRL~TDIlFG~~~G~~TLLvltGv~  273 (306)
T KOG2882|consen  245 CMVGDRLDTDILFGKNCGFKTLLVLSGVT  273 (306)
T ss_pred             EEEcccchhhhhHhhccCcceEEEecCcC
Confidence            9999999 999999999999999988643

>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases

Probab=98.04  E-value=5e-05  Score=64.94  Aligned_cols=96  Identities=23%  Similarity=0.248  Sum_probs=70.9

Q ss_pred             cCCCCCchHHHHHHHHHHCCCc--EEEEcCCC-------hHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHH
Q 017995           67 CKVKALPGANRLIKHLSCHGVP--MALASNSH-------RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAA  137 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g~~--~~i~S~~~-------~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~  137 (362)
                      ....+.|.+.+.++.|++.+..  +.|+||+.       ...++. +.+.+|+    ..+...    ..||  ..+..++
T Consensus        56 ~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~-~~~~lgI----pvl~h~----~kKP--~~~~~i~  124 (168)
T PF09419_consen   56 YEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEA-LEKALGI----PVLRHR----AKKP--GCFREIL  124 (168)
T ss_pred             CcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHH-HHHhhCC----cEEEeC----CCCC--ccHHHHH
Confidence            3467788999999999998775  99999984       444443 3366775    333221    3466  5555555


Q ss_pred             HHcC-----CCCCcEEEEecCH-hhHHHHHHcCCEEEEEcCC
Q 017995          138 KRLN-----MEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSL  173 (362)
Q Consensus       138 ~~~~-----~~p~~~l~igDs~-~d~~aA~~aG~~~i~v~~~  173 (362)
                      +.++     ..|++++||||.. +|+.+|...|+.+|++..+
T Consensus       125 ~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~~g  166 (168)
T PF09419_consen  125 KYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTILVTDG  166 (168)
T ss_pred             HHHhhccCCCCchhEEEEcchHHHHHHHhhccCceEEEEecC
Confidence            5554     3599999999999 9999999999999998764

All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.

>PRK10671 copA copper exporting ATPase; Provisional

Probab=98.01  E-value=2e-05  Score=84.49  Aligned_cols=87  Identities=17%  Similarity=0.173  Sum_probs=72.4

Q ss_pred             CCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEE
Q 017995           69 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL  148 (362)
Q Consensus        69 ~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l  148 (362)
                      -+++||+.+.|+.|++.|+++.++|+..+..++... +.+|+.++|    .+       -.|+.-..++++++..+.+|+
T Consensus       649 d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia-~~lgi~~~~----~~-------~~p~~K~~~i~~l~~~~~~v~  716 (834)
T PRK10671        649 DPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIA-KEAGIDEVI----AG-------VLPDGKAEAIKRLQSQGRQVA  716 (834)
T ss_pred             CcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HHcCCCEEE----eC-------CCHHHHHHHHHHHhhcCCEEE
Confidence            468999999999999999999999999999988888 889985433    22       123444567777888889999


Q ss_pred             EEecCHhhHHHHHHcCCEE
Q 017995          149 VIEDSVIGVVAGKAAGMEV  167 (362)
Q Consensus       149 ~igDs~~d~~aA~~aG~~~  167 (362)
                      ||||+.+|+.+++++|+.+
T Consensus       717 ~vGDg~nD~~al~~Agvgi  735 (834)
T PRK10671        717 MVGDGINDAPALAQADVGI  735 (834)
T ss_pred             EEeCCHHHHHHHHhCCeeE
Confidence            9999999999999999954

>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase

Probab=97.97  E-value=2.4e-05  Score=84.32  Aligned_cols=98  Identities=20%  Similarity=0.224  Sum_probs=83.5

Q ss_pred             CCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCC----------------CCCCCHHHH
Q 017995           70 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR----------------TGKPSPDIF  133 (362)
Q Consensus        70 ~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~----------------~gKp~p~~~  133 (362)
                      +++||+.++++.|++.|+++.++|+.....+.... +.+|+...++.+++|.+..                +++..|+.-
T Consensus       528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia-~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K  606 (884)
T TIGR01522       528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIA-RRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHK  606 (884)
T ss_pred             cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHH
Confidence            68999999999999999999999999999988877 8899988777777776553                345777777


Q ss_pred             HHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 017995          134 LEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV  168 (362)
Q Consensus       134 ~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i  168 (362)
                      ..+.+.++-....+.|+||+.+|+.+.++|++.+.
T Consensus       607 ~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia  641 (884)
T TIGR01522       607 MKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVA  641 (884)
T ss_pred             HHHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEe
Confidence            77777777777899999999999999999996543

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.

>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5

Probab=97.94  E-value=9.8e-06  Score=77.15  Aligned_cols=69  Identities=14%  Similarity=0.133  Sum_probs=52.9

Q ss_pred             CCCCCCHHHHHHHHHHc--------CC-----CCCcEEEEecCH-hhHHHHHHcCCEEEEEcCCCCcccc---ccchhHh
Q 017995          124 RTGKPSPDIFLEAAKRL--------NM-----EPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHR---YTAADEV  186 (362)
Q Consensus       124 ~~gKp~p~~~~~~~~~~--------~~-----~p~~~l~igDs~-~d~~aA~~aG~~~i~v~~~~~~~~~---~ssa~~v  186 (362)
                      ..|||+|.+|..+++.+        +.     ++++++||||+. +|+.+|+++|+.++.|.++......   ...++.+
T Consensus       230 ~~GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~~~~~~~~~~~~p~~v  309 (321)
T TIGR01456       230 TLGKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTGVYNGGDDLKECKPTLI  309 (321)
T ss_pred             EcCCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEecccccCCCCCCCCCCCCEE
Confidence            46999999999998887        43     457999999999 9999999999999999886322211   1124566


Q ss_pred             hccccc
Q 017995          187 INSLLD  192 (362)
Q Consensus       187 i~~l~e  192 (362)
                      +.++.+
T Consensus       310 v~~l~e  315 (321)
T TIGR01456       310 VNDVFD  315 (321)
T ss_pred             ECCHHH
Confidence            666665

The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.

>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=97.90  E-value=0.0002  Score=61.68  Aligned_cols=93  Identities=18%  Similarity=0.186  Sum_probs=69.4

Q ss_pred             cCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcC--CC--------cEEEeCCCCC----CCCCCHHH
Q 017995           67 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE--SF--------SVIVGSDEVR----TGKPSPDI  132 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~--~f--------~~iv~~~d~~----~gKp~p~~  132 (362)
                      +..++.||++++...|+++|..++++|+..+.++..+- ..+||..  .+        +.=+.+.|..    .+-..++.
T Consensus        85 ~k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va-~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~  163 (227)
T KOG1615|consen   85 QKPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVA-EQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEV  163 (227)
T ss_pred             CCCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHH-HHhCCcHhhhhhheeeeccCCcccccccCCccccCCccHHH
Confidence            46889999999999999999999999999999998776 7788753  11        1112221211    22335666


Q ss_pred             HHHHHHHcCCCCCcEEEEecCHhhHHHHHH
Q 017995          133 FLEAAKRLNMEPSSSLVIEDSVIGVVAGKA  162 (362)
Q Consensus       133 ~~~~~~~~~~~p~~~l~igDs~~d~~aA~~  162 (362)
                      +....+  +.+-..++||||..+|+.+...
T Consensus       164 i~~lrk--~~~~~~~~mvGDGatDlea~~p  191 (227)
T KOG1615|consen  164 IALLRK--NYNYKTIVMVGDGATDLEAMPP  191 (227)
T ss_pred             HHHHHh--CCChheeEEecCCccccccCCc
Confidence            766555  8888999999999999998555

>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []

Probab=97.88  E-value=0.00017  Score=65.19  Aligned_cols=106  Identities=19%  Similarity=0.249  Sum_probs=79.6

Q ss_pred             hhcCCCCCchHHHHHHHH--HHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCC----CC-----------CCCC
Q 017995           65 HLCKVKALPGANRLIKHL--SCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD----EV-----------RTGK  127 (362)
Q Consensus        65 ~~~~~~~~pgv~~~L~~L--~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~----d~-----------~~gK  127 (362)
                      ....+++.||+.++++.+  .+.|+.+.|+|.+..-|++.+| ++.|+.+.|+.|++-.    +-           .+..
T Consensus        66 ~l~~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL-~~~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~  144 (234)
T PF06888_consen   66 ALRSIPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETIL-EHHGLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSL  144 (234)
T ss_pred             HHHcCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHH-HhCCCccccceEEeCCceecCCceEEEeCccCCCCCc
Confidence            346789999999999999  4589999999999999999999 8999999998887641    10           0111


Q ss_pred             -C----CHHHHHHHHHH---cCCCCCcEEEEecCHhhHHHHHHcCCEEEEEc
Q 017995          128 -P----SPDIFLEAAKR---LNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVP  171 (362)
Q Consensus       128 -p----~p~~~~~~~~~---~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~  171 (362)
                       |    +-.++...+..   -|+.-++++||||+.+|.=.+.+.+-.=++.+
T Consensus       145 C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~~  196 (234)
T PF06888_consen  145 CPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVFP  196 (234)
T ss_pred             CCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEec
Confidence             1    23445554444   36778999999999999998887765433333

It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity

>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB

Probab=97.87  E-value=0.00029  Score=62.91  Aligned_cols=103  Identities=13%  Similarity=0.074  Sum_probs=69.7

Q ss_pred             CCCCCchHHHHHH-HHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCC-CCCC-CC----C--CHHHHHHHHH
Q 017995           68 KVKALPGANRLIK-HLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD-EVRT-GK----P--SPDIFLEAAK  138 (362)
Q Consensus        68 ~~~~~pgv~~~L~-~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~-d~~~-gK----p--~p~~~~~~~~  138 (362)
                      ...++||+.++|+ .++++|++++|+|++++..++... +..++..- +.+++.. ++.. |+    +  .++=...+.+
T Consensus        92 ~~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia-~~~~~~~~-~~~i~t~le~~~gg~~~g~~c~g~~Kv~rl~~  169 (210)
T TIGR01545        92 KVTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVY-FDSNFIHR-LNLIASQIERGNGGWVLPLRCLGHEKVAQLEQ  169 (210)
T ss_pred             hCCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHH-Hhcccccc-CcEEEEEeEEeCCceEcCccCCChHHHHHHHH
Confidence            3578999999995 899999999999999999998777 55444332 3444432 2211 11    1  0111222223


Q ss_pred             HcCCCCCcEEEEecCHhhHHHHHHcCCEEEEEcC
Q 017995          139 RLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS  172 (362)
Q Consensus       139 ~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~~  172 (362)
                      .++.+...+.+-|||.+|+..-.-+|-++++-+.
T Consensus       170 ~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp~  203 (210)
T TIGR01545       170 KIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVSKR  203 (210)
T ss_pred             HhCCChhheEEecCCcccHHHHHhCCCcEEECcc
Confidence            3455667788999999999999999888765443

The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.

>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain

Probab=97.81  E-value=4.1e-05  Score=65.02  Aligned_cols=83  Identities=18%  Similarity=0.127  Sum_probs=65.1

Q ss_pred             CCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcC-CC-cEEEeCCCCCCCCCCHHHHHHHH-HHcCCCC
Q 017995           68 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE-SF-SVIVGSDEVRTGKPSPDIFLEAA-KRLNMEP  144 (362)
Q Consensus        68 ~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~-~f-~~iv~~~d~~~gKp~p~~~~~~~-~~~~~~p  144 (362)
                      .+.++||+.++|+.|++. +.++|+|++++..+..++ +.++... +| +.+++.+++.  .+.    .+-+ ..++.+.
T Consensus        56 ~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl-~~ldp~~~~F~~ri~~rd~~~--~~~----~KdL~~i~~~d~  127 (156)
T TIGR02250        56 LTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIA-KLIDPDGKYFGDRIISRDESG--SPH----TKSLLRLFPADE  127 (156)
T ss_pred             EEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHH-HHhCcCCCeeccEEEEeccCC--CCc----cccHHHHcCCCc
Confidence            578899999999999965 999999999999999988 8889884 88 6677777764  111    1223 3357788


Q ss_pred             CcEEEEecCHhhHH
Q 017995          145 SSSLVIEDSVIGVV  158 (362)
Q Consensus       145 ~~~l~igDs~~d~~  158 (362)
                      +.+++|+|++.-..
T Consensus       128 ~~vvivDd~~~~~~  141 (156)
T TIGR02250       128 SMVVIIDDREDVWP  141 (156)
T ss_pred             ccEEEEeCCHHHhh
Confidence            99999999984444

This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.

>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family

Probab=97.81  E-value=0.00014  Score=67.12  Aligned_cols=85  Identities=13%  Similarity=0.213  Sum_probs=65.1

Q ss_pred             cCCCCCchHHHHHHHHHHCCCcEEEEcCCChHh---HHHHHHhhcCCcCC-CcEEEeCCCCCCCCCCHHHHHHHHHHcCC
Q 017995           67 CKVKALPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQHGWNES-FSVIVGSDEVRTGKPSPDIFLEAAKRLNM  142 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~---i~~~L~~~~gl~~~-f~~iv~~~d~~~gKp~p~~~~~~~~~~~~  142 (362)
                      ....++||+.++|+.|+++|++++++|+.+...   ....| +.+|+... ++.++..++   +++.+..+..+.+..++
T Consensus       115 ~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~L-kk~Gi~~~~~d~lllr~~---~~~K~~rr~~I~~~y~I  190 (266)
T TIGR01533       115 AQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNL-KRFGFPQADEEHLLLKKD---KSSKESRRQKVQKDYEI  190 (266)
T ss_pred             CCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHH-HHcCcCCCCcceEEeCCC---CCCcHHHHHHHHhcCCE
Confidence            467899999999999999999999999987543   33556 77888753 467776653   24556677776666555


Q ss_pred             CCCcEEEEecCHhhHHH
Q 017995          143 EPSSSLVIEDSVIGVVA  159 (362)
Q Consensus       143 ~p~~~l~igDs~~d~~a  159 (362)
                          +++|||...|+..
T Consensus       191 ----vl~vGD~~~Df~~  203 (266)
T TIGR01533       191 ----VLLFGDNLLDFDD  203 (266)
T ss_pred             ----EEEECCCHHHhhh
Confidence                8999999999964

which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.

>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B

Probab=97.78  E-value=9e-05  Score=64.54  Aligned_cols=85  Identities=21%  Similarity=0.383  Sum_probs=62.2

Q ss_pred             chHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCC----------C---CCHHHHHHH---
Q 017995           73 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTG----------K---PSPDIFLEA---  136 (362)
Q Consensus        73 pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~g----------K---p~p~~~~~~---  136 (362)
                      |++.++|+.++++|+++.|+|.++..+++.++ +.+|+...+  +++..-+..+          .   .....+..+   
T Consensus        92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~-~~~~i~~~~--v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~  168 (192)
T PF12710_consen   92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIA-ERLGIDDDN--VIGNELFDNGGGIFTGRITGSNCGGKAEALKELYIR  168 (192)
T ss_dssp             TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHH-HHTTSSEGG--EEEEEEECTTCCEEEEEEEEEEESHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHH-HHcCCCceE--EEEEeeeecccceeeeeECCCCCCcHHHHHHHHHHH
Confidence            66669999999999999999999999999888 788875421  3332221111          0   134555555   


Q ss_pred             HHHcCCCCCcEEEEecCHhhHHHHH
Q 017995          137 AKRLNMEPSSSLVIEDSVIGVVAGK  161 (362)
Q Consensus       137 ~~~~~~~p~~~l~igDs~~d~~aA~  161 (362)
                      ... +..+..+++|||+.+|+.+++
T Consensus       169 ~~~-~~~~~~~~~iGDs~~D~~~lr  192 (192)
T PF12710_consen  169 DEE-DIDPDRVIAIGDSINDLPMLR  192 (192)
T ss_dssp             HHH-THTCCEEEEEESSGGGHHHHH
T ss_pred             hhc-CCCCCeEEEEECCHHHHHHhC
Confidence            334 788999999999999998865

>COG4087 Soluble P-type ATPase [General function prediction only]

Probab=97.70  E-value=0.00026  Score=57.01  Aligned_cols=115  Identities=12%  Similarity=0.171  Sum_probs=89.5

Q ss_pred             cCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCc
Q 017995           67 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS  146 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~  146 (362)
                      ..-++|+.+.+.++.|++. +.+.|+|.....++.+.. +-.|+.-  +.+..+       .+++.=...++.++-+-+.
T Consensus        27 tgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~la-e~~gi~~--~rv~a~-------a~~e~K~~ii~eLkk~~~k   95 (152)
T COG4087          27 TGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLA-EFVGIPV--ERVFAG-------ADPEMKAKIIRELKKRYEK   95 (152)
T ss_pred             cCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHH-HHcCCce--eeeecc-------cCHHHHHHHHHHhcCCCcE
Confidence            3578999999999999999 999999999999988777 6667532  334333       3456667777778877799


Q ss_pred             EEEEecCHhhHHHHHHcCCEEEEEcCCCCccccccchhHhhccccc
Q 017995          147 SLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD  192 (362)
Q Consensus       147 ~l~igDs~~d~~aA~~aG~~~i~v~~~~~~~~~~ssa~~vi~~l~e  192 (362)
                      |+||||..+|+.+-+++...++.+............++.++++..+
T Consensus        96 ~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e  141 (152)
T COG4087          96 VVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKEIAE  141 (152)
T ss_pred             EEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHHH
Confidence            9999999999999999999988887633333334466888887776

>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional

Probab=97.68  E-value=8.7e-05  Score=68.59  Aligned_cols=94  Identities=12%  Similarity=0.059  Sum_probs=64.0

Q ss_pred             CCCchHHHHHHHHHHCCCcEEEEcCCCh-----HhHHHHHHhhcCCcCCCcEEEeC----CCCCCCCCCHHHHHHHHHHc
Q 017995           70 KALPGANRLIKHLSCHGVPMALASNSHR-----ATIESKISYQHGWNESFSVIVGS----DEVRTGKPSPDIFLEAAKRL  140 (362)
Q Consensus        70 ~~~pgv~~~L~~L~~~g~~~~i~S~~~~-----~~i~~~L~~~~gl~~~f~~iv~~----~d~~~gKp~p~~~~~~~~~~  140 (362)
                      ..++++.+++..++..+..+.++++.+.     .+.+... +.+++.    ...++    +-...+-..+..+..+++++
T Consensus       137 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~----~~~s~~~~~ei~~~~~~K~~~l~~l~~~~  211 (272)
T PRK10530        137 PTFTQVDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHVE-HELGLE----CEWSWHDQVDIARKGNSKGKRLTQWVEAQ  211 (272)
T ss_pred             cceEEcccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHHh-hhcCce----EEEecCceEEEecCCCChHHHHHHHHHHc
Confidence            3467788888888877777777777542     2333333 444432    11111    11112333567899999999


Q ss_pred             CCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 017995          141 NMEPSSSLVIEDSVIGVVAGKAAGMEVV  168 (362)
Q Consensus       141 ~~~p~~~l~igDs~~d~~aA~~aG~~~i  168 (362)
                      |+++++|++|||+.+|+.+++.+|+.+.
T Consensus       212 gi~~~e~i~~GD~~NDi~m~~~ag~~va  239 (272)
T PRK10530        212 GWSMKNVVAFGDNFNDISMLEAAGLGVA  239 (272)
T ss_pred             CCCHHHeEEeCCChhhHHHHHhcCceEE
Confidence            9999999999999999999999998553

>PLN02645 phosphoglycolate phosphatase

Probab=97.62  E-value=0.0004  Score=65.87  Aligned_cols=91  Identities=15%  Similarity=0.131  Sum_probs=69.6

Q ss_pred             CCCCchHHHHHHHHHHCCCcEEEEcCCChHh---HHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 017995           69 VKALPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS  145 (362)
Q Consensus        69 ~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~---i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~  145 (362)
                      -.++||+.++|+.|+++|+++.++||++...   +...| +.+|+...++.|+++..         .....++..+....
T Consensus        43 ~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l-~~lGi~~~~~~I~ts~~---------~~~~~l~~~~~~~~  112 (311)
T PLN02645         43 DKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKF-ESLGLNVTEEEIFSSSF---------AAAAYLKSINFPKD  112 (311)
T ss_pred             CccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHH-HHCCCCCChhhEeehHH---------HHHHHHHhhccCCC
Confidence            4689999999999999999999999988333   33345 67888777777777642         34445555565555


Q ss_pred             cEEEEecCHhhHHHHHHcCCEEEE
Q 017995          146 SSLVIEDSVIGVVAGKAAGMEVVA  169 (362)
Q Consensus       146 ~~l~igDs~~d~~aA~~aG~~~i~  169 (362)
                      ..++++++..+.+.++++|+.++.
T Consensus       113 ~~V~viG~~~~~~~l~~~Gi~~~~  136 (311)
T PLN02645        113 KKVYVIGEEGILEELELAGFQYLG  136 (311)
T ss_pred             CEEEEEcCHHHHHHHHHCCCEEec
Confidence            678888889999999999998765

>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3

Probab=97.54  E-value=0.00037  Score=68.87  Aligned_cols=104  Identities=20%  Similarity=0.269  Sum_probs=70.6

Q ss_pred             CCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhc--------CCcCCCcEEEeCCC-----------------C
Q 017995           69 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQH--------GWNESFSVIVGSDE-----------------V  123 (362)
Q Consensus        69 ~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~--------gl~~~f~~iv~~~d-----------------~  123 (362)
                      +..-|.+..+|+.|+++|-++.++||++-+++...+.-.+        ++.++||.||++..                 .
T Consensus       182 i~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr~vd~~~  261 (448)
T PF05761_consen  182 IHKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFREVDTET  261 (448)
T ss_dssp             EE--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCHHHCT---EEEEETTT
T ss_pred             ccCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCcccCCCCceEEEECCC
Confidence            4556799999999999999999999999999998873223        57789999998642                 0


Q ss_pred             C---CCC-------C---CHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHc-CCEEEEEcC
Q 017995          124 R---TGK-------P---SPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAA-GMEVVAVPS  172 (362)
Q Consensus       124 ~---~gK-------p---~p~~~~~~~~~~~~~p~~~l~igDs~-~d~~aA~~a-G~~~i~v~~  172 (362)
                      +   .++       +   .-+......+.+|....++++|||+. .|+..++.. |++++.|-+
T Consensus       262 g~l~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii~  325 (448)
T PF05761_consen  262 GKLKWGKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKKRHGWRTAAIIP  325 (448)
T ss_dssp             SSEECS---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESSTTTTHHHHHHHH-SEEEEE-T
T ss_pred             CccccccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCchhhhhhhhccccceEEEEEeh
Confidence            0   111       1   12335566677889999999999999 899887766 999998865

1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....

>COG4359 Uncharacterized conserved protein [Function unknown]

Probab=97.54  E-value=0.00076  Score=57.57  Aligned_cols=93  Identities=19%  Similarity=0.214  Sum_probs=66.6

Q ss_pred             cCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCc-----------------EEEeCCCCCCCCCC
Q 017995           67 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS-----------------VIVGSDEVRTGKPS  129 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~-----------------~iv~~~d~~~gKp~  129 (362)
                      ..+++.||.++++++++++++++.|+|++-..++..++ +++.-.+..+                 .|+.-+|-.+|-..
T Consensus        70 k~i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lf-e~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~dK  148 (220)
T COG4359          70 KDIKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLF-EGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHDK  148 (220)
T ss_pred             hhcccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHH-HhhccccceeeeEEeecCceEcCCCceeeecCCccccCCCc
Confidence            45899999999999999999999999999999999888 5543111111                 12223333344333


Q ss_pred             HHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcC
Q 017995          130 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG  164 (362)
Q Consensus       130 p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG  164 (362)
                      +....    .+.-+++.++|+||+..|+.||+...
T Consensus       149 ~~vI~----~l~e~~e~~fy~GDsvsDlsaaklsD  179 (220)
T COG4359         149 SSVIH----ELSEPNESIFYCGDSVSDLSAAKLSD  179 (220)
T ss_pred             chhHH----HhhcCCceEEEecCCcccccHhhhhh
Confidence            44443    34456788999999999999988753

>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional

Probab=97.53  E-value=0.00054  Score=72.47  Aligned_cols=87  Identities=16%  Similarity=0.149  Sum_probs=66.7

Q ss_pred             CCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEE
Q 017995           69 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL  148 (362)
Q Consensus        69 ~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l  148 (362)
                      -+++||+.++|+.|+++|+++.++|+.....++.+. +.+|+..++      ..    .  |+-=..++++++ .+..|+
T Consensus       567 d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia-~~lgi~~~~------~~----~--p~~K~~~v~~l~-~~~~v~  632 (741)
T PRK11033        567 DTLRADARQAISELKALGIKGVMLTGDNPRAAAAIA-GELGIDFRA------GL----L--PEDKVKAVTELN-QHAPLA  632 (741)
T ss_pred             cCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-HHcCCCeec------CC----C--HHHHHHHHHHHh-cCCCEE
Confidence            478999999999999999999999999999998887 889984221      11    1  222222344444 346899


Q ss_pred             EEecCHhhHHHHHHcCCEEEE
Q 017995          149 VIEDSVIGVVAGKAAGMEVVA  169 (362)
Q Consensus       149 ~igDs~~d~~aA~~aG~~~i~  169 (362)
                      ||||+.+|..+.+.+++.+..
T Consensus       633 mvGDgiNDapAl~~A~vgia~  653 (741)
T PRK11033        633 MVGDGINDAPAMKAASIGIAM  653 (741)
T ss_pred             EEECCHHhHHHHHhCCeeEEe
Confidence            999999999999999965543

>PHA03398 viral phosphatase superfamily protein; Provisional

Probab=97.51  E-value=0.00024  Score=65.72  Aligned_cols=55  Identities=16%  Similarity=0.220  Sum_probs=49.8

Q ss_pred             CCCC-chHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCC
Q 017995           69 VKAL-PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR  124 (362)
Q Consensus        69 ~~~~-pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~  124 (362)
                      +++. |++.++|+.|+++|++++|+|+++++.+...| +.+|+.++|+.|+++++..
T Consensus       146 v~irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~L-e~lgL~~yFDvII~~g~i~  201 (303)
T PHA03398        146 VRIRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSL-KETKLEGYFDIIICGGRKA  201 (303)
T ss_pred             cccCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHH-HHcCCCccccEEEECCCcc
Confidence            4445 99999999999999999999999999999888 8999999999999988775

>COG4996 Predicted phosphatase [General function prediction only]

Probab=97.47  E-value=0.00035  Score=56.26  Aligned_cols=85  Identities=21%  Similarity=0.257  Sum_probs=66.9

Q ss_pred             cCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHH---HHH-----
Q 017995           67 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLE---AAK-----  138 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~---~~~-----  138 (362)
                      ..+.++|.|.++|+++++.|+-++.+|-+...-+-+.| ..+++..+|+.+|.       +|+|.-++.   .++     
T Consensus        38 ~ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aL-ral~~~~yFhy~Vi-------ePhP~K~~ML~~llr~i~~e  109 (164)
T COG4996          38 REVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKAL-RALDLLQYFHYIVI-------EPHPYKFLMLSQLLREINTE  109 (164)
T ss_pred             eEEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHH-HHhchhhhEEEEEe-------cCCChhHHHHHHHHHHHHHh
Confidence            35889999999999999999999999988888777788 88999999999886       455443332   222     


Q ss_pred             -HcCCCCCcEEEEecCHhhHHH
Q 017995          139 -RLNMEPSSSLVIEDSVIGVVA  159 (362)
Q Consensus       139 -~~~~~p~~~l~igDs~~d~~a  159 (362)
                       ...+.|++++++.|...-+.-
T Consensus       110 r~~~ikP~~Ivy~DDR~iH~~~  131 (164)
T COG4996         110 RNQKIKPSEIVYLDDRRIHFGN  131 (164)
T ss_pred             hccccCcceEEEEecccccHHH
Confidence             234799999999999844443

>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]

Probab=97.43  E-value=0.00024  Score=59.09  Aligned_cols=84  Identities=19%  Similarity=0.302  Sum_probs=70.9

Q ss_pred             HHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHH
Q 017995           79 IKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVV  158 (362)
Q Consensus        79 L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~  158 (362)
                      ++.|.+.|++++|+|......++... +.+|+    ++++-|.     +..-..|.+.++++++.+++|.+|||...|+.
T Consensus        44 ik~l~~~Gi~vAIITGr~s~ive~Ra-~~LGI----~~~~qG~-----~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlp  113 (170)
T COG1778          44 IKLLLKSGIKVAIITGRDSPIVEKRA-KDLGI----KHLYQGI-----SDKLAAFEELLKKLNLDPEEVAYVGDDLVDLP  113 (170)
T ss_pred             HHHHHHcCCeEEEEeCCCCHHHHHHH-HHcCC----ceeeech-----HhHHHHHHHHHHHhCCCHHHhhhhcCccccHH
Confidence            56777799999999999999999888 88998    4444432     23458899999999999999999999999999


Q ss_pred             HHHHcCCEEEEEcC
Q 017995          159 AGKAAGMEVVAVPS  172 (362)
Q Consensus       159 aA~~aG~~~i~v~~  172 (362)
                      .-.+.|+.++.-+.
T Consensus       114 vm~~vGls~a~~dA  127 (170)
T COG1778         114 VMEKVGLSVAVADA  127 (170)
T ss_pred             HHHHcCCccccccc
Confidence            99999999876544

>cd02169 Citrate_lyase_ligase Citrate lyase ligase

Probab=97.30  E-value=0.00027  Score=66.34  Aligned_cols=80  Identities=11%  Similarity=-0.036  Sum_probs=58.7

Q ss_pred             EEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEEE
Q 017995           91 LASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV  170 (362)
Q Consensus        91 i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v  170 (362)
                      +++.++++|++ +|.+.++.    ..|++|+|+++|+..... ...++                    .+++.|+.++.+
T Consensus       205 ~a~lsa~~Fi~-iL~~~l~~----~~ivvG~Df~FG~~r~G~-~~l~~--------------------~~~~~gf~v~~v  258 (297)
T cd02169         205 QTALDARIFRK-YIAPALNI----TKRYVGEEPFSRVTAIYN-QTMQE--------------------ELLSPAIEVIEI  258 (297)
T ss_pred             HhcCCHHHHHH-HHHHHcCC----cEEEEcCCCCCCCcchhH-HHHHH--------------------hcccCCCEEEEe
Confidence            44557889998 77566776    899999999999877665 33322                    256789999999


Q ss_pred             cCCCCccccccchhHhhcccccccccc
Q 017995          171 PSLPKQTHRYTAADEVINSLLDLRPEK  197 (362)
Q Consensus       171 ~~~~~~~~~~ssa~~vi~~l~el~~~~  197 (362)
                      +....++..+|| +.+++.+.+++++.
T Consensus       259 ~~~~~~g~~ISS-T~IR~~l~~G~v~~  284 (297)
T cd02169         259 ERKKYDGQPISA-STVRQLLKEGNLEE  284 (297)
T ss_pred             cccccCCcEEcH-HHHHHHHHcCCHHH
Confidence            987777777754 66666666787764

Citrate lyase ligase, also known as [Citrate (pro-3S)-lyase] ligase, is responsible for acetylation of the (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) prosthetic group of the gamma subunit of citrate lyase, converting the inactive thiol form of this enzyme to the active form. The acetylation of 1 molecule of deacetyl-citrate lyase to enzymatically active citrate lyase requires 6 molecules of ATP. The Adenylylyltranferase activity of the enzyme involves the formation of AMP and and pyrophosphate in the acetylation reaction.

>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]

Probab=97.08  E-value=0.0036  Score=55.42  Aligned_cols=104  Identities=17%  Similarity=0.158  Sum_probs=81.8

Q ss_pred             CCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCC-CCCHHHHHHHHHHcCCCCCc
Q 017995           68 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTG-KPSPDIFLEAAKRLNMEPSS  146 (362)
Q Consensus        68 ~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~g-Kp~p~~~~~~~~~~~~~p~~  146 (362)
                      ....++++...++..+..|+++.|.|+........++ ..-+-.+.-+.+-+-.|...| |-....|..+.+.+|.++.+
T Consensus       121 k~~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllf-g~s~~gdl~~y~~gyfDt~iG~K~e~~sy~~I~~~Ig~s~~e  199 (254)
T KOG2630|consen  121 KAHVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLF-GYSDAGDLRKYISGYFDTTIGLKVESQSYKKIGHLIGKSPRE  199 (254)
T ss_pred             cccccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHH-cccCcchHHHHhhhhhhccccceehhHHHHHHHHHhCCChhh
Confidence            4578999999999999999999999999888665444 322211211233334455555 66789999999999999999


Q ss_pred             EEEEecCHhhHHHHHHcCCEEEEEcC
Q 017995          147 SLVIEDSVIGVVAGKAAGMEVVAVPS  172 (362)
Q Consensus       147 ~l~igDs~~d~~aA~~aG~~~i~v~~  172 (362)
                      .+++-|.+....+|+.+|+.+..+..
T Consensus       200 iLfLTd~~~Ea~aa~~aGl~a~l~~r  225 (254)
T KOG2630|consen  200 ILFLTDVPREAAAARKAGLQAGLVSR  225 (254)
T ss_pred             eEEeccChHHHHHHHhcccceeeeec
Confidence            99999999999999999999877654

>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase

Probab=96.97  E-value=0.0025  Score=69.07  Aligned_cols=100  Identities=15%  Similarity=0.087  Sum_probs=74.0

Q ss_pred             CCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCC----cEEEeCCCC----------------CCCCC
Q 017995           69 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF----SVIVGSDEV----------------RTGKP  128 (362)
Q Consensus        69 ~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f----~~iv~~~d~----------------~~gKp  128 (362)
                      -++.|++.+.++.|++.|+++.++|+.....+.... +.+|+...=    ...+.+.++                -+++-
T Consensus       536 Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia-~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~  614 (917)
T TIGR01116       536 DPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAIC-RRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRV  614 (917)
T ss_pred             CCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHH-HHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEec
Confidence            357999999999999999999999999988877766 788885311    112333221                13344


Q ss_pred             CHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEE
Q 017995          129 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA  169 (362)
Q Consensus       129 ~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~  169 (362)
                      .|+-=..+.+.++-..+.|.|+||+.+|+.+.++|++.+..
T Consensus       615 ~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~  655 (917)
T TIGR01116       615 EPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAM  655 (917)
T ss_pred             CHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEEC
Confidence            45555666666666678899999999999999999996543

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=96.89  E-value=0.0052  Score=54.95  Aligned_cols=71  Identities=18%  Similarity=0.155  Sum_probs=49.3

Q ss_pred             cCCChHhHHHHHHhhcCCc----CCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 017995           93 SNSHRATIESKISYQHGWN----ESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV  168 (362)
Q Consensus        93 S~~~~~~i~~~L~~~~gl~----~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i  168 (362)
                      ++.....+...+ ...++.    .+|..|....   ..|+  ..+..+++.+|+++++|++|||+.+|+.+.+.+|..+.
T Consensus       146 ~~~~~~~~~~~l-~~~~~~~~~~~~~~ei~~~~---~~Kg--~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va  219 (221)
T TIGR02463       146 SDSRMPRFTALL-ADLGLAIVQGNRFSHVLGAS---SSKG--KAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVV  219 (221)
T ss_pred             chhHHHHHHHHH-HHcCCeEEecCCeeEEecCC---CCHH--HHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEE
Confidence            344444555556 444554    3333333322   1243  56789999999999999999999999999999998875


Q ss_pred             E
Q 017995          169 A  169 (362)
Q Consensus       169 ~  169 (362)
                      +
T Consensus       220 ~  220 (221)
T TIGR02463       220 I  220 (221)
T ss_pred             e
Confidence            3

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>TIGR01497 kdpB K+-transporting ATPase, B subunit

Probab=96.80  E-value=0.0053  Score=63.87  Aligned_cols=90  Identities=13%  Similarity=0.111  Sum_probs=69.8

Q ss_pred             CCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEE
Q 017995           69 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL  148 (362)
Q Consensus        69 ~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l  148 (362)
                      -++.||+.+.++.|++.|+++.++|+.....+...- +.+|+.    .+++       .-.|+.=....+.++-....+.
T Consensus       445 D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA-~~lGI~----~v~a-------~~~PedK~~~v~~lq~~g~~Va  512 (675)
T TIGR01497       445 DIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIA-AEAGVD----DFIA-------EATPEDKIALIRQEQAEGKLVA  512 (675)
T ss_pred             ccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-HHcCCC----EEEc-------CCCHHHHHHHHHHHHHcCCeEE
Confidence            368999999999999999999999999999888777 888984    3332       1234444444444444456799


Q ss_pred             EEecCHhhHHHHHHcCCEEEEE
Q 017995          149 VIEDSVIGVVAGKAAGMEVVAV  170 (362)
Q Consensus       149 ~igDs~~d~~aA~~aG~~~i~v  170 (362)
                      |+||..+|..+-+++++.+..-
T Consensus       513 mvGDG~NDapAL~~AdvGiAm~  534 (675)
T TIGR01497       513 MTGDGTNDAPALAQADVGVAMN  534 (675)
T ss_pred             EECCCcchHHHHHhCCEeEEeC
Confidence            9999999999999999887653

One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.

>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A

Probab=96.75  E-value=0.0057  Score=47.87  Aligned_cols=87  Identities=18%  Similarity=0.146  Sum_probs=53.9

Q ss_pred             cCCCCCchHHHHHHHHHHCCCcEEEEcCCChH---hHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCC
Q 017995           67 CKVKALPGANRLIKHLSCHGVPMALASNSHRA---TIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME  143 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~---~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~  143 (362)
                      ....++||+.++|+.|+++|.++.++||++..   .....| +.+|+.-.-+.|+++.         ......+++. ..
T Consensus        11 ~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L-~~~Gi~~~~~~i~ts~---------~~~~~~l~~~-~~   79 (101)
T PF13344_consen   11 NGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKL-KKLGIPVDEDEIITSG---------MAAAEYLKEH-KG   79 (101)
T ss_dssp             ETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHH-HHTTTT--GGGEEEHH---------HHHHHHHHHH-TT
T ss_pred             eCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHH-HhcCcCCCcCEEEChH---------HHHHHHHHhc-CC
Confidence            35678999999999999999999999998632   233455 6788865446666643         2333333332 33


Q ss_pred             CCcEEEEecCHhhHHHHHHcCC
Q 017995          144 PSSSLVIEDSVIGVVAGKAAGM  165 (362)
Q Consensus       144 p~~~l~igDs~~d~~aA~~aG~  165 (362)
                      ..+++++|-. ...+..+++|+
T Consensus        80 ~~~v~vlG~~-~l~~~l~~~G~  100 (101)
T PF13344_consen   80 GKKVYVLGSD-GLREELREAGF  100 (101)
T ss_dssp             SSEEEEES-H-HHHHHHHHTTE
T ss_pred             CCEEEEEcCH-HHHHHHHHcCC
Confidence            5667777644 44455566665

...

>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=96.62  E-value=0.0054  Score=56.94  Aligned_cols=85  Identities=13%  Similarity=0.110  Sum_probs=56.8

Q ss_pred             HHHHCCCcEEEE---cCCChHhHHHHHHhhcCCc----CCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCC-CcEEEEec
Q 017995           81 HLSCHGVPMALA---SNSHRATIESKISYQHGWN----ESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP-SSSLVIED  152 (362)
Q Consensus        81 ~L~~~g~~~~i~---S~~~~~~i~~~L~~~~gl~----~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p-~~~l~igD  152 (362)
                      .++..++...++   +....+.+...+ ...++.    .+|..|+...      .....+..+++.+++++ ++|++|||
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~ei~~~~------~Kg~al~~l~~~~~i~~~~~v~~~GD  215 (273)
T PRK00192        143 LAKDREFSEPFLWNGSEAAKERFEEAL-KRLGLKVTRGGRFLHLLGGG------DKGKAVRWLKELYRRQDGVETIALGD  215 (273)
T ss_pred             HHHhcccCCceeecCchHHHHHHHHHH-HHcCCEEEECCeEEEEeCCC------CHHHHHHHHHHHHhccCCceEEEEcC
Confidence            344455554544   333344444455 444553    3333343332      23357888889999999 99999999


Q ss_pred             CHhhHHHHHHcCCEEEEEcC
Q 017995          153 SVIGVVAGKAAGMEVVAVPS  172 (362)
Q Consensus       153 s~~d~~aA~~aG~~~i~v~~  172 (362)
                      +.+|+.+++.+|+.++.-+.
T Consensus       216 s~NDi~m~~~ag~~vam~NA  235 (273)
T PRK00192        216 SPNDLPMLEAADIAVVVPGP  235 (273)
T ss_pred             ChhhHHHHHhCCeeEEeCCC
Confidence            99999999999999877654

>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=96.61  E-value=0.0053  Score=54.09  Aligned_cols=96  Identities=18%  Similarity=0.186  Sum_probs=69.7

Q ss_pred             cCCCCCchHHHHHHHHHHCCC-cEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCC------------------CCC-
Q 017995           67 CKVKALPGANRLIKHLSCHGV-PMALASNSHRATIESKISYQHGWNESFSVIVGSDEV------------------RTG-  126 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g~-~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~------------------~~g-  126 (362)
                      ..++.-||+.++++.+++.|- .+.|+|.+..-|++..| +++++.+.|..|.+-...                  ... 
T Consensus        81 r~iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~L-ea~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~CP  159 (256)
T KOG3120|consen   81 RSIPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEIL-EAAGIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNLCP  159 (256)
T ss_pred             hcCCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHH-HHccHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCcCc
Confidence            568999999999999999885 89999999999999999 899999988877653211                  000 


Q ss_pred             ----CCC-HHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHc
Q 017995          127 ----KPS-PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA  163 (362)
Q Consensus       127 ----Kp~-p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~a  163 (362)
                          |.. -+-|..-..+-|+.-++.+||||+.+|+-.-...
T Consensus       160 sNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~L  201 (256)
T KOG3120|consen  160 SNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRL  201 (256)
T ss_pred             hhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhc
Confidence                110 0112222234467778999999999988664433

>PRK14010 potassium-transporting ATPase subunit B; Provisional

Probab=96.45  E-value=0.017  Score=60.21  Aligned_cols=89  Identities=11%  Similarity=0.098  Sum_probs=71.3

Q ss_pred             CCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEE
Q 017995           69 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL  148 (362)
Q Consensus        69 ~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l  148 (362)
                      -++.||+.+.++.|++.|+++.++|+.....+..+- +.+|+.+    ++       ..-.|+.=....+.++-...-+.
T Consensus       440 Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA-~elGI~~----v~-------A~~~PedK~~iV~~lQ~~G~~Va  507 (673)
T PRK14010        440 DVIKDGLVERFRELREMGIETVMCTGDNELTAATIA-KEAGVDR----FV-------AECKPEDKINVIREEQAKGHIVA  507 (673)
T ss_pred             cCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCCce----EE-------cCCCHHHHHHHHHHHHhCCCEEE
Confidence            368999999999999999999999999999887766 8899853    22       23345665666666666667799


Q ss_pred             EEecCHhhHHHHHHcCCEEEE
Q 017995          149 VIEDSVIGVVAGKAAGMEVVA  169 (362)
Q Consensus       149 ~igDs~~d~~aA~~aG~~~i~  169 (362)
                      |+||..+|.-+-++|.+.+..
T Consensus       508 MtGDGvNDAPALa~ADVGIAM  528 (673)
T PRK14010        508 MTGDGTNDAPALAEANVGLAM  528 (673)
T ss_pred             EECCChhhHHHHHhCCEEEEe
Confidence            999999999999999877644

>PRK01122 potassium-transporting ATPase subunit B; Provisional

Probab=96.43  E-value=0.014  Score=60.92  Aligned_cols=90  Identities=14%  Similarity=0.144  Sum_probs=71.4

Q ss_pred             CCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEE
Q 017995           69 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL  148 (362)
Q Consensus        69 ~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l  148 (362)
                      -++.||+++.++.|++.|+++.++|+.....+..+- +.+|+++    ++       ..-.|+.=....+.++-...-+.
T Consensus       444 D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA-~elGId~----v~-------A~~~PedK~~iV~~lQ~~G~~Va  511 (679)
T PRK01122        444 DIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIA-AEAGVDD----FL-------AEATPEDKLALIRQEQAEGRLVA  511 (679)
T ss_pred             ccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCCcE----EE-------ccCCHHHHHHHHHHHHHcCCeEE
Confidence            357899999999999999999999999999887766 8889843    32       23345665666666665667799


Q ss_pred             EEecCHhhHHHHHHcCCEEEEE
Q 017995          149 VIEDSVIGVVAGKAAGMEVVAV  170 (362)
Q Consensus       149 ~igDs~~d~~aA~~aG~~~i~v  170 (362)
                      |+||..+|.-+-++|.+.+..=
T Consensus       512 MtGDGvNDAPALa~ADVGIAMg  533 (679)
T PRK01122        512 MTGDGTNDAPALAQADVGVAMN  533 (679)
T ss_pred             EECCCcchHHHHHhCCEeEEeC
Confidence            9999999999999998876543

>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily

Probab=96.40  E-value=0.0067  Score=54.24  Aligned_cols=78  Identities=19%  Similarity=0.218  Sum_probs=54.2

Q ss_pred             EEEEcCCChHhHHHHHHhhcCCcCCCcEEEeC----CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcC
Q 017995           89 MALASNSHRATIESKISYQHGWNESFSVIVGS----DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG  164 (362)
Q Consensus        89 ~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~----~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG  164 (362)
                      ..+.+....+.+...+ +.+++.  +. ++.+    +-...+.++...+..+++++|++++++++|||+.+|+.+.+.+|
T Consensus       110 ~~~~~~~~~~~~~~~~-~~~~~~--~~-~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag  185 (225)
T TIGR01482       110 VKMRYGIDVDTVREII-KELGLN--LV-AVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDSENDIDLFEVPG  185 (225)
T ss_pred             EEEeecCCHHHHHHHH-HhcCce--EE-EecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHHHhcC
Confidence            4455555555556555 555542  11 1111    11234456678899999999999999999999999999999999


Q ss_pred             CEEEEE
Q 017995          165 MEVVAV  170 (362)
Q Consensus       165 ~~~i~v  170 (362)
                      +.+.+-
T Consensus       186 ~~vam~  191 (225)
T TIGR01482       186 FGVAVA  191 (225)
T ss_pred             ceEEcC
Confidence            987554

catalyze the same reaction as SPP.

>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase

Probab=96.40  E-value=0.0088  Score=63.54  Aligned_cols=97  Identities=16%  Similarity=0.125  Sum_probs=72.8

Q ss_pred             CCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCC----------------------CCC
Q 017995           69 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEV----------------------RTG  126 (362)
Q Consensus        69 ~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~----------------------~~g  126 (362)
                      -++.|++.+.++.|++.|+++.++|+.....+..+- +.+|+.+.   ++++++.                      -+.
T Consensus       441 Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA-~~lGI~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfA  516 (755)
T TIGR01647       441 DPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETA-RRLGLGTN---IYTADVLLKGDNRDDLPSGELGEMVEDADGFA  516 (755)
T ss_pred             CCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCCCCC---CcCHHHhcCCcchhhCCHHHHHHHHHhCCEEE
Confidence            368899999999999999999999999999887766 88898541   2222222                      133


Q ss_pred             CCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEE
Q 017995          127 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA  169 (362)
Q Consensus       127 Kp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~  169 (362)
                      +-.|+-=....+.++-....+.|+||..+|.-|-++|.+.+..
T Consensus       517 r~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm  559 (755)
T TIGR01647       517 EVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAV  559 (755)
T ss_pred             ecCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEe
Confidence            4445554555555555667899999999999999999887554

This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.

>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=96.35  E-value=0.017  Score=60.50  Aligned_cols=87  Identities=21%  Similarity=0.257  Sum_probs=68.0

Q ss_pred             CCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEE
Q 017995           69 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL  148 (362)
Q Consensus        69 ~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l  148 (362)
                      -++.|++.+.++.|++.|+++.++|+..+..++.+- +.+|+++    +++       .-.|+-=....++++-....+.
T Consensus       536 D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA-~~lGId~----v~A-------ellPedK~~~V~~l~~~g~~Va  603 (713)
T COG2217         536 DELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIA-KELGIDE----VRA-------ELLPEDKAEIVRELQAEGRKVA  603 (713)
T ss_pred             CCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HHcChHh----hec-------cCCcHHHHHHHHHHHhcCCEEE
Confidence            568999999999999999999999999999888777 8898843    322       1223444555566665557899


Q ss_pred             EEecCHhhHHHHHHcCCEE
Q 017995          149 VIEDSVIGVVAGKAAGMEV  167 (362)
Q Consensus       149 ~igDs~~d~~aA~~aG~~~  167 (362)
                      ||||..+|.-+-..+.+.+
T Consensus       604 mVGDGINDAPALA~AdVGi  622 (713)
T COG2217         604 MVGDGINDAPALAAADVGI  622 (713)
T ss_pred             EEeCCchhHHHHhhcCeeE
Confidence            9999999999977776654

>PRK01158 phosphoglycolate phosphatase; Provisional

Probab=96.35  E-value=0.01  Score=53.31  Aligned_cols=78  Identities=15%  Similarity=0.165  Sum_probs=53.6

Q ss_pred             EEEcCCChHhHHHHHHhhcCCcCCCcEEEeCC--C-CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCE
Q 017995           90 ALASNSHRATIESKISYQHGWNESFSVIVGSD--E-VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME  166 (362)
Q Consensus        90 ~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~--d-~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~  166 (362)
                      .+.++...+.+...+ +..+.  .+..+.+..  + ...+..++..+..+++.+|+++++|++|||+.+|+.+++.+|+.
T Consensus       119 ~~~~~~~~~~~~~~l-~~~~~--~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~  195 (230)
T PRK01158        119 ALRRTVPVEEVRELL-EELGL--DLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFG  195 (230)
T ss_pred             eecccccHHHHHHHH-HHcCC--cEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCce
Confidence            344555555556666 44443  122222221  1 12344567899999999999999999999999999999999998


Q ss_pred             EEEE
Q 017995          167 VVAV  170 (362)
Q Consensus       167 ~i~v  170 (362)
                      +..-
T Consensus       196 vam~  199 (230)
T PRK01158        196 VAVA  199 (230)
T ss_pred             EEec
Confidence            7554

>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase

Probab=96.24  E-value=0.015  Score=63.45  Aligned_cols=99  Identities=15%  Similarity=0.071  Sum_probs=74.7

Q ss_pred             CCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCC----------------CCCCCHHHH
Q 017995           70 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR----------------TGKPSPDIF  133 (362)
Q Consensus        70 ~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~----------------~gKp~p~~~  133 (362)
                      ++.|++.++++.|++.|+++.++|+.....+..+- +.+|+.+.-..++.|.++.                +++-.|+-=
T Consensus       579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA-~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K  657 (941)
T TIGR01517       579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIA-RNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDK  657 (941)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHH-HHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHH
Confidence            68899999999999999999999999999887666 8889864323466665532                234455554


Q ss_pred             HHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEE
Q 017995          134 LEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA  169 (362)
Q Consensus       134 ~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~  169 (362)
                      ....+.++-...-+.|+||..+|.-|=++|.+.+..
T Consensus       658 ~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAm  693 (941)
T TIGR01517       658 QLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSM  693 (941)
T ss_pred             HHHHHHHHHCCCEEEEECCCCchHHHHHhCCcceec
Confidence            555555554556799999999999999998777643

The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.

>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase

Probab=96.24  E-value=0.016  Score=62.48  Aligned_cols=99  Identities=9%  Similarity=0.052  Sum_probs=73.2

Q ss_pred             CCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCC----------------CCCCCHHH
Q 017995           69 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR----------------TGKPSPDI  132 (362)
Q Consensus        69 ~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~----------------~gKp~p~~  132 (362)
                      -++.|++.+.++.|++.|+++.++|+.....+..+- +.+|+..  +.++.|.+..                +++-.|+-
T Consensus       514 Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA-~~lGI~~--~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~  590 (867)
T TIGR01524       514 DPPKESTKEAIAALFKNGINVKVLTGDNEIVTARIC-QEVGIDA--NDFLLGADIEELSDEELARELRKYHIFARLTPMQ  590 (867)
T ss_pred             CCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-HHcCCCC--CCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHH
Confidence            357899999999999999999999999998877666 8889853  2455554432                22334444


Q ss_pred             HHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEEE
Q 017995          133 FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV  170 (362)
Q Consensus       133 ~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v  170 (362)
                      =....+.++-....+.|+||..+|.-|-++|++.+..-
T Consensus       591 K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg  628 (867)
T TIGR01524       591 KSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVD  628 (867)
T ss_pred             HHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeC
Confidence            44444444445567999999999999999998886543

The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.

>PRK10517 magnesium-transporting ATPase MgtA; Provisional

Probab=96.22  E-value=0.013  Score=63.30  Aligned_cols=98  Identities=12%  Similarity=0.108  Sum_probs=74.2

Q ss_pred             CCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCC----------------CCCCCHHH
Q 017995           69 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR----------------TGKPSPDI  132 (362)
Q Consensus        69 ~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~----------------~gKp~p~~  132 (362)
                      -++.|++.+.++.|++.|+++.++|+.....+..+- +.+|+.+  +.+++|.+..                +++-.|+-
T Consensus       549 Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA-~~lGI~~--~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~  625 (902)
T PRK10517        549 DPPKETTAPALKALKASGVTVKILTGDSELVAAKVC-HEVGLDA--GEVLIGSDIETLSDDELANLAERTTLFARLTPMH  625 (902)
T ss_pred             CcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-HHcCCCc--cCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHH
Confidence            357899999999999999999999999999887666 8889853  3466665542                23344555


Q ss_pred             HHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEE
Q 017995          133 FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA  169 (362)
Q Consensus       133 ~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~  169 (362)
                      =....+.++-...-+.|+||..+|.-|-++|.+.+..
T Consensus       626 K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAm  662 (902)
T PRK10517        626 KERIVTLLKREGHVVGFMGDGINDAPALRAADIGISV  662 (902)
T ss_pred             HHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEe
Confidence            4445555554556789999999999999999877654

>smart00764 Citrate_ly_lig Citrate lyase ligase C-terminal domain

Probab=96.20  E-value=0.0073  Score=52.57  Aligned_cols=78  Identities=14%  Similarity=-0.030  Sum_probs=52.9

Q ss_pred             EcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEEEc
Q 017995           92 ASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVP  171 (362)
Q Consensus        92 ~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~  171 (362)
                      +..++++|++. |.+.++.    ..|++|+||++|+...+......+                     -.+.|+.+..++
T Consensus        91 a~lsa~~Fi~~-L~~~l~~----~~ivvG~df~FG~~~~G~~~~L~~---------------------~~~~g~~v~~I~  144 (182)
T smart00764       91 TTLDLRIFRKY-IAPALGI----THRYVGEEPFSPVTAIYNQTMKQT---------------------LLSPAIEVVEIE  144 (182)
T ss_pred             hcCCHHHHHHH-HHHHcCc----eEEEEcCCCCCCCCCccCHHHHHH---------------------HhhCCCEEEEEe
Confidence            46789999974 6466766    899999999999765444433211                     136789999998


Q ss_pred             CCCCccccccchhHhhccccccccc
Q 017995          172 SLPKQTHRYTAADEVINSLLDLRPE  196 (362)
Q Consensus       172 ~~~~~~~~~ssa~~vi~~l~el~~~  196 (362)
                      ....++..+ ||+.+++.+.++++.
T Consensus       145 r~~~~g~~i-SST~IR~~L~~G~v~  168 (182)
T smart00764      145 RKKANGQPI-SASTVRKLLKEGNLE  168 (182)
T ss_pred             cccCCCcEE-CHHHHHHHHHcCCHH
Confidence            865555544 446666666666644

Proteins of this family contain the C-terminal domain of citrate lyase ligase EC:6.2.1.22.

>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal

Probab=96.11  E-value=0.012  Score=52.45  Aligned_cols=78  Identities=14%  Similarity=0.159  Sum_probs=54.6

Q ss_pred             EEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCC--CC-CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCC
Q 017995           89 MALASNSHRATIESKISYQHGWNESFSVIVGSD--EV-RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGM  165 (362)
Q Consensus        89 ~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~--d~-~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~  165 (362)
                      ..+.+......+...+ +..++..    +.++.  ++ ..+..+...+..+++.++++++++++|||+.+|+.+.+.+|+
T Consensus       110 ~~~~~~~~~~~~~~~l-~~~~~~~----~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~ag~  184 (215)
T TIGR01487       110 VIMREGKDVDEVREII-KERGLNL----VDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRVVGF  184 (215)
T ss_pred             EEecCCccHHHHHHHH-HhCCeEE----EecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCC
Confidence            3445666666666666 5555432    21111  11 123445678999999999999999999999999999999999


Q ss_pred             EEEEEc
Q 017995          166 EVVAVP  171 (362)
Q Consensus       166 ~~i~v~  171 (362)
                      .+..-+
T Consensus       185 ~vam~n  190 (215)
T TIGR01487       185 KVAVAN  190 (215)
T ss_pred             eEEcCC
Confidence            876654

TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.

>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type

Probab=96.08  E-value=0.023  Score=62.53  Aligned_cols=100  Identities=10%  Similarity=0.091  Sum_probs=74.2

Q ss_pred             CCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCC----------CcEEEeCCCCC--------------
Q 017995           69 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNES----------FSVIVGSDEVR--------------  124 (362)
Q Consensus        69 ~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~----------f~~iv~~~d~~--------------  124 (362)
                      -++.|++.++++.|++.|+++.++|+.....+..+- +.+|+.+.          -..+++|.++.              
T Consensus       645 Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA-~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~  723 (1053)
T TIGR01523       645 DPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIA-QEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALC  723 (1053)
T ss_pred             cCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHH-HHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcC
Confidence            367899999999999999999999999999887766 88898532          12456665443              


Q ss_pred             --CCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEE
Q 017995          125 --TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA  169 (362)
Q Consensus       125 --~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~  169 (362)
                        +.+-.|+-=....+.++-....+.|+||..+|..+=++|++.+..
T Consensus       724 ~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAm  770 (1053)
T TIGR01523       724 LVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAM  770 (1053)
T ss_pred             eEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEec
Confidence              233345444444454544557799999999999999999887653

The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.

>TIGR01675 plant-AP plant acid phosphatase

Probab=96.07  E-value=0.048  Score=49.12  Aligned_cols=101  Identities=15%  Similarity=0.162  Sum_probs=63.2

Q ss_pred             cCCCCCchHHHHHHHHHHCCCcEEEEcCCChHh---HHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHH-HcCC
Q 017995           67 CKVKALPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAK-RLNM  142 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~---i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~-~~~~  142 (362)
                      ...++.|++.++++.|+++|+++.++|+.++..   ...-| ...|+..+ +.++--..-..+|+ ...|....+ ++--
T Consensus       117 ~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL-~~~G~~~~-~~LiLR~~~d~~~~-~~~yKs~~R~~l~~  193 (229)
T TIGR01675       117 GAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNL-INAGFTGW-KHLILRGLEDSNKT-VVTYKSEVRKSLME  193 (229)
T ss_pred             CCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHH-HHcCCCCc-CeeeecCCCCCCch-HhHHHHHHHHHHHh
Confidence            468999999999999999999999999998776   44556 56777654 55555431112232 233333222 2222


Q ss_pred             CCCcEEE-EecCHhhHHHHHHcCCEEEEEc
Q 017995          143 EPSSSLV-IEDSVIGVVAGKAAGMEVVAVP  171 (362)
Q Consensus       143 ~p~~~l~-igDs~~d~~aA~~aG~~~i~v~  171 (362)
                      ..-++++ |||...|+.+ ..+|.++.-++
T Consensus       194 ~GYrIv~~iGDq~sDl~G-~~~~~RtFKLP  222 (229)
T TIGR01675       194 EGYRIWGNIGDQWSDLLG-SPPGRRTFKLP  222 (229)
T ss_pred             CCceEEEEECCChHHhcC-CCccCceeeCC
Confidence            3345444 4898888864 34454554443

This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.

>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear

Probab=96.07  E-value=0.0046  Score=52.35  Aligned_cols=85  Identities=19%  Similarity=0.215  Sum_probs=61.3

Q ss_pred             CCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCC-cCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCc
Q 017995           68 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGW-NESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS  146 (362)
Q Consensus        68 ~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl-~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~  146 (362)
                      .+.+.||+.++|+.|.+. |.+.|.|++.+.+++.++ +.+.- ..+|+.++..+++...+..-   ..-+.+++-+.++
T Consensus        34 ~v~~RP~l~~FL~~l~~~-~ev~i~T~~~~~ya~~v~-~~ldp~~~~~~~~~~r~~~~~~~~~~---~KdL~~l~~~~~~  108 (159)
T PF03031_consen   34 YVKLRPGLDEFLEELSKH-YEVVIWTSASEEYAEPVL-DALDPNGKLFSRRLYRDDCTFDKGSY---IKDLSKLGRDLDN  108 (159)
T ss_dssp             EEEE-TTHHHHHHHHHHH-CEEEEE-SS-HHHHHHHH-HHHTTTTSSEEEEEEGGGSEEETTEE---E--GGGSSS-GGG
T ss_pred             eEeeCchHHHHHHHHHHh-ceEEEEEeehhhhhhHHH-Hhhhhhcccccccccccccccccccc---ccchHHHhhcccc
Confidence            366899999999999766 999999999999999988 77766 56789999887775333211   2456667778899


Q ss_pred             EEEEecCHhhH
Q 017995          147 SLVIEDSVIGV  157 (362)
Q Consensus       147 ~l~igDs~~d~  157 (362)
                      +|+|.|++.-.
T Consensus       109 vvivDD~~~~~  119 (159)
T PF03031_consen  109 VVIVDDSPRKW  119 (159)
T ss_dssp             EEEEES-GGGG
T ss_pred             EEEEeCCHHHe
Confidence            99999999644

It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....

>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase

Probab=96.05  E-value=0.033  Score=50.84  Aligned_cols=50  Identities=24%  Similarity=0.240  Sum_probs=43.2

Q ss_pred             CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEEEcC
Q 017995          123 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS  172 (362)
Q Consensus       123 ~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~~  172 (362)
                      ...+.++...+..+++.+++++++|+++||+.+|+.+.+.++...+++..
T Consensus       162 ~~~~~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~n  211 (249)
T TIGR01485       162 LPQGSGKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSN  211 (249)
T ss_pred             EeCCCChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECC
Confidence            33567888999999999999999999999999999999997766667754

Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=96.05  E-value=0.045  Score=50.97  Aligned_cols=91  Identities=19%  Similarity=0.214  Sum_probs=60.7

Q ss_pred             CCCCCchHHHHHHHHHHCCCcEEEEcCCChH---hHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCC
Q 017995           68 KVKALPGANRLIKHLSCHGVPMALASNSHRA---TIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP  144 (362)
Q Consensus        68 ~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~---~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p  144 (362)
                      .-.++||+.++|+.|+++|+++.++||++..   .....| +.+|+....+.|+++.         ......+++....+
T Consensus        16 ~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l-~~~G~~~~~~~i~ts~---------~~~~~~l~~~~~~~   85 (279)
T TIGR01452        16 GERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKF-ARLGFNGLAEQLFSSA---------LCAARLLRQPPDAP   85 (279)
T ss_pred             CCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH-HHcCCCCChhhEecHH---------HHHHHHHHhhCcCC
Confidence            3468999999999999999999999996532   222355 6678754445555432         33334445544455


Q ss_pred             CcEEEEecCHhhHHHHHHcCCEEEE
Q 017995          145 SSSLVIEDSVIGVVAGKAAGMEVVA  169 (362)
Q Consensus       145 ~~~l~igDs~~d~~aA~~aG~~~i~  169 (362)
                      .+++++|+.. .....+.+|+.++.
T Consensus        86 ~~v~~iG~~~-~~~~l~~~g~~~~~  109 (279)
T TIGR01452        86 KAVYVIGEEG-LRAELDAAGIRLAG  109 (279)
T ss_pred             CEEEEEcCHH-HHHHHHHCCCEEec
Confidence            7899999753 34456778888653

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>PRK15122 magnesium-transporting ATPase; Provisional

Probab=96.03  E-value=0.021  Score=61.85  Aligned_cols=98  Identities=14%  Similarity=0.086  Sum_probs=74.6

Q ss_pred             CCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCC----------------CCCCCHHH
Q 017995           69 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR----------------TGKPSPDI  132 (362)
Q Consensus        69 ~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~----------------~gKp~p~~  132 (362)
                      -++.|++.++++.|++.|+++.++|+.....+..+- +.+|+..  +.+++|.+..                +++-.|+-
T Consensus       549 Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA-~~lGI~~--~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~  625 (903)
T PRK15122        549 DPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKIC-REVGLEP--GEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQ  625 (903)
T ss_pred             CccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCCCC--CCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHH
Confidence            367899999999999999999999999998877666 8889853  3455555543                33345555


Q ss_pred             HHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEE
Q 017995          133 FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA  169 (362)
Q Consensus       133 ~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~  169 (362)
                      =....+.++-...-+.|+||..+|.-|=++|.+.+..
T Consensus       626 K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAm  662 (903)
T PRK15122        626 KSRVLKALQANGHTVGFLGDGINDAPALRDADVGISV  662 (903)
T ss_pred             HHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEe
Confidence            5555555555567799999999999999999887543

>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial

Probab=95.77  E-value=0.03  Score=50.63  Aligned_cols=47  Identities=15%  Similarity=-0.013  Sum_probs=41.5

Q ss_pred             CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEE
Q 017995          123 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA  169 (362)
Q Consensus       123 ~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~  169 (362)
                      ...+.+++..+..+++++++++++|++|||+.+|+.+.+.+|..+.+
T Consensus       154 ~~~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav  200 (236)
T TIGR02471       154 LPLRASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVV  200 (236)
T ss_pred             eeCCCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEE
Confidence            34567788999999999999999999999999999999999877754

Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.

>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]

Probab=95.49  E-value=0.03  Score=52.62  Aligned_cols=103  Identities=15%  Similarity=0.217  Sum_probs=73.6

Q ss_pred             CCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHH--hhcCCcCCCcEEEeCCCCC-----CCCC----CH--------
Q 017995           70 KALPGANRLIKHLSCHGVPMALASNSHRATIESKIS--YQHGWNESFSVIVGSDEVR-----TGKP----SP--------  130 (362)
Q Consensus        70 ~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~--~~~gl~~~f~~iv~~~d~~-----~gKp----~p--------  130 (362)
                      .--|...++|+.|+.+|-++.++||+|-.|+..-+.  -.-++.+.||.|++-.+-.     ..+|    +.        
T Consensus       240 ~r~~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvqA~KP~Fftde~rPfR~~dek~~sl~wd  319 (510)
T KOG2470|consen  240 ERNPQLLAFLRKLKDHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQANKPEFFTDERRPFRKYDEKRGSLLWD  319 (510)
T ss_pred             hccHHHHHHHHHHHHhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEEecCCCcccccccCcchhhcccccchhhh
Confidence            345577889999999999999999999999987651  1236778999887743211     1111    11        


Q ss_pred             -------------HHHHHHHHHcCCCCCcEEEEecCH-hhHHHHH-HcCCEEEEEcC
Q 017995          131 -------------DIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGK-AAGMEVVAVPS  172 (362)
Q Consensus       131 -------------~~~~~~~~~~~~~p~~~l~igDs~-~d~~aA~-~aG~~~i~v~~  172 (362)
                                   +.+...++--|+...+++++||.. .|+..-. ++|+++-++-+
T Consensus       320 kv~klekgkiYy~G~l~~flelt~WrG~~VlYFGDHlySDLad~tlkhgWRTgAII~  376 (510)
T KOG2470|consen  320 KVDKLEKGKIYYQGNLKSFLELTGWRGPRVLYFGDHLYSDLADLTLKHGWRTGAIIP  376 (510)
T ss_pred             hhhhcccCceeeeccHHHHHHHhccCCCeeEEecCcchhhhhhhHhhcccccccchH
Confidence                         123444555678899999999999 7887755 89999876544

>PF06574 FAD_syn: FAD synthetase; InterPro: IPR015864 Riboflavin is converted into catalytically active cofactors (FAD and FMN) by the actions of riboflavin kinase (2

Probab=95.49  E-value=0.0052  Score=52.19  Aligned_cols=84  Identities=24%  Similarity=0.322  Sum_probs=56.3

Q ss_pred             CchHHHHHHHHHHCCCcEEEE--------cCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCC---HHHHHHHHHHc
Q 017995           72 LPGANRLIKHLSCHGVPMALA--------SNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPS---PDIFLEAAKRL  140 (362)
Q Consensus        72 ~pgv~~~L~~L~~~g~~~~i~--------S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~---p~~~~~~~~~~  140 (362)
                      +--..+=++.|++.|+...++        ..++++|++.+|.+.+++    ..||+|+|+++|+..   ++.+...    
T Consensus        61 l~s~~ek~~~l~~~Gvd~~~~~~F~~~~~~ls~~~Fi~~iL~~~l~~----~~ivvG~DfrFG~~~~G~~~~L~~~----  132 (157)
T PF06574_consen   61 LTSLEEKLELLESLGVDYVIVIPFTEEFANLSPEDFIEKILKEKLNV----KHIVVGEDFRFGKNRSGDVELLKEL----  132 (157)
T ss_dssp             SS-HHHHHHHHHHTTESEEEEE-CCCHHCCS-HHHHHHHHCCCHCTE----EEEEEETT-EESGGGEEEHHHHHHC----
T ss_pred             CCCHHHHHHHHHHcCCCEEEEecchHHHHcCCHHHHHHHHHHhcCCc----cEEEEccCccCCCCCCCCHHHHHHh----
Confidence            445566778888899887644        457889999888447776    899999999999763   4444432    


Q ss_pred             CCCCCcEEEEecCHhhHHHHHHcCCEEEEEcCCCCccccccc
Q 017995          141 NMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTA  182 (362)
Q Consensus       141 ~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~~~~~~~~~~ss  182 (362)
                                         +++.|+.+..++....++..+||
T Consensus       133 -------------------~~~~g~~v~~v~~~~~~~~~ISS  155 (157)
T PF06574_consen  133 -------------------GKEYGFEVEVVPPVKIDGEKISS  155 (157)
T ss_dssp             -------------------TTTT-SEEEEE---EETTEE-SH
T ss_pred             -------------------cccCceEEEEECCEEcCCcEeCC
Confidence                               66789999999998766777765

7.1.26 from EC), which converts it into FMN, and FAD synthetase (2.7.7.2 from EC), which adenylates FMN to FAD. Eukaryotes usually have two separate enzymes, while most prokaryotes have a single bifunctional protein that can carry out both catalyses, although exceptions occur in both cases. While eukaryotic monofunctional riboflavin kinase is orthologous to the bifunctional prokaryotic enzyme [], the monofunctional FAD synthetase differs from its prokaryotic counterpart, and is instead related to the PAPS-reductase family []. The bacterial FAD synthetase that is part of the bifunctional enzyme has remote similarity to nucleotidyl transferases and, hence, it may be involved in the adenylylation reaction of FAD synthetases []. This entry represents prokaryotic-type FAD synthetase, which occurs primarily as part of a bifunctional enzyme.; GO: 0003919 FMN adenylyltransferase activity, 0009231 riboflavin biosynthetic process; PDB: 2X0K_B 3OP1_B 1T6Z_A 2I1L_A 1T6Y_B 1T6X_B 1S4M_A 1MRZ_A.

>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit

Probab=95.29  E-value=0.062  Score=58.97  Aligned_cols=99  Identities=15%  Similarity=0.130  Sum_probs=71.7

Q ss_pred             CCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCC------------------------cEEEeCCCCC-
Q 017995           70 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF------------------------SVIVGSDEVR-  124 (362)
Q Consensus        70 ~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f------------------------~~iv~~~d~~-  124 (362)
                      ++.|++.+.++.|+++|+++.++|+.+...+.... +.+|+...-                        ..++.|.++. 
T Consensus       568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia-~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~  646 (997)
T TIGR01106       568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIA-KGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKD  646 (997)
T ss_pred             CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhh
Confidence            67899999999999999999999999999887777 777874210                        1355554432 


Q ss_pred             -----------------CCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEE
Q 017995          125 -----------------TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA  169 (362)
Q Consensus       125 -----------------~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~  169 (362)
                                       +++-.|+-=....+.++-...-+.|+||+.+|+.+=++|.+.+..
T Consensus       647 l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiam  708 (997)
T TIGR01106       647 MTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAM  708 (997)
T ss_pred             CCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceec
Confidence                             233344444444444444446789999999999999999887653

Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.

>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=95.21  E-value=0.065  Score=58.21  Aligned_cols=104  Identities=15%  Similarity=0.147  Sum_probs=77.9

Q ss_pred             CCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCc--EEEeCCCCCC----------------CCCC
Q 017995           68 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS--VIVGSDEVRT----------------GKPS  129 (362)
Q Consensus        68 ~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~--~iv~~~d~~~----------------gKp~  129 (362)
                      .-+|.|+++++++.|++.|+++.++|+.....+..+- +.+|+...-+  .++.|.+...                .+=.
T Consensus       545 ~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa-~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvs  623 (917)
T COG0474         545 EDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIA-KECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVS  623 (917)
T ss_pred             cCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHH-HHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcC
Confidence            4678999999999999999999999999999877666 7888876432  3666766542                1223


Q ss_pred             HHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEEEcC
Q 017995          130 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS  172 (362)
Q Consensus       130 p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~~  172 (362)
                      |+-=..+.+.++-...-+.|+||..+|+-|=++|.+.+.....
T Consensus       624 P~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~~  666 (917)
T COG0474         624 PEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGE  666 (917)
T ss_pred             HHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEeccc
Confidence            4443344444444567799999999999999999988866543

>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins

Probab=95.13  E-value=0.035  Score=48.60  Aligned_cols=90  Identities=16%  Similarity=0.204  Sum_probs=54.0

Q ss_pred             hcCCCCCchHHHHHHHHHHCCCcEEEEcCCChH-------hHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHH
Q 017995           66 LCKVKALPGANRLIKHLSCHGVPMALASNSHRA-------TIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAK  138 (362)
Q Consensus        66 ~~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~-------~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~  138 (362)
                      +..++|+||+.++|+.|.+.|+...++|..+..       .-...|.++++...+-+.+++++     |.          
T Consensus        69 f~~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~~~~~~~~~~-----K~----------  133 (191)
T PF06941_consen   69 FSNLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIPYDNLIFTGD-----KT----------  133 (191)
T ss_dssp             TTT--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHHHCCEEEESS-----GG----------
T ss_pred             hcCCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCchheEEEecC-----CC----------
Confidence            468999999999999999999777777766543       12234433433222213344422     21          


Q ss_pred             HcCCCCCcEEEEecCHhhHHHHHHcCCEEEEEcCCC
Q 017995          139 RLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP  174 (362)
Q Consensus       139 ~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~~~~  174 (362)
                      .++.+    ++|+|++.-+..+...|++++......
T Consensus       134 ~v~~D----vlIDD~~~n~~~~~~~g~~~iLfd~p~  165 (191)
T PF06941_consen  134 LVGGD----VLIDDRPHNLEQFANAGIPVILFDQPY  165 (191)
T ss_dssp             GC--S----EEEESSSHHHSS-SSESSEEEEE--GG
T ss_pred             eEecc----EEecCChHHHHhccCCCceEEEEcCCC
Confidence            12222    889999999999999999999997743

5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....

>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB

Probab=95.05  E-value=0.03  Score=49.32  Aligned_cols=44  Identities=23%  Similarity=0.155  Sum_probs=40.4

Q ss_pred             CCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 017995          125 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV  168 (362)
Q Consensus       125 ~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i  168 (362)
                      .+.+++..+..++++++++++++++|||+.+|+.+++.+|+.+.
T Consensus       160 ~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~va  203 (204)
T TIGR01484       160 AGVDKGSALQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAVA  203 (204)
T ss_pred             CCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCceE
Confidence            46778899999999999999999999999999999999998875

The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.

>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC

Probab=94.87  E-value=0.14  Score=51.89  Aligned_cols=84  Identities=15%  Similarity=0.116  Sum_probs=65.9

Q ss_pred             CCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEE
Q 017995           69 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL  148 (362)
Q Consensus        69 ~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l  148 (362)
                      -++.|++.+.++.|++.|+++.++|..........- +.+|+              ++.-.|+.-....+.+.-....+.
T Consensus       346 d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia-~~lgi--------------~~~~~p~~K~~~v~~l~~~g~~v~  410 (499)
T TIGR01494       346 DPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIA-KELGI--------------FARVTPEEKAALVEALQKKGRVVA  410 (499)
T ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HHcCc--------------eeccCHHHHHHHHHHHHHCCCEEE
Confidence            478999999999999999999999999998877655 77765              123445555555555554457899


Q ss_pred             EEecCHhhHHHHHHcCCEE
Q 017995          149 VIEDSVIGVVAGKAAGMEV  167 (362)
Q Consensus       149 ~igDs~~d~~aA~~aG~~~  167 (362)
                      |+||..+|..+-+.+++.+
T Consensus       411 ~vGDg~nD~~al~~Advgi  429 (499)
T TIGR01494       411 MTGDGVNDAPALKKADVGI  429 (499)
T ss_pred             EECCChhhHHHHHhCCCcc
Confidence            9999999999988887653

The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.

>TIGR00685 T6PP trehalose-phosphatase

Probab=94.33  E-value=0.048  Score=49.74  Aligned_cols=56  Identities=16%  Similarity=0.107  Sum_probs=43.7

Q ss_pred             EEEeCCCCCCCCCC----HHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHc-------CCEEEEEc
Q 017995          116 VIVGSDEVRTGKPS----PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA-------GMEVVAVP  171 (362)
Q Consensus       116 ~iv~~~d~~~gKp~----p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~a-------G~~~i~v~  171 (362)
                      .++.+..+-..||.    ...+..++++++..+.++++|||+.+|+.+++.+       |...+.|.
T Consensus       151 ~v~~g~~~~e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~  217 (244)
T TIGR00685       151 EVMDGKAVVELKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG  217 (244)
T ss_pred             EEEECCeEEEEeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe
Confidence            34445444444555    4889999999999999999999999999999888       66666664

At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.

>smart00775 LNS2 LNS2 domain

Probab=94.32  E-value=0.61  Score=39.47  Aligned_cols=95  Identities=14%  Similarity=0.192  Sum_probs=59.4

Q ss_pred             CCCchHHHHHHHHHHCCCcEEEEcCCChHhHH---HHHHhh-----cCCcCCCcEEEeCCCCCC-------CCCCHHHHH
Q 017995           70 KALPGANRLIKHLSCHGVPMALASNSHRATIE---SKISYQ-----HGWNESFSVIVGSDEVRT-------GKPSPDIFL  134 (362)
Q Consensus        70 ~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~---~~L~~~-----~gl~~~f~~iv~~~d~~~-------gKp~p~~~~  134 (362)
                      ...|++.++++.++++|+++.++|+.+...+.   ..| ..     .++.  ...++++.....       -..++..|.
T Consensus        27 ~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l-~~~~~~~~~lp--~g~li~~~g~~~~~~~~e~i~~~~~~~K  103 (157)
T smart00775       27 WTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYL-SQIKQDGHNLP--HGPVLLSPDRLFAALHREVISKKPEVFK  103 (157)
T ss_pred             cCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHH-HHhhhccccCC--CceEEEcCCcchhhhhcccccCCHHHHH
Confidence            56799999999999999999999999988764   455 33     2231  124555443221       123343333


Q ss_pred             -----HHHHHcCCCCCcE-EEEecCHhhHHHHHHcCCEE
Q 017995          135 -----EAAKRLNMEPSSS-LVIEDSVIGVVAGKAAGMEV  167 (362)
Q Consensus       135 -----~~~~~~~~~p~~~-l~igDs~~d~~aA~~aG~~~  167 (362)
                           .+.+.+.-..-.. +.+||+.+|+.+=+++|+..
T Consensus       104 ~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~~  142 (157)
T smart00775      104 IACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIPP  142 (157)
T ss_pred             HHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCCh
Confidence                 2222222111233 34678889999999999864

This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.

>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=94.27  E-value=0.13  Score=50.14  Aligned_cols=101  Identities=19%  Similarity=0.155  Sum_probs=84.3

Q ss_pred             CCCCCc--hHHHHHHHHHHCCCcEEEEcC--CChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCC
Q 017995           68 KVKALP--GANRLIKHLSCHGVPMALASN--SHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME  143 (362)
Q Consensus        68 ~~~~~p--gv~~~L~~L~~~g~~~~i~S~--~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~  143 (362)
                      +..++|  ...++.+.+.+.|-++.++|.  -|.+.++..| ...|.+-+---+..+.+++..|.+-..|..+++.-+++
T Consensus        95 KevLypn~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L-~s~g~d~~nipiY~S~e~rl~KnSg~LFk~Vlk~EnVd  173 (635)
T COG5610          95 KEVLYPNKKNIELVEEAIKNEKRVILISDMYLPSSILRTFL-NSFGPDFNNIPIYMSSEFRLKKNSGNLFKAVLKLENVD  173 (635)
T ss_pred             eeEeeccccchHHHHHHHhCCCeEEEEecccCcHHHHHHHH-HhcCCCccCceeeecceeehhcccchHHHHHHhhcCCC
Confidence            455666  456789999999999999997  3667777777 66776544334788999999999999999999999999


Q ss_pred             CCcEEEEecCH-hhHHHHHHcCCEEEE
Q 017995          144 PSSSLVIEDSV-IGVVAGKAAGMEVVA  169 (362)
Q Consensus       144 p~~~l~igDs~-~d~~aA~~aG~~~i~  169 (362)
                      |...+++||.. .|...+++.|+.+..
T Consensus       174 ~~~w~H~GDN~~aD~l~pk~LgI~Tlf  200 (635)
T COG5610         174 PKKWIHCGDNWVADYLKPKNLGISTLF  200 (635)
T ss_pred             hhheEEecCchhhhhcCccccchhHHH
Confidence            99999999999 899999999998754

>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily

Probab=93.40  E-value=0.12  Score=47.13  Aligned_cols=45  Identities=18%  Similarity=0.185  Sum_probs=39.6

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEEE
Q 017995          126 GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV  170 (362)
Q Consensus       126 gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v  170 (362)
                      +-.....+..+++.+++++++|++|||+.+|+.+.+.+|+.+.+-
T Consensus       186 ~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~  230 (256)
T TIGR00099       186 GVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMG  230 (256)
T ss_pred             CCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEec
Confidence            344568899999999999999999999999999999999986653

The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.

>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=93.39  E-value=0.54  Score=46.42  Aligned_cols=94  Identities=21%  Similarity=0.259  Sum_probs=75.4

Q ss_pred             CCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCC----CCCCCHHHHHHHHHHcCCCCC
Q 017995           70 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR----TGKPSPDIFLEAAKRLNMEPS  145 (362)
Q Consensus        70 ~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~----~gKp~p~~~~~~~~~~~~~p~  145 (362)
                      .+|...+..+..|+++|+-++|+|-+.+.-+...+ .++.     +-|.--+|+.    ..-|..+.++.+++++++..+
T Consensus       255 ~~fk~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF-~khp-----~MiLkeedfa~~~iNW~~K~eNirkIAkklNlg~d  328 (574)
T COG3882         255 EAFKTFQNFIKGLKKQGVLLAVCSKNTEKDAKEVF-RKHP-----DMILKEEDFAVFQINWDPKAENIRKIAKKLNLGLD  328 (574)
T ss_pred             hhHHHHHHHHHHHHhccEEEEEecCCchhhHHHHH-hhCC-----CeEeeHhhhhhheecCCcchhhHHHHHHHhCCCcc
Confidence            34556788899999999999999999999888888 4432     4555555554    347889999999999999999


Q ss_pred             cEEEEecCHhhHHHHHHcCCEEEEE
Q 017995          146 SSLVIEDSVIGVVAGKAAGMEVVAV  170 (362)
Q Consensus       146 ~~l~igDs~~d~~aA~~aG~~~i~v  170 (362)
                      ..+++.|++...+--++-+= +.++
T Consensus       329 SmvFiDD~p~ErE~vk~~~~-v~Vi  352 (574)
T COG3882         329 SMVFIDDNPAERELVKRELP-VSVI  352 (574)
T ss_pred             ceEEecCCHHHHHHHHhcCc-eeec
Confidence            99999999998888777664 4443

>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase

Probab=93.28  E-value=0.22  Score=55.15  Aligned_cols=42  Identities=17%  Similarity=0.120  Sum_probs=34.3

Q ss_pred             CCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCC
Q 017995           68 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGW  110 (362)
Q Consensus        68 ~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl  110 (362)
                      +-++.|||.++++.|++.|+++.++|+...+.+..+- ...|+
T Consensus       629 eD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA-~~~~i  670 (1057)
T TIGR01652       629 EDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIG-YSCRL  670 (1057)
T ss_pred             hhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHH-HHhCC
Confidence            3578899999999999999999999998877666554 44455

This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.

>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]

Probab=93.26  E-value=0.26  Score=51.59  Aligned_cols=100  Identities=15%  Similarity=0.147  Sum_probs=75.7

Q ss_pred             CCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCc----EEEeCCCCCC----------------CCC
Q 017995           69 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS----VIVGSDEVRT----------------GKP  128 (362)
Q Consensus        69 ~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~----~iv~~~d~~~----------------gKp  128 (362)
                      -+|.|++++.++.|++.|+++.++|+........+- +++|+...=+    ...+|.+|.-                .+-
T Consensus       583 DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~-r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~  661 (972)
T KOG0202|consen  583 DPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIA-REIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARA  661 (972)
T ss_pred             CCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHH-HHhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEec
Confidence            468999999999999999999999999999887666 7888866544    4556655541                123


Q ss_pred             CHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEE
Q 017995          129 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA  169 (362)
Q Consensus       129 ~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~  169 (362)
                      .|..=.++.+.|+-..+=+-|-||..+|.-|-+.|.+.+..
T Consensus       662 ~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAM  702 (972)
T KOG0202|consen  662 EPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAM  702 (972)
T ss_pred             CchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceee
Confidence            45555555555665667788899999999998888776543

>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V)

Probab=93.26  E-value=0.55  Score=52.03  Aligned_cols=42  Identities=14%  Similarity=0.143  Sum_probs=37.0

Q ss_pred             CCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCc
Q 017995           69 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN  111 (362)
Q Consensus        69 ~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~  111 (362)
                      -++.|++.+.++.|++.|+++.++|+.....+..+- +.+|+-
T Consensus       655 d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA-~~~gii  696 (1054)
T TIGR01657       655 NPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVA-RECGIV  696 (1054)
T ss_pred             cCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCCC
Confidence            568999999999999999999999999988877666 777884

These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=93.09  E-value=0.45  Score=50.37  Aligned_cols=87  Identities=16%  Similarity=0.175  Sum_probs=64.2

Q ss_pred             CCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEE
Q 017995           69 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL  148 (362)
Q Consensus        69 ~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l  148 (362)
                      -++.|++...+..|++.|+++.++|+.....++..- ++.|+    +.|++-     -+|.  -=....++++-....+.
T Consensus       722 D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA-~~VGi----~~V~ae-----v~P~--~K~~~Ik~lq~~~~~Va  789 (951)
T KOG0207|consen  722 DQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVA-QQVGI----DNVYAE-----VLPE--QKAEKIKEIQKNGGPVA  789 (951)
T ss_pred             cccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHH-HhhCc----ceEEec-----cCch--hhHHHHHHHHhcCCcEE
Confidence            568899999999999999999999999999888776 77884    555542     2332  11223344444557899


Q ss_pred             EEecCHhhHHHHHHcCCEE
Q 017995          149 VIEDSVIGVVAGKAAGMEV  167 (362)
Q Consensus       149 ~igDs~~d~~aA~~aG~~~  167 (362)
                      ||||..+|.-|-..+.+.+
T Consensus       790 MVGDGINDaPALA~AdVGI  808 (951)
T KOG0207|consen  790 MVGDGINDAPALAQADVGI  808 (951)
T ss_pred             EEeCCCCccHHHHhhccce
Confidence            9999999988866665543

>PRK10513 sugar phosphate phosphatase; Provisional

Probab=92.42  E-value=0.19  Score=46.24  Aligned_cols=46  Identities=17%  Similarity=0.136  Sum_probs=40.2

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEEEc
Q 017995          126 GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVP  171 (362)
Q Consensus       126 gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~  171 (362)
                      +-.....+..+++.+|++++++++|||+.+|+.+-+.+|..+..-+
T Consensus       194 gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~N  239 (270)
T PRK10513        194 RVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGN  239 (270)
T ss_pred             CCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecC
Confidence            3445688999999999999999999999999999999999876543

>PRK10976 putative hydrolase; Provisional

Probab=91.90  E-value=0.19  Score=46.12  Aligned_cols=46  Identities=13%  Similarity=0.096  Sum_probs=40.0

Q ss_pred             CCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEEEcC
Q 017995          127 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS  172 (362)
Q Consensus       127 Kp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~~  172 (362)
                      -.....+..+++.+|++++++++|||+.+|+.+-+.+|..+..-..
T Consensus       189 vsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA  234 (266)
T PRK10976        189 VSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNA  234 (266)
T ss_pred             CChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCC
Confidence            3356889999999999999999999999999999999998765543

>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria

Probab=91.13  E-value=2.9  Score=38.33  Aligned_cols=105  Identities=15%  Similarity=0.217  Sum_probs=72.8

Q ss_pred             CCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHH--hhcCCc--CC-Cc--EEE----e-C-----------CCCCC
Q 017995           69 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKIS--YQHGWN--ES-FS--VIV----G-S-----------DEVRT  125 (362)
Q Consensus        69 ~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~--~~~gl~--~~-f~--~iv----~-~-----------~d~~~  125 (362)
                      ...-+.+.++++.|+++|+++..+|..+..+....+.  +.+|++  .. |.  ..+    + .           ==+..
T Consensus        80 ~lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft~  159 (252)
T PF11019_consen   80 ELIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFTG  159 (252)
T ss_pred             EEcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCCceeecCeEEeC
Confidence            3445699999999999999999999887665544441  455652  11 10  001    0 0           00112


Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHH----HHHcCCEEEEEcCC
Q 017995          126 GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA----GKAAGMEVVAVPSL  173 (362)
Q Consensus       126 gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~a----A~~aG~~~i~v~~~  173 (362)
                      +-+..+.+...+.+++..|+.++||.|+...+.+    ++..|+.++++...
T Consensus       160 ~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Yt  211 (252)
T PF11019_consen  160 GQDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHYT  211 (252)
T ss_pred             CCccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEEc
Confidence            2335589999999999999999999999976665    56789999888663

The function is not known.

>PRK10444 UMP phosphatase; Provisional

Probab=91.07  E-value=1.5  Score=40.18  Aligned_cols=52  Identities=25%  Similarity=0.301  Sum_probs=37.4

Q ss_pred             CCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHH--hhcCCcCCCcEEEeC
Q 017995           69 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKIS--YQHGWNESFSVIVGS  120 (362)
Q Consensus        69 ~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~--~~~gl~~~f~~iv~~  120 (362)
                      -.++||+.++|+.|+++|.++.++||++......+..  +.+|+.---+.|+++
T Consensus        16 ~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~~~~i~ts   69 (248)
T PRK10444         16 NVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTS   69 (248)
T ss_pred             CeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHhhEecH
Confidence            3789999999999999999999999987654433331  456764333455543

>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457

Probab=90.90  E-value=0.45  Score=43.51  Aligned_cols=52  Identities=10%  Similarity=0.291  Sum_probs=40.5

Q ss_pred             CCCCchHHHHHHHHHHCCCcEEEEcCC---ChHhHHHHHHhhcCCcCCCcEEEeCC
Q 017995           69 VKALPGANRLIKHLSCHGVPMALASNS---HRATIESKISYQHGWNESFSVIVGSD  121 (362)
Q Consensus        69 ~~~~pgv~~~L~~L~~~g~~~~i~S~~---~~~~i~~~L~~~~gl~~~f~~iv~~~  121 (362)
                      -.++|++.++|+.|+++|.++.++||+   +...+...+ +.+|+....+.|+++.
T Consensus        16 ~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l-~~~g~~~~~~~iit~~   70 (249)
T TIGR01457        16 KERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEML-ASFDIPATLETVFTAS   70 (249)
T ss_pred             CeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH-HHcCCCCChhhEeeHH
Confidence            457889999999999999999999983   355556667 6788876666677653

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.

>COG3700 AphA Acid phosphatase (class B) [General function prediction only]

Probab=90.90  E-value=2.5  Score=36.36  Aligned_cols=106  Identities=14%  Similarity=0.155  Sum_probs=67.0

Q ss_pred             HHHHHHhhhcC-CCCCchHHHHHHHHHHCCCcEEEEcCCChH---hHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHH
Q 017995           58 VYSMFSDHLCK-VKALPGANRLIKHLSCHGVPMALASNSHRA---TIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIF  133 (362)
Q Consensus        58 ~~~~~~~~~~~-~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~---~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~  133 (362)
                      +.+..+....+ .-|..-+++++.--.++|=.+.++|+....   -+...|.+.+.+......++.|+--     .|.-|
T Consensus       101 FW~~vn~g~D~~SIPKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv~f~Gdk~-----k~~qy  175 (237)
T COG3700         101 FWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPVIFAGDKP-----KPGQY  175 (237)
T ss_pred             HHHHHhcCCccccchHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCcceeeccCCC-----Ccccc
Confidence            33444444433 334456677777778899999999986543   3444555667776655666666533     22222


Q ss_pred             H--HHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEEEcC
Q 017995          134 L--EAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS  172 (362)
Q Consensus       134 ~--~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~~  172 (362)
                      .  ..++.    ..--++.|||..|+.+|+++|++-|-+-.
T Consensus       176 ~Kt~~i~~----~~~~IhYGDSD~Di~AAkeaG~RgIRilR  212 (237)
T COG3700         176 TKTQWIQD----KNIRIHYGDSDNDITAAKEAGARGIRILR  212 (237)
T ss_pred             cccHHHHh----cCceEEecCCchhhhHHHhcCccceeEEe
Confidence            2  12222    23457889999999999999999776643

>TIGR01658 EYA-cons_domain eyes absent protein conserved domain

Probab=90.88  E-value=5.6  Score=36.07  Aligned_cols=78  Identities=18%  Similarity=0.163  Sum_probs=57.4

Q ss_pred             EEcCC-ChHhHHHHHHhhcCCcCCCc--EEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEE
Q 017995           91 LASNS-HRATIESKISYQHGWNESFS--VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV  167 (362)
Q Consensus        91 i~S~~-~~~~i~~~L~~~~gl~~~f~--~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~  167 (362)
                      ++|++ --..+.+.|  ..+|...|.  .|.++..+  ||  ...|..+.+++|-+...-++|||......+|+..++++
T Consensus       180 LVTs~qLVPaLaKcL--Ly~L~~~f~ieNIYSa~kv--GK--~~cFe~I~~Rfg~p~~~f~~IGDG~eEe~aAk~l~wPF  253 (274)
T TIGR01658       180 LVTSGQLIPSLAKCL--LFRLDTIFRIENVYSSIKV--GK--LQCFKWIKERFGHPKVRFCAIGDGWEECTAAQAMNWPF  253 (274)
T ss_pred             EEEcCccHHHHHHHH--HhccCCccccccccchhhc--ch--HHHHHHHHHHhCCCCceEEEeCCChhHHHHHHhcCCCe
Confidence            44444 333333344  357766664  46665443  44  58999999999998899999999999999999999999


Q ss_pred             EEEcCCC
Q 017995          168 VAVPSLP  174 (362)
Q Consensus       168 i~v~~~~  174 (362)
                      +-|....
T Consensus       254 w~I~~h~  260 (274)
T TIGR01658       254 VKIDLHP  260 (274)
T ss_pred             EEeecCC
Confidence            9997743

This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.

