Citrus Sinensis ID: 018069

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-
Protein Sequence
MVPERAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQSQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLGKDEESKYNTEKAMITVSENTWAAKSSVVQPLLPTINES
Secondary Structure (PSIPRED)
cccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHcHHHHHHHHHHHHHcccccccccccEEEEHHHHHHHHHHEEEEEcccccccccccccccccHHHHcccccccccccccHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHEEEEcHHHHHHHHHcccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHEHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHEEEEHHHHHHHHHHHHHHccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccccHEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHcccccHHHccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
MVPERAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFayflekkdrptltYSFLLQFFLLGLVGitlnqgsyifgldntspiFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASvitlykgpivyrpnsasdqsqSQMLLLgdtkeknwtlGCICLIghclfwsswivlqspvlkkyparlSVVSYSCFFSLMQFSAIGAyferdsaawqfHSGWEIFCVFYSGLVASAMSFAVQIWVIdrggpmfvsayLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLGkdeeskynTEKAMITVSENTWAakssvvqpllptines
Flexible Loop (DISEMBL)
MVPERAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQSQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLGKDEESKYNTEKAMITVsentwaakssvvqpllptines
Low Complexity Region (SEG)
MVPERAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSfllqffllglVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQSQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLGKDEESKYNTEKAMITVSENTWAAKSSVVQPLLPTINES
Disordered region (IsUnstruct)
*******LHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYR************LLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLGKDEESKYNTEKAMITVSENTWAA***************
Disordered Region (DISOPRED)
*****AK*HLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPN*******************NWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVL***************************************
Disordered Region (DISEMBL)
MVPERAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQSQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLGKDEESKYNTEKAMITVSENTWAAKSSVVQPLLPTINES
Disordered Region (DISPRO)
MVPERAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNS*****************KNWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLGKD************************************
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVPERAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQSQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLGKDEESKYNTEKAMITVSENTWAAKSSVVQPLLPTINES
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	361	2.2.26 [Sep-21-2011]
Q94AP3	389	Protein WALLS ARE THIN 1	yes	no	0.975	0.904	0.622	1e-132
F4J9A3	369	WAT1-related protein At3g	no	no	0.983	0.962	0.618	1e-130
Q6J163	410	Auxin-induced protein 5NG	N/A	no	0.939	0.826	0.571	1e-110
Q9LV20	383	WAT1-related protein At3g	no	no	0.916	0.864	0.492	5e-94
Q9FL41	402	WAT1-related protein At5g	no	no	0.891	0.800	0.400	2e-61
Q9SUF1	384	WAT1-related protein At4g	no	no	0.891	0.838	0.374	6e-60
Q501F8	373	WAT1-related protein At4g	no	no	0.914	0.884	0.363	3e-58
Q9M0B8	373	WAT1-related protein At4g	no	no	0.950	0.919	0.366	5e-58
F4HZQ7	389	WAT1-related protein At1g	no	no	0.908	0.843	0.364	7e-58
F4KD68	381	WAT1-related protein At5g	no	no	0.927	0.879	0.363	1e-57

>sp|Q94AP3|WAT1_ARATH Protein WALLS ARE THIN 1 OS=Arabidopsis thaliana GN=WAT1 PE=1 SV=1

 Score =  472 bits (1214), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 231/371 (62%), Positives = 286/371 (77%), Gaps = 19/371 (5%)

Query: 2   VPERAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKK 61
           VPE+ +LH+AM   QFGYAG HV+ R ALNMG+SKLVFP+YRNIIA+++L+PFAYFLEKK
Sbjct: 14  VPEKLQLHIAMLTLQFGYAGFHVVSRAALNMGISKLVFPVYRNIIALLLLLPFAYFLEKK 73

Query: 62  DRPTLTYSFLLQFFLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRI 121
           +RP +T +FL+QFF L L+GIT NQG Y+ GLDNTSP FAS+++N+VPA+TF+MA LLRI
Sbjct: 74  ERPAITLNFLIQFFFLALIGITANQGFYLLGLDNTSPTFASSMQNSVPAITFLMAALLRI 133

Query: 122 EQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASD----QSQSQMLL-LGDT 176
           E++ + R+DGI+K+LGT + V GASVITLYKGP +Y P S        + S +L  LG+ 
Sbjct: 134 EKVRINRRDGISKILGTALCVAGASVITLYKGPTIYTPASHLHAHLLTTNSAVLAPLGNA 193

Query: 177 KEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFER 236
             KNWTLGCI LIGHCL WS W+V Q+PVLK YPARLSV SY+CFF ++QF  I A+ ER
Sbjct: 194 APKNWTLGCIYLIGHCLSWSGWLVFQAPVLKSYPARLSVTSYTCFFGIIQFLIIAAFCER 253

Query: 237 DSAAWQFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATI 296
           DS AW FHSGWE+F + Y+G+VAS ++FAVQIW IDRGGP+FV+ Y PVQT++VAIMA+I
Sbjct: 254 DSQAWVFHSGWELFTILYAGIVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASI 313

Query: 297 ALGEEFYLGGVIGASLIIAGLYLVVLGKDEESKYNT-EKAMIT-----------VSENTW 344
           ALGEEFYLGG+IGA LIIAGLY V+ GK EE K+   EKA I            VS N+ 
Sbjct: 314 ALGEEFYLGGIIGAVLIIAGLYFVLYGKSEERKFAALEKAAIQSSAEHGIERAPVSRNS- 372

Query: 345 AAKSSVVQPLL 355
             KSS+  PLL
Sbjct: 373 -IKSSITTPLL 382

Required for secondary wall formation in fibers, especially in short days conditions. Promotes indole metabolism and transport (e.g. tryptophan, neoglucobrassicin and auxin (indole-3-acetic acid)). May prevent salicylic-acid (SA) accumulation.
Arabidopsis thaliana (taxid: 3702)

>sp|F4J9A3|WTR26_ARATH WAT1-related protein At3g53210 OS=Arabidopsis thaliana GN=At3g53210 PE=2 SV=1

 Score =  464 bits (1194), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 227/367 (61%), Positives = 288/367 (78%), Gaps = 12/367 (3%)

Query: 2   VPERAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKK 61
           +PERAKLH+AM +FQ GYAGNHVIMR ALN+GVSKLVFPLYR I+A  VL P AYFLEKK
Sbjct: 4   IPERAKLHIAMVVFQTGYAGNHVIMRYALNLGVSKLVFPLYRTIVAFSVLAPSAYFLEKK 63

Query: 62  DRPTLTYSFLLQFFLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRI 121
           +RP +  SFL+QFFLLGLVGITLNQG YIFGLDNTSP FASA EN VPAV+F+MA LL I
Sbjct: 64  ERPAMKISFLIQFFLLGLVGITLNQGFYIFGLDNTSPTFASATENVVPAVSFLMAALLGI 123

Query: 122 EQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQSQSQMLLLGDTKEKNW 181
           E++   RKDGIAKV+GT++SV G+ VITLYKGP +Y+P S +  +Q+      + + KNW
Sbjct: 124 EKVEWKRKDGIAKVVGTIVSVAGSLVITLYKGPTIYQP-SLNIVNQTIKPEEAEEENKNW 182

Query: 182 TLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAW 241
           TLGC+CL+GHCL WSSWIVLQSP+LKKYPAR S VSYSCFF+++QF  I AYFERD   W
Sbjct: 183 TLGCLCLMGHCLCWSSWIVLQSPLLKKYPARFSFVSYSCFFAVIQFFGISAYFERDLERW 242

Query: 242 QFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEE 301
           +  SG E++ + Y+GLV SAM FA+QI+V++RGGP+FVSAYLP+QT++ A++AT+ALGE 
Sbjct: 243 KIISGGELYALLYTGLVGSAMVFAIQIYVVERGGPLFVSAYLPLQTLIAAVLATLALGEH 302

Query: 302 FYLGGVIGASLIIAGLYLVVLGKDEESKY--NTEKAMITVSENTWA---------AKSSV 350
           FYLGG+IGA LI++GLYLVV+GK  E++     ++ MI+ + + +           +S +
Sbjct: 303 FYLGGLIGAILIMSGLYLVVMGKSWENQALCQQQQHMISSAASDFGDEEDYHNNKPRSPI 362

Query: 351 VQPLLPT 357
            QPL+ +
Sbjct: 363 SQPLISS 369

Arabidopsis thaliana (taxid: 3702)

>sp|Q6J163|5NG4_PINTA Auxin-induced protein 5NG4 OS=Pinus taeda PE=2 SV=1

 Score =  400 bits (1027), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 197/345 (57%), Positives = 255/345 (73%), Gaps = 6/345 (1%)

Query: 4   ERAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDR 63
           ER KLH AM   QFGYAG H++ R ALNMGVSK+VFP+YRNI+A++++ P AYFLEKK+R
Sbjct: 15  ERVKLHAAMLALQFGYAGFHIVSRAALNMGVSKVVFPVYRNILALMLIGPCAYFLEKKER 74

Query: 64  PTLTYSFLLQFFLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQ 123
           P LT SFL+QFFLL L GIT         +    P FASA++N+VPA+TFIMA  LR+E+
Sbjct: 75  PALTLSFLIQFFLLALCGITGQSRILSLRIVLHIPTFASAIQNSVPAITFIMAAALRLEK 134

Query: 124 IHLTRKDGIAKVLGTLISVGGASVITLYKGPIV---YRPNSASDQSQSQMLLLGD--TKE 178
           +H++R+DG+AK++GT+  V GA++ITLYKGP +   +RPN     S  +     D   K 
Sbjct: 135 VHISRRDGLAKIIGTVACVSGATIITLYKGPPITHIWRPNLEVTASYFKAFQGNDLSAKS 194

Query: 179 KNWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDS 238
           +NWTLGCI L+G+CL WS WIVLQ+PVLK+YPARLSV S++CFF ++QF  I A+FE D 
Sbjct: 195 ENWTLGCIYLLGNCLAWSGWIVLQAPVLKRYPARLSVTSFTCFFGVIQFLIIAAFFETDL 254

Query: 239 AAWQFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIAL 298
             W+ HSG E+F + Y+G VAS ++F+VQIW IDRGGP+FV+ Y PVQT+ VAIMA+I L
Sbjct: 255 EHWKIHSGGELFTILYAGFVASGIAFSVQIWCIDRGGPVFVAVYQPVQTIAVAIMASIIL 314

Query: 299 GEEFYLGGVIGASLIIAGLYLVVLGKDEESKYNTEKAMIT-VSEN 342
           GE+FYLGG+ GA LII GLYLV+ GK EE +    +A  + V EN
Sbjct: 315 GEQFYLGGIFGAILIIIGLYLVLWGKSEEKRLGLLQAKSSMVPEN 359

Pinus taeda (taxid: 3352)

>sp|Q9LV20|WTR17_ARATH WAT1-related protein At3g18200 OS=Arabidopsis thaliana GN=At3g18200 PE=2 SV=1

 Score =  344 bits (883), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 165/335 (49%), Positives = 239/335 (71%), Gaps = 4/335 (1%)

Query: 1   MVPERAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEK 60
           +V E+ KL +A+   QF +AG H++ R ALN+GVSK+V+P+YRN++A++++ PFAYF EK
Sbjct: 28  VVSEKVKLVVALITLQFCFAGFHIVSRVALNIGVSKVVYPVYRNLLALLLIGPFAYFFEK 87

Query: 61  KDRPTLTYSFLLQFFLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLR 120
           K+RP LT S L QFF L L+GIT NQG Y+ GL   +P FASA++N+VPA+TFIMA  LR
Sbjct: 88  KERPPLTISLLAQFFFLALIGITANQGFYLLGLYYATPTFASAMQNSVPAITFIMACALR 147

Query: 121 IEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQSQSQMLLLGDTKEKN 180
           +E I L RK G+AKVLGTL+S+GGA+VITLY+G  ++       + +    ++G     +
Sbjct: 148 LEHIDLVRKHGVAKVLGTLVSIGGATVITLYRGFPIFDQGLNMQKEE----VVGSDNSHS 203

Query: 181 WTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAA 240
            TLG + L+GHCL W+ W+VLQ+PVLK+YPA+L++ S++CFF L+QF  I  + E D   
Sbjct: 204 LTLGWLYLMGHCLSWAGWMVLQAPVLKQYPAKLTLTSFTCFFGLIQFLVIALFVETDLNN 263

Query: 241 WQFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGE 300
           W   S  E+F + Y+G++AS +   +Q W I + GP+FV+ + P+QT+LVA MA + LG+
Sbjct: 264 WIIVSWEELFTILYAGIIASGLVVYLQTWCIYKSGPVFVAVFQPLQTLLVAAMAFLILGD 323

Query: 301 EFYLGGVIGASLIIAGLYLVVLGKDEESKYNTEKA 335
           + Y GG++GA  I+ GLYLV+ GK+EE K   E++
Sbjct: 324 QLYSGGIVGAVFIMLGLYLVLWGKNEERKLALEES 358

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FL41|WTR38_ARATH WAT1-related protein At5g07050 OS=Arabidopsis thaliana GN=At5g07050 PE=2 SV=1

 Score =  236 bits (602), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 133/332 (40%), Positives = 206/332 (62%), Gaps = 10/332 (3%)

Query: 6   AKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPT 65
           +K + AM   QFGYAG ++I + +LN G+S  V  +YR+ IA  V+ PFA+F E+K +P 
Sbjct: 16  SKPYFAMISLQFGYAGMNIITKISLNTGMSHYVLVVYRHAIATAVIAPFAFFFERKAQPK 75

Query: 66  LTYSFLLQFFLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIH 125
           +T+S  +Q F+LGL+G  ++Q  Y  GL  TSP F+ A+ N +PA+TFI+AVL R+E + 
Sbjct: 76  ITFSIFMQLFILGLLGPVIDQNFYYMGLKYTSPTFSCAMSNMLPAMTFILAVLFRMEMLD 135

Query: 126 LTRKDGIAKVLGTLISVGGASVITLYKGPIV----YRPNSASDQSQSQMLLLGDTKEKNW 181
           L +    AK+ GT+++V GA ++T+YKGPIV     +     D S +      ++     
Sbjct: 136 LKKLWCQAKIAGTVVTVAGAMLMTIYKGPIVELFWTKYMHIQDSSHANTTSSKNSSSDKE 195

Query: 182 TL-GCICLIGHCLFWSSWIVLQSPVLKKYPA-RLSVVSYSCFFSLMQFSAIGAYFERDSA 239
            L G I LI   L W+S  VLQ+ +LK Y   +LS+ +  CF   +Q  A+    E + +
Sbjct: 196 FLKGSILLIFATLAWASLFVLQAKILKTYAKHQLSLTTLICFIGTLQAVAVTFVMEHNPS 255

Query: 240 AWQFHSGWE--IFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIA 297
           AW+   GW+  +    YSG+VAS++S+ VQ  V+ + GP+F +A+ P+  ++VA+M +  
Sbjct: 256 AWRI--GWDMNLLAAAYSGIVASSISYYVQGIVMKKRGPVFATAFSPLMMVIVAVMGSFV 313

Query: 298 LGEEFYLGGVIGASLIIAGLYLVVLGKDEESK 329
           L E+ +LGGVIGA LI+ GLY V+ GK +E++
Sbjct: 314 LAEKIFLGGVIGAVLIVIGLYAVLWGKQKENQ 345

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SUF1|WTR31_ARATH WAT1-related protein At4g08290 OS=Arabidopsis thaliana GN=At4g08290 PE=2 SV=1

 Score =  231 bits (589), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 122/326 (37%), Positives = 197/326 (60%), Gaps = 4/326 (1%)

Query: 4   ERAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDR 63
            + + +L M   QFG AG ++++   LN G ++ V  +YRN++A +VL PFA   E+K R
Sbjct: 9   HKLRPYLLMIFLQFGAAGTYIVIMATLNQGQNRYVVIVYRNLVAALVLAPFALIFERKVR 68

Query: 64  PTLTYSFLLQFFLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQ 123
           P +T S L +   LG +   L+QG    G++ TS  + SA+ N +P+VTFI+A +LR+E+
Sbjct: 69  PKMTLSVLWKIMALGFLEPVLDQGFGYLGMNMTSATYTSAIMNILPSVTFIIAWILRMEK 128

Query: 124 IHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQSQSQMLLLGDTKEKNWTL 183
           +++      AK++GTL+ +GGA V+TLYKGP++  P S  +  Q            NW +
Sbjct: 129 VNIAEVRSKAKIIGTLVGLGGALVMTLYKGPLIPLPWSNPNMDQQNGHTNNSQDHNNWVV 188

Query: 184 GCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQF 243
           G + ++  C+ WS + VLQS  +K YPA LS+ +  C    +Q  A+    ER  + W  
Sbjct: 189 GTLLILLGCVAWSGFYVLQSITIKTYPADLSLSALICLAGAVQSFAVALVVERHPSGWAV 248

Query: 244 HSGWE--IFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEE 301
             GW+  +F   Y+G+V+S +++ VQ  V+   GP+FV+A+ P+  +LVA++A+  L E+
Sbjct: 249 --GWDARLFAPLYTGIVSSGITYYVQGMVMKTRGPVFVTAFNPLCMILVALIASFILHEQ 306

Query: 302 FYLGGVIGASLIIAGLYLVVLGKDEE 327
            + G VIG ++I AGLY+VV GK ++
Sbjct: 307 IHFGCVIGGAVIAAGLYMVVWGKGKD 332

Arabidopsis thaliana (taxid: 3702)

>sp|Q501F8|WTR32_ARATH WAT1-related protein At4g08300 OS=Arabidopsis thaliana GN=At4g08300 PE=2 SV=1

 Score =  226 bits (575), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 121/333 (36%), Positives = 194/333 (58%), Gaps = 3/333 (0%)

Query: 4   ERAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDR 63
           ++ K  +A+   QFGYAG ++I   +   G++  +   YR+++A IV+ PFA  LE+K R
Sbjct: 7   DKLKPIIAIISLQFGYAGMYIITMVSFKHGMNHWILATYRHVVATIVIAPFALILERKIR 66

Query: 64  PTLTYSFLLQFFLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQ 123
           P +T+   L+   LG +   L+Q  Y  G+  TS  ++SA  NA+PA+TFIMAV+ RIE 
Sbjct: 67  PKMTWPLFLRILALGFLEPLLDQNLYYIGMKATSATYSSAFVNALPAITFIMAVIFRIET 126

Query: 124 IHLTRKDGIAKVLGTLISVGGASVITLYKGPIV--YRPNSASDQSQSQMLLLGDTKEKNW 181
           ++L +   +AKV+GT I+VGGA V+TLYKGP +  ++   +S    S      +T ++NW
Sbjct: 127 VNLKKTRSLAKVIGTAITVGGAMVMTLYKGPAIELFKTAHSSLHGGSSG-TSSETTDQNW 185

Query: 182 TLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAW 241
             G + ++G    W+ + +LQS  LKKYPA LS+V + C    +  +       RD +AW
Sbjct: 186 VTGTLAVMGSITTWAGFFILQSFTLKKYPAELSLVMWICAMGTVLNTIASLIMVRDVSAW 245

Query: 242 QFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEE 301
           +           YSG+V S M++ +Q  VI   GP+F +++ P+  ++ A +  + L E+
Sbjct: 246 KVGMDSGTLAAVYSGVVCSGMAYYIQSIVIRERGPVFTTSFSPMCMIITAFLGVLVLAEK 305

Query: 302 FYLGGVIGASLIIAGLYLVVLGKDEESKYNTEK 334
            +LG +IGA  I+ GLY VV GK ++   + E+
Sbjct: 306 IHLGSIIGAIFIVFGLYSVVWGKAKDEVISVEE 338

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M0B8|WTR37_ARATH WAT1-related protein At4g30420 OS=Arabidopsis thaliana GN=At4g30420 PE=3 SV=1

 Score =  224 bits (572), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 132/360 (36%), Positives = 202/360 (56%), Gaps = 17/360 (4%)

Query: 10  LAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYS 69
           +AMT+ Q  YAG  +  R  L  G+S  VF LYR   A I + PF Y   +K +  ++  
Sbjct: 1   MAMTMIQLCYAGVTLFARATLVHGLSPRVFILYRQAFATIFIFPFLYLSRRKSKIAISSL 60

Query: 70  FLLQF---FLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHL 126
            L  F   FL+ L+GIT+NQ  Y+ GL  TS    SAV N +PA+TF+++ L   E+++L
Sbjct: 61  DLKSFSLIFLVSLIGITINQNLYLEGLYLTSSSMGSAVGNIIPAITFLISFLAGYEKLNL 120

Query: 127 TRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQSQSQMLLLGDTKEKN-WTLGC 185
               G+AK+ GT++ V GA  +TL +GP +    SA   ++S   +LG  K++N W +GC
Sbjct: 121 RDIRGLAKIAGTILCVAGAISMTLLRGPKILNSESALPIAKS---VLGHLKDQNTWLIGC 177

Query: 186 ICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQFHS 245
           + L    L WS W++LQ P+   YP  LS+ ++ C F  +Q + +  + E+D  AW  HS
Sbjct: 178 LFLFSSTLCWSFWLILQVPISAYYPDNLSLSAWMCLFGTIQCAVVTFFLEKDPNAWILHS 237

Query: 246 GWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLG 305
             E     Y+G+ ASA+SF VQ W I + GP+F + + P+ T++V I+A +   EE Y G
Sbjct: 238 YSEFATCLYAGIGASALSFTVQAWAIAKRGPVFSALFNPLCTVIVTILAALFFHEEIYTG 297

Query: 306 GVIGASLIIAGLYLVVLGK------DEESKYNTEKAMITV----SENTWAAKSSVVQPLL 355
            +IG   +I GLY V+ GK      +++ + N +K+ + +    S NT      +  PLL
Sbjct: 298 SLIGGLGVILGLYTVLWGKAKDVMMNQDQRDNDQKSEVKIHIEDSSNTTICNKDLKNPLL 357

Arabidopsis thaliana (taxid: 3702)

>sp|F4HZQ7|WTR5_ARATH WAT1-related protein At1g21890 OS=Arabidopsis thaliana GN=At1g21890 PE=2 SV=1

 Score =  224 bits (571), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 122/335 (36%), Positives = 189/335 (56%), Gaps = 7/335 (2%)

Query: 7   KLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTL 66
           K +LAM   QFGYAG ++I   +L  G++  V  +YR+ IA  V+ PFA F E+K RP +
Sbjct: 10  KPYLAMISMQFGYAGMYIITMVSLKHGMNHYVLAVYRHAIATAVIAPFALFHERKIRPKM 69

Query: 67  TYSFLLQFFLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHL 126
           T+   LQ  LLG +   L+Q  Y  G+  TS  FASA  N +PA+TF++A++ R+E ++ 
Sbjct: 70  TFRIFLQIALLGFIEPVLDQNLYYVGMTYTSATFASATANVLPAITFVLAIIFRLESVNF 129

Query: 127 TRKDGIAKVLGTLISVGGASVITLYKGPIV-------YRPNSASDQSQSQMLLLGDTKEK 179
            +   IAKV+GT+I+V GA ++TLYKGPIV            +     S         +K
Sbjct: 130 KKVRSIAKVVGTVITVSGALLMTLYKGPIVDFIRFGGGGGGGSDGAGGSHGGAGAAAMDK 189

Query: 180 NWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSA 239
           +W  G + L+G    W+ + +LQS  LK+YPA LS+ +  C    ++ +A+     RD +
Sbjct: 190 HWIPGTLMLLGRTFGWAGFFILQSFTLKQYPAELSLTTLICLMGTLEGTAVSLVTVRDLS 249

Query: 240 AWQFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALG 299
           AW+      +F   YSG++ S +++ VQ  V+   GP+FV+ + P+  ++ A +  + L 
Sbjct: 250 AWKIGFDSNLFAAAYSGVICSGVAYYVQGVVMRERGPVFVATFNPLCVVITAALGVVVLS 309

Query: 300 EEFYLGGVIGASLIIAGLYLVVLGKDEESKYNTEK 334
           E  +LG VIG   II GLY VV GK ++ +   + 
Sbjct: 310 ESIHLGSVIGTLFIIVGLYTVVWGKGKDKRMTDDD 344

Arabidopsis thaliana (taxid: 3702)

>sp|F4KD68|WTR43_ARATH WAT1-related protein At5g45370 OS=Arabidopsis thaliana GN=At5g45370 PE=2 SV=1

 Score =  223 bits (569), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 129/355 (36%), Positives = 203/355 (57%), Gaps = 20/355 (5%)

Query: 4   ERAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDR 63
           E    H AMT+ Q    G HV+ + ALN+GV++LVF ++R+++A+ +L P A+F E+  R
Sbjct: 16  ETRMAHSAMTLVQVINGGYHVVTKVALNVGVNQLVFCVFRDLLALSILAPLAFFRERTIR 75

Query: 64  PTLTYSFLLQFFLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQ 123
           P +  S     F LGL GI  NQ  ++ GL  T+P +A+A++ ++P  TF++AVL+  E+
Sbjct: 76  PPMNRSIFFSLFFLGLAGIFGNQLLFLMGLSYTNPTYAAAIQPSIPVFTFLLAVLMGTEK 135

Query: 124 IHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQSQSQMLLLGDTKEKN--- 180
           ++L + +G  KV GTL+ V GA  + L++GP ++    A+D  +S +++     E N   
Sbjct: 136 VNLLKVEGQTKVGGTLVCVSGAIAMALFRGPALFGGKDAADSVKS-VIIDRSQPELNGWL 194

Query: 181 -----------WTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFF--SLMQF 227
                      W +G +CLIG+C+  ++++ +Q+PVLKKYPA LSV +YS FF  S+M  
Sbjct: 195 VSSFLGLGFDQWHIGVLCLIGNCMCMAAFLAVQAPVLKKYPAYLSVAAYSYFFGASIMIT 254

Query: 228 SAIGAYFERDSAAWQFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQT 287
           +AI   F R+   W      E+  V ++G+ ASA+++ +  W     G   VS Y P+Q 
Sbjct: 255 TAI--LFVREPKDWSLTQS-EVLAVIFAGVFASALNYGLLTWSNKILGAALVSLYNPLQP 311

Query: 288 MLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLGKDEESKYNTEKAMITVSEN 342
              A ++TI LG   YLG V+G  LII GLY+V      E +  +    I  S +
Sbjct: 312 ATSAFLSTIFLGSPIYLGSVLGGILIICGLYMVTWASYREQQTTSAGNEIASSSD 366

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	361
224097088	367	predicted protein [Populus trichocarpa]	0.977	0.961	0.711	1e-143
225431243	376	PREDICTED: auxin-induced protein 5NG4 [V	0.983	0.944	0.655	1e-139
297735066	365	unnamed protein product [Vitis vinifera]	0.983	0.972	0.655	1e-138
225458125	383	PREDICTED: auxin-induced protein 5NG4-li	0.997	0.939	0.648	1e-138
317106672	384	JHL18I08.9 [Jatropha curcas]	0.997	0.937	0.648	1e-137
255538804	384	Auxin-induced protein 5NG4, putative [Ri	0.997	0.937	0.637	1e-137
224085766	384	mtn21-like protein [Populus trichocarpa]	0.997	0.937	0.648	1e-136
118482147	384	unknown [Populus trichocarpa]	0.997	0.937	0.645	1e-135
356553415	389	PREDICTED: auxin-induced protein 5NG4-li	0.997	0.925	0.621	1e-134
356564327	394	PREDICTED: auxin-induced protein 5NG4-li	0.997	0.913	0.624	1e-133

>gi|224097088|ref|XP_002310832.1| predicted protein [Populus trichocarpa] gi|222853735|gb|EEE91282.1| predicted protein [Populus trichocarpa]

 Score =  514 bits (1324), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 257/361 (71%), Positives = 291/361 (80%), Gaps = 8/361 (2%)

Query: 2   VPERAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKK 61
           V E AKLHLAMTIFQF YAGNHVIMR ALNMGVSKLVFP+YRNIIA+++LVPFAYF+E+K
Sbjct: 4   VSEGAKLHLAMTIFQFVYAGNHVIMRAALNMGVSKLVFPIYRNIIALVLLVPFAYFIERK 63

Query: 62  DRPTLTYSFLLQFFLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRI 121
           DRP LT S L+QFFLLG +GITLNQG Y+FGLDNTSP FASA EN VPAVTFI+A L+R 
Sbjct: 64  DRPPLTLSHLIQFFLLGFLGITLNQGFYLFGLDNTSPSFASATENVVPAVTFILATLIRQ 123

Query: 122 EQI---HLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQSQSQMLLLGDTKE 178
           E I   HL R+DGIAKVLGTL S  GASVITLYKGPI+Y PN  SDQS   M  LGD KE
Sbjct: 124 EHIAYLHLNRRDGIAKVLGTLTSFIGASVITLYKGPIIYSPNPPSDQSD-LMFALGDAKE 182

Query: 179 KNWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDS 238
           KNWTLGCIC  GHCL W+SWIVLQ+ VLKKYPAR SV S++CFFS++QF AI  YFERDS
Sbjct: 183 KNWTLGCICCFGHCLCWASWIVLQAVVLKKYPARFSVYSFTCFFSILQFLAIAGYFERDS 242

Query: 239 AAWQFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIAL 298
            AW  HS  E+F +FY+GLV S + FA+QIWVI R GP+FVS YLP+QTMLVA+MA+IAL
Sbjct: 243 QAWHVHSVGELFTIFYAGLVVSGIGFAIQIWVIQRRGPVFVSGYLPLQTMLVAVMASIAL 302

Query: 299 GEEFYLGGVIGASLIIAGLYLVVLGKDEESKYNTEKAMITVSENT----WAAKSSVVQPL 354
            EEFYLGG+IGA LIIAGLYLVV GK EE+K  T K  I +S +     +  KSS+VQPL
Sbjct: 303 SEEFYLGGMIGAMLIIAGLYLVVWGKSEETKLATAKDAIMLSSDDSQARFPGKSSLVQPL 362

Query: 355 L 355
           L
Sbjct: 363 L 363

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225431243|ref|XP_002267729.1| PREDICTED: auxin-induced protein 5NG4 [Vitis vinifera] gi|147827386|emb|CAN68618.1| hypothetical protein VITISV_000453 [Vitis vinifera]

 Score =  499 bits (1285), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 236/360 (65%), Positives = 293/360 (81%), Gaps = 5/360 (1%)

Query: 2   VPERAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKK 61
           VP+RA LH+AM +FQF YAGNHVI+RTALNMG+SKLVFP YRNIIA+ ++ PFAYFLEKK
Sbjct: 15  VPDRANLHIAMNVFQFVYAGNHVILRTALNMGISKLVFPAYRNIIALAMIAPFAYFLEKK 74

Query: 62  DRPTLTYSFLLQFFLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRI 121
           DRP LT SFL+QFFLL  VGIT NQG Y+ GLDNTSP  ASA ENAVPAVTF+MA +LRI
Sbjct: 75  DRPALTASFLVQFFLLAFVGITANQGFYLLGLDNTSPTLASATENAVPAVTFLMAAILRI 134

Query: 122 EQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQSQSQMLLLGDTKEKNW 181
           E++HL R+DG AKVLGT+ SV GAS+IT+YKGPI++RP+   +QS    + LGD + KNW
Sbjct: 135 EEVHLNRRDGKAKVLGTICSVAGASIITIYKGPIIFRPSHPLNQSLPS-ISLGDAEGKNW 193

Query: 182 TLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAW 241
           TLGC+CLIGHC+ WS WIVLQ+P+LKKYPA+LSV S++CFF+++QF A+    ER+S AW
Sbjct: 194 TLGCVCLIGHCICWSGWIVLQAPILKKYPAQLSVSSFTCFFAILQFLAVAGLIERNSQAW 253

Query: 242 QFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEE 301
            FHS  E+FCV YSG V S + F++Q+W + + GP+FVSAYLP+QT+LVA+MA++ALGE 
Sbjct: 254 LFHSRTELFCVLYSGAVVSGIGFSIQLWAVGKAGPVFVSAYLPLQTLLVAVMASLALGER 313

Query: 302 FYLGGVIGASLIIAGLYLVVLGKDEESKYNTEKAMI-TVSE---NTWAAKSSVVQPLLPT 357
           FYLGGV+GA LI+ GLYLVV GK EE K+ + KA+I +V+E   +T   KSSV QPLLPT
Sbjct: 314 FYLGGVLGAVLILVGLYLVVWGKSEEGKFASRKAVIPSVAESSPSTNNRKSSVFQPLLPT 373

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297735066|emb|CBI17428.3| unnamed protein product [Vitis vinifera]

 Score =  498 bits (1283), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 236/360 (65%), Positives = 293/360 (81%), Gaps = 5/360 (1%)

Query: 2   VPERAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKK 61
           VP+RA LH+AM +FQF YAGNHVI+RTALNMG+SKLVFP YRNIIA+ ++ PFAYFLEKK
Sbjct: 4   VPDRANLHIAMNVFQFVYAGNHVILRTALNMGISKLVFPAYRNIIALAMIAPFAYFLEKK 63

Query: 62  DRPTLTYSFLLQFFLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRI 121
           DRP LT SFL+QFFLL  VGIT NQG Y+ GLDNTSP  ASA ENAVPAVTF+MA +LRI
Sbjct: 64  DRPALTASFLVQFFLLAFVGITANQGFYLLGLDNTSPTLASATENAVPAVTFLMAAILRI 123

Query: 122 EQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQSQSQMLLLGDTKEKNW 181
           E++HL R+DG AKVLGT+ SV GAS+IT+YKGPI++RP+   +QS    + LGD + KNW
Sbjct: 124 EEVHLNRRDGKAKVLGTICSVAGASIITIYKGPIIFRPSHPLNQSLPS-ISLGDAEGKNW 182

Query: 182 TLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAW 241
           TLGC+CLIGHC+ WS WIVLQ+P+LKKYPA+LSV S++CFF+++QF A+    ER+S AW
Sbjct: 183 TLGCVCLIGHCICWSGWIVLQAPILKKYPAQLSVSSFTCFFAILQFLAVAGLIERNSQAW 242

Query: 242 QFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEE 301
            FHS  E+FCV YSG V S + F++Q+W + + GP+FVSAYLP+QT+LVA+MA++ALGE 
Sbjct: 243 LFHSRTELFCVLYSGAVVSGIGFSIQLWAVGKAGPVFVSAYLPLQTLLVAVMASLALGER 302

Query: 302 FYLGGVIGASLIIAGLYLVVLGKDEESKYNTEKAMI-TVSE---NTWAAKSSVVQPLLPT 357
           FYLGGV+GA LI+ GLYLVV GK EE K+ + KA+I +V+E   +T   KSSV QPLLPT
Sbjct: 303 FYLGGVLGAVLILVGLYLVVWGKSEEGKFASRKAVIPSVAESSPSTNNRKSSVFQPLLPT 362

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225458125|ref|XP_002280062.1| PREDICTED: auxin-induced protein 5NG4-like [Vitis vinifera]

 Score =  496 bits (1276), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 238/367 (64%), Positives = 293/367 (79%), Gaps = 7/367 (1%)

Query: 2   VPERAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKK 61
           VPER +LHLAM   QFGYAG HV+ R ALNMG+SKLVFP+YRNIIA+++L PFAYFLEKK
Sbjct: 16  VPERVQLHLAMLALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIALLLLAPFAYFLEKK 75

Query: 62  DRPTLTYSFLLQFFLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRI 121
           +RP LT SF++QFFLL LVGIT NQG Y+ GLDNTSP FASA++N+VPA+TF+MA +LRI
Sbjct: 76  ERPALTLSFVVQFFLLALVGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAAVLRI 135

Query: 122 EQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQSQSQMLLLGDTKEKNW 181
           EQ+ L RKDG+AKVLGT++ V GASVITLYKGP +Y P++  D +    L LGD K KNW
Sbjct: 136 EQVRLNRKDGLAKVLGTILCVAGASVITLYKGPTIYSPSTRPDNTPPLFLSLGDAKGKNW 195

Query: 182 TLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAW 241
           TLGC+ LIGHCL WS+W+VLQ+PVLKKYPARLSV SY+CFF L+QF  I    ER+S AW
Sbjct: 196 TLGCVYLIGHCLSWSAWLVLQAPVLKKYPARLSVTSYTCFFGLIQFLIIALVIERNSQAW 255

Query: 242 QFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEE 301
             HSG E+F VFY+G+VAS ++FAVQIW IDRGGP+FV+ Y PVQT++VAIMA++ALGEE
Sbjct: 256 LIHSGAELFSVFYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASVALGEE 315

Query: 302 FYLGGVIGASLIIAGLYLVVLGKDEESKYNTEK--AMITVSEN-----TWAAKSSVVQPL 354
           FYLGG+IGA LII+GLY V+ GK EE K+  ++  A+ + +E+     +   KSS+ QPL
Sbjct: 316 FYLGGIIGAVLIISGLYFVLWGKSEEKKFAAKEKVAIPSTAEHGNVRTSSHIKSSLTQPL 375

Query: 355 LPTINES 361
           LP   ES
Sbjct: 376 LPPSTES 382

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|317106672|dbj|BAJ53175.1| JHL18I08.9 [Jatropha curcas]

 Score =  493 bits (1269), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 238/367 (64%), Positives = 287/367 (78%), Gaps = 7/367 (1%)

Query: 2   VPERAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKK 61
           VPER +LHLAM   QFGYAG HV+ R ALNMGVSKLVFP+YRNIIA ++LVPFAYFLEKK
Sbjct: 17  VPERFQLHLAMLALQFGYAGFHVVSRAALNMGVSKLVFPVYRNIIAFLLLVPFAYFLEKK 76

Query: 62  DRPTLTYSFLLQFFLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRI 121
           +RP +T +FL+QFFLL LVGIT NQG Y+ GLDNTSP FASA++N+VPA+TF+MA LLRI
Sbjct: 77  ERPAITLNFLIQFFLLALVGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAALLRI 136

Query: 122 EQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQSQSQMLLLGDTKEKNW 181
           E++ L RKDGIAKVLGT+  V GASVITLYKGP++Y P  +  +     + LGD K KNW
Sbjct: 137 EKVRLNRKDGIAKVLGTIFCVAGASVITLYKGPVIYDPAPSLHRPTPMFVSLGDAKGKNW 196

Query: 182 TLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAW 241
           TLGCI LIGHCL WS W+VLQ+PVLKKYPARLSV SY+CFF L+QF  I A+ ERD  AW
Sbjct: 197 TLGCIYLIGHCLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGLIQFLIIAAFMERDPQAW 256

Query: 242 QFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEE 301
            FHSG E+F + Y+G+VAS ++FAVQIW IDRGGP+FV+ Y PVQT++VAIMA+IAL EE
Sbjct: 257 IFHSGGELFTILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASIALAEE 316

Query: 302 FYLGGVIGASLIIAGLYLVVLGKDEESKYNTEKAMITVSENTWAA-------KSSVVQPL 354
           FYLGG+IGA LII GLYLV+ GK EE K+  +++ +  S    A        K+S+ QPL
Sbjct: 317 FYLGGIIGAVLIIVGLYLVLWGKSEEKKFAAKESAVIQSTPEHANLRSQAHIKTSLTQPL 376

Query: 355 LPTINES 361
           LP   E+
Sbjct: 377 LPPSTEN 383

Source: Jatropha curcas

Species: Jatropha curcas

Genus: Jatropha

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255538804|ref|XP_002510467.1| Auxin-induced protein 5NG4, putative [Ricinus communis] gi|223551168|gb|EEF52654.1| Auxin-induced protein 5NG4, putative [Ricinus communis]

 Score =  493 bits (1269), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 234/367 (63%), Positives = 291/367 (79%), Gaps = 7/367 (1%)

Query: 2   VPERAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKK 61
           VPER +LH+AM   QFGYAG HV+ R ALNMG+SKLVFP+YRNIIA+++L+PFAYFLEKK
Sbjct: 17  VPERLQLHMAMLTLQFGYAGFHVVSRAALNMGISKLVFPVYRNIIALLLLLPFAYFLEKK 76

Query: 62  DRPTLTYSFLLQFFLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRI 121
           +RP +T +F++QFFLL L+GIT NQG Y+ GLDNTSP FASA++N+VPA+TF+MA LLRI
Sbjct: 77  ERPAITLNFIIQFFLLALIGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAALLRI 136

Query: 122 EQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQSQSQMLLLGDTKEKNW 181
           E++ L RKDGIAKV+GT+  V GASVITLYKGP+VY P    ++     + LGD + KNW
Sbjct: 137 EKVRLDRKDGIAKVIGTICCVAGASVITLYKGPVVYSPVPPLNKPTPMFVSLGDARGKNW 196

Query: 182 TLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAW 241
           TLGCI LIGHCL WS W+VLQ+PVLKKYPARLSV SY+CFF L+QF  I A FERD+ AW
Sbjct: 197 TLGCIYLIGHCLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGLIQFLIIAAIFERDTQAW 256

Query: 242 QFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEE 301
            FHSG E+F + Y+G+VAS ++FAVQIW IDRGGP+FV+ Y PVQT++VAIMA+IALGEE
Sbjct: 257 MFHSGGELFTILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASIALGEE 316

Query: 302 FYLGGVIGASLIIAGLYLVVLGKDEESKYNTEKAMITVSENTWAA-------KSSVVQPL 354
           FYLGG+IGA LII GLYLV+ GK EE K+  +++    S    A+       K+S+ QPL
Sbjct: 317 FYLGGMIGAVLIIIGLYLVLWGKSEEKKFAAKESAAIQSSADHASIRSQAHIKTSLTQPL 376

Query: 355 LPTINES 361
           LP+  E+
Sbjct: 377 LPSSTEN 383

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224085766|ref|XP_002307691.1| mtn21-like protein [Populus trichocarpa] gi|118482873|gb|ABK93351.1| unknown [Populus trichocarpa] gi|222857140|gb|EEE94687.1| mtn21-like protein [Populus trichocarpa]

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 238/367 (64%), Positives = 289/367 (78%), Gaps = 7/367 (1%)

Query: 2   VPERAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKK 61
           VPER +LHLAM   QFGYAG HV+ R ALNMGVSKLVFP+YRNIIA+++L+PFAYFLEKK
Sbjct: 17  VPERFQLHLAMLALQFGYAGFHVVSRAALNMGVSKLVFPVYRNIIALLLLLPFAYFLEKK 76

Query: 62  DRPTLTYSFLLQFFLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRI 121
           +RP LT +F+LQFF L LVGIT NQG Y+ GL+NTSP FASA++N+VPA+TF+MA LLRI
Sbjct: 77  ERPALTLNFVLQFFFLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAALLRI 136

Query: 122 EQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQSQSQMLLLGDTKEKNW 181
           E++ + RKDGIAKVLGT+  V GASVITLY GP+VY P    ++     + LGD + KNW
Sbjct: 137 EKVRINRKDGIAKVLGTICCVAGASVITLYTGPVVYSPAKHLNRPTPMFVSLGDAEAKNW 196

Query: 182 TLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAW 241
           TLGC+ LIGHCL WS W+VLQ+PVLKKYPARLSV SY+CFF L+QF  I A+ ERD  AW
Sbjct: 197 TLGCLYLIGHCLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGLIQFIIIAAFMERDPQAW 256

Query: 242 QFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEE 301
            FHSG E+F + Y+G+VAS ++FAVQIW IDRGGP+FV+ Y PVQT++VAIMA+IALGEE
Sbjct: 257 IFHSGGELFTILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASIALGEE 316

Query: 302 FYLGGVIGASLIIAGLYLVVLGKDEESKY-NTEKAMIT------VSENTWAAKSSVVQPL 354
           FYLGG+IGA LIIAGLYLV+ GK EE K+   EKA I       +S      K+S+ QPL
Sbjct: 317 FYLGGIIGAVLIIAGLYLVLWGKSEEKKFLALEKAAIQAAPEHGISRAQTHIKTSLTQPL 376

Query: 355 LPTINES 361
           LP+  E+
Sbjct: 377 LPSSTEN 383

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118482147|gb|ABK93004.1| unknown [Populus trichocarpa]

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 237/367 (64%), Positives = 288/367 (78%), Gaps = 7/367 (1%)

Query: 2   VPERAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKK 61
           VPER +LHLAM   QFGYAG HV+ R ALNMGVSKLVFP+YRNIIA+++L+PFAYFLEKK
Sbjct: 17  VPERFQLHLAMLALQFGYAGFHVVSRAALNMGVSKLVFPVYRNIIALLLLLPFAYFLEKK 76

Query: 62  DRPTLTYSFLLQFFLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRI 121
           +RP LT +F+LQFF L LVGIT NQG Y+ GL+NTSP FASA++N+VPA+TF+MA LLRI
Sbjct: 77  ERPALTLNFVLQFFFLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAALLRI 136

Query: 122 EQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQSQSQMLLLGDTKEKNW 181
           E++ + RKDGIAKVLGT+  V GASVITLY GP+VY P    ++     + LGD + KNW
Sbjct: 137 EKVRINRKDGIAKVLGTICCVAGASVITLYTGPVVYSPAKHLNRPTPMFVSLGDAEAKNW 196

Query: 182 TLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAW 241
           TLGC+ LIGHCL WS W+VLQ+PVLKKYPARLSV SY+CFF L+QF  I A+ ERD  AW
Sbjct: 197 TLGCLYLIGHCLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGLIQFIIIAAFMERDPQAW 256

Query: 242 QFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEE 301
            FHSG E+F + Y+G+VAS ++FAVQIW I RGGP+FV+ Y PVQT++VAIMA+IALGEE
Sbjct: 257 IFHSGGELFTILYAGVVASGIAFAVQIWCIGRGGPVFVAVYQPVQTLVVAIMASIALGEE 316

Query: 302 FYLGGVIGASLIIAGLYLVVLGKDEESKY-NTEKAMIT------VSENTWAAKSSVVQPL 354
           FYLGG+IGA LIIAGLYLV+ GK EE K+   EKA I       +S      K+S+ QPL
Sbjct: 317 FYLGGIIGAVLIIAGLYLVLWGKSEEKKFLALEKAAIQAAPEHGISRAQTHIKTSLTQPL 376

Query: 355 LPTINES 361
           LP+  E+
Sbjct: 377 LPSSTEN 383

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356553415|ref|XP_003545052.1| PREDICTED: auxin-induced protein 5NG4-like [Glycine max]

 Score =  483 bits (1244), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 232/373 (62%), Positives = 290/373 (77%), Gaps = 13/373 (3%)

Query: 2   VPERAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKK 61
           VPER +LHLAM   QFGYAG HV+ R ALNMGVSKLVFP+YRNIIA+++L+PFAYFLEKK
Sbjct: 16  VPERMQLHLAMLALQFGYAGFHVVSRAALNMGVSKLVFPVYRNIIALLLLLPFAYFLEKK 75

Query: 62  DRPTLTYSFLLQFFLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRI 121
           DRP +T +F+ QFFLL LVGIT NQG Y+ GL+NTSP FASA++N+VPA+TF+MA +LRI
Sbjct: 76  DRPAMTLNFVCQFFLLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAILRI 135

Query: 122 EQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQSQSQM--------LLL 173
           EQ+ L RKDG+ KV GT++ V GA+VITLYKGP +Y P +  + + +++        + L
Sbjct: 136 EQVRLNRKDGLGKVAGTVLCVVGATVITLYKGPTIYSPTTGVNINNTRVTQVFELGSVSL 195

Query: 174 GDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAY 233
           GD K KNWTLGC+ LIGHCL WS W+VLQ+PVLKKYPARLSV SY+CFF L+QF  I   
Sbjct: 196 GDAKGKNWTLGCLYLIGHCLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGLLQFLVIALL 255

Query: 234 FERDSAAWQFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIM 293
            ERD+ AW FHSG E F + Y+G+VAS ++FAVQIW IDRGGP+FV+ Y PVQT +VAIM
Sbjct: 256 LERDAQAWLFHSGGEAFTILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTFVVAIM 315

Query: 294 ATIALGEEFYLGGVIGASLIIAGLYLVVLGKDEESKYNTEKAMITVSENTW-----AAKS 348
           A+IALGEEFYLGG+IGA LI+AGLYLV+ GK EE K+  E+  I  +E++       AK+
Sbjct: 316 ASIALGEEFYLGGIIGAVLIVAGLYLVLWGKSEERKFAREQLAIASTEHSIIRPASHAKA 375

Query: 349 SVVQPLLPTINES 361
           S+ QPLL +  E+
Sbjct: 376 SLAQPLLSSSTEN 388

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356564327|ref|XP_003550406.1| PREDICTED: auxin-induced protein 5NG4-like [Glycine max]

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 236/378 (62%), Positives = 291/378 (76%), Gaps = 18/378 (4%)

Query: 2   VPERAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKK 61
           VPER +LHLAM   QFGYAG HVI R ALNMGVSKLVFP+YRNIIA+++L+PFAYFLEKK
Sbjct: 16  VPERMQLHLAMLALQFGYAGFHVISRAALNMGVSKLVFPVYRNIIALLLLLPFAYFLEKK 75

Query: 62  DRPTLTYSFLLQFFLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRI 121
           +RP +T +F+ QFFLL LVGIT NQG Y+ GLDNTSP FASA++N+VPA+TF+MAV+LRI
Sbjct: 76  ERPAMTLNFVGQFFLLALVGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAVILRI 135

Query: 122 EQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQS----QSQM------- 170
           EQ+ L RKDG+AKV GT++ V GA+VITLYKGP +Y P +  + S    +S         
Sbjct: 136 EQVRLNRKDGLAKVAGTVLCVAGATVITLYKGPTIYSPTTRVNNSMIMNRSNTTVITPMF 195

Query: 171 ----LLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQ 226
               L LGD K KNWTLGC+ LIGHCL WS W+VLQ+PVLKKYPARLSV SY+CFF ++Q
Sbjct: 196 DFGSLSLGDAKGKNWTLGCLYLIGHCLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGILQ 255

Query: 227 FSAIGAYFERDSAAWQFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQ 286
           F  I    ERD+ AW FHS  E+F + Y+G+VAS ++FAVQIW IDRGGP+FV+ Y PVQ
Sbjct: 256 FLVIALLLERDAQAWLFHSAGEVFTILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQ 315

Query: 287 TMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLGKDEESKYNTEK-AMITVSENTWA 345
           T +VAIMA+IALGEEFYLGG+IGA LI+AGLY V+ GK EE K+  E+ AM +   N+ A
Sbjct: 316 TFVVAIMASIALGEEFYLGGIIGAVLIVAGLYFVLWGKSEERKFAMEQLAMASTEHNSIA 375

Query: 346 A--KSSVVQPLLPTINES 361
           +  K+S+ QPLL +  E+
Sbjct: 376 SHVKASLAQPLLSSSTEN 393

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	361
TAIR|locus:2005689	389	WAT1 "Walls Are Thin 1" [Arabi	0.975	0.904	0.603	3.4e-116
TAIR|locus:2102028	369	UMAMIT6 "Usually multiple acid	0.905	0.886	0.646	1.2e-113
UNIPROTKB|Q6J163	410	Q6J163 "Auxin-induced protein	0.939	0.826	0.547	1.2e-97
TAIR|locus:2092702	383	UMAMIT4 "AT3G18200" [Arabidops	0.916	0.864	0.477	2.1e-84
TAIR|locus:2169414	402	UMAMIT9 "Usually multiple acid	0.891	0.800	0.385	2.2e-57
TAIR|locus:2132447	384	UMAMIT20 "Usually multiple aci	0.878	0.825	0.370	2.5e-56
TAIR|locus:2118686	373	UMAMIT34 "AT4G30420" [Arabidop	0.950	0.919	0.355	2.9e-55
TAIR|locus:2132457	373	UMAMIT17 "Usually multiple aci	0.916	0.887	0.355	3.7e-55
TAIR|locus:2201148	389	UMAMIT19 "Usually multiple aci	0.894	0.830	0.363	3.4e-54
TAIR|locus:2077162	385	UMAMIT3 "Usually multiple acid	0.927	0.870	0.365	7e-54

TAIR|locus:2005689 WAT1 "Walls Are Thin 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1145 (408.1 bits), Expect = 3.4e-116, P = 3.4e-116
 Identities = 224/371 (60%), Positives = 278/371 (74%)

Query:     2 VPERAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKK 61
             VPE+ +LH+AM   QFGYAG HV+ R ALNMG+SKLVFP+YRNIIA+++L+PFAYFLEKK
Sbjct:    14 VPEKLQLHIAMLTLQFGYAGFHVVSRAALNMGISKLVFPVYRNIIALLLLLPFAYFLEKK 73

Query:    62 DRPTLTYSXXXXXXXXXXVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRI 121
             +RP +T +          +GIT NQG Y+ GLDNTSP FAS+++N+VPA+TF+MA LLRI
Sbjct:    74 ERPAITLNFLIQFFFLALIGITANQGFYLLGLDNTSPTFASSMQNSVPAITFLMAALLRI 133

Query:   122 EQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQ----SQSQMLL-LGDT 176
             E++ + R+DGI+K+LGT + V GASVITLYKGP +Y P S        + S +L  LG+ 
Sbjct:   134 EKVRINRRDGISKILGTALCVAGASVITLYKGPTIYTPASHLHAHLLTTNSAVLAPLGNA 193

Query:   177 KEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFER 236
               KNWTLGCI LIGHCL WS W+V Q+PVLK YPARLSV SY+CFF ++QF  I A+ ER
Sbjct:   194 APKNWTLGCIYLIGHCLSWSGWLVFQAPVLKSYPARLSVTSYTCFFGIIQFLIIAAFCER 253

Query:   237 DSAAWQFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATI 296
             DS AW FHSGWE+F + Y+G+VAS ++FAVQIW IDRGGP+FV+ Y PVQT++VAIMA+I
Sbjct:   254 DSQAWVFHSGWELFTILYAGIVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASI 313

Query:   297 ALGEEFYLGGVIGASLIIAGLYLVVLGKDEESKYNT-EKAMIT-----------VSENTW 344
             ALGEEFYLGG+IGA LIIAGLY V+ GK EE K+   EKA I            VS N+ 
Sbjct:   314 ALGEEFYLGGIIGAVLIIAGLYFVLYGKSEERKFAALEKAAIQSSAEHGIERAPVSRNS- 372

Query:   345 AAKSSVVQPLL 355
               KSS+  PLL
Sbjct:   373 -IKSSITTPLL 382

GO:0016020 "membrane" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0009705 "plant-type vacuole membrane" evidence=IDA

GO:0009826 "unidimensional cell growth" evidence=IMP

GO:0009834 "secondary cell wall biogenesis" evidence=IMP

GO:0090355 "positive regulation of auxin metabolic process" evidence=IMP

GO:0090358 "positive regulation of tryptophan metabolic process" evidence=IMP

GO:0000271 "polysaccharide biosynthetic process" evidence=RCA

GO:0006833 "water transport" evidence=RCA

GO:0007389 "pattern specification process" evidence=RCA

GO:0008361 "regulation of cell size" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=RCA

GO:0009926 "auxin polar transport" evidence=RCA

GO:0009932 "cell tip growth" evidence=RCA

GO:0010015 "root morphogenesis" evidence=RCA

GO:0010075 "regulation of meristem growth" evidence=RCA

GO:0010817 "regulation of hormone levels" evidence=RCA

GO:0040007 "growth" evidence=RCA

GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

TAIR|locus:2102028 UMAMIT6 "Usually multiple acids move in and out Transporters 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 1121 (399.7 bits), Expect = 1.2e-113, P = 1.2e-113
 Identities = 212/328 (64%), Positives = 262/328 (79%)

Query:     2 VPERAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKK 61
             +PERAKLH+AM +FQ GYAGNHVIMR ALN+GVSKLVFPLYR I+A  VL P AYFLEKK
Sbjct:     4 IPERAKLHIAMVVFQTGYAGNHVIMRYALNLGVSKLVFPLYRTIVAFSVLAPSAYFLEKK 63

Query:    62 DRPTLTYSXXXXXXXXXXVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRI 121
             +RP +  S          VGITLNQG YIFGLDNTSP FASA EN VPAV+F+MA LL I
Sbjct:    64 ERPAMKISFLIQFFLLGLVGITLNQGFYIFGLDNTSPTFASATENVVPAVSFLMAALLGI 123

Query:   122 EQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQSQSQMLLLGDTKEKNW 181
             E++   RKDGIAKV+GT++SV G+ VITLYKGP +Y+P S +  +Q+      + + KNW
Sbjct:   124 EKVEWKRKDGIAKVVGTIVSVAGSLVITLYKGPTIYQP-SLNIVNQTIKPEEAEEENKNW 182

Query:   182 TLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAW 241
             TLGC+CL+GHCL WSSWIVLQSP+LKKYPAR S VSYSCFF+++QF  I AYFERD   W
Sbjct:   183 TLGCLCLMGHCLCWSSWIVLQSPLLKKYPARFSFVSYSCFFAVIQFFGISAYFERDLERW 242

Query:   242 QFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEE 301
             +  SG E++ + Y+GLV SAM FA+QI+V++RGGP+FVSAYLP+QT++ A++AT+ALGE 
Sbjct:   243 KIISGGELYALLYTGLVGSAMVFAIQIYVVERGGPLFVSAYLPLQTLIAAVLATLALGEH 302

Query:   302 FYLGGVIGASLIIAGLYLVVLGKDEESK 329
             FYLGG+IGA LI++GLYLVV+GK  E++
Sbjct:   303 FYLGGLIGAILIMSGLYLVVMGKSWENQ 330

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

GO:0009062 "fatty acid catabolic process" evidence=RCA

UNIPROTKB|Q6J163 Q6J163 "Auxin-induced protein 5NG4" [Pinus taeda (taxid:3352)]

 Score = 970 (346.5 bits), Expect = 1.2e-97, P = 1.2e-97
 Identities = 189/345 (54%), Positives = 246/345 (71%)

Query:     4 ERAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDR 63
             ER KLH AM   QFGYAG H++ R ALNMGVSK+VFP+YRNI+A++++ P AYFLEKK+R
Sbjct:    15 ERVKLHAAMLALQFGYAGFHIVSRAALNMGVSKVVFPVYRNILALMLIGPCAYFLEKKER 74

Query:    64 PTLTYSXXXXXXXXXXVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQ 123
             P LT S           GIT         +    P FASA++N+VPA+TFIMA  LR+E+
Sbjct:    75 PALTLSFLIQFFLLALCGITGQSRILSLRIVLHIPTFASAIQNSVPAITFIMAAALRLEK 134

Query:   124 IHLTRKDGIAKVLGTLISVGGASVITLYKGPIV---YRPNSASDQSQSQMLLLGD--TKE 178
             +H++R+DG+AK++GT+  V GA++ITLYKGP +   +RPN     S  +     D   K 
Sbjct:   135 VHISRRDGLAKIIGTVACVSGATIITLYKGPPITHIWRPNLEVTASYFKAFQGNDLSAKS 194

Query:   179 KNWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDS 238
             +NWTLGCI L+G+CL WS WIVLQ+PVLK+YPARLSV S++CFF ++QF  I A+FE D 
Sbjct:   195 ENWTLGCIYLLGNCLAWSGWIVLQAPVLKRYPARLSVTSFTCFFGVIQFLIIAAFFETDL 254

Query:   239 AAWQFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIAL 298
               W+ HSG E+F + Y+G VAS ++F+VQIW IDRGGP+FV+ Y PVQT+ VAIMA+I L
Sbjct:   255 EHWKIHSGGELFTILYAGFVASGIAFSVQIWCIDRGGPVFVAVYQPVQTIAVAIMASIIL 314

Query:   299 GEEFYLGGVIGASLIIAGLYLVVLGKDEESKYNTEKAMIT-VSEN 342
             GE+FYLGG+ GA LII GLYLV+ GK EE +    +A  + V EN
Sbjct:   315 GEQFYLGGIFGAILIIIGLYLVLWGKSEEKRLGLLQAKSSMVPEN 359

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=IDA

GO:0005887 "integral to plasma membrane" evidence=NAS

GO:0005938 "cell cortex" evidence=IDA

GO:0006810 "transport" evidence=NAS

GO:0009734 "auxin mediated signaling pathway" evidence=IDA

TAIR|locus:2092702 UMAMIT4 "AT3G18200" [Arabidopsis thaliana (taxid:3702)]

 Score = 845 (302.5 bits), Expect = 2.1e-84, P = 2.1e-84
 Identities = 160/335 (47%), Positives = 234/335 (69%)

Query:     1 MVPERAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEK 60
             +V E+ KL +A+   QF +AG H++ R ALN+GVSK+V+P+YRN++A++++ PFAYF EK
Sbjct:    28 VVSEKVKLVVALITLQFCFAGFHIVSRVALNIGVSKVVYPVYRNLLALLLIGPFAYFFEK 87

Query:    61 KDRPTLTYSXXXXXXXXXXVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLR 120
             K+RP LT S          +GIT NQG Y+ GL   +P FASA++N+VPA+TFIMA  LR
Sbjct:    88 KERPPLTISLLAQFFFLALIGITANQGFYLLGLYYATPTFASAMQNSVPAITFIMACALR 147

Query:   121 IEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQSQSQMLLLGDTKEKN 180
             +E I L RK G+AKVLGTL+S+GGA+VITLY+G  ++     + Q +    ++G     +
Sbjct:   148 LEHIDLVRKHGVAKVLGTLVSIGGATVITLYRGFPIF-DQGLNMQKEE---VVGSDNSHS 203

Query:   181 WTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAA 240
              TLG + L+GHCL W+ W+VLQ+PVLK+YPA+L++ S++CFF L+QF  I  + E D   
Sbjct:   204 LTLGWLYLMGHCLSWAGWMVLQAPVLKQYPAKLTLTSFTCFFGLIQFLVIALFVETDLNN 263

Query:   241 WQFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGE 300
             W   S  E+F + Y+G++AS +   +Q W I + GP+FV+ + P+QT+LVA MA + LG+
Sbjct:   264 WIIVSWEELFTILYAGIIASGLVVYLQTWCIYKSGPVFVAVFQPLQTLLVAAMAFLILGD 323

Query:   301 EFYLGGVIGASLIIAGLYLVVLGKDEESKYNTEKA 335
             + Y GG++GA  I+ GLYLV+ GK+EE K   E++
Sbjct:   324 QLYSGGIVGAVFIMLGLYLVLWGKNEERKLALEES 358

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2169414 UMAMIT9 "Usually multiple acids move in and out Transporters 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
 Identities = 128/332 (38%), Positives = 200/332 (60%)

Query:     6 AKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPT 65
             +K + AM   QFGYAG ++I + +LN G+S  V  +YR+ IA  V+ PFA+F E+K +P 
Sbjct:    16 SKPYFAMISLQFGYAGMNIITKISLNTGMSHYVLVVYRHAIATAVIAPFAFFFERKAQPK 75

Query:    66 LTYSXXXXXXXXXXVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIH 125
             +T+S          +G  ++Q  Y  GL  TSP F+ A+ N +PA+TFI+AVL R+E + 
Sbjct:    76 ITFSIFMQLFILGLLGPVIDQNFYYMGLKYTSPTFSCAMSNMLPAMTFILAVLFRMEMLD 135

Query:   126 LTRKDGIAKVLGTLISVGGASVITLYKGPIVY----RPNSASDQSQSQMLLL-GDTKEKN 180
             L +    AK+ GT+++V GA ++T+YKGPIV     +     D S +        + +K 
Sbjct:   136 LKKLWCQAKIAGTVVTVAGAMLMTIYKGPIVELFWTKYMHIQDSSHANTTSSKNSSSDKE 195

Query:   181 WTLGCICLIGHCLFWSSWIVLQSPVLKKYPA-RLSVVSYSCFFSLMQFSAIGAYFERDSA 239
             +  G I LI   L W+S  VLQ+ +LK Y   +LS+ +  CF   +Q  A+    E + +
Sbjct:   196 FLKGSILLIFATLAWASLFVLQAKILKTYAKHQLSLTTLICFIGTLQAVAVTFVMEHNPS 255

Query:   240 AWQFHSGWE--IFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIA 297
             AW+   GW+  +    YSG+VAS++S+ VQ  V+ + GP+F +A+ P+  ++VA+M +  
Sbjct:   256 AWRI--GWDMNLLAAAYSGIVASSISYYVQGIVMKKRGPVFATAFSPLMMVIVAVMGSFV 313

Query:   298 LGEEFYLGGVIGASLIIAGLYLVVLGKDEESK 329
             L E+ +LGGVIGA LI+ GLY V+ GK +E++
Sbjct:   314 LAEKIFLGGVIGAVLIVIGLYAVLWGKQKENQ 345

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2132447 UMAMIT20 "Usually multiple acids move in and out Transporters 20" [Arabidopsis thaliana (taxid:3702)]

 Score = 580 (209.2 bits), Expect = 2.5e-56, P = 2.5e-56
 Identities = 119/321 (37%), Positives = 191/321 (59%)

Query:     9 HLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTY 68
             +L M   QFG AG ++++   LN G ++ V  +YRN++A +VL PFA   E+K RP +T 
Sbjct:    14 YLLMIFLQFGAAGTYIVIMATLNQGQNRYVVIVYRNLVAALVLAPFALIFERKVRPKMTL 73

Query:    69 SXXXXXXXXXXVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTR 128
             S          +   L+QG    G++ TS  + SA+ N +P+VTFI+A +LR+E++++  
Sbjct:    74 SVLWKIMALGFLEPVLDQGFGYLGMNMTSATYTSAIMNILPSVTFIIAWILRMEKVNIAE 133

Query:   129 KDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQSQSQMLLLGDTKEKNWTLGCICL 188
                 AK++GTL+ +GGA V+TLYKGP++  P S  +  Q            NW +G + +
Sbjct:   134 VRSKAKIIGTLVGLGGALVMTLYKGPLIPLPWSNPNMDQQNGHTNNSQDHNNWVVGTLLI 193

Query:   189 IGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQFHSGWE 248
             +  C+ WS + VLQS  +K YPA LS+ +  C    +Q  A+    ER  + W    GW+
Sbjct:   194 LLGCVAWSGFYVLQSITIKTYPADLSLSALICLAGAVQSFAVALVVERHPSGWAV--GWD 251

Query:   249 --IFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGG 306
               +F   Y+G+V+S +++ VQ  V+   GP+FV+A+ P+  +LVA++A+  L E+ + G 
Sbjct:   252 ARLFAPLYTGIVSSGITYYVQGMVMKTRGPVFVTAFNPLCMILVALIASFILHEQIHFGC 311

Query:   307 VIGASLIIAGLYLVVLGKDEE 327
             VIG ++I AGLY+VV GK ++
Sbjct:   312 VIGGAVIAAGLYMVVWGKGKD 332

GO:0005576 "extracellular region" evidence=ISM

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2118686 UMAMIT34 "AT4G30420" [Arabidopsis thaliana (taxid:3702)]

 Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
 Identities = 128/360 (35%), Positives = 196/360 (54%)

Query:    10 LAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDR---PTL 66
             +AMT+ Q  YAG  +  R  L  G+S  VF LYR   A I + PF Y   +K +    +L
Sbjct:     1 MAMTMIQLCYAGVTLFARATLVHGLSPRVFILYRQAFATIFIFPFLYLSRRKSKIAISSL 60

Query:    67 TYSXXXXXXXXXXVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHL 126
                          +GIT+NQ  Y+ GL  TS    SAV N +PA+TF+++ L   E+++L
Sbjct:    61 DLKSFSLIFLVSLIGITINQNLYLEGLYLTSSSMGSAVGNIIPAITFLISFLAGYEKLNL 120

Query:   127 TRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQSQSQMLLLGDTKEKN-WTLGC 185
                 G+AK+ GT++ V GA  +TL +GP +    SA   ++S   +LG  K++N W +GC
Sbjct:   121 RDIRGLAKIAGTILCVAGAISMTLLRGPKILNSESALPIAKS---VLGHLKDQNTWLIGC 177

Query:   186 ICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQFHS 245
             + L    L WS W++LQ P+   YP  LS+ ++ C F  +Q + +  + E+D  AW  HS
Sbjct:   178 LFLFSSTLCWSFWLILQVPISAYYPDNLSLSAWMCLFGTIQCAVVTFFLEKDPNAWILHS 237

Query:   246 GWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLG 305
               E     Y+G+ ASA+SF VQ W I + GP+F + + P+ T++V I+A +   EE Y G
Sbjct:   238 YSEFATCLYAGIGASALSFTVQAWAIAKRGPVFSALFNPLCTVIVTILAALFFHEEIYTG 297

Query:   306 GVIGASLIIAGLYLVVLGK------DEESKYNTEKAMITV----SENTWAAKSSVVQPLL 355
              +IG   +I GLY V+ GK      +++ + N +K+ + +    S NT      +  PLL
Sbjct:   298 SLIGGLGVILGLYTVLWGKAKDVMMNQDQRDNDQKSEVKIHIEDSSNTTICNKDLKNPLL 357

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2132457 UMAMIT17 "Usually multiple acids move in and out Transporters 17" [Arabidopsis thaliana (taxid:3702)]

 Score = 569 (205.4 bits), Expect = 3.7e-55, P = 3.7e-55
 Identities = 118/332 (35%), Positives = 188/332 (56%)

Query:     4 ERAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDR 63
             ++ K  +A+   QFGYAG ++I   +   G++  +   YR+++A IV+ PFA  LE+K R
Sbjct:     7 DKLKPIIAIISLQFGYAGMYIITMVSFKHGMNHWILATYRHVVATIVIAPFALILERKIR 66

Query:    64 PTLTYSXXXXXXXXXXVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQ 123
             P +T+           +   L+Q  Y  G+  TS  ++SA  NA+PA+TFIMAV+ RIE 
Sbjct:    67 PKMTWPLFLRILALGFLEPLLDQNLYYIGMKATSATYSSAFVNALPAITFIMAVIFRIET 126

Query:   124 IHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSA-SDQSQSQMLLLGDTKEKNWT 182
             ++L +   +AKV+GT I+VGGA V+TLYKGP +    +A S           +T ++NW 
Sbjct:   127 VNLKKTRSLAKVIGTAITVGGAMVMTLYKGPAIELFKTAHSSLHGGSSGTSSETTDQNWV 186

Query:   183 LGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQ 242
              G + ++G    W+ + +LQS  LKKYPA LS+V + C    +  +       RD +AW+
Sbjct:   187 TGTLAVMGSITTWAGFFILQSFTLKKYPAELSLVMWICAMGTVLNTIASLIMVRDVSAWK 246

Query:   243 FHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEF 302
                        YSG+V S M++ +Q  VI   GP+F +++ P+  ++ A +  + L E+ 
Sbjct:   247 VGMDSGTLAAVYSGVVCSGMAYYIQSIVIRERGPVFTTSFSPMCMIITAFLGVLVLAEKI 306

Query:   303 YLGGVIGASLIIAGLYLVVLGKDEESKYNTEK 334
             +LG +IGA  I+ GLY VV GK ++   + E+
Sbjct:   307 HLGSIIGAIFIVFGLYSVVWGKAKDEVISVEE 338

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2201148 UMAMIT19 "Usually multiple acids move in and out Transporters 19" [Arabidopsis thaliana (taxid:3702)]

 Score = 560 (202.2 bits), Expect = 3.4e-54, P = 3.4e-54
 Identities = 120/330 (36%), Positives = 186/330 (56%)

Query:     7 KLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTL 66
             K +LAM   QFGYAG ++I   +L  G++  V  +YR+ IA  V+ PFA F E+K RP +
Sbjct:    10 KPYLAMISMQFGYAGMYIITMVSLKHGMNHYVLAVYRHAIATAVIAPFALFHERKIRPKM 69

Query:    67 TYSXXXXXXXXXXVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHL 126
             T+           +   L+Q  Y  G+  TS  FASA  N +PA+TF++A++ R+E ++ 
Sbjct:    70 TFRIFLQIALLGFIEPVLDQNLYYVGMTYTSATFASATANVLPAITFVLAIIFRLESVNF 129

Query:   127 TRKDGIAKVLGTLISVGGASVITLYKGPIV--YR----PNSASDQSQSQMLLLGDTK-EK 179
              +   IAKV+GT+I+V GA ++TLYKGPIV   R        SD +       G    +K
Sbjct:   130 KKVRSIAKVVGTVITVSGALLMTLYKGPIVDFIRFGGGGGGGSDGAGGSHGGAGAAAMDK 189

Query:   180 NWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSA 239
             +W  G + L+G    W+ + +LQS  LK+YPA LS+ +  C    ++ +A+     RD +
Sbjct:   190 HWIPGTLMLLGRTFGWAGFFILQSFTLKQYPAELSLTTLICLMGTLEGTAVSLVTVRDLS 249

Query:   240 AWQFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALG 299
             AW+      +F   YSG++ S +++ VQ  V+   GP+FV+ + P+  ++ A +  + L 
Sbjct:   250 AWKIGFDSNLFAAAYSGVICSGVAYYVQGVVMRERGPVFVATFNPLCVVITAALGVVVLS 309

Query:   300 EEFYLGGVIGASLIIAGLYLVVLGKDEESK 329
             E  +LG VIG   II GLY VV GK ++ +
Sbjct:   310 ESIHLGSVIGTLFIIVGLYTVVWGKGKDKR 339

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2077162 UMAMIT3 "Usually multiple acids move in and out Transporters 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
 Identities = 127/347 (36%), Positives = 196/347 (56%)

Query:     4 ERAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDR 63
             E  K H+AM   Q    G HVI + ALN+GV++LVF ++R++IA+ +L P AY  +K+ R
Sbjct:     8 EAWKAHVAMIGVQLFNGGYHVITKVALNVGVNQLVFCVFRDLIALSILAPLAYIRDKRTR 67

Query:    64 PTLTYSXXXXXXXXXXVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQ 123
             P L              GI  NQ  ++ GL+ T+P +A+A++ ++P  TFI+A+++  E+
Sbjct:    68 PPLNRQFLLAFFFLGLTGIFGNQLLFLIGLNYTNPTYAAAIQPSIPVFTFILALIMGTER 127

Query:   124 IHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASD----QSQ----SQMLLLGD 175
             ++L + +G AKV GTLI V GA ++ L++G  ++    A      +S+    S   + G 
Sbjct:   128 LNLFKLEGQAKVGGTLICVAGAVLMVLFRGLALFGETEAESLGHGESRHTETSGHFMSGF 187

Query:   176 TKEKN-WTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYF 234
                   W LG +CLIG+C   ++++ +Q+PVLKKYPA LSV +YS FF  M F    A+F
Sbjct:   188 FNGLGRWNLGVLCLIGNCTCMAAFLAIQAPVLKKYPANLSVTAYSYFFGTM-FMVTSAFF 246

Query:   235 -ERDSAAWQFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIM 293
                +S  W      E F V Y+G++ASA+++ +  W     GP  V+ Y P+Q    A +
Sbjct:   247 MTNESTNWSLTRS-EFFAVVYAGVIASALNYGLLTWSNKILGPSLVALYNPLQPAASAFL 305

Query:   294 ATIALGEEFYLGGVIGASLIIAGLYLVVLGKDEESKYNTEKAMITVS 340
             + I LG   YLG ++G   IIAGLY V     +E K     A+I ++
Sbjct:   306 SRIFLGSPIYLGSILGGCAIIAGLYSVTWASYKEKKAAAAMAVIPIT 352

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6J163	5NG4_PINTA	No assigned EC number	0.5710	0.9390	0.8268	N/A	no
Q94AP3	WAT1_ARATH	No assigned EC number	0.6226	0.9750	0.9048	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	361
PLN00411	358	PLN00411, PLN00411, nodulin MtN21 family protein;	2e-38
COG0697	292	COG0697, RhaT, Permeases of the drug/metabolite tr	6e-09
pfam00892	126	pfam00892, EamA, EamA-like transporter family	3e-07
pfam00892	126	pfam00892, EamA, EamA-like transporter family	1e-05

>gnl|CDD|177805 PLN00411, PLN00411, nodulin MtN21 family protein; Provisional

 Score =  140 bits (353), Expect = 2e-38
 Identities = 91/322 (28%), Positives = 168/322 (52%), Gaps = 6/322 (1%)

Query: 11  AMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEK-KDRPTLTYS 69
           AM   +    G   + + A + G++   F  Y  ++A ++L+P  +F  + +  P L+ S
Sbjct: 17  AMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVS 76

Query: 70  FLLQFFLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRK 129
            L +  LLG +G       YI G++ ++P  ASA+ N  PA+TFI+A++ R+E++    +
Sbjct: 77  ILSKIGLLGFLGSMYVITGYI-GIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKER 135

Query: 130 DGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQSQSQMLLLGDTKEKNWTLGCICLI 189
             +AKV+GT++S+ GA V+  Y GP V+  +S    +  Q+     +   +W +G   L 
Sbjct: 136 SSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQLSPPLSSSNSDWLIGGALLT 195

Query: 190 GHCLFWSSWIVLQSPVLKKYPARLSV-VSYSCFFSLMQFSAIGAYFERDS-AAWQFHSGW 247
              +F S   +LQ+ ++ +YPA  +V   Y+   S++  S IG   E+++ + W  H   
Sbjct: 196 IQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVT-SMIGLVVEKNNPSVWIIHFDI 254

Query: 248 EIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGV 307
            +  +    ++ S + + +  W +   GP++++ + P+  ++  +M  I L +  YLG +
Sbjct: 255 TLITIVTMAIITS-VYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCL 313

Query: 308 IGASLIIAGLYLVVLGKDEESK 329
           IG  LI  G Y V+ GK  E K
Sbjct: 314 IGGILITLGFYAVMWGKANEEK 335

Length = 358

>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

 Score = 56.0 bits (135), Expect = 6e-09
 Identities = 61/324 (18%), Positives = 123/324 (37%), Gaps = 35/324 (10%)

Query: 1   MVPERAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEK 60
           M        LA+ ++   +  + + ++ A+      L     R +IA ++L+P      +
Sbjct: 1   MKRALLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPR 60

Query: 61  KDRPTLTYSFLLQFFLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLR 120
             RP L     L   LL L+G+ L        L  TS   AS +   +P  T ++AVLL 
Sbjct: 61  GLRPAL--RPWLLLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLL 118

Query: 121 IEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQSQSQMLLLGDTKEKN 180
                L  +  + ++LG L+++ G  +I L                       G      
Sbjct: 119 -----LGERLSLLQILGILLALAGVLLILLG----------------------GGGGGIL 151

Query: 181 WTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAA 240
             LG +  +   L W+ +  L   + +  P  L+++       L+      + F      
Sbjct: 152 SLLGLLLALAAALLWALYTALVKRLSRLGPVTLALLLQLLLALLLLLLFFLSGF------ 205

Query: 241 WQFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGE 300
                      + Y G+ ++ +++ +  + +   G   V+    ++ +  A++  + LGE
Sbjct: 206 GAPILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGE 265

Query: 301 EFYLGGVIGASLIIAGLYLVVLGK 324
                 ++GA+L++ G+ L  L  
Sbjct: 266 PLSPAQLLGAALVVLGVLLASLRA 289

Length = 292

>gnl|CDD|216178 pfam00892, EamA, EamA-like transporter family

 Score = 48.4 bits (116), Expect = 3e-07
 Identities = 25/130 (19%), Positives = 55/130 (42%), Gaps = 4/130 (3%)

Query: 193 LFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQFHSGWEIFCV 252
           L W+ + V    +L++    L+  +Y    + +    +     +  A     S   I  +
Sbjct: 1   LSWALYFVFSKKLLERISP-LTFTAYRFLIAGILLILLLFLLRKPFALL---SLKAILAL 56

Query: 253 FYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASL 312
            Y GL  +A+ + +  + +        S    +  +   I++ + LGE+  L  ++G  L
Sbjct: 57  LYLGLFGTALGYLLYFYALKYVSASNASVITSLSPVFTLILSVLLLGEKLTLKQLLGIVL 116

