Citrus Sinensis ID: 018088
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 361 | 2.2.26 [Sep-21-2011] | |||||||
| O06995 | 226 | Beta-phosphoglucomutase O | yes | no | 0.540 | 0.862 | 0.259 | 2e-06 | |
| Q9X0Y1 | 216 | Phosphorylated carbohydra | yes | no | 0.504 | 0.842 | 0.256 | 6e-06 | |
| P77366 | 219 | Beta-phosphoglucomutase O | N/A | no | 0.493 | 0.812 | 0.295 | 2e-05 | |
| P44004 | 200 | Uncharacterized protein H | yes | no | 0.468 | 0.845 | 0.270 | 0.0001 | |
| Q8UEY9 | 233 | Phosphoglycolate phosphat | yes | no | 0.432 | 0.669 | 0.254 | 0.0003 | |
| P77475 | 188 | Fructose-1-phosphate phos | N/A | no | 0.470 | 0.904 | 0.270 | 0.0005 |
| >sp|O06995|PGMB_BACSU Beta-phosphoglucomutase OS=Bacillus subtilis (strain 168) GN=yvdM PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 95/216 (43%), Gaps = 21/216 (9%)
Query: 121 GLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKE 179
+IF D V+ DT AWK +A E +IP + D+ ++ + L +L++G
Sbjct: 3 AVIFDLDGVITDTAEYHFLAWKHIA--EQIDIPFDRDMNERLKGISREESLESILIFGGA 60
Query: 180 ESELDRLNSRLTQLY------YDNLLSVTEP---MEGLQEWLDAVSSARIPCAVVSGLDR 230
E++ N+ +L Y L+S P + G+ L + + I + S
Sbjct: 61 ETKY--TNAEKQELMHRKNRDYQMLISKLTPEDLLPGIGRLLCQLKNENIKIGLASS--S 116
Query: 231 RKMVEALERMGLLKYFQAIVSEEDGMESMAHR--FLSAAVKLDRKPSKCVVFEDDPRAIT 288
R + L R+ ++ F AIV + FL+AA LD P+ C ED I+
Sbjct: 117 RNAPKILRRLAIIDDFHAIVDPTTLAKGKPDPDIFLTAAAMLDVSPADCAAIEDAEAGIS 176
Query: 289 AAHNCTMMAVGLIGAHRAYDLVQADLAVANFNELSV 324
A + M AVG+ + ++ ADL V ++L++
Sbjct: 177 AIKSAGMFAVGV---GQGQPMLGADLVVRQTSDLTL 209
|
Catalyze the interconversion of D-glucose 1-phosphate (G1P) and D-glucose 6-phosphate (G6P), and forming beta-D-glucose 1,6-(bis)phosphate (beta-G16P) as an intermediate. The beta-phosphoglucomutase (Beta-PGM) acts on the beta-C(1) anomer of G1P. It play a key role in the regulation of the flow of carbohydrate intermediates in glycolysis and the formation of the sugar nucleotide UDP-glucose. Bacillus subtilis (strain 168) (taxid: 224308) EC: 5EC: .EC: 4EC: .EC: 2EC: .EC: 6 |
| >sp|Q9X0Y1|P1254_THEMA Phosphorylated carbohydrates phosphatase TM_1254 OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=TM_1254 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 52.4 bits (124), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 87/195 (44%), Gaps = 13/195 (6%)
Query: 121 GLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKE 179
+IF D V+ DT L A++++A GK P D+ R+I+ L ++ +
Sbjct: 3 AVIFDMDGVLMDTEPLYFEAYRRVAESYGK--PYTEDLHRRIMGVPEREGLPILMEALEI 60
Query: 180 ESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALER 239
+ L+ R+ + + + G++E L+ V S RI A+ + +R+ +E L R
Sbjct: 61 KDSLENFKKRVHEEKKRVFSELLKENPGVREALEFVKSKRIKLALATSTPQREALERLRR 120
Query: 240 MGLLKYFQAIV--SEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMA 297
+ L KYF +V + + +L +L+ P K VVFED + AA +
Sbjct: 121 LDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNVVPEKVVVFEDSKSGVEAAKSA---- 176
Query: 298 VGLIGAHRAYDLVQA 312
G R Y +V +
Sbjct: 177 ----GIERIYGVVHS 187
|
Displays high phosphatase activity toward erythrose 4-phosphate, fructose 6-phosphate, 2-deoxyglucose 6-phosphate, and mannose 6-phosphate. May have a role in the intracellular metabolism of many phosphorylated carbohydrates. Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) (taxid: 243274) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: - |
| >sp|P77366|PGMB_ECOLI Beta-phosphoglucomutase OS=Escherichia coli (strain K12) GN=ycjU PE=1 SV=1 | Back alignment and function description |
|---|
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 87/193 (45%), Gaps = 15/193 (7%)
Query: 121 GLIFSWD-VVADTRALKLNAWKQLAFEEGKEI-PQEGDVLRQILNAGADHVLHKVLLWGK 178
G+IF D V+ DT L AW+Q+A E G I Q + L+ I D L ++L G
Sbjct: 5 GVIFDLDGVITDTAHLHFQAWQQIAAEIGISIDAQFNESLKGI---SRDESLRRILQHGG 61
Query: 179 EESELD-----RLNSRLTQLYYDNL--LSVTEPMEGLQEWLDAVSSARIPCAVVS-GLDR 230
+E + + +L R LY +L L+V + G++ L + + +I + S L+
Sbjct: 62 KEGDFNSQERAQLAYRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASVSLNA 121
Query: 231 RKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAA 290
++ ALE F A S+ + FL+A L P C+ ED I A
Sbjct: 122 PTILAALELREFFT-FCADASQLKNSKPDPEIFLAACAGLGVPPQACIGIEDAQAGIDAI 180
Query: 291 HNCTMMAVGLIGA 303
+ M +VG IGA
Sbjct: 181 NASGMRSVG-IGA 192
|
Catalyze the interconversion of D-glucose 1-phosphate (G1P) and D-glucose 6-phosphate (G6P), forming beta-D-glucose 1,6-(bis)phosphate (beta-G16P) as an intermediate. The beta-phosphoglucomutase (Beta-PGM) acts on the beta-C(1) anomer of G1P. Glucose or lactose are used in preference to maltose, which is only utilized after glucose or lactose has been exhausted. It play a key role in the regulation of the flow of carbohydrate intermediates in glycolysis and the formation of the sugar nucleotide UDP-glucose. Escherichia coli (strain K12) (taxid: 83333) EC: 5 EC: . EC: 4 EC: . EC: 2 EC: . EC: 6 |
| >sp|P44004|Y488_HAEIN Uncharacterized protein HI_0488 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_0488 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 75/181 (41%), Gaps = 12/181 (6%)
Query: 121 GLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKE 179
GLIF D + DT + AW + GK+ E D GA +
Sbjct: 12 GLIFDMDGTLIDTMPVHAQAWTMV----GKKFGYEFDFQIMYNFGGATVRTIAGEMMKAA 67
Query: 180 ESELDRLNSRLT---QLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEA 236
LDR+ L +L Y L+ + E + + + P A+ SG R+ +
Sbjct: 68 NMPLDRIEDVLAAKRELSY-QLIPTQSKLLPTFEIVKSFHQKK-PIALGSGSHRKIIDML 125
Query: 237 LERMGLLKYFQAIVSEEDGMESMAH--RFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCT 294
++++ + YF AIVS +D E H FL A + PS+C+VFED + A +
Sbjct: 126 MDKLAIAPYFNAIVSADDVKEHKPHPETFLRCAELIQANPSRCIVFEDADLGVQAGLSAG 185
Query: 295 M 295
M
Sbjct: 186 M 186
|
Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (taxid: 71421) |
| >sp|Q8UEY9|GPH_AGRT5 Phosphoglycolate phosphatase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=gph PE=3 SV=2 | Back alignment and function description |
|---|
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 5/161 (3%)
Query: 180 ESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALER 239
E+++D L R Y + + P G+ E LDA+S A I AV + V LE+
Sbjct: 71 EADIDPLYERFITHYRAEMPGESRPYPGIIETLDALSQAGITLAVCTNKTEILAVPLLEK 130
Query: 240 MGLLKYFQAIVSEEDGM--ESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMA 297
+GL +YF AI + + A L K + ++ D I AA N + +
Sbjct: 131 LGLTRYFAAITCGDTFAFRKPDARHILGTIEKAGGDVQRSIMVGDSINDILAARNAAVPS 190
Query: 298 VGLIGAHRAYDLV--QADLAVANFNELSVINLRRLFANKGS 336
+G+ + +V + D+ + +F L+ +L +KG+
Sbjct: 191 IGVTFGYTDVPMVELEPDVVIDDFAALTPALFEKLV-SKGA 230
|
Specifically catalyzes the dephosphorylation of 2-phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Agrobacterium tumefaciens (strain C58 / ATCC 33970) (taxid: 176299) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 8 |
| >sp|P77475|YQAB_ECOLI Fructose-1-phosphate phosphatase YqaB OS=Escherichia coli (strain K12) GN=yqaB PE=1 SV=1 | Back alignment and function description |
|---|
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 78/185 (42%), Gaps = 15/185 (8%)
Query: 121 GLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGAD--HVLHKVLLWG 177
GLIF D + DT AW+++ G + D+ I G+ + ++
Sbjct: 7 GLIFDMDGTILDTEPTHRKAWREVLGHYGLQY----DIQAMIALNGSPTWRIAQAIIELN 62
Query: 178 KEESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSS--ARIPCAVVSGLDRRKMVE 235
+ + + L T+ LL EP+ +D V S R P AV +G +
Sbjct: 63 QADLDPHALAREKTEAVRSMLLDSVEPLP----LVDVVKSWHGRRPMAVGTGSESAIAEA 118
Query: 236 ALERMGLLKYFQAIVSEED--GMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNC 293
L +GL YF A+V+ + + FL A ++ +P++CVVFED I AA
Sbjct: 119 LLAHLGLRHYFDAVVAADHVKHHKPAPDTFLLCAQRMGVQPTQCVVFEDADFGIQAARAA 178
Query: 294 TMMAV 298
M AV
Sbjct: 179 GMDAV 183
|
Catalyzes strongly the dephosphorylation of fructose-1-phosphate (Fru1P) and slightly the dephosphorylation of 6-phosphogluconate (6P-Glu). It has low beta-phosphoglucomutase activity. Escherichia coli (strain K12) (taxid: 83333) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 361 | ||||||
| 255559643 | 366 | 2-deoxyglucose-6-phosphate phosphatase, | 0.941 | 0.928 | 0.794 | 1e-156 | |
| 145332024 | 364 | haloacid dehalogenase-like hydrolase [Ar | 0.986 | 0.978 | 0.745 | 1e-156 | |
| 18399067 | 365 | haloacid dehalogenase-like hydrolase [Ar | 0.986 | 0.975 | 0.746 | 1e-155 | |
| 21592870 | 365 | unknown [Arabidopsis thaliana] | 0.986 | 0.975 | 0.743 | 1e-155 | |
| 42572363 | 365 | haloacid dehalogenase-like hydrolase [Ar | 0.986 | 0.975 | 0.746 | 1e-155 | |
| 14532506 | 365 | AT3g10970/F9F8_21 [Arabidopsis thaliana] | 0.986 | 0.975 | 0.743 | 1e-154 | |
| 297833886 | 365 | predicted protein [Arabidopsis lyrata su | 0.986 | 0.975 | 0.738 | 1e-153 | |
| 449457419 | 367 | PREDICTED: uncharacterized protein LOC10 | 0.991 | 0.975 | 0.727 | 1e-152 | |
| 225448631 | 360 | PREDICTED: uncharacterized protein LOC10 | 0.914 | 0.916 | 0.774 | 1e-150 | |
| 224145920 | 368 | predicted protein [Populus trichocarpa] | 0.911 | 0.894 | 0.776 | 1e-147 |
| >gi|255559643|ref|XP_002520841.1| 2-deoxyglucose-6-phosphate phosphatase, putative [Ricinus communis] gi|223539972|gb|EEF41550.1| 2-deoxyglucose-6-phosphate phosphatase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust.
Identities = 274/345 (79%), Positives = 297/345 (86%), Gaps = 5/345 (1%)
Query: 22 PTLSSAHHLFFPSTLKLS-KFK---RLVIRNACGFDENGSFNGFPITPNKLFMQEAIGAE 77
P L + H FPS L+ S K K RL+IRNACGFD NGS NGFPITPNKLFMQE IGAE
Sbjct: 22 PLLCPSTHSLFPSNLRFSHKLKVRYRLLIRNACGFDANGSGNGFPITPNKLFMQETIGAE 81
Query: 78 YGEGFETFRQDGPLKVDVDFLNDRLQEGFLKRIRYAMKPDEAYGLIFSWD-VVADTRALK 136
YGEGFETFRQDGPLK+DVDFLNDRLQEGFL RIRYAMKPDEAYGLIFSWD VVAD RA+K
Sbjct: 82 YGEGFETFRQDGPLKIDVDFLNDRLQEGFLHRIRYAMKPDEAYGLIFSWDNVVADARAMK 141
Query: 137 LNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLYYD 196
LN WKQLA EEGKEIP++G + +L AGADHVLHKVL W ESELDRL RL+ LYYD
Sbjct: 142 LNVWKQLASEEGKEIPEDGHAHKLMLYAGADHVLHKVLRWETTESELDRLKLRLSHLYYD 201
Query: 197 NLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGM 256
+LL + EP EGL+EWLDAV+ ARIPCAVVS LDR MV LERMGL KYFQAIV+EEDGM
Sbjct: 202 HLLRLREPTEGLKEWLDAVARARIPCAVVSSLDRVNMVGVLERMGLKKYFQAIVAEEDGM 261
Query: 257 ESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAV 316
ESMAHRFLSAA+KLDRKPSKCVVFEDDPR ITAAHNCTMMAV LIGAH AY+LVQADLAV
Sbjct: 262 ESMAHRFLSAALKLDRKPSKCVVFEDDPRGITAAHNCTMMAVALIGAHPAYELVQADLAV 321
Query: 317 ANFNELSVINLRRLFANKGSTFMERQKQIVEKVPPKRKLTIDTIF 361
A+FNELSVINLRRLFANKGS+FM+++KQI+EK P KRKLTIDTIF
Sbjct: 322 ASFNELSVINLRRLFANKGSSFMDKEKQIIEKSPSKRKLTIDTIF 366
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|145332024|ref|NP_001078134.1| haloacid dehalogenase-like hydrolase [Arabidopsis thaliana] gi|332641464|gb|AEE74985.1| haloacid dehalogenase-like hydrolase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 556 bits (1433), Expect = e-156, Method: Compositional matrix adjust.
Identities = 273/366 (74%), Positives = 309/366 (84%), Gaps = 10/366 (2%)
Query: 4 MDCTYSNIRSTSLLIPSRPTLSSAHHLF-------FPSTLKLSKFKRLVIRNACGFD-EN 55
MDC+ S R +SLLI S P+ H F P KL K +RLV+R++ G D +N
Sbjct: 1 MDCSCST-RPSSLLISSEPSFRFPHSNFSSNLSFQIPKDTKLVK-QRLVVRSSSGSDYQN 58
Query: 56 GSFNGFPITPNKLFMQEAIGAEYGEGFETFRQDGPLKVDVDFLNDRLQEGFLKRIRYAMK 115
G NGFP+ PNKLFMQEAIGAEYGEGFETFRQDGPLKVDVDF N++LQ+GFL+RIRYAMK
Sbjct: 59 GDVNGFPLKPNKLFMQEAIGAEYGEGFETFRQDGPLKVDVDFWNEKLQDGFLQRIRYAMK 118
Query: 116 PDEAYGLIFSWDVVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLL 175
PDEAYGLIFSWD VADTR+LKL AWKQLA EEGKEI +E D+ R +L AGADHVL KVL
Sbjct: 119 PDEAYGLIFSWDNVADTRSLKLEAWKQLAAEEGKEITEEVDIQRLMLYAGADHVLRKVLF 178
Query: 176 WGKEESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVE 235
W K +S++DRL RL+++YYD+LL +TEP EGL++WLDAV++ARIPCAVVS LDR+ M+
Sbjct: 179 WEKTQSKIDRLKLRLSEIYYDSLLKLTEPKEGLRDWLDAVTTARIPCAVVSNLDRKNMIN 238
Query: 236 ALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTM 295
ALERMGL KYFQA+VSEEDGMES+AHRFLSAAVKLDRKPSKCVVFEDDPR ITAAHNCTM
Sbjct: 239 ALERMGLQKYFQAVVSEEDGMESIAHRFLSAAVKLDRKPSKCVVFEDDPRGITAAHNCTM 298
Query: 296 MAVGLIGAHRAYDLVQADLAVANFNELSVINLRRLFANKGSTFMERQKQIVEKVPPKRKL 355
MAVGLIGAHRAYDLVQADLAV NF ELSVINLRRLFANKGSTFM+ +KQI+EK PPKRKL
Sbjct: 299 MAVGLIGAHRAYDLVQADLAVGNFYELSVINLRRLFANKGSTFMDHEKQIIEKSPPKRKL 358
Query: 356 TIDTIF 361
TIDTIF
Sbjct: 359 TIDTIF 364
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|18399067|ref|NP_566385.1| haloacid dehalogenase-like hydrolase [Arabidopsis thaliana] gi|332641462|gb|AEE74983.1| haloacid dehalogenase-like hydrolase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 274/367 (74%), Positives = 310/367 (84%), Gaps = 11/367 (2%)
Query: 4 MDCTYSNIRSTSLLIPSRPTLSSAHHLF-------FPSTLKLSKFKRLVIRNACGFD-EN 55
MDC+ S R +SLLI S P+ H F P KL K +RLV+R++ G D +N
Sbjct: 1 MDCSCST-RPSSLLISSEPSFRFPHSNFSSNLSFQIPKDTKLVK-QRLVVRSSSGSDYQN 58
Query: 56 GSFNGFPITPNKLFMQEAIGAEYGEGFETFRQDGPLKVDVDFLNDRLQEGFLKRIRYAMK 115
G NGFP+ PNKLFMQEAIGAEYGEGFETFRQDGPLKVDVDF N++LQ+GFL+RIRYAMK
Sbjct: 59 GDVNGFPLKPNKLFMQEAIGAEYGEGFETFRQDGPLKVDVDFWNEKLQDGFLQRIRYAMK 118
Query: 116 PDEAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVL 174
PDEAYGLIFSWD VVADTR+LKL AWKQLA EEGKEI +E D+ R +L AGADHVL KVL
Sbjct: 119 PDEAYGLIFSWDNVVADTRSLKLEAWKQLAAEEGKEITEEVDIQRLMLYAGADHVLRKVL 178
Query: 175 LWGKEESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMV 234
W K +S++DRL RL+++YYD+LL +TEP EGL++WLDAV++ARIPCAVVS LDR+ M+
Sbjct: 179 FWEKTQSKIDRLKLRLSEIYYDSLLKLTEPKEGLRDWLDAVTTARIPCAVVSNLDRKNMI 238
Query: 235 EALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCT 294
ALERMGL KYFQA+VSEEDGMES+AHRFLSAAVKLDRKPSKCVVFEDDPR ITAAHNCT
Sbjct: 239 NALERMGLQKYFQAVVSEEDGMESIAHRFLSAAVKLDRKPSKCVVFEDDPRGITAAHNCT 298
Query: 295 MMAVGLIGAHRAYDLVQADLAVANFNELSVINLRRLFANKGSTFMERQKQIVEKVPPKRK 354
MMAVGLIGAHRAYDLVQADLAV NF ELSVINLRRLFANKGSTFM+ +KQI+EK PPKRK
Sbjct: 299 MMAVGLIGAHRAYDLVQADLAVGNFYELSVINLRRLFANKGSTFMDHEKQIIEKSPPKRK 358
Query: 355 LTIDTIF 361
LTIDTIF
Sbjct: 359 LTIDTIF 365
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|21592870|gb|AAM64820.1| unknown [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 273/367 (74%), Positives = 310/367 (84%), Gaps = 11/367 (2%)
Query: 4 MDCTYSNIRSTSLLIPSRPTLSSAHHLF-------FPSTLKLSKFKRLVIRNACGFD-EN 55
MDC+ S R +SLLI S P+ H F P KL K +RLV+R++ G D +N
Sbjct: 1 MDCSCST-RPSSLLISSEPSFRFPHSNFSSNLSFQIPKDTKLVK-QRLVVRSSSGSDYQN 58
Query: 56 GSFNGFPITPNKLFMQEAIGAEYGEGFETFRQDGPLKVDVDFLNDRLQEGFLKRIRYAMK 115
G NGFP+ PNKLFMQEAIGAEYGEGFETFRQDGPLKVDVDF N++LQ+GFL+RIRYAMK
Sbjct: 59 GDVNGFPLKPNKLFMQEAIGAEYGEGFETFRQDGPLKVDVDFWNEKLQDGFLQRIRYAMK 118
Query: 116 PDEAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVL 174
PDEAYGLIFSWD +VADTR+LKL AWKQLA EEGKEI +E D+ R +L AGADHVL KVL
Sbjct: 119 PDEAYGLIFSWDNIVADTRSLKLEAWKQLAAEEGKEITEEVDIQRLMLYAGADHVLRKVL 178
Query: 175 LWGKEESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMV 234
W K +S++DRL RL+++YYD+LL +TEP EGL++WLDAV++ARIPCAVVS LDR+ M+
Sbjct: 179 FWEKTQSKIDRLKLRLSEIYYDSLLKLTEPKEGLRDWLDAVTTARIPCAVVSNLDRKNMI 238
Query: 235 EALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCT 294
ALERMGL KYFQA+VSEEDGMES+AHRFLSAAVKLDRKPSKCVVFEDDPR ITAAHNCT
Sbjct: 239 NALERMGLQKYFQAVVSEEDGMESIAHRFLSAAVKLDRKPSKCVVFEDDPRGITAAHNCT 298
Query: 295 MMAVGLIGAHRAYDLVQADLAVANFNELSVINLRRLFANKGSTFMERQKQIVEKVPPKRK 354
MMAVGLIGAHRAYDLVQADLAV NF ELSVINLRRLFANKGSTFM+ +KQI+EK PPKRK
Sbjct: 299 MMAVGLIGAHRAYDLVQADLAVGNFYELSVINLRRLFANKGSTFMDHEKQIIEKSPPKRK 358
Query: 355 LTIDTIF 361
LTIDTIF
Sbjct: 359 LTIDTIF 365
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|42572363|ref|NP_974277.1| haloacid dehalogenase-like hydrolase [Arabidopsis thaliana] gi|332641463|gb|AEE74984.1| haloacid dehalogenase-like hydrolase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust.
Identities = 274/367 (74%), Positives = 310/367 (84%), Gaps = 11/367 (2%)
Query: 4 MDCTYSNIRSTSLLIPSRPTLSSAHHLF-------FPSTLKLSKFKRLVIRNACGFD-EN 55
MDC+ S R +SLLI S P+ H F P KL K +RLV+R++ G D +N
Sbjct: 1 MDCSCST-RPSSLLISSEPSFRFPHSNFSSNLSFQIPKDTKLVK-QRLVVRSSSGSDYQN 58
Query: 56 GSFNGFPITPNKLFMQEAIGAEYGEGFETFRQDGPLKVDVDFLNDRLQEGFLKRIRYAMK 115
G NGFP+ PNKLFMQEAIGAEYGEGFETFRQDGPLKVDVDF N++LQ+GFL+RIRYAMK
Sbjct: 59 GDVNGFPLKPNKLFMQEAIGAEYGEGFETFRQDGPLKVDVDFWNEKLQDGFLQRIRYAMK 118
Query: 116 PDEAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVL 174
PDEAYGLIFSWD VVADTR+LKL AWKQLA EEGKEI +E D+ R +L AGADHVL KVL
Sbjct: 119 PDEAYGLIFSWDNVVADTRSLKLEAWKQLAAEEGKEITEEVDIQRLMLYAGADHVLRKVL 178
Query: 175 LWGKEESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMV 234
W K +S++DRL RL+++YYD+LL +TEP EGL++WLDAV++ARIPCAVVS LDR+ M+
Sbjct: 179 FWEKTQSKIDRLKLRLSEIYYDSLLKLTEPKEGLRDWLDAVTTARIPCAVVSNLDRKNMI 238
Query: 235 EALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCT 294
ALERMGL KYFQA+VSEEDGMES+AHRFLSAAVKLDRKPSKCVVFEDDPR ITAAHNCT
Sbjct: 239 NALERMGLQKYFQAMVSEEDGMESIAHRFLSAAVKLDRKPSKCVVFEDDPRGITAAHNCT 298
Query: 295 MMAVGLIGAHRAYDLVQADLAVANFNELSVINLRRLFANKGSTFMERQKQIVEKVPPKRK 354
MMAVGLIGAHRAYDLVQADLAV NF ELSVINLRRLFANKGSTFM+ +KQI+EK PPKRK
Sbjct: 299 MMAVGLIGAHRAYDLVQADLAVGNFYELSVINLRRLFANKGSTFMDHEKQIIEKSPPKRK 358
Query: 355 LTIDTIF 361
LTIDTIF
Sbjct: 359 LTIDTIF 365
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|14532506|gb|AAK63981.1| AT3g10970/F9F8_21 [Arabidopsis thaliana] gi|22137294|gb|AAM91492.1| AT3g10970/F9F8_21 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 273/367 (74%), Positives = 308/367 (83%), Gaps = 11/367 (2%)
Query: 4 MDCTYSNIRSTSLLIPSRPTLSSAHHLF-------FPSTLKLSKFKRLVIRNACGFD-EN 55
MDC+ S R +SLLI S P+ H F P KL K +RLV+R++ G D +N
Sbjct: 1 MDCSCST-RPSSLLISSEPSFRFPHSNFSSNLSFQIPKDTKLVK-QRLVVRSSSGSDYQN 58
Query: 56 GSFNGFPITPNKLFMQEAIGAEYGEGFETFRQDGPLKVDVDFLNDRLQEGFLKRIRYAMK 115
G NGFP+ PNKLFMQEAIGAEYGEGFETFRQDGPLKVDVDF N++LQ+GFL+RIRYAMK
Sbjct: 59 GDVNGFPLKPNKLFMQEAIGAEYGEGFETFRQDGPLKVDVDFWNEKLQDGFLQRIRYAMK 118
Query: 116 PDEAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVL 174
PDEAYGLIFSWD VVADTR LKL AWKQLA EEGKEI +E D+ R +L AGADHVL KVL
Sbjct: 119 PDEAYGLIFSWDNVVADTRGLKLEAWKQLAAEEGKEITEEVDIQRLMLYAGADHVLRKVL 178
Query: 175 LWGKEESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMV 234
W K +S++DRL RL+++YYD+LL +TEP EGL++WLDAV++ARIPCAVVS LDR+ M+
Sbjct: 179 FWEKTQSKIDRLKLRLSEIYYDSLLKLTEPKEGLRDWLDAVTTARIPCAVVSNLDRKNMI 238
Query: 235 EALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCT 294
ALERMGL KYFQA+VSE DGMES+AHRFLSAAVKLDRKPSKCVVFEDDPR ITAAHNCT
Sbjct: 239 NALERMGLQKYFQAVVSEGDGMESIAHRFLSAAVKLDRKPSKCVVFEDDPRGITAAHNCT 298
Query: 295 MMAVGLIGAHRAYDLVQADLAVANFNELSVINLRRLFANKGSTFMERQKQIVEKVPPKRK 354
MMAVGLIGAHRAYDLVQADLAV NF ELSVINLRRLFANKGSTFM+ +KQI+EK PPKRK
Sbjct: 299 MMAVGLIGAHRAYDLVQADLAVGNFYELSVINLRRLFANKGSTFMDHEKQIIEKSPPKRK 358
Query: 355 LTIDTIF 361
LTIDTIF
Sbjct: 359 LTIDTIF 365
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297833886|ref|XP_002884825.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297330665|gb|EFH61084.1| predicted protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 271/367 (73%), Positives = 309/367 (84%), Gaps = 11/367 (2%)
Query: 4 MDCTYSNIRSTSLLIPSRPTLSSAHHLF-------FPSTLKLSKFKRLVIRNACGFD-EN 55
MDC+ S R +SLLI S P+ H F P KL K +RLV+R++ G D +N
Sbjct: 1 MDCSCST-RPSSLLISSEPSFRFPHSNFSKNLSFQIPKDTKLVK-QRLVVRSSSGSDYQN 58
Query: 56 GSFNGFPITPNKLFMQEAIGAEYGEGFETFRQDGPLKVDVDFLNDRLQEGFLKRIRYAMK 115
G NGFP+ PNKLFMQEAIGAEYGEGFETFRQDGPLKVDVDF N++LQ+GFL+RIRYAMK
Sbjct: 59 GDVNGFPLKPNKLFMQEAIGAEYGEGFETFRQDGPLKVDVDFWNEKLQDGFLQRIRYAMK 118
Query: 116 PDEAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVL 174
PDEAYGLIFSWD VVADTR+LKL AWKQLA EEGKEI +E D+ R +L AGADHVL KVL
Sbjct: 119 PDEAYGLIFSWDNVVADTRSLKLEAWKQLAAEEGKEITEEVDIQRLMLYAGADHVLSKVL 178
Query: 175 LWGKEESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMV 234
W K +S++DRL RL+++YYD+LL +T+P EGL++WLDAV++ARIPCAVVS LDR+ M+
Sbjct: 179 YWEKTQSKIDRLKLRLSEIYYDSLLKLTKPKEGLRDWLDAVTTARIPCAVVSNLDRKNMI 238
Query: 235 EALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCT 294
AL+RMGL KYFQA+VSEEDGMES+AHRFLSAAVKLDRKPSKCVVFEDDPR ITAAHNCT
Sbjct: 239 NALDRMGLQKYFQAMVSEEDGMESIAHRFLSAAVKLDRKPSKCVVFEDDPRGITAAHNCT 298
Query: 295 MMAVGLIGAHRAYDLVQADLAVANFNELSVINLRRLFANKGSTFMERQKQIVEKVPPKRK 354
MMAVGLIGAHRAYDLVQADLAV NF ELSVINLRRLFANKG TFM+ +KQI+EK PPKRK
Sbjct: 299 MMAVGLIGAHRAYDLVQADLAVGNFYELSVINLRRLFANKGCTFMDHEKQIIEKSPPKRK 358
Query: 355 LTIDTIF 361
LTIDTIF
Sbjct: 359 LTIDTIF 365
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449457419|ref|XP_004146446.1| PREDICTED: uncharacterized protein LOC101211766 [Cucumis sativus] gi|449522998|ref|XP_004168512.1| PREDICTED: uncharacterized LOC101211766 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 543 bits (1400), Expect = e-152, Method: Compositional matrix adjust.
Identities = 267/367 (72%), Positives = 301/367 (82%), Gaps = 9/367 (2%)
Query: 4 MDCTYSNIRSTSLLIPSRPTLSSAH-HLFFPSTLKLSKFKRL-------VIRNACGFDEN 55
MDCT SN RS++ + PT SS F S LK KR+ V+ + G +EN
Sbjct: 1 MDCTCSNFRSSTAPLSWTPTSSSRFPQSQFVSKLKFRNLKRMNLTKHSMVVMSVSGSNEN 60
Query: 56 GSFNGFPITPNKLFMQEAIGAEYGEGFETFRQDGPLKVDVDFLNDRLQEGFLKRIRYAMK 115
GS + FP+TPNKLFMQE IGAEYGEGFETFR DGP+KVDVDFLNDRLQEGFL+RIRYAMK
Sbjct: 61 GSLDRFPLTPNKLFMQEVIGAEYGEGFETFRPDGPMKVDVDFLNDRLQEGFLQRIRYAMK 120
Query: 116 PDEAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVL 174
PDEAYGLIFSWD VVADT+ LKLNAWKQLA EEGK +P++GD+ + +L GAD VL K+L
Sbjct: 121 PDEAYGLIFSWDNVVADTQTLKLNAWKQLASEEGKRVPEDGDIQKLMLYEGADQVLQKLL 180
Query: 175 LWGKEESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMV 234
WG ESELDRL R TQLYY LLS+ P+EGL+EWLDAVS+ARIPCA+VS LDR+ M+
Sbjct: 181 RWGMAESELDRLKLRFTQLYYRGLLSLKTPVEGLKEWLDAVSTARIPCAIVSSLDRKHML 240
Query: 235 EALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCT 294
EAL++M L KYFQAI++EEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPR ITAAHNCT
Sbjct: 241 EALDQMSLKKYFQAIITEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRGITAAHNCT 300
Query: 295 MMAVGLIGAHRAYDLVQADLAVANFNELSVINLRRLFANKGSTFMERQKQIVEKVPPKRK 354
MMA+ LIGAHRAYDLVQADLAV ++NELSVINLRRLFANKGSTFM+ QKQ VEK P KRK
Sbjct: 301 MMAIALIGAHRAYDLVQADLAVGSYNELSVINLRRLFANKGSTFMDLQKQSVEKAPSKRK 360
Query: 355 LTIDTIF 361
LTIDTIF
Sbjct: 361 LTIDTIF 367
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225448631|ref|XP_002274357.1| PREDICTED: uncharacterized protein LOC100262145 [Vitis vinifera] gi|297736518|emb|CBI25389.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 536 bits (1382), Expect = e-150, Method: Compositional matrix adjust.
Identities = 261/337 (77%), Positives = 294/337 (87%), Gaps = 7/337 (2%)
Query: 32 FPSTLKLSKFK------RLVIRNACGFDENGSFNGFPITPNKLFMQEAIGAEYGEGFETF 85
FP+ L+ SK K R VI+NACGF ENGS NG PITPNK+FM+EAIGAEYGEGFE+F
Sbjct: 24 FPAKLRSSKLKGSNLVNRPVIKNACGFGENGSVNGSPITPNKVFMEEAIGAEYGEGFESF 83
Query: 86 RQDGPLKVDVDFLNDRLQEGFLKRIRYAMKPDEAYGLIFSWD-VVADTRALKLNAWKQLA 144
R +G LKVDVDFLN+RLQEGFLKRIRYAMKPDEAYGLIFSWD VVADTR+LKLNAWKQLA
Sbjct: 84 RPNGLLKVDVDFLNNRLQEGFLKRIRYAMKPDEAYGLIFSWDNVVADTRSLKLNAWKQLA 143
Query: 145 FEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLYYDNLLSVTEP 204
EEGKEIP++ DV R +L AGADHVL K+LLW ESELDRL SRL+QLYYDNLL + +P
Sbjct: 144 SEEGKEIPEDSDVQRLMLCAGADHVLRKLLLWETSESELDRLKSRLSQLYYDNLLELRKP 203
Query: 205 MEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFL 264
+EGL+EWLDAVS++RIPCAVVS LDR+ MVEALE MG+ KYFQAIV+EEDGMESMAHR L
Sbjct: 204 VEGLEEWLDAVSTSRIPCAVVSSLDRKNMVEALEGMGIKKYFQAIVTEEDGMESMAHRLL 263
Query: 265 SAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNELSV 324
SAA+KLDRKPSKCVVFEDDPR +TAAHNCTMMAV LIGA+ AYDL QADLAV +FNELSV
Sbjct: 264 SAAMKLDRKPSKCVVFEDDPRGVTAAHNCTMMAVALIGAYPAYDLEQADLAVGSFNELSV 323
Query: 325 INLRRLFANKGSTFMERQKQIVEKVPPKRKLTIDTIF 361
INLRRLFA++GS FM+ QKQIV K PP+R++T DTIF
Sbjct: 324 INLRRLFAHRGSDFMDLQKQIVGKAPPRRRITTDTIF 360
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224145920|ref|XP_002325812.1| predicted protein [Populus trichocarpa] gi|222862687|gb|EEF00194.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 527 bits (1357), Expect = e-147, Method: Compositional matrix adjust.