>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25)

Probab=90.88  E-value=0.14  Score=46.36  Aligned_cols=89  Identities=20%  Similarity=0.234  Sum_probs=53.6

Q ss_pred             CCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHH---HHHhhcCCcCCCcEEEeCCCCCCCCC----CHHHHHHHHHHc
Q 017995           68 KVKALPGANRLIKHLSCHGVPMALASNSHRATIES---KISYQHGWNESFSVIVGSDEVRTGKP----SPDIFLEAAKRL  140 (362)
Q Consensus        68 ~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~---~L~~~~gl~~~f~~iv~~~d~~~gKp----~p~~~~~~~~~~  140 (362)
                      ..+++||+.++++.++++|+.+.++|+.++..-+.   -| ...|...+-..+.-+++...++.    ..+-...+.++ 
T Consensus       113 ~~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL-~~~G~~~~~~l~lr~~~~~~~~~~~~yK~~~r~~i~~~-  190 (229)
T PF03767_consen  113 KAPAIPGALELYNYARSRGVKVFFITGRPESQREATEKNL-KKAGFPGWDHLILRPDKDPSKKSAVEYKSERRKEIEKK-  190 (229)
T ss_dssp             GGEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHH-HHHTTSTBSCGEEEEESSTSS------SHHHHHHHHHT-
T ss_pred             cCcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHH-HHcCCCccchhccccccccccccccccchHHHHHHHHc-
Confidence            35899999999999999999999999977664333   34 55676544233333333211111    11222222222 


Q ss_pred             CCCCCc-EEEEecCHhhHHHHH
Q 017995          141 NMEPSS-SLVIEDSVIGVVAGK  161 (362)
Q Consensus       141 ~~~p~~-~l~igDs~~d~~aA~  161 (362)
                      |   -+ +++|||...|+..++
T Consensus       191 G---y~Ii~~iGD~~~D~~~~~  209 (229)
T PF03767_consen  191 G---YRIIANIGDQLSDFSGAK  209 (229)
T ss_dssp             T---EEEEEEEESSGGGCHCTH
T ss_pred             C---CcEEEEeCCCHHHhhccc
Confidence            2   23 556699999998843

The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....

>TIGR01680 Veg_Stor_Prot vegetative storage protein

Probab=90.82  E-value=1.5  Score=40.55  Aligned_cols=104  Identities=13%  Similarity=0.179  Sum_probs=61.6

Q ss_pred             cCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHH---HHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHH-HHHcCC
Q 017995           67 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIES---KISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEA-AKRLNM  142 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~---~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~-~~~~~~  142 (362)
                      ...++.||+.++++.|+++|+++.++|+.++..-+.   -| ...|...+ +.++--.+-...+.+.--+... .+++--
T Consensus       142 ~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL-~kaGy~~~-~~LiLR~~~D~~~~~av~yKs~~R~~li~  219 (275)
T TIGR01680       142 GEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANL-KKAGYHTW-EKLILKDPQDNSAENAVEYKTAARAKLIQ  219 (275)
T ss_pred             ccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH-HHcCCCCc-ceeeecCCCCCccchhHHHHHHHHHHHHH
Confidence            468899999999999999999999999998754322   33 45676544 5555433221222222333322 222222


Q ss_pred             CCCcEE-EEecCHhhHHHHHHcCCEEEEEcC
Q 017995          143 EPSSSL-VIEDSVIGVVAGKAAGMEVVAVPS  172 (362)
Q Consensus       143 ~p~~~l-~igDs~~d~~aA~~aG~~~i~v~~  172 (362)
                      +.-+++ .|||...|..+....+-++.-++.
T Consensus       220 eGYrIv~~iGDq~sDl~G~~~g~~RtFKLPN  250 (275)
T TIGR01680       220 EGYNIVGIIGDQWNDLKGEHRGAIRSFKLPN  250 (275)
T ss_pred             cCceEEEEECCCHHhccCCCccCcceecCCC
Confidence            334444 459999998654422345555544

The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.

>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase

Probab=90.56  E-value=0.3  Score=43.91  Aligned_cols=44  Identities=9%  Similarity=-0.019  Sum_probs=33.4

Q ss_pred             CCCCCCHHHHHHHHHHcC--CCCCcEEEEecCHhhHHHHHHcCCEEEE
Q 017995          124 RTGKPSPDIFLEAAKRLN--MEPSSSLVIEDSVIGVVAGKAAGMEVVA  169 (362)
Q Consensus       124 ~~gKp~p~~~~~~~~~~~--~~p~~~l~igDs~~d~~aA~~aG~~~i~  169 (362)
                      +.+|+  ......++.++  +++.+|+++||+.+|+.+.+.+|+.+++
T Consensus       179 ~~sK~--~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v~v  224 (225)
T TIGR02461       179 GSDKG--KAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAFLV  224 (225)
T ss_pred             CCCHH--HHHHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcEec
Confidence            34454  45555556665  4778999999999999999999998763

Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.

>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family

Probab=90.34  E-value=0.47  Score=43.38  Aligned_cols=46  Identities=11%  Similarity=-0.038  Sum_probs=39.5

Q ss_pred             CCCHHHHHHHHHHcCCC--CCcEEEEecCHhhHHHHHHcCCEEEEEcC
Q 017995          127 KPSPDIFLEAAKRLNME--PSSSLVIEDSVIGVVAGKAAGMEVVAVPS  172 (362)
Q Consensus       127 Kp~p~~~~~~~~~~~~~--p~~~l~igDs~~d~~aA~~aG~~~i~v~~  172 (362)
                      -.....+..+++.++++  ++++++|||+.+|+.+.+.+|..+++-+.
T Consensus       175 ~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na  222 (256)
T TIGR01486       175 SDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGP  222 (256)
T ss_pred             CCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCC
Confidence            33456688889999999  99999999999999999999999876544

This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=90.07  E-value=0.39  Score=44.12  Aligned_cols=49  Identities=18%  Similarity=0.389  Sum_probs=37.3

Q ss_pred             CCchHHHHHHHHHHCCCcEEEEcCCChHh---HHHHHHhhcCCcCCCcEEEeC
Q 017995           71 ALPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQHGWNESFSVIVGS  120 (362)
Q Consensus        71 ~~pgv~~~L~~L~~~g~~~~i~S~~~~~~---i~~~L~~~~gl~~~f~~iv~~  120 (362)
                      ++||+.++|+.|+++|+++.++||++...   +...| +.+|+.--.+.|+++
T Consensus        22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l-~~~g~~~~~~~i~ts   73 (257)
T TIGR01458        22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERL-QRLGFDISEDEVFTP   73 (257)
T ss_pred             cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHH-HHcCCCCCHHHeEcH
Confidence            89999999999999999999999966553   44556 667775333555553

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []

Probab=89.86  E-value=0.55  Score=41.91  Aligned_cols=42  Identities=17%  Similarity=0.121  Sum_probs=37.4

Q ss_pred             CHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEEE
Q 017995          129 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV  170 (362)
Q Consensus       129 ~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v  170 (362)
                      ....+..+++.+|++++++++|||+.+|+.+-+.+|..+++=
T Consensus       187 K~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~  228 (254)
T PF08282_consen  187 KGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMG  228 (254)
T ss_dssp             HHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEET
T ss_pred             HHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEc
Confidence            457788889999999999999999999999999999986543

This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....

>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional

Probab=89.77  E-value=0.46  Score=43.79  Aligned_cols=44  Identities=7%  Similarity=0.044  Sum_probs=38.9

Q ss_pred             CCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEEEc
Q 017995          128 PSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVP  171 (362)
Q Consensus       128 p~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~  171 (362)
                      .....+..+++.+|++++++++|||+.+|+.+-+.+|..+..-+
T Consensus       188 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~N  231 (272)
T PRK15126        188 NKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGN  231 (272)
T ss_pred             ChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccC
Confidence            35688999999999999999999999999999999998776543

>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=88.78  E-value=0.72  Score=42.58  Aligned_cols=45  Identities=9%  Similarity=-0.080  Sum_probs=39.2

Q ss_pred             CCCCHHHHHHHHHHcCC---CCCcEEEEecCHhhHHHHHHcCCEEEEE
Q 017995          126 GKPSPDIFLEAAKRLNM---EPSSSLVIEDSVIGVVAGKAAGMEVVAV  170 (362)
Q Consensus       126 gKp~p~~~~~~~~~~~~---~p~~~l~igDs~~d~~aA~~aG~~~i~v  170 (362)
                      +-.....+..+++.+|+   ++++++.|||+.+|+.+=+.+|+.+++-
T Consensus       185 g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~  232 (271)
T PRK03669        185 SAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVK  232 (271)
T ss_pred             CCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEec
Confidence            33455788999999999   9999999999999999999999887664

>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=88.49  E-value=8.9  Score=32.21  Aligned_cols=100  Identities=17%  Similarity=0.148  Sum_probs=62.1

Q ss_pred             CCCCCchHHHHHHHHHHC-C-CcEEEEcCCCh-------HhHHHHHHhhcCCcCCCcEEEeCCCCCCCCC--CHHHHHHH
Q 017995           68 KVKALPGANRLIKHLSCH-G-VPMALASNSHR-------ATIESKISYQHGWNESFSVIVGSDEVRTGKP--SPDIFLEA  136 (362)
Q Consensus        68 ~~~~~pgv~~~L~~L~~~-g-~~~~i~S~~~~-------~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp--~p~~~~~~  136 (362)
                      .....|....-++.++.. | -.++++||+.-       .-....|.+..|+    ..+  -...  -||  +.+.+...
T Consensus        59 ~~~Iwp~~l~~ie~~~~vygek~i~v~SNsaG~~~~D~d~s~Ak~le~k~gI----pVl--RHs~--kKP~ct~E~~~y~  130 (190)
T KOG2961|consen   59 SLAIWPPLLPSIERCKAVYGEKDIAVFSNSAGLTEYDHDDSKAKALEAKIGI----PVL--RHSV--KKPACTAEEVEYH  130 (190)
T ss_pred             ccccCchhHHHHHHHHHHhCcccEEEEecCcCccccCCchHHHHHHHHhhCC----ceE--eecc--cCCCccHHHHHHH
Confidence            355667777777777762 2 35788888632       2223344344454    211  1112  233  44555443


Q ss_pred             HHHcC-CCCCcEEEEecCH-hhHHHHHHcCCEEEEEcCCCC
Q 017995          137 AKRLN-MEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPK  175 (362)
Q Consensus       137 ~~~~~-~~p~~~l~igDs~-~d~~aA~~aG~~~i~v~~~~~  175 (362)
                      ...-. ..+++++||||.. +|+-.|...|.-.+++.++..
T Consensus       131 ~~Nshv~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~gv~  171 (190)
T KOG2961|consen  131 FGNSHVCTSSELIMVGDRLFTDIVYANRMGSLGVWTEPGVR  171 (190)
T ss_pred             hCCcccCChhHeEEEccchhhhHhhhhhccceeEEeccccc
Confidence            22111 6789999999999 999999999999999988644

>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins

Probab=88.45  E-value=1.2  Score=41.06  Aligned_cols=52  Identities=15%  Similarity=0.249  Sum_probs=47.1

Q ss_pred             CCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCC
Q 017995           71 ALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEV  123 (362)
Q Consensus        71 ~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~  123 (362)
                      ..|.+.+.|..|++.|.-+.+=|-+.++.+...+ +.++|.++|+.|+++..-
T Consensus       143 r~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl-~~~~L~~~Fd~ii~~G~~  194 (297)
T PF05152_consen  143 RDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSL-KELKLEGYFDIIICGGNK  194 (297)
T ss_pred             CChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHH-HHhCCccccEEEEeCCcc
Confidence            5689999999999999999999999999999999 889999999999987543

>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]

Probab=88.21  E-value=1.7  Score=43.45  Aligned_cols=86  Identities=15%  Similarity=0.155  Sum_probs=67.2

Q ss_pred             CCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 017995           70 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV  149 (362)
Q Consensus        70 ~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~  149 (362)
                      ...||++|-+..||+.|+++.++|+.++-....+- +..|++++.           ..-.|+.=....++.+-...=+-|
T Consensus       447 ivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA-~EAGVDdfi-----------AeatPEdK~~~I~~eQ~~grlVAM  514 (681)
T COG2216         447 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIA-AEAGVDDFI-----------AEATPEDKLALIRQEQAEGRLVAM  514 (681)
T ss_pred             hcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHH-HHhCchhhh-----------hcCChHHHHHHHHHHHhcCcEEEE
Confidence            36789999999999999999999999887665444 677775441           223456666777777877788999


Q ss_pred             EecCHhhHHHHHHcCCEE
Q 017995          150 IEDSVIGVVAGKAAGMEV  167 (362)
Q Consensus       150 igDs~~d~~aA~~aG~~~  167 (362)
                      .||..+|.-+-.++.+.+
T Consensus       515 tGDGTNDAPALAqAdVg~  532 (681)
T COG2216         515 TGDGTNDAPALAQADVGV  532 (681)
T ss_pred             cCCCCCcchhhhhcchhh
Confidence            999999999877776654

>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA

Probab=88.17  E-value=3.6  Score=37.13  Aligned_cols=88  Identities=20%  Similarity=0.229  Sum_probs=54.9

Q ss_pred             CCCCCchHHHHHHHHHHCCCcEEEEcCCC---hHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCC
Q 017995           68 KVKALPGANRLIKHLSCHGVPMALASNSH---RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP  144 (362)
Q Consensus        68 ~~~~~pgv~~~L~~L~~~g~~~~i~S~~~---~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p  144 (362)
                      ...++|++.+.|+.|+++|+++.++||+.   ...+...|.+.+|+.-..+.++++..         .....+++.. +.
T Consensus        12 ~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~~iits~~---------~~~~~l~~~~-~~   81 (236)
T TIGR01460        12 GHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPDQIITSGS---------VTKDLLRQRF-EG   81 (236)
T ss_pred             CCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHHHeeeHHH---------HHHHHHHHhC-CC
Confidence            35679999999999999999999999765   33333445243676544555655432         2222223222 33


Q ss_pred             CcEEEEecCHhhHHHHHHcCCE
Q 017995          145 SSSLVIEDSVIGVVAGKAAGME  166 (362)
Q Consensus       145 ~~~l~igDs~~d~~aA~~aG~~  166 (362)
                      ..++++|.. ...+..+.+|+.
T Consensus        82 ~~v~v~G~~-~~~~~l~~~g~~  102 (236)
T TIGR01460        82 EKVYVIGVG-ELRESLEGLGFR  102 (236)
T ss_pred             CEEEEECCH-HHHHHHHHcCCc
Confidence            468888853 445566777765

Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.

>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]

Probab=87.52  E-value=0.65  Score=42.56  Aligned_cols=47  Identities=19%  Similarity=0.171  Sum_probs=40.5

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEEEcC
Q 017995          126 GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS  172 (362)
Q Consensus       126 gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~~  172 (362)
                      +-.....+..+++.+|+++++++++||+.+|+.+-+.+|..++.-..
T Consensus       187 g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na  233 (264)
T COG0561         187 GVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNA  233 (264)
T ss_pred             CCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCC
Confidence            34456788899999999999999999999999999999998876544

>PLN02887 hydrolase family protein

Probab=87.15  E-value=0.9  Score=46.77  Aligned_cols=46  Identities=13%  Similarity=0.097  Sum_probs=39.8

Q ss_pred             CCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEEEcC
Q 017995          127 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS  172 (362)
Q Consensus       127 Kp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~~  172 (362)
                      -.....+..+++.+|++++++++|||+.+|+.+-+.+|..+..-+.
T Consensus       506 vSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA  551 (580)
T PLN02887        506 TSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNG  551 (580)
T ss_pred             CCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCC
Confidence            3355788999999999999999999999999999999998765443

>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]

Probab=86.51  E-value=2.2  Score=45.10  Aligned_cols=97  Identities=14%  Similarity=0.146  Sum_probs=65.9

Q ss_pred             CCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCc--EEEeCCCCCCCCCCHHHHHHHHHHcCC---
Q 017995           68 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS--VIVGSDEVRTGKPSPDIFLEAAKRLNM---  142 (362)
Q Consensus        68 ~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~--~iv~~~d~~~gKp~p~~~~~~~~~~~~---  142 (362)
                      +-+..|||++.++.+++.|+.+-++|+..-..++.+- ...|+-..=+  .+.-|.+|+  +-..+-.....-++.+   
T Consensus       645 kDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA-~eCGILt~~~d~~~lEG~eFr--~~s~ee~~~i~pkl~VlAR  721 (1034)
T KOG0204|consen  645 KDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIA-RECGILTPGGDFLALEGKEFR--ELSQEERDKIWPKLRVLAR  721 (1034)
T ss_pred             cCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHH-HHcccccCCCccceecchhhh--hcCHHHHHhhhhhheeeec
Confidence            3568999999999999999999999999888776655 5667643322  344555555  2222222222222221   


Q ss_pred             --------------CCCcEEEE-ecCHhhHHHHHHcCCEE
Q 017995          143 --------------EPSSSLVI-EDSVIGVVAGKAAGMEV  167 (362)
Q Consensus       143 --------------~p~~~l~i-gDs~~d~~aA~~aG~~~  167 (362)
                                    .-.+++.| ||..+|.-|-++|.+..
T Consensus       722 SSP~DK~lLVk~L~~~g~VVAVTGDGTNDaPALkeADVGl  761 (1034)
T KOG0204|consen  722 SSPNDKHLLVKGLIKQGEVVAVTGDGTNDAPALKEADVGL  761 (1034)
T ss_pred             CCCchHHHHHHHHHhcCcEEEEecCCCCCchhhhhcccch
Confidence                          34677877 99999999988886654

>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=86.17  E-value=1.5  Score=40.46  Aligned_cols=44  Identities=20%  Similarity=0.311  Sum_probs=38.4

Q ss_pred             CCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCC
Q 017995           70 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF  114 (362)
Q Consensus        70 ~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f  114 (362)
                      ...+.+.++|+.|+++|++++++|+.+...+...+ +.+++..++
T Consensus        21 ~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~-~~l~l~~~~   64 (273)
T PRK00192         21 YSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLR-KELGLEDPF   64 (273)
T ss_pred             cCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-HHcCCCCCE
Confidence            45678999999999999999999999999888888 788886654

>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]

Probab=85.77  E-value=1.6  Score=42.28  Aligned_cols=99  Identities=19%  Similarity=0.228  Sum_probs=73.2

Q ss_pred             hHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhc--CCcCCCcEEEeCC-------------CC---------------
Q 017995           74 GANRLIKHLSCHGVPMALASNSHRATIESKISYQH--GWNESFSVIVGSD-------------EV---------------  123 (362)
Q Consensus        74 gv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~--gl~~~f~~iv~~~-------------d~---------------  123 (362)
                      -...+|..+++.|-++.+.||+.-++........+  ++..+|+.+++..             ++               
T Consensus       202 ~~v~~l~~~r~sGKk~fl~Tns~~~ytd~~mt~~~~~dW~~yfd~v~~~a~Kp~ff~e~~vlreV~t~~g~l~~g~~~~p  281 (424)
T KOG2469|consen  202 TIVPLLSMLRDSGKKTFLHTNSDWDYTDIFMAFHYGFDWETYFDLVETRAAKPGFFHEGTVLREVEPQEGLLKNGDNTGP  281 (424)
T ss_pred             ccccchHHHHhhccceEEeeccccchhhHHHHHHhCCCcceeEEEEEEeccCCccccccceeeeeccccccccccccCCc
Confidence            34448999999999999999999988776663333  5677888877652             00               


Q ss_pred             --CCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hhHHH-HHHcCCEEEEEcC
Q 017995          124 --RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVA-GKAAGMEVVAVPS  172 (362)
Q Consensus       124 --~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~-~d~~a-A~~aG~~~i~v~~  172 (362)
                        ..+.+++.....+++.++....+++++||.. .|+-- -+..|+.++.|.+
T Consensus       282 ~e~~~~ySggs~~~~~~~l~~~g~diLy~gdHi~~dvl~skk~~~wrt~lv~p  334 (424)
T KOG2469|consen  282 LEQGGVYSGGSLKTVETSMKVKGKDILYGGDHIWGDVLVSKKRRGWRTVLVAP  334 (424)
T ss_pred             chhcccCCcchHHHHHHHhcccccceeecccceeeeEEecceecceEEEEEeh
Confidence              0234456788888899999999999999999 56544 4566888777655

>PLN03190 aminophospholipid translocase; Provisional

Probab=85.18  E-value=1.2  Score=49.78  Aligned_cols=34  Identities=21%  Similarity=0.229  Sum_probs=29.3

Q ss_pred             CCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHH
Q 017995           69 VKALPGANRLIKHLSCHGVPMALASNSHRATIES  102 (362)
Q Consensus        69 ~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~  102 (362)
                      -++.+|+.++++.|++.|+++.++|+.....+..
T Consensus       725 D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~  758 (1178)
T PLN03190        725 DKLQQGVPEAIESLRTAGIKVWVLTGDKQETAIS  758 (1178)
T ss_pred             cCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHH
Confidence            5789999999999999999999999977665443

>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice

Probab=84.86  E-value=1.1  Score=40.69  Aligned_cols=94  Identities=19%  Similarity=0.236  Sum_probs=53.1

Q ss_pred             CCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeC----CCCC----CCCC-------CHHH
Q 017995           68 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGS----DEVR----TGKP-------SPDI  132 (362)
Q Consensus        68 ~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~----~d~~----~gKp-------~p~~  132 (362)
                      .+.+.+|+.++++.|.++++|+.|.|.+-.+.++.+| ++.+....--.||+-    ++-+    +.-|       +...
T Consensus        88 ~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL-~q~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn~~~  166 (246)
T PF05822_consen   88 DIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVL-RQAGVFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKNESA  166 (246)
T ss_dssp             ---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHH-HHTT--BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HHHHH
T ss_pred             chhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHH-HHcCCCCCCeEEEeeeEEECCcceEeecCCCceEEeeCCccc
Confidence            5889999999999999999999999999999999999 554543211123321    1111    1122       1111


Q ss_pred             HH--HHHHHcCCCCCcEEEEecCHhhHHHHHHc
Q 017995          133 FL--EAAKRLNMEPSSSLVIEDSVIGVVAGKAA  163 (362)
Q Consensus       133 ~~--~~~~~~~~~p~~~l~igDs~~d~~aA~~a  163 (362)
                      +.  ...+.+ -...+++..|||..|+..|...
T Consensus       167 l~~~~~~~~~-~~R~NvlLlGDslgD~~Ma~G~  198 (246)
T PF05822_consen  167 LEDSPYFKQL-KKRTNVLLLGDSLGDLHMADGV  198 (246)
T ss_dssp             HTTHHHHHCT-TT--EEEEEESSSGGGGTTTT-
T ss_pred             ccCchHHHHh-ccCCcEEEecCccCChHhhcCC
Confidence            11  001111 2457899999999999987655

The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.

>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5

Probab=84.43  E-value=3.6  Score=39.08  Aligned_cols=89  Identities=16%  Similarity=0.204  Sum_probs=57.4

Q ss_pred             CCCCCchHHHHHHHHHHC----CCcEEEEcCCC---hHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHc
Q 017995           68 KVKALPGANRLIKHLSCH----GVPMALASNSH---RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL  140 (362)
Q Consensus        68 ~~~~~pgv~~~L~~L~~~----g~~~~i~S~~~---~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~  140 (362)
                      ...++||+.++|+.|+.+    |+++.++||+.   .......|.+++|+.-..+.|+.+.        . .....+++.
T Consensus        14 g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~~~~~i~~s~--------~-~~~~ll~~~   84 (321)
T TIGR01456        14 GKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDVSPLQVIQSH--------S-PYKSLVNKY   84 (321)
T ss_pred             CccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCCCHHHHHhhh--------H-HHHHHHHHc
Confidence            456799999999999998    99999999986   3333333336677643333444332        1 223333443


Q ss_pred             CCCCCcEEEEecCHhhHHHHHHcCCEEEE
Q 017995          141 NMEPSSSLVIEDSVIGVVAGKAAGMEVVA  169 (362)
Q Consensus       141 ~~~p~~~l~igDs~~d~~aA~~aG~~~i~  169 (362)
                      +   ..+++||.+. -.+.++.+|+..++
T Consensus        85 ~---~~v~viG~~~-~~~~l~~~G~~~vv  109 (321)
T TIGR01456        85 E---KRILAVGTGS-VRGVAEGYGFQNVV  109 (321)
T ss_pred             C---CceEEEeChH-HHHHHHHcCCcccc
Confidence            2   3678888654 46667789988654

The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.

>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245

Probab=83.97  E-value=4.1  Score=35.85  Aligned_cols=84  Identities=14%  Similarity=0.096  Sum_probs=54.8

Q ss_pred             CCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcC--CCcEEEeCCCC--------CC----CCCCHHHHH
Q 017995           69 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE--SFSVIVGSDEV--------RT----GKPSPDIFL  134 (362)
Q Consensus        69 ~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~--~f~~iv~~~d~--------~~----gKp~p~~~~  134 (362)
                      .-..|++.++|+.+.+. |.++|-|.+...+++.++ ..+++..  .+.....-+.+        ..    -|+    +.
T Consensus        44 ~~kRP~l~eFL~~~~~~-feIvVwTAa~~~ya~~~l-~~l~~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKd----L~  117 (195)
T TIGR02245        44 ELMRPYLHEFLTSAYED-YDIVIWSATSMKWIEIKM-TELGVLTNPNYKITFLLDSTAMITVHTPRRGKFDVKP----LG  117 (195)
T ss_pred             EEeCCCHHHHHHHHHhC-CEEEEEecCCHHHHHHHH-HHhcccCCccceEEEEeccccceeeEeeccCcEEEee----cH
Confidence            46789999999999985 999999999999999988 6666532  11211111211        11    122    11


Q ss_pred             HHHHHcC--CCCCcEEEEecCHhhHH
Q 017995          135 EAAKRLN--MEPSSSLVIEDSVIGVV  158 (362)
Q Consensus       135 ~~~~~~~--~~p~~~l~igDs~~d~~  158 (362)
                      ..-.+++  .+.+++++|.|++.-..
T Consensus       118 ~lw~~l~~~~~~~ntiiVDd~p~~~~  143 (195)
T TIGR02245       118 VIWALLPEFYSMKNTIMFDDLRRNFL  143 (195)
T ss_pred             HhhhhcccCCCcccEEEEeCCHHHHh
Confidence            1222343  37789999999985444

This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.

>KOG3128 consensus Uncharacterized conserved protein [Function unknown]

Probab=83.31  E-value=1.2  Score=40.32  Aligned_cols=94  Identities=12%  Similarity=0.198  Sum_probs=62.7

Q ss_pred             CCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeC-CCCC-------CCCC-------CHHH
Q 017995           68 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGS-DEVR-------TGKP-------SPDI  132 (362)
Q Consensus        68 ~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~-~d~~-------~gKp-------~p~~  132 (362)
                      .+.+..|+.++...|+.+++|+.|.|.+--+.++.++.+..++.. +-++++- -+|.       +.+|       +...
T Consensus       136 ~i~lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~~~~p-n~k~vSN~~~F~edg~l~gF~~~Lihtfnkn~~v  214 (298)
T KOG3128|consen  136 NIALREGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKLVLHP-NVKFVSNYMDFDEDGNLCGFSQPLIHTFNKNSSV  214 (298)
T ss_pred             hHHHHHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHHhccCc-cHHhhhhhhhhcccchhhhhhHHHHHHHccchHH
Confidence            356778999999999999999999999999999888856656555 3334332 1222       3333       1122


Q ss_pred             HHHHHHHcC--CCCCcEEEEecCHhhHHHHHH
Q 017995          133 FLEAAKRLN--MEPSSSLVIEDSVIGVVAGKA  162 (362)
Q Consensus       133 ~~~~~~~~~--~~p~~~l~igDs~~d~~aA~~  162 (362)
                      +....+.+.  -+..++++.||+..|+..|..
T Consensus       215 ~~~~s~yf~~~~~~~nVillGdsigdl~ma~g  246 (298)
T KOG3128|consen  215 LQNESEYFHQLAGRVNVILLGDSIGDLHMADG  246 (298)
T ss_pred             HHhhhHHHhhccCCceEEEeccccccchhhcC
Confidence            222233332  356778888999999987643

>COG2503 Predicted secreted acid phosphatase [General function prediction only]

Probab=83.12  E-value=7.5  Score=35.22  Aligned_cols=85  Identities=15%  Similarity=0.210  Sum_probs=54.1

Q ss_pred             cCCCCCchHHHHHHHHHHCCCcEEEEcCCChHh-HH---HHHHhhcCCcCCC-cEEEeCCCCCCCCCCHHHHHHHHHHcC
Q 017995           67 CKVKALPGANRLIKHLSCHGVPMALASNSHRAT-IE---SKISYQHGWNESF-SVIVGSDEVRTGKPSPDIFLEAAKRLN  141 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~-i~---~~L~~~~gl~~~f-~~iv~~~d~~~gKp~p~~~~~~~~~~~  141 (362)
                      ...++.||+.++|.+.-++|..+..+||..++. ..   .-| .+.|+...- +++.--   .-.|+...-+..+ ++  
T Consensus       119 ~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nL-k~~g~~~~~~~~~llk---k~~k~Ke~R~~~v-~k--  191 (274)
T COG2503         119 KKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENL-KSEGLPQVLESHLLLK---KDKKSKEVRRQAV-EK--  191 (274)
T ss_pred             cccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHH-HHcCcccccccceEEe---eCCCcHHHHHHHH-hh--
Confidence            357899999999999999999999999987765 22   234 566665432 233322   1224433333333 33  


Q ss_pred             CCCCcEEEEecCHhhHHH
Q 017995          142 MEPSSSLVIEDSVIGVVA  159 (362)
Q Consensus       142 ~~p~~~l~igDs~~d~~a  159 (362)
                       +-.-++.|||...|...
T Consensus       192 -~~~iVm~vGDNl~DF~d  208 (274)
T COG2503         192 -DYKIVMLVGDNLDDFGD  208 (274)
T ss_pred             -ccceeeEecCchhhhcc
Confidence             33456777999877553

>COG4030 Uncharacterized protein conserved in archaea [Function unknown]

Probab=81.61  E-value=2.9  Score=37.46  Aligned_cols=41  Identities=20%  Similarity=0.181  Sum_probs=32.6

Q ss_pred             CCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCC
Q 017995           68 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGW  110 (362)
Q Consensus        68 ~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl  110 (362)
                      ..++.||+.+.++.|.+. .+-.++|.+-+.++++.- ..+|+
T Consensus        81 sa~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a-~~ig~  121 (315)
T COG4030          81 SAKLVPGAEETMATLQER-WTPVVISTSYTQYLRRTA-SMIGV  121 (315)
T ss_pred             hcccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHH-HhcCC
Confidence            378999999999999987 677888888888777655 55555

>PRK10513 sugar phosphate phosphatase; Provisional

Probab=81.35  E-value=4.2  Score=37.19  Aligned_cols=49  Identities=12%  Similarity=0.151  Sum_probs=38.8

Q ss_pred             CCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEe
Q 017995           70 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVG  119 (362)
Q Consensus        70 ~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~  119 (362)
                      .+-|...+.|+.|+++|+++.++|+.+...+...+ +.+++....+.+++
T Consensus        20 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~-~~l~~~~~~~~~I~   68 (270)
T PRK10513         20 TISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYL-KELHMEQPGDYCIT   68 (270)
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHH-HHhCCCCCCCeEEE
Confidence            45567889999999999999999999999888877 77787543234444

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=80.15  E-value=4.6  Score=35.73  Aligned_cols=40  Identities=20%  Similarity=0.261  Sum_probs=34.9

Q ss_pred             CCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCc
Q 017995           71 ALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN  111 (362)
Q Consensus        71 ~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~  111 (362)
                      ..+...++|+.|+++|+++.++|+.+...+...+ +.+++.
T Consensus        17 ~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~-~~l~~~   56 (221)
T TIGR02463        17 DWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQ-KALGLT   56 (221)
T ss_pred             CcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HHcCCC
Confidence            3445789999999999999999999999998888 888875

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	362
1q9s_A	149	Crystal Structure Of Riboflavin Kinase With Ternary		2e-36
1nb0_A	147	Crystal Structure Of Human Riboflavin Kinase Length		2e-36
1n05_A	163	Crystal Structure Of Schizosaccharomyces Pombe Ribo		3e-34
3l5k_A	250	The Crystal Structure Of Human Haloacid Dehalogenas		1e-31
3bnw_A	181	Crystal Structure Of Riboflavin Kinase From Trypano		2e-17
2x0k_A	338	Crystal Structure Of Modular Fad Synthetase From Co		4e-13
3zug_A	338	E268d Mutant Of Fad Synthetase From Corynebacterium		1e-12
3e58_A	214	Crystal Structure Of Putative Beta-Phosphoglucomuta		5e-11
3nas_A	233	The Crystal Structure Of Beta-Phosphoglucomutase Fr		9e-11
3kbb_A	216	Crystal Structure Of Putative Beta-Phosphoglucomuta		2e-10
4ex6_A	237	Crystal Structure Of The Alnumycin P Phosphatase Al		7e-09
1te2_A	226	Putative Phosphatase Ynic From Escherichia Coli K12		9e-09
1mrz_A	293	Crystal Structure Of A Flavin Binding Protein From		4e-08
4gib_A	250	2.27 Angstrom Crystal Structure Of Beta-Phosphogluc		4e-08
3dv9_A	247	Putative Beta-Phosphoglucomutase From Bacteroides V		5e-08
4eek_A	259	Crystal Structure Of Had Family Hydrolase Dr_1622 F		7e-08
3fm9_A	221	Analysis Of The Structural Determinants Underlying		3e-07
1lvh_A	221	The Structure Of Phosphorylated Beta-phosphoglucomu		3e-07
1o03_A	221	Structure Of Pentavalent Phosphorous Intermediate O		3e-07
3qub_A	243	Crystal Structure Of Pyrophosphatase From Bacteroid		4e-07
2i1l_A	293	Crystal Structure Of The C2 Form Of Fad Synthetase		5e-07
3quq_A	243	Crystal Structure Of Pyrophosphatase From Bacteroid		8e-07
3qyp_A	243	Crystal Structure Of Pyrophosphatase From Bacteroid		8e-07
3qu5_A	243	Crystal Structure Of Pyrophosphatase From Bacteroid		8e-07
3qut_A	243	Crystal Structure Of Pyrophosphatase From Bacteroid		8e-07
3qu4_A	243	Crystal Structure Of Pyrophosphatase From Bacteroid		8e-07
3r9k_A	243	Crystal Structure Of Pyrophosphatase From Bacteroid		8e-07
4g9b_A	243	Crystal Structure Of Beta-Phosphoglucomutase Homolo		1e-06
3d6j_A	225	Crystal Structure Of Putative Haloacid Dehalogenase		1e-06
2fdr_A	229	Crystal Structure Of Conserved Haloacid Dehalogenas		1e-05
3kzx_A	231	Crystal Structure Of A Had-Superfamily Hydrolase Fr		4e-05
2yy6_A	213	Crystal Structure Of The Phosphoglycolate Phosphata		1e-04
2nyv_A	222	X-Ray Crystal Structure Of A Phosphoglycolate Phosp		3e-04
3s6j_A	233	The Crystal Structure Of A Hydrolase From Pseudomon		3e-04
2hdo_A	209	Crystal Structure Of Putative Phosphoglycolate Phos		4e-04

>pdb|1Q9S|A Chain A, Crystal Structure Of Riboflavin Kinase With Ternary Product Complex Length = 149

Iteration: 1
 Score =  149 bits (377), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 67/143 (46%), Positives = 103/143 (72%)
Query: 215 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMS 274
           P++  G VV+G GRGSK LGIPTAN   +   ++ ++  +G+Y+GWA + +  V+KMV+S
Sbjct: 6   PYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADISTGIYYGWASVGSGDVHKMVVS 65
Query: 275 IGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRK 334
           IGWNPY+ N +K++E  ++H F EDFY E L++ IVGY+RPE NF SLE+LI+ I  D +
Sbjct: 66  IGWNPYYKNTKKSMETHIMHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDIE 125
Query: 335 VAERALDLPLYSKYRDDPYLKIT 357
            A++ L+LP Y K ++D + +++
Sbjct: 126 EAKKRLELPEYLKIKEDNFFQVS 148

>pdb|1NB0|A Chain A, Crystal Structure Of Human Riboflavin Kinase Length = 147

Iteration: 1
 Score =  149 bits (377), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 67/143 (46%), Positives = 103/143 (72%)
Query: 215 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMS 274
           P++  G VV+G GRGSK LGIPTAN   +   ++ ++  +G+Y+GWA + +  V+KMV+S
Sbjct: 4   PYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADISTGIYYGWASVGSGDVHKMVVS 63
Query: 275 IGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRK 334
           IGWNPY+ N +K++E  ++H F EDFY E L++ IVGY+RPE NF SLE+LI+ I  D +
Sbjct: 64  IGWNPYYKNTKKSMETHIMHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDIE 123
Query: 335 VAERALDLPLYSKYRDDPYLKIT 357
            A++ L+LP Y K ++D + +++
Sbjct: 124 EAKKRLELPEYLKIKEDNFFQVS 146

>pdb|1N05|A Chain A, Crystal Structure Of Schizosaccharomyces Pombe Riboflavin Kinase Reveals A Novel Atp And Riboflavin Binding Fold Length = 163

Iteration: 1
 Score =  142 bits (357), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 68/142 (47%), Positives = 94/142 (66%), Gaps = 1/142 (0%)
Query: 215 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMS 274
           P    G VV G GRGSK LGIPTAN+S +   ++L    SGVYFG+A +  R V+ MVMS
Sbjct: 23  PIRFEGKVVHGFGRGSKELGIPTANISEDAIQELLRYRDSGVYFGYAMVQKR-VFPMVMS 81
Query: 275 IGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRK 334
           +GWNPY+ N  ++ E  L+    EDFY+E + ++++GYIRPE N+  L+ LI  IH D +
Sbjct: 82  VGWNPYYKNKLRSAEVHLIERQGEDFYEEIMRVIVLGYIRPELNYAGLDKLIEDIHTDIR 141
Query: 335 VAERALDLPLYSKYRDDPYLKI 356
           VA  ++D P YS Y+ DP+ K+
Sbjct: 142 VALNSMDRPSYSSYKKDPFFKV 163

>pdb|3L5K|A Chain A, The Crystal Structure Of Human Haloacid Dehalogenase-Like Hydrolase Domain Containing 1a (Hdhd1a) Length = 250

Iteration: 1
 Score =  133 bits (335), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 81/207 (39%), Positives = 116/207 (56%), Gaps = 4/207 (1%)
Query: 2   TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSM 61
           T+ ++S V +    +Y K++    K  ++GK  LE A II++   LP +K E V E  + 
Sbjct: 44  TERLYSVVFQEICNRYDKKYSWDVKSLVMGKKALEAAQIIIDVLQLPMSKEELVEESQTK 103
Query: 62  FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS-VIVGS 120
             +       +PGA +LI HL  HG+P ALA++S  A+ + K S    +   FS +++G 
Sbjct: 104 LKEVFPTAALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSHIVLGD 163
Query: 121 D-EVRTGKPSPDIFLEAAKRLNMEPS--SSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQT 177
           D EV+ GKP PDIFL  AKR +  P+    LV ED+  GV A  AAGM+VV VP      
Sbjct: 164 DPEVQHGKPDPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSR 223
Query: 178 HRYTAADEVINSLLDLRPEKWGLPPFQ 204
              T A  V+NSL D +PE +GLP ++
Sbjct: 224 DLTTKATLVLNSLQDFQPELFGLPSYE 250

>pdb|3BNW|A Chain A, Crystal Structure Of Riboflavin Kinase From Trypanosoma Brucei Length = 181

Iteration: 1
 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 74/144 (51%), Gaps = 9/144 (6%)
Query: 214 EPWYIGGPVVKGLGRGSKVLGIPTANLSTE-GYSDVLSEHPSGVYFGWAGLS-------- 264
           +P+++ G VV G GRG   LG PTAN+  +    + L  + + V +GW  +S        
Sbjct: 16  QPFFLRGKVVHGKGRGGSQLGFPTANIGLDKDVMECLQPYKNLVVYGWGTVSQVPGKERE 75
Query: 265 TRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLET 324
           + G Y    SIG+N  FD    T+EP+ LHEF  DFY   + ++++G IR   +F SL+ 
Sbjct: 76  SFGPYPFAASIGFNMQFDEKTLTVEPYFLHEFGWDFYGAVVKIIVLGEIRSMGSFHSLQA 135
Query: 325 LIAKIHEDRKVAERALDLPLYSKY 348
           L+  I  D +     L  P   ++
Sbjct: 136 LVDTIKSDVQFTRDMLQKPQLQEF 159

>pdb|2X0K|A Chain A, Crystal Structure Of Modular Fad Synthetase From Corynebacterium Ammoniagenes Length = 338

Iteration: 1
 Score = 72.0 bits (175), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 66/128 (51%), Gaps = 15/128 (11%)
Query: 216 WYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGW-----------AGLS 264
           +Y+ GPVV+G GRG K LG PTAN   + + D ++    GVY GW             + 
Sbjct: 187 FYVTGPVVRGAGRGGKELGFPTAN---QYFHDTVALPADGVYAGWLTILPTEAPVSGNME 243
Query: 265 TRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLET 324
               Y   +S+G NP F + ++++E ++L   D D Y  ++ +  V ++R    F S+E 
Sbjct: 244 PEVAYAAAISVGTNPTFGDEQRSVESFVLDR-DADLYGHDVKVEFVDHVRAMEKFDSVEQ 302
Query: 325 LIAKIHED 332
           L+  + +D
Sbjct: 303 LLEVMAKD 310

>pdb|3ZUG|A Chain A, E268d Mutant Of Fad Synthetase From Corynebacterium Ammoniagenes Length = 338

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 66/128 (51%), Gaps = 15/128 (11%)
Query: 216 WYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGW-----------AGLS 264
           +Y+ GPVV+G GRG K LG PTAN   + + D ++    GVY GW             + 
Sbjct: 187 FYVTGPVVRGAGRGGKELGFPTAN---QYFHDTVALPADGVYAGWLTILPTEAPVSGNME 243
Query: 265 TRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLET 324
               Y   +S+G NP F + +++++ ++L   D D Y  ++ +  V ++R    F S+E 
Sbjct: 244 PEVAYAAAISVGTNPTFGDEQRSVDSFVLDR-DADLYGHDVKVEFVDHVRAMEKFDSVEQ 302
Query: 325 LIAKIHED 332
           L+  + +D
Sbjct: 303 LLEVMAKD 310

>pdb|3E58|A Chain A, Crystal Structure Of Putative Beta-Phosphoglucomutase From Streptococcus Thermophilus Length = 214

Iteration: 1
 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 71/122 (58%), Gaps = 2/122 (1%)
Query: 72  LPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPD 131
            P   +++  +   G+ + LAS+S +A I   +  ++     F +++  +E +  KP+P+
Sbjct: 91  FPDVLKVLNEVKSQGLEIGLASSSVKADIFRALE-ENRLQGFFDIVLSGEEFKESKPNPE 149
Query: 132 IFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLL 191
           I+L A K+LN++ S +L+IEDS  G+ AG AA +EV A+        + +AA  +++SL 
Sbjct: 150 IYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGXDQ-SAAKGLLDSLT 208
Query: 192 DL 193
           D+
Sbjct: 209 DV 210

>pdb|3NAS|A Chain A, The Crystal Structure Of Beta-Phosphoglucomutase From Bacillus Subtilis Length = 233

Iteration: 1
 Score = 64.3 bits (155), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 48/141 (34%), Positives = 62/141 (43%), Gaps = 7/141 (4%)
Query: 56  NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS 115
           N  Y      L     LPG  RL+  L    + + LAS+S  A    KI  +    + F 
Sbjct: 78  NRDYQXLISKLTPEDLLPGIGRLLCQLKNENIKIGLASSSRNA---PKILRRLAIIDDFH 134
Query: 116 VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPK 175
            IV    +  GKP PDIFL AA  L++ P+    IED+  G+ A K+AG   V V     
Sbjct: 135 AIVDPTTLAKGKPDPDIFLTAAAXLDVSPADCAAIEDAEAGISAIKSAGXFAVGV----G 190
Query: 176 QTHRYTAADEVINSLLDLRPE 196
           Q      AD V+    DL  E
Sbjct: 191 QGQPXLGADLVVRQTSDLTLE 211

>pdb|3KBB|A Chain A, Crystal Structure Of Putative Beta-Phosphoglucomutase From Thermotoga Maritima Length = 216

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 82/172 (47%), Gaps = 10/172 (5%)
Query: 2   TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYS- 60
           T+ ++ E  +     YGK +      +I G    E   I+ E   +  +   F   V+  
Sbjct: 15  TEPLYFEAYRRVAESYGKPYTEDLHRRIXGVPEREGLPILXEALEIKDSLENFKKRVHEE 74
Query: 61  ---MFSDHLCKVKALPGANRLIKHLSCHGVPMALASNS-HRATIESKISYQHGWNESFSV 116
              +FS+ L   K  PG    ++ +    + +ALA+++  R  +E     +    + F V
Sbjct: 75  KKRVFSELL---KENPGVREALEFVKSKRIKLALATSTPQREALER--LRRLDLEKYFDV 129
Query: 117 IVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 168
            V  D+V+ GKP P+I+L   +RLN+ P   +V EDS  GV A K+AG+E +
Sbjct: 130 XVFGDQVKNGKPDPEIYLLVLERLNVVPEKVVVFEDSKSGVEAAKSAGIERI 181

>pdb|4EX6|A Chain A, Crystal Structure Of The Alnumycin P Phosphatase Alnb Length = 237

Iteration: 1
 Score = 58.2 bits (139), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 59/121 (48%), Gaps = 5/121 (4%)
Query: 73  PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDI 132
           PG    +  LS  G  +A+A++       + I+   G +   +VI G D V  GKP PD+
Sbjct: 107 PGVLEGLDRLSAAGFRLAMATSKVEKAARA-IAELTGLDTRLTVIAGDDSVERGKPHPDM 165
Query: 133 FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVP---SLPKQTHRYTAADEVINS 189
            L  A+ L + P   +VI D V     G+AAGM V+ V    S P +  R   AD V++S
Sbjct: 166 ALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMR-AGADTVVDS 224
Query: 190 L 190
Sbjct: 225 F 225

>pdb|1TE2|A Chain A, Putative Phosphatase Ynic From Escherichia Coli K12 Length = 226

Iteration: 1
 Score = 57.8 bits (138), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 64/123 (52%), Gaps = 2/123 (1%)
Query: 72  LPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPD 131
           LPG    +      G+ + LAS S    +E K+       +SF  +  ++++   KP P 
Sbjct: 96  LPGVREAVALCKEQGLLVGLASASPLHXLE-KVLTXFDLRDSFDALASAEKLPYSKPHPQ 154
Query: 132 IFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH-RYTAADEVINSL 190
           ++L+ A +L ++P + + +EDSV G +A KAA    + VP+   Q   R+  A+  ++SL
Sbjct: 155 VYLDCAAKLGVDPLTCVALEDSVNGXIASKAARXRSIVVPAPEAQNDPRFVLANVKLSSL 214
Query: 191 LDL 193
            +L
Sbjct: 215 TEL 217

>pdb|1MRZ|A Chain A, Crystal Structure Of A Flavin Binding Protein From Thermotoga Maritima, Tm379 Length = 293

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 68/147 (46%), Gaps = 9/147 (6%)
Query: 208 EGTLPSEPWYIG------GPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWA 261
           EG +   P Y+G      G V K    G K LG PTAN+     ++ L +   GVY    
Sbjct: 146 EGRVEEIPAYLGRYFEIEGIVHKDREFGRK-LGFPTANIDRG--NEKLVDLKRGVYLVRV 202
Query: 262 GLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPS 321
            L        VM++G+ P   +A        + +F+ D Y + L L ++ ++R E  F S
Sbjct: 203 HLPDGKKKFGVMNVGFRPTVGDARNVKYEVYILDFEGDLYGQRLKLEVLKFMRDEKKFDS 262
Query: 322 LETLIAKIHEDRKVAERALDLPLYSKY 348
           +E L A I +D K A   +D  + SK+
Sbjct: 263 IEELKAAIDQDVKSARNMIDDIINSKF 289

>pdb|4GIB|A Chain A, 2.27 Angstrom Crystal Structure Of Beta-Phosphoglucomutase (Pgmb) From Clostridium Difficile Length = 250

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
Query: 56  NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS 115
           N  Y    D +     LPG   L+  +  + + + L+S S  A     +    G ++ F 
Sbjct: 102 NNYYVSLIDEITSNDILPGIESLLIDVKSNNIKIGLSSASKNAI---NVLNHLGISDKFD 158
Query: 116 VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 170
            I  + + +  KP P+IFL +AK LN+ P + + IED+  G+ A  +A M  V V
Sbjct: 159 FIADAGKCKNNKPHPEIFLMSAKGLNVNPQNCIGIEDASAGIDAINSANMFSVGV 213

>pdb|3DV9|A Chain A, Putative Beta-Phosphoglucomutase From Bacteroides Vulgatus Length = 247

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 77/150 (51%), Gaps = 5/150 (3%)
Query: 50  AKHEFVNEVYSMFSDHL--C-KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISY 106
           A  E +  +Y   ++    C K +  PGA  ++  +   G+   + + S + ++  ++++
Sbjct: 85  ATEEEIKAIYQAKTEEFNKCPKAERXPGALEVLTKIKSEGLTPXVVTGSGQTSLLDRLNH 144
Query: 107 QHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME 166
                   ++ V + +V+ GKP+P+ +L A K+   +P+ +LVIE++ +GV AG AAG+ 
Sbjct: 145 NFPGIFQANLXVTAFDVKYGKPNPEPYLXALKKGGFKPNEALVIENAPLGVQAGVAAGIF 204
Query: 167 VVAVPSLPKQTHRYTAADEVINSLLDLRPE 196
            +AV + P   H     +E  N L    P+
Sbjct: 205 TIAVNTGP--LHDNVLLNEGANLLFHSXPD 232

>pdb|4EEK|A Chain A, Crystal Structure Of Had Family Hydrolase Dr_1622 From Deinococcus Radiodurans R1 (Target Efi-501256) With Bound Phosphate And Sodium Length = 259

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 59/110 (53%), Gaps = 15/110 (13%)
Query: 53  EFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKI-------- 104
           +F++ + + F+  +  V A+ GA   ++ L   GVP A+ SNS R  +  K+        
Sbjct: 93  DFLDVLETRFNAAMTGVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTEL 152
Query: 105 SYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV 154
           + +H ++ S+   VG      GKP PD++  AA++L + P   +VIEDSV
Sbjct: 153 AGEHIYDPSW---VGG----RGKPHPDLYTFAAQQLGILPERCVVIEDSV 195

>pdb|3FM9|A Chain A, Analysis Of The Structural Determinants Underlying Discrimination Between Substrate And Solvent In Beta- Phosphoglucomutase Catalysis Length = 221

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 56  NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS 115
           N+ Y      +      PG  +L+K L  + + +ALAS S       +     G+   F 
Sbjct: 77  NDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASKNGPFLLERMNLTGY---FD 133
Query: 116 VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 164
            I    EV   KP+PDIF+ AA  + + PS S+ +EDS  G+ A K +G
Sbjct: 134 AIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSG 182

>pdb|1LVH|A Chain A, The Structure Of Phosphorylated Beta-phosphoglucomutase From Lactoccocus Lactis To 2.3 Angstrom Resolution Length = 221

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 56  NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS 115
           N+ Y      +      PG  +L+K L  + + +ALAS S       +     G+   F 
Sbjct: 77  NDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASKNGPFLLERMNLTGY---FD 133
Query: 116 VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 164
            I    EV   KP+PDIF+ AA  + + PS S+ +EDS  G+ A K +G
Sbjct: 134 AIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSG 182

>pdb|1O03|A Chain A, Structure Of Pentavalent Phosphorous Intermediate Of An Enzyme Catalyzed Phosphoryl Transfer Reaction Observed On Cocrystallization With Glucose 6-Phosphate Length = 221

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 56  NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS 115
           N+ Y      +      PG  +L+K L  + + +ALAS S       +     G+   F 
Sbjct: 77  NDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASKNGPFLLERMNLTGY---FD 133
Query: 116 VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 164
            I    EV   KP+PDIF+ AA  + + PS S+ +EDS  G+ A K +G
Sbjct: 134 AIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSG 182

>pdb|3QUB|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Glu47ala Mutant Complexed With Sulfate Length = 243

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 85/174 (48%), Gaps = 9/174 (5%)
Query: 7   SEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVY---SMFS 63
           SE     +  +G +    E +   G+T      I+ +      A  E +  +Y   S+  
Sbjct: 43  SEAWHQVMKTHGLDLSREEAYMHAGRTGASTINIVFQRELGKEATQEEIESIYHEKSILF 102
Query: 64  DHLCKVKALPGANRLIKHLSCHGV-PMALASNSHRATIESKISYQHGWNESF--SVIVGS 120
           +   + + +PGA  L++ +   G+ PM +  +   + +E     +H +   F   ++V +
Sbjct: 103 NSYPEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLER---LEHNFPGMFHKELMVTA 159
Query: 121 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 174
            +V+ GKP+P+ +L A K+  ++   ++VIE++ +GV AG  AG+  +AV + P
Sbjct: 160 FDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGP 213

>pdb|2I1L|A Chain A, Crystal Structure Of The C2 Form Of Fad Synthetase From Thermotoga Maritima Length = 293

Iteration: 1
 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 66/147 (44%), Gaps = 9/147 (6%)
Query: 208 EGTLPSEPWYIG------GPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWA 261
           EG +   P Y+G      G V K    G K LG PTAN+     ++ L +   GVY    
Sbjct: 146 EGRVEEIPAYLGRYFEIEGIVHKDREFGRK-LGFPTANIDRG--NEKLVDLKRGVYLVRV 202
Query: 262 GLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPS 321
            L        V ++G+ P   +A        + +F+ D Y + L L ++ + R E  F S
Sbjct: 203 HLPDGKKKFGVXNVGFRPTVGDARNVKYEVYILDFEGDLYGQRLKLEVLKFXRDEKKFDS 262
Query: 322 LETLIAKIHEDRKVAERALDLPLYSKY 348
           +E L A I +D K A   +D  + SK+
Sbjct: 263 IEELKAAIDQDVKSARNXIDDIINSKF 289

>pdb|3QUQ|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, An Open Cap Conformation Length = 243

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 85/174 (48%), Gaps = 9/174 (5%)
Query: 7   SEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVY---SMFS 63
           SE     +  +G +    E +   G+T      I+ +      A  E +  +Y   S+  
Sbjct: 43  SEAWHQVMKTHGLDLSREEAYMHEGRTGASTINIVFQRELGKEATQEEIESIYHEKSILF 102
Query: 64  DHLCKVKALPGANRLIKHLSCHGV-PMALASNSHRATIESKISYQHGWNESF--SVIVGS 120
           +   + + +PGA  L++ +   G+ PM +  +   + +E     +H +   F   ++V +
Sbjct: 103 NSYPEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLER---LEHNFPGMFHKELMVTA 159
Query: 121 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 174
            +V+ GKP+P+ +L A K+  ++   ++VIE++ +GV AG  AG+  +AV + P
Sbjct: 160 FDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGP 213

>pdb|3QYP|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Glu47asn Mutant Complexed With Calcium And Phosphate Length = 243

Iteration: 1
 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 85/174 (48%), Gaps = 9/174 (5%)
Query: 7   SEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVY---SMFS 63
           SE     +  +G +    E +   G+T      I+ +      A  E +  +Y   S+  
Sbjct: 43  SEAWHQVMKTHGLDLSREEAYMHNGRTGASTINIVFQRELGKEATQEEIESIYHEKSILF 102
Query: 64  DHLCKVKALPGANRLIKHLSCHGV-PMALASNSHRATIESKISYQHGWNESF--SVIVGS 120
           +   + + +PGA  L++ +   G+ PM +  +   + +E     +H +   F   ++V +
Sbjct: 103 NSYPEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLER---LEHNFPGMFHKELMVTA 159
Query: 121 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 174
            +V+ GKP+P+ +L A K+  ++   ++VIE++ +GV AG  AG+  +AV + P
Sbjct: 160 FDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGP 213

>pdb|3QU5|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Asp11asn Mutant Length = 243

Iteration: 1
 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 85/174 (48%), Gaps = 9/174 (5%)
Query: 7   SEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVY---SMFS 63
           SE     +  +G +    E +   G+T      I+ +      A  E +  +Y   S+  
Sbjct: 43  SEAWHQVMKTHGLDLSREEAYMHEGRTGASTINIVFQRELGKEATQEEIESIYHEKSILF 102
Query: 64  DHLCKVKALPGANRLIKHLSCHGV-PMALASNSHRATIESKISYQHGWNESF--SVIVGS 120
           +   + + +PGA  L++ +   G+ PM +  +   + +E     +H +   F   ++V +
Sbjct: 103 NSYPEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLER---LEHNFPGMFHKELMVTA 159
Query: 121 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 174
            +V+ GKP+P+ +L A K+  ++   ++VIE++ +GV AG  AG+  +AV + P
Sbjct: 160 FDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGP 213

>pdb|3QUT|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Asp13asn Mutant, An Open Cap Conformation Length = 243

Iteration: 1
 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 85/174 (48%), Gaps = 9/174 (5%)
Query: 7   SEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVY---SMFS 63
           SE     +  +G +    E +   G+T      I+ +      A  E +  +Y   S+  
Sbjct: 43  SEAWHQVMKTHGLDLSREEAYMHEGRTGASTINIVFQRELGKEATQEEIESIYHEKSILF 102
Query: 64  DHLCKVKALPGANRLIKHLSCHGV-PMALASNSHRATIESKISYQHGWNESF--SVIVGS 120
           +   + + +PGA  L++ +   G+ PM +  +   + +E     +H +   F   ++V +
Sbjct: 103 NSYPEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLER---LEHNFPGMFHKELMVTA 159
Query: 121 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 174
            +V+ GKP+P+ +L A K+  ++   ++VIE++ +GV AG  AG+  +AV + P
Sbjct: 160 FDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGP 213

>pdb|3QU4|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Asp13ala Mutant Length = 243

Iteration: 1
 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 85/174 (48%), Gaps = 9/174 (5%)
Query: 7   SEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVY---SMFS 63
           SE     +  +G +    E +   G+T      I+ +      A  E +  +Y   S+  
Sbjct: 43  SEAWHQVMKTHGLDLSREEAYMHEGRTGASTINIVFQRELGKEATQEEIESIYHEKSILF 102
Query: 64  DHLCKVKALPGANRLIKHLSCHGV-PMALASNSHRATIESKISYQHGWNESF--SVIVGS 120
           +   + + +PGA  L++ +   G+ PM +  +   + +E     +H +   F   ++V +
Sbjct: 103 NSYPEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLER---LEHNFPGMFHKELMVTA 159
Query: 121 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 174
            +V+ GKP+P+ +L A K+  ++   ++VIE++ +GV AG  AG+  +AV + P
Sbjct: 160 FDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGP 213

>pdb|3R9K|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Glu47asp Mutant Complexed With Sulfate, A Closed Cap Conformation Length = 243

Iteration: 1
 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 85/174 (48%), Gaps = 9/174 (5%)
Query: 7   SEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVY---SMFS 63
           SE     +  +G +    E +   G+T      I+ +      A  E +  +Y   S+  
Sbjct: 43  SEAWHQVMKTHGLDLSREEAYMHDGRTGASTINIVFQRELGKEATQEEIESIYHEKSILF 102
Query: 64  DHLCKVKALPGANRLIKHLSCHGV-PMALASNSHRATIESKISYQHGWNESF--SVIVGS 120
           +   + + +PGA  L++ +   G+ PM +  +   + +E     +H +   F   ++V +
Sbjct: 103 NSYPEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLER---LEHNFPGMFHKELMVTA 159
Query: 121 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 174
            +V+ GKP+P+ +L A K+  ++   ++VIE++ +GV AG  AG+  +AV + P
Sbjct: 160 FDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGP 213

>pdb|4G9B|A Chain A, Crystal Structure Of Beta-Phosphoglucomutase Homolog From Escherichia Coli, Target Efi-501172, With Bound Mg, Open Lid Length = 243

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
Query: 72  LPGANRLIKHLSCHGVPMALASNSHRA-TIESKISYQHGWNESFSVIVGSDEVRTGKPSP 130
           LPG   L+  L    + + LAS S  A TI + +  +    E F+    + +++  KP P
Sbjct: 97  LPGIRSLLADLRAQQISVGLASVSLNAPTILAALELR----EFFTFCADASQLKNSKPDP 152
Query: 131 DIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 170
           +IFL A   L + P + + IED+  G+ A  A+GM  V +
Sbjct: 153 EIFLAACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGI 192

>pdb|3D6J|A Chain A, Crystal Structure Of Putative Haloacid Dehalogenase-Like Hydrolase From Bacteroides Fragilis Length = 225

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 80/182 (43%), Gaps = 12/182 (6%)
Query: 28  KIVGKTPLEEAAIIVEDYGLPCAKH-EFVNEVYSMFSDHLCKVKAL--PGANRLIKHLSC 84
           + +GKT LEE+  I+   G+  A   E   + YS  +D       +  P     + HL  
Sbjct: 47  RTIGKT-LEESFSILT--GITDADQLESFRQEYSKEADIYXNANTILFPDTLPTLTHLKK 103
Query: 85  HGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP 144
            G+ + + S  +R  I S +   H  ++ F +I+G ++V   KP P+  L A  RL   P
Sbjct: 104 QGIRIGIISTKYRFRILSFLR-NHXPDDWFDIIIGGEDVTHHKPDPEGLLLAIDRLKACP 162
Query: 145 SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTA--ADEVINS---LLDLRPEKWG 199
              L I DS +      AAG+    V S       + A   D +I++   L+ +  +K G
Sbjct: 163 EEVLYIGDSTVDAGTAAAAGVSFTGVTSGXTTAQEFQAYPYDRIISTLGQLISVPEDKSG 222
Query: 200 LP 201
            P
Sbjct: 223 CP 224

>pdb|2FDR|A Chain A, Crystal Structure Of Conserved Haloacid Dehalogenase-like Protein Of Unknown Function Atu0790 From Agrobacterium Tumefaciens Str. C58 Length = 229

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 118 VGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV----AVPSL 173
           +G+D V   KP PDIFL  A +  + P   +V+EDSV G+   +AAG  V+    A  + 
Sbjct: 137 LGADRV---KPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGXRVIGFTGASHTY 193
Query: 174 PKQTHRYT--AADEVINSLLDL 193
           P    R T   A+ VI+   DL
Sbjct: 194 PSHADRLTDAGAETVISRXQDL 215

>pdb|3KZX|A Chain A, Crystal Structure Of A Had-Superfamily Hydrolase From Ehrlichia Chaffeensis At 1.9a Resolution Length = 231

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 74  GANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIF 133
           GA  L+  L  + + MA+ SN +   + S+I +++     F  I+GS +  T KPSP+  
Sbjct: 107 GAIELLDTLKENNITMAIVSNKNGERLRSEIHHKN-LTHYFDSIIGSGDTGTIKPSPEPV 165
Query: 134 LEAAKRLNMEPSSSL-VIEDSVIGVVAGKAAG 164
           L A   +N+EPS  +  I DS+  + +   AG
Sbjct: 166 LAALTNINIEPSKEVFFIGDSISDIQSAIEAG 197

>pdb|2YY6|A Chain A, Crystal Structure Of The Phosphoglycolate Phosphatase From Aquifex Aeolicus Vf5 Length = 213

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 52/121 (42%), Gaps = 6/121 (4%)
Query: 51  KHEFVNEVYSMFSDHLCK-----VKALPGANRLIKHLSCHGVPMALASNSHRATIESKIS 105
           K +F  E   +F  H  +      K  P     ++ L   G  +A+ SN     +  KI 
Sbjct: 57  KDKFREEYVEVFRKHYLENPVVYTKPYPEIPYTLEALKSKGFKLAVVSNKLEE-LSKKIL 115
Query: 106 YQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGM 165
                +  F +IVG D     KPSP   L+  + L  EP  +L++ D+   + AGK AG 
Sbjct: 116 DILNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEPEKALIVGDTDADIEAGKRAGT 175
Query: 166 E 166
           +
Sbjct: 176 K 176

>pdb|2NYV|A Chain A, X-Ray Crystal Structure Of A Phosphoglycolate Phosphatase From Aquifex Aeolicus Length = 222

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 52/121 (42%), Gaps = 6/121 (4%)
Query: 51  KHEFVNEVYSMFSDHLCK-----VKALPGANRLIKHLSCHGVPMALASNSHRATIESKIS 105
           K +F  E   +F  H  +      K  P     ++ L   G  +A+ SN     +  KI 
Sbjct: 59  KDKFREEYVEVFRKHYLENPVVYTKPYPEIPYTLEALKSKGFKLAVVSNKLEE-LSKKIL 117
Query: 106 YQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGM 165
                +  F +IVG D     KPSP   L+  + L  EP  +L++ D+   + AGK AG 
Sbjct: 118 DILNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEPEKALIVGDTDADIEAGKRAGT 177
Query: 166 E 166
           +
Sbjct: 178 K 178

>pdb|3S6J|A Chain A, The Crystal Structure Of A Hydrolase From Pseudomonas Syringae Length = 233

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 68  KVKALPGANRLIKHLSCHGVPMALASNS--HRATIESKISYQHGWNESFSVIVGSDEVRT 125
           ++ ALPGA  L++ L    +   +A++     ATI  K + +   N+    IV  D+V  
Sbjct: 89  QIIALPGAVELLETLDKENLKWCIATSGGIDTATINLK-ALKLDINKIN--IVTRDDVSY 145
Query: 126 GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGK 161
           GKP PD+FL AAK++       LVI D++   +A +
Sbjct: 146 GKPDPDLFLAAAKKIGAPIDECLVIGDAIWDXLAAR 181

>pdb|2HDO|A Chain A, Crystal Structure Of Putative Phosphoglycolate Phosphatase (Np_784602.1) From Lactobacillus Plantarum At 1.50 A Resolution Length = 209

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/164 (21%), Positives = 71/164 (43%), Gaps = 11/164 (6%)
Query: 6   FSEVLKTFLVKYGKEWDGREKHKI---VGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMF 62
           ++ V +  L  YGK +   +  K      +    E  I   ++    A++E V       
Sbjct: 22  YTTVXREVLATYGKPFSPAQAQKTFPXAAEQAXTELGIAASEFDHFQAQYEDVX------ 75
Query: 63  SDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDE 122
           + H  +++  PG   L + L    + + + ++  R  +ES     + +    +V + +D+
Sbjct: 76  ASHYDQIELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGXR-SYPFXXRXAVTISADD 133
Query: 123 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME 166
               KP P   L A +++N+ P ++L I DSV      +AA ++
Sbjct: 134 TPKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVD 177

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	362
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	7e-76
1n08_A	163	Putative riboflavin kinase; phophoryl transferases	2e-65
1nb0_A	147	Hypothetical protein FLJ11149; beta barrel, transf	3e-65
3bnw_A	181	Riboflavin kinase, putative; APO structure, struct	5e-61
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	4e-58
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	9e-56
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	2e-53
1te2_A	226	Putative phosphatase; structural genomics, phospha	4e-52
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	2e-51
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	9e-50
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	3e-47
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	7e-46
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	9e-44
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	1e-43
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	6e-43
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	3e-41
2x0k_A	338	Riboflavin biosynthesis protein RIBF; riboflavin k	2e-28
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	6e-28
3op1_A	308	Macrolide-efflux protein; structural genomics, PSI	1e-27
1mrz_A	293	Riboflavin kinase/FMN adenylyltransferase; rossman	3e-27
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	5e-24
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	2e-23
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	3e-23
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	3e-23
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	2e-22
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	4e-22
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	4e-22
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	2e-20
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	3e-20
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	8e-20
2oda_A	196	Hypothetical protein pspto_2114; haloacid dehaloge	1e-19
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	1e-19
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	3e-19
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	5e-19
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	5e-19
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	2e-18
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	3e-18
2hsz_A	243	Novel predicted phosphatase; structural genomics,	3e-18
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	7e-18
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	9e-17
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	1e-16
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	5e-16
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	6e-16
2zg6_A	220	Putative uncharacterized protein ST2620, probable	2e-15
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	1e-14
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	3e-14
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	6e-14
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	3e-13
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	4e-13
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	2e-12
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	6e-12
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	9e-12
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	2e-10
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	2e-10
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	2e-09
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	2e-08
2p11_A	231	Hypothetical protein; putative haloacid dehalogena	2e-08
3l8h_A	179	Putative haloacid dehalogenase-like hydrolase; HAD	5e-07
2gmw_A	211	D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi	5e-07
3i28_A	555	Epoxide hydrolase 2; aromatic hydrocarbons catabol	9e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-05
2w43_A	201	Hypothetical 2-haloalkanoic acid dehalogenase; hyd	4e-06
2ho4_A	259	Haloacid dehalogenase-like hydrolase domain contai	1e-05
2x4d_A	271	HLHPP, phospholysine phosphohistidine inorganic py	2e-05
2o2x_A	218	Hypothetical protein; structural genomics, joint c	6e-05
2g80_A	253	Protein UTR4; YEL038W, UTR4 protein (unknown trans	1e-04
1yv9_A	264	Hydrolase, haloacid dehalogenase family; hypotheti	7e-04

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} Length = 250

 Score =  233 bits (597), Expect = 7e-76
 Identities = 82/207 (39%), Positives = 114/207 (55%), Gaps = 4/207 (1%)

Query: 2   TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSM 61
           T+ ++S V +    +Y K++    K  ++GK  LE A II++   LP +K E V E  + 
Sbjct: 44  TERLYSVVFQEICNRYDKKYSWDVKSLVMGKKALEAAQIIIDVLQLPMSKEELVEESQTK 103

Query: 62  FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD 121
             +       +PGA +LI HL  HG+P ALA++S  A+ + K S    +   FS IV  D
Sbjct: 104 LKEVFPTAALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSHIVLGD 163

Query: 122 --EVRTGKPSPDIFLEAAKRLNMEPSSS--LVIEDSVIGVVAGKAAGMEVVAVPSLPKQT 177
             EV+ GKP PDIFL  AKR +  P+    LV ED+  GV A  AAGM+VV VP      
Sbjct: 164 DPEVQHGKPDPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSR 223

Query: 178 HRYTAADEVINSLLDLRPEKWGLPPFQ 204
              T A  V+NSL D +PE +GLP ++
Sbjct: 224 DLTTKATLVLNSLQDFQPELFGLPSYE 250

>1n08_A Putative riboflavin kinase; phophoryl transferases, flavin cofactors, metal binding; HET: ADP; 1.60A {Schizosaccharomyces pombe} SCOP: b.43.5.1 PDB: 1n05_A* 1n07_A* 1n06_A* Length = 163

 Score =  203 bits (519), Expect = 2e-65
 Identities = 74/168 (44%), Positives = 102/168 (60%), Gaps = 8/168 (4%)

Query: 189 SLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDV 248
           +L + RPE  G        E      P    G VV G GRGSK LGIPTAN+S +   ++
Sbjct: 4   NLEEKRPEIVG-------PEKVQSPYPIRFEGKVVHGFGRGSKELGIPTANISEDAIQEL 56

Query: 249 LSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLV 308
           L    SGVYFG+A +  R V+ MVMS+GWNPY+ N  ++ E  L+    EDFY+E + ++
Sbjct: 57  LRYRDSGVYFGYAMVQKR-VFPMVMSVGWNPYYKNKLRSAEVHLIERQGEDFYEEIMRVI 115

Query: 309 IVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYLKI 356
           ++GYIRPE N+  L+ LI  IH D +VA  ++D P YS Y+ DP+ K+
Sbjct: 116 VLGYIRPELNYAGLDKLIEDIHTDIRVALNSMDRPSYSSYKKDPFFKV 163

>1nb0_A Hypothetical protein FLJ11149; beta barrel, transferase; HET: ADP; 1.70A {Homo sapiens} SCOP: b.43.5.1 PDB: 1nb9_A* 1p4m_A* 1q9s_A* Length = 147

 Score =  202 bits (517), Expect = 3e-65
 Identities = 67/142 (47%), Positives = 102/142 (71%)

Query: 215 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMS 274
           P++  G VV+G GRGSK LGIPTAN   +   ++ ++  +G+Y+GWA + +  V+KMV+S
Sbjct: 4   PYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADISTGIYYGWASVGSGDVHKMVVS 63

Query: 275 IGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRK 334
           IGWNPY+ N +K++E  ++H F EDFY E L++ IVGY+RPE NF SLE+LI+ I  D +
Sbjct: 64  IGWNPYYKNTKKSMETHIMHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDIE 123

Query: 335 VAERALDLPLYSKYRDDPYLKI 356
            A++ L+LP Y K ++D + ++
Sbjct: 124 EAKKRLELPEYLKIKEDNFFQV 145

>3bnw_A Riboflavin kinase, putative; APO structure, structural genomics, structural genomics of P protozoa consortium, SGPP, transferase; 2.40A {Trypanosoma brucei} Length = 181

 Score =  193 bits (492), Expect = 5e-61
 Identities = 51/167 (30%), Positives = 78/167 (46%), Gaps = 9/167 (5%)

Query: 203 FQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGY-SDVLSEHPSGVYFGWA 261
               +  T   +P+++ G VV G GRG   LG PTAN+  +    + L  + + V +GW 
Sbjct: 5   HHHHMRQTGSFQPFFLRGKVVHGKGRGGSQLGFPTANIGLDKDVMECLQPYKNLVVYGWG 64

Query: 262 GLSTR--------GVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYI 313
            +S          G Y    SIG+N  FD    T+EP+ LHEF  DFY   + ++++G I
Sbjct: 65  TVSQVPGKERESFGPYPFAASIGFNMQFDEKTLTVEPYFLHEFGWDFYGAVVKIIVLGEI 124

Query: 314 RPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYLKITSSK 360
           R   +F SL+ L+  I  D +     L  P   ++      +  SS 
Sbjct: 125 RSMGSFHSLQALVDTIKSDVQFTRDMLQKPQLQEFSRHSLFESPSST 171

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} Length = 214

 Score =  186 bits (475), Expect = 4e-58
 Identities = 47/188 (25%), Positives = 89/188 (47%), Gaps = 4/188 (2%)

Query: 8   EVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLC 67
           +   +FL + G   D       +G    +    I+ D            E  +   ++  
Sbjct: 25  DRRASFLGQKGISIDHLPPSFFIGGNTKQVWENILRDEYDKWDVSTLQEEYNTYKQNNPL 84

Query: 68  --KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRT 125
             K    P   +++  +   G+ + LAS+S +A I   +  ++     F +++  +E + 
Sbjct: 85  PYKELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALE-ENRLQGFFDIVLSGEEFKE 143

Query: 126 GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADE 185
            KP+P+I+L A K+LN++ S +L+IEDS  G+ AG AA +EV A+    +     +AA  
Sbjct: 144 SKPNPEIYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRD-NEFGMDQSAAKG 202

Query: 186 VINSLLDL 193
           +++SL D+
Sbjct: 203 LLDSLTDV 210

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} Length = 247

 Score =  181 bits (462), Expect = 9e-56
 Identities = 44/212 (20%), Positives = 97/212 (45%), Gaps = 12/212 (5%)

Query: 8   EVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLC 67
           E     + ++G      E +   G+T      I+        A  E +  +Y   ++   
Sbjct: 43  ESWHKIMKRFGFGLSREEAYMHEGRTGASTINIVSRRERGHDATEEEIKAIYQAKTEEFN 102

Query: 68  K---VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR 124
           K    + +PGA  ++  +   G+   + + S + ++  ++++        +++V + +V+
Sbjct: 103 KCPKAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNHNFPGIFQANLMVTAFDVK 162

Query: 125 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS--LPKQTHRYTA 182
            GKP+P+ +L A K+   +P+ +LVIE++ +GV AG AAG+  +AV +  L         
Sbjct: 163 YGKPNPEPYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEG 222

Query: 183 ADEVINSLLDLRPEKWGLPPFQDWIEGTLPSE 214
           A+ + +S+ D   + W      + ++  L  +
Sbjct: 223 ANLLFHSMPDF-NKNW------ETLQSALKQD 247

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 Length = 226

 Score =  171 bits (436), Expect = 4e-52
 Identities = 42/194 (21%), Positives = 83/194 (42%), Gaps = 5/194 (2%)

Query: 8   EVLKTFLVKYGKEWDGREKH-KIVGKTPLEEAAIIVEDYGLP-CAKHEFVNEVYSMFSDH 65
                 +   G +   R +    +G        +          ++ E V  V +     
Sbjct: 29  RAELDVMASLGVDISRRNELPDTLGLRIDMVVDLWYARQPWNGPSRQEVVERVIARAISL 88

Query: 66  LCK-VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR 124
           + +    LPG    +      G+ + LAS S    +E  ++      +SF  +  ++++ 
Sbjct: 89  VEETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLT-MFDLRDSFDALASAEKLP 147

Query: 125 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH-RYTAA 183
             KP P ++L+ A +L ++P + + +EDSV G++A KAA M  + VP+   Q   R+  A
Sbjct: 148 YSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLA 207

Query: 184 DEVINSLLDLRPEK 197
           +  ++SL +L  + 
Sbjct: 208 NVKLSSLTELTAKD 221

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A Length = 243

 Score =  170 bits (433), Expect = 2e-51
 Identities = 42/191 (21%), Positives = 87/191 (45%), Gaps = 5/191 (2%)

Query: 8   EVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH-- 65
           E     +  +G +    E +   G+T      I+ +      A  E +  +Y   S    
Sbjct: 44  EAWHQVMKTHGLDLSREEAYMHEGRTGASTINIVFQRELGKEATQEEIESIYHEKSILFN 103

Query: 66  -LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR 124
              + + +PGA  L++ +   G+   + + S + ++  ++ +         ++V + +V+
Sbjct: 104 SYPEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEHNFPGMFHKELMVTAFDVK 163

Query: 125 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS--LPKQTHRYTA 182
            GKP+P+ +L A K+  ++   ++VIE++ +GV AG  AG+  +AV +  L  Q      
Sbjct: 164 YGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAG 223

Query: 183 ADEVINSLLDL 193
           AD +  S+  L
Sbjct: 224 ADLLFPSMQTL 234

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A Length = 259

 Score =  166 bits (423), Expect = 9e-50
 Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 13/211 (6%)

Query: 2   TDGMFSEVLKTFLVKYGKEWDGRE-KHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYS 60
           ++G+ ++V ++ L + G   D  E      G+      A + + +       +F++ + +
Sbjct: 42  SEGIIAQVWQSVLAERGLHLDLTEIAMYFTGQRFDGVLAYLAQQHDFVPP-PDFLDVLET 100

Query: 61  MFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS--VIV 118
            F+  +  V A+ GA   ++ L   GVP A+ SNS R  +  K+    G  E     +  
Sbjct: 101 RFNAAMTGVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLR-VAGLTELAGEHIYD 159

Query: 119 GSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV--PSLPKQ 176
            S     GKP PD++  AA++L + P   +VIEDSV G  AG AAG  +  +  P  P  
Sbjct: 160 PSWVGGRGKPHPDLYTFAAQQLGILPERCVVIEDSVTGGAAGLAAGATLWGLLVPGHPHP 219

Query: 177 TH----RYTAADEVINSLLDLRP--EKWGLP 201
                     A  V+ S  +LR    + GL 
Sbjct: 220 DGAAALSRLGAARVLTSHAELRAALAEAGLL 250

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A Length = 221

 Score =  158 bits (403), Expect = 3e-47
 Identities = 43/197 (21%), Positives = 72/197 (36%), Gaps = 14/197 (7%)

Query: 8   EVLKTFLVKYGKEWDGRE-KHKIVGKTPLEEAAIIVEDYGLPCAKHEFV------NEVYS 60
              K    + G     R+   ++ G +  +    I++      +  EF       N+ Y 
Sbjct: 22  RAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLADKKVSAEEFKELAKRKNDNYV 81

Query: 61  MFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGS 120
                +      PG  +L+K L  + + +ALAS S       +   +      F  I   
Sbjct: 82  KMIQDVSPADVYPGILQLLKDLRSNKIKIALASASKNGPFLLE---RMNLTGYFDAIADP 138

Query: 121 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRY 180
            EV   KP+PDIF+ AA  + + PS S+ +EDS  G+ A K +G   + V          
Sbjct: 139 AEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGR----PEDL 194

Query: 181 TAADEVINSLLDLRPEK 197
                ++        E 
Sbjct: 195 GDDIVIVPDTSHYTLEF 211

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} Length = 233

 Score =  155 bits (394), Expect = 7e-46
 Identities = 57/198 (28%), Positives = 78/198 (39%), Gaps = 15/198 (7%)

Query: 8   EVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA-----KHEFV---NEVY 59
              K    +    +D     ++ G +  E    I+   G         K E +   N  Y
Sbjct: 22  LAWKHIAEQIDIPFDRDMNERLKGISREESLESILIFGGAETKYTNAEKQELMHRKNRDY 81

Query: 60  SMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVG 119
            M    L     LPG  RL+  L    + + LAS+S  A    KI  +    + F  IV 
Sbjct: 82  QMLISKLTPEDLLPGIGRLLCQLKNENIKIGLASSSRNAP---KILRRLAIIDDFHAIVD 138

Query: 120 SDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR 179
              +  GKP PDIFL AA  L++ P+    IED+  G+ A K+AGM  V V         
Sbjct: 139 PTTLAKGKPDPDIFLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAVGVGQ----GQP 194

Query: 180 YTAADEVINSLLDLRPEK 197
              AD V+    DL  E 
Sbjct: 195 MLGADLVVRQTSDLTLEL 212

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 Length = 229

 Score =  150 bits (380), Expect = 9e-44
 Identities = 45/209 (21%), Positives = 81/209 (38%), Gaps = 17/209 (8%)

Query: 2   TDGMFSEVLKTFLVKYGKEWDGREKHK-IVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYS 60
           ++ + ++V    L + G      E  +   G T       +  +  +P      +++   
Sbjct: 18  SEIIAAQVESRLLTEAGYPISVEEMGERFAGMTWKNILLQVESEASIP-LSASLLDKSEK 76

Query: 61  MFSDHLCK-VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVG 119
           +    L + VK + G    +  L     P  + SNS    ++  ++ + G    F+  + 
Sbjct: 77  LLDMRLERDVKIIDGVKFALSRL---TTPRCICSNSSSHRLDMMLT-KVGLKPYFAPHIY 132

Query: 120 SDE---VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP-- 174
           S +       KP PDIFL  A +  + P   +V+EDSV G+   +AAGM V+        
Sbjct: 133 SAKDLGADRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHT 192

Query: 175 ----KQTHRYTAADEVINSLLDLRPEKWG 199
                       A+ VI+ + DL P    
Sbjct: 193 YPSHADRLTDAGAETVISRMQDL-PAVIA 220

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} Length = 233

 Score =  150 bits (380), Expect = 1e-43
 Identities = 41/196 (20%), Positives = 69/196 (35%), Gaps = 12/196 (6%)

Query: 8   EVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFV------NEVYSM 61
              K  L            H+ +G +       +  + G+     +         + Y  
Sbjct: 26  AAWKEALDAENIPLAMWRIHRKIGMSGGLMLKSLSRETGMSITDEQAERLSEKHAQAYER 85

Query: 62  FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD 121
                  + ALPGA  L++ L    +   +A++    T    +      + +   IV  D
Sbjct: 86  LQHQ---IIALPGAVELLETLDKENLKWCIATSGGIDTATINLK-ALKLDINKINIVTRD 141

Query: 122 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS--LPKQTHR 179
           +V  GKP PD+FL AAK++       LVI D++  ++A +      V + S         
Sbjct: 142 DVSYGKPDPDLFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELE 201

Query: 180 YTAADEVINSLLDLRP 195
              A  V    LDL  
Sbjct: 202 RAGALRVYEDPLDLLN 217

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} Length = 243

 Score =  148 bits (375), Expect = 6e-43
 Identities = 43/195 (22%), Positives = 71/195 (36%), Gaps = 17/195 (8%)

Query: 11  KTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLP--------CAKHEFVNEVYSMF 62
           +    + G   D +    + G +  E    I++  G                 N +Y   
Sbjct: 28  QQIAAEIGISIDAQFNESLKGISRDESLRRILQHGGKEGDFNSQERAQLAYRKNLLYVHS 87

Query: 63  SDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDE 122
              L     LPG   L+  L    + + LAS S  A             E F+    + +
Sbjct: 88  LRELTVNAVLPGIRSLLADLRAQQISVGLASVSLNAPTILA---ALELREFFTFCADASQ 144

Query: 123 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTA 182
           ++  KP P+IFL A   L + P + + IED+  G+ A  A+GM  V + +        T 
Sbjct: 145 LKNSKPDPEIFLAACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIGA------GLTG 198

Query: 183 ADEVINSLLDLRPEK 197
           A  ++ S   L   +
Sbjct: 199 AQLLLPSTESLTWPR 213

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} Length = 275

 Score =  144 bits (366), Expect = 3e-41
 Identities = 36/206 (17%), Positives = 76/206 (36%), Gaps = 14/206 (6%)

Query: 2   TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSM 61
           +    +   + F             H   G    +  A    D+      ++   E+   
Sbjct: 49  SQPAIAAFWRDFGKDKPYFDAEHVIHISHGWRTYDAIAKFAPDFADEEYVNKLEGEIPEK 108

Query: 62  FSDHLCKVKALPGANRLIKHLSCHG-VPMALASNSHRATIESKISYQHGWNESFSVIVGS 120
           + +H      +PGA +L   L+       A+A++  R   +          +     + +
Sbjct: 109 YGEH---SIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWF--DILKIKRPEYFITA 163

Query: 121 DEVRTGKPSPDIFLEAAKRLN-------MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS- 172
           ++V+ GKP P+ +L+    L           S  +V ED+  G+ AGKAAG ++V + + 
Sbjct: 164 NDVKQGKPHPEPYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATT 223

Query: 173 LPKQTHRYTAADEVINSLLDLRPEKW 198
                 +    D ++ +   +R  ++
Sbjct: 224 FDLDFLKEKGCDIIVKNHESIRVGEY 249

>2x0k_A Riboflavin biosynthesis protein RIBF; riboflavin kinase, nucleotide-binding, transferase, ATP-BIND multifunctional enzyme; 1.95A {Corynebacterium ammoniagenes} Length = 338

 Score =  112 bits (282), Expect = 2e-28
 Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 15/137 (10%)

Query: 215 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRG------- 267
            +Y+ GPVV+G GRG K LG PTAN        +      GVY GW  +           
Sbjct: 186 HFYVTGPVVRGAGRGGKELGFPTANQYFHDTVALP---ADGVYAGWLTILPTEAPVSGNM 242

Query: 268 ----VYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLE 323
                Y   +S+G NP F + ++++E ++L + D D Y  ++ +  V ++R    F S+E
Sbjct: 243 EPEVAYAAAISVGTNPTFGDEQRSVESFVL-DRDADLYGHDVKVEFVDHVRAMEKFDSVE 301

Query: 324 TLIAKIHEDRKVAERAL 340
            L+  + +D +     L
Sbjct: 302 QLLEVMAKDVQKTRTLL 318

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} Length = 277

 Score =  109 bits (274), Expect = 6e-28
 Identities = 29/180 (16%), Positives = 65/180 (36%), Gaps = 15/180 (8%)

Query: 8   EVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLP---------CAKHEFVNEV 58
                   + G E    E  + +G    E    ++ +  +           +  E +  +
Sbjct: 35  YAFMELFKQEGIEVTQAEAREPMGTEKSEHIRRMLGNSRIANAWLSIKGQASNEEDIKRL 94

Query: 59  YSMFSDHLCK-----VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNES 113
           Y +F+    +      + +PG   +   L   G+ +   +      +   +        +
Sbjct: 95  YDLFAPIQTRIVAQRSQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYT 154

Query: 114 FSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS-LVIEDSVIGVVAGKAAGMEVVAVPS 172
            +  V + +V  G+P PD+ L+ A  L +   +  + ++D++ G+  G  AGM  V V  
Sbjct: 155 PASTVFATDVVRGRPFPDMALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSC 214

>3op1_A Macrolide-efflux protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PEG; 2.49A {Streptococcus pneumoniae} Length = 308

 Score =  109 bits (275), Expect = 1e-27
 Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 8/125 (6%)

Query: 215 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHP-SGVYFGWAGLSTRGVYKMVM 273
           P    G VV G  RG   +G PTANL     + +    P  GVY     +  +  Y+ + 
Sbjct: 189 PLPSRGMVVHGNARGRT-IGYPTANLVLLDRTYM----PADGVYVVDVEIQRQ-KYRAMA 242

Query: 274 SIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDR 333
           S+G N  FD  E   E  +  +F++D Y E + +  +  IR    F S++ L+ ++  D 
Sbjct: 243 SVGKNVTFDGEEARFEVNIF-DFNQDIYGETVMVYWLDRIRDMTKFDSVDQLVDQLKADE 301

Query: 334 KVAER 338
           +V   
Sbjct: 302 EVTRN 306

>1mrz_A Riboflavin kinase/FMN adenylyltransferase; rossmann fold, flavin binding domain, 6-stranded beta barrel nucleotide binding domain; HET: CIT; 1.90A {Thermotoga maritima} SCOP: b.43.5.1 c.26.1.3 PDB: 1s4m_A* 1t6x_A* 1t6y_A* 1t6z_A* 2i1l_A Length = 293

 Score =  107 bits (271), Expect = 3e-27
 Identities = 43/139 (30%), Positives = 64/139 (46%), Gaps = 7/139 (5%)

Query: 215 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHP-SGVYFGWAGLSTRGVYKMVM 273
            + I G V K    G K LG PTAN+       V       GVY     L        VM
Sbjct: 159 YFEIEGIVHKDREFGRK-LGFPTANIDRGNEKLVD---LKRGVYLVRVHLPDGKKKFGVM 214

Query: 274 SIGWNPYFDNAEK-TIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHED 332
           ++G+ P   +A     E ++L +F+ D Y + L L ++ ++R E  F S+E L A I +D
Sbjct: 215 NVGFRPTVGDARNVKYEVYIL-DFEGDLYGQRLKLEVLKFMRDEKKFDSIEELKAAIDQD 273

Query: 333 RKVAERALDLPLYSKYRDD 351
            K A   +D  + SK+  +
Sbjct: 274 VKSARNMIDDIINSKFEKE 292

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} Length = 137

 Score = 94.8 bits (236), Expect = 5e-24
 Identities = 25/127 (19%), Positives = 45/127 (35%), Gaps = 8/127 (6%)

Query: 70  KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPS 129
           +       L+     +GV   + SN       + I  +   N     ++ S E+   KP 
Sbjct: 18  EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIR-ELETNGVVDKVLLSGELGVEKPE 76

Query: 130 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINS 189
              F  AA  +++     ++++DS++ V     AG+  V      +       A   I  
Sbjct: 77  EAAFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVGVYYQQFDR-------AVVEIVG 129

Query: 190 LLDLRPE 196
           L  L  E
Sbjct: 130 LFGLEGE 136

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} Length = 231

 Score = 95.8 bits (239), Expect = 2e-23
 Identities = 39/190 (20%), Positives = 72/190 (37%), Gaps = 11/190 (5%)

Query: 8   EVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVY-SMFSDHL 66
                 L + G +    +    +  + + +  I +       A   + N +  S  SD+ 
Sbjct: 46  TTFYQVLDQMGYKNIDLDS---IPNSTIPKYLITLLGKRWKEATILYENSLEKSQKSDN- 101

Query: 67  CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTG 126
                  GA  L+  L  + + MA+ SN +   +     +       F  I+GS +  T 
Sbjct: 102 --FMLNDGAIELLDTLKENNITMAIVSNKNGERLR-SEIHHKNLTHYFDSIIGSGDTGTI 158

Query: 127 KPSPDIFLEAAKRLNMEPSSS-LVIEDSVIGVVAGKAAGMEVVAVP--SLPKQTHRYTAA 183
           KPSP+  L A   +N+EPS     I DS+  + +   AG   +     ++ K    +   
Sbjct: 159 KPSPEPVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGCLPIKYGSTNIIKDILSFKNF 218

Query: 184 DEVINSLLDL 193
            ++ N +  L
Sbjct: 219 YDIRNFICQL 228

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 Length = 207

 Score = 95.0 bits (237), Expect = 3e-23
 Identities = 30/185 (16%), Positives = 68/185 (36%), Gaps = 15/185 (8%)

Query: 14  LVKYGKEWDGREKHKIVGKTPLEEA-AIIVEDYGLPCAKHEFVNEVYSMFSDHLC-KVKA 71
             ++   +D  +  + + K  +++    + ED  L     E +N+V +        +V  
Sbjct: 30  FAQFSIPYDKEKVREFIFKYSVQDLLVRVAEDRNL---DVEVLNQVRAQSLAEKNAQVVL 86

Query: 72  LPGANRLIKHLSCHGVPMALASN-SHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSP 130
           +PGA  ++      G+   + ++  + A     I    G    F+ I+ S      KPSP
Sbjct: 87  MPGAREVLAWADESGIQQFIYTHKGNNAF---TILKDLGVESYFTEILTSQSGFVRKPSP 143

