Citrus Sinensis ID: 018012

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360--
MESRVLSRATTTTTTISSLRRSPLENHQNVSFISLKPIGAVGEGGNVIWGRQLRPALLLESSNAPAGLFAGKKEILRPILATASSPAEGSDSAGEAAPVRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQMEEEKRQMKAA
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
cccHHHccHHHHHHccccccccccccccccccccccccccccccccEEccccccccccccccccccccccccccccccHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcHHHHHHccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHEEEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHcc
mesrvlsrattttttisslrrsplenhqnvsfislkpigavgeggnviwgrqlrpalllessnapaglfagkkEILRPilatasspaegsdsageaapvrffdrypalvTGFFFFMWYFLNVIFNILNkriynyfpypynvSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYskkamtdmdstNIYAYISIIALFvcippaiivegpqlIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFgnkistqtgIGTVIAIAGVAAYSYIKAQMEEEKRQMKAA
mesrvlsrattttttisslrrsplenhqnvsFISLKPIGAVGEGGNVIWGRQLRPALLLESSNAPAGLFAGKKEILRPILATasspaegsdsaGEAAPVRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQMEEEKRQMKAA
MESRVLSRAttttttISSLRRSPLENHQNVSFISLKPIGAVGEGGNVIWGRQLRPALLLESSNAPAGLFAGKKEILRPILATASSPAEGSDSAGEAAPVRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQtgigtviaiagvaaYSYIKAQMEEEKRQMKAA
*****************************VSFISLKPIGAVGEGGNVIWGRQLRPALLLESSNAPAGLFAGKKEILRPIL*****************PVRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIK*************
**********************************************************************************************************ALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS****************
****************SSLRRSPLENHQNVSFISLKPIGAVGEGGNVIWGRQLRPALLLESSNAPAGLFAGKKEILRPILAT*************AAPVRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQM**********
*****************************VSFISLKPIGAVGEGGNVIWGRQLRPALLLESSNAPAGLFA*KKEILRP***TAS**************VRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQMEE********
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiii
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
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MESRVLSRATTTTTTISSLRRSPLENHQNVSFISLKPIGAVGEGGNVIWGRQLRPALLLESSNAPAGLFAGKKEILRPILATASSPAEGSDSAGEAAPVRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQMEEEKRQMKAA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query362 2.2.26 [Sep-21-2011]
P21727402 Triose phosphate/phosphat N/A no 0.961 0.865 0.677 1e-150
Q9ZSR7410 Triose phosphate/phosphat yes no 0.980 0.865 0.681 1e-150
P49131408 Triose phosphate/phosphat N/A no 0.983 0.872 0.661 1e-148
P49132407 Triose phosphate/phosphat N/A no 0.980 0.872 0.652 1e-146
P11869404 Triose phosphate/phosphat N/A no 0.964 0.863 0.655 1e-145
P52177407 Triose phosphate/phosphat N/A no 0.966 0.859 0.673 1e-143
P29463414 Triose phosphate/phosphat N/A no 0.972 0.850 0.622 1e-135
Q9FTT3417 Triose phosphate/phosphat no no 0.856 0.743 0.656 1e-135
P49133409 Triose phosphate/phosphat N/A no 0.883 0.782 0.666 1e-128
Q9LF61417 Xylulose 5-phosphate/phos no no 0.809 0.702 0.350 8e-47
>sp|P21727|TPT_PEA Triose phosphate/phosphate translocator, chloroplastic OS=Pisum sativum PE=1 SV=1 Back     alignment and function desciption
 Score =  531 bits (1369), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 282/416 (67%), Positives = 310/416 (74%), Gaps = 68/416 (16%)

Query: 1   MESRVLSRATTTTT--TISSLRRSPLENHQNVSFISLKPIGAVGEGGNVIWGRQLRPALL 58
           MESRVLSRATT ++  T++ L R PL N    S  S+K  G+V +GGN++WGRQLRP L 
Sbjct: 1   MESRVLSRATTLSSLPTLNKLHRLPLAN---ASLPSVKSFGSVSDGGNLVWGRQLRPELC 57

Query: 59  LESSNAPAGLFAGKKEILRPILATASSPAEGSDSAGE--AAPVRFFDRYPALVTGFFFFM 116
                  + +      +LRP  ATA     G+DSAGE   APV FF RYPAL TGFFFF 
Sbjct: 58  -------SPVLKKGASLLRPCPATAG----GNDSAGEEKVAPVGFFSRYPALTTGFFFFT 106

Query: 117 WYFLNVIFNILNKRIYNYFPYPY------------------------------------- 139
           WYFLNVIFNILNK+IYNYFPYPY                                     
Sbjct: 107 WYFLNVIFNILNKKIYNYFPYPYFVSVIHLAVGVVYCLVSWTVGLPKRAPIDGNLLKLLI 166

Query: 140 -------------NVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVV 186
                        NVSFAAVAVSFTHT+KALEPFFNAAASQFILGQ +P+TLWLSLAPVV
Sbjct: 167 PVAVCHALGHVTSNVSFAAVAVSFTHTVKALEPFFNAAASQFILGQSIPITLWLSLAPVV 226