Identities = 261/336 (77%), Positives = 288/336 (85%), Gaps = 7/336 (2%)
Query: 30 LFFPSTLKLSKFK---RLVIRNACGFDENGSFNGFPITPNKLFMQEAIGAEYGEGFETFR 86
LF S LKL K K RLVI+NACGFD N +G P++P KLFMQEAIGAEYGEGFETFR
Sbjct: 36 LFSHSKLKLPKLKANHRLVIKNACGFDNN---DGLPVSPKKLFMQEAIGAEYGEGFETFR 92
Query: 87 QDGPLKVDVDFLNDRLQEGFLKRIRYAMKPDEAYGLIFSWD-VVADTRALKLNAWKQLAF 145
QDG LKVDVDFLND+LQEGFL R+RYAMKPDEAYGL+FSWD VVADTR++KLN WKQLA
Sbjct: 93 QDGLLKVDVDFLNDKLQEGFLHRVRYAMKPDEAYGLVFSWDNVVADTRSIKLNVWKQLAI 152
Query: 146 EEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLYYDNLLSVTEPM 205
EEGKEIP++ R +L A ADH+LHK LLW ESE+ RL RL+QLY+ NLL + EP+
Sbjct: 153 EEGKEIPEDELAQRLMLYADADHILHKGLLWETAESEVVRLKLRLSQLYHANLLGLREPI 212
Query: 206 EGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLS 265
EGL+EWLDAVS IPCAVVS LDR MV ALERMGL KYFQAIVSEEDGMES+AHRFLS
Sbjct: 213 EGLEEWLDAVSRVHIPCAVVSCLDRINMVGALERMGLKKYFQAIVSEEDGMESIAHRFLS 272
Query: 266 AAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNELSVI 325
AA+KLDRKPSKCVVFEDDPR I AAHNCTMMAVGLIGAH AYDLVQADLAVA+FNELSVI
Sbjct: 273 AAMKLDRKPSKCVVFEDDPRGIAAAHNCTMMAVGLIGAHPAYDLVQADLAVASFNELSVI 332
Query: 326 NLRRLFANKGSTFMERQKQIVEKVPPKRKLTIDTIF 361
NLRRLFANKGSTFM+RQK+IVEK PPKRKL++DTI+
Sbjct: 333 NLRRLFANKGSTFMDRQKEIVEKSPPKRKLSVDTIY 368
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 361 | ||||||
| TAIR|locus:2085507 | 365 | AT3G10970 [Arabidopsis thalian | 0.986 | 0.975 | 0.746 | 4.3e-141 | |
| TAIR|locus:2123141 | 373 | AT4G11570 [Arabidopsis thalian | 0.653 | 0.632 | 0.293 | 4.2e-24 | |
| TIGR_CMR|DET_0395 | 456 | DET_0395 "glycoprotease family | 0.545 | 0.432 | 0.254 | 1.8e-09 | |
| UNIPROTKB|O06995 | 226 | yvdM "Beta-phosphoglucomutase" | 0.540 | 0.862 | 0.271 | 2.5e-08 | |
| TIGR_CMR|GSU_0184 | 215 | GSU_0184 "HAD-superfamily hydr | 0.487 | 0.818 | 0.259 | 1.5e-06 | |
| UNIPROTKB|P77475 | 188 | yqaB [Escherichia coli K-12 (t | 0.476 | 0.914 | 0.289 | 1.6e-06 | |
| UNIPROTKB|P77366 | 219 | ycjU "beta-phosphoglucomutase" | 0.493 | 0.812 | 0.295 | 2.2e-06 | |
| TIGR_CMR|BA_4427 | 221 | BA_4427 "hydrolase, haloacid d | 0.457 | 0.746 | 0.242 | 4.9e-05 | |
| TIGR_CMR|GSU_1839 | 228 | GSU_1839 "hydrolase, haloacid | 0.581 | 0.921 | 0.252 | 7.1e-05 | |
| UNIPROTKB|Q9KN63 | 219 | VC_A0102 "CbbY family protein" | 0.465 | 0.767 | 0.269 | 0.00042 |
| TAIR|locus:2085507 AT3G10970 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1380 (490.8 bits), Expect = 4.3e-141, P = 4.3e-141
Identities = 274/367 (74%), Positives = 310/367 (84%)
Query: 4 MDCTYSNIRSTSLLIPSRPTLSSAHHLF-------FPSTLKLSKFKRLVIRNACGFD-EN 55
MDC+ S R +SLLI S P+ H F P KL K +RLV+R++ G D +N
Sbjct: 1 MDCSCST-RPSSLLISSEPSFRFPHSNFSSNLSFQIPKDTKLVK-QRLVVRSSSGSDYQN 58
Query: 56 GSFNGFPITPNKLFMQEAIGAEYGEGFETFRQDGPLKVDVDFLNDRLQEGFLKRIRYAMK 115
G NGFP+ PNKLFMQEAIGAEYGEGFETFRQDGPLKVDVDF N++LQ+GFL+RIRYAMK
Sbjct: 59 GDVNGFPLKPNKLFMQEAIGAEYGEGFETFRQDGPLKVDVDFWNEKLQDGFLQRIRYAMK 118
Query: 116 PDEAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVL 174
PDEAYGLIFSWD VVADTR+LKL AWKQLA EEGKEI +E D+ R +L AGADHVL KVL
Sbjct: 119 PDEAYGLIFSWDNVVADTRSLKLEAWKQLAAEEGKEITEEVDIQRLMLYAGADHVLRKVL 178
Query: 175 LWGKEESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMV 234
W K +S++DRL RL+++YYD+LL +TEP EGL++WLDAV++ARIPCAVVS LDR+ M+
Sbjct: 179 FWEKTQSKIDRLKLRLSEIYYDSLLKLTEPKEGLRDWLDAVTTARIPCAVVSNLDRKNMI 238
Query: 235 EALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCT 294
ALERMGL KYFQA+VSEEDGMES+AHRFLSAAVKLDRKPSKCVVFEDDPR ITAAHNCT
Sbjct: 239 NALERMGLQKYFQAVVSEEDGMESIAHRFLSAAVKLDRKPSKCVVFEDDPRGITAAHNCT 298
Query: 295 MMAVGLIGAHRAYDLVQADLAVANFNELSVINLRRLFANKGSTFMERQKQIVEKVPPKRK 354
MMAVGLIGAHRAYDLVQADLAV NF ELSVINLRRLFANKGSTFM+ +KQI+EK PPKRK
Sbjct: 299 MMAVGLIGAHRAYDLVQADLAVGNFYELSVINLRRLFANKGSTFMDHEKQIIEKSPPKRK 358
Query: 355 LTIDTIF 361
LTIDTIF
Sbjct: 359 LTIDTIF 365
|
|
| TAIR|locus:2123141 AT4G11570 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 72/245 (29%), Positives = 125/245 (51%)
Query: 121 GLIFSWD--VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGK 178
G IF W+ ++ D L +W LA EEGK P +LR++ + + +VL W +
Sbjct: 129 GAIFEWEGVLIEDNPDLDNQSWLTLAQEEGKS-PPPAFMLRRVEGMKNEQAISEVLCWSR 187
Query: 179 EESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALE 238
+ ++ R+ R +++ V +G QE+++ + + +IP A+VS R + A+
Sbjct: 188 DPVQVRRMAKRKEEIFKALHGGVYRLRDGSQEFVNVLMNNKIPMALVSTRPRETLENAVG 247
Query: 239 RMGLLKYFQAIVSEEDGMESMA--HRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMM 296
+G+ K+F IV+ ED F+ AA LD P +C+VF + + I AAH+ M
Sbjct: 248 SIGIRKFFSVIVASEDVYRGKPDPEMFIYAAQLLDFIPERCIVFGNSNQTIEAAHDGRMK 307
Query: 297 AVGLIGAHRAYDLVQADLAVANFNELSVINLRRLFANKGSTF---MERQKQIVEKVPPKR 353
V + H Y+L A+L V +ELS+I+L++L + F +E +K+ E+ P
Sbjct: 308 CVAVASKHPIYELGAAELVVRRLDELSIIDLKKLADTDLTEFEPELEMEKED-ERELPSS 366
Query: 354 KLTID 358
+ +D
Sbjct: 367 AVAVD 371
|
|
| TIGR_CMR|DET_0395 DET_0395 "glycoprotease family protein/hydrolase, beta-phosphoglucomutase family" [Dehalococcoides ethenogenes 195 (taxid:243164)] | Back alignment and assigned GO terms |
|---|
Score = 166 (63.5 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 52/204 (25%), Positives = 89/204 (43%)
Query: 126 WD---VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESE 182
WD V+AD+ + AW Q F E E D R D +++ VL +
Sbjct: 242 WDMDGVIADSAPFHMRAW-QTTFAEIGYTFSEADFYRTF-GLRNDMIIYSVLGEKSDADT 299
Query: 183 LDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGL 242
+ L R L+ + + G+ E L ++ +A A+ S + + ++G+
Sbjct: 300 IHTLADRKEHLFREYAGQEIQLFPGVIELLKSLKTAGYRMAIASSAPLANIKLVMTKLGI 359
Query: 243 LKYFQAIVSEEDGMESMAHR--FLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGL 300
YF A VSE+D + + FL +A +L P +C+V ED P + AA M + +
Sbjct: 360 GDYFLATVSEKDVTKGKPNPQIFLLSAARLCASPEECLVIEDAPAGVEAAKKAGMKCIAV 419
Query: 301 IGAHRAYDLVQADLAVANFNELSV 324
+ + L +AD+ V ++SV
Sbjct: 420 TNSQQPQALSEADMIVDTLGKISV 443
|
|
| UNIPROTKB|O06995 yvdM "Beta-phosphoglucomutase" [Bacillus subtilis subsp. subtilis str. 168 (taxid:224308)] | Back alignment and assigned GO terms |
|---|
Score = 147 (56.8 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 58/214 (27%), Positives = 95/214 (44%)
Query: 122 LIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEE 180
+IF D V+ DT AWK +A E +IP + D+ ++ + L +L++G E
Sbjct: 4 VIFDLDGVITDTAEYHFLAWKHIA--EQIDIPFDRDMNERLKGISREESLESILIFGGAE 61
Query: 181 S-----ELDRLNSRLTQLYYDNLLSVTEP---MEGLQEWLDAVSSARIPCAVVSGLDRRK 232
+ E L R + Y L+S P + G+ L + + I + S R
Sbjct: 62 TKYTNAEKQELMHRKNR-DYQMLISKLTPEDLLPGIGRLLCQLKNENIKIGLASS--SRN 118
Query: 233 MVEALERMGLLKYFQAIVSEEDGMESMAHR--FLSAAVKLDRKPSKCVVFEDDPRAITAA 290
+ L R+ ++ F AIV + FL+AA LD P+ C ED I+A
Sbjct: 119 APKILRRLAIIDDFHAIVDPTTLAKGKPDPDIFLTAAAMLDVSPADCAAIEDAEAGISAI 178
Query: 291 HNCTMMAVGLIGAHRAYDLVQADLAVANFNELSV 324
+ M AVG +G + ++ ADL V ++L++
Sbjct: 179 KSAGMFAVG-VG--QGQPMLGADLVVRQTSDLTL 209
|
|
| TIGR_CMR|GSU_0184 GSU_0184 "HAD-superfamily hydrolase, subfamily IA, variant 1" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 132 (51.5 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 48/185 (25%), Positives = 80/185 (43%)
Query: 123 IFSWD---VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKE 179
IF WD V+ +T L A + G E+ + D R L G + VL G++
Sbjct: 5 IF-WDNDGVLMETEHLYYRANAEALARVGVELSLD-DFCRISLRRG-ESVLDLAAGPGRD 61
Query: 180 ESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALER 239
+ D L ++Y+ L M G+ + L+ + R+P A+V+ R ++
Sbjct: 62 DRAADDLRLVRDEIYFRLLGEEARVMPGVLDTLERLHG-RLPMAIVTSCRRVNFLQMHRG 120
Query: 240 MGLLKYFQAIVSEEDGMESMA--HRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMA 297
GLL YF I++ ED S +L+A + P +C+ ED R +T+A +
Sbjct: 121 SGLLHYFDFILTREDYGASKPDPEPYLAACARAGLDPGRCLAIEDSERGVTSAARAGLAV 180
Query: 298 VGLIG 302
+ G
Sbjct: 181 AAIPG 185
|
|
| UNIPROTKB|P77475 yqaB [Escherichia coli K-12 (taxid:83333)] | Back alignment and assigned GO terms |
|---|
Score = 128 (50.1 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 55/190 (28%), Positives = 83/190 (43%)
Query: 118 EAY-GLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQI-LNAGADHVLHKVL 174
E Y GLIF D + DT AW+++ G + D+ I LN + + +
Sbjct: 3 ERYAGLIFDMDGTILDTEPTHRKAWREVLGHYGLQY----DIQAMIALNGSPTWRIAQAI 58
Query: 175 LWGKEESELD--RLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSS--ARIPCAVVSGLDR 230
+ +++LD L T+ LL EP+ +D V S R P AV +G +
Sbjct: 59 I-ELNQADLDPHALAREKTEAVRSMLLDSVEPLP----LVDVVKSWHGRRPMAVGTGSES 113
Query: 231 RKMVEALERMGLLKYFQAIVSEEDGM--ESMAHRFLSAAVKLDRKPSKCVVFEDDPRAIT 288
L +GL YF A+V+ + + FL A ++ +P++CVVFED I
Sbjct: 114 AIAEALLAHLGLRHYFDAVVAADHVKHHKPAPDTFLLCAQRMGVQPTQCVVFEDADFGIQ 173
Query: 289 AAHNCTMMAV 298
AA M AV
Sbjct: 174 AARAAGMDAV 183
|
|
| UNIPROTKB|P77366 ycjU "beta-phosphoglucomutase" [Escherichia coli K-12 (taxid:83333)] | Back alignment and assigned GO terms |
|---|
Score = 131 (51.2 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 57/193 (29%), Positives = 87/193 (45%)
Query: 121 GLIFSWD-VVADTRALKLNAWKQLAFEEGKEIP-QEGDVLRQILNAGADHVLHKVLLWGK 178
G+IF D V+ DT L AW+Q+A E G I Q + L+ I D L ++L G
Sbjct: 5 GVIFDLDGVITDTAHLHFQAWQQIAAEIGISIDAQFNESLKGI---SRDESLRRILQHGG 61
Query: 179 EESELD-----RLNSRLTQLYYDNL--LSVTEPMEGLQEWLDAVSSARIPCAVVS-GLDR 230
+E + + +L R LY +L L+V + G++ L + + +I + S L+
Sbjct: 62 KEGDFNSQERAQLAYRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASVSLNA 121
Query: 231 RKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAA 290
++ ALE F A S+ + FL+A L P C+ ED I A
Sbjct: 122 PTILAALELREFFT-FCADASQLKNSKPDPEIFLAACAGLGVPPQACIGIEDAQAGIDAI 180
Query: 291 HNCTMMAVGLIGA 303
+ M +VG IGA
Sbjct: 181 NASGMRSVG-IGA 192
|
|
| TIGR_CMR|BA_4427 BA_4427 "hydrolase, haloacid dehalogenase-like family" [Bacillus anthracis str. Ames (taxid:198094)] | Back alignment and assigned GO terms |
|---|
Score = 120 (47.3 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 42/173 (24%), Positives = 83/173 (47%)
Query: 122 LIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWG-KE 179
+IF +D ++ DT + ++++ E G ++P E + + I D VL++ L KE
Sbjct: 5 IIFDFDGLIVDTETIWFHSFRDAVREYGGDLPLE-EFAKCI--GTTDDVLYEYLNEQLKE 61
Query: 180 ESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALER 239
+ + L ++ L+ + + + E +G++E+L+ + A+ S R ++ LE
Sbjct: 62 KFDKYALKEKVKNLHKEKM-KIPEARDGVKEYLEEAKEMGLKIALASSSSREWVIPFLEE 120
Query: 240 MGLLKYFQAIVSEEDGMESMAHRFL-SAAVK-LDRKPSKCVVFEDDPRAITAA 290
+ + YF+ I + ED + L A++ L S+ V FED + AA
Sbjct: 121 LQIRDYFEVIKTREDVEKVKPDPALYRVAIEDLGIDSSEAVAFEDSLNGLKAA 173
|
|
| TIGR_CMR|GSU_1839 GSU_1839 "hydrolase, haloacid dehalogenase-like family" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 119 (46.9 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 57/226 (25%), Positives = 97/226 (42%)
Query: 122 LIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEG--DVLRQILNAGADHVLHKVLLWGK 178
+IF +D ++ DT L A++ + G E DV + A +V
Sbjct: 5 VIFDFDGIIVDTEPLHYRAFQAILEPIGFGYSWEAYVDVYMGYDDRDAFREAFRVRGADL 64
Query: 179 EESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALE 238
E+ EL+ L +R + + + S P G+ E + + A P A+ SG R ++ LE
Sbjct: 65 EDRELEGLIARKAAAFQEIIASGVTPYPGVVELIRNIK-ANHPVALCSGALRSDILPILE 123
Query: 239 RMGLLKYFQAIVSEEDGMES--------MAHRFLSAAVKLDR-KPSKCVVFEDDPRAITA 289
+GL F +V+ ++ S +A R L+AA + +P C+ ED P I +
Sbjct: 124 GLGLSGIFDVMVTADEVSASKPDPASYALAVRRLTAAFPNRQIRPETCIAIEDTPAGIAS 183
Query: 290 AHNCTMMAVGLIGAHRAYDLVQADLAVANFNELSVINLRRLFANKG 335
A T +G++ +Y V+ A + L+ + L L A G
Sbjct: 184 A---TGAGIGVLAVTNSYPAVRLGGARRVVDSLADVGLADLAALAG 226
|
|
| UNIPROTKB|Q9KN63 VC_A0102 "CbbY family protein" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] | Back alignment and assigned GO terms |
|---|
Score = 112 (44.5 bits), Expect = 0.00042, P = 0.00042
Identities = 49/182 (26%), Positives = 81/182 (44%)
Query: 123 IFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEES 181
IF D ++ DT + + +++ G +P +V ++ A ++ +L E
Sbjct: 10 IFDMDGLLLDTERVCMRVFQEACTACG--LPFRQEVYLSVIGCNAK-TINGILSQAYGE- 65
Query: 182 ELDRLNSRLTQLYYDNLLSVTEP-MEG---LQEWLDAVSSARIPCAVVSGLDRRKMVEAL 237
+L RL++ Q Y ++ P +G L EWL A S IP AV + + + L
Sbjct: 66 DLPRLHNEWRQRYNAVVMHEAIPHKDGVIALLEWLKARS---IPVAVATSTQKEVALIKL 122
Query: 238 ERMGLLKYFQAIVSEEDGMESMAHR--FLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTM 295
+ GL YF I + + + H +L AA +L +P +C+ FED I AA M
Sbjct: 123 QLAGLDHYFANITTGCEVTQGKPHPEIYLLAAERLGVEPQQCLAFEDSNNGIKAAMAAQM 182
Query: 296 MA 297
A
Sbjct: 183 HA 184
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 361 | |||
| PLN02575 | 381 | PLN02575, PLN02575, haloacid dehalogenase-like hyd | 9e-30 | |
| COG0637 | 221 | COG0637, COG0637, Predicted phosphatase/phosphohex | 3e-27 | |
| PLN03243 | 260 | PLN03243, PLN03243, haloacid dehalogenase-like hyd | 2e-25 | |
| TIGR02009 | 185 | TIGR02009, PGMB-YQAB-SF, beta-phosphoglucomutase f | 5e-17 | |
| TIGR01990 | 185 | TIGR01990, bPGM, beta-phosphoglucomutase | 4e-13 | |
| pfam13419 | 176 | pfam13419, HAD_2, Haloacid dehalogenase-like hydro | 9e-13 | |
| COG0546 | 220 | COG0546, Gph, Predicted phosphatases [General func | 3e-12 | |
| PRK10725 | 188 | PRK10725, PRK10725, fructose-1-P/6-phosphogluconat | 3e-08 | |
| cd01427 | 139 | cd01427, HAD_like, Haloacid dehalogenase-like hydr | 2e-07 | |
| PRK13222 | 226 | PRK13222, PRK13222, phosphoglycolate phosphatase; | 4e-07 | |
| TIGR01449 | 213 | TIGR01449, PGP_bact, 2-phosphoglycolate phosphatas | 1e-06 | |
| TIGR01509 | 177 | TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase sup | 2e-06 | |
| COG1011 | 229 | COG1011, COG1011, Predicted hydrolase (HAD superfa | 1e-05 | |
| PRK10826 | 222 | PRK10826, PRK10826, 2-deoxyglucose-6-phosphatase; | 4e-05 | |
| PLN02940 | 382 | PLN02940, PLN02940, riboflavin kinase | 5e-05 | |
| pfam13242 | 74 | pfam13242, Hydrolase_like, HAD-hyrolase-like | 1e-04 | |
| PLN02811 | 220 | PLN02811, PLN02811, hydrolase | 0.001 | |
| PLN02919 | 1057 | PLN02919, PLN02919, haloacid dehalogenase-like hyd | 0.001 | |
| TIGR02252 | 203 | TIGR02252, DREG-2, REG-2-like, HAD superfamily (su | 0.002 | |
| TIGR02253 | 221 | TIGR02253, CTE7, HAD superfamily (subfamily IA) hy | 0.004 |
| >gnl|CDD|215313 PLN02575, PLN02575, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 117 bits (294), Expect = 9e-30
Identities = 67/219 (30%), Positives = 115/219 (52%), Gaps = 15/219 (6%)
Query: 121 GLIFSWD--VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGK 178
G IF W+ ++ D L+ AW LA EEGK P +LR++ + + +VL W +
Sbjct: 133 GAIFEWEGVIIEDNPDLENQAWLTLAQEEGKSPP-PAFILRRVEGMKNEQAISEVLCWSR 191
Query: 179 EESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALE 238
+ +EL R+ +R ++Y + G QE+++ + + +IP A+VS R+ + A+
Sbjct: 192 DPAELRRMATRKEEIYQALQGGIYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIG 251
Query: 239 RMGLLKYFQAIVSEEDGMESMAHR-------FLSAAVKLDRKPSKCVVFEDDPRAITAAH 291
+G+ +F IV+ ED +R F+ AA L+ P +C+VF + + + AAH
Sbjct: 252 SIGIRGFFSVIVAAED-----VYRGKPDPEMFIYAAQLLNFIPERCIVFGNSNQTVEAAH 306
Query: 292 NCTMMAVGLIGAHRAYDLVQADLAVANFNELSVINLRRL 330
+ M V + H Y+L ADL V +ELS+++L+ L
Sbjct: 307 DARMKCVAVASKHPIYELGAADLVVRRLDELSIVDLKNL 345
|
Length = 381 |
| >gnl|CDD|223710 COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Score = 106 bits (267), Expect = 3e-27
Identities = 65/219 (29%), Positives = 91/219 (41%), Gaps = 4/219 (1%)
Query: 121 GLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKE 179
+IF D + D+ L AW + E G EI E L + L G++
Sbjct: 4 AVIFDMDGTLVDSEPLHARAWLEALKEYGIEISDEEIRELHGGGIARIIDLLRKLAAGED 63
Query: 180 ESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALER 239
++L L L + L + P+ G+ E L+ + + IP AV S RR L R
Sbjct: 64 PADLAELERLLYEAEALELEGLK-PIPGVVELLEQLKARGIPLAVASSSPRRAAERVLAR 122
Query: 240 MGLLKYFQAIVSEEDGMESMAHR--FLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMA 297
+GLL YF IV+ +D +L AA +L P +CVV ED P I AA M
Sbjct: 123 LGLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRV 182
Query: 298 VGLIGAHRAYDLVQADLAVANFNELSVINLRRLFANKGS 336
VG+ H L D A+ L + L L +G
Sbjct: 183 VGVPAGHDRPHLDPLDAHGADTVLLDLAELPALLEARGI 221
|
Length = 221 |
| >gnl|CDD|215644 PLN03243, PLN03243, haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Score = 103 bits (257), Expect = 2e-25
Identities = 68/233 (29%), Positives = 115/233 (49%), Gaps = 5/233 (2%)
Query: 121 GLIFSWD--VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGK 178
G++ W+ +V D L+ AW+ LA EEGK P +L++ + + +VL W +
Sbjct: 26 GVVLEWEGVIVEDDSELERKAWRALAEEEGKRPP-PAFLLKRAEGMKNEQAISEVLCWSR 84
Query: 179 EESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALE 238
+ ++ RL R LY + G +E++ A+ IP AV S RR + A+E
Sbjct: 85 DFLQMKRLAIRKEDLYEYMQGGLYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIE 144
Query: 239 RMGLLKYFQAIVSEEDGMESMA--HRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMM 296
+G+ +F +++ ED F+ AA +L P +C+VF + ++ AAH+ M
Sbjct: 145 AVGMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMK 204
Query: 297 AVGLIGAHRAYDLVQADLAVANFNELSVINLRRLFANKGSTFMERQKQIVEKV 349
V + G H Y+L DL V ++LSV++L+ L F + Q+ E+V
Sbjct: 205 CVAVAGKHPVYELSAGDLVVRRLDDLSVVDLKNLSDLDSPEFQIPEPQLEEEV 257
|
Length = 260 |
| >gnl|CDD|213673 TIGR02009, PGMB-YQAB-SF, beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Score = 77.8 bits (192), Expect = 5e-17
Identities = 55/193 (28%), Positives = 81/193 (41%), Gaps = 25/193 (12%)
Query: 121 GLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEG----------DVLRQILNAGADHV 169
+IF D V+ DT L AWK +A + G ++ D+LR IL D
Sbjct: 3 AVIFDMDGVITDTAPLHAQAWKHIAAKYGISFDKQYNESLKGLSREDILRAILKLRGD-- 60
Query: 170 LHKVLLWGKEESELDRLNSRLTQLYYDNL-LSVTEPMEGLQEWLDAVSSARIPCAVVSGL 228
G E+ +L R +LY + L L+ + G++ L + + I + S
Sbjct: 61 -------GLSLEEIHQLAERKNELYRELLRLTGVAVLPGIRNLLKRLKAKGIAVGLGSSS 113
Query: 229 DRRKMVEALERMGLLKYFQAIVSEEDGMESMAH--RFLSAAVKLDRKPSKCVVFEDDPRA 286
+ L ++GL YF AIV + H FL AA L P++C+VFED
Sbjct: 114 KNAPRI--LAKLGLRDYFDAIVDASEVKNGKPHPETFLLAAELLGVPPNECIVFEDALAG 171
Query: 287 ITAAHNCTMMAVG 299
+ AA M AV
Sbjct: 172 VQAARAAGMFAVA 184
|
This subfamily model groups together three clades: the characterized beta-phosphoglucomutases (including those from E.coli, B.subtilus and L.lactis, TIGR01990), a clade of putative bPGM's from mycobacteria and a clade including the uncharacterized E.coli and H.influenzae yqaB genes which may prove to be beta-mutases of a related 1-phosphosugar. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). Length = 185 |
| >gnl|CDD|213672 TIGR01990, bPGM, beta-phosphoglucomutase | Back alignment and domain information |
|---|
Score = 66.6 bits (163), Expect = 4e-13
Identities = 60/201 (29%), Positives = 82/201 (40%), Gaps = 38/201 (18%)
Query: 121 GLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQE----------GDVLRQILNAGADHV 169
+IF D V+ DT AWK LA E G +E + L +IL+ G
Sbjct: 1 AVIFDLDGVITDTAEYHYLAWKHLADELGIPFDEEFNESLKGVSREESLERILDLG---- 56
Query: 170 LHKVLLWGKE--ESELDRLNSRLTQLYYDNLLSVTEP---MEGLQEWLDAVSSARIPCAV 224
GK+ E E + L R YY LL P + G++ L + I A+
Sbjct: 57 -------GKKYSEEEKEELAERKND-YYVELLKELTPADVLPGIKSLLADLKKNNIKIAL 108
Query: 225 VSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHR-----FLSAAVKLDRKPSKCVV 279
S + LE++ L+ YF AIV D E + FL+AA L PS+C+
Sbjct: 109 ASASKNAPTI--LEKLELIDYFDAIV---DPAELKKGKPDPEIFLAAAEGLGVSPSECIG 163
Query: 280 FEDDPRAITAAHNCTMMAVGL 300
ED I A M AVG+
Sbjct: 164 IEDAQAGIEAIKAAGMFAVGV 184
|
This model represents the beta-phosphoglucomutase enzyme which catalyzes the interconverison of beta-D-glucose-1-phosphate and beta-D-glucose-6-phosphate. The 6-phosphate is capable of non-enzymatic anomerization (alpha <-> beta) while the 1-phosphate is not. A separate enzyme is responsible for the isomerization of the alpha anomers. Beta-D-glucose-1-phosphate results from the phosphorylysis of maltose (2.4.1.8), trehalose (2.4.1.64) or trehalose-6-phosphate (2.4.1.216). Alternatively, these reactions can be run in the synthetic direction to create the disaccharides. All sequenced genomes which contain a member of this family also appear to contain at least one putative maltose or trehalose phosphorylase. Three species, Lactococcus, Enterococcus and Neisseria appear to contain a pair of paralogous beta-PGM's. Beta-phosphoglucomutase is a member of the haloacid dehalogenase superfamily of hydrolase enzymes. These enzymes are characterized by a series of three catalytic motifs positioned within an alpha-beta (Rossman) fold. beta-PGM contains an inserted alpha helical domain in between the first and second conserved motifs and thus is a member of subfamily IA of the superfamily. The third catalytic motif comes in three variants, the third of which, containing a conserved DD or ED, is the only one found here as well as in several other related enzymes (TIGR01509). The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 185 |
| >gnl|CDD|222115 pfam13419, HAD_2, Haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 65.4 bits (160), Expect = 9e-13
Identities = 39/182 (21%), Positives = 71/182 (39%), Gaps = 9/182 (4%)
Query: 122 LIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEE 180
+IF D + D + A + LA E + + LR+ D L +L +
Sbjct: 1 IIFDLDGTLIDFDPVIFEALRDLAAER-LGLDISAEELREAGGLPFDEALADLL--REHP 57
Query: 181 SELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERM 240
+ D + L + NL S EP + E L + + + ++S R + LE++
Sbjct: 58 IDPDEILEALLEY---NLESRLEPFPDVVELLRRLKAKGVKLVILSNGSREAVERLLEKL 114
Query: 241 GLLKYFQAIVSEEDGMESMAHR--FLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAV 298
GLL F A+ + +D + +L P + + +D P + AA + V
Sbjct: 115 GLLDLFDAVFTSDDVGARKPDPEAYERVLERLGLPPEEILFIDDSPEDLEAARAAGIKTV 174
Query: 299 GL 300
+
Sbjct: 175 HV 176
|
Length = 176 |
| >gnl|CDD|223620 COG0546, Gph, Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Score = 65.2 bits (159), Expect = 3e-12
Identities = 48/213 (22%), Positives = 83/213 (38%), Gaps = 16/213 (7%)
Query: 121 GLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVL---LW 176
++F D + D+ L A+ E G E ++ + I G D ++ ++L
Sbjct: 6 AILFDLDGTLVDSAEDILRAFNAALAELGLPPLDEEEIRQLIGL-GLDELIERLLGEADE 64
Query: 177 GKEESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEA 236
++RL Y + L S G++E L A+ SA +V+ R++
Sbjct: 65 EAAAELVERLREEFLTAYAELLESR--LFPGVKELLAALKSAGYKLGIVTNKPERELDIL 122
Query: 237 LERMGLLKYFQAIVSEEDGMES----MAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHN 292
L+ +GL YF IV +D L + LD P + ++ D I AA
Sbjct: 123 LKALGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLD--PEEALMVGDSLNDILAAKA 180
Query: 293 CTMMAVGL---IGAHRAYDLVQADLAVANFNEL 322
+ AVG+ + AD+ + + EL
Sbjct: 181 AGVPAVGVTWGYNSREELAQAGADVVIDSLAEL 213
|
Length = 220 |
| >gnl|CDD|182679 PRK10725, PRK10725, fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 52.4 bits (126), Expect = 3e-08
Identities = 57/196 (29%), Positives = 84/196 (42%), Gaps = 37/196 (18%)
Query: 121 GLIFSWD-VVADTRALKLNAWKQ------LAFEEGKEIPQEGDVLRQILNAGADHVLHKV 173
GLIF D + DT AW++ L F+E + G +I A +
Sbjct: 7 GLIFDMDGTILDTEPTHRKAWREVLGRYGLQFDEQAMVALNGSPTWRIAQAIIEL----- 61
Query: 174 LLWGKEESELD--RLNSRLTQLYYDNLLSVTEP---MEGLQEWLDAVSSARIPCAVVSGL 228
+++LD L T+ LL EP +E ++ W R P AV +G
Sbjct: 62 -----NQADLDPHALAREKTEAVKSMLLDSVEPLPLIEVVKAW-----HGRRPMAVGTGS 111
Query: 229 DRRKMVEALER-MGLLKYFQAIVSEEDGMESMAHR-----FLSAAVKLDRKPSKCVVFED 282
+ + EAL +GL +YF A+V+ +D H+ FL A + +P++CVVFED
Sbjct: 112 ESA-IAEALLAHLGLRRYFDAVVAADD---VQHHKPAPDTFLRCAQLMGVQPTQCVVFED 167
Query: 283 DPRAITAAHNCTMMAV 298
I AA M AV
Sbjct: 168 ADFGIQAARAAGMDAV 183
|
Length = 188 |
| >gnl|CDD|119389 cd01427, HAD_like, Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Score = 49.3 bits (118), Expect = 2e-07
Identities = 23/123 (18%), Positives = 41/123 (33%), Gaps = 18/123 (14%)
Query: 195 YDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEED 254
+ E G++E L + I A+ + RR+++E LE +GL YF +++
Sbjct: 16 GIAEIEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNG 75
Query: 255 GMESMAHR------------------FLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMM 296
L+A L P + ++ D I A +
Sbjct: 76 AAIYYPKEGLFLGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGL 135
Query: 297 AVG 299
V
Sbjct: 136 GVA 138
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. Length = 139 |
| >gnl|CDD|237310 PRK13222, PRK13222, phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 49.8 bits (120), Expect = 4e-07
Identities = 44/182 (24%), Positives = 76/182 (41%), Gaps = 19/182 (10%)
Query: 154 EGDVLRQILNAGADHVLHKVLLWGKEE---SELDRLNSRLTQLYYDNLLSVTEPMEGLQE 210
E V + N GAD ++ + L W E L++L + Y +N+ + G++E
Sbjct: 42 EERVRTWVGN-GADVLVERALTWAGREPDEELLEKLRELFDRHYAENVAGGSRLYPGVKE 100
Query: 211 WLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHR------FL 264
L A+ +A P AVV+ + LE +G+ YF ++ G +S+ ++ L
Sbjct: 101 TLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVI----GGDSLPNKKPDPAPLL 156
Query: 265 SAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGL----IGAHRAYDLVQADLAVANFN 320
A KL P + + D I AA +VG+ + D+ + +F
Sbjct: 157 LACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALS-EPDVVIDHFA 215
Query: 321 EL 322
EL
Sbjct: 216 EL 217
|
Length = 226 |
| >gnl|CDD|130516 TIGR01449, PGP_bact, 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Score = 48.3 bits (115), Expect = 1e-06
Identities = 46/194 (23%), Positives = 75/194 (38%), Gaps = 18/194 (9%)
Query: 141 KQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDR---LNSRLTQLYYDN 197
LA + + G ++ +VL W +E + R L + Y +
Sbjct: 22 MALAALGLPPATL--ARVIGFIGNGVPVLMERVLAWAGQEPDAQRVAELRKLFDRHYEEV 79
Query: 198 LLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGME 257
+T G++ L A+ + + +V+ LE +GL KYF ++ G +
Sbjct: 80 AGELTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLI----GGD 135
Query: 258 SMAHR------FLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHR---AYD 308
S+A R L AA +L P + V D I AA +V L +R A D
Sbjct: 136 SLAQRKPHPDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAID 195
Query: 309 LVQADLAVANFNEL 322
L+ D+ + NEL
Sbjct: 196 LLPPDVLYDSLNEL 209
|
PGP is an essential enzyme in the glycolate salvage pathway in higher organisms (photorespiration in plants). Phosphoglycolate results from the oxidase activity of RubisCO in the Calvin cycle when concentrations of carbon dioxide are low relative to oxygen. In Ralstonia (Alcaligenes) eutropha and Rhodobacter sphaeroides, the PGP gene (CbbZ) is located on an operon along with other Calvin cycle enzymes including RubisCO. The only other pertinent experimental evidence concerns the gene from E. coli. The in vitro activity of the Ralstonia and Escherichia enzymes was determined with crude cell extracts of strains containing PGP on expression plasmids and compared to controls. In E. coli, however, there does not appear to be a functional Calvin cycle (RubisCO is absent), although the E. coli PGP gene (gph) is on the same operon (dam) with ribulose-5-phosphate-3-epimerase (rpe), a gene in the pentose-phosphate pathway (along with other, unrelated genes). The E. coli enzyme is not expressed under normal laboratory conditions; the pathway to which it belongs has not been determined. In fact, the possibility exists, although unlikely, that the E. coli enzyme and others within this equivalog have as their physiological substrate another, closely related molecule. The other seed chosen for this model, from Xylella fastidiosa has no experimental evidence, but is a plant pathogen and thus may obtain phosphoglycolate from its host. This model has been restricted to encompass only proteobacteria as no related PGP has been verified outside of this clade. Sequences from Aquifex aeolicus and Treponema pallidum fall between the trusted and noise cutoffs. Just below the noise cutoff is a gene which is part of the operon for the biosynthesis of the blue pigment, indigoidine, from Erwinia (Pectobacterium) chrysanthemi, a plant pathogen. It does not seem likely, considering the proposed biosynthetic mechanism, that the dephosphorylation of phosphoglycolate or a closely related compound is required. Possibly, this gene is fortuitously located in this operon, or has an indirect relationship to the necessity for the biosynthesis of this compound. Sequences from 11 species have been annotated as PGP or putative PGP but fall below the noise cutoff. None of these have experimental validation. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702) [Energy metabolism, Sugars]. Length = 213 |
| >gnl|CDD|233443 TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Score = 47.0 bits (112), Expect = 2e-06
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 4/112 (3%)
Query: 192 QLYYDNLLSV-TEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIV 250
QL+Y+ L +P+ G++ L+A+ + A+++ R LE +GL F ++
Sbjct: 67 QLFYEALEKEGLKPLPGVRALLEALRARGKKLALLTNSPRADAKLVLE-LGLRALFDVVI 125
Query: 251 SEED-GMESMAHRFLSAAVK-LDRKPSKCVVFEDDPRAITAAHNCTMMAVGL 300
D G+ A+K L KPS+C+ +D P I AA M V +
Sbjct: 126 DSSDVGLGKPDPDIYLQALKKLGLKPSECLFVDDSPAGIDAAKAAGMHTVLV 177
|
This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that representing it with a single model is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 3 (this model) is found in the enzymes beta-phosphoglucomutase (TIGR01990) and deoxyglucose-6-phosphatase, while many other enzymes of subfamily IA exhibit this variant as well as variant 1 (TIGR01549). These three variant models were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 177 |
| >gnl|CDD|223943 COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Score = 45.7 bits (108), Expect = 1e-05
Identities = 34/161 (21%), Positives = 55/161 (34%), Gaps = 6/161 (3%)
Query: 167 DHVLHKVLLWGKEESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVS 226
++ L L E L ++ L + L + E L + +++
Sbjct: 63 EYGLTLERLLELLERLLGDEDAELVEELLAALAKLLPDYPEALEALKE-LGKKYKLGILT 121
Query: 227 GLDRRKMVEALERMGLLKYFQAIV-SEEDGMESMAHR-FLSAAVKLDRKPSKCVVFEDDP 284
R L ++GLL YF A+ SE+ G+ F A KL P + + D
Sbjct: 122 NGARPHQERKLRQLGLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEALFVGDSL 181
Query: 285 RA-ITAAHNCTMMAVGLI--GAHRAYDLVQADLAVANFNEL 322
I A M V + G L D +++ EL
Sbjct: 182 ENDILGARALGMKTVWINRGGKPLPDALEAPDYEISSLAEL 222
|
Length = 229 |
| >gnl|CDD|236770 PRK10826, PRK10826, 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 43.8 bits (104), Expect = 4e-05
Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 10/133 (7%)
Query: 203 EPMEGLQEWLDAVSSA--RIPCAVVSGLDRRKMVEA-LERMGLLKYFQAIVSEEDGMESM 259
+ G++E L + +I A S L M+EA L L YF A+ S E S
Sbjct: 92 PLLPGVREALALCKAQGLKIGLASASPLH---MLEAVLTMFDLRDYFDALASAEKLPYSK 148
Query: 260 AHR--FLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYD--LVQADLA 315
H +L+ A KL P CV ED + AA M ++ + + D AD+
Sbjct: 149 PHPEVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVK 208
Query: 316 VANFNELSVINLR 328
+ + EL+ +L
Sbjct: 209 LESLTELTAADLL 221
|
Length = 222 |
| >gnl|CDD|178528 PLN02940, PLN02940, riboflavin kinase | Back alignment and domain information |
|---|
Score = 44.4 bits (105), Expect = 5e-05
Identities = 31/119 (26%), Positives = 50/119 (42%), Gaps = 6/119 (5%)
Query: 184 DRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALE-RMGL 242
D NS +T L + ++ + + G + + S +P A+ S R + + G
Sbjct: 75 DEFNSEITPLLSEQWCNI-KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGW 133
Query: 243 LKYFQAIVSE---EDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAV 298
+ F IV E G S FL AA +L+ +PS C+V ED + A M +
Sbjct: 134 KESFSVIVGGDEVEKGKPS-PDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVI 191
|
Length = 382 |
| >gnl|CDD|222003 pfam13242, Hydrolase_like, HAD-hyrolase-like | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 1e-04
Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 5/65 (7%)
Query: 263 FLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVG-LIGAHRAYDL----VQADLAVA 317
+A +L P +CV+ D I AA + + L G A DL + D V
Sbjct: 10 LRAALERLGVDPEECVMIGDSDTDILAARAAGIRTILVLTGVTTAEDLERAPGRPDYVVD 69
Query: 318 NFNEL 322
+ +L
Sbjct: 70 SLADL 74
|
Length = 74 |
| >gnl|CDD|178407 PLN02811, PLN02811, hydrolase | Back alignment and domain information |
|---|
Score = 39.7 bits (93), Expect = 0.001
Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 8/109 (7%)
Query: 198 LLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMG-LLKYFQAIVSEEDGM 256
L ++ M G + + + + IP A+ +G +R +R G L +V+ +D
Sbjct: 73 LFPTSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPE 132
Query: 257 ESMAHR----FLSAAVKL---DRKPSKCVVFEDDPRAITAAHNCTMMAV 298
FL+AA + P K +VFED P + AA N M V
Sbjct: 133 VKQGKPAPDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVV 181
|
Length = 220 |
| >gnl|CDD|215497 PLN02919, PLN02919, haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Score = 41.0 bits (96), Expect = 0.001
Identities = 31/77 (40%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 223 AVVSGLDRRKMVEALERMGL-LKYFQAIVSEEDGMESMAHR---FLSAAVKLDRKPSKCV 278
AV S DR K+ L GL L F AIVS D E++ FL+AA L S+CV
Sbjct: 181 AVASSADRIKVDANLAAAGLPLSMFDAIVSA-DAFENLKPAPDIFLAAAKILGVPTSECV 239
Query: 279 VFEDDPRAITAAHNCTM 295
V ED + AA M
Sbjct: 240 VIEDALAGVQAARAAGM 256
|
Length = 1057 |
| >gnl|CDD|200170 TIGR02252, DREG-2, REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Score = 38.8 bits (91), Expect = 0.002
Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 3/82 (3%)
Query: 206 EGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIV-SEEDGMESMAHR-F 263
+ L + + V+S D R + LE +GLL+YF +V S E G E + F
Sbjct: 108 PDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTSYEVGAEKPDPKIF 166
Query: 264 LSAAVKLDRKPSKCVVFEDDPR 285
A + P + + D R
Sbjct: 167 QEALERAGISPEEALHIGDSLR 188
|
This family of proteins includes uncharacterized sequences from eukaryotes, cyanobacteria and Leptospira as well as the DREG-2 protein from Drosophila melanogaster which has been identified as a rhythmically (diurnally) regulated gene. This family is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called 'capping domain', or the absence of such a domain. This family is a member of subfamily 1A in which the cap domain consists of a predicted alpha helical bundle found in between the first and second catalytic motifs. A distinctive feature of this family is a conserved tandem pair of tryptophan residues in the cap domain. The most divergent sequences included within the scope of this model are from plants and have "FW" at this position instead. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. Length = 203 |
| >gnl|CDD|162787 TIGR02253, CTE7, HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Score = 38.2 bits (89), Expect = 0.004
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 223 AVVSGLDRRKMVEALERMGLLKYFQA-IVSEEDGMESMAHRFLSAAVK-LDRKPSKCVVF 280
+++ K E LER+G+ +F A I SEE+G+E + AA+K L KP + V+
Sbjct: 114 GIITDGLPVKQWEKLERLGVRDFFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEEAVMV 173
Query: 281 EDDP-RAITAAHNCTMMAV 298
D + I A N M V
Sbjct: 174 GDRLDKDIKGAKNLGMKTV 192
|
This family of sequences from archaea and metazoans includes the human uncharacterized protein CTE7. Pyrococcus species appear to have three different forms of this enzyme, so it is unclear whether all members of this family have the same function. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Length = 221 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 361 | |||
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 100.0 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 99.97 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 99.97 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 99.96 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 99.96 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 99.96 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 99.96 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 99.96 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 99.96 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 99.96 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 99.96 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 99.96 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 99.96 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 99.95 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 99.95 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 99.95 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 99.95 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 99.94 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 99.94 | |