Query: 131 DIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSL 190
           +       +  +   ++  I D  + V   + +G++ +               +  I +L
Sbjct: 144 EAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINF------LESTYEGNHRIQAL 197

Query: 191 LDLRP 195
            D+  
Sbjct: 198 ADISR 202

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A Length = 267

 Score = 96.5 bits (240), Expect = 3e-23
 Identities = 37/229 (16%), Positives = 71/229 (31%), Gaps = 42/229 (18%)

Query: 8   EVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGL---------PCAKHEFVNEV 58
           EV      K G      E  K +G   ++    + E   +                + E+
Sbjct: 27  EVFMEIFHKRGVAITAEEARKPMGLLKIDHVRALTEMPRIASEWNRVFRQLPTEADIQEM 86

Query: 59  YSMFSDHL-----CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNES 113
           Y  F + L          + G   +I  L   G+ +   +   R  ++     +      
Sbjct: 87  YEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAK-EAALQGY 145

Query: 114 F-SVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS-LVIEDSVIGVVAGKAAGMEVVAVP 171
               +V  D+V  G+P P +  + A  L + P +  + + D+V  +  G+ AGM  V V 
Sbjct: 146 KPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVI 205

Query: 172 S-------LPKQTHRYTA------------------ADEVINSLLDLRP 195
                     ++     +                  A   I ++ +L  
Sbjct: 206 LGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTIETMQELES 254

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 Length = 190

 Score = 92.2 bits (230), Expect = 2e-22
 Identities = 33/159 (20%), Positives = 58/159 (36%), Gaps = 12/159 (7%)

Query: 14  LVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLC-KVKAL 72
           L  YG   D    ++ +  +        +E +       E   E Y              
Sbjct: 32  LALYGITQDHDSVYQALKVS----TPFAIETFA---PNLENFLEKYKENEARELEHPILF 84

Query: 73  PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDI 132
            G + L++ +S  G    L S+ +   +E  I  +      F+ +V S      KP+P+ 
Sbjct: 85  EGVSDLLEDISNQGGRHFLVSHRNDQVLE--ILEKTSIAAYFTEVVTSSSGFKRKPNPES 142

Query: 133 FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVP 171
            L   ++  +     LVI D  I + AG+AAG++     
Sbjct: 143 MLYLREKYQISS--GLVIGDRPIDIEAGQAAGLDTHLFT 179

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 Length = 209

 Score = 91.8 bits (229), Expect = 4e-22
 Identities = 27/154 (17%), Positives = 59/154 (38%), Gaps = 9/154 (5%)

Query: 46  GLPCAKHEFVNEVY-SMFSDHLCKVKALPGANRLIKHLSCHGVPMALASN-SHRATIESK 103
           G+  ++ +     Y  + + H  +++  PG   L + L    + + + ++          
Sbjct: 58  GIAASEFDHFQAQYEDVMASHYDQIELYPGITSLFEQLP-SELRLGIVTSQRRNELE--S 114

Query: 104 ISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA 163
               + +    +V + +D+    KP P   L A +++N+ P ++L I DSV      +AA
Sbjct: 115 GMRSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAA 174

Query: 164 GMEVVAVP--SLPKQTHRYTAADEVINSLLDLRP 195
            ++         P   H+           LD+  
Sbjct: 175 NVDFGLAVWGMDPNADHQ--KVAHRFQKPLDILE 206

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} Length = 225

 Score = 92.2 bits (230), Expect = 4e-22
 Identities = 36/166 (21%), Positives = 58/166 (34%), Gaps = 13/166 (7%)

Query: 47  LPCAKHEFVNEVYSMFSDH-----LCKVKALPGANRLIKHLSCHGVPMALASN-SHRATI 100
                 + +      +S              P     + HL   G+ + + S       +
Sbjct: 61  TGITDADQLESFRQEYSKEADIYMNANTILFPDTLPTLTHLKKQGIRIGIISTKYRFRIL 120

Query: 101 ESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAG 160
                  H  ++ F +I+G ++V   KP P+  L A  RL   P   L I DS +     
Sbjct: 121 --SFLRNHMPDDWFDIIIGGEDVTHHKPDPEGLLLAIDRLKACPEEVLYIGDSTVDAGTA 178

Query: 161 KAAGMEVVAVPS--LPKQTHRYTAADEVINSLLDLRP---EKWGLP 201
            AAG+    V S     Q  +    D +I++L  L     +K G P
Sbjct: 179 AAAGVSFTGVTSGMTTAQEFQAYPYDRIISTLGQLISVPEDKSGCP 224

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 Length = 234

 Score = 88.2 bits (219), Expect = 2e-20
 Identities = 31/185 (16%), Positives = 62/185 (33%), Gaps = 14/185 (7%)

Query: 24  REKHKIVGKTPLEEAAIIVEDYGLPCAK-HEFVNEVYSMFSDHL------CKVKALPGAN 76
              H   GK        ++ + GL  A+  +  ++    +            +  L G  
Sbjct: 40  TGSHDFSGKMDGAIIYEVLSNVGLERAEIADKFDKAKETYIALFRERARREDITLLEGVR 99

Query: 77  RLIKHLSCHG-VPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLE 135
            L+  LS    V + L + +  A+   K+    G +  F     +D+       P I LE
Sbjct: 100 ELLDALSSRSDVLLGLLTGNFEASGRHKLK-LPGIDHYFPFGAFADDALDRNELPHIALE 158

Query: 136 AAKRL---NMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS--LPKQTHRYTAADEVINSL 190
            A+R+   N  PS  ++I D+   +   +      +AV +     +         +  + 
Sbjct: 159 RARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNF 218

Query: 191 LDLRP 195
            +   
Sbjct: 219 AETDE 223

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} Length = 200

 Score = 86.6 bits (215), Expect = 3e-20
 Identities = 31/185 (16%), Positives = 56/185 (30%), Gaps = 24/185 (12%)

Query: 10  LKTFLVKYGKEWDGREKHKIVGKTPLEEA-AIIVEDYGLPCAKHEFVNEVYSMFSDHLCK 68
              F  ++       E     G+  L E    +V          +F   +          
Sbjct: 36  TDDFTERHRLAAPELEL----GRMTLAEYLEQVVFYQPRDFTPEDFRAVMEEQS------ 85

Query: 69  VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKP 128
            +  P    L + L      M   +N  R   E +I    G  E       S  +   KP
Sbjct: 86  -QPRPEVLALARDLG-QRYRMYSLNNEGRDLNEYRIR-TFGLGEFLLAFFTSSALGVMKP 142

Query: 129 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVIN 188
           +P ++        + P  +++++D +  V A +A GM             +   A ++  
Sbjct: 143 NPAMYRLGLTLAQVRPEEAVMVDDRLQNVQAARAVGM----------HAVQCVDAAQLRE 192

Query: 189 SLLDL 193
            L  L
Sbjct: 193 ELAAL 197

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* Length = 205

 Score = 85.4 bits (212), Expect = 8e-20
 Identities = 35/164 (21%), Positives = 60/164 (36%), Gaps = 11/164 (6%)

Query: 37  EAAIIVEDYGLPC----AKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALA 92
           E  I+     LP     AKH ++ E     +      +  PGA  L++ L+  G  + + 
Sbjct: 36  EDDILTHLAALPADESAAKHAWLLEHERDLAQGS---RPAPGAVELVRELAGRGYRLGIL 92

Query: 93  SNSHRATIESKISYQHGWNESFS-VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIE 151
           + + R      +    G  + F+   V   +    KP P   L+ A+  ++ PS  +++ 
Sbjct: 93  TRNARELAHVTLE-AIGLADCFAEADVLGRDEAPPKPHPGGLLKLAEAWDVSPSRMVMVG 151

Query: 152 DSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRP 195
           D    +  G+AAG   V V             D        LR 
Sbjct: 152 DYRFDLDCGRAAGTRTVLVN--LPDNPWPELTDWHARDCAQLRD 193

>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} Length = 196

 Score = 85.0 bits (210), Expect = 1e-19
 Identities = 20/104 (19%), Positives = 35/104 (33%), Gaps = 7/104 (6%)

Query: 69  VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKP 128
            +  PGA   +K L   G+P A       A      +           ++ +     G P
Sbjct: 35  AQLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAAPV------NDWMIAAPRPTAGWP 88

Query: 129 SPDIFLEAAKRLNMEPSSS-LVIEDSVIGVVAGKAAGMEVVAVP 171
            PD    A   LN+      ++I      + +G  AG+  + + 
Sbjct: 89  QPDACWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLA 132

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} Length = 235

 Score = 86.0 bits (213), Expect = 1e-19
 Identities = 29/195 (14%), Positives = 64/195 (32%), Gaps = 9/195 (4%)

Query: 6   FSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEA-AIIVEDYGLPCAKHEFVNEVYSMFSD 64
             +V    +    +    R +     +  L  +   +     +     E V    +    
Sbjct: 37  IKDVANAVIEVRNEIKKMRAQASEDPRKVLTGSQEALAGKLKVD---VELVKRATARAIL 93

Query: 65  HLCKVKALPGANRLIKHLSCHGVPMALASN---SHRATIESKISYQHGWNESFSVIVGSD 121
           ++ +   L G    ++ +   G+  A+  N      +     +  + G  E       +D
Sbjct: 94  NVDESLVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLE-RFGLMEFIDKTFFAD 152

Query: 122 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG-VVAGKAAGMEVVAVPSLPKQTHRY 180
           EV + KP  ++F +      ++P  SL I D+        +  GM  V +     +  + 
Sbjct: 153 EVLSYKPRKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKL 212

Query: 181 TAADEVINSLLDLRP 195
                 I S+ +L+ 
Sbjct: 213 EERGFEIPSIANLKD 227

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 Length = 206

 Score = 84.3 bits (209), Expect = 3e-19
 Identities = 22/164 (13%), Positives = 52/164 (31%), Gaps = 17/164 (10%)

Query: 31  GKTPLEE-AAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPM 89
           G+   E  A  +  +  LP +  +F +   ++F          P    ++  L   G  +
Sbjct: 57  GEISDEAFAEALCHEMALPLSYEQFSHGWQAVFVA------LRPEVIAIMHKLREQGHRV 110

Query: 90  ALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV 149
            + SN++R              ++   I  S ++   KP   I+    +     PS ++ 
Sbjct: 111 VVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTVF 170

Query: 150 IEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 193
            +D+   +      G+           +        + +    +
Sbjct: 171 FDDNADNIEGANQLGI----------TSILVKDKTTIPDYFAKV 204

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} Length = 241

 Score = 84.0 bits (208), Expect = 5e-19
 Identities = 32/158 (20%), Positives = 69/158 (43%), Gaps = 7/158 (4%)

Query: 41  IVEDYGLPCAKHEFVNEVYSMFSDHLCK-VKALPGANRLIKHLSCHGVPMALASNSHRAT 99
           ++    LP    ++++     + +     ++ +PGA +++  L   G  + + ++ +   
Sbjct: 65  LLRRLDLP-YNPKWISAGVIAYHNTKFAYLREVPGARKVLIRLKELGYELGIITDGNPVK 123

Query: 100 IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG-VV 158
              KI  +   ++ F  ++ SD     KP P IF +A K  N++P  +L++ D +   + 
Sbjct: 124 QWEKI-LRLELDDFFEHVIISDFEGVKKPHPKIFKKALKAFNVKPEEALMVGDRLYSDIY 182

Query: 159 AGKAAGMEVVAV---PSLPKQTHRYTAADEVINSLLDL 193
             K  GM+ V         ++      AD  I++L  L
Sbjct: 183 GAKRVGMKTVWFRYGKHSERELEYRKYADYEIDNLESL 220

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A Length = 222

 Score = 83.8 bits (208), Expect = 5e-19
 Identities = 36/152 (23%), Positives = 58/152 (38%), Gaps = 13/152 (8%)

Query: 52  HEFVNEVYSMFSDH-----LCKVKALPGANRLIKHLSCHGVPMALASN-SHRATIESKIS 105
            +F  E   +F  H     +   K  P     ++ L   G  +A+ SN     +   KI 
Sbjct: 60  DKFREEYVEVFRKHYLENPVVYTKPYPEIPYTLEALKSKGFKLAVVSNKLEELSK--KIL 117

Query: 106 YQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGM 165
                +  F +IVG D     KPSP   L+  + L  EP  +L++ D+   + AGK AG 
Sbjct: 118 DILNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEPEKALIVGDTDADIEAGKRAGT 177

Query: 166 EVVAVPS--LPKQTHRYTAADEVINSLLDLRP 195
           +        +   +      D  ++   DL  
Sbjct: 178 KTALALWGYVKLNSQI---PDFTLSRPSDLVK 206

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} Length = 211

 Score = 82.1 bits (203), Expect = 2e-18
 Identities = 28/173 (16%), Positives = 56/173 (32%), Gaps = 23/173 (13%)

Query: 31  GKTPLEE-AAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPM 89
           G+   EE    +    G      +  + +     +       +                +
Sbjct: 55  GRKSEEEFRTELSRYIGKELTYQQVYDALLGFLEE-------ISAEKFDYIDSLRPDYRL 107

Query: 90  ALASNSHRATIESKISYQH-----GWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP 144
            L SN++   ++  +S +        +  F  +  S ++   KP+ DIFLE      M+P
Sbjct: 108 FLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDKVYASCQMGKYKPNEDIFLEMIADSGMKP 167

Query: 145 SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEK 197
             +L I+D    V   +  G            T+     +  I ++  L  E+
Sbjct: 168 EETLFIDDGPANVATAERLGF----------HTYCPDNGENWIPAITRLLREQ 210

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} Length = 226

 Score = 81.8 bits (203), Expect = 3e-18
 Identities = 31/164 (18%), Positives = 60/164 (36%), Gaps = 15/164 (9%)

Query: 14  LVKYGKEWDGREK-HKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH-----LC 67
           L K+  + +     +K VG  PL+ +   +E Y       E        + D+     + 
Sbjct: 30  LNKFDIQVEDLSSLNKFVGP-PLKTS--FMEYYNFD---EETATVAIDYYRDYFKAKGMF 83

Query: 68  KVKALPGANRLIKHLSCHGVPMALASN-SHRATIESKISYQHGWNESFSVIVGSDEVRTG 126
           + K   G   L+  L  +G  + +A++     +   +I         F  IVGS      
Sbjct: 84  ENKVYDGIEALLSSLKDYGFHLVVATSKPTVFSK--QILEHFKLAFYFDAIVGSSLDGKL 141

Query: 127 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 170
               D+   A + LN++   +++I D    V+      +  + V
Sbjct: 142 STKEDVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGV 185

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 Length = 243

 Score = 81.9 bits (203), Expect = 3e-18
 Identities = 26/151 (17%), Positives = 49/151 (32%), Gaps = 10/151 (6%)

Query: 53  EFVNEVYSMFSDH-----LCKVKALPGANRLIKHLSCHGVPMALASN-SHRATIESKISY 106
           +        F  +         +  P     ++ L   G  +A+ +N   +      I  
Sbjct: 92  DEFKYFKRQFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQ--PILT 149

Query: 107 QHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME 166
             G +  FS ++G   +   KP P  F     +  + P   L + DS   + A  +AG  
Sbjct: 150 AFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCA 209

Query: 167 VVAVP--SLPKQTHRYTAADEVINSLLDLRP 195
           VV +            +  D + +   D+  
Sbjct: 210 VVGLTYGYNYNIPIAQSKPDWIFDDFADILK 240

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} Length = 240

 Score = 80.8 bits (200), Expect = 7e-18
 Identities = 35/152 (23%), Positives = 59/152 (38%), Gaps = 11/152 (7%)

Query: 52  HEFVNEVYSMFSDH-----LCKVKALPGANRLIKHLSCHGVPMALASN-SHRATIESKIS 105
              VN V  +F  +       K    PG   L+K+L   GV +A+ SN  + A       
Sbjct: 87  QTEVNRVLEVFKPYYADHCQIKTGPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLV-- 144

Query: 106 YQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGM 165
            +  +  SF   +G       KP+PD+  E  K L +     + I DS I +   + + M
Sbjct: 145 -EELFPGSFDFALGEKSGIRRKPAPDMTSECVKVLGVPRDKCVYIGDSEIDIQTARNSEM 203

Query: 166 EVVAVP--SLPKQTHRYTAADEVINSLLDLRP 195
           + +AV          +   A  ++++   L  
Sbjct: 204 DEIAVNWGFRSVPFLQKHGATVIVDTAEKLEE 235

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} Length = 263

 Score = 78.3 bits (193), Expect = 9e-17
 Identities = 36/147 (24%), Positives = 60/147 (40%), Gaps = 7/147 (4%)

Query: 53  EFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE 112
               ++Y  FS   C  + L GA   ++     G+ +A+ SN     +E  +    G  E
Sbjct: 90  PIAEQLYKDFSHP-CTWQVLDGAEDTLRECRTRGLRLAVISNFD-RRLEGILG-GLGLRE 146

Query: 113 SFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG-VVAGKAAGMEVVAVP 171
            F  ++ S+     KP P IF EA +  +MEP  +  + D+ +      +A GM    V 
Sbjct: 147 HFDFVLTSEAAGWPKPDPRIFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVV 206

Query: 172 ---SLPKQTHRYTAADEVINSLLDLRP 195
              +L          + ++ SL  L P
Sbjct: 207 GPQALDPVVRDSVPKEHILPSLAHLLP 233

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A Length = 260

 Score = 77.5 bits (191), Expect = 1e-16
 Identities = 30/157 (19%), Positives = 59/157 (37%), Gaps = 6/157 (3%)

Query: 41  IVEDYGLPCAKHEFVNEVYSMFSDHLCK-VKALPGANRLIKHLSCHGVPMALASNSHRAT 99
            +++        +   E Y ++     + +        ++  L    V + L +N  R T
Sbjct: 91  AIQETKGGADNRKLAEECYFLWKSTRLQHMILADDVKAMLTELR-KEVRLLLLTNGDRQT 149

Query: 100 IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG-VV 158
              KI         F  IV   E +  KP+P IF      L ++P   +++ D++   + 
Sbjct: 150 QREKI-EACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQ 208

Query: 159 AGKAAGME--VVAVPSLPKQTHRYTAADEVINSLLDL 193
            G  AG++  V    S             +++S+L+L
Sbjct: 209 GGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLEL 245

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A Length = 238

 Score = 75.9 bits (187), Expect = 5e-16
 Identities = 30/153 (19%), Positives = 57/153 (37%), Gaps = 7/153 (4%)

Query: 43  EDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIES 102
           ++YG          + Y  F +   ++  + GA  LI +L      + + +N    T   
Sbjct: 79  KEYGYEADGALL-EQKYRRFLEEGHQL--IDGAFDLISNLQ-QQFDLYIVTNGVSHTQYK 134

Query: 103 KISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL-NMEPSSSLVIEDSVIG-VVAG 160
           ++    G    F  I  S++    KP  + F    +R+       +L+I DS+   +  G
Sbjct: 135 RL-RDSGLFPFFKDIFVSEDTGFQKPMKEYFNYVFERIPQFSAEHTLIIGDSLTADIKGG 193

Query: 161 KAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 193
           + AG++   +    K           I  L +L
Sbjct: 194 QLAGLDTCWMNPDMKPNVPEIIPTYEIRKLEEL 226

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} Length = 240

 Score = 75.3 bits (186), Expect = 6e-16
 Identities = 24/164 (14%), Positives = 57/164 (34%), Gaps = 15/164 (9%)

Query: 14  LVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH-----LCK 68
           L  +G + D     + +G  PL +     E Y       +   E    + ++     + +
Sbjct: 55  LNSFGIKEDLENLDQFIGP-PLHDT--FKEYYKFE---DKKAKEAVEKYREYFADKGIFE 108

Query: 69  VKALPGANRLIKHLSCHGVPMALASN-SHRATIESKISYQHGWNESFSVIVGSDEVRTGK 127
            K       +++ L  +G  + +A++          I      +  F  I GS+   T  
Sbjct: 109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAE--TILRYFDIDRYFKYIAGSNLDGTRV 166

Query: 128 PSPDIFLEAAKRLNM-EPSSSLVIEDSVIGVVAGKAAGMEVVAV 170
              ++        N+ +    +++ D    ++  K  G++ + V
Sbjct: 167 NKNEVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGV 210

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} Length = 220

 Score = 73.2 bits (180), Expect = 2e-15
 Identities = 25/189 (13%), Positives = 63/189 (33%), Gaps = 17/189 (8%)

Query: 6   FSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH 65
             +V + +    G      E           +    +   G+       V E+       
Sbjct: 38  LRKVFRAYAKAMGMINYPDEDGLEH-----VDPKDFLYILGIY-PSERLVKELKEADIRD 91

Query: 66  LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRT 125
                        ++ L  +G  +AL SN+    +++ +  +    + F  +  S E++ 
Sbjct: 92  GE-AFLYDDTLEFLEGLKSNGYKLALVSNAS-PRVKTLLE-KFDLKKYFDALALSYEIKA 148

Query: 126 GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG-VVAGKAAGMEVVAVPSLPKQTHRYTAAD 184
            KP+P IF  A  ++      ++ + D      +  K + ++ + +     +   Y    
Sbjct: 149 VKPNPKIFGFALAKVGYP---AVHVGDIYELDYIGAKRSYVDPILL----DRYDFYPDVR 201

Query: 185 EVINSLLDL 193
           + + +L + 
Sbjct: 202 DRVKNLREA 210

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 Length = 210

 Score = 71.0 bits (175), Expect = 1e-14
 Identities = 23/164 (14%), Positives = 59/164 (35%), Gaps = 20/164 (12%)

Query: 14  LVKYGKEWDGREK-HKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH-----LC 67
             + G      +     +G  PLE +        L     + ++E   ++  +     + 
Sbjct: 30  FKELGVPSPDAKTIRGFMGP-PLESS---FATC-LS---KDQISEAVQIYRSYYKAKGIY 81

Query: 68  KVKALPGANRLIKHLSCHGVPMALASN-SHRATIESKISYQHGWNESFSVIVGSDEVRTG 126
           + +  P    L++ LS    P+ + +           ++     +  F  I GS      
Sbjct: 82  EAQLFPQIIDLLEELS-SSYPLYITTTKDTSTAQ--DMAKNLEIHHFFDGIYGSSPE--A 136

Query: 127 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 170
               D+  +A +   + P  +++I D+   ++  +  G++ +A+
Sbjct: 137 PHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAI 180

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} PDB: 1x42_A Length = 234

 Score = 70.5 bits (173), Expect = 3e-14
 Identities = 27/190 (14%), Positives = 65/190 (34%), Gaps = 7/190 (3%)

Query: 6   FSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH 65
              +L  +     + +            PL +    V          ++    + +    
Sbjct: 38  PKTLLDEYEKLTREAFSNYAGKPY---RPLRDILEEVMRKLAEKYGFKYPENFWEISLRM 94

Query: 66  LCKVKAL-PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR 124
             +   L P    ++K L      + + ++S      + +    G  + F  I  S+E  
Sbjct: 95  SQRYGELYPEVVEVLKSLK-GKYHVGMITDSDTEQAMAFL-DALGIKDLFDSITTSEEAG 152

Query: 125 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG-VVAGKAAGMEVVAVPSLPKQTHRYTAA 183
             KP P IF  A K+  ++   ++ + D+ +      K  GM  + +    ++   +   
Sbjct: 153 FFKPHPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKC 212

Query: 184 DEVINSLLDL 193
           D +++ L ++
Sbjct: 213 DFIVSDLREV 222

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A Length = 229

 Score = 69.5 bits (170), Expect = 6e-14
 Identities = 27/166 (16%), Positives = 51/166 (30%), Gaps = 23/166 (13%)

Query: 31  GKTPLEEA-AIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPM 89
           G     E    I E  G   +  +      S   D       +P     +         +
Sbjct: 78  GLITPAEFRDGIREMMGKMVSDKQIDAAWNSFLVD-------IPTYKLDLLLKLREKYVV 130

Query: 90  ALASNSHRATIE-----SKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP 144
            L SN++    +     +         + F     S E++  KP P+IF    +   ++P
Sbjct: 131 YLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKTYLSYEMKMAKPEPEIFKAVTEDAGIDP 190

Query: 145 SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSL 190
             +  I+DS I     +  G+           T+   A ++  +  
Sbjct: 191 KETFFIDDSEINCKVAQELGI----------STYTPKAGEDWSHLF 226

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} Length = 240

 Score = 67.4 bits (165), Expect = 3e-13
 Identities = 31/144 (21%), Positives = 53/144 (36%), Gaps = 5/144 (3%)

Query: 52  HEFVNEVYSMFSDHLC-KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGW 110
                     F   +  K   +P A  ++++L+     + + SN  R     K+    G 
Sbjct: 88  EALAERFSEDFFAIIPTKSGLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMR-SAGV 145

Query: 111 NESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG-VVAGKAAGMEVVA 169
           +  F  I+ S+++   KP P+IF  A      E   SL+I DS    +      GM    
Sbjct: 146 DRYFKKIILSEDLGVLKPRPEIFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAF 205

Query: 170 VPSLPKQTHRYTAADEVINSLLDL 193
                +    +      I+SL +L
Sbjct: 206 YNVTERTVFPFQ-PTYHIHSLKEL 228

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A Length = 261

 Score = 67.9 bits (165), Expect = 4e-13
 Identities = 19/136 (13%), Positives = 41/136 (30%), Gaps = 6/136 (4%)

Query: 62  FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISY--QHGWNESFSVIVG 119
           F+    K +        ++     G+ + + S+      +    +  +    E       
Sbjct: 122 FTAGRMKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHF- 180

Query: 120 SDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV--PSLPKQT 177
            D     K   + + + A  +    ++ L + D      A + A + V  V  P     T
Sbjct: 181 -DTKIGHKVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLT 239

Query: 178 HRYTAADEVINSLLDL 193
                   +I S  +L
Sbjct: 240 DDEKTYYSLITSFSEL 255

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 Length = 384

 Score = 66.4 bits (161), Expect = 2e-12
 Identities = 26/177 (14%), Positives = 50/177 (28%), Gaps = 33/177 (18%)

Query: 51  KHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGW 110
           K        + +      ++ +     L+  L   G  + +A+               G 
Sbjct: 196 KKIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFE-NLGL 254

Query: 111 NESFSV--IVGSDEVRT-----------GKPSPDIFLEAAKRLN--------------ME 143
              F    I  + +V             GKP+P  ++ A    N              + 
Sbjct: 255 LPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVN 314

Query: 144 PSSSLVIEDSVIGVVAGKAAGMEVVAV-----PSLPKQTHRYTAADEVINSLLDLRP 195
                ++ DS+  +++ +  G   +                   AD VIN L +LR 
Sbjct: 315 KDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGELRG 371

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} Length = 189

 Score = 62.9 bits (153), Expect = 6e-12
 Identities = 21/143 (14%), Positives = 49/143 (34%), Gaps = 18/143 (12%)

Query: 68  KVKALPGANRLIKHLSCHGVPMALASN---SHRATIESKISYQHGWNESFSVIVGSD--- 121
           +V     A   ++ +   G   A+ SN   S    I+  ++   G  + F  I  S+   
Sbjct: 32  EVVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLT-NFGIIDYFDFIYASNSEL 90

Query: 122 -EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG-VVAGKAAGMEVV---------AV 170
              +  KP   IF      L ++ + ++++ ++    ++    AG+  +           
Sbjct: 91  QPGKMEKPDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQD 150

Query: 171 PSLPKQTHRYTAADEVINSLLDL 193
             LP     +      +  + + 
Sbjct: 151 ERLPLVAPPFVIPVWDLADVPEA 173

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A Length = 232

 Score = 63.3 bits (154), Expect = 9e-12
 Identities = 23/152 (15%), Positives = 54/152 (35%), Gaps = 4/152 (2%)

Query: 44  DYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESK 103
            +       +      S   D   ++         ++ L   G+ +A+ SN    +I++ 
Sbjct: 69  RFTCRHLGLDLDARTRSTLCDAYLRLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAV 128

Query: 104 ISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA 163
           +S+  G  + F  ++  D V+  KP   ++  A + L ++ S+ L +  +       +  
Sbjct: 129 VSH-AGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAILFVASNAWDATGARYF 187

Query: 164 GMEVVAV--PSLPKQTHRYTAADEVINSLLDL 193
           G     +       +       D  + SL  +
Sbjct: 188 GFPTCWINRTGNVFEEMGQ-TPDWEVTSLRAV 218

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* Length = 240

 Score = 59.5 bits (144), Expect = 2e-10
 Identities = 25/151 (16%), Positives = 55/151 (36%), Gaps = 2/151 (1%)

Query: 44  DYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESK 103
            + L     E    +         ++ A P A   ++ L   G  +A+ SN +   +++ 
Sbjct: 79  TFALRTYHLEDRKGLKDRLMSAYKELSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAA 138

Query: 104 ISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA 163
           +      +      + +D+++  KP P I+  A  RL + P+    +  +   +      
Sbjct: 139 LKA-SKLDRVLDSCLSADDLKIYKPDPRIYQFACDRLGVNPNEVCFVSSNAWDLGGAGKF 197

Query: 164 GMEVVAVP-SLPKQTHRYTAADEVINSLLDL 193
           G   V +        + +      +NSL +L
Sbjct: 198 GFNTVRINRQGNPPEYEFAPLKHQVNSLSEL 228

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A Length = 253

 Score = 59.5 bits (144), Expect = 2e-10
 Identities = 27/127 (21%), Positives = 49/127 (38%), Gaps = 6/127 (4%)

Query: 81  HLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL 140
                 +  A+ SN     +++ ++   G  +SF  ++  D  R  KP PD +    + L
Sbjct: 102 LAELAPLKRAILSNGAPDMLQALVAN-AGLTDSFDAVISVDAKRVFKPHPDSYALVEEVL 160

Query: 141 NMEPSSSLVIEDSVIGVVAGKAAGMEVVAV-----PSLPKQTHRYTAADEVINSLLDLRP 195
            + P+  L +  +   V   K  G  V  V      +L ++    T A   +   L +R 
Sbjct: 161 GVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMRE 220

Query: 196 EKWGLPP 202
           E +   P
Sbjct: 221 ETYAEAP 227

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} Length = 251

 Score = 56.6 bits (136), Expect = 2e-09
 Identities = 26/196 (13%), Positives = 55/196 (28%), Gaps = 20/196 (10%)

Query: 6   FSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH 65
             + L     +  K +    K        + E AI + +  +     + + E+      H
Sbjct: 53  MQQHLLAVERRNLKIFGYGAKGMT---LSMIETAIELTEARIEARDIQRIVEIGRATLQH 109

Query: 66  LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRT 125
              V+ + G    +  ++     + L +       E KI  Q G ++ F  I        
Sbjct: 110 --PVEVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIE-QSGLSDLFPRIEVV----- 160

Query: 126 GKPSPDIFLEAAKRLNMEPSSSLVIEDSVI-GVVAGKAAGMEVVAVPSLPKQTHRYTAAD 184
            +  P  +       ++     ++I +S+   V    A G   +  P      H      
Sbjct: 161 SEKDPQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGV 220

Query: 185 EV-------INSLLDL 193
                    +      
Sbjct: 221 AADEPRLREVPDPSGW 236

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* Length = 282

 Score = 53.6 bits (128), Expect = 2e-08
 Identities = 22/153 (14%), Positives = 43/153 (28%), Gaps = 9/153 (5%)

Query: 51  KHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMAL-----ASNSHRATIESKIS 105
                N +          +K       ++  L   G    L     A  +H       + 
Sbjct: 123 NALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLG 182

Query: 106 YQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS-LVIEDSVIGVVAGKAAG 164
               ++          +    KP    F +A K   +    +   I+DS   +  G   G
Sbjct: 183 IADLFDGLTYCDYSRTDTLVCKPHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLG 242

Query: 165 MEVVAV---PSLPKQTHRYTAADEVINSLLDLR 194
           M+         + +   +      VI+ +L+L 
Sbjct: 243 MKTCIHLVENEVNEILGQTPEGAIVISDILELP 275

>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} Length = 231

 Score = 53.3 bits (127), Expect = 2e-08
 Identities = 31/202 (15%), Positives = 71/202 (35%), Gaps = 20/202 (9%)

Query: 3   DGMFSEVLKTFLVKYGKEWDGR---EKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVY 59
           D + +++    + ++G +   R       +  +    +    ++ Y L   +   +  + 
Sbjct: 26  DHVLADLRAHMMREFGAQNSARYWEIFETLRTELGYADYLGALQRYRLEQPRDTRLLLMS 85

Query: 60  SMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVG 119
           S   D+    +  PGA   ++HL   G P  + S+        KI+ + G  +       
Sbjct: 86  SFLIDYPFASRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIA-RSGLWDEV----- 138

Query: 120 SDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA-GMEVVAV-------P 171
            +         ++ L+            ++++D +  + A K A G  +  V        
Sbjct: 139 -EGRVLIYIHKELMLDQVMEC-YPARHYVMVDDKLRILAAMKKAWGARLTTVFPRQGHYA 196

Query: 172 SLPKQTHRYTAADEVINSLLDL 193
             PK+   +  AD  +  + DL
Sbjct: 197 FDPKEISSHPPADVTVERIGDL 218

>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} Length = 179

 Score = 48.4 bits (116), Expect = 5e-07
 Identities = 13/70 (18%), Positives = 25/70 (35%), Gaps = 4/70 (5%)

Query: 127 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS----LPKQTHRYTA 182
           KP P ++ + A+R +++ +    + DS+  + A   AG     V +              
Sbjct: 101 KPLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPE 160

Query: 183 ADEVINSLLD 192
              V   L  
Sbjct: 161 GTRVCEDLAA 170

>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* Length = 211

 Score = 48.8 bits (117), Expect = 5e-07
 Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 2/69 (2%)

Query: 127 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME-VVAVPS-LPKQTHRYTAAD 184
           KP P + L A   L+++ ++S ++ D +  + A  AA +   V V +  P       AAD
Sbjct: 131 KPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAAD 190

Query: 185 EVINSLLDL 193
            V+NSL DL
Sbjct: 191 WVLNSLADL 199

>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* Length = 555

 Score = 49.5 bits (118), Expect = 9e-07
 Identities = 27/153 (17%), Positives = 52/153 (33%), Gaps = 8/153 (5%)

Query: 31  GKTPLEEAAIIVEDYGLPCAKHEFVN-----EVYSMFSDHLCKVKALPGANRLIKHLSCH 85
           G+  L +   ++E+    C++   V       +  +F   +   K      +    L   
Sbjct: 56  GEITLSQWIPLMEENCRKCSETAKVCLPKNFSIKEIFDKAISARKINRPMLQAALMLRKK 115

Query: 86  GVPMALASNS---HRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM 142
           G   A+ +N+    RA  +            F  ++ S +V   KP P I+      L  
Sbjct: 116 GFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKA 175

Query: 143 EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPK 175
            PS  + ++D    +   +  GM  + V     
Sbjct: 176 SPSEVVFLDDIGANLKPARDLGMVTILVQDTDT 208

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.5 bits (117), Expect = 1e-06
 Identities = 60/411 (14%), Positives = 117/411 (28%), Gaps = 116/411 (28%)

Query: 31  GKTPLEEAAIIVEDYGLPCAKHEFVNEVYSM-FSDHLCKVKALPGANRLIKHLSCHGVPM 89
           GKT +  A  +   Y + C       +++ +   +       L    +L+  +  +    
Sbjct: 162 GKTWV--ALDVCLSYKVQCK---MDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSR 216

Query: 90  ALASNSHRATIESKI----------SYQHG-------WN----ESFSV---IVGSDEVRT 125
           +  S++ +  I S             Y++         N     +F++   I+    + T
Sbjct: 217 SDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKIL----LTT 272

Query: 126 GKPSPDIFLEAA--KRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAA 183
                  FL AA    ++++  S  +  D V  ++  K        +P     T+    +
Sbjct: 273 RFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLL-KYLDCRPQDLPREVLTTNPRRLS 331

Query: 184 DEVINSLLDLRPEKW------GLPPFQDWIEGTL----PSE--PWY-----------IGG 220
             +I   +      W              IE +L    P+E    +           I  
Sbjct: 332 --IIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHI-- 387

Query: 221 PVVKGLGRGSKVLGIPTANLSTEGYSDVLSE-HPSGVYFGWAGLSTRGVYKMVMSIGWNP 279
           P        + +L +   ++       V+++ H   +       ST  +  +        
Sbjct: 388 P--------TILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSI-------- 431

Query: 280 YFDNAEKTIEPWLLH-----------EFD-EDFYDEEL----------HLVIVGYIRPEA 317
           Y +   K    + LH            FD +D     L          HL  + +     
Sbjct: 432 YLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMT 491

Query: 318 NFP----SLETLIAKI-HEDRKVAERA------LDLPLYSKY--RDDPYLK 355
            F         L  KI H+                L  Y  Y   +DP  +
Sbjct: 492 LFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYE 542

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.8 bits (105), Expect = 4e-05
 Identities = 44/348 (12%), Positives = 98/348 (28%), Gaps = 115/348 (33%)

Query: 6   FSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH 65
           + ++L  F   +   +D ++                V+D      K     E      DH
Sbjct: 18  YKDILSVFEDAFVDNFDCKD----------------VQDM----PKSILSKEEI----DH 53

Query: 66  LCKVK-ALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR 124
           +   K A+ G  RL   L              +  +E  +   + +      ++   +  
Sbjct: 54  IIMSKDAVSGTLRLFWTLLSKQ------EEMVQKFVEEVLRINYKF------LMSPIKTE 101

Query: 125 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAAD 184
             +PS    +   +R  +   + +  + +V                        R     
Sbjct: 102 QRQPSMMTRMYIEQRDRLYNDNQVFAKYNV-----------------------SRLQPYL 138

Query: 185 EVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKG-LGRGSKVLGIPTANLSTE 243
           ++  +LL+LRP K                    +   ++ G LG G   + +        
Sbjct: 139 KLRQALLELRPAK-------------------NV---LIDGVLGSGKTWVALDVCL---- 172

Query: 244 GYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDE 303
               V  +    ++  W  L      + V+ +                LL++ D ++   
Sbjct: 173 -SYKVQCKMDFKIF--WLNLKNCNSPETVLEMLQK-------------LLYQIDPNWTSR 216

Query: 304 ELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDD 351
             H         +    S++  + ++ + +   E  L L L      +
Sbjct: 217 SDHS-----SNIKLRIHSIQAELRRLLKSKPY-ENCL-LVL-----LN 252

>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A Length = 201

 Score = 46.0 bits (109), Expect = 4e-06
 Identities = 19/111 (17%), Positives = 41/111 (36%), Gaps = 6/111 (5%)

Query: 85  HGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP 144
               +   SN     ++  +  ++G    F  I  ++ V+  KPSP ++      +    
Sbjct: 87  EIAEVYALSNGSINEVKQHLE-RNGLLRYFKGIFSAESVKEYKPSPKVYKYFLDSIG--A 143

Query: 145 SSSLVIEDSVIGVVAGKAAGMEVVAV--PSLPKQTHRYTAADEVINSLLDL 193
             + ++  +   V+  K AGM  + V   +           D ++N   +L
Sbjct: 144 KEAFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVD-PIGGKPDVIVNDFKEL 193

>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A Length = 259

 Score = 44.8 bits (107), Expect = 1e-05
 Identities = 21/78 (26%), Positives = 30/78 (38%), Gaps = 15/78 (19%)

Query: 126 GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG-VVAGKAAGMEVVAVPSLPKQTHRYTAAD 184
           GKP    FLEA +  +  P  +++I D     V   +  GM  + V     +T +Y AAD
Sbjct: 178 GKPEKTFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGILV-----KTGKYKAAD 232

Query: 185 E---------VINSLLDL 193
           E            S    
Sbjct: 233 EEKINPPPYLTCESFPHA 250

>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} Length = 271

 Score = 44.5 bits (106), Expect = 2e-05
 Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 15/78 (19%)

Query: 126 GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG-VVAGKAAGMEVVAVPSLPKQTHRYTAAD 184
           GKPSP+ F  A + + +E   +++I D ++G V   +  GM  + V     +T ++  +D
Sbjct: 189 GKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQV-----RTGKFRPSD 243

Query: 185 E---------VINSLLDL 193
           E          +++L + 
Sbjct: 244 EHHPEVKADGYVDNLAEA 261

>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 Length = 218

 Score = 42.7 bits (101), Expect = 6e-05
 Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 5/71 (7%)

Query: 127 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV-----PSLPKQTHRYT 181
           KP+P + +EA KRL ++   SL++ D +  + AGK AG+    +        P    R  
Sbjct: 137 KPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPL 196

Query: 182 AADEVINSLLD 192
                +  LL 
Sbjct: 197 RDSSELGDLLA 207

>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 Length = 253

 Score = 42.1 bits (98), Expect = 1e-04
 Identities = 8/67 (11%), Positives = 19/67 (28%)

Query: 127 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEV 186
           K     +    + +  + S  L + D+ + + A    G+                   +V
Sbjct: 187 KTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQV 246

Query: 187 INSLLDL 193
             +   L
Sbjct: 247 YKNFETL 253

>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 Length = 264

 Score = 39.8 bits (94), Expect = 7e-04
 Identities = 18/81 (22%), Positives = 31/81 (38%), Gaps = 15/81 (18%)

Query: 126 GKPSPDIFLEAAKRLNMEPSSSLVIEDSV---IGVVAGKAAGMEVVAVPS-------LPK 175
           GKP   I   A   L +E    +++ D+    I   +G   G++ + V S       +P 
Sbjct: 182 GKPKAIIMERAIAHLGVEKEQVIMVGDNYETDI--QSGIQNGIDSLLVTSGFTPKSAVPT 239

Query: 176 QTHRYTAADEVINSLLDLRPE 196
                     V++SL +   E
Sbjct: 240 LPTP---PTYVVDSLDEWTFE 257

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	362
3bnw_A	181	Riboflavin kinase, putative; APO structure, struct	100.0
2x0k_A	338	Riboflavin biosynthesis protein RIBF; riboflavin k	100.0
3op1_A	308	Macrolide-efflux protein; structural genomics, PSI	100.0
1n08_A	163	Putative riboflavin kinase; phophoryl transferases	100.0
1nb0_A	147	Hypothetical protein FLJ11149; beta barrel, transf	100.0
1mrz_A	293	Riboflavin kinase/FMN adenylyltransferase; rossman	100.0
3kbb_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.93
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	99.92
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	99.91
4gib_A	250	Beta-phosphoglucomutase; rossmann fold, HAD-like,	99.91
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.89
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	99.89
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	99.89
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	99.88
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	99.87
4ex6_A	237	ALNB; modified rossman fold, phosphatase, magnesiu	99.87
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	99.87
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	99.86
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	99.86
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	99.85
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	99.85
2hsz_A	243	Novel predicted phosphatase; structural genomics,	99.85
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	99.84
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	99.84
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	99.83
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	99.83
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	99.82
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	99.82
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	99.81
1te2_A	226	Putative phosphatase; structural genomics, phospha	99.81
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	99.81
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	99.81
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	99.8
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	99.8
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	99.8
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	99.8
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	99.79
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	99.79
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	99.79
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	99.79
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	99.78
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	99.78
2g80_A	253	Protein UTR4; YEL038W, UTR4 protein (unknown trans	99.78
3umb_A	233	Dehalogenase-like hydrolase; 2.20A {Ralstonia sola	99.76
3um9_A	230	Haloacid dehalogenase, type II; haloacid dehalogen	99.76
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	99.75
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	99.75
3l8h_A	179	Putative haloacid dehalogenase-like hydrolase; HAD	99.75
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	99.75
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	99.74
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	99.74
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	99.74
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	99.74
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	99.73
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	99.73
2oda_A	196	Hypothetical protein pspto_2114; haloacid dehaloge	99.73
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	99.73
3umg_A	254	Haloacid dehalogenase; defluorinase, hydrolase; 2.	99.73
2zg6_A	220	Putative uncharacterized protein ST2620, probable	99.72
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	99.72
3umc_A	254	Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru	99.72
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	99.71
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	99.71
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	99.71
3vay_A	230	HAD-superfamily hydrolase; rossmann fold, haloacid	99.71
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	99.7
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	99.7
2gmw_A	211	D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi	99.69
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	99.69
2w43_A	201	Hypothetical 2-haloalkanoic acid dehalogenase; hyd	99.69
2fpr_A	176	Histidine biosynthesis bifunctional protein HISB;	99.67
2o2x_A	218	Hypothetical protein; structural genomics, joint c	99.65
3i28_A	555	Epoxide hydrolase 2; aromatic hydrocarbons catabol	99.64
2p11_A	231	Hypothetical protein; putative haloacid dehalogena	99.63
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	99.58
1nnl_A	225	L-3-phosphoserine phosphatase; PSP, HPSP, phospho-	99.56
3m1y_A	217	Phosphoserine phosphatase (SERB); NYSGXRC, PSI II,	99.55
1rku_A	206	Homoserine kinase; phosphoserine phosphatase, phos	99.54
1ltq_A	301	Polynucleotide kinase; phosphatase, alpha/beta, P-	99.5
4eze_A	317	Haloacid dehalogenase-like hydrolase; magnesium bi	99.48
2c4n_A	250	Protein NAGD; nucleotide phosphatase, HAD superfam	99.46
3zvl_A	416	Bifunctional polynucleotide phosphatase/kinase; hy	99.45
1yv9_A	264	Hydrolase, haloacid dehalogenase family; hypotheti	99.45
3fvv_A	232	Uncharacterized protein; unknown function, structu	99.44
2yj3_A	263	Copper-transporting ATPase; hydrolase, P-type ATPa	99.17
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	99.43
2i7d_A	193	5'(3')-deoxyribonucleotidase, cytosolic type; hydr	99.41
2fea_A	236	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	99.41
2ho4_A	259	Haloacid dehalogenase-like hydrolase domain contai	99.4
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	99.37
2b82_A	211	APHA, class B acid phosphatase; DDDD acid phosphat	99.37
2p9j_A	162	Hypothetical protein AQ2171; secsg, riken, PSI, st	99.36
3p96_A	415	Phosphoserine phosphatase SERB; ssgcid, structural	99.35
1q92_A	197	5(3)-deoxyribonucleotidase; alpha-beta rossman fol	99.35
3n28_A	335	Phosphoserine phosphatase; HAD family hydrolase, s	99.34
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	99.31
3nvb_A	387	Uncharacterized protein; protein FKBH, protein fkb	99.29
3kd3_A	219	Phosphoserine phosphohydrolase-like protein; csgid	99.28
3a1c_A	287	Probable copper-exporting P-type ATPase A; ATP-bin	99.26
1l7m_A	211	Phosphoserine phosphatase; rossmann fold, four-hel	99.26
3e8m_A	164	Acylneuraminate cytidylyltransferase; 2-keto-3-deo	99.24
1vjr_A	271	4-nitrophenylphosphatase; TM1742, structural genom	99.23
4ap9_A	201	Phosphoserine phosphatase; hydrolase, haloacid deh	99.19
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	99.17
3n1u_A	191	Hydrolase, HAD superfamily, subfamily III A; struc	99.16
3mn1_A	189	Probable YRBI family phosphatase; structural genom	99.16
1k1e_A	180	Deoxy-D-mannose-octulosonate 8-phosphate phosphat;	99.16
3ij5_A	211	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	99.15
2r8e_A	188	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	99.14
3skx_A	280	Copper-exporting P-type ATPase B; P1B-ATPase, ATP	99.14
3n07_A	195	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	99.11
3mmz_A	176	Putative HAD family hydrolase; structural genomics	99.1
3bwv_A	180	Putative 5'(3')-deoxyribonucleotidase; NP_764060.1	99.05
3epr_A	264	Hydrolase, haloacid dehalogenase-like family; stru	99.05
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	99.04
2x4d_A	271	HLHPP, phospholysine phosphohistidine inorganic py	99.03
3qgm_A	268	P-nitrophenyl phosphatase (PHO2); structural genom	98.95
3pdw_A	266	Uncharacterized hydrolase YUTF; structural genomic	98.94
3ewi_A	168	N-acylneuraminate cytidylyltransferase; beta barre	98.86
2i33_A	258	Acid phosphatase; HAD superfamily, hydrolase; 1.57	98.84
3gyg_A	289	NTD biosynthesis operon putative hydrolase NTDB; P	98.75
2jc9_A	555	Cytosolic purine 5'-nucleotidase; cytosolic 5-prim	98.52
2rbk_A	261	Putative uncharacterized protein; HAD-like phospha	98.31
1wr8_A	231	Phosphoglycolate phosphatase; alpha / beta core do	98.19
4dw8_A	279	Haloacid dehalogenase-like hydrolase; HAD, putativ	98.06
3kc2_A	352	Uncharacterized protein YKR070W; HAD-like, mitocho	98.03
3pct_A	260	Class C acid phosphatase; hydrolase, outer membran	98.01
1rlm_A	271	Phosphatase; HAD family, rossman fold, hydrolase;	97.97
3ocu_A	262	Lipoprotein E; hydrolase, outer membrane; HET: NMN	97.95
1l6r_A	227	Hypothetical protein TA0175; structural genomics,	97.93
3fzq_A	274	Putative hydrolase; YP_001086940.1, putative haloa	97.8
3dnp_A	290	Stress response protein YHAX; structural PSI-2, pr	97.78
3qle_A	204	TIM50P; chaperone, mitochondrion, preprotein trans	97.76
4g63_A	470	Cytosolic IMP-GMP specific 5'-nucleotidase; struct	97.69
3mpo_A	279	Predicted hydrolase of the HAD superfamily; SGX, P	97.61
4fe3_A	297	Cytosolic 5'-nucleotidase 3; substrate complex, HA	97.54
3j08_A	645	COPA, copper-exporting P-type ATPase A; copper tra	97.47
2pq0_A	258	Hypothetical conserved protein GK1056; hyopthetica	97.46
4gxt_A	385	A conserved functionally unknown protein; structur	97.39
3dao_A	283	Putative phosphatse; structural genomics, joint ce	97.33
3ar4_A	995	Sarcoplasmic/endoplasmic reticulum calcium ATPase;	97.29
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	97.12
3l7y_A	304	Putative uncharacterized protein SMU.1108C; hydrol	97.11
3pgv_A	285	Haloacid dehalogenase-like hydrolase; structural g	97.1
3rfu_A	736	Copper efflux ATPase; alpha helical, CPC, CXXC, AT	97.08
3zx4_A	259	MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd	96.93
3ef0_A	372	RNA polymerase II subunit A C-terminal domain phos	96.83
1y8a_A	332	Hypothetical protein AF1437; structural genomics,	96.8
2zxe_A	1028	Na, K-ATPase alpha subunit; membrane protein, ION	96.69
3r4c_A	268	Hydrolase, haloacid dehalogenase-like hydrolase; h	96.5
1nf2_A	268	Phosphatase; structural proteomics, HAD NEW fold,	96.01
3ixz_A	1034	Potassium-transporting ATPase alpha; ION pump, H+,	95.71
1nrw_A	288	Hypothetical protein, haloacid dehalogenase-like h	95.68
1mhs_A	920	Proton pump, plasma membrane ATPase; ION transport	95.36
1rkq_A	282	Hypothetical protein YIDA; two domain structure wi	95.36
3b8c_A	885	ATPase 2, plasma membrane-type; P-type ATPase, pro	95.31
3shq_A	320	UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila	95.24
1s2o_A	244	SPP, sucrose-phosphatase; phosphohydrolase, HAD su	95.07
4as2_A	327	Phosphorylcholine phosphatase; hydrolase, HAD supe	94.99
2b30_A	301	Pvivax hypothetical protein; SGPP, structural geno	94.98
3ef1_A	442	RNA polymerase II subunit A C-terminal domain phos	94.28
3kc2_A	352	Uncharacterized protein YKR070W; HAD-like, mitocho	94.2
2zos_A	249	MPGP, mannosyl-3-phosphoglycerate phosphatase; hal	93.2
1xvi_A	275	MPGP, YEDP, putative mannosyl-3-phosphoglycerate p	91.97
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	89.79
3geb_A	274	EYES absent homolog 2; hydrolase, activator, alter	89.12
3glv_A	143	Lipopolysaccharide core biosynthesis protein; stru	86.01
2obb_A	142	Hypothetical protein; structural genomics, PSI-2,	85.36
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	85.31

>3bnw_A Riboflavin kinase, putative; APO structure, structural genomics, structural genomics of P protozoa consortium, SGPP, transferase; 2.40A {Trypanosoma brucei}

Probab=100.00  E-value=3.8e-51  Score=348.54  Aligned_cols=152  Identities=33%  Similarity=0.586  Sum_probs=125.4

Q ss_pred             ccCCCCCCceeEeeeeeeccCCCccccCccccccCCC---CccccCCCCCCeEEEEEEEEcc--------CeEEEEEEEe
Q 017995          207 IEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTE---GYSDVLSEHPSGVYFGWAGLST--------RGVYKMVMSI  275 (362)
Q Consensus       207 ~a~~lLgrp~~i~g~v~~G~~~g~~~lg~pTaNi~~~---~~~~~lp~~~~GvY~~~~~~~~--------~~~~~~~~~i  275 (362)
                      +-..||||||+++|+|+||+++||++||||||||.+.   ....++|  +.|||++|+.+++        +.+|+||+||
T Consensus         9 ~~~~lLGrpy~i~G~Vv~G~~rGrr~LGfPTANl~l~~~~~~~~~~p--~~GVYa~~v~~~~~~~~~~~~~~~~~gv~nI   86 (181)
T 3bnw_A            9 MRQTGSFQPFFLRGKVVHGKGRGGSQLGFPTANIGLDKDVMECLQPY--KNLVVYGWGTVSQVPGKERESFGPYPFAASI   86 (181)
T ss_dssp             CCCCTTSCCEEEEEEEEC------CCSCCCCCEECCCHHHHHHHGGG--TTEEEEEEEEEEEETTEEEEEEEEEEEEEEE
T ss_pred             HHHHhCCCCeEEEEEEEeCCccCccccCCccccccccccccccccCC--CCEEEEEEEEECCcccccccCCceeEEEEEe
Confidence            3567999999999999999999966799999999842   2112335  4899999998854        3789999999


Q ss_pred             CCCCcccCCceeEeEeeccCCCcccCCCeEEEEEeeecCCCCCCCCHHHHHHHHHHHHHHHHHHcCCccccCccCCCCcc
Q 017995          276 GWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYLK  355 (362)
Q Consensus       276 G~~pt~~~~~~~~E~~~~~~f~~~~yg~~~~v~~~~~iR~e~~f~~~~~L~~qi~~d~~~~~~~~~~~~~~~~~~~~~~~  355 (362)
                      |+||||++..++||||||+||++||||++|+|.|++|||+|+||+|+|+|++||++|++.||++|+.+.|+.|++|+||.
T Consensus        87 G~nPTf~~~~~~vEvhilhDF~~DlYG~~i~V~fl~~LR~E~kF~sle~L~~QI~~Di~~Ar~~l~~~~~~~~~~~~~f~  166 (181)
T 3bnw_A           87 GFNMQFDEKTLTVEPYFLHEFGWDFYGAVVKIIVLGEIRSMGSFHSLQALVDTIKSDVQFTRDMLQKPQLQEFSRHSLFE  166 (181)
T ss_dssp             ECC------CCEEEEEESSCCSSCCTTCEEEEEEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHTSHHHHGGGGCTTTS
T ss_pred             cCCCeECCCeeEEEEEEcCCCCCccCCCEEEEEEehhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCccccccccCcccc
Confidence            99999987677899999944999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCC
Q 017995          356 ITSSK  360 (362)
Q Consensus       356 ~~~~~  360 (362)
                      +||||
T Consensus       167 ~~~~~  171 (181)
T 3bnw_A          167 SPSST  171 (181)
T ss_dssp             CCCCC
T ss_pred             Ccccc
Confidence            99987

>2x0k_A Riboflavin biosynthesis protein RIBF; riboflavin kinase, nucleotide-binding, transferase, ATP-BIND multifunctional enzyme; 1.95A {Corynebacterium ammoniagenes}

Probab=100.00  E-value=2.3e-51  Score=387.83  Aligned_cols=243  Identities=22%  Similarity=0.347  Sum_probs=198.9

Q ss_pred             CCchHHHHHHHHHHCCCcEEEE--------cCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCC---CHHHHHHHHHH
Q 017995           71 ALPGANRLIKHLSCHGVPMALA--------SNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKP---SPDIFLEAAKR  139 (362)
Q Consensus        71 ~~pgv~~~L~~L~~~g~~~~i~--------S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp---~p~~~~~~~~~  139 (362)
                      ++....+=++.|++.|+...++        +.++++|++.+|.+.++.    +.+++|+|+++|+.   +.+.+...   
T Consensus        70 ~L~~~~eR~~ll~~~gVD~v~v~~F~~~~a~ls~e~Fi~~il~~~l~~----~~ivvG~Df~FG~~r~g~~~~L~~~---  142 (338)
T 2x0k_A           70 GITTLAERFALAESFGIDGVLVIDFTRELSGTSPEKYVEFLLEDTLHA----SHVVVGANFTFGENAAGTADSLRQI---  142 (338)
T ss_dssp             BSSCHHHHHHHHHHTTCSEEEEECTTTSSSSCCHHHHHHHCCCCCTCE----EEEEEETTCEESGGGCEEHHHHHHH---
T ss_pred             CCCCHHHHHHHHHhcCCCEEEEccccHHHHhCCHHHHHHHHHHhhcCC----CEEEEeecCCCCCCCCCCHHHHHHH---
Confidence            3445666778888889887665        567888888755455555    79999999998865   34444332   


Q ss_pred             cCCCCCcEEEEecCHhhHHHHHHcCCEEEEEcCCCCccccccchhHhhcccccccccccCCCCCCccccCCCCCCceeEe
Q 017995          140 LNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIG  219 (362)
Q Consensus       140 ~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~~~~~~~~~~ssa~~vi~~l~el~~~~~~l~~~~~~~a~~lLgrp~~i~  219 (362)
                                          +++ |+.++.++....++..+|| +.+++.+.++++..          |+.||||||+++
T Consensus       143 --------------------~~~-g~~V~~v~~~~~~~~~ISS-T~IR~~L~~G~i~~----------a~~lLGrpy~i~  190 (338)
T 2x0k_A          143 --------------------CQS-RLTVDVIDLLDDEGVRISS-TTVREFLSEGDVAR----------ANWALGRHFYVT  190 (338)
T ss_dssp             --------------------TTT-TSEEEEECCCEETTEECSH-HHHHHHHHTTCHHH----------HHHHHTSCCEEE
T ss_pred             --------------------hcC-CeEEEEECcEecCCccccc-chHHHHHhcCcHHH----------HHHhcceeeEEE
Confidence                                456 9999999987655666654 56666666787764          999999999999


Q ss_pred             eeeeeccCCC-ccccCccccccCCCCccccCCCCCCeEEEEEEEEcc-----------CeEEEEEEEeCCCCcccCCcee
Q 017995          220 GPVVKGLGRG-SKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLST-----------RGVYKMVMSIGWNPYFDNAEKT  287 (362)
Q Consensus       220 g~v~~G~~~g-~~~lg~pTaNi~~~~~~~~lp~~~~GvY~~~~~~~~-----------~~~~~~~~~iG~~pt~~~~~~~  287 (362)
                      |+|+||+++| | +||||||||..+.. .++|.  .|||++|+.++.           +.+|+||+|||+||||++..++
T Consensus       191 G~Vv~G~~~Gsr-~lGfPTANl~~~~~-~~~P~--~GVYa~~v~~~~~~~~~~~~~~~~~~~~gv~niG~~PT~~~~~~~  266 (338)
T 2x0k_A          191 GPVVRGAGRGGK-ELGFPTANQYFHDT-VALPA--DGVYAGWLTILPTEAPVSGNMEPEVAYAAAISVGTNPTFGDEQRS  266 (338)
T ss_dssp             EECBCCSSCSSS-CTTSCSEEEEECTT-BCCCC--SEEEEEEEEECSCCSCCEESCCTTCEEEEEEEEEEETTTCTTEEE
T ss_pred             EEEecCcccccc-eecccccccCCccc-ccCCC--CeEEEEEEEECccccccccccCCCCEEEEEEEEcCCCccCCCcce
Confidence            9999999999 7 59999999987654 67774  899999999852           6899999999999999876778


Q ss_pred             EeEeeccCCCcccCCCeEEEEEeeecCCCCCCCCHHHHHHHHHHHHHHHHHHcCC--ccccCccCCCCcccc
Q 017995          288 IEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDL--PLYSKYRDDPYLKIT  357 (362)
Q Consensus       288 ~E~~~~~~f~~~~yg~~~~v~~~~~iR~e~~f~~~~~L~~qi~~d~~~~~~~~~~--~~~~~~~~~~~~~~~  357 (362)
                      ||||||| |++||||++|+|+|++|||+|+||+|+|+|++||++|++.||++|+.  +.|...+|+.|+.+.
T Consensus       267 vE~hild-f~~dlYg~~i~v~f~~~lR~e~kF~s~e~L~~qi~~D~~~ar~~l~~~~~~~~~~~~~~~~~~~  337 (338)
T 2x0k_A          267 VESFVLD-RDADLYGHDVKVEFVDHVRAMEKFDSVEQLLEVMAKDVQKTRTLLAQDVQAHKMAPETYFLQAE  337 (338)
T ss_dssp             EEEEETT-CCEECTTCEEEEEEEEEEECCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHSTTTSCSSEECCSC
T ss_pred             EEEEeec-CCcccCCCEEEEEEehhhCCccCCCCHHHHHHHHHHHHHHHHHHHhhcccccccChHHhhhhcc
Confidence            9999998 99999999999999999999999999999999999999999999964  446667777777543

>3op1_A Macrolide-efflux protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PEG; 2.49A {Streptococcus pneumoniae}

Probab=100.00  E-value=8.8e-51  Score=376.93  Aligned_cols=222  Identities=24%  Similarity=0.357  Sum_probs=176.4

Q ss_pred             CchHHHHHHHHHHCCCcEEEE--------cCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCC
Q 017995           72 LPGANRLIKHLSCHGVPMALA--------SNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME  143 (362)
Q Consensus        72 ~pgv~~~L~~L~~~g~~~~i~--------S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~  143 (362)
                      +-...+=++.|++.|+...++        +.++++|++.++ ..++.    +.+++|+|+++|+ ....+..+ +++   
T Consensus        78 Lt~~~eK~~ll~~lGVD~v~~~~F~~~~a~ls~e~Fv~~ll-~~l~~----~~ivvG~DfrFG~-r~G~~~~L-~~~---  147 (308)
T 3op1_A           78 ILNPAERERKLKREGVEELYLLDFSSQFASLTAQEFFATYI-KAMNA----KIIVAGFDYTFGS-DKKTAEDL-KNY---  147 (308)
T ss_dssp             SSCHHHHHHHHHHHTCCEEEEECCCHHHHTCCHHHHHHHHH-HHHTE----EEEEEETTCCBTT-TTBCSTTH-HHH---
T ss_pred             CCCHHHHHHHHHHcCCCEEEEecCCHHHHcCCHHHHHHHHH-HHcCC----CEEEECcCCCCCC-cCCCHHHH-HHh---
Confidence            334556677788888887765        578999999877 67765    8999999999998 54333222 111   


Q ss_pred             CCcEEEEecCHhhHHHHHHcCCEEEEEcCCCCccccccchhHhhcccccccccccCCCCCCccccCCCCCCceeEeeeee
Q 017995          144 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVV  223 (362)
Q Consensus       144 p~~~l~igDs~~d~~aA~~aG~~~i~v~~~~~~~~~~ssa~~vi~~l~el~~~~~~l~~~~~~~a~~lLgrp~~i~g~v~  223 (362)
                                      +  .+ .++.++....++..+|| +.+++.+.+++++.          |+.||||||+++|+|+
T Consensus       148 ----------------~--~~-~V~~v~~~~~~~~~ISS-T~IR~~L~~G~v~~----------A~~lLGrpy~i~G~Vv  197 (308)
T 3op1_A          148 ----------------F--DG-EVIIVPPVEDEKGKISS-TRIRQAILDGNVKE----------AGKLLGAPLPSRGMVV  197 (308)
T ss_dssp             ----------------C--SS-EEEEECCCBCSSCBCCH-HHHHHHHHHTCHHH----------HHHHHSSCCEEEEEEE
T ss_pred             ----------------C--CC-CEEEeCCEecCCceEeH-HHHHHHHHcCCHHH----------HHhhcCcceeEEEEEE
Confidence                            1  12 67788776656666654 56666666788774          9999999999999999


Q ss_pred             eccCCCccccCccccccCCCCccccCCCCCCeEEEEEEEEccCeEEEEEEEeCCCCcccCCceeEeEeeccCCCcccCCC
Q 017995          224 KGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDE  303 (362)
Q Consensus       224 ~G~~~g~~~lg~pTaNi~~~~~~~~lp~~~~GvY~~~~~~~~~~~~~~~~~iG~~pt~~~~~~~~E~~~~~~f~~~~yg~  303 (362)
                      ||+++|| +||||||||.+++. .++|.  .|||++||.++ +.+|+||+|||+||||++...++|||||| |++|+||+
T Consensus       198 ~G~~~Gr-~lGfPTANl~~~~~-~~~P~--~GVYa~~v~~~-~~~~~gv~niG~~PT~~~~~~~vE~hild-f~~dlYG~  271 (308)
T 3op1_A          198 HGNARGR-TIGYPTANLVLLDR-TYMPA--DGVYVVDVEIQ-RQKYRAMASVGKNVTFDGEEARFEVNIFD-FNQDIYGE  271 (308)
T ss_dssp             BCC-------CCCCEEEEECSS-BCCCC--SEEEEEEEEET-TEEEEEEEEECBTTTBC--CCEEEEEETT-CCCCCTTC
T ss_pred             ECCccCc-ccCCCcEeecCccc-ccCCC--CceEEEEEEEC-CEEEEEEEEeccCCccCCCceEEEEEEec-CCCccCCC
Confidence            9999998 59999999998765 67774  89999999985 68999999999999998767899999998 99999999


Q ss_pred             eEEEEEeeecCCCCCCCCHHHHHHHHHHHHHHHHHH
Q 017995          304 ELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERA  339 (362)
Q Consensus       304 ~~~v~~~~~iR~e~~f~~~~~L~~qi~~d~~~~~~~  339 (362)
                      +|+|+|++|||+|+||+|+|+|++||++|++.||++
T Consensus       272 ~i~v~f~~~lR~e~kF~s~e~L~~Qi~~D~~~ar~~  307 (308)
T 3op1_A          272 TVMVYWLDRIRDMTKFDSVDQLVDQLKADEEVTRNW  307 (308)
T ss_dssp             EEEEEEEEEEECCCCCSSHHHHHHHHHHHHHHHHHC
T ss_pred             EEEEEEHHhcCCCCCCCCHHHHHHHHHHHHHHHHhh
Confidence            999999999999999999999999999999999874

>1n08_A Putative riboflavin kinase; phophoryl transferases, flavin cofactors, metal binding; HET: ADP; 1.60A {Schizosaccharomyces pombe} SCOP: b.43.5.1 PDB: 1n05_A* 1n07_A* 1n06_A*

Probab=100.00  E-value=1.6e-49  Score=333.86  Aligned_cols=143  Identities=46%  Similarity=0.849  Sum_probs=130.3

Q ss_pred             CCCCCceeEeeeeeeccCCCccccCccccccCCCC--ccccCCCCCCeEEEEEEEEccCeEEEEEEEeCCCCcccCCcee
Q 017995          210 TLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEG--YSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKT  287 (362)
Q Consensus       210 ~lLgrp~~i~g~v~~G~~~g~~~lg~pTaNi~~~~--~~~~lp~~~~GvY~~~~~~~~~~~~~~~~~iG~~pt~~~~~~~  287 (362)
                      .++||||+++|+|+||+++||++||||||||.++.  ...++|  +.|||++|+.++ +.+|+||+|||+||||++...+
T Consensus        18 ~~~Grpy~i~G~Vv~G~~rGrr~LGfPTANl~~~~~~~~~~~p--~~GVYa~~v~~~-~~~~~gv~nIG~~PTf~~~~~~   94 (163)
T 1n08_A           18 VQSPYPIRFEGKVVHGFGRGSKELGIPTANISEDAIQELLRYR--DSGVYFGYAMVQ-KRVFPMVMSVGWNPYYKNKLRS   94 (163)
T ss_dssp             CCTTCCEEEEEEEECCSSSCGGGGTCCCEEECGGGTTTTTTTS--CSEEEEEEEEET-TEEEEEEEEEEECTTCSSCCEE
T ss_pred             CCCCCCEEEEEEEEeCCccCCCccCcCCCcccCcccccccCCC--CCEEEEEEEEEC-CEEEEEEEEeCCCCeECCCceE
Confidence            67899999999999999999667999999998752  212445  489999999985 4889999999999999876788


Q ss_pred             EeEeeccCCCcccCCCeEEEEEeeecCCCCCCCCHHHHHHHHHHHHHHHHHHcCCccccCccCCCCcc
Q 017995          288 IEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYLK  355 (362)
Q Consensus       288 ~E~~~~~~f~~~~yg~~~~v~~~~~iR~e~~f~~~~~L~~qi~~d~~~~~~~~~~~~~~~~~~~~~~~  355 (362)
                      ||||||+||++||||++|+|+|++|||+|+||+|+|+|++||++|++.||++|+.+.|++|++|+||.
T Consensus        95 vEvhil~df~~dlYG~~i~V~f~~~lR~E~kF~sle~L~~qI~~D~~~ar~~l~~~~~~~~~~~~~~~  162 (163)
T 1n08_A           95 AEVHLIERQGEDFYEEIMRVIVLGYIRPELNYAGLDKLIEDIHTDIRVALNSMDRPSYSSYKKDPFFK  162 (163)
T ss_dssp             EEEEETTCCSCCCTTCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHTSHHHHGGGGCGGGC
T ss_pred             EEEEEecCCCCccCCCEEEEEEHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhccchhhcccchhhc
Confidence            99999944999999999999999999999999999999999999999999999999999999999994

>1nb0_A Hypothetical protein FLJ11149; beta barrel, transferase; HET: ADP; 1.70A {Homo sapiens} SCOP: b.43.5.1 PDB: 1nb9_A* 1p4m_A* 1q9s_A*

Probab=100.00  E-value=5.7e-50  Score=331.76  Aligned_cols=142  Identities=49%  Similarity=0.936  Sum_probs=129.1

Q ss_pred             CCceeEeeeeeeccCCCccccCccccccCCCCccccCCC-CCCeEEEEEEEEccCeEEEEEEEeCCCCcccCCceeEeEe
Q 017995          213 SEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSE-HPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPW  291 (362)
Q Consensus       213 grp~~i~g~v~~G~~~g~~~lg~pTaNi~~~~~~~~lp~-~~~GvY~~~~~~~~~~~~~~~~~iG~~pt~~~~~~~~E~~  291 (362)
                      .|||+++|+|+||+++||++||||||||.++.. .++|. ++.|||++|+.+.++.+|+||+|||+||||++...+||||
T Consensus         2 ~~py~i~G~Vv~G~~rGrr~LGfPTANl~~~~~-~~~P~~~~~GVYa~~v~~~~~~~~~gv~nIG~~PT~~~~~~~vEvh   80 (147)
T 1nb0_A            2 HLPYFCRGQVVRGFGRGSKQLGIPTANFPEQVV-DNLPADISTGIYYGWASVGSGDVHKMVVSIGWNPYYKNTKKSMETH   80 (147)
T ss_dssp             CCSEEEEEECBCCSSSCGGGGTCCCEECCHHHH-HTSCTTCCSEEEEEEEEETTCCCEEEEEEEEECSSSSSSCEEEEEE
T ss_pred             CccEEEEEEEEeCCccCccccCCccEEEEcccc-ccCCCCCCCEEEEEEEEECCCCEEEEEEEecCCCeECCCceEEEEE
Confidence            489999999999999996679999999987443 56662 2489999999986567899999999999998767789999


Q ss_pred             eccCCCcccCCCeEEEEEeeecCCCCCCCCHHHHHHHHHHHHHHHHHHcCCccccCccCCCCcc
Q 017995          292 LLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYLK  355 (362)
Q Consensus       292 ~~~~f~~~~yg~~~~v~~~~~iR~e~~f~~~~~L~~qi~~d~~~~~~~~~~~~~~~~~~~~~~~  355 (362)
                      ||+||++||||++|+|+|++|||+|+||+|+|+|++||++|++.||++|+.+.|+.|++|+||.
T Consensus        81 il~df~~dlYG~~i~v~f~~~lR~E~kF~sle~L~~qI~~D~~~ar~~l~~~~~~~~~~~~~~~  144 (147)
T 1nb0_A           81 IMHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDIEEAKKRLELPEYLKIKEDNFFQ  144 (147)
T ss_dssp             ESSCCSSCCTTSEEEEEEEEEEECCCCCSSHHHHHHHHHHHHHHHHHHTTSHHHHGGGGCHHHH
T ss_pred             EecCCCCccCCCEEEEEEehhccCCcCCCCHHHHHHHHHHHHHHHHHHHhCcchhhcccchhhc
Confidence            9944999999999999999999999999999999999999999999999999999999999996

>1mrz_A Riboflavin kinase/FMN adenylyltransferase; rossmann fold, flavin binding domain, 6-stranded beta barrel nucleotide binding domain; HET: CIT; 1.90A {Thermotoga maritima} SCOP: b.43.5.1 c.26.1.3 PDB: 1s4m_A* 1t6x_A* 1t6y_A* 1t6z_A* 2i1l_A

Probab=100.00  E-value=1.2e-48  Score=362.04  Aligned_cols=219  Identities=26%  Similarity=0.331  Sum_probs=158.0

Q ss_pred             hHHHHHHHHHHCCCcEEEEc------CCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 017995           74 GANRLIKHLSCHGVPMALAS------NSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS  147 (362)
Q Consensus        74 gv~~~L~~L~~~g~~~~i~S------~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~  147 (362)
                      ...+=++.|++.| .+.++.      .++++|++.++   ++.    +.++.|+|+++|+.....+..+           
T Consensus        55 ~~~eR~~ll~~lg-~~~v~~F~~~a~ls~~~Fi~~il---l~~----~~iVvG~Df~fG~~~~g~~~~L-----------  115 (293)
T 1mrz_A           55 TVESRVEMLSRYA-RTVVLDFFRIKDLTPEGFVERYL---SGV----SAVVVGRDFRFGKNASGNASFL-----------  115 (293)
T ss_dssp             CHHHHHHHHTTTS-CEEEECHHHHTTCCHHHHHHHHC---TTC----CEEEEETTCCBSGGGCBCHHHH-----------
T ss_pred             CHHHHHHHHHhCC-CEEEEEhHHhhcCCHHHHHHHHh---cCC----CEEEECCCCCCCCCCCCCHHHH-----------
Confidence            3445557777777 555543      67888887655   343    8999999999986532222211           


Q ss_pred             EEEecCHhhHHHHHHcCCEEEEEcCCCCccccccchhHhhcccccccccccCCCCCCccccCCCCCCceeEeeeeeeccC
Q 017995          148 LVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLG  227 (362)
Q Consensus       148 l~igDs~~d~~aA~~aG~~~i~v~~~~~~~~~~ssa~~vi~~l~el~~~~~~l~~~~~~~a~~lLgrp~~i~g~v~~G~~  227 (362)
                                   ++.|+.++.++....++..+|| +.+++.+.+++++.          |+.||||||+++|+|+||++
T Consensus       116 -------------~~~G~~V~~v~~~~~~~~~iSS-T~IR~~L~~G~i~~----------a~~lLGr~y~i~G~Vv~G~~  171 (293)
T 1mrz_A          116 -------------RKKGVEVYEIEDVVVQGKRVSS-SLIRNLVQEGRVEE----------IPAYLGRYFEIEGIVHKDRE  171 (293)
T ss_dssp             -------------HHTTCEEEEECCCEETTEECCH-HHHHHHHHTTCTTT----------THHHHSSCCEEEEEC-----
T ss_pred             -------------HhCCCEEEEECCEEeCCccccH-hHHHHHHhcCcHHH----------HhhhcCCCeEEEEEEccCcc
Confidence                         1279999999886555556654 56666666787664          99999999999999999999


Q ss_pred             CCccccCccccccCCC-CccccCCCCCCeEEEEEEEEccCeEEEEEEEeCCCCcccCC-ceeEeEeeccCCCcccCCCeE
Q 017995          228 RGSKVLGIPTANLSTE-GYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNA-EKTIEPWLLHEFDEDFYDEEL  305 (362)
Q Consensus       228 ~g~~~lg~pTaNi~~~-~~~~~lp~~~~GvY~~~~~~~~~~~~~~~~~iG~~pt~~~~-~~~~E~~~~~~f~~~~yg~~~  305 (362)
                      +||+ ||||||||.++ .. .++|.  .|||++|+.+.++.+|+||+|||+||||++. ..++|||||| |++|+||+++
T Consensus       172 ~Gr~-lGfPTaNl~~~~~~-~~~P~--~GVYa~~v~~~~~~~~~gv~niG~~PT~~~~~~~~iE~hild-f~~dlYg~~i  246 (293)
T 1mrz_A          172 FGRK-LGFPTANIDRGNEK-LVDLK--RGVYLVRVHLPDGKKKFGVMNVGFRPTVGDARNVKYEVYILD-FEGDLYGQRL  246 (293)
T ss_dssp             -------CCCEECBCCSSC-BCCCC--SEEEEEEEECGGGCEEEEEEEEEEC------CCEEEEEEETT-CCSCCTTCEE
T ss_pred             ccce-ecccceEeccCccC-cCCCC--CeEEEEEEEEecCcEEEEEEEeccCcccCCCccceEEEEecc-CCcccCCCEE
Confidence            9985 99999999876 43 67774  8999999987235789999999999999864 5789999998 9999999999


Q ss_pred             EEEEeeecCCCCCCCCHHHHHHHHHHHHHHHHHHc
Q 017995          306 HLVIVGYIRPEANFPSLETLIAKIHEDRKVAERAL  340 (362)
Q Consensus       306 ~v~~~~~iR~e~~f~~~~~L~~qi~~d~~~~~~~~  340 (362)
                      +|+|++|||+|+||+|+|+|++||++|++.||++|
T Consensus       247 ~v~f~~~lR~e~kF~s~~~L~~qi~~D~~~a~~~l  281 (293)
T 1mrz_A          247 KLEVLKFMRDEKKFDSIEELKAAIDQDVKSARNMI  281 (293)
T ss_dssp             EEEEEEEEECCCC----CCHHHHHHHHHHHHHHHH
T ss_pred             EEEEHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999998

>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}

Probab=99.93  E-value=1.2e-24  Score=192.55  Aligned_cols=173  Identities=26%  Similarity=0.410  Sum_probs=155.5

Q ss_pred             CHHHHHHHHHHHHHHcCCCCCHHHHHhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhh-cCCCCCchHHHHHH
Q 017995            2 TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHL-CKVKALPGANRLIK   80 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~pgv~~~L~   80 (362)
                      |++.+.++++++++++|.+.+.+..+.+.|.+..+.+.............+.+...+.+.+.... ...+++||+.++|+
T Consensus        15 s~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~   94 (216)
T 3kbb_A           15 TEPLYFEAYRRVAESYGKPYTEDLHRRIMGVPEREGLPILMEALEIKDSLENFKKRVHEEKKRVFSELLKENPGVREALE   94 (216)
T ss_dssp             CGGGHHHHHHHHHHHTTCCCCHHHHHHHTTSCHHHHHHHHHHHTTCCSCHHHHHHHHHHHHHHHHHHHCCBCTTHHHHHH
T ss_pred             CHHHHHHHHHHHHHHcCCCCCHHHHHHHhccchhhhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHhcccCccHHHHHH
Confidence            56788999999999999999999999999999999988888888777777777766666665544 46789999999999


Q ss_pred             HHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHH
Q 017995           81 HLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAG  160 (362)
Q Consensus        81 ~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA  160 (362)
                      .|+++|++++++||++...+...+ +.+|+.++|+.++++++++.+||+|++|..+++++|++|++|+||||+.+|+++|
T Consensus        95 ~L~~~g~~~~i~tn~~~~~~~~~l-~~~~l~~~fd~~~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l~VgDs~~Di~aA  173 (216)
T 3kbb_A           95 FVKSKRIKLALATSTPQREALERL-RRLDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNVVPEKVVVFEDSKSGVEAA  173 (216)
T ss_dssp             HHHHTTCEEEEECSSCHHHHHHHH-HHTTCGGGCSEEECGGGSSSCTTSTHHHHHHHHHHTCCGGGEEEEECSHHHHHHH
T ss_pred             HHHHcCCCcccccCCcHHHHHHHH-HhcCCCccccccccccccCCCcccHHHHHHHHHhhCCCccceEEEecCHHHHHHH
Confidence            999999999999999999999888 8999999999999999999999999999999999999999999999999999999


Q ss_pred             HHcCCEEEE-EcCCCC
Q 017995          161 KAAGMEVVA-VPSLPK  175 (362)
Q Consensus       161 ~~aG~~~i~-v~~~~~  175 (362)
                      +++||++|+ +.++..
T Consensus       174 ~~aG~~~i~~v~~g~~  189 (216)
T 3kbb_A          174 KSAGIERIYGVVHSLN  189 (216)
T ss_dssp             HHTTCCCEEEECCSSS
T ss_pred             HHcCCcEEEEecCCCC
Confidence            999999885 666543

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}

Probab=99.92  E-value=1.3e-24  Score=196.98  Aligned_cols=171  Identities=23%  Similarity=0.323  Sum_probs=144.3

Q ss_pred             CHHHHHHHHHHHHHHcCCCCCHHHHHhhcCCCHHHHHHHHHHHhCCCCC--HHH---HHHHHHHHHHhhh---cCCCCCc
Q 017995            2 TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA--KHE---FVNEVYSMFSDHL---CKVKALP   73 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~~---~~~~~~p   73 (362)
                      |++++.+||+++++++|++++.+....+.|.+..+.++.+....+...+  ..+   +.......+....   ....++|
T Consensus        19 s~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p   98 (243)
T 4g9b_A           19 TAHLHFQAWQQIAAEIGISIDAQFNESLKGISRDESLRRILQHGGKEGDFNSQERAQLAYRKNLLYVHSLRELTVNAVLP   98 (243)
T ss_dssp             CHHHHHHHHHHHHHHTTCCCCTTGGGGGTTCCHHHHHHHHHHHTTCGGGCCHHHHHHHHHHHHHHHHHHHHTCCGGGBCT
T ss_pred             CHHHHHHHHHHHHHHcCCCCCHHHHHHHcCCCHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccccc
Confidence            6789999999999999999998888899999999999998887765422  221   2222222333222   2356899


Q ss_pred             hHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecC
Q 017995           74 GANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDS  153 (362)
Q Consensus        74 gv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs  153 (362)
                      |+.++|+.|+++|++++++|++...  ...| +++|+.++|+.|+++++++.+||+|++|+.+++++|++|++|+||||+
T Consensus        99 g~~~ll~~L~~~g~~i~i~t~~~~~--~~~l-~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l~VgDs  175 (243)
T 4g9b_A           99 GIRSLLADLRAQQISVGLASVSLNA--PTIL-AALELREFFTFCADASQLKNSKPDPEIFLAACAGLGVPPQACIGIEDA  175 (243)
T ss_dssp             THHHHHHHHHHTTCEEEECCCCTTH--HHHH-HHTTCGGGCSEECCGGGCSSCTTSTHHHHHHHHHHTSCGGGEEEEESS
T ss_pred             cHHHHHHhhhcccccceecccccch--hhhh-hhhhhccccccccccccccCCCCcHHHHHHHHHHcCCChHHEEEEcCC
Confidence            9999999999999999999998653  5567 889999999999999999999999999999999999999999999999


Q ss_pred             HhhHHHHHHcCCEEEEEcCCCC
Q 017995          154 VIGVVAGKAAGMEVVAVPSLPK  175 (362)
Q Consensus       154 ~~d~~aA~~aG~~~i~v~~~~~  175 (362)
                      .+|+++|+++||++|+|.++..
T Consensus       176 ~~di~aA~~aG~~~I~V~~g~~  197 (243)
T 4g9b_A          176 QAGIDAINASGMRSVGIGAGLT  197 (243)
T ss_dssp             HHHHHHHHHHTCEEEEESTTCC
T ss_pred             HHHHHHHHHcCCEEEEECCCCC
Confidence            9999999999999999998654

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}

Probab=99.91  E-value=4.9e-23  Score=186.16  Aligned_cols=199  Identities=41%  Similarity=0.606  Sum_probs=173.4

Q ss_pred             HHHHHHHHHHHHHHcCCCCCHHHHHhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhcCCCCCchHHHHHHHH
Q 017995            3 DGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHL   82 (362)
Q Consensus         3 e~~~~~a~~~~l~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~~~L~~L   82 (362)
                      +..+..++.++++++|++.+.+....+.|.+..+.++.+...++.+.+.+++...+.+.+........++||+.++|+.|
T Consensus        45 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  124 (250)
T 3l5k_A           45 ERLYSVVFQEICNRYDKKYSWDVKSLVMGKKALEAAQIIIDVLQLPMSKEELVEESQTKLKEVFPTAALMPGAEKLIIHL  124 (250)
T ss_dssp             HHHHHHHHHHHHHHTTCCCCHHHHHHHTTCCHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHHGGGCCBCTTHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCCHHHHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHH
Confidence            56678899999999999999888899999999999999999999887888888888888877777889999999999999


Q ss_pred             HHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCC--CCCCCCCCHHHHHHHHHHcCCCC--CcEEEEecCHhhHH
Q 017995           83 SCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD--EVRTGKPSPDIFLEAAKRLNMEP--SSSLVIEDSVIGVV  158 (362)
Q Consensus        83 ~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~--d~~~gKp~p~~~~~~~~~~~~~p--~~~l~igDs~~d~~  158 (362)
                      +++|++++++||++...+...+.+.+++..+|+.+++++  ++..+||+|+.|..+++++|++|  ++|++|||+.+|+.
T Consensus       125 ~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~  204 (250)
T 3l5k_A          125 RKHGIPFALATSSRSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACAKRFSPPPAMEKCLVFEDAPNGVE  204 (250)
T ss_dssp             HHTTCCEEEECSCCHHHHHHHTTTCHHHHTTSSCEECTTCTTCCSCTTSTHHHHHHHHTSSSCCCGGGEEEEESSHHHHH
T ss_pred             HhCCCcEEEEeCCCHHHHHHHHHhccCHHhheeeEEecchhhccCCCCChHHHHHHHHHcCCCCCcceEEEEeCCHHHHH
Confidence            999999999999998887777733458889999999999  89999999999999999999998  99999999999999


Q ss_pred             HHHHcCCEEEEEcCCCCccccccchhHhhcccccccccccCCC
Q 017995          159 AGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLP  201 (362)
Q Consensus       159 aA~~aG~~~i~v~~~~~~~~~~ssa~~vi~~l~el~~~~~~l~  201 (362)
                      +|+++|+.+++|..+.........++.++.++.++.....+++
T Consensus       205 ~a~~aG~~~i~v~~~~~~~~~~~~ad~v~~sl~el~~~l~~l~  247 (250)
T 3l5k_A          205 AALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQDFQPELFGLP  247 (250)
T ss_dssp             HHHHTTCEEEECCCTTSCGGGSTTSSEECSCGGGCCGGGGTCC
T ss_pred             HHHHcCCEEEEEcCCCCchhhcccccEeecCHHHhhHHHhcCC
Confidence            9999999999998865443344467889999998765544443

>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}

Probab=99.91  E-value=3.1e-23  Score=188.46  Aligned_cols=186  Identities=23%  Similarity=0.335  Sum_probs=152.8

Q ss_pred             CHHHHHHHHHHHHHHcCCCCCHHHHHhhcCCCHHHHHHHHHHHhCCCCC--H---HHHHHHHHHHHHhhh---cCCCCCc
Q 017995            2 TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA--K---HEFVNEVYSMFSDHL---CKVKALP   73 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~---~~~~~~p   73 (362)
                      |++.+.+||+++++++|++++.+....+.|.+..+.+..+.........  .   ..+.+.....+....   ....++|
T Consensus        40 s~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  119 (250)
T 4gib_A           40 TAYYHYMAWRKLAHKVGIDIDTKFNESLKGISRMESLDRILEFGNKKYSFSEEEKVRMAEEKNNYYVSLIDEITSNDILP  119 (250)
T ss_dssp             CHHHHHHHHHHHHHTTTCCCCTTGGGGTTTCCHHHHHHHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHTTCCGGGSCT
T ss_pred             CHHHHHHHHHHHHHHcCCCCCHHHHHHHhCcchHHHHHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhhccccccch
Confidence            6788999999999999999988888889999998888888776554322  2   223334444444443   3467899


Q ss_pred             hHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecC
Q 017995           74 GANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDS  153 (362)
Q Consensus        74 gv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs  153 (362)
                      |+.++|+.|+++|++++++|++..  +...| +++|+.++|+.|+++++++.+||+|++|..+++++|++|++|+||||+
T Consensus       120 ~~~~ll~~Lk~~g~~i~i~~~~~~--~~~~L-~~~gl~~~Fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l~VGDs  196 (250)
T 4gib_A          120 GIESLLIDVKSNNIKIGLSSASKN--AINVL-NHLGISDKFDFIADAGKCKNNKPHPEIFLMSAKGLNVNPQNCIGIEDA  196 (250)
T ss_dssp             THHHHHHHHHHTTCEEEECCSCTT--HHHHH-HHHTCGGGCSEECCGGGCCSCTTSSHHHHHHHHHHTCCGGGEEEEESS
T ss_pred             hHHHHHHHHHhcccccccccccch--hhhHh-hhcccccccceeecccccCCCCCcHHHHHHHHHHhCCChHHeEEECCC
Confidence            999999999999999998877654  34567 889999999999999999999999999999999999999999999999


Q ss_pred             HhhHHHHHHcCCEEEEEcCCCCccccccchhHhhccccccc
Q 017995          154 VIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLR  194 (362)
Q Consensus       154 ~~d~~aA~~aG~~~i~v~~~~~~~~~~ssa~~vi~~l~el~  194 (362)
                      ..|+++|+++|+.+|+|....    ..+.++.+++++.++.
T Consensus       197 ~~Di~aA~~aG~~~i~v~~~~----~~~~ad~vi~~l~eL~  233 (250)
T 4gib_A          197 SAGIDAINSANMFSVGVGNYE----NLKKANLVVDSTNQLK  233 (250)
T ss_dssp             HHHHHHHHHTTCEEEEESCTT----TTTTSSEEESSGGGCC
T ss_pred             HHHHHHHHHcCCEEEEECChh----HhccCCEEECChHhCC
Confidence            999999999999999996522    2235678888888764

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.89  E-value=1.3e-22  Score=179.27  Aligned_cols=184  Identities=14%  Similarity=0.197  Sum_probs=145.7

Q ss_pred             CHHHHHHHHHHHHHHcCCCC-CHHHHHhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhh-hcCCCCCchHHHHH
Q 017995            2 TDGMFSEVLKTFLVKYGKEW-DGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH-LCKVKALPGANRLI   79 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~pgv~~~L   79 (362)
                      |+..+.++++++++++|.+. +.+.+..+.|.+..+.+..+   .+. ...+++.+.+.+.+... .....++||+.++|
T Consensus        18 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l   93 (210)
T 2ah5_A           18 SSIGIHNAFTYTFKELGVPSPDAKTIRGFMGPPLESSFATC---LSK-DQISEAVQIYRSYYKAKGIYEAQLFPQIIDLL   93 (210)
T ss_dssp             CHHHHHHHHHHHHHHHTCCCCCHHHHHHTSSSCHHHHHHTT---SCG-GGHHHHHHHHHHHHHHTGGGSCEECTTHHHHH
T ss_pred             CHHHHHHHHHHHHHHcCCCCCCHHHHHHHcCccHHHHHHHH---cCH-HHHHHHHHHHHHHHHHhccCCCCCCCCHHHHH
Confidence            56778899999999999876 45667788888776554333   121 12345556666655543 34578999999999


Q ss_pred             HHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHH
Q 017995           80 KHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA  159 (362)
Q Consensus        80 ~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~a  159 (362)
                      +.|++ |++++++||++...++..+ +++|+.++|+.+++++  ..+||+|++|+.+++++|++|++|++|||+.+|+++
T Consensus        94 ~~L~~-~~~l~i~T~~~~~~~~~~l-~~~gl~~~f~~i~~~~--~~~Kp~p~~~~~~~~~lg~~p~~~~~vgDs~~Di~~  169 (210)
T 2ah5_A           94 EELSS-SYPLYITTTKDTSTAQDMA-KNLEIHHFFDGIYGSS--PEAPHKADVIHQALQTHQLAPEQAIIIGDTKFDMLG  169 (210)
T ss_dssp             HHHHT-TSCEEEEEEEEHHHHHHHH-HHTTCGGGCSEEEEEC--SSCCSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHH
T ss_pred             HHHHc-CCeEEEEeCCCHHHHHHHH-HhcCchhheeeeecCC--CCCCCChHHHHHHHHHcCCCcccEEEECCCHHHHHH
Confidence            99999 9999999999999888888 8899999999999887  788999999999999999999999999999999999


Q ss_pred             HHHcCCEEEEEcCCCCcccc--ccchhHhhcccccc
Q 017995          160 GKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDL  193 (362)
Q Consensus       160 A~~aG~~~i~v~~~~~~~~~--~ssa~~vi~~l~el  193 (362)
                      |+++|+.++++.++......  ...++.+++++.++
T Consensus       170 a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~~~~el  205 (210)
T 2ah5_A          170 ARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEV  205 (210)
T ss_dssp             HHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHH
T ss_pred             HHHCCCcEEEEcCCCCCHHHHHhCCCCEEECCHHHH
Confidence            99999999999875432211  12345666666553

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}

Probab=99.89  E-value=2.2e-22  Score=181.23  Aligned_cols=189  Identities=19%  Similarity=0.246  Sum_probs=150.5

Q ss_pred             CHHHHHHHHHHHHHHcCCC--CCHHHHHhhcCCCHHHHHHHHHHHh------------------CCCCCH---HHHHHHH
Q 017995            2 TDGMFSEVLKTFLVKYGKE--WDGREKHKIVGKTPLEEAAIIVEDY------------------GLPCAK---HEFVNEV   58 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~--~~~~~~~~~~g~~~~~~~~~~~~~~------------------~~~~~~---~~~~~~~   58 (362)
                      |+..+.++++++++.+|++  .+.+.+..+.|.+....++.+....                  +...+.   +++.+.+
T Consensus        18 s~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   97 (240)
T 2hi0_A           18 TSADLTSALNYAFEQTGHRHDFTVEDIKNFFGSGVVVAVTRALAYEAGSSRESLVAFGTKDEQIPEAVTQTEVNRVLEVF   97 (240)
T ss_dssp             CHHHHHHHHHHHHHHTTSCCCCCHHHHHHHCSSCHHHHHHHHHHHHTTCCHHHHTTTTSTTCCCCTTCCHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHcCCCCCCCHHHHHHhcCccHHHHHHHHHHhcccccccccccccccccccCCCCCHHHHHHHHHHH
Confidence            5678899999999999987  6777888899998877776665211                  111222   2334445