Query: 187 IGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCI 246
           IGVSMASLTELSFNW GFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIAL VCI
Sbjct: 227 IGVSMASLTELSFNWLGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALIVCI 286

Query: 247 PPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAV 306
           PPA+I+EGP L+K G +DAI+KVG+VKF+SDLFWVGMFYHLYNQ+ATNTLERVAPLTHAV
Sbjct: 287 PPALIIEGPTLLKTGFNDAIAKVGLVKFVSDLFWVGMFYHLYNQVATNTLERVAPLTHAV 346

Query: 307 GNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQMEEEKRQMKAA 362
           GNVLKRVFVIGFSI+ FGNKISTQTGIGT IAIAGVA YS+IKAQ+EEEKRQ KAA
Sbjct: 347 GNVLKRVFVIGFSIIIFGNKISTQTGIGTGIAIAGVALYSFIKAQIEEEKRQAKAA 402
Mediates the export of fixed carbons from the chloroplasts into the cytosol in the form of triose phosphates.
Pisum sativum (taxid: 3888)
>sp|Q9ZSR7|TPT_ARATH Triose phosphate/phosphate translocator TPT, chloroplastic OS=Arabidopsis thaliana GN=TPT PE=2 SV=1 Back     alignment and function description
>sp|P49131|TPT_FLAPR Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria pringlei GN=TPT PE=2 SV=1 Back     alignment and function description
>sp|P49132|TPT_FLATR Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria trinervia GN=TPT PE=2 SV=1 Back     alignment and function description
>sp|P11869|TPT_SPIOL Triose phosphate/phosphate translocator, chloroplastic OS=Spinacia oleracea PE=1 SV=1 Back     alignment and function description
>sp|P52177|TPT1_BRAOB Triose phosphate/phosphate translocator, chloroplastic OS=Brassica oleracea var. botrytis GN=TPT PE=2 SV=1 Back     alignment and function description
>sp|P29463|TPT_SOLTU Triose phosphate/phosphate translocator, chloroplastic OS=Solanum tuberosum GN=TPT PE=2 SV=1 Back     alignment and function description
>sp|Q9FTT3|TPT_ORYSJ Triose phosphate/phosphate translocator TPT, chloroplastic OS=Oryza sativa subsp. japonica GN=TPT PE=2 SV=1 Back     alignment and function description
>sp|P49133|TPT_MAIZE Triose phosphate/phosphate translocator, chloroplastic OS=Zea mays GN=TPT PE=1 SV=1 Back     alignment and function description
>sp|Q9LF61|XPT_ARATH Xylulose 5-phosphate/phosphate translocator, chloroplastic OS=Arabidopsis thaliana GN=XPT PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query362
255536723406 Triose phosphate/phosphate translocator, 0.980 0.874 0.726 1e-165
224077056408 predicted protein [Populus trichocarpa] 0.977 0.867 0.723 1e-164
224125582408 predicted protein [Populus trichocarpa] 0.983 0.872 0.724 1e-164
225443598406 PREDICTED: triose phosphate/phosphate tr 0.980 0.874 0.723 1e-163
147834373443 hypothetical protein VITISV_028555 [Viti 0.966 0.790 0.725 1e-160
356521410429 PREDICTED: LOW QUALITY PROTEIN: triose p 0.977 0.825 0.693 1e-157
356548666406 PREDICTED: triose phosphate/phosphate tr 0.972 0.866 0.701 1e-156
449433798411 PREDICTED: triose phosphate/phosphate tr 0.980 0.863 0.686 1e-154
403023401 phosphate translocator [Nicotiana tabacu 0.966 0.872 0.677 1e-149
9295273404 triose phosphate/phosphate translocator 0.958 0.858 0.675 1e-149
>gi|255536723|ref|XP_002509428.1| Triose phosphate/phosphate translocator, chloroplast precursor, putative [Ricinus communis] gi|223549327|gb|EEF50815.1| Triose phosphate/phosphate translocator, chloroplast precursor, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  586 bits (1510), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 300/413 (72%), Positives = 327/413 (79%), Gaps = 58/413 (14%)

Query: 1   MESRVLSRATTTTTTISSLRRSPLENHQNVSFISLKPIGAVGEGGNVIWGRQLRPALLLE 60
           MESRVLSRATTT +++  LRR P+      SF+S+KPIG VGEGGN+IWGRQLRP+LLLE
Sbjct: 1   MESRVLSRATTTLSSLPHLRR-PMRESNTTSFVSMKPIGTVGEGGNLIWGRQLRPSLLLE 59

Query: 61  SSNAPAGLFAGKKEILRPILATASSPAEGSDSAGE-AAPVRFFDRYPALVTGFFFFMWYF 119
           SS A       K+E LRP +A ASSPAEGSDS+G+  APV FF++YPALVTGFFFFMWYF
Sbjct: 60  SSPAT------KRENLRPTMAAASSPAEGSDSSGDKVAPVGFFEKYPALVTGFFFFMWYF 113

Query: 120 LNVIFNILNKRIYNYFPYPY---------------------------------------- 139
           LNVIFNILNK+IYNYFPYPY                                        
Sbjct: 114 LNVIFNILNKKIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSNLLKLLIPVA 173