Query: 313 IIAGLYLVVL 322
           I+ G+ L++L
Sbjct: 117 ILLGVLLILL 126

This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Length = 126

>gnl|CDD|216178 pfam00892, EamA, EamA-like transporter family

 Score = 43.8 bits (104), Expect = 1e-05
 Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 7/109 (6%)

Query: 42  YRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITLNQGSYIFGLDNTSPIFA 101
           YR +IA I+L     FL +K    L+   +L    LGL G  L    Y + L   S   A
Sbjct: 25  YRFLIAGILL-ILLLFLLRKPFALLSLKAILALLYLGLFGTALGYLLYFYALKYVSASNA 83

Query: 102 SAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITL 150
           S + +  P  T I++VLL  E++ L       ++LG ++ + G  +I L
Sbjct: 84  SVITSLSPVFTLILSVLLLGEKLTLK------QLLGIVLILLGVLLILL 126

This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Length = 126

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	361
PLN00411	358	nodulin MtN21 family protein; Provisional	100.0
PRK11272	292	putative DMT superfamily transporter inner membran	100.0
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	100.0
PRK11689	295	aromatic amino acid exporter; Provisional	100.0
PRK10532	293	threonine and homoserine efflux system; Provisiona	100.0
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	100.0
PRK15430	296	putative chloramphenical resistance permease RarD;	100.0
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.97
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.97
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.96
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.96
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.95
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.94
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.92
COG2962	293	RarD Predicted permeases [General function predict	99.92
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.91
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.89
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.85
KOG2765	416	consensus Predicted membrane protein [Function unk	99.82
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.78
KOG2766	336	consensus Predicted membrane protein [Function unk	99.68
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.67
COG2510	140	Predicted membrane protein [Function unknown]	99.63
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.63
KOG1580	337	consensus UDP-galactose transporter related protei	99.61
KOG1581	327	consensus UDP-galactose transporter related protei	99.59
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.58
COG2510	140	Predicted membrane protein [Function unknown]	99.58
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.57
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.53
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.52
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.46
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.34
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	99.3
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.29
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.28
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	99.25
PF13536	113	EmrE: Multidrug resistance efflux transporter	99.23
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	99.22
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.21
KOG1582	367	consensus UDP-galactose transporter related protei	99.18
PRK15430	296	putative chloramphenical resistance permease RarD;	99.13
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.12
PRK13499	345	rhamnose-proton symporter; Provisional	99.1
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.09
PRK11272	292	putative DMT superfamily transporter inner membran	99.07
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	99.06
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.04
PLN00411	358	nodulin MtN21 family protein; Provisional	99.0
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	98.94
PRK11689	295	aromatic amino acid exporter; Provisional	98.94
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.93
KOG2922	335	consensus Uncharacterized conserved protein [Funct	98.88
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.86
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.82
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.77
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.62
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.58
COG2962	293	RarD Predicted permeases [General function predict	98.56
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.56
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.56
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.52
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	98.49
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.45
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.37
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	98.26
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	98.19
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.98
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.96
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.96
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	97.85
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	97.75
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.72
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	97.68
KOG4510	346	consensus Permease of the drug/metabolite transpor	97.66
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.53
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	97.49
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	97.47
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.43
COG2076	106	EmrE Membrane transporters of cations and cationic	97.42
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.4
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.37
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.36
PRK11431	105	multidrug efflux system protein; Provisional	97.36
PRK13499	345	rhamnose-proton symporter; Provisional	97.35
COG2076	106	EmrE Membrane transporters of cations and cationic	97.32
PRK11431	105	multidrug efflux system protein; Provisional	97.24
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	97.23
KOG2765	416	consensus Predicted membrane protein [Function unk	97.06
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	97.05
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	97.03
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.66
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	96.55
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	96.5
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	96.14
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	96.09
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	95.84
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	95.75
KOG2922	335	consensus Uncharacterized conserved protein [Funct	95.69
KOG1581	327	consensus UDP-galactose transporter related protei	95.34
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	95.3
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	94.1
KOG4831	125	consensus Unnamed protein [Function unknown]	93.95
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	93.3
KOG1580	337	consensus UDP-galactose transporter related protei	92.51
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	91.77
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	90.21
PRK02237	109	hypothetical protein; Provisional	87.28
KOG2766	336	consensus Predicted membrane protein [Function unk	86.48
KOG1443	349	consensus Predicted integral membrane protein [Fun	85.35
PF02694	107	UPF0060: Uncharacterised BCR, YnfA/UPF0060 family;	83.5
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	82.36
PF07168	336	Ureide_permease: Ureide permease; InterPro: IPR009	81.83
KOG3912	372	consensus Predicted integral membrane protein [Gen	80.13

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=100.00  E-value=3.8e-38  Score=291.85  Aligned_cols=319  Identities=26%  Similarity=0.528  Sum_probs=246.8

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhc-cCCCCCCHHHHHHHHHHHHHHH
Q 018069            4 ERAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEK-KDRPTLTYSFLLQFFLLGLVGI   82 (361)
Q Consensus         4 ~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~   82 (361)
                      |+.+.++.|++..++++...++.|.+.+.|++|+.+.++|+.++.++++++.++++| +.+++.+++++..+.+.|+++ 
T Consensus        10 ~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g-   88 (358)
T PLN00411         10 REAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLG-   88 (358)
T ss_pred             hccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHH-
Confidence            346799999999999999999999999999999999999999999999999877654 233445678888899999998 


Q ss_pred             HHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCC--
Q 018069           83 TLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPN--  160 (361)
Q Consensus        83 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~--  160 (361)
                      +.++.+++.|++|+++++++++.++.|+++.+++++++.|+.+.++|.++.+++|++++++|+.++...+++.....+  
T Consensus        89 ~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~  168 (358)
T PLN00411         89 SMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSP  168 (358)
T ss_pred             HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCccccccccc
Confidence            578889999999999999999999999999999999953333333334445999999999999998754442110000  


Q ss_pred             CCCcc-cchhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhcCC-c
Q 018069          161 SASDQ-SQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERD-S  238 (361)
Q Consensus       161 ~~~~~-~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~  238 (361)
                      +..+. +. .+  .......+...|+++++.++++||.|++.+|+..+++++....++++...+.+...+.....+.+ .
T Consensus       169 ~~~~~~~~-~~--~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~  245 (358)
T PLN00411        169 PYLNFRQL-SP--PLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNP  245 (358)
T ss_pred             cccccccc-cc--ccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCc
Confidence            00000 00 00  00111234467999999999999999999999999987566667777777766666666654432 2


Q ss_pred             cccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHH
Q 018069          239 AAWQFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLY  318 (361)
Q Consensus       239 ~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~  318 (361)
                      ..+..........+++.+++ +.++|.+|++++++.+|++++++.+++|+++++++++++||++++.+++|+++|+.|++
T Consensus       246 ~~~~~~~~~~~~~i~y~~i~-t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~  324 (358)
T PLN00411        246 SVWIIHFDITLITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFY  324 (358)
T ss_pred             ccceeccchHHHHHHHHHHH-HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHH
Confidence            22221122234557777775 56899999999999999999999999999999999999999999999999999999999


Q ss_pred             Hhhcccccc
Q 018069          319 LVVLGKDEE  327 (361)
Q Consensus       319 l~~~~~~~~  327 (361)
                      +..+.++++
T Consensus       325 l~~~~~~~~  333 (358)
T PLN00411        325 AVMWGKANE  333 (358)
T ss_pred             HHHhhhhhh
Confidence            988755444

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=100.00  E-value=4.6e-33  Score=253.79  Aligned_cols=286  Identities=16%  Similarity=0.168  Sum_probs=236.0

Q ss_pred             CCcchhHH-HHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHH
Q 018069            1 MVPERAKL-HLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGL   79 (361)
Q Consensus         1 m~~~~~~g-~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~   79 (361)
                      |+.|+..+ .+..++..++||.+++..|...++ ++|.+++++|+.++.++++++...++++   ..+++++......|.
T Consensus         1 ~~~~~~~~~~~~~~~~~~iWg~~~~~~K~~~~~-~~p~~~~~~R~~~a~l~ll~~~~~~~~~---~~~~~~~~~~~~~g~   76 (292)
T PRK11272          1 MRFRQLLPLFGALFALYIIWGSTYLVIRIGVES-WPPLMMAGVRFLIAGILLLAFLLLRGHP---LPTLRQWLNAALIGL   76 (292)
T ss_pred             CchHHHHHHHHHHHHHHHHHhhHHHHHHHHhcc-CCHHHHHHHHHHHHHHHHHHHHHHhCCC---CCcHHHHHHHHHHHH
Confidence            66777654 456777889999999999999884 9999999999999999988887654322   234677777888888


Q ss_pred             HHHHHhHHHHHhhc-cCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccC
Q 018069           80 VGITLNQGSYIFGL-DNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYR  158 (361)
Q Consensus        80 ~~~~~~~~~~~~al-~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~  158 (361)
                      ++...++.+++.+. ++++++.++++.++.|+++.+++.+ +|||++++      +++|+.++++|+.++.. +++    
T Consensus        77 ~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~------~~~~~~la~~Gv~ll~~-~~~----  144 (292)
T PRK11272         77 LLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKL------EWLGIAIGLAGIVLLNS-GGN----  144 (292)
T ss_pred             HHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchh------HHHHHHHHHHhHHHHhc-Ccc----
Confidence            87667888899999 9999999999999999999999986 69999998      99999999999988752 110    


Q ss_pred             CCCCCcccchhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhcCCc
Q 018069          159 PNSASDQSQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDS  238 (361)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  238 (361)
                                         .+....|++++++++++||.|.+..||..++.  +...+.++...+.+.+.+.....+.+.
T Consensus       145 -------------------~~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (292)
T PRK11272        145 -------------------LSGNPWGAILILIASASWAFGSVWSSRLPLPV--GMMAGAAEMLAAGVVLLIASLLSGERL  203 (292)
T ss_pred             -------------------cccchHHHHHHHHHHHHHHHHHHHHHhcCCCc--chHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence                               11234799999999999999999999975432  455667777788777777765433221


Q ss_pred             cccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHH
Q 018069          239 AAWQFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLY  318 (361)
Q Consensus       239 ~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~  318 (361)
                      .  ...+...|..+++.+++++.+++.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++++.|++
T Consensus       204 ~--~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~  281 (292)
T PRK11272        204 T--ALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVV  281 (292)
T ss_pred             c--ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHH
Confidence            1  11234678899999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             Hhhcccc
Q 018069          319 LVVLGKD  325 (361)
Q Consensus       319 l~~~~~~  325 (361)
                      +..+.++
T Consensus       282 ~~~~~~~  288 (292)
T PRK11272        282 LVTLGKY  288 (292)
T ss_pred             HHHHHHh
Confidence            8876443

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=100.00  E-value=1.6e-32  Score=251.12  Aligned_cols=279  Identities=16%  Similarity=0.225  Sum_probs=217.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 018069            9 HLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITLNQGS   88 (361)
Q Consensus         9 ~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~   88 (361)
                      .++.++++++||.+++..|...++ ++|..+.++|+.++++.+.++..   +   ++.+++   .....|++.....+.+
T Consensus         6 ~l~~l~~~~~Wg~~~~~~k~~~~~-~~p~~~~~~R~~~a~~~l~~~~~---~---~~~~~~---~~~~~g~~~~~~~~~~   75 (299)
T PRK11453          6 GVLALLVVVVWGLNFVVIKVGLHN-MPPLMLAGLRFMLVAFPAIFFVA---R---PKVPLN---LLLGYGLTISFGQFAF   75 (299)
T ss_pred             HHHHHHHHHHHhhhHHHHHHHHhc-CCHHHHHHHHHHHHHHHHHHHhc---C---CCCchH---HHHHHHHHHHHHHHHH
Confidence            466889999999999999999985 99999999999998877666542   1   112222   3444455544456667


Q ss_pred             HHhhccC-CCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCCCCCcccc
Q 018069           89 YIFGLDN-TSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQSQ  167 (361)
Q Consensus        89 ~~~al~~-~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~  167 (361)
                      ++.++++ .+++.++++.++.|+++.+++++++|||++.+      ++++++++++|+.++.. ++ .            
T Consensus        76 ~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~------~~~~~~l~~~Gv~ll~~-~~-~------------  135 (299)
T PRK11453         76 LFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGK------QLAGIALAIFGVLVLIE-DS-L------------  135 (299)
T ss_pred             HHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHH------HHHHHHHHHHhHHHhcc-cc-C------------
Confidence            7889998 58899999999999999999999999999998      99999999999998862 21 0            


Q ss_pred             hhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCCCh--hHHHHHHHHHHHHHHHHHHHhhcCCcc---ccc
Q 018069          168 SQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYPAR--LSVVSYSCFFSLMQFSAIGAYFERDSA---AWQ  242 (361)
Q Consensus       168 ~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~---~~~  242 (361)
                              +.......|+++++.++++|+.|.++.|+..++.+++  .....+....+.+.........+.+..   .+.
T Consensus       136 --------~~~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (299)
T PRK11453        136 --------NGQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLV  207 (299)
T ss_pred             --------CCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhc
Confidence                    0112234799999999999999999999987655422  233444444444433333333333211   112


Q ss_pred             cccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhc
Q 018069          243 FHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVL  322 (361)
Q Consensus       243 ~~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~  322 (361)
                      ..+...|..+++++++++.++|.+|++++++.++.+++.+.+++|+++.+++++++||+++..+++|+++|++|+++..+
T Consensus       208 ~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~  287 (299)
T PRK11453        208 TIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVF  287 (299)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhc
Confidence            23456799999999999999999999999999999999999999999999999999999999999999999999998876


Q ss_pred             ccc
Q 018069          323 GKD  325 (361)
Q Consensus       323 ~~~  325 (361)
                      .++
T Consensus       288 ~~~  290 (299)
T PRK11453        288 GLR  290 (299)
T ss_pred             chh
Confidence            554

>PRK11689 aromatic amino acid exporter; Provisional

Probab=100.00  E-value=3.1e-32  Score=248.58  Aligned_cols=285  Identities=12%  Similarity=0.057  Sum_probs=215.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHH
Q 018069            5 RAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITL   84 (361)
Q Consensus         5 ~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   84 (361)
                      |.++++++++++++||.+++..|...++ ++|..+.++|+.++.++++++..   ++..   +++ .++....+.++...
T Consensus         2 ~~~~~l~~l~a~~~Wg~~~~~~k~~~~~-~~P~~~~~~R~~~a~l~l~~~~~---~~~~---~~~-~~~~~~~~~l~~~~   73 (295)
T PRK11689          2 SQKATLIGLIAILLWSTMVGLIRGVSES-LGPVGGAAMIYSVSGLLLLLTVG---FPRL---RQF-PKRYLLAGGLLFVS   73 (295)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHHcc-CChHHHHHHHHHHHHHHHHHHcc---cccc---ccc-cHHHHHHHhHHHHH
Confidence            5678899999999999999999999996 99999999999999998887631   1111   111 22234455555667


Q ss_pred             hHHHHHhhccC----CCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCC
Q 018069           85 NQGSYIFGLDN----TSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPN  160 (361)
Q Consensus        85 ~~~~~~~al~~----~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~  160 (361)
                      ++.+++.++++    .++++++++.++.|+++.+++++++|||++++      +++|++++++|++++.. ++..... .
T Consensus        74 ~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~------~~~g~~l~~~Gv~li~~-~~~~~~~-~  145 (295)
T PRK11689         74 YEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWL------LIPGLLLALAGVAWVLG-GDNGLSL-A  145 (295)
T ss_pred             HHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHH------HHHHHHHHHHhHhheec-CCccchh-h
Confidence            77777777754    67788899999999999999999999999997      99999999999999863 2110000 0


Q ss_pred             CCCcccchhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhcCCccc
Q 018069          161 SASDQSQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAA  240 (361)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  240 (361)
                                  +...+..+...|+++++.++++||.|.++.||..++.+ +.....   ..+.+.+.+.... +++.  
T Consensus       146 ------------~~~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~~-~~~~~~---~~~~~~l~~~~~~-~~~~--  206 (295)
T PRK11689        146 ------------ELINNIASNPLSYGLAFIGAFIWAAYCNVTRKYARGKN-GITLFF---ILTALALWIKYFL-SPQP--  206 (295)
T ss_pred             ------------hhhhccccChHHHHHHHHHHHHHHHHHHHHhhccCCCC-chhHHH---HHHHHHHHHHHHH-hcCc--
Confidence                        00001112346999999999999999999999876654 554322   2233333333332 2221  


Q ss_pred             cccccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHh
Q 018069          241 WQFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLV  320 (361)
Q Consensus       241 ~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~  320 (361)
                      ....+...|..+++.++ ++.++|.+|++++|+.++++++.+.+++|+++.+++++++||++++.+++|+++|+.|+++.
T Consensus       207 ~~~~~~~~~~~l~~~~~-~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~  285 (295)
T PRK11689        207 AMVFSLPAIIKLLLAAA-AMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLC  285 (295)
T ss_pred             cccCCHHHHHHHHHHHH-HHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHH
Confidence            11233456777777775 78999999999999999999999999999999999999999999999999999999998888


Q ss_pred             hcccc
Q 018069          321 VLGKD  325 (361)
Q Consensus       321 ~~~~~  325 (361)
                      ...++
T Consensus       286 ~~~~~  290 (295)
T PRK11689        286 WLATR  290 (295)
T ss_pred             hhhHh
Confidence            65443

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=100.00  E-value=2.6e-31  Score=242.29  Aligned_cols=277  Identities=13%  Similarity=0.121  Sum_probs=221.5

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHH
Q 018069            4 ERAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGIT   83 (361)
Q Consensus         4 ~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   83 (361)
                      ++.+++.++++++++|+.++...|...++ ++|.++.++|++++.++++++...++    ++.++++++..+..|.+. .
T Consensus         9 ~~~~~~~~~~la~~~~~~~~~~~K~~~~~-~~~~~~~~~R~~~a~l~l~~~~~~~~----~~~~~~~~~~~~~~g~~~-~   82 (293)
T PRK10532          9 PVWLPILLLLIAMASIQSGASLAKSLFPL-VGAPGVTALRLALGTLILIAIFKPWR----LRFAKEQRLPLLFYGVSL-G   82 (293)
T ss_pred             ccchHHHHHHHHHHHHHhhHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHhHHh----ccCCHHHHHHHHHHHHHH-H
Confidence            45789999999999999999999999996 99999999999999988887653221    134567777777888774 5


Q ss_pred             HhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCCCCC
Q 018069           84 LNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSAS  163 (361)
Q Consensus        84 ~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~  163 (361)
                      ..+.++++++++++++.++++..+.|+++.+++.    ||++        +..++.++++|+.++.. .+.         
T Consensus        83 ~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~--------~~~~~~i~~~Gv~li~~-~~~---------  140 (293)
T PRK10532         83 GMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPV--------DFVWVVLAVLGLWFLLP-LGQ---------  140 (293)
T ss_pred             HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChH--------HHHHHHHHHHHHheeee-cCC---------
Confidence            7788999999999999999999999999998863    4432        34567788999988752 211         


Q ss_pred             cccchhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhcCCcccccc
Q 018069          164 DQSQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQF  243 (361)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  243 (361)
                                 + .......|++++++++++|+.|.+..|+..++.+ +... .+....+.+.+.+.....+.+    ..
T Consensus       141 -----------~-~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~~-~~~~-~~~~~~~~~~l~~~~~~~~~~----~~  202 (293)
T PRK10532        141 -----------D-VSHVDLTGAALALGAGACWAIYILSGQRAGAEHG-PATV-AIGSLIAALIFVPIGALQAGE----AL  202 (293)
T ss_pred             -----------C-cccCChHHHHHHHHHHHHHHHHHHHHHHHhccCC-chHH-HHHHHHHHHHHHHHHHHccCc----cc
Confidence                       0 1112347999999999999999999999877765 5555 455566666666666533221    11


Q ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhcc
Q 018069          244 HSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLG  323 (361)
Q Consensus       244 ~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~  323 (361)
                      .+...|..++++|++++.++|.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++|++|++...+.
T Consensus       203 ~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~  282 (293)
T PRK10532        203 WHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLT  282 (293)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhc
Confidence            23345666789999999999999999999999999999999999999999999999999999999999999999888766


Q ss_pred             ccc
Q 018069          324 KDE  326 (361)
Q Consensus       324 ~~~  326 (361)
                      .++
T Consensus       283 ~~~  285 (293)
T PRK10532        283 IRR  285 (293)
T ss_pred             CCC
Confidence            543

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=100.00  E-value=3.7e-31  Score=237.67  Aligned_cols=258  Identities=18%  Similarity=0.236  Sum_probs=219.3

Q ss_pred             HHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhHHHHHhhccCCCc
Q 018069           19 YAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITLNQGSYIFGLDNTSP   98 (361)
Q Consensus        19 ~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~   98 (361)
                      ||.+++..|...+.+.++....+.|++.+.+++.++...+       .+++++.+....|.++..+++.+++.|++++++
T Consensus         1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~   73 (260)
T TIGR00950         1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR-------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPV   73 (260)
T ss_pred             CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc-------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence            8999999999887668999999999999988888776432       234566778888888888999999999999999


Q ss_pred             chhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCCCCCcccchhhhhccCccc
Q 018069           99 IFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQSQSQMLLLGDTKE  178 (361)
Q Consensus        99 ~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (361)
                      ++++++.++.|+++.+++++++|||++++      +++|+.++++|+.++.. ++                       +.
T Consensus        74 ~~~~ii~~~~P~~~~~~~~l~~~e~~~~~------~~~gi~i~~~Gv~li~~-~~-----------------------~~  123 (260)
T TIGR00950        74 GEAALLLYLAPLYVTLLSDLMGKERPRKL------VLLAAVLGLAGAVLLLS-DG-----------------------NL  123 (260)
T ss_pred             hhhHHHHhhhHHHHHHHHHHHccCCCcHH------HHHHHHHHHHhHHhhcc-CC-----------------------cc
Confidence            99999999999999999999999999998      99999999999999852 22                       11


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHhHhhhCC-ChhHHHHHHHHHHHHHHHHHHHhhcCCccccccccchHHHHHHHHHH
Q 018069          179 KNWTLGCICLIGHCLFWSSWIVLQSPVLKKYP-ARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQFHSGWEIFCVFYSGL  257 (361)
Q Consensus       179 ~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  257 (361)
                      .....|+++++.++++|+.+.+..|+..++.+ ++.....+.+..+.+...+.....+++. .   .+...|..+++.++
T Consensus       124 ~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~---~~~~~~~~~~~~~~  199 (260)
T TIGR00950       124 SINPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP-Q---ALSLQWGALLYLGL  199 (260)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-C---cchHHHHHHHHHHH
Confidence            23458999999999999999999999877664 2334555677888888887776533322 1   24456778899999


Q ss_pred             HHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHH
Q 018069          258 VASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGL  317 (361)
Q Consensus       258 ~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~  317 (361)
                      +++.+++.++++++++.++.+++.+.+++|+++.+++++++||++++.+++|+++++.|+
T Consensus       200 ~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       200 IGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            999999999999999999999999999999999999999999999999999999999885

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=100.00  E-value=4.9e-31  Score=240.77  Aligned_cols=277  Identities=13%  Similarity=0.081  Sum_probs=206.3

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhccCC--C-CCCHHHHHHHHHHHHH
Q 018069            4 ERAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDR--P-TLTYSFLLQFFLLGLV   80 (361)
Q Consensus         4 ~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~--~-~~~~~~~~~~~~~g~~   80 (361)
                      ++.+|.+++++++++||.+++..|.. ++ ++|.++.++|+.++.+++.++...+++...  + ..+++.+. ....+.+
T Consensus         5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~-~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~   81 (296)
T PRK15430          5 QTRQGVLLALAAYFIWGIAPAYFKLI-YY-VPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIF-MLAVSAV   81 (296)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHh-cC-CCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHH-HHHHHHH
Confidence            56789999999999999999999985 53 999999999999999888777654321111  0 11233332 3346666


Q ss_pred             HHHHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCC
Q 018069           81 GITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPN  160 (361)
Q Consensus        81 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~  160 (361)
                      +...++.++++|++++++++++++.++.|+++.+++++++|||++++      ++.|++++++|+.++...++       
T Consensus        82 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~------~~~g~~l~~~Gv~li~~~~~-------  148 (296)
T PRK15430         82 LIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRM------QWLAVILAICGVLVQLWTFG-------  148 (296)
T ss_pred             HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHH------HHHHHHHHHHHHHHHHHHcC-------
Confidence            67789999999999999999999999999999999999999999998      99999999999999863111       


Q ss_pred             CCCcccchhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCC-ChhHHHHHHHHHHHHHHHHHHHhhcCCcc
Q 018069          161 SASDQSQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYP-ARLSVVSYSCFFSLMQFSAIGAYFERDSA  239 (361)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  239 (361)
                                    +    .    ..++++++++||.|.+..|+..++.. +....+.+....+.+...+..   .....
T Consensus       149 --------------~----~----~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~  203 (296)
T PRK15430        149 --------------S----L----PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAIA---DSSTS  203 (296)
T ss_pred             --------------C----c----cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHc---cCCcc
Confidence                          0    0    14688899999999999888643221 122223333333333222111   11111


Q ss_pred             ccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHH
Q 018069          240 AWQFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYL  319 (361)
Q Consensus       240 ~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l  319 (361)
                      .+...+...+..+...++ .+.++|.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++|+.|+.+
T Consensus       204 ~~~~~~~~~~~~~~~~g~-~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v  282 (296)
T PRK15430        204 HMGQNPMSLNLLLIAAGI-VTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAI  282 (296)
T ss_pred             cccCCcHHHHHHHHHHHH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence            111111122333444455 5789999999999999999999999999999999999999999999999999999988776


Q ss_pred             hhc
Q 018069          320 VVL  322 (361)
Q Consensus       320 ~~~  322 (361)
                      ...
T Consensus       283 ~~~  285 (296)
T PRK15430        283 FVM  285 (296)
T ss_pred             HHH
Confidence            653

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.97  E-value=2.4e-29  Score=230.69  Aligned_cols=278  Identities=13%  Similarity=0.115  Sum_probs=215.5

Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhHHHHHhhc
Q 018069           14 IFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITLNQGSYIFGL   93 (361)
Q Consensus        14 ~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al   93 (361)
                      +-.++-....+..|.+.++--.|..++++|+.++.+.+.+... ...+++++.+++++++.+..|+++ +.+..+.+.++
T Consensus         9 ~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~l   86 (302)
T TIGR00817         9 LWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWS-SGLPKRLKISSALLKLLLPVAIVH-TIGHVTSNVSL   86 (302)
T ss_pred             HHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence            3333334445688999985356999999999998877666522 112233456788999999999996 68889999999


Q ss_pred             cCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCCCCCcccchhhhhc
Q 018069           94 DNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQSQSQMLLL  173 (361)
Q Consensus        94 ~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~  173 (361)
                      +|++++.++++.++.|+++++++++++|||++++      ++.|+.++++|+.+..  .+                    
T Consensus        87 ~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~------~~~~l~l~~~Gv~l~~--~~--------------------  138 (302)
T TIGR00817        87 SKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPST------LWLSLLPIVGGVALAS--DT--------------------  138 (302)
T ss_pred             HhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHhhhc--CC--------------------
Confidence            9999999999999999999999999999999998      9999999999998653  11                    


Q ss_pred             cCcccchhHHHHHHHHHHHHHHHHHHHHHHhHhh--hCCChhHHHHHHHHHHHHHHHHHHHhhcCCcccc---cc----c
Q 018069          174 GDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLK--KYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAW---QF----H  244 (361)
Q Consensus       174 ~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---~~----~  244 (361)
                         +......|++++++++++|++|.+..||..+  +. ++.....++...+.+.+.|.....++.....   ..    .
T Consensus       139 ---~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~-~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~  214 (302)
T TIGR00817       139 ---ELSFNWAGFLSAMISNITFVSRNIFSKKAMTIKSL-DKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGV  214 (302)
T ss_pred             ---cccccHHHHHHHHHHHHHHHHHHHHHHHhhccCCC-CcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhccc
Confidence               1122347999999999999999999999887  55 4889999999999999999887655321111   00    0


Q ss_pred             cc-hHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhcc
Q 018069          245 SG-WEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLG  323 (361)
Q Consensus       245 ~~-~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~  323 (361)
                      .. ..+...+..++.+....+.+++.++++.+|++.++..+++|++++++|++++||+++..+++|+++++.|++++.+.
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~  294 (302)
T TIGR00817       215 NVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRV  294 (302)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHH
Confidence            00 11211223332223333345668999999999999999999999999999999999999999999999999999865


Q ss_pred             cc
Q 018069          324 KD  325 (361)
Q Consensus       324 ~~  325 (361)
                      |.
T Consensus       295 k~  296 (302)
T TIGR00817       295 KA  296 (302)
T ss_pred             hc
Confidence            43

specificities overlap.

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.97  E-value=5.6e-28  Score=219.18  Aligned_cols=273  Identities=15%  Similarity=0.160  Sum_probs=203.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhh-ccCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 018069            9 HLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLE-KKDRPTLTYSFLLQFFLLGLVGITLNQG   87 (361)
Q Consensus         9 ~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~   87 (361)
                      .++.++++++|+..++..|...++ -++  ..++++....+.+.|+..++. ++.++..+++ ++.....+.++...++.
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~-~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~   78 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADK-EPD--FLWWALLAHSVLLTPYGLWYLAQVGWSRLPAT-FWLLLAISAVANMVYFL   78 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCc-hhH--HHHHHHHHHHHHHHHHHHHhcccCCCCCcchh-hHHHHHHHHHHHHHHHH
Confidence            467889999999999999966654 334  357777777778888776542 2223333334 44445555555668999


Q ss_pred             HHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCCCCCcccc
Q 018069           88 SYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQSQ  167 (361)
Q Consensus        88 ~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~  167 (361)
                      +++.|+++.+++.++++.++.|+++.+++++++|||++++      +++|+.+++.|++++.. ++.             
T Consensus        79 ~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~------~~~g~~~~~~Gv~ll~~-~~~-------------  138 (281)
T TIGR03340        79 GLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPL------AWLGILIITLGLLVLGL-SRF-------------  138 (281)
T ss_pred             HHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHH------HHHHHHHHHHHHHHHhc-ccc-------------
Confidence            9999999999999999999999999999999999999998      99999999999998863 210             


Q ss_pred             hhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHH-HHHHHh---hcCCcccccc
Q 018069          168 SQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQF-SAIGAY---FERDSAAWQF  243 (361)
Q Consensus       168 ~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~---~~~~~~~~~~  243 (361)
                                ......|+.+++.++++|+.|.+..|+..++.++......+ ...+.+.. .+....   .+..  ... 
T Consensus       139 ----------~~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~-  204 (281)
T TIGR03340       139 ----------AQHRRKAYAWALAAALGTAIYSLSDKAAALGVPAFYSALGY-LGIGFLAMGWPFLLLYLKRHGR--SMF-  204 (281)
T ss_pred             ----------cccchhHHHHHHHHHHHHHHhhhhccccccchhcccccHHH-HHHHHHHHHHHHHHHHHHHhcc--chh-
Confidence                      01123688899999999999999988765444311111111 11222111 222221   1111  111 


Q ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHH
Q 018069          244 HSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYL  319 (361)
Q Consensus       244 ~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l  319 (361)
                      .....++.+++.+.+++.++|.+|++++++.++++++.+.+++|+++.+++++++||+++..+++|+++++.|+.+
T Consensus       205 ~~~~~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       205 PYARQILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            1223456677888888999999999999999999999999999999999999999999999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.96  E-value=2.3e-27  Score=215.35  Aligned_cols=298  Identities=15%  Similarity=0.185  Sum_probs=232.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-ccHHHHHHHHHHHHHHHHHHHHhhcc-CCCCCCHHHHHHHHHHHHHHHH
Q 018069            6 AKLHLAMTIFQFGYAGNHVIMRTALNMGVS-KLVFPLYRNIIAVIVLVPFAYFLEKK-DRPTLTYSFLLQFFLLGLVGIT   83 (361)
Q Consensus         6 ~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~-p~~~~~~r~~~~~l~l~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~   83 (361)
                      .+..++-=..+++-..+...+....+.|.+ |....++-++.-.++..++..++++. .+.+..+++|+++++++++-. 
T Consensus        12 ~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv-   90 (334)
T PF06027_consen   12 WIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDV-   90 (334)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHH-
Confidence            345555555666667777777776666665 77788888877777777766665432 222333456677778888865 


Q ss_pred             HhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCCCCC
Q 018069           84 LNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSAS  163 (361)
Q Consensus        84 ~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~  163 (361)
                      .++.+.+.|++|++.+.++++..+..+++.+++++++|||.++.      +++|+++++.|+.++...+....++     
T Consensus        91 ~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~------~~~gv~i~i~Gv~lv~~sD~~~~~~-----  159 (334)
T PF06027_consen   91 EANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWF------HILGVLICIAGVVLVVVSDVLSGSD-----  159 (334)
T ss_pred             HHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHH------HHHHHHHHHhhhhheeeeccccccc-----
Confidence            88999999999999999999999999999999999999999997      9999999999999987533221111     


Q ss_pred             cccchhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhcCCcccccc
Q 018069          164 DQSQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQF  243 (361)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  243 (361)
                                 +....+..+|+++++.++++||+++++.++..++.+ ......+..+++.++..+.....|.+....-.
T Consensus       160 -----------~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~~-~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~  227 (334)
T PF06027_consen  160 -----------SSSGSNPILGDLLALLGAILYAVSNVLEEKLVKKAP-RVEFLGMLGLFGFIISGIQLAILERSGIESIH  227 (334)
T ss_pred             -----------CCCCCccchhHHHHHHHHHHHHHHHHHHHHhcccCC-HHHHHHHHHHHHHHHHHHHHHheehhhhhccC
Confidence                       224567789999999999999999999999999886 78889999999999999888877664322112


Q ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhcc
Q 018069          244 HSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLG  323 (361)
Q Consensus       244 ~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~  323 (361)
                      .+...+..++. ..++.+.-|.+....++..+|+..++-..+..+++++++++++|+++++..++|.++|+.|.+++...
T Consensus       228 w~~~~~~~~v~-~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~  306 (334)
T PF06027_consen  228 WTSQVIGLLVG-YALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLA  306 (334)
T ss_pred             CChhhHHHHHH-HHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEcc
Confidence            23233333332 33356777888888999999999999999999999999999999999999999999999999999876


Q ss_pred             ccccc
Q 018069          324 KDEES  328 (361)
Q Consensus       324 ~~~~~  328 (361)
                      +++.+
T Consensus       307 ~~~~~  311 (334)
T PF06027_consen  307 ESPEE  311 (334)
T ss_pred             CCccc
Confidence            65443

Some of the sequences in this family are annotated as putative membrane proteins.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.96  E-value=9e-27  Score=216.80  Aligned_cols=284  Identities=15%  Similarity=0.168  Sum_probs=222.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-ccHHHHHHHHHHHHHHHHHHHHhhccCCCCC--CHHHHHHHHHHHHHH
Q 018069            5 RAKLHLAMTIFQFGYAGNHVIMRTALNMGVS-KLVFPLYRNIIAVIVLVPFAYFLEKKDRPTL--TYSFLLQFFLLGLVG   81 (361)
Q Consensus         5 ~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~-p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~   81 (361)
                      +.+..++.+..-.+-.......|..++. ++ |+.++++|++++.++...++... .+.+++.  .+++++.++..|+++
T Consensus        47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~~-~~~P~~l~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~llp~gl~~  124 (350)
T PTZ00343         47 KWKLALLFLTWYALNVLYVVDNKLALNM-LPLPWTISSLQLFVGWLFALLYWATG-FRKIPRIKSLKLFLKNFLPQGLCH  124 (350)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCCCCHHHHHHHHHHHHHHH
Confidence            3455556666666666777889999996 99 99999999999988765554322 2222333  345778899999998


Q ss_pred             HHHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCCC
Q 018069           82 ITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNS  161 (361)
Q Consensus        82 ~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~  161 (361)
                      ... +...+.|+++++++.++++.++.|+++++++++++|||++++      ++.+++++++|+.+.+.  +        
T Consensus       125 ~~~-~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~------~~l~l~l~v~Gv~l~~~--~--------  187 (350)
T PTZ00343        125 LFV-HFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLY------AYLSLIPIVGGVALASV--K--------  187 (350)
T ss_pred             HHH-HHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHH------HHHHHHHHHHHHHheec--c--------
Confidence            754 555679999999999999999999999999999999999998      99999999999999862  1        


Q ss_pred             CCcccchhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCC------ChhHHHHHHHHHHHHHHHHHHHhhc
Q 018069          162 ASDQSQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYP------ARLSVVSYSCFFSLMQFSAIGAYFE  235 (361)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~------~~~~~~~~~~~~~~i~~~~~~~~~~  235 (361)
                                     +......|++++++++++++.+.++.|+..++.+      ++.....+....+.++++|+....|
T Consensus       188 ---------------~~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e  252 (350)
T PTZ00343        188 ---------------ELHFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFE  252 (350)
T ss_pred             ---------------cchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence                           1122357999999999999999999999887542      3445666668889999999887555


Q ss_pred             CCc--cccc----cccchHHHHHHHHHHHHHHHHHHHHHH----HHhcCCceeeeccchhHHHHHHHHHHHHhcCccchh
Q 018069          236 RDS--AAWQ----FHSGWEIFCVFYSGLVASAMSFAVQIW----VIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLG  305 (361)
Q Consensus       236 ~~~--~~~~----~~~~~~~~~l~~~~~~~~~~~~~l~~~----a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~  305 (361)
                      ...  ..+.    ......+..+++. ++.+.+++.+++.    +++++++.+.+...+++|+++++++++++||++++.
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~  331 (350)
T PTZ00343        253 GKKWVPVWTNYTANMTNYTKGIIIFK-IFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLL  331 (350)
T ss_pred             hHHHHHHHHHhhhcccccchHHHHHH-HHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchH
Confidence            321  1110    1111122334443 4567889999995    999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHhhcc
Q 018069          306 GVIGASLIIAGLYLVVLG  323 (361)
Q Consensus       306 ~~iG~~lil~g~~l~~~~  323 (361)
                      +++|+++++.|++++...
T Consensus       332 ~~iG~~lii~Gv~lYs~~  349 (350)
T PTZ00343        332 GYLGMAVAILGALLYSLF  349 (350)
T ss_pred             hHHHHHHHHHHHHHHhhc
Confidence            999999999999998754

>TIGR00688 rarD rarD protein

Probab=99.95  E-value=3.7e-26  Score=204.58  Aligned_cols=248  Identities=11%  Similarity=0.038  Sum_probs=182.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhcc-----CCCCCCHHH-HHHHHHHHHH
Q 018069            7 KLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKK-----DRPTLTYSF-LLQFFLLGLV   80 (361)
Q Consensus         7 ~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~-----~~~~~~~~~-~~~~~~~g~~   80 (361)
                      ||++++++++++||.++++.|. .++ ++|.+++++|++++.+++.++...++++     ..++.++++ +......|++
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~~-~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   79 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LKP-LPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL   79 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hcc-CCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence            5899999999999999999998 454 9999999999999998877765443221     111112222 3345566665


Q ss_pred             HHHHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCC
Q 018069           81 GITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPN  160 (361)
Q Consensus        81 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~  160 (361)
                       ...++.++++|++++++++++++.++.|+++++++++++|||++++      +++++.++++|+.++...++       
T Consensus        80 -~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~------~~l~~~~~~~Gv~li~~~~~-------  145 (256)
T TIGR00688        80 -IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRF------QFIAVIIATLGVISNIVLKG-------  145 (256)
T ss_pred             -HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH------HHHHHHHHHHHHHHHHHHcC-------
Confidence             5589999999999999999999999999999999999999999998      99999999999998863111       