Q ss_pred             HHHHHhhh-cCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHH
Q 017995           59 YSMFSDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAA  137 (362)
Q Consensus        59 ~~~~~~~~-~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~  137 (362)
                      .+.|.... ...+++||+.++|+.|+++|++++++||++...++..+ +.+++. +|+.+++++++..+||+|+.|..++
T Consensus        98 ~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~~~l~-~f~~~~~~~~~~~~Kp~p~~~~~~~  175 (240)
T 2hi0_A           98 KPYYADHCQIKTGPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLV-EELFPG-SFDFALGEKSGIRRKPAPDMTSECV  175 (240)
T ss_dssp             HHHHHHTSSSSCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HHHSTT-TCSEEEEECTTSCCTTSSHHHHHHH
T ss_pred             HHHHHHhhhhcCCcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-HHcCCc-ceeEEEecCCCCCCCCCHHHHHHHH
Confidence            55555433 46789999999999999999999999999999888888 888998 9999999999999999999999999


Q ss_pred             HHcCCCCCcEEEEecCHhhHHHHHHcCCEEEEEcCCCCccccc--cchhHhhccccc
Q 017995          138 KRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRY--TAADEVINSLLD  192 (362)
Q Consensus       138 ~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~~~~~~~~~~--ssa~~vi~~l~e  192 (362)
                      +++|++|++|++|||+.+|+.+|+++|+.+++|..+.......  ..++.++.++.+
T Consensus       176 ~~l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~~~~~e  232 (240)
T 2hi0_A          176 KVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIVDTAEK  232 (240)
T ss_dssp             HHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEECSHHH
T ss_pred             HHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEECCHHH
Confidence            9999999999999999999999999999999998754221111  134556666555

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}

Probab=99.88  E-value=5.5e-22  Score=173.29  Aligned_cols=190  Identities=25%  Similarity=0.354  Sum_probs=164.4

Q ss_pred             CHHHHHHHHHHHHHHcCCCCCHHHHHhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhc--CCCCCchHHHHH
Q 017995            2 TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLC--KVKALPGANRLI   79 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~pgv~~~L   79 (362)
                      +...+.+++.++++++|.+.+.+.+....|.+..+.++.+....+.....+++...+...+.....  ...++||+.++|
T Consensus        19 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   98 (214)
T 3e58_A           19 TEKYYYDRRASFLGQKGISIDHLPPSFFIGGNTKQVWENILRDEYDKWDVSTLQEEYNTYKQNNPLPYKELIFPDVLKVL   98 (214)
T ss_dssp             CHHHHHHHHHHHHHHTTCCCTTSCHHHHTTSCGGGCHHHHHGGGGGGSCHHHHHHHHHHHHHHSCCCHHHHBCTTHHHHH
T ss_pred             cHHHHHHHHHHHHHHcCCCCCHHHHHHHcCCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHhhcccCCCcCchHHHHH
Confidence            456788999999999999888888888999998888888888777666777777777776665542  357999999999


Q ss_pred             HHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHH
Q 017995           80 KHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA  159 (362)
Q Consensus        80 ~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~a  159 (362)
                      +.|+++|++++++|+++...++..+ +.+++.++|+.+++++++..+||+|+.|..+++++|++|++|++|||+.+|+.+
T Consensus        99 ~~l~~~g~~~~i~s~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~  177 (214)
T 3e58_A           99 NEVKSQGLEIGLASSSVKADIFRAL-EENRLQGFFDIVLSGEEFKESKPNPEIYLTALKQLNVQASRALIIEDSEKGIAA  177 (214)
T ss_dssp             HHHHHTTCEEEEEESSCHHHHHHHH-HHTTCGGGCSEEEEGGGCSSCTTSSHHHHHHHHHHTCCGGGEEEEECSHHHHHH
T ss_pred             HHHHHCCCCEEEEeCCcHHHHHHHH-HHcCcHhheeeEeecccccCCCCChHHHHHHHHHcCCChHHeEEEeccHhhHHH
Confidence            9999999999999999999999888 889999999999999999999999999999999999999999999999999999


Q ss_pred             HHHcCCEEEEEcCCCCccccccchhHhhcccccc
Q 017995          160 GKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL  193 (362)
Q Consensus       160 A~~aG~~~i~v~~~~~~~~~~ssa~~vi~~l~el  193 (362)
                      |+++|+.++++......... ..++.++.++.++
T Consensus       178 a~~aG~~~~~~~~~~~~~~~-~~a~~~~~~~~el  210 (214)
T 3e58_A          178 GVAADVEVWAIRDNEFGMDQ-SAAKGLLDSLTDV  210 (214)
T ss_dssp             HHHTTCEEEEECCSSSCCCC-TTSSEEESSGGGG
T ss_pred             HHHCCCEEEEECCCCccchh-ccHHHHHHHHHHH
Confidence            99999999999874322222 3567888888775

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A

Probab=99.87  E-value=1.7e-21  Score=173.51  Aligned_cols=186  Identities=21%  Similarity=0.254  Sum_probs=153.8

Q ss_pred             CHHHHHHHHHHHHHHcCCC-CCHHHHHhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhh-cCCCCCchHHHHH
Q 017995            2 TDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHL-CKVKALPGANRLI   79 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~pgv~~~L   79 (362)
                      |+..+..++.++++.+|.+ .+.+.+....|.+..+.++.+...    ...+++...+.+.+.... ...+++||+.++|
T Consensus        17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   92 (222)
T 2nyv_A           17 SAKDIALALEKTLKELGLEEYYPDNVTKYIGGGVRALLEKVLKD----KFREEYVEVFRKHYLENPVVYTKPYPEIPYTL   92 (222)
T ss_dssp             CHHHHHHHHHHHHHHTTCGGGCCSCGGGGCSSCHHHHHHHHHGG----GCCTHHHHHHHHHHHHCSCSSCEECTTHHHHH
T ss_pred             CHHHHHHHHHHHHHHcCCCCCCHHHHHHHhCcCHHHHHHHHhCh----HHHHHHHHHHHHHHHHhccccCccCCCHHHHH
Confidence            4667888999999999987 566677788898888877766531    122455566666665543 5788999999999


Q ss_pred             HHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHH
Q 017995           80 KHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA  159 (362)
Q Consensus        80 ~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~a  159 (362)
                      +.|+++|++++++||++...++..+ +.+|+.++|+.+++++++..+||+|+.|..+++++|++|++|++|||+.+|+.+
T Consensus        93 ~~l~~~g~~~~i~s~~~~~~~~~~l-~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~  171 (222)
T 2nyv_A           93 EALKSKGFKLAVVSNKLEELSKKIL-DILNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEPEKALIVGDTDADIEA  171 (222)
T ss_dssp             HHHHHTTCEEEEECSSCHHHHHHHH-HHTTCGGGCSEEECTTSSCTTCCTTHHHHHHHHHHTCCGGGEEEEESSHHHHHH
T ss_pred             HHHHHCCCeEEEEcCCCHHHHHHHH-HHcCCHHHheEEEecCcCCCCCCChHHHHHHHHHhCCCchhEEEECCCHHHHHH
Confidence            9999999999999999999998888 889999999999999999999999999999999999999999999999999999


Q ss_pred             HHHcCCEEEEEcCCCCccccccchhHhhcccccc
Q 017995          160 GKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL  193 (362)
Q Consensus       160 A~~aG~~~i~v~~~~~~~~~~ssa~~vi~~l~el  193 (362)
                      |+++|+.+++|.++...... ..++.++.++.++
T Consensus       172 a~~aG~~~i~v~~g~~~~~~-~~~~~~~~~~~el  204 (222)
T 2nyv_A          172 GKRAGTKTALALWGYVKLNS-QIPDFTLSRPSDL  204 (222)
T ss_dssp             HHHHTCEEEEETTSSCSCCC-CCCSEEESSTTHH
T ss_pred             HHHCCCeEEEEcCCCCCccc-cCCCEEECCHHHH
Confidence            99999999999875322222 3456677776664

>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A

Probab=99.87  E-value=1.8e-21  Score=173.94  Aligned_cols=191  Identities=25%  Similarity=0.301  Sum_probs=157.8

Q ss_pred             CHHHHHHHHHHHHHHcCCCCCHHHHHhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhh---cCCCCCchHHHH
Q 017995            2 TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHL---CKVKALPGANRL   78 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~pgv~~~   78 (362)
                      ++..+.+++.++++++|...+.+.+....|.+..+.++.+............+...+...+.+..   ....++||+.++
T Consensus        33 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  112 (237)
T 4ex6_A           33 TPAAIATITAEVLAAMGTAVSRGAILSTVGRPLPASLAGLLGVPVEDPRVAEATEEYGRRFGAHVRAAGPRLLYPGVLEG  112 (237)
T ss_dssp             CHHHHHHHHHHHHHHTTCCCCHHHHHHHTTSCHHHHHHHHHTSCTTSHHHHHHHHHHHHHHHHHHHHHGGGGBCTTHHHH
T ss_pred             CHHHHHHHHHHHHHHcCCCCCHHHHHHhcCccHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcccccCCccCCCHHHH
Confidence            46678899999999999777888888999999988887776443322233455555555555544   567899999999


Q ss_pred             HHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHH
Q 017995           79 IKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVV  158 (362)
Q Consensus        79 L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~  158 (362)
                      |+.|+++|++++++|+++...++..+ +.+|+.++|+.+++++++..+||+|+.|..+++++|++|++|++|||+.+|+.
T Consensus       113 l~~l~~~g~~~~i~s~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~  191 (237)
T 4ex6_A          113 LDRLSAAGFRLAMATSKVEKAARAIA-ELTGLDTRLTVIAGDDSVERGKPHPDMALHVARGLGIPPERCVVIGDGVPDAE  191 (237)
T ss_dssp             HHHHHHTTEEEEEECSSCHHHHHHHH-HHHTGGGTCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHH
T ss_pred             HHHHHhCCCcEEEEcCCChHHHHHHH-HHcCchhheeeEEeCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHH
Confidence            99999999999999999999999888 88899999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCEEEEEcCCCCcccc--ccchhHhhcccccc
Q 017995          159 AGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDL  193 (362)
Q Consensus       159 aA~~aG~~~i~v~~~~~~~~~--~ssa~~vi~~l~el  193 (362)
                      +|+.+|+.+++|..+......  ...++.++.++.++
T Consensus       192 ~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el  228 (237)
T 4ex6_A          192 MGRAAGMTVIGVSYGVSGPDELMRAGADTVVDSFPAA  228 (237)
T ss_dssp             HHHHTTCEEEEESSSSSCHHHHHHTTCSEEESSHHHH
T ss_pred             HHHHCCCeEEEEecCCCCHHHHHhcCCCEEECCHHHH
Confidence            999999999999876432221  12456777777664

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}

Probab=99.87  E-value=4e-21  Score=170.61  Aligned_cols=191  Identities=21%  Similarity=0.209  Sum_probs=157.8

Q ss_pred             CHHHHHHHHHHHHHHcCCCCCHHHHHhhcCCCHHHHHHHHHHHhCCCCCHHHH---HHHHHHHHHhhhcCCCCCchHHHH
Q 017995            2 TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEF---VNEVYSMFSDHLCKVKALPGANRL   78 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~pgv~~~   78 (362)
                      +...+..++.++++++|++.+.+.+....|.+....+..+...++...+.+.+   ...+.+.+........++||+.++
T Consensus        20 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   99 (233)
T 3s6j_A           20 SVYQNVAAWKEALDAENIPLAMWRIHRKIGMSGGLMLKSLSRETGMSITDEQAERLSEKHAQAYERLQHQIIALPGAVEL   99 (233)
T ss_dssp             CHHHHHHHHHHHHHHTTCCCCHHHHHHHTTSCHHHHHHHHHHC----CCHHHHHHHHHHHHHHHHHTGGGCEECTTHHHH
T ss_pred             ChHHHHHHHHHHHHHcCCCCCHHHHHHHcCCcHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhccCccCCCHHHH
Confidence            45677889999999999999988888889999999888888887776665443   333334444444568999999999


Q ss_pred             HHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHH
Q 017995           79 IKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVV  158 (362)
Q Consensus        79 L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~  158 (362)
                      |+.|+++|++++++|+.+...++..+ +.+|+..+|+.+++++++..+||+|..|..+++++|++|++|++|||+.+|+.
T Consensus       100 l~~l~~~g~~~~i~s~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~i~iGD~~~Di~  178 (233)
T 3s6j_A          100 LETLDKENLKWCIATSGGIDTATINL-KALKLDINKINIVTRDDVSYGKPDPDLFLAAAKKIGAPIDECLVIGDAIWDML  178 (233)
T ss_dssp             HHHHHHTTCCEEEECSSCHHHHHHHH-HTTTCCTTSSCEECGGGSSCCTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHH
T ss_pred             HHHHHHCCCeEEEEeCCchhhHHHHH-HhcchhhhhheeeccccCCCCCCChHHHHHHHHHhCCCHHHEEEEeCCHHhHH
Confidence            99999999999999999999999888 88999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCEEEEEcCCCCcccc--ccchhHhhcccccc
Q 017995          159 AGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDL  193 (362)
Q Consensus       159 aA~~aG~~~i~v~~~~~~~~~--~ssa~~vi~~l~el  193 (362)
                      +|+++|+.+++|..+......  ...++.++.++.++
T Consensus       179 ~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~~~~el  215 (233)
T 3s6j_A          179 AARRCKATGVGLLSGGYDIGELERAGALRVYEDPLDL  215 (233)
T ss_dssp             HHHHTTCEEEEEGGGSCCHHHHHHTTCSEEESSHHHH
T ss_pred             HHHHCCCEEEEEeCCCCchHhHHhcCCCEEECCHHHH
Confidence            999999999999875322222  12357777777775

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}

Probab=99.86  E-value=9.4e-21  Score=168.78  Aligned_cols=186  Identities=26%  Similarity=0.325  Sum_probs=143.9

Q ss_pred             HHHHHHHHHHHHHHcCCCCCHHHHHhhcCCCHHHHHHHHHHHhCC--CCCHHH---HHHHHHHHHHhhhcC---CCCCch
Q 017995            3 DGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGL--PCAKHE---FVNEVYSMFSDHLCK---VKALPG   74 (362)
Q Consensus         3 e~~~~~a~~~~l~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~---~~~~~~~~~~~~~~~---~~~~pg   74 (362)
                      +..+..++.++++++|++++.+.+..+.|.+..+.++.+...++.  ..+.+.   +...+...+......   ..++||
T Consensus        17 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (233)
T 3nas_A           17 AEYHFLAWKHIAEQIDIPFDRDMNERLKGISREESLESILIFGGAETKYTNAEKQELMHRKNRDYQMLISKLTPEDLLPG   96 (233)
T ss_dssp             HHHHHHHHHHHHHHTTCCCCHHHHHHTTTCCHHHHHHHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTCCGGGSCTT
T ss_pred             HHHHHHHHHHHHHHcCCCCCHHHHHHHcCCCHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhcCcCCcCcC
Confidence            566788999999999999998889999999999999999888876  444433   334444455544422   348999


Q ss_pred             HHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCH
Q 017995           75 ANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV  154 (362)
Q Consensus        75 v~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~  154 (362)
                      +.++|+.|+++|++++++||++.  ++..+ +.+|+..+|+.+++++++..+||+|+.|..+++++|++|++|++|||+.
T Consensus        97 ~~~~l~~l~~~g~~~~i~t~~~~--~~~~l-~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~vGDs~  173 (233)
T 3nas_A           97 IGRLLCQLKNENIKIGLASSSRN--APKIL-RRLAIIDDFHAIVDPTTLAKGKPDPDIFLTAAAMLDVSPADCAAIEDAE  173 (233)
T ss_dssp             HHHHHHHHHHTTCEEEECCSCTT--HHHHH-HHTTCTTTCSEECCC---------CCHHHHHHHHHTSCGGGEEEEECSH
T ss_pred             HHHHHHHHHHCCCcEEEEcCchh--HHHHH-HHcCcHhhcCEEeeHhhCCCCCCChHHHHHHHHHcCCCHHHEEEEeCCH
Confidence            99999999999999999999865  66677 8899999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHcCCEEEEEcCCCCccccccchhHhhcccccccc
Q 017995          155 IGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRP  195 (362)
Q Consensus       155 ~d~~aA~~aG~~~i~v~~~~~~~~~~ssa~~vi~~l~el~~  195 (362)
                      +|+.+|+++|+.++++.....    ...++.++.++.++..
T Consensus       174 ~Di~~a~~aG~~~~~~~~~~~----~~~ad~v~~s~~el~~  210 (233)
T 3nas_A          174 AGISAIKSAGMFAVGVGQGQP----MLGADLVVRQTSDLTL  210 (233)
T ss_dssp             HHHHHHHHTTCEEEECC-----------CSEECSSGGGCCH
T ss_pred             HHHHHHHHcCCEEEEECCccc----cccCCEEeCChHhCCH
Confidence            999999999999999966321    1255778888877643

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A

Probab=99.86  E-value=2.4e-20  Score=167.66  Aligned_cols=189  Identities=22%  Similarity=0.330  Sum_probs=154.8

Q ss_pred             CHHHHHHHHHHHHHHcCCCCCHHHHHhhcCCCHHHHHHHHHHH-hCCCCCHHHHHHHHHHHHHhhh---cCCCCCchHHH
Q 017995            2 TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVED-YGLPCAKHEFVNEVYSMFSDHL---CKVKALPGANR   77 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~pgv~~   77 (362)
                      ++..+..++.++++++|++.+.+......|......+..+... ++...+.+.+...+.. +...+   ....++||+.+
T Consensus        38 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  116 (243)
T 3qxg_A           38 SMPYHSEAWHQVMKTHGLDLSREEAYMHEGRTGASTINIVFQRELGKEATQEEIESIYHE-KSILFNSYPEAERMPGAWE  116 (243)
T ss_dssp             CHHHHHHHHHHHHHHTTCCCCHHHHHHTTTSCHHHHHHHHHHHHHSSCCCHHHHHHHHHH-HHHHHHTSSCCCBCTTHHH
T ss_pred             CHHHHHHHHHHHHHHhCCCCCHHHHHHHhCCCHHHHHHHHHHHHhCCCCCHHHHHHHHHH-HHHHHHhcccCCCCCCHHH
Confidence            4567889999999999999988888888888888877776654 6776666554333322 22222   45789999999


Q ss_pred             HHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCC--cEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHh
Q 017995           78 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF--SVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVI  155 (362)
Q Consensus        78 ~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f--~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~  155 (362)
                      +|+.|+++|++++++||++...+...+ +. ++..+|  +.+++++++..+||+|+.|..+++++|++|++|++|||+.+
T Consensus       117 ~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~-~l~~~f~~d~i~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~  194 (243)
T 3qxg_A          117 LLQKVKSEGLTPMVVTGSGQLSLLERL-EH-NFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPL  194 (243)
T ss_dssp             HHHHHHHTTCEEEEECCCCCHHHHTTH-HH-HSTTTCCGGGEECTTTCSSCTTSSHHHHHHHHHTTCCGGGEEEEECSHH
T ss_pred             HHHHHHHcCCcEEEEeCCcHHHHHHHH-HH-hHHHhcCcceEEeHHhCCCCCCChHHHHHHHHHcCCCHHHeEEEeCCHH
Confidence            999999999999999999998888888 67 999999  99999999999999999999999999999999999999999


Q ss_pred             hHHHHHHcCCEEEEEcCCCCcccc--ccchhHhhcccccc
Q 017995          156 GVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDL  193 (362)
Q Consensus       156 d~~aA~~aG~~~i~v~~~~~~~~~--~ssa~~vi~~l~el  193 (362)
                      |+.+|+++|+.++++.++......  ...++.++.++.++
T Consensus       195 Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~s~~el  234 (243)
T 3qxg_A          195 GVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFPSMQTL  234 (243)
T ss_dssp             HHHHHHHTTCEEEEECCSSSCHHHHHHTTCSEEESCHHHH
T ss_pred             HHHHHHHCCCEEEEEeCCCCCHHHHHhcCCCEEECCHHHH
Confidence            999999999999999885433222  12356777777664

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}

Probab=99.85  E-value=2.7e-20  Score=166.91  Aligned_cols=189  Identities=22%  Similarity=0.370  Sum_probs=151.9

Q ss_pred             CHHHHHHHHHHHHHHcCCCCCHHHHHhhcCCCHHHHHHHHHHH-hCCCCCHHHHHHHHHHHHHhhh---cCCCCCchHHH
Q 017995            2 TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVED-YGLPCAKHEFVNEVYSMFSDHL---CKVKALPGANR   77 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~pgv~~   77 (362)
                      ++..+..++.++++++|.+.+.+......|......+..+... ++...+.+.+...+.. +...+   ....++||+.+
T Consensus        37 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  115 (247)
T 3dv9_A           37 SMPNHAESWHKIMKRFGFGLSREEAYMHEGRTGASTINIVSRRERGHDATEEEIKAIYQA-KTEEFNKCPKAERMPGALE  115 (247)
T ss_dssp             CHHHHHHHHHHHHHHTTCCCCHHHHHHTTTSCHHHHHHHHHHHHHSSCCCHHHHHHHHHH-HHHHHTTSCCCCBCTTHHH
T ss_pred             CHHHHHHHHHHHHHHcCCCCCHHHHHHHhCCChHHHHHHHHHHhcCCCCCHHHHHHHHHH-HHHHHHhcccCCCCCCHHH
Confidence            4567889999999999999988888888888888877776644 6776666554433322 22222   35789999999


Q ss_pred             HHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCC--cEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHh
Q 017995           78 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF--SVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVI  155 (362)
Q Consensus        78 ~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f--~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~  155 (362)
                      +|+.|+++|++++++||++...+...+ +. ++.++|  +.+++++++..+||+|+.|..+++++|++|++|++|||+.+
T Consensus       116 ~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~-~l~~~f~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~  193 (247)
T 3dv9_A          116 VLTKIKSEGLTPMVVTGSGQTSLLDRL-NH-NFPGIFQANLMVTAFDVKYGKPNPEPYLMALKKGGFKPNEALVIENAPL  193 (247)
T ss_dssp             HHHHHHHTTCEEEEECSCC---CHHHH-HH-HSTTTCCGGGEECGGGCSSCTTSSHHHHHHHHHHTCCGGGEEEEECSHH
T ss_pred             HHHHHHHcCCcEEEEcCCchHHHHHHH-Hh-hHHHhcCCCeEEecccCCCCCCCCHHHHHHHHHcCCChhheEEEeCCHH
Confidence            999999999999999999998888888 77 999999  99999999999999999999999999999999999999999


Q ss_pred             hHHHHHHcCCEEEEEcCCCCcccc--ccchhHhhcccccc
Q 017995          156 GVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDL  193 (362)
Q Consensus       156 d~~aA~~aG~~~i~v~~~~~~~~~--~ssa~~vi~~l~el  193 (362)
                      |+.+|+++|+.++++.++......  ...++.++.++.++
T Consensus       194 Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~~~~el  233 (247)
T 3dv9_A          194 GVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFHSMPDF  233 (247)
T ss_dssp             HHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEESSHHHH
T ss_pred             HHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEECCHHHH
Confidence            999999999999999885433222  12456677766664

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6

Probab=99.85  E-value=2.2e-20  Score=163.92  Aligned_cols=186  Identities=18%  Similarity=0.323  Sum_probs=148.1

Q ss_pred             CHHHHHHHHHHHHHHcCCCCCHHHHHhhcCCCHHHHHHHHHHHhCCCC-CHHHHHHHHHHHHHhhhcCCCCCchHHHHHH
Q 017995            2 TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPC-AKHEFVNEVYSMFSDHLCKVKALPGANRLIK   80 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~pgv~~~L~   80 (362)
                      |+..+.+++.++++++|.+++.+.++...|.+..+.++.+    +.+. ...+....+...+........++||+.++|+
T Consensus        18 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   93 (209)
T 2hdo_A           18 SQPAYTTVMREVLATYGKPFSPAQAQKTFPMAAEQAMTEL----GIAASEFDHFQAQYEDVMASHYDQIELYPGITSLFE   93 (209)
T ss_dssp             CHHHHHHHHHHHHHTTTCCCCHHHHHHHTTSCHHHHHHHT----TCCGGGHHHHHHHHHHHHTTCGGGCEECTTHHHHHH
T ss_pred             CHHHHHHHHHHHHHHhCCCCCHHHHHHHcCCcHHHHHHHc----CCCHHHHHHHHHHHHHHHhhhcccCCcCCCHHHHHH
Confidence            4677889999999999998888888889998877665543    4432 1222222222222222256789999999999


Q ss_pred             HHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHH
Q 017995           81 HLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAG  160 (362)
Q Consensus        81 ~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA  160 (362)
                      .|+++ ++++++|+++...++..+ +.+|+.++|+.++++++++.+||+|+.|..+++++|++|++|++|||+.+|+.+|
T Consensus        94 ~l~~~-~~~~i~s~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~i~vGD~~~Di~~a  171 (209)
T 2hdo_A           94 QLPSE-LRLGIVTSQRRNELESGM-RSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTA  171 (209)
T ss_dssp             HSCTT-SEEEEECSSCHHHHHHHH-TTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHH
T ss_pred             HHHhc-CcEEEEeCCCHHHHHHHH-HHcChHhhccEEEecCcCCCCCCCcHHHHHHHHHcCCCcccEEEECCChhhHHHH
Confidence            99999 999999999999988888 8889999999999999999999999999999999999999999999999999999


Q ss_pred             HHcCCEEEEEcCCCCccccccchhHhhcccccc
Q 017995          161 KAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL  193 (362)
Q Consensus       161 ~~aG~~~i~v~~~~~~~~~~ssa~~vi~~l~el  193 (362)
                      +++|+.++++.++.........++.++.++.++
T Consensus       172 ~~aG~~~~~~~~~~~~~~~~~~a~~~~~~~~el  204 (209)
T 2hdo_A          172 QAANVDFGLAVWGMDPNADHQKVAHRFQKPLDI  204 (209)
T ss_dssp             HHHTCEEEEEGGGCCTTGGGSCCSEEESSGGGG
T ss_pred             HHcCCeEEEEcCCCCChhhhccCCEEeCCHHHH
Confidence            999999999986432222222256677776664

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6

Probab=99.85  E-value=7.4e-20  Score=165.21  Aligned_cols=191  Identities=16%  Similarity=0.201  Sum_probs=151.9

Q ss_pred             CHHHHHHHHHHHHHHcCCCC-CHHHHHhhcCCCHHHHHHHHHHHh----CCCCCHHH---HHHHHHHHHHhhh-cCCCCC
Q 017995            2 TDGMFSEVLKTFLVKYGKEW-DGREKHKIVGKTPLEEAAIIVEDY----GLPCAKHE---FVNEVYSMFSDHL-CKVKAL   72 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~~-~~~~~~~~~g~~~~~~~~~~~~~~----~~~~~~~~---~~~~~~~~~~~~~-~~~~~~   72 (362)
                      |+..+..++.++++++|.+. +.+.+..+.|......++.+....    +...+.+.   +.+.+.+.|.... ...+++
T Consensus        37 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  116 (243)
T 2hsz_A           37 SLPDLALSINSALKDVNLPQASENLVMTWIGNGADVLSQRAVDWACKQAEKELTEDEFKYFKRQFGFYYGENLCNISRLY  116 (243)
T ss_dssp             CHHHHHHHHHHHHHHTTCCCCCHHHHHHHCSSCHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHTTSSCEEC
T ss_pred             CHHHHHHHHHHHHHHcCCCCCCHHHHHHHhCchHHHHHHHHhhhhhccccccCCHHHHHHHHHHHHHHHHHhccccCccC
Confidence            46678899999999999874 566677888888777666554432    33333332   3344444444443 467899


Q ss_pred             chHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEec
Q 017995           73 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIED  152 (362)
Q Consensus        73 pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igD  152 (362)
                      ||+.++|+.|+++|++++++||++...++..+ +.+|+.++|+.+++++++...||+|+.|..+++++|++|++|++|||
T Consensus       117 ~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD  195 (243)
T 2hsz_A          117 PNVKETLEALKAQGYILAVVTNKPTKHVQPIL-TAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILFVGD  195 (243)
T ss_dssp             TTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHTTCGGGCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEEEES
T ss_pred             CCHHHHHHHHHHCCCEEEEEECCcHHHHHHHH-HHcCchheEEEEEecccCCCCCcCHHHHHHHHHHhCcChhhEEEEcC
Confidence            99999999999999999999999999988888 88999999999999999999999999999999999999999999999


Q ss_pred             CHhhHHHHHHcCCEEEEEcCCCCccc--cccchhHhhcccccc
Q 017995          153 SVIGVVAGKAAGMEVVAVPSLPKQTH--RYTAADEVINSLLDL  193 (362)
Q Consensus       153 s~~d~~aA~~aG~~~i~v~~~~~~~~--~~ssa~~vi~~l~el  193 (362)
                      +.+|+.+|+++|+.+++|.++.....  ....++.++.++.++
T Consensus       196 ~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~~~~el  238 (243)
T 2hsz_A          196 SQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADI  238 (243)
T ss_dssp             SHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGG
T ss_pred             CHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEECCHHHH
Confidence            99999999999999999987533211  123456777777664

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A

Probab=99.84  E-value=2.7e-20  Score=168.93  Aligned_cols=191  Identities=28%  Similarity=0.392  Sum_probs=159.0

Q ss_pred             CHHHHHHHHHHHHHHcCCCCCHHH-HHhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhcCCCCCchHHHHHH
Q 017995            2 TDGMFSEVLKTFLVKYGKEWDGRE-KHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIK   80 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~~~L~   80 (362)
                      +...+..++.++++++|.+.+.+. +..+.|.+..+.++.+...++...+.+ ....+.+.+.+......++||+.++|+
T Consensus        42 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~  120 (259)
T 4eek_A           42 SEGIIAQVWQSVLAERGLHLDLTEIAMYFTGQRFDGVLAYLAQQHDFVPPPD-FLDVLETRFNAAMTGVTAIEGAAETLR  120 (259)
T ss_dssp             CHHHHHHHHHHHHHHTTCCCCHHHHHHHTTTCCHHHHHHHHHHHHCCCCCTT-HHHHHHHHHHHHHTTCEECTTHHHHHH
T ss_pred             CHHHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHHHcCCCCCHH-HHHHHHHHHHHHhccCCcCccHHHHHH
Confidence            456788999999999999887654 577889999999998888888765533 333444444444477899999999999


Q ss_pred             HHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcE-EEeCCCCC-CCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHH
Q 017995           81 HLSCHGVPMALASNSHRATIESKISYQHGWNESFSV-IVGSDEVR-TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVV  158 (362)
Q Consensus        81 ~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~-iv~~~d~~-~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~  158 (362)
                      .|+++|++++++||.+...++..+ +.+|+.++|+. +++++++. .+||+|+.|..+++++|++|++|++|||+.+|+.
T Consensus       121 ~l~~~g~~~~i~s~~~~~~~~~~l-~~~~l~~~f~~~i~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~  199 (259)
T 4eek_A          121 ALRAAGVPFAIGSNSERGRLHLKL-RVAGLTELAGEHIYDPSWVGGRGKPHPDLYTFAAQQLGILPERCVVIEDSVTGGA  199 (259)
T ss_dssp             HHHHHTCCEEEECSSCHHHHHHHH-HHTTCHHHHCSCEECGGGGTTCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHH
T ss_pred             HHHHCCCeEEEEeCCCHHHHHHHH-HhcChHhhccceEEeHhhcCcCCCCChHHHHHHHHHcCCCHHHEEEEcCCHHHHH
Confidence            999999999999999999999888 88999999999 99999999 9999999999999999999999999999999999


Q ss_pred             HHHHcCCEEEEEcCCCCc----ccc--ccchhHhhccccccc
Q 017995          159 AGKAAGMEVVAVPSLPKQ----THR--YTAADEVINSLLDLR  194 (362)
Q Consensus       159 aA~~aG~~~i~v~~~~~~----~~~--~ssa~~vi~~l~el~  194 (362)
                      +|+++|+.++++.++...    .+.  ...++.++.++.++.
T Consensus       200 ~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~ad~vi~~l~el~  241 (259)
T 4eek_A          200 AGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVLTSHAELR  241 (259)
T ss_dssp             HHHHHTCEEEEECCTTSCCSSCHHHHHHHTCSEEECSHHHHH
T ss_pred             HHHHCCCEEEEEccCCCcccccHHHHHhcCcchhhCCHHHHH
Confidence            999999999999875322    111  133577788877753

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0

Probab=99.84  E-value=3.7e-20  Score=163.98  Aligned_cols=188  Identities=16%  Similarity=0.152  Sum_probs=151.6

Q ss_pred             CHHHHHHHHHHHHHHcCCCC-CHHHHHhhcCCCHHHHHHHHHHHhCCCCC-HHHHHHHHHHHHHhhh-cCCCCCchHHHH
Q 017995            2 TDGMFSEVLKTFLVKYGKEW-DGREKHKIVGKTPLEEAAIIVEDYGLPCA-KHEFVNEVYSMFSDHL-CKVKALPGANRL   78 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~pgv~~~   78 (362)
                      |+..+..++.++++++|.+. +.+.+....|.+..+.+..+.   +.+.. ...+...+...+.... ....++||+.++
T Consensus        18 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (226)
T 3mc1_A           18 SAEGITKSVKYSLNKFDIQVEDLSSLNKFVGPPLKTSFMEYY---NFDEETATVAIDYYRDYFKAKGMFENKVYDGIEAL   94 (226)
T ss_dssp             CHHHHHHHHHHHHHTTTCCCSCGGGGGGGSSSCHHHHHHHHH---CCCHHHHHHHHHHHHHHHTTTGGGSCCBCTTHHHH
T ss_pred             CHHHHHHHHHHHHHHcCCCCCCHHHHHHHhCcCHHHHHHHHh---CCCHHHHHHHHHHHHHHHHHhCcccCccCcCHHHH
Confidence            45678899999999999875 556778888988877765543   44311 1233333444443322 457899999999


Q ss_pred             HHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHH
Q 017995           79 IKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVV  158 (362)
Q Consensus        79 L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~  158 (362)
                      |+.|+++|++++++|++....++..+ +.+|+..+|+.+++++++..+||+|+.|..+++++|++|++|++|||+.+|+.
T Consensus        95 l~~l~~~g~~~~i~t~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~  173 (226)
T 3mc1_A           95 LSSLKDYGFHLVVATSKPTVFSKQIL-EHFKLAFYFDAIVGSSLDGKLSTKEDVIRYAMESLNIKSDDAIMIGDREYDVI  173 (226)
T ss_dssp             HHHHHHHTCEEEEEEEEEHHHHHHHH-HHTTCGGGCSEEEEECTTSSSCSHHHHHHHHHHHHTCCGGGEEEEESSHHHHH
T ss_pred             HHHHHHCCCeEEEEeCCCHHHHHHHH-HHhCCHhheeeeeccCCCCCCCCCHHHHHHHHHHhCcCcccEEEECCCHHHHH
Confidence            99999999999999999999999888 88999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCEEEEEcCCCCccccc--cchhHhhcccccc
Q 017995          159 AGKAAGMEVVAVPSLPKQTHRY--TAADEVINSLLDL  193 (362)
Q Consensus       159 aA~~aG~~~i~v~~~~~~~~~~--ssa~~vi~~l~el  193 (362)
                      +|+++|+.+++|..+.......  ..++.++.++.++
T Consensus       174 ~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~s~~el  210 (226)
T 3mc1_A          174 GALKNNLPSIGVTYGFGSYEELKNAGANYIVNSVDEL  210 (226)
T ss_dssp             HHHTTTCCEEEESSSSSCHHHHHHHTCSEEESSHHHH
T ss_pred             HHHHCCCCEEEEccCCCCHHHHHHcCCCEEECCHHHH
Confidence            9999999999998754332221  3457777777764

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}

Probab=99.83  E-value=5.3e-20  Score=164.94  Aligned_cols=188  Identities=13%  Similarity=0.162  Sum_probs=152.2

Q ss_pred             CHHHHHHHHHHHHHHcCCCCCHHHHHhhcCCCHHHHHHHHHHHhCCCC-CHHHHHHHHHHHHHhhh-cCCCCCchHHHHH
Q 017995            2 TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPC-AKHEFVNEVYSMFSDHL-CKVKALPGANRLI   79 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~pgv~~~L   79 (362)
                      +...+..++.++++++|.+.+.+.+....|.+..+.+...   ++.+. ...++...+.+.+.... ....++||+.++|
T Consensus        43 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  119 (240)
T 3sd7_A           43 PKEGITKSIQYSLNSFGIKEDLENLDQFIGPPLHDTFKEY---YKFEDKKAKEAVEKYREYFADKGIFENKIYENMKEIL  119 (240)
T ss_dssp             CHHHHHHHHHHHHHHTTCCCCGGGGGGGSSSCHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHTGGGCCEECTTHHHHH
T ss_pred             CHHHHHHHHHHHHHHcCCCCCHHHHHHHhCccHHHHHHHH---hCCCHHHHHHHHHHHHHHHHHhcccccccCccHHHHH
Confidence            4567888999999999999877888889998887765443   34331 12333444444444432 4688999999999


Q ss_pred             HHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCC-CCcEEEEecCHhhHH
Q 017995           80 KHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME-PSSSLVIEDSVIGVV  158 (362)
Q Consensus        80 ~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~-p~~~l~igDs~~d~~  158 (362)
                      +.|+++|++++++|+++...++..+ +.+|+..+|+.++++++...+||+|+.|..+++++|++ |++|++|||+.+|+.
T Consensus       120 ~~l~~~g~~~~i~s~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~Di~  198 (240)
T 3sd7_A          120 EMLYKNGKILLVATSKPTVFAETIL-RYFDIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLCNVKDKDKVIMVGDRKYDII  198 (240)
T ss_dssp             HHHHHTTCEEEEEEEEEHHHHHHHH-HHTTCGGGCSEEEEECTTSCCCCHHHHHHHHHHHHTCCCGGGEEEEESSHHHHH
T ss_pred             HHHHHCCCeEEEEeCCcHHHHHHHH-HHcCcHhhEEEEEeccccCCCCCCHHHHHHHHHHcCCCCCCcEEEECCCHHHHH
Confidence            9999999999999999999999888 88999999999999999999999999999999999999 999999999999999


Q ss_pred             HHHHcCCEEEEEcCCCCccccc--cchhHhhcccccc
Q 017995          159 AGKAAGMEVVAVPSLPKQTHRY--TAADEVINSLLDL  193 (362)
Q Consensus       159 aA~~aG~~~i~v~~~~~~~~~~--ssa~~vi~~l~el  193 (362)
                      +|+++|+.+++|..+.......  ..++.++.++.++
T Consensus       199 ~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el  235 (240)
T 3sd7_A          199 GAKKIGIDSIGVLYGYGSFEEISESEPTYIVENVESI  235 (240)
T ss_dssp             HHHHHTCEEEEESSSSCCHHHHHHHCCSEEESSSTTH
T ss_pred             HHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECCHHHH
Confidence            9999999999998754332222  3456677776664

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A

Probab=99.83  E-value=2.6e-19  Score=159.37  Aligned_cols=187  Identities=17%  Similarity=0.177  Sum_probs=146.7

Q ss_pred             HHHHHHHHHHHHHHcCCCCCHHHHHhhcCC-------------C----HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhh
Q 017995            3 DGMFSEVLKTFLVKYGKEWDGREKHKIVGK-------------T----PLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH   65 (362)
Q Consensus         3 e~~~~~a~~~~l~~~g~~~~~~~~~~~~g~-------------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   65 (362)
                      ...+..++.++++++|++........+.+.             +    ..+.+..+...++.+.+...+...+...+.  
T Consensus        22 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--   99 (238)
T 3ed5_A           22 QAAEALALRLLFEDQNIPLTNDMKAQYKTINQGLWRAFEEGKMTRDEVVNTRFSALLKEYGYEADGALLEQKYRRFLE--   99 (238)
T ss_dssp             HHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHT--
T ss_pred             chhHHHHHHHHHHHcCCCcchHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHH--
Confidence            456788999999999998876544332211             1    112334555666766655544433333222  


Q ss_pred             hcCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcC-CCC
Q 017995           66 LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN-MEP  144 (362)
Q Consensus        66 ~~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~-~~p  144 (362)
                       ....++||+.++|+.|+++ ++++++||.+...++..+ +.+|+..+|+.+++++++..+||+|+.|..+++++| ++|
T Consensus       100 -~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~  176 (238)
T 3ed5_A          100 -EGHQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRL-RDSGLFPFFKDIFVSEDTGFQKPMKEYFNYVFERIPQFSA  176 (238)
T ss_dssp             -TCCCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHH-HHTTCGGGCSEEEEGGGTTSCTTCHHHHHHHHHTSTTCCG
T ss_pred             -hcCCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHH-HHcChHhhhheEEEecccCCCCCChHHHHHHHHHcCCCCh
Confidence             3578999999999999999 999999999999988888 889999999999999999999999999999999999 999


Q ss_pred             CcEEEEecCH-hhHHHHHHcCCEEEEEcCCCCccccccchhHhhccccccc
Q 017995          145 SSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLR  194 (362)
Q Consensus       145 ~~~l~igDs~-~d~~aA~~aG~~~i~v~~~~~~~~~~ssa~~vi~~l~el~  194 (362)
                      ++|++|||+. +|+.+|+++|+.++++..+.........++.+++++.++.
T Consensus       177 ~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~~~~el~  227 (238)
T 3ed5_A          177 EHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRKLEELY  227 (238)
T ss_dssp             GGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEESSGGGHH
T ss_pred             hHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEECCHHHHH
Confidence            9999999998 9999999999999999876433333335678888888753

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}

Probab=99.82  E-value=1.4e-19  Score=165.23  Aligned_cols=187  Identities=21%  Similarity=0.222  Sum_probs=148.2

Q ss_pred             HHHHHHHHHHHHcCCCCCHHHHHhh------------------cCCCHHHHH----HHHHHHhCCCCCHHHHHHHHHHHH
Q 017995            5 MFSEVLKTFLVKYGKEWDGREKHKI------------------VGKTPLEEA----AIIVEDYGLPCAKHEFVNEVYSMF   62 (362)
Q Consensus         5 ~~~~a~~~~l~~~g~~~~~~~~~~~------------------~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~   62 (362)
                      .+..++.++++++|++++.+.+...                  .|....+.+    ..++...+. .+.+.+.......+
T Consensus        18 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~   96 (263)
T 3k1z_A           18 PLGEAYATKARAHGLEVEPSALEQGFRQAYRAQSHSFPNYGLSHGLTSRQWWLDVVLQTFHLAGV-QDAQAVAPIAEQLY   96 (263)
T ss_dssp             CHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHSTGGGGGGTCCHHHHHHHHHHHHHHHTTC-CCHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhhhhccccccccCCCHHHHHHHHHHHHHHHcCC-CCHHHHHHHHHHHH
Confidence            4567899999999998887665332                  465555443    344444555 35566656566666


Q ss_pred             Hhhhc--CCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHc
Q 017995           63 SDHLC--KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL  140 (362)
Q Consensus        63 ~~~~~--~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~  140 (362)
                      .....  .+.++||+.++|+.|+++|++++|+||++.. +...+ +.+|+..+|+.+++++++..+||+|++|..+++++
T Consensus        97 ~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l-~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~  174 (263)
T 3k1z_A           97 KDFSHPCTWQVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGIL-GGLGLREHFDFVLTSEAAGWPKPDPRIFQEALRLA  174 (263)
T ss_dssp             HHTTSGGGEEECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHH-HHTTCGGGCSCEEEHHHHSSCTTSHHHHHHHHHHH
T ss_pred             HHhcCcccceECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHH-HhCCcHHhhhEEEeecccCCCCCCHHHHHHHHHHc
Confidence            65552  4689999999999999999999999998875 57777 88999999999999999999999999999999999


Q ss_pred             CCCCCcEEEEecCH-hhHHHHHHcCCEEEEEcCCCCccc---cccchhHhhccccccc
Q 017995          141 NMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTH---RYTAADEVINSLLDLR  194 (362)
Q Consensus       141 ~~~p~~~l~igDs~-~d~~aA~~aG~~~i~v~~~~~~~~---~~ssa~~vi~~l~el~  194 (362)
                      |++|++|+||||+. +|+.+|+++|+.++++.++.....   ....++.++.++.++.
T Consensus       175 g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~~l~el~  232 (263)
T 3k1z_A          175 HMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPSLAHLL  232 (263)
T ss_dssp             TCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEESSGGGHH
T ss_pred             CCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeCCHHHHH
Confidence            99999999999997 999999999999999988643222   1224678888888753

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0

Probab=99.82  E-value=2e-19  Score=163.98  Aligned_cols=167  Identities=16%  Similarity=0.230  Sum_probs=139.8

Q ss_pred             HHHHHHHHHHcCCCCCHHHHHhhcCCCHHHHHHHH----------HHHhCCCCCHHH---HHHHHHHHHHhhh-cCCCCC
Q 017995            7 SEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAII----------VEDYGLPCAKHE---FVNEVYSMFSDHL-CKVKAL   72 (362)
Q Consensus         7 ~~a~~~~l~~~g~~~~~~~~~~~~g~~~~~~~~~~----------~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~   72 (362)
                      ..++.++++++|++++.+..+.+.|......+..+          ...++...+.+.   +...+...+.... ....++
T Consensus        34 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  113 (277)
T 3iru_A           34 VYAFMELFKQEGIEVTQAEAREPMGTEKSEHIRRMLGNSRIANAWLSIKGQASNEEDIKRLYDLFAPIQTRIVAQRSQLI  113 (277)
T ss_dssp             HHHHHHHHHTTTCCCCHHHHHTTTTSCHHHHHHHHTTSHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHHTCCBC
T ss_pred             HHHHHHHHHHhCCCCCHHHHHHHhcCchHHHHHHhccchHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhccCccC
Confidence            68899999999999888888888888765554433          344565555443   3333333343333 468999


Q ss_pred             chHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCC-CcEEEeCCCCCCCCCCHHHHHHHHHHcCCCC-CcEEEE
Q 017995           73 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNES-FSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP-SSSLVI  150 (362)
Q Consensus        73 pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~-f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p-~~~l~i  150 (362)
                      ||+.++|+.|+++|++++++||.+...++..+ +.+++.++ |+.+++++++..+||+|..|..+++++|++| ++|++|
T Consensus       114 ~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~i~v  192 (277)
T 3iru_A          114 PGWKEVFDKLIAQGIKVGGNTGYGPGMMAPAL-IAAKEQGYTPASTVFATDVVRGRPFPDMALKVALELEVGHVNGCIKV  192 (277)
T ss_dssp             TTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHHHHTTCCCSEEECGGGSSSCTTSSHHHHHHHHHHTCSCGGGEEEE
T ss_pred             cCHHHHHHHHHHcCCeEEEEeCCchHHHHHHH-HhcCcccCCCceEecHHhcCCCCCCHHHHHHHHHHcCCCCCccEEEE
Confidence            99999999999999999999999999988888 78888888 8999999999999999999999999999999 999999


Q ss_pred             ecCHhhHHHHHHcCCEEEEEcCCC
Q 017995          151 EDSVIGVVAGKAAGMEVVAVPSLP  174 (362)
Q Consensus       151 gDs~~d~~aA~~aG~~~i~v~~~~  174 (362)
                      ||+.+|+.+|+++|+.+++|.++.
T Consensus       193 GD~~~Di~~a~~aG~~~v~v~~g~  216 (277)
T 3iru_A          193 DDTLPGIEEGLRAGMWTVGVSCSG  216 (277)
T ss_dssp             ESSHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCHHHHHHHHHCCCeEEEEecCC
Confidence            999999999999999999998864

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=99.81  E-value=5.3e-19  Score=157.36  Aligned_cols=187  Identities=19%  Similarity=0.179  Sum_probs=146.8

Q ss_pred             HHHHHHHHHHHHHHcCCCC---CHHHHH-hhcC-------------CCHH----HHHHHHHHHhCCCCCHHHHHHHHHHH
Q 017995            3 DGMFSEVLKTFLVKYGKEW---DGREKH-KIVG-------------KTPL----EEAAIIVEDYGLPCAKHEFVNEVYSM   61 (362)
Q Consensus         3 e~~~~~a~~~~l~~~g~~~---~~~~~~-~~~g-------------~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~   61 (362)
                      ...+..++.++++++|++.   +.+... .+.+             .+..    ..+..+....+.+ . .+....+...
T Consensus        20 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~   97 (240)
T 3qnm_A           20 SRNARDTFEEVYQKYSFDRYFDSFDHYYTLYQRRNTELWLEYGEGKVTKEELNRQRFFYPLQAVGVE-D-EALAERFSED   97 (240)
T ss_dssp             HHHHHHHHHHHHHHTTGGGTSSSHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHTTCC-C-HHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHcCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHcCCC-c-HHHHHHHHHH
Confidence            4567788999999999876   554432 2211             1111    2244555566665 3 3444555555


Q ss_pred             HHhhh-cCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHc
Q 017995           62 FSDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL  140 (362)
Q Consensus        62 ~~~~~-~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~  140 (362)
                      +.... ....++||+.++|+.|+ +|++++++||++...++..+ +.+++..+|+.+++++++..+||+|+.|..+++++
T Consensus        98 ~~~~~~~~~~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~l  175 (240)
T 3qnm_A           98 FFAIIPTKSGLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKM-RSAGVDRYFKKIILSEDLGVLKPRPEIFHFALSAT  175 (240)
T ss_dssp             HHHHGGGCCCBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHH-HHHTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHT
T ss_pred             HHHHhhhcCCcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHH-HHcChHhhceeEEEeccCCCCCCCHHHHHHHHHHc
Confidence            55444 56899999999999999 99999999999999988888 88899999999999999999999999999999999


Q ss_pred             CCCCCcEEEEecCH-hhHHHHHHcCCEEEEEcCCCCccccccchhHhhccccccc
Q 017995          141 NMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLR  194 (362)
Q Consensus       141 ~~~p~~~l~igDs~-~d~~aA~~aG~~~i~v~~~~~~~~~~ssa~~vi~~l~el~  194 (362)
                      |++|++|++|||+. +|+.+|+++|+.++++..... ......++.++.++.++.
T Consensus       176 gi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~-~~~~~~~d~vi~sl~e~~  229 (240)
T 3qnm_A          176 QSELRESLMIGDSWEADITGAHGVGMHQAFYNVTER-TVFPFQPTYHIHSLKELM  229 (240)
T ss_dssp             TCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCC-CCCSSCCSEEESSTHHHH
T ss_pred             CCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCC-CCcCCCCceEECCHHHHH
Confidence            99999999999996 999999999999999988653 122335688999888853

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6

Probab=99.81  E-value=1.7e-18  Score=152.51  Aligned_cols=191  Identities=22%  Similarity=0.341  Sum_probs=154.6

Q ss_pred             CHHHHHHHHHHHHHHcCCCCC-HHHHHhhcCCCHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHhhh-cCCCCCchHHHH
Q 017995            2 TDGMFSEVLKTFLVKYGKEWD-GREKHKIVGKTPLEEAAIIVEDYGLP-CAKHEFVNEVYSMFSDHL-CKVKALPGANRL   78 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~pgv~~~   78 (362)
                      ++..+..++.++++++|.+.. .+.+....|.+..+.+..+....+.. ....++...+...+.+.. ....++||+.++
T Consensus        23 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (226)
T 1te2_A           23 SEPLWDRAELDVMASLGVDISRRNELPDTLGLRIDMVVDLWYARQPWNGPSRQEVVERVIARAISLVEETRPLLPGVREA  102 (226)
T ss_dssp             CHHHHHHHHHHHHHHTTCCGGGGGGSCCCTTCCHHHHHHHHHHHSCCSSSCHHHHHHHHHHHHHHHHHHHCCBCTTHHHH
T ss_pred             CHHHHHHHHHHHHHHcCCCCChHHHHHHHhCCCHHHHHHHHHHHcCCCccCHHHHHHHHHHHHHHHHhccCCcCccHHHH
Confidence            456677889999999998765 45556778888888777777665543 244555555555554433 457889999999


Q ss_pred             HHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHH
Q 017995           79 IKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVV  158 (362)
Q Consensus        79 L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~  158 (362)
                      |+.|++.|++++++|+.+...++..+ +.+++..+|+.++++++...+||+|..+..+++++|++|++|++|||+.+|+.
T Consensus       103 l~~l~~~g~~~~i~t~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~i~~~~~i~iGD~~nDi~  181 (226)
T 1te2_A          103 VALCKEQGLLVGLASASPLHMLEKVL-TMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMI  181 (226)
T ss_dssp             HHHHHHTTCEEEEEESSCHHHHHHHH-HHTTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSCGGGEEEEESSHHHHH
T ss_pred             HHHHHHCCCcEEEEeCCcHHHHHHHH-HhcCcHhhCcEEEeccccCCCCCChHHHHHHHHHcCCCHHHeEEEeCCHHHHH
Confidence            99999999999999999999888888 88899999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCEEEEEcCCCCcc-ccccchhHhhcccccc
Q 017995          159 AGKAAGMEVVAVPSLPKQT-HRYTAADEVINSLLDL  193 (362)
Q Consensus       159 aA~~aG~~~i~v~~~~~~~-~~~ssa~~vi~~l~el  193 (362)
                      +|+.+|+.++++.++.... .....++.++.++.++
T Consensus       182 ~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~~~~~el  217 (226)
T 1te2_A          182 ASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTEL  217 (226)
T ss_dssp             HHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGC
T ss_pred             HHHHcCCEEEEEcCCCCcccccccccCeEECCHHHH
Confidence            9999999999998754322 1223456777777764

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6

Probab=99.81  E-value=1.7e-19  Score=160.37  Aligned_cols=189  Identities=17%  Similarity=0.223  Sum_probs=145.8

Q ss_pred             HHHHHHHHHHHHHH-cCCCCCHHHHHhhcCCCHHHHHHHHHHHhCCCCC-----HHHHHHHHHHHHHhhh--cCCCCCch
Q 017995            3 DGMFSEVLKTFLVK-YGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA-----KHEFVNEVYSMFSDHL--CKVKALPG   74 (362)
Q Consensus         3 e~~~~~a~~~~l~~-~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~--~~~~~~pg   74 (362)
                      +..+..++.+++++ +|.+.+ +......|.+..+.++.+...++.+.+     ...+...+...+....  ....++||
T Consensus        19 ~~~~~~~~~~~~~~~~g~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   97 (234)
T 2hcf_A           19 ESMNRRVLADALIEVYGTEGS-TGSHDFSGKMDGAIIYEVLSNVGLERAEIADKFDKAKETYIALFRERARREDITLLEG   97 (234)
T ss_dssp             CTHHHHHHHHHHHHHHSCCCC-C---CCTTCCHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCCGGGEEECTT
T ss_pred             ccchHHHHHHHHHHHhCCCCc-cchhhhcCCChHHHHHHHHHHcCCCcccchhHHHHHHHHHHHHHHHHhccCCCCcCCC
Confidence            45677889999988 788776 556677888888877778777776533     1233333444443332  35678999


Q ss_pred             HHHHHHHHHHC-CCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCC-CCCCCHHHHHHHHHHcC--CCCCcEEEE
Q 017995           75 ANRLIKHLSCH-GVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR-TGKPSPDIFLEAAKRLN--MEPSSSLVI  150 (362)
Q Consensus        75 v~~~L~~L~~~-g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~-~gKp~p~~~~~~~~~~~--~~p~~~l~i  150 (362)
                      +.++|+.|+++ |++++++|+++...++..+ +.+|+.++|+.++++++.. .+||.|..+..+++++|  ++|++|++|
T Consensus        98 ~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~~k~~~~~~~~~~~~lg~~~~~~~~i~i  176 (234)
T 2hcf_A           98 VRELLDALSSRSDVLLGLLTGNFEASGRHKL-KLPGIDHYFPFGAFADDALDRNELPHIALERARRMTGANYSPSQIVII  176 (234)
T ss_dssp             HHHHHHHHHTCTTEEEEEECSSCHHHHHHHH-HTTTCSTTCSCEECTTTCSSGGGHHHHHHHHHHHHHCCCCCGGGEEEE
T ss_pred             HHHHHHHHHhCCCceEEEEcCCcHHHHHHHH-HHCCchhhcCcceecCCCcCccchHHHHHHHHHHHhCCCCCcccEEEE
Confidence            99999999999 9999999999999988888 8899999999988888875 45788999999999999  999999999


Q ss_pred             ecCHhhHHHHHHcCCEEEEEcCCCCccccc--cchhHhhcccccc
Q 017995          151 EDSVIGVVAGKAAGMEVVAVPSLPKQTHRY--TAADEVINSLLDL  193 (362)
Q Consensus       151 gDs~~d~~aA~~aG~~~i~v~~~~~~~~~~--ssa~~vi~~l~el  193 (362)
                      ||+.+|+.+|+++|+.+++|.++.......  ..++.++.++.++
T Consensus       177 GD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~~~a~~v~~~~~el  221 (234)
T 2hcf_A          177 GDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAET  221 (234)
T ss_dssp             ESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESCSCCH
T ss_pred             CCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEeCCHHhH
Confidence            999999999999999999998754322211  1246666666654

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A

Probab=99.81  E-value=8.1e-19  Score=160.36  Aligned_cols=125  Identities=22%  Similarity=0.333  Sum_probs=108.2

Q ss_pred             cCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCc
Q 017995           67 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS  146 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~  146 (362)
                      ...+++||+.++|+.|++ +++++|+||++...++..+ +.+|+..+|+.+++++++..+||+|++|..+++++|++|++
T Consensus       118 ~~~~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l-~~~gl~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~  195 (260)
T 2gfh_A          118 QHMILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKI-EACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGD  195 (260)
T ss_dssp             HTCCCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHH-HHHTCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGGG
T ss_pred             hcCCCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHH-HhcCHHhhhheEEecCCCCCCCCCHHHHHHHHHHcCCChhh
Confidence            568899999999999998 5999999999999988888 88999999999999999999999999999999999999999


Q ss_pred             EEEEecC-HhhHHHHHHcCC-EEEEEcCCCCccc-cccchhHhhcccccc
Q 017995          147 SLVIEDS-VIGVVAGKAAGM-EVVAVPSLPKQTH-RYTAADEVINSLLDL  193 (362)
Q Consensus       147 ~l~igDs-~~d~~aA~~aG~-~~i~v~~~~~~~~-~~ssa~~vi~~l~el  193 (362)
                      |+||||+ .+|+++|+++|+ .++++........ ....++.++.++.++
T Consensus       196 ~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i~~~~el  245 (260)
T 2gfh_A          196 CVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLEL  245 (260)
T ss_dssp             EEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESSGGGH
T ss_pred             EEEECCCchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEECCHHHH
Confidence            9999995 899999999999 8999976432211 122456677777664

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}

Probab=99.80  E-value=9e-19  Score=157.26  Aligned_cols=188  Identities=17%  Similarity=0.186  Sum_probs=137.9

Q ss_pred             HHHHHHHHHHHHHHcC---CCCCHHHHH-hhc-C-----CCHHHHHHHHHHHh-CCCCCHHHHHHHHHHHHHhhh-cCCC
Q 017995            3 DGMFSEVLKTFLVKYG---KEWDGREKH-KIV-G-----KTPLEEAAIIVEDY-GLPCAKHEFVNEVYSMFSDHL-CKVK   70 (362)
Q Consensus         3 e~~~~~a~~~~l~~~g---~~~~~~~~~-~~~-g-----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~   70 (362)
                      +..+..++.+++++++   .....+... .+. |     ......+..+...+ +... ... ...+.+.+.... ....
T Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~   94 (241)
T 2hoq_A           17 SKLAEIARKNAIENMIRHGLPVDFETAYSELIELIKEYGSNFPYHFDYLLRRLDLPYN-PKW-ISAGVIAYHNTKFAYLR   94 (241)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCSCHHHHHHHHHHHHHHHCTTCTTHHHHHHHHTTCCCC-HHH-HHHHHHHHHHHHHHHCC
T ss_pred             hhhHHHHHHHHHHHHHHccccccHHHHHHHHHHhhcccchhHHHHHHHHHHHhcCCcc-chH-HHHHHHHHHHHHHhhCC
Confidence            5567778888888764   455544332 211 1     11122344555555 5442 222 233334444333 3577


Q ss_pred             CCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEE
Q 017995           71 ALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVI  150 (362)
Q Consensus        71 ~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~i  150 (362)
                      ++||+.++|+.|+++|++++++||++...++..+ +.+|+..+|+.++++++++.+||+|+.|..+++++|++|++|++|
T Consensus        95 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~i~i  173 (241)
T 2hoq_A           95 EVPGARKVLIRLKELGYELGIITDGNPVKQWEKI-LRLELDDFFEHVIISDFEGVKKPHPKIFKKALKAFNVKPEEALMV  173 (241)
T ss_dssp             BCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHH-HHTTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHTCCGGGEEEE
T ss_pred             CCccHHHHHHHHHHCCCEEEEEECCCchhHHHHH-HHcCcHhhccEEEEeCCCCCCCCCHHHHHHHHHHcCCCcccEEEE
Confidence            8999999999999999999999999999988888 889999999999999999999999999999999999999999999


Q ss_pred             ecCH-hhHHHHHHcCCEEEEEcCCCCcccccc---chhHhhcccccc
Q 017995          151 EDSV-IGVVAGKAAGMEVVAVPSLPKQTHRYT---AADEVINSLLDL  193 (362)
Q Consensus       151 gDs~-~d~~aA~~aG~~~i~v~~~~~~~~~~s---sa~~vi~~l~el  193 (362)
                      ||+. +|+.+|+++|+.++++.++........   .++.++.++.++
T Consensus       174 GD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~i~~~~el  220 (241)
T 2hoq_A          174 GDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEIDNLESL  220 (241)
T ss_dssp             ESCTTTTHHHHHHTTCEEEEECCSCCCHHHHTTGGGCSEEESSTTHH
T ss_pred             CCCchHhHHHHHHCCCEEEEECCCCCCcccccccCCCCEEECCHHHH
Confidence            9998 999999999999999976543222111   345666666654

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}

Probab=99.80  E-value=8.8e-19  Score=155.43  Aligned_cols=187  Identities=14%  Similarity=0.124  Sum_probs=141.0

Q ss_pred             HHHHHHHHHHHHHHcCCCCCHHH---HHhh----------cCCCHH---HHHHHHHHHhCCCCCHHHHHHHHHHHHHhhh
Q 017995            3 DGMFSEVLKTFLVKYGKEWDGRE---KHKI----------VGKTPL---EEAAIIVEDYGLPCAKHEFVNEVYSMFSDHL   66 (362)
Q Consensus         3 e~~~~~a~~~~l~~~g~~~~~~~---~~~~----------~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   66 (362)
                      +..+.+++.++++++|.+.....   +...          .|.+..   +.+..+...++.+  .......+ ..+....
T Consensus        19 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~   95 (235)
T 2om6_A           19 NIMLDEFSHQLAKISGLHIKDVANAVIEVRNEIKKMRAQASEDPRKVLTGSQEALAGKLKVD--VELVKRAT-ARAILNV   95 (235)
T ss_dssp             HHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHHHHHTCC--HHHHHHHH-HHHHHHC
T ss_pred             chhHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHhhhhcCCCcchHHHHHHHHHHHhCCC--HHHHHHHH-HHHHHhc
Confidence            45677889999999997654332   2221          255544   5666666666654  22222222 2233333


Q ss_pred             cCCCCCchHHHHHHHHHHCCCcEEEEcCCC---hHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCC
Q 017995           67 CKVKALPGANRLIKHLSCHGVPMALASNSH---RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME  143 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~---~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~  143 (362)
                      ....++||+.++|+.|+++|++++++||+.   ...++..+ +.+++.++|+.+++++++..+||+|+.|..+++++|++
T Consensus        96 ~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~  174 (235)
T 2om6_A           96 DESLVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLL-ERFGLMEFIDKTFFADEVLSYKPRKEMFEKVLNSFEVK  174 (235)
T ss_dssp             CGGGBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHH-HHTTCGGGCSEEEEHHHHTCCTTCHHHHHHHHHHTTCC
T ss_pred             cccCcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHH-HhCCcHHHhhhheeccccCCCCCCHHHHHHHHHHcCCC
Confidence            333469999999999999999999999999   88888888 88899999999999999999999999999999999999


Q ss_pred             CCcEEEEecCH-hhHHHHHHcCCEEEEEcCCCCccccccchhHhhcccccc
Q 017995          144 PSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL  193 (362)
Q Consensus       144 p~~~l~igDs~-~d~~aA~~aG~~~i~v~~~~~~~~~~ssa~~vi~~l~el  193 (362)
                      |++|++|||+. +|+.+|+.+|+.++++.++.........++.++.++.++
T Consensus       175 ~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~el  225 (235)
T 2om6_A          175 PEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIPSIANL  225 (235)
T ss_dssp             GGGEEEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEESSGGGH
T ss_pred             ccceEEECCChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchHhhHHHH
Confidence            99999999999 999999999999999987632222222345667776664

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A

Probab=99.80  E-value=4.3e-18  Score=149.71  Aligned_cols=185  Identities=21%  Similarity=0.265  Sum_probs=148.2

Q ss_pred             HHHHHHHHHHHHHHcCCC-CCHHHHHhhcCCCHHHHHHHHHHHhCCCCCHHH---HHHHHHHHHHhhhc---CCCCCchH
Q 017995            3 DGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHE---FVNEVYSMFSDHLC---KVKALPGA   75 (362)
Q Consensus         3 e~~~~~a~~~~l~~~g~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~---~~~~~pgv   75 (362)
                      +..+.+++.++++++|.+ ++........|.+..+.+..+....+.+.+.+.   +...+...+.....   ...++||+
T Consensus        17 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (221)
T 2wf7_A           17 AEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLADKKVSAEEFKELAKRKNDNYVKMIQDVSPADVYPGI   96 (221)
T ss_dssp             HHHHHHHHHHHHHHTTCCCCSHHHHTTTTTCCHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHGGGCCGGGBCTTH
T ss_pred             hHHHHHHHHHHHHHcCCCCCCHHHHHHhCCCCHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHhhccCCCCCCCH
Confidence            456778899999999987 777777888899888888888877775555433   33333344444332   46789999


Q ss_pred             HHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHh
Q 017995           76 NRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVI  155 (362)
Q Consensus        76 ~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~  155 (362)
                      .++|+.|++.|++++++|++  ..++..+ +.+++..+|+.+++++++..+||+|+.|..+++++|++|++|++|||+.+
T Consensus        97 ~~~l~~l~~~g~~~~i~t~~--~~~~~~l-~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~iGD~~n  173 (221)
T 2wf7_A           97 LQLLKDLRSNKIKIALASAS--KNGPFLL-ERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQA  173 (221)
T ss_dssp             HHHHHHHHHTTCEEEECCCC--TTHHHHH-HHTTCGGGCSEECCTTTSSSCTTSSHHHHHHHHHTTCCGGGEEEEESSHH
T ss_pred             HHHHHHHHHCCCeEEEEcCc--HHHHHHH-HHcChHHHcceEeccccCCCCCCChHHHHHHHHHcCCChhHeEEEeCCHH
Confidence            99999999999999999998  4456677 78899999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHcCCEEEEEcCCCCccccccchhHhhccccccc
Q 017995          156 GVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLR  194 (362)
Q Consensus       156 d~~aA~~aG~~~i~v~~~~~~~~~~ssa~~vi~~l~el~  194 (362)
                      |+.+|+.+|+.++++...   .. ...++.++.++.++.
T Consensus       174 Di~~a~~aG~~~~~~~~~---~~-~~~a~~v~~~~~el~  208 (221)
T 2wf7_A          174 GIQAIKDSGALPIGVGRP---ED-LGDDIVIVPDTSHYT  208 (221)
T ss_dssp             HHHHHHHHTCEEEEESCH---HH-HCSSSEEESSGGGCC
T ss_pred             HHHHHHHCCCEEEEECCH---HH-hccccchhcCHHhCC
Confidence            999999999999999541   11 113466666666643

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.80  E-value=2.4e-18  Score=148.98  Aligned_cols=181  Identities=15%  Similarity=0.221  Sum_probs=149.4

Q ss_pred             CHHHHHHHHHHHHHHcCCCCCHHHHHhhcC-CCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhh-cCCCCCchHHHHH
Q 017995            2 TDGMFSEVLKTFLVKYGKEWDGREKHKIVG-KTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHL-CKVKALPGANRLI   79 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~pgv~~~L   79 (362)
                      ++..+.+++.++++++|++.+.+..+...| .+..+.++.+......+   .+....+...+.+.. ....++||+.++|
T Consensus        18 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (207)
T 2go7_A           18 SYEAILSGIEETFAQFSIPYDKEKVREFIFKYSVQDLLVRVAEDRNLD---VEVLNQVRAQSLAEKNAQVVLMPGAREVL   94 (207)
T ss_dssp             CHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHSCHHHHHHHHHHHHTCC---HHHHHHHHHHHHTTCGGGCEECTTHHHHH
T ss_pred             cHHHHHHHHHHHHHHcCCCCCHHHHHHHHccccHHHHHHHhhchhhcc---HHHHHHHHHHHHHhccccceeCcCHHHHH
Confidence            456677889999999999888888888888 88887777665343331   334444555555443 5678999999999


Q ss_pred             HHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHH
Q 017995           80 KHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA  159 (362)
Q Consensus        80 ~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~a  159 (362)
                      +.|+++|++++++|++....+. .+ +.+++.++|+.++++++...+||+|+.+..+++++|++|++|++|||+.+|+.+
T Consensus        95 ~~l~~~g~~~~i~s~~~~~~~~-~~-~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~i~~~~~~~iGD~~nDi~~  172 (207)
T 2go7_A           95 AWADESGIQQFIYTHKGNNAFT-IL-KDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEF  172 (207)
T ss_dssp             HHHHHTTCEEEEECSSCTHHHH-HH-HHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHH
T ss_pred             HHHHHCCCeEEEEeCCchHHHH-HH-HHcCchhheeeEEecCcCCCCCCCcHHHHHHHHHhCCCcccEEEECCCHHHHHH
Confidence            9999999999999999999888 77 788999999999999999999999999999999999999999999999999999


Q ss_pred             HHHcCCEEEEEcCCCCccccccchhHhhcccccc
Q 017995          160 GKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL  193 (362)
Q Consensus       160 A~~aG~~~i~v~~~~~~~~~~ssa~~vi~~l~el  193 (362)
                      |+.+|+.++++.++. .     .++.++.++.++
T Consensus       173 ~~~aG~~~i~~~~~~-~-----~a~~v~~~~~el  200 (207)
T 2go7_A          173 AQNSGIQSINFLEST-Y-----EGNHRIQALADI  200 (207)
T ss_dssp             HHHHTCEEEESSCCS-C-----TTEEECSSTTHH
T ss_pred             HHHCCCeEEEEecCC-C-----CCCEEeCCHHHH
Confidence            999999999998754 2     346666666653

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}

Probab=99.79  E-value=3.8e-18  Score=150.10  Aligned_cols=190  Identities=23%  Similarity=0.281  Sum_probs=148.4

Q ss_pred             CHHHHHHHHHHHHHHcCCC-CCHHHHHhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhh-cCCCCCchHHHHH
Q 017995            2 TDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHL-CKVKALPGANRLI   79 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~pgv~~~L   79 (362)
                      +...+.+++.++++++|.+ .+.+.+....|.+....++.+.... .......+...+...+.... ....++||+.++|
T Consensus        20 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   98 (225)
T 3d6j_A           20 SSRGIVTCFRSVLERHGYTGITDDMIKRTIGKTLEESFSILTGIT-DADQLESFRQEYSKEADIYMNANTILFPDTLPTL   98 (225)
T ss_dssp             CHHHHHHHHHHHHHHTTCCCCCHHHHHTTTTSCHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHHTGGGCEECTTHHHHH
T ss_pred             CHHHHHHHHHHHHHHhCCCCCCHHHHHHHhCCcHHHHHHHHcCCC-CHHHHHHHHHHHHHHHHHhccccCccCcCHHHHH
Confidence            4566778899999999986 5667777888888877766554221 00011233333444444433 4578899999999


Q ss_pred             HHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHH
Q 017995           80 KHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA  159 (362)
Q Consensus        80 ~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~a  159 (362)
                      +.|++.|++++++|+.....++..+ +.+++..+|+.++++++...+||++..+..+++++|++|++|++|||+.+|+.+
T Consensus        99 ~~l~~~g~~~~i~s~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~i~iGD~~nDi~~  177 (225)
T 3d6j_A           99 THLKKQGIRIGIISTKYRFRILSFL-RNHMPDDWFDIIIGGEDVTHHKPDPEGLLLAIDRLKACPEEVLYIGDSTVDAGT  177 (225)
T ss_dssp             HHHHHHTCEEEEECSSCHHHHHHHH-HTSSCTTCCSEEECGGGCSSCTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHH
T ss_pred             HHHHHCCCeEEEEECCCHHHHHHHH-HHcCchhheeeeeehhhcCCCCCChHHHHHHHHHhCCChHHeEEEcCCHHHHHH
Confidence            9999999999999999999888888 888999999999999999999999999999999999999999999999999999


Q ss_pred             HHHcCCEEEEEcCCCCccccc--cchhHhhcccccc
Q 017995          160 GKAAGMEVVAVPSLPKQTHRY--TAADEVINSLLDL  193 (362)
Q Consensus       160 A~~aG~~~i~v~~~~~~~~~~--ssa~~vi~~l~el  193 (362)
                      |+.+|+.++++.++.......  ..++.++.++.++
T Consensus       178 ~~~aG~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el  213 (225)
T 3d6j_A          178 AAAAGVSFTGVTSGMTTAQEFQAYPYDRIISTLGQL  213 (225)
T ss_dssp             HHHHTCEEEEETTSSCCTTGGGGSCCSEEESSGGGG
T ss_pred             HHHCCCeEEEECCCCCChHHHhhcCCCEEECCHHHH
Confidence            999999999998754322221  1256777777665

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A

Probab=99.79  E-value=1.1e-18  Score=159.69  Aligned_cols=132  Identities=12%  Similarity=0.085  Sum_probs=110.5

Q ss_pred             HHHhhhcCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhh---cCCcCCCcEEEeCCCCCCCCCCHHHHHHHH
Q 017995           61 MFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQ---HGWNESFSVIVGSDEVRTGKPSPDIFLEAA  137 (362)
Q Consensus        61 ~~~~~~~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~---~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~  137 (362)
                      .|........++||+.++|+.|+++|++++|+||++...++..+ +.   .|+.++|+.++++ +++ +||+|++|..++
T Consensus       121 ~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l-~~~~~~~l~~~fd~i~~~-~~~-~KP~p~~~~~~~  197 (261)
T 1yns_A          121 AFTAGRMKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLF-GHSTEGDILELVDGHFDT-KIG-HKVESESYRKIA  197 (261)
T ss_dssp             HHHTTSCCBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HTBTTBCCGGGCSEEECG-GGC-CTTCHHHHHHHH
T ss_pred             HHHhCCcccccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHH-HhhcccChHhhccEEEec-CCC-CCCCHHHHHHHH
Confidence            34333356889999999999999999999999999999888877 63   4699999999999 898 999999999999


Q ss_pred             HHcCCCCCcEEEEecCHhhHHHHHHcCCEEEEEcCCCCcc-c-cccchhHhhcccccccc
Q 017995          138 KRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQT-H-RYTAADEVINSLLDLRP  195 (362)
Q Consensus       138 ~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~~~~~~~-~-~~ssa~~vi~~l~el~~  195 (362)
                      +++|++|++|+||||+..|+.+|+++|+.+++|.+..... . ....++.+++++.++.+
T Consensus       198 ~~lg~~p~~~l~VgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~i~~l~el~~  257 (261)
T 1yns_A          198 DSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITSFSELYL  257 (261)
T ss_dssp             HHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESSGGGCBC
T ss_pred             HHhCcCcccEEEEcCCHHHHHHHHHCCCEEEEEeCCCCCcccccccCCCEEECCHHHhCc
Confidence            9999999999999999999999999999999997632221 1 11245677888877643

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}

Probab=99.79  E-value=7.1e-19  Score=153.03  Aligned_cols=127  Identities=19%  Similarity=0.272  Sum_probs=109.7

Q ss_pred             hcCCCCCchHHHHHHHHHHCCCcEEEEcCCCh---HhHHHHHHhhcCCcCCCcEEEeCCCC----CCCCCCHHHHHHHHH
Q 017995           66 LCKVKALPGANRLIKHLSCHGVPMALASNSHR---ATIESKISYQHGWNESFSVIVGSDEV----RTGKPSPDIFLEAAK  138 (362)
Q Consensus        66 ~~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~---~~i~~~L~~~~gl~~~f~~iv~~~d~----~~gKp~p~~~~~~~~  138 (362)
                      +...+++||+.++|+.|+++|++++|+||++.   ..+...+ +.+|+..+|+.++++++.    ..+||+|++|..+++
T Consensus        30 ~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l-~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~  108 (189)
T 3ib6_A           30 YPEVVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVL-TNFGIIDYFDFIYASNSELQPGKMEKPDKTIFDFTLN  108 (189)
T ss_dssp             CTTCCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHH-HHTTCGGGEEEEEECCTTSSTTCCCTTSHHHHHHHHH
T ss_pred             cCCceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHH-HhcCchhheEEEEEccccccccCCCCcCHHHHHHHHH
Confidence            35689999999999999999999999999987   7888888 899999999999999987    788999999999999


Q ss_pred             HcCCCCCcEEEEecC-HhhHHHHHHcCCEEEEEcCCCCcc--cc--ccchhHhhc--ccccc
Q 017995          139 RLNMEPSSSLVIEDS-VIGVVAGKAAGMEVVAVPSLPKQT--HR--YTAADEVIN--SLLDL  193 (362)
Q Consensus       139 ~~~~~p~~~l~igDs-~~d~~aA~~aG~~~i~v~~~~~~~--~~--~ssa~~vi~--~l~el  193 (362)
                      ++|++|++|+||||+ .+|+.+|+++|+.++++.+.....  +.  ...++.++.  ++.++
T Consensus       109 ~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l  170 (189)
T 3ib6_A          109 ALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADV  170 (189)
T ss_dssp             HHTCCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGH
T ss_pred             HcCCCcccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccHHhH
Confidence            999999999999999 699999999999999998754311  11  124567777  66654

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}

Probab=99.79  E-value=9e-19  Score=155.81  Aligned_cols=160  Identities=23%  Similarity=0.244  Sum_probs=132.9

Q ss_pred             HHHHH-HHHHHHcCCCCCHHHHHhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH-h-hhcCCCCCchHHHHHHHH
Q 017995            6 FSEVL-KTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFS-D-HLCKVKALPGANRLIKHL   82 (362)
Q Consensus         6 ~~~a~-~~~l~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~pgv~~~L~~L   82 (362)
                      +..++ .++++++|.+.  ..+....|.+..+.+..+...     ..+.....+...+. . ......++||+.++|+.|
T Consensus        43 ~~~~~~~~~~~~~g~~~--~~~~~~~g~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  115 (231)
T 3kzx_A           43 IDRTTFYQVLDQMGYKN--IDLDSIPNSTIPKYLITLLGK-----RWKEATILYENSLEKSQKSDNFMLNDGAIELLDTL  115 (231)
T ss_dssp             CCHHHHHHHHHHTTCCC--CCCTTSCTTTHHHHHHHHHGG-----GHHHHHHHHHHHHHHCCSCCCCEECTTHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCH--HHHHHHhCccHHHHHHHHhCc-----hHHHHHHHHHHHHhhhcccccceECcCHHHHHHHH
Confidence            44567 88999998765  445566677766666555421     23445555555555 2 235788999999999999


Q ss_pred             HHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCC-cEEEEecCHhhHHHHH
Q 017995           83 SCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS-SSLVIEDSVIGVVAGK  161 (362)
Q Consensus        83 ~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~-~~l~igDs~~d~~aA~  161 (362)
                      +++|++++++||++...++..+ +.+|+..+|+.+++++++..+||+|+.|..+++++|++|+ +|++|||+.+|+.+|+
T Consensus       116 ~~~g~~~~i~T~~~~~~~~~~l-~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~v~vGD~~~Di~~a~  194 (231)
T 3kzx_A          116 KENNITMAIVSNKNGERLRSEI-HHKNLTHYFDSIIGSGDTGTIKPSPEPVLAALTNINIEPSKEVFFIGDSISDIQSAI  194 (231)
T ss_dssp             HHTTCEEEEEEEEEHHHHHHHH-HHTTCGGGCSEEEEETSSSCCTTSSHHHHHHHHHHTCCCSTTEEEEESSHHHHHHHH
T ss_pred             HHCCCeEEEEECCCHHHHHHHH-HHCCchhheeeEEcccccCCCCCChHHHHHHHHHcCCCcccCEEEEcCCHHHHHHHH
Confidence            9999999999999999999888 8899999999999999999999999999999999999999 9999999999999999


Q ss_pred             HcCCEEEEEcCC
Q 017995          162 AAGMEVVAVPSL  173 (362)
Q Consensus       162 ~aG~~~i~v~~~  173 (362)
                      ++|+.++++...
T Consensus       195 ~aG~~~v~~~~~  206 (231)
T 3kzx_A          195 EAGCLPIKYGST  206 (231)
T ss_dssp             HTTCEEEEECC-
T ss_pred             HCCCeEEEECCC
Confidence            999999999664

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13

Probab=99.78  E-value=1.9e-20  Score=180.04  Aligned_cols=188  Identities=16%  Similarity=0.181  Sum_probs=139.6

Q ss_pred             HHHHHHHHHHHHH-cCCCCCHHHHHhhcCCCHHHHHHHHHHHhCCCCCHHHHHH--HHHHHHHhhh---cCCCCCchHHH
Q 017995            4 GMFSEVLKTFLVK-YGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVN--EVYSMFSDHL---CKVKALPGANR   77 (362)
Q Consensus         4 ~~~~~a~~~~l~~-~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~---~~~~~~pgv~~   77 (362)
                      ..+..+|.+..++ +++  +.+......|.+..+..+.+.+.++.+...+++..  .+........   ..++++||+.+
T Consensus       145 d~i~~~l~~~a~~~~~i--~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e  222 (384)
T 1qyi_A          145 NNIYAALEEFATTELHV--SDATLFSLKGALWTLAQEVYQEWYLGSKLYEDVEKKIARTTFKTGYIYQEIILRPVDEVKV  222 (384)
T ss_dssp             HHHHHHHHHHHHHHTTC--SCCGGGSTTCHHHHHHHHHHHHHHHHHHHHHHHHCSCCSCSSCCCTTTTCCBSSCHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCC--CHHHHHHhcCCCHHHHHHHHHHHcCCccCHHHHHhHHHHHHHHHHHHhhccCCCcCcCHHH
Confidence            4566777777664 354  44556778888888887777766543211111100  0000001111   24688999999


Q ss_pred             HHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCc--EEEeCCCCC-----------CCCCCHHHHHHHHHHcC---
Q 017995           78 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS--VIVGSDEVR-----------TGKPSPDIFLEAAKRLN---  141 (362)
Q Consensus        78 ~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~--~iv~~~d~~-----------~gKp~p~~~~~~~~~~~---  141 (362)
                      +|+.|+++|++++|+||++...++..+ +++|+.++|+  .|++++++.           .+||+|++|..++++++   
T Consensus       223 lL~~Lk~~Gi~laIvTn~~~~~~~~~L-~~lgL~~~Fd~~~Ivs~ddv~~~~~~~~~~kp~~KP~P~~~~~a~~~lg~~~  301 (384)
T 1qyi_A          223 LLNDLKGAGFELGIATGRPYTETVVPF-ENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDK  301 (384)
T ss_dssp             HHHHHHHTTCEEEEECSSCHHHHHHHH-HHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHHHHCCCGGG
T ss_pred             HHHHHHhCCCEEEEEeCCcHHHHHHHH-HHcCChHhcCCCEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCcc
Confidence            999999999999999999999999888 8889999999  899988865           48999999999999999   


Q ss_pred             -----------CCCCcEEEEecCHhhHHHHHHcCCEEEEEcCCCCc---ccc--ccchhHhhccccccc
Q 017995          142 -----------MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ---THR--YTAADEVINSLLDLR  194 (362)
Q Consensus       142 -----------~~p~~~l~igDs~~d~~aA~~aG~~~i~v~~~~~~---~~~--~ssa~~vi~~l~el~  194 (362)
                                 ++|++|+||||+..|+++|+++||.+++|.++...   ...  ...++.++.++.++.
T Consensus       302 ~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~~g~~~~~~~~~l~~~~ad~vi~sl~eL~  370 (384)
T 1qyi_A          302 YESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGELR  370 (384)
T ss_dssp             HHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESSGGGHH
T ss_pred             ccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEECCCccccccHHHHhhcCCCEEECCHHHHH
Confidence                       89999999999999999999999999999885421   111  124567778777753

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}

Probab=99.78  E-value=1.8e-18  Score=153.70  Aligned_cols=182  Identities=17%  Similarity=0.205  Sum_probs=141.4

Q ss_pred             HHHHHHHHHHHHHHcCCCCCHHHHHhhcC------------CC----HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhh
Q 017995            3 DGMFSEVLKTFLVKYGKEWDGREKHKIVG------------KT----PLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHL   66 (362)
Q Consensus         3 e~~~~~a~~~~l~~~g~~~~~~~~~~~~g------------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   66 (362)
                      +..+.+++.++++++|.+++.+.+...++            ..    ..+.+..+...++.+...+ .    ...+....
T Consensus        21 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~   95 (240)
T 3smv_A           21 ETGIVNALQPLAKRTGKTFTSDELLEVFGRNESPQQTETPGALYQDILRAVYDRIAKEWGLEPDAA-E----REEFGTSV   95 (240)
T ss_dssp             HHHHHHHTHHHHHHHTCCCCHHHHHHHHHHHHGGGCCSSCCSCHHHHHHHHHHHHHHHTTCCCCHH-H----HHHHHTGG
T ss_pred             chhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhCCCCChhHHHHHHHHHHHHHhCCCCCHH-H----HHHHHHHH
Confidence            45678899999999999988776543322            22    2344555666677765433 2    23444555


Q ss_pred             cCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHH---HHHcCCC
Q 017995           67 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEA---AKRLNME  143 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~---~~~~~~~  143 (362)
                      ....++||+.++|+.|++ |++++++||++...+...+ +.  +..+|+.+++++++..+||+|++|..+   ++++|++
T Consensus        96 ~~~~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l-~~--l~~~fd~i~~~~~~~~~KP~~~~~~~~l~~~~~lgi~  171 (240)
T 3smv_A           96 KNWPAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSN-AK--LGVEFDHIITAQDVGSYKPNPNNFTYMIDALAKAGIE  171 (240)
T ss_dssp             GGCCBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHH-TT--TCSCCSEEEEHHHHTSCTTSHHHHHHHHHHHHHTTCC
T ss_pred             hcCCCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHH-Hh--cCCccCEEEEccccCCCCCCHHHHHHHHHHHHhcCCC
Confidence            678999999999999999 8999999999999888777 54  668999999999999999999999999   8899999


Q ss_pred             CCcEEEEecCH-hhHHHHHHcCCEEEEEcCCCC--------ccccccchhHhhcccccc
Q 017995          144 PSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPK--------QTHRYTAADEVINSLLDL  193 (362)
Q Consensus       144 p~~~l~igDs~-~d~~aA~~aG~~~i~v~~~~~--------~~~~~ssa~~vi~~l~el  193 (362)
                      |++|++|||+. +|+.+|+++|+.++++.....        .......++.++.++.++
T Consensus       172 ~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~~~~el  230 (240)
T 3smv_A          172 KKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNSMGEM  230 (240)
T ss_dssp             GGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEESSHHHH
T ss_pred             chhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeCCHHHH
Confidence            99999999997 999999999999999986411        111123567777777664

>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22

Probab=99.78  E-value=6e-18  Score=154.28  Aligned_cols=163  Identities=10%  Similarity=0.037  Sum_probs=121.6

Q ss_pred             HHHHHHHHHHHHHcCCCCC-HHHHHhhcCCCHHHHHHHHHHHhCCCCCH---HHH-HHHHHHHHHhhhcCCCCCchHHHH
Q 017995            4 GMFSEVLKTFLVKYGKEWD-GREKHKIVGKTPLEEAAIIVEDYGLPCAK---HEF-VNEVYSMFSDHLCKVKALPGANRL   78 (362)
Q Consensus         4 ~~~~~a~~~~l~~~g~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~pgv~~~   78 (362)
                      ..+.+++.+.++.+|.... .+.+..+.|.+..+....+...++.....   +++ ...+...|.......+++||+.++
T Consensus        54 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~  133 (253)
T 2g80_A           54 PYFTNKVPQLVQQDTRDSPVSNILSQFHIDNKEQLQAHILELVAKDVKDPILKQLQGYVWAHGYESGQIKAPVYADAIDF  133 (253)
T ss_dssp             HHHHHHHHHHHHSCCTTSHHHHHHHTTCCCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHTTSCCBCCCHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCcHHHHHHHHHhhhccHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHhCcccCCCCCCHHHH
Confidence            3556677777777886543 23345566777777777776655433221   222 122344454434467899999999


Q ss_pred             HHHHHHCCCcEEEEcCCChHhHHHHHHhhc-----------CCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 017995           79 IKHLSCHGVPMALASNSHRATIESKISYQH-----------GWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS  147 (362)
Q Consensus        79 L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~-----------gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~  147 (362)
                      |+.    |++++|+||++...++..+ +++           ++.++|+.++.+ .+..+||+|++|+.+++++|++|++|
T Consensus       134 L~~----g~~l~i~Tn~~~~~~~~~l-~~~~~g~~~~~~~l~l~~~~~~~f~~-~~~g~KP~p~~~~~a~~~lg~~p~~~  207 (253)
T 2g80_A          134 IKR----KKRVFIYSSGSVKAQKLLF-GYVQDPNAPAHDSLDLNSYIDGYFDI-NTSGKKTETQSYANILRDIGAKASEV  207 (253)
T ss_dssp             HHH----CSCEEEECSSCHHHHHHHH-HSBCCTTCTTSCCBCCGGGCCEEECH-HHHCCTTCHHHHHHHHHHHTCCGGGE
T ss_pred             HHc----CCEEEEEeCCCHHHHHHHH-HhhcccccccccccchHhhcceEEee-eccCCCCCHHHHHHHHHHcCCCcccE
Confidence            998    8999999999999988888 655           477777776654 23126999999999999999999999


Q ss_pred             EEEecCHhhHHHHHHcCCEEEEEcC
Q 017995          148 LVIEDSVIGVVAGKAAGMEVVAVPS  172 (362)
Q Consensus       148 l~igDs~~d~~aA~~aG~~~i~v~~  172 (362)
                      +||||+..|+++|+++||.++++.+
T Consensus       208 l~vgDs~~di~aA~~aG~~~i~v~~  232 (253)
T 2g80_A          208 LFLSDNPLELDAAAGVGIATGLASR  232 (253)
T ss_dssp             EEEESCHHHHHHHHTTTCEEEEECC
T ss_pred             EEEcCCHHHHHHHHHcCCEEEEEcC
Confidence            9999999999999999999999976

>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}

Probab=99.76  E-value=1.1e-17  Score=148.66  Aligned_cols=153  Identities=16%  Similarity=0.258  Sum_probs=125.7

Q ss_pred             HHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhcCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCC
Q 017995           35 LEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF  114 (362)
Q Consensus        35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f  114 (362)
                      .+.+..+....+.+.+.+.. ..+...    +....++||+.++|+.|+++|++++++||++...++..+ +.+|+.++|
T Consensus        69 ~~~~~~~~~~~g~~~~~~~~-~~~~~~----~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~~~l~~~f  142 (233)
T 3umb_A           69 VDALRYACARLNLPLGNHAE-ATLMRE----YACLSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAV-KSAGMSGLF  142 (233)
T ss_dssp             HHHHHHHHHHTTCCCCHHHH-HHHHHH----HHSCEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHH-HTTTCTTTC
T ss_pred             HHHHHHHHHHcCCCCCHHHH-HHHHHH----HhcCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHH-HHCCcHhhc
Confidence            34455566677776554432 223222    246889999999999999999999999999999999888 889999999


Q ss_pred             cEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEEEcCCCCcccc-ccchhHhhcccccc
Q 017995          115 SVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR-YTAADEVINSLLDL  193 (362)
Q Consensus       115 ~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~~~~~~~~~-~ssa~~vi~~l~el  193 (362)
                      +.++++++...+||+|+.|..+++++|++|++|++|||+.+|+.+|+++|+.++++.++...... ...++.++.++.++
T Consensus       143 ~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~~~~~el  222 (233)
T 3umb_A          143 DHVLSVDAVRLYKTAPAAYALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFWINRLGHPPEALDVAPAAAGHDMRDL  222 (233)
T ss_dssp             SEEEEGGGTTCCTTSHHHHTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEESSHHHH
T ss_pred             CEEEEecccCCCCcCHHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEECCHHHH
Confidence            99999999999999999999999999999999999999999999999999999999875432222 23457777777764

>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}

Probab=99.76  E-value=1.5e-17  Score=147.37  Aligned_cols=153  Identities=19%  Similarity=0.245  Sum_probs=126.1

Q ss_pred             HHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhcCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCC
Q 017995           35 LEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF  114 (362)
Q Consensus        35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f  114 (362)
                      .+.+..+...++.+.+.+. ...    +...+....++||+.++|+.|+++|++++++||++...++..+ +.+|+..+|
T Consensus        66 ~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l-~~~~l~~~f  139 (230)
T 3um9_A           66 LDALRYTCGSLGLALDADG-EAH----LCSEYLSLTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVV-GNSGLTNSF  139 (230)
T ss_dssp             HHHHHHHHHHHTCCCCHHH-HHH----HHHHTTSCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-HHHTCGGGC
T ss_pred             HHHHHHHHHHcCCCCCHHH-HHH----HHHHHhcCCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHH-HHCCChhhc
Confidence            4445566667777655433 222    2223367899999999999999999999999999999998888 888999999