Query: 140 ----------NVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGV 189
                     NVSFAAVAVSFTHTIKALEPFFNAAASQFILGQ +P+TLWLSLAPVVIGV
Sbjct: 174 VCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPITLWLSLAPVVIGV 233

Query: 190 SMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPA 249
           SMASLTELSFNW GFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPA
Sbjct: 234 SMASLTELSFNWIGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPA 293

Query: 250 IIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNV 309
           II EGPQL+K+G +DAI+KVG  KFI+DLFWVGMFYHLYNQLATNTLERVAPLTHAVGNV
Sbjct: 294 IIFEGPQLMKYGFNDAIAKVGTTKFITDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNV 353

Query: 310 LKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQMEEEKRQMKAA 362
           LKRVFVIGFSI+ FGNKISTQTGIGT IAIAGVA YS++KA++EEEKRQ K A
Sbjct: 354 LKRVFVIGFSIVVFGNKISTQTGIGTCIAIAGVAMYSFLKAKIEEEKRQGKTA 406

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224077056|ref|XP_002305112.1| predicted protein [Populus trichocarpa] gi|222848076|gb|EEE85623.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224125582|ref|XP_002329840.1| predicted protein [Populus trichocarpa] gi|222870902|gb|EEF08033.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225443598|ref|XP_002278829.1| PREDICTED: triose phosphate/phosphate translocator TPT, chloroplastic [Vitis vinifera] gi|297740430|emb|CBI30612.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147834373|emb|CAN65381.1| hypothetical protein VITISV_028555 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356521410|ref|XP_003529349.1| PREDICTED: LOW QUALITY PROTEIN: triose phosphate/phosphate translocator, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|356548666|ref|XP_003542721.1| PREDICTED: triose phosphate/phosphate translocator, chloroplastic [Glycine max] Back     alignment and taxonomy information
>gi|449433798|ref|XP_004134684.1| PREDICTED: triose phosphate/phosphate translocator, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|403023|emb|CAA52979.1| phosphate translocator [Nicotiana tabacum] Back     alignment and taxonomy information
>gi|9295273|gb|AAF86906.1|AF223358_1 triose phosphate/phosphate translocator precursor [Mesembryanthemum crystallinum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query362
TAIR|locus:2161423415 APE2 "ACCLIMATION OF PHOTOSYNT 0.602 0.525 0.839 1.4e-94
TAIR|locus:2036778388 GPT2 "glucose-6-phosphate/phos 0.566 0.528 0.415 2.3e-39
TAIR|locus:2160175388 GPT1 "glucose 6-phosphate/phos 0.566 0.528 0.415 6.1e-39
TAIR|locus:2151381417 AT5G17630 "AT5G17630" [Arabido 0.580 0.503 0.418 9.9e-39
UNIPROTKB|Q84QU8407 PPT2 "Phosphoenolpyruvate/phos 0.569 0.506 0.421 1.2e-35
TAIR|locus:2084203383 PPT2 "phosphoenolpyruvate (pep 0.580 0.548 0.415 1.3e-34
GENEDB_PFALCIPARUM|PFE0410w342 PFE0410w "triose or hexose pho 0.569 0.602 0.355 1.9e-33
UNIPROTKB|Q8I420342 PfoTPT "Triose phosphate trans 0.569 0.602 0.355 1.9e-33
UNIPROTKB|Q69VR7408 PPT1 "Phosphoenolpyruvate/phos 0.574 0.509 0.383 3.2e-33
UNIPROTKB|Q5VQL3393 PPT3 "Phosphoenolpyruvate/phos 0.574 0.529 0.378 1.8e-30
TAIR|locus:2161423 APE2 "ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 941 (336.3 bits), Expect = 1.4e-94, P = 1.4e-94
 Identities = 183/218 (83%), Positives = 197/218 (90%)

Query:   140 NVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSF 199
             NVSFAAVAVSFTHTIKALEPFFNAAASQFI+GQ +P+TLWLSLAPVV+GV+MASLTELSF
Sbjct:   188 NVSFAAVAVSFTHTIKALEPFFNAAASQFIMGQSIPITLWLSLAPVVLGVAMASLTELSF 247

Query:   200 NWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIK 259
             NW GFISAMISNISFTYRSI+SKKAMTDMDSTN+YAYISIIALFVCIPPAIIVEGP+L+ 
Sbjct:   248 NWLGFISAMISNISFTYRSIFSKKAMTDMDSTNVYAYISIIALFVCIPPAIIVEGPKLLN 307

Query:   260 HGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFS 319
             HG +DAI+KVGM KFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFS
Sbjct:   308 HGFADAIAKVGMTKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFS 367