| PLN02940 | 382 | riboflavin kinase | 99.94 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 99.94 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 99.93 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 99.93 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 99.93 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 99.93 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 99.93 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 99.93 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 99.91 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 99.91 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 99.91 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 99.9 | |
| PLN02811 | 220 | hydrolase | 99.9 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 99.89 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 99.89 | |
| KOG2914 | 222 | consensus Predicted haloacid-halidohydrolase and r | 99.88 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 99.88 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 99.87 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 99.87 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 99.87 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 99.86 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 99.86 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 99.86 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.85 | |
| PLN02954 | 224 | phosphoserine phosphatase | 99.84 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 99.83 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 99.82 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 99.81 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 99.78 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 99.77 | |
| TIGR01493 | 175 | HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su | 99.77 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 99.76 | |
| KOG3085 | 237 | consensus Predicted hydrolase (HAD superfamily) [G | 99.76 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 99.75 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 99.73 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 99.72 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 99.7 | |
| PRK06769 | 173 | hypothetical protein; Validated | 99.7 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 99.68 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 99.68 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 99.65 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.64 | |
| KOG3109 | 244 | consensus Haloacid dehalogenase-like hydrolase [Ge | 99.63 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 99.62 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 99.6 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 99.56 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 99.56 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 99.55 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 99.55 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 99.55 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 99.54 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 99.54 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.49 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 99.48 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 99.46 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 99.45 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 99.45 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 99.43 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 99.42 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 99.4 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.37 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 99.35 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 99.35 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 99.32 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 99.31 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 99.31 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 99.3 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.26 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 99.26 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 99.22 | |
| PF13242 | 75 | Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY | 99.22 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 99.2 | |
| PRK08238 | 479 | hypothetical protein; Validated | 99.18 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 99.16 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.06 | |
| COG4229 | 229 | Predicted enolase-phosphatase [Energy production a | 99.04 | |
| TIGR02244 | 343 | HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd | 99.03 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 99.03 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 99.03 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 99.01 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 99.01 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 99.0 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.97 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 98.95 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 98.93 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 98.92 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 98.92 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 98.91 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 98.9 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.88 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 98.87 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.86 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 98.8 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 98.8 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 98.78 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 98.76 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 98.73 | |
| KOG2882 | 306 | consensus p-Nitrophenyl phosphatase [Inorganic ion | 98.73 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 98.73 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 98.71 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 98.7 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 98.69 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 98.67 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 98.67 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 98.67 | |
| PLN02887 | 580 | hydrolase family protein | 98.67 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.56 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 98.56 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.56 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 98.54 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.52 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 98.49 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 98.42 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 98.4 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 98.38 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 98.34 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 98.29 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 98.29 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 98.26 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 98.24 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 98.21 | |
| PF06941 | 191 | NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol | 98.19 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.17 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 98.13 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.11 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 98.1 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 98.09 | |
| KOG2630 | 254 | consensus Enolase-phosphatase E-1 [Amino acid tran | 98.09 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 98.01 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 97.99 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 97.97 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 97.96 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 97.93 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 97.93 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 97.91 | |
| PF05761 | 448 | 5_nucleotid: 5' nucleotidase family; InterPro: IPR | 97.87 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 97.83 | |
| COG2503 | 274 | Predicted secreted acid phosphatase [General funct | 97.78 | |
| PF11019 | 252 | DUF2608: Protein of unknown function (DUF2608); In | 97.75 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 97.73 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 97.68 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 97.65 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 97.65 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 97.63 | |
| TIGR02250 | 156 | FCP1_euk FCP1-like phosphatase, phosphatase domain | 97.63 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 97.59 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 97.58 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 97.55 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 97.54 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 97.53 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 97.41 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 97.41 | |
| TIGR01658 | 274 | EYA-cons_domain eyes absent protein conserved doma | 97.4 | |
| COG3700 | 237 | AphA Acid phosphatase (class B) [General function | 97.36 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 97.34 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 97.27 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 97.24 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 97.24 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.23 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 97.22 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 97.14 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 97.1 | |
| COG4996 | 164 | Predicted phosphatase [General function prediction | 97.06 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 97.06 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 96.96 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 96.81 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 96.75 | |
| KOG2470 | 510 | consensus Similar to IMP-GMP specific 5'-nucleotid | 96.74 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 96.7 | |
| PF05152 | 297 | DUF705: Protein of unknown function (DUF705); Inte | 96.68 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 96.59 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 96.58 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 96.58 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 96.3 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 96.28 | |
| TIGR02245 | 195 | HAD_IIID1 HAD-superfamily subfamily IIID hydrolase | 95.89 | |
| COG4502 | 180 | 5'(3')-deoxyribonucleotidase [Nucleotide transport | 95.67 | |
| COG3882 | 574 | FkbH Predicted enzyme involved in methoxymalonyl-A | 95.61 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 95.31 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 95.3 | |
| COG5610 | 635 | Predicted hydrolase (HAD superfamily) [General fun | 95.16 | |
| KOG3107 | 468 | consensus Predicted haloacid dehalogenase-like hyd | 95.16 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 94.99 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 93.89 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 93.83 | |
| COG5663 | 194 | Uncharacterized conserved protein [Function unknow | 93.82 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 93.69 | |
| KOG2961 | 190 | consensus Predicted hydrolase (HAD superfamily) [G | 93.41 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 92.96 | |
| PLN02580 | 384 | trehalose-phosphatase | 92.64 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 92.25 | |
| PLN02423 | 245 | phosphomannomutase | 91.72 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 91.66 | |
| KOG3128 | 298 | consensus Uncharacterized conserved protein [Funct | 91.41 | |
| PLN02499 | 498 | glycerol-3-phosphate acyltransferase | 91.28 | |
| PF05822 | 246 | UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter | 89.06 | |
| KOG2882 | 306 | consensus p-Nitrophenyl phosphatase [Inorganic ion | 88.85 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 88.35 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 87.48 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 85.99 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 85.71 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 85.29 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 85.2 | |
| KOG4549 | 144 | consensus Magnesium-dependent phosphatase [General | 83.83 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 82.61 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 82.6 | |
| KOG2469 | 424 | consensus IMP-GMP specific 5'-nucleotidase [Nucleo | 81.84 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 81.8 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 80.78 | |
| KOG2116 | 738 | consensus Protein involved in plasmid maintenance/ | 80.48 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 80.15 |
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-31 Score=256.08 Aligned_cols=244 Identities=29% Similarity=0.498 Sum_probs=203.0
Q ss_pred CCcccchhhhHHHHHHhHHHHHhhhcCCCCceEEEEece-eccccHH-HHHHHHHHHHHHhCCCCCchHHHHHHHhcCCH
Q 018088 89 GPLKVDVDFLNDRLQEGFLKRIRYAMKPDEAYGLIFSWD-VVADTRA-LKLNAWKQLAFEEGKEIPQEGDVLRQILNAGA 166 (361)
Q Consensus 89 g~l~~dv~~~~~~~~~~~~~rir~~m~~~~~k~VIFDlD-TL~ds~~-~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~ 166 (361)
...+.|.+.+.+-+- ..+|| ...+++|||||| ||+|+.. .+..+|.++++++|++.+.. .....+.|.+.
T Consensus 108 ~~~~~~~~~~~~~~~--~~~~~-----~~~~~~VIFDlDGTLIDS~~~i~~~a~~~l~~e~G~~~~~~-e~~~~~~G~~~ 179 (381)
T PLN02575 108 PENRADNPSLHNPLL--RQERM-----GCGWLGAIFEWEGVIIEDNPDLENQAWLTLAQEEGKSPPPA-FILRRVEGMKN 179 (381)
T ss_pred CCCccccccccCHHH--HHHhc-----cCCCCEEEEcCcCcceeCHHHHHHHHHHHHHHHcCCCCCHH-HHHHHhcCCCH
Confidence 345566665555331 13342 234899999999 9999987 66689999999999876543 34456778888
Q ss_pred HHHHHHHHccCCChHHHHHHHHHHHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCccc
Q 018088 167 DHVLHKVLLWGKEESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYF 246 (361)
Q Consensus 167 ~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~F 246 (361)
...+..++.+..+...++.+...+.+.|.+.......++||+.++|+.|+++|++++|+||+.+..+...++.+|+..||
T Consensus 180 ~~~l~~ll~~~~~~~~~e~l~~~~~~~y~~~~~~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yF 259 (381)
T PLN02575 180 EQAISEVLCWSRDPAELRRMATRKEEIYQALQGGIYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFF 259 (381)
T ss_pred HHHHHHHhhccCCHHHHHHHHHHHHHHHHHHhccCCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHc
Confidence 88888877665566667777777788777766556688999999999999999999999999999999999999999999
Q ss_pred ceeEecCCCCCCC--hHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhhhHH
Q 018088 247 QAIVSEEDGMESM--AHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNELSV 324 (361)
Q Consensus 247 d~iv~~e~~~~~K--P~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~EL~~ 324 (361)
+.+++++++...| |++|..+++++|+.|++|+||||+..|+++|+++||.+|+|.+.+.......+|++++++.||..
T Consensus 260 d~Iv~sddv~~~KP~Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI~s~~EL~~ 339 (381)
T PLN02575 260 SVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVVRRLDELSI 339 (381)
T ss_pred eEEEecCcCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEECCHHHHHH
Confidence 9999999976555 67999999999999999999999999999999999999999655555555679999999999999
Q ss_pred HHHHhhHhcCCCChhh
Q 018088 325 INLRRLFANKGSTFME 340 (361)
Q Consensus 325 ~ll~~l~~~~~~~~~~ 340 (361)
..++.+++..++||=-
T Consensus 340 ~~l~~l~~~~~~~~~~ 355 (381)
T PLN02575 340 VDLKNLADIESPEFGP 355 (381)
T ss_pred HHHhhhhhcCccccCC
Confidence 9999999999999833
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.9e-30 Score=239.24 Aligned_cols=224 Identities=29% Similarity=0.499 Sum_probs=187.0
Q ss_pred CCCceEEEEece-eccccH-HHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHHHHHH
Q 018088 116 PDEAYGLIFSWD-VVADTR-ALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQL 193 (361)
Q Consensus 116 ~~~~k~VIFDlD-TL~ds~-~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~~~ 193 (361)
...+++|||||| ||+|+. ..+..+|.++++++|++.+.. ...+.+.|.+....+..++.+.........+...+...
T Consensus 21 ~~~~k~vIFDlDGTLvDS~~~~~~~a~~~~~~~~G~~~~~~-e~~~~~~G~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~ 99 (260)
T PLN03243 21 GCGWLGVVLEWEGVIVEDDSELERKAWRALAEEEGKRPPPA-FLLKRAEGMKNEQAISEVLCWSRDFLQMKRLAIRKEDL 99 (260)
T ss_pred cCCceEEEEeCCCceeCCchHHHHHHHHHHHHHcCCCCCHH-HHHHHhcCCCHHHHHHHHhccCCCHHHHHHHHHHHHHH
Confidence 345899999999 999995 677889999999999876543 33455778888888877766544444455555555555
Q ss_pred HHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcC
Q 018088 194 YYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLD 271 (361)
Q Consensus 194 ~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klg 271 (361)
+.........++||+.++|+.|+++|++++|+||+....+...++++|+..+|+.+++++++..+| |++|..+++++|
T Consensus 100 ~~~~~~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~ 179 (260)
T PLN03243 100 YEYMQGGLYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLG 179 (260)
T ss_pred HHHHHccCcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccCCCCCCCHHHHHHHHHHhC
Confidence 543333456789999999999999999999999999999999999999999999999999886555 679999999999
Q ss_pred CCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhhhHHHHHHhhHhcCCCChhh
Q 018088 272 RKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNELSVINLRRLFANKGSTFME 340 (361)
Q Consensus 272 i~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~EL~~~ll~~l~~~~~~~~~~ 340 (361)
+.|++|+||||+..|+.+|+++||.+|+|.+......+..+|++++++.+|....+..|..-...||-=
T Consensus 180 ~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~~~~el~~~~~~~~~~~~~~~~~~ 248 (260)
T PLN03243 180 FIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVRRLDDLSVVDLKNLSDLDSPEFQI 248 (260)
T ss_pred CChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeCCHHHHHHHHHhhhhccCCccccC
Confidence 999999999999999999999999999998766666666799999999999999999987777777744
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.2e-29 Score=229.60 Aligned_cols=205 Identities=17% Similarity=0.229 Sum_probs=163.8
Q ss_pred CceEEEEece-eccccHHHHHHHHHHHHHHhCCCC--Cc-hHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHHHHHH
Q 018088 118 EAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEI--PQ-EGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQL 193 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~--~~-~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~~~ 193 (361)
++++|||||| ||+|+...+..+|.++++++|... +. .+...+.+.|.+....+..++... ......+...+...
T Consensus 21 ~~k~viFDlDGTLiDs~~~~~~a~~~~~~~~g~~~g~~~~~~~~~~~~~G~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 98 (248)
T PLN02770 21 PLEAVLFDVDGTLCDSDPLHYYAFREMLQEINFNGGVPITEEFFVENIAGKHNEDIALGLFPDD--LERGLKFTDDKEAL 98 (248)
T ss_pred ccCEEEEcCCCccCcCHHHHHHHHHHHHHHhccccCCCCCHHHHHHHcCCCCHHHHHHHHcCcc--hhhHHHHHHHHHHH
Confidence 3789999999 999999999999999999997531 22 222344556777777776654432 12222333444555
Q ss_pred HHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcC
Q 018088 194 YYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLD 271 (361)
Q Consensus 194 ~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klg 271 (361)
|.........++||+.++|+.|+++|++++|+||+.+..+...++++|+.++|+.+++++++..+| |++|..+++++|
T Consensus 99 y~~~~~~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~ 178 (248)
T PLN02770 99 FRKLASEQLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECEHAKPHPDPYLKALEVLK 178 (248)
T ss_pred HHHHHHhcCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCCCCCCChHHHHHHHHHhC
Confidence 555444556889999999999999999999999999999999999999999999999999987666 579999999999
Q ss_pred CCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccc--cCcceEeCChhhhHH
Q 018088 272 RKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDL--VQADLAVANFNELSV 324 (361)
Q Consensus 272 i~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l--~~ad~vi~sl~EL~~ 324 (361)
++|++|+||||+..|+++|+++|+.+|+|........+ .++++++.++.|+..
T Consensus 179 ~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~~e~~~ 233 (248)
T PLN02770 179 VSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDYEDPKL 233 (248)
T ss_pred CChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccchhhHH
Confidence 99999999999999999999999999999433333333 369999999999653
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.4e-28 Score=218.10 Aligned_cols=203 Identities=15% Similarity=0.220 Sum_probs=164.7
Q ss_pred CceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHHHHHHHHH
Q 018088 118 EAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLYYD 196 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~ 196 (361)
++++||||+| ||+|+...+..+|.++++++|......+ ......|.+....+..+ .....+.+...+...+..
T Consensus 2 ~~~~viFD~DGTL~ds~~~~~~a~~~~~~~~~~~~~~~~-~~~~~~G~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 75 (214)
T PRK13288 2 KINTVLFDLDGTLINTNELIISSFLHTLKTYYPNQYKRE-DVLPFIGPSLHDTFSKI-----DESKVEEMITTYREFNHE 75 (214)
T ss_pred CccEEEEeCCCcCccCHHHHHHHHHHHHHHhCCCCCCHH-HHHHHhCcCHHHHHHhc-----CHHHHHHHHHHHHHHHHH
Confidence 3789999999 9999999999999999999986532222 33455677766666543 223344444445554444
Q ss_pred hcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcCCCC
Q 018088 197 NLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDRKP 274 (361)
Q Consensus 197 ~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi~p 274 (361)
.......++||+.++|+.|+++|++++|+||+....+...++.+|+..+|+.+++++++...| |+.|..++++++++|
T Consensus 76 ~~~~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~ 155 (214)
T PRK13288 76 HHDELVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKP 155 (214)
T ss_pred hhhhhcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCCH
Confidence 444456889999999999999999999999999999999999999999999999999876555 689999999999999
Q ss_pred CcEEEEcCChHHHHHHHHcCCeEEEE-eCCCCcccc--cCcceEeCChhhhHHHH
Q 018088 275 SKCVVFEDDPRAITAAHNCTMMAVGL-IGAHRAYDL--VQADLAVANFNELSVIN 326 (361)
Q Consensus 275 ~~~v~IGDs~~Di~aA~~aG~~~v~V-~g~~~~~~l--~~ad~vi~sl~EL~~~l 326 (361)
++|++|||+.+|+++|+++|+.+|+| ++......+ .+++++++++.++..++
T Consensus 156 ~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~~~~~l~~~i 210 (214)
T PRK13288 156 EEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLDKMSDLLAIV 210 (214)
T ss_pred HHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEECCHHHHHHHH
Confidence 99999999999999999999999999 554444433 36999999999998864
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-27 Score=219.08 Aligned_cols=205 Identities=20% Similarity=0.221 Sum_probs=166.7
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHHHHHHHHHh
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLYYDN 197 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~~ 197 (361)
+++|||||| ||+|+...+..+|..+++++|.+....+ ......|.+....+...... .......++...+.+.|.+.
T Consensus 12 ~k~viFD~DGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~-~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 89 (229)
T PRK13226 12 PRAVLFDLDGTLLDSAPDMLATVNAMLAARGRAPITLA-QLRPVVSKGARAMLAVAFPE-LDAAARDALIPEFLQRYEAL 89 (229)
T ss_pred CCEEEEcCcCccccCHHHHHHHHHHHHHHCCCCCCCHH-HHHHHhhhHHHHHHHHHhcc-CChHHHHHHHHHHHHHHHHh
Confidence 689999999 9999999999999999999998643332 33445566666666554332 23444455556666666665
Q ss_pred cccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcCCCCC
Q 018088 198 LLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDRKPS 275 (361)
Q Consensus 198 l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi~p~ 275 (361)
......++||+.++|+.|+++|++++|+||+....+...++.+|+..+|+.+++++++...| |++|.++++++|++|+
T Consensus 90 ~~~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~ 169 (229)
T PRK13226 90 IGTQSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVAPT 169 (229)
T ss_pred hhhcCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCChh
Confidence 55556889999999999999999999999999999999999999999999999988765555 6799999999999999
Q ss_pred cEEEEcCChHHHHHHHHcCCeEEEE-eCCCCc-cc--ccCcceEeCChhhhHHH
Q 018088 276 KCVVFEDDPRAITAAHNCTMMAVGL-IGAHRA-YD--LVQADLAVANFNELSVI 325 (361)
Q Consensus 276 ~~v~IGDs~~Di~aA~~aG~~~v~V-~g~~~~-~~--l~~ad~vi~sl~EL~~~ 325 (361)
+|++|||+.+|+.+|+++|+.+|+| +|.... .. ..+++++++++.||..+
T Consensus 170 ~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~~~el~~~ 223 (229)
T PRK13226 170 DCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQPQLLWNP 223 (229)
T ss_pred hEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCCHHHHHHH
Confidence 9999999999999999999999998 554322 22 24699999999999765
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-27 Score=216.53 Aligned_cols=207 Identities=25% Similarity=0.346 Sum_probs=170.1
Q ss_pred CceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChH---HHHHHHHHHHHH
Q 018088 118 EAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEES---ELDRLNSRLTQL 193 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~---~~~~l~~~~~~~ 193 (361)
.++.|+||+| ||+|+...+..+++.+++++|.+.... .....+.|.+....+...+....... ..+.+...+...
T Consensus 3 ~~~~iiFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (220)
T COG0546 3 MIKAILFDLDGTLVDSAEDILRAFNAALAELGLPPLDE-EEIRQLIGLGLDELIERLLGEADEEAAAELVERLREEFLTA 81 (220)
T ss_pred CCCEEEEeCCCccccChHHHHHHHHHHHHHcCCCCCCH-HHHHHHhcCCHHHHHHHHhccccchhHHHHHHHHHHHHHHH
Confidence 4789999999 999999999999999999999885333 34566778888888888766554443 333344444444
Q ss_pred HHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcC
Q 018088 194 YYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLD 271 (361)
Q Consensus 194 ~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klg 271 (361)
+.+.. ...++||+.++|..|++.|++++|+||.....+...++++|+..+|+.+++.++...+| |+.+..+++++|
T Consensus 82 ~~~~~--~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~ 159 (220)
T COG0546 82 YAELL--ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLG 159 (220)
T ss_pred HHhhc--cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCCCCCcCHHHHHHHHHHhC
Confidence 44433 35789999999999999999999999999999999999999999999999977777776 568899999999
Q ss_pred CCCCcEEEEcCChHHHHHHHHcCCeEEEE-eCCCCccc--ccCcceEeCChhhhHHHHH
Q 018088 272 RKPSKCVVFEDDPRAITAAHNCTMMAVGL-IGAHRAYD--LVQADLAVANFNELSVINL 327 (361)
Q Consensus 272 i~p~~~v~IGDs~~Di~aA~~aG~~~v~V-~g~~~~~~--l~~ad~vi~sl~EL~~~ll 327 (361)
++|++++||||+.+|+.||++||+.+|+| +|...... ..++|+++.++.||..++.
T Consensus 160 ~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~el~~~l~ 218 (220)
T COG0546 160 LDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAELLALLA 218 (220)
T ss_pred CChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECCHHHHHHHHh
Confidence 99889999999999999999999999998 55432233 3469999999999987754
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-27 Score=222.31 Aligned_cols=207 Identities=18% Similarity=0.233 Sum_probs=168.6
Q ss_pred CCCceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHHHHHHH
Q 018088 116 PDEAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLY 194 (361)
Q Consensus 116 ~~~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~ 194 (361)
|+.+++|||||| ||+|++..+..+|.++++++|.+....+ ....+.+.....++... +.+.....++...+.+.+
T Consensus 59 ~~~~k~vIFDlDGTLiDS~~~~~~a~~~~~~~~G~~~~~~~-~~~~~~g~~~~~i~~~~---~~~~~~~~~~~~~~~~~~ 134 (273)
T PRK13225 59 PQTLQAIIFDFDGTLVDSLPTVVAIANAHAPDFGYDPIDER-DYAQLRQWSSRTIVRRA---GLSPWQQARLLQRVQRQL 134 (273)
T ss_pred hhhcCEEEECCcCccccCHHHHHHHHHHHHHHCCCCCCCHH-HHHHHhCccHHHHHHHc---CCCHHHHHHHHHHHHHHH
Confidence 556899999999 9999999999999999999998644333 34455666666665552 233344455555555555
Q ss_pred HHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCC
Q 018088 195 YDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKP 274 (361)
Q Consensus 195 ~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p 274 (361)
.+. ....+++||+.++|+.|+++|++++|+||+....+...++.+|+.++|+.++++++. ..||+.+..+++++++.|
T Consensus 135 ~~~-~~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~~-~~k~~~~~~~l~~~~~~p 212 (273)
T PRK13225 135 GDC-LPALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTPI-LSKRRALSQLVAREGWQP 212 (273)
T ss_pred Hhh-cccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCCC-CCCHHHHHHHHHHhCcCh
Confidence 443 345688999999999999999999999999999999999999999999998888765 468999999999999999
Q ss_pred CcEEEEcCChHHHHHHHHcCCeEEEE-eCCCCcccc--cCcceEeCChhhhHHHHHH
Q 018088 275 SKCVVFEDDPRAITAAHNCTMMAVGL-IGAHRAYDL--VQADLAVANFNELSVINLR 328 (361)
Q Consensus 275 ~~~v~IGDs~~Di~aA~~aG~~~v~V-~g~~~~~~l--~~ad~vi~sl~EL~~~ll~ 328 (361)
++|++|||+.+|+.+|+++|+.+|+| +|.+....+ ..||++++++.+|..++.+
T Consensus 213 ~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~~~~eL~~~~~~ 269 (273)
T PRK13225 213 AAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLETPSDLLQAVTQ 269 (273)
T ss_pred hHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEECCHHHHHHHHHH
Confidence 99999999999999999999999999 444444433 3699999999999987633
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-27 Score=214.09 Aligned_cols=203 Identities=20% Similarity=0.267 Sum_probs=165.6
Q ss_pred EEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHcc---CCChHHHHHHHHHHHHHHHHh
Q 018088 122 LIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLW---GKEESELDRLNSRLTQLYYDN 197 (361)
Q Consensus 122 VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~---~~~~~~~~~l~~~~~~~~~~~ 197 (361)
|||||| ||+|+...+..+|.++++++|.+...... .....|.+....+..++.. ..+......+...+...|.+.
T Consensus 1 viFD~DGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (213)
T TIGR01449 1 VLFDLDGTLVDSAPDIAAAVNMALAALGLPPATLAR-VIGFIGNGVPVLMERVLAWAGQEPDAQRVAELRKLFDRHYEEV 79 (213)
T ss_pred CeecCCCccccCHHHHHHHHHHHHHHCCCCCCCHHH-HHHHhcccHHHHHHHHhhccccccChHHHHHHHHHHHHHHHHh
Confidence 689999 99999999999999999999986433333 3344577766666665432 223444556666666666666
Q ss_pred cccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcCCCCC
Q 018088 198 LLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDRKPS 275 (361)
Q Consensus 198 l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi~p~ 275 (361)
......++||+.++|+.|+++|++++|+||+....+...++++|+.++|+.+++++++...| |++|..+++++|++|+
T Consensus 80 ~~~~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~ 159 (213)
T TIGR01449 80 AGELTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQ 159 (213)
T ss_pred ccccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCCCCCCCChHHHHHHHHHcCCChh
Confidence 55556899999999999999999999999999999999999999999999999998876555 6899999999999999
Q ss_pred cEEEEcCChHHHHHHHHcCCeEEEE-eCCCCcccc--cCcceEeCChhhhHHH
Q 018088 276 KCVVFEDDPRAITAAHNCTMMAVGL-IGAHRAYDL--VQADLAVANFNELSVI 325 (361)
Q Consensus 276 ~~v~IGDs~~Di~aA~~aG~~~v~V-~g~~~~~~l--~~ad~vi~sl~EL~~~ 325 (361)
+|++|||+.+|+.+|+++|+.+++| +|.+....+ ..|++++.++.||..+
T Consensus 160 ~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~~~~l~~~ 212 (213)
T TIGR01449 160 QMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDSLNELPPL 212 (213)
T ss_pred HeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCCHHHHHhh
Confidence 9999999999999999999999999 444443333 3699999999998754
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-27 Score=217.33 Aligned_cols=210 Identities=20% Similarity=0.254 Sum_probs=164.8
Q ss_pred CCCceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccC-CChHHHHHHHHHHHHH
Q 018088 116 PDEAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWG-KEESELDRLNSRLTQL 193 (361)
Q Consensus 116 ~~~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~-~~~~~~~~l~~~~~~~ 193 (361)
...+++|+||+| ||+|+...+..++.++++++|.+...... .....|...+.......... ............+.+.
T Consensus 4 ~~~~k~iiFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (222)
T PRK10826 4 PRQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRREE-LPDTLGLRIDQVVDLWYARQPWNGPSRQEVVQRIIAR 82 (222)
T ss_pred cccCcEEEEcCCCCCCcCHHHHHHHHHHHHHHCCCCCCHHHH-HHHhhCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHH
Confidence 445899999999 99999999999999999999987654333 33455666555554432211 1111222333444444
Q ss_pred HHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcC
Q 018088 194 YYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLD 271 (361)
Q Consensus 194 ~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klg 271 (361)
+.+.......++||+.++|+.|+++|++++|+||+....+...++.+|+..+|+.+++++++..+| |+.|+.+++++|
T Consensus 83 ~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~ 162 (222)
T PRK10826 83 VISLIEETRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKLPYSKPHPEVYLNCAAKLG 162 (222)
T ss_pred HHHHHhcCCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcccCCCCCCCHHHHHHHHHHcC
Confidence 444444556899999999999999999999999999999999999999999999999999876555 679999999999
Q ss_pred CCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcc--cccCcceEeCChhhhHHHH
Q 018088 272 RKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAY--DLVQADLAVANFNELSVIN 326 (361)
Q Consensus 272 i~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~--~l~~ad~vi~sl~EL~~~l 326 (361)
+.|++|++|||+.+|+++|++||+.+|++....... ....+++++.++.+|....
T Consensus 163 ~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~dl~~~~ 219 (222)
T PRK10826 163 VDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLESLTELTAAD 219 (222)
T ss_pred CCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccCHHHHhhhh
Confidence 999999999999999999999999999996554332 2346899999999987653
|
|
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.7e-28 Score=220.32 Aligned_cols=205 Identities=31% Similarity=0.454 Sum_probs=156.1
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCCh--HHHHHHHHHHHHHHH
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEE--SELDRLNSRLTQLYY 195 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~--~~~~~l~~~~~~~~~ 195 (361)
+++|||||| ||+|++..+.++|.++++++|+..+.+ ......|......+..+....... ........ ......
T Consensus 2 ~~avIFD~DGvLvDse~~~~~a~~~~~~~~g~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 78 (221)
T COG0637 2 IKAVIFDMDGTLVDSEPLHARAWLEALKEYGIEISDE--EIRELHGGGIARIIDLLRKLAAGEDPADLAELER-LLYEAE 78 (221)
T ss_pred CcEEEEcCCCCcCcchHHHHHHHHHHHHHcCCCCCHH--HHHHHHCCChHHHHHHHHHHhcCCcccCHHHHHH-HHHHHH
Confidence 689999999 999999999999999999999887654 233445554444333332221111 11111111 111222
Q ss_pred HhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcCCC
Q 018088 196 DNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDRK 273 (361)
Q Consensus 196 ~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi~ 273 (361)
.......+++||+.++|..|+++|++++++|++.+..+...|+.+|+.++|+.+++++++..+| |++|+.+++++|+.
T Consensus 79 ~~~~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~ 158 (221)
T COG0637 79 ALELEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVD 158 (221)
T ss_pred HhhhcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhccHHHHhcCCCCCHHHHHHHHHcCCC
Confidence 2333556899999999999999999999999999999999999999999999999999988777 58999999999999
Q ss_pred CCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcc-----cccCcceEeCChhhhHHHH
Q 018088 274 PSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAY-----DLVQADLAVANFNELSVIN 326 (361)
Q Consensus 274 p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~-----~l~~ad~vi~sl~EL~~~l 326 (361)
|++||+|+|+++++.+|++|||.+|+|.+.+... ....++.+..++.++...+
T Consensus 159 P~~CvviEDs~~Gi~Aa~aAGm~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 216 (221)
T COG0637 159 PEECVVVEDSPAGIQAAKAAGMRVVGVPAGHDRPHLDPLDAHGADTVLLDLAELPALL 216 (221)
T ss_pred hHHeEEEecchhHHHHHHHCCCEEEEecCCCCccccchhhhhhcchhhccHHHHHHHH
Confidence 9999999999999999999999999996644421 1124566666666666543
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.6e-27 Score=212.55 Aligned_cols=216 Identities=23% Similarity=0.314 Sum_probs=178.3
Q ss_pred cCCCCceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHcc---CCChHHHHHHHHH
Q 018088 114 MKPDEAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLW---GKEESELDRLNSR 189 (361)
Q Consensus 114 m~~~~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~---~~~~~~~~~l~~~ 189 (361)
|..+++++|+||+| ||+|+...+..+|..+++++|.+..... ......+.+....+...+.+ .............