Q ss_pred             cEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEEEcCCCCcccc-ccchhHhhcccccc
Q 017995          115 SVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR-YTAADEVINSLLDL  193 (362)
Q Consensus       115 ~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~~~~~~~~~-~ssa~~vi~~l~el  193 (362)
                      +.+++++++..+||+|+.|..+++++|++|++|++|||+.+|+.+|+++|+.++++.++...... ...++.++.++.++
T Consensus       140 ~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el  219 (230)
T 3um9_A          140 DHLISVDEVRLFKPHQKVYELAMDTLHLGESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSDVGVL  219 (230)
T ss_dssp             SEEEEGGGTTCCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEESSHHHH
T ss_pred             ceeEehhhcccCCCChHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeCCHHHH
Confidence            99999999999999999999999999999999999999999999999999999999875332222 23467788887775

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6

Probab=99.75  E-value=1.7e-17  Score=146.76  Aligned_cols=187  Identities=24%  Similarity=0.397  Sum_probs=149.2

Q ss_pred             CHHHHHHHHHHHHHHcCCCCC-HHHHHhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhh-cCCCCCchHHHHH
Q 017995            2 TDGMFSEVLKTFLVKYGKEWD-GREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHL-CKVKALPGANRLI   79 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~pgv~~~L   79 (362)
                      +...+..++.++++++|.+.+ .+....+.|.+..+.+..+...++...... ....+.+.+.+.. ....++||+.++|
T Consensus        18 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l   96 (229)
T 2fdr_A           18 SEIIAAQVESRLLTEAGYPISVEEMGERFAGMTWKNILLQVESEASIPLSAS-LLDKSEKLLDMRLERDVKIIDGVKFAL   96 (229)
T ss_dssp             CHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCCHHHHHHHHHHHHCCCCCTH-HHHHHHHHHHHHHHHHCCBCTTHHHHH
T ss_pred             cHHHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHHHcCCCCCHH-HHHHHHHHHHHHhhcCCccCcCHHHHH
Confidence            456677889999999999887 455678889999998888888877654432 3333444444333 4578899999999


Q ss_pred             HHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCC-cEEEeCCCCCCC--CCCHHHHHHHHHHcCCCCCcEEEEecCHhh
Q 017995           80 KHLSCHGVPMALASNSHRATIESKISYQHGWNESF-SVIVGSDEVRTG--KPSPDIFLEAAKRLNMEPSSSLVIEDSVIG  156 (362)
Q Consensus        80 ~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f-~~iv~~~d~~~g--Kp~p~~~~~~~~~~~~~p~~~l~igDs~~d  156 (362)
                      +.|+.   +++++|+++...++..+ +.+++..+| +.+++++++..+  ||+|..|..+++++|++|++|++|||+.+|
T Consensus        97 ~~l~~---~~~i~s~~~~~~~~~~l-~~~~l~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~l~~~~~~~i~iGD~~~D  172 (229)
T 2fdr_A           97 SRLTT---PRCICSNSSSHRLDMML-TKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHG  172 (229)
T ss_dssp             HHCCS---CEEEEESSCHHHHHHHH-HHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHH
T ss_pred             HHhCC---CEEEEECCChhHHHHHH-HhCChHHhccceEEeccccccCCCCcCHHHHHHHHHHcCCChhHeEEEcCCHHH
Confidence            98874   89999999999888888 888999999 999999998899  999999999999999999999999999999


Q ss_pred             HHHHHHcCCEEEEEcCCCCc----cccc-c-chhHhhcccccc
Q 017995          157 VVAGKAAGMEVVAVPSLPKQ----THRY-T-AADEVINSLLDL  193 (362)
Q Consensus       157 ~~aA~~aG~~~i~v~~~~~~----~~~~-s-sa~~vi~~l~el  193 (362)
                      +.+|+.+|+.++++......    .... . .++.++.++.++
T Consensus       173 i~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el  215 (229)
T 2fdr_A          173 IHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDL  215 (229)
T ss_dssp             HHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGH
T ss_pred             HHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceeecCHHHH
Confidence            99999999999999875431    0011 1 146666666664

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*

Probab=99.75  E-value=3.2e-17  Score=146.82  Aligned_cols=126  Identities=19%  Similarity=0.314  Sum_probs=111.1

Q ss_pred             cCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCc
Q 017995           67 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS  146 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~  146 (362)
                      ....++||+.++|+.|+++|++++++||++...++..+ +.+|+..+|+.+++++++..+||+|+.|..+++++|++|++
T Consensus       102 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~  180 (240)
T 2no4_A          102 KELSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAAL-KASKLDRVLDSCLSADDLKIYKPDPRIYQFACDRLGVNPNE  180 (240)
T ss_dssp             HTCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-HHTTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHHTCCGGG
T ss_pred             hcCCCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-HhcCcHHHcCEEEEccccCCCCCCHHHHHHHHHHcCCCccc
Confidence            45789999999999999999999999999999998888 88999999999999999999999999999999999999999


Q ss_pred             EEEEecCHhhHHHHHHcCCEEEEEcCCCCccccccch-hHhhcccccc
Q 017995          147 SLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAA-DEVINSLLDL  193 (362)
Q Consensus       147 ~l~igDs~~d~~aA~~aG~~~i~v~~~~~~~~~~ssa-~~vi~~l~el  193 (362)
                      |++|||+.+|+.+|+++|+.++++.++.........+ +.+++++.++
T Consensus       181 ~~~iGD~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~el  228 (240)
T 2no4_A          181 VCFVSSNAWDLGGAGKFGFNTVRINRQGNPPEYEFAPLKHQVNSLSEL  228 (240)
T ss_dssp             EEEEESCHHHHHHHHHHTCEEEEECTTCCCCCCTTSCCSEEESSGGGH
T ss_pred             EEEEeCCHHHHHHHHHCCCEEEEECCCCCCCcccCCCCceeeCCHHHH
Confidence            9999999999999999999999998754321112234 6677777664

>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}

Probab=99.75  E-value=2.1e-18  Score=148.21  Aligned_cols=124  Identities=21%  Similarity=0.269  Sum_probs=103.1

Q ss_pred             cCCCCCchHHHHHHHHHHCCCcEEEEcCCCh---------------HhHHHHHHhhcCCcCCCcEEE-----eCCCCCCC
Q 017995           67 CKVKALPGANRLIKHLSCHGVPMALASNSHR---------------ATIESKISYQHGWNESFSVIV-----GSDEVRTG  126 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~---------------~~i~~~L~~~~gl~~~f~~iv-----~~~d~~~g  126 (362)
                      ...+++||+.++|+.|+++|++++|+||++.               ..+...+ +.+|  .+|+.++     +++++..+
T Consensus        24 ~~~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l-~~~g--~~~~~~~~~~~~~~~~~~~~  100 (179)
T 3l8h_A           24 DEWIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRAL-AQMG--GVVDAIFMCPHGPDDGCACR  100 (179)
T ss_dssp             GGCCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHH-HHTT--CCCCEEEEECCCTTSCCSSS
T ss_pred             HHceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHH-HhCC--CceeEEEEcCCCCCCCCCCC
Confidence            4678999999999999999999999999986               5566667 6777  4456555     35788899


Q ss_pred             CCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEEEcCCCCcccc----ccchhHhhcccccc
Q 017995          127 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR----YTAADEVINSLLDL  193 (362)
Q Consensus       127 Kp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~~~~~~~~~----~ssa~~vi~~l~el  193 (362)
                      ||+|++|..+++++|++|++|+||||+.+|+++|+++|+.+++|.++......    ...++.+++++.++
T Consensus       101 KP~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~~~l~el  171 (179)
T 3l8h_A          101 KPLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVCEDLAAV  171 (179)
T ss_dssp             TTSSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEESSHHHH
T ss_pred             CCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEecCHHHH
Confidence            99999999999999999999999999999999999999999999886532222    13457777777764

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A

Probab=99.75  E-value=2.4e-17  Score=146.63  Aligned_cols=150  Identities=15%  Similarity=0.252  Sum_probs=120.5

Q ss_pred             HHHHHHHhCCCCCHHHHHHHHHHHHHhhhcCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEE
Q 017995           38 AAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVI  117 (362)
Q Consensus        38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~i  117 (362)
                      +..+...++.+...+. ..    .+...+....++||+.++|+.|+++|++++++||++...++..+ +.+++..+|+.+
T Consensus        68 ~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~~~l~~~f~~~  141 (232)
T 1zrn_A           68 LRFTCRHLGLDLDART-RS----TLCDAYLRLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVV-SHAGLRDGFDHL  141 (232)
T ss_dssp             HHHHHHHHTCCCCHHH-HH----HHHHGGGGCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-HHTTCGGGCSEE
T ss_pred             HHHHHHHcCCCCCHHH-HH----HHHHHHccCCCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-HhcChHhhhheE
Confidence            3344455565544322 22    22233346789999999999999999999999999999998888 889999999999


Q ss_pred             EeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEEEcCCCCcccc-ccchhHhhcccccc
Q 017995          118 VGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR-YTAADEVINSLLDL  193 (362)
Q Consensus       118 v~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~~~~~~~~~-~ssa~~vi~~l~el  193 (362)
                      ++++++..+||+|+.|..+++++|++|++|++|||+.+|+.+|+++|+.++++.++...... ...++.++.++.++
T Consensus       142 ~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el  218 (232)
T 1zrn_A          142 LSVDPVQVYKPDNRVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAV  218 (232)
T ss_dssp             EESGGGTCCTTSHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESSHHHH
T ss_pred             EEecccCCCCCCHHHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEECCHHHH
Confidence            99999999999999999999999999999999999999999999999999999875322221 23456677777664

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*

Probab=99.74  E-value=1.5e-17  Score=145.58  Aligned_cols=124  Identities=23%  Similarity=0.336  Sum_probs=109.1

Q ss_pred             hcCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCC--cEEEeCCCCCCCCCCHHHHHHHHHHcCCC
Q 017995           66 LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF--SVIVGSDEVRTGKPSPDIFLEAAKRLNME  143 (362)
Q Consensus        66 ~~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f--~~iv~~~d~~~gKp~p~~~~~~~~~~~~~  143 (362)
                      .....++||+.++|+.|+++|++++++|+++...++..+ +.+|+..+|  +.+++++. ..+||+|+.|..+++++|++
T Consensus        66 ~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l-~~~~l~~~f~~~~i~~~~~-~~~kp~~~~~~~~~~~~g~~  143 (205)
T 3m9l_A           66 AQGSRPAPGAVELVRELAGRGYRLGILTRNARELAHVTL-EAIGLADCFAEADVLGRDE-APPKPHPGGLLKLAEAWDVS  143 (205)
T ss_dssp             EEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHTTCGGGSCGGGEECTTT-SCCTTSSHHHHHHHHHTTCC
T ss_pred             hhcCCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHH-HHcCchhhcCcceEEeCCC-CCCCCCHHHHHHHHHHcCCC
Confidence            356789999999999999999999999999999999888 889999999  78887776 78999999999999999999


Q ss_pred             CCcEEEEecCHhhHHHHHHcCCEEEEEcCCCCccccccchhHhhcccccc
Q 017995          144 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL  193 (362)
Q Consensus       144 p~~~l~igDs~~d~~aA~~aG~~~i~v~~~~~~~~~~ssa~~vi~~l~el  193 (362)
                      |++|++|||+.+|+.+|+++|+.++++........  ..++.++.++.++
T Consensus       144 ~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~--~~ad~v~~~~~el  191 (205)
T 3m9l_A          144 PSRMVMVGDYRFDLDCGRAAGTRTVLVNLPDNPWP--ELTDWHARDCAQL  191 (205)
T ss_dssp             GGGEEEEESSHHHHHHHHHHTCEEEECSSSSCSCG--GGCSEECSSHHHH
T ss_pred             HHHEEEECCCHHHHHHHHHcCCEEEEEeCCCCccc--ccCCEEeCCHHHH
Confidence            99999999999999999999999999987543222  2357777777764

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A

Probab=99.74  E-value=2.4e-17  Score=149.90  Aligned_cols=168  Identities=18%  Similarity=0.250  Sum_probs=136.3

Q ss_pred             HHHHHHHHHHHcCCCCCHHHHHhhcCCCHHHHHHHHH----------HHhCCCCCHHH---HHHHHHHHHHhhh-cCCCC
Q 017995            6 FSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIV----------EDYGLPCAKHE---FVNEVYSMFSDHL-CKVKA   71 (362)
Q Consensus         6 ~~~a~~~~l~~~g~~~~~~~~~~~~g~~~~~~~~~~~----------~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~   71 (362)
                      +..++.++++++|++++.+.+....|......+..+.          ..++...+.+.   +...+...+.... ....+
T Consensus        25 ~~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (267)
T 1swv_A           25 PLEVFMEIFHKRGVAITAEEARKPMGLLKIDHVRALTEMPRIASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASP  104 (267)
T ss_dssp             THHHHHHHHHTTTCCCCHHHHHTTTTSCHHHHHHHHHHSHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHGGGGCCB
T ss_pred             HHHHHHHHHHHcCCCCCHHHHHHHhccchHHHHHHhcccHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhhcccccc
Confidence            4678999999999988888888888887666554432          23454444333   2333333333322 46789


Q ss_pred             CchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCC-cEEEeCCCCCCCCCCHHHHHHHHHHcCCCC-CcEEE
Q 017995           72 LPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF-SVIVGSDEVRTGKPSPDIFLEAAKRLNMEP-SSSLV  149 (362)
Q Consensus        72 ~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f-~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p-~~~l~  149 (362)
                      +||+.++|+.|+++|++++++|+.+...++..+ +.+++..+| +.+++++++..+||+|+.+..+++++|++| ++|++
T Consensus       105 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~i~  183 (267)
T 1swv_A          105 INGVKEVIASLRERGIKIGSTTGYTREMMDIVA-KEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIK  183 (267)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHH-HHHHHTTCCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCSGGGEEE
T ss_pred             CccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHH-HHcCCcccChHheecCCccCCCCCCHHHHHHHHHHhCCCCCcCEEE
Confidence            999999999999999999999999998888888 777888875 899999999999999999999999999999 99999


Q ss_pred             EecCHhhHHHHHHcCCEEEEEcCCC
Q 017995          150 IEDSVIGVVAGKAAGMEVVAVPSLP  174 (362)
Q Consensus       150 igDs~~d~~aA~~aG~~~i~v~~~~  174 (362)
                      |||+.+|+.+|+.+|+.+++|..+.
T Consensus       184 iGD~~nDi~~a~~aG~~~i~v~~~~  208 (267)
T 1swv_A          184 VGDTVSDMKEGRNAGMWTVGVILGS  208 (267)
T ss_dssp             EESSHHHHHHHHHTTSEEEEECTTC
T ss_pred             EeCCHHHHHHHHHCCCEEEEEcCCC
Confidence            9999999999999999999998864

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}

Probab=99.74  E-value=2.6e-17  Score=151.25  Aligned_cols=188  Identities=20%  Similarity=0.306  Sum_probs=145.6

Q ss_pred             CHHHHHHHHHHHHHHcCCCCCHHH-HHhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhh-cCCCCCchHHHHH
Q 017995            2 TDGMFSEVLKTFLVKYGKEWDGRE-KHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHL-CKVKALPGANRLI   79 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~pgv~~~L   79 (362)
                      |+..+.+++.++++++|. .+.+. .....|.+..+.++.+.....   . .+....+...+.... ....++||+.++|
T Consensus        49 s~~~~~~~~~~~~~~~g~-~~~~~~~~~~~G~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~L  123 (275)
T 2qlt_A           49 SQPAIAAFWRDFGKDKPY-FDAEHVIHISHGWRTYDAIAKFAPDFA---D-EEYVNKLEGEIPEKYGEHSIEVPGAVKLC  123 (275)
T ss_dssp             CHHHHHHHHHHHHTTCTT-CCHHHHHHHCTTCCHHHHHHHHCGGGC---C-HHHHHHHHHTHHHHHCTTCEECTTHHHHH
T ss_pred             CHHHHHHHHHHHHHHcCC-CCHHHHHHHhcCCCHHHHHHHHhccCC---c-HHHHHHHHHHHHHHHhcCCCcCcCHHHHH
Confidence            456778899999999884 44443 456678887776666543211   2 233334444444333 5678999999999


Q ss_pred             HHHHHC-CCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCC-------CCCcEEEEe
Q 017995           80 KHLSCH-GVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM-------EPSSSLVIE  151 (362)
Q Consensus        80 ~~L~~~-g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~-------~p~~~l~ig  151 (362)
                      +.|+++ |++++++|++....++..+ +.+++. .|+.+++++++..+||+|+.|..+++++|+       +|++|++||
T Consensus       124 ~~l~~~~g~~l~i~T~~~~~~~~~~l-~~~~l~-~f~~i~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~~~~~~i~~G  201 (275)
T 2qlt_A          124 NALNALPKEKWAVATSGTRDMAKKWF-DILKIK-RPEYFITANDVKQGKPHPEPYLKGRNGLGFPINEQDPSKSKVVVFE  201 (275)
T ss_dssp             HHHHTSCGGGEEEECSSCHHHHHHHH-HHHTCC-CCSSEECGGGCSSCTTSSHHHHHHHHHTTCCCCSSCGGGSCEEEEE
T ss_pred             HHHHhccCCeEEEEeCCCHHHHHHHH-HHcCCC-ccCEEEEcccCCCCCCChHHHHHHHHHcCCCccccCCCcceEEEEe
Confidence            999999 9999999999999988888 778886 489999999999999999999999999999       999999999


Q ss_pred             cCHhhHHHHHHcCCEEEEEcCCCCcccc-ccchhHhhccccccccc
Q 017995          152 DSVIGVVAGKAAGMEVVAVPSLPKQTHR-YTAADEVINSLLDLRPE  196 (362)
Q Consensus       152 Ds~~d~~aA~~aG~~~i~v~~~~~~~~~-~ssa~~vi~~l~el~~~  196 (362)
                      |+.+|+.+|+++|+.+++|.++...... ...++.++.++.++...
T Consensus       202 Ds~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~~~~el~~~  247 (275)
T 2qlt_A          202 DAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKNHESIRVG  247 (275)
T ss_dssp             SSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEESSGGGEEEC
T ss_pred             CCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHcChh
Confidence            9999999999999999999885432221 12367788888776543

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A

Probab=99.74  E-value=1.4e-17  Score=148.32  Aligned_cols=159  Identities=19%  Similarity=0.168  Sum_probs=127.2

Q ss_pred             HHHHHHHHHcCCCCCHHHHHhhc----------C-CCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhcCCCCCchHH
Q 017995            8 EVLKTFLVKYGKEWDGREKHKIV----------G-KTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGAN   76 (362)
Q Consensus         8 ~a~~~~l~~~g~~~~~~~~~~~~----------g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~   76 (362)
                      .++.+.++++|++...+....+.          | .+..+....+...++.+.+.+++.+.    +....  ..++||+.
T Consensus        45 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~--~~~~~~~~  118 (229)
T 4dcc_A           45 ERCIENFKKIGFQNIEEKFCTHQLDGIFLQQEKGLITPAEFRDGIREMMGKMVSDKQIDAA----WNSFL--VDIPTYKL  118 (229)
T ss_dssp             HHHHHHHHHHTCTTHHHHHHHTHHHHHHHHHHTTCSCHHHHHHHHHHHHTSCCCHHHHHHH----HHTTB--CCCCHHHH
T ss_pred             HHHHHHHHHhCCCcHHHHHHHhcCcHHHHHHHCCCCCHHHHHHHHHHHhCCCCCHHHHHHH----HHHHH--HhccHHHH
Confidence            45567778888875544443322          3 46677777777777777666555433    23222  35779999


Q ss_pred             HHHHHHHHCCCcEEEEcCCChHhHHHHHH-----hhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEe
Q 017995           77 RLIKHLSCHGVPMALASNSHRATIESKIS-----YQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIE  151 (362)
Q Consensus        77 ~~L~~L~~~g~~~~i~S~~~~~~i~~~L~-----~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~ig  151 (362)
                      ++|+.|+++ ++++|+||++...++..+.     +.+++.++|+.++++++++.+||+|++|..+++++|++|++|++||
T Consensus       119 ~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~g~~~~~~~~vG  197 (229)
T 4dcc_A          119 DLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKTYLSYEMKMAKPEPEIFKAVTEDAGIDPKETFFID  197 (229)
T ss_dssp             HHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGGEEEEC
T ss_pred             HHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCEEEeecccCCCCCCHHHHHHHHHHcCCCHHHeEEEC
Confidence            999999998 9999999999998875541     4568888999999999999999999999999999999999999999


Q ss_pred             cCHhhHHHHHHcCCEEEEEcCC
Q 017995          152 DSVIGVVAGKAAGMEVVAVPSL  173 (362)
Q Consensus       152 Ds~~d~~aA~~aG~~~i~v~~~  173 (362)
                      |+.+|+.+|+++|+.++++.+.
T Consensus       198 D~~~Di~~a~~aG~~~i~v~~~  219 (229)
T 4dcc_A          198 DSEINCKVAQELGISTYTPKAG  219 (229)
T ss_dssp             SCHHHHHHHHHTTCEEECCCTT
T ss_pred             CCHHHHHHHHHcCCEEEEECCH
Confidence            9999999999999999999874

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.73  E-value=1.2e-16  Score=141.04  Aligned_cols=184  Identities=18%  Similarity=0.174  Sum_probs=130.9

Q ss_pred             HHHHHHHHHHHHHHcCCCCCHHHH-----------HhhcCCCHHHH----HHHHHHHhCCCCCHHHHHHHHHHHHHhhh-
Q 017995            3 DGMFSEVLKTFLVKYGKEWDGREK-----------HKIVGKTPLEE----AAIIVEDYGLPCAKHEFVNEVYSMFSDHL-   66 (362)
Q Consensus         3 e~~~~~a~~~~l~~~g~~~~~~~~-----------~~~~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-   66 (362)
                      +..+..++.++++.+...-....+           ..+.|.+....    ........+...+.+.+ ..+.+.+.+.. 
T Consensus        23 ~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  101 (234)
T 3ddh_A           23 EPFFQEVEKQYTDLLKPYGTSKEISAALFQTEMNNLQILGYGAKAFTISMVETALQISNGKIAADII-RQIVDLGKSLLK  101 (234)
T ss_dssp             HHHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHTHHHHCSSHHHHHHHHHHHHHHHTTTCCCHHHH-HHHHHHHHHHTT
T ss_pred             cchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhhhhcCCcchhHHHHHHHHHHHhcCCCCHHHH-HHHHHHHHHHhh
Confidence            455566666555443321132222           24556665543    33333444555554433 33444444443 


Q ss_pred             cCCCCCchHHHHHHHHHHCC-CcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 017995           67 CKVKALPGANRLIKHLSCHG-VPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS  145 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g-~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~  145 (362)
                      ....++||+.++|+.|+++| ++++++||++...+...+ +.+++.++|+.++++     +||+|+.|..+++++|++|+
T Consensus       102 ~~~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l-~~~~~~~~f~~~~~~-----~kpk~~~~~~~~~~lgi~~~  175 (234)
T 3ddh_A          102 MPIELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKL-ERSGLSPYFDHIEVM-----SDKTEKEYLRLLSILQIAPS  175 (234)
T ss_dssp             CCCCBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHH-HHHTCGGGCSEEEEE-----SCCSHHHHHHHHHHHTCCGG
T ss_pred             ccCCcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHH-HHhCcHhhhheeeec-----CCCCHHHHHHHHHHhCCCcc
Confidence            57899999999999999999 999999999999888888 888999999998864     58999999999999999999


Q ss_pred             cEEEEecCH-hhHHHHHHcCCEEEEEcCCCC----ccc-cccchhHhhcccccc
Q 017995          146 SSLVIEDSV-IGVVAGKAAGMEVVAVPSLPK----QTH-RYTAADEVINSLLDL  193 (362)
Q Consensus       146 ~~l~igDs~-~d~~aA~~aG~~~i~v~~~~~----~~~-~~ssa~~vi~~l~el  193 (362)
                      +|++|||+. +|+.+|+++|+.+++|..+..    ... ....++.+++++.++
T Consensus       176 ~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~~l~el  229 (234)
T 3ddh_A          176 ELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVKRLDDL  229 (234)
T ss_dssp             GEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECSSGGGH
T ss_pred             eEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceecccHHHH
Confidence            999999997 999999999999999955321    111 122236777777764

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A

Probab=99.73  E-value=4.3e-18  Score=151.23  Aligned_cols=125  Identities=18%  Similarity=0.237  Sum_probs=111.2

Q ss_pred             cCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCc
Q 017995           67 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS  146 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~  146 (362)
                      ....++||+.++|+.|+++ ++++++||++...++..+ +.+|+.++|+.+++++++..+||+|+.|..+++++|++|++
T Consensus        97 ~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l-~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~  174 (234)
T 3u26_A           97 RYGELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFL-DALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEE  174 (234)
T ss_dssp             HHCCBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHH-HHTTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGG
T ss_pred             hhCCcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHH-HHcCcHHHcceeEeccccCCCCcCHHHHHHHHHHcCCCchh
Confidence            4578999999999999999 999999999999988888 88999999999999999999999999999999999999999


Q ss_pred             EEEEecCH-hhHHHHHHcCCEEEEEcCCCCccccccchhHhhcccccc
Q 017995          147 SLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL  193 (362)
Q Consensus       147 ~l~igDs~-~d~~aA~~aG~~~i~v~~~~~~~~~~ssa~~vi~~l~el  193 (362)
                      |++|||+. +|+.+|+++|+.+++|..+.........++.++.++.++
T Consensus       175 ~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~a~~~~~~~~el  222 (234)
T 3u26_A          175 AVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREV  222 (234)
T ss_dssp             EEEEESCTTTTHHHHHTTTCEEEEECSSSTTGGGGGGCSEEESSTHHH
T ss_pred             EEEEcCCcHHHHHHHHHcCCEEEEECCCCCccccccCCCEeeCCHHHH
Confidence            99999998 999999999999999988643333333567777777764

>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}

Probab=99.73  E-value=7.8e-18  Score=147.63  Aligned_cols=101  Identities=21%  Similarity=0.264  Sum_probs=91.5

Q ss_pred             CCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCC-Cc
Q 017995           68 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP-SS  146 (362)
Q Consensus        68 ~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p-~~  146 (362)
                      ..+++||+.++|+.|+++|++++|+|++++..+...+    +  .+|+.+++++++..+||+|++|..+++++++.| ++
T Consensus        34 ~~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~----~--~~~d~v~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~  107 (196)
T 2oda_A           34 HAQLTPGAQNALKALRDQGMPCAWIDELPEALSTPLA----A--PVNDWMIAAPRPTAGWPQPDACWMALMALNVSQLEG  107 (196)
T ss_dssp             GGSBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHH----T--TTTTTCEECCCCSSCTTSTHHHHHHHHHTTCSCSTT
T ss_pred             cCCcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhc----C--ccCCEEEECCcCCCCCCChHHHHHHHHHcCCCCCcc
Confidence            4688999999999999999999999999998774333    3  467999999999999999999999999999976 89


Q ss_pred             EEEEecCHhhHHHHHHcCCEEEEEcCCC
Q 017995          147 SLVIEDSVIGVVAGKAAGMEVVAVPSLP  174 (362)
Q Consensus       147 ~l~igDs~~d~~aA~~aG~~~i~v~~~~  174 (362)
                      |+||||+.+|+++|+++|+.+|+|.++.
T Consensus       108 ~v~VGDs~~Di~aA~~aG~~~i~v~~g~  135 (196)
T 2oda_A          108 CVLISGDPRLLQSGLNAGLWTIGLASCG  135 (196)
T ss_dssp             CEEEESCHHHHHHHHHHTCEEEEESSSS
T ss_pred             EEEEeCCHHHHHHHHHCCCEEEEEccCC
Confidence            9999999999999999999999998854

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3

Probab=99.73  E-value=7.2e-17  Score=138.87  Aligned_cols=159  Identities=21%  Similarity=0.224  Sum_probs=125.8

Q ss_pred             HHHHHHHHHHHHHHcCCCCCHHHHHhhc-CCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhcCCCCCchHHHHHHH
Q 017995            3 DGMFSEVLKTFLVKYGKEWDGREKHKIV-GKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKH   81 (362)
Q Consensus         3 e~~~~~a~~~~l~~~g~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~~~L~~   81 (362)
                      +..+.+++.++++++|.+++.+...... +......    ....+..   ..+...+...+........++||+.++|+.
T Consensus        21 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~----~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   93 (190)
T 2fi1_A           21 YETSTAAFVETLALYGITQDHDSVYQALKVSTPFAI----ETFAPNL---ENFLEKYKENEARELEHPILFEGVSDLLED   93 (190)
T ss_dssp             HHHHHHHHHHHHHHTTCCCCHHHHHHHHHHCHHHHH----HHHCTTC---TTHHHHHHHHHHHHTTSCCBCTTHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCCHHHHHHHHccccHHHH----HHHhhhH---HHHHHHHHHHHHHhcCcCccCcCHHHHHHH
Confidence            5667889999999999988877665444 3333222    2222211   122334444444444444599999999999


Q ss_pred             HHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHH
Q 017995           82 LSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGK  161 (362)
Q Consensus        82 L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~  161 (362)
                      |+++|++++++|+.+. .++..+ +.+++.++|+.+++++++..+||+|+.+..+++++|++  +|++|||+.+|+.+|+
T Consensus        94 l~~~g~~~~i~t~~~~-~~~~~l-~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~--~~~~iGD~~~Di~~a~  169 (190)
T 2fi1_A           94 ISNQGGRHFLVSHRND-QVLEIL-EKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQIS--SGLVIGDRPIDIEAGQ  169 (190)
T ss_dssp             HHHTTCEEEEECSSCT-HHHHHH-HHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTCS--SEEEEESSHHHHHHHH
T ss_pred             HHHCCCcEEEEECCcH-HHHHHH-HHcCCHhheeeeeeccccCCCCCCHHHHHHHHHHcCCC--eEEEEcCCHHHHHHHH
Confidence            9999999999999875 567777 88899999999999999999999999999999999998  9999999999999999


Q ss_pred             HcCCEEEEEcC
Q 017995          162 AAGMEVVAVPS  172 (362)
Q Consensus       162 ~aG~~~i~v~~  172 (362)
                      .+|+.++++.+
T Consensus       170 ~aG~~~~~~~~  180 (190)
T 2fi1_A          170 AAGLDTHLFTS  180 (190)
T ss_dssp             HTTCEEEECSC
T ss_pred             HcCCeEEEECC
Confidence            99999999876

>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}

Probab=99.73  E-value=4.9e-17  Score=145.84  Aligned_cols=182  Identities=17%  Similarity=0.224  Sum_probs=137.6

Q ss_pred             HHHHHHHHHHHHHHcCCCCCHHHH-HhhcCCC--------------------HHHHHHHHHHHhCC---CCCHHHHHHHH
Q 017995            3 DGMFSEVLKTFLVKYGKEWDGREK-HKIVGKT--------------------PLEEAAIIVEDYGL---PCAKHEFVNEV   58 (362)
Q Consensus         3 e~~~~~a~~~~l~~~g~~~~~~~~-~~~~g~~--------------------~~~~~~~~~~~~~~---~~~~~~~~~~~   58 (362)
                      ...+.+++.++++++|.+.+.+.. ..+.+..                    ..+.+..+...++.   ....+.     
T Consensus        30 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  104 (254)
T 3umg_A           30 RTGIATAVADYAARHQLEVDAVAFADRWRARYQPSMDAILSGAREFVTLDILHRENLDFVLRESGIDPTNHDSGE-----  104 (254)
T ss_dssp             HHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTHHHHHHHHHTTSSCCCCHHHHHHHHHHHHHHHTTCCGGGSCHHH-----
T ss_pred             chHHHHHHHHHHHHhcCCCCHHHHHHHHHHhHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhCCCcCcCCHHH-----
Confidence            456778999999999998876543 3444421                    12233344444454   222221     


Q ss_pred             HHHHHhhhcCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHH
Q 017995           59 YSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAK  138 (362)
Q Consensus        59 ~~~~~~~~~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~  138 (362)
                      ...+...+....++||+.++|+.|++. ++++++||.+...++..+ +.+|+.  |+.+++++++..+||+|..|..+++
T Consensus       105 ~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l-~~~~~~--f~~~~~~~~~~~~kp~~~~~~~~~~  180 (254)
T 3umg_A          105 LDELARAWHVLTPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMA-KNAGIP--WDVIIGSDINRKYKPDPQAYLRTAQ  180 (254)
T ss_dssp             HHHHHGGGGSCCBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHH-HHHTCC--CSCCCCHHHHTCCTTSHHHHHHHHH
T ss_pred             HHHHHHHHhhCcCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHH-HhCCCC--eeEEEEcCcCCCCCCCHHHHHHHHH
Confidence            122333446788999999999999997 999999999999988888 788885  8999999999999999999999999


Q ss_pred             HcCCCCCcEEEEecCHhhHHHHHHcCCEEEEEcC----CCCccc---cccchhHhhcccccc
Q 017995          139 RLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS----LPKQTH---RYTAADEVINSLLDL  193 (362)
Q Consensus       139 ~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~~----~~~~~~---~~ssa~~vi~~l~el  193 (362)
                      ++|++|++|++|||+.+|+.+|+++|+.++++..    +.....   ....++.++.++.++
T Consensus       181 ~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~~el  242 (254)
T 3umg_A          181 VLGLHPGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISATDITDL  242 (254)
T ss_dssp             HTTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEESSHHHH
T ss_pred             HcCCChHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEECCHHHH
Confidence            9999999999999999999999999999999983    321111   123567778887775

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}

Probab=99.72  E-value=2e-18  Score=153.23  Aligned_cols=163  Identities=17%  Similarity=0.204  Sum_probs=115.1

Q ss_pred             HHHHHHHHHHHHHcCCCCCHHHH-Hh---hcCCCH--HH------HHHHHHHHhCCCCCHHHHHHHHHHHHHhhhcCCCC
Q 017995            4 GMFSEVLKTFLVKYGKEWDGREK-HK---IVGKTP--LE------EAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKA   71 (362)
Q Consensus         4 ~~~~~a~~~~l~~~g~~~~~~~~-~~---~~g~~~--~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (362)
                      ..+..+++++++++|++.+.+.+ ..   ..|...  ..      .+..+...++.+.. +++...+.+.+. .....++
T Consensus        19 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~   96 (220)
T 2zg6_A           19 PVFYEKVYQVLKDNGYDLDLRKVFRAYAKAMGMINYPDEDGLEHVDPKDFLYILGIYPS-ERLVKELKEADI-RDGEAFL   96 (220)
T ss_dssp             ETTHHHHHHHHHHTTCCCCHHHHHHHHHHHGGGCCC-----CCCCCHHHHHHHHTCCCC-HHHHHHHHHTTT-TCEEEEE
T ss_pred             ccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhhhccCCCccccccccHHHHHHHcCCCCc-HHHHHHHHHHhh-cccCceE
Confidence            34567899999999998876554 22   233221  00      03455556666543 333333333221 1135689


Q ss_pred             CchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEe
Q 017995           72 LPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIE  151 (362)
Q Consensus        72 ~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~ig  151 (362)
                      +||+.++|+.|+++|++++++||++.. ++..+ +.+|+.++|+.+++++++..+||+|++|..+++++|++|   +|||
T Consensus        97 ~~~~~~~l~~l~~~g~~~~i~Tn~~~~-~~~~l-~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~---~~vg  171 (220)
T 2zg6_A           97 YDDTLEFLEGLKSNGYKLALVSNASPR-VKTLL-EKFDLKKYFDALALSYEIKAVKPNPKIFGFALAKVGYPA---VHVG  171 (220)
T ss_dssp             CTTHHHHHHHHHTTTCEEEECCSCHHH-HHHHH-HHHTCGGGCSEEC-----------CCHHHHHHHHHCSSE---EEEE
T ss_pred             CcCHHHHHHHHHHCCCEEEEEeCCcHH-HHHHH-HhcCcHhHeeEEEeccccCCCCCCHHHHHHHHHHcCCCe---EEEc
Confidence            999999999999999999999999875 67777 889999999999999999999999999999999999998   9999


Q ss_pred             cCHh-hHHHHHHcCCEEEEEcCC
Q 017995          152 DSVI-GVVAGKAAGMEVVAVPSL  173 (362)
Q Consensus       152 Ds~~-d~~aA~~aG~~~i~v~~~  173 (362)
                      |+.. |+.+|+++|+.++++.+.
T Consensus       172 D~~~~Di~~a~~aG~~~i~v~~~  194 (220)
T 2zg6_A          172 DIYELDYIGAKRSYVDPILLDRY  194 (220)
T ss_dssp             SSCCCCCCCSSSCSEEEEEBCTT
T ss_pred             CCchHhHHHHHHCCCeEEEECCC
Confidence            9998 999999999999999764

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}

Probab=99.72  E-value=4.7e-17  Score=141.52  Aligned_cols=104  Identities=21%  Similarity=0.287  Sum_probs=98.5

Q ss_pred             CCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 017995           68 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS  147 (362)
Q Consensus        68 ~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~  147 (362)
                      ...++||+.++|+.|+++| +++++||++...++..+ +.+|+.++|+.+++++++..+||+|+.|..+++++|++|++|
T Consensus        84 ~~~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l-~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~  161 (200)
T 3cnh_A           84 QSQPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRI-RTFGLGEFLLAFFTSSALGVMKPNPAMYRLGLTLAQVRPEEA  161 (200)
T ss_dssp             TCCBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHH-HHHTGGGTCSCEEEHHHHSCCTTCHHHHHHHHHHHTCCGGGE
T ss_pred             cCccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHH-HhCCHHHhcceEEeecccCCCCCCHHHHHHHHHHcCCCHHHe
Confidence            4569999999999999999 99999999999998888 888999999999999999999999999999999999999999


Q ss_pred             EEEecCHhhHHHHHHcCCEEEEEcCC
Q 017995          148 LVIEDSVIGVVAGKAAGMEVVAVPSL  173 (362)
Q Consensus       148 l~igDs~~d~~aA~~aG~~~i~v~~~  173 (362)
                      ++|||+.+|+.+|+++|+.++++.++
T Consensus       162 ~~vgD~~~Di~~a~~aG~~~~~~~~~  187 (200)
T 3cnh_A          162 VMVDDRLQNVQAARAVGMHAVQCVDA  187 (200)
T ss_dssp             EEEESCHHHHHHHHHTTCEEEECSCH
T ss_pred             EEeCCCHHHHHHHHHCCCEEEEECCc
Confidence            99999999999999999999999763

>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}

Probab=99.72  E-value=5.7e-17  Score=145.89  Aligned_cols=182  Identities=16%  Similarity=0.250  Sum_probs=137.1

Q ss_pred             HHHHHHHHHHHHHHcCCCCCHHHH-HhhcCCC--------------------HHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 017995            3 DGMFSEVLKTFLVKYGKEWDGREK-HKIVGKT--------------------PLEEAAIIVEDYGLPCAKHEFVNEVYSM   61 (362)
Q Consensus         3 e~~~~~a~~~~l~~~g~~~~~~~~-~~~~g~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~   61 (362)
                      +..+..++.++++++|.+.+.+.. ..+.+..                    ..+.+..+...++........     ..
T Consensus        37 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~  111 (254)
T 3umc_A           37 RSSLIEQFQALERELGGTLPCVELTDRWRQQYKPAMDRVRNGQAPWQHLDQLHRQSLEALAGEFGLALDEALL-----QR  111 (254)
T ss_dssp             HHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHTHHHHHHHHTTSSCCCCHHHHHHHHHHHHHHHTTCCCCHHHH-----HH
T ss_pred             CccHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHHHHHHHHhCCCCCHHHH-----HH
Confidence            456778999999999998776543 3332211                    122233444445554333221     22


Q ss_pred             HHhhhcCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcC
Q 017995           62 FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN  141 (362)
Q Consensus        62 ~~~~~~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~  141 (362)
                      +...+....++||+.++|+.|++. ++++++||.+...++..+ +.+|+.  |+.+++++++..+||+|+.|..+++++|
T Consensus       112 ~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l-~~~g~~--f~~~~~~~~~~~~kp~~~~~~~~~~~lg  187 (254)
T 3umc_A          112 ITGFWHRLRPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVA-RHAGLP--WDMLLCADLFGHYKPDPQVYLGACRLLD  187 (254)
T ss_dssp             HHGGGGSCEECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHH-HHHTCC--CSEECCHHHHTCCTTSHHHHHHHHHHHT
T ss_pred             HHHHHhcCCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHH-HHcCCC--cceEEeecccccCCCCHHHHHHHHHHcC
Confidence            333445678999999999999986 999999999999988888 788885  8999999999999999999999999999


Q ss_pred             CCCCcEEEEecCHhhHHHHHHcCCEEEEEcC----CCCcccc---ccchhHhhcccccc
Q 017995          142 MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS----LPKQTHR---YTAADEVINSLLDL  193 (362)
Q Consensus       142 ~~p~~~l~igDs~~d~~aA~~aG~~~i~v~~----~~~~~~~---~ssa~~vi~~l~el  193 (362)
                      ++|++|++|||+.+|+.+|+.+|+.++++..    +......   ...++.++.++.++
T Consensus       188 i~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~~l~el  246 (254)
T 3umc_A          188 LPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIASDLLDL  246 (254)
T ss_dssp             CCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEESSHHHH
T ss_pred             CChHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEECCHHHH
Confidence            9999999999999999999999999999983    3211111   23467788877765

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}

Probab=99.71  E-value=3.8e-17  Score=143.18  Aligned_cols=155  Identities=16%  Similarity=0.127  Sum_probs=118.3

Q ss_pred             HHHHHHcCCCCCHHHHHhhcCCC-----------HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhcCCCCCchHHHHH
Q 017995           11 KTFLVKYGKEWDGREKHKIVGKT-----------PLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLI   79 (362)
Q Consensus        11 ~~~l~~~g~~~~~~~~~~~~g~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~~~L   79 (362)
                      ..+++++|.+.+.+....+.+.+           ..+....+...++...+.+++..    .+..  ....++||+.++|
T Consensus        25 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~--~~~~~~~~~~~~l   98 (211)
T 2i6x_A           25 IRRFKAIGVADIEEMLDPYLQKGLFLDLESGRKSEEEFRTELSRYIGKELTYQQVYD----ALLG--FLEEISAEKFDYI   98 (211)
T ss_dssp             HHHHHHTTCTTHHHHTCC---CCHHHHHHHSSSCHHHHHHHHHHHHTSCCCHHHHHH----HHGG--GEEEECHHHHHHH
T ss_pred             HHHHHHhCCchHHHHHHHHhCchHHHHHHcCCCCHHHHHHHHHHHhCCCCCHHHHHH----HHHH--hhcccChHHHHHH
Confidence            56677788766544444444333           33334444444443333322211    1111  1357899999999


Q ss_pred             HHHHHCCCcEEEEcCCChHhHHHHHHhh------cCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecC
Q 017995           80 KHLSCHGVPMALASNSHRATIESKISYQ------HGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDS  153 (362)
Q Consensus        80 ~~L~~~g~~~~i~S~~~~~~i~~~L~~~------~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs  153 (362)
                      +.|++ |++++++||++...++..+ +.      +++..+|+.+++++++..+||+|+.|..+++++|++|++|++|||+
T Consensus        99 ~~l~~-g~~~~i~t~~~~~~~~~~~-~~l~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~igD~  176 (211)
T 2i6x_A           99 DSLRP-DYRLFLLSNTNPYVLDLAM-SPRFLPSGRTLDSFFDKVYASCQMGKYKPNEDIFLEMIADSGMKPEETLFIDDG  176 (211)
T ss_dssp             HHHTT-TSEEEEEECCCHHHHHHHT-STTSSTTCCCGGGGSSEEEEHHHHTCCTTSHHHHHHHHHHHCCCGGGEEEECSC
T ss_pred             HHHHc-CCeEEEEeCCCHHHHHHHH-hhhccccccCHHHHcCeEEeecccCCCCCCHHHHHHHHHHhCCChHHeEEeCCC
Confidence            99999 9999999999999888777 76      7999999999999999999999999999999999999999999999


Q ss_pred             HhhHHHHHHcCCEEEEEcCC
Q 017995          154 VIGVVAGKAAGMEVVAVPSL  173 (362)
Q Consensus       154 ~~d~~aA~~aG~~~i~v~~~  173 (362)
                      .+|+.+|+++|+.++++.+.
T Consensus       177 ~~Di~~a~~aG~~~~~~~~~  196 (211)
T 2i6x_A          177 PANVATAERLGFHTYCPDNG  196 (211)
T ss_dssp             HHHHHHHHHTTCEEECCCTT
T ss_pred             HHHHHHHHHcCCEEEEECCH
Confidence            99999999999999998774

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}

Probab=99.71  E-value=8.7e-18  Score=137.19  Aligned_cols=104  Identities=19%  Similarity=0.205  Sum_probs=98.1

Q ss_pred             CCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 017995           68 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS  147 (362)
Q Consensus        68 ~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~  147 (362)
                      ...++||+.++|+.|+++|++++++||++...++..+ +.+++..+|+.++++++...+||+|+.|..++++++++|++|
T Consensus        16 ~~~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l-~~~~l~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~   94 (137)
T 2pr7_A           16 TDEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPI-RELETNGVVDKVLLSGELGVEKPEEAAFQAAADAIDLPMRDC   94 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHH-HHHHHTTSSSEEEEHHHHSCCTTSHHHHHHHHHHTTCCGGGE
T ss_pred             CCccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-HHCChHhhccEEEEeccCCCCCCCHHHHHHHHHHcCCCcccE
Confidence            3567899999999999999999999999999888888 788999999999999999999999999999999999999999


Q ss_pred             EEEecCHhhHHHHHHcCCEEEEEcC
Q 017995          148 LVIEDSVIGVVAGKAAGMEVVAVPS  172 (362)
Q Consensus       148 l~igDs~~d~~aA~~aG~~~i~v~~  172 (362)
                      +||||+..|+.+|+++|+.++++.+
T Consensus        95 ~~vgD~~~di~~a~~~G~~~i~~~~  119 (137)
T 2pr7_A           95 VLVDDSILNVRGAVEAGLVGVYYQQ  119 (137)
T ss_dssp             EEEESCHHHHHHHHHHTCEEEECSC
T ss_pred             EEEcCCHHHHHHHHHCCCEEEEeCC
Confidence            9999999999999999999999876

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A

Probab=99.71  E-value=1.4e-16  Score=144.14  Aligned_cols=128  Identities=20%  Similarity=0.320  Sum_probs=108.9

Q ss_pred             HHHHHHHHhCCCCCHHHHHHHHHHHHHhhhcCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcE
Q 017995           37 EAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSV  116 (362)
Q Consensus        37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~  116 (362)
                      .+..+...++.+.+.+. ..    .+...+....++||+.++|+.|+  |++++++||++...++..+ +.+|+..+|+.
T Consensus        65 ~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l-~~~gl~~~f~~  136 (253)
T 1qq5_A           65 ALAYTLGTLGLEPDESF-LA----DMAQAYNRLTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALV-ANAGLTDSFDA  136 (253)
T ss_dssp             HHHHHHHHTTCCCCHHH-HH----HHHGGGGSCCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHH-HHTTCGGGCSE
T ss_pred             HHHHHHHHhCCCCCHHH-HH----HHHHHHhcCCCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHH-HHCCchhhccE
Confidence            34445555555444322 22    23334456789999999999999  8999999999999998888 88999999999


Q ss_pred             EEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEEEcC
Q 017995          117 IVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS  172 (362)
Q Consensus       117 iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~~  172 (362)
                      +++++++..+||+|+.|..+++++|++|++|++|||+.+|+.+|+++|+.++++.+
T Consensus       137 ~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~~~  192 (253)
T 1qq5_A          137 VISVDAKRVFKPHPDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVAR  192 (253)
T ss_dssp             EEEGGGGTCCTTSHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECC
T ss_pred             EEEccccCCCCCCHHHHHHHHHHcCCCHHHEEEEeCChhhHHHHHHCCCEEEEECC
Confidence            99999999999999999999999999999999999999999999999999999987

>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}

Probab=99.71  E-value=5.7e-17  Score=143.68  Aligned_cols=149  Identities=20%  Similarity=0.343  Sum_probs=119.8

Q ss_pred             HHHHHHHhCCCCC-HHHHHHHHHHHHHhhhcCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcE
Q 017995           38 AAIIVEDYGLPCA-KHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSV  116 (362)
Q Consensus        38 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~  116 (362)
                      +..+....+.+.. ..++...+.+.+........++||+.++|+.|+++ ++++++||++..     + +.+|+.++|+.
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l-~~~~l~~~f~~  144 (230)
T 3vay_A           72 LFHALEDAGYDSDEAQQLADESFEVFLHGRHQVQIFPEVQPTLEILAKT-FTLGVITNGNAD-----V-RRLGLADYFAF  144 (230)
T ss_dssp             HHHHHHTTTCCHHHHHHHHHHHHHHHHHHHTCCCBCTTHHHHHHHHHTT-SEEEEEESSCCC-----G-GGSTTGGGCSE
T ss_pred             HHHHHHHhCCChhhhHHHHHHHHHHHHHhhccCccCcCHHHHHHHHHhC-CeEEEEECCchh-----h-hhcCcHHHeee
Confidence            3444455555421 12344445555555567789999999999999998 999999999876     5 78899999999


Q ss_pred             EEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCEEEEEcCCCCccccccchhHhhcccccc
Q 017995          117 IVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL  193 (362)
Q Consensus       117 iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~-~d~~aA~~aG~~~i~v~~~~~~~~~~ssa~~vi~~l~el  193 (362)
                      +++++++..+||+|+.|..+++++|++|++|++|||+. +|+.+|+++|+.++++.++.........++.+++++.++
T Consensus       145 ~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~l~el  222 (230)
T 3vay_A          145 ALCAEDLGIGKPDPAPFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDADRLPDAEIHNLSQL  222 (230)
T ss_dssp             EEEHHHHTCCTTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCSSSCCSEEESSGGGH
T ss_pred             eEEccccCCCCcCHHHHHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcccCCCCeeECCHHHH
Confidence            99999999999999999999999999999999999998 999999999999999988543222233567788888775

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2

Probab=99.70  E-value=2e-17  Score=144.29  Aligned_cols=157  Identities=14%  Similarity=0.145  Sum_probs=118.4

Q ss_pred             HHHHHHHcCCCCCHHHHHhhcCC-----------CHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhcCCCCCchHHHH
Q 017995           10 LKTFLVKYGKEWDGREKHKIVGK-----------TPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRL   78 (362)
Q Consensus        10 ~~~~l~~~g~~~~~~~~~~~~g~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~~~   78 (362)
                      +..+++++|.....+..+.+.+.           +..+..+.+...++...+.+++..    .+..  ....++||+.++
T Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~--~~~~~~~~~~~~   99 (206)
T 2b0c_A           26 VLGAWSDLTRIPLASLKKSFHMGEAFHQHERGEISDEAFAEALCHEMALPLSYEQFSH----GWQA--VFVALRPEVIAI   99 (206)
T ss_dssp             HHHHHHHHHCCCHHHHHHHCCCCHHHHHHHTTCSCHHHHHHHHHHHHTCCCCHHHHHH----HHHT--CEEEECHHHHHH
T ss_pred             HHHHHHHhcCCCHHHHHHHHhcccHHHHHhcCCCCHHHHHHHHHHHhCCCCCHHHHHH----HHHH--HhcccCccHHHH
Confidence            34455556655444444444332           344444455555554444333222    2211  136789999999


Q ss_pred             HHHHHHCCCcEEEEcCCChHhHHHHHHhh-cCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhH
Q 017995           79 IKHLSCHGVPMALASNSHRATIESKISYQ-HGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV  157 (362)
Q Consensus        79 L~~L~~~g~~~~i~S~~~~~~i~~~L~~~-~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~  157 (362)
                      |+.|+++|++++++||++...++..+ .. +|+..+|+.++++++++.+||+|+.|..+++++|++|++|++|||+.+|+
T Consensus       100 l~~l~~~g~~~~i~t~~~~~~~~~~~-~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di  178 (206)
T 2b0c_A          100 MHKLREQGHRVVVLSNTNRLHTTFWP-EEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTVFFDDNADNI  178 (206)
T ss_dssp             HHHHHHTTCEEEEEECCCCCTTSCCG-GGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHH
T ss_pred             HHHHHHCCCeEEEEECCChHHHHHHH-HhccChhhheeeEEEecccCCCCCCHHHHHHHHHHcCCCHHHeEEeCCCHHHH
Confidence            99999999999999999888766655 55 67888899999999999999999999999999999999999999999999


Q ss_pred             HHHHHcCCEEEEEcCC
Q 017995          158 VAGKAAGMEVVAVPSL  173 (362)
Q Consensus       158 ~aA~~aG~~~i~v~~~  173 (362)
                      .+|+++|+.++++.+.
T Consensus       179 ~~a~~aG~~~~~~~~~  194 (206)
T 2b0c_A          179 EGANQLGITSILVKDK  194 (206)
T ss_dssp             HHHHTTTCEEEECCST
T ss_pred             HHHHHcCCeEEEecCC
Confidence            9999999999999774

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}

Probab=99.70  E-value=3.9e-16  Score=140.82  Aligned_cols=184  Identities=14%  Similarity=0.139  Sum_probs=135.2

Q ss_pred             CHHHHHHHHHHHH---HHcCCCC----C----HHHHH--hhcCCCHHHHHHHHHH----HhCCCCCHHHHHHHHHHHHHh
Q 017995            2 TDGMFSEVLKTFL---VKYGKEW----D----GREKH--KIVGKTPLEEAAIIVE----DYGLPCAKHEFVNEVYSMFSD   64 (362)
Q Consensus         2 Se~~~~~a~~~~l---~~~g~~~----~----~~~~~--~~~g~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~   64 (362)
                      |+..+..++.+++   +++|.+.    .    .+.+.  ...|.+.......+..    ..+..... +....+.+.+.+
T Consensus        27 ~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  105 (251)
T 2pke_A           27 SEDYYRTAEADFEAILSGYLDLGDSRMQQHLLAVERRNLKIFGYGAKGMTLSMIETAIELTEARIEA-RDIQRIVEIGRA  105 (251)
T ss_dssp             CHHHHHHHHHHHHHHHTTTCCC-----CTTHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHTTTCCCH-HHHHHHHHHHHH
T ss_pred             CcHhHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHhhhhhhccCcchHHHHHHHHHHHHhcCCCCCh-HHHHHHHHHHHH
Confidence            4667788888877   4677654    2    11122  3678887766655443    33444333 334444444444


Q ss_pred             hh-cCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCC
Q 017995           65 HL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME  143 (362)
Q Consensus        65 ~~-~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~  143 (362)
                      .. ....++||+.++|+.|+ +|++++++||++...++..+ +.+++..+|+.++++     +||+|+.|..+++++|++
T Consensus       106 ~~~~~~~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l-~~~~l~~~f~~i~~~-----~kp~~~~~~~~~~~l~~~  178 (251)
T 2pke_A          106 TLQHPVEVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKI-EQSGLSDLFPRIEVV-----SEKDPQTYARVLSEFDLP  178 (251)
T ss_dssp             HHTCCCCBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHH-HHHSGGGTCCCEEEE-----SCCSHHHHHHHHHHHTCC
T ss_pred             HHhccCCcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHH-HHcCcHHhCceeeee-----CCCCHHHHHHHHHHhCcC
Confidence            33 56889999999999999 89999999999999888888 888999999988873     699999999999999999


Q ss_pred             CCcEEEEecCH-hhHHHHHHcCCEEEEEcCCCCcc----c--cccchhH-hhcccccc
Q 017995          144 PSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQT----H--RYTAADE-VINSLLDL  193 (362)
Q Consensus       144 p~~~l~igDs~-~d~~aA~~aG~~~i~v~~~~~~~----~--~~ssa~~-vi~~l~el  193 (362)
                      |++|++|||+. +|+.+|+++|+.+++|.++....    .  ....++. +++++.++
T Consensus       179 ~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~el  236 (251)
T 2pke_A          179 AERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREVPDPSGW  236 (251)
T ss_dssp             GGGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEECSSGGGH
T ss_pred             chhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeeeCCHHHH
Confidence            99999999999 99999999999999997653211    1  1124565 67777764

>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*

Probab=99.69  E-value=4.1e-17  Score=144.45  Aligned_cols=124  Identities=23%  Similarity=0.274  Sum_probs=102.8

Q ss_pred             cCCCCCchHHHHHHHHHHCCCcEEEEcCCC---------------hHhHHHHHHhhcCCcCCCcEEEe------------
Q 017995           67 CKVKALPGANRLIKHLSCHGVPMALASNSH---------------RATIESKISYQHGWNESFSVIVG------------  119 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~---------------~~~i~~~L~~~~gl~~~f~~iv~------------  119 (362)
                      ...+++||+.++|+.|+++|++++|+||++               ...++..+ +.+|+.  |+.++.            
T Consensus        47 ~~~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gl~--f~~~~~~~~~~~~~~~~~  123 (211)
T 2gmw_A           47 DNFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSL-ADRDVD--LDGIYYCPHHPQGSVEEF  123 (211)
T ss_dssp             GGCCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHH-HHTTCC--CSEEEEECCBTTCSSGGG
T ss_pred             ccCcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHH-HHcCCc--eEEEEECCcCCCCccccc
Confidence            457899999999999999999999999999               46777778 788887  777653            


Q ss_pred             CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEE-EEEcCCCCcccc-ccchhHhhcccccc
Q 017995          120 SDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV-VAVPSLPKQTHR-YTAADEVINSLLDL  193 (362)
Q Consensus       120 ~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~-i~v~~~~~~~~~-~ssa~~vi~~l~el  193 (362)
                      ++++..+||+|++|..++++++++|++|+||||+.+|+.+|+++|+.+ ++|.++...... ...++.++.++.++
T Consensus       124 ~~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~~l~el  199 (211)
T 2gmw_A          124 RQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADL  199 (211)
T ss_dssp             BSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGH
T ss_pred             CccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeCCHHHH
Confidence            345778999999999999999999999999999999999999999999 999875432221 12356677777664

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*

Probab=99.69  E-value=3e-16  Score=144.25  Aligned_cols=127  Identities=18%  Similarity=0.172  Sum_probs=108.4

Q ss_pred             cCCCCCchHHHHHHHHHHCCC--cEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCC----CCCCCCHHHHHHHHHHc
Q 017995           67 CKVKALPGANRLIKHLSCHGV--PMALASNSHRATIESKISYQHGWNESFSVIVGSDEV----RTGKPSPDIFLEAAKRL  140 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g~--~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~----~~gKp~p~~~~~~~~~~  140 (362)
                      ....++||+.++|+.|+++|+  +++|+||++...++..+ +.+|+.++|+.++++++.    ..+||+|+.|..+++++
T Consensus       139 ~~~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l-~~~gl~~~fd~v~~~~~~~~~~~~~Kp~~~~~~~~~~~l  217 (282)
T 3nuq_A          139 DILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCL-RLLGIADLFDGLTYCDYSRTDTLVCKPHVKAFEKAMKES  217 (282)
T ss_dssp             GTCCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHH-HHHTCTTSCSEEECCCCSSCSSCCCTTSHHHHHHHHHHH
T ss_pred             hccCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHH-HhCCcccccceEEEeccCCCcccCCCcCHHHHHHHHHHc
Confidence            458899999999999999999  99999999999999888 889999999999988765    46799999999999999


Q ss_pred             CCCC-CcEEEEecCHhhHHHHHHcCC-EEEEEcCCCCcc--ccccchhHhhccccccc
Q 017995          141 NMEP-SSSLVIEDSVIGVVAGKAAGM-EVVAVPSLPKQT--HRYTAADEVINSLLDLR  194 (362)
Q Consensus       141 ~~~p-~~~l~igDs~~d~~aA~~aG~-~~i~v~~~~~~~--~~~ssa~~vi~~l~el~  194 (362)
                      |++| ++|++|||+.+|+.+|+++|+ .++++.......  .....++.+++++.++.
T Consensus       218 gi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~sl~el~  275 (282)
T 3nuq_A          218 GLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILELP  275 (282)
T ss_dssp             TCCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEESSGGGGG
T ss_pred             CCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeCCHHHHH
Confidence            9999 999999999999999999999 677776643222  11235578888888753

>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A

Probab=99.69  E-value=7.6e-17  Score=140.58  Aligned_cols=122  Identities=19%  Similarity=0.291  Sum_probs=105.5

Q ss_pred             cCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCc
Q 017995           67 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS  146 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~  146 (362)
                      ....++||+.+ |+.|+++ ++++++||++...++..+ +.+|+.++|+.+++++++..+||+|+.|..+++++|  |++
T Consensus        71 ~~~~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~--~~~  145 (201)
T 2w43_A           71 KNLKAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHL-ERNGLLRYFKGIFSAESVKEYKPSPKVYKYFLDSIG--AKE  145 (201)
T ss_dssp             HTCEECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHH-HHTTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHT--CSC
T ss_pred             cccccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHH-HHCCcHHhCcEEEehhhcCCCCCCHHHHHHHHHhcC--CCc
Confidence            35789999999 9999999 999999999999988888 889999999999999999999999999999999999  999


Q ss_pred             EEEEecCHhhHHHHHHcCCEEEEEcCCCCcccc-ccchhHhhcccccc
Q 017995          147 SLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR-YTAADEVINSLLDL  193 (362)
Q Consensus       147 ~l~igDs~~d~~aA~~aG~~~i~v~~~~~~~~~-~ssa~~vi~~l~el  193 (362)
                      |++|||+.+|+.+|+++|+.++++.++...... ...++.++.++.++
T Consensus       146 ~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el  193 (201)
T 2w43_A          146 AFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVNDFKEL  193 (201)
T ss_dssp             CEEEESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEESSHHHH
T ss_pred             EEEEeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEECCHHHH
Confidence            999999999999999999999999874322111 22345666666553

>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*

Probab=99.67  E-value=4e-17  Score=140.56  Aligned_cols=104  Identities=17%  Similarity=0.216  Sum_probs=91.2

Q ss_pred             cCCCCCchHHHHHHHHHHCCCcEEEEcCC---------------ChHhHHHHHHhhcCCcCCCcEEEeC-----CCCCCC
Q 017995           67 CKVKALPGANRLIKHLSCHGVPMALASNS---------------HRATIESKISYQHGWNESFSVIVGS-----DEVRTG  126 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g~~~~i~S~~---------------~~~~i~~~L~~~~gl~~~f~~iv~~-----~d~~~g  126 (362)
                      ...+++||+.++|+.|+++|++++|+||+               +...++..+ +.+|+.  |+.|+.+     +++...
T Consensus        39 ~~~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gl~--fd~v~~s~~~~~~~~~~~  115 (176)
T 2fpr_A           39 DKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIF-TSQGVQ--FDEVLICPHLPADECDCR  115 (176)
T ss_dssp             GGCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHH-HHTTCC--EEEEEEECCCGGGCCSSS
T ss_pred             HHCcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHH-HHcCCC--eeEEEEcCCCCccccccc
Confidence            46889999999999999999999999998               577778788 888887  8888654     788899


Q ss_pred             CCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEEEcCC
Q 017995          127 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL  173 (362)
Q Consensus       127 Kp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~~~  173 (362)
                      ||+|++|..++++++++|++|+||||+..|+.+|+++|+.++++.+.
T Consensus       116 KP~p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~v~~~  162 (176)
T 2fpr_A          116 KPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRE  162 (176)
T ss_dssp             TTSCGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTT
T ss_pred             CCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeEEEEcCC
Confidence            99999999999999999999999999999999999999999999775

>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19

Probab=99.65  E-value=1.8e-16  Score=140.78  Aligned_cols=124  Identities=21%  Similarity=0.296  Sum_probs=103.2

Q ss_pred             cCCCCCchHHHHHHHHHHCCCcEEEEcCCCh---------------HhHHHHHHhhcCCcCCCcEEE-eC----------
Q 017995           67 CKVKALPGANRLIKHLSCHGVPMALASNSHR---------------ATIESKISYQHGWNESFSVIV-GS----------  120 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~---------------~~i~~~L~~~~gl~~~f~~iv-~~----------  120 (362)
                      ...+++||+.++|+.|+++|++++|+||++.               ..+...+ +.+|+.  |+.++ +.          
T Consensus        53 ~~~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gl~--~~~~~~~~~~~~g~~~~~  129 (218)
T 2o2x_A           53 AEIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELL-REEGVF--VDMVLACAYHEAGVGPLA  129 (218)
T ss_dssp             GGCCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHH-HHTTCC--CSEEEEECCCTTCCSTTC
T ss_pred             ccCeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHH-HHcCCc--eeeEEEeecCCCCceeec
Confidence            3578999999999999999999999999998               6777778 788874  56543 43          


Q ss_pred             -CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEE-EEEcCCCCcccc-ccchhHhhcccccc
Q 017995          121 -DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV-VAVPSLPKQTHR-YTAADEVINSLLDL  193 (362)
Q Consensus       121 -~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~-i~v~~~~~~~~~-~ssa~~vi~~l~el  193 (362)
                       +++..+||+|++|..++++++++|++|+||||+.+|+.+|+++|+.+ ++|.++...... ...++.++.++.++
T Consensus       130 ~~~~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~~~~i~~l~el  205 (218)
T 2o2x_A          130 IPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLRDSSELGDL  205 (218)
T ss_dssp             CSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEETTEEEEEESSHHHHHHH
T ss_pred             ccCCccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCEeEEEecCCCCcccccCCCCEecccHHHH
Confidence             66788999999999999999999999999999999999999999999 999886432221 22456777777764

>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*

Probab=99.64  E-value=2.5e-16  Score=156.41  Aligned_cols=110  Identities=19%  Similarity=0.270  Sum_probs=95.4

Q ss_pred             HHHhhhcCCCCCchHHHHHHHHHHCCCcEEEEcCC------ChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHH
Q 017995           61 MFSDHLCKVKALPGANRLIKHLSCHGVPMALASNS------HRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFL  134 (362)
Q Consensus        61 ~~~~~~~~~~~~pgv~~~L~~L~~~g~~~~i~S~~------~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~  134 (362)
                      .+........++||+.++|+.|+++|++++|+||+      ....+...+   .++.++|+.|+++++++.+||+|++|.
T Consensus        91 ~~~~~~~~~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~---~~l~~~fd~i~~~~~~~~~KP~p~~~~  167 (555)
T 3i28_A           91 IFDKAISARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLM---CELKMHFDFLIESCQVGMVKPEPQIYK  167 (555)
T ss_dssp             HHHHHHHHCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHH---HHHHTTSSEEEEHHHHTCCTTCHHHHH
T ss_pred             HHHHhHhhcCcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHh---hhhhhheeEEEeccccCCCCCCHHHHH
Confidence            33444455789999999999999999999999998      333333222   277889999999999999999999999


Q ss_pred             HHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEEEcCC
Q 017995          135 EAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL  173 (362)
Q Consensus       135 ~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~~~  173 (362)
                      .+++++|++|++|+||||+.+|+.+|+++|+.++++.+.
T Consensus       168 ~~~~~lg~~p~~~~~v~D~~~di~~a~~aG~~~~~~~~~  206 (555)
T 3i28_A          168 FLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQDT  206 (555)
T ss_dssp             HHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEECSSH
T ss_pred             HHHHHcCCChhHEEEECCcHHHHHHHHHcCCEEEEECCC
Confidence            999999999999999999999999999999999999763

>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}

Probab=99.63  E-value=1.4e-16  Score=142.34  Aligned_cols=179  Identities=15%  Similarity=0.142  Sum_probs=125.5

Q ss_pred             CHHHHHHHHHHHHHHcCCCCCH------HHHHhhcCCC-HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhcCCCCCch
Q 017995            2 TDGMFSEVLKTFLVKYGKEWDG------REKHKIVGKT-PLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPG   74 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~~~~------~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg   74 (362)
                      |+..+..+++++++++|++.+.      +.+....|.. ..+.+..+.......    +....+.+.+........++||
T Consensus        25 s~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~g  100 (231)
T 2p11_A           25 NDHVLADLRAHMMREFGAQNSARYWEIFETLRTELGYADYLGALQRYRLEQPRD----TRLLLMSSFLIDYPFASRVYPG  100 (231)
T ss_dssp             HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHCTTC----TGGGGGHHHHHHCCGGGGBCTT
T ss_pred             cHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHhcCchHHHHHHHHHHhccccc----hHHHHHHHHHHHHHHhCCcCcc
Confidence            4677889999999999976543      2334445654 334443333322211    1222233444444456789999


Q ss_pred             HHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCH
Q 017995           75 ANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV  154 (362)
Q Consensus        75 v~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~  154 (362)
                      +.++|+.|+++| +++|+||++...++..+ +.+|+.++|+.+++.   ...|  |..+..+++  +++|++|+||||+.
T Consensus       101 ~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l-~~~gl~~~f~~~~~~---~~~K--~~~~~~~~~--~~~~~~~~~vgDs~  171 (231)
T 2p11_A          101 ALNALRHLGARG-PTVILSDGDVVFQPRKI-ARSGLWDEVEGRVLI---YIHK--ELMLDQVME--CYPARHYVMVDDKL  171 (231)
T ss_dssp             HHHHHHHHHTTS-CEEEEEECCSSHHHHHH-HHTTHHHHTTTCEEE---ESSG--GGCHHHHHH--HSCCSEEEEECSCH
T ss_pred             HHHHHHHHHhCC-CEEEEeCCCHHHHHHHH-HHcCcHHhcCeeEEe---cCCh--HHHHHHHHh--cCCCceEEEEcCcc
Confidence            999999999999 99999999999999888 889999998876542   2334  566766665  79999999999999


Q ss_pred             h---hHHHHHHcCCEEEEEcCCCC--ccccc--c-chhHhhcccccc
Q 017995          155 I---GVVAGKAAGMEVVAVPSLPK--QTHRY--T-AADEVINSLLDL  193 (362)
Q Consensus       155 ~---d~~aA~~aG~~~i~v~~~~~--~~~~~--s-sa~~vi~~l~el  193 (362)
                      .   |+++|+++|+.++++.++..  .....  . .++.++.++.++
T Consensus       172 ~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i~~~~el  218 (231)
T 2p11_A          172 RILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTVERIGDL  218 (231)
T ss_dssp             HHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEESSGGGG
T ss_pred             chhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCceeecCHHHH
Confidence            8   99999999999999988532  11111  1 256677777764

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A

Probab=99.58  E-value=7.9e-15  Score=127.01  Aligned_cols=103  Identities=16%  Similarity=0.127  Sum_probs=93.1

Q ss_pred             cCCCCCchHHHHHHHHHHCCCcEEEEcCCC-hHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 017995           67 CKVKALPGANRLIKHLSCHGVPMALASNSH-RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS  145 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~-~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~  145 (362)
                      ...+++||+.++|+.|+++|++++|+||++ ...++..+ +.+|+..+|+.+++.     ++|+|+.|..++++++++|+
T Consensus        65 ~~~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l-~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~~~  138 (187)
T 2wm8_A           65 QDVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLL-ELFDLFRYFVHREIY-----PGSKITHFERLQQKTGIPFS  138 (187)
T ss_dssp             CEECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHH-HHTTCTTTEEEEEES-----SSCHHHHHHHHHHHHCCCGG
T ss_pred             cccCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHH-HHcCcHhhcceeEEE-----eCchHHHHHHHHHHcCCChH
Confidence            356889999999999999999999999999 68888888 889999999987553     25788999999999999999


Q ss_pred             cEEEEecCHhhHHHHHHcCCEEEEEcCCCC
Q 017995          146 SSLVIEDSVIGVVAGKAAGMEVVAVPSLPK  175 (362)
Q Consensus       146 ~~l~igDs~~d~~aA~~aG~~~i~v~~~~~  175 (362)
                      +|++|||+.+|+.+|+++|+.++.+.++..
T Consensus       139 ~~~~igD~~~Di~~a~~aG~~~i~v~~g~~  168 (187)
T 2wm8_A          139 QMIFFDDERRNIVDVSKLGVTCIHIQNGMN  168 (187)
T ss_dssp             GEEEEESCHHHHHHHHTTTCEEEECSSSCC
T ss_pred             HEEEEeCCccChHHHHHcCCEEEEECCCCC
Confidence            999999999999999999999999988643

>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A

Probab=99.56  E-value=2.1e-14  Score=127.16  Aligned_cols=173  Identities=12%  Similarity=0.117  Sum_probs=113.5

Q ss_pred             HHHHHHHHcCCCCC-HHHHHhhcCC--CHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhcCCCCCchHHHHHHHHHHC
Q 017995            9 VLKTFLVKYGKEWD-GREKHKIVGK--TPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCH   85 (362)
Q Consensus         9 a~~~~l~~~g~~~~-~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~~~L~~L~~~   85 (362)
                      ++.++++.+|.+.+ .+......|.  +..+.+........  ...+.    +.+.+..  ...+++||+.++|+.|+++
T Consensus        30 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~--~~~~~~~g~~~~l~~L~~~  101 (225)
T 1nnl_A           30 GIDELAKICGVEDAVSEMTRRAMGGAVPFKAALTERLALIQ--PSREQ----VQRLIAE--QPPHLTPGIRELVSRLQER  101 (225)
T ss_dssp             HHHHHHHHTTCTTTC------------CHHHHHHHHHHHHC--CCHHH----HHHHHHH--SCCCBCTTHHHHHHHHHHT
T ss_pred             cHHHHHHHhCCcHHHHHHHHHHHcCCccHHHHHHHHHHHhc--CCHHH----HHHHHHh--ccCCCCccHHHHHHHHHHC
Confidence            35677888887653 3334444443  33444433332222  12222    2222221  2478999999999999999


Q ss_pred             CCcEEEEcCCChHhHHHHHHhhcCCc--CCCcEEE--------eCCCCCC----CCCCHHHHHHHHHHcCCCCCcEEEEe
Q 017995           86 GVPMALASNSHRATIESKISYQHGWN--ESFSVIV--------GSDEVRT----GKPSPDIFLEAAKRLNMEPSSSLVIE  151 (362)
Q Consensus        86 g~~~~i~S~~~~~~i~~~L~~~~gl~--~~f~~iv--------~~~d~~~----gKp~p~~~~~~~~~~~~~p~~~l~ig  151 (362)
                      |++++|+||++...++..+ +++|+.  ++|+.++        ++.+...    .+|+|+.+..+++++|+  ++|+|||
T Consensus       102 g~~~~i~T~~~~~~~~~~l-~~~gl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~--~~~~~vG  178 (225)
T 1nnl_A          102 NVQVFLISGGFRSIVEHVA-SKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHF--KKIIMIG  178 (225)
T ss_dssp             TCEEEEEEEEEHHHHHHHH-HHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHHHHHHHHHCC--SCEEEEE
T ss_pred             CCcEEEEeCChHHHHHHHH-HHcCCCcccEEeeeEEEcCCCcEecCCCCCcccCCCchHHHHHHHHHHcCC--CcEEEEe
Confidence            9999999999999999888 888997  3777653        4444332    35778999999999998  7999999


Q ss_pred             cCHhhHHHHHHcCCEEEEEcCCCCccccccchhHhhcccccc
Q 017995          152 DSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL  193 (362)
Q Consensus       152 Ds~~d~~aA~~aG~~~i~v~~~~~~~~~~ssa~~vi~~l~el  193 (362)
                      |+.+|+.+|+++|+ ++.+............++.+++++.++
T Consensus       179 Ds~~Di~~a~~ag~-~i~~~~~~~~~~~~~~~~~~~~~~~el  219 (225)
T 1nnl_A          179 DGATDMEACPPADA-FIGFGGNVIRQQVKDNAKWYITDFVEL  219 (225)
T ss_dssp             SSHHHHTTTTTSSE-EEEECSSCCCHHHHHHCSEEESCGGGG
T ss_pred             CcHHhHHHHHhCCe-EEEecCccccHHHHhcCCeeecCHHHH
Confidence            99999999999999 777754322111122356667777664

>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0

Probab=99.55  E-value=8.4e-15  Score=128.55  Aligned_cols=102  Identities=15%  Similarity=0.142  Sum_probs=93.7

Q ss_pred             cCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEe----------CCCCCCCCCCHHHHHHH
Q 017995           67 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVG----------SDEVRTGKPSPDIFLEA  136 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~----------~~d~~~gKp~p~~~~~~  136 (362)
                      ...+++||+.++|+.|+++|++++++||++...++..+ +.+|+..+|+.+++          +.+...+||+|+.|..+
T Consensus        72 ~~~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l-~~~gl~~~f~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~  150 (217)
T 3m1y_A           72 ESLPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYR-DLLHLDAAFSNTLIVENDALNGLVTGHMMFSHSKGEMLLVL  150 (217)
T ss_dssp             TTCCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHH-HHHTCSEEEEEEEEEETTEEEEEEEESCCSTTHHHHHHHHH
T ss_pred             hcCcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHH-HHcCcchhccceeEEeCCEEEeeeccCCCCCCChHHHHHHH
Confidence            45789999999999999999999999999999999888 88899999998873          33456789999999999


Q ss_pred             HHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEE
Q 017995          137 AKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA  169 (362)
Q Consensus       137 ~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~  169 (362)
                      ++++|++|++|++|||+.+|+.+|+.+|+.+++
T Consensus       151 ~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~  183 (217)
T 3m1y_A          151 QRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF  183 (217)
T ss_dssp             HHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE
T ss_pred             HHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE
Confidence            999999999999999999999999999999876

>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A

Probab=99.54  E-value=1.1e-14  Score=127.16  Aligned_cols=101  Identities=14%  Similarity=0.076  Sum_probs=90.4

Q ss_pred             cCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCC-cEEEeCCCCCCC---CCCHHHHHHHHHHcCC
Q 017995           67 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF-SVIVGSDEVRTG---KPSPDIFLEAAKRLNM  142 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f-~~iv~~~d~~~g---Kp~p~~~~~~~~~~~~  142 (362)
                      ...+++||+.++|+.|+++ ++++|+||++...++..+ +.+|+..+| +.++++++....   +|+|+.+..++++++.
T Consensus        66 ~~~~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l-~~~gl~~~f~~~~~~~~~~~~~~~~~p~p~~~~~~l~~l~~  143 (206)
T 1rku_A           66 ATLKPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLM-RQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKS  143 (206)
T ss_dssp             TTCCCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHH-HHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHH
T ss_pred             HhcCCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHH-HHcCCcceecceeEEcCCceEEeeecCCCchHHHHHHHHHh
Confidence            4678999999999999999 999999999999998888 889999999 577777666421   4888999999999999


Q ss_pred             CCCcEEEEecCHhhHHHHHHcCCEEEE
Q 017995          143 EPSSSLVIEDSVIGVVAGKAAGMEVVA  169 (362)
Q Consensus       143 ~p~~~l~igDs~~d~~aA~~aG~~~i~  169 (362)
                      .|++|+||||+.+|+.+|+++|+.++.
T Consensus       144 ~~~~~~~iGD~~~Di~~a~~aG~~~~~  170 (206)
T 1rku_A          144 LYYRVIAAGDSYNDTTMLSEAHAGILF  170 (206)
T ss_dssp             TTCEEEEEECSSTTHHHHHHSSEEEEE
T ss_pred             cCCEEEEEeCChhhHHHHHhcCccEEE
Confidence            999999999999999999999999764

>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A

Probab=99.50  E-value=6.4e-14  Score=130.35  Aligned_cols=101  Identities=16%  Similarity=0.042  Sum_probs=87.5

Q ss_pred             CCCCchHHHHHHHHHHCCCcEEEEcCCChHh---HHHHHHhh--------cCCcCCCcEEEeCCCCCCCCCCHHHHHHHH
Q 017995           69 VKALPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQ--------HGWNESFSVIVGSDEVRTGKPSPDIFLEAA  137 (362)
Q Consensus        69 ~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~---i~~~L~~~--------~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~  137 (362)
                      .+++||+.++|+.|+++|++++|+||++...   +...| ++        +|+  +|+.++++++. ..||+|+++..++
T Consensus       187 ~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l-~~~~~~~~~~~~~--~~~~~~~~~~~-~~kp~p~~~~~~~  262 (301)
T 1ltq_A          187 DVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYY-RMTRKWVEDIAGV--PLVMQCQREQG-DTRKDDVVKEEIF  262 (301)
T ss_dssp             CCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHH-HHHHHHHHHTTCC--CCSEEEECCTT-CCSCHHHHHHHHH
T ss_pred             cCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHH-HhcccccccccCC--CchheeeccCC-CCcHHHHHHHHHH
Confidence            3469999999999999999999999998654   34556 56        788  58999988776 4699999999999


Q ss_pred             HHcCCCCCc-EEEEecCHhhHHHHHHcCCEEEEEcCC
Q 017995          138 KRLNMEPSS-SLVIEDSVIGVVAGKAAGMEVVAVPSL  173 (362)
Q Consensus       138 ~~~~~~p~~-~l~igDs~~d~~aA~~aG~~~i~v~~~  173 (362)
                      ++++.++.+ |+||||+..|+++|+++|+.++.|.++
T Consensus       263 ~~~~~~~~~~~~~vgD~~~di~~a~~aG~~~~~v~~G  299 (301)
T 1ltq_A          263 WKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASG  299 (301)
T ss_dssp             HHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred             HHHhccccceEEEeCCcHHHHHHHHHcCCeEEEecCC
Confidence            999887755 799999999999999999999999886

>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}

Probab=99.48  E-value=5.2e-14  Score=132.32  Aligned_cols=102  Identities=15%  Similarity=0.164  Sum_probs=92.9

Q ss_pred             cCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEe----------CCCCCCCCCCHHHHHHH
Q 017995           67 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVG----------SDEVRTGKPSPDIFLEA  136 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~----------~~d~~~gKp~p~~~~~~  136 (362)
                      ...+++||+.++|+.|+++|++++|+||++..+++..+ +.+|+..+|+.++.          +.+...+||+|+.|..+
T Consensus       176 ~~~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l-~~lgl~~~f~~~l~~~dg~~tg~i~~~~~~~kpkp~~~~~~  254 (317)
T 4eze_A          176 DRMTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLK-ARYQLDYAFSNTVEIRDNVLTDNITLPIMNAANKKQTLVDL  254 (317)
T ss_dssp             HTCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HHHTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHH
T ss_pred             hCCEECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHH-HHcCCCeEEEEEEEeeCCeeeeeEecccCCCCCCHHHHHHH
Confidence            45789999999999999999999999999999999888 88999999987764          33445679999999999


Q ss_pred             HHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEE
Q 017995          137 AKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA  169 (362)
Q Consensus       137 ~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~  169 (362)
                      ++++|++|++|+||||+.+|+.+|+++|+.+++
T Consensus       255 ~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~  287 (317)
T 4eze_A          255 AARLNIATENIIACGDGANDLPMLEHAGTGIAW  287 (317)
T ss_dssp             HHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred             HHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEe
Confidence            999999999999999999999999999998877

>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14

Probab=99.46  E-value=3.6e-15  Score=133.05  Aligned_cols=179  Identities=18%  Similarity=0.195  Sum_probs=123.0

Q ss_pred             HHHHHHHcCCCCCHHHHHhhcCCCHHHHHHHHHHHhCCCCCHHHHH---HHHHHHHHhhhcCCCCCchHHHHHHHHHHCC
Q 017995           10 LKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFV---NEVYSMFSDHLCKVKALPGANRLIKHLSCHG   86 (362)
Q Consensus        10 ~~~~l~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~pgv~~~L~~L~~~g   86 (362)
                      +.+.+++.|+++.  ......|.+.....+.+.. .+.+.+.+.+.   .....+.........++||+.++|+.|++.|
T Consensus        27 ~~~~l~~~g~~~~--~~t~~~g~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g  103 (250)
T 2c4n_A           27 FLHGIMDKGLPLV--LLTNYPSQTGQDLANRFAT-AGVDVPDSVFYTSAMATADFLRRQEGKKAYVVGEGALIHELYKAG  103 (250)
T ss_dssp             HHHHHHHTTCCEE--EEESCCSCCHHHHHHHHHH-TTCCCCGGGEEEHHHHHHHHHHTSSCCEEEEECCTHHHHHHHHTT
T ss_pred             HHHHHHHcCCcEE--EEECCCCCCHHHHHHHHHH-cCCCCCHHHeEcHHHHHHHHHHhcCCCEEEEEcCHHHHHHHHHcC
Confidence            4556777887654  1223347777777766654 55543322211   1111222222345678899999999999999


Q ss_pred             CcEE---------------------------------EEcCCChHhHHHHHHhhcC-CcCCCcEEEeCCCCCCCCCCHHH
Q 017995           87 VPMA---------------------------------LASNSHRATIESKISYQHG-WNESFSVIVGSDEVRTGKPSPDI  132 (362)
Q Consensus        87 ~~~~---------------------------------i~S~~~~~~i~~~L~~~~g-l~~~f~~iv~~~d~~~gKp~p~~  132 (362)
                      ++++                                 ++|+.+ ......+ ..++ +..+|+.+++.+....+||+|..
T Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~t~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~kpk~~~  181 (250)
T 2c4n_A          104 FTITDVNPDFVIVGETRSYNWDMMHKAAYFVANGARFIATNPD-THGRGFY-PACGALCAGIEKISGRKPFYVGKPSPWI  181 (250)
T ss_dssp             CEECSSSCSEEEECCCTTCCHHHHHHHHHHHHTTCEEEESCCC-SBSSTTC-BCHHHHHHHHHHHHCCCCEECSTTSTHH
T ss_pred             CcccCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEEEECCC-CCCCCee-ecchHHHHHHHHHhCCCceEeCCCCHHH
Confidence            9999                                 888876 4333333 3334 44556666677777889999999


Q ss_pred             HHHHHHHcCCCCCcEEEEecC-HhhHHHHHHcCCEEEEEcCCCCccccc----cchhHhhcccccc
Q 017995          133 FLEAAKRLNMEPSSSLVIEDS-VIGVVAGKAAGMEVVAVPSLPKQTHRY----TAADEVINSLLDL  193 (362)
Q Consensus       133 ~~~~~~~~~~~p~~~l~igDs-~~d~~aA~~aG~~~i~v~~~~~~~~~~----ssa~~vi~~l~el  193 (362)
                      |..+++++|++|++|++|||+ .+|+.+|+.+|+.+++|.++....+..    ..++.+++++.++
T Consensus       182 ~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~~~~el  247 (250)
T 2c4n_A          182 IRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPSVAEI  247 (250)
T ss_dssp             HHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESSGGGC
T ss_pred             HHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEECCHHHh
Confidence            999999999999999999999 699999999999999998864332221    2456666666653

>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*

Probab=99.45  E-value=1.4e-13  Score=134.11  Aligned_cols=99  Identities=15%  Similarity=0.275  Sum_probs=89.4

Q ss_pred             CCchHHHHHHHHHHCCCcEEEEcCCC---------hHh---HHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHH
Q 017995           71 ALPGANRLIKHLSCHGVPMALASNSH---------RAT---IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAK  138 (362)
Q Consensus        71 ~~pgv~~~L~~L~~~g~~~~i~S~~~---------~~~---i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~  138 (362)
                      ++||+.++|+.|+++|++++|+||.+         ..+   +...| +.+|+.  |+.+++++++.++||+|++|..+++
T Consensus        88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l-~~lgl~--fd~i~~~~~~~~~KP~p~~~~~a~~  164 (416)
T 3zvl_A           88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVL-EKLGVP--FQVLVATHAGLNRKPVSGMWDHLQE  164 (416)
T ss_dssp             SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHH-HHHTSC--CEEEEECSSSTTSTTSSHHHHHHHH
T ss_pred             hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHH-HHcCCC--EEEEEECCCCCCCCCCHHHHHHHHH
Confidence            79999999999999999999999966         333   66667 778884  8999999999999999999999999


Q ss_pred             HcC----CCCCcEEEEecCH-----------------hhHHHHHHcCCEEEEEcC
Q 017995          139 RLN----MEPSSSLVIEDSV-----------------IGVVAGKAAGMEVVAVPS  172 (362)
Q Consensus       139 ~~~----~~p~~~l~igDs~-----------------~d~~aA~~aG~~~i~v~~  172 (362)
                      +++    ++|++|+||||+.                 .|+.+|+++|+.++....
T Consensus       165 ~l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~aGi~f~~pe~  219 (416)
T 3zvl_A          165 QANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFATPEE  219 (416)
T ss_dssp             HSSTTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHHHTCCEECHHH
T ss_pred             HhCCCCCCCHHHeEEEECCCCCcccccccccccCCChhhHHHHHHcCCcccCcHH
Confidence            997    9999999999997                 899999999999887554

>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14

Probab=99.45  E-value=5.9e-15  Score=134.33  Aligned_cols=125  Identities=14%  Similarity=0.155  Sum_probs=99.1

Q ss_pred             CCCCCchHHHHHHHHHHCCCcEEEEcCCChHh--HHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 017995           68 KVKALPGANRLIKHLSCHGVPMALASNSHRAT--IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS  145 (362)
Q Consensus        68 ~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~--i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~  145 (362)
                      ...++||+.++|+.|+ +|+++ |+||++...  ....+....++..+|+.++++++...+||+|++|..+++++|++|+
T Consensus       124 ~~~~~~~~~~~l~~l~-~g~~~-i~tn~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~  201 (264)
T 1yv9_A          124 TELSYEKVVLATLAIQ-KGALF-IGTNPDKNIPTERGLLPGAGSVVTFVETATQTKPVYIGKPKAIIMERAIAHLGVEKE  201 (264)
T ss_dssp             TTCCHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHTCCCEECSTTSHHHHHHHHHHHCSCGG
T ss_pred             CCcCHHHHHHHHHHHh-CCCEE-EEECCCCcccCCCCcccCCcHHHHHHHHHhCCCccccCCCCHHHHHHHHHHcCCCHH
Confidence            4668999999999997 89987 999988743  1111113334566778888888888999999999999999999999


Q ss_pred             cEEEEecCH-hhHHHHHHcCCEEEEEcCCCCcccccc----chhHhhccccccc
Q 017995          146 SSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRYT----AADEVINSLLDLR  194 (362)
Q Consensus       146 ~~l~igDs~-~d~~aA~~aG~~~i~v~~~~~~~~~~s----sa~~vi~~l~el~  194 (362)
                      +|+||||+. +|+.+|+++|+.+++|.++........    .++.++.++.++.
T Consensus       202 ~~~~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~~~~d~v~~~l~el~  255 (264)
T 1yv9_A          202 QVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDSLDEWT  255 (264)
T ss_dssp             GEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESSGGGCC
T ss_pred             HEEEECCCcHHHHHHHHHcCCcEEEECCCCCCHHHHHhcCCCCCEEEecHHHHh
Confidence            999999994 999999999999999988643322211    4678888887754

>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}

Probab=99.44  E-value=1.3e-12  Score=115.90  Aligned_cols=120  Identities=13%  Similarity=-0.018  Sum_probs=95.1

Q ss_pred             CHHHHHHHHHHHHHhhhcCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCC--------
Q 017995           50 AKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD--------  121 (362)
Q Consensus        50 ~~~~~~~~~~~~~~~~~~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~--------  121 (362)
                      +.+++.....+.+..... ..++||+.++|+.|+++|++++|+|+++...++..+ +.+|+.++|...+...        
T Consensus        73 ~~~~~~~~~~~~~~~~~~-~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~g~~  150 (232)
T 3fvv_A           73 SPVELAAWHEEFMRDVIR-PSLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIA-RAFGVQHLIATDPEYRDGRYTGRI  150 (232)
T ss_dssp             CHHHHHHHHHHHHHHTTG-GGCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-HHTTCCEEEECEEEEETTEEEEEE
T ss_pred             CHHHHHHHHHHHHHHhhh-hhcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-HHcCCCEEEEcceEEECCEEeeee
Confidence            455555555555554432 267999999999999999999999999999999888 8889976554332211        


Q ss_pred             --CCCCCCCCHHHHHHHHHHcC---CCCCcEEEEecCHhhHHHHHHcCCEEEEEc
Q 017995          122 --EVRTGKPSPDIFLEAAKRLN---MEPSSSLVIEDSVIGVVAGKAAGMEVVAVP  171 (362)
Q Consensus       122 --d~~~gKp~p~~~~~~~~~~~---~~p~~~l~igDs~~d~~aA~~aG~~~i~v~  171 (362)
                        ....+++++..+..++++++   ++|++|++||||.+|+.+++.+|+.+++.+
T Consensus       151 ~~~~~~~~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~~  205 (232)
T 3fvv_A          151 EGTPSFREGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAANP  205 (232)
T ss_dssp             ESSCSSTHHHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEESC
T ss_pred             cCCCCcchHHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEECc
Confidence              23346777889999999999   999999999999999999999999987643

>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*

Probab=99.17  E-value=7.9e-15  Score=134.26  Aligned_cols=177  Identities=12%  Similarity=0.126  Sum_probs=127.2

Q ss_pred             CHHHHHHHHHHHHHHcCCCC-CHHHHHhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhh-cCCCCCchHHHHH
Q 017995            2 TDGMFSEVLKTFLVKYGKEW-DGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHL-CKVKALPGANRLI   79 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~pgv~~~L   79 (362)
                      |++.+..|+.++++..|++. +.+.++.+.|.+....+.......|.+.....+...+...|.... ...+++||+.++|
T Consensus        66 s~hp~a~ai~~~~~~~g~~~~~~~~~~~~~G~g~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l  145 (263)
T 2yj3_A           66 SSHPIAKAIVKYAKEQGVKILEVKDFKEISGIGVRGKISDKIIEVKKAENNNDIAVYINGEPIASFNISDVPRPNLKDYL  145 (263)
Confidence            34556677888888888754 456677888887776665543333432211223333334444333 3578999999999


Q ss_pred             HHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHH
Q 017995           80 KHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA  159 (362)
Q Consensus        80 ~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~a  159 (362)
                      +.|+++|++++++|+.+...++..+ +.+|+.++|+.++           |+.+..++++++..|++|+||||+.+|+.+
T Consensus       146 ~~L~~~g~~~~i~T~~~~~~~~~~~-~~~gl~~~f~~~~-----------p~~k~~~~~~l~~~~~~~~~VGD~~~D~~a  213 (263)
T 2yj3_A          146 EKLKNEGLKIIILSGDKEDKVKELS-KELNIQEYYSNLS-----------PEDKVRIIEKLKQNGNKVLMIGDGVNDAAA  213 (263)
Confidence            9999999999999999999999888 8899998888775           456788899999999999999999999999


Q ss_pred             HHHcCCEEEEEcCCCCccccccchhHhh--cccccc
Q 017995          160 GKAAGMEVVAVPSLPKQTHRYTAADEVI--NSLLDL  193 (362)
Q Consensus       160 A~~aG~~~i~v~~~~~~~~~~ssa~~vi--~~l~el  193 (362)
                      |+++|+.+.+-.   ........++.++  .++.++
T Consensus       214 a~~Agv~va~g~---~~~~~~~~ad~v~~~~~l~~l  246 (263)
T 2yj3_A          214 LALADVSVAMGN---GVDISKNVADIILVSNDIGTL  246 (263)
Confidence            999997654432   1122223456776  666654