Query:   320 ILAFGNKISTQXXXXXXXXXXXXXXYSYIKAQMEEEKR 357
             I+ FGNKISTQ              YS IKA++EEEKR
Sbjct:   368 IVIFGNKISTQTGIGTGIAIAGVAMYSIIKAKIEEEKR 405
GO:0005215 "transporter activity" evidence=IEA
GO:0005739 "mitochondrion" evidence=ISM
GO:0006810 "transport" evidence=IEA
GO:0015297 "antiporter activity" evidence=ISS
GO:0016021 "integral to membrane" evidence=IEA
GO:0015120 "phosphoglycerate transmembrane transporter activity" evidence=IDA
GO:0015713 "phosphoglycerate transport" evidence=IDA
GO:0015717 "triose phosphate transport" evidence=IMP
GO:0035436 "triose phosphate transmembrane transport" evidence=IDA
GO:0071917 "triose-phosphate transmembrane transporter activity" evidence=IMP;IDA
GO:0009643 "photosynthetic acclimation" evidence=IMP
GO:0009941 "chloroplast envelope" evidence=IDA
GO:0009507 "chloroplast" evidence=IDA
GO:0016020 "membrane" evidence=IDA
GO:0009534 "chloroplast thylakoid" evidence=IDA
GO:0019344 "cysteine biosynthetic process" evidence=RCA
GO:0019684 "photosynthesis, light reaction" evidence=RCA
GO:0035304 "regulation of protein dephosphorylation" evidence=RCA
TAIR|locus:2036778 GPT2 "glucose-6-phosphate/phosphate translocator 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2160175 GPT1 "glucose 6-phosphate/phosphate translocator 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2151381 AT5G17630 "AT5G17630" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q84QU8 PPT2 "Phosphoenolpyruvate/phosphate translocator 2, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2084203 PPT2 "phosphoenolpyruvate (pep)/phosphate translocator 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
GENEDB_PFALCIPARUM|PFE0410w PFE0410w "triose or hexose phosphate / phosphate translocator, putative" [Plasmodium falciparum (taxid:5833)] Back     alignment and assigned GO terms
UNIPROTKB|Q8I420 PfoTPT "Triose phosphate transporter" [Plasmodium falciparum 3D7 (taxid:36329)] Back     alignment and assigned GO terms
UNIPROTKB|Q69VR7 PPT1 "Phosphoenolpyruvate/phosphate translocator 1, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|Q5VQL3 PPT3 "Phosphoenolpyruvate/phosphate translocator 3, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P11869TPT_SPIOLNo assigned EC number0.65540.96400.8638N/Ano
Q9ZSR7TPT_ARATHNo assigned EC number0.68100.98060.8658yesno
P29463TPT_SOLTUNo assigned EC number0.62260.97230.8502N/Ano
P52177TPT1_BRAOBNo assigned EC number0.67300.96680.8599N/Ano
P21727TPT_PEANo assigned EC number0.67780.96130.8656N/Ano
P49131TPT_FLAPRNo assigned EC number0.66180.98340.8725N/Ano
P49132TPT_FLATRNo assigned EC number0.65210.98060.8722N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query362
TIGR00817302 TIGR00817, tpt, Tpt phosphate/phosphoenolpyruvate 1e-114
PTZ00343350 PTZ00343, PTZ00343, triose or hexose phosphate/pho 1e-51
pfam03151149 pfam03151, TPT, Triose-phosphate Transporter famil 1e-35
COG0697292 COG0697, RhaT, Permeases of the drug/metabolite tr 0.002
>gnl|CDD|129898 TIGR00817, tpt, Tpt phosphate/phosphoenolpyruvate translocator Back     alignment and domain information 
 Score =  333 bits (855), Expect = e-114
 Identities = 151/302 (50%), Positives = 180/302 (59%), Gaps = 53/302 (17%)

Query: 108 LVTGFFFFMWYFLNVIFNILNKRIYNYFPYPY---------------------------- 139
           L TG  F +WYFLNV FNI NK++ N FPYPY                            
Sbjct: 1   LQTGLLFGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKI 60

Query: 140 ----------------------NVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLT 177
                                 NVS + VAVSFTHTIKA+EPFF+   S F LGQ+ P T
Sbjct: 61  SSALLKLLLPVAIVHTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPST 120

Query: 178 LWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMT--DMDSTNIYA 235
           LWLSL P+V GV++AS TELSFNW GF+SAMISNI+F  R+I+SKKAMT   +D TN+YA
Sbjct: 121 LWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYA 180

Query: 236 YISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGM-FYHLYNQLATN 294
           YISI++LF+  PPA I EGP  + HG   AIS V + K  +      M F+H Y Q+A  
Sbjct: 181 YISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFM 240

Query: 295 TLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQMEE 354
            L RV+PLTH+VGN +KRV VI  SIL FG KIS Q   GT IAIAGV  YS +KAQ  +
Sbjct: 241 LLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQKPK 300