T Consensus 1 ~~~~~~~~iiFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (226)
T PRK13222 1 MKFMDIRAVAFDLDGTLVDSAPDLAAAVNAALAALGLPPAGEE-RVRTWVGNGADVLVERALTWAGREPDEELLEKLREL 79 (226)
T ss_pred CCCCcCcEEEEcCCcccccCHHHHHHHHHHHHHHCCCCCCCHH-HHHHHhCccHHHHHHHHHhhccCCccHHHHHHHHHH
Confidence 45567899999999 9999999999999999999998754433 33456677777777665543 3455666777777
Q ss_pred HHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHH
Q 018088 190 LTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAA 267 (361)
Q Consensus 190 ~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~ 267 (361)
+.+.|.........++||+.++|+.|++.|++++++||+....+..+++.+|+..+|+.++++++....| |++|..++
T Consensus 80 ~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~ 159 (226)
T PRK13222 80 FDRHYAENVAGGSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSLPNKKPDPAPLLLAC 159 (226)
T ss_pred HHHHHHHhccccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCCCCCCcChHHHHHHH
Confidence 7777777665567899999999999999999999999999999999999999999999999998865554 68999999
Q ss_pred HHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEe-CCCCcccc--cCcceEeCChhhhHHHHHHhh
Q 018088 268 VKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLI-GAHRAYDL--VQADLAVANFNELSVINLRRL 330 (361)
Q Consensus 268 ~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~-g~~~~~~l--~~ad~vi~sl~EL~~~ll~~l 330 (361)
++++++|++|++|||+.+|+++|+++|+.+|+|. |.....+. ..+++++.++.+|..++.+.|
T Consensus 160 ~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~~~~~l~~~l~~~~ 225 (226)
T PRK13222 160 EKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVIDHFAELLPLLGLAL 225 (226)
T ss_pred HHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEECCHHHHHHHHHHhc
Confidence 9999999999999999999999999999999994 43322222 469999999999998876654
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-27 Score=220.56 Aligned_cols=205 Identities=20% Similarity=0.271 Sum_probs=160.6
Q ss_pred ceEEEEece-eccccHHH-HHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHH-------------HccCCChHHH
Q 018088 119 AYGLIFSWD-VVADTRAL-KLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKV-------------LLWGKEESEL 183 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~-~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~-------------l~~~~~~~~~ 183 (361)
+++|||||| ||+|+... +..+|.++++++|.+.+.. ......|.+....+... ++.......+
T Consensus 2 ~k~viFD~DGTLiDs~~~~~~~a~~~~~~~~g~~~~~~--~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (253)
T TIGR01422 2 IEAVIFDWAGTTVDFGSFAPTQAFVEAFAEFGVQITLE--EARGPMGLGKWDHIRALLKMPAVAERWRAKFGRLPTEADI 79 (253)
T ss_pred ceEEEEeCCCCeecCCCccHHHHHHHHHHHcCCCccHH--HHHHhcCccHHHHHHHHhcCHHHHHHHHHHhCCCCCHHHH
Confidence 689999999 99998653 5789999999999765433 22334555543333221 2223344455
Q ss_pred HHHHHHHHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCccc-ceeEecCCCCCCC--h
Q 018088 184 DRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYF-QAIVSEEDGMESM--A 260 (361)
Q Consensus 184 ~~l~~~~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~F-d~iv~~e~~~~~K--P 260 (361)
..+...+...+.+.......++||+.++|+.|+++|++++|+||+....+...++.+|+..+| +.+++++++...| |
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~~~~KP~p 159 (253)
T TIGR01422 80 EAIYEAFEPLQLAKLAEYSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDVPAGRPAP 159 (253)
T ss_pred HHHHHHHHHHHHHHHHhcCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccCCCCCCCH
Confidence 566666666555555556789999999999999999999999999999999999999999986 9999999876655 6
Q ss_pred HHHHHHHHHcCCC-CCcEEEEcCChHHHHHHHHcCCeEEEE-eCCCC-----------------------cccc--cCcc
Q 018088 261 HRFLSAAVKLDRK-PSKCVVFEDDPRAITAAHNCTMMAVGL-IGAHR-----------------------AYDL--VQAD 313 (361)
Q Consensus 261 ~~~~~~~~klgi~-p~~~v~IGDs~~Di~aA~~aG~~~v~V-~g~~~-----------------------~~~l--~~ad 313 (361)
++|..+++++|+. |++|+||||+++|+.+|++||+.+|+| +|.+. ...+ .+||
T Consensus 160 ~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 239 (253)
T TIGR01422 160 WMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWTVGLILSSNELGLSEEEYRALDPAELEARRAEATARLKAAGAH 239 (253)
T ss_pred HHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeEEEEecCCcccCCCHHHHHhCCHHHHHHHHHHHHHHHHhcCCC
Confidence 7999999999995 999999999999999999999999999 45431 1233 3699
Q ss_pred eEeCChhhhHHH
Q 018088 314 LAVANFNELSVI 325 (361)
Q Consensus 314 ~vi~sl~EL~~~ 325 (361)
++++++.||..+
T Consensus 240 ~v~~~~~el~~~ 251 (253)
T TIGR01422 240 YVIDTLAELPAV 251 (253)
T ss_pred EehhcHHHHHHh
Confidence 999999998765
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=3e-27 Score=214.53 Aligned_cols=200 Identities=21% Similarity=0.281 Sum_probs=157.0
Q ss_pred CceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHHHHHHHHH
Q 018088 118 EAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLYYD 196 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~ 196 (361)
.+++|||||| ||+|+...+..+|.++++++|++. . .....+.|.+....++.+.. ......+......+ ..+..
T Consensus 2 ~~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~--~-~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~ 76 (218)
T PRK11587 2 RCKGFLFDLDGTLVDSLPAVERAWSNWADRHGIAP--D-EVLNFIHGKQAITSLRHFMA-GASEAEIQAEFTRL-EQIEA 76 (218)
T ss_pred CCCEEEEcCCCCcCcCHHHHHHHHHHHHHHcCCCH--H-HHHHHHcCCCHHHHHHHHhc-cCCcHHHHHHHHHH-HHHHH
Confidence 3789999999 999999999999999999999754 2 33445567777777766543 22333332222221 12223
Q ss_pred hcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcCCCC
Q 018088 197 NLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDRKP 274 (361)
Q Consensus 197 ~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi~p 274 (361)
.......++||+.++|+.|+++|++++|+||+........++..++ .+|+.+++++++...| |+.|..+++++|+.|
T Consensus 77 ~~~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l-~~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p 155 (218)
T PRK11587 77 TDTEGITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL-PAPEVFVTAERVKRGKPEPDAYLLGAQLLGLAP 155 (218)
T ss_pred hhhcCceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC-CCccEEEEHHHhcCCCCCcHHHHHHHHHcCCCc
Confidence 3334568899999999999999999999999988888888888998 5678899988776555 579999999999999
Q ss_pred CcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhhhH
Q 018088 275 SKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNELS 323 (361)
Q Consensus 275 ~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~EL~ 323 (361)
++|+||||+..|+++|+++|+.+|+|...........++++++++.||.
T Consensus 156 ~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~el~ 204 (218)
T PRK11587 156 QECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLHSLEQLT 204 (218)
T ss_pred ccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEecchhhee
Confidence 9999999999999999999999999955443344457999999999975
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.5e-27 Score=211.81 Aligned_cols=206 Identities=20% Similarity=0.252 Sum_probs=167.2
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHcc-CCChHHHHHHHHHHHHHHHH
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLW-GKEESELDRLNSRLTQLYYD 196 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~-~~~~~~~~~l~~~~~~~~~~ 196 (361)
+++|||||| ||+|+...+..+|.++++++|.+.+.. .....+.|......+..++.. +.......+....+.+.+..
T Consensus 1 ~k~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (220)
T TIGR03351 1 ISLVVLDMAGTTVDEDGLVYRALRQAVTAAGLSPTPE-EVQSAWMGQSKIEAIRALLALDGADEAEAQAAFADFEERLAE 79 (220)
T ss_pred CcEEEEecCCCeeccCchHHHHHHHHHHHcCCCCCHH-HHHHhhcCCCHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHH
Confidence 478999999 999999999999999999999876543 233336677777777776543 23444455556666666555
Q ss_pred hcc-cCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCC--cccceeEecCCCCCCC--hHHHHHHHHHcC
Q 018088 197 NLL-SVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLL--KYFQAIVSEEDGMESM--AHRFLSAAVKLD 271 (361)
Q Consensus 197 ~l~-~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~--~~Fd~iv~~e~~~~~K--P~~~~~~~~klg 271 (361)
... ....++||+.++|+.|+++|++++|+||+....+...++.+|+. .+|+.++++++....| |++|..+++++|
T Consensus 80 ~~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~ 159 (220)
T TIGR03351 80 AYDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTG 159 (220)
T ss_pred HhcccCCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcC
Confidence 433 24579999999999999999999999999999999999999998 9999999999876555 689999999999
Q ss_pred CC-CCcEEEEcCChHHHHHHHHcCCeE-EEEe-CCCCcccc--cCcceEeCChhhhHHH
Q 018088 272 RK-PSKCVVFEDDPRAITAAHNCTMMA-VGLI-GAHRAYDL--VQADLAVANFNELSVI 325 (361)
Q Consensus 272 i~-p~~~v~IGDs~~Di~aA~~aG~~~-v~V~-g~~~~~~l--~~ad~vi~sl~EL~~~ 325 (361)
+. |++|+||||+.+|+.+|+++|+.+ +++. +......+ .++++++.++.+|..+
T Consensus 160 ~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~~~~~l~~~ 218 (220)
T TIGR03351 160 VQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLDSVADLPAL 218 (220)
T ss_pred CCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeecCHHHHHHh
Confidence 97 799999999999999999999999 8884 33343333 3689999999998765
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-26 Score=216.65 Aligned_cols=207 Identities=20% Similarity=0.277 Sum_probs=160.3
Q ss_pred CceEEEEece-eccccHHH-HHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHH-------------HHccCCChHH
Q 018088 118 EAYGLIFSWD-VVADTRAL-KLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHK-------------VLLWGKEESE 182 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~-~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~-------------~l~~~~~~~~ 182 (361)
++++|||||| ||+|+... +..+|.++++++|.+.+.. ......|.+....+.. .++.......
T Consensus 3 ~~k~vIFDlDGTLiDs~~~~~~~a~~~~~~~~g~~~~~~--~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 80 (267)
T PRK13478 3 KIQAVIFDWAGTTVDFGSFAPTQAFVEAFAQFGVEITLE--EARGPMGLGKWDHIRALLKMPRVAARWQAVFGRLPTEAD 80 (267)
T ss_pred ceEEEEEcCCCCeecCCCccHHHHHHHHHHHcCCCCCHH--HHHHhcCCCHHHHHHHHHhcHHHHHHHHHHhCCCCCHHH
Confidence 3799999999 99998643 4789999999999865432 2234455544332222 2222234445
Q ss_pred HHHHHHHHHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCccc-ceeEecCCCCCCC--
Q 018088 183 LDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYF-QAIVSEEDGMESM-- 259 (361)
Q Consensus 183 ~~~l~~~~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~F-d~iv~~e~~~~~K-- 259 (361)
+.++...+...+.+.......++||+.++|+.|+++|++++|+||.....+...++.+++.++| +.+++++++...|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~ 160 (267)
T PRK13478 81 VDALYAAFEPLQIAKLADYATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDVPAGRPY 160 (267)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcCCCCCCC
Confidence 5556666666655555556689999999999999999999999999999999999999988875 8999998876655
Q ss_pred hHHHHHHHHHcCCC-CCcEEEEcCChHHHHHHHHcCCeEEEE-eCCCC-----------------------cccc--cCc
Q 018088 260 AHRFLSAAVKLDRK-PSKCVVFEDDPRAITAAHNCTMMAVGL-IGAHR-----------------------AYDL--VQA 312 (361)
Q Consensus 260 P~~~~~~~~klgi~-p~~~v~IGDs~~Di~aA~~aG~~~v~V-~g~~~-----------------------~~~l--~~a 312 (361)
|++|..+++++|+. |++|+||||+++|+.+|+++|+.+|+| +|.+. ...+ .+|
T Consensus 161 p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a 240 (267)
T PRK13478 161 PWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRAAGA 240 (267)
T ss_pred hHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHHHcCC
Confidence 67999999999996 699999999999999999999999999 44432 1222 369
Q ss_pred ceEeCChhhhHHHH
Q 018088 313 DLAVANFNELSVIN 326 (361)
Q Consensus 313 d~vi~sl~EL~~~l 326 (361)
|++++++.+|..++
T Consensus 241 ~~vi~~~~~l~~~l 254 (267)
T PRK13478 241 HYVIDTIADLPAVI 254 (267)
T ss_pred CeehhhHHHHHHHH
Confidence 99999999998765
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.9e-26 Score=214.23 Aligned_cols=217 Identities=21% Similarity=0.242 Sum_probs=160.1
Q ss_pred CCCCceEEEEece-eccccH-HHHHHHHHHHHHHhCCC-CCchHHHHH--HHhcCCHHHHHHHHH--ccC--------CC
Q 018088 115 KPDEAYGLIFSWD-VVADTR-ALKLNAWKQLAFEEGKE-IPQEGDVLR--QILNAGADHVLHKVL--LWG--------KE 179 (361)
Q Consensus 115 ~~~~~k~VIFDlD-TL~ds~-~~~~~a~~~~l~~~G~~-~~~~~~~~~--~~~g~~~~~~l~~~l--~~~--------~~ 179 (361)
....+++|||||| ||+|+. ..+..+|.++++++|++ .+....... ...|.+...+...+. .+. .+
T Consensus 36 ~~~~~k~VIFDlDGTLvDS~~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (286)
T PLN02779 36 ASALPEALLFDCDGVLVETERDGHRVAFNDAFKEFGLRPVEWDVELYDELLNIGGGKERMTWYFNENGWPTSTIEKAPKD 115 (286)
T ss_pred cccCCcEEEEeCceeEEccccHHHHHHHHHHHHHcCCCCCCCCHHHHHHHHccCCChHHHHHHHHHcCCCccccccCCcc
Confidence 3456899999999 999999 99999999999999983 333222211 114444444433321 111 11
Q ss_pred hHHH----HHHHHHHHHHHHHhcccC-CCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCccc---ceeEe
Q 018088 180 ESEL----DRLNSRLTQLYYDNLLSV-TEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYF---QAIVS 251 (361)
Q Consensus 180 ~~~~----~~l~~~~~~~~~~~l~~~-~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~F---d~iv~ 251 (361)
.+.. ..+.......|.+..... ..++||+.++|+.|+++|++++|+||+....+...++.++...+| +.+ +
T Consensus 116 ~e~~~~~~~~~~~~~~~~y~~~~~~~~~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v-~ 194 (286)
T PLN02779 116 EEERKELVDSLHDRKTELFKELIESGALPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVF-A 194 (286)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEE-e
Confidence 2222 223333344454443322 478999999999999999999999999999999999887443444 444 7
Q ss_pred cCCCCCCC--hHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEE-eCCCCcccccCcceEeCChhhhHHHHHH
Q 018088 252 EEDGMESM--AHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGL-IGAHRAYDLVQADLAVANFNELSVINLR 328 (361)
Q Consensus 252 ~e~~~~~K--P~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V-~g~~~~~~l~~ad~vi~sl~EL~~~ll~ 328 (361)
++++...| |++|..+++++|++|++|+||||+.+|+++|+++|+.+|+| +|.+...++..+|++++++.++....++
T Consensus 195 ~~~~~~~KP~p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~~~~l~~~~~~ 274 (286)
T PLN02779 195 GDDVPKKKPDPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDCLGDVPLEDFD 274 (286)
T ss_pred ccccCCCCCCHHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECChhhcchhhhH
Confidence 77766556 57999999999999999999999999999999999999999 5545555566799999999999988888
Q ss_pred hhHh
Q 018088 329 RLFA 332 (361)
Q Consensus 329 ~l~~ 332 (361)
.||-
T Consensus 275 ~~~~ 278 (286)
T PLN02779 275 LLFC 278 (286)
T ss_pred HHHH
Confidence 8763
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-25 Score=211.12 Aligned_cols=206 Identities=17% Similarity=0.224 Sum_probs=165.9
Q ss_pred CceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHcc-----CCChHHHHHHHHHHH
Q 018088 118 EAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLW-----GKEESELDRLNSRLT 191 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~-----~~~~~~~~~l~~~~~ 191 (361)
-+++|||||| ||+|+...+..++.++++++|.+....+. ...+.+.+...++...+.. ..+..........+.
T Consensus 12 ~~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~-~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 90 (272)
T PRK13223 12 LPRLVMFDLDGTLVDSVPDLAAAVDRMLLELGRPPAGLEA-VRHWVGNGAPVLVRRALAGSIDHDGVDDELAEQALALFM 90 (272)
T ss_pred cCCEEEEcCCCccccCHHHHHHHHHHHHHHcCCCCCCHHH-HHHHhChhHHHHHHHHhcccccccCCCHHHHHHHHHHHH
Confidence 4789999999 99999999999999999999987654332 3455677766666654431 233444555555555
Q ss_pred HHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHH
Q 018088 192 QLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVK 269 (361)
Q Consensus 192 ~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~k 269 (361)
+.|.... ....++||+.++|+.|+++|++++|+||++...+...++.+++..+|+.++++++....| |+.|+.++++
T Consensus 91 ~~~~~~~-~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~ 169 (272)
T PRK13223 91 EAYADSH-ELTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTLPQKKPDPAALLFVMKM 169 (272)
T ss_pred HHHHhcC-cCCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCCCCCCCCCcHHHHHHHHH
Confidence 5555432 335789999999999999999999999999999999999999999999999998876555 5799999999
Q ss_pred cCCCCCcEEEEcCChHHHHHHHHcCCeEEEE-eCCCCcccc--cCcceEeCChhhhHHH
Q 018088 270 LDRKPSKCVVFEDDPRAITAAHNCTMMAVGL-IGAHRAYDL--VQADLAVANFNELSVI 325 (361)
Q Consensus 270 lgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V-~g~~~~~~l--~~ad~vi~sl~EL~~~ 325 (361)
+|+.|++|++|||+.+|+++|+++|+.+++| +|......+ .++|++++++.||..+
T Consensus 170 ~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~~l~el~~~ 228 (272)
T PRK13223 170 AGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVIDDLRALLPG 228 (272)
T ss_pred hCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEECCHHHHHHH
Confidence 9999999999999999999999999999998 444444333 3699999999998754
|
|
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.9e-26 Score=206.68 Aligned_cols=205 Identities=17% Similarity=0.199 Sum_probs=154.4
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHHHHHHHHHh
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLYYDN 197 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~~ 197 (361)
+++|+||+| ||+|+...+.++|.++++++|++.... .....+.|......+..+..........+.+...+.+.+...
T Consensus 4 ~~~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (221)
T PRK10563 4 IEAVFFDCDGTLVDSEVICSRAYVTMFAEFGITLSLE-EVFKRFKGVKLYEIIDIISKEHGVTLAKAELEPVYRAEVARL 82 (221)
T ss_pred CCEEEECCCCCCCCChHHHHHHHHHHHHHcCCCCCHH-HHHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHH
Confidence 789999999 999999999999999999999875433 344555666666666665432111111122222333333332
Q ss_pred cccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccc-eeEecCCCCCCC--hHHHHHHHHHcCCCC
Q 018088 198 LLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQ-AIVSEEDGMESM--AHRFLSAAVKLDRKP 274 (361)
Q Consensus 198 l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd-~iv~~e~~~~~K--P~~~~~~~~klgi~p 274 (361)
......++||+.++|+.|+ ++++|+||+....+...++.+|+..+|+ .+++++++...| |++|..+++++|++|
T Consensus 83 ~~~~~~~~~gv~~~L~~L~---~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p 159 (221)
T PRK10563 83 FDSELEPIAGANALLESIT---VPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNV 159 (221)
T ss_pred HHccCCcCCCHHHHHHHcC---CCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCCCH
Confidence 2345688999999999993 8999999999999999999999999996 678887766555 689999999999999
Q ss_pred CcEEEEcCChHHHHHHHHcCCeEEEEe-CCCCcccccCcceEeCChhhhHHHHH
Q 018088 275 SKCVVFEDDPRAITAAHNCTMMAVGLI-GAHRAYDLVQADLAVANFNELSVINL 327 (361)
Q Consensus 275 ~~~v~IGDs~~Di~aA~~aG~~~v~V~-g~~~~~~l~~ad~vi~sl~EL~~~ll 327 (361)
++|++|||++.|+++|+++|+.+|++. +.+.......++.++.++.||..++.
T Consensus 160 ~~~l~igDs~~di~aA~~aG~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 213 (221)
T PRK10563 160 ENCILVDDSSAGAQSGIAAGMEVFYFCADPHNKPIDHPLVTTFTDLAQLPELWK 213 (221)
T ss_pred HHeEEEeCcHhhHHHHHHCCCEEEEECCCCCCcchhhhhhHHHHHHHHHHHHHH
Confidence 999999999999999999999999883 33332222345667888888876544
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.5e-25 Score=199.78 Aligned_cols=195 Identities=19% Similarity=0.236 Sum_probs=154.6
Q ss_pred EEEece-eccccHHHHHHHHHHHHHHh-CCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHHHHHHHHHhcc
Q 018088 122 LIFSWD-VVADTRALKLNAWKQLAFEE-GKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLYYDNLL 199 (361)
Q Consensus 122 VIFDlD-TL~ds~~~~~~a~~~~l~~~-G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~~l~ 199 (361)
|||||| ||+|+...+.++|.++++++ |.+.... .......|......+..+ + .+........ ...+ . ..
T Consensus 1 iiFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~-~--~~~~~~~~~~---~~~~-~-~~ 71 (205)
T TIGR01454 1 VVFDLDGVLVDSFAVMREAFAIAYREVVGDGPAPF-EEYRRHLGRYFPDIMRIM-G--LPLEMEEPFV---RESY-R-LA 71 (205)
T ss_pred CeecCcCccccCHHHHHHHHHHHHHHhcCCCCCCH-HHHHHHhCccHHHHHHHc-C--CCHHHHHHHH---HHHH-H-hh
Confidence 689999 99999999999999999884 7643322 234555677666666542 2 2211111111 1112 1 23
Q ss_pred cCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcCCCCCcE
Q 018088 200 SVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDRKPSKC 277 (361)
Q Consensus 200 ~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi~p~~~ 277 (361)
....++||+.++|+.|+++|++++|+||+....+...++.+|+.++|+.++++++...+| |+.|..+++++|++|++|
T Consensus 72 ~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~ 151 (205)
T TIGR01454 72 GEVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDA 151 (205)
T ss_pred cccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCChhhe
Confidence 456889999999999999999999999999999999999999999999999998865444 679999999999999999
Q ss_pred EEEcCChHHHHHHHHcCCeEEEE-eCCCCcccc--cCcceEeCChhhhHHH
Q 018088 278 VVFEDDPRAITAAHNCTMMAVGL-IGAHRAYDL--VQADLAVANFNELSVI 325 (361)
Q Consensus 278 v~IGDs~~Di~aA~~aG~~~v~V-~g~~~~~~l--~~ad~vi~sl~EL~~~ 325 (361)
+||||+.+|+.+|+++|+.+|++ +|.+...++ .+++++++++.||..+
T Consensus 152 l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~~~~l~~~ 202 (205)
T TIGR01454 152 VMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRKPQSLLAL 202 (205)
T ss_pred EEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCCHHHHHHH
Confidence 99999999999999999999988 666555554 3699999999998765
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-25 Score=219.59 Aligned_cols=206 Identities=19% Similarity=0.256 Sum_probs=162.6
Q ss_pred CceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHHHHHHHHH
Q 018088 118 EAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLYYD 196 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~ 196 (361)
.+++||||+| ||+|+...+..+|.++++++|.+.+.. ......|......+..++..........++...+.+.+.+
T Consensus 10 ~ik~VIFDlDGTLvDt~~~~~~a~~~~~~~~G~~~~~~--~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (382)
T PLN02940 10 LVSHVILDLDGTLLNTDGIVSDVLKAFLVKYGKQWDGR--EAQKIVGKTPLEAAATVVEDYGLPCSTDEFNSEITPLLSE 87 (382)
T ss_pred cCCEEEECCcCcCCcCHHHHHHHHHHHHHHcCCCCCHH--HHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Confidence 3899999999 999999999999999999999875433 2345667766666665544321111222333333333333
Q ss_pred hcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHH-hCCCCcccceeEecCCCCCCC--hHHHHHHHHHcCCC
Q 018088 197 NLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALE-RMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDRK 273 (361)
Q Consensus 197 ~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~-~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi~ 273 (361)
.. ....++||+.++|+.|+++|++++|+||+....+...++ ..|+.++||.+++++++..+| |++|..+++++|++
T Consensus 88 ~~-~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~ 166 (382)
T PLN02940 88 QW-CNIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVE 166 (382)
T ss_pred HH-ccCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcCCCCCCHHHHHHHHHHcCCC
Confidence 32 345789999999999999999999999999999999987 789999999999999987666 57999999999999
Q ss_pred CCcEEEEcCChHHHHHHHHcCCeEEEEeC-CCCcccccCcceEeCChhhhHHHH
Q 018088 274 PSKCVVFEDDPRAITAAHNCTMMAVGLIG-AHRAYDLVQADLAVANFNELSVIN 326 (361)
Q Consensus 274 p~~~v~IGDs~~Di~aA~~aG~~~v~V~g-~~~~~~l~~ad~vi~sl~EL~~~l 326 (361)
|++|++|||+..|+++|+++|+.+|+|.. .........+++++.++.|+...-
T Consensus 167 p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~sl~el~~~~ 220 (382)
T PLN02940 167 PSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVINSLLDLQPEK 220 (382)
T ss_pred hhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEeCCHhHcCHHH
Confidence 99999999999999999999999999943 322334457999999999987543
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.6e-25 Score=195.02 Aligned_cols=178 Identities=30% Similarity=0.471 Sum_probs=148.2
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHcc---CCChHHHHHHHHHHHHHH
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLW---GKEESELDRLNSRLTQLY 194 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~---~~~~~~~~~l~~~~~~~~ 194 (361)
+++|+||+| ||+|+...+..+|.++++++|.+.+ ......+.|......+..++.. ..+...+..+...+...+
T Consensus 1 ~~~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (185)
T TIGR02009 1 YKAVIFDMDGVIVDTAPLHAQAWKHLADKYGIEFD--KQYNTSLGGLSREDILRAILKLRKPGLSLETIHQLAERKNELY 78 (185)
T ss_pred CCeEEEcCCCcccCChHHHHHHHHHHHHHcCCCCC--HHHHHHcCCCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 478999999 9999999999999999999998754 2334455666666666665543 355666666666666666
Q ss_pred HHhc-ccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcC
Q 018088 195 YDNL-LSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLD 271 (361)
Q Consensus 195 ~~~l-~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klg 271 (361)
.+.+ .....++||+.++|+.|+++|++++++||+ ..+...++.+|+.++|+.++++++....| |++|..+++++|
T Consensus 79 ~~~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~ 156 (185)
T TIGR02009 79 RELLRLTGAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADEVKEGKPHPETFLLAAELLG 156 (185)
T ss_pred HHHHhccCCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhhCCCCCCChHHHHHHHHHcC
Confidence 5554 244689999999999999999999999998 77899999999999999999998876665 579999999999
Q ss_pred CCCCcEEEEcCChHHHHHHHHcCCeEEEE
Q 018088 272 RKPSKCVVFEDDPRAITAAHNCTMMAVGL 300 (361)
Q Consensus 272 i~p~~~v~IGDs~~Di~aA~~aG~~~v~V 300 (361)
++|++|++|||+..|+++|+++|+.+|+|
T Consensus 157 ~~~~~~v~IgD~~~di~aA~~~G~~~i~v 185 (185)
T TIGR02009 157 VSPNECVVFEDALAGVQAARAAGMFAVAV 185 (185)
T ss_pred CCHHHeEEEeCcHhhHHHHHHCCCeEeeC
Confidence 99999999999999999999999999875
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-24 Score=218.69 Aligned_cols=207 Identities=16% Similarity=0.100 Sum_probs=161.8
Q ss_pred CceEEEEece-eccccHHHHHHHHHHHHHHhCC----CCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHHHHH
Q 018088 118 EAYGLIFSWD-VVADTRALKLNAWKQLAFEEGK----EIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQ 192 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~----~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~~ 192 (361)
.+++|||||| ||+|++..+..+|.+++++++. ...........+.|.+....+..+.... .....+.....+.+
T Consensus 240 m~k~vIFDlDGTLiDs~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~l~~~~-~~~~~~~~~~~~~~ 318 (459)
T PRK06698 240 MLQALIFDMDGTLFQTDKILELSLDDTFDHLRSLQLWDTVTPIDKYREIMGVPLPKVWEALLPDH-SLEIREQTDAYFLE 318 (459)
T ss_pred hhhheeEccCCceecchhHHHHHHHHHHHHHhhhcccCCCCCHHHHHHHcCCChHHHHHHHhhhc-chhHHHHHHHHHHH
Confidence 4689999999 9999999999999999999841 1111223445667888777777754321 22222223333333
Q ss_pred HHHHhc-ccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCC-CCChHHHHHHHHHc
Q 018088 193 LYYDNL-LSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGM-ESMAHRFLSAAVKL 270 (361)
Q Consensus 193 ~~~~~l-~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~-~~KP~~~~~~~~kl 270 (361)
.+.+.+ ....+++||+.++|+.|+++|++++|+||+....+...++.+|+.+||+.+++++++. .+||++|..+++++
T Consensus 319 ~~~~~~~~~~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v~~~~kP~~~~~al~~l 398 (459)
T PRK06698 319 RLIENIKSGKGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQINSLNKSDLVKSILNKY 398 (459)
T ss_pred HhHHHHhhcCCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCCCCCCCcHHHHHHHHhc
Confidence 333332 2345889999999999999999999999999999999999999999999999998874 57999999999887
Q ss_pred CCCCCcEEEEcCChHHHHHHHHcCCeEEEEe-CCCCcccccCcceEeCChhhhHHHHH
Q 018088 271 DRKPSKCVVFEDDPRAITAAHNCTMMAVGLI-GAHRAYDLVQADLAVANFNELSVINL 327 (361)
Q Consensus 271 gi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~-g~~~~~~l~~ad~vi~sl~EL~~~ll 327 (361)
+ |++|++|||+.+|+.+|+++|+.+|++. +.........+|++++++.||..++.
T Consensus 399 ~--~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~~l~el~~~l~ 454 (459)
T PRK06698 399 D--IKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVIDDLLELKGILS 454 (459)
T ss_pred C--cceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeCCHHHHHHHHH
Confidence 5 6899999999999999999999999994 43344455679999999999988653
|
|
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=7e-25 Score=193.88 Aligned_cols=180 Identities=26% Similarity=0.367 Sum_probs=142.4
Q ss_pred CceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHHHHHHHHH
Q 018088 118 EAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLYYD 196 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~ 196 (361)
++++||||+| ||+|+...+..+|.++++++|.+.+. .....+.|......+..+..........+.+...+...+..
T Consensus 4 ~~~~viFD~DGTLiDs~~~~~~a~~~~~~~~g~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (188)
T PRK10725 4 RYAGLIFDMDGTILDTEPTHRKAWREVLGRYGLQFDE--QAMVALNGSPTWRIAQAIIELNQADLDPHALAREKTEAVKS 81 (188)
T ss_pred cceEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCCCH--HHHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Confidence 3789999999 99999999999999999999986542 23455667766666665544322111112233333333444
Q ss_pred hcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcCCCC
Q 018088 197 NLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDRKP 274 (361)
Q Consensus 197 ~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi~p 274 (361)
.......++|| .++|..|++. ++++|+||+....+...++++|+..||+.+++++++...| |++|..+++++|++|
T Consensus 82 ~~~~~~~~~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~ 159 (188)
T PRK10725 82 MLLDSVEPLPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQP 159 (188)
T ss_pred HHhccCCCccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhccCCCCChHHHHHHHHHcCCCH
Confidence 43445577886 5899999876 8999999999999999999999999999999999887666 579999999999999
Q ss_pred CcEEEEcCChHHHHHHHHcCCeEEEEe
Q 018088 275 SKCVVFEDDPRAITAAHNCTMMAVGLI 301 (361)
Q Consensus 275 ~~~v~IGDs~~Di~aA~~aG~~~v~V~ 301 (361)
++||+|||+..|+++|+++|+.+|+|.
T Consensus 160 ~~~l~igDs~~di~aA~~aG~~~i~~~ 186 (188)
T PRK10725 160 TQCVVFEDADFGIQAARAAGMDAVDVR 186 (188)
T ss_pred HHeEEEeccHhhHHHHHHCCCEEEeec
Confidence 999999999999999999999999974
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.7e-24 Score=196.26 Aligned_cols=198 Identities=19% Similarity=0.259 Sum_probs=142.8
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHH---HHhCCCCCchHHHHHHHh------cC----CHHHHHHHHHccCCChHHHH
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLA---FEEGKEIPQEGDVLRQIL------NA----GADHVLHKVLLWGKEESELD 184 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l---~~~G~~~~~~~~~~~~~~------g~----~~~~~l~~~l~~~~~~~~~~ 184 (361)
+++|+||+| ||+|+...+..+|..+. .++|.+....+. ...+. +. .....+..+. .........
T Consensus 2 ~~~viFDlDGTL~ds~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 79 (221)
T TIGR02253 2 IKAIFFDLDDTLIDTSGLAEKARRNAIEVLIEAGLNVDFEEA-YEELLKLIKEYGSNYPTHFDYLIRRLW-EEYNPKLVA 79 (221)
T ss_pred ceEEEEeCCCCCcCCCCccCHHHHHHHHHHHHCCCcCCHHHH-HHHHHHHHHHhccccCcchHHHHHHHh-hhcCHHHHH
Confidence 689999999 99999988888877654 456766533322 11111 10 1111222111 111111111
Q ss_pred HHHHHHHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHH
Q 018088 185 RLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHR 262 (361)
Q Consensus 185 ~l~~~~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~ 262 (361)
.....+.........++||+.++|+.|+++|++++|+||+....+...++.+|+..+|+.++++++++..| |++
T Consensus 80 ----~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~ 155 (221)
T TIGR02253 80 ----AFVYAYHKLKFAYLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEEGVEKPHPKI 155 (221)
T ss_pred ----HHHHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccCCCCCCCHHH
Confidence 11122222222345889999999999999999999999999999999999999999999999999987666 579
Q ss_pred HHHHHHHcCCCCCcEEEEcCCh-HHHHHHHHcCCeEEEEeCCCC-c---ccccCcceEeCChhhh
Q 018088 263 FLSAAVKLDRKPSKCVVFEDDP-RAITAAHNCTMMAVGLIGAHR-A---YDLVQADLAVANFNEL 322 (361)
Q Consensus 263 ~~~~~~klgi~p~~~v~IGDs~-~Di~aA~~aG~~~v~V~g~~~-~---~~l~~ad~vi~sl~EL 322 (361)
|..+++++|++|++||+|||+. +|+.+|+++|+.+|+|..... . .....+++++.++.||
T Consensus 156 ~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~el 220 (221)
T TIGR02253 156 FYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWINQGKSSKMEDDVYPYPDYEISSLREL 220 (221)
T ss_pred HHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEECCCCCcccccccccCCCeeeCcHHhh
Confidence 9999999999999999999998 899999999999999943332 2 1123589999999886
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1e-24 Score=192.13 Aligned_cols=176 Identities=30% Similarity=0.463 Sum_probs=142.1
Q ss_pred EEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHcc---CCChHHHHHHHHHHHHHHHH
Q 018088 121 GLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLW---GKEESELDRLNSRLTQLYYD 196 (361)
Q Consensus 121 ~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~---~~~~~~~~~l~~~~~~~~~~ 196 (361)
+||||+| ||+|+...+..+|.++++++|++.+.. ....+.|.+....+..++.. ..+.....++...+...|..
T Consensus 1 ~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (185)
T TIGR01990 1 AVIFDLDGVITDTAEYHYLAWKALADELGIPFDEE--FNESLKGVSREDSLERILDLGGKKYSEEEKEELAERKNDYYVE 78 (185)
T ss_pred CeEEcCCCccccChHHHHHHHHHHHHHcCCCCCHH--HHHHhcCCChHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 5899999 999999999999999999999875432 34556666666666665432 33455555555555555544
Q ss_pred hcc--cCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcCC
Q 018088 197 NLL--SVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDR 272 (361)
Q Consensus 197 ~l~--~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi 272 (361)
... ....++||+.++|+.|+++|++++|+||+. .....++.+|+..+|+.++++++....| |++|.++++++++
T Consensus 79 ~~~~~~~~~~~pg~~~~L~~L~~~g~~~~i~s~~~--~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~ 156 (185)
T TIGR01990 79 LLKELTPADVLPGIKNLLDDLKKNNIKIALASASK--NAPTVLEKLGLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGLGV 156 (185)
T ss_pred HHHhcCCcccCccHHHHHHHHHHCCCeEEEEeCCc--cHHHHHHhcCcHhhCcEEEehhhcCCCCCChHHHHHHHHHcCC
Confidence 332 234789999999999999999999999874 3567899999999999999998876555 6799999999999
Q ss_pred CCCcEEEEcCChHHHHHHHHcCCeEEEE
Q 018088 273 KPSKCVVFEDDPRAITAAHNCTMMAVGL 300 (361)
Q Consensus 273 ~p~~~v~IGDs~~Di~aA~~aG~~~v~V 300 (361)
+|++||+|||+.+|+.+|+++||.+|+|
T Consensus 157 ~~~~~v~vgD~~~di~aA~~aG~~~i~v 184 (185)
T TIGR01990 157 SPSECIGIEDAQAGIEAIKAAGMFAVGV 184 (185)
T ss_pred CHHHeEEEecCHHHHHHHHHcCCEEEec
Confidence 9999999999999999999999999986
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-24 Score=198.03 Aligned_cols=203 Identities=15% Similarity=0.179 Sum_probs=143.7
Q ss_pred CceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHH-----HHH----
Q 018088 118 EAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELD-----RLN---- 187 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~-----~l~---- 187 (361)
++++|+||+| ||+|.. ...++.++++++|++.+... . ..+.+.+. ..+.............. .+.