Q ss_pred             CCCcccchhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhcCCccc
Q 018069          161 SASDQSQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAA  240 (361)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  240 (361)
                                    +    ..    .+++.++++|+.|.+..|+..++ + ....... .........+... ..+....
T Consensus       146 --------------~----~~----~~~l~aa~~~a~~~i~~~~~~~~-~-~~~~~~~-~~~~~~~~~~~~~-~~~~~~~  199 (256)
T TIGR00688       146 --------------S----LP----WEALVLAFSFTAYGLIRKALKNT-D-LAGFCLE-TLSLMPVAIYYLL-QTDFATV  199 (256)
T ss_pred             --------------C----ch----HHHHHHHHHHHHHHHHHhhcCCC-C-cchHHHH-HHHHHHHHHHHHH-HhccCcc
Confidence                          1    01    35788999999999999986443 2 2222211 1111222221111 1111111


Q ss_pred             cccccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHH
Q 018069          241 WQFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIA  297 (361)
Q Consensus       241 ~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~  297 (361)
                      ....+...|..+++.|++ +.++|.++++++|+.++++++++.+++|+++.+++.++
T Consensus       200 ~~~~~~~~~~~l~~~g~~-t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       200 QQTNPFPIWLLLVLAGLI-TGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             cccCchhHHHHHHHHHHH-HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            111122478888888876 88999999999999999999999999999999999764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.94  E-value=5.4e-24  Score=193.87  Aligned_cols=286  Identities=20%  Similarity=0.291  Sum_probs=219.2

Q ss_pred             CCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHH
Q 018069            1 MVPERAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLV   80 (361)
Q Consensus         1 m~~~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   80 (361)
                      |+++...+..+.++..+.|+......|...+...++....+.|...+.+...+.....+...+ +..++ +++....+.+
T Consensus         1 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~   78 (292)
T COG0697           1 MKRALLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLR-PALRP-WLLLLLLALL   78 (292)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhccccc-ccccc-hHHHHHHHHH
Confidence            345667788899999999999999999988742455555566998888874444432211111 22222 4556677777


Q ss_pred             HHHHhHHHHHhhccCCCcchhhhhccchhHHHHHHHH-HhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCC
Q 018069           81 GITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAV-LLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRP  159 (361)
Q Consensus        81 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~-~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~  159 (361)
                      +...++.+++.++++++++.++++.++.|+++.++++ +++|||++++      ++.++.++++|++++.. .+...   
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~------~~~~~~~~~~Gv~lv~~-~~~~~---  148 (292)
T COG0697          79 GLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLL------QILGILLALAGVLLILL-GGGGG---  148 (292)
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHH------HHHHHHHHHHhHHheec-CCCcc---
Confidence            7778999999999999999999999999999999997 7779999998      99999999999999963 22110   


Q ss_pred             CCCCcccchhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHH-HHHHHHHHHHHHHHHhhcCCc
Q 018069          160 NSASDQSQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVS-YSCFFSLMQFSAIGAYFERDS  238 (361)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~  238 (361)
                                       ... ...|+.+++.++++++.+.+..|+.. +.+ +..... +..........+...  ....
T Consensus       149 -----------------~~~-~~~g~~~~l~a~~~~a~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~  206 (292)
T COG0697         149 -----------------GIL-SLLGLLLALAAALLWALYTALVKRLS-RLG-PVTLALLLQLLLALLLLLLFFL--SGFG  206 (292)
T ss_pred             -----------------hhH-HHHHHHHHHHHHHHHHHHHHHHHHhc-CCC-hHHHHHHHHHHHHHHHHHHHHh--cccc
Confidence                             011 57899999999999999999999887 443 444444 333312222222222  1111


Q ss_pred             cccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHH
Q 018069          239 AAWQFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLY  318 (361)
Q Consensus       239 ~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~  318 (361)
                         .......+..+.+.+++++.+++.++++++++.++..++.+.+++|+++.+++++++||+++..+++|+.+++.|+.
T Consensus       207 ---~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~  283 (292)
T COG0697         207 ---APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVL  283 (292)
T ss_pred             ---ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHH
Confidence               22344678888999998888999999999999999999999999999999999999999999999999999999998


Q ss_pred             Hhhcc
Q 018069          319 LVVLG  323 (361)
Q Consensus       319 l~~~~  323 (361)
                      +...+
T Consensus       284 l~~~~  288 (292)
T COG0697         284 LASLR  288 (292)
T ss_pred             HHhcc
Confidence            88765

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.92  E-value=3.7e-23  Score=174.19  Aligned_cols=275  Identities=16%  Similarity=0.148  Sum_probs=228.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 018069            8 LHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITLNQG   87 (361)
Q Consensus         8 g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   87 (361)
                      +++.++.+...--....+.|...+. +.+.-.+.+|..++.+++.++.    |+.+.+..++++..+...|+.. ...|.
T Consensus        13 p~~~ll~amvsiq~Gas~Ak~LFP~-vG~~g~t~lRl~~aaLIll~l~----RPwr~r~~~~~~~~~~~yGvsL-g~MNl   86 (292)
T COG5006          13 PILALLVAMVSIQSGASFAKSLFPL-VGAAGVTALRLAIAALILLALF----RPWRRRLSKPQRLALLAYGVSL-GGMNL   86 (292)
T ss_pred             cHHHHHHHHHHHHhhHHHHHHHccc-cChhhHHHHHHHHHHHHHHHHh----hHHHhccChhhhHHHHHHHHHH-HHHHH
Confidence            5778888888888888899999997 9999999999999999988887    3334467788899999999974 47899


Q ss_pred             HHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCCCCCcccc
Q 018069           88 SYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQSQ  167 (361)
Q Consensus        88 ~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~  167 (361)
                      +||.+++.+|.+.+..+.++.|+.+.++..=-      .+      +...+.+++.|..++.- .+              
T Consensus        87 ~FY~si~riPlGiAVAiEF~GPL~vA~~~sRr------~~------d~vwvaLAvlGi~lL~p-~~--------------  139 (292)
T COG5006          87 LFYLSIERIPLGIAVAIEFTGPLAVALLSSRR------LR------DFVWVALAVLGIWLLLP-LG--------------  139 (292)
T ss_pred             HHHHHHHhccchhhhhhhhccHHHHHHHhccc------hh------hHHHHHHHHHHHHhhee-cc--------------
Confidence            99999999999999999999999888765422      22      67788888999888862 22              


Q ss_pred             hhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhcCCccccccccch
Q 018069          168 SQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQFHSGW  247 (361)
Q Consensus       168 ~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  247 (361)
                             ......+..|..+++.++.||+.|.+..||..+..+ .-.-....+..++++..|+.......    ...++.
T Consensus       140 -------~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~-g~~g~a~gm~vAaviv~Pig~~~ag~----~l~~p~  207 (292)
T COG5006         140 -------QSVWSLDPVGVALALGAGACWALYIVLGQRAGRAEH-GTAGVAVGMLVAALIVLPIGAAQAGP----ALFSPS  207 (292)
T ss_pred             -------CCcCcCCHHHHHHHHHHhHHHHHHHHHcchhcccCC-CchHHHHHHHHHHHHHhhhhhhhcch----hhcChH
Confidence                   122345568999999999999999999999887655 56778888999999999998843322    122334


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhcccccc
Q 018069          248 EIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLGKDEE  327 (361)
Q Consensus       248 ~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~~~~~  327 (361)
                      -...-+..+++.+.+.|.+-..++++.++...+.+..+||.++.+.|++++||++|+.||+|+.+|+.+.....+..+|+
T Consensus       208 ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~~~  287 (292)
T COG5006         208 LLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTARKP  287 (292)
T ss_pred             HHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccCCC
Confidence            55666788999999999999999999999999999999999999999999999999999999999999887766554443

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.92  E-value=1.4e-22  Score=175.44  Aligned_cols=283  Identities=15%  Similarity=0.141  Sum_probs=224.7

Q ss_pred             CCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhcc-C-CC-CCCHHHHHHHHHH
Q 018069            1 MVPERAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKK-D-RP-TLTYSFLLQFFLL   77 (361)
Q Consensus         1 m~~~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~-~-~~-~~~~~~~~~~~~~   77 (361)
                      |+.+..+|+++.+.+.++||..+...|...+  .++.++...|.+-+..+...+....++. . +. ..+++.+....+.
T Consensus         1 ~~~~~~~Gil~~l~Ay~lwG~lp~y~kll~~--~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~   78 (293)
T COG2962           1 MAKDSRKGILLALLAYLLWGLLPLYFKLLEP--LPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALT   78 (293)
T ss_pred             CCCcccchhHHHHHHHHHHHHHHHHHHHHcc--CCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHH
Confidence            5545689999999999999999999997644  8999999999988887665555443321 1 11 2234444555555


Q ss_pred             HHHHHHHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCccc
Q 018069           78 GLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVY  157 (361)
Q Consensus        78 g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~  157 (361)
                      +.+ +..++..|.+|.+...+-++++-++..|++.++++++++|||+++-      |++++.++.+||....+..|+.. 
T Consensus        79 a~l-i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~------Q~iAV~lA~~GV~~~~~~~g~lp-  150 (293)
T COG2962          79 ALL-IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRL------QWIAVGLAAAGVLIQTWLLGSLP-  150 (293)
T ss_pred             HHH-HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHH------HHHHHHHHHHHHHHHHHHcCCCc-
Confidence            554 6789999999999999999999999999999999999999999995      99999999999999876433211 


Q ss_pred             CCCCCCcccchhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhcCC
Q 018069          158 RPNSASDQSQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERD  237 (361)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  237 (361)
                                                  ..++.-++.|+.|...-|+.  +. ++.+-.......-....+...+..++.
T Consensus       151 ----------------------------wval~la~sf~~Ygl~RK~~--~v-~a~~g~~lE~l~l~p~al~yl~~l~~~  199 (293)
T COG2962         151 ----------------------------WVALALALSFGLYGLLRKKL--KV-DALTGLTLETLLLLPVALIYLLFLADS  199 (293)
T ss_pred             ----------------------------HHHHHHHHHHHHHHHHHHhc--CC-chHHhHHHHHHHHhHHHHHHHHHHhcC
Confidence                                        35566688999999986553  33 356666666666666666666655554


Q ss_pred             ccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHH
Q 018069          238 SAAWQFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGL  317 (361)
Q Consensus       238 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~  317 (361)
                      .+.........+..++..|.+ |.++..++..+.|+++-+..+.++|.+|..-.+++.+++||+++..+++..+.|-.|+
T Consensus       200 ~~~~~~~~~~~~~LLv~aG~v-TavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL  278 (293)
T COG2962         200 GQFLQQNANSLWLLLVLAGLV-TAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLAL  278 (293)
T ss_pred             chhhhcCCchHHHHHHHhhHH-HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHH
Confidence            331222355677888888885 8999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhcccc
Q 018069          318 YLVVLGKD  325 (361)
Q Consensus       318 ~l~~~~~~  325 (361)
                      .++.+..-
T Consensus       279 ~l~~~d~l  286 (293)
T COG2962         279 ALFSIDGL  286 (293)
T ss_pred             HHHHHHHH
Confidence            99876544

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.91  E-value=5e-26  Score=192.59  Aligned_cols=292  Identities=16%  Similarity=0.164  Sum_probs=225.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHH
Q 018069            5 RAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITL   84 (361)
Q Consensus         5 ~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   84 (361)
                      ..+|.++..++ ..+..+.++.+..++  .+|.+..-.|++.-++...|...+.+...  ..+.....++++.|+.|. .
T Consensus        36 p~~gl~l~~vs-~ff~~~~vv~t~~~e--~~p~e~a~~r~l~~mlit~pcliy~~~~v--~gp~g~R~~LiLRg~mG~-t  109 (346)
T KOG4510|consen   36 PNLGLLLLTVS-YFFNSCMVVSTKVLE--NDPMELASFRLLVRMLITYPCLIYYMQPV--IGPEGKRKWLILRGFMGF-T  109 (346)
T ss_pred             CccCceehhhH-HHHhhHHHhhhhhhc--cChhHhhhhhhhhehhhhheEEEEEeeee--ecCCCcEEEEEeehhhhh-h
Confidence            34577777777 445555555555555  69999999998888888777766544322  122233456788888876 5


Q ss_pred             hHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCCCCCc
Q 018069           85 NQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASD  164 (361)
Q Consensus        85 ~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~  164 (361)
                      +..+.|||++|++.++++++.++.|.++.+++|.++|||.++-      +.++..+.+.|+++++  +++......++..
T Consensus       110 gvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~------eaL~s~itl~GVVLIv--RPpFlFG~~t~g~  181 (346)
T KOG4510|consen  110 GVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKF------EALGSLITLLGVVLIV--RPPFLFGDTTEGE  181 (346)
T ss_pred             HHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHH------HHHHHHHhhheEEEEe--cCCcccCCCcccc
Confidence            6778889999999999999999999999999999999999995      9999999999999996  7777666554444


Q ss_pred             ccchhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhcCCccccccc
Q 018069          165 QSQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQFH  244 (361)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  244 (361)
                      +++         .......|.+.++.+++.-|-..++.|++.|+.+ ......|....+.+...+...... .. .++ .
T Consensus       182 ~~s---------~~~~~~~gt~aai~s~lf~asvyIilR~iGk~~h-~~msvsyf~~i~lV~s~I~~~~ig-~~-~lP-~  248 (346)
T KOG4510|consen  182 DSS---------QVEYDIPGTVAAISSVLFGASVYIILRYIGKNAH-AIMSVSYFSLITLVVSLIGCASIG-AV-QLP-H  248 (346)
T ss_pred             ccc---------cccccCCchHHHHHhHhhhhhHHHHHHHhhcccc-EEEEehHHHHHHHHHHHHHHhhcc-ce-ecC-c
Confidence            443         1234446788888888888888888999888887 334444555555555444433222 11 222 3


Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhccc
Q 018069          245 SGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLGK  324 (361)
Q Consensus       245 ~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~~  324 (361)
                      .+.+|+.++.+|++ +++++.+.+.++|+..+..++++.+++.+++.+++.++|+|.|+++.|.|+++++.+.++...+|
T Consensus       249 cgkdr~l~~~lGvf-gfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~k  327 (346)
T KOG4510|consen  249 CGKDRWLFVNLGVF-GFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKK  327 (346)
T ss_pred             cccceEEEEEehhh-hhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHH
Confidence            56788999999996 79999999999999999999999999999999999999999999999999999999988876543

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.89  E-value=3.6e-21  Score=174.80  Aligned_cols=273  Identities=12%  Similarity=0.058  Sum_probs=202.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 018069            8 LHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITLNQG   87 (361)
Q Consensus         8 g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   87 (361)
                      ++++.++++++||+..+..|...  +.++.++.  |..++.+++..+....+. .+ +..++.+..-+..|.+ ...++.
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~~--g~~~~~~~--~~~~g~l~~~~~~~~~~~-~~-~~~~~~~~~g~l~G~~-w~ig~~   74 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKIG--GGPYSQTL--GTTFGALILSIAIAIFVL-PE-FWALSIFLVGLLSGAF-WALGQI   74 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhccC--CCHHHHHH--HHHHHHHHHHHHHHHHhC-Cc-ccccHHHHHHHHHHHH-HHhhhh
Confidence            57889999999999999999765  47777665  777777766655544322 11 1123333444444444 568899


Q ss_pred             HHHhhccCCCcchhhhhcc-chhHHHHHHHHHhhhcccccccccccch----hhHHHHHHHHHHHHHHhcCCcccCCCCC
Q 018069           88 SYIFGLDNTSPIFASAVEN-AVPAVTFIMAVLLRIEQIHLTRKDGIAK----VLGTLISVGGASVITLYKGPIVYRPNSA  162 (361)
Q Consensus        88 ~~~~al~~~~~~~~~~l~~-~~pi~~~lla~~~l~e~~~~~~~~~~~~----~~g~~l~~~Gv~li~~~~~~~~~~~~~~  162 (361)
                      +|+.+.++++.+.+..+.+ +.+++..+.+.+++|||.+.+      +    ++|++++++|++++.. .++.+..    
T Consensus        75 ~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~------~~~~~~~g~~l~l~G~~l~~~-~~~~~~~----  143 (290)
T TIGR00776        75 NQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSI------QTLLGLLALILIIIGVYLTSR-SKDKSAG----  143 (290)
T ss_pred             hHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchH------HHHHHHHHHHHHHHhHheEEe-ccccccc----
Confidence            9999999999999999988 899999999999999999997      8    9999999999888753 2111100    


Q ss_pred             CcccchhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHHHHHH----HHHHHHHHHHHhhcCCc
Q 018069          163 SDQSQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCF----FSLMQFSAIGAYFERDS  238 (361)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~----~~~i~~~~~~~~~~~~~  238 (361)
                                  ++...+..+|+++++.++++|+.|.+..|+.  ++ ++....+.+..    .+.++..+. .   +. 
T Consensus       144 ------------~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~--~~-~~~~~~~~~~~g~~~~~~~~~~~~-~---~~-  203 (290)
T TIGR00776       144 ------------IKSEFNFKKGILLLLMSTIGYLVYVVVAKAF--GV-DGLSVLLPQAIGMVIGGIIFNLGH-I---LA-  203 (290)
T ss_pred             ------------cccccchhhHHHHHHHHHHHHHHHHHHHHHc--CC-CcceehhHHHHHHHHHHHHHHHHH-h---cc-
Confidence                        0000234679999999999999999999875  34 36777544444    333333222 1   11 


Q ss_pred             cccccccchHHHHHHHHHHHHHHHHHHHHHHHHh-cCCceeeeccchhHHHHHHHHHHHHhcCccchhhH----HHHHHH
Q 018069          239 AAWQFHSGWEIFCVFYSGLVASAMSFAVQIWVID-RGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGV----IGASLI  313 (361)
Q Consensus       239 ~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~~-~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~----iG~~li  313 (361)
                      .++   ....++..+..|++ ..+++.+|..+.+ +.+++..+.+.+.+|+.+.++++++++|+.+..++    +|++++
T Consensus       204 ~~~---~~~~~~~~~~~Gi~-~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lI  279 (290)
T TIGR00776       204 KPL---KKYAILLNILPGLM-WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILI  279 (290)
T ss_pred             cch---HHHHHHHHHHHHHH-HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHH
Confidence            111   22333334448887 7999999999999 99999999999999999999999999999999999    999999


Q ss_pred             HHHHHHhhc
Q 018069          314 IAGLYLVVL  322 (361)
Q Consensus       314 l~g~~l~~~  322 (361)
                      +.|+.+...
T Consensus       280 i~~~~l~~~  288 (290)
T TIGR00776       280 IIAANILGI  288 (290)
T ss_pred             HHHHHHHhc
Confidence            999887654

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.85  E-value=8.9e-19  Score=160.51  Aligned_cols=266  Identities=16%  Similarity=0.171  Sum_probs=207.9

Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhHHHHHhhccCCCcchhhhhccchhHHHHHH
Q 018069           36 KLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIM  115 (361)
Q Consensus        36 p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll  115 (361)
                      |..+++.++....+...+.....+++..   ++..++..+..+++. .++..+.+.|++|++.....++.+..|+.++++
T Consensus        32 ~~~lt~~q~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~  107 (303)
T PF08449_consen   32 PLFLTFVQFAFNALFSFILLSLFKFPKS---RKIPLKKYAILSFLF-FLASVLSNAALKYISYPTQIVFKSSKPIPVMIL  107 (303)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhccccCC---CcChHHHHHHHHHHH-HHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHH
Confidence            8889999999988877777665442222   223344556666664 478889999999999999999999999999999


Q ss_pred             HHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCCCCCcccchhhhhccCcccchhHHHHHHHHHHHHHH
Q 018069          116 AVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQSQSQMLLLGDTKEKNWTLGCICLIGHCLFW  195 (361)
Q Consensus       116 a~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~  195 (361)
                      +.+++|+|.+++      ++.++++..+|+.+....+.......               +....+...|+++.+.+.++.
T Consensus       108 ~~l~~~k~y~~~------~~~~v~li~~Gv~~~~~~~~~~~~~~---------------~~~~~~~~~G~~ll~~sl~~~  166 (303)
T PF08449_consen  108 GVLILGKRYSRR------QYLSVLLITIGVAIFTLSDSSSSSSS---------------NSSSFSSALGIILLLLSLLLD  166 (303)
T ss_pred             HHHhcCccccHH------HHHHHHHHHhhHheeeeccccccccc---------------ccccccchhHHHHHHHHHHHH
Confidence            999999999997      99999999999999875332221110               112222334999999999999


Q ss_pred             HHHHHHHHhHhhhCC-ChhHHHHHHHHHHHHHHHHHHHhh--cCCccc--cccccchHHHHHHHHHHHHHHHHHHHHHHH
Q 018069          196 SSWIVLQSPVLKKYP-ARLSVVSYSCFFSLMQFSAIGAYF--ERDSAA--WQFHSGWEIFCVFYSGLVASAMSFAVQIWV  270 (361)
Q Consensus       196 a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a  270 (361)
                      +...+.++|..++++ ++.+..++....+.+...+.....  ++....  .....+..+..++...+ ++.+++.+.+..
T Consensus       167 a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~-~~~~g~~~i~~~  245 (303)
T PF08449_consen  167 AFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSL-TGALGQFFIFYL  245 (303)
T ss_pred             HHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence            999999999998766 678999999999999988887762  221111  11111223444444444 578888888999


Q ss_pred             HhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhcccccc
Q 018069          271 IDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLGKDEE  327 (361)
Q Consensus       271 ~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~~~~~  327 (361)
                      .++.++...+.+..++.+++++++.+++|+++++.+|+|+++++.|..++.+.++|+
T Consensus       246 ~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~  302 (303)
T PF08449_consen  246 IKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK  302 (303)
T ss_pred             HHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence            999999999999999999999999999999999999999999999999998776654

; GO: 0055085 transmembrane transport

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.82  E-value=5.1e-19  Score=157.30  Aligned_cols=301  Identities=13%  Similarity=0.163  Sum_probs=223.8

Q ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCC--CccHHHHHHHHHHHHHHHHHH----HHh---hccC----------
Q 018069            2 VPERAKLHLAMTIFQFGYAGNHVIMRTALNMGV--SKLVFPLYRNIIAVIVLVPFA----YFL---EKKD----------   62 (361)
Q Consensus         2 ~~~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~--~p~~~~~~r~~~~~l~l~~~~----~~~---~~~~----------   62 (361)
                      .+|...|+.++++..++|=.+.-+.+...+++-  .|+..++.....-.+.+.++.    .++   +|..          
T Consensus         9 ~~r~~lGl~lL~~V~viWV~SSeLT~~if~~~~f~kPFfiTY~~ts~fivYL~~~~~~d~~~~~~~~R~~~~~~~~~~e~   88 (416)
T KOG2765|consen    9 RWRWTLGLVLLLLVVVIWVASSELTQSIFEDYNFRKPFFITYLKTSLFIVYLPPFILIDAPWRILETRSKRSNHAIMEEA   88 (416)
T ss_pred             hhHHHHHHHHHHHHHHHHHhHHHHHHHHHhhcccCCceeEeeecccceehhhhhhhhhcchhhhhhhhccccchhhhhhh
Confidence            345678999999999999999999999888632  488777655433333333322    110   0100          


Q ss_pred             -----------------------------------------------CC--C-CCH------------HHHHHHHHHHHH
Q 018069           63 -----------------------------------------------RP--T-LTY------------SFLLQFFLLGLV   80 (361)
Q Consensus        63 -----------------------------------------------~~--~-~~~------------~~~~~~~~~g~~   80 (361)
                                                                     +.  + ..+            +..+..+....+
T Consensus        89 d~e~y~~~~~~~~~~~~~l~~~~~~~~~~~~l~s~~~~~~~s~~~e~~~~~~~~~rs~l~~~~~~t~~~~ak~sl~fc~l  168 (416)
T KOG2765|consen   89 DAEGYFSACTTDKTMESGLSGPESVPDKSPLLGSGEEEKPESTNLEVREKANTKKRSNLKERGKLTATQTAKLSLFFCPL  168 (416)
T ss_pred             hhhccccccccccccccccCCceeeeccccccccccccCCCCccccccccCCcccccchhhhhhhHHHHHHHHHHHHHHH
Confidence                                                           00  0 001            111223344444


Q ss_pred             HHHHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCC
Q 018069           81 GITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPN  160 (361)
Q Consensus        81 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~  160 (361)
                      . .+++..++.|+.+++++..+++.++.-+|+..++.++..||+++.      +++++++++.|++++.. ++..+++  
T Consensus       169 W-F~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~s------Kllav~~si~GViiVt~-~~s~~~~--  238 (416)
T KOG2765|consen  169 W-FLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLS------KLLAVFVSIAGVIIVTM-GDSKQNS--  238 (416)
T ss_pred             H-HHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHH------HHHHHHHhhccEEEEEe-ccccccc--
Confidence            3 478999999999999999999999999999999999999999997      99999999999999873 3332211  


Q ss_pred             CCCcccchhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHH---HHHHHHHHHHHHHHHhhcC-
Q 018069          161 SASDQSQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVS---YSCFFSLMQFSAIGAYFER-  236 (361)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~-  236 (361)
                                    +....+...|+++++++++.||+|.++.||-..++...+.+..   +..++..+.+.|..++... 
T Consensus       239 --------------~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~  304 (416)
T KOG2765|consen  239 --------------DLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFF  304 (416)
T ss_pred             --------------cCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHh
Confidence                          3345667899999999999999999999998776632333333   3344445555544443221 


Q ss_pred             CccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHH
Q 018069          237 DSAAWQFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAG  316 (361)
Q Consensus       237 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g  316 (361)
                      ....++.+...+...++..+++.++++-++|.+|.-.+++..+++-+.++...+++.+.++-|.++|+.+++|...|++|
T Consensus       305 ~~e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~  384 (416)
T KOG2765|consen  305 GEERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVG  384 (416)
T ss_pred             ccCcccCCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHH
Confidence            22345555666778888888999999999999999999999999999999999999999988999999999999999999


Q ss_pred             HHHhhccccc
Q 018069          317 LYLVVLGKDE  326 (361)
Q Consensus       317 ~~l~~~~~~~  326 (361)
                      .++.+.....
T Consensus       385 Fv~vn~~~~~  394 (416)
T KOG2765|consen  385 FVIVNISSEN  394 (416)
T ss_pred             Hhheeccccc
Confidence            9988865443

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.78  E-value=1.2e-18  Score=156.64  Aligned_cols=273  Identities=15%  Similarity=0.142  Sum_probs=218.0

Q ss_pred             HHHHHHHHh--cCCCccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhHHHHHhhccCCCcch
Q 018069           23 HVIMRTALN--MGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITLNQGSYIFGLDNTSPIF  100 (361)
Q Consensus        23 ~~~~k~~~~--~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~  100 (361)
                      ....|..++  ..--|..++.+++..+.+..+.....+..+..+..++..+..++.+|++. +++..+-+.++.+.+++.
T Consensus        33 ~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~-~~~~v~~n~Sl~~v~VsF  111 (316)
T KOG1441|consen   33 IILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVF-CISHVLGNVSLSYVPVSF  111 (316)
T ss_pred             EEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHH-HHHHHhcchhhhccchhH
Confidence            355677776  32458888888888888877777766555444444556777788888885 488999999999999999


Q ss_pred             hhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCCCCCcccchhhhhccCcccch
Q 018069          101 ASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQSQSQMLLLGDTKEKN  180 (361)
Q Consensus       101 ~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (361)
                      ++.+..++|++++++++++.+|+.+++      .+..+.....|+.+...  +                       +...
T Consensus       112 ~q~iKa~~P~~tvl~~~~~~~~~~s~~------~~lsL~piv~GV~ias~--~-----------------------e~~f  160 (316)
T KOG1441|consen  112 YQTIKALMPPFTVLLSVLLLGKTYSSM------TYLSLLPIVFGVAIASV--T-----------------------ELSF  160 (316)
T ss_pred             HHHHHhhcchhHHHHHHHHhCCCCcce------EEEEEEEeeeeEEEeee--c-----------------------cccc
Confidence            999999999999999999999999997      88999999999998863  1                       2335


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhHhh--hCC-ChhHHHHHHHHHHHHHHH-HHHHhhcCCcc---ccccccchHHHHHH
Q 018069          181 WTLGCICLIGHCLFWSSWIVLQSPVLK--KYP-ARLSVVSYSCFFSLMQFS-AIGAYFERDSA---AWQFHSGWEIFCVF  253 (361)
Q Consensus       181 ~~~G~~~~l~a~~~~a~~~v~~~~~~~--~~~-~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~---~~~~~~~~~~~~l~  253 (361)
                      +..|...++++.+..+..+++.|+.++  +.+ +++....++.-.+.+.++ |.....+++..   .....+.. ....+
T Consensus       161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~-~~~~~  239 (316)
T KOG1441|consen  161 NLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVT-FLILL  239 (316)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchh-hHHHH
Confidence            568999999999999999999999995  333 789999999999999999 87776555433   11111222 33333


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhcccccccc
Q 018069          254 YSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLGKDEESK  329 (361)
Q Consensus       254 ~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~~~~~~~  329 (361)
                      +.. ++....+...+..+.+++|.+.++.+.+.-++.++.++++|+++.++.+..|+++.+.|++++.+.+.++++
T Consensus       240 ~~s-v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~~  314 (316)
T KOG1441|consen  240 LNS-VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEKK  314 (316)
T ss_pred             HHH-HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhhc
Confidence            334 345666667778899999999999999999999999999999999999999999999999999977765443

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.68  E-value=1.7e-17  Score=140.14  Aligned_cols=257  Identities=13%  Similarity=0.143  Sum_probs=197.8

Q ss_pred             CccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhHHHHHhhccCCCcchhhhhccchhHHHHH
Q 018069           35 SKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFI  114 (361)
Q Consensus        35 ~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~l  114 (361)
                      .|....|+.+..-+++..++..++++     .-...|+..+++++... -++.+-..|.+|++...++++-.-..+.+.+
T Consensus        47 ~Pt~QtFl~Y~LLalVY~~~~~fR~~-----~~~~~~~hYilla~~DV-EaNy~vV~AyQyTsmtSi~lLDcwaip~v~~  120 (336)
T KOG2766|consen   47 APTSQTFLNYVLLALVYGPIMLFRRK-----YIKAKWRHYILLAFVDV-EANYFVVKAYQYTSMTSIMLLDCWAIPCVLV  120 (336)
T ss_pred             CccHHHHHHHHHHHHHHhhHHHhhhH-----HHHHHHHHhhheeEEee-cccEEEeeehhhcchHHHHHHHHhhhHHHHH
Confidence            48888999999999999998887542     11233445777777754 5677788999999999999999999999999


Q ss_pred             HHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCCCCCcccchhhhhccCcccchhHHHHHHHHHHHHH
Q 018069          115 MAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQSQSQMLLLGDTKEKNWTLGCICLIGHCLF  194 (361)
Q Consensus       115 la~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~  194 (361)
                      ++|+++|.|-++.      ++.|+++|+.|+.++++.+-... +                +.++.+..+|+++.++++.+
T Consensus       121 lsw~fLktrYrlm------ki~gV~iCi~GvvmvV~sDV~ag-d----------------~aggsnp~~GD~lvi~GATl  177 (336)
T KOG2766|consen  121 LSWFFLKTRYRLM------KISGVVICIVGVVMVVFSDVHAG-D----------------RAGGSNPVKGDFLVIAGATL  177 (336)
T ss_pred             HHHHHHHHHHhhh------eeeeEEeEecceEEEEEeeeccc-c----------------ccCCCCCccCcEEEEeccee
Confidence            9999999999996      99999999999999874221111 0                33466778999999999999


Q ss_pred             HHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhcCCccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 018069          195 WSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRG  274 (361)
Q Consensus       195 ~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~  274 (361)
                      ||+.++..+.+.|+.+ ...++....++|+++..+-.+ .+.... ............+. ..++.+.-|.+.-.-+|..
T Consensus       178 YaVSNv~EEflvkn~d-~~elm~~lgLfGaIIsaIQ~i-~~~~~~-~tl~w~~~i~~yl~-f~L~MFllYsl~pil~k~~  253 (336)
T KOG2766|consen  178 YAVSNVSEEFLVKNAD-RVELMGFLGLFGAIISAIQFI-FERHHV-STLHWDSAIFLYLR-FALTMFLLYSLAPILIKTN  253 (336)
T ss_pred             eeeccccHHHHHhcCc-HHHHHHHHHHHHHHHHHHHHh-hhccce-eeEeehHHHHHHHH-HHHHHHHHHHhhHHheecC
Confidence            9999999999999885 889999999999999999855 443322 22222122222222 3334555555555667888


Q ss_pred             CceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhccccc
Q 018069          275 GPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLGKDE  326 (361)
Q Consensus       275 ~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~~~~  326 (361)
                      +++-.++-..+.-+++.++  ..||-+.+|...+..+.+..|.+++..+++.
T Consensus       254 ~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~re~~  303 (336)
T KOG2766|consen  254 SATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTREKD  303 (336)
T ss_pred             CceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeeccccC
Confidence            8888888888888999888  6788889999999999999999888554443

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.67  E-value=1.2e-13  Score=123.51  Aligned_cols=297  Identities=12%  Similarity=0.094  Sum_probs=212.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcC---CCccHHHHHHHHHHHHHHHHHHHHhhcc----CCCC------CCHHHHHH
Q 018069            7 KLHLAMTIFQFGYAGNHVIMRTALNMG---VSKLVFPLYRNIIAVIVLVPFAYFLEKK----DRPT------LTYSFLLQ   73 (361)
Q Consensus         7 ~g~l~~l~~~~~~~~~~~~~k~~~~~~---~~p~~~~~~r~~~~~l~l~~~~~~~~~~----~~~~------~~~~~~~~   73 (361)
                      .-++.++...+-++......|+....+   +.|...+++--++-.++.....+...|.    ..+.      ..+++...
T Consensus        15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk   94 (345)
T KOG2234|consen   15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK   94 (345)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence            456677778888899999999887765   6677778777777777766666655322    1111      13334455


Q ss_pred             HHHHHHHHHHHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcC
Q 018069           74 FFLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKG  153 (361)
Q Consensus        74 ~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~  153 (361)
                      ..+-+++ +++.|-++|.++.+.+++..++.+++-.+.|+++..+++++|++++      ||.++.+.++|+.++-....
T Consensus        95 ~~vPa~i-YalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~------Qw~Al~lL~~Gv~~vQ~~~~  167 (345)
T KOG2234|consen   95 VSVPALI-YALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRL------QWMALVLLFAGVALVQLPSL  167 (345)
T ss_pred             HHHHHHH-HHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHH------HHHHHHHHHHHHHHHhccCC
Confidence            5555555 5577779999999999999999999999999999999999999997      99999999999999842112


Q ss_pred             CcccCCCCCCcccchhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCC-ChhHHHHHHHHHHHHHHHHHHH
Q 018069          154 PIVYRPNSASDQSQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYP-ARLSVVSYSCFFSLMQFSAIGA  232 (361)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~  232 (361)
                      +.....              .+....+...|....+.++++.+...++.+|++|+.+ +.+..+....+.|.++.+...+
T Consensus       168 ~~~~a~--------------~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~  233 (345)
T KOG2234|consen  168 SPTGAK--------------SESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTIL  233 (345)
T ss_pred             CCCCcc--------------CCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHh
Confidence            111110              0234567789999999999999999999999998766 3455555566666666666655


Q ss_pred             hhcCCccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHH
Q 018069          233 YFERDSAAWQFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASL  312 (361)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~l  312 (361)
                      ..+.+...+.... ..|-.....-++..+++=.+....+|+.+...=+.......+++.+.++.++|-.||....+|..+
T Consensus       234 ~~d~~~i~~~gff-~G~s~~vw~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~l  312 (345)
T KOG2234|consen  234 LQDGEAINEYGFF-YGYSSIVWLVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALL  312 (345)
T ss_pred             hccccccccCCcc-ccccHHHHHHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHH
Confidence            4332222111110 111112222222344444455666788888777778888999999999999999999999999999


Q ss_pred             HHHHHHHhhcccc
Q 018069          313 IIAGLYLVVLGKD  325 (361)
Q Consensus       313 il~g~~l~~~~~~  325 (361)
                      ++.++.++...++
T Consensus       313 Vi~Si~lY~~~P~  325 (345)
T KOG2234|consen  313 VILSIFLYSLYPA  325 (345)
T ss_pred             HHHHHHHhhcCCc
Confidence            9999999984443

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.63  E-value=2.8e-15  Score=113.56  Aligned_cols=135  Identities=16%  Similarity=0.168  Sum_probs=119.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhccCCC-CCCHHHHHHHHHHHHHHHHHh
Q 018069            7 KLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRP-TLTYSFLLQFFLLGLVGITLN   85 (361)
Q Consensus         7 ~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~   85 (361)
                      ...++.+++++.||...++.|...+. +||...++.|..+..+++..++...++.+.+ ..+.|.|..+.+.|+.+ .++
T Consensus         3 ~~~~~ALLsA~fa~L~~iF~KIGl~~-vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~-gls   80 (140)
T COG2510           3 AAIIYALLSALFAGLTPIFAKIGLEG-VDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAG-GLS   80 (140)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhccc-cCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHH-HHH
Confidence            46788999999999999999999995 9999999999999999888888765543322 24678888888888665 599


Q ss_pred             HHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHH
Q 018069           86 QGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVIT  149 (361)
Q Consensus        86 ~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~  149 (361)
                      +.+||+|++...++.+.++-.++|+++++++++++|||++.+      +++|+.+..+|++++.
T Consensus        81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~------~~iG~~LI~~Gailvs  138 (140)
T COG2510          81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLP------TWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHH------HHHHHHHHHhCeeeEe
Confidence            999999999999999999999999999999999999999997      9999999999998764

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.63  E-value=3.2e-14  Score=125.29  Aligned_cols=230  Identities=14%  Similarity=0.108  Sum_probs=169.2

Q ss_pred             CHHHHHHHHHHHHHHHHHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHH
Q 018069           67 TYSFLLQFFLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGAS  146 (361)
Q Consensus        67 ~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~  146 (361)
                      ++++..++.+-+++ +++.+.+.+.++++++++..+++.++..+++++++++++|+|++.+      ||.++.+.++|+.
T Consensus        13 ~~~~~~~~~vPA~l-Y~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~------qW~aL~lL~~Gv~   85 (244)
T PF04142_consen   13 SPKDTLKLAVPALL-YAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRR------QWLALFLLVAGVV   85 (244)
T ss_pred             hHHHHHHHHHHHHH-HHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchh------hHHHHHHHHHHHh
Confidence            45666677777777 5689999999999999999999999999999999999999999997      9999999999999


Q ss_pred             HHHHhcCCcccCCCCCCcccchhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCC-ChhHHHHHHHHHHHH
Q 018069          147 VITLYKGPIVYRPNSASDQSQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYP-ARLSVVSYSCFFSLM  225 (361)
Q Consensus       147 li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i  225 (361)
                      ++-. ++....+.++..+...       +....+...|.++.+.++++.+...++.+|..|+.+ +.+..+......+.+
T Consensus        86 lv~~-~~~~~~~~~~~~~~~~-------~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~  157 (244)
T PF04142_consen   86 LVQL-SSSQSSDNSSSSSVHH-------DASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGIL  157 (244)
T ss_pred             eeec-CCcccccccccccccc-------ccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHH
Confidence            8742 2221111110000000       123456689999999999999999999999999875 455666666777777


Q ss_pred             HHHHHHHhhcCCccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchh
Q 018069          226 QFSAIGAYFERDSAAWQFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLG  305 (361)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~  305 (361)
                      +.++.....+.+. ..+......+-...+..++...++=.+....+|+.+...=+.....+.+++.+.++.+||.+++..
T Consensus       158 ~~~~~~~~~~~~~-~~~~g~f~G~~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~  236 (244)
T PF04142_consen  158 FNLLALLLSDGSA-ISESGFFHGYSWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLS  236 (244)
T ss_pred             HHHHHHhcccccc-cccCCchhhcchHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchH
Confidence            7776655432221 111111111111222233345556666678899999999999999999999999999999999999