Query: 355 EK 356
            K
Sbjct: 301 PK 302

The 6-8 TMS Triose-phosphate Transporter (TPT) Family (TC 2.A.7.9)Functionally characterized members of the TPT family are derived from the inner envelope membranes of chloroplasts and nongreen plastids of plants. However,homologues are also present in yeast. Saccharomyces cerevisiae has three functionally uncharacterized TPT paralogues encoded within its genome. Under normal physiologicalconditions, chloroplast TPTs mediate a strict antiport of substrates, frequently exchanging an organic three carbon compound phosphate ester for inorganic phosphate (Pi).Normally, a triose-phosphate, 3-phosphoglycerate, or another phosphorylated C3 compound made in the chloroplast during photosynthesis, exits the organelle into thecytoplasm of the plant cell in exchange for Pi. However, experiments with reconstituted translocator in artificial membranes indicate that transport can also occur by achannel-like uniport mechanism with up to 10-fold higher transport rates. Channel opening may be induced by a membrane potential of large magnitude and/or by high substrateconcentrations. Nongreen plastid and chloroplast carriers, such as those from maize endosperm and root membranes, mediate transport of C3 compounds phosphorylated atcarbon atom 2, particularly phosphenolpyruvate, in exchange for Pi. These are the phosphoenolpyruvate:Pi antiporters (PPT). Glucose-6-P has also been shown to be asubstrate of some plastid translocators (GPT). The three types of proteins (TPT, PPT and GPT) are divergent in sequence as well as substrate specificity, but their substratespecificities overlap [Hypothetical proteins, Conserved]. Length = 302
>gnl|CDD|240371 PTZ00343, PTZ00343, triose or hexose phosphate/phosphate translocator; Provisional Back     alignment and domain information
>gnl|CDD|217390 pfam03151, TPT, Triose-phosphate Transporter family Back     alignment and domain information
>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 362
KOG1441316 consensus Glucose-6-phosphate/phosphate and phosph 100.0
PTZ00343350 triose or hexose phosphate/phosphate translocator; 100.0
TIGR00817302 tpt Tpt phosphate/phosphoenolpyruvate translocator 100.0
KOG1443349 consensus Predicted integral membrane protein [Fun 99.93
KOG2765416 consensus Predicted membrane protein [Function unk 99.93
KOG1444314 consensus Nucleotide-sugar transporter VRG4/SQV-7 99.93
PF06027334 DUF914: Eukaryotic protein of unknown function (DU 99.9
PF08449303 UAA: UAA transporter family; InterPro: IPR013657 T 99.9
KOG1442347 consensus GDP-fucose transporter [Carbohydrate tra 99.9
PLN00411358 nodulin MtN21 family protein; Provisional 99.87
COG5070309 VRG4 Nucleotide-sugar transporter [Carbohydrate tr 99.85
TIGR00950260 2A78 Carboxylate/Amino Acid/Amine Transporter. 99.83
PRK11689295 aromatic amino acid exporter; Provisional 99.82
PRK11453299 O-acetylserine/cysteine export protein; Provisiona 99.81
PF03151153 TPT: Triose-phosphate Transporter family; InterPro 99.81
PRK11272292 putative DMT superfamily transporter inner membran 99.79
PRK15430296 putative chloramphenical resistance permease RarD; 99.76
PRK10532293 threonine and homoserine efflux system; Provisiona 99.74
TIGR03340281 phn_DUF6 phosphonate utilization associated putati 99.71
COG0697292 RhaT Permeases of the drug/metabolite transporter 99.66
KOG1581327 consensus UDP-galactose transporter related protei 99.63
KOG1580337 consensus UDP-galactose transporter related protei 99.61
KOG4510346 consensus Permease of the drug/metabolite transpor 99.57
PF04142244 Nuc_sug_transp: Nucleotide-sugar transporter; Inte 99.54
TIGR00776290 RhaT RhaT L-rhamnose-proton symporter family prote 99.53
KOG1582367 consensus UDP-galactose transporter related protei 99.52
KOG1583330 consensus UDP-N-acetylglucosamine transporter [Car 99.47
KOG3912372 consensus Predicted integral membrane protein [Gen 99.43
TIGR00688256 rarD rarD protein. This uncharacterized protein is 99.43
KOG2234345 consensus Predicted UDP-galactose transporter [Car 99.34
COG2962293 RarD Predicted permeases [General function predict 99.34
KOG2766336 consensus Predicted membrane protein [Function unk 99.3
KOG4314290 consensus Predicted carbohydrate/phosphate translo 99.18
TIGR00803222 nst UDP-galactose transporter. NSTs generally appe 99.18
COG5006292 rhtA Threonine/homoserine efflux transporter [Amin 99.1
PF00892126 EamA: EamA-like transporter family; InterPro: IPR0 99.1