T Consensus 2 ~~k~iiFDlDGTLid~~--~~~~~~~~~~~~g~~~~~~~-~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (224)
T PRK09449 2 KYDWILFDADETLFHFD--AFAGLQRMFSRYGVDFTAED-F-QDYQAVNK-PLWVDYQNGAITALQLQHTRFESWAEKLN 76 (224)
T ss_pred CccEEEEcCCCchhcch--hhHHHHHHHHHhCCCCcHHH-H-HHHHHHHH-HHHHHHHcCCCCHHHHHHHHHHHHHHHcC
Confidence 3789999999 999854 45788899999997754322 1 12111111 11111111111111110 000
Q ss_pred ---HHHHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHH
Q 018088 188 ---SRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHR 262 (361)
Q Consensus 188 ---~~~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~ 262 (361)
..+.+.+.+.......++||+.++|+.|+ +|++++|+||+....+...++.+|+..+||.+++++++...| |++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~ 155 (224)
T PRK09449 77 VTPGELNSAFLNAMAEICTPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQVGVAKPDVAI 155 (224)
T ss_pred CCHHHHHHHHHHHHhhcCccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECccCCCCCCHHH
Confidence 11223333333334578999999999999 579999999999999999999999999999999999886666 579
Q ss_pred HHHHHHHcCCC-CCcEEEEcCCh-HHHHHHHHcCCeEEEEe-CCCCcccccCcceEeCChhhhHHHH
Q 018088 263 FLSAAVKLDRK-PSKCVVFEDDP-RAITAAHNCTMMAVGLI-GAHRAYDLVQADLAVANFNELSVIN 326 (361)
Q Consensus 263 ~~~~~~klgi~-p~~~v~IGDs~-~Di~aA~~aG~~~v~V~-g~~~~~~l~~ad~vi~sl~EL~~~l 326 (361)
|..+++++|+. +++|++|||+. +|+.+|+++|+.+|++. +.........+|+++.++.||..++
T Consensus 156 ~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~~~~el~~~l 222 (224)
T PRK09449 156 FDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVSSLSELEQLL 222 (224)
T ss_pred HHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEECCHHHHHHHH
Confidence 99999999985 47999999998 69999999999999984 2222222236899999999998764
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=99.93 E-value=4e-24 Score=193.88 Aligned_cols=203 Identities=18% Similarity=0.191 Sum_probs=149.7
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHH-----HHHH-----
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESEL-----DRLN----- 187 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~-----~~l~----- 187 (361)
+++|+||+| ||+|+...+..++.++++++|++..... .....+.. ...+..+.......... ..+.
T Consensus 1 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (224)
T TIGR02254 1 YKTLLFDLDDTILDFQAAEALALRLLFEDQGIPLTEDM--FAQYKEIN-QGLWRAYEEGKITKDEVVNTRFSALLKEYNT 77 (224)
T ss_pred CCEEEEcCcCcccccchHHHHHHHHHHHHhCCCccHHH--HHHHHHHh-HHHHHHHHcCCCCHHHHHHHHHHHHHHHhCC
Confidence 478999999 9999999999999999999997653221 11111111 11111111111111110 0000
Q ss_pred ----HHHHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hH
Q 018088 188 ----SRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AH 261 (361)
Q Consensus 188 ----~~~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~ 261 (361)
..+...+.........++||+.++|+.|+++ ++++|+||+....+...++.+|+..+||.++++++....| |+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~~~ 156 (224)
T TIGR02254 78 EADEALLNQKYLRFLEEGHQLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDAGIQKPDKE 156 (224)
T ss_pred CCcHHHHHHHHHHHHhccCeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCccCCCCCCHH
Confidence 1233333333333457899999999999999 9999999999999999999999999999999998877655 57
Q ss_pred HHHHHHHHc-CCCCCcEEEEcCCh-HHHHHHHHcCCeEEEEe-CCCCcccccCcceEeCChhhhHHH
Q 018088 262 RFLSAAVKL-DRKPSKCVVFEDDP-RAITAAHNCTMMAVGLI-GAHRAYDLVQADLAVANFNELSVI 325 (361)
Q Consensus 262 ~~~~~~~kl-gi~p~~~v~IGDs~-~Di~aA~~aG~~~v~V~-g~~~~~~l~~ad~vi~sl~EL~~~ 325 (361)
+|..+++++ |++|++||+|||+. +|+.+|+++|+.+|++. +.........+++++.++.||..+
T Consensus 157 ~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~el~~~ 223 (224)
T TIGR02254 157 IFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIRSLEELYEI 223 (224)
T ss_pred HHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEECCHHHHHhh
Confidence 999999999 99999999999998 79999999999999983 333333335689999999998865
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.8e-23 Score=190.59 Aligned_cols=125 Identities=12% Similarity=0.129 Sum_probs=103.5
Q ss_pred cCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcCCCCCcE
Q 018088 200 SVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDRKPSKC 277 (361)
Q Consensus 200 ~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi~p~~~ 277 (361)
....++||+.++|+.|+++|++++|+||+.+..+...++.+|+..+|+.++++++...+| |++|..+++++|++|++|
T Consensus 90 ~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~~ 169 (224)
T PRK14988 90 PRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAERT 169 (224)
T ss_pred ccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHHE
Confidence 456889999999999999999999999999999999999999999999999999877666 579999999999999999
Q ss_pred EEEcCChHHHHHHHHcCCeE-EEEeCCCCcccccCcceEeCChhhhHHH
Q 018088 278 VVFEDDPRAITAAHNCTMMA-VGLIGAHRAYDLVQADLAVANFNELSVI 325 (361)
Q Consensus 278 v~IGDs~~Di~aA~~aG~~~-v~V~g~~~~~~l~~ad~vi~sl~EL~~~ 325 (361)
++|||+..|+++|+++||.+ ++|..+..... ..+.....+++++..+
T Consensus 170 l~igDs~~di~aA~~aG~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~~ 217 (224)
T PRK14988 170 LFIDDSEPILDAAAQFGIRYCLGVTNPDSGIA-EKQYQRHPSLNDYRRL 217 (224)
T ss_pred EEEcCCHHHHHHHHHcCCeEEEEEeCCCCCcc-chhccCCCcHHHHHHH
Confidence 99999999999999999984 67754332222 2333334455544443
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.91 E-value=8e-23 Score=221.93 Aligned_cols=224 Identities=23% Similarity=0.242 Sum_probs=168.6
Q ss_pred CceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHcc----CCChHH-HHHHHHHHH
Q 018088 118 EAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLW----GKEESE-LDRLNSRLT 191 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~----~~~~~~-~~~l~~~~~ 191 (361)
++++|||||| ||+|++..+.++|.++++++|++.+.. ......|.+...++..+... ..+... .+.+...+.
T Consensus 74 ~ikaVIFDlDGTLiDS~~~~~~a~~~~~~~~G~~it~e--~~~~~~G~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 151 (1057)
T PLN02919 74 KVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVE--DFVPFMGTGEANFLGGVASVKGVKGFDPDAAKKRFFEIYL 151 (1057)
T ss_pred CCCEEEECCCCCeEeChHHHHHHHHHHHHHcCCCCCHH--HHHHHhCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHH
Confidence 4789999999 999999999999999999999875433 23455676666665554322 112221 122222222
Q ss_pred HHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCC-cccceeEecCCCCCCC--hHHHHHHHH
Q 018088 192 QLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLL-KYFQAIVSEEDGMESM--AHRFLSAAV 268 (361)
Q Consensus 192 ~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~-~~Fd~iv~~e~~~~~K--P~~~~~~~~ 268 (361)
+.|... ....++||+.++|+.|+++|++++|+||.....+...++.+|+. .+|+.+++++++...| |++|+.+++
T Consensus 152 ~~~~~~--~~~~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~ 229 (1057)
T PLN02919 152 EKYAKP--NSGIGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAK 229 (1057)
T ss_pred HHhhhc--ccCccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECcccccCCCCHHHHHHHHH
Confidence 222211 12357999999999999999999999999999999999999996 7899999999887655 689999999
Q ss_pred HcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccc--cCcceEeCChhhhHHHHH-HhhH-hcCCCChhhHHhh
Q 018088 269 KLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDL--VQADLAVANFNELSVINL-RRLF-ANKGSTFMERQKQ 344 (361)
Q Consensus 269 klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l--~~ad~vi~sl~EL~~~ll-~~l~-~~~~~~~~~l~~~ 344 (361)
++|+.|++||+|||+..|+++|+++||.+|+|.......++ .+++++++++.|+....+ .... +....+.||--+.
T Consensus 230 ~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~~~~~~~~~~~~~~~~~~~~~~~~ 309 (1057)
T PLN02919 230 ILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNISLSDILTGGSDATPNVTGMDWINT 309 (1057)
T ss_pred HcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCCHHHHHhcCCCCCCCccchhhhcc
Confidence 99999999999999999999999999999999554444444 368999999999864433 2222 3335677775443
Q ss_pred h
Q 018088 345 I 345 (361)
Q Consensus 345 ~ 345 (361)
+
T Consensus 310 ~ 310 (1057)
T PLN02919 310 I 310 (1057)
T ss_pred c
Confidence 3
|
|
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.7e-23 Score=190.23 Aligned_cols=201 Identities=15% Similarity=0.164 Sum_probs=136.8
Q ss_pred CceEEEEece-eccccHHHHHHHHHHHHHHhCCCCC----c-hH---HHHHHHhcC------CHH----HHHHHHH-ccC
Q 018088 118 EAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIP----Q-EG---DVLRQILNA------GAD----HVLHKVL-LWG 177 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~----~-~~---~~~~~~~g~------~~~----~~l~~~l-~~~ 177 (361)
++++|+||+| ||+|+...+..+++++++..+...+ . .. .+...+... ... ..+..++ ..+
T Consensus 9 ~~k~iiFDlDGTL~D~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 88 (238)
T PRK10748 9 RISALTFDLDDTLYDNRPVILRTEQEALAFVQNYHPALRSFQNEDLQRLRQALREAEPEIYHDVTRWRWRAIEQAMLDAG 88 (238)
T ss_pred CceeEEEcCcccccCChHHHHHHHHHHHHHHHHhCcchhhCCHHHHHHHHHHHHHhCchhhCcHHHHHHHHHHHHHHHcC
Confidence 4799999999 9999999999999988766532111 0 00 011100000 000 1111111 112
Q ss_pred CChHHHHHHHHHHHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCC
Q 018088 178 KEESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGME 257 (361)
Q Consensus 178 ~~~~~~~~l~~~~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~ 257 (361)
.+..............+.. ......++||+.++|+.|++. ++++++||+... ++..|+.++|+.++++++...
T Consensus 89 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~fd~i~~~~~~~~ 161 (238)
T PRK10748 89 LSAEEASAGADAAMINFAK-WRSRIDVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYFEFVLRAGPHGR 161 (238)
T ss_pred CCHHHHHHHHHHHHHHHHH-HhhcCCCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhhceeEecccCCc
Confidence 2222221112222222222 113357899999999999976 999999998754 478899999999999988766
Q ss_pred CC--hHHHHHHHHHcCCCCCcEEEEcCC-hHHHHHHHHcCCeEEEEeCCCCc-----ccccCcceEeCChhhhHHH
Q 018088 258 SM--AHRFLSAAVKLDRKPSKCVVFEDD-PRAITAAHNCTMMAVGLIGAHRA-----YDLVQADLAVANFNELSVI 325 (361)
Q Consensus 258 ~K--P~~~~~~~~klgi~p~~~v~IGDs-~~Di~aA~~aG~~~v~V~g~~~~-----~~l~~ad~vi~sl~EL~~~ 325 (361)
.| |++|..+++++|++|++|+||||+ ..|+.+|+++|+.+|||...... .....++++|.++.||..+
T Consensus 162 ~KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~p~~~i~~l~el~~~ 237 (238)
T PRK10748 162 SKPFSDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACWINPENGDLMQTWDSRLLPHIEISRLASLTSL 237 (238)
T ss_pred CCCcHHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEEEcCCCccccccccccCCCCEEECCHHHHHhh
Confidence 55 579999999999999999999999 58999999999999999543221 1123589999999999875
|
|
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.7e-23 Score=182.53 Aligned_cols=177 Identities=15% Similarity=0.174 Sum_probs=130.5
Q ss_pred eEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHH---HHHH-------------hcCCHHH----HHHHHHcc-C
Q 018088 120 YGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDV---LRQI-------------LNAGADH----VLHKVLLW-G 177 (361)
Q Consensus 120 k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~---~~~~-------------~g~~~~~----~l~~~l~~-~ 177 (361)
++|+||+| ||+|+...+..++.++++++|++.+..+.. ...+ .|....+ .+...+.. +
T Consensus 1 k~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 80 (203)
T TIGR02252 1 KLITFDAVGTLLALKEPVGEVYCEIARKYGVEVSPDELEQAFRRAFKAMSEAFPNFGFSSGLTPQQWWQKLVRDTFGRAG 80 (203)
T ss_pred CeEEEecCCceeeeCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHHHHhcC
Confidence 57999999 999999999999999999999876543211 0111 0223222 22222221 1
Q ss_pred -CChHHHHHHHHHHHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCC
Q 018088 178 -KEESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGM 256 (361)
Q Consensus 178 -~~~~~~~~l~~~~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~ 256 (361)
............+...+.. .....++||+.++|+.|+++|++++|+||+... +...++.+|+..+|+.++++++..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~s~~~~ 157 (203)
T TIGR02252 81 VPDPESFEKIFEELYSYFAT--PEPWQVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTSYEVG 157 (203)
T ss_pred CCCchhHHHHHHHHHHHhcC--CCcceeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEeecccC
Confidence 1222233333333222211 123468999999999999999999999998765 578899999999999999999887
Q ss_pred CCC--hHHHHHHHHHcCCCCCcEEEEcCCh-HHHHHHHHcCCeEEE
Q 018088 257 ESM--AHRFLSAAVKLDRKPSKCVVFEDDP-RAITAAHNCTMMAVG 299 (361)
Q Consensus 257 ~~K--P~~~~~~~~klgi~p~~~v~IGDs~-~Di~aA~~aG~~~v~ 299 (361)
..| |++|.++++++|++|++|++|||+. +|+.+|+++|+.+|+
T Consensus 158 ~~KP~~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~~i~ 203 (203)
T TIGR02252 158 AEKPDPKIFQEALERAGISPEEALHIGDSLRNDYQGARAAGWRALL 203 (203)
T ss_pred CCCCCHHHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCeeeC
Confidence 666 4689999999999999999999997 799999999999875
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-22 Score=184.18 Aligned_cols=194 Identities=18% Similarity=0.239 Sum_probs=146.7
Q ss_pred ce-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHcc-CC----ChHHHHHHHHHHHHHHHHhcc
Q 018088 126 WD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLW-GK----EESELDRLNSRLTQLYYDNLL 199 (361)
Q Consensus 126 lD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~-~~----~~~~~~~l~~~~~~~~~~~l~ 199 (361)
|| ||+|++..+..+|.++++++|++.+. .....+.|......+..+... +. ..+.+.. .....+... .
T Consensus 1 ~DGTL~Ds~~~~~~a~~~~~~~~g~~~~~--~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~ 74 (220)
T PLN02811 1 MDGLLLDTEKFYTEVQEKILARYGKTFDW--SLKAKMMGKKAIEAARIFVEESGLSDSLSPEDFLV---EREAMLQDL-F 74 (220)
T ss_pred CCCcceecHHHHHHHHHHHHHHcCCCCCH--HHHHHccCCCHHHHHHHHHHHhCCCCCCCHHHHHH---HHHHHHHHH-H
Confidence 79 99999999999999999999987432 244556777766665554432 22 1222222 222222222 2
Q ss_pred cCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHH-HHhCCCCcccceeEecC--CCCCCC--hHHHHHHHHHcC---
Q 018088 200 SVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEA-LERMGLLKYFQAIVSEE--DGMESM--AHRFLSAAVKLD--- 271 (361)
Q Consensus 200 ~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~-L~~lgl~~~Fd~iv~~e--~~~~~K--P~~~~~~~~klg--- 271 (361)
....++||+.++|+.|+++|++++|+||+.+..+... ++..++..+|+.+++++ ++...| |++|..++++++
T Consensus 75 ~~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~ 154 (220)
T PLN02811 75 PTSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGP 154 (220)
T ss_pred hhCCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCC
Confidence 3457899999999999999999999999987655543 33457889999999999 665555 679999999997
Q ss_pred CCCCcEEEEcCChHHHHHHHHcCCeEEEE-eCCCCcccccCcceEeCChhhhHHH
Q 018088 272 RKPSKCVVFEDDPRAITAAHNCTMMAVGL-IGAHRAYDLVQADLAVANFNELSVI 325 (361)
Q Consensus 272 i~p~~~v~IGDs~~Di~aA~~aG~~~v~V-~g~~~~~~l~~ad~vi~sl~EL~~~ 325 (361)
+.|++|+||||+..|+++|+++|+.+|+| ++........++|+++.++.|+...
T Consensus 155 ~~~~~~v~IgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vi~~~~e~~~~ 209 (220)
T PLN02811 155 VDPGKVLVFEDAPSGVEAAKNAGMSVVMVPDPRLDKSYCKGADQVLSSLLDFKPE 209 (220)
T ss_pred CCccceEEEeccHhhHHHHHHCCCeEEEEeCCCCcHhhhhchhhHhcCHhhCCHH
Confidence 99999999999999999999999999999 4443434455789999999987643
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.7e-22 Score=180.41 Aligned_cols=103 Identities=15% Similarity=0.148 Sum_probs=96.3
Q ss_pred CCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcCCCCCcEE
Q 018088 201 VTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDRKPSKCV 278 (361)
Q Consensus 201 ~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi~p~~~v 278 (361)
...++||+.++|+.|+++|++++++||+....+...++.+|+..+||.++++++++..| |++|..+++++|+.|++|+
T Consensus 90 ~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~ 169 (198)
T TIGR01428 90 RLPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEVL 169 (198)
T ss_pred cCCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhEE
Confidence 34789999999999999999999999999999999999999999999999999987766 5799999999999999999
Q ss_pred EEcCChHHHHHHHHcCCeEEEEeCC
Q 018088 279 VFEDDPRAITAAHNCTMMAVGLIGA 303 (361)
Q Consensus 279 ~IGDs~~Di~aA~~aG~~~v~V~g~ 303 (361)
+|||+.+|+.+|+++||.+|+|...
T Consensus 170 ~vgD~~~Di~~A~~~G~~~i~v~r~ 194 (198)
T TIGR01428 170 FVASNPWDLGGAKKFGFKTAWVNRP 194 (198)
T ss_pred EEeCCHHHHHHHHHCCCcEEEecCC
Confidence 9999999999999999999999543
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.9e-22 Score=174.34 Aligned_cols=172 Identities=26% Similarity=0.400 Sum_probs=134.4
Q ss_pred EEEece-eccccHHHHHHHHHH-HHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHHHHHHHHHhcc
Q 018088 122 LIFSWD-VVADTRALKLNAWKQ-LAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLYYDNLL 199 (361)
Q Consensus 122 VIFDlD-TL~ds~~~~~~a~~~-~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~~l~ 199 (361)
|+||+| ||+++...+.++|.. +++.+|.+. .....+...+......+..++..... ........+.+. ...
T Consensus 1 iifD~dgtL~d~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~---~~~ 73 (176)
T PF13419_consen 1 IIFDLDGTLVDTDPAIFRALQRLALEEFGLEI--SAEELRELFGKSYEEALERLLERFGI--DPEEIQELFREY---NLE 73 (176)
T ss_dssp EEEESBTTTEEHHHHHHHHHHHHHHHHTTHHH--HHHHHHHHTTSHHHHHHHHHHHHHHH--HHHHHHHHHHHH---HHH
T ss_pred cEEECCCCcEeCHHHHHHHHHHHHHHHhCCCC--CHHHHHHHhCCCHHHHHHHhhhccch--hHHHHHHHhhhh---hhh
Confidence 799999 999999988888887 477777652 22233444455555555554432211 111122222221 112
Q ss_pred cCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCCh--HHHHHHHHHcCCCCCcE
Q 018088 200 SVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMA--HRFLSAAVKLDRKPSKC 277 (361)
Q Consensus 200 ~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP--~~~~~~~~klgi~p~~~ 277 (361)
...+++||+.++|+.|+++|++++++||++...+...++++|+.++|+.++++++.+..|| +.|..+++++|++|++|
T Consensus 74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~~ 153 (176)
T PF13419_consen 74 SKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEEI 153 (176)
T ss_dssp GGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGGE
T ss_pred hccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhhhhhhHHHHHHHHHHHcCCCcceE
Confidence 4458899999999999999999999999999999999999999999999999998877775 79999999999999999
Q ss_pred EEEcCChHHHHHHHHcCCeEEEE
Q 018088 278 VVFEDDPRAITAAHNCTMMAVGL 300 (361)
Q Consensus 278 v~IGDs~~Di~aA~~aG~~~v~V 300 (361)
++|||+..|+.+|+++|+.+|+|
T Consensus 154 ~~vgD~~~d~~~A~~~G~~~i~v 176 (176)
T PF13419_consen 154 LFVGDSPSDVEAAKEAGIKTIWV 176 (176)
T ss_dssp EEEESSHHHHHHHHHTTSEEEEE
T ss_pred EEEeCCHHHHHHHHHcCCeEEeC
Confidence 99999999999999999999986
|
... |
| >KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.7e-21 Score=173.09 Aligned_cols=202 Identities=21% Similarity=0.315 Sum_probs=163.2
Q ss_pred CceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHHHHHHHHH
Q 018088 118 EAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLYYD 196 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~ 196 (361)
.+.+++|||| ||+|++..+.++|.+++.++|.+.+.+ ...++.|....+....+..+..+.-..++...+..+....
T Consensus 9 ~~~~~lfD~dG~lvdte~~y~~~~~~~~~~ygk~~~~~--~~~~~mG~~~~eaa~~~~~~~~dp~s~ee~~~e~~~~~~~ 86 (222)
T KOG2914|consen 9 KVSACLFDMDGTLVDTEDLYTEAWQELLDRYGKPYPWD--VKVKSMGKRTSEAARLFVKKLPDPVSREEFNKEEEEILDR 86 (222)
T ss_pred ceeeEEEecCCcEEecHHHHHHHHHHHHHHcCCCChHH--HHHHHcCCCHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHH
Confidence 3679999999 999999999999999999999855544 5567889998888888775554555555555555554444
Q ss_pred hcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCC-CCcccceeEe--cCCCCCCC--hHHHHHHHHHcC
Q 018088 197 NLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMG-LLKYFQAIVS--EEDGMESM--AHRFLSAAVKLD 271 (361)
Q Consensus 197 ~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lg-l~~~Fd~iv~--~e~~~~~K--P~~~~~~~~klg 271 (361)
.+ ....++||+..+++.|+.+|++++++|+..+......+++++ +...|+.++. +.++..+| |++|+.+++.+|
T Consensus 87 ~~-~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~ 165 (222)
T KOG2914|consen 87 LF-MNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFSHVVLGDDPEVKNGKPDPDIYLKAAKRLG 165 (222)
T ss_pred hc-cccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcCCCeecCCccccCCCCCchHHHHHHHhcC
Confidence 43 456889999999999999999999999999999999999996 8888988887 55566666 679999999999
Q ss_pred CCC-CcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcc-cccCcceEeCChhhh
Q 018088 272 RKP-SKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAY-DLVQADLAVANFNEL 322 (361)
Q Consensus 272 i~p-~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~-~l~~ad~vi~sl~EL 322 (361)
..| ++|++|+|++.++.+|++|||.+|+|....-.. ...+++.++.++.+.
T Consensus 166 ~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~~~~~~~~~~~~~~~~~~~~~~ 218 (222)
T KOG2914|consen 166 VPPPSKCLVFEDSPVGVQAAKAAGMQVVGVATPDLSNLFSAGATLILESLEDF 218 (222)
T ss_pred CCCccceEEECCCHHHHHHHHhcCCeEEEecCCCcchhhhhccceeccccccc
Confidence 998 999999999999999999999999996522221 123577777776654
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=99.88 E-value=4e-21 Score=171.51 Aligned_cols=172 Identities=19% Similarity=0.164 Sum_probs=127.9
Q ss_pred EEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCH--------HHHHHHHHccCC-----ChHHHHHH
Q 018088 121 GLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGA--------DHVLHKVLLWGK-----EESELDRL 186 (361)
Q Consensus 121 ~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~--------~~~l~~~l~~~~-----~~~~~~~l 186 (361)
+|||||| ||+|++..+..+|.++++++|......+ ....+.|.+. ...+...+.... .....+.+
T Consensus 2 ~viFD~DGTLiDs~~~~~~a~~~~~~~~g~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
T TIGR01548 2 ALVLDMDGVMADVSQSYRRAIIDTVEHFGGVSVTHA-DIDHTKLAGNANNDWQLTHRLVVDGLNSASSERVRDAPTLEAV 80 (197)
T ss_pred ceEEecCceEEechHHHHHHHHHHHHHHcCCCCCHH-HHHHHHHccCccCchHHHHHHHHHhhhcccchhccCCccHHHH
Confidence 6999999 9999999999999999999984332222 2334444321 122222232111 22233444
Q ss_pred HHHHHHHHHHhccc---------CCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCC
Q 018088 187 NSRLTQLYYDNLLS---------VTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGME 257 (361)
Q Consensus 187 ~~~~~~~~~~~l~~---------~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~ 257 (361)
...+.+.|...... ...+.+++.++|+.|++.|++++|+||+....+...++.+|+..+|+.+++++++..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~ 160 (197)
T TIGR01548 81 TAQFQALYQGVGYYRDLATLGLIEDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMEDCPP 160 (197)
T ss_pred HHHHHHHHcCCcccccccchhhhccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeecCCCC
Confidence 44455544432111 124566779999999999999999999999999999999999999999999988654
Q ss_pred -CChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHc
Q 018088 258 -SMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNC 293 (361)
Q Consensus 258 -~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~a 293 (361)
++|+.|..+++++|++|++|++|||+.+|+.+|+++
T Consensus 161 KP~p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 161 KPNPEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred CcCHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 446899999999999999999999999999999975
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=99.87 E-value=2e-21 Score=175.17 Aligned_cols=180 Identities=13% Similarity=0.099 Sum_probs=124.6
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHH-H------
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSR-L------ 190 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~-~------ 190 (361)
+++|||||| ||+|+.. ...+|...+...|++ .......+.+.........+.....+..++.....+ +
T Consensus 2 ik~viFDldGtL~d~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 77 (211)
T TIGR02247 2 IKAVIFDFGGVLLPSPG-VMRRWETERGLPGLK---DFIVTVNITGPDFNPWARTFERGELTAEAFDGLFRHEYGLRLGH 77 (211)
T ss_pred ceEEEEecCCceecCHH-HHHHHHHHcCCCCCc---cHHHHHHhcCCCCChHHHHHHcCCCCHHHHHHHHHHHhccccCC
Confidence 579999999 9999976 667777665555543 222233444544333333221111222222211111 1
Q ss_pred ----HHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHH--HHHHHHhCCCCcccceeEecCCCCCCC--hHH
Q 018088 191 ----TQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRK--MVEALERMGLLKYFQAIVSEEDGMESM--AHR 262 (361)
Q Consensus 191 ----~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~--~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~ 262 (361)
...+.........++||+.++|+.|+++|++++|+||+.... ....+...++..+||.++++++....| |++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~ 157 (211)
T TIGR02247 78 DVRIAPVFPLLYGENTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCLEGLRKPDPRI 157 (211)
T ss_pred CcCchhhHHHHhccccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeeecCCCCCCHHH
Confidence 011111112245789999999999999999999999986543 333445568889999999998876666 579
Q ss_pred HHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeC
Q 018088 263 FLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIG 302 (361)
Q Consensus 263 ~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g 302 (361)
|..+++++|+.|++|+||||+..|+.+|+++|+.+|++.+
T Consensus 158 ~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~i~v~~ 197 (211)
T TIGR02247 158 YQLMLERLGVAPEECVFLDDLGSNLKPAAALGITTIKVSD 197 (211)
T ss_pred HHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEEEEECC
Confidence 9999999999999999999999999999999999999843
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.9e-21 Score=171.66 Aligned_cols=167 Identities=16% Similarity=0.145 Sum_probs=123.2
Q ss_pred EEEEece-eccccHHHHHHHHHHHHH-----HhCCCCCchHHHHH---HHhcCCHHHHHHHHHccCCChHHHHHHHHHHH
Q 018088 121 GLIFSWD-VVADTRALKLNAWKQLAF-----EEGKEIPQEGDVLR---QILNAGADHVLHKVLLWGKEESELDRLNSRLT 191 (361)
Q Consensus 121 ~VIFDlD-TL~ds~~~~~~a~~~~l~-----~~G~~~~~~~~~~~---~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~ 191 (361)
+|||||| ||+|+...+..+|.+.+. ++|++......+.. ...|......... ....... +.
T Consensus 2 ~viFDlDGTL~ds~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~g~~~~~~~~~---~~~~~~~-------~~ 71 (184)
T TIGR01993 2 VWFFDLDNTLYPHSAGIFLQIDRNITEFVAARLKLSEEEARVLRKDYYREYGTTLAGLMIL---HEIDADE-------YL 71 (184)
T ss_pred eEEEeCCCCCCCCcccHHHHHHHHHHHHHHHHcCcCHHHHHHHHHHHHHHHchHHHHHHHh---hCCCHHH-------HH
Confidence 7999999 999999888888887654 45654432221211 1123323332222 1222221 22
Q ss_pred HHHHHhc-ccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCC------CChHHHH
Q 018088 192 QLYYDNL-LSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGME------SMAHRFL 264 (361)
Q Consensus 192 ~~~~~~l-~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~------~KP~~~~ 264 (361)
..+.+.. .....++||+.++|+.|+ .+++|+||+....+...++.+|+.++||.++++++... ++|++|.
T Consensus 72 ~~~~~~~~~~~~~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~ 148 (184)
T TIGR01993 72 RYVHGRLPYEKLKPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDTANPDYLLPKPSPQAYE 148 (184)
T ss_pred HHHhccCCHHhCCCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeecccCccCCCCCCHHHHH
Confidence 2222211 123478999999999998 58999999999999999999999999999999988653 4568999
Q ss_pred HHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEE
Q 018088 265 SAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGL 300 (361)
Q Consensus 265 ~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V 300 (361)
.+++++|+.|++|++|||+..|+.+|+++|+.+|+|
T Consensus 149 ~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~i~v 184 (184)
T TIGR01993 149 KALREAGVDPERAIFFDDSARNIAAAKALGMKTVLV 184 (184)
T ss_pred HHHHHhCCCccceEEEeCCHHHHHHHHHcCCEEeeC
Confidence 999999999999999999999999999999999875
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.8e-21 Score=172.38 Aligned_cols=187 Identities=11% Similarity=0.157 Sum_probs=133.7
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHHHHHHHHHh
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLYYDN 197 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~~ 197 (361)
+++||||+| ||+|+. .++.++++++|++. + ... ...+.+....+...++ .+.....++...+.. ..
T Consensus 2 ~k~viFDlDGTLiD~~----~~~~~~~~~~g~~~--~-~~~-~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~---~~ 68 (197)
T PHA02597 2 KPTILTDVDGVLLSWQ----SGLPYFAQKYNIPT--D-HIL-KMIQDERFRDPGELFG--CDQELAKKLIEKYNN---SD 68 (197)
T ss_pred CcEEEEecCCceEchh----hccHHHHHhcCCCH--H-HHH-HHHhHhhhcCHHHHhc--ccHHHHHHHhhhhhH---HH
Confidence 589999999 999944 56788888898753 2 222 2233332222333333 233333343333332 22
Q ss_pred cccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCc----ccceeEecCCCCCCChHHHHHHHHHcCCC
Q 018088 198 LLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLK----YFQAIVSEEDGMESMAHRFLSAAVKLDRK 273 (361)
Q Consensus 198 l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~----~Fd~iv~~e~~~~~KP~~~~~~~~klgi~ 273 (361)
......++||+.++|+.|++. ++++++||.........++.+++.. +|+.++++++. .+||++|..+++++|
T Consensus 69 ~~~~~~~~pG~~e~L~~L~~~-~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~-~~kp~~~~~a~~~~~-- 144 (197)
T PHA02597 69 FIRYLSAYDDALDVINKLKED-YDFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGHD-ESKEKLFIKAKEKYG-- 144 (197)
T ss_pred HHHhccCCCCHHHHHHHHHhc-CCEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEeccC-cccHHHHHHHHHHhC--
Confidence 233457899999999999987 5788889987777666777777765 45777777764 568999999999999
Q ss_pred CCcEEEEcCChHHHHHHHHc--CCeEEEEeCCCCcccccCcceEeCChhhhH
Q 018088 274 PSKCVVFEDDPRAITAAHNC--TMMAVGLIGAHRAYDLVQADLAVANFNELS 323 (361)
Q Consensus 274 p~~~v~IGDs~~Di~aA~~a--G~~~v~V~g~~~~~~l~~ad~vi~sl~EL~ 323 (361)
|++|+||||+..|+.+|++| |+.+|++..... .....+++.|.++.|+.
T Consensus 145 ~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~~-~~~~~~~~~~~~~~~~~ 195 (197)
T PHA02597 145 DRVVCFVDDLAHNLDAAHEALSQLPVIHMLRGER-DHIPKLAHRVKSWNDIE 195 (197)
T ss_pred CCcEEEeCCCHHHHHHHHHHHcCCcEEEecchhh-ccccchhhhhccHHHHh
Confidence 89999999999999999999 999999943333 33345779999999975
|
2 hypothetical protein; Provisional |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.4e-20 Score=165.06 Aligned_cols=98 Identities=24% Similarity=0.407 Sum_probs=90.4
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcCCCCCcEEE
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDRKPSKCVV 279 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi~p~~~v~ 279 (361)
..++||+.++|+.|+++|++++++||+.... ...+.++|+..+|+.++++++...+| |+.|..+++++|++|++|++
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~ 162 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECLF 162 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEEE
Confidence 5889999999999999999999999999888 66666799999999999998877777 57999999999999999999
Q ss_pred EcCChHHHHHHHHcCCeEEEE
Q 018088 280 FEDDPRAITAAHNCTMMAVGL 300 (361)
Q Consensus 280 IGDs~~Di~aA~~aG~~~v~V 300 (361)
|||+..|+.+|+++|+.+|+|
T Consensus 163 vgD~~~di~aA~~~G~~~i~v 183 (183)
T TIGR01509 163 VDDSPAGIEAAKAAGMHTVLV 183 (183)
T ss_pred EcCCHHHHHHHHHcCCEEEeC
Confidence 999999999999999999875
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.6e-21 Score=175.35 Aligned_cols=189 Identities=13% Similarity=0.100 Sum_probs=130.5
Q ss_pred CceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcC-CHHHHHHHHHc-cCCChHHHHHHHHHHHHHH
Q 018088 118 EAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNA-GADHVLHKVLL-WGKEESELDRLNSRLTQLY 194 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~-~~~~~l~~~l~-~~~~~~~~~~l~~~~~~~~ 194 (361)
++++++||+| ||++++ .|.++++.+|.+............|. .....+...+. +..... +.+
T Consensus 13 ~~k~iiFD~DGTL~~~~-----~~~~l~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~----------~~~ 77 (219)
T TIGR00338 13 SKKLVVFDMDSTLINAE-----TIDEIAKIAGVEEEVSEITERAMRGELDFKASLRERVALLKGLPV----------ELL 77 (219)
T ss_pred cCCEEEEeCcccCCCch-----HHHHHHHHhCCHHHHHHHHHHHHcCCCCHHHHHHHHHHHhCCCCH----------HHH
Confidence 4689999999 999986 67788888886533222222222221 22222222111 111111 011
Q ss_pred HHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeE-------ecC----CC-CCCChHH
Q 018088 195 YDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIV-------SEE----DG-MESMAHR 262 (361)
Q Consensus 195 ~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv-------~~e----~~-~~~KP~~ 262 (361)
.......+++||+.++|+.|+++|++++|+||+....+...++.+|+..+|+..+ ++. .. ..+||+.