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}

Probab=99.43  E-value=6.8e-15  Score=135.68  Aligned_cols=102  Identities=20%  Similarity=0.326  Sum_probs=87.8

Q ss_pred             chHHHHHHHHHHCCCcEEEEcCCChHhH--HH-HHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHc----CCCCC
Q 017995           73 PGANRLIKHLSCHGVPMALASNSHRATI--ES-KISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL----NMEPS  145 (362)
Q Consensus        73 pgv~~~L~~L~~~g~~~~i~S~~~~~~i--~~-~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~----~~~p~  145 (362)
                      +...++++.|+++|++ +|+||++....  .. .+.+..++..+|+.+++++++..+||+|++|..+++++    +++|+
T Consensus       148 ~~~~~l~~~L~~~g~~-~i~tn~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~~  226 (284)
T 2hx1_A          148 HDLNKTVNLLRKRTIP-AIVANTDNTYPLTKTDVAIAIGGVATMIESILGRRFIRFGKPDSQMFMFAYDMLRQKMEISKR  226 (284)
T ss_dssp             HHHHHHHHHHHHCCCC-EEEECCCSEEECSSSCEEECHHHHHHHHHHHHCSCEEEESTTSSHHHHHHHHHHHTTSCCCGG
T ss_pred             ccHHHHHHHHhcCCCe-EEEECCCccccCcCCCccccCChHHHHHHHHhCCceeEecCCCHHHHHHHHHHHhhccCCCcc
Confidence            3677778899999999 99999987765  31 21145577788999999999999999999999999999    99999


Q ss_pred             cEEEEecCH-hhHHHHHHcCCEEEEEcCCCC
Q 017995          146 SSLVIEDSV-IGVVAGKAAGMEVVAVPSLPK  175 (362)
Q Consensus       146 ~~l~igDs~-~d~~aA~~aG~~~i~v~~~~~  175 (362)
                      +|+||||+. +|+.+|+++|+.+++|.++..
T Consensus       227 ~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~  257 (284)
T 2hx1_A          227 EILMVGDTLHTDILGGNKFGLDTALVLTGNT  257 (284)
T ss_dssp             GEEEEESCTTTHHHHHHHHTCEEEEESSSSS
T ss_pred             eEEEECCCcHHHHHHHHHcCCeEEEECCCCC
Confidence            999999996 999999999999999988643

>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*

Probab=99.41  E-value=2.5e-15  Score=130.77  Aligned_cols=140  Identities=11%  Similarity=0.191  Sum_probs=107.1

Q ss_pred             CHHHHHHHHHHHHHHcCCC-CCHHHHHhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhh--hcCCCCCchHHHH
Q 017995            2 TDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH--LCKVKALPGANRL   78 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~pgv~~~   78 (362)
                      |+..+..+|+++++  |++ ++.+.+..+.   ..+.+..+     .+    ++.+.+.+.|.+.  ....+++||+.++
T Consensus        16 s~~~~~~~~~~~~~--g~~~~~~~~~~~~~---~~~~~~~~-----~~----~~~~~~~~~~~~~~~~~~~~~~~g~~e~   81 (193)
T 2i7d_A           16 FEAGLLRGFRRRFP--EEPHVPLEQRRGFL---AREQYRAL-----RP----DLADKVASVYEAPGFFLDLEPIPGALDA   81 (193)
T ss_dssp             HHHHHHHHHHHHST--TSCCCCGGGCCSSC---HHHHHHHH-----CT----THHHHHHHHHTSTTTTTTCCBCTTHHHH
T ss_pred             chhHHHHHHHHHhc--CCCCCCHHHHHHhh---HHHHHHHH-----hH----HHHHHHHHHHHhcCccccCccCcCHHHH
Confidence            46778889998887  876 5666554443   23333222     11    2234455566554  2468899999999


Q ss_pred             HHHHHHC-CCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhh-
Q 017995           79 IKHLSCH-GVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG-  156 (362)
Q Consensus        79 L~~L~~~-g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d-  156 (362)
                      |+.|+++ |++++|+||++...++..+ +.+|+   |+.+++++              ++++++++|++|+||||+..| 
T Consensus        82 L~~L~~~~g~~~~ivT~~~~~~~~~~l-~~~gl---f~~i~~~~--------------~~~~~~~~~~~~~~vgDs~~dD  143 (193)
T 2i7d_A           82 VREMNDLPDTQVFICTSPLLKYHHCVG-EKYRW---VEQHLGPQ--------------FVERIILTRDKTVVLGDLLIDD  143 (193)
T ss_dssp             HHHHHTSTTEEEEEEECCCSSCTTTHH-HHHHH---HHHHHCHH--------------HHTTEEECSCGGGBCCSEEEES
T ss_pred             HHHHHhCCCCeEEEEeCCChhhHHHHH-HHhCc---hhhhcCHH--------------HHHHcCCCcccEEEECCchhhC
Confidence            9999999 9999999999998888888 77777   77776542              678999999999999999999 


Q ss_pred             ---HHHHH-HcCCEEEEEcCC
Q 017995          157 ---VVAGK-AAGMEVVAVPSL  173 (362)
Q Consensus       157 ---~~aA~-~aG~~~i~v~~~  173 (362)
                         +.+|+ ++|+.++++...
T Consensus       144 ~~~i~~A~~~aG~~~i~~~~~  164 (193)
T 2i7d_A          144 KDTVRGQEETPSWEHILFTCC  164 (193)
T ss_dssp             SSCCCSSCSSCSSEEEEECCG
T ss_pred             cHHHhhcccccccceEEEEec
Confidence               99999 999999999764

>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20

Probab=99.41  E-value=1.5e-13  Score=123.08  Aligned_cols=98  Identities=16%  Similarity=0.133  Sum_probs=86.9

Q ss_pred             cCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCC--------CCCCHHH-HH---
Q 017995           67 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRT--------GKPSPDI-FL---  134 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~--------gKp~p~~-~~---  134 (362)
                      ...+++||+.++|+.|+++|++++|+||++...++..+ +  ++.++ +.|+++++...        .||+|.. +.   
T Consensus        74 ~~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l-~--~l~~~-~~v~~~~~~~~~~~~~~~~~kp~p~~~~~~~~  149 (236)
T 2fea_A           74 EDAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLL-E--GIVEK-DRIYCNHASFDNDYIHIDWPHSCKGTCSNQCG  149 (236)
T ss_dssp             HHCCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHH-T--TTSCG-GGEEEEEEECSSSBCEEECTTCCCTTCCSCCS
T ss_pred             cCCCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHH-h--cCCCC-CeEEeeeeEEcCCceEEecCCCCccccccccC
Confidence            35789999999999999999999999999999988888 5  77666 88888876653        7899984 54   


Q ss_pred             ----HHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 017995          135 ----EAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV  168 (362)
Q Consensus       135 ----~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i  168 (362)
                          .++++++++|++|+||||+.+|+.+|+++|+.++
T Consensus       150 ~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~  187 (236)
T 2fea_A          150 CCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFA  187 (236)
T ss_dssp             SCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEE
T ss_pred             CcHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeee
Confidence                8889999999999999999999999999999986

>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A

Probab=99.40  E-value=2.4e-14  Score=129.36  Aligned_cols=120  Identities=18%  Similarity=0.203  Sum_probs=98.6

Q ss_pred             CCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCc---EEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 017995           71 ALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS---VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS  147 (362)
Q Consensus        71 ~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~---~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~  147 (362)
                      ++|++.++|+.|+ +|+++ ++||.+.......+ ...++.++|+   .+++++++..+||+|+.|..+++++|++|++|
T Consensus       123 ~~~~~~~~l~~l~-~~~~~-i~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~  199 (259)
T 2ho4_A          123 HYQLLNQAFRLLL-DGAPL-IAIHKARYYKRKDG-LALGPGPFVTALEYATDTKAMVVGKPEKTFFLEALRDADCAPEEA  199 (259)
T ss_dssp             BHHHHHHHHHHHH-TTCCE-EESCCCSEEEETTE-EEECSHHHHHHHHHHHTCCCEECSTTSHHHHHHHGGGGTCCGGGE
T ss_pred             CHHHHHHHHHHHH-CCCEE-EEECCCCcCcccCC-cccCCcHHHHHHHHHhCCCceEecCCCHHHHHHHHHHcCCChHHE
Confidence            7889999999999 89999 99998877665555 6678887776   66778888899999999999999999999999


Q ss_pred             EEEecCH-hhHHHHHHcCCEEEEEcCCCCc-ccc---ccchhHhhcccccc
Q 017995          148 LVIEDSV-IGVVAGKAAGMEVVAVPSLPKQ-THR---YTAADEVINSLLDL  193 (362)
Q Consensus       148 l~igDs~-~d~~aA~~aG~~~i~v~~~~~~-~~~---~ssa~~vi~~l~el  193 (362)
                      ++|||+. +|+.+|+++|+.+++|.++... .+.   ...++.+++++.++
T Consensus       200 ~~iGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~l~~l  250 (259)
T 2ho4_A          200 VMIGDDCRDDVDGAQNIGMLGILVKTGKYKAADEEKINPPPYLTCESFPHA  250 (259)
T ss_dssp             EEEESCTTTTHHHHHHTTCEEEEESSTTCCTTGGGGSSSCCSEEESCHHHH
T ss_pred             EEECCCcHHHHHHHHHCCCcEEEECCCCCCcccccccCCCCCEEECCHHHH
Confidence            9999999 9999999999999999886321 111   12356666666653

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=99.37  E-value=3.4e-14  Score=129.60  Aligned_cols=121  Identities=13%  Similarity=0.157  Sum_probs=96.7

Q ss_pred             CCCCCchHHHHHHHHHHCCCcEEEEcCCChHhH--HHHHHhh-cCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCC
Q 017995           68 KVKALPGANRLIKHLSCHGVPMALASNSHRATI--ESKISYQ-HGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP  144 (362)
Q Consensus        68 ~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i--~~~L~~~-~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p  144 (362)
                      ...++|++.++|+.|+ +|+++ ++||++..+.  ...+ .. .++..+|+.+++++++..+||+|++|..++++  ++|
T Consensus       128 ~~~~~~~~~~~l~~L~-~g~~~-i~tn~~~~~~~~~~~l-~~~~~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~--~~~  202 (263)
T 1zjj_A          128 PDLTYEKLKYATLAIR-NGATF-IGTNPDATLPGEEGIY-PGAGSIIAALKVATNVEPIIIGKPNEPMYEVVREM--FPG  202 (263)
T ss_dssp             TTCBHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEE-ECHHHHHHHHHHHHCCCCEECSTTSHHHHHHHHHH--STT
T ss_pred             CCCCHHHHHHHHHHHH-CCCEE-EEECCCccccCCCCCc-CCcHHHHHHHHHHhCCCccEecCCCHHHHHHHHHh--CCc
Confidence            4578999999999999 89998 9999987654  2223 22 45666788888888888999999999999999  999


Q ss_pred             CcEEEEecCH-hhHHHHHHcCCEEEEEcCCCCccccc----cchhHhhcccccc
Q 017995          145 SSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRY----TAADEVINSLLDL  193 (362)
Q Consensus       145 ~~~l~igDs~-~d~~aA~~aG~~~i~v~~~~~~~~~~----ssa~~vi~~l~el  193 (362)
                      ++|+||||+. +|+.+|+++|+.+++|.++.......    ..++.++.++.++
T Consensus       203 ~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~p~~~~~~l~el  256 (263)
T 1zjj_A          203 EELWMVGDRLDTDIAFAKKFGMKAIMVLTGVSSLEDIKKSEYKPDLVLPSVYEL  256 (263)
T ss_dssp             CEEEEEESCTTTHHHHHHHTTCEEEEESSSSCCHHHHTTCSSCCSEEESSGGGG
T ss_pred             ccEEEECCChHHHHHHHHHcCCeEEEECCCCCChHHHHhcCCCCCEEECCHHHH
Confidence            9999999996 99999999999999998854322211    1356777777764

>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A

Probab=99.37  E-value=9.7e-14  Score=122.85  Aligned_cols=99  Identities=13%  Similarity=0.114  Sum_probs=82.9

Q ss_pred             CCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCC---CCCCCCCCHHHHHHHHHHcCCCCC
Q 017995           69 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD---EVRTGKPSPDIFLEAAKRLNMEPS  145 (362)
Q Consensus        69 ~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~---d~~~gKp~p~~~~~~~~~~~~~p~  145 (362)
                      ..++||+.++|+.|+++|++++|+||++...++..+ +.  +.++|+.++.+.   ++...||+|+.|..+++++++   
T Consensus        87 ~~~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l-~~--l~~~f~~i~~~~~~~~~~~~KP~p~~~~~~~~~~g~---  160 (211)
T 2b82_A           87 SIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVS-KT--LADNFHIPATNMNPVIFAGDKPGQNTKSQWLQDKNI---  160 (211)
T ss_dssp             CEECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHH-HH--HHHHTTCCTTTBCCCEECCCCTTCCCSHHHHHHTTE---
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHH-HH--HHHhcCccccccchhhhcCCCCCHHHHHHHHHHCCC---
Confidence            346789999999999999999999999877666555 44  455677664332   345689999999999999998   


Q ss_pred             cEEEEecCHhhHHHHHHcCCEEEEEcCCC
Q 017995          146 SSLVIEDSVIGVVAGKAAGMEVVAVPSLP  174 (362)
Q Consensus       146 ~~l~igDs~~d~~aA~~aG~~~i~v~~~~  174 (362)
                       |+||||+..|+++|+++|+.++++.++.
T Consensus       161 -~l~VGDs~~Di~aA~~aG~~~i~v~~g~  188 (211)
T 2b82_A          161 -RIFYGDSDNDITAARDVGARGIRILRAS  188 (211)
T ss_dssp             -EEEEESSHHHHHHHHHTTCEEEECCCCT
T ss_pred             -EEEEECCHHHHHHHHHCCCeEEEEecCC
Confidence             9999999999999999999999998754

>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}

Probab=99.36  E-value=1.3e-12  Score=110.00  Aligned_cols=90  Identities=18%  Similarity=0.206  Sum_probs=79.1

Q ss_pred             CCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEE
Q 017995           71 ALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVI  150 (362)
Q Consensus        71 ~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~i  150 (362)
                      ..|++.++|+.|+++|++++|+||++...++..+ +.+|+..+|+.         +||+|+.+..++++++++|++|+||
T Consensus        37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l-~~~gl~~~~~~---------~kp~~~~~~~~~~~~~~~~~~~~~v  106 (162)
T 2p9j_A           37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRL-KELGVEEIYTG---------SYKKLEIYEKIKEKYSLKDEEIGFI  106 (162)
T ss_dssp             EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHH-HHTTCCEEEEC---------C--CHHHHHHHHHHTTCCGGGEEEE
T ss_pred             ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHH-HHcCCHhhccC---------CCCCHHHHHHHHHHcCCCHHHEEEE
Confidence            3467889999999999999999999999999888 88898665542         7999999999999999999999999


Q ss_pred             ecCHhhHHHHHHcCCEEEEE
Q 017995          151 EDSVIGVVAGKAAGMEVVAV  170 (362)
Q Consensus       151 gDs~~d~~aA~~aG~~~i~v  170 (362)
                      ||+.+|+.+|+++|+.+++.
T Consensus       107 GD~~~Di~~a~~ag~~~~~~  126 (162)
T 2p9j_A          107 GDDVVDIEVMKKVGFPVAVR  126 (162)
T ss_dssp             ECSGGGHHHHHHSSEEEECT
T ss_pred             CCCHHHHHHHHHCCCeEEec
Confidence            99999999999999997644

>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}

Probab=99.35  E-value=9.8e-13  Score=128.09  Aligned_cols=102  Identities=16%  Similarity=0.169  Sum_probs=90.8

Q ss_pred             cCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEE-------e---CCCCCCCCCCHHHHHHH
Q 017995           67 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIV-------G---SDEVRTGKPSPDIFLEA  136 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv-------~---~~d~~~gKp~p~~~~~~  136 (362)
                      ...+++||+.++|+.|+++|++++|+||++..+++..+ +.+|+..+|...+       +   ..+...+||+|+.|..+
T Consensus       253 ~~~~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~-~~lgl~~~~~~~l~~~dg~~tg~~~~~v~~~kpk~~~~~~~  331 (415)
T 3p96_A          253 GQLELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLA-EELMLDYVAANELEIVDGTLTGRVVGPIIDRAGKATALREF  331 (415)
T ss_dssp             HHCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HHTTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHH
T ss_pred             HhCccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHH-HHcCccceeeeeEEEeCCEEEeeEccCCCCCcchHHHHHHH
Confidence            45789999999999999999999999999999999888 8899987766432       2   23555689999999999


Q ss_pred             HHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEE
Q 017995          137 AKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA  169 (362)
Q Consensus       137 ~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~  169 (362)
                      ++++|++|++|++|||+.+|+.+|+++|+.+++
T Consensus       332 ~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~  364 (415)
T 3p96_A          332 AQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF  364 (415)
T ss_dssp             HHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred             HHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE
Confidence            999999999999999999999999999998876

>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A

Probab=99.35  E-value=2.7e-14  Score=124.67  Aligned_cols=141  Identities=13%  Similarity=0.195  Sum_probs=106.5

Q ss_pred             CHHHHHHHHHHHHHHcCCCCCHHHHHhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhh--hcCCCCCchHHHHH
Q 017995            2 TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH--LCKVKALPGANRLI   79 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~pgv~~~L   79 (362)
                      |+..+.++|+++++.+ ..++.+.+   .+.+..+.+..    .. + .  .. ..+.+.|.+.  ....+++||+.++|
T Consensus        18 s~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~----~~-~-~--~~-~~~~~~~~~~~~~~~~~~~~g~~e~L   84 (197)
T 1q92_A           18 FEGGFLRKFRARFPDQ-PFIALEDR---RGFWVSEQYGR----LR-P-G--LS-EKAISIWESKNFFFELEPLPGAVEAV   84 (197)
T ss_dssp             HHHHHHHHHHHHCTTS-CCCCGGGC---CSSCHHHHHHH----HS-T-T--HH-HHHHHHHTSTTTTTTCCBCTTHHHHH
T ss_pred             CcHHHHHHHHHHHhcC-CCCCHHHh---cCCcHHHHHHh----cC-H-H--HH-HHHHHHHHhhhhhhcCCcCcCHHHHH
Confidence            4678889999998877 34454443   34455554433    21 1 1  11 2223444432  24688999999999


Q ss_pred             HHHHHC-CCcEEEEcCCChHhHHHHHHhhcCCcC-CCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhh-
Q 017995           80 KHLSCH-GVPMALASNSHRATIESKISYQHGWNE-SFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG-  156 (362)
Q Consensus        80 ~~L~~~-g~~~~i~S~~~~~~i~~~L~~~~gl~~-~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d-  156 (362)
                      +.|+++ |++++|+||++...++..+ +++++.+ +|+                  ..++++++++|++|+||||+..| 
T Consensus        85 ~~L~~~~g~~~~ivT~~~~~~~~~~l-~~~~l~~~~f~------------------~~~~~~l~~~~~~~~~vgDs~~dD  145 (197)
T 1q92_A           85 KEMASLQNTDVFICTSPIKMFKYCPY-EKYAWVEKYFG------------------PDFLEQIVLTRDKTVVSADLLIDD  145 (197)
T ss_dssp             HHHHHSTTEEEEEEECCCSCCSSHHH-HHHHHHHHHHC------------------GGGGGGEEECSCSTTSCCSEEEES
T ss_pred             HHHHhcCCCeEEEEeCCccchHHHHH-HHhchHHHhch------------------HHHHHHhccCCccEEEECcccccC
Confidence            999999 9999999999998888788 7788877 775                  55778899999999999999999 


Q ss_pred             ---HHHHH-HcCCEEEEEcCCC
Q 017995          157 ---VVAGK-AAGMEVVAVPSLP  174 (362)
Q Consensus       157 ---~~aA~-~aG~~~i~v~~~~  174 (362)
                         +.+|+ ++|+.++++.+..
T Consensus       146 ~~~~~~a~~~aG~~~i~~~~~~  167 (197)
T 1q92_A          146 RPDITGAEPTPSWEHVLFTACH  167 (197)
T ss_dssp             CSCCCCSCSSCSSEEEEECCTT
T ss_pred             CchhhhcccCCCceEEEecCcc
Confidence               99999 9999999998754

>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}

Probab=99.34  E-value=1.4e-12  Score=123.32  Aligned_cols=102  Identities=22%  Similarity=0.230  Sum_probs=91.5

Q ss_pred             cCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEE----------eCCCCCCCCCCHHHHHHH
Q 017995           67 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIV----------GSDEVRTGKPSPDIFLEA  136 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv----------~~~d~~~gKp~p~~~~~~  136 (362)
                      ...+++||+.++|+.|+++|++++++|++...+++..+ +++|+..+|+..+          ..++...+||+|+.+..+
T Consensus       175 ~~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~-~~lgl~~~~~~~l~~~d~~~tg~~~~~~~~~kpk~~~~~~~  253 (335)
T 3n28_A          175 ETLPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLK-EQLSLDYAQSNTLEIVSGKLTGQVLGEVVSAQTKADILLTL  253 (335)
T ss_dssp             TTCCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HHHTCSEEEEEEEEEETTEEEEEEESCCCCHHHHHHHHHHH
T ss_pred             HhCCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH-HHcCCCeEEeeeeEeeCCeeeeeecccccChhhhHHHHHHH
Confidence            45789999999999999999999999999999998888 8899988777542          223566789999999999


Q ss_pred             HHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEE
Q 017995          137 AKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA  169 (362)
Q Consensus       137 ~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~  169 (362)
                      ++++|++|++|++|||+.+|+.+|+.+|+.+++
T Consensus       254 ~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~  286 (335)
T 3n28_A          254 AQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY  286 (335)
T ss_dssp             HHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred             HHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe
Confidence            999999999999999999999999999998876

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*

Probab=99.31  E-value=9.4e-14  Score=129.59  Aligned_cols=124  Identities=18%  Similarity=0.284  Sum_probs=98.9

Q ss_pred             CCCCCchHHHHHHHHHHCCCcEEEEcCCChHhH--H-HHHHhhcC-CcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCC
Q 017995           68 KVKALPGANRLIKHLSCHGVPMALASNSHRATI--E-SKISYQHG-WNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME  143 (362)
Q Consensus        68 ~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i--~-~~L~~~~g-l~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~  143 (362)
                      ...++|++.++|+.|++.|+ ++++||.+....  . ..+ ...| +..+|+.+++++++..+||+|..|..+++++|++
T Consensus       154 ~~~~~~~~~~~l~~l~~~g~-~~i~tn~~~~~~~~~~~~~-~~~g~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgi~  231 (306)
T 2oyc_A          154 EHFSFAKLREACAHLRDPEC-LLVATDRDPWHPLSDGSRT-PGTGSLAAAVETASGRQALVVGKPSPYMFECITENFSID  231 (306)
T ss_dssp             TTCCHHHHHHHHHHHTSTTS-EEEESCCCCEEECTTSCEE-ECHHHHHHHHHHHHTCCCEECSTTSTHHHHHHHHHSCCC
T ss_pred             CCCCHHHHHHHHHHHHcCCC-EEEEEcCCccccCCCCCcC-CCCcHHHHHHHHHhCCCceeeCCCCHHHHHHHHHHcCCC
Confidence            34678999999999999998 999999987654  1 122 3334 5567788888888889999999999999999999


Q ss_pred             CCcEEEEecCH-hhHHHHHHcCCEEEEEcCCCCccccc----------cchhHhhcccccc
Q 017995          144 PSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRY----------TAADEVINSLLDL  193 (362)
Q Consensus       144 p~~~l~igDs~-~d~~aA~~aG~~~i~v~~~~~~~~~~----------ssa~~vi~~l~el  193 (362)
                      |++|+||||+. +|+.+|+++|+.+++|.++.......          ..++.++.++.++
T Consensus       232 ~~e~l~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~pd~vi~~l~el  292 (306)
T 2oyc_A          232 PARTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADL  292 (306)
T ss_dssp             GGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCHHHHHHHHHTTCGGGSCSEEESSGGGG
T ss_pred             hHHEEEECCCchHHHHHHHHCCCeEEEECCCCCCHHHHHhhhcccccCCCCCEEECCHHHH
Confidence            99999999997 99999999999999998864322111          2356677777664

>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}

Probab=99.28  E-value=4.4e-12  Score=110.53  Aligned_cols=124  Identities=15%  Similarity=0.113  Sum_probs=92.5

Q ss_pred             CCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCc--CCCcE-EEe-CCC----CCCCCCCHHHHHHHHH-
Q 017995           68 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN--ESFSV-IVG-SDE----VRTGKPSPDIFLEAAK-  138 (362)
Q Consensus        68 ~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~--~~f~~-iv~-~~d----~~~gKp~p~~~~~~~~-  138 (362)
                      ...++||+.++|+.|+++|++++++|+++...++..+ +.+|+.  .+|.. ++. .+.    +...||+++.+..++. 
T Consensus        80 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  158 (219)
T 3kd3_A           80 PNLLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFA-DYLNIPRENIFAVETIWNSDGSFKELDNSNGACDSKLSAFDK  158 (219)
T ss_dssp             TTTBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HHHTCCGGGEEEEEEEECTTSBEEEEECTTSTTTCHHHHHHH
T ss_pred             cccCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHH-HHcCCCcccEEEeeeeecCCCceeccCCCCCCcccHHHHHHH
Confidence            4568999999999999999999999999999999888 888884  35543 333 333    2457888877666665 


Q ss_pred             HcCCCCCcEEEEecCHhhHHHHHHcCCEEEEEcCCCCccc--cccchhHhhcccccc
Q 017995          139 RLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH--RYTAADEVINSLLDL  193 (362)
Q Consensus       139 ~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~~~~~~~~--~~ssa~~vi~~l~el  193 (362)
                      .+|++|++|++|||+.+|+.++ ++|+.++++........  ....++.++.++.++
T Consensus       159 ~~~~~~~~~~~vGD~~~Di~~~-~~G~~~~~v~~~~~~~~~~~~~~ad~v~~~~~el  214 (219)
T 3kd3_A          159 AKGLIDGEVIAIGDGYTDYQLY-EKGYATKFIAYMEHIEREKVINLSKYVARNVAEL  214 (219)
T ss_dssp             HGGGCCSEEEEEESSHHHHHHH-HHTSCSEEEEECSSCCCHHHHHHCSEEESSHHHH
T ss_pred             HhCCCCCCEEEEECCHhHHHHH-hCCCCcEEEeccCccccHHHHhhcceeeCCHHHH
Confidence            4599999999999999999998 68998777765332211  122356666666553

>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I

Probab=99.26  E-value=5.6e-12  Score=116.56  Aligned_cols=150  Identities=13%  Similarity=0.191  Sum_probs=104.2

Q ss_pred             HHHHHHHHHHHHcCCCC-CHHHHHhhcCCCHHH--H---HHHHHHHhCCCCCHHHHHHHHHHHHHh------------h-
Q 017995            5 MFSEVLKTFLVKYGKEW-DGREKHKIVGKTPLE--E---AAIIVEDYGLPCAKHEFVNEVYSMFSD------------H-   65 (362)
Q Consensus         5 ~~~~a~~~~l~~~g~~~-~~~~~~~~~g~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~-   65 (362)
                      -...|+.++++++|++. +.+.+..+.|.+...  .   ...+....+.+.+ +.+ ..+.+.+..            . 
T Consensus        77 p~~~a~~~~~~~~g~~~~~~~~~~~~~G~~~~~~~~~~g~~~~~~~~~~~~~-~~~-~~~~~~~~~~g~~~i~~~~d~~~  154 (287)
T 3a1c_A           77 PIAEAIVKKALEHGIELGEPEKVEVIAGEGVVADGILVGNKRLMEDFGVAVS-NEV-ELALEKLEREAKTAVIVARNGRV  154 (287)
T ss_dssp             HHHHHHHHHHHHTTCCCCCCSCEEEETTTEEEETTEEEECHHHHHHTTCCCC-HHH-HHHHHHHHHTTCEEEEEEETTEE
T ss_pred             HHHHHHHHHHHhcCCCccccccceeecCCCeEEEEEEECCHHHHHhcCCCcc-HHH-HHHHHHHHhCCCeEEEEEECCEE
Confidence            34589999999999874 445555555554322  0   0011122233221 112 112222221            1 


Q ss_pred             ----hcCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcC
Q 017995           66 ----LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN  141 (362)
Q Consensus        66 ----~~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~  141 (362)
                          ....+++||+.++|+.|+++|++++|+|+++...++..+ +.+|+..+|+.++         |.  ....++++++
T Consensus       155 ~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l-~~~gl~~~f~~i~---------~~--~K~~~~~~l~  222 (287)
T 3a1c_A          155 EGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAIS-RELNLDLVIAEVL---------PH--QKSEEVKKLQ  222 (287)
T ss_dssp             EEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHHTCSEEECSCC---------TT--CHHHHHHHHT
T ss_pred             EEEEEeccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HHhCCceeeeecC---------hH--HHHHHHHHHh
Confidence                124689999999999999999999999999999999888 8889988777654         11  2267888999


Q ss_pred             CCCCcEEEEecCHhhHHHHHHcCCEEEE
Q 017995          142 MEPSSSLVIEDSVIGVVAGKAAGMEVVA  169 (362)
Q Consensus       142 ~~p~~~l~igDs~~d~~aA~~aG~~~i~  169 (362)
                      .. ++|+||||+.+|+.+|+++|+.+.+
T Consensus       223 ~~-~~~~~vGDs~~Di~~a~~ag~~v~~  249 (287)
T 3a1c_A          223 AK-EVVAFVGDGINDAPALAQADLGIAV  249 (287)
T ss_dssp             TT-CCEEEEECTTTCHHHHHHSSEEEEE
T ss_pred             cC-CeEEEEECCHHHHHHHHHCCeeEEe
Confidence            99 9999999999999999999998433

>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*

Probab=99.26  E-value=1.3e-11  Score=107.10  Aligned_cols=100  Identities=18%  Similarity=0.250  Sum_probs=84.2

Q ss_pred             CCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCC----------CCCCCCCHHHHHHHH
Q 017995           68 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDE----------VRTGKPSPDIFLEAA  137 (362)
Q Consensus        68 ~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d----------~~~gKp~p~~~~~~~  137 (362)
                      ...+.||+.++|+.|+++|++++++|+++...++..+ +.+++..+|+.++...+          ...++++|..+..++
T Consensus        74 ~~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~  152 (211)
T 1l7m_A           74 RITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIK-EKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIA  152 (211)
T ss_dssp             TCCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHH-HHHTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHH
T ss_pred             hCCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHH-HHcCCCeEEEeeeEEECCEEcCCcccCccCCccHHHHHHHHH
Confidence            4678899999999999999999999999988887777 77888777665443222          123556789999999


Q ss_pred             HHcCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 017995          138 KRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV  168 (362)
Q Consensus       138 ~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i  168 (362)
                      +++|++|++|++|||+.+|+.+|+.+|+.++
T Consensus       153 ~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~  183 (211)
T 1l7m_A          153 KIEGINLEDTVAVGDGANDISMFKKAGLKIA  183 (211)
T ss_dssp             HHHTCCGGGEEEEECSGGGHHHHHHCSEEEE
T ss_pred             HHcCCCHHHEEEEecChhHHHHHHHCCCEEE
Confidence            9999999999999999999999999999854

>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*

Probab=99.24  E-value=7.4e-12  Score=105.60  Aligned_cols=83  Identities=13%  Similarity=0.089  Sum_probs=75.7

Q ss_pred             HHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhH
Q 017995           78 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV  157 (362)
Q Consensus        78 ~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~  157 (362)
                      +|+.|+++|++++++||.+...++..+ +++|+..+|+.         .||+|+.+..++++++++|++|+||||+.+|+
T Consensus        39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~-~~~gl~~~~~~---------~kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di  108 (164)
T 3e8m_A           39 GIFWAHNKGIPVGILTGEKTEIVRRRA-EKLKVDYLFQG---------VVDKLSAAEELCNELGINLEQVAYIGDDLNDA  108 (164)
T ss_dssp             HHHHHHHTTCCEEEECSSCCHHHHHHH-HHTTCSEEECS---------CSCHHHHHHHHHHHHTCCGGGEEEECCSGGGH
T ss_pred             HHHHHHHCCCEEEEEeCCChHHHHHHH-HHcCCCEeecc---------cCChHHHHHHHHHHcCCCHHHEEEECCCHHHH
Confidence            799999999999999999999999888 88998665543         39999999999999999999999999999999


Q ss_pred             HHHHHcCCEEEEE
Q 017995          158 VAGKAAGMEVVAV  170 (362)
Q Consensus       158 ~aA~~aG~~~i~v  170 (362)
                      .+|+++|+.++..
T Consensus       109 ~~~~~ag~~~~~~  121 (164)
T 3e8m_A          109 KLLKRVGIAGVPA  121 (164)
T ss_dssp             HHHTTSSEEECCT
T ss_pred             HHHHHCCCeEEcC
Confidence            9999999987654

>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*

Probab=99.23  E-value=4.3e-13  Score=122.30  Aligned_cols=121  Identities=16%  Similarity=0.161  Sum_probs=92.4

Q ss_pred             CCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHH---HHHhhcCCcCCCcEEEeCCC-CCCCCCCHHHHHHHHHHcCCCC
Q 017995           69 VKALPGANRLIKHLSCHGVPMALASNSHRATIES---KISYQHGWNESFSVIVGSDE-VRTGKPSPDIFLEAAKRLNMEP  144 (362)
Q Consensus        69 ~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~---~L~~~~gl~~~f~~iv~~~d-~~~gKp~p~~~~~~~~~~~~~p  144 (362)
                      ..++|++.++++.| ..|+++ ++||.+......   .+ +..++..+|+.++++++ +..+||+|..|..+++++|++|
T Consensus       136 ~~~~~~~~~~l~~l-~~~~~~-i~tn~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~  212 (271)
T 1vjr_A          136 TLTYERLKKACILL-RKGKFY-IATHPDINCPSKEGPVP-DAGSIMAAIEASTGRKPDLIAGKPNPLVVDVISEKFGVPK  212 (271)
T ss_dssp             TCCHHHHHHHHHHH-TTTCEE-EESCCCSEECCTTSCEE-CHHHHHHHHHHHHSCCCSEECSTTSTHHHHHHHHHHTCCG
T ss_pred             CcCHHHHHHHHHHH-HCCCeE-EEECCCccccCCCCccc-cccHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHHhCCCC
Confidence            45788999999999 788988 899886543221   11 22344556677777787 8899999999999999999999


Q ss_pred             CcEEEEecCH-hhHHHHHHcCCEEEEEcCCCCccccc----cchhHhhccccc
Q 017995          145 SSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRY----TAADEVINSLLD  192 (362)
Q Consensus       145 ~~~l~igDs~-~d~~aA~~aG~~~i~v~~~~~~~~~~----ssa~~vi~~l~e  192 (362)
                      ++|++|||+. +|+.+|+.+|+.+++|.++.......    ..++.+++++.+
T Consensus       213 ~e~i~iGD~~~nDi~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~i~~l~e  265 (271)
T 1vjr_A          213 ERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGE  265 (271)
T ss_dssp             GGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHH
T ss_pred             ceEEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHhhcCCCCCEEECCHHH
Confidence            9999999995 99999999999999998864322111    134556666555

>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A

Probab=99.19  E-value=2.6e-11  Score=104.33  Aligned_cols=118  Identities=19%  Similarity=0.088  Sum_probs=88.5

Q ss_pred             hhhcCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCC-CCCCCHHHHHHHHHHcCC
Q 017995           64 DHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR-TGKPSPDIFLEAAKRLNM  142 (362)
Q Consensus        64 ~~~~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~-~gKp~p~~~~~~~~~~~~  142 (362)
                      .......++||+.++|+.|+++|++++++|+++...++..  +.+|+..+++.+++.++.. ..+|.+.....+++++  
T Consensus        73 ~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~l~~l--  148 (201)
T 4ap9_A           73 RTREKVNVSPEARELVETLREKGFKVVLISGSFEEVLEPF--KELGDEFMANRAIFEDGKFQGIRLRFRDKGEFLKRF--  148 (201)
T ss_dssp             HGGGGCCCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG--TTTSSEEEEEEEEEETTEEEEEECCSSCHHHHHGGG--
T ss_pred             HHHHhCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH--HHcCchhheeeEEeeCCceECCcCCccCHHHHHHhc--
Confidence            3345679999999999999999999999999988876654  6778877766666554332 2356665566777777  


Q ss_pred             CCCcEEEEecCHhhHHHHHHcCCEEEEEcCCCCccccccchhHhhccccc
Q 017995          143 EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD  192 (362)
Q Consensus       143 ~p~~~l~igDs~~d~~aA~~aG~~~i~v~~~~~~~~~~ssa~~vi~~l~e  192 (362)
                      +|++|++|||+.+|+.+|+.+|+.+++.+. ..      .++.++.++.+
T Consensus       149 ~~~~~i~iGD~~~Di~~~~~ag~~v~~~~~-~~------~ad~v~~~~~e  191 (201)
T 4ap9_A          149 RDGFILAMGDGYADAKMFERADMGIAVGRE-IP------GADLLVKDLKE  191 (201)
T ss_dssp             TTSCEEEEECTTCCHHHHHHCSEEEEESSC-CT------TCSEEESSHHH
T ss_pred             CcCcEEEEeCCHHHHHHHHhCCceEEECCC-Cc------cccEEEccHHH
Confidence            899999999999999999999998544333 22      33555555555

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}

Probab=99.17  E-value=1.6e-12  Score=113.44  Aligned_cols=97  Identities=11%  Similarity=0.096  Sum_probs=89.4

Q ss_pred             CCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEE
Q 017995           69 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL  148 (362)
Q Consensus        69 ~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l  148 (362)
                      +.++||+.++|+.|++. ++++|+|++.+.+++.++ +.+++..+|+.+++++++..+|   +.|..+++++|.++++|+
T Consensus        67 v~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl-~~ld~~~~f~~~l~rd~~~~~k---~~~lK~L~~Lg~~~~~~v  141 (195)
T 2hhl_A           67 VLKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVA-DLLDRWGVFRARLFRESCVFHR---GNYVKDLSRLGRELSKVI  141 (195)
T ss_dssp             EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHH-HHHCCSSCEEEEECGGGCEEET---TEEECCGGGSSSCGGGEE
T ss_pred             EEeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHH-HHhCCcccEEEEEEcccceecC---CceeeeHhHhCCChhHEE
Confidence            57899999999999998 999999999999999999 8999999999999999998776   568888999999999999


Q ss_pred             EEecCHhhHHHHHHcCCEEEEE
Q 017995          149 VIEDSVIGVVAGKAAGMEVVAV  170 (362)
Q Consensus       149 ~igDs~~d~~aA~~aG~~~i~v  170 (362)
                      +|||+..++.++.++|+.++..
T Consensus       142 ivDDs~~~~~~~~~ngi~i~~~  163 (195)
T 2hhl_A          142 IVDNSPASYIFHPENAVPVQSW  163 (195)
T ss_dssp             EEESCGGGGTTCGGGEEECCCC
T ss_pred             EEECCHHHhhhCccCccEEeee
Confidence            9999999999999999987544

>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0

Probab=99.16  E-value=5.2e-11  Score=103.50  Aligned_cols=81  Identities=16%  Similarity=0.238  Sum_probs=74.4

Q ss_pred             HHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhH
Q 017995           78 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV  157 (362)
Q Consensus        78 ~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~  157 (362)
                      .|+.|+++|++++|+||.+...++..+ +.+|+..+|+.+         ||+|+.+..++++++++|++|+||||+.+|+
T Consensus        54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l-~~lgl~~~~~~~---------kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di  123 (191)
T 3n1u_A           54 GLKLLMAAGIQVAIITTAQNAVVDHRM-EQLGITHYYKGQ---------VDKRSAYQHLKKTLGLNDDEFAYIGDDLPDL  123 (191)
T ss_dssp             HHHHHHHTTCEEEEECSCCSHHHHHHH-HHHTCCEEECSC---------SSCHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred             HHHHHHHCCCeEEEEeCcChHHHHHHH-HHcCCccceeCC---------CChHHHHHHHHHHhCCCHHHEEEECCCHHHH
Confidence            499999999999999999999999888 888987655533         9999999999999999999999999999999


Q ss_pred             HHHHHcCCEEE
Q 017995          158 VAGKAAGMEVV  168 (362)
Q Consensus       158 ~aA~~aG~~~i  168 (362)
                      .+++.+|+.++
T Consensus       124 ~~~~~ag~~~~  134 (191)
T 3n1u_A          124 PLIQQVGLGVA  134 (191)
T ss_dssp             HHHHHSSEEEE
T ss_pred             HHHHHCCCEEE
Confidence            99999999984

>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A

Probab=99.16  E-value=4.3e-11  Score=103.77  Aligned_cols=82  Identities=17%  Similarity=0.178  Sum_probs=74.7

Q ss_pred             HHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhH
Q 017995           78 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV  157 (362)
Q Consensus        78 ~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~  157 (362)
                      +|+.|+++|++++|+|+++...++..+ +.+|+.++|+.+         +++|+.+..+++++|++|++|+||||+.+|+
T Consensus        54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~-~~lgl~~~f~~~---------~~K~~~~~~~~~~~g~~~~~~~~vGD~~nDi  123 (189)
T 3mn1_A           54 GIKMLIASGVTTAIISGRKTAIVERRA-KSLGIEHLFQGR---------EDKLVVLDKLLAELQLGYEQVAYLGDDLPDL  123 (189)
T ss_dssp             HHHHHHHTTCEEEEECSSCCHHHHHHH-HHHTCSEEECSC---------SCHHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred             HHHHHHHCCCEEEEEECcChHHHHHHH-HHcCCHHHhcCc---------CChHHHHHHHHHHcCCChhHEEEECCCHHHH
Confidence            899999999999999999999999888 889997766643         6667999999999999999999999999999


Q ss_pred             HHHHHcCCEEEE
Q 017995          158 VAGKAAGMEVVA  169 (362)
Q Consensus       158 ~aA~~aG~~~i~  169 (362)
                      .+|+++|+.++.
T Consensus       124 ~~~~~ag~~~~~  135 (189)
T 3mn1_A          124 PVIRRVGLGMAV  135 (189)
T ss_dssp             HHHHHSSEEEEC
T ss_pred             HHHHHCCCeEEe
Confidence            999999998754

>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*

Probab=99.16  E-value=6.2e-11  Score=101.82  Aligned_cols=90  Identities=16%  Similarity=0.115  Sum_probs=80.0

Q ss_pred             CCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEE
Q 017995           71 ALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVI  150 (362)
Q Consensus        71 ~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~i  150 (362)
                      +.+...++|+.|+++|++++++|+.+...++..+ +.+|+..+|+         ..||+|+.+..++++++++|++|++|
T Consensus        36 ~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~-~~lgl~~~~~---------~~k~k~~~~~~~~~~~~~~~~~~~~v  105 (180)
T 1k1e_A           36 FHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRI-ADLGIKLFFL---------GKLEKETACFDLMKQAGVTAEQTAYI  105 (180)
T ss_dssp             EEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHH-HHHTCCEEEE---------SCSCHHHHHHHHHHHHTCCGGGEEEE
T ss_pred             eccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHH-HHcCCceeec---------CCCCcHHHHHHHHHHcCCCHHHEEEE
Confidence            3456789999999999999999999999999888 8889865542         25999999999999999999999999


Q ss_pred             ecCHhhHHHHHHcCCEEEEE
Q 017995          151 EDSVIGVVAGKAAGMEVVAV  170 (362)
Q Consensus       151 gDs~~d~~aA~~aG~~~i~v  170 (362)
                      ||+.+|+.+++.+|+.+++.
T Consensus       106 GD~~~Di~~~~~ag~~~~~~  125 (180)
T 1k1e_A          106 GDDSVDLPAFAACGTSFAVA  125 (180)
T ss_dssp             ECSGGGHHHHHHSSEEEECT
T ss_pred             CCCHHHHHHHHHcCCeEEeC
Confidence            99999999999999998754

>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}

Probab=99.15  E-value=3.4e-11  Score=106.45  Aligned_cols=84  Identities=15%  Similarity=0.186  Sum_probs=76.0

Q ss_pred             HHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhH
Q 017995           78 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV  157 (362)
Q Consensus        78 ~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~  157 (362)
                      +|+.|+++|++++|+|+++...++..+ +.+|+..+|+.+         ||+|+.+..+++++|++|++|+||||+.+|+
T Consensus        84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l-~~lgi~~~f~~~---------k~K~~~l~~~~~~lg~~~~~~~~vGDs~nDi  153 (211)
T 3ij5_A           84 GIRCLITSDIDVAIITGRRAKLLEDRA-NTLGITHLYQGQ---------SDKLVAYHELLATLQCQPEQVAYIGDDLIDW  153 (211)
T ss_dssp             HHHHHHHTTCEEEEECSSCCHHHHHHH-HHHTCCEEECSC---------SSHHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred             HHHHHHHCCCEEEEEeCCCHHHHHHHH-HHcCCchhhccc---------CChHHHHHHHHHHcCcCcceEEEEcCCHHHH
Confidence            899999999999999999999999888 889997665532         8889999999999999999999999999999


Q ss_pred             HHHHHcCCEEEEEc
Q 017995          158 VAGKAAGMEVVAVP  171 (362)
Q Consensus       158 ~aA~~aG~~~i~v~  171 (362)
                      .+++++|+.++...
T Consensus       154 ~~~~~ag~~~a~~~  167 (211)
T 3ij5_A          154 PVMAQVGLSVAVAD  167 (211)
T ss_dssp             HHHTTSSEEEECTT
T ss_pred             HHHHHCCCEEEeCC
Confidence            99999999876543

>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*

Probab=99.14  E-value=6e-11  Score=102.69  Aligned_cols=83  Identities=13%  Similarity=0.203  Sum_probs=75.0

Q ss_pred             HHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhH
Q 017995           78 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV  157 (362)
Q Consensus        78 ~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~  157 (362)
                      +|+.|+++|++++|+||.+...++..+ +.+|+..+|+         .+||+|+.+..+++++|++|++|+||||+.+|+
T Consensus        61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l-~~lgl~~~~~---------~~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di  130 (188)
T 2r8e_A           61 GIRCALTSDIEVAIITGRKAKLVEDRC-ATLGITHLYQ---------GQSNKLIAFSDLLEKLAIAPENVAYVGDDLIDW  130 (188)
T ss_dssp             HHHHHHTTTCEEEEECSSCCHHHHHHH-HHHTCCEEEC---------SCSCSHHHHHHHHHHHTCCGGGEEEEESSGGGH
T ss_pred             HHHHHHHCCCeEEEEeCCChHHHHHHH-HHcCCceeec---------CCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHH
Confidence            799999999999999999999998888 8888865443         369999999999999999999999999999999


Q ss_pred             HHHHHcCCEEEEE
Q 017995          158 VAGKAAGMEVVAV  170 (362)
Q Consensus       158 ~aA~~aG~~~i~v  170 (362)
                      .+|+++|+.+++.
T Consensus       131 ~~a~~ag~~~~~~  143 (188)
T 2r8e_A          131 PVMEKVGLSVAVA  143 (188)
T ss_dssp             HHHTTSSEEEECT
T ss_pred             HHHHHCCCEEEec
Confidence            9999999998654

>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*

Probab=99.14  E-value=2.5e-12  Score=117.18  Aligned_cols=153  Identities=12%  Similarity=0.126  Sum_probs=102.6

Q ss_pred             CHHHHHHHHHHHHHHcCCCCC-HHHHHhhcCCCHHHHH---------HHHHHHhCCCCCHHHHHHHHHHHHHhhh-----
Q 017995            2 TDGMFSEVLKTFLVKYGKEWD-GREKHKIVGKTPLEEA---------AIIVEDYGLPCAKHEFVNEVYSMFSDHL-----   66 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~~~-~~~~~~~~g~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----   66 (362)
                      |++.+..++.++++.+|++.. .+.+..+.|......+         ..+....+.... +.+ ..+........     
T Consensus        55 s~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~  132 (280)
T 3skx_A           55 SEHPIAAAIVEEAEKRGFGLTEVEEFRAIPGKGVEGIVNGRRYMVVSPGYIRELGIKTD-ESV-EKLKQQGKTVVFILKN  132 (280)
T ss_dssp             CCSHHHHHHHHHHHHTTCCCCCCEEEEEETTTEEEEEETTEEEEEECHHHHHHTTCCCC-TTH-HHHHTTTCEEEEEEET
T ss_pred             CCCHHHHHHHHHHHhcCCCCCCccceeecCCCEEEEEECCEEEEEecHHHHHHcCCCch-HHH-HHHHhCCCeEEEEEEC
Confidence            567788999999999998653 3344444444322111         122333443322 111 11111110000     


Q ss_pred             c--------CCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHH
Q 017995           67 C--------KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAK  138 (362)
Q Consensus        67 ~--------~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~  138 (362)
                      .        ..+++||+.++|+.|+++|++++++|+.+...++..+ +.+|+.++|+.+++++.....||.|+.+     
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~-~~~gl~~~f~~~~~~~k~~~~k~~~~~~-----  206 (280)
T 3skx_A          133 GEVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVA-EELGLDDYFAEVLPHEKAEKVKEVQQKY-----  206 (280)
T ss_dssp             TEEEEEEEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHHTCSEEECSCCGGGHHHHHHHHHTTS-----
T ss_pred             CEEEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-HHcCChhHhHhcCHHHHHHHHHHHHhcC-----
Confidence            0        0178999999999999999999999999999999888 8899999999888776554445544432     


Q ss_pred             HcCCCCCcEEEEecCHhhHHHHHHcCCEEEE
Q 017995          139 RLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA  169 (362)
Q Consensus       139 ~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~  169 (362)
                             +|+||||+.+|+.+|+.+|+.+.+
T Consensus       207 -------~~~~vGD~~nDi~~~~~Ag~~va~  230 (280)
T 3skx_A          207 -------VTAMVGDGVNDAPALAQADVGIAI  230 (280)
T ss_dssp             -------CEEEEECTTTTHHHHHHSSEEEEC
T ss_pred             -------CEEEEeCCchhHHHHHhCCceEEe
Confidence                   899999999999999999975443

>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}

Probab=99.11  E-value=8.2e-11  Score=102.65  Aligned_cols=83  Identities=14%  Similarity=0.259  Sum_probs=74.9

Q ss_pred             HHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhH
Q 017995           78 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV  157 (362)
Q Consensus        78 ~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~  157 (362)
                      .|+.|+++|++++|+||++...++..+ +.+|+..+|+.         .||+|..+..++++++++|++|++|||+.+|+
T Consensus        60 ~l~~L~~~G~~~~ivT~~~~~~~~~~l-~~lgi~~~~~~---------~k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi  129 (195)
T 3n07_A           60 GVKALMNAGIEIAIITGRRSQIVENRM-KALGISLIYQG---------QDDKVQAYYDICQKLAIAPEQTGYIGDDLIDW  129 (195)
T ss_dssp             HHHHHHHTTCEEEEECSSCCHHHHHHH-HHTTCCEEECS---------CSSHHHHHHHHHHHHCCCGGGEEEEESSGGGH
T ss_pred             HHHHHHHCCCEEEEEECcCHHHHHHHH-HHcCCcEEeeC---------CCCcHHHHHHHHHHhCCCHHHEEEEcCCHHHH
Confidence            499999999999999999999999888 88998655432         39999999999999999999999999999999


Q ss_pred             HHHHHcCCEEEEE
Q 017995          158 VAGKAAGMEVVAV  170 (362)
Q Consensus       158 ~aA~~aG~~~i~v  170 (362)
                      .+++.+|+.++..
T Consensus       130 ~~~~~ag~~va~~  142 (195)
T 3n07_A          130 PVMEKVALRVCVA  142 (195)
T ss_dssp             HHHTTSSEEEECT
T ss_pred             HHHHHCCCEEEEC
Confidence            9999999987653

>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}

Probab=99.10  E-value=1.3e-10  Score=99.59  Aligned_cols=82  Identities=12%  Similarity=0.124  Sum_probs=73.6

Q ss_pred             HHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhH
Q 017995           78 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV  157 (362)
Q Consensus        78 ~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~  157 (362)
                      +|+.|+++|++++|+|+++...++..+ +.+|+.     ++.+     .||+|+.+..++++++++|++|+||||+.+|+
T Consensus        47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~-~~lgi~-----~~~~-----~~~k~~~l~~~~~~~~~~~~~~~~vGD~~nD~  115 (176)
T 3mmz_A           47 GIAALRKSGLTMLILSTEQNPVVAARA-RKLKIP-----VLHG-----IDRKDLALKQWCEEQGIAPERVLYVGNDVNDL  115 (176)
T ss_dssp             HHHHHHHTTCEEEEEESSCCHHHHHHH-HHHTCC-----EEES-----CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred             HHHHHHHCCCeEEEEECcChHHHHHHH-HHcCCe-----eEeC-----CCChHHHHHHHHHHcCCCHHHEEEEcCCHHHH
Confidence            799999999999999999999999888 888885     3333     39999999999999999999999999999999


Q ss_pred             HHHHHcCCEEEEE
Q 017995          158 VAGKAAGMEVVAV  170 (362)
Q Consensus       158 ~aA~~aG~~~i~v  170 (362)
                      .+++.+|+.+++.
T Consensus       116 ~~~~~ag~~v~~~  128 (176)
T 3mmz_A          116 PCFALVGWPVAVA  128 (176)
T ss_dssp             HHHHHSSEEEECT
T ss_pred             HHHHHCCCeEECC
Confidence            9999999886543

>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}

Probab=99.05  E-value=6.6e-10  Score=95.03  Aligned_cols=147  Identities=10%  Similarity=0.072  Sum_probs=92.4

Q ss_pred             CHHHHHHHHHHHHHHcCCCCCHHHHHhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh-hhcCCCCCchHHHHHH
Q 017995            2 TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD-HLCKVKALPGANRLIK   80 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~pgv~~~L~   80 (362)
                      |++.+..++++   .+|.+++.+.+.   |.+..+.+       +.  ..+++.+.+   +.. .....+++||+.++|+
T Consensus        18 s~~~~~~~~~~---~~g~~~~~~~~~---g~~~~~~~-------~~--~~~~~~~~~---~~~~~~~~~~~~pg~~e~L~   79 (180)
T 3bwv_A           18 TLGAVVKAVNE---RADLNIKMESLN---GKKLKHMI-------PE--HEGLVMDIL---KEPGFFRNLDVMPHAQEVVK   79 (180)
T ss_dssp             HHHHHHHHHHH---HSCCCCCGGGCT---TCCC-----------------CHHHHHH---HSTTGGGSCCBCTTHHHHHH
T ss_pred             cHHHHHHHHHH---HhCCCCCHHHHc---CccHHHHC-------Cc--hHHHHHHHH---hCcchhccCCCCcCHHHHHH
Confidence            45667777776   678877765542   54443321       11  111222211   222 2346899999999999


Q ss_pred             HHHHCCCcEEEEcCC---ChHh--HHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHh
Q 017995           81 HLSCHGVPMALASNS---HRAT--IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVI  155 (362)
Q Consensus        81 ~L~~~g~~~~i~S~~---~~~~--i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~  155 (362)
                      .|++. ++++|+||+   ++..  ....|...+++..+|+.|+++++.               ++    ++|++||||..
T Consensus        80 ~L~~~-~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~~i~~~~~~---------------~l----~~~l~ieDs~~  139 (180)
T 3bwv_A           80 QLNEH-YDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFVFCGRKN---------------II----LADYLIDDNPK  139 (180)
T ss_dssp             HHTTT-SEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGGEEECSCGG---------------GB----CCSEEEESCHH
T ss_pred             HHHhc-CCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcccEEEeCCcC---------------ee----cccEEecCCcc
Confidence            99985 999999998   4322  233453446777788899988762               11    77999999999


Q ss_pred             hHHHHHHcCCEEEEEcCCCCccccccchhHhhccccc
Q 017995          156 GVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD  192 (362)
Q Consensus       156 d~~aA~~aG~~~i~v~~~~~~~~~~ssa~~vi~~l~e  192 (362)
                      |+.  ..+| .++++++.....   ..++.+++++.+
T Consensus       140 ~i~--~aaG-~~i~~~~~~~~~---~~~~~~i~~~~e  170 (180)
T 3bwv_A          140 QLE--IFEG-KSIMFTASHNVY---EHRFERVSGWRD  170 (180)
T ss_dssp             HHH--HCSS-EEEEECCGGGTT---CCSSEEECSHHH
T ss_pred             hHH--HhCC-CeEEeCCCcccC---CCCceecCCHHH
Confidence            985  4689 999997643211   233455666555

>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A

Probab=99.05  E-value=8.3e-10  Score=100.34  Aligned_cols=74  Identities=20%  Similarity=0.287  Sum_probs=61.3

Q ss_pred             CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecC-HhhHHHHHHcCCEEEEEcCCCCcccccc----chhHhhccccccc
Q 017995          121 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDS-VIGVVAGKAAGMEVVAVPSLPKQTHRYT----AADEVINSLLDLR  194 (362)
Q Consensus       121 ~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs-~~d~~aA~~aG~~~i~v~~~~~~~~~~s----sa~~vi~~l~el~  194 (362)
                      +....+||+|.+|..+++++|++|++|+||||+ .+|+.+|+++|+.+++|.++........    .++.+++++.++.
T Consensus       176 ~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~pd~~~~~l~~l~  254 (264)
T 3epr_A          176 KPVFIGKPNAIIMNKALEILNIPRNQAVMVGDNYLTDIMAGINNDIDTLLVTTGFTTVEEVPDLPIQPSYVLASLDEWT  254 (264)
T ss_dssp             CCEECSTTSHHHHHHHHHHHTSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCGGGGGGCSSCCSEEESCGGGCC
T ss_pred             CcccCCCCCHHHHHHHHHHhCcCcccEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEEECCHHHHh
Confidence            344568999999999999999999999999999 5999999999999999988654333221    4678888888764

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A

Probab=99.04  E-value=1.3e-11  Score=106.47  Aligned_cols=94  Identities=12%  Similarity=0.099  Sum_probs=86.6

Q ss_pred             CCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEE
Q 017995           69 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL  148 (362)
Q Consensus        69 ~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l  148 (362)
                      +.++||+.++|+.|++. ++++|+|++.+.+++.++ +.+++.++|+.+++.+++...|   +.|...++++|.++++|+
T Consensus        54 v~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl-~~ld~~~~f~~~~~rd~~~~~k---~~~~k~L~~Lg~~~~~~v  128 (181)
T 2ght_A           54 VLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVA-DLLDKWGAFRARLFRESCVFHR---GNYVKDLSRLGRDLRRVL  128 (181)
T ss_dssp             EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHH-HHHCTTCCEEEEECGGGSEEET---TEEECCGGGTCSCGGGEE
T ss_pred             EEeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHH-HHHCCCCcEEEEEeccCceecC---CcEeccHHHhCCCcceEE
Confidence            57899999999999998 999999999999999999 8899999999999999887655   457788899999999999


Q ss_pred             EEecCHhhHHHHHHcCCEE
Q 017995          149 VIEDSVIGVVAGKAAGMEV  167 (362)
Q Consensus       149 ~igDs~~d~~aA~~aG~~~  167 (362)
                      +|||++.++.++.++|+.+
T Consensus       129 ivdDs~~~~~~~~~ngi~i  147 (181)
T 2ght_A          129 ILDNSPASYVFHPDNAVPV  147 (181)
T ss_dssp             EECSCGGGGTTCTTSBCCC
T ss_pred             EEeCCHHHhccCcCCEeEe
Confidence            9999999999999999985

>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}

Probab=99.03  E-value=2.4e-11  Score=109.77  Aligned_cols=120  Identities=18%  Similarity=0.209  Sum_probs=81.7

Q ss_pred             CchHHHHHHHHHHC-CCcEEEEcCCChHhHHHHHHhhcCCcCCCc---EEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 017995           72 LPGANRLIKHLSCH-GVPMALASNSHRATIESKISYQHGWNESFS---VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS  147 (362)
Q Consensus        72 ~pgv~~~L~~L~~~-g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~---~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~  147 (362)
                      ++++.++++.|++. |+++ ++++.........+ ...++..+|+   .+++.+.+..+||+|..|..+++++|++|++|
T Consensus       133 ~~~~~~~l~~l~~~~~~~~-i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~  210 (271)
T 2x4d_A          133 YQNMNNAFQVLMELEKPVL-ISLGKGRYYAATSG-LMLDVGPYMKALEYACGIKAEVVGKPSPEFFKSALQAIGVEAHQA  210 (271)
T ss_dssp             HHHHHHHHHHHHHCSSCCE-EEECCCSEEEETTE-EEECHHHHHHHHHHHHTCCCEEESTTCHHHHHHHHHHHTCCGGGE
T ss_pred             HHHHHHHHHHHHhcCCCeE-EEEcCCcccccCCC-cccChhHHHHHHHHHhCCceeeccCCCHHHHHHHHHHhCCCcceE
Confidence            45677777777776 7776 56655443322111 1222222222   23344556679999999999999999999999


Q ss_pred             EEEecCH-hhHHHHHHcCCEEEEEcCCCC-cccc---ccchhHhhcccccc
Q 017995          148 LVIEDSV-IGVVAGKAAGMEVVAVPSLPK-QTHR---YTAADEVINSLLDL  193 (362)
Q Consensus       148 l~igDs~-~d~~aA~~aG~~~i~v~~~~~-~~~~---~ssa~~vi~~l~el  193 (362)
                      ++|||+. +|+.+|+.+|+.+++|.++.. ....   ...++.++.++.++
T Consensus       211 i~iGD~~~nDi~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~el  261 (271)
T 2x4d_A          211 VMIGDDIVGDVGGAQRCGMRALQVRTGKFRPSDEHHPEVKADGYVDNLAEA  261 (271)
T ss_dssp             EEEESCTTTTHHHHHHTTCEEEEESSTTCCGGGGGCSSCCCSEEESSHHHH
T ss_pred             EEECCCcHHHHHHHHHCCCcEEEEcCCCCCchhhcccCCCCCEEeCCHHHH
Confidence            9999998 999999999999999988632 1111   12356677776654

>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0

Probab=98.95  E-value=2.5e-09  Score=97.12  Aligned_cols=71  Identities=37%  Similarity=0.429  Sum_probs=58.1

Q ss_pred             CCCCCCCHHHHHHHHHHcCCCCCcEEEEecC-HhhHHHHHHcCCEEEEEcCCCCcccccc--------chhHhhcccccc
Q 017995          123 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDS-VIGVVAGKAAGMEVVAVPSLPKQTHRYT--------AADEVINSLLDL  193 (362)
Q Consensus       123 ~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs-~~d~~aA~~aG~~~i~v~~~~~~~~~~s--------sa~~vi~~l~el  193 (362)
                      ...+||+|..|..+++++|++|++|+||||+ .+|+.+|+++|+.+++|.++........        .++.++.++.++
T Consensus       183 ~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~~~~~g~~~~~v~~g~~~~~~~~~~~~~~~~~~d~v~~~~~el  262 (268)
T 3qgm_A          183 VVVGKPSEVIMREALDILGLDAKDVAVVGDQIDVDVAAGKAIGAETVLVLTGVTTRENLDQMIERHGLKPDYVFNSLKDM  262 (268)
T ss_dssp             EECSTTSHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCTTTHHHHHHHHTCCCSEEESSHHHH
T ss_pred             eecCCCCHHHHHHHHHHhCCCchhEEEECCCchHHHHHHHHCCCcEEEECCCCCCHHHHHhhccccCCCCCEEECCHHHH
Confidence            4568999999999999999999999999999 5999999999999999988654332221        356677766654

>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0

Probab=98.94  E-value=4e-09  Score=95.65  Aligned_cols=72  Identities=28%  Similarity=0.398  Sum_probs=57.4

Q ss_pred             CCCCCCCCHHHHHHHHHHcCCCCCcEEEEecC-HhhHHHHHHcCCEEEEEcCCCCcccccc----chhHhhcccccc
Q 017995          122 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDS-VIGVVAGKAAGMEVVAVPSLPKQTHRYT----AADEVINSLLDL  193 (362)
Q Consensus       122 d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs-~~d~~aA~~aG~~~i~v~~~~~~~~~~s----sa~~vi~~l~el  193 (362)
                      ....+||+|..|..+++++|++|++|++|||+ .+|+.+|+.+|+.++++.++....+...    .++.++.++.++
T Consensus       178 ~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~d~v~~~~~el  254 (266)
T 3pdw_A          178 PVFIGKPESIIMEQAMRVLGTDVSETLMVGDNYATDIMAGINAGMDTLLVHTGVTKREHMTDDMEKPTHAIDSLTEW  254 (266)
T ss_dssp             CEECSTTSSHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEECCC------CCTTSCCCSEEESSGGGG
T ss_pred             ccccCCCCHHHHHHHHHHcCCChhhEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEEeCCHHHH
Confidence            34568999999999999999999999999999 6999999999999999998643332221    367888887774

>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}

Probab=98.86  E-value=4.3e-09  Score=89.44  Aligned_cols=79  Identities=16%  Similarity=0.064  Sum_probs=67.5

Q ss_pred             HHHHHHHCCCcEEEEcCCChHhHHHHHHh--hcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHh
Q 017995           78 LIKHLSCHGVPMALASNSHRATIESKISY--QHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVI  155 (362)
Q Consensus        78 ~L~~L~~~g~~~~i~S~~~~~~i~~~L~~--~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~  155 (362)
                      .|+.|+++|++++|+|+.  ..++..+ +  .+++    + ++.+     ++++|+.+..++++++++|++|+||||+.+
T Consensus        44 ~L~~Lk~~Gi~~~I~Tg~--~~~~~~l-~~l~lgi----~-~~~g-----~~~K~~~l~~~~~~~gi~~~~~~~vGD~~n  110 (168)
T 3ewi_A           44 GISLLKKSGIEVRLISER--ACSKQTL-SALKLDC----K-TEVS-----VSDKLATVDEWRKEMGLCWKEVAYLGNEVS  110 (168)
T ss_dssp             HHHHHHHTTCEEEEECSS--CCCHHHH-HTTCCCC----C-EECS-----CSCHHHHHHHHHHHTTCCGGGEEEECCSGG
T ss_pred             HHHHHHHCCCEEEEEeCc--HHHHHHH-HHhCCCc----E-EEEC-----CCChHHHHHHHHHHcCcChHHEEEEeCCHh
Confidence            689999999999999999  5677777 7  5565    3 3322     367889999999999999999999999999


Q ss_pred             hHHHHHHcCCEEEE
Q 017995          156 GVVAGKAAGMEVVA  169 (362)
Q Consensus       156 d~~aA~~aG~~~i~  169 (362)
                      |+.+++.+|+.++.
T Consensus       111 Di~~~~~ag~~~a~  124 (168)
T 3ewi_A          111 DEECLKRVGLSAVP  124 (168)
T ss_dssp             GHHHHHHSSEEEEC
T ss_pred             HHHHHHHCCCEEEe
Confidence            99999999999653

>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A

Probab=98.84  E-value=2.6e-09  Score=97.22  Aligned_cols=100  Identities=15%  Similarity=0.172  Sum_probs=77.7

Q ss_pred             cCCCCCchHHHHHHHHHHCCCcEEEEcCCC---hHhHHHHHHhhcCCc--CCCcEEEeCCCCCCCCCCHHHHHHHHHHcC
Q 017995           67 CKVKALPGANRLIKHLSCHGVPMALASNSH---RATIESKISYQHGWN--ESFSVIVGSDEVRTGKPSPDIFLEAAKRLN  141 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~---~~~i~~~L~~~~gl~--~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~  141 (362)
                      ...+++||+.++|+.|+++|++++|+||.+   ...+...| +.+|+.  .+|+.++++++.  .||.+.  ...+ ..+
T Consensus        98 ~~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L-~~~Gl~~v~~~~vi~~~~~~--~K~~~~--~~~~-~~~  171 (258)
T 2i33_A           98 AEAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNL-ERVGAPQATKEHILLQDPKE--KGKEKR--RELV-SQT  171 (258)
T ss_dssp             CCCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHH-HHHTCSSCSTTTEEEECTTC--CSSHHH--HHHH-HHH
T ss_pred             CCCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHH-HHcCCCcCCCceEEECCCCC--CCcHHH--HHHH-HhC
Confidence            357899999999999999999999999998   45566667 778998  788888887754  466543  3322 223


Q ss_pred             CCCCcEEEEecCHhhHHHH-------HH---------cCCEEEEEcCCC
Q 017995          142 MEPSSSLVIEDSVIGVVAG-------KA---------AGMEVVAVPSLP  174 (362)
Q Consensus       142 ~~p~~~l~igDs~~d~~aA-------~~---------aG~~~i~v~~~~  174 (362)
                        ...|+||||+.+|+.+|       ++         +|++++.++...
T Consensus       172 --~~~~l~VGDs~~Di~aA~~~~~~~r~a~v~~~~~~aG~~~i~lpn~~  218 (258)
T 2i33_A          172 --HDIVLFFGDNLSDFTGFDGKSVKDRNQAVTDSKAQFGEKFIIFPNPM  218 (258)
T ss_dssp             --EEEEEEEESSGGGSTTCSSCCHHHHHHHHHHTGGGBTTTEEECCCCS
T ss_pred             --CCceEEeCCCHHHhcccccCCHHHHHHHHHHHHHHhcCceEECCCCC
Confidence              23499999999999998       24         899999998754

>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}

Probab=98.75  E-value=4e-09  Score=96.97  Aligned_cols=99  Identities=14%  Similarity=0.129  Sum_probs=83.2

Q ss_pred             CCCchHHHHHHHHHHC-CCcEEEEcCC---------------------ChHhHHHHHHhhcCCcCCCcEE----------
Q 017995           70 KALPGANRLIKHLSCH-GVPMALASNS---------------------HRATIESKISYQHGWNESFSVI----------  117 (362)
Q Consensus        70 ~~~pgv~~~L~~L~~~-g~~~~i~S~~---------------------~~~~i~~~L~~~~gl~~~f~~i----------  117 (362)
                      .+.+++.++|+.|+++ |+++++.|+.                     ....+...+ +..|+..+|..+          
T Consensus       122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~g~~~~~~~~~~~~~~~~~~  200 (289)
T 3gyg_A          122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKIC-EEYGVSVNINRCNPLAGDPEDS  200 (289)
T ss_dssp             CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHH-HHHTEEEEEEECCGGGTCCTTE
T ss_pred             CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHH-HHcCCCEEEEEccccccCCCCc
Confidence            5678999999999987 9999999987                     556666667 777876666544          


Q ss_pred             EeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEE
Q 017995          118 VGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA  169 (362)
Q Consensus       118 v~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~  169 (362)
                      .+.+....+++++..+..+++++|++|++|++|||+.+|+.+++.+|+.+++
T Consensus       201 ~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~  252 (289)
T 3gyg_A          201 YDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLL  252 (289)
T ss_dssp             EEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEEC
T ss_pred             eEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEE
Confidence            4555566789999999999999999999999999999999999999976543

>2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A*

Probab=98.52  E-value=2.3e-07  Score=91.41  Aligned_cols=100  Identities=20%  Similarity=0.184  Sum_probs=82.6

Q ss_pred             CCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcC-------------CcCCCcEEEeCCCCCCCCCCHHH---
Q 017995           69 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHG-------------WNESFSVIVGSDEVRTGKPSPDI---  132 (362)
Q Consensus        69 ~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~g-------------l~~~f~~iv~~~d~~~gKp~p~~---  132 (362)
                      +..-|.+..+|..|++.| ++.++||++.++++..+...+|             +.++||.||+..    .||..-.   
T Consensus       245 v~kdp~l~~~L~~Lr~~G-KlfLiTNS~~~yv~~~m~yllg~~~~~~~~~~~~dWrdlFD~vI~~A----~KP~FF~~~~  319 (555)
T 2jc9_A          245 VVKDGKLPLLLSRMKEVG-KVFLATNSDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILVDA----RKPLFFGEGT  319 (555)
T ss_dssp             BCCCTHHHHHHHHHHHHS-EEEEECSSCHHHHHHHHHHHTCSSSSSSTTSCCCCGGGGCSEEEESC----CTTGGGTTCC
T ss_pred             cCCChHHHHHHHHHHHcC-CEEEEeCCChHHHHHHHHHhcCCCccccccccccchhhhCCEEEEeC----CCCCcccCCC
Confidence            556789999999999999 9999999999999988833335             668999977653    3333111   


Q ss_pred             -------------------------------HHHHHHHcCCCCCcEEEEecCH-hhHHHHH-HcCCEEEEEcCC
Q 017995          133 -------------------------------FLEAAKRLNMEPSSSLVIEDSV-IGVVAGK-AAGMEVVAVPSL  173 (362)
Q Consensus       133 -------------------------------~~~~~~~~~~~p~~~l~igDs~-~d~~aA~-~aG~~~i~v~~~  173 (362)
                                                     +..+++.+|+.+++++||||.. +|+..|+ .+|++++.|-+.
T Consensus       320 pfr~Vd~~tg~l~~~~~~~~l~~g~vY~gGn~~~~~~llg~~g~eVLYVGDhIftDIl~~kk~~GWrTiLViPE  393 (555)
T 2jc9_A          320 VLRQVDTKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLVIPE  393 (555)
T ss_dssp             CEEEEETTTTEECSSCCCSCCCTTCCEEECCHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHHCCEEEEECTT
T ss_pred             cceEeecCCCccccccccccccCCceeccCCHHHHHHHhCCCCCeEEEECCEehHhHHhHHhhcCeEEEEEEec
Confidence                                           5788889999999999999999 8999997 899999999774

>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A

Probab=98.31  E-value=1.4e-06  Score=78.67  Aligned_cols=98  Identities=10%  Similarity=0.065  Sum_probs=72.7

Q ss_pred             CCchHHHHHHHHHHCCCcEEEEcCCCh------HhHH-HHHHhhcCC-------------cCCCcEEEeCCC--------
Q 017995           71 ALPGANRLIKHLSCHGVPMALASNSHR------ATIE-SKISYQHGW-------------NESFSVIVGSDE--------  122 (362)
Q Consensus        71 ~~pgv~~~L~~L~~~g~~~~i~S~~~~------~~i~-~~L~~~~gl-------------~~~f~~iv~~~d--------  122 (362)
                      ..+++.++++.+++.|+++.+.|....      ..+. ..+ ..+++             .+.|+.++.+++        
T Consensus        86 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~  164 (261)
T 2rbk_A           86 PQEEVKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFY-DFLHVNVIPTVSFEEASNKEVIQMTPFITEEEEKEVLP  164 (261)
T ss_dssp             CHHHHHHHHHHHHHHTCCEEEECSSCEEEESCCHHHHHHTT-TTTCCCCCCBCCHHHHHTSCCSEEEECCCHHHHHHHGG
T ss_pred             CHHHHHHHHHHHHHcCCeEEEEeCCcEEEeCccHHHHHHHH-HhhcccCCCccccchhccCceeEEEEEeCHHHHHHHHH
Confidence            357899999999998898888875432      2222 222 22332             345555554432        


Q ss_pred             -----------------CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEE
Q 017995          123 -----------------VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA  169 (362)
Q Consensus       123 -----------------~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~  169 (362)
                                       +..++|++..+..+++++|+++++|++|||+.+|+.+++.+|+.+++
T Consensus       165 ~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~  228 (261)
T 2rbk_A          165 SIPTCEIGRWYPAFADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAM  228 (261)
T ss_dssp             GSTTCEEECSSTTCCEEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred             hcCCeEEEEecCCeEEecCCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEe
Confidence                             44678999999999999999999999999999999999999996643

>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10

Probab=98.19  E-value=3.4e-06  Score=74.81  Aligned_cols=95  Identities=15%  Similarity=0.085  Sum_probs=73.5

Q ss_pred             chHHHHHHHHH-HC-CCcE-----------EEEc-CCChHhHHHHHHhhcCCcCCCcEEEeCCC----CCCCCCCHHHHH
Q 017995           73 PGANRLIKHLS-CH-GVPM-----------ALAS-NSHRATIESKISYQHGWNESFSVIVGSDE----VRTGKPSPDIFL  134 (362)
Q Consensus        73 pgv~~~L~~L~-~~-g~~~-----------~i~S-~~~~~~i~~~L~~~~gl~~~f~~iv~~~d----~~~gKp~p~~~~  134 (362)
                      +.+.++++.++ +. |+.+           .+++ +.+.+.++..+ +.++  ..|+.+ ++..    ...++|++..+.
T Consensus        84 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~-~~~~~~ei~~~~~~K~~~~~  159 (231)
T 1wr8_A           84 DEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVETVREII-NELN--LNLVAV-DSGFAIHVKKPWINKGSGIE  159 (231)
T ss_dssp             SHHHHHHHHHHHHCTTCCBCTTGGGCSSCEEECTTTSCHHHHHHHH-HHTT--CSCEEE-ECSSCEEEECTTCCHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCceEEecCCCceeeEEEECCCCCHHHHHHHH-HhcC--CcEEEE-ecCcEEEEecCCCChHHHHH
Confidence            78888888887 65 6654           5666 54677777776 5554  556766 4432    346799999999


Q ss_pred             HHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEEEcC
Q 017995          135 EAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS  172 (362)
Q Consensus       135 ~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~~  172 (362)
                      .+++++|+++++|++|||+.+|+.+++.+|+.+ .+..
T Consensus       160 ~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v-~~~~  196 (231)
T 1wr8_A          160 KASEFLGIKPKEVAHVGDGENDLDAFKVVGYKV-AVAQ  196 (231)
T ss_dssp             HHHHHHTSCGGGEEEEECSGGGHHHHHHSSEEE-ECTT
T ss_pred             HHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeE-EecC
Confidence            999999999999999999999999999999984 4543

>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A

Probab=98.06  E-value=1.3e-05  Score=72.75  Aligned_cols=58  Identities=19%  Similarity=0.140  Sum_probs=46.7

Q ss_pred             CCCcEEEeCCC----CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEE
Q 017995          112 ESFSVIVGSDE----VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA  169 (362)
Q Consensus       112 ~~f~~iv~~~d----~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~  169 (362)
                      ..+..+.++..    ...+.+++..+..+++++|+++++|++|||+.+|+.+++.+|+.+.+
T Consensus       177 ~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam  238 (279)
T 4dw8_A          177 GKINVFRSEPYFLELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAM  238 (279)
T ss_dssp             TTCEEEEEETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred             CCEEEEEcCCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEc
Confidence            34555555532    23566779999999999999999999999999999999999976543

>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*

Probab=98.03  E-value=2.4e-06  Score=80.95  Aligned_cols=71  Identities=14%  Similarity=0.153  Sum_probs=53.8

Q ss_pred             CCCCCCCHHHHHHHHHHc----------------------C-----CCCCcEEEEecCH-hhHHHHHHcCCEEEEEcCCC
Q 017995          123 VRTGKPSPDIFLEAAKRL----------------------N-----MEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLP  174 (362)
Q Consensus       123 ~~~gKp~p~~~~~~~~~~----------------------~-----~~p~~~l~igDs~-~d~~aA~~aG~~~i~v~~~~  174 (362)
                      ..+|||+|.+|..+++.+                      |     .++++|+||||+. +|+.+|+++|+.+++|.++.
T Consensus       242 ~~~GKP~~~~y~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~ti~V~~G~  321 (352)
T 3kc2_A          242 YTLGKPTKLTYDFAHHVLIDWEKRLSGKIGQSVKQKLPLLGTKPSTSPFHAVFMVGDNPASDIIGAQNYGWNSCLVKTGV  321 (352)
T ss_dssp             EECSTTCHHHHHHHHHHHHHHHHHHHC--------------CCTTTTTSSEEEEEESCTTTHHHHHHHHTCEEEECSSSS
T ss_pred             eEecCCCHHHHHHHHHHHHHHHHhhhcccccccccccccccccccCCCcceEEEEecCcHHHHHHHHHcCCEEEEEccCC
Confidence            348999999999987754                      2     2679999999999 69999999999999998854


Q ss_pred             Ccccc---ccchhHhhcccccc
Q 017995          175 KQTHR---YTAADEVINSLLDL  193 (362)
Q Consensus       175 ~~~~~---~ssa~~vi~~l~el  193 (362)
                      .....   ...++.++.++.++
T Consensus       322 ~~~~~~~~~~~pd~vi~~l~el  343 (352)
T 3kc2_A          322 YNEGDDLKECKPTLIVNDVFDA  343 (352)
T ss_dssp             CCTTCCCTTCCCSEECSSHHHH
T ss_pred             CCcccccccCCCCEEECCHHHH
Confidence            32211   22456777777664

>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}

Probab=98.01  E-value=4.1e-06  Score=75.64  Aligned_cols=86  Identities=15%  Similarity=0.238  Sum_probs=64.8

Q ss_pred             cCCCCCchHHHHHHHHHHCCCcEEEEcCCCh----HhHHHHHHhhcCCcCCCc-EEEeCCCCCCCCCCHHHHHHHHHHcC
Q 017995           67 CKVKALPGANRLIKHLSCHGVPMALASNSHR----ATIESKISYQHGWNESFS-VIVGSDEVRTGKPSPDIFLEAAKRLN  141 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~----~~i~~~L~~~~gl~~~f~-~iv~~~d~~~gKp~p~~~~~~~~~~~  141 (362)
                      ...+++||+.++|+.|+++|++++|+|+.++    +.+...| +.+|+..+++ .++...+    +++....+..+.+.|
T Consensus        98 g~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L-~~lGi~~~~~~~Lilr~~----~~~K~~~r~~L~~~g  172 (260)
T 3pct_A           98 RQSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDM-KRLGFTGVNDKTLLLKKD----KSNKSVRFKQVEDMG  172 (260)
T ss_dssp             TCCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHH-HHHTCCCCSTTTEEEESS----CSSSHHHHHHHHTTT
T ss_pred             CCCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHH-HHcCcCccccceeEecCC----CCChHHHHHHHHhcC
Confidence            4689999999999999999999999999865    4777778 7889987764 4444332    233355555555545


Q ss_pred             CCCCcEEEEecCHhhHHH
Q 017995          142 MEPSSSLVIEDSVIGVVA  159 (362)
Q Consensus       142 ~~p~~~l~igDs~~d~~a  159 (362)
                      .  .-+++|||...|+.+
T Consensus       173 y--~iv~~iGD~~~Dl~~  188 (260)
T 3pct_A          173 Y--DIVLFVGDNLNDFGD  188 (260)
T ss_dssp             C--EEEEEEESSGGGGCG
T ss_pred             C--CEEEEECCChHHcCc
Confidence            4  349999999999987

>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A

Probab=97.97  E-value=3.9e-06  Score=76.21  Aligned_cols=83  Identities=14%  Similarity=0.077  Sum_probs=63.0

Q ss_pred             HHCCCcEEEEcCCChHhHHHHHHhhcC--CcCCCcEEEeCC---C-CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhh
Q 017995           83 SCHGVPMALASNSHRATIESKISYQHG--WNESFSVIVGSD---E-VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG  156 (362)
Q Consensus        83 ~~~g~~~~i~S~~~~~~i~~~L~~~~g--l~~~f~~iv~~~---d-~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d  156 (362)
                      ++.++++.++++...  +...+ +.++  +...|+.+.++.   | ...+++++..+..+++++|+++++|++|||+.+|
T Consensus       143 ~~~~~ki~i~~~~~~--~~~~~-~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD  219 (271)
T 1rlm_A          143 DDVLFKFSLNLPDEQ--IPLVI-DKLHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGND  219 (271)
T ss_dssp             CSCEEEEEEECCGGG--HHHHH-HHHHHHTTTSSEEEECSTTEEEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGG
T ss_pred             CCceEEEEEEcCHHH--HHHHH-HHHHHHcCCcEEEEeccCCeEEEEcCCCChHHHHHHHHHHhCCCHHHEEEECCcHHH
Confidence            445677888876543  34444 3333  445677777663   2 3467899999999999999999999999999999


Q ss_pred             HHHHHHcCCEEE
Q 017995          157 VVAGKAAGMEVV  168 (362)
Q Consensus       157 ~~aA~~aG~~~i  168 (362)
                      +.+++.+|+.++
T Consensus       220 ~~m~~~ag~~va  231 (271)
T 1rlm_A          220 AEMLKMARYSFA  231 (271)
T ss_dssp             HHHHHHCSEEEE
T ss_pred             HHHHHHcCCeEE
Confidence            999999999754

>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A

Probab=97.95  E-value=4.5e-06  Score=75.48  Aligned_cols=86  Identities=15%  Similarity=0.183  Sum_probs=63.5

Q ss_pred             cCCCCCchHHHHHHHHHHCCCcEEEEcCCCh----HhHHHHHHhhcCCcCCCc-EEEeCCCCCCCCCCHHHHHHHHHHcC
Q 017995           67 CKVKALPGANRLIKHLSCHGVPMALASNSHR----ATIESKISYQHGWNESFS-VIVGSDEVRTGKPSPDIFLEAAKRLN  141 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~----~~i~~~L~~~~gl~~~f~-~iv~~~d~~~gKp~p~~~~~~~~~~~  141 (362)
                      ...+++||+.++|+.|+++|++++|+|+.++    +.....| +.+|+..+++ .++...+.   ......+.. +.+.|
T Consensus        98 ~~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L-~~lGi~~~~~~~Lilr~~~---~~K~~~r~~-l~~~G  172 (262)
T 3ocu_A           98 RQSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDM-KRLGFNGVEESAFYLKKDK---SAKAARFAE-IEKQG  172 (262)
T ss_dssp             TCCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHH-HHHTCSCCSGGGEEEESSC---SCCHHHHHH-HHHTT
T ss_pred             CCCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHH-HHcCcCcccccceeccCCC---CChHHHHHH-HHhcC
Confidence            4689999999999999999999999998865    4777778 7889977663 45544332   222344444 44445


Q ss_pred             CCCCcEEEEecCHhhHHH
Q 017995          142 MEPSSSLVIEDSVIGVVA  159 (362)
Q Consensus       142 ~~p~~~l~igDs~~d~~a  159 (362)
                      ..  -+++|||...|+.+
T Consensus       173 y~--iv~~vGD~~~Dl~~  188 (262)
T 3ocu_A          173 YE--IVLYVGDNLDDFGN  188 (262)
T ss_dssp             EE--EEEEEESSGGGGCS
T ss_pred             CC--EEEEECCChHHhcc
Confidence            43  49999999999997

>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A

Probab=97.93  E-value=2.3e-05  Score=69.34  Aligned_cols=99  Identities=14%  Similarity=0.041  Sum_probs=76.0

Q ss_pred             CCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCc-----EEEe--CCCC------------------
Q 017995           69 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS-----VIVG--SDEV------------------  123 (362)
Q Consensus        69 ~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~-----~iv~--~~d~------------------  123 (362)
                      -.+-|.+.+.|+.|+++|+++.++|+.+...+...+ +.+++..++-     .|..  +.-.                  
T Consensus        21 ~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~-~~l~~~~~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~~~   99 (227)
T 1l6r_A           21 RLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALK-IFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKR   99 (227)
T ss_dssp             SCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTT
T ss_pred             CcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHH-HHhCCCCeEEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHHHH
Confidence            356678999999999999999999999998888877 6677653110     0110  0000                  


Q ss_pred             -------------------------------------------------CCCCCCHHHHHHHHHHcCCCCCcEEEEecCH
Q 017995          124 -------------------------------------------------RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV  154 (362)
Q Consensus       124 -------------------------------------------------~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~  154 (362)
                                                                       ..+.+++..+..+++++++++++|++|||+.
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~  179 (227)
T 1l6r_A          100 TSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSN  179 (227)
T ss_dssp             SSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSG
T ss_pred             hcCCccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEEECCcH
Confidence                                                             1235567888899999999999999999999


Q ss_pred             hhHHHHHHcCCEEE
Q 017995          155 IGVVAGKAAGMEVV  168 (362)
Q Consensus       155 ~d~~aA~~aG~~~i  168 (362)
                      +|+.+++.+|+.+.
T Consensus       180 nD~~m~~~ag~~va  193 (227)
T 1l6r_A          180 NDMPMFQLPVRKAC  193 (227)
T ss_dssp             GGHHHHTSSSEEEE
T ss_pred             HhHHHHHHcCceEE
Confidence            99999999999743

>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0

Probab=97.80  E-value=4.9e-05  Score=68.42  Aligned_cols=72  Identities=8%  Similarity=0.042  Sum_probs=53.5

Q ss_pred             CChHhHHHHHHhhcCCcCCCcEEEeCC------CCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 017995           95 SHRATIESKISYQHGWNESFSVIVGSD------EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV  168 (362)
Q Consensus        95 ~~~~~i~~~L~~~~gl~~~f~~iv~~~------d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i  168 (362)
                      .+.+.+.... +.++.  .|+.+.++.      -...+++++..+..+++++|+++++|++|||+.+|+.+++.+|+.+.
T Consensus       164 ~~~~~~~~~~-~~l~~--~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~va  240 (274)
T 3fzq_A          164 SNEKVFDEVK-DILQD--KMELAQRDISSQYYEIIQKDFHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIA  240 (274)
T ss_dssp             CCHHHHHHHH-HHHGG--GEEEEEEEGGGTEEEEEETTCSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEE
T ss_pred             cCHHHHHHHH-HHhhc--ceEEEeccCCCceEEEeeCCCCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEE
Confidence            4444444444 44432  245555544      24467888999999999999999999999999999999999997665


Q ss_pred             E
Q 017995          169 A  169 (362)
Q Consensus       169 ~  169 (362)
                      +
T Consensus       241 m  241 (274)
T 3fzq_A          241 M  241 (274)
T ss_dssp             E
T ss_pred             e
Confidence            4

>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0

Probab=97.78  E-value=5.3e-05  Score=68.99  Aligned_cols=95  Identities=15%  Similarity=0.085  Sum_probs=61.2

Q ss_pred             CchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhc-CCcCCCcEEEeCCC----CCCCCCCHHHHHHHHHHcCCCCCc
Q 017995           72 LPGANRLIKHLSCHGVPMALASNSHRATIESKISYQH-GWNESFSVIVGSDE----VRTGKPSPDIFLEAAKRLNMEPSS  146 (362)
Q Consensus        72 ~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~-gl~~~f~~iv~~~d----~~~gKp~p~~~~~~~~~~~~~p~~  146 (362)
                      .+++.+++..+....+++.+ +...+ .+...+ +.+ ...+.+..+.++..    ...+.+++..+..+++++|+++++
T Consensus       144 ~~~~~~~~~~~~~~~~ki~~-~~~~~-~~~~~~-~~l~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~  220 (290)
T 3dnp_A          144 VESLSDLLMDEPVSAPVIEV-YTEHD-IQHDIT-ETITKAFPAVDVIRVNDEKLNIVPKGVSKEAGLALVASELGLSMDD  220 (290)
T ss_dssp             CSCHHHHHHHSCCCCSEEEE-ECCGG-GHHHHH-HHHHHHCTTEEEEEEETTEEEEEETTCCHHHHHHHHHHHTTCCGGG
T ss_pred             cCCHHHHHhcCCCCceEEEE-eCCHH-HHHHHH-HHHHhhCCcEEEEEeCCCeEEEEECCCCHHHHHHHHHHHcCCCHHH
Confidence            34555555555555555533 33322 233333 221 12223444444332    235677889999999999999999


Q ss_pred             EEEEecCHhhHHHHHHcCCEEEE
Q 017995          147 SLVIEDSVIGVVAGKAAGMEVVA  169 (362)
Q Consensus       147 ~l~igDs~~d~~aA~~aG~~~i~  169 (362)
                      |++|||+.+|+.+++.+|+.+++
T Consensus       221 ~i~~GD~~NDi~m~~~ag~~vam  243 (290)
T 3dnp_A          221 VVAIGHQYDDLPMIELAGLGVAM  243 (290)
T ss_dssp             EEEEECSGGGHHHHHHSSEEEEC
T ss_pred             EEEECCchhhHHHHHhcCCEEEe
Confidence            99999999999999999987654

>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}

Probab=97.76  E-value=2.8e-06  Score=74.04  Aligned_cols=95  Identities=13%  Similarity=0.068  Sum_probs=78.1

Q ss_pred             CCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCc-CCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 017995           69 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN-ESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS  147 (362)
Q Consensus        69 ~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~-~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~  147 (362)
                      +...||+.++|+.|. ++|.++|.|++...+++.++ +.++.. .+|++++..+++....   +.|...++.+|.++++|
T Consensus        58 v~~RPgl~eFL~~l~-~~yeivI~Tas~~~ya~~vl-~~LDp~~~~f~~rl~R~~c~~~~---g~y~KdL~~Lgrdl~~v  132 (204)
T 3qle_A           58 TAKRPGADYFLGYLS-QYYEIVLFSSNYMMYSDKIA-EKLDPIHAFVSYNLFKEHCVYKD---GVHIKDLSKLNRDLSKV  132 (204)
T ss_dssp             EEECTTHHHHHHHHT-TTEEEEEECSSCHHHHHHHH-HHTSTTCSSEEEEECGGGSEEET---TEEECCGGGSCSCGGGE
T ss_pred             EEeCCCHHHHHHHHH-hCCEEEEEcCCcHHHHHHHH-HHhCCCCCeEEEEEEecceeEEC---CeeeecHHHhCCChHHE
Confidence            678999999999999 57999999999999999999 888887 4889888877775422   23666788899999999


Q ss_pred             EEEecCHhhHHHHHHcCCEEE
Q 017995          148 LVIEDSVIGVVAGKAAGMEVV  168 (362)
Q Consensus       148 l~igDs~~d~~aA~~aG~~~i  168 (362)
                      ++|+|++..+......|+.+.
T Consensus       133 IiIDDsp~~~~~~p~N~I~I~  153 (204)
T 3qle_A          133 IIIDTDPNSYKLQPENAIPME  153 (204)
T ss_dssp             EEEESCTTTTTTCGGGEEECC
T ss_pred             EEEECCHHHHhhCccCceEee
Confidence            999999987766555555543

>4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A

Probab=97.69  E-value=0.0001  Score=71.82  Aligned_cols=104  Identities=16%  Similarity=0.172  Sum_probs=78.8

Q ss_pred             CCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhc--------CCcCCCcEEEeCCCCC---------------C
Q 017995           69 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQH--------GWNESFSVIVGSDEVR---------------T  125 (362)
Q Consensus        69 ~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~--------gl~~~f~~iv~~~d~~---------------~  125 (362)
                      +..-|.+..+|+.|++.|-++.++||++-++++..+.-.+        ++.++||.||+...-.               -
T Consensus       185 i~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~M~y~~~~~~~~g~dWrdlFDvVIv~A~KP~FF~~~~~~~~v~~~~  264 (470)
T 4g63_A          185 VIREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNPEN  264 (470)
T ss_dssp             EECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHTGGGSCTTCCGGGGCSEEEESCCTTHHHHSCCCEEEECTTT
T ss_pred             hhCCHhHHHHHHHHHHcCCeEEEeeCCCchHHHHHHHhhcccCCCCCCChhhhcCEEEECCCCCCcccCCCcceEEECCC
Confidence            3446899999999999999999999999999988773334        6889999999864210               0


Q ss_pred             C---------CC---CHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHH-HcCCEEEEEcC
Q 017995          126 G---------KP---SPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGK-AAGMEVVAVPS  172 (362)
Q Consensus       126 g---------Kp---~p~~~~~~~~~~~~~p~~~l~igDs~-~d~~aA~-~aG~~~i~v~~  172 (362)
                      +         +|   .-+......+.+|....++++|||+. .|+..++ ..|++++.|-+
T Consensus       265 g~l~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~  325 (470)
T 4g63_A          265 GTMTNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVE  325 (470)
T ss_dssp             CCEEECCSSCCSEEEEECCHHHHHHHTTCCGGGEEEEESCCCSCHHHHHHSCCCEEEEECT
T ss_pred             CcccccccccCCceeecCcHHHHHHHhCCCCCeEEEECCchHHHHHhhhhccCCeEEEEhH
Confidence            0         11   01224455567889999999999999 8987776 46999998866

>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0

Probab=97.61  E-value=3.2e-05  Score=70.09  Aligned_cols=44  Identities=16%  Similarity=0.183  Sum_probs=37.1

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEE
Q 017995          126 GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA  169 (362)
Q Consensus       126 gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~  169 (362)
                      +..++..+..+++++|+++++|++|||+.+|+.+++.+|+.+.+
T Consensus       195 ~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam  238 (279)
T 3mpo_A          195 RASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAM  238 (279)
T ss_dssp             SCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC
T ss_pred             CCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeec
Confidence            34478999999999999999999999999999999999976543

>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A

Probab=97.54  E-value=8.9e-05  Score=68.18  Aligned_cols=95  Identities=18%  Similarity=0.121  Sum_probs=67.3

Q ss_pred             CCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCC-----C-----------CCCCCCCHH
Q 017995           68 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD-----E-----------VRTGKPSPD  131 (362)
Q Consensus        68 ~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~-----d-----------~~~gKp~p~  131 (362)
                      ..++.||+.++++.|+++|+++.++|+....+++..+ +.+|+......|++..     +           ..+.|+.|.
T Consensus       139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~-~~~g~~~~~~~i~~n~l~~~~~~~~~~~~~~~i~~~~k~~~~  217 (297)
T 4fe3_A          139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVI-RQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGA  217 (297)
T ss_dssp             CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHH-HHTTCCCTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHH
T ss_pred             CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHH-HHcCCCcccceEEeeeEEEcccceeEeccccccchhhcccHH
Confidence            4789999999999999999999999999999999888 7888754433343321     0           112233222


Q ss_pred             HHHHHHHHcCCCCCcEEEEecCHhhHHHHHHc
Q 017995          132 IFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA  163 (362)
Q Consensus       132 ~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~a  163 (362)
                      .=......+.-...+++|+||+.+|+.+++.+
T Consensus       218 ~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l  249 (297)
T 4fe3_A          218 LKNTDYFSQLKDNSNIILLGDSQGDLRMADGV  249 (297)
T ss_dssp             HTCHHHHHHTTTCCEEEEEESSGGGGGTTTTC
T ss_pred             HHHHHHHHhhccCCEEEEEeCcHHHHHHHhCc
Confidence            21222234445667899999999999987744

>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=97.47  E-value=0.00014  Score=74.25  Aligned_cols=88  Identities=13%  Similarity=0.169  Sum_probs=68.0

Q ss_pred             CCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEE
Q 017995           69 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL  148 (362)
Q Consensus        69 ~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l  148 (362)
                      -++.|++.+.++.|+++|+++.++|+.+...++... +.+|+.    .+++.-     .|  +.-..++++++.. ++++
T Consensus       456 D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia-~~lgi~----~~~~~~-----~P--~~K~~~v~~l~~~-~~v~  522 (645)
T 3j08_A          456 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAIS-RELNLD----LVIAEV-----LP--HQKSEEVKKLQAK-EVVA  522 (645)
T ss_dssp             CCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHHTCS----EEECSC-----CT--TCHHHHHHHHTTT-CCEE
T ss_pred             CCchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-HHcCCC----EEEEeC-----CH--HhHHHHHHHHhhC-CeEE
Confidence            457899999999999999999999999999988877 888884    333221     11  2223344455544 8999


Q ss_pred             EEecCHhhHHHHHHcCCEEEE
Q 017995          149 VIEDSVIGVVAGKAAGMEVVA  169 (362)
Q Consensus       149 ~igDs~~d~~aA~~aG~~~i~  169 (362)
                      ||||+.+|+.+.+.+|+.+..
T Consensus       523 ~vGDg~ND~~al~~A~vgiam  543 (645)
T 3j08_A          523 FVGDGINDAPALAQADLGIAV  543 (645)
T ss_dssp             EEECSSSCHHHHHHSSEEEEE
T ss_pred             EEeCCHhHHHHHHhCCEEEEe
Confidence            999999999999999976543

>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A

Probab=97.46  E-value=0.00059  Score=60.94  Aligned_cols=99  Identities=9%  Similarity=0.111  Sum_probs=66.5

Q ss_pred             CCCchHHHHHHHHHHCCCcEEEEcCCCh-------HhHHHHHHhhcC-----C-------cCCCcEEEeCCCC-------
Q 017995           70 KALPGANRLIKHLSCHGVPMALASNSHR-------ATIESKISYQHG-----W-------NESFSVIVGSDEV-------  123 (362)
Q Consensus        70 ~~~pgv~~~L~~L~~~g~~~~i~S~~~~-------~~i~~~L~~~~g-----l-------~~~f~~iv~~~d~-------  123 (362)
                      -..+++.++++.+++.|+.+.+.|+...       ......+ ...+     +       .+.++.++.+++.       
T Consensus        82 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~  160 (258)
T 2pq0_A           82 LRREKVRALTEEAHKNGHPLVFMDAEKMRASIGDHPHIHVSM-ASLKFAHPPVDPLYYENKDIYQALLFCRAEEEEPYVR  160 (258)
T ss_dssp             CCHHHHHHHHHHHHHTTCCEEEECSSCEEESSSSCHHHHHHH-HHTTCCCCCBCTTGGGGSCCCEEEECSCHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHhCCCeEEEEeCCcEEEecCCcHHHHHHH-HhhcCCccccccchhhccCceEEEEECCHHHHHHHHH
Confidence            3456889999999999998888865440       1112222 2111     1       2234444443310       


Q ss_pred             ------------------CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEE
Q 017995          124 ------------------RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA  169 (362)
Q Consensus       124 ------------------~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~  169 (362)
                                        ..+-.....+..+++++|+++++|++|||+.+|+.+++.+|+.+++
T Consensus       161 ~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam  224 (258)
T 2pq0_A          161 NYPEFRFVRWHDVSTDVLPAGGSKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAM  224 (258)
T ss_dssp             HCTTEEEEEEETTEEEEEESSCCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEE
T ss_pred             hCCCeEEEEeCCceEEEEECCCChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEe
Confidence                              1122235668999999999999999999999999999999998764

>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}

Probab=97.39  E-value=0.00016  Score=69.22  Aligned_cols=93  Identities=15%  Similarity=0.081  Sum_probs=64.1

Q ss_pred             CCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCC--CcEEEeCC-----C------------CCCCCCC
Q 017995           69 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNES--FSVIVGSD-----E------------VRTGKPS  129 (362)
Q Consensus        69 ~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~--f~~iv~~~-----d------------~~~gKp~  129 (362)
                      ++++||+.++++.|+++|+++.|+|++...+++.+. +.+|+.--  -+.|++..     +            +..+...
T Consensus       220 ir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia-~~lg~~y~ip~~~Vig~~l~~~~dG~~tg~~~~~~p~~~~~gK  298 (385)
T 4gxt_A          220 IRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFA-TDTNNNYKMKEEKVLGLRLMKDDEGKILPKFDKDFPISIREGK  298 (385)
T ss_dssp             CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HCTTSSCCCCGGGEEEECEEECTTCCEEEEECTTSCCCSTHHH
T ss_pred             ceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHH-HHhCcccCCCcceEEEeEEEEecCCceeeeecCccceeCCCch
Confidence            347999999999999999999999999999999877 77765321  13343321     1            1122223


Q ss_pred             HHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHc
Q 017995          130 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA  163 (362)
Q Consensus       130 p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~a  163 (362)
                      +..+...++. ......++++|||.+|+.+-+..
T Consensus       299 ~~~i~~~~~~-~~~~~~i~a~GDs~~D~~ML~~~  331 (385)
T 4gxt_A          299 VQTINKLIKN-DRNYGPIMVGGDSDGDFAMLKEF  331 (385)
T ss_dssp             HHHHHHHTCC-TTEECCSEEEECSGGGHHHHHHC
T ss_pred             HHHHHHHHHh-cCCCCcEEEEECCHhHHHHHhcC
Confidence            4444443322 24456799999999999998863

>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}

Probab=97.33  E-value=0.00031  Score=63.89  Aligned_cols=83  Identities=10%  Similarity=0.074  Sum_probs=57.6

Q ss_pred             HCCCcEEEEc-CCC-hHhHHHHHHhhcCCcCCCcEEEeCCC----CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhH
Q 017995           84 CHGVPMALAS-NSH-RATIESKISYQHGWNESFSVIVGSDE----VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV  157 (362)
Q Consensus        84 ~~g~~~~i~S-~~~-~~~i~~~L~~~~gl~~~f~~iv~~~d----~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~  157 (362)
                      +..+++.+.. ... +...+.+. +.++  +.+..+.++..    ...+.+++..+..+++++|+++++|++|||+.+|+
T Consensus       164 ~~~~ki~i~~~~~~~~~~~~~l~-~~~~--~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi  240 (283)
T 3dao_A          164 NDIIKFTVFHPDKCEELCTPVFI-PAWN--KKAHLAAAGKEWVDCNAKGVSKWTALSYLIDRFDLLPDEVCCFGDNLNDI  240 (283)
T ss_dssp             SCCCEEEEECSSCHHHHHTTTHH-HHHT--TTEEEEEETTTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGH
T ss_pred             cCceEEEEEcChHHHHHHHHHHH-HHhc--CCEEEEEecCceEEEeeCCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHH
Confidence            5667888873 222 22222222 3333  33455555543    22456678999999999999999999999999999


Q ss_pred             HHHHHcCCEEEE
Q 017995          158 VAGKAAGMEVVA  169 (362)
Q Consensus       158 ~aA~~aG~~~i~  169 (362)
                      .+++.+|+.+.+
T Consensus       241 ~ml~~ag~~vam  252 (283)
T 3dao_A          241 EMLQNAGISYAV  252 (283)
T ss_dssp             HHHHHSSEEEEE
T ss_pred             HHHHhCCCEEEc
Confidence            999999977654

>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...