Q ss_pred             hHHHHHH
Q 018069          306 GVIGASL  312 (361)
Q Consensus       306 ~~iG~~l  312 (361)
                      ..+|+.+
T Consensus       237 f~lg~~~  243 (244)
T PF04142_consen  237 FLLGAAL  243 (244)
T ss_pred             Hhhheec
Confidence            9999865

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.61  E-value=7.8e-14  Score=116.74  Aligned_cols=256  Identities=14%  Similarity=0.122  Sum_probs=192.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhHHHHHhhccCCCcchhhhhccchhHHHHHHHH
Q 018069           38 VFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAV  117 (361)
Q Consensus        38 ~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~  117 (361)
                      .++++++....++.=.+...+++...  .+.+.+. +... .+.+.+.+...+.|++|.|-....+-.+.-|+-+++++.
T Consensus        55 aLVf~qC~~N~vfAkvl~~ir~~~~~--D~t~~~~-YaAc-s~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGV  130 (337)
T KOG1580|consen   55 ALVFFQCTANTVFAKVLFLIRKKTEI--DNTPTKM-YAAC-SASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGV  130 (337)
T ss_pred             HHHHHHHHHHHHHHHhheeecccccc--cCCcchH-HHHH-HHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeeh
Confidence            34566666666554444433332111  1122222 2222 333556777778999999999999999999999999999


Q ss_pred             HhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCCCCCcccchhhhhccCcccchhHHHHHHHHHHHHHHHH
Q 018069          118 LLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQSQSQMLLLGDTKEKNWTLGCICLIGHCLFWSS  197 (361)
Q Consensus       118 ~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~  197 (361)
                      .+.|.+-+|+      +...++....|+.+.+ ++.....                 ...+.+...|.++.+++...-++
T Consensus       131 l~~~KsY~w~------kY~cVL~IV~GValFm-YK~~Kv~-----------------g~e~~t~g~GElLL~lSL~mDGl  186 (337)
T KOG1580|consen  131 LFAHKSYHWR------KYCCVLMIVVGVALFM-YKENKVG-----------------GAEDKTFGFGELLLILSLAMDGL  186 (337)
T ss_pred             hhhcccccHH------HHHHHHHHHHHHHHhh-ccccccC-----------------CCcccccchHHHHHHHHHHhccc
Confidence            9999999998      9999999999999987 4532221                 22345667899999999999998


Q ss_pred             HHHHHHhHhhhCC-ChhHHHHHHHHHHHHHHHHHHHhhcCCc--cccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 018069          198 WIVLQSPVLKKYP-ARLSVVSYSCFFSLMQFSAIGAYFERDS--AAWQFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRG  274 (361)
Q Consensus       198 ~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~  274 (361)
                      ....+.++-+.+. ...+++++..+++.+.+..-.++.+.-.  ..+..--+..|+-+..+++ ++.+++++.+.-+...
T Consensus       187 Tg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai-~s~LGQ~fIF~tv~~F  265 (337)
T KOG1580|consen  187 TGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAI-ASCLGQWFIFKTVEEF  265 (337)
T ss_pred             chhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHH-HHHhhhHHHHHHHHHh
Confidence            8888888765544 4567889999999988887666433311  1122223356777777887 6899999999999999


Q ss_pred             CceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhc
Q 018069          275 GPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVL  322 (361)
Q Consensus       275 ~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~  322 (361)
                      +|-.-+++..+.-.|+++.+.++++.+++..||+|.++++.|...-..
T Consensus       266 gPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~  313 (337)
T KOG1580|consen  266 GPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVV  313 (337)
T ss_pred             CCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhh
Confidence            999999999999999999999999999999999999999999776543

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.59  E-value=7.1e-14  Score=121.64  Aligned_cols=265  Identities=15%  Similarity=0.188  Sum_probs=207.6

Q ss_pred             CccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhHHHHHhhccCCCcchhhhhccchhHHHHH
Q 018069           35 SKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFI  114 (361)
Q Consensus        35 ~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~l  114 (361)
                      ++....+.+-+++.++-..+..+++++.   ...+.|..+...++.+. ++..+.|.|++|.+-....+-.+.--+-+++
T Consensus        50 ~~~fL~~~q~l~~~~~s~~~l~~~k~~~---~~~apl~~y~~is~tn~-~s~~~~yeaLKyvSyPtq~LaKscKmIPVml  125 (327)
T KOG1581|consen   50 HSLFLVFCQRLVALLVSYAMLKWWKKEL---SGVAPLYKYSLISFTNT-LSSWCGYEALKYVSYPTQTLAKSCKMIPVML  125 (327)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhcccccC---CCCCchhHHhHHHHHhh-cchHHHHHHHHhccchHHHHHHHhhhhHHHH
Confidence            5677888888888877755554443332   22344555667777654 8888999999999999999999999999999


Q ss_pred             HHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCCCCCcccchhhhhccCcccchhHHHHHHHHHHHHH
Q 018069          115 MAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQSQSQMLLLGDTKEKNWTLGCICLIGHCLF  194 (361)
Q Consensus       115 la~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~  194 (361)
                      ...++.|.|.+.+      +.+...+.-.|+.+..+++.+....                .....+...|..+.....++
T Consensus       126 mg~Lvy~~ky~~~------eYl~~~LIs~GvsiF~l~~~s~s~~----------------~~g~~ns~~G~~Ll~~~L~f  183 (327)
T KOG1581|consen  126 MGTLVYGRKYSSF------EYLVAFLISLGVSIFSLFPNSDSSS----------------KSGRENSPIGILLLFGYLLF  183 (327)
T ss_pred             HHHHHhcCccCcH------HHHHHHHHHhheeeEEEecCCCCcc----------------ccCCCCchHhHHHHHHHHHH
Confidence            9999999999997      8999999999999887543322111                23445777999999999999


Q ss_pred             HHHHHHHHHhHhhhCC-ChhHHHHHHHHHHHHHHHHHHHhhcCCc--cccccccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 018069          195 WSSWIVLQSPVLKKYP-ARLSVVSYSCFFSLMQFSAIGAYFERDS--AAWQFHSGWEIFCVFYSGLVASAMSFAVQIWVI  271 (361)
Q Consensus       195 ~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~  271 (361)
                      -+..+..++++.+++. ..+.++++..+++.+......+..+...  ..+....+..++-++.... |+.+++.+.++-+
T Consensus       184 DgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~-~gavGQ~FI~~TI  262 (327)
T KOG1581|consen  184 DGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYST-CGAVGQLFIFYTI  262 (327)
T ss_pred             HhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHH-hhhhhhheehhhH
Confidence            9999999999988665 6789999999999998887755322211  1122222234555555555 5789999999999


Q ss_pred             hcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhccccc
Q 018069          272 DRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLGKDE  326 (361)
Q Consensus       272 ~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~~~~  326 (361)
                      ++.++...+.+..+.-+++++++.+.+|.+++..|++|..+++.|+.+-...+.+
T Consensus       263 ~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~  317 (327)
T KOG1581|consen  263 ERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK  317 (327)
T ss_pred             hhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999999999999887766555

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.58  E-value=1.6e-12  Score=114.74  Aligned_cols=291  Identities=12%  Similarity=0.053  Sum_probs=214.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHH--HHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHH
Q 018069            6 AKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPL--YRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGIT   83 (361)
Q Consensus         6 ~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~--~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   83 (361)
                      .++++..+.-++.--...++.|....+.=-|..+..  .|.+.+.+.+...-..+.- ..++.+++..+..+...++- .
T Consensus        11 ~~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv-~~~~l~~~~~kk~~P~~~lf-~   88 (314)
T KOG1444|consen   11 SSPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLV-NFRPLDLRTAKKWFPVSLLF-V   88 (314)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhcee-ecCCcChHHHHHHccHHHHH-H
Confidence            445666666666666677888998886223444444  7887777766665544332 23456677767767666663 3


Q ss_pred             HhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCCCCC
Q 018069           84 LNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSAS  163 (361)
Q Consensus        84 ~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~  163 (361)
                      +....--.+++|+++...+++.+.+|+++++....++|.+++.+      .+.++...++|......             
T Consensus        89 ~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~------v~~Sv~~m~~~s~~~~~-------------  149 (314)
T KOG1444|consen   89 GMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNK------VWASVFAMIIGSVAAAF-------------  149 (314)
T ss_pred             HHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhh------HHHHHHHHHHHHHhhcc-------------
Confidence            66666678999999999999999999999999999999777775      88888888888777652             


Q ss_pred             cccchhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCC-ChhHHHHHHHHHHHHHHHHHHHhhcCCc----
Q 018069          164 DQSQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYP-ARLSVVSYSCFFSLMQFSAIGAYFERDS----  238 (361)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~----  238 (361)
                                  .+......|+.+++...++.+.+.+..|+-.+..+ +.+...+|..+.+...+.....+.++..    
T Consensus       150 ------------~d~sf~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~  217 (314)
T KOG1444|consen  150 ------------TDLSFNLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSL  217 (314)
T ss_pred             ------------ccceecchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHh
Confidence                        12223335999999999999999999999877554 5678899999999998888887655421    


Q ss_pred             cccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHH
Q 018069          239 AAWQFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLY  318 (361)
Q Consensus       239 ~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~  318 (361)
                      ..........+..+...++++-++.| +-..+.+..++...++++..+...+.+-+.+++|++.++...+|..+-+.|-+
T Consensus       218 ~~~~~~~~~~~~~~~lScv~gf~isy-~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv  296 (314)
T KOG1444|consen  218 NFDNWSDSSVLVVMLLSCVMGFGISY-TSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGV  296 (314)
T ss_pred             hcccccchhHHHHHHHHHHHHHHHHH-HHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhh
Confidence            01111123346666666665444444 55789999999999999977888888878788888999999999999999999


Q ss_pred             Hhhccccccccc
Q 018069          319 LVVLGKDEESKY  330 (361)
Q Consensus       319 l~~~~~~~~~~~  330 (361)
                      ++.+.+.++++.
T Consensus       297 ~Y~~~~~~~k~~  308 (314)
T KOG1444|consen  297 LYSYATFRKKKQ  308 (314)
T ss_pred             HHhhhhhhhccC
Confidence            988776554433

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.58  E-value=5e-14  Score=106.82  Aligned_cols=135  Identities=19%  Similarity=0.155  Sum_probs=116.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhcCCccccccccchHHHHHHHHHHHHHHHH
Q 018069          184 GCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQFHSGWEIFCVFYSGLVASAMS  263 (361)
Q Consensus       184 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  263 (361)
                      ..++++++++++++..++.|-..++.+ |...++.......+.+........ +.+.....+.+.|..++..|+ ++..+
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~~vd-p~~At~IRtiVi~~~l~~v~~~~g-~~~~~~~~~~k~~lflilSGl-a~gls   80 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLEGVD-PDFATTIRTIVILIFLLIVLLVTG-NWQAGGEIGPKSWLFLILSGL-AGGLS   80 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccccC-ccHHHHHHHHHHHHHHHHHHHhcC-ceecccccCcceehhhhHHHH-HHHHH
Confidence            568999999999999999999888775 788888888888888777776433 333333346678888888886 78999


Q ss_pred             HHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhh
Q 018069          264 FAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVV  321 (361)
Q Consensus       264 ~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~  321 (361)
                      ..+|++|+|..+++++.++..++|+++.+++++++||++|..+++|+++|.+|.++..
T Consensus        81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            9999999999999999999999999999999999999999999999999999987654

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.57  E-value=6.5e-13  Score=115.62  Aligned_cols=253  Identities=13%  Similarity=0.178  Sum_probs=188.4

Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHhhccCCC---CCCHHHHHH-HHHHHHHHHHHhHHHHHhhccCCCcchhhhhccchhHH
Q 018069           36 KLVFPLYRNIIAVIVLVPFAYFLEKKDRP---TLTYSFLLQ-FFLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAV  111 (361)
Q Consensus        36 p~~~~~~r~~~~~l~l~~~~~~~~~~~~~---~~~~~~~~~-~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~  111 (361)
                      |..++.++.++-+++........+++..+   ..+|++..+ +...++. .+....+.+++++|++.+..++..+..++|
T Consensus        45 PLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtala-ta~DIGLSN~sl~yVtlSlYTM~KSSsi~F  123 (349)
T KOG1443|consen   45 PLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALA-TALDIGLSNWSLEYVTLSLYTMTKSSSILF  123 (349)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhh-hhcccccccceeeeeeeeeeeeccccHHHH
Confidence            78888888888877766655544433222   445655554 4455555 457888889999999999999999999999


Q ss_pred             HHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCCCCCcccchhhhhccCcccchhHHHHHHHHHH
Q 018069          112 TFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQSQSQMLLLGDTKEKNWTLGCICLIGH  191 (361)
Q Consensus       112 ~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a  191 (361)
                      +.+++.++.-||+++.      -..-+.+...|+++++. ++                        .+....|.++.+++
T Consensus       124 IllFs~if~lEk~~w~------L~l~v~lI~~Glflft~-Ks------------------------Tqf~i~Gf~lv~~a  172 (349)
T KOG1443|consen  124 ILLFSLIFKLEKFRWA------LVLIVLLIAVGLFLFTY-KS------------------------TQFNIEGFFLVLAA  172 (349)
T ss_pred             HHHHHHHHHhHHHHHH------HHHHHHHHhhheeEEEe-cc------------------------cceeehhHHHHHHH
Confidence            9999999999999995      55556666667776652 22                        22445799999999


Q ss_pred             HHHHHHHHHHHHhHhhhCC----ChhHHHHHHHHHHHHHHHHHHHhhcCCccc-----cccccch-HHHHHHHHHHHHHH
Q 018069          192 CLFWSSWIVLQSPVLKKYP----ARLSVVSYSCFFSLMQFSAIGAYFERDSAA-----WQFHSGW-EIFCVFYSGLVASA  261 (361)
Q Consensus       192 ~~~~a~~~v~~~~~~~~~~----~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-----~~~~~~~-~~~~l~~~~~~~~~  261 (361)
                      .++-++-..+.++.+++.+    +|+...+...-...+.++|..+.+|+....     +...+.. .+..+..++. ++.
T Consensus       173 S~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l-~g~  251 (349)
T KOG1443|consen  173 SLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISL-GGL  251 (349)
T ss_pred             HHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHH-HHH
Confidence            9998888888888777655    688888888888888899999988875322     2222222 2333333332 344


Q ss_pred             HHHHH---HHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhh
Q 018069          262 MSFAV---QIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVV  321 (361)
Q Consensus       262 ~~~~l---~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~  321 (361)
                      .++.+   -+.-+.+++....++.+...-+...+++..+.+|.++..-|.|..+.+.|+....
T Consensus       252 laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~  314 (349)
T KOG1443|consen  252 LAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHR  314 (349)
T ss_pred             HHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhc
Confidence            44444   3344678899999999999999999999999999999999999999999999883

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.53  E-value=3.2e-14  Score=112.67  Aligned_cols=125  Identities=25%  Similarity=0.367  Sum_probs=110.5

Q ss_pred             HHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhHHHHHhhccCC
Q 018069           17 FGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITLNQGSYIFGLDNT   96 (361)
Q Consensus        17 ~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~   96 (361)
                      ++||...+..|...++ .||....++|+..+.+ ++++....+++..+..+++++......+.++..+++.+++++++++
T Consensus         1 ~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~   78 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKK-ISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYI   78 (126)
T ss_pred             ceeeeHHHHHHHHhcc-CCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhc
Confidence            4799999999999996 9999999999999998 6666655554434566778888888888887678999999999999


Q ss_pred             CcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHH
Q 018069           97 SPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVIT  149 (361)
Q Consensus        97 ~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~  149 (361)
                      +++.++++.++.|+++.+++++++||+++++      +++|+.++++|++++.
T Consensus        79 ~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~------~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   79 SASIVSILQYLSPVFAAILGWLFLGERPSWR------QIIGIILIIIGVVLIS  125 (126)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999997      9999999999999874

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.52  E-value=4e-13  Score=115.35  Aligned_cols=277  Identities=17%  Similarity=0.132  Sum_probs=196.7

Q ss_pred             HHHHHHHHHHHhc---CC----CccHHHHHHHHHHHHHHHHHHHHhhccCCCCCC-----------HHHHHH-HHHHHHH
Q 018069           20 AGNHVIMRTALNM---GV----SKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLT-----------YSFLLQ-FFLLGLV   80 (361)
Q Consensus        20 ~~~~~~~k~~~~~---~~----~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~-----------~~~~~~-~~~~g~~   80 (361)
                      +.+.+++|++-+.   |.    +|+..+..-++.-++.++.+...+.|...+...           ...... ++.-.++
T Consensus        16 s~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~lfl~Pal~   95 (372)
T KOG3912|consen   16 SFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVLFLPPALC   95 (372)
T ss_pred             cHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcceecChHHH
Confidence            5678888987542   22    366666666777777777777776654332110           011111 2334444


Q ss_pred             HHHHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCC
Q 018069           81 GITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPN  160 (361)
Q Consensus        81 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~  160 (361)
                      - ..+..+.|.|+.+++++..+++.....+|+.+++.-+++.++..+      ||+|+.....|++++-.. +-...+  
T Consensus        96 D-i~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~------qWl~i~fv~lGlviVg~~-d~~~~~--  165 (372)
T KOG3912|consen   96 D-IAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGR------QWLGILFVSLGLVIVGSL-DVHLVT--  165 (372)
T ss_pred             H-HhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchh------hHHHHHHHHhhhheeeee-eccccc--
Confidence            4 367778889999999999999999999999999999999999997      999999999999987521 111100  


Q ss_pred             CCCcccchhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCC-ChhHHHHHHHHHHHHHHHHHHHhhc----
Q 018069          161 SASDQSQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYP-ARLSVVSYSCFFSLMQFSAIGAYFE----  235 (361)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~----  235 (361)
                       .+           -++..+...|+++.+.+-+.-|+.+++.+|..++++ +|.....+..++|.+++..+.....    
T Consensus       166 -~p-----------~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~  233 (372)
T KOG3912|consen  166 -DP-----------YTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPS  233 (372)
T ss_pred             -CC-----------ccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheec
Confidence             00           122356678999999999999999999999998877 8999999999999766665554322    


Q ss_pred             CC-cc----c-cc-------cccchHHHHHHHHHHHHHHHHHHHHHHH----HhcCCceeeeccchhHHHHHHHHHHHHh
Q 018069          236 RD-SA----A-WQ-------FHSGWEIFCVFYSGLVASAMSFAVQIWV----IDRGGPMFVSAYLPVQTMLVAIMATIAL  298 (361)
Q Consensus       236 ~~-~~----~-~~-------~~~~~~~~~l~~~~~~~~~~~~~l~~~a----~~~~~~~~~s~~~~~~pv~~~l~~~~~~  298 (361)
                      ++ +.    . +.       .........+...|   ..++..++|.+    .|+.++++-.++..+...+-.+++....
T Consensus       234 ~~sfS~~~~g~~eD~~~~~~~~~e~p~l~val~~---~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~  310 (372)
T KOG3912|consen  234 GDSFSCNPRGVLEDWGDAFAALQESPSLAVALIG---FTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMG  310 (372)
T ss_pred             CCcCcCCCCcchhhHHHHHHHhcCCchhHHHHhh---hhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHH
Confidence            11 10    0 11       01111122222223   33444444443    5778899999999999999999999999


Q ss_pred             cCccchhhHHHHHHHHHHHHHhh
Q 018069          299 GEEFYLGGVIGASLIIAGLYLVV  321 (361)
Q Consensus       299 ge~~s~~~~iG~~lil~g~~l~~  321 (361)
                      .|.+...|+.|.++.+.|+++++
T Consensus       311 ~E~f~llqilGFliLi~Gi~lY~  333 (372)
T KOG3912|consen  311 WEYFHLLQILGFLILIMGIILYN  333 (372)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999986

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.46  E-value=3.1e-13  Score=107.00  Aligned_cols=125  Identities=21%  Similarity=0.358  Sum_probs=108.5

Q ss_pred             HHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhcCCccccccccchHHHHHHHHHHHHHHHHHHHHHHHHh
Q 018069          193 LFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQFHSGWEIFCVFYSGLVASAMSFAVQIWVID  272 (361)
Q Consensus       193 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~~  272 (361)
                      ++||.+.+..|+..++.+ +....++++..+.+ ..+.....+...  ....+...+...++.+++++.+++.+++++++
T Consensus         1 ~~~a~~~~~~k~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~   76 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKKIS-PLSITFWRFLIAGI-LLILLLILGRKP--FKNLSPRQWLWLLFLGLLGTALAYLLYFYALK   76 (126)
T ss_pred             ceeeeHHHHHHHHhccCC-HHHHHHHHHHHHHH-HHHHHHhhcccc--ccCCChhhhhhhhHhhccceehHHHHHHHHHH
Confidence            468999999999999875 89999999999998 666666544432  33345567788888888888999999999999


Q ss_pred             cCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhh
Q 018069          273 RGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVV  321 (361)
Q Consensus       273 ~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~  321 (361)
                      +.+++.++.+.+++|+++.++++++++|++++.+++|+++++.|+++..
T Consensus        77 ~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   77 YISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999988764

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.34  E-value=2.1e-12  Score=110.71  Aligned_cols=277  Identities=15%  Similarity=0.088  Sum_probs=193.9

Q ss_pred             HHHHHHhcC----CCccHHHHHHHHHHHHHHHHHHHHhhccC----CC--CCCHHHHHHHHHHHHHHHHHhHHHHHhhcc
Q 018069           25 IMRTALNMG----VSKLVFPLYRNIIAVIVLVPFAYFLEKKD----RP--TLTYSFLLQFFLLGLVGITLNQGSYIFGLD   94 (361)
Q Consensus        25 ~~k~~~~~~----~~p~~~~~~r~~~~~l~l~~~~~~~~~~~----~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~al~   94 (361)
                      ..|+.++..    =.|..+.+.++++...+...+-....+-.    .+  +++.+.-+.+.-+.++-+ +....-+++++
T Consensus        46 ~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVfi-~mI~fnnlcL~  124 (347)
T KOG1442|consen   46 LNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVFI-LMISFNNLCLK  124 (347)
T ss_pred             hHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhheee-eehhccceehh
Confidence            455555521    14788888999888776665554433221    11  233333344444444322 34444568999


Q ss_pred             CCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCCCCCcccchhhhhcc
Q 018069           95 NTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQSQSQMLLLG  174 (361)
Q Consensus        95 ~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (361)
                      |.+++...+-.++..+|+.+++++++|+|-+..      -..++.+.++|-.+=+  +.+                    
T Consensus       125 yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~------~~~~C~lIi~GF~lGv--dqE--------------------  176 (347)
T KOG1442|consen  125 YVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFF------ALGCCLLIILGFGLGV--DQE--------------------  176 (347)
T ss_pred             hcceEEEEeccchhhhHHHHhHHhhcccccccc------cceeehhheehheecc--ccc--------------------
Confidence            999999999999999999999999999999985      5666666655544322  111                    


Q ss_pred             CcccchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCC-ChhHHHHHHHHHHHHHHHHHHHhhcCCcc--cccc-ccchHHH
Q 018069          175 DTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYP-ARLSVVSYSCFFSLMQFSAIGAYFERDSA--AWQF-HSGWEIF  250 (361)
Q Consensus       175 ~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~--~~~~-~~~~~~~  250 (361)
                      ...+.-.+.|.++++.+.++-|+..+..||...... .-+..++|....+.+..+|+..+.++-..  .++. +....|.
T Consensus       177 ~~~~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~  256 (347)
T KOG1442|consen  177 GSTGTLSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWI  256 (347)
T ss_pred             cccCccchhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHH
Confidence            112345568999999999999999999997765433 45788999999999999999886433111  1112 2344566


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhccccccccc
Q 018069          251 CVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLGKDEESKY  330 (361)
Q Consensus       251 ~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~~~~~~~~  330 (361)
                      .+...|+++-.++| .-.+-+|.++|.+..+-..-.-..-.+++..+++|.-+..-|-|-.++++|...+++.|.++.++
T Consensus       257 ~mtLsglfgF~mgy-vTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~  335 (347)
T KOG1442|consen  257 LMTLSGLFGFAMGY-VTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRK  335 (347)
T ss_pred             HHHHHHHHHHHhhh-eeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHh
Confidence            66666665333333 22455888999999999999999999999999999999999999999999999998876655444


Q ss_pred             c
Q 018069          331 N  331 (361)
Q Consensus       331 ~  331 (361)
                      +
T Consensus       336 ~  336 (347)
T KOG1442|consen  336 A  336 (347)
T ss_pred             h
Confidence            3

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=99.30  E-value=8.9e-11  Score=106.54  Aligned_cols=278  Identities=14%  Similarity=0.102  Sum_probs=161.9

Q ss_pred             CCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhccCCC-CCCHHH-HHHHHHHH
Q 018069            1 MVPERAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRP-TLTYSF-LLQFFLLG   78 (361)
Q Consensus         1 m~~~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~-~~~~~~-~~~~~~~g   78 (361)
                      |+.+..-|.+..+.++++-+....+-|....+ .+.                       ...++ ...++. ....+..|
T Consensus         1 ~~~~~~iGv~lav~ss~~~~~g~~lqk~~~~r-~~~-----------------------~~~~~~~~~~~~l~~~~W~~G   56 (300)
T PF05653_consen    1 MNTDFYIGVLLAVVSSIFIAVGFNLQKKSHLR-LPR-----------------------GSLRAGSGGRSYLRRPLWWIG   56 (300)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhc-----------------------ccccccchhhHHHhhHHHHHH
Confidence            66677889999999999999999999987553 111                       00010 011111 22456666


Q ss_pred             HHHHHHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccC
Q 018069           79 LVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYR  158 (361)
Q Consensus        79 ~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~  158 (361)
                      ++...++..+.+.|+.+.|++.++++..+.-++.++++..++|||++++      ++.|+.+++.|..++... ++.+.+
T Consensus        57 ~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~------~~~G~~l~i~G~~liv~~-~~~~~~  129 (300)
T PF05653_consen   57 LLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRR------DIVGCALIILGSVLIVIF-APKEEP  129 (300)
T ss_pred             HHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHh------HHhhHHHHHhhheeeEEe-CCCCCC
Confidence            6667788889999999999999999999999999999999999999997      999999999999988643 332211


Q ss_pred             CCCCCcccchhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHH-------HHH
Q 018069          159 PNSASDQSQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFS-------AIG  231 (361)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~-------~~~  231 (361)
                      ..+. ++..       ....+....-..... ..++..+.....+|..++.  ...........+....+       .+.
T Consensus       130 ~~t~-~~l~-------~~~~~~~fl~y~~~~-~~~~~~L~~~~~~r~g~~~--i~vyi~i~sl~Gs~tvl~~K~i~~~i~  198 (300)
T PF05653_consen  130 IHTL-DELI-------ALLSQPGFLVYFILV-LVLILILIFFIKPRYGRRN--ILVYISICSLIGSFTVLSAKAISILIK  198 (300)
T ss_pred             cCCH-HHHH-------HHhcCcceehhHHHH-HHHHHHHHHhhcchhcccc--eEEEEEEeccccchhhhHHHHHHHHHH
Confidence            1000 0000       000000011111111 1122222222222222221  11111111111111111       111


Q ss_pred             HhhcCCccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeccchh-HHHHHHHHHHHHhcCc--cchh---
Q 018069          232 AYFERDSAAWQFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPV-QTMLVAIMATIALGEE--FYLG---  305 (361)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~-~pv~~~l~~~~~~ge~--~s~~---  305 (361)
                      ...+++ .++.  .+..|..+ ...+.+........|+++++.+++.+.++.+. -...+.+-|.++++|.  .++.   
T Consensus       199 ~~~~g~-~~f~--~~~~y~l~-~~~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~  274 (300)
T PF05653_consen  199 LTFSGD-NQFT--YPLTYLLL-LVLVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQII  274 (300)
T ss_pred             HHhcCc-hhhh--hhHHHHHH-HHHHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHH
Confidence            111221 1121  22333333 33344567778888999999999999988877 4555566677788875  3443   


Q ss_pred             -hHHHHHHHHHHHHHhhccc
Q 018069          306 -GVIGASLIIAGLYLVVLGK  324 (361)
Q Consensus       306 -~~iG~~lil~g~~l~~~~~  324 (361)
                       ...|+.+++.|+++....+
T Consensus       275 ~~~~G~~~ii~GV~lL~~~~  294 (300)
T PF05653_consen  275 GFLCGFLIIIIGVFLLSSSK  294 (300)
T ss_pred             HHHHHHHHHHHhhheeeccC
Confidence             3567888888988876443

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.29  E-value=6.8e-11  Score=106.02  Aligned_cols=132  Identities=21%  Similarity=0.293  Sum_probs=112.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc--HHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHH
Q 018069            5 RAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKL--VFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGI   82 (361)
Q Consensus         5 ~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~--~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   82 (361)
                      +.+|.++.++++++|+......|...++ .++.  ....+++.++.+++.++.+..++.  +..+.+.+...+..++++.
T Consensus       126 ~~~G~~~~l~a~~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  202 (260)
T TIGR00950       126 NPAGLLLGLGSGISFALGTVLYKRLVKK-EGPELLQFTGWVLLLGALLLLPFAWFLGPN--PQALSLQWGALLYLGLIGT  202 (260)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhHHhhc-CCchHHHHHHHHHHHHHHHHHHHHHhcCCC--CCcchHHHHHHHHHHHHHH
Confidence            3579999999999999999999998875 6654  444477999998888887664332  2335677777888888877


Q ss_pred             HHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHH
Q 018069           83 TLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGA  145 (361)
Q Consensus        83 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv  145 (361)
                      .+++.+|++++++.+++.++.+.++.|+++.+++++++||+++.+      ++.|+.+.+.|+
T Consensus       203 ~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~------~~~G~~li~~g~  259 (260)
T TIGR00950       203 ALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLP------QLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHhc
Confidence            789999999999999999999999999999999999999999997      999999999886

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.28  E-value=5.2e-11  Score=99.18  Aligned_cols=277  Identities=13%  Similarity=0.104  Sum_probs=190.7

Q ss_pred             HHHHHHHHHhc-CCC-ccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhHHHHHhhccCCCcc
Q 018069           22 NHVIMRTALNM-GVS-KLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITLNQGSYIFGLDNTSPI   99 (361)
Q Consensus        22 ~~~~~k~~~~~-~~~-p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~   99 (361)
                      +.+-.|+.++. |++ -+.+++.+.++..+-+..+-..+.-+.| ..+.|.|...-   ++- ......--.+++|+++.
T Consensus        21 mTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR-~t~aK~WfpiS---fLL-v~MIyt~SKsLqyL~vp   95 (309)
T COG5070          21 MTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEFR-LTKAKKWFPIS---FLL-VVMIYTSSKSLQYLAVP   95 (309)
T ss_pred             HHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhhee-hhhhhhhcCHH---HHH-HHHHHhcccceeeeeee
Confidence            33445655543 222 3445566666655555554443333333 22233333222   211 12333344799999999


Q ss_pred             hhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCCCCCcccchhhhhccCcccc
Q 018069          100 FASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQSQSQMLLLGDTKEK  179 (361)
Q Consensus       100 ~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (361)
                      ..+++.+++.+.++.....++|.|++--      +..+.++.++.-+.-.+.+.+..                  .-..+
T Consensus        96 iYTiFKNltII~iAygEvl~Fgg~vtsl------~l~SFilMvlSS~va~w~D~q~~------------------~~~~~  151 (309)
T COG5070          96 IYTIFKNLTIILIAYGEVLFFGGRVTSL------ELLSFILMVLSSVVATWGDQQAS------------------AFKAQ  151 (309)
T ss_pred             HHHHhccceeehhHhhHHHHhcCccchh------hHHHHHHHHHHHHHhccchhhHH------------------HHHhc
Confidence            9999999999999999999999988884      78877777666655543111100                  11223


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhHhhhCC-ChhHHHHHHHHHHHHHHHHHHHhhcCCccc--cccccchHHHHHHHHH
Q 018069          180 NWTLGCICLIGHCLFWSSWIVLQSPVLKKYP-ARLSVVSYSCFFSLMQFSAIGAYFERDSAA--WQFHSGWEIFCVFYSG  256 (361)
Q Consensus       180 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~  256 (361)
                      ..+.|++++...++..+.+....|+-.+-.+ .....++|..+.+..+++.+..++|+....  ....+.....++...|
T Consensus       152 ~lN~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISg  231 (309)
T COG5070         152 ILNPGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISG  231 (309)
T ss_pred             ccCCceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHH
Confidence            4567999999999999999999888766433 567889999999999999999987764322  2222334466777778


Q ss_pred             HHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhccccccc
Q 018069          257 LVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLGKDEES  328 (361)
Q Consensus       257 ~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~~~~~~  328 (361)
                      +. ++.--++-.|+++.++.+..++++.++-.-..+-|.++|||+.+...+..+.+=..+-.++...+.+++
T Consensus       232 l~-svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~  302 (309)
T COG5070         232 LC-SVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQ  302 (309)
T ss_pred             HH-HhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            75 444444568999999999999999999999999999999999999999988887777667766555433

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=99.25  E-value=1.5e-10  Score=99.63  Aligned_cols=265  Identities=13%  Similarity=0.124  Sum_probs=178.0

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhHHHHHhhccC-CCcchhhhhccchhHHHHHH
Q 018069           37 LVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITLNQGSYIFGLDN-TSPIFASAVENAVPAVTFIM  115 (361)
Q Consensus        37 ~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~-~~~~~~~~l~~~~pi~~~ll  115 (361)
                      ..+++.++++-++--+++.-.... .+++.+.|++......    ....+.+-++++++ .+...-.++.+-.++.++++
T Consensus        34 NLITFaqFlFia~eGlif~skf~~-~k~kiplk~Y~i~V~m----FF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~  108 (330)
T KOG1583|consen   34 NLITFAQFLFIATEGLIFTSKFFT-VKPKIPLKDYAITVAM----FFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMIL  108 (330)
T ss_pred             eehHHHHHHHHHHhceeeeccccc-cCCCCchhhhheehhe----eeeeeeeccceeeecccceEEEEEecCcHHHHHHH
Confidence            456677776665544444311111 2245666664443322    22456677799998 88888889999999999999


Q ss_pred             HHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCCCCCcccchhhhhccCcccchhHHHHHHHHHHHHHH
Q 018069          116 AVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQSQSQMLLLGDTKEKNWTLGCICLIGHCLFW  195 (361)
Q Consensus       116 a~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~  195 (361)
                      +++++|.|-+.+      |..++++..+|+++..+.+.+.....  .++-+.    ++.......+..|+.+...+.+..
T Consensus       109 g~il~~k~Ys~~------Qy~Sv~~iTiGiiIcTl~s~~d~~~~--~~~l~~----~~~~~~~~~w~iGi~lL~~al~~s  176 (330)
T KOG1583|consen  109 GWILLGKRYSLR------QYSSVLMITIGIIICTLFSSKDGRSK--LSGLDS----GSAQSDFFWWLIGIALLVFALLLS  176 (330)
T ss_pred             HHHhccceeehh------hhhhHHhhhhhheeEEeecCcchhhh--hccccc----CcccccchHHHHHHHHHHHHHHHH
Confidence            999999888887      99999999999999886554332220  000000    000122345678999999999999


Q ss_pred             HHHHHHHHhHhhhCC-ChhHHHHHHHHHHHHHHHHHHHhhcCCcc-ccc--------------cccchHHHHHHHHHHHH
Q 018069          196 SSWIVLQSPVLKKYP-ARLSVVSYSCFFSLMQFSAIGAYFERDSA-AWQ--------------FHSGWEIFCVFYSGLVA  259 (361)
Q Consensus       196 a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~--------------~~~~~~~~~l~~~~~~~  259 (361)
                      |.-.++++...+++. ++-+..+|..+.+...    .++..+|.. .+.              ..-+..|+.++...+ .
T Consensus       177 a~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~----Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L-~  251 (330)
T KOG1583|consen  177 AYMGIYQETTYQKYGKHWKEALFYTHFLSLPL----FLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNVL-T  251 (330)
T ss_pred             HHHHHHHHHHHHHhcCChHHHHHHHHHhccch----HHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHHHHH-H
Confidence            999999988888776 6678888877766544    333333211 000              012234555443332 2


Q ss_pred             HHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhcc
Q 018069          260 SAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLG  323 (361)
Q Consensus       260 ~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~  323 (361)
                      ...+.-..+.--.+.++-+++++..+.-.++.+++.+.|+.++++..|+|..++..|.+++...
T Consensus       252 Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~  315 (330)
T KOG1583|consen  252 QYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANV  315 (330)
T ss_pred             HHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            3333333334446677889999999999999999999999999999999999999998887543

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=99.23  E-value=2.3e-11  Score=94.59  Aligned_cols=103  Identities=18%  Similarity=0.279  Sum_probs=85.2

Q ss_pred             HHHHHHHHHHHHHHHHHhhccC--CCCCCHHHHHHHHHHHHHHHHHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHH
Q 018069           41 LYRNIIAVIVLVPFAYFLEKKD--RPTLTYSFLLQFFLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVL  118 (361)
Q Consensus        41 ~~r~~~~~l~l~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~  118 (361)
                      .+|+..+.+++..+...+++..  .+..+++.+.+....|.++...++.++++|+++.+ +.++++.++.|+++.+++++
T Consensus         2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~   80 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL   80 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence            5788899988888877754321  12233455566677788877688999999999999 59999999999999999999


Q ss_pred             hhhcccccccccccchhhHHHHHHHHHHHHHH
Q 018069          119 LRIEQIHLTRKDGIAKVLGTLISVGGASVITL  150 (361)
Q Consensus       119 ~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~  150 (361)
                      ++|||++++      ++.++.++++|++++..
T Consensus        81 ~~~er~~~~------~~~a~~l~~~Gv~li~~  106 (113)
T PF13536_consen   81 FFKERLSPR------RWLAILLILIGVILIAW  106 (113)
T ss_pred             HhcCCCCHH------HHHHHHHHHHHHHHHhh
Confidence            999999998      99999999999999974

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=99.22  E-value=7.4e-09  Score=91.14  Aligned_cols=251  Identities=14%  Similarity=0.123  Sum_probs=172.2

Q ss_pred             CccHHHHHHHHHHHHHHHHHHHHhhccCCCCCC--HHHHHHHHHHHHHHHHHhHHHHHhhccCCCcchhhhhc-cchhHH
Q 018069           35 SKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLT--YSFLLQFFLLGLVGITLNQGSYIFGLDNTSPIFASAVE-NAVPAV  111 (361)
Q Consensus        35 ~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~-~~~pi~  111 (361)
                      +|.+..+--.+-+.++-+..... .+   |..+  .+.+..-++.|++. .+++...+.+.++..++.+.++. .++-+.
T Consensus        11 ~~~~Q~lG~t~Gali~alv~~~~-~~---p~~~~~~~~~~~~~lsG~~W-~iGq~~qf~s~~~~GVS~tmPiStg~QLvg   85 (269)
T PF06800_consen   11 KPANQILGTTIGALIFALVVFLF-RQ---PAFSMSGTSFIVAFLSGAFW-AIGQIGQFKSFKKIGVSKTMPISTGLQLVG   85 (269)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHH-hC---CCcchHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcceeeeccchhHHHHH
Confidence            45554444444444443333333 22   2333  36667777778775 58999999999999999999887 567788


Q ss_pred             HHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCCCCCcccchhhhhccCcccchhHHHHHHHHHH
Q 018069          112 TFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQSQSQMLLLGDTKEKNWTLGCICLIGH  191 (361)
Q Consensus       112 ~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a  191 (361)
                      +.+++.++++|.-+.+++  ..-.+++++.++|+.+... +++....                .+++.+..+|....+.+
T Consensus        86 ~sl~gv~~fgEW~~~~~~--~~G~~Al~liiiGv~lts~-~~~~~~~----------------~~~~~~~~kgi~~Ll~s  146 (269)
T PF06800_consen   86 TSLIGVLFFGEWTTTTQK--IIGFLALVLIIIGVILTSY-QDKKSDK----------------SSSKSNMKKGILALLIS  146 (269)
T ss_pred             HHHHHHhhcCCCCCcchH--HHHHHHHHHHHHHHHHhcc-ccccccc----------------cccccchhhHHHHHHHH
Confidence            999999999997776521  1224477888888888764 3322211                12345667899999999