COG2510140 Predicted membrane protein [Function unknown] 99.02
PRK15430 296 putative chloramphenical resistance permease RarD; 98.87
TIGR00688256 rarD rarD protein. This uncharacterized protein is 98.85
TIGR03340 281 phn_DUF6 phosphonate utilization associated putati 98.65
PLN00411 358 nodulin MtN21 family protein; Provisional 98.52
PF06800269 Sugar_transport: Sugar transport protein; InterPro 98.44
PRK11689 295 aromatic amino acid exporter; Provisional 98.23
PRK11272 292 putative DMT superfamily transporter inner membran 98.16
PTZ00343 350 triose or hexose phosphate/phosphate translocator; 98.14
COG2962 293 RarD Predicted permeases [General function predict 98.11
PRK02971129 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl 98.11
PRK11453 299 O-acetylserine/cysteine export protein; Provisiona 98.1
PF05653300 Mg_trans_NIPA: Magnesium transporter NIPA; InterPr 98.07
TIGR00950 260 2A78 Carboxylate/Amino Acid/Amine Transporter. 98.02
PF13536113 EmrE: Multidrug resistance efflux transporter 98.01
TIGR00817 302 tpt Tpt phosphate/phosphoenolpyruvate translocator 97.97
PF13536113 EmrE: Multidrug resistance efflux transporter 97.91
TIGR00776 290 RhaT RhaT L-rhamnose-proton symporter family prote 97.76
KOG2922335 consensus Uncharacterized conserved protein [Funct 97.56
COG0697 292 RhaT Permeases of the drug/metabolite transporter 97.54
PRK13499345 rhamnose-proton symporter; Provisional 97.49
PRK15051111 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl 97.45
PF08449 303 UAA: UAA transporter family; InterPro: IPR013657 T 97.43
PF00892126 EamA: EamA-like transporter family; InterPro: IPR0 97.39
PRK15051111 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl 97.38
PRK10532 293 threonine and homoserine efflux system; Provisiona 97.27
PF04142 244 Nuc_sug_transp: Nucleotide-sugar transporter; Inte 97.18
PF06027 334 DUF914: Eukaryotic protein of unknown function (DU 97.18
PF04657138 DUF606: Protein of unknown function, DUF606; Inter 97.08
PRK13499 345 rhamnose-proton symporter; Provisional 96.88
KOG2234 345 consensus Predicted UDP-galactose transporter [Car 96.81
PRK09541110 emrE multidrug efflux protein; Reviewed 96.72
PRK10452120 multidrug efflux system protein MdtJ; Provisional 96.72
COG2076106 EmrE Membrane transporters of cations and cationic 96.55
PRK11431105 multidrug efflux system protein; Provisional 96.52
COG2510140 Predicted membrane protein [Function unknown] 96.44
PRK10650109 multidrug efflux system protein MdtI; Provisional 96.44
PF07857 254 DUF1632: CEO family (DUF1632); InterPro: IPR012435 96.15
COG2076106 EmrE Membrane transporters of cations and cationic 96.05
PRK02971129 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl 95.98
PRK09541110 emrE multidrug efflux protein; Reviewed 95.98
PRK10452120 multidrug efflux system protein MdtJ; Provisional 95.95
PRK10650109 multidrug efflux system protein MdtI; Provisional 95.85
PRK11431105 multidrug efflux system protein; Provisional 95.71
COG4975288 GlcU Putative glucose uptake permease [Carbohydrat 95.71
PF03151153 TPT: Triose-phosphate Transporter family; InterPro 95.6
PF06379 344 RhaT: L-rhamnose-proton symport protein (RhaT); In 95.07
COG3238150 Uncharacterized protein conserved in bacteria [Fun 95.04
PF05653 300 Mg_trans_NIPA: Magnesium transporter NIPA; InterPr 94.66
PF0089393 Multi_Drug_Res: Small Multidrug Resistance protein 93.65
PF10639113 UPF0546: Uncharacterised protein family UPF0546; I 93.41
PF0089393 Multi_Drug_Res: Small Multidrug Resistance protein 92.59
PF06800 269 Sugar_transport: Sugar transport protein; InterPro 92.06
KOG4510 346 consensus Permease of the drug/metabolite transpor 91.86
KOG2765 416 consensus Predicted membrane protein [Function unk 91.56
KOG1581 327 consensus UDP-galactose transporter related protei 90.85
COG5006292 rhtA Threonine/homoserine efflux transporter [Amin 90.35
KOG4314 290 consensus Predicted carbohydrate/phosphate translo 89.6
TIGR00803222 nst UDP-galactose transporter. NSTs generally appe 87.76
KOG1580 337 consensus UDP-galactose transporter related protei 86.66
PF10639113 UPF0546: Uncharacterised protein family UPF0546; I 85.5
KOG1444 314 consensus Nucleotide-sugar transporter VRG4/SQV-7 83.62
KOG1441 316 consensus Glucose-6-phosphate/phosphate and phosph 80.31
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=3.8e-38  Score=299.34  Aligned_cols=243  Identities=41%  Similarity=0.583  Sum_probs=218.7