T Consensus 78 -~~~~~~~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 156 (219)
T TIGR00338 78 -KEVRENLPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLTGLVEGPIVDASYKGKT 156 (219)
T ss_pred -HHHHhcCCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEEEEEecCcccCCcccHHH
Confidence 1111234789999999999999999999999999999999999999998885432 221 11 2348999
Q ss_pred HHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeC--ChhhhHHH
Q 018088 263 FLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVA--NFNELSVI 325 (361)
Q Consensus 263 ~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~--sl~EL~~~ 325 (361)
|..++++++++|++|++|||+.+|+.+|+++|+.+++ .+ .......|++++. ++.++..+
T Consensus 157 ~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~-~~--~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 157 LLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAF-NA--KPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred HHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEe-CC--CHHHHHhchhccCCCCHHHHHhh
Confidence 9999999999999999999999999999999998543 22 2222346889987 55666654
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.5e-20 Score=169.47 Aligned_cols=126 Identities=21% Similarity=0.217 Sum_probs=111.9
Q ss_pred CCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCCh--HHHHHHHHHcCCCCCcEE
Q 018088 201 VTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMA--HRFLSAAVKLDRKPSKCV 278 (361)
Q Consensus 201 ~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP--~~~~~~~~klgi~p~~~v 278 (361)
..+++|++.+.|+.++.. ++++++||+....+...++++|+.++||.++++++.+..|| ++|..+++++|++|++|+
T Consensus 97 ~~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~l 175 (229)
T COG1011 97 LLPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEAL 175 (229)
T ss_pred hCccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhhheEEEecccccCCCCcHHHHHHHHHcCCCcceEE
Confidence 358899999999999999 99999999999999999999999999999999999998886 599999999999999999
Q ss_pred EEcCChH-HHHHHHHcCCeEEEEeCCCC--cccccCcceEeCChhhhHHHHH
Q 018088 279 VFEDDPR-AITAAHNCTMMAVGLIGAHR--AYDLVQADLAVANFNELSVINL 327 (361)
Q Consensus 279 ~IGDs~~-Di~aA~~aG~~~v~V~g~~~--~~~l~~ad~vi~sl~EL~~~ll 327 (361)
+|||+.. |+.+|+++||.+||+...+. ......+++.+.++.++..++.
T Consensus 176 ~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~~~~~~~i~~l~~l~~~~~ 227 (229)
T COG1011 176 FVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEISSLAELLDLLE 227 (229)
T ss_pred EECCChhhhhHHHHhcCcEEEEECCCCCCCCCCccCCceEEcCHHHHHHHHh
Confidence 9999986 77999999999999844332 1222568999999999988754
|
|
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=6e-21 Score=182.26 Aligned_cols=182 Identities=11% Similarity=0.042 Sum_probs=132.4
Q ss_pred CCceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcC-CHHHHHHHHH-ccCCChHHHHHHHHHHHHH
Q 018088 117 DEAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNA-GADHVLHKVL-LWGKEESELDRLNSRLTQL 193 (361)
Q Consensus 117 ~~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~-~~~~~l~~~l-~~~~~~~~~~~l~~~~~~~ 193 (361)
..+++|+|||| ||+..+ +|.++++.+|..........+.+.|. ...+.+...+ ........+
T Consensus 108 ~~~~LvvfDmDGTLI~~e-----~i~eia~~~g~~~~v~~it~~~m~Geldf~esl~~rv~~l~g~~~~i---------- 172 (322)
T PRK11133 108 RTPGLLVMDMDSTAIQIE-----CIDEIAKLAGTGEEVAEVTERAMRGELDFEASLRQRVATLKGADANI---------- 172 (322)
T ss_pred cCCCEEEEECCCCCcchH-----HHHHHHHHhCCchHHHHHHHHHHcCCcCHHHHHHHHHHHhCCCCHHH----------
Confidence 45799999999 999665 89999999987665544444555543 2333332221 111111111
Q ss_pred HHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccc-------eeEecC----C-CCCCChH
Q 018088 194 YYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQ-------AIVSEE----D-GMESMAH 261 (361)
Q Consensus 194 ~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd-------~iv~~e----~-~~~~KP~ 261 (361)
.+.+....+++||++++|+.|++.|++++|+|+++....+..++.+|+...+. ..+++. . ...+||+
T Consensus 173 -l~~v~~~l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g~iv~~k~K~~ 251 (322)
T PRK11133 173 -LQQVRENLPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTGNVLGDIVDAQYKAD 251 (322)
T ss_pred -HHHHHHhCCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEeEecCccCCcccHHH
Confidence 11112335789999999999999999999999999999999999999976553 222222 1 1346899
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeC
Q 018088 262 RFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVA 317 (361)
Q Consensus 262 ~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~ 317 (361)
.+..+++++|+++++|++|||+.||+.|++.||+++++ +..+.....||++++
T Consensus 252 ~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~---nAkp~Vk~~Ad~~i~ 304 (322)
T PRK11133 252 TLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY---HAKPKVNEQAQVTIR 304 (322)
T ss_pred HHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe---CCCHHHHhhCCEEec
Confidence 99999999999999999999999999999999998776 334444568999997
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.5e-19 Score=164.23 Aligned_cols=191 Identities=17% Similarity=0.110 Sum_probs=132.8
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcC-CHHHHHHHHHccCCChHHHHHHHHHHHHHHHH
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNA-GADHVLHKVLLWGKEESELDRLNSRLTQLYYD 196 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~-~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~ 196 (361)
+|+|||||| ||++++ .+..+++.+|.+....+.....+.+. ...+.+...+...... . ..+.+.+.+
T Consensus 12 ~k~viFDfDGTL~~~~-----~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~ 80 (224)
T PLN02954 12 ADAVCFDVDSTVCVDE-----GIDELAEFCGAGEAVAEWTAKAMGGSVPFEEALAARLSLFKPS--L----SQVEEFLEK 80 (224)
T ss_pred CCEEEEeCCCcccchH-----HHHHHHHHcCChHHHHHHHHHHHCCCCCHHHHHHHHHHHcCCC--H----HHHHHHHHH
Confidence 689999999 999986 67888999987543333332222222 3444444322221111 1 111222222
Q ss_pred hcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCC--cccceeE--------ecCC------CCCCCh
Q 018088 197 NLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLL--KYFQAIV--------SEED------GMESMA 260 (361)
Q Consensus 197 ~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~--~~Fd~iv--------~~e~------~~~~KP 260 (361)
....++||+.++|+.|+++|++++|+|++....+...++.+|+. .+|+..+ .+.+ ...+||
T Consensus 81 ---~~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~ 157 (224)
T PLN02954 81 ---RPPRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKA 157 (224)
T ss_pred ---ccCCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHH
Confidence 12468999999999999999999999999999999999999996 4664321 1111 234589
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCC-cc-cccCcceEeCChhhhHHH
Q 018088 261 HRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHR-AY-DLVQADLAVANFNELSVI 325 (361)
Q Consensus 261 ~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~-~~-~l~~ad~vi~sl~EL~~~ 325 (361)
+.+..+++++|. ++|++|||+.+|+.+|+++|+.++..++.+. .. ....+++++.++.||..+
T Consensus 158 ~~i~~~~~~~~~--~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~~ 222 (224)
T PLN02954 158 EAVQHIKKKHGY--KTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTDFQDLIEV 222 (224)
T ss_pred HHHHHHHHHcCC--CceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECCHHHHHHh
Confidence 999999999885 6899999999999999999988766555432 22 224689999999998765
|
|
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=8.5e-20 Score=163.27 Aligned_cols=101 Identities=13% Similarity=0.045 Sum_probs=91.0
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHh-CCCCcccceeEecCCCCCCC--hHHHHHHHHHcCCCCCcEEE
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALER-MGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDRKPSKCVV 279 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~-lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi~p~~~v~ 279 (361)
.++||+.++|+.|+++|++++|+||+........+.. .++..+||.++++++++..| |++|..+++++|++|++|++
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l~ 163 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADAVF 163 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHeEE
Confidence 5799999999999999999999999988877766655 47888999999999987766 57999999999999999999
Q ss_pred EcCChHHHHHHHHcCCeEEEEeCC
Q 018088 280 FEDDPRAITAAHNCTMMAVGLIGA 303 (361)
Q Consensus 280 IGDs~~Di~aA~~aG~~~v~V~g~ 303 (361)
|||+..|+.+|+++|+.++++.+.
T Consensus 164 vgD~~~di~aA~~aG~~~i~~~~~ 187 (199)
T PRK09456 164 FDDNADNIEAANALGITSILVTDK 187 (199)
T ss_pred eCCCHHHHHHHHHcCCEEEEecCC
Confidence 999999999999999999998543
|
|
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.5e-19 Score=152.42 Aligned_cols=152 Identities=18% Similarity=0.262 Sum_probs=116.9
Q ss_pred EEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHHHHHHHHHhcc
Q 018088 121 GLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLYYDNLL 199 (361)
Q Consensus 121 ~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~~l~ 199 (361)
+|+||+| ||+|+...+..+|.++++++|.+. . ......|...... .... ..+.+ +.. ..
T Consensus 1 ~iifD~DGTL~d~~~~~~~~~~~~~~~~~~~~--~--~~~~~~g~~~~~~-~~~~-------------~~~~~-~~~-~~ 60 (154)
T TIGR01549 1 AILFDIDGTLVDSSFAIRRAFEETLEEFGEDF--Q--ALKALRGLAEELL-YRIA-------------TSFEE-LLG-YD 60 (154)
T ss_pred CeEecCCCcccccHHHHHHHHHHHHHHhcccH--H--HHHHHHccChHHH-HHHH-------------HHHHH-HhC-cc
Confidence 4899999 999999999999999999998522 1 1122333322222 1111 01111 111 11
Q ss_pred cCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCC-CCChHHHHHHHHHcCCCCCcEE
Q 018088 200 SVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGM-ESMAHRFLSAAVKLDRKPSKCV 278 (361)
Q Consensus 200 ~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~-~~KP~~~~~~~~klgi~p~~~v 278 (361)
.....+||+.++|+.|+++|++++++||+....+...++.+ +..+|+.+++.++.. +++|+.|.++++++|++| +|+
T Consensus 61 ~~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~~~~Kp~~~~~~~~~~~~~~~~-~~l 138 (154)
T TIGR01549 61 AEEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDEFGAKPEPEIFLAALESLGLPP-EVL 138 (154)
T ss_pred hhheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCCCCCCcCHHHHHHHHHHcCCCC-CEE
Confidence 23356899999999999999999999999999999999998 888999999988776 334689999999999999 999
Q ss_pred EEcCChHHHHHHHHcC
Q 018088 279 VFEDDPRAITAAHNCT 294 (361)
Q Consensus 279 ~IGDs~~Di~aA~~aG 294 (361)
+|||+..|+.+|+++|
T Consensus 139 ~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 139 HVGDNLNDIEGARNAG 154 (154)
T ss_pred EEeCCHHHHHHHHHcc
Confidence 9999999999999997
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.1e-18 Score=154.44 Aligned_cols=200 Identities=14% Similarity=0.123 Sum_probs=136.0
Q ss_pred ceEEEEece-eccccHHH-------HHHHHHHHHHHhCCCCCchHHHHHHHhcC-CHHHH---HHHHHccCCChHHHHHH
Q 018088 119 AYGLIFSWD-VVADTRAL-------KLNAWKQLAFEEGKEIPQEGDVLRQILNA-GADHV---LHKVLLWGKEESELDRL 186 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~-------~~~a~~~~l~~~G~~~~~~~~~~~~~~g~-~~~~~---l~~~l~~~~~~~~~~~l 186 (361)
+++|++|+. |..+..-. ..+.+..++..+.-.. .-.. .+...+. ....+ +...+..+.....+..+
T Consensus 1 ~~~~l~diegt~~~isfv~~~lfpy~~~~~~~~l~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~k~~~lk~l 78 (220)
T TIGR01691 1 IKNVLLDIEGTTGSISFVHDVLFPYAASRLESFVNDNYEST-IVEN-LRELGKTPEELILLRKLHAEMDKDRKATPLKTL 78 (220)
T ss_pred CCEEEEecCCCcccHHHHHhhhhHHHHHHHHHHHHHhCCCH-HHHH-HHHhccCCcHHHHHHHHHHHHHcCCCcchHHHH
Confidence 468999999 99886532 2223333343332111 1111 1111111 11232 23334455555666677
Q ss_pred HHH-HHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhC---CCCcccceeEecCCCCCCChHH
Q 018088 187 NSR-LTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERM---GLLKYFQAIVSEEDGMESMAHR 262 (361)
Q Consensus 187 ~~~-~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~l---gl~~~Fd~iv~~e~~~~~KP~~ 262 (361)
... +.+.|.. ......++||+.++|+.|+++|++++|+||++...+...++.. ++..+|+.++....+.+++|+.
T Consensus 79 qg~iw~~~Y~~-~~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~fd~~~g~KP~p~~ 157 (220)
T TIGR01691 79 QGLIWRQGYES-GELTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYFDTTVGLKTEAQS 157 (220)
T ss_pred HHHHHHHHHhc-CCcccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEEEeCcccCCCHHH
Confidence 666 4555544 3445678999999999999999999999999999888888875 6777888877655555666889
Q ss_pred HHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCc--ccc-cCcceEeCChhh
Q 018088 263 FLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRA--YDL-VQADLAVANFNE 321 (361)
Q Consensus 263 ~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~--~~l-~~ad~vi~sl~E 321 (361)
|..+++++|++|++|++|||+..|+.+|+++||.++++...++. .+. ..-..++.||++
T Consensus 158 y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~v~r~g~~~~~~~~~~~~~~~~~~~~ 219 (220)
T TIGR01691 158 YVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQLVRPGNDPVVDPSFPVYPQFPDLNA 219 (220)
T ss_pred HHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEEEECCCCCCCCcccCCCCCeecCccc
Confidence 99999999999999999999999999999999999998443322 111 111556777765
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.4e-18 Score=153.27 Aligned_cols=100 Identities=9% Similarity=-0.010 Sum_probs=87.0
Q ss_pred CCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCC------------CCChHHHHHHHH
Q 018088 201 VTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGM------------ESMAHRFLSAAV 268 (361)
Q Consensus 201 ~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~------------~~KP~~~~~~~~ 268 (361)
...++||+.++|+.|+++|++++|+||+....+...++.+|+..+|+..+..++.+ ..|++.+..+++
T Consensus 78 ~~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~~ 157 (201)
T TIGR01491 78 EISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLKR 157 (201)
T ss_pred hCCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCCeEecceeeEEccccHHHHHHHHHH
Confidence 34789999999999999999999999999999999999999988887766554332 234568888999
Q ss_pred HcCCCCCcEEEEcCChHHHHHHHHcCCeEEEE
Q 018088 269 KLDRKPSKCVVFEDDPRAITAAHNCTMMAVGL 300 (361)
Q Consensus 269 klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V 300 (361)
++|++|++|++|||+.+|+.+|++||+.++..
T Consensus 158 ~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~ 189 (201)
T TIGR01491 158 ELNPSLTETVAVGDSKNDLPMFEVADISISLG 189 (201)
T ss_pred HhCCCHHHEEEEcCCHhHHHHHHhcCCeEEEC
Confidence 99999999999999999999999999987663
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=8.4e-18 Score=150.67 Aligned_cols=186 Identities=12% Similarity=0.118 Sum_probs=124.4
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhc-CCHHHHHHHHH----ccCCChHHHHHHHHHHHH
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILN-AGADHVLHKVL----LWGKEESELDRLNSRLTQ 192 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g-~~~~~~l~~~l----~~~~~~~~~~~l~~~~~~ 192 (361)
+++|+|||| ||++ +.|..+++++|++... ..+.+ ......+...+ ..+.+.+.+
T Consensus 1 ~~~v~FD~DGTL~~------~~~~~~~~~~g~~~~~-----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i--------- 60 (205)
T PRK13582 1 MEIVCLDLEGVLVP------EIWIAFAEKTGIPELR-----ATTRDIPDYDVLMKQRLDILDEHGLGLADI--------- 60 (205)
T ss_pred CeEEEEeCCCCChh------hHHHHHHHHcCChHHH-----HHhcCCCCHHHHHHHHHHHHHHcCCCHHHH---------
Confidence 478999999 9993 2677788888864311 00111 11222222111 111111111
Q ss_pred HHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCC----C--CCChHHHHHH
Q 018088 193 LYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDG----M--ESMAHRFLSA 266 (361)
Q Consensus 193 ~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~----~--~~KP~~~~~~ 266 (361)
.. ......++||+.++|+.|+++ ++++|+||+....+...++.+|+..+|+..+..++. + .++|+....+
T Consensus 61 --~~-~~~~~~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~ 136 (205)
T PRK13582 61 --QE-VIATLDPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDGMITGYDLRQPDGKRQA 136 (205)
T ss_pred --HH-HHHhCCCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCCeEECccccccchHHHH
Confidence 11 123447899999999999999 999999999999999999999999888765443211 1 2356666777
Q ss_pred HHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcce-EeCChhhhHHHHHHhh
Q 018088 267 AVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADL-AVANFNELSVINLRRL 330 (361)
Q Consensus 267 ~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~-vi~sl~EL~~~ll~~l 330 (361)
+++++..+++|+||||+.+|+.+++++|+++. + +.........+++ +++++.||..++.+.+
T Consensus 137 l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~-~-~~~~~~~~~~~~~~~~~~~~el~~~l~~~~ 199 (205)
T PRK13582 137 VKALKSLGYRVIAAGDSYNDTTMLGEADAGIL-F-RPPANVIAEFPQFPAVHTYDELLAAIDKAS 199 (205)
T ss_pred HHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEE-E-CCCHHHHHhCCcccccCCHHHHHHHHHHHH
Confidence 77787788999999999999999999998653 2 2221111124555 8999999988766544
|
|
| >TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.9e-18 Score=151.01 Aligned_cols=157 Identities=15% Similarity=0.135 Sum_probs=111.5
Q ss_pred EEEEece-eccccHHHHHHHHHHHHHHhCCC---CCc---hHHHHHHHhcC--CHHH----HHHHHHc---cCCChHHHH
Q 018088 121 GLIFSWD-VVADTRALKLNAWKQLAFEEGKE---IPQ---EGDVLRQILNA--GADH----VLHKVLL---WGKEESELD 184 (361)
Q Consensus 121 ~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~---~~~---~~~~~~~~~g~--~~~~----~l~~~l~---~~~~~~~~~ 184 (361)
+|+||+| ||+|++..+..++.+++++.+.. ... .........+. .... .+..+.. ......
T Consensus 1 ~viFD~DGTL~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--- 77 (175)
T TIGR01493 1 AMVFDVYGTLVDVHGGVRACLAAIAPEGGAFSDLWRAKQQEYSWRRSLMGDRRAFPEDTVRALRYIADRLGLDAEPK--- 77 (175)
T ss_pred CeEEecCCcCcccHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHcCCCCCHH---
Confidence 5899999 99999999999999888775421 000 00111112121 1112 2222222 111221
Q ss_pred HHHHHHHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHH
Q 018088 185 RLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHR 262 (361)
Q Consensus 185 ~l~~~~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~ 262 (361)
....+...+ ....++||+.++|+ +++|+||+....+...++++|+..+|+.+++++++...| |++
T Consensus 78 -~~~~~~~~~-----~~~~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~ 144 (175)
T TIGR01493 78 -YGERLRDAY-----KNLPPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYFDRAFSVDTVRAYKPDPVV 144 (175)
T ss_pred -HHHHHHHHH-----hcCCCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHHhhhccHhhcCCCCCCHHH
Confidence 111122212 23478999999998 379999999999999999999999999999999877666 579
Q ss_pred HHHHHHHcCCCCCcEEEEcCChHHHHHHHHc
Q 018088 263 FLSAAVKLDRKPSKCVVFEDDPRAITAAHNC 293 (361)
Q Consensus 263 ~~~~~~klgi~p~~~v~IGDs~~Di~aA~~a 293 (361)
|+.+++++|++|++|+||||+..|+.+|+++
T Consensus 145 f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 145 YELVFDTVGLPPDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred HHHHHHHHCCCHHHeEeEecChhhHHHHhcC
Confidence 9999999999999999999999999999874
|
The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.76 E-value=9.7e-18 Score=147.82 Aligned_cols=123 Identities=18% Similarity=0.091 Sum_probs=97.8
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCH---------------HHHHHHHHhCCCCcccceeEecC-----CCCCCC--h
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDR---------------RKMVEALERMGLLKYFQAIVSEE-----DGMESM--A 260 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~---------------~~~~~~L~~lgl~~~Fd~iv~~e-----~~~~~K--P 260 (361)
.++||+.++|+.|+++|++++|+||... ..+...++.+|+ +|+.++.+. +....| |
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~--~f~~i~~~~~~~~~~~~~~KP~p 106 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGG--RLDGIYYCPHHPEDGCDCRKPKP 106 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCC--ccceEEECCCCCCCCCcCCCCCH
Confidence 5799999999999999999999999862 344556777777 477776542 333445 6
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEe-CCCCcccc-cCc--ceEeCChhhhHHHHH
Q 018088 261 HRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLI-GAHRAYDL-VQA--DLAVANFNELSVINL 327 (361)
Q Consensus 261 ~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~-g~~~~~~l-~~a--d~vi~sl~EL~~~ll 327 (361)
++|..+++++|+.|++|+||||+.+|+.+|+++|+.++++. |....... ..+ ++++.++.|+..++.
T Consensus 107 ~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el~~~l~ 177 (181)
T PRK08942 107 GMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADLPQALK 177 (181)
T ss_pred HHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceeecCHHHHHHHHH
Confidence 79999999999999999999999999999999999999884 33322222 246 999999999987654
|
|
| >KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.5e-18 Score=153.76 Aligned_cols=186 Identities=18% Similarity=0.114 Sum_probs=132.5
Q ss_pred CCCceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHH---HHHHHh-------------c-CCHHHHHHHHHccC
Q 018088 116 PDEAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGD---VLRQIL-------------N-AGADHVLHKVLLWG 177 (361)
Q Consensus 116 ~~~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~---~~~~~~-------------g-~~~~~~l~~~l~~~ 177 (361)
.+.+|+|+||++ ||+.........|.++++.+|++...... ....+. | -..++++..+....
T Consensus 4 ~~~iravtfD~~~tLl~~~~~~~~~y~~i~~~~gl~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~l~~~~ww~~lv~~~ 83 (237)
T KOG3085|consen 4 LMRIRAVTFDAGGTLLATLPPVMEVYCEIAEAYGLEYDDSLIETIFRKDFKKMSEKGPFFGLYSGELTLSQWWPKLVEST 83 (237)
T ss_pred ccceEEEEEeCCCceeecCCccHHHHHHHHHHhCCCCCHHHHhHhhhHHHHhhcccCCcccccCCcccHHHHHHHHHHHH
Confidence 345899999999 99988778888999999999988543211 111110 1 12333333222111
Q ss_pred C---ChHHHHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecC
Q 018088 178 K---EESELDRLNS-RLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEE 253 (361)
Q Consensus 178 ~---~~~~~~~l~~-~~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e 253 (361)
. .....+++.. -....|........+..+++.++++.|++.|..++++||.+...- ..+..+|+..+||.++.+.
T Consensus 84 f~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~lq~lR~~g~~l~iisN~d~r~~-~~l~~~~l~~~fD~vv~S~ 162 (237)
T KOG3085|consen 84 FGKAGIDYEEELLENFSFRLFSTFAPSAWKYLDGMQELLQKLRKKGTILGIISNFDDRLR-LLLLPLGLSAYFDFVVESC 162 (237)
T ss_pred hccccchhHHHHHhhhhhheeccccccCceeccHHHHHHHHHHhCCeEEEEecCCcHHHH-HHhhccCHHHhhhhhhhhh
Confidence 1 1111111111 111222222122446788888999999999999999999876654 8888899999999999999
Q ss_pred CCCCCChH--HHHHHHHHcCCCCCcEEEEcCCh-HHHHHHHHcCCeEEEEeC
Q 018088 254 DGMESMAH--RFLSAAVKLDRKPSKCVVFEDDP-RAITAAHNCTMMAVGLIG 302 (361)
Q Consensus 254 ~~~~~KP~--~~~~~~~klgi~p~~~v~IGDs~-~Di~aA~~aG~~~v~V~g 302 (361)
+.+..||+ +|+.+++++++.|++|++|||.. ||+++|+++||.++.|..
T Consensus 163 e~g~~KPDp~If~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~ 214 (237)
T KOG3085|consen 163 EVGLEKPDPRIFQLALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVDN 214 (237)
T ss_pred hhccCCCChHHHHHHHHHhCCChHHeEEecCccccccHhHHHcCCEEEEEcc
Confidence 99888865 99999999999999999999986 589999999999998843
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=99.75 E-value=5.2e-17 Score=148.48 Aligned_cols=151 Identities=12% Similarity=0.037 Sum_probs=113.4
Q ss_pred CCCceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHHHHHHH
Q 018088 116 PDEAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLY 194 (361)
Q Consensus 116 ~~~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~ 194 (361)
.++.-+|+||+| ||+|+...+ .+|.+...... .....+......+.
T Consensus 60 ~~~p~aViFDlDgTLlDSs~~~---------~~G~~~~s~~~-~~~l~g~~~w~~~~----------------------- 106 (237)
T TIGR01672 60 GRPPIAVSFDIDDTVLFSSPGF---------WRGKKTFSPGS-EDYLKNQVFWEKVN----------------------- 106 (237)
T ss_pred CCCCeEEEEeCCCccccCcHHH---------hCCcccCCHHH-hhhhcChHHHHHHH-----------------------
Confidence 444459999999 999999765 26766432211 22233332222222
Q ss_pred HHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCC----CHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHc
Q 018088 195 YDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGL----DRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKL 270 (361)
Q Consensus 195 ~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~----~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~kl 270 (361)
........+.+++.++|+.|+++|++++++||. ....+..+++.+|+..+|+.+++++....+||+.. .+++++
T Consensus 107 -~~~~~~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~~Kp~~~-~~l~~~ 184 (237)
T TIGR01672 107 -NGWDEFSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPGQYQYTKT-QWIQDK 184 (237)
T ss_pred -HhcccCCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCCCCCCCHH-HHHHhC
Confidence 122233467888999999999999999999998 67789999999999999999999988877888765 466777
Q ss_pred CCCCCcEEEEcCChHHHHHHHHcCCeEEEE-eCCCC
Q 018088 271 DRKPSKCVVFEDDPRAITAAHNCTMMAVGL-IGAHR 305 (361)
Q Consensus 271 gi~p~~~v~IGDs~~Di~aA~~aG~~~v~V-~g~~~ 305 (361)
++ ++||||+.+|+.+|++||+.+++| ++.+.
T Consensus 185 ~i----~i~vGDs~~DI~aAk~AGi~~I~V~~g~~s 216 (237)
T TIGR01672 185 NI----RIHYGDSDNDITAAKEAGARGIRILRASNS 216 (237)
T ss_pred CC----eEEEeCCHHHHHHHHHCCCCEEEEEecCCC
Confidence 76 799999999999999999999988 55543
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.73 E-value=4.1e-17 Score=148.13 Aligned_cols=193 Identities=16% Similarity=0.098 Sum_probs=126.1
Q ss_pred eEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcC-CHHHHHHHHHccCCChHHHHHHHHHHHHHHHHh
Q 018088 120 YGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNA-GADHVLHKVLLWGKEESELDRLNSRLTQLYYDN 197 (361)
Q Consensus 120 k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~-~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~~ 197 (361)
++|+||+| ||++++..+ .++++++. ....+.....+.|. +....+...+..-... .. ....+.+
T Consensus 4 ~~vifDfDgTi~~~d~~~-----~~~~~~~~-~~~~~i~~~~~~g~~~~~~~~~~~~~~l~~~-~~----~~~~~~~--- 69 (219)
T PRK09552 4 IQIFCDFDGTITNNDNII-----AIMKKFAP-PEWEELKDDILSQELSIQEGVGQMFQLLPSN-LK----EEIIQFL--- 69 (219)
T ss_pred cEEEEcCCCCCCcchhhH-----HHHHHhCH-HHHHHHHHHHHhCCcCHHHHHHHHHHhCCCC-ch----HHHHHHH---
Confidence 48999999 999998543 24444542 11122222222233 3444444444332111 11 1111222
Q ss_pred cccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCc--cc--ceeEecCCCCCCChH--H---------
Q 018088 198 LLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLK--YF--QAIVSEEDGMESMAH--R--------- 262 (361)
Q Consensus 198 l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~--~F--d~iv~~e~~~~~KP~--~--------- 262 (361)
.....++||+.++|+.|+++|++++|+|++....+...++.+ +.. ++ +..++++.....||+ .
T Consensus 70 -~~~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~ 147 (219)
T PRK09552 70 -LETAEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGC 147 (219)
T ss_pred -HhCCCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCccccccccCCC
Confidence 234588999999999999999999999999999999999998 643 33 334455444444543 2
Q ss_pred -HHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCc--ccccCcceEeCChhhhHHHHHHhh
Q 018088 263 -FLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRA--YDLVQADLAVANFNELSVINLRRL 330 (361)
Q Consensus 263 -~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~--~~l~~ad~vi~sl~EL~~~ll~~l 330 (361)
...++++++..+++|+||||+.+|+.+|++||+..+ .+.... .....+.+.+.++.|+...+.+.+
T Consensus 148 ~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a--~~~l~~~~~~~~~~~~~~~~f~ei~~~l~~~~ 216 (219)
T PRK09552 148 CKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFA--RDFLITKCEELGIPYTPFETFHDVQTELKHLL 216 (219)
T ss_pred chHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCccee--HHHHHHHHHHcCCCccccCCHHHHHHHHHHHh
Confidence 357889999999999999999999999999999433 221111 133458888999999998865544
|
|
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=99.72 E-value=7.9e-18 Score=146.81 Aligned_cols=102 Identities=11% Similarity=0.037 Sum_probs=90.4
Q ss_pred CCCCCccHHHHHHHHhhCCCcEEEEeCC-CHHHHHHHHHhCCCC---------cccceeEecCCCCCCChH--HHHHHHH
Q 018088 201 VTEPMEGLQEWLDAVSSARIPCAVVSGL-DRRKMVEALERMGLL---------KYFQAIVSEEDGMESMAH--RFLSAAV 268 (361)
Q Consensus 201 ~~~~~pgv~elL~~L~~~Gi~vaivSn~-~~~~~~~~L~~lgl~---------~~Fd~iv~~e~~~~~KP~--~~~~~~~ 268 (361)
...++||+.++|+.|+++|++++|+||+ ....+...++.+|+. ++|+.++++++....||. ++..+.+
T Consensus 43 ~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~~~ 122 (174)
T TIGR01685 43 EVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKVNK 122 (174)
T ss_pred EEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHhhh
Confidence 4478999999999999999999999998 889999999999998 999999999886556653 5666666
Q ss_pred Hc--CCCCCcEEEEcCChHHHHHHHHcCCeEEEEeC
Q 018088 269 KL--DRKPSKCVVFEDDPRAITAAHNCTMMAVGLIG 302 (361)
Q Consensus 269 kl--gi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g 302 (361)
.+ |++|++|+||||++.|+.+|+++|+.++++..
T Consensus 123 ~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v~~ 158 (174)
T TIGR01685 123 VDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCPS 158 (174)
T ss_pred cccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEcCC
Confidence 66 79999999999999999999999999999843
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.8e-16 Score=139.08 Aligned_cols=119 Identities=14% Similarity=0.109 Sum_probs=95.7
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCH---------------HHHHHHHHhCCCCcccceeEecC-----------CC-
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDR---------------RKMVEALERMGLLKYFQAIVSEE-----------DG- 255 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~---------------~~~~~~L~~lgl~~~Fd~iv~~e-----------~~- 255 (361)
.++||+.++|+.|+++|++++|+||.+. ..+...++.+++. |+.++.+. +.
T Consensus 26 ~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~i~~~~~~~~~~~~~~~~~~ 103 (176)
T TIGR00213 26 EFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVD--LDGIYYCPHHPEGVEEFRQVCD 103 (176)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCC--ccEEEECCCCCcccccccCCCC
Confidence 6799999999999999999999999874 4455667777775 66665431 22
Q ss_pred -CCCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeE-EEE-eCCCCcccc-cCcceEeCChhhhH
Q 018088 256 -MESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMA-VGL-IGAHRAYDL-VQADLAVANFNELS 323 (361)
Q Consensus 256 -~~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~-v~V-~g~~~~~~l-~~ad~vi~sl~EL~ 323 (361)
.+++|++|..+++++|++|++|+||||+..|+++|+++|+.+ ++| +|....... ..||++++++.||.
T Consensus 104 ~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el~ 175 (176)
T TIGR00213 104 CRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNSLADLP 175 (176)
T ss_pred CCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEeccHHHhh
Confidence 244578999999999999999999999999999999999997 687 444332233 35999999999985
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.1e-16 Score=140.07 Aligned_cols=124 Identities=15% Similarity=0.125 Sum_probs=97.2
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHH--------HHHHHHHhCCCCcccceeE-ecCCCCCC--ChHHHHHHHHHcC
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRR--------KMVEALERMGLLKYFQAIV-SEEDGMES--MAHRFLSAAVKLD 271 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~--------~~~~~L~~lgl~~~Fd~iv-~~e~~~~~--KP~~~~~~~~klg 271 (361)
.++||+.++|+.|+++|++++|+||.... .....++.+|+..+|.... +++++... +|++|+.++++++
T Consensus 28 ~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~l~ 107 (173)
T PRK06769 28 TLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCPHKHGDGCECRKPSTGMLLQAAEKHG 107 (173)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECcCCCCCCCCCCCCCHHHHHHHHHHcC
Confidence 57999999999999999999999998631 2344467778766554333 34444444 4689999999999
Q ss_pred CCCCcEEEEcCChHHHHHHHHcCCeEEEEe-CCCCc------ccc--cCcceEeCChhhhHHHH
Q 018088 272 RKPSKCVVFEDDPRAITAAHNCTMMAVGLI-GAHRA------YDL--VQADLAVANFNELSVIN 326 (361)
Q Consensus 272 i~p~~~v~IGDs~~Di~aA~~aG~~~v~V~-g~~~~------~~l--~~ad~vi~sl~EL~~~l 326 (361)
++|++|+||||+.+|+.+|+++|+.+|+|. +.... ..+ ..+++++.++.|+..++
T Consensus 108 ~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~~~~~el~~~l 171 (173)
T PRK06769 108 LDLTQCAVIGDRWTDIVAAAKVNATTILVRTGAGYDALHTYRDKWAHIEPNYIAENFEDAVNWI 171 (173)
T ss_pred CCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCchhhhhhhcccccCCCcchhhCHHHHHHHH
Confidence 999999999999999999999999999993 43221 222 35899999999998764
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.6e-16 Score=143.36 Aligned_cols=165 Identities=17% Similarity=0.141 Sum_probs=124.3
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCC-HHHHHHHH--HccCCChHHHHHHHHHHHHHH
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAG-ADHVLHKV--LLWGKEESELDRLNSRLTQLY 194 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~-~~~~l~~~--l~~~~~~~~~~~l~~~~~~~~ 194 (361)
.++++|||| ||++. ++|..+++..|..........+.+.+.- ....+... ...+.+...+.+....+
T Consensus 5 ~~L~vFD~D~TLi~~-----~~~~~~~~~~g~~~~v~~~t~~~~~~~~~~~~~~~~~v~~l~g~~~~~v~~~~~~~---- 75 (212)
T COG0560 5 KKLAVFDLDGTLINA-----ELIDELARGAGVGEEVLAITERAMRGELDFEESLRLRVALLKGLPVEVLEEVREEF---- 75 (212)
T ss_pred cceEEEecccchhhH-----HHHHHHHHHhCCHHHHHHHHHHHhcccccHHHHHHHHHHHhCCCCHHHHHHHHHhc----
Confidence 579999999 99994 4888888888876655555555555543 22222211 11222333333222211
Q ss_pred HHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCC---C---------CCChHH
Q 018088 195 YDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDG---M---------ESMAHR 262 (361)
Q Consensus 195 ~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~---~---------~~KP~~ 262 (361)
..++||+.++++.+++.|++++|+|+++...+..+.+.+|++..+...+..+++ + ..|-+.
T Consensus 76 -------~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~ 148 (212)
T COG0560 76 -------LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKA 148 (212)
T ss_pred -------CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEeceeeeeecCcchHHHH
Confidence 588999999999999999999999999999999999999999888766555541 1 236678
Q ss_pred HHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEE
Q 018088 263 FLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVG 299 (361)
Q Consensus 263 ~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~ 299 (361)
+..+++++|+++++++++|||.||+.|.+.+|.+.+.
T Consensus 149 l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~ 185 (212)
T COG0560 149 LRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAV 185 (212)
T ss_pred HHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEe
Confidence 9999999999999999999999999999999998665
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.2e-15 Score=134.38 Aligned_cols=92 Identities=14% Similarity=0.095 Sum_probs=81.0
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCC----------------------CCCCC
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEED----------------------GMESM 259 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~----------------------~~~~K 259 (361)
.++.||+.++|+.|+++|++++|+||+....+...++.+|+..+|+.+++++. .+..|
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~K 150 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCCK 150 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCCCH
Confidence 47899999999999999999999999999999999999999999999997543 22348
Q ss_pred hHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCe
Q 018088 260 AHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMM 296 (361)
Q Consensus 260 P~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~ 296 (361)
++++..+.++. +++|++|||+.+|+.+|++|++.