Q ss_pred             HHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhcCCccccccccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 018069          192 CLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQFHSGWEIFCVFYSGLVASAMSFAVQIWVI  271 (361)
Q Consensus       192 ~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~  271 (361)
                      .+.|..|.+..|..  +. +++...+-+.....+....+..+....  .+    .+..+.-+..|++ -.++..++..+.
T Consensus       147 tigy~~Y~~~~~~~--~~-~~~~~~lPqaiGm~i~a~i~~~~~~~~--~~----~k~~~~nil~G~~-w~ignl~~~is~  216 (269)
T PF06800_consen  147 TIGYWIYSVIPKAF--HV-SGWSAFLPQAIGMLIGAFIFNLFSKKP--FF----EKKSWKNILTGLI-WGIGNLFYLISA  216 (269)
T ss_pred             HHHHHHHHHHHHhc--CC-ChhHhHHHHHHHHHHHHHHHhhccccc--cc----ccchHHhhHHHHH-HHHHHHHHHHhH
Confidence            99999999996652  33 467777766555555555554432111  11    1223333455553 567888889999


Q ss_pred             hcCCceeeeccchhHHHHHHHHHHHHhcCccchh----hHHHHHHHHHHHHH
Q 018069          272 DRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLG----GVIGASLIIAGLYL  319 (361)
Q Consensus       272 ~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~----~~iG~~lil~g~~l  319 (361)
                      ++.+.+..=.+..+.++++.+.|.++++|+=+..    .++|+++++.|.++
T Consensus       217 ~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  217 QKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL  268 (269)
T ss_pred             HhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence            9999999999999999999999999999987655    45688888887654

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.21  E-value=2.9e-10  Score=93.44  Aligned_cols=138  Identities=24%  Similarity=0.303  Sum_probs=114.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhHhhhC-----C-ChhHHHHHHHHHHHHHHHHHHHhhcCCcccccc---c------cchH
Q 018069          184 GCICLIGHCLFWSSWIVLQSPVLKKY-----P-ARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQF---H------SGWE  248 (361)
Q Consensus       184 G~~~~l~a~~~~a~~~v~~~~~~~~~-----~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~---~------~~~~  248 (361)
                      |.++++.+.++.+++.++.|+..++.     . ++..+..+....+.+.+.|...+.|........   .      ....
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            67899999999999999999998873     2 889999999999999999998887664311110   0      2234


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhc
Q 018069          249 IFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVL  322 (361)
Q Consensus       249 ~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~  322 (361)
                      +..++..|++ ....+...+..+++.+|...++...+..+...+.+++++||+++..+++|+++.+.|.+++.+
T Consensus        81 ~~~~~~~~~~-~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   81 IFLLILSGLL-AFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHH-HHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            5555555554 567777788999999999999999999999999999999999999999999999999988754

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.18  E-value=1.5e-09  Score=93.16  Aligned_cols=227  Identities=15%  Similarity=0.155  Sum_probs=174.3

Q ss_pred             HHHHHHHHHHHHHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHh
Q 018069           72 LQFFLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLY  151 (361)
Q Consensus        72 ~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~  151 (361)
                      +.+..++++.. ....+..-++.|++-..-.++..+--+-+.+.+.++-+.|-++.      +.++..+..+|.++..+.
T Consensus       107 rtY~~la~~t~-gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~------d~~aA~lm~lGli~FTLA  179 (367)
T KOG1582|consen  107 RTYVILAFLTV-GTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVH------DYIAAMLMSLGLIWFTLA  179 (367)
T ss_pred             hHhhhhHhhhh-hccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHH------HHHHHHHHHHHHHhhhhc
Confidence            33445555543 56667778888988888888888888889999999988888886      999999999999998864


Q ss_pred             cCCcccCCCCCCcccchhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCC-ChhHHHHHHHHHHHHHHHHH
Q 018069          152 KGPIVYRPNSASDQSQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYP-ARLSVVSYSCFFSLMQFSAI  230 (361)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~  230 (361)
                      +.                     ......+..|+.+.-.|-++-|.-.-.+++.++..+ ...++.++....+.+.+...
T Consensus       180 Ds---------------------~~sPNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~  238 (367)
T KOG1582|consen  180 DS---------------------QTSPNFNLIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAP  238 (367)
T ss_pred             cc---------------------ccCCCcceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHH
Confidence            33                     223345568999999999999988888888888776 45678888888888887777


Q ss_pred             HHhhcCCcccccc---ccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhH
Q 018069          231 GAYFERDSAAWQF---HSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGV  307 (361)
Q Consensus       231 ~~~~~~~~~~~~~---~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~  307 (361)
                      ....+.-...|+.   .+.......++.+. .+.+++.....-++..++.+++.+....--+++++++++|..+++....
T Consensus       239 mvlTge~f~a~~fcaehp~~tyGy~~~~s~-~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~  317 (367)
T KOG1582|consen  239 MVLTGELFSAWTFCAEHPVRTYGYAFLFSL-AGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYV  317 (367)
T ss_pred             HHhcccchhhhHHHHhCcHhHHHHHHHHHH-HhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHh
Confidence            7655443333332   22223333333333 4667777777778999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhcccccc
Q 018069          308 IGASLIIAGLYLVVLGKDEE  327 (361)
Q Consensus       308 iG~~lil~g~~l~~~~~~~~  327 (361)
                      -|..+++.|+++..+.++.+
T Consensus       318 ~~gllv~lgI~Ln~ysk~nk  337 (367)
T KOG1582|consen  318 WSGLLVVLGIYLNMYSKRNK  337 (367)
T ss_pred             hhhHHHHHHHHhhcccCCCC
Confidence            99999999999998877443

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.13  E-value=1.3e-09  Score=99.60  Aligned_cols=138  Identities=12%  Similarity=0.183  Sum_probs=109.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhcCCcccc-c-cccchHHHHHHHHHH
Q 018069          180 NWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAW-Q-FHSGWEIFCVFYSGL  257 (361)
Q Consensus       180 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~-~~~~~~~~~l~~~~~  257 (361)
                      +..+|++++++++++|+...+..|.. .+.+ +....+++...+.+.+.+...... +.... + ..+...+ .....+.
T Consensus         5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~-~~~~~~~R~~~a~~~l~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~   80 (296)
T PRK15430          5 QTRQGVLLALAAYFIWGIAPAYFKLI-YYVP-ADEILTHRVIWSFFFMVVLMSICR-QWSYLKTLIQTPQKI-FMLAVSA   80 (296)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHh-cCCC-HHHHHHHHHHHHHHHHHHHHHHHc-cHHHHHHHHcCHHHH-HHHHHHH
Confidence            45689999999999999999999764 5554 899999999999887776655322 11111 0 0112222 2333555


Q ss_pred             HHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhh
Q 018069          258 VASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVV  321 (361)
Q Consensus       258 ~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~  321 (361)
                      ++.+..+.++++++++.+++.++.+.++.|++..++++++++|+++..+++|+++.+.|+.+..
T Consensus        81 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~  144 (296)
T PRK15430         81 VLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL  144 (296)
T ss_pred             HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence            5677889999999999999999999999999999999999999999999999999999987764

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.12  E-value=2e-09  Score=98.21  Aligned_cols=136  Identities=13%  Similarity=0.045  Sum_probs=111.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHh
Q 018069            6 AKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITLN   85 (361)
Q Consensus         6 ~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   85 (361)
                      ..|.++.++++++|+...+..|...++ .++.... +...++.+++.++......  ....++..+...+..|+++..++
T Consensus       147 ~~G~ll~l~aa~~~a~~~v~~r~~~~~-~~~~~~~-~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~l~lgv~~t~~~  222 (293)
T PRK10532        147 LTGAALALGAGACWAIYILSGQRAGAE-HGPATVA-IGSLIAALIFVPIGALQAG--EALWHWSILPLGLAVAILSTALP  222 (293)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHH-HHHHHHHHHHHHHHHHccC--cccCCHHHHHHHHHHHHHHHHHH
Confidence            458999999999999999999988764 7777764 4456666666666654322  11234455555678888888889


Q ss_pred             HHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHh
Q 018069           86 QGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLY  151 (361)
Q Consensus        86 ~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~  151 (361)
                      +.+|++++++.+++.++++..++|+++.++++++++|+++..      +++|..+.+.|++.....
T Consensus       223 ~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~------~~iG~~lIl~~~~~~~~~  282 (293)
T PRK10532        223 YSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLI------QWLALGAIIAASMGSTLT  282 (293)
T ss_pred             HHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHHhc
Confidence            999999999999999999999999999999999999999997      999999999999998653

>PRK13499 rhamnose-proton symporter; Provisional

Probab=99.10  E-value=1.3e-07  Score=86.75  Aligned_cols=302  Identities=13%  Similarity=0.030  Sum_probs=178.8

Q ss_pred             CCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHH-HHHHHHHHHHHHHH--Hhhc---cCCCCCCHHHHHHH
Q 018069            1 MVPERAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLY-RNIIAVIVLVPFAY--FLEK---KDRPTLTYSFLLQF   74 (361)
Q Consensus         1 m~~~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~-r~~~~~l~l~~~~~--~~~~---~~~~~~~~~~~~~~   74 (361)
                      |.++...|+++.+++.++||..+.-.|. .+. .+ +|.-+. -.+++.+ +.|+..  ...+   ......+.+.+..-
T Consensus         1 m~~~~~~G~~~~~i~~~~~GS~~~p~K~-~k~-w~-wE~~W~v~gi~~wl-~~~~~~g~~~~~~f~~~~~~~~~~~~~~~   76 (345)
T PRK13499          1 MSNAIILGIIWHLIGGASSGSFYAPFKK-VKK-WS-WETMWSVGGIFSWL-ILPWLIAALLLPDFWAYYSSFSGSTLLPV   76 (345)
T ss_pred             CCchhHHHHHHHHHHHHHhhcccccccc-cCC-Cc-hhHHHHHHHHHHHH-HHHHHHHHHHhhhHHHHHHhcCHHHHHHH
Confidence            5667788999999999999999999997 342 33 232221 1111111 111110  1001   11223456677777


Q ss_pred             HHHHHHHHHHhHHHHHhhccCCCcchhhhhc-cchhHHHHHHHHHhhhccc---ccccccccchhhHHHHHHHHHHHHHH
Q 018069           75 FLLGLVGITLNQGSYIFGLDNTSPIFASAVE-NAVPAVTFIMAVLLRIEQI---HLTRKDGIAKVLGTLISVGGASVITL  150 (361)
Q Consensus        75 ~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~-~~~pi~~~lla~~~l~e~~---~~~~~~~~~~~~g~~l~~~Gv~li~~  150 (361)
                      ++.|++- .+++..++.++++...+.+..+. .++-+...++..++++|=.   +.  +......+|+++.++|+.+...
T Consensus        77 ~l~G~~W-~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t--~~g~~~~~gv~liliGi~l~s~  153 (345)
T PRK13499         77 FLFGALW-GIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLAT--NGGRMTLLGVLVALIGVAIVGR  153 (345)
T ss_pred             HHHHHHH-HhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHcccccccccc--chHHHHHHHHHHHHHHHHHHHH
Confidence            7778775 58999999999999999997554 7789999999999998743   22  2223478889999999999874


Q ss_pred             hcCCcccCCCCCCcccchhhhhccCcccchhHHHHHHHHHHHHHHHHHH-------HHHHhHhhhCCChhHHHHHHHH--
Q 018069          151 YKGPIVYRPNSASDQSQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWI-------VLQSPVLKKYPARLSVVSYSCF--  221 (361)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~-------v~~~~~~~~~~~~~~~~~~~~~--  221 (361)
                      .....+++.+    ++        +..+.+..+|++.++++.+.++.|.       ...+...+...++.....-+..  
T Consensus       154 Ag~~k~~~~~----~~--------~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~  221 (345)
T PRK13499        154 AGQLKERKMG----IK--------KAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVI  221 (345)
T ss_pred             hhhhcccccc----cc--------cccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHH
Confidence            1111111000    00        0234677899999999999999999       3333211111123333333322  


Q ss_pred             -HHHH-HHHHHHHhh--c-CCccccccc--cchHHHHH----HHHHHHHHHHHHHHHHHHHhcCCceeeec---c-chhH
Q 018069          222 -FSLM-QFSAIGAYF--E-RDSAAWQFH--SGWEIFCV----FYSGLVASAMSFAVQIWVIDRGGPMFVSA---Y-LPVQ  286 (361)
Q Consensus       222 -~~~i-~~~~~~~~~--~-~~~~~~~~~--~~~~~~~l----~~~~~~~~~~~~~l~~~a~~~~~~~~~s~---~-~~~~  286 (361)
                       .+.+ ...+.....  . ++.......  +...++.-    +..|+ .-.+++.++..+-++.+......   + +.+.
T Consensus       222 ~~G~~~~n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~-~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~  300 (345)
T PRK13499        222 MGGGAITNLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGV-MWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFY  300 (345)
T ss_pred             HHHHHHHHHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCccchHHHHHhccHH
Confidence             2322 222222211  1 111111111  11112222    33333 35667777778777775543333   3 3677


Q ss_pred             HHHHHHHHHHHhcCccc------hhhHHHHHHHHHHHHHhhcc
Q 018069          287 TMLVAIMATIALGEEFY------LGGVIGASLIIAGLYLVVLG  323 (361)
Q Consensus       287 pv~~~l~~~~~~ge~~s------~~~~iG~~lil~g~~l~~~~  323 (361)
                      .+++.++|. +++|.=+      ...++|++++++|..+....
T Consensus       301 ViistlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~  342 (345)
T PRK13499        301 VLCGNLWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGLG  342 (345)
T ss_pred             HHHHHHhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence            799999998 5999754      55678999999998877654

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.09  E-value=2.6e-09  Score=96.99  Aligned_cols=134  Identities=18%  Similarity=0.259  Sum_probs=102.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhcCCccccccccchHHHHHHHHHHHHHHHHH
Q 018069          185 CICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQFHSGWEIFCVFYSGLVASAMSF  264 (361)
Q Consensus       185 ~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  264 (361)
                      .++.+.+++++|..++..|+..++.+ +  ...+....+.+.+.|........ ..++..+ ..++..+..+.+.....+
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~~-~--~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~   77 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKEP-D--FLWWALLAHSVLLTPYGLWYLAQ-VGWSRLP-ATFWLLLAISAVANMVYF   77 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCchh-H--HHHHHHHHHHHHHHHHHHHhccc-CCCCCcc-hhhHHHHHHHHHHHHHHH
Confidence            46788999999999999998776643 3  34555566666676666532111 1222222 333444444555678899


Q ss_pred             HHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhcc
Q 018069          265 AVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLG  323 (361)
Q Consensus       265 ~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~  323 (361)
                      .++++++++.+++.++++.+++|+++.+++++++||+++..+++|+.+++.|+++....
T Consensus        78 ~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~  136 (281)
T TIGR03340        78 LGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLS  136 (281)
T ss_pred             HHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcc
Confidence            99999999999999999999999999999999999999999999999999998877643

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.07  E-value=3.6e-09  Score=96.58  Aligned_cols=137  Identities=18%  Similarity=0.127  Sum_probs=113.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHh
Q 018069            6 AKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITLN   85 (361)
Q Consensus         6 ~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   85 (361)
                      ..|.++.++++++|+......|....  -++.....+++.++.+.+.++............+.+.+......++++..+.
T Consensus       149 ~~G~l~~l~a~~~~a~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~  226 (292)
T PRK11272        149 PWGAILILIASASWAFGSVWSSRLPL--PVGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIA  226 (292)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcCC--CcchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHH
Confidence            46999999999999999999998644  2455667788888888877776543221111234567778888888877789


Q ss_pred             HHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHH
Q 018069           86 QGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITL  150 (361)
Q Consensus        86 ~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~  150 (361)
                      +.+|++++++.+++.++++..+.|++++++++++++|+++..      +++|..+.+.|+++...
T Consensus       227 ~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~------~iiG~~lIi~gv~~~~~  285 (292)
T PRK11272        227 ISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPI------EWLALGVIVFAVVLVTL  285 (292)
T ss_pred             HHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHH------HHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999997      99999999999998863

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=99.06  E-value=8.9e-10  Score=90.22  Aligned_cols=212  Identities=17%  Similarity=0.166  Sum_probs=154.1

Q ss_pred             HHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCCCC
Q 018069           83 TLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSA  162 (361)
Q Consensus        83 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~  162 (361)
                      ++.++.|..|++.+++++++.+......|+.+++++++++|+.--      ++++.++++.|++++.. -          
T Consensus        64 t~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~------kIlaailAI~GiVmiay-~----------  126 (290)
T KOG4314|consen   64 TGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGF------KILAAILAIGGIVMIAY-A----------  126 (290)
T ss_pred             ecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhh------hHHHHHHHhCcEEEEEe-c----------
Confidence            467889999999999999999999999999999999999999984      99999999999998863 2          


Q ss_pred             CcccchhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCC--ChhHHHHHHHHHHHH-HHHHHHHhhcCCcc
Q 018069          163 SDQSQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYP--ARLSVVSYSCFFSLM-QFSAIGAYFERDSA  239 (361)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~--~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~  239 (361)
                                  +....+...|+.+++.+++..|+|-++-|+.....+  +.-..+....+.-.+ ...|..+......+
T Consensus       127 ------------DN~~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~VE  194 (290)
T KOG4314|consen  127 ------------DNEHADEIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPALILAFTGVE  194 (290)
T ss_pred             ------------cchhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHHHHHHhchH
Confidence                        223345679999999999999999999998876543  222222222222222 22222222112222


Q ss_pred             ccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHH
Q 018069          240 AWQFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYL  319 (361)
Q Consensus       240 ~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l  319 (361)
                      .++......|..+...+.+. ..-..+.+.++..+.|...++-..........++.++-+-..+.....|..+|+.|.++
T Consensus       195 ~~qsFA~~PWG~l~G~A~L~-lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiL  273 (290)
T KOG4314|consen  195 HLQSFAAAPWGCLCGAAGLS-LAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFIL  273 (290)
T ss_pred             HHHHHhhCCchhhhhHHHHH-HHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHh
Confidence            33322334577777766653 33445668889999998888888888888888897655556788889999999999877


Q ss_pred             hhccc
Q 018069          320 VVLGK  324 (361)
Q Consensus       320 ~~~~~  324 (361)
                      .....
T Consensus       274 iiiP~  278 (290)
T KOG4314|consen  274 IIIPE  278 (290)
T ss_pred             eeccc
Confidence            76543

>TIGR00688 rarD rarD protein

Probab=99.04  E-value=4e-09  Score=94.37  Aligned_cols=136  Identities=13%  Similarity=0.192  Sum_probs=107.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhcCCc---cccccccchH-HHHHHHHHHH
Q 018069          183 LGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDS---AAWQFHSGWE-IFCVFYSGLV  258 (361)
Q Consensus       183 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~~~~~~~-~~~l~~~~~~  258 (361)
                      +|.++.++++++|+...+..|. ..+. ++.++.+++++.+.+.+.+......+..   ...+...... +..+...|++
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~~~-~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   79 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LKPL-PATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL   79 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hccC-CHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence            4889999999999999999997 4455 4899999999999888776654333211   0111111222 3344555554


Q ss_pred             HHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhh
Q 018069          259 ASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVV  321 (361)
Q Consensus       259 ~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~  321 (361)
                       ...++.++++++++.++..++.+.++.|+++.++++++++|+++..+++|.++.++|+.+..
T Consensus        80 -~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~  141 (256)
T TIGR00688        80 -IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI  141 (256)
T ss_pred             -HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence             67889999999999999999999999999999999999999999999999999999987654

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.00  E-value=1.3e-08  Score=95.03  Aligned_cols=135  Identities=9%  Similarity=0.146  Sum_probs=102.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc-HHHHHHHHHHHHHHHHHHHHhhccCC----CCCCHHHHHHHHHHHHHH
Q 018069            7 KLHLAMTIFQFGYAGNHVIMRTALNMGVSKL-VFPLYRNIIAVIVLVPFAYFLEKKDR----PTLTYSFLLQFFLLGLVG   81 (361)
Q Consensus         7 ~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~-~~~~~r~~~~~l~l~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~   81 (361)
                      .|.+++++++++|+...+..|..... .++. ...++...++.+.+.+......+...    ...+.. ....+..++. 
T Consensus       189 lG~~l~l~aa~~wa~~~il~~~~~~~-~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~i~y~~i~-  265 (358)
T PLN00411        189 IGGALLTIQGIFVSVSFILQAHIMSE-YPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDIT-LITIVTMAII-  265 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH-cCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchH-HHHHHHHHHH-
Confidence            37889999999999999999987775 6554 55667776666655544444322111    111222 2223444444 


Q ss_pred             HHHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHH
Q 018069           82 ITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITL  150 (361)
Q Consensus        82 ~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~  150 (361)
                      ..+++.+|++++++.+++.+++..++.|++++++++++++|+++++      +++|.++.+.|+.+...
T Consensus       266 t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~------~~iG~~LIl~Gv~l~~~  328 (358)
T PLN00411        266 TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLG------CLIGGILITLGFYAVMW  328 (358)
T ss_pred             HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHHh
Confidence            3478889999999999999999999999999999999999999997      99999999999999874

>TIGR00803 nst UDP-galactose transporter

Probab=98.94  E-value=7.5e-09  Score=90.56  Aligned_cols=204  Identities=13%  Similarity=0.023  Sum_probs=127.4

Q ss_pred             CcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCc-----------ccCCCCCCcc
Q 018069           97 SPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPI-----------VYRPNSASDQ  165 (361)
Q Consensus        97 ~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~-----------~~~~~~~~~~  165 (361)
                      +........+..++++++..+...+++.+..      ++++.++...|++...+.+.+.           ....++..+.
T Consensus         3 svPa~~~~~s~~l~~v~l~~~~~~~~~~~~~------~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~   76 (222)
T TIGR00803         3 SVPIHIIFKQNNLVLIALGNLLAAGKQVTQL------KILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAK   76 (222)
T ss_pred             cccchHHHHhcchHHHHHhcccccceeeehH------HHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCcc
Confidence            3445566778888889999988888888854      8888888888887643211100           0000000000


Q ss_pred             cchhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCCChh-HHHHHHHHHHHHHHHHHHHhhcCCc-cccc-
Q 018069          166 SQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARL-SVVSYSCFFSLMQFSAIGAYFERDS-AAWQ-  242 (361)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~-  242 (361)
                               .....+...|..+.+.+.++-+...++.++..|+.+... ..+....+.+.+...........+. .... 
T Consensus        77 ---------~~~~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  147 (222)
T TIGR00803        77 ---------TLMFGNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGF  147 (222)
T ss_pred             ---------ccccccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCc
Confidence                     112235668888888888888888888888766543111 1122222222222121111111110 0111 


Q ss_pred             -cccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHH
Q 018069          243 -FHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYL  319 (361)
Q Consensus       243 -~~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l  319 (361)
                       ...+...+.+    ++.+.++..+....+|+.++...+....++++++.+++++++||+++..+++|+.+++.|+++
T Consensus       148 ~~~~~~~~~~~----~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       148 FIGYPTAVWIV----GLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             ccCCchHHHHH----HHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence             0001111222    224566777788999999999999999999999999999999999999999999999998765

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.94  E-value=1.9e-08  Score=91.97  Aligned_cols=133  Identities=11%  Similarity=0.124  Sum_probs=102.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHh
Q 018069            6 AKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITLN   85 (361)
Q Consensus         6 ~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   85 (361)
                      ..|.+++++++++|+...+..|...++ .++....+   ....+.+.+...... ......++..+..++..++. ..++
T Consensus       155 ~~G~~~~l~aa~~~A~~~v~~k~~~~~-~~~~~~~~---~~~~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~~~~-t~~~  228 (295)
T PRK11689        155 PLSYGLAFIGAFIWAAYCNVTRKYARG-KNGITLFF---ILTALALWIKYFLSP-QPAMVFSLPAIIKLLLAAAA-MGFG  228 (295)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhccCC-CCchhHHH---HHHHHHHHHHHHHhc-CccccCCHHHHHHHHHHHHH-HHHH
Confidence            348899999999999999999997664 77765432   223333333222222 11123455667677766654 5679


Q ss_pred             HHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHH
Q 018069           86 QGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITL  150 (361)
Q Consensus        86 ~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~  150 (361)
                      +.+|++++++.+++.++.+.++.|++..++++++++|+++..      +++|.++.+.|+++...
T Consensus       229 ~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~------~~iG~~lI~~gv~~~~~  287 (295)
T PRK11689        229 YAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFS------FWQGVAMVTAGSLLCWL  287 (295)
T ss_pred             HHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHhHHHHhh
Confidence            999999999999999999999999999999999999999997      99999999999988864

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.93  E-value=2.2e-08  Score=79.07  Aligned_cols=122  Identities=18%  Similarity=0.156  Sum_probs=93.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhcCCccccccccchHHHHHHHHHHHHHHH
Q 018069          183 LGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQFHSGWEIFCVFYSGLVASAM  262 (361)
Q Consensus       183 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  262 (361)
                      .|.++.+.+.++.+...++.|+..++.+ +...... .    . ......              ......+++|++++.+
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g-~~~~~~~-~----~-~~~~~~--------------~~p~~~i~lgl~~~~l   60 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLP-LLSHAWD-F----I-AALLAF--------------GLALRAVLLGLAGYAL   60 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCC-CccchhH-H----H-HHHHHH--------------hccHHHHHHHHHHHHH
Confidence            4778999999999999999999888765 2221111 0    0 000000              0012246778888999


Q ss_pred             HHHHHHHHHhcCCceeeeccchhHHHHHHHHHHH--HhcCccchhhHHHHHHHHHHHHHhhcccc
Q 018069          263 SFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATI--ALGEEFYLGGVIGASLIIAGLYLVVLGKD  325 (361)
Q Consensus       263 ~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~--~~ge~~s~~~~iG~~lil~g~~l~~~~~~  325 (361)
                      ++.+|.+++++.+.+.+.++....+++..+.++.  ++||++|+.+++|+++|++|+++....++
T Consensus        61 a~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~  125 (129)
T PRK02971         61 SMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTT  125 (129)
T ss_pred             HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence            9999999999999999999999998888888875  89999999999999999999999875433

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=98.88  E-value=1.3e-09  Score=96.29  Aligned_cols=277  Identities=13%  Similarity=0.145  Sum_probs=164.2

Q ss_pred             CCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHH
Q 018069            1 MVPERAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLV   80 (361)
Q Consensus         1 m~~~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   80 (361)
                      |..+...|.++.+.+.+..|.++.+-|....+ ...   .              ..+......+    ...-+.+..|.+
T Consensus        15 ~~~d~~~G~~LaissS~~Ig~sfilkKkgl~r-~~~---~--------------~~ra~~gg~~----yl~~~~Ww~G~l   72 (335)
T KOG2922|consen   15 MSSDNIIGLVLAISSSIFIGSSFILKKKGLKR-AGA---S--------------GLRAGEGGYG----YLKEPLWWAGML   72 (335)
T ss_pred             hccCceeeeeehhhccEEEeeehhhhHHHHHH-Hhh---h--------------cccccCCCcc----hhhhHHHHHHHH
Confidence            34445678888888888888888888877664 111   0              0000011111    112356778888


Q ss_pred             HHHHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCC
Q 018069           81 GITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPN  160 (361)
Q Consensus        81 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~  160 (361)
                      .+.++..+-|.|..+.|++.++++..+..+..++++..++|||+++.      ..+|+.++++|-.+++. +.|.+.+..
T Consensus        73 tm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~------g~lGc~l~v~Gst~iV~-haP~e~~i~  145 (335)
T KOG2922|consen   73 TMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLL------GILGCVLCVVGSTTIVI-HAPKEQEIE  145 (335)
T ss_pred             HHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHh------hhhheeEEecccEEEEE-ecCcccccc
Confidence            88889999999999999999999999999999999999999999996      99999999999999874 444332211


Q ss_pred             CCCcccchhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCC--ChhHHHHHHHHHHHHHHH-------HHH
Q 018069          161 SASDQSQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYP--ARLSVVSYSCFFSLMQFS-------AIG  231 (361)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~--~~~~~~~~~~~~~~i~~~-------~~~  231 (361)
                      +.....+       -..+..+ +.....+...++  +-....+   +++.  +.+.......+.|.+...       .+-
T Consensus       146 t~~el~~-------~~~~~~F-liy~~~iil~~~--il~~~~~---p~~g~tnilvyi~i~s~iGS~tV~svKalg~aik  212 (335)
T KOG2922|consen  146 SVEEVWE-------LATEPGF-LVYVIIIILIVL--ILIFFYA---PRYGQTNILVYIGICSLIGSLTVMSVKALGIAIK  212 (335)
T ss_pred             cHHHHHH-------HhcCccH-HHHHHHHHHHHH--HHheeec---ccccccceeehhhHhhhhcceeeeeHHHHHHHHH
Confidence            0000000       0001111 111111111111  1111211   1221  223333332222211111       111


Q ss_pred             HhhcCCccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeccchh-HHHHHHHHHHHHhcCcc--ch----
Q 018069          232 AYFERDSAAWQFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPV-QTMLVAIMATIALGEEF--YL----  304 (361)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~-~pv~~~l~~~~~~ge~~--s~----  304 (361)
                      ..+.++.+ .  ..+..|..++.... |........|+|++..+++.++++++. -..++++-+.++|+|--  +.    
T Consensus       213 lt~~g~~q-l--~~~~ty~~~l~~~~-~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~  288 (335)
T KOG2922|consen  213 LTFSGNNQ-L--FYPLTWIFLLVVAT-CVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIA  288 (335)
T ss_pred             HHhcCCcc-c--ccHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHH
Confidence            11222222 1  12233444444444 556777778999999999999998886 66777778889998852  33    


Q ss_pred             hhHHHHHHHHHHHHHhhcc
Q 018069          305 GGVIGASLIIAGLYLVVLG  323 (361)
Q Consensus       305 ~~~iG~~lil~g~~l~~~~  323 (361)
                      ....|+..++.|+++....
T Consensus       289 ~~~~Gf~ti~~G~flL~~~  307 (335)
T KOG2922|consen  289 GELCGFVTIFLGIFLLHRT  307 (335)
T ss_pred             HHHHhHHHhhheeeEeeee
Confidence            3457889999998887533

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.86  E-value=9e-08  Score=87.66  Aligned_cols=137  Identities=15%  Similarity=0.220  Sum_probs=106.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc---HHHHHHHHHHHHHHHHHHHHhhcc-----CCCCCCHHHHHHHHHH
Q 018069            6 AKLHLAMTIFQFGYAGNHVIMRTALNMGVSKL---VFPLYRNIIAVIVLVPFAYFLEKK-----DRPTLTYSFLLQFFLL   77 (361)
Q Consensus         6 ~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~---~~~~~r~~~~~l~l~~~~~~~~~~-----~~~~~~~~~~~~~~~~   77 (361)
                      ..|.++.++++++|+...+..|...++ .++.   ...++..+++.+.+.......+..     .....+...+..++..
T Consensus       142 ~~G~~l~l~aal~~a~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  220 (299)
T PRK11453        142 MLGFMLTLAAAFSWACGNIFNKKIMSH-STRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYL  220 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcc-cCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHH
Confidence            469999999999999999999987653 3322   333444444443333332222211     1123456778888899


Q ss_pred             HHHHHHHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHH
Q 018069           78 GLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVIT  149 (361)
Q Consensus        78 g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~  149 (361)
                      |+++..+.+.+|+.++++.++..++.+..+.|++..++++++++|+++..      +++|..+.++|+.+..
T Consensus       221 ~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~------~~iG~~lI~~gv~l~~  286 (299)
T PRK11453        221 AFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGL------QFLGAVLIMAGLYINV  286 (299)
T ss_pred             HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHH------HHHHHHHHHHHHHHHh
Confidence            98888899999999999999999999999999999999999999999997      9999999999998775

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.82  E-value=5.8e-08  Score=89.09  Aligned_cols=139  Identities=17%  Similarity=0.209  Sum_probs=106.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCccHHHHHHHHHHHHHHHHHHHHhhccCCCC---------CCH-HHHHHH
Q 018069            6 AKLHLAMTIFQFGYAGNHVIMRTALNM-GVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPT---------LTY-SFLLQF   74 (361)
Q Consensus         6 ~~g~l~~l~~~~~~~~~~~~~k~~~~~-~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~---------~~~-~~~~~~   74 (361)
                      ..|.++.++++++|+...+..|...++ +.+|....++....+.+.+.|+....+......         ... ..+...
T Consensus       144 ~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (302)
T TIGR00817       144 WAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVS  223 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHH
Confidence            459999999999999999999987761 389999999999999998888876532111000         000 111112


Q ss_pred             HHHHHHHHHHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHH
Q 018069           75 FLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITL  150 (361)
Q Consensus        75 ~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~  150 (361)
                      +..+.......+.+++.+++++++..+++...+.|++++++++++++|+++.+      +++|..+++.|+.+...
T Consensus       224 ~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~------~~~G~~lil~Gv~l~~~  293 (302)
T TIGR00817       224 LVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQ------QVFGTGIAIAGVFLYSR  293 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchh------HHHHHHHHHHHHHHHHH
Confidence            22232223334467778999999999999999999999999999999999997      99999999999998763

specificities overlap.

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.77  E-value=5.4e-08  Score=75.58  Aligned_cols=107  Identities=13%  Similarity=0.230  Sum_probs=79.8

Q ss_pred             HHHHHHHHHHHHHHHhhcCCccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHH
Q 018069          218 YSCFFSLMQFSAIGAYFERDSAAWQFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIA  297 (361)
Q Consensus       218 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~  297 (361)
                      +....+.+..........+............+...+..|++....++.++.++.++.++ .++.+..++|+++.++++++
T Consensus         3 ~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~   81 (113)
T PF13536_consen    3 FRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLF   81 (113)
T ss_pred             HHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHH
Confidence            34455555555555542222112222223445566666776556899999999999995 88899999999999999999


Q ss_pred             hcCccchhhHHHHHHHHHHHHHhhcccc
Q 018069          298 LGEEFYLGGVIGASLIIAGLYLVVLGKD  325 (361)
Q Consensus       298 ~ge~~s~~~~iG~~lil~g~~l~~~~~~  325 (361)
                      ++|+++..+++|..++++|+.+..+.+.
T Consensus        82 ~~er~~~~~~~a~~l~~~Gv~li~~~~~  109 (113)
T PF13536_consen   82 FKERLSPRRWLAILLILIGVILIAWSDL  109 (113)
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence            9999999999999999999999887654

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.62  E-value=8.5e-07  Score=72.68  Aligned_cols=133  Identities=21%  Similarity=0.332  Sum_probs=110.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc------CCCccHHHHHHHHHHHHHHHHHHHHhhccCCCC----C-------CHHH
Q 018069            8 LHLAMTIFQFGYAGNHVIMRTALNM------GVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPT----L-------TYSF   70 (361)
Q Consensus         8 g~l~~l~~~~~~~~~~~~~k~~~~~------~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~----~-------~~~~   70 (361)
                      |.++++.+.++.+...+..|...++      +.++.++..+....+.+.+.+.....++....+    .       ..+.
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            5678999999999999999998765      589999999999999999999887665433110    0       2244


Q ss_pred             HHHHHHHHHHHHHHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHH
Q 018069           71 LLQFFLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASV  147 (361)
Q Consensus        71 ~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~l  147 (361)
                      +..++..|+++. ..+...+..++++++...+++...-.+.+.++++++++|+++.+      ++.|+.+++.|+++
T Consensus        81 ~~~~~~~~~~~~-~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~------~~~G~~l~~~G~~~  150 (153)
T PF03151_consen   81 IFLLILSGLLAF-LYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPL------QIIGIVLALVGVLL  150 (153)
T ss_pred             HHHHHHHHHHHH-HHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHH------HHHHHHHHHHHHhe
Confidence            455566666654 78889999999999999999999999999999999999999997      99999999999875

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.58  E-value=1.6e-06  Score=81.15  Aligned_cols=138  Identities=13%  Similarity=0.205  Sum_probs=100.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhc------CCCccHHHHHHHHHHHHHHHHHHHHhhccCC-----------CCCCH
Q 018069            6 AKLHLAMTIFQFGYAGNHVIMRTALNM------GVSKLVFPLYRNIIAVIVLVPFAYFLEKKDR-----------PTLTY   68 (361)
Q Consensus         6 ~~g~l~~l~~~~~~~~~~~~~k~~~~~------~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~-----------~~~~~   68 (361)
                      ..|.+++++++++|+...+..|...++      ..++.....+...++.++++|+....+....           .....
T Consensus       193 ~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~  272 (350)
T PTZ00343        193 WLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTK  272 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccch
Confidence            469999999999999999999998763      1456666666678888888888763321100           00011


Q ss_pred             HHHHHHHHHHHHHHHHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHH
Q 018069           69 SFLLQFFLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVI  148 (361)
Q Consensus        69 ~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li  148 (361)
                      .........+.+...+.+.+.+.+++++++...++...+.|+++.++++++++|+++..      +++|.++++.|+.+.
T Consensus       273 ~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~------~~iG~~lii~Gv~lY  346 (350)
T PTZ00343        273 GIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLL------GYLGMAVAILGALLY  346 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchH------hHHHHHHHHHHHHHH
Confidence            11111222222223344445557999999999999999999999999999999999997      999999999999876


Q ss_pred             H
Q 018069          149 T  149 (361)
Q Consensus       149 ~  149 (361)
                      .
T Consensus       347 s  347 (350)
T PTZ00343        347 S  347 (350)
T ss_pred             h
Confidence            4

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.56  E-value=1e-06  Score=77.34  Aligned_cols=140  Identities=13%  Similarity=0.180  Sum_probs=114.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhcCCccccc-cccchHHHHHHHHHHHHH
Q 018069          182 TLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQ-FHSGWEIFCVFYSGLVAS  260 (361)
Q Consensus       182 ~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~  260 (361)
                      ..|+++++.+-+.|+..-.+.|-+ +..+ +.++..+..+++.+....+.....+....++ ..++..+......++. .
T Consensus         6 ~~Gil~~l~Ay~lwG~lp~y~kll-~~~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l-i   82 (293)
T COG2962           6 RKGILLALLAYLLWGLLPLYFKLL-EPLP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL-I   82 (293)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHH-ccCC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH-H
Confidence            479999999999999988887764 4554 7899999999999988877776544333222 2234566666666665 5


Q ss_pred             HHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhccc
Q 018069          261 AMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLGK  324 (361)
Q Consensus       261 ~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~~  324 (361)
                      .....++.+|.......++|.=++++|++.+++|.++++|+++..|++..++..+|+....+..
T Consensus        83 ~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~  146 (293)
T COG2962          83 GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLL  146 (293)
T ss_pred             HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc
Confidence            6899999999999999999999999999999999999999999999999999999988776543

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.56  E-value=1.1e-06  Score=67.59  Aligned_cols=69  Identities=19%  Similarity=0.154  Sum_probs=62.5

Q ss_pred             HHHHHHHHHHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHH
Q 018069           75 FLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVIT  149 (361)
Q Consensus        75 ~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~  149 (361)
                      ...+++++.+++.++..+++..|.+.+..+.++.++++.+++++++|||++++      +++|+.+.++|++++.
T Consensus        40 ~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~------~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         40 LGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPR------HWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHh
Confidence            33444667789999999999999999999999999999999999999999998      9999999999998874