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHhhHHhh--hCCCcc--------------------------------------------
Q 018012          106 PALVTGFFFFMWYFLNVIFNILNKRIYN--YFPYPY--------------------------------------------  139 (362)
Q Consensus       106 ~~l~~~~~~~~w~~~s~~~~i~NK~il~--~f~~P~--------------------------------------------  139 (362)
                      +.+..+.++..||++|+.++++||++++  +|+||+                                            
T Consensus        14 ~~~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~   93 (316)
T KOG1441|consen   14 KILRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVF   93 (316)
T ss_pred             hhHHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHH
Confidence            4677889999999999999999999999  799998                                            


Q ss_pred             -------eeeecccchHHHHHHHHhhHHHHHHHHHHHhccccChhhhhhhccccceeEEEeecCccccHHHHHHHHHHHH
Q 018012          140 -------NVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNI  212 (362)
Q Consensus       140 -------n~sL~~~svs~~~iiks~~Pvft~lls~l~l~er~s~~~~~sl~l~v~Gv~l~~~~~~s~~~~G~ilalls~l  212 (362)
                             |.|+.|++||++|++|+++|+|++++++++.+|++++..++++++++.||++++.+|.+||+.|++.++++++
T Consensus        94 ~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a~~s~~  173 (316)
T KOG1441|consen   94 CISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLFGFISAMISNL  173 (316)
T ss_pred             HHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHHHHHHHHHHHH
Confidence                   9999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhc----CCChHHHHHHHHHHHHHHHH-HHHHHhcchhhhhcchhhhhhhhchHHHHHHHHHHHHHHHH
Q 018012          213 SFTYRSIYSKKAMT----DMDSTNIYAYISIIALFVCI-PPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHL  287 (362)
Q Consensus       213 ~~a~~~vl~k~~~~----~~~~~~~~~~~~~~s~i~l~-p~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~l  287 (362)
                      .++++++++|+.++    ++|+++++.|+++++++.++ |+....|+... . ++..  ...+.. ++. ++++.+++|+
T Consensus       174 ~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~-~-~~~~--~~~~~~-~~~-~~~~sv~~f~  247 (316)
T KOG1441|consen  174 AFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKF-V-GFLT--APWFVT-FLI-LLLNSVLAFL  247 (316)
T ss_pred             HHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccce-e-eeec--cccchh-hHH-HHHHHHHHHH
Confidence            99999999999883    48999999999999999999 88887777654 1 1111  112222 233 3444499999


Q ss_pred             HHHHHHHHhhccChHHHHHHHHHHHHHHHHHHHHHhCCcccHhHHHHHHHHHHHHHHHHhhhhchHH
Q 018012          288 YNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQMEE  354 (362)
Q Consensus       288 ~~~~~~~~l~~~splt~sv~~~lk~v~~i~~s~l~fge~~s~~~iiG~~lil~Gv~ly~~~k~~~~~  354 (362)
                      +|+..|++++++||+|++|+|++|++++++.|+++|++++|+.|++|++++++|+++|++.|.++++
T Consensus       248 ~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~~  314 (316)
T KOG1441|consen  248 LNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEKK  314 (316)
T ss_pred             HHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhhc
Confidence            9999999999999999999999999999999999999999999999999999999999999987654

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional Back     alignment and domain information
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator Back     alignment and domain information
>KOG1443 consensus Predicted integral membrane protein [Function unknown] Back     alignment and domain information
>KOG2765 consensus Predicted membrane protein [Function unknown] Back     alignment and domain information
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function Back     alignment and domain information
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine [] Back     alignment and domain information
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PLN00411 nodulin MtN21 family protein; Provisional Back     alignment and domain information
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion] Back     alignment and domain information
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter Back     alignment and domain information
>PRK11689 aromatic amino acid exporter; Provisional Back     alignment and domain information
>PRK11453 O-acetylserine/cysteine export protein; Provisional Back     alignment and domain information
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins Back     alignment and domain information
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional Back     alignment and domain information
>PRK15430 putative chloramphenical resistance permease RarD; Provisional Back     alignment and domain information
>PRK10532 threonine and homoserine efflux system; Provisional Back     alignment and domain information
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein Back     alignment and domain information
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only] Back     alignment and domain information
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only] Back     alignment and domain information
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles Back     alignment and domain information
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein Back     alignment and domain information
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG3912 consensus Predicted integral membrane protein [General function prediction only] Back     alignment and domain information
>TIGR00688 rarD rarD protein Back     alignment and domain information
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG2962 RarD Predicted permeases [General function prediction only] Back     alignment and domain information
>KOG2766 consensus Predicted membrane protein [Function unknown] Back     alignment and domain information
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only] Back     alignment and domain information
>TIGR00803 nst UDP-galactose transporter Back     alignment and domain information
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism] Back     alignment and domain information
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown Back     alignment and domain information
>COG2510 Predicted membrane protein [Function unknown] Back     alignment and domain information
>PRK15430 putative chloramphenical resistance permease RarD; Provisional Back     alignment and domain information
>TIGR00688 rarD rarD protein Back     alignment and domain information
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein Back     alignment and domain information
>PLN00411 nodulin MtN21 family protein; Provisional Back     alignment and domain information
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long Back     alignment and domain information
>PRK11689 aromatic amino acid exporter; Provisional Back     alignment and domain information
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional Back     alignment and domain information
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional Back     alignment and domain information
>COG2962 RarD Predicted permeases [General function prediction only] Back     alignment and domain information
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional Back     alignment and domain information
>PRK11453 O-acetylserine/cysteine export protein; Provisional Back     alignment and domain information
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function Back     alignment and domain information
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter Back     alignment and domain information
>PF13536 EmrE: Multidrug resistance efflux transporter Back     alignment and domain information
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator Back     alignment and domain information
>PF13536 EmrE: Multidrug resistance efflux transporter Back     alignment and domain information
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein Back     alignment and domain information
>KOG2922 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only] Back     alignment and domain information
>PRK13499 rhamnose-proton symporter; Provisional Back     alignment and domain information
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional Back     alignment and domain information
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine [] Back     alignment and domain information
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown Back     alignment and domain information
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional Back     alignment and domain information
>PRK10532 threonine and homoserine efflux system; Provisional Back     alignment and domain information
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles Back     alignment and domain information
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function Back     alignment and domain information
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins Back     alignment and domain information
>PRK13499 rhamnose-proton symporter; Provisional Back     alignment and domain information
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09541 emrE multidrug efflux protein; Reviewed Back     alignment and domain information
>PRK10452 multidrug efflux system protein MdtJ; Provisional Back     alignment and domain information
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK11431 multidrug efflux system protein; Provisional Back     alignment and domain information
>COG2510 Predicted membrane protein [Function unknown] Back     alignment and domain information
>PRK10650 multidrug efflux system protein MdtI; Provisional Back     alignment and domain information
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function Back     alignment and domain information
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional Back     alignment and domain information
>PRK09541 emrE multidrug efflux protein; Reviewed Back     alignment and domain information
>PRK10452 multidrug efflux system protein MdtJ; Provisional Back     alignment and domain information
>PRK10650 multidrug efflux system protein MdtI; Provisional Back     alignment and domain information
>PRK11431 multidrug efflux system protein; Provisional Back     alignment and domain information
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins Back     alignment and domain information
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family Back     alignment and domain information
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function Back     alignment and domain information
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins Back     alignment and domain information
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function Back     alignment and domain information
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins Back     alignment and domain information
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long Back     alignment and domain information
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only] Back     alignment and domain information
>KOG2765 consensus Predicted membrane protein [Function unknown] Back     alignment and domain information
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism] Back     alignment and domain information
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only] Back     alignment and domain information
>TIGR00803 nst UDP-galactose transporter Back     alignment and domain information
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function Back     alignment and domain information
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query362
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 43.3 bits (101), Expect = 1e-04
 Identities = 59/454 (12%), Positives = 123/454 (27%), Gaps = 151/454 (33%)