T Consensus 151 ~~~~~~~~~~~---~~~~i~iGD~~~D~~aa~~~d~~ 184 (188)
T TIGR01489 151 GKVIHKLSEPK---YQHIIYIGDGVTDVCPAKLSDVV 184 (188)
T ss_pred HHHHHHHHhhc---CceEEEECCCcchhchHhcCCcc
Confidence 88888887765 89999999999999999999754
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=99.65 E-value=7.7e-16 Score=126.99 Aligned_cols=101 Identities=23% Similarity=0.376 Sum_probs=91.9
Q ss_pred cCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCC------------------CCChH
Q 018088 200 SVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGM------------------ESMAH 261 (361)
Q Consensus 200 ~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~------------------~~KP~ 261 (361)
....++|++.++|+.|+++|++++++|++....+...++.+|+..+|+.+++.+... ++|++
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPD 100 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccCCCCHH
Confidence 345889999999999999999999999999999999999999988899888876544 55788
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEE
Q 018088 262 RFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGL 300 (361)
Q Consensus 262 ~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V 300 (361)
.+..+.++++..++++++|||+.+|+.+++++|+.+++|
T Consensus 101 ~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~v 139 (139)
T cd01427 101 KLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV 139 (139)
T ss_pred HHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceeeC
Confidence 999999999999999999999999999999999998874
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.64 E-value=3.8e-15 Score=133.68 Aligned_cols=179 Identities=12% Similarity=0.119 Sum_probs=115.0
Q ss_pred eEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcC-CHHHHHHHH---Hc-cCCChHHHHHHHHHHHHH
Q 018088 120 YGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNA-GADHVLHKV---LL-WGKEESELDRLNSRLTQL 193 (361)
Q Consensus 120 k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~-~~~~~l~~~---l~-~~~~~~~~~~l~~~~~~~ 193 (361)
++++|||| ||++. .|.+++.+.|..... ....+. .....+... +. .+.+...+
T Consensus 2 ~la~FDlD~TLi~~------~w~~~~~~~g~~~~~-----~~~~~~~~~~~~~~~r~~ll~~~g~~~~~i---------- 60 (203)
T TIGR02137 2 EIACLDLEGVLVPE------IWIAFAEKTGIDALK-----ATTRDIPDYDVLMKQRLRILDEHGLKLGDI---------- 60 (203)
T ss_pred eEEEEeCCcccHHH------HHHHHHHHcCCcHHH-----HHhcCCcCHHHHHHHHHHHHHHCCCCHHHH----------
Confidence 57999999 99964 488899998853211 111111 122222211 11 12233222
Q ss_pred HHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccce--------eEecCCCC--CCChHHH
Q 018088 194 YYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQA--------IVSEEDGM--ESMAHRF 263 (361)
Q Consensus 194 ~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~--------iv~~e~~~--~~KP~~~ 263 (361)
.+.+ ....++||+.++|+.|++.+ +++|+|+++...+..+++.+|+..+|.. .+++.... ..|...+
T Consensus 61 -~~~~-~~i~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~tG~~~~~~~~K~~~l 137 (203)
T TIGR02137 61 -QEVI-ATLKPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSV 137 (203)
T ss_pred -HHHH-HhCCCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCeeECeeecCcchHHHHH
Confidence 1111 23478999999999999984 9999999999999999999999988863 22222111 1233344
Q ss_pred HHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccC-cc-eEeCChhhhHHHHHHh
Q 018088 264 LSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQ-AD-LAVANFNELSVINLRR 329 (361)
Q Consensus 264 ~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~-ad-~vi~sl~EL~~~ll~~ 329 (361)
..+ ++.+. +|++|||+.||+.|++.||+++++-. .+....+ +| .++.+++||...+.+.
T Consensus 138 ~~l-~~~~~---~~v~vGDs~nDl~ml~~Ag~~ia~~a---k~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 138 IAF-KSLYY---RVIAAGDSYNDTTMLSEAHAGILFHA---PENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred HHH-HhhCC---CEEEEeCCHHHHHHHHhCCCCEEecC---CHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 433 55553 89999999999999999999977722 1222222 22 5677999988876554
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.63 E-value=9.5e-15 Score=128.19 Aligned_cols=202 Identities=15% Similarity=0.130 Sum_probs=136.6
Q ss_pred CceEEEEece-eccccHHHHHHHHH----HHH-HHhCCCCCchHHHHHHHhc-CCHHHHHHHHHccCCChHHHHHHHHHH
Q 018088 118 EAYGLIFSWD-VVADTRALKLNAWK----QLA-FEEGKEIPQEGDVLRQILN-AGADHVLHKVLLWGKEESELDRLNSRL 190 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~~~~a~~----~~l-~~~G~~~~~~~~~~~~~~g-~~~~~~l~~~l~~~~~~~~~~~l~~~~ 190 (361)
.+++++||+| ||+.....+..+.. +++ +++|++......+.....- .+....-....+...+..+..+.....
T Consensus 14 ~~~~l~FDiDdtLYp~St~i~~~~~~nI~~f~~eklgi~~e~a~~L~~~~yk~YG~t~aGL~~~~~~~d~deY~~~V~~~ 93 (244)
T KOG3109|consen 14 NYKCLFFDIDDTLYPLSTGIQLMMRNNIQEFFVEKLGISEEEAEELRESLYKEYGLTMAGLKAVGYIFDADEYHRFVHGR 93 (244)
T ss_pred cceEEEEecccccccCchhHHHHHHHHHHHHHHHHhCCChhhhHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHHHhhcc
Confidence 4799999999 99987655444433 443 5578776544333222111 111111112223333444433322211
Q ss_pred HHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCC---CC---C--hHH
Q 018088 191 TQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGM---ES---M--AHR 262 (361)
Q Consensus 191 ~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~---~~---K--P~~ 262 (361)
.- .+..+|-+-++.+|-.|++.+ .++.||+.+..+.+.|+.+|+.+.|+.+++.+... .. | +..
T Consensus 94 LP------lq~LkPD~~LRnlLL~l~~r~--k~~FTNa~k~HA~r~Lk~LGieDcFegii~~e~~np~~~~~vcKP~~~a 165 (244)
T KOG3109|consen 94 LP------LQDLKPDPVLRNLLLSLKKRR--KWIFTNAYKVHAIRILKKLGIEDCFEGIICFETLNPIEKTVVCKPSEEA 165 (244)
T ss_pred Cc------HhhcCCCHHHHHHHHhCcccc--EEEecCCcHHHHHHHHHHhChHHhccceeEeeccCCCCCceeecCCHHH
Confidence 11 122478889999999999875 89999999999999999999999999999987543 11 4 469
Q ss_pred HHHHHHHcCCC-CCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhhhHHHHHHhh
Q 018088 263 FLSAAVKLDRK-PSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNELSVINLRRL 330 (361)
Q Consensus 263 ~~~~~~klgi~-p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~EL~~~ll~~l 330 (361)
|..+.+..|+. |.+|++|+||.++|..|++.|+++++|.-.+.. .++|+++.+.-+....+...|
T Consensus 166 fE~a~k~agi~~p~~t~FfDDS~~NI~~ak~vGl~tvlv~~~~~~---~~~d~~l~~ih~~k~a~p~l~ 231 (244)
T KOG3109|consen 166 FEKAMKVAGIDSPRNTYFFDDSERNIQTAKEVGLKTVLVGREHKI---KGVDYALEQIHNNKEALPELW 231 (244)
T ss_pred HHHHHHHhCCCCcCceEEEcCchhhHHHHHhccceeEEEEeeecc---cchHHHHHHhhchhhhchHHh
Confidence 99999999998 999999999999999999999999987432222 345666665555554444433
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.62 E-value=5.9e-15 Score=133.57 Aligned_cols=192 Identities=14% Similarity=0.038 Sum_probs=121.3
Q ss_pred EEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcC-CHHHHHHHHHccCCChHHHHHHHHHHHHHHHHhcc
Q 018088 122 LIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNA-GADHVLHKVLLWGKEESELDRLNSRLTQLYYDNLL 199 (361)
Q Consensus 122 VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~-~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~~l~ 199 (361)
|+||+| ||.+.+ .+..+++.++.+ ...+.....+.+. +..+.+...+..-.... .+ . +.+.+.
T Consensus 2 ~~fDFDgTit~~d-----~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~e~~~~~~~~~~~~~-~~----~----~~~~~~ 66 (214)
T TIGR03333 2 IICDFDGTITNND-----NIISIMKQFAPP-EWEALKDGVLSKTLSIQEGVGRMFGLLPSSL-KE----E----ITSFVL 66 (214)
T ss_pred EEeccCCCCCcch-----hHHHHHHHhCcH-HHHHHHHHHHcCCccHHHHHHHHHhhCCCch-HH----H----HHHHHH
Confidence 799999 999877 333444444321 1122222333333 25555555443322221 11 1 111111
Q ss_pred cCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCccc---ceeEecCCCCCCCh--HHH----------H
Q 018088 200 SVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYF---QAIVSEEDGMESMA--HRF----------L 264 (361)
Q Consensus 200 ~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~F---d~iv~~e~~~~~KP--~~~----------~ 264 (361)
....++||+.++|+.|+++|++++|+|++....+..+++.++...++ +.++.++.....|| +.+ .
T Consensus 67 ~~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~ 146 (214)
T TIGR03333 67 ETAEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKP 146 (214)
T ss_pred hcCcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHH
Confidence 23578999999999999999999999999999999999987544443 23444433333344 332 4
Q ss_pred HHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCC--cccccCcceEeCChhhhHHHHHHhh
Q 018088 265 SAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHR--AYDLVQADLAVANFNELSVINLRRL 330 (361)
Q Consensus 265 ~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~--~~~l~~ad~vi~sl~EL~~~ll~~l 330 (361)
.++++++..+++|+||||+.+|+.+|++||+. .+.+... ......+...+.++.|+...+.+++
T Consensus 147 ~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~--~ar~~l~~~~~~~~~~~~~~~~f~di~~~l~~~~ 212 (214)
T TIGR03333 147 SLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLC--FARDYLLNECEELGLNHAPFQDFYDVRKELENVK 212 (214)
T ss_pred HHHHHHhhcCCcEEEEeCCHHHHHHHHhCCee--EehHHHHHHHHHcCCCccCcCCHHHHHHHHHHHh
Confidence 67777778899999999999999999999983 2222111 1222347777899999988876544
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.6e-15 Score=130.64 Aligned_cols=187 Identities=16% Similarity=0.097 Sum_probs=131.5
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcC-CHHHHHHHHHccCCChHHHHHHHHHHHHHHHH
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNA-GADHVLHKVLLWGKEESELDRLNSRLTQLYYD 196 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~-~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~ 196 (361)
.++|+||+| |++..+ .++++++..|+.....+...+.|-|. +.++.+...+.. .+-......+
T Consensus 16 ~~aVcFDvDSTvi~eE-----gIdelA~~~G~~~~Va~~T~rAMng~~~F~eaL~~Rl~l----------lqp~~~qv~~ 80 (227)
T KOG1615|consen 16 ADAVCFDVDSTVIQEE-----GIDELAAYCGVGEAVAEVTRRAMNGEADFQEALAARLSL----------LQPLQVQVEQ 80 (227)
T ss_pred cCeEEEecCcchhHHh-----hHHHHHHHhCchHHHHHHHHHHhCCCCcHHHHHHHHHHH----------hcccHHHHHH
Confidence 589999999 999888 88999999998877777777777665 455555544322 1222222222
Q ss_pred hcc-cCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCc--ccc--------eeEecCCC------CCCC
Q 018088 197 NLL-SVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLK--YFQ--------AIVSEEDG------MESM 259 (361)
Q Consensus 197 ~l~-~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~--~Fd--------~iv~~e~~------~~~K 259 (361)
.+. ....+.||++++.+.|+++|.+++++|++++..+..+-+.+|+.. .|. .-+.+.+. ..+|
T Consensus 81 ~v~~~k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggK 160 (227)
T KOG1615|consen 81 FVIKQKPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGK 160 (227)
T ss_pred HHhcCCCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCccccCCcc
Confidence 222 355789999999999999999999999999999999999999975 332 22222111 1348
Q ss_pred hHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcc-cccCcceEeCChhhhH
Q 018088 260 AHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAY-DLVQADLAVANFNELS 323 (361)
Q Consensus 260 P~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~-~l~~ad~vi~sl~EL~ 323 (361)
++.+..+.+ |.+-+.++||||+.+|++|..- |.-.++..+..-.+ ....+.|.+.+|..|.
T Consensus 161 a~~i~~lrk--~~~~~~~~mvGDGatDlea~~p-a~afi~~~g~~~r~~vk~nak~~~~~f~~L~ 222 (227)
T KOG1615|consen 161 AEVIALLRK--NYNYKTIVMVGDGATDLEAMPP-ADAFIGFGGNVIREGVKANAKWYVTDFYVLG 222 (227)
T ss_pred HHHHHHHHh--CCChheeEEecCCccccccCCc-hhhhhccCCceEcHhhHhccHHHHHHHHHHc
Confidence 888888888 7788999999999999998776 33334433332222 2245778777777653
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.3e-14 Score=125.10 Aligned_cols=93 Identities=14% Similarity=0.085 Sum_probs=79.2
Q ss_pred CCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCC--------------CCCCChHHHHHH
Q 018088 201 VTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEED--------------GMESMAHRFLSA 266 (361)
Q Consensus 201 ~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~--------------~~~~KP~~~~~~ 266 (361)
...+.||+.++++.++++|++++|+|++....+...++.+|+..+|...+..++ ....|+..+..+
T Consensus 71 ~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~~~ 150 (177)
T TIGR01488 71 QVALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLKEL 150 (177)
T ss_pred cCCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCEEeCccCCcccCCcchHHHHHHHH
Confidence 346799999999999999999999999999999999999999887765444321 123367888888
Q ss_pred HHHcCCCCCcEEEEcCChHHHHHHHHc
Q 018088 267 AVKLDRKPSKCVVFEDDPRAITAAHNC 293 (361)
Q Consensus 267 ~~klgi~p~~~v~IGDs~~Di~aA~~a 293 (361)
++++++++++|++|||+.+|+.|++.|
T Consensus 151 ~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 151 LEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 999999999999999999999999865
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=4.9e-14 Score=128.83 Aligned_cols=99 Identities=12% Similarity=0.090 Sum_probs=81.4
Q ss_pred cCCCCCccHHHHHHHHhhCCCcEEEEeCC----CHHHHHHHHHhCCC--CcccceeEecCCCCCCChHHHHHHHHHcCCC
Q 018088 200 SVTEPMEGLQEWLDAVSSARIPCAVVSGL----DRRKMVEALERMGL--LKYFQAIVSEEDGMESMAHRFLSAAVKLDRK 273 (361)
Q Consensus 200 ~~~~~~pgv~elL~~L~~~Gi~vaivSn~----~~~~~~~~L~~lgl--~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~ 273 (361)
....|.||++++|+.|+++|++++++||. ....+..+++.+|+ .++|+.+++++.. .||+... +++++++
T Consensus 111 ~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~--~K~~K~~-~l~~~~i- 186 (237)
T PRK11009 111 EFSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP--GQYTKTQ-WLKKKNI- 186 (237)
T ss_pred ccCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC--CCCCHHH-HHHhcCC-
Confidence 34578999999999999999999999994 46678888888999 8999999988764 4544332 4556666
Q ss_pred CCcEEEEcCChHHHHHHHHcCCeEEEE-eCCCC
Q 018088 274 PSKCVVFEDDPRAITAAHNCTMMAVGL-IGAHR 305 (361)
Q Consensus 274 p~~~v~IGDs~~Di~aA~~aG~~~v~V-~g~~~ 305 (361)
+++|||+.+|+.+|++||+.+|+| +|.++
T Consensus 187 ---~I~IGDs~~Di~aA~~AGi~~I~v~~G~~~ 216 (237)
T PRK11009 187 ---RIFYGDSDNDITAAREAGARGIRILRAANS 216 (237)
T ss_pred ---eEEEcCCHHHHHHHHHcCCcEEEEecCCCC
Confidence 999999999999999999999988 55543
|
|
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.2e-14 Score=122.20 Aligned_cols=98 Identities=21% Similarity=0.257 Sum_probs=81.5
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCH---------------HHHHHHHHhCCCCcccceeEe----cCCC--CCCChH
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDR---------------RKMVEALERMGLLKYFQAIVS----EEDG--MESMAH 261 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~---------------~~~~~~L~~lgl~~~Fd~iv~----~e~~--~~~KP~ 261 (361)
+++||+.++|+.|+++|++++|+||... ..+...++.+|+... ..+++ ++.. .+++|+
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~~~~~~~~~~KP~~~ 105 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVD-GVLFCPHHPADNCSCRKPKPG 105 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCcee-EEEECCCCCCCCCCCCCCCHH
Confidence 5799999999999999999999999873 466778888998521 12222 3333 355678
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEe
Q 018088 262 RFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLI 301 (361)
Q Consensus 262 ~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~ 301 (361)
+|+.+++++|++|++|+||||+..|+++|+++|+.+|+|.
T Consensus 106 ~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v~i~ 145 (147)
T TIGR01656 106 LILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAVLLV 145 (147)
T ss_pred HHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEEEec
Confidence 9999999999999999999999999999999999999984
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=99.55 E-value=3.8e-14 Score=118.21 Aligned_cols=97 Identities=15% Similarity=0.210 Sum_probs=83.8
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCC--------HHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHc-CCC
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLD--------RRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKL-DRK 273 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~--------~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~kl-gi~ 273 (361)
.++||+.++|+.|+++|++++++||+. ...+...++++|+.. +.++......+++|+.|..+++++ +++
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~~~~KP~~~~~~~~~~~~~~~~ 102 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPI--DVLYACPHCRKPKPGMFLEALKRFNEID 102 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCE--EEEEECCCCCCCChHHHHHHHHHcCCCC
Confidence 579999999999999999999999998 788999999999863 333333334455678999999999 599
Q ss_pred CCcEEEEcC-ChHHHHHHHHcCCeEEEEe
Q 018088 274 PSKCVVFED-DPRAITAAHNCTMMAVGLI 301 (361)
Q Consensus 274 p~~~v~IGD-s~~Di~aA~~aG~~~v~V~ 301 (361)
|++|+|||| +..|+.+|+++|+.+|++.
T Consensus 103 ~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~ 131 (132)
T TIGR01662 103 PEESVYVGDQDLTDLQAAKRAGLAFILVA 131 (132)
T ss_pred hhheEEEcCCCcccHHHHHHCCCeEEEee
Confidence 999999999 7999999999999999974
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.5e-14 Score=125.15 Aligned_cols=99 Identities=12% Similarity=0.114 Sum_probs=85.5
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCC---------------CHHHHHHHHHhCCCCcccceeE-e----cCCCCCCC--h
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGL---------------DRRKMVEALERMGLLKYFQAIV-S----EEDGMESM--A 260 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~---------------~~~~~~~~L~~lgl~~~Fd~iv-~----~e~~~~~K--P 260 (361)
.++||+.++|+.|+++|++++|+||. ....+...++.+|+. |+.++ + +++....| |
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~ii~~~~~~~~~~~~~KP~~ 106 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDDVLICPHFPDDNCDCRKPKI 106 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeEEEECCCCCCCCCCCCCCCH
Confidence 78999999999999999999999996 355778889999996 77554 4 35554444 6
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCC
Q 018088 261 HRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGA 303 (361)
Q Consensus 261 ~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~ 303 (361)
+++..++++++++|++|+||||+.+|+++|+++|+.++++...
T Consensus 107 ~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~~~~ 149 (161)
T TIGR01261 107 KLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQYDEE 149 (161)
T ss_pred HHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEEChh
Confidence 8999999999999999999999999999999999999998543
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.8e-14 Score=119.92 Aligned_cols=88 Identities=19% Similarity=0.246 Sum_probs=80.2
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCC-CHHHHHHHHHhCC-------CCcccceeEecCCCCCCChHHHHHHHHHcC--C
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGL-DRRKMVEALERMG-------LLKYFQAIVSEEDGMESMAHRFLSAAVKLD--R 272 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~-~~~~~~~~L~~lg-------l~~~Fd~iv~~e~~~~~KP~~~~~~~~klg--i 272 (361)
+++||+.++|+.|+++|++++++||+ ....+...++..+ +..+|+.++++++ .+||++|..+++++| +
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~~~~~--~pkp~~~~~a~~~lg~~~ 106 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLTIGYW--LPKSPRLVEIALKLNGVL 106 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhhhhhhcCC--CcHHHHHHHHHHHhcCCC
Confidence 57999999999999999999999999 8888999999988 8899999998865 378999999999999 9
Q ss_pred CCCcEEEEcCChHHHHHHHH
Q 018088 273 KPSKCVVFEDDPRAITAAHN 292 (361)
Q Consensus 273 ~p~~~v~IGDs~~Di~aA~~ 292 (361)
.|++|+||||+..|+...+.
T Consensus 107 ~p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 107 KPKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred CcceEEEECCCHhHHHHHHh
Confidence 99999999999999876653
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.4e-13 Score=122.95 Aligned_cols=119 Identities=9% Similarity=0.005 Sum_probs=92.8
Q ss_pred cCCChHHHHHHHHHHHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccce-eEecCC
Q 018088 176 WGKEESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQA-IVSEED 254 (361)
Q Consensus 176 ~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~-iv~~e~ 254 (361)
.+.+.+++......+.+.+ + ...++||+.++|+.++++|++++|+|++....+...++.+|+..+|.. +...++
T Consensus 65 ~g~~~~~l~~~~~~~~~~~---~--~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~ 139 (202)
T TIGR01490 65 AGLLEEDVRAIVEEFVNQK---I--ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESED 139 (202)
T ss_pred cCCCHHHHHHHHHHHHHHH---H--HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCC
Confidence 3556666655554443322 1 226799999999999999999999999999999999999999888755 222111
Q ss_pred ------------CCCCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEE
Q 018088 255 ------------GMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVG 299 (361)
Q Consensus 255 ------------~~~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~ 299 (361)
.+..|+..+..++++.++++++|+++|||.+|+.+++.+|..++.
T Consensus 140 g~~~g~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v 196 (202)
T TIGR01490 140 GIYTGNIDGNNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVV 196 (202)
T ss_pred CEEeCCccCCCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEe
Confidence 113366788999999999999999999999999999999988655
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.49 E-value=3.7e-14 Score=127.11 Aligned_cols=87 Identities=20% Similarity=0.253 Sum_probs=76.0
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChH--HHHHHHHHcCCCCCcEEEE
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAH--RFLSAAVKLDRKPSKCVVF 280 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~--~~~~~~~klgi~p~~~v~I 280 (361)
+++|++.++|+.|++.|++++++|+.....+....+.+|+.+ .++.++.. +||+ +|..+++++++.+++|+||
T Consensus 127 ~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~---~~v~a~~~--~kP~~k~~~~~i~~l~~~~~~v~~v 201 (215)
T PF00702_consen 127 PLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD---SIVFARVI--GKPEPKIFLRIIKELQVKPGEVAMV 201 (215)
T ss_dssp EBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS---EEEEESHE--TTTHHHHHHHHHHHHTCTGGGEEEE
T ss_pred cchhhhhhhhhhhhccCcceeeeecccccccccccccccccc---cccccccc--ccccchhHHHHHHHHhcCCCEEEEE
Confidence 679999999999999999999999999999999999999943 33333222 5664 7799999999999999999
Q ss_pred cCChHHHHHHHHcC
Q 018088 281 EDDPRAITAAHNCT 294 (361)
Q Consensus 281 GDs~~Di~aA~~aG 294 (361)
||+.||+.|+++||
T Consensus 202 GDg~nD~~al~~Ag 215 (215)
T PF00702_consen 202 GDGVNDAPALKAAG 215 (215)
T ss_dssp ESSGGHHHHHHHSS
T ss_pred ccCHHHHHHHHhCc
Confidence 99999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.8e-13 Score=119.14 Aligned_cols=115 Identities=9% Similarity=0.095 Sum_probs=92.6
Q ss_pred HHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHH
Q 018088 212 LDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAH 291 (361)
Q Consensus 212 L~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~ 291 (361)
+..|++.|++++|+||.....+...++.+|+..+|+.+ ++||+.+..++++++++|++|++|||+.||+.|++
T Consensus 43 ~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~f~~~-------kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~ 115 (169)
T TIGR02726 43 VIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRFHEGI-------KKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMK 115 (169)
T ss_pred HHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEEEecC-------CCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHH
Confidence 56688899999999999999999999999999888743 58899999999999999999999999999999999
Q ss_pred HcCCeEEEEeCCCCcccccCcceEeCChhh--hHHHHHHhhHhcCC
Q 018088 292 NCTMMAVGLIGAHRAYDLVQADLAVANFNE--LSVINLRRLFANKG 335 (361)
Q Consensus 292 ~aG~~~v~V~g~~~~~~l~~ad~vi~sl~E--L~~~ll~~l~~~~~ 335 (361)
.+|++.+. .+........|++++.+-.+ ....+.+.++.++|
T Consensus 116 ~ag~~~am--~nA~~~lk~~A~~I~~~~~~~g~v~e~~e~il~~~~ 159 (169)
T TIGR02726 116 RVGLAVAV--GDAVADVKEAAAYVTTARGGHGAVREVAELILKAQG 159 (169)
T ss_pred HCCCeEEC--cCchHHHHHhCCEEcCCCCCCCHHHHHHHHHHHhcC
Confidence 99999776 23334444568888754332 33445555555555
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=99.46 E-value=6.8e-14 Score=119.37 Aligned_cols=96 Identities=14% Similarity=0.128 Sum_probs=88.1
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCc-ccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEE
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLK-YFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVF 280 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~-~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~I 280 (361)
..++||+.++|+.|+ .+++++|+|++...+++..++.+++.. +|+.+++.+++...||+ |.++++++|++|++||+|
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~~~KP~-~~k~l~~l~~~p~~~i~i 121 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECVFVKGK-YVKDLSLLGRDLSNVIII 121 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECccccccCCe-EeecHHHcCCChhcEEEE
Confidence 467999999999998 569999999999999999999999965 56999999999999998 999999999999999999
Q ss_pred cCChHHHHHHHHcCCeEEE
Q 018088 281 EDDPRAITAAHNCTMMAVG 299 (361)
Q Consensus 281 GDs~~Di~aA~~aG~~~v~ 299 (361)
||+++|+.+++++|+.+--
T Consensus 122 ~Ds~~~~~aa~~ngI~i~~ 140 (148)
T smart00577 122 DDSPDSWPFHPENLIPIKP 140 (148)
T ss_pred ECCHHHhhcCccCEEEecC
Confidence 9999999999999977543
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.3e-12 Score=114.15 Aligned_cols=97 Identities=12% Similarity=0.185 Sum_probs=81.8
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCC-HHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEc
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLD-RRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFE 281 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~-~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IG 281 (361)
.++||+.++|+.|++.|++++++||+. ...+...++.+|+..++ ...+++|++|..++++++++|++|+|||
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~~-------~~~KP~p~~~~~~l~~~~~~~~~~l~IG 115 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVLP-------HAVKPPGCAFRRAHPEMGLTSEQVAVVG 115 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEEc-------CCCCCChHHHHHHHHHcCCCHHHEEEEC
Confidence 679999999999999999999999998 57777777788874332 1235678899999999999999999999
Q ss_pred CCh-HHHHHHHHcCCeEEEE-eCCCCc
Q 018088 282 DDP-RAITAAHNCTMMAVGL-IGAHRA 306 (361)
Q Consensus 282 Ds~-~Di~aA~~aG~~~v~V-~g~~~~ 306 (361)
|+. .|+.+|+++|+.+|+| +|.+..
T Consensus 116 Ds~~~Di~aA~~aGi~~i~v~~g~~~~ 142 (170)
T TIGR01668 116 DRLFTDVMGGNRNGSYTILVEPLVHPD 142 (170)
T ss_pred CcchHHHHHHHHcCCeEEEEccCcCCc
Confidence 998 6999999999999999 443333
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=99.45 E-value=6.6e-14 Score=131.80 Aligned_cols=118 Identities=17% Similarity=0.194 Sum_probs=89.7
Q ss_pred CCccHHHHHHHHhhCCCcEEEEeCCCHHHHH-HHHHhCCCCcccceeEe---cCCCCCCC--hHHHHHHHHHcCCCCCcE
Q 018088 204 PMEGLQEWLDAVSSARIPCAVVSGLDRRKMV-EALERMGLLKYFQAIVS---EEDGMESM--AHRFLSAAVKLDRKPSKC 277 (361)
Q Consensus 204 ~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~-~~L~~lgl~~~Fd~iv~---~e~~~~~K--P~~~~~~~~klgi~p~~~ 277 (361)
.++++.++++.|++.|+ ++|+||.+..... ..+...|+..+|+.+.. .+....+| |++|..+++++|++|++|
T Consensus 144 ~y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~~~~~~~~~g~~~~~i~~~~g~~~~~~gKP~p~~~~~~~~~~~~~~~~~ 222 (279)
T TIGR01452 144 SYAKLREACAHLREPGC-LFVATNRDPWHPLSDGSRTPGTGSLVAAIETASGRQPLVVGKPSPYMFECITENFSIDPART 222 (279)
T ss_pred CHHHHHHHHHHHhcCCC-EEEEeCCCCCCCCcCCCcccChHHHHHHHHHHhCCceeccCCCCHHHHHHHHHHhCCChhhE
Confidence 37899999999998887 7899998764432 22334466666665543 33333345 579999999999999999
Q ss_pred EEEcCCh-HHHHHHHHcCCeEEEE-eCCCCcccc----------cCcceEeCChhhh
Q 018088 278 VVFEDDP-RAITAAHNCTMMAVGL-IGAHRAYDL----------VQADLAVANFNEL 322 (361)
Q Consensus 278 v~IGDs~-~Di~aA~~aG~~~v~V-~g~~~~~~l----------~~ad~vi~sl~EL 322 (361)
+||||+. .|+.+|+++|+.+++| +|.+...++ .+||++++++.||
T Consensus 223 lmIGD~~~tDI~~A~~aGi~si~V~~G~~~~~~l~~~~~~~~~~~~Pd~~~~~l~~l 279 (279)
T TIGR01452 223 LMVGDRLETDILFGHRCGMTTVLVLSGVSRLEEAQEYLAAGQHDLVPDYVVESLADL 279 (279)
T ss_pred EEECCChHHHHHHHHHcCCcEEEECCCCCCHHHHHhhhcccccCCCCCEEecccccC
Confidence 9999995 8999999999999999 666654433 2599999999875
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=1e-11 Score=112.14 Aligned_cols=174 Identities=12% Similarity=0.092 Sum_probs=113.7
Q ss_pred CceEEEEece-eccccHHHHHHHHHHHH-HHhCCCCCchHHHHHHHhcCCHHHHHHH-H---------HccCCChHHHHH
Q 018088 118 EAYGLIFSWD-VVADTRALKLNAWKQLA-FEEGKEIPQEGDVLRQILNAGADHVLHK-V---------LLWGKEESELDR 185 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~~~~a~~~~l-~~~G~~~~~~~~~~~~~~g~~~~~~l~~-~---------l~~~~~~~~~~~ 185 (361)
+.+++|||+| ||++. .....+..++ +++|+....... ...+.|.+....... . ...+.+..++++
T Consensus 5 ~~k~~iFD~DGTL~~~--d~~~~~~~~~~~~~g~~~~~~~~-~~~~ig~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 81 (211)
T PRK11590 5 ERRVVFFDLDGTLHQQ--DMFGSFLRYLLRRQPLNLLLVLP-LLPVIGLGLLVKGRAARWPMSLLLWGCTFGHSEARLQA 81 (211)
T ss_pred cceEEEEecCCCCccc--chHHHHHHHHHHhcchhhHHHhH-HHHHhccCcccchhhhhhhHHHHHHHHHcCCCHHHHHH
Confidence 4689999999 99933 3556677776 778865433222 223344433322211 1 012346666677
Q ss_pred HHHHHHHHHHHhcccCCCCCccHHHHH-HHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCC----CCC--C
Q 018088 186 LNSRLTQLYYDNLLSVTEPMEGLQEWL-DAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEED----GME--S 258 (361)
Q Consensus 186 l~~~~~~~~~~~l~~~~~~~pgv~elL-~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~----~~~--~ 258 (361)
+...+.+.|.+. ..++||+.+.| +.+++.|++++|+||++...++..++.+|+.. .+.+++++- .+. +
T Consensus 82 ~~~~f~~~~~~~----~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~l~~~~tg~~~g 156 (211)
T PRK11590 82 LEADFVRWFRDN----VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQMQRRYGGWVLT 156 (211)
T ss_pred HHHHHHHHHHHh----CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEEEEEEEccEECC
Confidence 777776666554 36799999999 57888999999999999999999999998632 333444431 100 0
Q ss_pred ---C-hHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEE
Q 018088 259 ---M-AHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVG 299 (361)
Q Consensus 259 ---K-P~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~ 299 (361)
. .+=...+.+.++.+...+.+.|||.+|+.|...+|-..+.
T Consensus 157 ~~c~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~v 201 (211)
T PRK11590 157 LRCLGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRV 201 (211)
T ss_pred ccCCChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEE
Confidence 0 1222333333466778899999999999999999987443
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=99.42 E-value=9.2e-13 Score=113.14 Aligned_cols=114 Identities=16% Similarity=0.192 Sum_probs=92.8
Q ss_pred HHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHH
Q 018088 211 WLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAA 290 (361)
Q Consensus 211 lL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA 290 (361)
.|+.|+++|++++|+||.+...+...++.+|+..+|+. ..+||+.+..+++++|+++++|+||||+.+|+.|+
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~~~~-------~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~ 108 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHLYQG-------QSNKLIAFSDILEKLALAPENVAYIGDDLIDWPVM 108 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEEEec-------ccchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHH
Confidence 68899999999999999999999999999999887763 25789999999999999999999999999999999
Q ss_pred HHcCCeEEEEeCCCCcccccCcceEeCChhh---hHHHHHHhhHhc
Q 018088 291 HNCTMMAVGLIGAHRAYDLVQADLAVANFNE---LSVINLRRLFAN 333 (361)
Q Consensus 291 ~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~E---L~~~ll~~l~~~ 333 (361)
+++|+. +++.... ......|++++.+..+ +..+....+.+|
T Consensus 109 ~~ag~~-~~v~~~~-~~~~~~a~~i~~~~~~~g~~~~~~~~~~~~~ 152 (154)
T TIGR01670 109 EKVGLS-VAVADAH-PLLIPRADYVTRIAGGRGAVREVCELLLLAQ 152 (154)
T ss_pred HHCCCe-EecCCcC-HHHHHhCCEEecCCCCCcHHHHHHHHHHHhh
Confidence 999998 6653332 2333468988887653 555555555444
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.40 E-value=1e-12 Score=114.23 Aligned_cols=95 Identities=12% Similarity=0.074 Sum_probs=80.6
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHH------------HHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHH
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRR------------KMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAV 268 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~------------~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~ 268 (361)
.++||+.++|+.|+++|++++|+||+... .+...++.+|+.. +.+++++....+| |+.+..+++
T Consensus 42 ~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~--~~ii~~~~~~~~KP~p~~~~~~~~ 119 (166)
T TIGR01664 42 FLYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI--QVLAATHAGLYRKPMTGMWEYLQS 119 (166)
T ss_pred EecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE--EEEEecCCCCCCCCccHHHHHHHH
Confidence 36899999999999999999999998653 4678899999843 5666666554445 579999999
Q ss_pred HcC--CCCCcEEEEcCCh--------HHHHHHHHcCCeEEE
Q 018088 269 KLD--RKPSKCVVFEDDP--------RAITAAHNCTMMAVG 299 (361)
Q Consensus 269 klg--i~p~~~v~IGDs~--------~Di~aA~~aG~~~v~ 299 (361)
++| ++|++|+||||+. +|+++|+++|+.+++
T Consensus 120 ~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~~~ 160 (166)
T TIGR01664 120 QYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEFKY 160 (166)
T ss_pred HcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCcCC
Confidence 999 9999999999986 699999999999875
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=2.4e-12 Score=113.79 Aligned_cols=108 Identities=16% Similarity=0.238 Sum_probs=87.6
Q ss_pred HHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHH
Q 018088 211 WLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAA 290 (361)
Q Consensus 211 lL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA 290 (361)
.++.|+++|++++|+||.....+...++.+|+..+|+ ....||+.+..+++++|+.|++|+||||+.+|+.++
T Consensus 56 ~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~f~-------g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a 128 (183)
T PRK09484 56 GIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHLYQ-------GQSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVM 128 (183)
T ss_pred HHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCceeec-------CCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHH
Confidence 4666778999999999999999999999999987775 235689999999999999999999999999999999
Q ss_pred HHcCCeEEEEeCCCCcccccCcceEeC------ChhhhHHHHH
Q 018088 291 HNCTMMAVGLIGAHRAYDLVQADLAVA------NFNELSVINL 327 (361)
Q Consensus 291 ~~aG~~~v~V~g~~~~~~l~~ad~vi~------sl~EL~~~ll 327 (361)
+++|+.++ + +.........+++++. .+.|+..+++
T Consensus 129 ~~aG~~~~-v-~~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~ 169 (183)
T PRK09484 129 EKVGLSVA-V-ADAHPLLLPRADYVTRIAGGRGAVREVCDLLL 169 (183)
T ss_pred HHCCCeEe-c-CChhHHHHHhCCEEecCCCCCCHHHHHHHHHH
Confidence 99999843 4 2222222346899996 5677665544
|
|
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=7.3e-12 Score=120.78 Aligned_cols=99 Identities=13% Similarity=0.106 Sum_probs=83.0
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCC---------------CHHHHHHHHHhCCCCcccceeE-e----cCCCCC--CC
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGL---------------DRRKMVEALERMGLLKYFQAIV-S----EEDGME--SM 259 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~---------------~~~~~~~~L~~lgl~~~Fd~iv-~----~e~~~~--~K 259 (361)
..++||+.++|+.|+++|++++|+||. ....+...++.+|+ +|+.++ + .++... ++
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl--~fd~i~i~~~~~sd~~~~rKP~ 106 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGI--KFDEVLICPHFPEDNCSCRKPK 106 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCC--ceeeEEEeCCcCcccCCCCCCC
Confidence 478999999999999999999999995 24556777888888 366654 3 244333 45
Q ss_pred hHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeC
Q 018088 260 AHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIG 302 (361)
Q Consensus 260 P~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g 302 (361)
|+++..++++++++|++++||||+.+|+++|+++|+.+|+|..