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.56  E-value=2e-06  Score=77.98  Aligned_cols=133  Identities=15%  Similarity=0.167  Sum_probs=106.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHH-HHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHH
Q 018069            6 AKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPL-YRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITL   84 (361)
Q Consensus         6 ~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~-~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   84 (361)
                      ..|.++.++++++|+...+..|... + .++..... +......+...+..... . . .....+.+......|+++...
T Consensus       153 ~~g~~~~l~a~~~~a~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~-~~~~~~~~~~~~~~g~~~~~i  227 (292)
T COG0697         153 LLGLLLALAAALLWALYTALVKRLS-R-LGPVTLALLLQLLLALLLLLLFFLSG-F-G-APILSRAWLLLLYLGVFSTGL  227 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc-C-CChHHHHHHHHHHHHHHHHHHHHhcc-c-c-ccCCHHHHHHHHHHHHHHHHH
Confidence            4799999999999999999999766 3 67777666 44442233333332211 1 1 245567788888889887767


Q ss_pred             hHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHH
Q 018069           85 NQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVIT  149 (361)
Q Consensus        85 ~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~  149 (361)
                      ++.++++++++.+++.++++..+.|++..++++++++|+++.+      +++|+.+.+.|+.+..
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~------~~~G~~li~~g~~l~~  286 (292)
T COG0697         228 AYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPA------QLLGAALVVLGVLLAS  286 (292)
T ss_pred             HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999999997      9999999999998875

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.52  E-value=1.6e-06  Score=78.94  Aligned_cols=128  Identities=17%  Similarity=0.206  Sum_probs=102.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHH----HHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHH
Q 018069            6 AKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNI----IAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVG   81 (361)
Q Consensus         6 ~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   81 (361)
                      .+|.++.+++++.++......|..   +.+|....+.+..    .+.+++.++   + + .++. ..+..+..+..|++.
T Consensus       151 ~~Gi~~~l~sg~~y~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~---~-~-~~~~-~~~~~~~~~~~Gi~~  221 (290)
T TIGR00776       151 KKGILLLLMSTIGYLVYVVVAKAF---GVDGLSVLLPQAIGMVIGGIIFNLGH---I-L-AKPL-KKYAILLNILPGLMW  221 (290)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHc---CCCcceehhHHHHHHHHHHHHHHHHH---h-c-ccch-HHHHHHHHHHHHHHH
Confidence            689999999999999999999975   2789988666655    444444433   1 1 1222 233444455588885


Q ss_pred             HHHhHHHHHhhcc-CCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchh----hHHHHHHHHHHHHH
Q 018069           82 ITLNQGSYIFGLD-NTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKV----LGTLISVGGASVIT  149 (361)
Q Consensus        82 ~~~~~~~~~~al~-~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~----~g~~l~~~Gv~li~  149 (361)
                       .+.+.+|+.+.+ +.+++.++++.+..|+...+.+.+++||+.+++      ++    +|.++.+.|+.++.
T Consensus       222 -~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~------~~~~~~iG~~lIi~~~~l~~  287 (290)
T TIGR00776       222 -GIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKR------EMIAISVGIILIIIAANILG  287 (290)
T ss_pred             -HHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcc------eeehhHHHHHHHHHHHHHHh
Confidence             688999999999 999999999999999999999999999999998      88    99999999988874

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=98.49  E-value=5.4e-08  Score=82.75  Aligned_cols=278  Identities=16%  Similarity=0.137  Sum_probs=187.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhH
Q 018069            7 KLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITLNQ   86 (361)
Q Consensus         7 ~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   86 (361)
                      ..++.+++=++.||..+.+....   |-+|.+...---+-+.++.+.+.+.    ..|..+...+..-+..|++. .+++
T Consensus         2 ~~~liaL~P~l~WGsip~v~~k~---GG~p~qQ~lGtT~GALifaiiv~~~----~~p~~T~~~~iv~~isG~~W-s~GQ   73 (288)
T COG4975           2 MDLLIALLPALGWGSIPLVANKF---GGKPYQQTLGTTLGALIFAIIVFLF----VSPELTLTIFIVGFISGAFW-SFGQ   73 (288)
T ss_pred             hhHHHHHHHHHHhcccceeeeec---CCChhHhhhhccHHHHHHHHHHhee----ecCccchhhHHHHHHhhhHh-hhhh
Confidence            35788899999999988776543   4568776655554444444444433    23344556656666666664 5899


Q ss_pred             HHHHhhccCCCcchhhhhc-cchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCCCCCcc
Q 018069           87 GSYIFGLDNTSPIFASAVE-NAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQ  165 (361)
Q Consensus        87 ~~~~~al~~~~~~~~~~l~-~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~  165 (361)
                      ...+.|+++..++.+.++. .++-+-+.+++.+.+||--+..+.  ....+++++.++|+.+-.. ++++.+.       
T Consensus        74 ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~--IlG~iAliliviG~~lTs~-~~~~nk~-------  143 (288)
T COG4975          74 ANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQI--ILGFIALILIVIGIYLTSK-QDRNNKE-------  143 (288)
T ss_pred             hhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhH--HHHHHHHHHHHHhheEeee-ecccccc-------
Confidence            9999999999999998876 568888999999999996666410  0112345555666665542 3322211       


Q ss_pred             cchhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhcCCcccccccc
Q 018069          166 SQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQFHS  245 (361)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  245 (361)
                               +++.++..+|....+.+.+.|-.|.++.+...  . +.++...-+.....+..+.+... ..+     ...
T Consensus       144 ---------~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~--v-~g~saiLPqAiGMv~~ali~~~~-~~~-----~~~  205 (288)
T COG4975         144 ---------EENPSNLKKGIVILLISTLGYVGYVVLFQLFD--V-DGLSAILPQAIGMVIGALILGFF-KME-----KRF  205 (288)
T ss_pred             ---------ccChHhhhhheeeeeeeccceeeeEeeecccc--c-cchhhhhHHHHHHHHHHHHHhhc-ccc-----cch
Confidence                     33456677899999999999999999876552  3 34555555555545544444442 111     112


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhh----HHHHHHHHHHHHHhh
Q 018069          246 GWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGG----VIGASLIIAGLYLVV  321 (361)
Q Consensus       246 ~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~----~iG~~lil~g~~l~~  321 (361)
                      ....+.-+.-|++ -.++...+..+.++.+.++.=.+.-+..+++.+=|.++++|+=+..+    ++|+++++.|..+..
T Consensus       206 ~K~t~~nii~G~~-Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg  284 (288)
T COG4975         206 NKYTWLNIIPGLI-WAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLG  284 (288)
T ss_pred             HHHHHHHHhhHHH-HHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhh
Confidence            2334444555664 56788888889888888887778888889999999999999987665    468888888866554

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.45  E-value=1.5e-06  Score=66.97  Aligned_cols=67  Identities=15%  Similarity=0.172  Sum_probs=61.3

Q ss_pred             HHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhh
Q 018069          255 SGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVV  321 (361)
Q Consensus       255 ~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~  321 (361)
                      .++++...++.++..++++.+.+.+-.+.++.++++.+++++++||++++.+++|.+++++|+.+..
T Consensus        42 ~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         42 LALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            3445677899999999999999999999999999999999999999999999999999999987764

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.37  E-value=7.6e-06  Score=64.63  Aligned_cols=118  Identities=19%  Similarity=0.082  Sum_probs=90.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhH
Q 018069            7 KLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITLNQ   86 (361)
Q Consensus         7 ~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   86 (361)
                      +++++++++.++-+..-++.|...++ .+..+.... . .   ..+...          .+   ....+..|+....+++
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~-~g~~~~~~~-~-~---~~~~~~----------~~---p~~~i~lgl~~~~la~   62 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSR-LPLLSHAWD-F-I---AALLAF----------GL---ALRAVLLGLAGYALSM   62 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhh-CCCccchhH-H-H---HHHHHH----------hc---cHHHHHHHHHHHHHHH
Confidence            47888999999999999999998875 544332221 1 0   000000          00   1124667777778899


Q ss_pred             HHHHhhccCCCcchhhhhccchhHHHHHHHHH--hhhcccccccccccchhhHHHHHHHHHHHHH
Q 018069           87 GSYIFGLDNTSPIFASAVENAVPAVTFIMAVL--LRIEQIHLTRKDGIAKVLGTLISVGGASVIT  149 (361)
Q Consensus        87 ~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~--~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~  149 (361)
                      .++.+++++.+++.+..+.+..+.++.+.++.  ++||+++++      +++|+.+.++|++++.
T Consensus        63 ~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~------~~iGi~lIi~GV~lv~  121 (129)
T PRK02971         63 LCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLK------KTLGVACIMLGVWLIN  121 (129)
T ss_pred             HHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHhc
Confidence            99999999999999999999999888888885  899999997      9999999999999985

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=98.26  E-value=1.4e-05  Score=68.57  Aligned_cols=135  Identities=11%  Similarity=0.007  Sum_probs=113.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHh
Q 018069            6 AKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITLN   85 (361)
Q Consensus         6 ~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   85 (361)
                      -.|..+.+.+..+|+.+-+..|...+. .+--.-+..-+.+++++.+|+-.......  -..+.....-+..++++..+.
T Consensus       147 p~Gv~~Al~AG~~Wa~YIv~G~r~g~~-~~g~~g~a~gm~vAaviv~Pig~~~ag~~--l~~p~ll~laLgvavlSSalP  223 (292)
T COG5006         147 PVGVALALGAGACWALYIVLGQRAGRA-EHGTAGVAVGMLVAALIVLPIGAAQAGPA--LFSPSLLPLALGVAVLSSALP  223 (292)
T ss_pred             HHHHHHHHHHhHHHHHHHHHcchhccc-CCCchHHHHHHHHHHHHHhhhhhhhcchh--hcChHHHHHHHHHHHHhcccc
Confidence            468899999999999999999987754 56667778889999999999986433211  234566666778888888888


Q ss_pred             HHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHH
Q 018069           86 QGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVIT  149 (361)
Q Consensus        86 ~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~  149 (361)
                      +.+=..+++..|....+++.++.|.+.++.+++++||+++..      ||.++...+.+..-..
T Consensus       224 YsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~------qwlaI~~ViaAsaG~~  281 (292)
T COG5006         224 YSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLI------QWLAIAAVIAASAGST  281 (292)
T ss_pred             hHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHH------HHHHHHHHHHHHhccc
Confidence            999999999999999999999999999999999999999997      9999998888777554

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=98.19  E-value=4.2e-05  Score=70.27  Aligned_cols=145  Identities=14%  Similarity=0.061  Sum_probs=103.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhHhhh-CCChhHHHHHHHHHHHHHHHHHHHhhcCCccccccccchHHHHHHHHHHH
Q 018069          180 NWTLGCICLIGHCLFWSSWIVLQSPVLKK-YPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQFHSGWEIFCVFYSGLV  258 (361)
Q Consensus       180 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  258 (361)
                      +...+.+++-.-++|-+...+.+..+.++ .+.|...+++....-.++..+......+. ..+.......|+..+.++++
T Consensus        10 ~~~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~-~~~~~~~~~~~w~y~lla~~   88 (334)
T PF06027_consen   10 RFWIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGF-KKWLKVLKRPWWKYFLLALL   88 (334)
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhcccc-ccchhhcchhHHHHHHHHHH
Confidence            33445555555555555555555555444 22566777777666666655555532221 12222233556666677775


Q ss_pred             HHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhccccc
Q 018069          259 ASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLGKDE  326 (361)
Q Consensus       259 ~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~~~~  326 (361)
                       =..+.++.+.|+++++.+.+.++.....++++++++++++++.++.+++|+.+.++|+.+....+..
T Consensus        89 -Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~  155 (334)
T PF06027_consen   89 -DVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVL  155 (334)
T ss_pred             -HHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeeccc
Confidence             6789999999999999999999999999999999999999999999999999999999888766543

Some of the sequences in this family are annotated as putative membrane proteins.

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.98  E-value=0.00015  Score=58.10  Aligned_cols=132  Identities=16%  Similarity=0.132  Sum_probs=99.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhcCCccccccccchHHHHHHHHHHHHHHHH
Q 018069          184 GCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQFHSGWEIFCVFYSGLVASAMS  263 (361)
Q Consensus       184 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  263 (361)
                      ..++++.+..+-++......++.++..+++..++..+..+.+.+..+..+.++.  ........+|+..+ -|+ .+...
T Consensus         2 ~~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p~w~~l-GG~-lG~~~   77 (138)
T PF04657_consen    2 YILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRP--SLASLSSVPWWAYL-GGL-LGVFF   77 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCChHHhc-cHH-HHHHH
Confidence            357888999999999999999888876689999999999999998888866553  22222233444443 444 45667


Q ss_pred             HHHHHHHHhcCCceeeeccch-hHHHHHHHHHHH----HhcCccchhhHHHHHHHHHHHHH
Q 018069          264 FAVQIWVIDRGGPMFVSAYLP-VQTMLVAIMATI----ALGEEFYLGGVIGASLIIAGLYL  319 (361)
Q Consensus       264 ~~l~~~a~~~~~~~~~s~~~~-~~pv~~~l~~~~----~~ge~~s~~~~iG~~lil~g~~l  319 (361)
                      ..+.....++.+++....+.. -|.+.+.++|.+    .-++++++.+++|..++++|+++
T Consensus        78 V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   78 VLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            777788899999876665554 488888888886    23467899999999999999763

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.96  E-value=3.3e-05  Score=59.87  Aligned_cols=68  Identities=16%  Similarity=0.322  Sum_probs=57.1

Q ss_pred             HHHHHHHHHHHHHHHhcCCceeeecc-chhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhccc
Q 018069          257 LVASAMSFAVQIWVIDRGGPMFVSAY-LPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLGK  324 (361)
Q Consensus       257 ~~~~~~~~~l~~~a~~~~~~~~~s~~-~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~~  324 (361)
                      +.+..++++++..++|+.+...+=.+ .-+..+.+.++++++|||++++.+++|+.+|++|++......
T Consensus        37 i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         37 LVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence            33467899999999999988766554 357888899999999999999999999999999998875443

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.96  E-value=0.00013  Score=66.92  Aligned_cols=130  Identities=12%  Similarity=0.049  Sum_probs=99.0

Q ss_pred             HHHHHHHHHHHhHhhhCC-C--hhHHHHHHHHHHHHHHHHHHHhhcCCccccccccchHHHHHHHHHHHHHHHHHHHHHH
Q 018069          193 LFWSSWIVLQSPVLKKYP-A--RLSVVSYSCFFSLMQFSAIGAYFERDSAAWQFHSGWEIFCVFYSGLVASAMSFAVQIW  269 (361)
Q Consensus       193 ~~~a~~~v~~~~~~~~~~-~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~  269 (361)
                      .++..+.+.++++.++.. .  +..+++.++....+...+.......+  .   .+...+......++ +..++..+-+.
T Consensus        10 ~~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~-~~~~~~~~~~~   83 (303)
T PF08449_consen   10 GGCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFP--K---SRKIPLKKYAILSF-LFFLASVLSNA   83 (303)
T ss_pred             HHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcccc--C---CCcChHHHHHHHHH-HHHHHHHHHHH
Confidence            344557778888777544 3  67788888888888777766643311  1   12233444455555 46788889999


Q ss_pred             HHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhccccccc
Q 018069          270 VIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLGKDEES  328 (361)
Q Consensus       270 a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~~~~~~  328 (361)
                      ++++.+.....+.....|+..++++.+++|++.+..++++++++.+|+.+....+.+.+
T Consensus        84 al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~  142 (303)
T PF08449_consen   84 ALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSS  142 (303)
T ss_pred             HHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccc
Confidence            99999999999999999999999999999999999999999999999999877654433

; GO: 0055085 transmembrane transport

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=97.85  E-value=7.6e-05  Score=67.99  Aligned_cols=119  Identities=16%  Similarity=0.243  Sum_probs=87.4

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHhHhhhCCC-hhHHHHHHHHHHHHHHHHHHHhhcCCccccccccchHHHHHHHHHH
Q 018069          179 KNWTLGCICLIGHCLFWSSWIVLQSPVLKKYPA-RLSVVSYSCFFSLMQFSAIGAYFERDSAAWQFHSGWEIFCVFYSGL  257 (361)
Q Consensus       179 ~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  257 (361)
                      .+...|..+++.++++.+....++|+..++.+. ...-                    .. ...+......|+.-..   
T Consensus         3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~--------------------~~-~~~~~l~~~~W~~G~~---   58 (300)
T PF05653_consen    3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRA--------------------GS-GGRSYLRRPLWWIGLL---   58 (300)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc--------------------cc-hhhHHHhhHHHHHHHH---
Confidence            356689999999999999999999998766541 0000                    00 0011111122222222   


Q ss_pred             HHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhc
Q 018069          258 VASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVL  322 (361)
Q Consensus       258 ~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~  322 (361)
                       ...++..+...|+...+++.++++..+..++..+++..+++|+++...++|+.+++.|..+...
T Consensus        59 -~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~  122 (300)
T PF05653_consen   59 -LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVI  122 (300)
T ss_pred             -HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEE
Confidence             2345566777899999999999999999999999999999999999999999999999776543

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=97.75  E-value=0.016  Score=52.77  Aligned_cols=303  Identities=13%  Similarity=0.062  Sum_probs=177.5

Q ss_pred             CCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhc-cC----CCCCCHHHHHHHH
Q 018069            1 MVPERAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEK-KD----RPTLTYSFLLQFF   75 (361)
Q Consensus         1 m~~~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~-~~----~~~~~~~~~~~~~   75 (361)
                      |...-..|+++..++.++=|..++-.|..-+  .+-...-....+++. +..|+...... +.    ....+...+....
T Consensus         1 m~~~ii~Gii~h~iGg~~~~sfy~P~kkvk~--WsWEs~Wlv~gi~sw-li~P~~~a~l~ip~~~~i~~~~~~~~l~~~~   77 (344)
T PF06379_consen    1 MNSAIILGIIFHAIGGFASGSFYVPFKKVKG--WSWESYWLVQGIFSW-LIVPWLWALLAIPDFFSIYSATPASTLFWTF   77 (344)
T ss_pred             CCchHHHHHHHHHHHHHHhhhhccchhhcCC--ccHHHHHHHHHHHHH-HHHHHHHHHHhCCcHHHHHHhCChhHHHHHH
Confidence            5556678999999999999999888886533  443333333444444 34444432211 11    1233445666677


Q ss_pred             HHHHHHHHHhHHHHHhhccCCCcchhh-hhccchhHHHHHHHHHhhhccc-ccccccccchhhHHHHHHHHHHHHHHhcC
Q 018069           76 LLGLVGITLNQGSYIFGLDNTSPIFAS-AVENAVPAVTFIMAVLLRIEQI-HLTRKDGIAKVLGTLISVGGASVITLYKG  153 (361)
Q Consensus        76 ~~g~~~~~~~~~~~~~al~~~~~~~~~-~l~~~~pi~~~lla~~~l~e~~-~~~~~~~~~~~~g~~l~~~Gv~li~~~~~  153 (361)
                      +.|++-. ++...|=.+++|+..+... +...+...+-.++-.++.++-- -..++-.+..++|++++++|+.++-. -|
T Consensus        78 l~G~lWG-IGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~-AG  155 (344)
T PF06379_consen   78 LFGVLWG-IGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGK-AG  155 (344)
T ss_pred             HHHHHHh-cchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhH-HH
Confidence            7888754 7888889999998888764 5556677777777666644210 01122345689999999999999853 22


Q ss_pred             C-cccCCCCCCcccchhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhHh-------hhCCChh----HHHHHHHH
Q 018069          154 P-IVYRPNSASDQSQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVL-------KKYPARL----SVVSYSCF  221 (361)
Q Consensus       154 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~-------~~~~~~~----~~~~~~~~  221 (361)
                      . .+++.+      .       +..+.+..+|.+.++.+.+..|.+++-.....       +...+++    ......+.
T Consensus       156 ~~Ke~~~~------~-------~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~  222 (344)
T PF06379_consen  156 SMKEKELG------E-------EAKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVVLW  222 (344)
T ss_pred             Hhhhhhhc------c-------chhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhhhh
Confidence            1 111110      0       22345677999999999998888777643211       1011122    22334455


Q ss_pred             HHHHHHHHHHHhhc---CCcc---cccccc---chHHHHHHHHHHHHHHHHHHHHHHHHhcCCc----eeeeccchhHHH
Q 018069          222 FSLMQFSAIGAYFE---RDSA---AWQFHS---GWEIFCVFYSGLVASAMSFAVQIWVIDRGGP----MFVSAYLPVQTM  288 (361)
Q Consensus       222 ~~~i~~~~~~~~~~---~~~~---~~~~~~---~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~----~~~s~~~~~~pv  288 (361)
                      .+.+.....+++..   ++..   +.....   ......-+..|+ .-...+++|..+-.+.++    +--.+.+.+..+
T Consensus       223 GGf~tN~~yc~~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~-lWy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl  301 (344)
T PF06379_consen  223 GGFITNLIYCLILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGV-LWYSQFFFYGMGESKLGASGPFSSWAIHMALIVL  301 (344)
T ss_pred             hHHHHHHHHHHHHHhhcCCCccccccccccchhHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHH
Confidence            55666666665431   1211   111111   122222233333 245566666666666553    444566778888


Q ss_pred             HHHHHHHHHhcCc------cchhhHHHHHHHHHHHHHhhcc
Q 018069          289 LVAIMATIALGEE------FYLGGVIGASLIIAGLYLVVLG  323 (361)
Q Consensus       289 ~~~l~~~~~~ge~------~s~~~~iG~~lil~g~~l~~~~  323 (361)
                      ++-++|. .++|.      +-..-++|+.+++.+++++-+.
T Consensus       302 ~snvwGl-~lkEWKg~s~kt~~vl~~G~~vlI~s~~ivG~G  341 (344)
T PF06379_consen  302 FSNVWGL-ILKEWKGASKKTIRVLVLGIAVLILSVVIVGYG  341 (344)
T ss_pred             HHHHHHH-HHHHhccCCcccHHHHHHHHHHHHHHHHHHhcc
Confidence            9999995 47773      3344578999888888776543

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.72  E-value=0.00019  Score=54.87  Aligned_cols=65  Identities=22%  Similarity=0.215  Sum_probs=55.1

Q ss_pred             HHHHHHHHHHHHHhcCCceeeecc-chhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhcc
Q 018069          259 ASAMSFAVQIWVIDRGGPMFVSAY-LPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLG  323 (361)
Q Consensus       259 ~~~~~~~l~~~a~~~~~~~~~s~~-~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~  323 (361)
                      +...+++++..++|+.+...+=.+ .-+..+...++++++|||++++.+++|+.+|+.|+++....
T Consensus        39 ~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~  104 (110)
T PRK09541         39 CYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            457888999999999888665444 44678888999999999999999999999999999988643

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=97.68  E-value=0.00051  Score=60.87  Aligned_cols=116  Identities=19%  Similarity=0.110  Sum_probs=86.0

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHH
Q 018069            4 ERAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGIT   83 (361)
Q Consensus         4 ~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   83 (361)
                      +..|+++.++++.+.+.......|..   +.+++...+=+.+...+.-..+....++    +...|..++-+.-|++. .
T Consensus       135 ~~~kgi~~Ll~stigy~~Y~~~~~~~---~~~~~~~~lPqaiGm~i~a~i~~~~~~~----~~~~k~~~~nil~G~~w-~  206 (269)
T PF06800_consen  135 NMKKGILALLISTIGYWIYSVIPKAF---HVSGWSAFLPQAIGMLIGAFIFNLFSKK----PFFEKKSWKNILTGLIW-G  206 (269)
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHHhc---CCChhHhHHHHHHHHHHHHHHHhhcccc----cccccchHHhhHHHHHH-H
Confidence            34689999999999999999988863   3788887665544333333333332222    12223334456667764 5


Q ss_pred             HhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccc
Q 018069           84 LNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLT  127 (361)
Q Consensus        84 ~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~  127 (361)
                      .++.+++.+.+....+.+-.+..+.+++..+-+.+++||+-++|
T Consensus       207 ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~k  250 (269)
T PF06800_consen  207 IGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKK  250 (269)
T ss_pred             HHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchh
Confidence            88999999999999999999999999999999999999998776

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=97.66  E-value=1.2e-05  Score=69.58  Aligned_cols=137  Identities=15%  Similarity=0.169  Sum_probs=100.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhcCCccccccccchHHHHHHHHHHHH
Q 018069          180 NWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQFHSGWEIFCVFYSGLVA  259 (361)
Q Consensus       180 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  259 (361)
                      ...+|..+...+ ..+...++..++.....  |.......+..-..+..|..++.-...  +.+...+.|  ++.=|+. 
T Consensus        35 ~p~~gl~l~~vs-~ff~~~~vv~t~~~e~~--p~e~a~~r~l~~mlit~pcliy~~~~v--~gp~g~R~~--LiLRg~m-  106 (346)
T KOG4510|consen   35 KPNLGLLLLTVS-YFFNSCMVVSTKVLEND--PMELASFRLLVRMLITYPCLIYYMQPV--IGPEGKRKW--LILRGFM-  106 (346)
T ss_pred             CCccCceehhhH-HHHhhHHHhhhhhhccC--hhHhhhhhhhhehhhhheEEEEEeeee--ecCCCcEEE--EEeehhh-
Confidence            456788888888 88888888888876554  555555666666666666555422221  111111222  2333443 


Q ss_pred             HHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhccc
Q 018069          260 SAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLGK  324 (361)
Q Consensus       260 ~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~~  324 (361)
                      +..+..+.++++++.+-+.+.++.+..|+++.+++|.+++|+.|....+|..+.+.|+++..+..
T Consensus       107 G~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPp  171 (346)
T KOG4510|consen  107 GFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPP  171 (346)
T ss_pred             hhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCC
Confidence            45677788899999999999999999999999999999999999999999999999998887543

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.53  E-value=0.0016  Score=49.64  Aligned_cols=62  Identities=11%  Similarity=0.071  Sum_probs=55.2

Q ss_pred             HHHHhHHHHHhhccCCCcchh-hhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHH
Q 018069           81 GITLNQGSYIFGLDNTSPIFA-SAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVI  148 (361)
Q Consensus        81 ~~~~~~~~~~~al~~~~~~~~-~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li  148 (361)
                      ++.+++.+...+++++|.+.+ ++......+.+.+++.+++||++++.      +++|+.+.+.|++.+
T Consensus        44 ~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~------~~~gi~lIi~GVi~l  106 (109)
T PRK10650         44 AVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRK------GWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHh
Confidence            345788889999999999998 56667889999999999999999997      999999999999876

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=97.49  E-value=0.0003  Score=53.64  Aligned_cols=110  Identities=12%  Similarity=0.119  Sum_probs=76.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhHHHHHhh
Q 018069           13 TIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITLNQGSYIFG   92 (361)
Q Consensus        13 l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a   92 (361)
                      ++.+++||.++++.|..... .++..-.. |..-....    .         -.++++   .+  ++.-.-.+...|++.
T Consensus         2 l~Vg~~WG~Tnpfik~g~~~-~~~~~~~~-~~~~~~~~----L---------l~n~~y---~i--pf~lNq~GSv~f~~~   61 (113)
T PF10639_consen    2 LLVGILWGCTNPFIKRGSSG-LEKVKASL-QLLQEIKF----L---------LLNPKY---II--PFLLNQSGSVLFFLL   61 (113)
T ss_pred             eeehHHhcCchHHHHHHHhh-cCCccchH-HHHHHHHH----H---------HHhHHH---HH--HHHHHHHHHHHHHHH
Confidence            45678999999999998874 65555431 21111111    0         112232   22  222233677889999


Q ss_pred             ccCCCcchhhhhc-cchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHH
Q 018069           93 LDNTSPIFASAVE-NAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVI  148 (361)
Q Consensus        93 l~~~~~~~~~~l~-~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li  148 (361)
                      +...+.+.+.++. ++.=++|++.++++.+|..+++      .++|+.+.+.|+.++
T Consensus        62 L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~------~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   62 LGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRR------TWLGMALILAGVALC  112 (113)
T ss_pred             HhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchh------HHHHHHHHHcCeeee
Confidence            9999999999885 7788999999988877777776      899999999998764

Many members are annotated as potential transmembrane proteins.

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.47  E-value=0.0024  Score=51.18  Aligned_cols=138  Identities=12%  Similarity=0.100  Sum_probs=94.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhcCCccccccccchHHHHHHHHHHHHHH
Q 018069          182 TLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQFHSGWEIFCVFYSGLVASA  261 (361)
Q Consensus       182 ~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  261 (361)
                      ....+.++.+.++-.+..-...++.+...+|+...+..+..+.+.+..+.+..++.. .+.......||..+ -|++ ..
T Consensus         4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~-~~a~~~~~pwW~~~-GG~l-Ga   80 (150)
T COG3238           4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHP-GLAAVASAPWWAWI-GGLL-GA   80 (150)
T ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCC-chhhccCCchHHHH-ccch-hh
Confidence            366788999999999999998888887777899999999999999998888744332 22222223344332 2232 22


Q ss_pred             HHHHHHHHHHhcCCc-eeeeccchhHHHHHHHHHHHHhc----CccchhhHHHHHHHHHHHHHhhc
Q 018069          262 MSFAVQIWVIDRGGP-MFVSAYLPVQTMLVAIMATIALG----EEFYLGGVIGASLIIAGLYLVVL  322 (361)
Q Consensus       262 ~~~~l~~~a~~~~~~-~~~s~~~~~~pv~~~l~~~~~~g----e~~s~~~~iG~~lil~g~~l~~~  322 (361)
                      +-...-.....+.++ ........-+.+.++++|.+=+.    .+++...++|++++++|+++...
T Consensus        81 ~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~  146 (150)
T COG3238          81 IFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARR  146 (150)
T ss_pred             hhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcc
Confidence            222233344555555 44555666688888888876554    56899999999999999655543

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.43  E-value=0.0022  Score=48.84  Aligned_cols=63  Identities=16%  Similarity=0.182  Sum_probs=53.0

Q ss_pred             HHHHHHHHHHHHHhcCCceee-eccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhh
Q 018069          259 ASAMSFAVQIWVIDRGGPMFV-SAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVV  321 (361)
Q Consensus       259 ~~~~~~~l~~~a~~~~~~~~~-s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~  321 (361)
                      +..+++++...++|+.+...+ +...-+..+.+.+.++++|||++++.+++|+.+|+.|+....
T Consensus        44 ~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         44 AVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            457899999999999887543 444456778889999999999999999999999999988763

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.42  E-value=0.00063  Score=51.02  Aligned_cols=65  Identities=20%  Similarity=0.285  Sum_probs=54.5

Q ss_pred             HHHHHHHHHHHHHhcCCcee-eeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhcc
Q 018069          259 ASAMSFAVQIWVIDRGGPMF-VSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLG  323 (361)
Q Consensus       259 ~~~~~~~l~~~a~~~~~~~~-~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~  323 (361)
                      +...+|.++..++|+.+... .++..-...+.+.+.++++|||++++.+++|..++++|++.....
T Consensus        39 ~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~  104 (106)
T COG2076          39 GYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG  104 (106)
T ss_pred             HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence            34678999999999988743 355566678888999999999999999999999999999887643

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.40  E-value=0.00054  Score=53.14  Aligned_cols=67  Identities=27%  Similarity=0.206  Sum_probs=58.6

Q ss_pred             HHHHHHHhHHHHHhhccCCCcchhhhh-ccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHH
Q 018069           78 GLVGITLNQGSYIFGLDNTSPIFASAV-ENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITL  150 (361)
Q Consensus        78 g~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~  150 (361)
                      .+..+.+++.++..++++.|.+.+-.+ ....-+.+.+++.++++|++++.      +++|+.+.++|++.+-.
T Consensus        36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~------~~~gi~lIi~GVi~l~l  103 (120)
T PRK10452         36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLM------KIAGLTTLVAGIVLIKS  103 (120)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHhhc
Confidence            344456789999999999999999655 47899999999999999999997      99999999999988853

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.37  E-value=0.0027  Score=50.87  Aligned_cols=130  Identities=15%  Similarity=0.128  Sum_probs=94.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCC-ccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 018069            9 HLAMTIFQFGYAGNHVIMRTALNMGVS-KLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITLNQG   87 (361)
Q Consensus         9 ~l~~l~~~~~~~~~~~~~k~~~~~~~~-p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   87 (361)
                      .++.+++..+-+....+.....+. .. |+..+++-+..+.+++..+....+++..+..+ +.-++...-|+++. ....
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~~~-~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~-~~p~w~~lGG~lG~-~~V~   79 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLGKA-LGSPLVASFISFGVGFILLLIILLITGRPSLASLS-SVPWWAYLGGLLGV-FFVL   79 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH-hCccHHHHHHHHHHHHHHHHHHHHHhcccccchhc-cCChHHhccHHHHH-HHHH
Confidence            456677777777777777776665 55 99999999999999988888776654332222 22344455777765 6777


Q ss_pred             HHHhhccCCCcchhhhhccc-hhHHHHHHHHH----hhhcccccccccccchhhHHHHHHHHHHH
Q 018069           88 SYIFGLDNTSPIFASAVENA-VPAVTFIMAVL----LRIEQIHLTRKDGIAKVLGTLISVGGASV  147 (361)
Q Consensus        88 ~~~~al~~~~~~~~~~l~~~-~pi~~~lla~~----~l~e~~~~~~~~~~~~~~g~~l~~~Gv~l  147 (361)
                      +..+.....+++.+..+.-. +-+...++..+    .-|++++++      +.+|+.+.++|+.+
T Consensus        80 ~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~------r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   80 SNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLR------RILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHH------HHHHHHHHHHHHhC
Confidence            77888999999988776655 56666666665    346777776      99999999999863

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.36  E-value=0.00076  Score=51.61  Aligned_cols=67  Identities=13%  Similarity=0.116  Sum_probs=57.8

Q ss_pred             HHHHHHHhHHHHHhhccCCCcchhhhh-ccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHH
Q 018069           78 GLVGITLNQGSYIFGLDNTSPIFASAV-ENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITL  150 (361)
Q Consensus        78 g~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~  150 (361)
                      .++++.+++.++..++++.|.+.+-.+ ....-+.+.+++++++||++++.      +++|+.+.++|++++-.
T Consensus        36 ~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~------~~~gi~lIi~GVi~l~l  103 (110)
T PRK09541         36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLP------AIIGMMLICAGVLVINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHhc
Confidence            344456788888999999999998655 56888999999999999999997      99999999999999853

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.36  E-value=0.00083  Score=50.88  Aligned_cols=64  Identities=22%  Similarity=0.290  Sum_probs=54.1

Q ss_pred             HHHHHHHHHHHHHhcCCceee-eccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhc
Q 018069          259 ASAMSFAVQIWVIDRGGPMFV-SAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVL  322 (361)
Q Consensus       259 ~~~~~~~l~~~a~~~~~~~~~-s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~  322 (361)
                      +...+++++..++|+.+...+ +...-+..+.+.+.++++|||++++.+++|+.++++|++....
T Consensus        38 ~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l  102 (105)
T PRK11431         38 AMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL  102 (105)
T ss_pred             HHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence            457899999999999887543 4445577888899999999999999999999999999888753

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.35  E-value=0.0024  Score=58.93  Aligned_cols=137  Identities=17%  Similarity=0.117  Sum_probs=93.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHH--H--HHHhhcCCc-cccccccchHHHHHHH
Q 018069          180 NWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFS--A--IGAYFERDS-AAWQFHSGWEIFCVFY  254 (361)
Q Consensus       180 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~--~~~~~~~~~-~~~~~~~~~~~~~l~~  254 (361)
                      +...|+++.+++++|++.+.+-.|+ .|+.+  ++.. |- ..+.+..+  |  ...+..++. ......+...+..-..
T Consensus         4 ~~~~G~~~~~i~~~~~GS~~~p~K~-~k~w~--wE~~-W~-v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l   78 (345)
T PRK13499          4 AIILGIIWHLIGGASSGSFYAPFKK-VKKWS--WETM-WS-VGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFL   78 (345)
T ss_pred             hhHHHHHHHHHHHHHhhcccccccc-cCCCc--hhHH-HH-HHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHH
Confidence            4568999999999999999999888 55543  3333 22 11211111  1  111112221 1223334555666666


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCceeeeccch-hHHHHHHHHHHHHhcCcc---c----hhhHHHHHHHHHHHHHhhc
Q 018069          255 SGLVASAMSFAVQIWVIDRGGPMFVSAYLP-VQTMLVAIMATIALGEEF---Y----LGGVIGASLIIAGLYLVVL  322 (361)
Q Consensus       255 ~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~-~~pv~~~l~~~~~~ge~~---s----~~~~iG~~lil~g~~l~~~  322 (361)
                      .|++ -.+++..+..++|+.+.+...++.. ++-+++.+++.+++||-.   +    ....+|.+++++|+.+..+
T Consensus        79 ~G~~-W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~  153 (345)
T PRK13499         79 FGAL-WGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGR  153 (345)
T ss_pred             HHHH-HHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHH
Confidence            6775 6789999999999999988887765 478899999999999755   2    2356899999999999877

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.32  E-value=0.00075  Score=50.64  Aligned_cols=63  Identities=22%  Similarity=0.160  Sum_probs=56.7

Q ss_pred             HHHHhHHHHHhhccCCCcchh-hhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHH
Q 018069           81 GITLNQGSYIFGLDNTSPIFA-SAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVIT  149 (361)
Q Consensus        81 ~~~~~~~~~~~al~~~~~~~~-~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~  149 (361)
                      ++..++.+.-.+++++|.+.+ ++......+.+.+.++++++|+++..      +++++.+.++|++.+-
T Consensus        39 ~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~------~~~gl~LiiaGvi~Lk  102 (106)
T COG2076          39 GYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLI------KLLGLALILAGVIGLK  102 (106)
T ss_pred             HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHH------HHHHHHHHHHHHHHhh
Confidence            345788889999999999988 67778899999999999999999997      9999999999999874

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.24  E-value=0.0013  Score=49.78  Aligned_cols=65  Identities=11%  Similarity=0.090  Sum_probs=57.0

Q ss_pred             HHHHHHhHHHHHhhccCCCcchh-hhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHH
Q 018069           79 LVGITLNQGSYIFGLDNTSPIFA-SAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVIT  149 (361)
Q Consensus        79 ~~~~~~~~~~~~~al~~~~~~~~-~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~  149 (361)
                      ..++..++.+...+++..|.+.+ ++......+.+.+++.+++||++++.      +++|+.+.+.|++.+-
T Consensus        36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~------~~~gi~lIi~GVv~l~  101 (105)
T PRK11431         36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPA------RLLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHhhh
Confidence            33455788889999999999998 56667899999999999999999997      9999999999999874

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=97.23  E-value=0.001  Score=60.57  Aligned_cols=137  Identities=18%  Similarity=0.248  Sum_probs=109.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCccHHHHHHHHHHHHHHH-HHHHHhhccCC---C--CCCHHHHHHHH
Q 018069            5 RAKLHLAMTIFQFGYAGNHVIMRTALN---MGVSKLVFPLYRNIIAVIVLV-PFAYFLEKKDR---P--TLTYSFLLQFF   75 (361)
Q Consensus         5 ~~~g~l~~l~~~~~~~~~~~~~k~~~~---~~~~p~~~~~~r~~~~~l~l~-~~~~~~~~~~~---~--~~~~~~~~~~~   75 (361)
                      +..|....+.+.+..+...++.|....   +.++++.......-++.+.++ |+....+....   .  ..+... ....
T Consensus       161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~-~~~~  239 (316)
T KOG1441|consen  161 NLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTF-LILL  239 (316)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhh-HHHH
Confidence            467999999999999999999999884   248999999888888888888 88766544322   1  112222 2333


Q ss_pred             HHHHHHHHHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHH
Q 018069           76 LLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVIT  149 (361)
Q Consensus        76 ~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~  149 (361)
                      +..++.. ..|...|..+..+++-..++...+--+++...++++++|++++.      +..|..++++|+.+-.
T Consensus       240 ~~sv~~f-~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~------n~~G~~iai~Gv~~Y~  306 (316)
T KOG1441|consen  240 LNSVLAF-LLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFL------NALGYAIAILGVFLYS  306 (316)
T ss_pred             HHHHHHH-HHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchh------hHHHHHHHHHHHHHHH
Confidence            4445544 66778889999999999999999999999999999999999996      9999999999999865