Query: 16  ISSLRRSPLENHQNVSFISLKPIGAVGEG-------------------GNVIW---GRQL 53
              LR++ L   +    + +   G +G G                     + W       
Sbjct: 137 YLKLRQA-LLELRPAKNVLID--GVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCN 193

Query: 54  RPALLLESSNAPAGLFAGKKEILRPILATASSPAEGSDSAGEAAPVRFFDRYPALVTGFF 113
            P  +LE              +L+ +L                  +R       L     
Sbjct: 194 SPETVLE--------------MLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRR--L 237

Query: 114 FFMWYFLN---VIFNILNKRIYNYF---------------------PYPYNVSFAAVAVS 149
                + N   V+ N+ N + +N F                         ++S    +++
Sbjct: 238 LKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMT 297

Query: 150 FTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGF----- 204
            T   +           +    Q LP  + L+  P  + +   S+ +    W  +     
Sbjct: 298 LTPD-EVKSLLLKYLDCRP---QDLPREV-LTTNPRRLSIIAESIRDGLATWDNWKHVNC 352

Query: 205 ------ISAMISNISFT-YRSIY------------------------------------S 221
                 I + ++ +    YR ++                                     
Sbjct: 353 DKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLH 412

Query: 222 KKAMTDMDSTNIYAYISIIALFVCIPP-------AIIVEGPQLIKHGLSDAISKVGMVKF 274
           K ++ +         I  I L + +           IV+   + K   SD +    + ++
Sbjct: 413 KYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQY 472

Query: 275 ISDLFW-VGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKI----ST 329
               +  +G  +HL N       ER+         + + VF+  F  L    KI    + 
Sbjct: 473 F---YSHIG--HHLKN---IEHPERM--------TLFRMVFL-DFRFL--EQKIRHDSTA 513

Query: 330 QTGIGTVIA-IAGVAAY-SYIKAQMEEEKRQMKA 361
               G+++  +  +  Y  YI     + +R + A
Sbjct: 514 WNASGSILNTLQQLKFYKPYICDNDPKYERLVNA 547

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query362
2i68_A137 Protein EMRE; transmembrane protein, small-multidr 98.17
3b5d_A110 Multidrug transporter EMRE; helical membrane prote 97.73
3b5d_A110 Multidrug transporter EMRE; helical membrane prote 97.42
2i68_A137 Protein EMRE; transmembrane protein, small-multidr 97.21
>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli} Back     alignment and structure
Probab=98.17  E-value=4.3e-06  Score=69.77  Aligned_cols=65  Identities=20%  Similarity=0.168  Sum_probs=43.6

Q ss_pred             HHHHHHHHHHHhhccChHHHHHH-HHHHHHHHHHHHHHHhCCcccHhHHHHHHHHHHHHHHHHhhh
Q 018012          285 YHLYNQLATNTLERVAPLTHAVG-NVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIK  349 (362)
Q Consensus       285 ~~l~~~~~~~~l~~~splt~sv~-~~lk~v~~i~~s~l~fge~~s~~~iiG~~lil~Gv~ly~~~k  349 (362)
                      +.+..+++..++++.++...... ..+.|++++++++++|||++++.+++|+++++.|+++.+..+
T Consensus        40 ~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           40 YCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            33444456667788888766555 789999999999999999999999999999999999988654
>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A* Back     alignment and structure
>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A* Back     alignment and structure
>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00