Probab=97.29  E-value=0.00025  Score=76.13  Aligned_cols=100  Identities=12%  Similarity=0.010  Sum_probs=72.8

Q ss_pred             CCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCC----cEEEeCCCCCCC----------------CC
Q 017995           69 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF----SVIVGSDEVRTG----------------KP  128 (362)
Q Consensus        69 ~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f----~~iv~~~d~~~g----------------Kp  128 (362)
                      -++.|++.++++.|++.|+++.++|+.....+..+. +.+|+....    +.++.++++..-                .-
T Consensus       602 D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia-~~lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~  680 (995)
T 3ar4_A          602 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAIC-RRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARV  680 (995)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-HHHTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEESC
T ss_pred             CCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHH-HHcCcCCCCCcccceEEEchhhhhCCHHHHHHHHhhCcEEEEe
Confidence            457899999999999999999999999999888777 788886532    234444332211                11


Q ss_pred             CHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEE
Q 017995          129 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA  169 (362)
Q Consensus       129 ~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~  169 (362)
                      .|+.-..+.+.++-..+.++|+||+.+|+.+.++|++.+..
T Consensus       681 ~P~~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Advgiam  721 (995)
T 3ar4_A          681 EPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAM  721 (995)
T ss_dssp             CSSHHHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTEEEEE
T ss_pred             CHHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHCCeEEEe
Confidence            23333344444444467899999999999999999998765

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=97.12  E-value=0.0015  Score=67.66  Aligned_cols=87  Identities=13%  Similarity=0.171  Sum_probs=67.0

Q ss_pred             CCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEE
Q 017995           69 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL  148 (362)
Q Consensus        69 ~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l  148 (362)
                      -++.|++.+.++.|+++|+++.++|+.+...+.... +.+|+.    .+++.-     .|  +.-..+++.++-. ++++
T Consensus       534 D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia-~~lgi~----~~~~~~-----~P--~~K~~~v~~l~~~-~~v~  600 (723)
T 3j09_A          534 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAIS-RELNLD----LVIAEV-----LP--HQKSEEVKKLQAK-EVVA  600 (723)
T ss_dssp             CCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHHTCS----EEECSC-----CT--TCHHHHHHHHTTT-CCEE
T ss_pred             CCcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHH-HHcCCc----EEEccC-----CH--HHHHHHHHHHhcC-CeEE
Confidence            468899999999999999999999999999988877 888884    333321     11  1223344445444 8999


Q ss_pred             EEecCHhhHHHHHHcCCEEE
Q 017995          149 VIEDSVIGVVAGKAAGMEVV  168 (362)
Q Consensus       149 ~igDs~~d~~aA~~aG~~~i  168 (362)
                      ||||+.+|+.+.+.+|+.+.
T Consensus       601 ~vGDg~ND~~al~~A~vgia  620 (723)
T 3j09_A          601 FVGDGINDAPALAQADLGIA  620 (723)
T ss_dssp             EEECSSTTHHHHHHSSEEEE
T ss_pred             EEECChhhHHHHhhCCEEEE
Confidence            99999999999999996654

>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}

Probab=97.11  E-value=0.00073  Score=62.08  Aligned_cols=57  Identities=12%  Similarity=-0.010  Sum_probs=45.6

Q ss_pred             CCcEEEeCCCC----CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEE
Q 017995          113 SFSVIVGSDEV----RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA  169 (362)
Q Consensus       113 ~f~~iv~~~d~----~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~  169 (362)
                      .+..+.++..+    ..+.+++..+..+++++|+++++|++|||+.+|+.+++.+|+.+.+
T Consensus       209 ~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam  269 (304)
T 3l7y_A          209 RLVGTASGFGYIDIITKGLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAM  269 (304)
T ss_dssp             TEEEEECSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEEC
T ss_pred             eEEEEEcCCceEEEEcCCCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEc
Confidence            45666555422    2445677899999999999999999999999999999999976544

>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}

Probab=97.10  E-value=0.00041  Score=63.07  Aligned_cols=45  Identities=18%  Similarity=0.142  Sum_probs=40.1

Q ss_pred             CCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEE
Q 017995          125 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA  169 (362)
Q Consensus       125 ~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~  169 (362)
                      .+.+++..+..+++.+|+++++|++|||+.+|+.+++.+|+.+.+
T Consensus       206 ~~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm  250 (285)
T 3pgv_A          206 GGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIM  250 (285)
T ss_dssp             TTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred             CCCChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEc
Confidence            455678999999999999999999999999999999999976543

>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}

Probab=97.08  E-value=0.00067  Score=70.23  Aligned_cols=89  Identities=15%  Similarity=0.109  Sum_probs=71.6

Q ss_pred             CCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEE
Q 017995           69 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL  148 (362)
Q Consensus        69 ~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l  148 (362)
                      -++.|++.+.++.|+++|+++.++|+.+...+..+. +.+|+.+    +++       .-.|+.-....+.++-....++
T Consensus       553 D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia-~~lgi~~----v~a-------~~~P~~K~~~v~~l~~~g~~V~  620 (736)
T 3rfu_A          553 DPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVA-GTLGIKK----VVA-------EIMPEDKSRIVSELKDKGLIVA  620 (736)
T ss_dssp             CCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHH-HHHTCCC----EEC-------SCCHHHHHHHHHHHHHHSCCEE
T ss_pred             ccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCCCE----EEE-------ecCHHHHHHHHHHHHhcCCEEE
Confidence            457899999999999999999999999999988877 8888843    322       2245555556666665678899


Q ss_pred             EEecCHhhHHHHHHcCCEEEE
Q 017995          149 VIEDSVIGVVAGKAAGMEVVA  169 (362)
Q Consensus       149 ~igDs~~d~~aA~~aG~~~i~  169 (362)
                      ||||+.+|+.+-+.+++.+..
T Consensus       621 ~vGDG~ND~paL~~AdvGIAm  641 (736)
T 3rfu_A          621 MAGDGVNDAPALAKADIGIAM  641 (736)
T ss_dssp             EEECSSTTHHHHHHSSEEEEE
T ss_pred             EEECChHhHHHHHhCCEEEEe
Confidence            999999999999999977644

>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*

Probab=96.93  E-value=0.00062  Score=60.99  Aligned_cols=44  Identities=9%  Similarity=-0.065  Sum_probs=40.2

Q ss_pred             CCCHHHHHHHHHHcCCCC--CcEEEEecCHhhHHHHHHcCCEEEEE
Q 017995          127 KPSPDIFLEAAKRLNMEP--SSSLVIEDSVIGVVAGKAAGMEVVAV  170 (362)
Q Consensus       127 Kp~p~~~~~~~~~~~~~p--~~~l~igDs~~d~~aA~~aG~~~i~v  170 (362)
                      ++++..+..+++++|+++  ++|++|||+.+|+.+++.+|+.+++-
T Consensus       175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~  220 (259)
T 3zx4_A          175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVG  220 (259)
T ss_dssp             CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECS
T ss_pred             CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeC
Confidence            677899999999999999  99999999999999999999886543

>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}

Probab=96.83  E-value=0.00063  Score=64.59  Aligned_cols=93  Identities=15%  Similarity=0.154  Sum_probs=71.1

Q ss_pred             CCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcC-CCc-EEEeCCCCCCCCCCHHHHHHHHHHc-CCCC
Q 017995           68 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE-SFS-VIVGSDEVRTGKPSPDIFLEAAKRL-NMEP  144 (362)
Q Consensus        68 ~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~-~f~-~iv~~~d~~~gKp~p~~~~~~~~~~-~~~p  144 (362)
                      .+.+.||+.++|+.+. ++|.++|.|++...+++.++ +.++... +|. .+++.++++.      .+...+.++ |.++
T Consensus        73 ~v~~RPg~~eFL~~l~-~~yeivI~Tas~~~yA~~vl-~~LDp~~~~f~~ri~sr~~~g~------~~~KdL~~L~~~dl  144 (372)
T 3ef0_A           73 YIKFRPGLAQFLQKIS-ELYELHIYTMGTKAYAKEVA-KIIDPTGKLFQDRVLSRDDSGS------LAQKSLRRLFPCDT  144 (372)
T ss_dssp             EEEECTTHHHHHHHHH-TTEEEEEECSSCHHHHHHHH-HHHCTTSCSSSSCEECTTTSSC------SSCCCGGGTCSSCC
T ss_pred             EEEECcCHHHHHHHHh-cCcEEEEEeCCcHHHHHHHH-HHhccCCceeeeEEEEecCCCC------cceecHHHhcCCCC
Confidence            4778999999999999 67999999999999999998 8888887 787 5776666542      223335555 8999


Q ss_pred             CcEEEEecCHhhHHHHHHcCCEEEEEcC
Q 017995          145 SSSLVIEDSVIGVVAGKAAGMEVVAVPS  172 (362)
Q Consensus       145 ~~~l~igDs~~d~~aA~~aG~~~i~v~~  172 (362)
                      ++|++|+|++.-...-   . ..|.|.+
T Consensus       145 ~~viiiDd~~~~~~~~---p-N~I~i~~  168 (372)
T 3ef0_A          145 SMVVVIDDRGDVWDWN---P-NLIKVVP  168 (372)
T ss_dssp             TTEEEEESCSGGGTTC---T-TEEECCC
T ss_pred             ceEEEEeCCHHHcCCC---C-cEeeeCC
Confidence            9999999998533321   2 4556654

>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24

Probab=96.80  E-value=0.00034  Score=65.33  Aligned_cols=96  Identities=17%  Similarity=0.151  Sum_probs=65.0

Q ss_pred             CCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCC-CC-------------------CCCCC
Q 017995           69 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD-EV-------------------RTGKP  128 (362)
Q Consensus        69 ~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~-d~-------------------~~gKp  128 (362)
                      ..+.|++.++|+.|++ |+++.++|+....++.... +.+++.   +.+.+.. ++                   ...++
T Consensus       102 ~~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~  176 (332)
T 1y8a_A          102 AKFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTA-SMIGVR---GELHGTEVDFDSIAVPEGLREELLSIIDVIASLS  176 (332)
T ss_dssp             CCBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHH-HHTTCC---SEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCC
T ss_pred             CCCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccc-hhhhhh---hhhcccccchhhhccccccceeEEecCHHHHhhh
Confidence            4678999999999999 9999999998877776655 555653   3332210 00                   00111


Q ss_pred             C---------------HHHHH----------HHHHHcCCCCCc----EEEEecCHhhHHHHHHc----CCEEEE
Q 017995          129 S---------------PDIFL----------EAAKRLNMEPSS----SLVIEDSVIGVVAGKAA----GMEVVA  169 (362)
Q Consensus       129 ~---------------p~~~~----------~~~~~~~~~p~~----~l~igDs~~d~~aA~~a----G~~~i~  169 (362)
                      .               |..+.          .+....++++++    |++|||+.+|+.+++.+    |+.+++
T Consensus       177 ~~~~l~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam  250 (332)
T 1y8a_A          177 GEELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF  250 (332)
T ss_dssp             HHHHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE
T ss_pred             hHHHHHHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe
Confidence            1               12232          111112677888    99999999999999999    998765

>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A

Probab=96.69  E-value=0.0031  Score=67.77  Aligned_cols=100  Identities=15%  Similarity=0.110  Sum_probs=71.1

Q ss_pred             CCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCC------------------------CcEEEeCCCC-
Q 017995           69 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNES------------------------FSVIVGSDEV-  123 (362)
Q Consensus        69 ~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~------------------------f~~iv~~~d~-  123 (362)
                      -++.|++.+.++.|++.|+++.++|+.....+..+. +.+|+...                        +..++.+.++ 
T Consensus       598 Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia-~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~  676 (1028)
T 2zxe_A          598 DPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIA-KGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLK  676 (1028)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHT
T ss_pred             CCCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHH-HHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhh
Confidence            347899999999999999999999999999887776 77787521                        1123333221 


Q ss_pred             -----------------CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEE
Q 017995          124 -----------------RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA  169 (362)
Q Consensus       124 -----------------~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~  169 (362)
                                       -+.+..|+--..+.+.++-....+.|+||+.+|+.+-+.|++.+..
T Consensus       677 ~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAm  739 (1028)
T 2zxe_A          677 DLSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAM  739 (1028)
T ss_dssp             TCCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEE
T ss_pred             hCCHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEEe
Confidence                             2334445544444333333346799999999999999999998864

>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=96.50  E-value=0.0021  Score=57.42  Aligned_cols=45  Identities=20%  Similarity=0.127  Sum_probs=40.3

Q ss_pred             CCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEE
Q 017995          125 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA  169 (362)
Q Consensus       125 ~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~  169 (362)
                      .+.+++..+..+++++|+++++|++|||+.+|+.+++.+|+.+.+
T Consensus       191 ~~~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam  235 (268)
T 3r4c_A          191 AGTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAM  235 (268)
T ss_dssp             TTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred             CCCCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEe
Confidence            455677999999999999999999999999999999999987544

>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10

Probab=96.01  E-value=0.0041  Score=55.89  Aligned_cols=44  Identities=16%  Similarity=0.157  Sum_probs=39.4

Q ss_pred             CCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 017995          125 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV  168 (362)
Q Consensus       125 ~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i  168 (362)
                      .+.+++..+..+++++|+++++|++|||+.+|+.+++.+|+.+.
T Consensus       187 ~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~  230 (268)
T 1nf2_A          187 KNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVA  230 (268)
T ss_dssp             TTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEE
T ss_pred             CCCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEE
Confidence            35567789999999999999999999999999999999999653

>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A

Probab=95.71  E-value=0.03  Score=60.19  Aligned_cols=100  Identities=14%  Similarity=0.083  Sum_probs=68.9

Q ss_pred             CCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCC------------------------CcEEEeCCCC-
Q 017995           69 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNES------------------------FSVIVGSDEV-  123 (362)
Q Consensus        69 ~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~------------------------f~~iv~~~d~-  123 (362)
                      -++.|++.+.++.|+++|+++.++|+.+...+..+. +.+|+...                        ...++.+.+. 
T Consensus       603 Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia-~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~  681 (1034)
T 3ixz_A          603 DPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIA-ASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLK  681 (1034)
T ss_pred             CCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHH-HHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecHhhh
Confidence            457899999999999999999999999998887776 77787421                        0112222211 


Q ss_pred             -----------------CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEE
Q 017995          124 -----------------RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA  169 (362)
Q Consensus       124 -----------------~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~  169 (362)
                                       -+..-.|+--..+.+.++-....++|+||+.+|+.+-+.||+.+..
T Consensus       682 ~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAM  744 (1034)
T 3ixz_A          682 DMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAM  744 (1034)
T ss_pred             hCCHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEEe
Confidence                             1222234433333333333346699999999999999999988754

>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10

Probab=95.68  E-value=0.0091  Score=54.16  Aligned_cols=44  Identities=25%  Similarity=0.237  Sum_probs=38.1

Q ss_pred             CCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEEEcC
Q 017995          128 PSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS  172 (362)
Q Consensus       128 p~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~~  172 (362)
                      .....+..+++.+|+++++|++|||+.+|+.+++.+|+. +.+..
T Consensus       216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~-va~~~  259 (288)
T 1nrw_A          216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKG-VAMGN  259 (288)
T ss_dssp             SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEE-EECTT
T ss_pred             ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcE-EEEcC
Confidence            345678999999999999999999999999999999994 45543

>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1

Probab=95.36  E-value=0.028  Score=59.44  Aligned_cols=99  Identities=10%  Similarity=0.057  Sum_probs=67.3

Q ss_pred             CCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCC-c---EEEeCCC--------------CCCCCCCHH
Q 017995           70 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF-S---VIVGSDE--------------VRTGKPSPD  131 (362)
Q Consensus        70 ~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f-~---~iv~~~d--------------~~~gKp~p~  131 (362)
                      ++.|++.+.++.|++.|+++.++|+.....+..+- +.+|+.... +   .++++++              .-+..-.|+
T Consensus       535 p~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA-~~lGI~~~~~~~~~~~~~g~~~~~~~el~~~~~~~~V~arv~P~  613 (920)
T 1mhs_A          535 PPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETS-RQLGLGTNIYNAERLGLGGGGDMPGSEVYDFVEAADGFAEVFPQ  613 (920)
T ss_dssp             CCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHH-HHHTSSCSCCCSSSSSSCBCCCGGGGGGGTTTTTTSCEESCCST
T ss_pred             cccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHH-HHcCCCccccCccceeecCcccCCHHHHHHHHhhCeEEEEeCHH
Confidence            57899999999999999999999999999887766 788885311 0   0111100              012222232


Q ss_pred             HHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEE
Q 017995          132 IFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA  169 (362)
Q Consensus       132 ~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~  169 (362)
                      -=....+.++-....+.|+||+.+|..+-++|++.+..
T Consensus       614 ~K~~iV~~Lq~~g~~Vam~GDGvNDapaLk~AdvGIAm  651 (920)
T 1mhs_A          614 HKYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAV  651 (920)
T ss_dssp             HHHHHHHHHHTTTCCCEECCCCGGGHHHHHHSSEEEEE
T ss_pred             HHHHHHHHHHhCCCeEEEEcCCcccHHHHHhCCcCccc
Confidence            22223333332347899999999999999999988765

>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10

Probab=95.36  E-value=0.013  Score=53.03  Aligned_cols=45  Identities=22%  Similarity=0.182  Sum_probs=39.2

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEEEc
Q 017995          126 GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVP  171 (362)
Q Consensus       126 gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~  171 (362)
                      +-+++..+..+++++|+++++|++|||+.+|+.+++.+|+.+ .+.
T Consensus       196 ~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~v-a~~  240 (282)
T 1rkq_A          196 RVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGV-AVD  240 (282)
T ss_dssp             TCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEE-ECT
T ss_pred             CCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEE-Eec
Confidence            445678899999999999999999999999999999999854 443

>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}

Probab=95.31  E-value=0.01  Score=62.67  Aligned_cols=99  Identities=15%  Similarity=0.084  Sum_probs=67.5

Q ss_pred             CCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCC-C-cEEEeCCCC-----------------CCCCCCH
Q 017995           70 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNES-F-SVIVGSDEV-----------------RTGKPSP  130 (362)
Q Consensus        70 ~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~-f-~~iv~~~d~-----------------~~gKp~p  130 (362)
                      ++.|++.+.++.|++.|+++.++|+.....+..+- +.+|+... + ..++.+.+.                 -+..-.|
T Consensus       488 p~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA-~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~arv~P  566 (885)
T 3b8c_A          488 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG-RRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFAGVFP  566 (885)
T ss_dssp             CCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHH-HTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEECCCH
T ss_pred             ccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHH-HHhCCccccCCcceeeccccccccchhHHHHHHhhCcEEEEECH
Confidence            57899999999999999999999999998877666 78888431 1 111112111                 1223344


Q ss_pred             HHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEE
Q 017995          131 DIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA  169 (362)
Q Consensus       131 ~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~  169 (362)
                      +-=....+.+.-....+.|+||+.+|..+-+++++.+..
T Consensus       567 ~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdvGIAm  605 (885)
T 3b8c_A          567 EHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAV  605 (885)
T ss_dssp             HHHHHHHHHHHHTTCCCCBCCCSSTTHHHHHHSSSCCCC
T ss_pred             HHHHHHHHHHHHCCCeEEEEcCCchhHHHHHhCCEeEEe
Confidence            433333333322347899999999999999999887654

>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster}

Probab=95.24  E-value=0.0026  Score=59.13  Aligned_cols=96  Identities=11%  Similarity=0.131  Sum_probs=67.3

Q ss_pred             CCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCC--CcEEEeCCCCC-C---CCCCHHHHHHHHHHc---
Q 017995           70 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNES--FSVIVGSDEVR-T---GKPSPDIFLEAAKRL---  140 (362)
Q Consensus        70 ~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~--f~~iv~~~d~~-~---gKp~p~~~~~~~~~~---  140 (362)
                      ...||+.++|+.+.+ .|.++|.|++...+++.++ +.++....  |...+..+.+. +   .+.....+..-+..+   
T Consensus       164 ~~RP~l~eFL~~l~~-~yeivIfTas~~~ya~~vl-d~Ld~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~vKdLs~Lw~~  241 (320)
T 3shq_A          164 LMRPYLHEFLTSAYE-DYDIVIWSATSMRWIEEKM-RLLGVASNDNYKVMFYLDSTAMISVHVPERGVVDVKPLGVIWAL  241 (320)
T ss_dssp             HBCTTHHHHHHHHHH-HEEEEEECSSCHHHHHHHH-HHTTCTTCSSCCCCEEECGGGCEEEEETTTEEEEECCHHHHHHH
T ss_pred             EeCCCHHHHHHHHHh-CCEEEEEcCCcHHHHHHHH-HHhCCCCCcceeEEEEEcCCccccccccCCCCEEEEEhHHhhcc
Confidence            368999999999996 4999999999999999999 88877654  33222222211 1   111122344456666   


Q ss_pred             --CCCCCcEEEEecCHhhHHHHHHcCCEE
Q 017995          141 --NMEPSSSLVIEDSVIGVVAGKAAGMEV  167 (362)
Q Consensus       141 --~~~p~~~l~igDs~~d~~aA~~aG~~~  167 (362)
                        |.+++++++|.|++.-.......|+.+
T Consensus       242 ~p~rdl~~tIiIDdsp~~~~~~p~NgI~I  270 (320)
T 3shq_A          242 YKQYNSSNTIMFDDIRRNFLMNPKSGLKI  270 (320)
T ss_dssp             CTTCCGGGEEEEESCGGGGTTSGGGEEEC
T ss_pred             cCCCChhHEEEEeCChHHhccCcCceEEe
Confidence              889999999999997777666665543

>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*

Probab=95.07  E-value=0.015  Score=51.47  Aligned_cols=43  Identities=23%  Similarity=0.153  Sum_probs=38.6

Q ss_pred             CCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEE
Q 017995          125 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV  167 (362)
Q Consensus       125 ~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~  167 (362)
                      .+-+++..+..+++.+|+++++|++|||+.+|+.+++.+|+.+
T Consensus       159 ~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~v  201 (244)
T 1s2o_A          159 QRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGV  201 (244)
T ss_dssp             TTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEE
T ss_pred             CCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEE
Confidence            3456788999999999999999999999999999999999864

>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*

Probab=94.99  E-value=0.19  Score=46.57  Aligned_cols=49  Identities=14%  Similarity=0.251  Sum_probs=39.4

Q ss_pred             CCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhh----cCCcCCCcEEEeC
Q 017995           69 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQ----HGWNESFSVIVGS  120 (362)
Q Consensus        69 ~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~----~gl~~~f~~iv~~  120 (362)
                      ..++|++.++++.|+++|+++.|+|.+++.+++.+- ..    .|+..  +.|+++
T Consensus       142 ~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a-~~~~~~ygIp~--e~ViG~  194 (327)
T 4as2_A          142 PRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVA-ADPRYGYNAKP--ENVIGV  194 (327)
T ss_dssp             CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-TCGGGSCCCCG--GGEEEE
T ss_pred             cccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH-hhcccccCCCH--HHeEee
Confidence            368999999999999999999999999999998766 44    34432  455553

>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10

Probab=94.98  E-value=0.018  Score=52.68  Aligned_cols=47  Identities=17%  Similarity=0.089  Sum_probs=40.3

Q ss_pred             CCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEEEcC
Q 017995          125 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS  172 (362)
Q Consensus       125 ~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~~  172 (362)
                      .+-+.+..+..+++.+|+++++|++|||+.+|+.+++.+|+.+ .+..
T Consensus       221 ~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~v-a~~n  267 (301)
T 2b30_A          221 LGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSF-AVAN  267 (301)
T ss_dssp             TTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEE-ECTT
T ss_pred             CCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeE-EEcC
Confidence            3445678999999999999999999999999999999999964 4443

>3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe}

Probab=94.28  E-value=0.021  Score=55.05  Aligned_cols=94  Identities=15%  Similarity=0.122  Sum_probs=68.9

Q ss_pred             CCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcC-CCcE-EEeCCCCCCCCCCHHHHHHHHHHc-CCCC
Q 017995           68 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE-SFSV-IVGSDEVRTGKPSPDIFLEAAKRL-NMEP  144 (362)
Q Consensus        68 ~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~-~f~~-iv~~~d~~~gKp~p~~~~~~~~~~-~~~p  144 (362)
                      .+.+.||+.++|+.+. +.|.+.|.|.+...++..++ +.++... +|.+ +++.++++..      +..-+.++ |.+.
T Consensus        81 ~V~~RPgl~eFL~~ls-~~yEivIfTas~~~YA~~Vl-~~LDp~~~~f~~Rl~sRd~cg~~------~~KdL~~ll~rdl  152 (442)
T 3ef1_A           81 YIKFRPGLAQFLQKIS-ELYELHIYTMGTKAYAKEVA-KIIDPTGKLFQDRVLSRDDSGSL------AQKSLRRLFPCDT  152 (442)
T ss_dssp             EEEECTTHHHHHHHHT-TTEEEEEECSSCHHHHHHHH-HHHCTTSTTTTTCEECTTTSSCS------SCCCGGGTCSSCC
T ss_pred             EEEeCCCHHHHHHHHh-CCcEEEEEcCCCHHHHHHHH-HHhccCCccccceEEEecCCCCc------eeeehHHhcCCCc
Confidence            3778999999999999 46999999999999999999 8888776 7876 6666665421      11123433 8899


Q ss_pred             CcEEEEecCHhhHHHHHHcCCEEEEEcCC
Q 017995          145 SSSLVIEDSVIGVVAGKAAGMEVVAVPSL  173 (362)
Q Consensus       145 ~~~l~igDs~~d~~aA~~aG~~~i~v~~~  173 (362)
                      +++++|.|++.-...   .. ..|.|.++
T Consensus       153 ~~vvIIDd~p~~~~~---~p-N~I~I~~~  177 (442)
T 3ef1_A          153 SMVVVIDDRGDVWDW---NP-NLIKVVPY  177 (442)
T ss_dssp             TTEEEEESCSGGGTT---CT-TEEECCCC
T ss_pred             ceEEEEECCHHHhCC---CC-CEEEcCCc
Confidence            999999999843321   13 56666553

>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*

Probab=94.20  E-value=0.12  Score=48.45  Aligned_cols=89  Identities=19%  Similarity=0.154  Sum_probs=62.5

Q ss_pred             CCCCCchHHHHHHHHHHCCCcEEEEcCCC---hHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCC
Q 017995           68 KVKALPGANRLIKHLSCHGVPMALASNSH---RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP  144 (362)
Q Consensus        68 ~~~~~pgv~~~L~~L~~~g~~~~i~S~~~---~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p  144 (362)
                      ...++||+.++|+.|++.|+++.++||++   .......|.+.+|+.-..+.|+++.....     . +.   +    ..
T Consensus        27 g~~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~~~~~~i~ts~~~~~-----~-~~---~----~~   93 (352)
T 3kc2_A           27 GKKPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVDVSPLQIIQSHTPYK-----S-LV---N----KY   93 (352)
T ss_dssp             TTEECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSCCCGGGEECTTGGGG-----G-GT---T----TC
T ss_pred             CCeeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCCCChhhEeehHHHHH-----H-HH---h----cC
Confidence            45688999999999999999999999975   23333455246888766678887754321     1 11   1    23


Q ss_pred             CcEEEEecCHhhHHHHHHcCCEEEEE
Q 017995          145 SSSLVIEDSVIGVVAGKAAGMEVVAV  170 (362)
Q Consensus       145 ~~~l~igDs~~d~~aA~~aG~~~i~v  170 (362)
                      ..+++||-. ...+..+++|++.+..
T Consensus        94 ~~v~viG~~-~l~~~l~~~G~~~v~~  118 (352)
T 3kc2_A           94 SRILAVGTP-SVRGVAEGYGFQDVVH  118 (352)
T ss_dssp             SEEEEESST-THHHHHHHHTCSEEEE
T ss_pred             CEEEEECCH-HHHHHHHhCCCeEecc
Confidence            677888755 4566788999998864

>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A

Probab=93.20  E-value=0.056  Score=47.80  Aligned_cols=62  Identities=10%  Similarity=-0.087  Sum_probs=44.4

Q ss_pred             CCHHHHHHHHHHcCC-CCCcEEEEecCHhhHHHHHHcCCEEEEEcCCCCccccccchhHhhcccc
Q 017995          128 PSPDIFLEAAKRLNM-EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLL  191 (362)
Q Consensus       128 p~p~~~~~~~~~~~~-~p~~~l~igDs~~d~~aA~~aG~~~i~v~~~~~~~~~~ssa~~vi~~l~  191 (362)
                      .....+..+++.+++ +++++++|||+.+|+.+.+.+|+.+ .+......... ..++.+..+..
T Consensus       179 sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~v-a~gna~~~~~~-~~a~~v~~~~~  241 (249)
T 2zos_A          179 DKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVF-IVGSLKHKKAQ-NVSSIIDVLEV  241 (249)
T ss_dssp             CHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEE-EESSCCCTTEE-EESSHHHHHHH
T ss_pred             ChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEE-EeCCCCccccc-hhceEEecccc
Confidence            345788999999998 9999999999999999999999974 44432211111 13456665544

>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10

Probab=91.97  E-value=0.074  Score=47.78  Aligned_cols=46  Identities=9%  Similarity=-0.056  Sum_probs=39.9

Q ss_pred             CCCCHHHHHHHHHHcC-CCCCc--EEEEecCHhhHHHHHHcCCEEEEEcC
Q 017995          126 GKPSPDIFLEAAKRLN-MEPSS--SLVIEDSVIGVVAGKAAGMEVVAVPS  172 (362)
Q Consensus       126 gKp~p~~~~~~~~~~~-~~p~~--~l~igDs~~d~~aA~~aG~~~i~v~~  172 (362)
                      +-+++..+..+++.++ +++++  +++|||+.+|+.+.+.+|+. +.+..
T Consensus       187 ~~~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~-va~~n  235 (275)
T 1xvi_A          187 SAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYA-VIVKG  235 (275)
T ss_dssp             TCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEE-EECCC
T ss_pred             CCCHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCce-EEecC
Confidence            4556788999999999 99999  99999999999999999996 55544

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=89.79  E-value=0.63  Score=41.05  Aligned_cols=86  Identities=28%  Similarity=0.373  Sum_probs=56.9

Q ss_pred             CCCchHHHHHHHHHHCCCcEEEEcCCChHhHH---HHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCc
Q 017995           70 KALPGANRLIKHLSCHGVPMALASNSHRATIE---SKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS  146 (362)
Q Consensus        70 ~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~---~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~  146 (362)
                      .++|++.++|+.|+++|+++.++||.+.....   ..| ..+|+....+.++++.         ......+++. ....+
T Consensus        17 ~~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l-~~lg~~~~~~~i~~~~---------~~~~~~l~~~-~~~~~   85 (263)
T 1zjj_A           17 RAIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKL-LKMGIDVSSSIIITSG---------LATRLYMSKH-LDPGK   85 (263)
T ss_dssp             EECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHH-HTTTCCCCGGGEEEHH---------HHHHHHHHHH-SCCCC
T ss_pred             EeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH-HHCCCCCChhhEEecH---------HHHHHHHHHh-CCCCE
Confidence            35689999999999999999999997653333   334 4567765556666642         2233333333 23467


Q ss_pred             EEEEecCHhhHHHHHHcCCEE
Q 017995          147 SLVIEDSVIGVVAGKAAGMEV  167 (362)
Q Consensus       147 ~l~igDs~~d~~aA~~aG~~~  167 (362)
                      +.++|+. .....+++.|+..
T Consensus        86 v~viG~~-~l~~~l~~~G~~~  105 (263)
T 1zjj_A           86 IFVIGGE-GLVKEMQALGWGI  105 (263)
T ss_dssp             EEEESCH-HHHHHHHHHTSCB
T ss_pred             EEEEcCH-HHHHHHHHcCCee
Confidence            8888874 5566677788754

>3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A

Probab=89.12  E-value=2.1  Score=37.76  Aligned_cols=91  Identities=13%  Similarity=0.178  Sum_probs=63.2

Q ss_pred             HHHHHHHHHHCC-CcEEEEcCCChHh-HHHHHHhhcCCcCCCc--EEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEE
Q 017995           75 ANRLIKHLSCHG-VPMALASNSHRAT-IESKISYQHGWNESFS--VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVI  150 (362)
Q Consensus        75 v~~~L~~L~~~g-~~~~i~S~~~~~~-i~~~L~~~~gl~~~f~--~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~i  150 (362)
                      +..+|.....+. .--.++|++.-.- +.+.|  ..+|...|.  .|.++-.++    ....|..+.+++| +...-++|
T Consensus       164 a~k~L~~i~sr~~~vNVLVTs~qLVPaLaK~L--LygL~~~fpieNIYSa~kiG----KesCFerI~~RFG-~k~~yvvI  236 (274)
T 3geb_A          164 SLKALNLINSRPNCVNVLVTTTQLIPALAKVL--LYGLGSVFPIENIYSATKTG----KESCFERIMQRFG-RKAVYVVI  236 (274)
T ss_dssp             HHHHHHHHHHSTTEEEEEEESSCHHHHHHHHH--HTTCTTTSCGGGEEETTTTC----HHHHHHHHHHHHC-TTSEEEEE
T ss_pred             HHHHHHhhccCCceeEEEEecCchHHHHHHHH--HhhcccceecccccchhhcC----HHHHHHHHHHHhC-CCceEEEE
Confidence            344555444332 2235666665432 22233  467877775  588876653    4589999999997 55778888


Q ss_pred             ecCHhhHHHHHHcCCEEEEEcC
Q 017995          151 EDSVIGVVAGKAAGMEVVAVPS  172 (362)
Q Consensus       151 gDs~~d~~aA~~aG~~~i~v~~  172 (362)
                      ||..-..+||+..+++++-|..
T Consensus       237 GDG~eEe~AAk~~n~PFwrI~~  258 (274)
T 3geb_A          237 GDGVEEEQGAKKHNMPFWRISC  258 (274)
T ss_dssp             ESSHHHHHHHHHTTCCEEECCS
T ss_pred             CCCHHHHHHHHHcCCCeEEeec
Confidence            9999999999999999998866

>3glv_A Lipopolysaccharide core biosynthesis protein; structural GEN PSI, MCSG, protein structure initiative; HET: AMP; 1.99A {Thermoplasma volcanium GSS1}

Probab=86.01  E-value=1.5  Score=35.20  Aligned_cols=80  Identities=9%  Similarity=0.013  Sum_probs=36.2

Q ss_pred             HHHHHHHHCC-CcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHh
Q 017995           77 RLIKHLSCHG-VPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVI  155 (362)
Q Consensus        77 ~~L~~L~~~g-~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~  155 (362)
                      +=++.+++.| +...++- ++++|++ .+ +.++.    +.++.|.|+.++   .+.+.                     
T Consensus        55 eR~~~l~~~~~vd~v~~~-~~~~f~~-~~-~~l~~----~~iv~G~d~~f~---~~~l~---------------------  103 (143)
T 3glv_A           55 SRLALISELKVVDRAILG-HEGDMMK-TV-IEVKP----DIITLGYDQKFD---EAELQ---------------------  103 (143)
T ss_dssp             HHHHHHTTBTTCSEEEEC-CTTCHHH-HH-HHHCC----SEEEECTTCHHH---HHHHH---------------------
T ss_pred             HHHHHHHhcCCCCEEEEc-CchhHHH-HH-HhcCC----CEEEECCCCCCC---HHHHH---------------------
Confidence            3334555554 5554443 4445664 44 55554    677777777552   22222                     


Q ss_pred             hHHHHHHcCCEEEEEcCCCCccccccchhHhhcccc
Q 017995          156 GVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLL  191 (362)
Q Consensus       156 d~~aA~~aG~~~i~v~~~~~~~~~~ssa~~vi~~l~  191 (362)
                        +.+.+.|+.+..++....++..+||  +.|+.++
T Consensus       104 --~~~~~~g~~v~vv~~~~~~~~~iSS--T~IR~~i  135 (143)
T 3glv_A          104 --SKINKLGITVKIVRISKYDGQLNSS--SSVRKKI  135 (143)
T ss_dssp             --HHHHHHTCCCEEEECCCCC---------------
T ss_pred             --HHHHHcCCeEEEEEeeccCCCcCCH--HHHHHHH
Confidence              2255678887777665444555553  4444443

>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25

Probab=85.36  E-value=0.61  Score=37.64  Aligned_cols=40  Identities=18%  Similarity=0.053  Sum_probs=31.0

Q ss_pred             CCCchHHHHHHHHHHCCCcEEEEcCCChH---hHHHHHHhhcCC
Q 017995           70 KALPGANRLIKHLSCHGVPMALASNSHRA---TIESKISYQHGW  110 (362)
Q Consensus        70 ~~~pgv~~~L~~L~~~g~~~~i~S~~~~~---~i~~~L~~~~gl  110 (362)
                      ++.|++.++|+.|+++|+.+.++|+.+..   .+...+ +.+|+
T Consensus        24 ~~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l-~~~gi   66 (142)
T 2obb_A           24 EEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWC-RARGL   66 (142)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHH-HTTTC
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHH-HHcCC
Confidence            45689999999999999999999998743   333344 55666

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}

Probab=85.31  E-value=0.97  Score=40.20  Aligned_cols=52  Identities=17%  Similarity=0.225  Sum_probs=41.1

Q ss_pred             CCCCchHHHHHHHHHHCCCcEEEEcC---CChHhHHHHHHhhcCCc-CCCcEEEeCC
Q 017995           69 VKALPGANRLIKHLSCHGVPMALASN---SHRATIESKISYQHGWN-ESFSVIVGSD  121 (362)
Q Consensus        69 ~~~~pgv~~~L~~L~~~g~~~~i~S~---~~~~~i~~~L~~~~gl~-~~f~~iv~~~  121 (362)
                      ..++|++.+.|+.|+++|+++.++||   .+...+...+ +.+|+. ..++.++++.
T Consensus        29 ~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l-~~lg~~~~~~~~ii~~~   84 (284)
T 2hx1_A           29 NGLLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSY-HKLGLFSITADKIISSG   84 (284)
T ss_dssp             TEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHH-HHTTCTTCCGGGEEEHH
T ss_pred             CeeChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHH-HHCCcCCCCHhhEEcHH
Confidence            45689999999999999999999998   4555566677 778887 6667777653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	362
d1nb9a_	147	b.43.5.1 (A:) Riboflavin kinase {Human (Homo sapie	2e-42
d1n08a_	154	b.43.5.1 (A:) Riboflavin kinase {Fission yeast (Sc	9e-42
d1mrza1	130	b.43.5.1 (A:159-288) Riboflavin kinase domain of b	2e-28
d1zs9a1	253	c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapien	4e-16
d1cr6a1	222	c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal	4e-14
d1qyia_	380	c.108.1.13 (A:) Hypothetical protein MW1667 (SA154	1e-13
d2b0ca1	197	c.108.1.2 (A:8-204) Putative phosphatase YihX {Esc	1e-13
d1zd3a1	225	c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal	9e-13
d1te2a_	218	c.108.1.6 (A:) Phosphatase YniC {Escherichia coli	1e-11
d1u7pa_	164	c.108.1.17 (A:) Magnesium-dependent phosphatase-1,	3e-11
d2fdra1	222	c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {	1e-10
d1o08a_	221	c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcu	7e-10
d1swva_	257	c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Ba	2e-09
d2g80a1	225	c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast	4e-09
d1zrna_	220	c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pse	1e-08
d2fi1a1	187	c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Str	1e-08
d1qq5a_	245	c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xan	2e-08
d2go7a1	204	c.108.1.6 (A:3-206) Hypothetical protein SP2064 {S	4e-07
d2feaa1	226	c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio	5e-07
d2hdoa1	207	c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {	9e-07
d2hsza1	224	c.108.1.6 (A:1-224) Phosphoglycolate phosphatase G	6e-06
d2hcfa1	228	c.108.1.6 (A:2-229) Hypothetical protein CT1708 {C	2e-05
d2fpwa1	161	c.108.1.19 (A:3-163) Histidine biosynthesis bifunc	3e-05
d1x42a1	230	c.108.1.1 (A:1-230) Hypothetical protein PH0459 {A	8e-04
d2gfha1	247	c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatas	0.002
d2o2xa1	209	c.108.1.19 (A:8-216) Hypothetical protein Mll2559	0.004

>d1nb9a_ b.43.5.1 (A:) Riboflavin kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 147

class: All beta proteins
fold: Reductase/isomerase/elongation factor common domain
superfamily: Riboflavin kinase-like
family: ATP-dependent riboflavin kinase-like
domain: Riboflavin kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  142 bits (360), Expect = 2e-42
 Identities = 67/141 (47%), Positives = 101/141 (71%)

Query: 215 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMS 274
           P++  G VV+G GRGSK LGIPTAN   +   ++ ++  +G+Y+GWA + +  V+KMV+S
Sbjct: 4   PYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADISTGIYYGWASVGSGDVHKMVVS 63

Query: 275 IGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRK 334
           IGWNPY+ N +K++E  ++H F EDFY E L++ IVGY+RPE NF SLE+LI+ I  D +
Sbjct: 64  IGWNPYYKNTKKSMETHIMHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDIE 123

Query: 335 VAERALDLPLYSKYRDDPYLK 355
            A++ L+LP Y K ++D + +
Sbjct: 124 EAKKRLELPEYLKIKEDNFFQ 144

>d1n08a_ b.43.5.1 (A:) Riboflavin kinase {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 154

class: All beta proteins
fold: Reductase/isomerase/elongation factor common domain
superfamily: Riboflavin kinase-like
family: ATP-dependent riboflavin kinase-like
domain: Riboflavin kinase
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score =  141 bits (356), Expect = 9e-42
 Identities = 70/162 (43%), Positives = 99/162 (61%), Gaps = 8/162 (4%)

Query: 194 RPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHP 253
           RPE  G     + ++      P    G VV G GRGSK LGIPTAN+S +   ++L    
Sbjct: 1   RPEIVG----PEKVQ---SPYPIRFEGKVVHGFGRGSKELGIPTANISEDAIQELLRYRD 53

Query: 254 SGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYI 313
           SGVYFG+  +  + V+ MVMS+GWNPY+ N  ++ E  L+    EDFY+E + ++++GYI
Sbjct: 54  SGVYFGY-AMVQKRVFPMVMSVGWNPYYKNKLRSAEVHLIERQGEDFYEEIMRVIVLGYI 112

Query: 314 RPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYLK 355
           RPE N+  L+ LI  IH D +VA  ++D P YS Y+ DP+ K
Sbjct: 113 RPELNYAGLDKLIEDIHTDIRVALNSMDRPSYSSYKKDPFFK 154

>d1mrza1 b.43.5.1 (A:159-288) Riboflavin kinase domain of bifunctional FAD synthetase {Thermotoga maritima [TaxId: 2336]} Length = 130

class: All beta proteins
fold: Reductase/isomerase/elongation factor common domain
superfamily: Riboflavin kinase-like
family: ATP-dependent riboflavin kinase-like
domain: Riboflavin kinase domain of bifunctional FAD synthetase
species: Thermotoga maritima [TaxId: 2336]

 Score =  105 bits (263), Expect = 2e-28
 Identities = 41/132 (31%), Positives = 60/132 (45%), Gaps = 3/132 (2%)

Query: 216 WYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSI 275
           + I G V K    G K LG PTAN+       V  +   GVY     L        VM++
Sbjct: 2   FEIEGIVHKDREFGRK-LGFPTANIDRGNEKLV--DLKRGVYLVRVHLPDGKKKFGVMNV 58

Query: 276 GWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKV 335
           G+ P   +A        + +F+ D Y + L L ++ ++R E  F S+E L A I +D K 
Sbjct: 59  GFRPTVGDARNVKYEVYILDFEGDLYGQRLKLEVLKFMRDEKKFDSIEELKAAIDQDVKS 118

Query: 336 AERALDLPLYSK 347
           A   +D  + SK
Sbjct: 119 ARNMIDDIINSK 130

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} Length = 253

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

 Score = 75.2 bits (183), Expect = 4e-16
 Identities = 19/135 (14%), Positives = 41/135 (30%), Gaps = 2/135 (1%)

Query: 61  MFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGS 120
            F+    K +        ++     G+ + + S+      +    +    +    V    
Sbjct: 118 AFTAGRMKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHF 177

Query: 121 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV--PSLPKQTH 178
           D     K   + + + A  +    ++ L + D      A + A + V  V  P     T 
Sbjct: 178 DTKIGHKVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTD 237

Query: 179 RYTAADEVINSLLDL 193
                  +I S  +L
Sbjct: 238 DEKTYYSLITSFSEL 252

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 222

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 68.6 bits (166), Expect = 4e-14
 Identities = 21/157 (13%), Positives = 52/157 (33%), Gaps = 6/157 (3%)

Query: 19  KEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRL 78
           +   G+           E      +  G    ++  +++++S                + 
Sbjct: 49  QLMKGKITFSQWVPLMDESYRKSSKACGANLPENFSISQIFSQAMAAR---SINRPMLQA 105

Query: 79  IKHLSCHGVPMALASNSHRATIESKISY---QHGWNESFSVIVGSDEVRTGKPSPDIFLE 135
              L   G    + +N+     + + S        ++ F  ++ S +V   KP P I+  
Sbjct: 106 AIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGMIKPEPQIYNF 165

Query: 136 AAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 172
               L  +P+  + ++D    +   +  GM  + V +
Sbjct: 166 LLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILVHN 202

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

 Score = 69.4 bits (169), Expect = 1e-13
 Identities = 28/205 (13%), Positives = 59/205 (28%), Gaps = 34/205 (16%)

Query: 22  DGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKH 81
             +     + +   +E  +  + Y     K        + +      ++ +     L+  
Sbjct: 168 SLKGALWTLAQEVYQEWYLGSKLYE-DVEKKIARTTFKTGYIYQEIILRPVDEVKVLLND 226

Query: 82  LSCHGVPMALASNSHRATIESKISYQHGWNESF--SVIVGSDEVRTG-----------KP 128
           L   G  + +A+               G    F    I  + +V              KP
Sbjct: 227 LKGAGFELGIATGRPYTETV-VPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKP 285

Query: 129 SPDIFLEAAKRLNME--------------PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 174
           +P  ++ A    N +                   ++ DS+  +++ +  G   +   +  
Sbjct: 286 NPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGL 345

Query: 175 KQTH-----RYTAADEVINSLLDLR 194
           K            AD VIN L +LR
Sbjct: 346 KGKDAAGELEAHHADYVINHLGELR 370

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} Length = 197

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

 Score = 66.7 bits (161), Expect = 1e-13
 Identities = 24/178 (13%), Positives = 54/178 (30%), Gaps = 8/178 (4%)

Query: 1   MTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLE------EAAIIVEDYGLPCAKHEF 54
           + D  F+ VL  +           +K   +G+   +            E      A    
Sbjct: 11  IVDIDFNRVLGAWSDLTRIPLASLKKSFHMGEAFHQHERGEISDEAFAEALCHEMALPLS 70

Query: 55  VNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF 114
             +    +      ++  P    ++  L   G  + + SN++R              ++ 
Sbjct: 71  YEQFSHGWQAVFVALR--PEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAA 128

Query: 115 SVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 172
             I  S ++   KP   I+    +     PS ++  +D+   +      G+  + V  
Sbjct: 129 DHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKD 186

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 225

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.8 bits (156), Expect = 9e-13
 Identities = 25/159 (15%), Positives = 46/159 (28%), Gaps = 6/159 (3%)

Query: 17  YGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGAN 76
             +   G            E      E   +   K+  + E+   F   +   K      
Sbjct: 49  TTRLMKGEITLSQWIPLMEENCRKCSETAKVCLPKNFSIKEI---FDKAISARKINRPML 105

Query: 77  RLIKHLSCHGVPMALASNSHRATIESKISY---QHGWNESFSVIVGSDEVRTGKPSPDIF 133
           +    L   G   A+ +N+       +             F  ++ S +V   KP P I+
Sbjct: 106 QAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIY 165

Query: 134 LEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 172
                 L   PS  + ++D    +   +  GM  + V  
Sbjct: 166 KFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQD 204

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} Length = 218

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

 Score = 61.4 bits (147), Expect = 1e-11
 Identities = 36/198 (18%), Positives = 82/198 (41%), Gaps = 3/198 (1%)

Query: 2   TDGMFSEVLKTFLVKYGKEWDGRE--KHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVY 59
           ++ ++       +   G +   R      +  +  +              ++ E V  V 
Sbjct: 17  SEPLWDRAELDVMASLGVDISRRNELPDTLGLRIDMVVDLWYARQPWNGPSRQEVVERVI 76

Query: 60  SMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVG 119
           +     + + + L    R    L      +   +++    +  K+       +SF  +  
Sbjct: 77  ARAISLVEETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALAS 136

Query: 120 SDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH- 178
           ++++   KP P ++L+ A +L ++P + + +EDSV G++A KAA M  + VP+   Q   
Sbjct: 137 AEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDP 196

Query: 179 RYTAADEVINSLLDLRPE 196
           R+  A+  ++SL +L  +
Sbjct: 197 RFVLANVKLSSLTELTAK 214

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 164

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 59.1 bits (142), Expect = 3e-11
 Identities = 16/131 (12%), Positives = 37/131 (28%), Gaps = 12/131 (9%)

Query: 70  KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPS 129
           +  P    ++  L   GVP+A AS +      +++       + F               
Sbjct: 46  QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFIQREIYP-----GSK 100

Query: 130 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINS 189
              F     +  +  S  +  +D    ++     G+  + +          +    +   
Sbjct: 101 VTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTCIHIR------DGMS-LQTLTQG 153

Query: 190 LLDLRPEKWGL 200
           L      + GL
Sbjct: 154 LETFAKAQAGL 164

>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} Length = 222

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein Atu0790
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 58.3 bits (139), Expect = 1e-10
 Identities = 36/198 (18%), Positives = 66/198 (33%), Gaps = 6/198 (3%)

Query: 2   TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSM 61
           ++ + ++V    L + G      E  +       +   + VE           +++   +
Sbjct: 16  SEIIAAQVESRLLTEAGYPISVEEMGERFAGMTWKNILLQVESEASIPLSASLLDKSEKL 75

Query: 62  FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD 121
               L +   +    +           +   S+SHR  +         +           
Sbjct: 76  LDMRLERDVKIIDGVKFALSRLTTPRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDL 135

Query: 122 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS------LPK 175
                KP PDIFL  A +  + P   +V+EDSV G+   +AAGM V+             
Sbjct: 136 GADRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHA 195

Query: 176 QTHRYTAADEVINSLLDL 193
                  A+ VI+ + DL
Sbjct: 196 DRLTDAGAETVISRMQDL 213

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} Length = 221

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

 Score = 56.4 bits (134), Expect = 7e-10
 Identities = 43/202 (21%), Positives = 71/202 (35%), Gaps = 14/202 (6%)

Query: 2   TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFV------ 55
           T        K    + G     R+ ++ +     E++   + D        E        
Sbjct: 16  TAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLADKKVSAEEFKELAKR 75

Query: 56  -NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF 114
            N+ Y      +      PG  +L+K L  + + +ALAS S        +  +      F
Sbjct: 76  KNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASKNGPF---LLERMNLTGYF 132

Query: 115 SVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 174
             I    EV   KP+PDIF+ AA  + + PS S+ +EDS  G+ A K +G   + V    
Sbjct: 133 DAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGR-- 190

Query: 175 KQTHRYTAADEVINSLLDLRPE 196
                      ++        E
Sbjct: 191 --PEDLGDDIVIVPDTSHYTLE 210

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} Length = 257

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

 Score = 55.6 bits (132), Expect = 2e-09
 Identities = 29/178 (16%), Positives = 56/178 (31%), Gaps = 15/178 (8%)

Query: 8   EVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLC 67
           EV      K G      E  K +G   ++    + E   +    +    ++ +       
Sbjct: 23  EVFMEIFHKRGVAITAEEARKPMGLLKIDHVRALTEMPRIASEWNRVFRQLPTEADIQEM 82

Query: 68  --------------KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNES 113
                             + G   +I  L   G+ +   +   R  ++            
Sbjct: 83  YEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYK 142

Query: 114 FSVIVGSDEVRTGKPSPDIFLEAAKRLN-MEPSSSLVIEDSVIGVVAGKAAGMEVVAV 170
              +V  D+V  G+P P +  + A  L     +  + + D+V  +  G+ AGM  V V
Sbjct: 143 PDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGV 200

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 225

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 54.0 bits (128), Expect = 4e-09
 Identities = 18/199 (9%), Positives = 47/199 (23%), Gaps = 12/199 (6%)

Query: 6   FSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAA-----IIVEDYGLPCAKHEFVNEVYS 60
           F+  +   + +  ++               E+       ++ +D   P  K         
Sbjct: 28  FTNKVPQLVQQDTRDSPVSNILSQFHIDNKEQLQAHILELVAKDVKDPILKQLQGYVWAH 87

Query: 61  MFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIE------SKISYQHGWNESF 114
            +     K      A   IK      +  + +  + +          +        N   
Sbjct: 88  GYESGQIKAPVYADAIDFIKRKKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYI 147

Query: 115 SVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 174
                 +     K     +    + +  + S  L + D+ + + A    G+         
Sbjct: 148 DGYFDIN-TSGKKTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRPG 206

Query: 175 KQTHRYTAADEVINSLLDL 193
                     +V  +   L
Sbjct: 207 NAPVPDGQKYQVYKNFETL 225

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} Length = 220

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

 Score = 52.6 bits (124), Expect = 1e-08
 Identities = 23/162 (14%), Positives = 53/162 (32%), Gaps = 2/162 (1%)

Query: 33  TPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALA 92
              ++A      +       +      S   D   ++         ++ L   G+ +A+ 
Sbjct: 56  VNFQQATEDALRFTCRHLGLDLDARTRSTLCDAYLRLAPFSEVPDSLRELKRRGLKLAIL 115

Query: 93  SNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIED 152
           SN    +I+  +    G  + F  ++  D V+  KP   ++  A + L ++ S+ L +  
Sbjct: 116 SNGSPQSID-AVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAILFVAS 174

Query: 153 SVIGVVAGKAAGMEVVAVPSLPKQTHRY-TAADEVINSLLDL 193
           +       +  G     +              D  + SL  +
Sbjct: 175 NAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAV 216

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} Length = 187

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 51.6 bits (122), Expect = 1e-08
 Identities = 29/171 (16%), Positives = 53/171 (30%), Gaps = 10/171 (5%)

Query: 2   TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSM 61
                +      L  YG   D    ++ +  +                    F+ +    
Sbjct: 17  NYETSTAAFVETLALYGITQDHDSVYQALKVSTPFA------IETFAPNLENFLEKYKEN 70

Query: 62  FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD 121
            +  L       G + L++ +S  G    L S+ +   +E           +  V   S 
Sbjct: 71  EARELEHPILFEGVSDLLEDISNQGGRHFLVSHRNDQVLEILEKTSIAAYFTEVVTSSSG 130

Query: 122 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 172
             R   P  +  L   ++  +     LVI D  I + AG+AAG++     S
Sbjct: 131 FKRKPNP--ESMLYLREKYQISSG--LVIGDRPIDIEAGQAAGLDTHLFTS 177

>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} Length = 245

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Xanthobacter autotrophicus [TaxId: 280]

 Score = 52.5 bits (124), Expect = 2e-08
 Identities = 30/160 (18%), Positives = 54/160 (33%), Gaps = 12/160 (7%)

Query: 48  PCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQ 107
                 F+ ++   ++       A      L           A+ SN     ++  +   
Sbjct: 75  LEPDESFLADMAQAYNRLTPYPDAAQCLAELAPL------KRAILSNGAPDMLQ-ALVAN 127

Query: 108 HGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV 167
            G  +SF  ++  D  R  KP PD +    + L + P+  L +  +   V   K  G  V
Sbjct: 128 AGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSV 187

Query: 168 VAV-----PSLPKQTHRYTAADEVINSLLDLRPEKWGLPP 202
             V      +L ++    T A   +   L +R E +   P
Sbjct: 188 ARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAP 227

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} Length = 204

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 47.9 bits (112), Expect = 4e-07
 Identities = 22/194 (11%), Positives = 63/194 (32%), Gaps = 9/194 (4%)

Query: 2   TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSM 61
           +       ++    ++   +D  +  + + K  +++  + V +      +          
Sbjct: 15  SYEAILSGIEETFAQFSIPYDKEKVREFIFKYSVQDLLVRVAEDRNLDVEV-LNQVRAQS 73

Query: 62  FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD 121
            ++   +V  +PGA  ++      G+   + ++                  +  +   S 
Sbjct: 74  LAEKNAQVVLMPGAREVLAWADESGIQQFIYTHKGNNAFTILKDLGVESYFTEILTSQSG 133

Query: 122 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYT 181
            VR  KPSP+       +  +   ++  I D  + V   + +G++ +             
Sbjct: 134 FVR--KPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINF------LESTY 185

Query: 182 AADEVINSLLDLRP 195
             +  I +L D+  
Sbjct: 186 EGNHRIQALADISR 199

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

 Score = 47.7 bits (112), Expect = 5e-07
 Identities = 24/215 (11%), Positives = 58/215 (26%), Gaps = 21/215 (9%)

Query: 7   SEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHL 66
           ++ +   +  +       E   +      +  +I      +       + E  + F    
Sbjct: 18  NDNIINIMKTFAPP----EWMALKDGVLSKTLSIKEGVGRMFGLLPSSLKEEITSFVLED 73

Query: 67  CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF---SVIVGSDEV 123
            K++   G    +  ++ H +P  + S          +       +          +D +
Sbjct: 74  AKIR--EGFREFVAFINEHEIPFYVISGGMD-FFVYPLLEGIVEKDRIYCNHASFDNDYI 130

Query: 124 RT----------GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL 173
                                     L+      ++I DSV  V A K + +   A   L
Sbjct: 131 HIDWPHSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDL-CFARDYL 189

Query: 174 PKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIE 208
             +               ++R E   +   Q+W++
Sbjct: 190 LNECREQNLNHLPYQDFYEIRKEIENVKEVQEWLQ 224

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} Length = 207

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

 Score = 46.8 bits (109), Expect = 9e-07
 Identities = 33/192 (17%), Positives = 65/192 (33%), Gaps = 5/192 (2%)

Query: 2   TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSM 61
           +   ++ V++  L  YGK +   +  K            + E          F  +   +
Sbjct: 17  SQPAYTTVMREVLATYGKPFSPAQAQKTFPMAA---EQAMTELGIAASEFDHFQAQYEDV 73

Query: 62  FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD 121
            + H  +++  PG   L + L            S R          + +    +V + +D
Sbjct: 74  MASHYDQIELYPGITSLFEQLPSELRLGI--VTSQRRNELESGMRSYPFMMRMAVTISAD 131

Query: 122 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYT 181
           +    KP P   L A +++N+ P ++L I DSV      +AA ++             + 
Sbjct: 132 DTPKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQ 191

Query: 182 AADEVINSLLDL 193
                    LD+
Sbjct: 192 KVAHRFQKPLDI 203

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} Length = 224

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

 Score = 44.5 bits (103), Expect = 6e-06
 Identities = 29/203 (14%), Positives = 62/203 (30%), Gaps = 12/203 (5%)

Query: 2   TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSM 61
           +    +  + + L                     +  +    D+    A+ E   + +  
Sbjct: 18  SLPDLALSINSALKDVNLPQASENLVMTWIGNGADVLSQRAVDWACKQAEKELTEDEFKY 77

Query: 62  FSD---------HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE 112
           F                +  P     ++ L   G  +A+ +N     ++  +    G + 
Sbjct: 78  FKRQFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPIL-TAFGIDH 136

Query: 113 SFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 172
            FS ++G   +   KP P  F     +  + P   L + DS   + A  +AG  VV +  
Sbjct: 137 LFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTY 196

Query: 173 --LPKQTHRYTAADEVINSLLDL 193
                     +  D + +   D+
Sbjct: 197 GYNYNIPIAQSKPDWIFDDFADI 219

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} Length = 228

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

 Score = 43.2 bits (100), Expect = 2e-05
 Identities = 30/204 (14%), Positives = 59/204 (28%), Gaps = 12/204 (5%)

Query: 2   TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAK-HEFVNEVYS 60
            + M   VL   L++          H   GK        ++ + GL  A+  +  ++   
Sbjct: 16  VESMNRRVLADALIEVYGTEGSTGSHDFSGKMDGAIIYEVLSNVGLERAEIADKFDKAKE 75

Query: 61  MFSDHL------CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF 114
            +            +  L G   L+  LS     +      +            G +  F
Sbjct: 76  TYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYF 135

Query: 115 SVIVGSDEVRTGKPSPDIFLEAA---KRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVP 171
                +D+       P I LE A      N  PS  ++I D+   +   +      +AV 
Sbjct: 136 PFGAFADDALDRNELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVA 195

Query: 172 S--LPKQTHRYTAADEVINSLLDL 193
           +     +         +  +  + 
Sbjct: 196 TGNFTMEELARHKPGTLFKNFAET 219

>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} Length = 161

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain
species: Escherichia coli [TaxId: 562]

 Score = 41.4 bits (96), Expect = 3e-05
 Identities = 17/129 (13%), Positives = 32/129 (24%), Gaps = 17/129 (13%)

Query: 59  YSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRA-----------------TIE 101
                D   K+   PG    +  L   G  + + +N                        
Sbjct: 19  SDFQVDRFDKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQI 78

Query: 102 SKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGK 161
                           + +DE    KP   +         M+ ++S VI D    +   +
Sbjct: 79  FTSQGVQFDEVLICPHLPADECDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAE 138

Query: 162 AAGMEVVAV 170
             G+  +  
Sbjct: 139 NMGINGLRY 147

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 230

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

 Score = 38.3 bits (87), Expect = 8e-04
 Identities = 20/158 (12%), Positives = 49/158 (31%), Gaps = 5/158 (3%)

Query: 36  EEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNS 95
           E    + E YG    +  F      M   +    +  P    ++K L      + + ++S
Sbjct: 70  EVMRKLAEKYGFKYPE-NFWEIHLRMHQRYG---ELYPEVVEVLKSLKGK-YHVGMITDS 124

Query: 96  HRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVI 155
               + + +      +   S+    +            L   K       +  V ++ V 
Sbjct: 125 DTEYLMAHLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVYVGDNPVK 184

Query: 156 GVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 193
                K  GM  + +    ++   +   D +++ L ++
Sbjct: 185 DCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREV 222

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} Length = 247

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.8 bits (83), Expect = 0.002
 Identities = 20/156 (12%), Positives = 50/156 (32%), Gaps = 6/156 (3%)

Query: 42  VEDYGLPCAKHEFVNEVYSMFSDHLCK-VKALPGANRLIKHLSCHGVPMALASNSHRATI 100
           +++        +   E Y ++     + +        ++  L      + L +   +   
Sbjct: 80  IQETKGGADNRKLAEECYFLWKSTRLQHMILADDVKAMLTELRKEVRLLLLTNGDRQTQR 139

Query: 101 ESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVI-GVVA 159
           E   +          VI G  +     PS          L ++P   +++ D++   +  
Sbjct: 140 EKIEACACQSYFDAIVIGGEQKEEKPAPSIFYH--CCDLLGVQPGDCVMVGDTLETDIQG 197

Query: 160 GKAAGMEVVAV--PSLPKQTHRYTAADEVINSLLDL 193
           G  AG++       S             +++S+L+L
Sbjct: 198 GLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLEL 233

>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} Length = 209

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Hypothetical protein Mll2559
species: Mesorhizobium loti [TaxId: 381]

 Score = 35.7 bits (81), Expect = 0.004
 Identities = 27/163 (16%), Positives = 52/163 (31%), Gaps = 13/163 (7%)

Query: 40  IIVEDYGLPCAKHEFV-----NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASN 94
            I  D   P    E V         +  +     V  +   + + +         A+   
Sbjct: 33  TINVDTDYPSDPAEIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGR 92

Query: 95  SHR----ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVI 150
                    +   +     ++E+    +   +    KP+P + +EA KRL ++   SL++
Sbjct: 93  VLELLREEGVFVDMVLACAYHEAGVGPLAIPDHPMRKPNPGMLVEAGKRLALDLQRSLIV 152

Query: 151 EDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 193
            D +  + AGK AG+    +                I  L D 
Sbjct: 153 GDKLADMQAGKRAGLAQGWLVD----GEAAVQPGFAIRPLRDS 191

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	362
d1nb9a_	147	Riboflavin kinase {Human (Homo sapiens) [TaxId: 96	100.0
d1n08a_	154	Riboflavin kinase {Fission yeast (Schizosaccharomy	100.0
d1mrza1	130	Riboflavin kinase domain of bifunctional FAD synth	100.0
d1te2a_	218	Phosphatase YniC {Escherichia coli [TaxId: 562]}	99.93
d2hdoa1	207	Phosphoglycolate phosphatase {Lactobacillus planta	99.92
d2go7a1	204	Hypothetical protein SP2064 {Streptococcus pneumon	99.9
d1swva_	257	Phosphonoacetaldehyde hydrolase {Bacillus cereus [	99.88
d2hsza1	224	Phosphoglycolate phosphatase Gph {Haemophilus somn	99.87
d2fi1a1	187	Putative hydrolase SP0805 {Streptococcus pneumonia	99.87
d1o08a_	221	beta-Phosphoglucomutase {Lactococcus lactis [TaxId	99.86
d2fdra1	222	Hypothetical protein Atu0790 {Agrobacterium tumefa	99.85
d2ah5a1	210	predicted phosphatase SP0104 {Streptococcus pneumo	99.84
d2hcfa1	228	Hypothetical protein CT1708 {Chlorobium tepidum [T	99.84
d1x42a1	230	Hypothetical protein PH0459 {Archaeon Pyrococcus h	99.8
d2gfha1	247	N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m	99.78
d1zrna_	220	L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s	99.78
d1zs9a1	253	E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}	99.77
d1qq5a_	245	L-2-Haloacid dehalogenase, HAD {Xanthobacter autot	99.72
d1cr6a1	222	Epoxide hydrolase, N-terminal domain {Mouse (Mus m	99.68
d1zd3a1	225	Epoxide hydrolase, N-terminal domain {Human (Homo	99.67
d1u7pa_	164	Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu	99.67
d2fpwa1	161	Histidine biosynthesis bifunctional protein HisB,	99.64
d2b0ca1	197	Putative phosphatase YihX {Escherichia coli [TaxId	99.63
d2g80a1	225	Protein UTR4 {Baker's yeast (Saccharomyces cerevis	99.6
d2gmwa1	182	D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc	99.57
d2o2xa1	209	Hypothetical protein Mll2559 {Mesorhizobium loti [	99.57
d1qyia_	380	Hypothetical protein MW1667 (SA1546) {Staphylococc	99.49
d2c4na1	250	NagD {Escherichia coli [TaxId: 562]}	99.23
d2feaa1	226	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	99.17
d1wvia_	253	Putative phosphatase SMU.1415c {Streptococcus muta	99.15
d1vjra_	261	Hypothetical protein TM1742 {Thermotoga maritima [	99.14
d1nnla_	217	Phosphoserine phosphatase {Human (Homo sapiens) [T	98.98
d1yv9a1	253	Putative hydrolase EF1188 {Enterococcus faecalis [	98.94
d1ltqa1	149	Polynucleotide kinase, phosphatase domain {Bacteri	98.89
d1yj5a1	195	5' polynucleotide kinase-3' phosphatase, middle do	98.72
d1j97a_	210	Phosphoserine phosphatase {Archaeon Methanococcus	98.57
d2b8ea1	135	Cation-transporting ATPase {Archaeon Archaeoglobus	97.7
d2b82a1	209	Class B acid phosphatase, AphA {Escherichia coli [	97.68
d2bdea1	458	Cytosolic IMP-GMP specific 5'-nucleotidase {Legion	97.57
d2bdua1	291	Cytosolic 5'-nucleotidase III {Mouse (Mus musculus	97.52
d1mrza2	157	FMN adenylyltransferase domain of bifunctional FAD	97.37
d1k1ea_	177	Probable phosphatase YrbI {Haemophilus influenzae,	97.37
d1wr8a_	230	Phosphoglycolate phosphatase, PGPase {Pyrococcus h	97.31
d1rkua_	206	Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta	97.29
d1wpga2	168	Calcium ATPase, catalytic domain P {Rabbit (Orycto	97.05
d1l6ra_	225	Phosphoglycolate phosphatase, PGPase {Archaeon The	96.78
d1nrwa_	285	Hypothetical protein YwpJ {Bacillus subtilis [TaxI	96.49
d1rkqa_	271	Hypothetical protein YidA {Escherichia coli [TaxId	96.39
d1ta0a_	181	Carboxy-terminal domain RNA polymerase II polypept	95.83
d1q92a_	195	5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo	94.81
d1rlma_	269	Sugar phosphatase SupH (YbiV) {Escherichia coli [T	92.94
d2rbka1	260	Sugar-phosphate phosphatase BT4131 {Bacteroides th	91.46
d1xvia_	232	Putative mannosyl-3-phosphoglycerate phosphatase M	91.45
d1s2oa1	244	Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc	90.1
d1nf2a_	267	Hypothetical protein TM0651 {Thermotoga maritima [	89.67
d2b30a1	283	PFL1270w orthologue {Plasmodium vivax [TaxId: 5855	88.96
d1y8aa1	308	Hypothetical protein AF1437 {Archaeon Archaeoglobu	86.63
d1wzca1	243	Putative mannosyl-3-phosphoglycerate phosphatase M	84.62
d2obba1	122	Hypothetical protein BT0820 {Bacteroides thetaiota	83.5

>d1nb9a_ b.43.5.1 (A:) Riboflavin kinase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Reductase/isomerase/elongation factor common domain
superfamily: Riboflavin kinase-like
family: ATP-dependent riboflavin kinase-like
domain: Riboflavin kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4e-50  Score=329.50  Aligned_cols=143  Identities=48%  Similarity=0.953  Sum_probs=131.7

Q ss_pred             ceeEeeeeeeccCCCccccCccccccCCCCccccCC-CCCCeEEEEEEEEccCeEEEEEEEeCCCCcccCCceeEeEeec
Q 017995          215 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLS-EHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLL  293 (362)
Q Consensus       215 p~~i~g~v~~G~~~g~~~lg~pTaNi~~~~~~~~lp-~~~~GvY~~~~~~~~~~~~~~~~~iG~~pt~~~~~~~~E~~~~  293 (362)
                      ||+++|+|+||+++|+++||||||||.++.. .++| .+..|||++++.+.++++|+||+|||.||||++...++|+|+|
T Consensus         4 Py~i~G~Vv~G~~~G~r~LGfPTANl~~~~~-~~lp~~~~~GVY~~~v~i~~~~~y~gi~niG~rPTf~~~~~~~E~h~l   82 (147)
T d1nb9a_           4 PYFCRGQVVRGFGRGSKQLGIPTANFPEQVV-DNLPADISTGIYYGWASVGSGDVHKMVVSIGWNPYYKNTKKSMETHIM   82 (147)
T ss_dssp             SEEEEEECBCCSSSCGGGGTCCCEECCHHHH-HTSCTTSCSEEEEEEEEETTCCCEEEEEEEEECTTSSSCCEEEEEEES
T ss_pred             CEEEEEEEEeCCccCCCccCcCCcCCcCchh-hccccccccCceEEEEEecCCCccceEEEeccccccccccceEEEEEe
Confidence            9999999999999994369999999987664 4554 2458999999999667899999999999999887789999999


Q ss_pred             cCCCcccCCCeEEEEEeeecCCCCCCCCHHHHHHHHHHHHHHHHHHcCCccccCccCCCCccccc
Q 017995          294 HEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYLKITS  358 (362)
Q Consensus       294 ~~f~~~~yg~~~~v~~~~~iR~e~~f~~~~~L~~qi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~  358 (362)
                      +||++||||++|+|+|++|||+|+||+|+|+|++||++|++.||++|+.+.+.++++|+||++|+
T Consensus        83 ~dF~~dlYG~~i~V~~~~~iR~e~KF~s~~~L~~qI~~Di~~ar~~l~~~~~~~~~~~~~~~~~~  147 (147)
T d1nb9a_          83 HTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDIEEAKKRLELPEYLKIKEDNFFQVSK  147 (147)
T ss_dssp             SCCSSCCTTSEEEEEEEEEEECCCCCSSHHHHHHHHHHHHHHHHHHTTSHHHHGGGGCHHHHTTC
T ss_pred             ccCCCceeeeEEEEEEEeEecCCcCcCCHHHHHHHHHHHHHHHHHHHCChhhhhhccCchhccCC
Confidence            66999999999999999999999999999999999999999999999999999999999999885

>d1n08a_ b.43.5.1 (A:) Riboflavin kinase {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: All beta proteins
fold: Reductase/isomerase/elongation factor common domain
superfamily: Riboflavin kinase-like
family: ATP-dependent riboflavin kinase-like
domain: Riboflavin kinase
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=1.8e-48  Score=322.08  Aligned_cols=140  Identities=47%  Similarity=0.898  Sum_probs=126.8

Q ss_pred             CceeEeeeeeeccCCCccccCccccccCCCCccccCCCCCCeEEEEEEEEccCeEEEEEEEeCCCCcccCCceeEeEeec
Q 017995          214 EPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLL  293 (362)
Q Consensus       214 rp~~i~g~v~~G~~~g~~~lg~pTaNi~~~~~~~~lp~~~~GvY~~~~~~~~~~~~~~~~~iG~~pt~~~~~~~~E~~~~  293 (362)
                      .||+++|+|+||+++|+|+||||||||.++....++..|+.|||++|+.++ +++|+||+|||.||||+++++++|||||
T Consensus        14 yPy~i~G~Vv~G~~~G~R~LGfPTANl~~~~~~~l~~~P~~GVYa~~v~i~-~~~y~~v~niG~rPTf~~~~~~~Evhil   92 (154)
T d1n08a_          14 YPIRFEGKVVHGFGRGSKELGIPTANISEDAIQELLRYRDSGVYFGYAMVQ-KRVFPMVMSVGWNPYYKNKLRSAEVHLI   92 (154)
T ss_dssp             CCEEEEEEEECCSSSCGGGGTCCCEEECGGGTTTTTTTSCSEEEEEEEEET-TEEEEEEEEEEECTTCSSCCEEEEEEET
T ss_pred             CCEEEEEEEEeCCccCCcccCcCCeeecCccccccccccccceEEEEEeee-ceeEEEEEeeccchhcccccceEEEEEe
Confidence            457999999999999933699999999987643443223589999999995 5899999999999999887889999999


Q ss_pred             cCCCc-ccCCCeEEEEEeeecCCCCCCCCHHHHHHHHHHHHHHHHHHcCCccccCccCCCCcc
Q 017995          294 HEFDE-DFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYLK  355 (362)
Q Consensus       294 ~~f~~-~~yg~~~~v~~~~~iR~e~~f~~~~~L~~qi~~d~~~~~~~~~~~~~~~~~~~~~~~  355 (362)
                      | |++ ||||++|+|+|++|||+|+||+|+|+|++||++|++.||++|+++.|..|++|+||+
T Consensus        93 d-f~~~dlYg~~i~V~~~~~iR~e~kF~s~e~L~~qI~~D~~~ar~~L~~~~~~~~~~~~~~~  154 (154)
T d1n08a_          93 E-RQGEDFYEEIMRVIVLGYIRPELNYAGLDKLIEDIHTDIRVALNSMDRPSYSSYKKDPFFK  154 (154)
T ss_dssp             T-CCSCCCTTCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHTSHHHHGGGGCGGGC
T ss_pred             c-ccchhhcCEEEEEEEeeeccCCcccCCHHHHHHHHHHHHHHHHHHHcChhHHhhccCcccC
Confidence            8 986 999999999999999999999999999999999999999999999999999999995

>d1mrza1 b.43.5.1 (A:159-288) Riboflavin kinase domain of bifunctional FAD synthetase {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: Reductase/isomerase/elongation factor common domain
superfamily: Riboflavin kinase-like
family: ATP-dependent riboflavin kinase-like
domain: Riboflavin kinase domain of bifunctional FAD synthetase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.3e-44  Score=292.24  Aligned_cols=124  Identities=31%  Similarity=0.465  Sum_probs=94.6

Q ss_pred             eeEeeeeeeccCCCccccCccccccCCCCccccCCCCCCeEEEEEEEEccCeEEEEEEEeCCCCcccC-CceeEeEeecc
Q 017995          216 WYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDN-AEKTIEPWLLH  294 (362)
Q Consensus       216 ~~i~g~v~~G~~~g~~~lg~pTaNi~~~~~~~~lp~~~~GvY~~~~~~~~~~~~~~~~~iG~~pt~~~-~~~~~E~~~~~  294 (362)
                      |+++|+|+||+++|| +||||||||.+++. .++| |+.|||++|+.+.++++|+|++|||+||||++ ...++|+||+|
T Consensus         2 y~i~G~V~~G~~~Gr-~lGfPTANl~~~~~-~~~~-p~~GVY~~~v~~~~~~~~~~v~~iG~~PTf~~~~~~~~E~hi~d   78 (130)
T d1mrza1           2 FEIEGIVHKDREFGR-KLGFPTANIDRGNE-KLVD-LKRGVYLVRVHLPDGKKKFGVMNVGFRPTVGDARNVKYEVYILD   78 (130)
T ss_dssp             CEEEEEC------------CCCEECBCCSS-CBCC-CCSEEEEEEEECGGGCEEEEEEEEEEC------CCEEEEEEETT
T ss_pred             EEEEEEEEeCCcccc-ccCCCCCCcccccc-cccc-cccceeEEEEEEeeccccceEEEEEeecccccccceeEEEEEcc
Confidence            789999999999998 59999999998775 4554 25899999998866689999999999999975 56789999998


Q ss_pred             CCCcccCCCeEEEEEeeecCCCCCCCCHHHHHHHHHHHHHHHHHHcCCc
Q 017995          295 EFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLP  343 (362)
Q Consensus       295 ~f~~~~yg~~~~v~~~~~iR~e~~f~~~~~L~~qi~~d~~~~~~~~~~~  343 (362)
                       |++|+||++++|+|++|||+|+||+|+++|++||++|++.||++|++.
T Consensus        79 -f~~dlYg~~i~v~f~~~lR~e~kF~s~~eL~~qI~~Di~~ar~~l~~~  126 (130)
T d1mrza1          79 -FEGDLYGQRLKLEVLKFMRDEKKFDSIEELKAAIDQDVKSARNMIDDI  126 (130)
T ss_dssp             -CCSCCTTCEEEEEEEEEEECCCC----CCHHHHHHHHHHHHHHHHHHH
T ss_pred             -cCcccCCCEEEEEEEEEeCCCcCcCCHHHHHHHHHHHHHHHHHHHHHh
Confidence             999999999999999999999999999999999999999999999753

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=3.7e-25  Score=194.23  Aligned_cols=192  Identities=22%  Similarity=0.347  Sum_probs=160.3

Q ss_pred             CHHHHHHHHHHHHHHcCCCCCHH-HHHhhcCCCHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHhhh-cCCCCCchHHHH
Q 017995            2 TDGMFSEVLKTFLVKYGKEWDGR-EKHKIVGKTPLEEAAIIVEDYGLP-CAKHEFVNEVYSMFSDHL-CKVKALPGANRL   78 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~pgv~~~   78 (362)
                      |++++.++++++++++|++++.+ .+..+.|......+.......... ...+++.....+.+.... ...+++||+.++
T Consensus        17 t~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~   96 (218)
T d1te2a_          17 SEPLWDRAELDVMASLGVDISRRNELPDTLGLRIDMVVDLWYARQPWNGPSRQEVVERVIARAISLVEETRPLLPGVREA   96 (218)
T ss_dssp             CHHHHHHHHHHHHHHTTCCGGGGGGSCCCTTCCHHHHHHHHHHHSCCSSSCHHHHHHHHHHHHHHHHHHHCCBCTTHHHH
T ss_pred             CHHHHHHHHHHHHHHcCCCCCHHHHHHHHhCCCccchhhhhhhcccccchhHHHHHHHHHHHHHHhhhccccccchHHHH
Confidence            57889999999999999988754 567788888888877766665443 234455555555554444 457789999999


Q ss_pred             HHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHH
Q 017995           79 IKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVV  158 (362)
Q Consensus        79 L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~  158 (362)
                      |+.|+++|++++|+||++...++..+ +.+|+.++|+.++++++++.+||+|++|..+++++|++|++|+||||+..|+.
T Consensus        97 l~~L~~~g~~~~i~T~~~~~~~~~~l-~~~~l~~~F~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~igD~~~di~  175 (218)
T d1te2a_          97 VALCKEQGLLVGLASASPLHMLEKVL-TMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMI  175 (218)
T ss_dssp             HHHHHHTTCEEEEEESSCHHHHHHHH-HHTTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSCGGGEEEEESSHHHHH
T ss_pred             HHHhhhcccccccccccccccccccc-ccccccccccccccccccccchhhHHHHHHHHHHcCCCchhcEEEeeCHHHHH
Confidence            99999999999999999999999888 89999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCEEEEEcCCCCcc-ccccchhHhhccccccc
Q 017995          159 AGKAAGMEVVAVPSLPKQT-HRYTAADEVINSLLDLR  194 (362)
Q Consensus       159 aA~~aG~~~i~v~~~~~~~-~~~ssa~~vi~~l~el~  194 (362)
                      +|+++|+.+|+|....... .....++.+++++.++.
T Consensus       176 aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i~~l~el~  212 (218)
T d1te2a_         176 ASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELT  212 (218)
T ss_dssp             HHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGCC
T ss_pred             HHHHcCCEEEEECCCCCccchhhcCCCEEECChhhCC
Confidence            9999999999997743322 23456788888888864

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

Probab=99.92  E-value=1.1e-24  Score=190.02  Aligned_cols=186  Identities=18%  Similarity=0.315  Sum_probs=158.0

Q ss_pred             CHHHHHHHHHHHHHHcCCCCCHHHHHhhcCCCHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHhhhcCCCCCchHHHHHH
Q 017995            2 TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLP-CAKHEFVNEVYSMFSDHLCKVKALPGANRLIK   80 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~pgv~~~L~   80 (362)
                      |++.+.++|+++++++|.+.+.++..+.++....+.+..    .+.. ...+++...+.+.+.+...+++++||+.++|+
T Consensus        17 s~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~   92 (207)
T d2hdoa1          17 SQPAYTTVMREVLATYGKPFSPAQAQKTFPMAAEQAMTE----LGIAASEFDHFQAQYEDVMASHYDQIELYPGITSLFE   92 (207)
T ss_dssp             CHHHHHHHHHHHHHTTTCCCCHHHHHHHTTSCHHHHHHH----TTCCGGGHHHHHHHHHHHHTTCGGGCEECTTHHHHHH
T ss_pred             CHHHHHHHHHHHHHHcCCCCCHHHHHHHhcchhhhhhhc----cccchhhHHHHHHHhhhhhcccccccccccchhhhhh
Confidence            578899999999999999999999888888877655433    3332 33466777777777777788999999999999


Q ss_pred             HHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHH
Q 017995           81 HLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAG  160 (362)
Q Consensus        81 ~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA  160 (362)
                      .|++ +++++|+||++...++..+ +++|+.++|+.++++++.+.+||+|++|..+++++|++|++|+||||+.+|+++|
T Consensus        93 ~l~~-~~~~~ivT~~~~~~~~~~l-~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~VgDs~~Di~~a  170 (207)
T d2hdoa1          93 QLPS-ELRLGIVTSQRRNELESGM-RSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTA  170 (207)
T ss_dssp             HSCT-TSEEEEECSSCHHHHHHHH-TTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHH
T ss_pred             hhcc-ccccccccccccccccccc-ccccccccccccccccccccchhhhhhhcccccceeeeccceeEecCCHHHHHHH
Confidence            9986 6999999999999999999 9999999999999999999999999999999999999999999999999999999