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=97.06  E-value=0.0042  Score=56.71  Aligned_cols=141  Identities=13%  Similarity=0.148  Sum_probs=109.9

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCccHHHHHHHHHHHHHHHHHHHHhhc---cCCCCCCHHHHHHHHHH
Q 018069            4 ERAKLHLAMTIFQFGYAGNHVIMRTALNMG---VSKLVFPLYRNIIAVIVLVPFAYFLEK---KDRPTLTYSFLLQFFLL   77 (361)
Q Consensus         4 ~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~---~~p~~~~~~r~~~~~l~l~~~~~~~~~---~~~~~~~~~~~~~~~~~   77 (361)
                      +...|.++.+++++++|...++.|.-.+++   +|--.+-.+-.++..++++|..+....   +...-.+..+...+++.
T Consensus       244 ~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~~  323 (416)
T KOG2765|consen  244 RPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVVFN  323 (416)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeeeHh
Confidence            347899999999999999999999877652   333334445556677777766665443   22222334455567888


Q ss_pred             HHHHHHHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHH
Q 018069           78 GLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITL  150 (361)
Q Consensus        78 g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~  150 (361)
                      ++++..++-++|..|.-.+++-.+++-.+++....++.-.++.+.++++.      .++|.+..++|-+++..
T Consensus       324 ~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~------~iiGsi~Ifv~Fv~vn~  390 (416)
T KOG2765|consen  324 NLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSAL------YIIGSIPIFVGFVIVNI  390 (416)
T ss_pred             hHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHhheec
Confidence            89999999999999999999999999999999999999999977777774      99999999999888864

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=97.05  E-value=0.0016  Score=57.52  Aligned_cols=80  Identities=15%  Similarity=0.189  Sum_probs=68.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhccccc
Q 018069          247 WEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLGKDE  326 (361)
Q Consensus       247 ~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~~~~  326 (361)
                      .+.+.+..-++ ...+...+.+.++++.+|+...++..+..++++++++++++.+++..||++..++..|+.+.......
T Consensus        15 ~~~~~~~vPA~-lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~   93 (244)
T PF04142_consen   15 KDTLKLAVPAL-LYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ   93 (244)
T ss_pred             HHHHHHHHHHH-HHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence            34444445555 36788899999999999999999999999999999999999999999999999999999988765544


Q ss_pred             c
Q 018069          327 E  327 (361)
Q Consensus       327 ~  327 (361)
                      .
T Consensus        94 ~   94 (244)
T PF04142_consen   94 S   94 (244)
T ss_pred             c
Confidence            3

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=97.03  E-value=0.0041  Score=46.19  Aligned_cols=55  Identities=18%  Similarity=0.203  Sum_probs=33.8

Q ss_pred             HHHHHHHHHHHHHhcCCceeeecc-chhHHHHHHHHHHHHhcCccchhhHHHHHHH
Q 018069          259 ASAMSFAVQIWVIDRGGPMFVSAY-LPVQTMLVAIMATIALGEEFYLGGVIGASLI  313 (361)
Q Consensus       259 ~~~~~~~l~~~a~~~~~~~~~s~~-~~~~pv~~~l~~~~~~ge~~s~~~~iG~~li  313 (361)
                      +...++.++.+++|+.+.+.+=.+ .-+..+...+.+.+++||++|+.+++|+.+|
T Consensus        38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            467889999999999999887444 4588899999999999999999999999876

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.66  E-value=0.013  Score=43.55  Aligned_cols=54  Identities=19%  Similarity=0.081  Sum_probs=32.9

Q ss_pred             HHHHhHHHHHhhccCCCcchhh-hhccchhHHHHHHHHHhhhcccccccccccchhhHHHH
Q 018069           81 GITLNQGSYIFGLDNTSPIFAS-AVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLI  140 (361)
Q Consensus        81 ~~~~~~~~~~~al~~~~~~~~~-~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l  140 (361)
                      +...+..++..++++.|.+.+- +...+..+.+.+++.+++||+++++      ++.|+.+
T Consensus        38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~------~~~gi~l   92 (93)
T PF00893_consen   38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLS------KWLGIGL   92 (93)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------------HHHHHH
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHhheee
Confidence            4567888999999999999995 4557899999999999999999997      8988875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=96.55  E-value=0.02  Score=50.57  Aligned_cols=189  Identities=11%  Similarity=0.007  Sum_probs=116.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 018069            8 LHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITLNQG   87 (361)
Q Consensus         8 g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   87 (361)
                      |++..+++++++|.+++-.|..-.  -|++.+-++.+....+.-+.......   .+    +.+.+.++-|.+- +.++.
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~~~--gDg~~fQw~~~~~i~~~g~~v~~~~~---~p----~f~p~amlgG~lW-~~gN~   70 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKFDT--GDGFFFQWVMCSGIFLVGLVVNLILG---FP----PFYPWAMLGGALW-ATGNI   70 (254)
T ss_pred             CchhHHHHHHHhcccceeeEeccC--CCcHHHHHHHHHHHHHHHHHHHHhcC---CC----cceeHHHhhhhhh-hcCce
Confidence            567889999999999999996543  58888877777666666555554422   11    2334455556664 57888


Q ss_pred             HHHhhccCCCcchhhhhccchhHHH-HHHHHH-hhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCC------
Q 018069           88 SYIFGLDNTSPIFASAVENAVPAVT-FIMAVL-LRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRP------  159 (361)
Q Consensus        88 ~~~~al~~~~~~~~~~l~~~~pi~~-~lla~~-~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~------  159 (361)
                      +-.-.++....+....+-++.-+++ -..+++ +++++...- +...+..+|++++++|..+....+.+...+.      
T Consensus        71 ~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~-~~~~Ln~~G~~l~~~~~~~f~fik~~~~~~~~~~~~~  149 (254)
T PF07857_consen   71 LVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVP-SSPWLNYIGVALVLVSGIIFSFIKSEEKEPKKSSEET  149 (254)
T ss_pred             eehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceecccccccc-chhHHHHHHHHHHHHHHHheeeecCCCCCcccccccc
Confidence            8889999999999988887744433 333433 444433221 2234678899999999888764343321111      


Q ss_pred             --CCC-CcccchhhhhccCc--------ccchhHHHHHHHHHHHHHHHHHHHHHHhHhhh
Q 018069          160 --NSA-SDQSQSQMLLLGDT--------KEKNWTLGCICLIGHCLFWSSWIVLQSPVLKK  208 (361)
Q Consensus       160 --~~~-~~~~~~~~~~~~~~--------~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~  208 (361)
                        ..+ ..+.. .+..+.++        ...+...|+.+++++++.|+...+=.....++
T Consensus       150 ~~~~~~~~~~~-~~~~~~~~~S~vd~l~~~~~RivG~~LAv~aGvlyGs~fvPv~Yi~~~  208 (254)
T PF07857_consen  150 PLSIEDVIEIE-DDSENSEDSSWVDELSPRKKRIVGIILAVFAGVLYGSNFVPVIYIQDH  208 (254)
T ss_pred             ccccccccccc-cccccccccccccccccccchhHhHHHHHHHHHHHhcccchHHHHHhC
Confidence              000 00110 00000001        11246789999999999999988777665444

The region concerned is approximately 280 residues long.

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=96.50  E-value=0.003  Score=54.40  Aligned_cols=133  Identities=14%  Similarity=0.058  Sum_probs=94.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhcCCccccccccchHHHHHHHHHHHHHHH
Q 018069          183 LGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQFHSGWEIFCVFYSGLVASAM  262 (361)
Q Consensus       183 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  262 (361)
                      .+.+++++=++.|+..-....|.   ..+|.+.+.-+.+.+.++.+.+.++..+.      .+...+..-+..|.+ -.+
T Consensus         2 ~~~liaL~P~l~WGsip~v~~k~---GG~p~qQ~lGtT~GALifaiiv~~~~~p~------~T~~~~iv~~isG~~-Ws~   71 (288)
T COG4975           2 MDLLIALLPALGWGSIPLVANKF---GGKPYQQTLGTTLGALIFAIIVFLFVSPE------LTLTIFIVGFISGAF-WSF   71 (288)
T ss_pred             hhHHHHHHHHHHhcccceeeeec---CCChhHhhhhccHHHHHHHHHHheeecCc------cchhhHHHHHHhhhH-hhh
Confidence            35678888899999877765443   22466666666666766666666642211      122344445556664 568


Q ss_pred             HHHHHHHHHhcCCceeeeccchh-HHHHHHHHHHHHhcCccchhhHH----HHHHHHHHHHHhhcccc
Q 018069          263 SFAVQIWVIDRGGPMFVSAYLPV-QTMLVAIMATIALGEEFYLGGVI----GASLIIAGLYLVVLGKD  325 (361)
Q Consensus       263 ~~~l~~~a~~~~~~~~~s~~~~~-~pv~~~l~~~~~~ge~~s~~~~i----G~~lil~g~~l~~~~~~  325 (361)
                      ++..++++++..+.+++.++..- +-+-+.+++.+.|+|..+..+.+    ..++++.|+++..++++
T Consensus        72 GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~  139 (288)
T COG4975          72 GQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDR  139 (288)
T ss_pred             hhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecc
Confidence            99999999999999999998775 78888999999999999887753    45667778777766554

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=96.14  E-value=0.32  Score=44.56  Aligned_cols=142  Identities=15%  Similarity=0.068  Sum_probs=95.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhHhhhCC---ChhHHHHHHHHHHHHHHHHHHHhhcCC-ccccc-------cccchHHHH
Q 018069          183 LGCICLIGHCLFWSSWIVLQSPVLKKYP---ARLSVVSYSCFFSLMQFSAIGAYFERD-SAAWQ-------FHSGWEIFC  251 (361)
Q Consensus       183 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~-------~~~~~~~~~  251 (361)
                      .=.+..+...+-++......|...++..   .+.+..+..-..-.++.....+..+.. ...+.       ...+.+...
T Consensus        15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk   94 (345)
T KOG2234|consen   15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK   94 (345)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence            3445555556666666666666444332   345666666666666666665543211 01110       011112333


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhcccc
Q 018069          252 VFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLGKD  325 (361)
Q Consensus       252 l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~~~  325 (361)
                      +..-+. ..++...+++.++.+.+|+...+.+.+..+.++++..++++++++..||...++...|+.+.+....
T Consensus        95 ~~vPa~-iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~  167 (345)
T KOG2234|consen   95 VSVPAL-IYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSL  167 (345)
T ss_pred             HHHHHH-HHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCC
Confidence            333333 3567777899999999999999999999999999999999999999999999999999999985443

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=96.09  E-value=0.01  Score=52.44  Aligned_cols=132  Identities=15%  Similarity=0.065  Sum_probs=76.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhcCCccccccccchHHHHHHHHHHHHHHHH
Q 018069          184 GCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQFHSGWEIFCVFYSGLVASAMS  263 (361)
Q Consensus       184 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  263 (361)
                      |.+.++.|+++++...+=.||.-..  |++....++.....+......+..+.+  .+  .    .+.++. |. .-..+
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~~~g--Dg~~fQw~~~~~i~~~g~~v~~~~~~p--~f--~----p~amlg-G~-lW~~g   68 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKFDTG--DGFFFQWVMCSGIFLVGLVVNLILGFP--PF--Y----PWAMLG-GA-LWATG   68 (254)
T ss_pred             CchhHHHHHHHhcccceeeEeccCC--CcHHHHHHHHHHHHHHHHHHHHhcCCC--cc--e----eHHHhh-hh-hhhcC
Confidence            5678899999999999987775322  577777777666666666555543221  11  0    111111 11 12223


Q ss_pred             HHHHHHHHhcCCceeeec-cchhHHHHHHHHHHH-HhcCc---c--chhhHHHHHHHHHHHHHhhcccccc
Q 018069          264 FAVQIWVIDRGGPMFVSA-YLPVQTMLVAIMATI-ALGEE---F--YLGGVIGASLIIAGLYLVVLGKDEE  327 (361)
Q Consensus       264 ~~l~~~a~~~~~~~~~s~-~~~~~pv~~~l~~~~-~~ge~---~--s~~~~iG~~lil~g~~l~~~~~~~~  327 (361)
                      ..+-.-.+|..+-...-. -...+.+.+...+-+ +||++   +  .+..++|.+++++|..++..-|.+.
T Consensus        69 N~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~  139 (254)
T PF07857_consen   69 NILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEE  139 (254)
T ss_pred             ceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence            333334444444332222 244577777777755 56553   2  4667899999999988887655444

The region concerned is approximately 280 residues long.

>TIGR00803 nst UDP-galactose transporter

Probab=95.84  E-value=0.03  Score=48.75  Aligned_cols=58  Identities=14%  Similarity=-0.083  Sum_probs=52.6

Q ss_pred             HHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHH
Q 018069           83 TLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGAS  146 (361)
Q Consensus        83 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~  146 (361)
                      +....+....+++.+....++...+.++++.+++.++++|+++..      ++.|+.+.+.|+.
T Consensus       163 a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~------~~~g~~lV~~~~~  220 (222)
T TIGR00803       163 VGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISST------FYLGAILVFLATF  220 (222)
T ss_pred             HhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHH------HHHHHHHHHeeeE
Confidence            456677888999999999999999999999999999999999997      9999999988864

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=95.75  E-value=0.038  Score=42.25  Aligned_cols=108  Identities=8%  Similarity=0.019  Sum_probs=73.9

Q ss_pred             HHHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhcCCccccccccchHHHHHHHHHHHHHHHHHHHHHH
Q 018069          190 GHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQFHSGWEIFCVFYSGLVASAMSFAVQIW  269 (361)
Q Consensus       190 ~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~  269 (361)
                      +.+++|+..+-+.||..+..++...- . +.......    .+              ..|-..+  ....+..+-..|++
T Consensus         3 ~Vg~~WG~Tnpfik~g~~~~~~~~~~-~-~~~~~~~~----Ll--------------~n~~y~i--pf~lNq~GSv~f~~   60 (113)
T PF10639_consen    3 LVGILWGCTNPFIKRGSSGLEKVKAS-L-QLLQEIKF----LL--------------LNPKYII--PFLLNQSGSVLFFL   60 (113)
T ss_pred             eehHHhcCchHHHHHHHhhcCCccch-H-HHHHHHHH----HH--------------HhHHHHH--HHHHHHHHHHHHHH
Confidence            35788999999999988766522221 1 11111111    11              1111111  22235667778889


Q ss_pred             HHhcCCceeeeccc-hhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHH
Q 018069          270 VIDRGGPMFVSAYL-PVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYL  319 (361)
Q Consensus       270 a~~~~~~~~~s~~~-~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l  319 (361)
                      .+.+.+-+.+.++. .+.-+++++.++++.+|..+...++|+.+++.|+.+
T Consensus        61 ~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L  111 (113)
T PF10639_consen   61 LLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL  111 (113)
T ss_pred             HHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence            99999999999995 889999999998877777888999999999999764

Many members are annotated as potential transmembrane proteins.

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=95.69  E-value=0.0049  Score=55.26  Aligned_cols=123  Identities=18%  Similarity=0.277  Sum_probs=90.6

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhcCCccccccccchHHHHHHHHHH
Q 018069          178 EKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQFHSGWEIFCVFYSGL  257 (361)
Q Consensus       178 ~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  257 (361)
                      ..++..|.++++.+.+..+...++.||..++.. .   ..            .-. .+++   ..... .   ...+.|+
T Consensus        16 ~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~-~---~~------------~ra-~~gg---~~yl~-~---~~Ww~G~   71 (335)
T KOG2922|consen   16 SSDNIIGLVLAISSSIFIGSSFILKKKGLKRAG-A---SG------------LRA-GEGG---YGYLK-E---PLWWAGM   71 (335)
T ss_pred             ccCceeeeeehhhccEEEeeehhhhHHHHHHHh-h---hc------------ccc-cCCC---cchhh-h---HHHHHHH
Confidence            456678999999999999999999888776643 1   00            000 1111   11111 1   1222345


Q ss_pred             HHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhccc
Q 018069          258 VASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLGK  324 (361)
Q Consensus       258 ~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~~  324 (361)
                      +...++-..-+.|....+++.+++++.++.+.+++++..+++|++++...+||++.++|........
T Consensus        72 ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~ha  138 (335)
T KOG2922|consen   72 LTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHA  138 (335)
T ss_pred             HHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEec
Confidence            5566777777788888999999999999999999999999999999999999999999976665433

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=95.34  E-value=0.16  Score=45.38  Aligned_cols=137  Identities=12%  Similarity=0.118  Sum_probs=106.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCccHHHHHHHHHHHHHHHHHHHHhhccCCC-----CCCHHHHHHHHHHH
Q 018069            5 RAKLHLAMTIFQFGYAGNHVIMRTALNM-GVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRP-----TLTYSFLLQFFLLG   78 (361)
Q Consensus         5 ~~~g~l~~l~~~~~~~~~~~~~k~~~~~-~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~g   78 (361)
                      ...|++++....+.=|+.+..-...... +++++.+.+.-.+...+.-.....-. ...++     +..++.++-+++..
T Consensus       170 s~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~q-g~~~~av~F~~~hp~~~~Di~l~s  248 (327)
T KOG1581|consen  170 SPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQ-GHLLPAVSFIKEHPDVAFDILLYS  248 (327)
T ss_pred             chHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcC-CCCchHHHHHHcChhHHHHHHHHH
Confidence            4568888888888777777666555543 58899999988888887766664322 22222     34567777788999


Q ss_pred             HHHHHHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHH
Q 018069           79 LVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVIT  149 (361)
Q Consensus        79 ~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~  149 (361)
                      .++. .++.+.|+-++.-.+-.-+.+..+-=++..+++.+.++.++++.      ||.|+.+.+.|+.+=.
T Consensus       249 ~~ga-vGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~------q~~g~~iVFg~i~l~~  312 (327)
T KOG1581|consen  249 TCGA-VGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSE------QWLGVLIVFGGIFLEI  312 (327)
T ss_pred             Hhhh-hhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchh------hccCeeeehHHHHHHH
Confidence            9875 78888888898877777788888899999999999999999996      9999999999988754

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.30  E-value=0.29  Score=39.39  Aligned_cols=140  Identities=14%  Similarity=0.050  Sum_probs=83.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHH
Q 018069            5 RAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITL   84 (361)
Q Consensus         5 ~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   84 (361)
                      +.-..+..+.+..+-.....+.....+..-+|..-.+.-+..+.+++..+.+..++.......++..++.+.-|++|. .
T Consensus         3 ~~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lGa-~   81 (150)
T COG3238           3 MYLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLGA-I   81 (150)
T ss_pred             cHHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchhh-h
Confidence            344566667777777777666666555423599999999999988888888774443332222333445556666654 3


Q ss_pred             hHHHHHhhccCCCcchhhh-hccchhHHHHHHHHHhhh-cccccccccccchhhHHHHHHHHHHHH
Q 018069           85 NQGSYIFGLDNTSPIFASA-VENAVPAVTFIMAVLLRI-EQIHLTRKDGIAKVLGTLISVGGASVI  148 (361)
Q Consensus        85 ~~~~~~~al~~~~~~~~~~-l~~~~pi~~~lla~~~l~-e~~~~~~~~~~~~~~g~~l~~~Gv~li  148 (361)
                      .-..-........++.... ...-+-+...++..+=.. +   .+|+.+..+++|+.+.++|++++
T Consensus        82 ~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~---~~~~~~~~r~lgi~L~l~gil~~  144 (150)
T COG3238          82 FVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGV---PKRPLNLPRILGILLVLAGILLA  144 (150)
T ss_pred             hhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCC---CcCCCCHHHHHHHHHHHHHHHHh
Confidence            3334445555555555543 334455555555554332 2   12233445999999999995554

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=94.10  E-value=0.71  Score=41.74  Aligned_cols=137  Identities=13%  Similarity=0.145  Sum_probs=104.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCccHHHHHHHHHHHHHHHHHHHHhhc-c----CC-CCCCHHHHHHHHHHH
Q 018069            6 AKLHLAMTIFQFGYAGNHVIMRTALNM-GVSKLVFPLYRNIIAVIVLVPFAYFLEK-K----DR-PTLTYSFLLQFFLLG   78 (361)
Q Consensus         6 ~~g~l~~l~~~~~~~~~~~~~k~~~~~-~~~p~~~~~~r~~~~~l~l~~~~~~~~~-~----~~-~~~~~~~~~~~~~~g   78 (361)
                      ..|+.++....+.-+......|...+. +.+.+.++++..+.+.+.+......... +    .. .......+..+.+.+
T Consensus       156 ~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lSc  235 (314)
T KOG1444|consen  156 LRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSC  235 (314)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHH
Confidence            458899999999999999999988765 4778888999988888776666643221 1    00 011234566778888


Q ss_pred             HHHHHHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHH
Q 018069           79 LVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVIT  149 (361)
Q Consensus        79 ~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~  149 (361)
                      +++. +-.++.+++.+..++...++.....-..+.+...++.+++.++-      ..+|+.++++|-++-.
T Consensus       236 v~gf-~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~------n~~gll~~~~ggv~Y~  299 (314)
T KOG1444|consen  236 VMGF-GISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFL------NVIGLLVGFFGGVLYS  299 (314)
T ss_pred             HHHH-HHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechh------hhHHHHHHhhhhhHHh
Confidence            8877 55667788999999999888886677777777777878888885      9999999999988764

>KOG4831 consensus Unnamed protein [Function unknown]

Probab=93.95  E-value=0.18  Score=37.41  Aligned_cols=116  Identities=20%  Similarity=0.184  Sum_probs=71.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCccHH--HHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 018069           10 LAMTIFQFGYAGNHVIMRTALNMGVSKLVF--PLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITLNQG   87 (361)
Q Consensus        10 l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~--~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   87 (361)
                      .-++...++||...++.|.... |.+..--  .-+|.+..           +.+.. ..+|+++..+.+    +. .+..
T Consensus         6 ~~lvaVgllWG~Tnplirrgs~-g~~~v~~~~~k~~~~lq-----------e~~tl-~l~w~Y~iPFll----Nq-cgSa   67 (125)
T KOG4831|consen    6 DKLVAVGLLWGATNPLIRRGSL-GWDKVKSSSRKIMIALQ-----------EMKTL-FLNWEYLIPFLL----NQ-CGSA   67 (125)
T ss_pred             HHHHHHHHHHccccHHHHHHHh-hHhhccCchHHHHHHHH-----------HHHHH-HHhHHHHHHHHH----HH-hhHH
Confidence            3467788999999999998765 2322211  11111110           01001 123344333222    22 4567


Q ss_pred             HHHhhccCCCcchhhhhccc-hhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHH
Q 018069           88 SYIFGLDNTSPIFASAVENA-VPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVIT  149 (361)
Q Consensus        88 ~~~~al~~~~~~~~~~l~~~-~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~  149 (361)
                      +||.-+...+.+.+..+.+. .-.|+.+.+.. ++|+..-+     ..++|..+..+|+.+++
T Consensus        68 ly~~tLa~a~islavpv~nsltfafta~~G~~-LGE~~~g~-----~a~lGt~liv~Gi~Lci  124 (125)
T KOG4831|consen   68 LYYLTLASAPISLAVPVTNSLTFAFTAIFGKA-LGEETQGG-----LALLGTSLIVFGIWLCI  124 (125)
T ss_pred             HHHHHHhcCCceeeeeecchhHHHHHHHHHHH-hccccccc-----eeehhhhHHhhhhhhee
Confidence            88899999999999877765 66667777764 57777666     48999999999987753

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=93.30  E-value=0.85  Score=41.80  Aligned_cols=141  Identities=15%  Similarity=0.080  Sum_probs=85.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhc-CC-ccccccccchHHHHHHHHHH
Q 018069          180 NWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFE-RD-SAAWQFHSGWEIFCVFYSGL  257 (361)
Q Consensus       180 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~-~~~~~~~~~~~~~~l~~~~~  257 (361)
                      +...|+++..+++++.+.+.+=.||. |+.+ -...-..+.+++-++.-.+..... ++ .......+...++.....|+
T Consensus         4 ~ii~Gii~h~iGg~~~~sfy~P~kkv-k~Ws-WEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~   81 (344)
T PF06379_consen    4 AIILGIIFHAIGGFASGSFYVPFKKV-KGWS-WESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFGV   81 (344)
T ss_pred             hHHHHHHHHHHHHHHhhhhccchhhc-CCcc-HHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHH
Confidence            45689999999999999999998884 5553 223333334444333322222211 22 12233334455666666777


Q ss_pred             HHHHHHHHHHHHHHhcCCceeee-ccchhHHHHHHHHHHHHhcC-------ccchhhHHHHHHHHHHHHHhhcc
Q 018069          258 VASAMSFAVQIWVIDRGGPMFVS-AYLPVQTMLVAIMATIALGE-------EFYLGGVIGASLIIAGLYLVVLG  323 (361)
Q Consensus       258 ~~~~~~~~l~~~a~~~~~~~~~s-~~~~~~pv~~~l~~~~~~ge-------~~s~~~~iG~~lil~g~~l~~~~  323 (361)
                      + =.++-..|-.++|+++.+... +..-+..+++.++--++.|+       +-....++|.++.++|+.+..+.
T Consensus        82 l-WGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~A  154 (344)
T PF06379_consen   82 L-WGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKA  154 (344)
T ss_pred             H-HhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHH
Confidence            5 567778888999999875543 33334555566655444332       22345678999999998887654

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=92.51  E-value=0.36  Score=41.59  Aligned_cols=75  Identities=19%  Similarity=0.221  Sum_probs=65.2

Q ss_pred             HHHHHHHHHHHHHHHHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHH
Q 018069           69 SFLLQFFLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVI  148 (361)
Q Consensus        69 ~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li  148 (361)
                      ..++.+..+++.+. +++.+.+.-..+-++-.-+++..+--+|+++.+.++++.+++.|      ||+|..+.+.|...-
T Consensus       239 ~~~~~l~l~ai~s~-LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~r------QwlgtvlVF~aL~~D  311 (337)
T KOG1580|consen  239 YVFWDLTLLAIASC-LGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGR------QWLGTVLVFSALTAD  311 (337)
T ss_pred             HHHHHHHHHHHHHH-hhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHH------HHHHHHHHHHHhhhH
Confidence            44555677777764 88889999999999999999999999999999999999999998      999999999998876


Q ss_pred             HH
Q 018069          149 TL  150 (361)
Q Consensus       149 ~~  150 (361)
                      +.
T Consensus       312 ~~  313 (337)
T KOG1580|consen  312 VV  313 (337)
T ss_pred             hh
Confidence            54

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=91.77  E-value=0.079  Score=44.23  Aligned_cols=63  Identities=21%  Similarity=0.284  Sum_probs=57.3

Q ss_pred             HHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhccc
Q 018069          262 MSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLGK  324 (361)
Q Consensus       262 ~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~~  324 (361)
                      .+.++|..++++++|+.++.+..-+-.+..+++++++|+++....++..++.+.|++...+.+
T Consensus        65 ~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~D  127 (290)
T KOG4314|consen   65 GANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYAD  127 (290)
T ss_pred             cCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEecc
Confidence            466788999999999999999999999999999999999999999999999999988776543

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=90.21  E-value=1.6  Score=37.51  Aligned_cols=135  Identities=16%  Similarity=0.207  Sum_probs=98.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc-CCCccHHHHHHHHHHHHHHHHHHHHhhccC----CCCCCHHHHHHHHHHHHHHH
Q 018069            8 LHLAMTIFQFGYAGNHVIMRTALNM-GVSKLVFPLYRNIIAVIVLVPFAYFLEKKD----RPTLTYSFLLQFFLLGLVGI   82 (361)
Q Consensus         8 g~l~~l~~~~~~~~~~~~~k~~~~~-~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~----~~~~~~~~~~~~~~~g~~~~   82 (361)
                      |++++...++.-+..-...|.-.+. ....++..++..+++..+++.+-+..+...    -...+.....+++..|++..
T Consensus       156 GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~sv  235 (309)
T COG5070         156 GYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSV  235 (309)
T ss_pred             ceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHh
Confidence            5555656555555555555544331 266788899999999888777766543211    11334555667888888865


Q ss_pred             HHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHH
Q 018069           83 TLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVIT  149 (361)
Q Consensus        83 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~  149 (361)
                       +-..+--++++-++....+++..+.-.-.++-+.++++|+.+..      .+.++.+++....+-.
T Consensus       236 -giSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~------si~sillGflsg~iYa  295 (309)
T COG5070         236 -GISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFL------SIFSILLGFLSGAIYA  295 (309)
T ss_pred             -hhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHH------HHHHHHHHHHHHHHHH
Confidence             45567778899999999999999999999999999999999996      8999999888776654

>PRK02237 hypothetical protein; Provisional

Probab=87.28  E-value=2.9  Score=31.42  Aligned_cols=46  Identities=17%  Similarity=0.125  Sum_probs=38.6

Q ss_pred             eeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhccc
Q 018069          279 VSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLGK  324 (361)
Q Consensus       279 ~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~~  324 (361)
                      .+...-.-.+.+.++++.+-|++|+...++|..+.++|+.+..+..
T Consensus        62 YAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p  107 (109)
T PRK02237         62 YAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP  107 (109)
T ss_pred             HHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence            3455666788899999999999999999999999999987775544

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=86.48  E-value=0.065  Score=46.63  Aligned_cols=140  Identities=13%  Similarity=0.019  Sum_probs=101.9

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHhHhhh-CCChhHHHHHHHHHHHHHHHHHHHhhcCCccccccccchHHHHHHHHHH
Q 018069          179 KNWTLGCICLIGHCLFWSSWIVLQSPVLKK-YPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQFHSGWEIFCVFYSGL  257 (361)
Q Consensus       179 ~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  257 (361)
                      ...+.|..++=.-.+|-.........+.++ .+.|...++.....-+++..++.++....       -...|...+.+++
T Consensus        14 kk~li~~~LGQiLSL~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~~~-------~~~~~~hYilla~   86 (336)
T KOG2766|consen   14 KKTLIGLGLGQILSLLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRRKY-------IKAKWRHYILLAF   86 (336)
T ss_pred             hhhhheeeHHHHHHHHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhhHH-------HHHHHHHhhheeE
Confidence            344556555555455555555555555555 44677888888887788888877753211       1123555556666


Q ss_pred             HHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhccccc
Q 018069          258 VASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLGKDE  326 (361)
Q Consensus       258 ~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~~~~  326 (361)
                      + -.=+.++..+|.|+++-+.++.+.....+...+++|++++.+-.+.++.|.++.++|+.+....+-.
T Consensus        87 ~-DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~  154 (336)
T KOG2766|consen   87 V-DVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVH  154 (336)
T ss_pred             E-eecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeec
Confidence            4 4566667789999999999999999999999999999999999999999999999998887765543

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=85.35  E-value=4.3  Score=36.68  Aligned_cols=117  Identities=15%  Similarity=0.160  Sum_probs=78.6

Q ss_pred             hhCCChhHHHHHHHHHHHHHHHHHHHhhcCCccc-cccccchH-HHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeccch
Q 018069          207 KKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAA-WQFHSGWE-IFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLP  284 (361)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~-~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~  284 (361)
                      +..+=|+.++.+....-...........+..... ....++.+ .-.+.-.|+ +++.-..+-|+++++++.+..++.-.
T Consensus        40 ~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtal-ata~DIGLSN~sl~yVtlSlYTM~KS  118 (349)
T KOG1443|consen   40 KNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTAL-ATALDIGLSNWSLEYVTLSLYTMTKS  118 (349)
T ss_pred             cCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhh-hhhcccccccceeeeeeeeeeeeccc
Confidence            3444455666655555444444333333222111 11122222 222334444 57788888999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhccc
Q 018069          285 VQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLGK  324 (361)
Q Consensus       285 ~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~~  324 (361)
                      ..++|..+++.++-=|++++....=..+|-+|+++..++.
T Consensus       119 Ssi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~Ks  158 (349)
T KOG1443|consen  119 SSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKS  158 (349)
T ss_pred             cHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecc
Confidence            9999999999998889999998888888888888777654

>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function

Probab=83.50  E-value=1.8  Score=32.48  Aligned_cols=45  Identities=18%  Similarity=0.192  Sum_probs=37.9

Q ss_pred             eccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhccc
Q 018069          280 SAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLGK  324 (361)
Q Consensus       280 s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~~  324 (361)
                      +...-.-.+.+.++++.+-|++|+...++|..+.++|+.+..+..
T Consensus        61 AAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~P  105 (107)
T PF02694_consen   61 AAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAP  105 (107)
T ss_pred             HHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecC
Confidence            344556678899999999999999999999999999988776554

; GO: 0016020 membrane

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=82.36  E-value=2.9  Score=37.13  Aligned_cols=141  Identities=19%  Similarity=0.189  Sum_probs=98.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCccHHHHHHHHHHHHHHHHHHHHhhc----cCCCCC-CHHHHHHHHHHHH
Q 018069            6 AKLHLAMTIFQFGYAGNHVIMRTALNM-GVSKLVFPLYRNIIAVIVLVPFAYFLEK----KDRPTL-TYSFLLQFFLLGL   79 (361)
Q Consensus         6 ~~g~l~~l~~~~~~~~~~~~~k~~~~~-~~~p~~~~~~r~~~~~l~l~~~~~~~~~----~~~~~~-~~~~~~~~~~~g~   79 (361)
                      ..|.++-.++.+.-+.+.+..|..... +=.-+.+.++..+.+.++++|.......    ...+.. .++.|..+.+.|+
T Consensus       184 ~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsgl  263 (347)
T KOG1442|consen  184 WIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGL  263 (347)
T ss_pred             hhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHH
Confidence            578999999999999999999965543 1234667888889999999998876542    111222 5677777788888


Q ss_pred             HHHHHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcC
Q 018069           80 VGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKG  153 (361)
Q Consensus        80 ~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~  153 (361)
                      +|...+.. -.+=++-+++-..-+-..--...-.+++..+++|..+.-      .|.+-++.+.|...-...++
T Consensus       264 fgF~mgyv-Tg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~l------wwtsn~~vLvgs~~YT~vk~  330 (347)
T KOG1442|consen  264 FGFAMGYV-TGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGL------WWTSNIVVLVGSLAYTLVKE  330 (347)
T ss_pred             HHHHhhhe-eeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhh------eeeeeEEEEehhHHHHHHHH
Confidence            77644432 223344455555444444456677789999999998884      88888888888887665444

>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine

Probab=81.83  E-value=1.4  Score=39.61  Aligned_cols=132  Identities=11%  Similarity=0.018  Sum_probs=70.0

Q ss_pred             HHHHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhcCC--------cc---ccccccchHHHHHHHHHH
Q 018069          189 IGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERD--------SA---AWQFHSGWEIFCVFYSGL  257 (361)
Q Consensus       189 l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--------~~---~~~~~~~~~~~~l~~~~~  257 (361)
                      +++.+||+.+-..+|-..|+...+ ....+=+..+.+....+..+.-+.        +.   +..+.++..+.....-|+
T Consensus         2 ~itmlcwGSW~nt~kL~~r~gR~~-qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aGGv   80 (336)
T PF07168_consen    2 VITMLCWGSWPNTQKLAERRGRLP-QHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAGGV   80 (336)
T ss_pred             eeehhhhcChHHHHHHHHhcCCcc-ceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHhhH
Confidence            456788888888877766544312 122333333333333222221111        11   112223334444444555


Q ss_pred             HHHHHHHHHHHHHHhcCCceeeeccchh-HHHHHHHHHHHHhcCccc--hhhHHHHHHHHHHHHHhhcc
Q 018069          258 VASAMSFAVQIWVIDRGGPMFVSAYLPV-QTMLVAIMATIALGEEFY--LGGVIGASLIIAGLYLVVLG  323 (361)
Q Consensus       258 ~~~~~~~~l~~~a~~~~~~~~~s~~~~~-~pv~~~l~~~~~~ge~~s--~~~~iG~~lil~g~~l~~~~  323 (361)
                      + --++..+..+++...+.+..-++... ..+++.++.++ ++.+.+  ..-+.|..++++++++....
T Consensus        81 v-fnlgNillq~aia~aGmSVafpvg~glalVlGv~~NYf-ld~~~n~a~iLF~GV~cf~iAI~lga~a  147 (336)
T PF07168_consen   81 V-FNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYF-LDPKINRAEILFPGVACFLIAIILGAAA  147 (336)
T ss_pred             h-hhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeee-ccCCCCCceEEEccHHHHHHHHHHHHHH
Confidence            4 44677788888888877666655533 44445556654 344433  34566888888888776543

Transport is dependent on glucose and a proton gradient [].

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=80.13  E-value=2.2  Score=38.03  Aligned_cols=65  Identities=11%  Similarity=0.055  Sum_probs=55.7

Q ss_pred             HHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhcc
Q 018069          259 ASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLG  323 (361)
Q Consensus       259 ~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~  323 (361)
                      |-..+-.+.+.++..++++...++.-...+|+-+++..+++.+++..||.|+..+.+|+.++...
T Consensus        95 ~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~  159 (372)
T KOG3912|consen   95 CDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSL  159 (372)
T ss_pred             HHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeee
Confidence            34455667778888888888888888889999999999999999999999999999998877543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	361
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	99.01
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.74
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.59
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.55

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=99.01  E-value=4e-10  Score=88.76  Aligned_cols=71  Identities=20%  Similarity=0.221  Sum_probs=53.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCceeeecc-chhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhccc
Q 018069          254 YSGLVASAMSFAVQIWVIDRGGPMFVSAY-LPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLGK  324 (361)
Q Consensus       254 ~~~~~~~~~~~~l~~~a~~~~~~~~~s~~-~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~~  324 (361)
                      .++++++++++.++++++++.+++++..+ ..+.|+++.+++++++||++++.+++|+++|++|+++....+
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            35666789999999999999999999999 899999999999999999999999999999999999887543

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.74  E-value=1.3e-07  Score=71.77  Aligned_cols=69  Identities=20%  Similarity=0.232  Sum_probs=63.3

Q ss_pred             HHHHHHHHHHHHHHHHHhcCCceeeecc-chhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhcc
Q 018069          255 SGLVASAMSFAVQIWVIDRGGPMFVSAY-LPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLG  323 (361)
Q Consensus       255 ~~~~~~~~~~~l~~~a~~~~~~~~~s~~-~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~  323 (361)
                      .++++...++.++.+++|+.+.+.+.++ ..+.|+++.+++++++||++++.+++|+.+|+.|+++....
T Consensus        35 ~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~  104 (110)
T 3b5d_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            4555678999999999999999999888 89999999999999999999999999999999999888654

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.59  E-value=5.1e-07  Score=68.42  Aligned_cols=69  Identities=12%  Similarity=0.099  Sum_probs=62.6

Q ss_pred             HHHHHHHHHhHHHHHhhccCCCcchhhhh-ccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHH
Q 018069           76 LLGLVGITLNQGSYIFGLDNTSPIFASAV-ENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITL  150 (361)
Q Consensus        76 ~~g~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~  150 (361)
                      ..+.+...+++.++..++++.|.+.+..+ ..+.|+++.+++++++||+++++      +++|+.+.+.|++++..
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~------~~~Gi~lIi~Gv~~l~~  103 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLP------AIIGMMLICAGVLIINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHhc
Confidence            45555667889999999999999999888 79999999999999999999997      99999999999999863

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.55  E-value=1.5e-07  Score=73.95  Aligned_cols=69  Identities=12%  Similarity=0.099  Sum_probs=52.7

Q ss_pred             HHHHHHHHHhHHHHHhhccCCCcchhhhh-ccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHH
Q 018069           76 LLGLVGITLNQGSYIFGLDNTSPIFASAV-ENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITL  150 (361)
Q Consensus        76 ~~g~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~  150 (361)
                      ..+++...+++.++.+++++.+++.+..+ .++.|++++++++++++|+++++      +++|+.+.++|++++..
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~------~~~Gi~LIi~GV~ll~~  103 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLP------AIIGMMLICAGVLIINL  103 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------------CHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHhc
Confidence            45666677899999999999999999888 89999999999999999999997      99999999999999874

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00