Q ss_pred             HHcCCEEEEEcCCCCccccccchhHhhcccccc
Q 017995          161 KAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL  193 (362)
Q Consensus       161 ~~aG~~~i~v~~~~~~~~~~ssa~~vi~~l~el  193 (362)
                      +++||.++++.++.........++.++.++.++
T Consensus       171 ~~aG~~~i~v~~g~~~~~~~~~~~~~i~~l~dl  203 (207)
T d2hdoa1         171 QAANVDFGLAVWGMDPNADHQKVAHRFQKPLDI  203 (207)
T ss_dssp             HHHTCEEEEEGGGCCTTGGGSCCSEEESSGGGG
T ss_pred             HHcCCeEEEEecCCCChhHhhhcCcEeCCHHHH
Confidence            999999999987554443333456666666654

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.90  E-value=3.1e-23  Score=180.19  Aligned_cols=169  Identities=13%  Similarity=0.176  Sum_probs=144.0

Q ss_pred             CHHHHHHHHHHHHHHcCCCCCHHHHH-hhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhcCCCCCchHHHHHH
Q 017995            2 TDGMFSEVLKTFLVKYGKEWDGREKH-KIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIK   80 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~~~L~   80 (362)
                      |...+..+|+++++++|++.+.++.. .+.+......+..+....+..  .+.+.......+.+......++||+.++|+
T Consensus        15 s~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~pgv~~~L~   92 (204)
T d2go7a1          15 SYEAILSGIEETFAQFSIPYDKEKVREFIFKYSVQDLLVRVAEDRNLD--VEVLNQVRAQSLAEKNAQVVLMPGAREVLA   92 (204)
T ss_dssp             CHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHSCHHHHHHHHHHHHTCC--HHHHHHHHHHHHTTCGGGCEECTTHHHHHH
T ss_pred             CHHHHHHHHHHHHHHcCCCCCHHHHHHhhcccccccccccccchhhhh--HHHHHHHHHHHHHhhcccCcccchHHhhhh
Confidence            56788899999999999998776654 556778888888887766553  444444444455555567899999999999


Q ss_pred             HHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHH
Q 017995           81 HLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAG  160 (362)
Q Consensus        81 ~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA  160 (362)
                      .|+++|++++|+||++.. +...| +++|+.++|+.|+++++...+||+|++|..++++++++|++|+||||+..|+++|
T Consensus        93 ~L~~~g~~~~v~Sn~~~~-~~~~l-~~~gl~~~f~~i~~s~~~~~~Kp~~~~~~~~~~~~~~~p~~~l~VgD~~~Di~~A  170 (204)
T d2go7a1          93 WADESGIQQFIYTHKGNN-AFTIL-KDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFA  170 (204)
T ss_dssp             HHHHTTCEEEEECSSCTH-HHHHH-HHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHH
T ss_pred             cccccccchhhhcccchh-hhhhh-hhcccccccccccccccccccchhHHHHHHHHHHhCCCCceEEEEeCCHHHHHHH
Confidence            999999999999998875 45677 8899999999999999999999999999999999999999999999999999999


Q ss_pred             HHcCCEEEEEcCCC
Q 017995          161 KAAGMEVVAVPSLP  174 (362)
Q Consensus       161 ~~aG~~~i~v~~~~  174 (362)
                      +++||+++++.++.
T Consensus       171 ~~~G~~~i~v~~~~  184 (204)
T d2go7a1         171 QNSGIQSINFLEST  184 (204)
T ss_dssp             HHHTCEEEESSCCS
T ss_pred             HHcCCeEEEEcCCC
Confidence            99999999997753

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

Probab=99.88  E-value=8.1e-23  Score=183.84  Aligned_cols=168  Identities=19%  Similarity=0.243  Sum_probs=139.8

Q ss_pred             HHHHHHHHHHHcCCCCCHHHHHhhcCCCHHHHHHHHHH----------HhCCCCCH---HHHHHHHHHHHHhhh-cCCCC
Q 017995            6 FSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVE----------DYGLPCAK---HEFVNEVYSMFSDHL-CKVKA   71 (362)
Q Consensus         6 ~~~a~~~~l~~~g~~~~~~~~~~~~g~~~~~~~~~~~~----------~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~   71 (362)
                      ...++.++++++|++++.++++..+|....+..+.+..          .++.....   +.+...+.+.+.... ....+
T Consensus        21 ~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  100 (257)
T d1swva_          21 PLEVFMEIFHKRGVAITAEEARKPMGLLKIDHVRALTEMPRIASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASP  100 (257)
T ss_dssp             THHHHHHHHHTTTCCCCHHHHHTTTTSCHHHHHHHHHHSHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHGGGGCCB
T ss_pred             HHHHHHHHHHHcCCCCCHHHHHHHhCCcHHHHHHHHhhhhhhhHHHHHHhcccCCHHHHHHHHHHHHHHHHHHhhccCcc
Confidence            36789999999999999999988888876665544322          22332222   334455555555554 45789


Q ss_pred             CchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCC-cEEEeCCCCCCCCCCHHHHHHHHHHcCCC-CCcEEE
Q 017995           72 LPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF-SVIVGSDEVRTGKPSPDIFLEAAKRLNME-PSSSLV  149 (362)
Q Consensus        72 ~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f-~~iv~~~d~~~gKp~p~~~~~~~~~~~~~-p~~~l~  149 (362)
                      +||+.++|+.|+++|++++|+||.++..++..+ +++|+.++| |.+++++++..+||+|+.|..+++++|+. +++|+|
T Consensus       101 ~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l-~~~~l~~~f~d~~~~~d~~~~~KP~p~~~~~~~~~l~~~p~~~~v~  179 (257)
T d1swva_         101 INGVKEVIASLRERGIKIGSTTGYTREMMDIVA-KEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIK  179 (257)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHH-HHHHHTTCCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCSGGGEEE
T ss_pred             CCcHHHHHHHHHhcccceeecCCCchhhHHHHH-HHHhhcccccccccccccccccccChHHHHHHHHHhCCCCcceEEE
Confidence            999999999999999999999999999999999 888999877 78999999999999999999999999996 589999


Q ss_pred             EecCHhhHHHHHHcCCEEEEEcCCC
Q 017995          150 IEDSVIGVVAGKAAGMEVVAVPSLP  174 (362)
Q Consensus       150 igDs~~d~~aA~~aG~~~i~v~~~~  174 (362)
                      |||+..|+++|+++||.+|+|.++.
T Consensus       180 VgDs~~Di~aA~~aG~~ti~v~~G~  204 (257)
T d1swva_         180 VGDTVSDMKEGRNAGMWTVGVILGS  204 (257)
T ss_dssp             EESSHHHHHHHHHTTSEEEEECTTC
T ss_pred             EeCChhhHHHHHHCCCEEEEEccCC
Confidence            9999999999999999999998864

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

Probab=99.87  E-value=5.1e-21  Score=167.50  Aligned_cols=191  Identities=15%  Similarity=0.186  Sum_probs=151.2

Q ss_pred             CHHHHHHHHHHHHHHcCCCC-CHHHHHhhcCCCHHHHHHHHHHH----hCCCCCHHHHH---HHHHHHHHh-hhcCCCCC
Q 017995            2 TDGMFSEVLKTFLVKYGKEW-DGREKHKIVGKTPLEEAAIIVED----YGLPCAKHEFV---NEVYSMFSD-HLCKVKAL   72 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~~-~~~~~~~~~g~~~~~~~~~~~~~----~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~   72 (362)
                      |++.+.++++++++++|.+. +.+.+..+.+.............    .......+...   ......+.. ......++
T Consensus        18 s~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   97 (224)
T d2hsza1          18 SLPDLALSINSALKDVNLPQASENLVMTWIGNGADVLSQRAVDWACKQAEKELTEDEFKYFKRQFGFYYGENLCNISRLY   97 (224)
T ss_dssp             CHHHHHHHHHHHHHHTTCCCCCHHHHHHHCSSCHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHTTSSCEEC
T ss_pred             CHHHHHHHHHHHHHHCCCCCCcHHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhccccchH
Confidence            56788999999999999865 56667788887766554444322    22233322221   111112222 22578899


Q ss_pred             chHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEec
Q 017995           73 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIED  152 (362)
Q Consensus        73 pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igD  152 (362)
                      ||+.++|+.|+++|++++++||++...++..+ +.+||.++|+.++++++.+..||+|+.|..++++++++|++|+||||
T Consensus        98 ~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l-~~~gl~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~~~igD  176 (224)
T d2hsza1          98 PNVKETLEALKAQGYILAVVTNKPTKHVQPIL-TAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILFVGD  176 (224)
T ss_dssp             TTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHTTCGGGCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEEEES
T ss_pred             HHHHHHHHHHhccCCcccccccccHHHHHHHH-HhcCchhhccccccccccccccccchhhHHHHHHhhhhhhccchhcC
Confidence            99999999999999999999999999999999 89999999999999999999999999999999999999999999999


Q ss_pred             CHhhHHHHHHcCCEEEEEcCCCCcccc--ccchhHhhcccccc
Q 017995          153 SVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDL  193 (362)
Q Consensus       153 s~~d~~aA~~aG~~~i~v~~~~~~~~~--~ssa~~vi~~l~el  193 (362)
                      +..|+++|+++|+.+|+|.++......  ...++.++.++.++
T Consensus       177 ~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~~l~dL  219 (224)
T d2hsza1         177 SQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADI  219 (224)
T ss_dssp             SHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGG
T ss_pred             cHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEECCHHHH
Confidence            999999999999999999886543322  33467888888875

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.87  E-value=1.6e-21  Score=167.42  Aligned_cols=161  Identities=20%  Similarity=0.232  Sum_probs=137.3

Q ss_pred             CHHHHHHHHHHHHHHcCCCCCHHHHHhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhcCCCCCchHHHHHHH
Q 017995            2 TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKH   81 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~~~L~~   81 (362)
                      |...+..+|+++++.+|++.+.+...+.++......++.+.    .  ..+.+.+.+.+.+........++||+.++|+.
T Consensus        17 t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~gv~~~l~~   90 (187)
T d2fi1a1          17 NYETSTAAFVETLALYGITQDHDSVYQALKVSTPFAIETFA----P--NLENFLEKYKENEARELEHPILFEGVSDLLED   90 (187)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHCHHHHHHHHC----T--TCTTHHHHHHHHHHHHTTSCCBCTTHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHcCCCccHHHHHhhhhccchhhhhhhh----H--HHHHHHHHHHHHHHHHhhcCcccchhHHHHHH
Confidence            45678899999999999999888888888877766554442    2  12345566666666666788999999999999


Q ss_pred             HHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHH
Q 017995           82 LSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGK  161 (362)
Q Consensus        82 L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~  161 (362)
                      |+++|++++|+||+++...+ .+ +++++.++|+.+++++++...||+|+.|..+++++++  ++|+||||+..|+++|+
T Consensus        91 l~~~g~~~~i~Sn~~~~~~~-~l-~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~--~~~l~vgDs~~Di~aA~  166 (187)
T d2fi1a1          91 ISNQGGRHFLVSHRNDQVLE-IL-EKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQI--SSGLVIGDRPIDIEAGQ  166 (187)
T ss_dssp             HHHTTCEEEEECSSCTHHHH-HH-HHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTC--SSEEEEESSHHHHHHHH
T ss_pred             HHhhhccccccccCccchhh-hh-hhhccccccccccccccccccCCCHHHHHHHHHHcCC--CCeEEEeCCHHHHHHHH
Confidence            99999999999999887654 67 8899999999999999999999999999999999986  45999999999999999


Q ss_pred             HcCCEEEEEcC
Q 017995          162 AAGMEVVAVPS  172 (362)
Q Consensus       162 ~aG~~~i~v~~  172 (362)
                      ++|++++++..
T Consensus       167 ~aG~~~i~v~~  177 (187)
T d2fi1a1         167 AAGLDTHLFTS  177 (187)
T ss_dssp             HTTCEEEECSC
T ss_pred             HcCCEEEEECC
Confidence            99999999875

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

Probab=99.86  E-value=3.5e-21  Score=168.84  Aligned_cols=169  Identities=24%  Similarity=0.322  Sum_probs=142.1

Q ss_pred             CHHHHHHHHHHHHHHcCCCCCHHH-HHhhcCCCHHHHHHHHHHHhCCCCCHHHH---HHHHHHHHHhhh---cCCCCCch
Q 017995            2 TDGMFSEVLKTFLVKYGKEWDGRE-KHKIVGKTPLEEAAIIVEDYGLPCAKHEF---VNEVYSMFSDHL---CKVKALPG   74 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~---~~~~~~pg   74 (362)
                      |+..+.++++++++.+|++...++ ...+.+.+....++.+....+...+.+.+   ...+.+.+....   ...+++||
T Consensus        16 s~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g   95 (221)
T d1o08a_          16 TAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLADKKVSAEEFKELAKRKNDNYVKMIQDVSPADVYPG   95 (221)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCHHHHTTTTTCCHHHHHHHHHTTSSSCCCHHHHHHHHHHHHHHHHHHTTTCCGGGBCTT
T ss_pred             CHHHHHHHHHHHHHHcCCCCChHHHHHHHhhccchhhhhhccccccccchhhhhhhHHHHHHhhccccccccccccccCC
Confidence            467889999999999999876554 46677888888888887776666655443   344444554443   24679999


Q ss_pred             HHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCH
Q 017995           75 ANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV  154 (362)
Q Consensus        75 v~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~  154 (362)
                      +.++|+.|++.|++++++|++..  ....+ +.+++.++|+.++++++.+.+||+|++|..+++++|++|++||||||+.
T Consensus        96 ~~~~l~~l~~~~~~i~i~s~~~~--~~~~l-~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~l~~~~i~~~~~l~VgD~~  172 (221)
T d1o08a_          96 ILQLLKDLRSNKIKIALASASKN--GPFLL-ERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQ  172 (221)
T ss_dssp             HHHHHHHHHHTTCEEEECCSCTT--HHHHH-HHTTCGGGCSEECCTTTSSSCTTSTHHHHHHHHHTTCCGGGEEEEESSH
T ss_pred             ceeccccccccccceEEEeecch--hhHHH-HhhccccccccccccccccccccChHHHHHHHHHcCCCCceEEEEecCH
Confidence            99999999999999999999754  45667 8889999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHcCCEEEEEcCC
Q 017995          155 IGVVAGKAAGMEVVAVPSL  173 (362)
Q Consensus       155 ~d~~aA~~aG~~~i~v~~~  173 (362)
                      .|+++|+++||++|+|.+.
T Consensus       173 ~di~~A~~aG~~~i~v~~~  191 (221)
T d1o08a_         173 AGIQAIKDSGALPIGVGRP  191 (221)
T ss_dssp             HHHHHHHHHTCEEEEESCH
T ss_pred             HHHHHHHHcCCEEEEECCh
Confidence            9999999999999999873

>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein Atu0790
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.85  E-value=4.4e-21  Score=168.26  Aligned_cols=187  Identities=24%  Similarity=0.373  Sum_probs=152.9

Q ss_pred             CHHHHHHHHHHHHHHcCCCCCHHHH-HhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhh-cCCCCCchHHHHH
Q 017995            2 TDGMFSEVLKTFLVKYGKEWDGREK-HKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHL-CKVKALPGANRLI   79 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~pgv~~~L   79 (362)
                      |+.++.++|+++++++|++++.++. ..+.|.+..+....+....+.+... ++...+...+.... ....++||+.++|
T Consensus        16 t~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~L   94 (222)
T d2fdra1          16 SEIIAAQVESRLLTEAGYPISVEEMGERFAGMTWKNILLQVESEASIPLSA-SLLDKSEKLLDMRLERDVKIIDGVKFAL   94 (222)
T ss_dssp             CHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCCHHHHHHHHHHHHCCCCCT-HHHHHHHHHHHHHHHHHCCBCTTHHHHH
T ss_pred             CHHHHHHHHHHHHHHcCCCCCHHHHHHHHhhhccccccccccccccccccc-cchhHHHHHHHHHhhhccchhhhHHHHh
Confidence            6788999999999999999987766 6788999999999999998887664 44555555555444 5689999999999


Q ss_pred             HHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEe-CCC--CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhh
Q 017995           80 KHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVG-SDE--VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG  156 (362)
Q Consensus        80 ~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~-~~d--~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d  156 (362)
                      +.|+.   +.+++|++....++..+ +++++.++|+.+++ +++  ....||+|+.|..+++++|++|++|+||||+..|
T Consensus        95 ~~l~~---~~~i~t~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~~~~KP~~~~~~~~~~~l~~~p~~~l~vgDs~~d  170 (222)
T d2fdra1          95 SRLTT---PRCICSNSSSHRLDMML-TKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHG  170 (222)
T ss_dssp             HHCCS---CEEEEESSCHHHHHHHH-HHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHH
T ss_pred             hhccc---cceeeeecchhhhhhhh-cccccccccceeecccccccccccccCHHHHHHHHHhhCCCCceEEEEcCCHHH
Confidence            98864   56899999999999888 89999999997554 443  4567999999999999999999999999999999


Q ss_pred             HHHHHHcCCEEEEEcCCCCccc----c--ccchhHhhcccccc
Q 017995          157 VVAGKAAGMEVVAVPSLPKQTH----R--YTAADEVINSLLDL  193 (362)
Q Consensus       157 ~~aA~~aG~~~i~v~~~~~~~~----~--~ssa~~vi~~l~el  193 (362)
                      +++|+++||.+|++.++.....    .  ...++.+++++.++
T Consensus       171 v~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi~~l~eL  213 (222)
T d2fdra1         171 IHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDL  213 (222)
T ss_dssp             HHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGH
T ss_pred             HHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEECCHHHH
Confidence            9999999999999988643221    1  12367778888775

>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: predicted phosphatase SP0104
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.84  E-value=1.3e-20  Score=163.82  Aligned_cols=184  Identities=14%  Similarity=0.191  Sum_probs=147.9

Q ss_pred             CHHHHHHHHHHHHHHcCCCC-CHHHHHhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhh-cCCCCCchHHHHH
Q 017995            2 TDGMFSEVLKTFLVKYGKEW-DGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHL-CKVKALPGANRLI   79 (362)
Q Consensus         2 Se~~~~~a~~~~l~~~g~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~pgv~~~L   79 (362)
                      |...+..+++++++++|++. +.+.++.+.|......+......    ...++....+...+.... ...+++||+.++|
T Consensus        18 s~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   93 (210)
T d2ah5a1          18 SSIGIHNAFTYTFKELGVPSPDAKTIRGFMGPPLESSFATCLSK----DQISEAVQIYRSYYKAKGIYEAQLFPQIIDLL   93 (210)
T ss_dssp             CHHHHHHHHHHHHHHHTCCCCCHHHHHHTSSSCHHHHHHTTSCG----GGHHHHHHHHHHHHHHTGGGSCEECTTHHHHH
T ss_pred             CHHHHHHHHHHHHHHCCCCCCCHHHHHHhhhcchhhhccccccc----hhhHHHHHHHHHHHHhhhhhcccchhHHHHHH
Confidence            56778999999999999864 57778888888877765443221    123444444555444433 5789999999999


Q ss_pred             HHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHH
Q 017995           80 KHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA  159 (362)
Q Consensus        80 ~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~a  159 (362)
                      +.|+.+ ++++++||++...++..+ +++|+..+|+.++++++.  +||+|+.+..+++++|++|++|+||||+.+|+.+
T Consensus        94 ~~l~~~-~~~~i~t~~~~~~~~~~l-~~~gl~~~fd~v~~~~~~--~~~~p~~~~~~~~~~~~~~~~~v~VGDs~~Di~a  169 (210)
T d2ah5a1          94 EELSSS-YPLYITTTKDTSTAQDMA-KNLEIHHFFDGIYGSSPE--APHKADVIHQALQTHQLAPEQAIIIGDTKFDMLG  169 (210)
T ss_dssp             HHHHTT-SCEEEEEEEEHHHHHHHH-HHTTCGGGCSEEEEECSS--CCSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHH
T ss_pred             hhhhcc-cchhhcccccchhhhHHH-Hhhccccccccccccccc--ccccccccchhhhhhhcccccceeecCCHHHHHH
Confidence            999977 599999999999999988 899999999999999886  5888899999999999999999999999999999


Q ss_pred             HHHcCCEEEEEcCCCCccccc--cchhHhhcccccc
Q 017995          160 GKAAGMEVVAVPSLPKQTHRY--TAADEVINSLLDL  193 (362)
Q Consensus       160 A~~aG~~~i~v~~~~~~~~~~--ssa~~vi~~l~el  193 (362)
                      |+++|+++++|.++....+..  ..++.+++++.|+
T Consensus       170 a~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~~l~el  205 (210)
T d2ah5a1         170 ARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEV  205 (210)
T ss_dssp             HHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHH
T ss_pred             HHHcCCeEEEEcCCCCCHHHHHhCCCCEEECCHHHH
Confidence            999999999998764433322  2467777777764

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.84  E-value=6.2e-21  Score=168.29  Aligned_cols=190  Identities=20%  Similarity=0.271  Sum_probs=141.5

Q ss_pred             HHHHHHHHHHHHHHc-CCCCCHHHHHhhcCCCHHHHHHHHHHHhCCCCCH-----HHHHHHHHHHHHhhh--cCCCCCch
Q 017995            3 DGMFSEVLKTFLVKY-GKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAK-----HEFVNEVYSMFSDHL--CKVKALPG   74 (362)
Q Consensus         3 e~~~~~a~~~~l~~~-g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~--~~~~~~pg   74 (362)
                      +..+.+++.+++.++ |.+..... ..+.+.........+....+.+...     +...+.+...+....  ...+++||
T Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g   95 (228)
T d2hcfa1          17 ESMNRRVLADALIEVYGTEGSTGS-HDFSGKMDGAIIYEVLSNVGLERAEIADKFDKAKETYIALFRERARREDITLLEG   95 (228)
T ss_dssp             CTHHHHHHHHHHHHHHSCCCCC----CCTTCCHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCCGGGEEECTT
T ss_pred             HHHHHHHHHHHHHHHcCCCccHHH-HHHhcCchHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHhhccCceecCc
Confidence            456788888887764 54443222 2344556666666666665544221     112222333333333  35689999


Q ss_pred             HHHHHHHHHHCC-CcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHc---CCCCCcEEEE
Q 017995           75 ANRLIKHLSCHG-VPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL---NMEPSSSLVI  150 (362)
Q Consensus        75 v~~~L~~L~~~g-~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~---~~~p~~~l~i  150 (362)
                      +.++|+.|+++| ++++|+||++...++..+ +.+||.++|+.++++++....||.|+.+...+..+   +++|++||||
T Consensus        96 ~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l-~~~gl~~~fd~i~~~~~~~~~k~~p~~~~~~~~~~~~~~~~p~~~l~V  174 (228)
T d2hcfa1          96 VRELLDALSSRSDVLLGLLTGNFEASGRHKL-KLPGIDHYFPFGAFADDALDRNELPHIALERARRMTGANYSPSQIVII  174 (228)
T ss_dssp             HHHHHHHHHTCTTEEEEEECSSCHHHHHHHH-HTTTCSTTCSCEECTTTCSSGGGHHHHHHHHHHHHHCCCCCGGGEEEE
T ss_pred             hHHHHhhhhccccccccccCCCcchhhhhhh-hhhcccccccccccccccccccchhHHHHHHhhhhcccCCChhHheee
Confidence            999999999987 899999999999999999 89999999999999999999999999988777666   7999999999


Q ss_pred             ecCHhhHHHHHHcCCEEEEEcCCCCcccc--ccchhHhhccccccc
Q 017995          151 EDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDLR  194 (362)
Q Consensus       151 gDs~~d~~aA~~aG~~~i~v~~~~~~~~~--~ssa~~vi~~l~el~  194 (362)
                      ||+.+|+++|+++||.+|+|.++....+.  ...|+.+++++.++.
T Consensus       175 GD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi~~~~el~  220 (228)
T d2hcfa1         175 GDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAETD  220 (228)
T ss_dssp             ESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESCSCCHH
T ss_pred             cCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEECCHHHHH
Confidence            99999999999999999999876543332  235678888887753

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=99.80  E-value=1.9e-19  Score=158.91  Aligned_cols=124  Identities=18%  Similarity=0.256  Sum_probs=110.6

Q ss_pred             CCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 017995           68 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS  147 (362)
Q Consensus        68 ~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~  147 (362)
                      ...++||+.++|+.|++ |++++++||++...++..+ +.+|+.++|+.++++++.+.+||+|++|..+++++|++|++|
T Consensus        98 ~~~~~p~~~~~L~~l~~-~~~i~i~Sn~~~~~~~~~l-~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~l~~~p~~~  175 (230)
T d1x42a1          98 YGELYPEVVEVLKSLKG-KYHVGMITDSDTEYLMAHL-DALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEA  175 (230)
T ss_dssp             HCCBCTTHHHHHHHHBT-TBEEEEEESSCHHHHHHHH-HHHTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGE
T ss_pred             hCcccccHHHHHHHhhc-cCceeeeeccccccchhhh-cccccccccccccccccccccchhhHHHHHHHhhhccccccc
Confidence            46899999999999975 7999999999999999888 889999999999999999999999999999999999999999


Q ss_pred             EEEecCH-hhHHHHHHcCCEEEEEcCCCCccccccchhHhhcccccc
Q 017995          148 LVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL  193 (362)
Q Consensus       148 l~igDs~-~d~~aA~~aG~~~i~v~~~~~~~~~~ssa~~vi~~l~el  193 (362)
                      +||||+. +|+++|+++|+.++++.+..........++.+++++.++
T Consensus       176 l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i~~l~el  222 (230)
T d1x42a1         176 VYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREV  222 (230)
T ss_dssp             EEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEESSTTHH
T ss_pred             ceeecCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEECCHHHH
Confidence            9999986 799999999999999987544444444567888888764

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.78  E-value=1.4e-18  Score=154.57  Aligned_cols=143  Identities=20%  Similarity=0.356  Sum_probs=114.8

Q ss_pred             CHHHHHHHHHHHHHh-hhcCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCC
Q 017995           50 AKHEFVNEVYSMFSD-HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKP  128 (362)
Q Consensus        50 ~~~~~~~~~~~~~~~-~~~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp  128 (362)
                      +...+.......+.. ......++||+.++|+.|++ |++++++||++...++..+ +.+|+.++|+.++++++++.+||
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l-~~~gl~~~fd~i~~s~~~~~~KP  165 (247)
T d2gfha1          88 DNRKLAEECYFLWKSTRLQHMILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKI-EACACQSYFDAIVIGGEQKEEKP  165 (247)
T ss_dssp             CCHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHH-HHHTCGGGCSEEEEGGGSSSCTT
T ss_pred             chHHHHHHHHHHHHHhhhccCccCccHHHHHHHhhc-ccceEEeecccchhhhhhh-hhccccccccccccccccccchh
Confidence            334444444444333 33678899999999999984 7999999999999988888 88999999999999999999999


Q ss_pred             CHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCEEE-EEcCCCC-ccccccchhHhhccccccc
Q 017995          129 SPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVV-AVPSLPK-QTHRYTAADEVINSLLDLR  194 (362)
Q Consensus       129 ~p~~~~~~~~~~~~~p~~~l~igDs~-~d~~aA~~aG~~~i-~v~~~~~-~~~~~ssa~~vi~~l~el~  194 (362)
                      +|++|..+++++|++|++|+||||+. +|+.+|+++|++++ ++..... .......++.++.++.++.
T Consensus       166 ~p~~~~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i~~l~eL~  234 (247)
T d2gfha1         166 APSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLELP  234 (247)
T ss_dssp             CHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESSGGGHH
T ss_pred             hhhhHHHHHHHhhcCHHhcceeccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEECCHHHHH
Confidence            99999999999999999999999997 89999999999855 4444222 1122334677888887754

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

Probab=99.78  E-value=7.6e-19  Score=153.26  Aligned_cols=127  Identities=16%  Similarity=0.264  Sum_probs=112.5

Q ss_pred             hcCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 017995           66 LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS  145 (362)
Q Consensus        66 ~~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~  145 (362)
                      .....++|++.++|+.|+++|++++++||+....++..+ ...++..+|+.++++++++..||+|+.|..+++++|++|+
T Consensus        89 ~~~~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~-~~~~~~~~fd~~~~s~~~~~~KP~p~~~~~~~~~~g~~p~  167 (220)
T d1zrna_          89 YLRLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVV-SHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRS  167 (220)
T ss_dssp             GGGCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-HHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGG
T ss_pred             hccccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHH-hhccccccccceeeeeeeeccccHHHHHHHHHHHhCCCCc
Confidence            346789999999999999999999999999999998888 8899999999999999999999999999999999999999


Q ss_pred             cEEEEecCHhhHHHHHHcCCEEEEEcCCCC-ccccccchhHhhcccccc
Q 017995          146 SSLVIEDSVIGVVAGKAAGMEVVAVPSLPK-QTHRYTAADEVINSLLDL  193 (362)
Q Consensus       146 ~~l~igDs~~d~~aA~~aG~~~i~v~~~~~-~~~~~ssa~~vi~~l~el  193 (362)
                      +|+||||+..|+++|+++||++++|..... ..+....++.+++++.++
T Consensus       168 e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i~~l~el  216 (220)
T d1zrna_         168 AILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAV  216 (220)
T ss_dssp             GEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESSHHHH
T ss_pred             eEEEEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEECCHHHH
Confidence            999999999999999999999999975322 222233467888888764

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=9.7e-19  Score=154.57  Aligned_cols=132  Identities=13%  Similarity=0.110  Sum_probs=108.8

Q ss_pred             HHHhhhcCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEe-CCCCCCCCCCHHHHHHHHHH
Q 017995           61 MFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVG-SDEVRTGKPSPDIFLEAAKR  139 (362)
Q Consensus        61 ~~~~~~~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~-~~d~~~gKp~p~~~~~~~~~  139 (362)
                      .+........++||+.++|+.|+++|++++|+||++...++..+ ..+++.++|+..++ .++...+||+|.+|..++++
T Consensus       118 ~~~~~~~~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~KP~p~~~~~~~~~  196 (253)
T d1zs9a1         118 AFTAGRMKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLF-GHSTEGDILELVDGHFDTKIGHKVESESYRKIADS  196 (253)
T ss_dssp             HHHTTSCCBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HTBTTBCCGGGCSEEECGGGCCTTCHHHHHHHHHH
T ss_pred             HHHhhhcccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHH-HHcCcchhhhhcceeeccccccCCCcHHHHHHHHH
Confidence            33444456889999999999999999999999999999988777 88899888885544 35567789999999999999


Q ss_pred             cCCCCCcEEEEecCHhhHHHHHHcCCEEEEEcCCCCccc--cccchhHhhcccccc
Q 017995          140 LNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH--RYTAADEVINSLLDL  193 (362)
Q Consensus       140 ~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~~~~~~~~--~~ssa~~vi~~l~el  193 (362)
                      +|++|++|+||||+..|+.+|+++||++++|........  ....++.+|++|.|+
T Consensus       197 ~~~~p~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i~sl~EL  252 (253)
T d1zs9a1         197 IGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITSFSEL  252 (253)
T ss_dssp             HTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESSGGGC
T ss_pred             hCCCcCcEEEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEECChHHh
Confidence            999999999999999999999999999999975322221  123445677777764

>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Xanthobacter autotrophicus [TaxId: 280]

Probab=99.72  E-value=3.2e-17  Score=144.98  Aligned_cols=110  Identities=22%  Similarity=0.365  Sum_probs=100.8

Q ss_pred             HHHhhhcCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHc
Q 017995           61 MFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL  140 (362)
Q Consensus        61 ~~~~~~~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~  140 (362)
                      .+...+....++|++.++|+.|+  ++.++++||++...+...+ +..++.++|+.|+++++++..||+|++|..+++++
T Consensus        84 ~l~~~~~~~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~-~~~~~~~~fd~v~~s~~~~~~KP~p~~f~~a~~~l  160 (245)
T d1qq5a_          84 DMAQAYNRLTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALV-ANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVL  160 (245)
T ss_dssp             HHHGGGGSCCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHH-HHTTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHH
T ss_pred             HHHhcccccccchhhhHHHHHHh--hhceeEEeccchHHHHHHH-hhcccccccccccccccccccCccHHHHHHHHHHh
Confidence            34444567889999999999886  5789999999999998888 88999999999999999999999999999999999


Q ss_pred             CCCCCcEEEEecCHhhHHHHHHcCCEEEEEcCC
Q 017995          141 NMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL  173 (362)
Q Consensus       141 ~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~~~  173 (362)
                      |++|++||||||+..|+.+|+++||++|+|...
T Consensus       161 g~~p~e~l~VgD~~~di~~A~~aG~~tv~v~r~  193 (245)
T d1qq5a_         161 GVTPAEVLFVSSNGFDVGGAKNFGFSVARVARL  193 (245)
T ss_dssp             CCCGGGEEEEESCHHHHHHHHHHTCEEEEECCS
T ss_pred             CCChhhEEEEeCCHHHHHHHHHcCCeEEEEcCC
Confidence            999999999999999999999999999999753

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.68  E-value=1.4e-17  Score=145.25  Aligned_cols=108  Identities=15%  Similarity=0.176  Sum_probs=96.0

Q ss_pred             hhcCCCCCchHHHHHHHHHHCCCcEEEEcCCC----hHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHc
Q 017995           65 HLCKVKALPGANRLIKHLSCHGVPMALASNSH----RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL  140 (362)
Q Consensus        65 ~~~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~----~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~  140 (362)
                      ......++||+.++|..|+++|++++++|++.    .......+ ...++.++||.++++++++.+||+|++|..+++++
T Consensus        92 ~~~~~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~-~~~~l~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~  170 (222)
T d1cr6a1          92 AMAARSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQ-MMCELSQHFDFLIESCQVGMIKPEPQIYNFLLDTL  170 (222)
T ss_dssp             HHHTCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHH-HHHHHGGGCSEEEEHHHHSCCTTCHHHHHHHHHHH
T ss_pred             HHhcCCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHH-HhcChHhhhceeeehhhccCCCCChHHHHHHHHHh
Confidence            34567899999999999999999999999853    33344444 67789999999999999999999999999999999


Q ss_pred             CCCCCcEEEEecCHhhHHHHHHcCCEEEEEcCC
Q 017995          141 NMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL  173 (362)
Q Consensus       141 ~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~~~  173 (362)
                      +++|++||||||+..|+++|+++||++|+|...
T Consensus       171 ~v~p~~~l~IgD~~~Di~~A~~aG~~ti~V~~~  203 (222)
T d1cr6a1         171 KAKPNEVVFLDDFGSNLKPARDMGMVTILVHNT  203 (222)
T ss_dssp             TSCTTSEEEEESSSTTTHHHHHHTCEEEECCSS
T ss_pred             CCCcceEEEEECCHHHHHHHHHcCCEEEEECCc
Confidence            999999999999999999999999999999663

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=3.6e-17  Score=141.89  Aligned_cols=107  Identities=18%  Similarity=0.207  Sum_probs=93.8

Q ss_pred             hcCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHH---HhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCC
Q 017995           66 LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKI---SYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM  142 (362)
Q Consensus        66 ~~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L---~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~  142 (362)
                      .....++||+.++|..|+++|++++++||.........+   ....++.++||.|+++++++.+||+|++|..+++++|+
T Consensus        95 ~~~~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~  174 (225)
T d1zd3a1          95 ISARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKA  174 (225)
T ss_dssp             HHHCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHTC
T ss_pred             hhcCCCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhccEEEeccccccchhHHHHHHHHhhhccc
Confidence            345789999999999999999999999987554322221   14557888999999999999999999999999999999


Q ss_pred             CCCcEEEEecCHhhHHHHHHcCCEEEEEcC
Q 017995          143 EPSSSLVIEDSVIGVVAGKAAGMEVVAVPS  172 (362)
Q Consensus       143 ~p~~~l~igDs~~d~~aA~~aG~~~i~v~~  172 (362)
                      +|++|+||||+..|+++|+++||++++|.+
T Consensus       175 ~p~e~l~VgD~~~Di~~A~~~G~~ti~v~~  204 (225)
T d1zd3a1         175 SPSEVVFLDDIGANLKPARDLGMVTILVQD  204 (225)
T ss_dssp             CGGGEEEEESCHHHHHHHHHTTCEEEECSS
T ss_pred             CccceeEEecCHHHHHHHHHcCCEEEEECC
Confidence            999999999999999999999999999865

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.67  E-value=1.5e-16  Score=133.30  Aligned_cols=103  Identities=13%  Similarity=0.129  Sum_probs=91.8

Q ss_pred             cCCCCCchHHHHHHHHHHCCCcEEEEcCCChHh-HHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 017995           67 CKVKALPGANRLIKHLSCHGVPMALASNSHRAT-IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS  145 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~-i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~  145 (362)
                      ..++++||+.++|+.|+++|++++|+|++++.. .+..+ +.+++..+|..+.++     .||+|+.|..+++++|++|+
T Consensus        43 ~~~~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l-~~~~~~~~~~~~~~~-----~kp~~~~~~~~~~~~~~~~~  116 (164)
T d1u7pa_          43 QNIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLL-ELFDLGKYFIQREIY-----PGSKVTHFERLHHKTGVPFS  116 (164)
T ss_dssp             CEECCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHH-HHTTCGGGCSEEEES-----SSCHHHHHHHHHHHHCCCGG
T ss_pred             cccccchHHHHHHHHHHHCCCcEEEEeccccchhhccch-hcccccccceeeecc-----cCCChHHHHHHHHHhCCChH
Confidence            357899999999999999999999999887754 44455 889999999888654     58999999999999999999


Q ss_pred             cEEEEecCHhhHHHHHHcCCEEEEEcCCCC
Q 017995          146 SSLVIEDSVIGVVAGKAAGMEVVAVPSLPK  175 (362)
Q Consensus       146 ~~l~igDs~~d~~aA~~aG~~~i~v~~~~~  175 (362)
                      +|+||||+..|+++|+++|+.+|.|.++..
T Consensus       117 ~~l~igD~~~di~aA~~aG~~~i~v~~G~~  146 (164)
T d1u7pa_         117 QMVFFDDENRNIIDVGRLGVTCIHIRDGMS  146 (164)
T ss_dssp             GEEEEESCHHHHHHHHTTTCEEEECSSCCC
T ss_pred             HEEEEcCCHHHHHHHHHcCCEEEEECCCCC
Confidence            999999999999999999999999988643

>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain
species: Escherichia coli [TaxId: 562]

Probab=99.64  E-value=4.7e-17  Score=136.02  Aligned_cols=107  Identities=16%  Similarity=0.178  Sum_probs=83.4

Q ss_pred             hcCCCCCchHHHHHHHHHHCCCcEEEEcCCC---------------hHhHHHHHHhhcCCcC---CCcEEEeCCCCCCCC
Q 017995           66 LCKVKALPGANRLIKHLSCHGVPMALASNSH---------------RATIESKISYQHGWNE---SFSVIVGSDEVRTGK  127 (362)
Q Consensus        66 ~~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~---------------~~~i~~~L~~~~gl~~---~f~~iv~~~d~~~gK  127 (362)
                      ..++.++||+.++|+.|+++|++++++||.+               ...+...+ ...|+..   +|+..+..+++.+.|
T Consensus        26 ~~~~~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l-~~~~~~~~~i~~~~~~~~~~~~~~K  104 (161)
T d2fpwa1          26 FDKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIF-TSQGVQFDEVLICPHLPADECDCRK  104 (161)
T ss_dssp             GGGCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHH-HHTTCCEEEEEEECCCGGGCCSSST
T ss_pred             HHHceECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhc-cccccccceeeeccccccccccccc
Confidence            3568999999999999999999999999975               12233344 4445532   233334456778889


Q ss_pred             CCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEEEcCC
Q 017995          128 PSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL  173 (362)
Q Consensus       128 p~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~~~  173 (362)
                      |+|+++..++++++++|++|+||||+.+|+++|+++||+++++.+.
T Consensus       105 P~p~~~~~~~~~~~id~~~~~~IGD~~~Di~aA~~aG~~~i~i~~~  150 (161)
T d2fpwa1         105 PKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRE  150 (161)
T ss_dssp             TSSGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTT
T ss_pred             cccHHHHHHHHhcCCChhcEEEECCCHHHHHHHHHcCCeEEEECCC
Confidence            9999999999999999999999999999999999999999999764

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

Probab=99.63  E-value=9.6e-17  Score=135.83  Aligned_cols=104  Identities=16%  Similarity=0.225  Sum_probs=95.6

Q ss_pred             CCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhh-cCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 017995           69 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQ-HGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS  147 (362)
Q Consensus        69 ~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~-~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~  147 (362)
                      ..+.+|+.+++..++.+|++++++||++.......+ .. .++.++|+.++++++.+.+||+|++|..+++++|++|++|
T Consensus        83 ~~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~-~~~~~l~~~fd~v~~s~~~~~~Kp~~~~~~~~~~~~~~~~~~~  161 (197)
T d2b0ca1          83 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWP-EEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDT  161 (197)
T ss_dssp             EEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCG-GGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGGE
T ss_pred             cccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHH-HHcccchhhccceeecccccccccchHHHHHHHHhcCCCCCeE
Confidence            578899999999999999999999998877766666 44 4788999999999999999999999999999999999999


Q ss_pred             EEEecCHhhHHHHHHcCCEEEEEcCC
Q 017995          148 LVIEDSVIGVVAGKAAGMEVVAVPSL  173 (362)
Q Consensus       148 l~igDs~~d~~aA~~aG~~~i~v~~~  173 (362)
                      +||||+.+|+++|+++|+++++|...
T Consensus       162 l~vgDs~~di~~A~~aG~~ti~v~~~  187 (197)
T d2b0ca1         162 VFFDDNADNIEGANQLGITSILVKDK  187 (197)
T ss_dssp             EEEESCHHHHHHHHTTTCEEEECCST
T ss_pred             EEEeCCHHHHHHHHHcCCEEEEECCC
Confidence            99999999999999999999999763

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.60  E-value=4.8e-15  Score=128.57  Aligned_cols=162  Identities=10%  Similarity=0.060  Sum_probs=108.3

Q ss_pred             HHHHHHHHHHHcCCCCCHHHH-HhhcCCCHHHHHHHHHHHhCCCCC---HHHHHHHH-HHHHHhhhcCCCCCchHHHHHH
Q 017995            6 FSEVLKTFLVKYGKEWDGREK-HKIVGKTPLEEAAIIVEDYGLPCA---KHEFVNEV-YSMFSDHLCKVKALPGANRLIK   80 (362)
Q Consensus         6 ~~~a~~~~l~~~g~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~pgv~~~L~   80 (362)
                      +.+++.+.+.+.+.....+.. ..............+.........   ...+.... ...+........+++++.+++.
T Consensus        28 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (225)
T d2g80a1          28 FTNKVPQLVQQDTRDSPVSNILSQFHIDNKEQLQAHILELVAKDVKDPILKQLQGYVWAHGYESGQIKAPVYADAIDFIK  107 (225)
T ss_dssp             HHHHHHHHHHSCCTTSHHHHHHHTTCCCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHTTSCCBCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCChHHHHHHHHhhhhhHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHhhcccccchhhHHHHHh
Confidence            456666666666655444443 444444544444433332211111   12222211 2223333345667888888776


Q ss_pred             HHHHCCCcEEEEcCCChHhHHHHH----------HhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEE
Q 017995           81 HLSCHGVPMALASNSHRATIESKI----------SYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVI  150 (362)
Q Consensus        81 ~L~~~g~~~~i~S~~~~~~i~~~L----------~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~i  150 (362)
                          .+...++.++..........          ...++|.++|+.|++++... .||+|++|..+++++|++|++|+||
T Consensus       108 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~Fd~v~~~~~~~-~KP~p~~f~~~~~~lg~~p~e~l~V  182 (225)
T d2g80a1         108 ----RKKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSG-KKTETQSYANILRDIGAKASEVLFL  182 (225)
T ss_dssp             ----HCSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHHHHC-CTTCHHHHHHHHHHHTCCGGGEEEE
T ss_pred             ----hHHhhhhhhhccchhhhhhhhhhhhhHHHHHHhcCCccccceeeeccccC-CCCChhHhHHHHHhcccCchhceee
Confidence                44677888888776544332          14568899999998886554 7999999999999999999999999


Q ss_pred             ecCHhhHHHHHHcCCEEEEEcC
Q 017995          151 EDSVIGVVAGKAAGMEVVAVPS  172 (362)
Q Consensus       151 gDs~~d~~aA~~aG~~~i~v~~  172 (362)
                      ||+..|+.+|+++||++|+|..
T Consensus       183 gD~~~Dv~~A~~aG~~ti~v~r  204 (225)
T d2g80a1         183 SDNPLELDAAAGVGIATGLASR  204 (225)
T ss_dssp             ESCHHHHHHHHTTTCEEEEECC
T ss_pred             cCCHHHHHHHHHcCCEEEEEeC
Confidence            9999999999999999999975

>d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB
species: Escherichia coli [TaxId: 562]

Probab=99.57  E-value=4.2e-15  Score=126.47  Aligned_cols=125  Identities=22%  Similarity=0.256  Sum_probs=92.5

Q ss_pred             cCCCCCchHHHHHHHHHHCCCcEEEEcCCChH---------------hHHHHHHhhcCCcCCCcEEEeC-----------
Q 017995           67 CKVKALPGANRLIKHLSCHGVPMALASNSHRA---------------TIESKISYQHGWNESFSVIVGS-----------  120 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~---------------~i~~~L~~~~gl~~~f~~iv~~-----------  120 (362)
                      ..++++||+.++|+.|+++|++++++||.+.-               ++...+ ...++. .....+|.           
T Consensus        24 ~~~~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~cp~~p~~~~~~~~  101 (182)
T d2gmwa1          24 DNFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSL-ADRDVD-LDGIYYCPHHPQGSVEEFR  101 (182)
T ss_dssp             GGCCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHH-HHTTCC-CSEEEEECCBTTCSSGGGB
T ss_pred             HHeeECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhh-hhhccc-ccceeeccccccccccccc
Confidence            46889999999999999999999999998631               122222 222331 11223332           


Q ss_pred             CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEE-EEEcCCCCcccc-ccchhHhhcccccc
Q 017995          121 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV-VAVPSLPKQTHR-YTAADEVINSLLDL  193 (362)
Q Consensus       121 ~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~-i~v~~~~~~~~~-~ssa~~vi~~l~el  193 (362)
                      .++.++||+|+++..++++++++|++|+||||+.+|+++|++||+.+ +++..+...... ...++.++.++.++
T Consensus       102 ~~~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~~l~dl  176 (182)
T d2gmwa1         102 QVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADL  176 (182)
T ss_dssp             SCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGH
T ss_pred             ccccccCCccccccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEECCHHHH
Confidence            34667899999999999999999999999999999999999999964 667765432222 23467788887774

>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Hypothetical protein Mll2559
species: Mesorhizobium loti [TaxId: 381]

Probab=99.57  E-value=2.6e-15  Score=130.62  Aligned_cols=105  Identities=21%  Similarity=0.348  Sum_probs=83.0

Q ss_pred             cCCCCCchHHHHHHHHHHCCCcEEEEcCCCh---------------HhHHHHHHhhcCCcCCCcEEEeC-----------
Q 017995           67 CKVKALPGANRLIKHLSCHGVPMALASNSHR---------------ATIESKISYQHGWNESFSVIVGS-----------  120 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~---------------~~i~~~L~~~~gl~~~f~~iv~~-----------  120 (362)
                      .+++++||+.++|+.|+++|++++|+||.+.               ..+...| ...|+  +++.+..+           
T Consensus        45 ~~~~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l-~~~g~--~~~~~~~~~~~~~~~~~~~  121 (209)
T d2o2xa1          45 AEIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELL-REEGV--FVDMVLACAYHEAGVGPLA  121 (209)
T ss_dssp             GGCCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHH-HHTTC--CCSEEEEECCCTTCCSTTC
T ss_pred             HHeEecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHh-hhccc--ccceEEEeccccccccccc
Confidence            4678999999999999999999999999541               1122223 33333  23444333           


Q ss_pred             -CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEEEcCCC
Q 017995          121 -DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP  174 (362)
Q Consensus       121 -~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~~~~  174 (362)
                       .++.+.||+|+++..+++++++++++|+||||+.+|+++|+++||.++++..+.
T Consensus       122 ~~~~~~rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~~g~  176 (209)
T d2o2xa1         122 IPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGE  176 (209)
T ss_dssp             CSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCC
T ss_pred             ccccccccccchhhhHhHHHhCCCccceEEeCCCHHHHHHHHHCCCcEEEEeCCC
Confidence             244567999999999999999999999999999999999999999999887654

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

Probab=99.49  E-value=1.4e-14  Score=137.37  Aligned_cols=125  Identities=19%  Similarity=0.274  Sum_probs=103.7

Q ss_pred             CCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcE--EEeCCC-----------CCCCCCCHHHHHH
Q 017995           69 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSV--IVGSDE-----------VRTGKPSPDIFLE  135 (362)
Q Consensus        69 ~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~--iv~~~d-----------~~~gKp~p~~~~~  135 (362)
                      ++|+||+.++|+.|+++|++++++|+.+...++..+ +++|+.++|+.  ++++++           ...+||+|+.+..
T Consensus       214 i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il-~~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~  292 (380)
T d1qyia_         214 LRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPF-ENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIA  292 (380)
T ss_dssp             SSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHH
T ss_pred             ccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCCcccCCcceEEecchhhhhhhhccccccccCCChHHHHH
Confidence            346779999999999999999999999999999999 89999999964  666554           3578999999999


Q ss_pred             HHHHc--------------CCCCCcEEEEecCHhhHHHHHHcCCEEEEEcCCCCccc---c--ccchhHhhccccccc
Q 017995          136 AAKRL--------------NMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH---R--YTAADEVINSLLDLR  194 (362)
Q Consensus       136 ~~~~~--------------~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~~~~~~~~---~--~ssa~~vi~~l~el~  194 (362)
                      ++..+              +..|+.|+||||+.+|+.+|+++|+.+|+|.++.....   .  ...|+.+++++.++.
T Consensus       293 ~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii~~~~el~  370 (380)
T d1qyia_         293 ALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGELR  370 (380)
T ss_dssp             HHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESSGGGHH
T ss_pred             HHHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHHhCCCCEEECCHHHHH
Confidence            88654              56789999999999999999999999999988643221   1  125788888888753

>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: NagD
species: Escherichia coli [TaxId: 562]

Probab=99.23  E-value=2.6e-11  Score=107.55  Aligned_cols=70  Identities=23%  Similarity=0.361  Sum_probs=58.1

Q ss_pred             CCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCEEEEEcCCCCccccc----cchhHhhccccccc
Q 017995          125 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRY----TAADEVINSLLDLR  194 (362)
Q Consensus       125 ~gKp~p~~~~~~~~~~~~~p~~~l~igDs~-~d~~aA~~aG~~~i~v~~~~~~~~~~----ssa~~vi~~l~el~  194 (362)
                      .+||+|.+|..+++++|++|++|+||||++ +|+.+|+++||++++|.++.......    ..|+++++++.|+.
T Consensus       174 ~~KP~p~~~~~a~~~lgi~p~e~v~IGD~~~~DI~~a~~aG~~tilV~~G~~~~~~l~~~~~~pd~i~~sl~eL~  248 (250)
T d2c4na1         174 VGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPSVAEID  248 (250)
T ss_dssp             CSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESSGGGCC
T ss_pred             cccchhhhHhhhhhhhcCCchheEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhCCCCCCEEECCHHHhC
Confidence            569999999999999999999999999997 69999999999999998864333221    13578888887753

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

Probab=99.17  E-value=1.7e-11  Score=106.36  Aligned_cols=100  Identities=14%  Similarity=0.074  Sum_probs=83.5

Q ss_pred             cCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcE---EEeCCC----------CCCCCCCHHHH
Q 017995           67 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSV---IVGSDE----------VRTGKPSPDIF  133 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~---iv~~~d----------~~~gKp~p~~~  133 (362)
                      ..++++||+.++|+.|+++|++++++|++.+..++..| +++++.++|..   .+..+.          ...+++.|...
T Consensus        72 ~~~~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l-~~l~~~~~~~an~~~~~~~~~~~~~~~~~~~~~~~~k~~~~  150 (226)
T d2feaa1          72 EDAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLL-EGIVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCK  150 (226)
T ss_dssp             HHCCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHH-TTTSCGGGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCH
T ss_pred             hccchhHHHHHHHHHHHhcccccccCCcchhhhHHHHH-HHcCCccceeeeeEEEeCCcceeccccccccccccCCHHHH
Confidence            35789999999999999999999999999999999999 88888766532   111111          12346778888


Q ss_pred             HHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEE
Q 017995          134 LEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV  167 (362)
Q Consensus       134 ~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~  167 (362)
                      ..+++++++++++|+|||||.+|+.+|++||+.+
T Consensus       151 ~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~  184 (226)
T d2feaa1         151 PSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCF  184 (226)
T ss_dssp             HHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEE
T ss_pred             HHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEE
Confidence            9999999999999999999999999999999754

>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative phosphatase SMU.1415c
species: Streptococcus mutans [TaxId: 1309]

Probab=99.15  E-value=3.2e-12  Score=113.81  Aligned_cols=122  Identities=16%  Similarity=0.168  Sum_probs=79.4

Q ss_pred             CchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcC---CcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEE
Q 017995           72 LPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHG---WNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL  148 (362)
Q Consensus        72 ~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~g---l~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l  148 (362)
                      ++-....+..+..++....|+||....+..... ...+   +...+......+...+|||+|.+|..+++++|++|++|+
T Consensus       123 ~~~~~~~~~~~~~~~~~~~i~tn~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~gKP~p~~~~~al~~l~i~~~~~~  201 (253)
T d1wvia_         123 LTYEKLTLATLAIQKGAVFIGTNPDLNIPTERG-LLPGAGAILFLLEKATRVKPIIIGKPEAVIMNKALDRLGVKRHEAI  201 (253)
T ss_dssp             CBHHHHHHHHHHHHTTCEEEESCCCSEEEETTE-EEECHHHHHHHHHHHHCCCCEECSTTSHHHHHHHHHHHTSCGGGEE
T ss_pred             cCHHHHHHHhhhhhhccccccCCCCceeEcCCc-ccccCCcchhcccccccceeEEeccCCcccceehhhhccccccceE
Confidence            333444455454555677888886432211000 0000   001112223344555789999999999999999999999


Q ss_pred             EEecCH-hhHHHHHHcCCEEEEEcCCCCccccc----cchhHhhccccccc
Q 017995          149 VIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRY----TAADEVINSLLDLR  194 (362)
Q Consensus       149 ~igDs~-~d~~aA~~aG~~~i~v~~~~~~~~~~----ssa~~vi~~l~el~  194 (362)
                      ||||+. +|+++|+++||++++|.++....+..    ..||.++.++.|++
T Consensus       202 mIGDs~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~~~~PD~vi~sl~e~~  252 (253)
T d1wvia_         202 MVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDFVLSSLAEWD  252 (253)
T ss_dssp             EEESCTTTTHHHHHHTTCEEEEESSSSSCTTTGGGCSSCCSEEESCGGGCC
T ss_pred             EEcCChHHHHHHHHHCCCCEEEECCCCCCHHHHhhcCCCCCEEECCHHHcC
Confidence            999997 59999999999999998864333221    13578888887753

>d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Hypothetical protein TM1742
species: Thermotoga maritima [TaxId: 2336]

Probab=99.14  E-value=4.2e-11  Score=106.61  Aligned_cols=70  Identities=23%  Similarity=0.314  Sum_probs=57.7

Q ss_pred             CCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCEEEEEcCCCCccccc----cchhHhhcccccc
Q 017995          124 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRY----TAADEVINSLLDL  193 (362)
Q Consensus       124 ~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~-~d~~aA~~aG~~~i~v~~~~~~~~~~----ssa~~vi~~l~el  193 (362)
                      ..+||+|.+|..+++++|++|++|+||||+. +|+.+|+++||++|+|.++.......    ..|++++.++.++
T Consensus       182 ~~~KP~p~~~~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii~~l~eL  256 (261)
T d1vjra_         182 IAGKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGEL  256 (261)
T ss_dssp             ECSTTSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHH
T ss_pred             ccCCCcHHHHHHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEECCHHHH
Confidence            4579999999999999999999999999997 79999999999999998864433221    1247778777764

>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.98  E-value=1.3e-09  Score=94.28  Aligned_cols=121  Identities=13%  Similarity=0.107  Sum_probs=81.7

Q ss_pred             cCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEe--------CCCCCCCCC--------CH
Q 017995           67 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVG--------SDEVRTGKP--------SP  130 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~--------~~d~~~gKp--------~p  130 (362)
                      ....++||+.++++.|+++|++++|+|++...+++.++ +.+|+..+  .+++        +.-.+.-++        ..
T Consensus        79 ~~~~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~-~~lgi~~~--~v~an~~~~~~~G~~~g~~~~~p~~~~~~K~  155 (217)
T d1nnla_          79 QPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVA-SKLNIPAT--NVFANRLKFYFNGEYAGFDETQPTAESGGKG  155 (217)
T ss_dssp             SCCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HHTTCCGG--GEEEECEEECTTSCEEEECTTSGGGSTTHHH
T ss_pred             hccccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHH-HHhCCccc--ceeeeeeeeeehhccccceeeeeeeccchHH
Confidence            35779999999999999999999999999999999988 88998643  1111        111111122        23


Q ss_pred             HHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEEEcCCCCccccccchhHhhcccccc
Q 017995          131 DIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL  193 (362)
Q Consensus       131 ~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~~~~~~~~~~ssa~~vi~~l~el  193 (362)
                      .......+  +.++++|++|||+.+|+.+++.+|+.+.. ............++..+.++.++
T Consensus       156 ~~v~~~~~--~~~~~~~~~vGDs~~Di~~~~~ag~~va~-~~~~~~~~~~~~ad~~i~~f~el  215 (217)
T d1nnla_         156 KVIKLLKE--KFHFKKIIMIGDGATDMEACPPADAFIGF-GGNVIRQQVKDNAKWYITDFVEL  215 (217)
T ss_dssp             HHHHHHHH--HHCCSCEEEEESSHHHHTTTTTSSEEEEE-CSSCCCHHHHHHCSEEESCGGGG
T ss_pred             HHHHHHHh--ccCccccEEEEeCHhhHHHHHhCCceEEE-CCCHHHHHHHHhCCCEeCCHHHh
Confidence            44444433  45688999999999999999999987543 32111111112345666666653

>d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative hydrolase EF1188
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.94  E-value=4.9e-10  Score=99.16  Aligned_cols=79  Identities=22%  Similarity=0.272  Sum_probs=63.6

Q ss_pred             cEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCEEEEEcCCCCcccc----ccchhHhhcc
Q 017995          115 SVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHR----YTAADEVINS  189 (362)
Q Consensus       115 ~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~-~d~~aA~~aG~~~i~v~~~~~~~~~----~ssa~~vi~~  189 (362)
                      +.++.+.....+||+|.+|..+++++|++|++|+||||+. +|+++|+++||++++|.++....+.    ...|++++++
T Consensus       168 ~~~~~~~~~~~~KP~~~~~~~~~~~~gi~~~~~l~IGD~~~~DI~~a~~aG~~si~V~~G~~~~~~~~~~~~~Pd~vi~s  247 (253)
T d1yv9a1         168 ETATQTKPVYIGKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDS  247 (253)
T ss_dssp             HHHHTCCCEECSTTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESS
T ss_pred             cccccceeeeecccchhHHHHHHHHhCCCccceEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhcCCCCCEEECC
Confidence            3444556667899999999999999999999999999997 6999999999999999875432221    1235788888


Q ss_pred             cccc
Q 017995          190 LLDL  193 (362)
Q Consensus       190 l~el  193 (362)
                      +.|+
T Consensus       248 l~e~  251 (253)
T d1yv9a1         248 LDEW  251 (253)
T ss_dssp             GGGC
T ss_pred             HHHc
Confidence            8775

>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: Polynucleotide kinase, phosphatase domain
species: Bacteriophage T4 [TaxId: 10665]

Probab=98.89  E-value=7e-09  Score=83.71  Aligned_cols=105  Identities=14%  Similarity=0.003  Sum_probs=75.9

Q ss_pred             cCCCCCchHHHHHHHHHHCCCcEEEEcCCChHh---HHHHHHhhc-----C-CcCCCcEEEeCCCCCCCCCCHHHHHHHH
Q 017995           67 CKVKALPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQH-----G-WNESFSVIVGSDEVRTGKPSPDIFLEAA  137 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~---i~~~L~~~~-----g-l~~~f~~iv~~~d~~~gKp~p~~~~~~~  137 (362)
                      ....++||+.++|+.|+++|+.++++||.++..   ....| +..     . ....++......+. ..+|++......+
T Consensus        33 ~~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~~k~~~l  110 (149)
T d1ltqa1          33 DTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYY-RMTRKWVEDIAGVPLVMQCQREQG-DTRKDDVVKEEIF  110 (149)
T ss_dssp             GGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHH-HHHHHHHHHTTCCCCSEEEECCTT-CCSCHHHHHHHHH
T ss_pred             ccCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHH-HHHhhhhhhcCCCcEEEeeccccc-ccCCchHHHHHHH
Confidence            356889999999999999999999999986422   12222 110     1 12233444444433 3456677777788


Q ss_pred             HHcCCCCCc-EEEEecCHhhHHHHHHcCCEEEEEcCC
Q 017995          138 KRLNMEPSS-SLVIEDSVIGVVAGKAAGMEVVAVPSL  173 (362)
Q Consensus       138 ~~~~~~p~~-~l~igDs~~d~~aA~~aG~~~i~v~~~  173 (362)
                      .++..++.+ +++|||+..|+++|+++|++|+.|.++
T Consensus       111 ~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~~~~V~~G  147 (149)
T d1ltqa1         111 WKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASG  147 (149)
T ss_dssp             HHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred             HHhccCCCceEEEEcCCHHHHHHHHHCCCcEEEeCCC
Confidence            787776666 567899999999999999999999875

>d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: 5' polynucleotide kinase-3' phosphatase, middle domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.72  E-value=1.8e-08  Score=85.34  Aligned_cols=95  Identities=16%  Similarity=0.293  Sum_probs=76.8

Q ss_pred             CCchHHHHHHHHHHCCCcEEEEcCCC--------hHhH----HHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHH
Q 017995           71 ALPGANRLIKHLSCHGVPMALASNSH--------RATI----ESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAK  138 (362)
Q Consensus        71 ~~pgv~~~L~~L~~~g~~~~i~S~~~--------~~~i----~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~  138 (362)
                      ++|++.+.|+.|.++|+.+.|+||.+        .+.+    +.++ +.++.  .++..+|..+..++||.|.++..+++
T Consensus        51 l~~~v~~~i~~L~~~gy~iiIvTNQ~gI~rg~~s~~~~~~~~~~i~-~~l~~--~~~i~~~~~~~~~RKP~~GM~~~~~~  127 (195)
T d1yj5a1          51 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVL-EKLGV--PFQVLVATHAGLNRKPVSGMWDHLQE  127 (195)
T ss_dssp             SCTTHHHHHHHHHHHTCEEEEEEECHHHHHTSSCHHHHHHHHHHHH-HHHTS--CCEEEEECSSSSSSTTSTHHHHHHHH
T ss_pred             ccCCHHHHHHHHHhCCcEEEEecCcchhccCCcCHHHHHHHHHHHH-HHcCC--CccEEEecCccccCCCccHHHHHHHH
Confidence            46999999999999999999999963        2222    2233 45554  34566777788899999999999999


Q ss_pred             HcC----CCCCcEEEEecC-----------------HhhHHHHHHcCCEEE
Q 017995          139 RLN----MEPSSSLVIEDS-----------------VIGVVAGKAAGMEVV  168 (362)
Q Consensus       139 ~~~----~~p~~~l~igDs-----------------~~d~~aA~~aG~~~i  168 (362)
                      +.+    ++.++++||||.                 .+|++.|.++|++..
T Consensus       128 ~~n~~~~id~~~S~~IGD~~gr~~~~~~~~~~~D~S~sD~~fA~N~gikF~  178 (195)
T d1yj5a1         128 QANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFA  178 (195)
T ss_dssp             TSSSSCCCCGGGCEEECSCCCBCTTSBTTBCSCCSCCHHHHHHHHHTCCEE
T ss_pred             HhcccccCCcCceEEEeCccCccccccccccccCcchhHHHHHHHCCCccc
Confidence            875    889999999994                 499999999999975

>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.57  E-value=9e-08  Score=80.46  Aligned_cols=102  Identities=18%  Similarity=0.229  Sum_probs=85.6

Q ss_pred             cCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCC----------CCCCCCCHHHHHHH
Q 017995           67 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDE----------VRTGKPSPDIFLEA  136 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d----------~~~gKp~p~~~~~~  136 (362)
                      ....+++|+.++++.+..+|..+.++|++....+.... ...+....+......++          ...+++.+..+...
T Consensus        72 ~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (210)
T d1j97a_          72 KRITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIK-EKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKI  150 (210)
T ss_dssp             HTCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HHHTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHH
T ss_pred             hhhhhhhhHHHHHHHHHHcCCEEEeecccccccccchh-hccchhhhhhhhhccccccccccccccccccccccchhhhH
Confidence            46789999999999999999999999999999888777 66677665554443333          33456678889999


Q ss_pred             HHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEE
Q 017995          137 AKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA  169 (362)
Q Consensus       137 ~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~  169 (362)
                      ++.+++.+++|++|||+.+|+.+++.+|+.+.+
T Consensus       151 ~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~  183 (210)
T d1j97a_         151 AKIEGINLEDTVAVGDGANDISMFKKAGLKIAF  183 (210)
T ss_dssp             HHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE
T ss_pred             HHHhcccccceEEecCCcChHHHHHHCCCCEEE
Confidence            999999999999999999999999999998765

>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Cation-transporting ATPase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.70  E-value=0.00011  Score=57.75  Aligned_cols=88  Identities=13%  Similarity=0.171  Sum_probs=70.1

Q ss_pred             CCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEE
Q 017995           69 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL  148 (362)
Q Consensus        69 ~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l  148 (362)
                      -++.|++.++++.|++.|+++.++|......+..+- +.+|+    +.+++       .-.|+--....++++.. ..+.
T Consensus        20 D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia-~~lgI----~~v~~-------~~~p~~k~~~v~~~q~~-~~v~   86 (135)
T d2b8ea1          20 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAIS-RELNL----DLVIA-------EVLPHQKSEEVKKLQAK-EVVA   86 (135)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHHTC----SEEEC-------SCCHHHHHHHHHHHTTT-SCEE
T ss_pred             CCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHH-hhhhh----hhhcc-------ccchhHHHHHHHHHHcC-CEEE
Confidence            357899999999999999999999999999877665 78888    44432       33456556666666654 6889


Q ss_pred             EEecCHhhHHHHHHcCCEEEE
Q 017995          149 VIEDSVIGVVAGKAAGMEVVA  169 (362)
Q Consensus       149 ~igDs~~d~~aA~~aG~~~i~  169 (362)
                      ||||..+|..+-+.+++.+..
T Consensus        87 ~vGDg~nD~~aL~~Advgia~  107 (135)
T d2b8ea1          87 FVGDGINDAPALAQADLGIAV  107 (135)
T ss_dssp             EEECSSSSHHHHHHSSEEEEE
T ss_pred             EEeCCCCcHHHHHhCCeeeec
Confidence            999999999999999887643

>d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Class B acid phosphatase, AphA
domain: Class B acid phosphatase, AphA
species: Escherichia coli [TaxId: 562]

Probab=97.68  E-value=3.7e-05  Score=64.72  Aligned_cols=96  Identities=15%  Similarity=0.141  Sum_probs=67.2

Q ss_pred             CCCCCchHHHHHHHHHHCCCcEEEEcCCCh---HhHHHHHHhhcCCc--CCCcEEEeCCCCCCCCCCHHHHHHHHHHcCC
Q 017995           68 KVKALPGANRLIKHLSCHGVPMALASNSHR---ATIESKISYQHGWN--ESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM  142 (362)
Q Consensus        68 ~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~---~~i~~~L~~~~gl~--~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~  142 (362)
                      ...+.||+.++++.++++|+++.++||..+   +.....|.+.+|+.  +.-+.++.+++-  .|..-   ...++++++
T Consensus        84 ~A~p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~~--~K~~r---r~~Ik~y~I  158 (209)
T d2b82a1          84 FSIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDKP--GQNTK---SQWLQDKNI  158 (209)
T ss_dssp             GCEECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCCT--TCCCS---HHHHHHTTE
T ss_pred             ccCcchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCCCC--CchHH---HHHHHHcCe
Confidence            467889999999999999999999999654   33334453446763  332344544432  23322   233345555


Q ss_pred             CCCcEEEEecCHhhHHHHHHcCCEEEEEcC
Q 017995          143 EPSSSLVIEDSVIGVVAGKAAGMEVVAVPS  172 (362)
Q Consensus       143 ~p~~~l~igDs~~d~~aA~~aG~~~i~v~~  172 (362)
                          .+++||...|+.+|+++|+++|-|-.
T Consensus       159 ----~l~~GD~l~Df~aA~eagi~~iRi~r  184 (209)
T d2b82a1         159 ----RIFYGDSDNDITAARDVGARGIRILR  184 (209)
T ss_dssp             ----EEEEESSHHHHHHHHHTTCEEEECCC
T ss_pred             ----EEEecCCHHHHhHHHHcCCCceEeec
Confidence                78899999999999999999998854

>d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5' nucleotidase-like
domain: Cytosolic IMP-GMP specific 5'-nucleotidase
species: Legionella pneumophila [TaxId: 446]

Probab=97.57  E-value=4.1e-05  Score=71.85  Aligned_cols=105  Identities=16%  Similarity=0.166  Sum_probs=79.5

Q ss_pred             CCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhc--------CCcCCCcEEEeCCC---------------CCC
Q 017995           69 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQH--------GWNESFSVIVGSDE---------------VRT  125 (362)
Q Consensus        69 ~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~--------gl~~~f~~iv~~~d---------------~~~  125 (362)
                      +..-|.+..+|..|+++|-++.++||++-++++..+.-.+        ++.++||.||+...               ...
T Consensus       184 v~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~m~y~~~~~~~~g~dWr~lFDvVIv~A~KP~FF~~~~~~~~v~~~~  263 (458)
T d2bdea1         184 VIREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNPEN  263 (458)
T ss_dssp             EECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHHGGGSCTTCCGGGTEEEEEESCCHHHHHHSCCCEEEECTTT
T ss_pred             hcCChhHHHHHHHHHHcCCeEEEEecCcHHHHHHHhhhhcccCCCCCCChHHhceEEEeCCCCCCccCCCCcceEEeCCC
Confidence            4456889999999999999999999999999887773334        78889999988632               000


Q ss_pred             C---------CC---CHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHH-HcCCEEEEEcCC
Q 017995          126 G---------KP---SPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGK-AAGMEVVAVPSL  173 (362)
Q Consensus       126 g---------Kp---~p~~~~~~~~~~~~~p~~~l~igDs~-~d~~aA~-~aG~~~i~v~~~  173 (362)
                      |         ||   .-+......+.+|....++++|||+. .|+..++ ..|++++.|-+.
T Consensus       264 g~l~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~E  325 (458)
T d2bdea1         264 GTMTNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVEE  325 (458)
T ss_dssp             CCEEECCSCCCSEEEEECCHHHHHHHTTCCGGGEEEEESSCCSCHHHHHHHHCSEEEEECTT
T ss_pred             CccccCCccccCCccccCCHHHHHHHhCCCCCcEEEECCccchhhhhhhhhcCCceEEehHH
Confidence            1         11   01224455566789999999999999 8977764 679999988663

>d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Pyrimidine 5'-nucleotidase (UMPH-1)
domain: Cytosolic 5'-nucleotidase III
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.52  E-value=4.8e-05  Score=67.73  Aligned_cols=96  Identities=19%  Similarity=0.169  Sum_probs=66.3

Q ss_pred             CCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEe-----CCCCC---CCCC--C----HHHH
Q 017995           68 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVG-----SDEVR---TGKP--S----PDIF  133 (362)
Q Consensus        68 ~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~-----~~d~~---~gKp--~----p~~~  133 (362)
                      .+.+.||+.++++.|+++|++++|+|++-..+++.++ +++|+...--.|++     .++.-   +..|  +    -...
T Consensus       133 ~i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl-~~lg~~~~ni~I~sN~l~f~~~~~~~~~~~~~i~~~~K~~~~  211 (291)
T d2bdua1         133 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVI-RQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGA  211 (291)
T ss_dssp             CCCBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHH-HHTTCCBTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHH
T ss_pred             CCCcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHH-HHcCCCccCceEEeeEEEEeCCeeEeeccCCccccccCcchh
Confidence            5889999999999999999999999999999999999 77887432113444     11110   1111  1    1222


Q ss_pred             HHHHH--HcCCCCCcEEEEecCHhhHHHHHHcC
Q 017995          134 LEAAK--RLNMEPSSSLVIEDSVIGVVAGKAAG  164 (362)
Q Consensus       134 ~~~~~--~~~~~p~~~l~igDs~~d~~aA~~aG  164 (362)
                      .....  +..-...++++|||+.+|+.+|..+.
T Consensus       212 ~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~  244 (291)
T d2bdua1         212 LKNTDYFSQLKDNSNIILLGDSQGDLRMADGVA  244 (291)
T ss_dssp             HTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCS
T ss_pred             hhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCc
Confidence            22222  23346688999999999999887653

>d1mrza2 c.26.1.3 (A:2-158) FMN adenylyltransferase domain of bifunctional FAD synthetase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Adenylyltransferase
domain: FMN adenylyltransferase domain of bifunctional FAD synthetase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.37  E-value=1.5e-05  Score=64.47  Aligned_cols=98  Identities=18%  Similarity=0.168  Sum_probs=63.8

Q ss_pred             HHHHHHHHHHCCCcEEE-----EcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 017995           75 ANRLIKHLSCHGVPMAL-----ASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV  149 (362)
Q Consensus        75 v~~~L~~L~~~g~~~~i-----~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~  149 (362)
                      ..+-++.|.+.|+...+     .+.++++|++.++ .  ++    +.||+|+|+++|+......                
T Consensus        55 ~~~k~~~l~~~g~~~~l~f~~~~~ls~~~Fi~~~l-~--~~----~~ivvG~Df~FG~~r~G~~----------------  111 (157)
T d1mrza2          55 VESRVEMLSRYARTVVLDFFRIKDLTPEGFVERYL-S--GV----SAVVVGRDFRFGKNASGNA----------------  111 (157)
T ss_dssp             HHHHHHHHTTTSCEEEECHHHHTTCCHHHHHHHHC-T--TC----CEEEEETTCCBSGGGCBCH----------------
T ss_pred             HHHhhhhhhcccceeeehhhhHhhhhhhHHHHHHh-h--cC----cEEEEecCcccccccccch----------------
Confidence            34444555555543322     2457888888766 3  33    7899999999996532222                


Q ss_pred             EecCHhhHHHHHHcCCEEEEEcCCCCccccccchhHhhcccccccccccCCCCCCccccCCCCCC
Q 017995          150 IEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSE  214 (362)
Q Consensus       150 igDs~~d~~aA~~aG~~~i~v~~~~~~~~~~ssa~~vi~~l~el~~~~~~l~~~~~~~a~~lLgr  214 (362)
                              ..-++.|+.+..++....++..+|| +.+++.+.+++++.          |+.||||
T Consensus       112 --------~~Lk~~g~~v~~i~~~~~~~~~ISS-T~IR~~l~~G~i~~----------A~~lLGR  157 (157)
T d1mrza2         112 --------SFLRKKGVEVYEIEDVVVQGKRVSS-SLIRNLVQEGRVEE----------IPAYLGR  157 (157)
T ss_dssp             --------HHHHHTTCEEEEECCCEETTEECCH-HHHHHHHHTTCTTT----------THHHHSS
T ss_pred             --------hhhccceeEEEeeccEeeCCcEEcH-HHHHHHHHcCCHHH----------HHHhcCC
Confidence                    2234678999888886666666754 55555566787764          9999997

>d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Probable phosphatase YrbI
domain: Probable phosphatase YrbI
species: Haemophilus influenzae, HI1679 [TaxId: 727]

Probab=97.37  E-value=0.00045  Score=56.65  Aligned_cols=85  Identities=15%  Similarity=0.159  Sum_probs=68.6

Q ss_pred             HHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhH
Q 017995           78 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV  157 (362)
Q Consensus        78 ~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~  157 (362)
                      .+..|++.|+.+.++|......+.... ..+++    ..++.+     .++....+...++++++++++|++|||..+|+
T Consensus        40 gi~~l~~~gi~~~iis~~~~~~v~~~~-~~l~~----~~~~~~-----~~~K~~~l~~~~~~~~i~~~~v~~vGDd~nDl  109 (177)
T d1k1ea_          40 GIKMLMDADIQVAVLSGRDSPILRRRI-ADLGI----KLFFLG-----KLEKETACFDLMKQAGVTAEQTAYIGDDSVDL  109 (177)
T ss_dssp             HHHHHHHTTCEEEEEESCCCHHHHHHH-HHHTC----CEEEES-----CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred             HHHHHhhhcEEEEEecCCchhHHHHHH-hhhcc----cccccc-----cccHHHHHHHHHHHhcCCcceeEEecCCccHH
Confidence            478889999999999998888887777 66665    334332     34556778888999999999999999999999


Q ss_pred             HHHHHcCCEEEEEcC
Q 017995          158 VAGKAAGMEVVAVPS  172 (362)
Q Consensus       158 ~aA~~aG~~~i~v~~  172 (362)
                      .+-+.+|+.++.-+.
T Consensus       110 ~~l~~~g~siap~nA  124 (177)
T d1k1ea_         110 PAFAACGTSFAVADA  124 (177)
T ss_dssp             HHHHHSSEEEECTTS
T ss_pred             HHHhhCCeEEEcCCc
Confidence            999999988765443

>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=97.31  E-value=0.00061  Score=56.97  Aligned_cols=44  Identities=18%  Similarity=0.106  Sum_probs=39.2

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEE
Q 017995          126 GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA  169 (362)
Q Consensus       126 gKp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~  169 (362)
                      +.+.+..+..++++++++++++++|||+.+|+.+.+.+|+.+.+
T Consensus       150 ~~~K~~al~~l~~~~~i~~~~~~~iGD~~NDi~ml~~ag~~vav  193 (230)
T d1wr8a_         150 WINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAV  193 (230)
T ss_dssp             TCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred             CcCcchhhcccccccccchhheeeeecCccHHHHHHHCCeEEEE
Confidence            45668889999999999999999999999999999999987543

>d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Homoserine kinase ThrH
domain: Homoserine kinase ThrH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.29  E-value=0.00038  Score=57.11  Aligned_cols=103  Identities=13%  Similarity=0.078  Sum_probs=76.5

Q ss_pred             cCCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCC----CCCCCCHHHHHHHHHHcCC
Q 017995           67 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEV----RTGKPSPDIFLEAAKRLNM  142 (362)
Q Consensus        67 ~~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~----~~gKp~p~~~~~~~~~~~~  142 (362)
                      ......++....+..++ .+++..++|........... ..++....+.......+.    ....+.+......++.+++
T Consensus        66 ~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i  143 (206)
T d1rkua_          66 ATLKPLEGAVEFVDWLR-ERFQVVILSDTFYEFSQPLM-RQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKS  143 (206)
T ss_dssp             TTCCCCTTHHHHHHHHH-TTSEEEEEEEEEHHHHHHHH-HHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHH
T ss_pred             hhccccchHHHHHHHhh-cCceEEEeccCchHHHHHHH-HHhCCchhhcceeeeecccccccccccchhhHHHHHHHhcc
Confidence            46788889988888776 57899999999888877776 666665443332221111    1224445566777889999


Q ss_pred             CCCcEEEEecCHhhHHHHHHcCCEEEEEcC
Q 017995          143 EPSSSLVIEDSVIGVVAGKAAGMEVVAVPS  172 (362)
Q Consensus       143 ~p~~~l~igDs~~d~~aA~~aG~~~i~v~~  172 (362)
                      ++++|++|||+.+|+.+.+.||+.+.. ..
T Consensus       144 ~~~eviaiGDg~NDi~Ml~~Ag~gIAm-na  172 (206)
T d1rkua_         144 LYYRVIAAGDSYNDTTMLSEAHAGILF-HA  172 (206)
T ss_dssp             TTCEEEEEECSSTTHHHHHHSSEEEEE-SC
T ss_pred             cccceEEecCCccCHHHHHhCCccEEE-CC
Confidence            999999999999999999999999876 44

>d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Calcium ATPase, catalytic domain P
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=97.05  E-value=0.00074  Score=54.80  Aligned_cols=99  Identities=12%  Similarity=0.022  Sum_probs=69.9

Q ss_pred             CCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCc----EEEeCCCC----------------CCCCCC
Q 017995           70 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS----VIVGSDEV----------------RTGKPS  129 (362)
Q Consensus        70 ~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~----~iv~~~d~----------------~~gKp~  129 (362)
                      ++.|++.++++.|++.|+++.++|+........+- +.+|+...-.    ....+.++                -+.+-.
T Consensus        20 p~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia-~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~   98 (168)
T d1wpga2          20 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAIC-RRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVE   98 (168)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEESCC
T ss_pred             CCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHH-HHcCCCCCccccccccccccccchhhHHHHhhhhhhhhhhhccc
Confidence            67899999999999999999999999998877666 7788743211    11221111                122334


Q ss_pred             HHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEE
Q 017995          130 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA  169 (362)
Q Consensus       130 p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~  169 (362)
                      |+.=....+.++-....+.|+||..+|..+-+.+.+.+..
T Consensus        99 p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~  138 (168)
T d1wpga2          99 PSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAM  138 (168)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEE
T ss_pred             hhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEEEe
Confidence            5444444444444457899999999999999999877644

>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=96.78  E-value=0.0022  Score=53.72  Aligned_cols=40  Identities=15%  Similarity=-0.014  Sum_probs=35.5

Q ss_pred             HHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEE
Q 017995          130 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA  169 (362)
Q Consensus       130 p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~  169 (362)
                      ...+..+++++|+++++|++|||+.+|+.+.+.+|+.+.+
T Consensus       153 ~~ai~~l~~~~~i~~~~v~~~GDs~nD~~m~~~a~~~vav  192 (225)
T d1l6ra_         153 AFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACP  192 (225)
T ss_dssp             HHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEEC
T ss_pred             HHHHHHHhhhhccchhheeeecCCcchHHHHHHCCeEEEE
Confidence            5667788899999999999999999999999999986643

>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YwpJ
species: Bacillus subtilis [TaxId: 1423]

Probab=96.49  E-value=0.0081  Score=51.71  Aligned_cols=41  Identities=24%  Similarity=0.220  Sum_probs=35.9

Q ss_pred             CHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEE
Q 017995          129 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA  169 (362)
Q Consensus       129 ~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~  169 (362)
                      ....+..+++.+|+++++++++||+.+|+.+.+.+|..+++
T Consensus       214 K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam  254 (285)
T d1nrwa_         214 KGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAM  254 (285)
T ss_dssp             HHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEEC
T ss_pred             hhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEe
Confidence            35667888899999999999999999999999999987743

>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YidA
species: Escherichia coli [TaxId: 562]

Probab=96.39  E-value=0.009  Score=51.03  Aligned_cols=48  Identities=13%  Similarity=0.161  Sum_probs=36.4

Q ss_pred             CCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEE
Q 017995           70 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIV  118 (362)
Q Consensus        70 ~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv  118 (362)
                      .+.|.+.++|+.|+++|++++++|+.+...+...+ +.+++...+.+++
T Consensus        21 ~i~~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~-~~l~l~~~~~~~i   68 (271)
T d1rkqa_          21 TISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYL-KELHMEQPGDYCI   68 (271)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHH-HHTTCCSTTCEEE
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHH-HHhcCcCCCcEEE
Confidence            45578889999999999999999998877777777 6666655444433

>d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NLI interacting factor-like phosphatase
domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.83  E-value=0.0012  Score=54.26  Aligned_cols=86  Identities=12%  Similarity=0.106  Sum_probs=67.3

Q ss_pred             CCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEE
Q 017995           69 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL  148 (362)
Q Consensus        69 ~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~~~~~~p~~~l  148 (362)
                      +...||+.++|+.+.+. |.++|-|++.+++++.++ +.++-...|......+++...++.   +..-+..+|-+.++++
T Consensus        54 v~~RP~l~eFL~~l~~~-yei~I~Ta~~~~YA~~il-~~ldp~~~~~~~~~r~~c~~~~~~---~~KdL~~l~~~l~~vv  128 (181)
T d1ta0a_          54 VLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVA-DLLDKWGAFRARLFRESCVFHRGN---YVKDLSRLGRDLRRVL  128 (181)
T ss_dssp             EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHH-HHHCSSCCEEEEECGGGSEEETTE---EECCGGGSCSCGGGEE
T ss_pred             EecCCCHHHHHHHHHhc-eEEEEEcCCcHHHHHHHH-HHhccCCceeEEEEeeeeeecCCc---ccccHhhcCCCHHHeE
Confidence            45799999999999987 999999999999999998 777776777777776665543321   2234567788899999


Q ss_pred             EEecCHhhHHH
Q 017995          149 VIEDSVIGVVA  159 (362)
Q Consensus       149 ~igDs~~d~~a  159 (362)
                      +|.|++.-...
T Consensus       129 ivDd~~~~~~~  139 (181)
T d1ta0a_         129 ILDNSPASYVF  139 (181)
T ss_dssp             EECSCGGGGTT
T ss_pred             EEcCChhhhhc
Confidence            99999865543

>d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5'(3')-deoxyribonucleotidase (dNT-2)
domain: 5'(3')-deoxyribonucleotidase (dNT-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.81  E-value=0.048  Score=44.26  Aligned_cols=90  Identities=16%  Similarity=0.148  Sum_probs=58.0

Q ss_pred             hcCCCCCchHHHHHHHHHHCCC-cEEEEcCCChHh---HH---HHHHhhcCCcCCCcEEEeCCCCCCCCCCHHHHHHHHH
Q 017995           66 LCKVKALPGANRLIKHLSCHGV-PMALASNSHRAT---IE---SKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAK  138 (362)
Q Consensus        66 ~~~~~~~pgv~~~L~~L~~~g~-~~~i~S~~~~~~---i~---~~L~~~~gl~~~f~~iv~~~d~~~gKp~p~~~~~~~~  138 (362)
                      +..++++||+.++|+.|++.|. .+.++|..+...   ..   .-|.++++-......+++++     |.          
T Consensus        70 f~~L~p~~gA~e~l~~L~~~~~~~v~i~t~~~~~~~~~~~~k~~Wl~~~~~~~~~~~~~~t~~-----K~----------  134 (195)
T d1q92a_          70 FFELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFGPDFLEQIVLTRD-----KT----------  134 (195)
T ss_dssp             TTTCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHCGGGGGGEEECSC-----ST----------
T ss_pred             HhhCCcccCHHHHHHHHhhccCccceEEccccccCcchHHHHHHHHHHhcCCCCccEEEEccc-----cc----------
Confidence            4789999999999999998654 577788765321   11   23423333222223444432     21          


Q ss_pred             HcCCCCCcEEEEecCHhhHHHHHHcCCEEEEEcCCC
Q 017995          139 RLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP  174 (362)
Q Consensus       139 ~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~~~~  174 (362)
                        .+..  -++|+|++.-+.++.++|+.+++.....
T Consensus       135 --~~~~--d~lIDD~p~n~~~~~~~g~~~il~~~~~  166 (195)
T d1q92a_         135 --VVSA--DLLIDDRPDITGAEPTPSWEHVLFTACH  166 (195)
T ss_dssp             --TSCC--SEEEESCSCCCCSCSSCSSEEEEECCTT
T ss_pred             --eecC--eEEecCcHHHHHHHhcCCCeEEEECCCc
Confidence              1111  2899999988888889999999987643

>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar phosphatase SupH (YbiV)
species: Escherichia coli [TaxId: 562]

Probab=92.94  E-value=0.041  Score=46.61  Aligned_cols=42  Identities=19%  Similarity=0.116  Sum_probs=37.7

Q ss_pred             CHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEEE
Q 017995          129 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV  170 (362)
Q Consensus       129 ~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v  170 (362)
                      ....+..+++++|++++++++|||+.+|+.+-+.+|..+++-
T Consensus       191 K~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~  232 (269)
T d1rlma_         191 KANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMG  232 (269)
T ss_dssp             HHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECT
T ss_pred             HHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeC
Confidence            457888889999999999999999999999999999988743

>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar-phosphate phosphatase BT4131
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=91.46  E-value=0.079  Score=44.69  Aligned_cols=44  Identities=11%  Similarity=0.113  Sum_probs=37.9

Q ss_pred             CCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEEEcC
Q 017995          128 PSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS  172 (362)
Q Consensus       128 p~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~v~~  172 (362)
                      .....+..++++++++++++++|||+.+|+.+-+.+|..+ .|..
T Consensus       186 sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~sv-av~n  229 (260)
T d2rbka1         186 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGV-AMGQ  229 (260)
T ss_dssp             SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEE-ECTT
T ss_pred             CHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEE-EeCC
Confidence            3457788999999999999999999999999999999965 4443

>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Escherichia coli [TaxId: 562]

Probab=91.45  E-value=0.067  Score=43.68  Aligned_cols=35  Identities=11%  Similarity=0.119  Sum_probs=29.8

Q ss_pred             HHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 017995          134 LEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV  168 (362)
Q Consensus       134 ~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i  168 (362)
                      ...++++|++++++++|||+.+|+.+-+.+|..++
T Consensus       193 ~~~~~~l~i~~~~~iafGD~~NDl~Ml~~a~~~va  227 (232)
T d1xvia_         193 IATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVI  227 (232)
T ss_dssp             HHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEE
T ss_pred             HHHHHHcCCChhcEEEEcCCHhHHHHHHhCCeEEE
Confidence            33445679999999999999999999999998664

>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sucrose-phosphatase Slr0953
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=90.10  E-value=0.1  Score=43.42  Aligned_cols=41  Identities=24%  Similarity=0.201  Sum_probs=36.4

Q ss_pred             CHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEEE
Q 017995          129 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA  169 (362)
Q Consensus       129 ~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i~  169 (362)
                      .......+++++|+++++|+++||+.+|+.+-+.+|..+++
T Consensus       163 K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav  203 (244)
T d1s2oa1         163 KGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIV  203 (244)
T ss_dssp             HHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEEC
T ss_pred             hhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEEEe
Confidence            45788899999999999999999999999999999976643

>d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein TM0651
species: Thermotoga maritima [TaxId: 2336]

Probab=89.67  E-value=0.11  Score=43.86  Aligned_cols=40  Identities=18%  Similarity=0.188  Sum_probs=36.3

Q ss_pred             CHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 017995          129 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV  168 (362)
Q Consensus       129 ~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i  168 (362)
                      ....+..++++++++++++++|||+.+|+.+-+.+|..++
T Consensus       191 K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva  230 (267)
T d1nf2a_         191 KGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVA  230 (267)
T ss_dssp             HHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEE
T ss_pred             hhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEE
Confidence            4577889999999999999999999999999999998754

>d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: PFL1270w orthologue
species: Plasmodium vivax [TaxId: 5855]

Probab=88.96  E-value=0.17  Score=42.60  Aligned_cols=42  Identities=12%  Similarity=0.003  Sum_probs=37.3

Q ss_pred             CCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 017995          127 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV  168 (362)
Q Consensus       127 Kp~p~~~~~~~~~~~~~p~~~l~igDs~~d~~aA~~aG~~~i  168 (362)
                      ......+..+++.++++++++++|||+.+|+.+-+.+|..++
T Consensus       206 ~~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va  247 (283)
T d2b30a1         206 HDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFA  247 (283)
T ss_dssp             CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEE
T ss_pred             chhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEE
Confidence            345678888999999999999999999999999999998764

>d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: AF1437-like
domain: Hypothetical protein AF1437
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=86.63  E-value=3.7  Score=34.11  Aligned_cols=41  Identities=17%  Similarity=0.139  Sum_probs=36.2

Q ss_pred             CCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHHHHHhhcCC
Q 017995           68 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGW  110 (362)
Q Consensus        68 ~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~~L~~~~gl  110 (362)
                      .+.+.||+.++|+.|.+. .+..|+|.+-..++++.- .+.|+
T Consensus        79 ~~~lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~-~~~gf  119 (308)
T d1y8aa1          79 SAKFVPDAEKAMATLQER-WTPVVISTSYTQYLRRTA-SMIGV  119 (308)
T ss_dssp             HCCBCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHH-HHTTC
T ss_pred             ceeecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHH-hhcCC
Confidence            479999999999999987 899999999999988766 77777

>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=84.62  E-value=0.56  Score=38.08  Aligned_cols=44  Identities=7%  Similarity=-0.121  Sum_probs=36.6

Q ss_pred             CHHHHHHHHHHcC-CCCCcEEEEecCHhhHHHHHHcCCEEEEEcC
Q 017995          129 SPDIFLEAAKRLN-MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS  172 (362)
Q Consensus       129 ~p~~~~~~~~~~~-~~p~~~l~igDs~~d~~aA~~aG~~~i~v~~  172 (362)
                      ....+...++.++ ..+++|++|||+.+|+..-+.+|..+++=+.
T Consensus       180 K~~al~~l~~~~~~~~~~~~~a~GD~~ND~~Ml~~a~~~va~~Na  224 (243)
T d1wzca1         180 KGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSL  224 (243)
T ss_dssp             HHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSC
T ss_pred             cHHHHHHHHHHhcCCCcccEEEEcCCHhHHHHHHcCCcEEEeCCC
Confidence            4567778888884 8899999999999999999999987766443

>d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: BT0820-like
domain: Hypothetical protein BT0820
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=83.50  E-value=0.42  Score=35.60  Aligned_cols=35  Identities=17%  Similarity=0.084  Sum_probs=30.1

Q ss_pred             CCCCCchHHHHHHHHHHCCCcEEEEcCCChHhHHH
Q 017995           68 KVKALPGANRLIKHLSCHGVPMALASNSHRATIES  102 (362)
Q Consensus        68 ~~~~~pgv~~~L~~L~~~g~~~~i~S~~~~~~i~~  102 (362)
                      ..+|.|++.++|+.|+++|+.+.+.|..+......
T Consensus        19 ~~kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~   53 (122)
T d2obba1          19 IGEEIPFAVETLKLLQQEKHRLILWSVREGELLDE   53 (122)
T ss_dssp             CCCBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHH
T ss_pred             cccccHHHHHHHHHHHHCCCeEEEEecCCCcchHH
Confidence            46799999999999999999999999988765443