T Consensus 107 p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I~v~~ 149 (354)
T PRK05446 107 TGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGIRYAR 149 (354)
T ss_pred HHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEC
Confidence 6799999999999999999999999999999999999999843
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=3e-12 Score=121.56 Aligned_cols=99 Identities=12% Similarity=0.073 Sum_probs=89.6
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCc-ccceeEecC-------CCCCCC--hHHHHHHHHHcC
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLK-YFQAIVSEE-------DGMESM--AHRFLSAAVKLD 271 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~-~Fd~iv~~e-------~~~~~K--P~~~~~~~~klg 271 (361)
..++||+.++|+.|+++|++++++||.+.......++.+++.+ +|+.+++.+ +....| |+++..++++++
T Consensus 186 ~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~~ 265 (300)
T PHA02530 186 DKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEKI 265 (300)
T ss_pred CCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHHh
Confidence 3679999999999999999999999999999999999999987 999998887 233334 679999999999
Q ss_pred C-CCCcEEEEcCChHHHHHHHHcCCeEEEE
Q 018088 272 R-KPSKCVVFEDDPRAITAAHNCTMMAVGL 300 (361)
Q Consensus 272 i-~p~~~v~IGDs~~Di~aA~~aG~~~v~V 300 (361)
. .|++|+||||+.+|+.+|+++|+.+++|
T Consensus 266 ~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v 295 (300)
T PHA02530 266 APKYDVLLAVDDRDQVVDMWRRIGLECWQV 295 (300)
T ss_pred ccCceEEEEEcCcHHHHHHHHHhCCeEEEe
Confidence 8 6899999999999999999999999998
|
|
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.8e-12 Score=120.68 Aligned_cols=124 Identities=19% Similarity=0.213 Sum_probs=100.2
Q ss_pred CCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCC-----CCCChHHHHHHHHHcCCCCCcEE
Q 018088 204 PMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDG-----MESMAHRFLSAAVKLDRKPSKCV 278 (361)
Q Consensus 204 ~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~-----~~~KP~~~~~~~~klgi~p~~~v 278 (361)
.++++.+.++.|+..+++++++||.+.......+..+|+..+|+.+.+.... ++++|++|..++++++++|++|+
T Consensus 121 ~y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~ 200 (257)
T TIGR01458 121 SYQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVGPFVTALEYATDTKATVVGKPSKTFFLEALRATGCEPEEAV 200 (257)
T ss_pred CHHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCchHHHHHHHHHhCCCceeecCCCHHHHHHHHHHhCCChhhEE
Confidence 3678899999999999999999998877776666777888888866654332 34557899999999999999999
Q ss_pred EEcCCh-HHHHHHHHcCCeEEEE-eCCCCccc----ccCcceEeCChhhhHHHHH
Q 018088 279 VFEDDP-RAITAAHNCTMMAVGL-IGAHRAYD----LVQADLAVANFNELSVINL 327 (361)
Q Consensus 279 ~IGDs~-~Di~aA~~aG~~~v~V-~g~~~~~~----l~~ad~vi~sl~EL~~~ll 327 (361)
||||+. +|+.+|+++|+.+++| +|.+...+ ..+||++++++.|+..+++
T Consensus 201 ~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el~~~l~ 255 (257)
T TIGR01458 201 MIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHAVDLIL 255 (257)
T ss_pred EECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEECCHHHHHHHHh
Confidence 999996 8999999999999999 44333221 2368999999999987654
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=99.31 E-value=4.9e-12 Score=121.45 Aligned_cols=91 Identities=16% Similarity=0.142 Sum_probs=84.1
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHh----CCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEE
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALER----MGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCV 278 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~----lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v 278 (361)
.+++|+.++|+.|+++|+.++|+|++....+...++. +++.++|+.+..+ .++||+.+..+++++|+.+++||
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~~~~~~---~~pk~~~i~~~~~~l~i~~~~~v 107 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFDARSIN---WGPKSESLRKIAKKLNLGTDSFL 107 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHeeEEEEe---cCchHHHHHHHHHHhCCCcCcEE
Confidence 3589999999999999999999999999999999999 8999999988776 45899999999999999999999
Q ss_pred EEcCChHHHHHHHHcCCe
Q 018088 279 VFEDDPRAITAAHNCTMM 296 (361)
Q Consensus 279 ~IGDs~~Di~aA~~aG~~ 296 (361)
||||++.|+.++++++-.
T Consensus 108 fidD~~~d~~~~~~~lp~ 125 (320)
T TIGR01686 108 FIDDNPAERANVKITLPV 125 (320)
T ss_pred EECCCHHHHHHHHHHCCC
Confidence 999999999999997764
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.9e-12 Score=122.56 Aligned_cols=116 Identities=14% Similarity=0.078 Sum_probs=84.2
Q ss_pred HHHHHhhCCCcEEEEeCCCHHH-HHHHHHhCCCCcccceeEecCCCC-----CCChHHHHHHHHHcCCCCCcEEEEcCCh
Q 018088 211 WLDAVSSARIPCAVVSGLDRRK-MVEALERMGLLKYFQAIVSEEDGM-----ESMAHRFLSAAVKLDRKPSKCVVFEDDP 284 (361)
Q Consensus 211 lL~~L~~~Gi~vaivSn~~~~~-~~~~L~~lgl~~~Fd~iv~~e~~~-----~~KP~~~~~~~~klgi~p~~~v~IGDs~ 284 (361)
....|+.++-..+|+||.+... ....+...|+..+|+.+.+..... +++|++|..+++++++++++|+||||+.
T Consensus 178 a~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~ 257 (311)
T PLN02645 178 ATLCIRENPGCLFIATNRDAVTHLTDAQEWAGAGSMVGAIKGSTEREPLVVGKPSTFMMDYLANKFGIEKSQICMVGDRL 257 (311)
T ss_pred HHHHHhcCCCCEEEEeCCCCCCCCCCCCCccchHHHHHHHHHHhCCCcccCCCChHHHHHHHHHHcCCCcccEEEEcCCc
Confidence 3444544323577888876543 223334556666777776654422 3445799999999999999999999997
Q ss_pred -HHHHHHHHcCCeEEEE-eCCCCcccc------cCcceEeCChhhhHHHH
Q 018088 285 -RAITAAHNCTMMAVGL-IGAHRAYDL------VQADLAVANFNELSVIN 326 (361)
Q Consensus 285 -~Di~aA~~aG~~~v~V-~g~~~~~~l------~~ad~vi~sl~EL~~~l 326 (361)
+|+.+|+++|+.+++| +|.+...++ .+||++++++.+|..++
T Consensus 258 ~~Di~~A~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l~~~~ 307 (311)
T PLN02645 258 DTDILFGQNGGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDFLTLK 307 (311)
T ss_pred HHHHHHHHHcCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHHHHHh
Confidence 8999999999999999 666554432 35899999999987754
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=99.30 E-value=9.4e-11 Score=109.13 Aligned_cols=93 Identities=14% Similarity=0.212 Sum_probs=77.1
Q ss_pred CCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCccccee------EecCCCCCC----------Ch-HHH
Q 018088 201 VTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAI------VSEEDGMES----------MA-HRF 263 (361)
Q Consensus 201 ~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~i------v~~e~~~~~----------KP-~~~ 263 (361)
...+.||+.++++.|+++|++++|+|++....+...++++|+.+.+..+ ++.+....+ |. ..+
T Consensus 119 ~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v~ 198 (277)
T TIGR01544 119 DVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDVA 198 (277)
T ss_pred CCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHHH
Confidence 5688999999999999999999999999999999999999997666555 322222222 33 356
Q ss_pred HHHHHHcC--CCCCcEEEEcCChHHHHHHHHc
Q 018088 264 LSAAVKLD--RKPSKCVVFEDDPRAITAAHNC 293 (361)
Q Consensus 264 ~~~~~klg--i~p~~~v~IGDs~~Di~aA~~a 293 (361)
+.+++.++ +.+++||+||||.+|+.||.-+
T Consensus 199 ~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~ 230 (277)
T TIGR01544 199 LRNTEYFNQLKDRSNIILLGDSQGDLRMADGV 230 (277)
T ss_pred HHHHHHhCccCCcceEEEECcChhhhhHhcCC
Confidence 67889998 8999999999999999998776
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=6.6e-11 Score=110.48 Aligned_cols=115 Identities=12% Similarity=0.060 Sum_probs=77.2
Q ss_pred CccHHHHHHHHhhCCCcEEEEeCCC-----HHHHHHHHHhCCCCcccc--eeEecCCCCCCChHHHHHHHHHcCCCCCcE
Q 018088 205 MEGLQEWLDAVSSARIPCAVVSGLD-----RRKMVEALERMGLLKYFQ--AIVSEEDGMESMAHRFLSAAVKLDRKPSKC 277 (361)
Q Consensus 205 ~pgv~elL~~L~~~Gi~vaivSn~~-----~~~~~~~L~~lgl~~~Fd--~iv~~e~~~~~KP~~~~~~~~klgi~p~~~ 277 (361)
++++.++++.++..+..+.++++.. ........+.+++...+. ..+..-.....|+..+..+++++|+++++|
T Consensus 139 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~gi~~~e~ 218 (272)
T PRK10530 139 FTQVDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHVEHELGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQGWSMKNV 218 (272)
T ss_pred eEEcccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHHhhhcCceEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHe
Confidence 5667777777777666667776643 223334444455431111 111111223459999999999999999999
Q ss_pred EEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhh
Q 018088 278 VVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNE 321 (361)
Q Consensus 278 v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~E 321 (361)
++|||+.||++|++.+|+++++ ++........||+++.+-+|
T Consensus 219 i~~GD~~NDi~m~~~ag~~vam--gna~~~lk~~Ad~v~~~n~~ 260 (272)
T PRK10530 219 VAFGDNFNDISMLEAAGLGVAM--GNADDAVKARADLVIGDNTT 260 (272)
T ss_pred EEeCCChhhHHHHHhcCceEEe--cCchHHHHHhCCEEEecCCC
Confidence 9999999999999999986554 44443334568999887655
|
|
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=5.3e-11 Score=110.14 Aligned_cols=67 Identities=12% Similarity=0.184 Sum_probs=57.8
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEcCCh-HHHHHHHHcCCeEEEE-eCCCCcccc----cCcceEeCChhhhH
Q 018088 257 ESMAHRFLSAAVKLDRKPSKCVVFEDDP-RAITAAHNCTMMAVGL-IGAHRAYDL----VQADLAVANFNELS 323 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p~~~v~IGDs~-~Di~aA~~aG~~~v~V-~g~~~~~~l----~~ad~vi~sl~EL~ 323 (361)
+++|++|..++++++++|++|+||||+. .|+.+|+++|+.+++| +|.+...++ .++|++++++.|+.
T Consensus 174 KP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~el~ 246 (248)
T PRK10444 174 KPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDIDSMPFRPSWIYPSVADID 246 (248)
T ss_pred CCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHHhcCCCCCCEEECCHHHhh
Confidence 4456899999999999999999999997 7999999999999999 666655544 35999999999984
|
|
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.8e-10 Score=105.02 Aligned_cols=161 Identities=14% Similarity=0.109 Sum_probs=106.5
Q ss_pred EEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHH----HHHHHHccCCChHHHHHHHHHHHHHHH
Q 018088 121 GLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADH----VLHKVLLWGKEESELDRLNSRLTQLYY 195 (361)
Q Consensus 121 ~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~----~l~~~l~~~~~~~~~~~l~~~~~~~~~ 195 (361)
+|+||+| ||+|.... ..+.+.++.... ...+...+....... ++..+...+.+.+.+.+
T Consensus 2 LvvfDFD~TIvd~dsd-----~~v~~~l~~~~~-~~~l~~~~~~~~wt~~m~~vl~~L~~~gvt~~~I~~---------- 65 (234)
T PF06888_consen 2 LVVFDFDHTIVDQDSD-----DWVIELLPPEEL-PEELRESYPKGGWTEYMDRVLQLLHEQGVTPEDIRD---------- 65 (234)
T ss_pred EEEEeCCCCccCCccH-----HHHHHhcCCccc-HHHHHHhccccchHHHHHHHHHHHHHcCCCHHHHHH----------
Confidence 6899999 99987733 334455543321 112223332222222 33333333333332222
Q ss_pred HhcccCCCCCccHHHHHHHH--hhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCC----------------
Q 018088 196 DNLLSVTEPMEGLQEWLDAV--SSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGME---------------- 257 (361)
Q Consensus 196 ~~l~~~~~~~pgv~elL~~L--~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~---------------- 257 (361)
. ....++.||+.++++.+ ++.|+.++|+|++...+++..|+..|+...|+.|++......
T Consensus 66 -~-l~~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~ 143 (234)
T PF06888_consen 66 -A-LRSIPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDADGRLRVRPYHSHGCS 143 (234)
T ss_pred -H-HHcCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCCceEEEeCccCCCCC
Confidence 1 14558899999999999 457999999999999999999999999999998888632110
Q ss_pred C------ChHHHHHHHHH---cCCCCCcEEEEcCChHHHHHHHHcCCeEEE
Q 018088 258 S------MAHRFLSAAVK---LDRKPSKCVVFEDDPRAITAAHNCTMMAVG 299 (361)
Q Consensus 258 ~------KP~~~~~~~~k---lgi~p~~~v~IGDs~~Di~aA~~aG~~~v~ 299 (361)
. |-.++...... -|+.-++++|||||.||+-++.+.+-.-++
T Consensus 144 ~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v 194 (234)
T PF06888_consen 144 LCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVV 194 (234)
T ss_pred cCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEE
Confidence 0 22345555444 477889999999999999999987775333
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B | Back alignment and domain information |
|---|
Probab=99.22 E-value=3.8e-11 Score=90.29 Aligned_cols=67 Identities=24% Similarity=0.323 Sum_probs=57.9
Q ss_pred CCCChHHHHHHHHHcCCCCCcEEEEcCC-hHHHHHHHHcCCeEEEE-eCCCCcccc----cCcceEeCChhhh
Q 018088 256 MESMAHRFLSAAVKLDRKPSKCVVFEDD-PRAITAAHNCTMMAVGL-IGAHRAYDL----VQADLAVANFNEL 322 (361)
Q Consensus 256 ~~~KP~~~~~~~~klgi~p~~~v~IGDs-~~Di~aA~~aG~~~v~V-~g~~~~~~l----~~ad~vi~sl~EL 322 (361)
+++.|.+|..++++++++|++|+||||+ ..|+.+|+++|+.+|+| +|......+ ..||++++++.|+
T Consensus 3 gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e~ 75 (75)
T PF13242_consen 3 GKPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLKEA 75 (75)
T ss_dssp STTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESSGGGH
T ss_pred CCCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECCHHhC
Confidence 4566789999999999999999999999 78999999999999999 555555443 4799999999985
|
... |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.2e-10 Score=107.85 Aligned_cols=116 Identities=14% Similarity=0.094 Sum_probs=74.8
Q ss_pred CccHHHHHHHHhhCCCcEEEEeCCCHHHHHHH--H-HhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcCCCCCcEEE
Q 018088 205 MEGLQEWLDAVSSARIPCAVVSGLDRRKMVEA--L-ERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDRKPSKCVV 279 (361)
Q Consensus 205 ~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~--L-~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi~p~~~v~ 279 (361)
++.+...+..|+ +|.+ .++||.+....... + ..-.+...++...+.+.+..+| |++|..++++++++|++|+|
T Consensus 123 y~~l~~a~~~l~-~g~~-~i~tN~D~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~ 200 (249)
T TIGR01457 123 YEKFATATLAIR-KGAH-FIGTNGDLAIPTERGLLPGNGSLITVLEVATGVKPVYIGKPNAIIMEKAVEHLGTEREETLM 200 (249)
T ss_pred HHHHHHHHHHHH-CCCe-EEEECCCCCCCCCCCCCCCcHHHHHHHHHHhCCCccccCCChHHHHHHHHHHcCCCcccEEE
Confidence 444555555553 4555 66677544332110 0 0001112233334444443445 57999999999999999999
Q ss_pred EcCCh-HHHHHHHHcCCeEEEE-eCCCCcccc----cCcceEeCChhhh
Q 018088 280 FEDDP-RAITAAHNCTMMAVGL-IGAHRAYDL----VQADLAVANFNEL 322 (361)
Q Consensus 280 IGDs~-~Di~aA~~aG~~~v~V-~g~~~~~~l----~~ad~vi~sl~EL 322 (361)
|||+. .|+.+|+++|+.+++| +|.....+. ..+|++++++.++
T Consensus 201 VGD~~~~Di~~a~~~G~~~v~v~~G~~~~~~~~~~~~~pd~~v~~l~~~ 249 (249)
T TIGR01457 201 VGDNYLTDIRAGIDAGIDTLLVHTGVTKAEEVAGLPIAPTHVVSSLAEW 249 (249)
T ss_pred ECCCchhhHHHHHHcCCcEEEEcCCCCCHHHHhcCCCCCCEEeCChhhC
Confidence 99997 7999999999999999 554443333 3589999998874
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.18 E-value=3.7e-10 Score=113.55 Aligned_cols=94 Identities=11% Similarity=0.082 Sum_probs=77.2
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHH-HHHHHHHcCCCCCcEEEEc
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHR-FLSAAVKLDRKPSKCVVFE 281 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~-~~~~~~klgi~p~~~v~IG 281 (361)
+.+||+.+++++++++|++++++|++++..++..++++|+ ||.++++++....||+. ...+.+.++ .++++++|
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl---Fd~Vigsd~~~~~kg~~K~~~l~~~l~--~~~~~yvG 146 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL---FDGVFASDGTTNLKGAAKAAALVEAFG--ERGFDYAG 146 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC---CCEEEeCCCccccCCchHHHHHHHHhC--ccCeeEec
Confidence 5689999999999999999999999999999999999987 89999998876555431 122334454 35689999
Q ss_pred CChHHHHHHHHcCCeEEEEeC
Q 018088 282 DDPRAITAAHNCTMMAVGLIG 302 (361)
Q Consensus 282 Ds~~Di~aA~~aG~~~v~V~g 302 (361)
|+.+|+.+++.+| ..+.|++
T Consensus 147 DS~~Dlp~~~~A~-~av~Vn~ 166 (479)
T PRK08238 147 NSAADLPVWAAAR-RAIVVGA 166 (479)
T ss_pred CCHHHHHHHHhCC-CeEEECC
Confidence 9999999999999 5566643
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.6e-10 Score=97.96 Aligned_cols=90 Identities=20% Similarity=0.314 Sum_probs=80.8
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCCh--HHHHHHHHHcCCCCCcEEEE
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMA--HRFLSAAVKLDRKPSKCVVF 280 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP--~~~~~~~~klgi~p~~~v~I 280 (361)
...|.+++|+.+++.+|+++.|+||+....+....+.+|+. ++.. +.|| ..|.+++++++++|++|+||
T Consensus 46 ~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~----fi~~-----A~KP~~~~fr~Al~~m~l~~~~vvmV 116 (175)
T COG2179 46 DATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVP----FIYR-----AKKPFGRAFRRALKEMNLPPEEVVMV 116 (175)
T ss_pred CCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCc----eeec-----ccCccHHHHHHHHHHcCCChhHEEEE
Confidence 56888999999999999999999999999999999999984 3333 4676 58999999999999999999
Q ss_pred cCChH-HHHHHHHcCCeEEEEe
Q 018088 281 EDDPR-AITAAHNCTMMAVGLI 301 (361)
Q Consensus 281 GDs~~-Di~aA~~aG~~~v~V~ 301 (361)
||..- |+.+++.+||.+|.|.
T Consensus 117 GDqL~TDVlggnr~G~~tIlV~ 138 (175)
T COG2179 117 GDQLFTDVLGGNRAGMRTILVE 138 (175)
T ss_pred cchhhhhhhcccccCcEEEEEE
Confidence 99976 9999999999999983
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=2.2e-09 Score=97.76 Aligned_cols=96 Identities=13% Similarity=0.031 Sum_probs=67.6
Q ss_pred EEEEeCCCHHHHHHHHHhCCCCcccceeEe---cCCC--CCCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCe
Q 018088 222 CAVVSGLDRRKMVEALERMGLLKYFQAIVS---EEDG--MESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMM 296 (361)
Q Consensus 222 vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~---~e~~--~~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~ 296 (361)
+.+.++.....+...++.++.. +..+.+ .+.. ...|+..+..+++++|+++++|++|||+.||+.|++.+|++
T Consensus 118 ~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~ 195 (230)
T PRK01158 118 VALRRTVPVEEVRELLEELGLD--LEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFG 195 (230)
T ss_pred eeecccccHHHHHHHHHHcCCc--EEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCce
Confidence 4455555556667777766531 222111 1212 23589999999999999999999999999999999999998
Q ss_pred EEEEeCCCCcccccCcceEeCChhh
Q 018088 297 AVGLIGAHRAYDLVQADLAVANFNE 321 (361)
Q Consensus 297 ~v~V~g~~~~~~l~~ad~vi~sl~E 321 (361)
+++ ++........|++++.+..+
T Consensus 196 vam--~Na~~~vk~~a~~v~~~n~~ 218 (230)
T PRK01158 196 VAV--ANADEELKEAADYVTEKSYG 218 (230)
T ss_pred EEe--cCccHHHHHhcceEecCCCc
Confidence 766 44444444568998876554
|
|
| >COG4229 Predicted enolase-phosphatase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.3e-08 Score=87.30 Aligned_cols=119 Identities=13% Similarity=0.120 Sum_probs=96.5
Q ss_pred CCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhC---CCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcE
Q 018088 201 VTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERM---GLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKC 277 (361)
Q Consensus 201 ~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~l---gl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~ 277 (361)
...++|++.+.|++-++.|+++.|.|+++....+....+. +|..+|+..+....+.+..-.-|.+++...|++|.++
T Consensus 101 kahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs~agdL~~lfsGyfDttiG~KrE~~SY~kIa~~iGl~p~ei 180 (229)
T COG4229 101 KAHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHSDAGDLNSLFSGYFDTTIGKKRESQSYAKIAGDIGLPPAEI 180 (229)
T ss_pred ccccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcccccccHHhhhcceeeccccccccchhHHHHHHhcCCCchhe
Confidence 3478999999999999999999999999877777666553 5677888888886655556678999999999999999
Q ss_pred EEEcCChHHHHHHHHcCCeEEEEe--CCCCcccccCcceEeCChh
Q 018088 278 VVFEDDPRAITAAHNCTMMAVGLI--GAHRAYDLVQADLAVANFN 320 (361)
Q Consensus 278 v~IGDs~~Di~aA~~aG~~~v~V~--g~~~~~~l~~ad~vi~sl~ 320 (361)
+++.|.+..+.+|+.+||.++.+. |+++..+ .+-..++.+|.
T Consensus 181 lFLSDn~~EL~AA~~vGl~t~l~~R~g~~P~~d-~~~~~~~~sf~ 224 (229)
T COG4229 181 LFLSDNPEELKAAAGVGLATGLAVRPGNAPVPD-GQGFLVYKSFE 224 (229)
T ss_pred EEecCCHHHHHHHHhcchheeeeecCCCCCCCC-CcCceeeechh
Confidence 999999999999999999998773 3333222 34456666766
|
|
| >TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.5e-09 Score=104.19 Aligned_cols=102 Identities=10% Similarity=0.109 Sum_probs=86.1
Q ss_pred cCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhC-C-------CCcccceeEecCCCC---------------
Q 018088 200 SVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERM-G-------LLKYFQAIVSEEDGM--------------- 256 (361)
Q Consensus 200 ~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~l-g-------l~~~Fd~iv~~e~~~--------------- 256 (361)
..+.+.||+.++|+.|+++|++++|+||+...+++..++.+ | +.++||.++++..-+
T Consensus 181 ~yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~~ 260 (343)
T TIGR02244 181 KYVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDVE 260 (343)
T ss_pred HHhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeCC
Confidence 34567999999999999999999999999999999999996 7 899999999874311
Q ss_pred --CCC--------h-H-----HHHHHHHHcCCCCCcEEEEcCChH-HHHHHH-HcCCeEEEEe
Q 018088 257 --ESM--------A-H-----RFLSAAVKLDRKPSKCVVFEDDPR-AITAAH-NCTMMAVGLI 301 (361)
Q Consensus 257 --~~K--------P-~-----~~~~~~~klgi~p~~~v~IGDs~~-Di~aA~-~aG~~~v~V~ 301 (361)
..+ + . ......+.+|+.+++|++|||... |+..++ .+||.+++|.
T Consensus 261 ~g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~ 323 (343)
T TIGR02244 261 TGSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAII 323 (343)
T ss_pred CCcccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEEc
Confidence 001 1 1 357788889999999999999987 999998 9999999974
|
A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model. |
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.4e-08 Score=91.68 Aligned_cols=119 Identities=11% Similarity=0.146 Sum_probs=83.3
Q ss_pred cCCChHHHHHHHHHHHHHHHHhcccCCCCCccHHHHHH-HHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecC-
Q 018088 176 WGKEESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLD-AVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEE- 253 (361)
Q Consensus 176 ~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~pgv~elL~-~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e- 253 (361)
.+.+.++++++...+.+.+.+. ..++||+.+.|+ .++++|++++|+||++...++...+..++..- +.+++++
T Consensus 71 ~g~~~~~l~~~~~~f~~~~~~~----~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~-~~~i~t~l 145 (210)
T TIGR01545 71 FGHREAHLQDLEADFVAAFRDK----VTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR-LNLIASQI 145 (210)
T ss_pred cCCCHHHHHHHHHHHHHHHHHh----CCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc-CcEEEEEe
Confidence 4667777777777777666543 367999999996 78889999999999999999999988655332 2333432
Q ss_pred ---CCCC--C---C-hHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEE
Q 018088 254 ---DGME--S---M-AHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVG 299 (361)
Q Consensus 254 ---~~~~--~---K-P~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~ 299 (361)
+++. + . ++=...+.+.++.+...+.+.|||.+|+.|...||-..+.
T Consensus 146 e~~~gg~~~g~~c~g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~V 200 (210)
T TIGR01545 146 ERGNGGWVLPLRCLGHEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRV 200 (210)
T ss_pred EEeCCceEcCccCCChHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEE
Confidence 1111 0 0 1222233333455667889999999999999999987443
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=99.03 E-value=2.4e-10 Score=99.06 Aligned_cols=99 Identities=17% Similarity=0.140 Sum_probs=73.4
Q ss_pred CCCCCccHHHHHHHHhhCCCcEEEEe-CCCHHHHHHHHHhCCCC----------cccceeEecCCCCCCChHHHHHHHHH
Q 018088 201 VTEPMEGLQEWLDAVSSARIPCAVVS-GLDRRKMVEALERMGLL----------KYFQAIVSEEDGMESMAHRFLSAAVK 269 (361)
Q Consensus 201 ~~~~~pgv~elL~~L~~~Gi~vaivS-n~~~~~~~~~L~~lgl~----------~~Fd~iv~~e~~~~~KP~~~~~~~~k 269 (361)
...++|++.++|+.|+++|++++++| +...+.++.+|+.+++. ++|+..-. ....|-.-|..+.++
T Consensus 43 ~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~~eI---~~gsK~~Hf~~i~~~ 119 (169)
T PF12689_consen 43 EVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVPLIEYFDYLEI---YPGSKTTHFRRIHRK 119 (169)
T ss_dssp EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C----------CCECEEEE---SSS-HHHHHHHHHHH
T ss_pred EEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccccccchhhcchhhe---ecCchHHHHHHHHHh
Confidence 45789999999999999999999999 45678999999999999 78877322 234677889999999
Q ss_pred cCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeC
Q 018088 270 LDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIG 302 (361)
Q Consensus 270 lgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g 302 (361)
.|++.+++++|+|-..++...+..|+.++.|..
T Consensus 120 tgI~y~eMlFFDDe~~N~~~v~~lGV~~v~v~~ 152 (169)
T PF12689_consen 120 TGIPYEEMLFFDDESRNIEVVSKLGVTCVLVPD 152 (169)
T ss_dssp H---GGGEEEEES-HHHHHHHHTTT-EEEE-SS
T ss_pred cCCChhHEEEecCchhcceeeEecCcEEEEeCC
Confidence 999999999999999999999999999998854
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.4e-09 Score=111.49 Aligned_cols=114 Identities=14% Similarity=0.160 Sum_probs=90.8
Q ss_pred CCCCccHHHHHHHHhhCCC-cEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEE
Q 018088 202 TEPMEGLQEWLDAVSSARI-PCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVF 280 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi-~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~I 280 (361)
..++||+.+.|+.|+++|+ +++++||.+...+...++.+|+.++|..+. +..|++ ++++++..+++|+||
T Consensus 361 d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~~f~~~~-----p~~K~~----~i~~l~~~~~~v~~v 431 (536)
T TIGR01512 361 DEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDEVHAELL-----PEDKLE----IVKELREKYGPVAMV 431 (536)
T ss_pred ccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChhhhhccC-----cHHHHH----HHHHHHhcCCEEEEE
Confidence 4689999999999999999 999999999999999999999988875332 234444 555555566899999
Q ss_pred cCChHHHHHHHHcCCeEEEEeC-CCCcccccCcceEe--CChhhhHHHH
Q 018088 281 EDDPRAITAAHNCTMMAVGLIG-AHRAYDLVQADLAV--ANFNELSVIN 326 (361)
Q Consensus 281 GDs~~Di~aA~~aG~~~v~V~g-~~~~~~l~~ad~vi--~sl~EL~~~l 326 (361)
||+.||+.++++||+...+ | .........+|+++ +++.+|..++
T Consensus 432 GDg~nD~~al~~A~vgia~--g~~~~~~~~~~ad~vl~~~~l~~l~~~i 478 (536)
T TIGR01512 432 GDGINDAPALAAADVGIAM--GASGSDVAIETADVVLLNDDLSRLPQAI 478 (536)
T ss_pred eCCHHHHHHHHhCCEEEEe--CCCccHHHHHhCCEEEECCCHHHHHHHH
Confidence 9999999999999975443 4 23333445799999 8999997643
|
. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.5e-09 Score=111.76 Aligned_cols=114 Identities=14% Similarity=0.127 Sum_probs=89.0
Q ss_pred CCCCccHHHHHHHHhhCC-CcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEE
Q 018088 202 TEPMEGLQEWLDAVSSAR-IPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVF 280 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~G-i~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~I 280 (361)
..++||+.++|+.|+++| ++++++||.+...+...++++|+.++|+.+ .+..|++. +++++..+.+|+||
T Consensus 383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~~f~~~-----~p~~K~~~----v~~l~~~~~~v~~v 453 (556)
T TIGR01525 383 DQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDEVHAEL-----LPEDKLAI----VKELQEEGGVVAMV 453 (556)
T ss_pred ccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCeeeccC-----CHHHHHHH----HHHHHHcCCEEEEE
Confidence 468999999999999999 999999999999999999999998877643 12345554 44444467799999
Q ss_pred cCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeC--ChhhhHHHH
Q 018088 281 EDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVA--NFNELSVIN 326 (361)
Q Consensus 281 GDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~--sl~EL~~~l 326 (361)
||+.||+.++++||+.+.+ |.........||+++. ++..+..++
T Consensus 454 GDg~nD~~al~~A~vgia~--g~~~~~~~~~Ad~vi~~~~~~~l~~~i 499 (556)
T TIGR01525 454 GDGINDAPALAAADVGIAM--GAGSDVAIEAADIVLLNDDLSSLPTAI 499 (556)
T ss_pred ECChhHHHHHhhCCEeEEe--CCCCHHHHHhCCEEEeCCCHHHHHHHH
Confidence 9999999999999955443 4333333356999988 677776543
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=99.00 E-value=2.2e-09 Score=94.65 Aligned_cols=84 Identities=14% Similarity=0.155 Sum_probs=66.5
Q ss_pred ccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCccc--ceeEe------------cCCCCCCChHHHHHH---HH
Q 018088 206 EGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYF--QAIVS------------EEDGMESMAHRFLSA---AV 268 (361)
Q Consensus 206 pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~F--d~iv~------------~e~~~~~KP~~~~~~---~~ 268 (361)
|++.++|+.++++|++++|+|++....+..+++.+|+...+ ..-+. +.... .|...+..+ ..
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~-~K~~~l~~~~~~~~ 170 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNELFDNGGGIFTGRITGSNCG-GKAEALKELYIRDE 170 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEEECTTCCEEEEEEEEEEES-HHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEeeeecccceeeeeECCCCCC-cHHHHHHHHHHHhh
Confidence 66679999999999999999999999999999999987632 22111 00001 388877777 55
Q ss_pred HcCCCCCcEEEEcCChHHHHHHH
Q 018088 269 KLDRKPSKCVVFEDDPRAITAAH 291 (361)
Q Consensus 269 klgi~p~~~v~IGDs~~Di~aA~ 291 (361)
+ +.....+++||||.+|+.|++
T Consensus 171 ~-~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 171 E-DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp H-THTCCEEEEEESSGGGHHHHH
T ss_pred c-CCCCCeEEEEECCHHHHHHhC
Confidence 5 889999999999999999986
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.97 E-value=4.4e-10 Score=101.92 Aligned_cols=98 Identities=14% Similarity=0.001 Sum_probs=68.5
Q ss_pred EEEEeCCCHHHHHHHHHhCCCCccc-ceeEecCCC--CCCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEE
Q 018088 222 CAVVSGLDRRKMVEALERMGLLKYF-QAIVSEEDG--MESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAV 298 (361)
Q Consensus 222 vaivSn~~~~~~~~~L~~lgl~~~F-d~iv~~e~~--~~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v 298 (361)
..+.+......+...++.++....+ ......+.. ...|+..+.++++++|++++++++|||+.||+.|++.+|.+++
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~va 189 (225)
T TIGR01482 110 VKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDSENDIDLFEVPGFGVA 189 (225)
T ss_pred EEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHHHhcCceEE
Confidence 3455555666777777777653111 001111222 2458899999999999999999999999999999999999877
Q ss_pred EEeCCCCcccccCcceEeCChhh
Q 018088 299 GLIGAHRAYDLVQADLAVANFNE 321 (361)
Q Consensus 299 ~V~g~~~~~~l~~ad~vi~sl~E 321 (361)
+ ++........|++++.+..+
T Consensus 190 m--~Na~~~~k~~A~~vt~~~~~ 210 (225)
T TIGR01482 190 V--ANAQPELKEWADYVTESPYG 210 (225)
T ss_pred c--CChhHHHHHhcCeecCCCCC
Confidence 6 44445555678988876544
|
catalyze the same reaction as SPP. |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=98.95 E-value=1.9e-08 Score=93.56 Aligned_cols=86 Identities=16% Similarity=0.247 Sum_probs=69.6
Q ss_pred CCCCCccHHHHHHHHhhCCCcEEEEeCCC---HHHHHHHHHhCCCCccc-ceeEecCCCCCCChHHHHHHHHHcCCCCCc
Q 018088 201 VTEPMEGLQEWLDAVSSARIPCAVVSGLD---RRKMVEALERMGLLKYF-QAIVSEEDGMESMAHRFLSAAVKLDRKPSK 276 (361)
Q Consensus 201 ~~~~~pgv~elL~~L~~~Gi~vaivSn~~---~~~~~~~L~~lgl~~~F-d~iv~~e~~~~~KP~~~~~~~~klgi~p~~ 276 (361)
...++||+.++|+.|+++|++++++||.. +..+...|+.+|+..++ +.++..++ ...|+..+..+.+.+++
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr~~-~~~K~~rr~~I~~~y~I---- 190 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLKKD-KSSKESRRQKVQKDYEI---- 190 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeCCC-CCCcHHHHHHHHhcCCE----
Confidence 34789999999999999999999999976 34455778889997654 56666543 46789989888888887
Q ss_pred EEEEcCChHHHHHHH
Q 018088 277 CVVFEDDPRAITAAH 291 (361)
Q Consensus 277 ~v~IGDs~~Di~aA~ 291 (361)
+++|||..+|+..+.
T Consensus 191 vl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 191 VLLFGDNLLDFDDFF 205 (266)
T ss_pred EEEECCCHHHhhhhh
Confidence 899999999996643
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.93 E-value=5.6e-09 Score=107.62 Aligned_cols=113 Identities=15% Similarity=0.146 Sum_probs=86.7
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEc
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFE 281 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IG 281 (361)
.+++||+.++|+.|++.|++++++|+.....++..++.+|+. +| .+..+..|++.+. ++...+++|+|||
T Consensus 404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-~~-----~~~~p~~K~~~v~----~l~~~~~~v~~VG 473 (562)
T TIGR01511 404 DQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-VR-----AEVLPDDKAALIK----ELQEKGRVVAMVG 473 (562)
T ss_pred ccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-EE-----ccCChHHHHHHHH----HHHHcCCEEEEEe
Confidence 367999999999999999999999999999999999999995 22 2222334554444 4444678999999
Q ss_pred CChHHHHHHHHcCCeEEEEeCCCCcccccCcceEe--CChhhhHHHH
Q 018088 282 DDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAV--ANFNELSVIN 326 (361)
Q Consensus 282 Ds~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi--~sl~EL~~~l 326 (361)
|+.||+.++++||++..+ +.........+|+++ +++.++..++
T Consensus 474 Dg~nD~~al~~A~vgia~--g~g~~~a~~~Advvl~~~~l~~l~~~i 518 (562)
T TIGR01511 474 DGINDAPALAQADVGIAI--GAGTDVAIEAADVVLMRNDLNDVATAI 518 (562)
T ss_pred CCCccHHHHhhCCEEEEe--CCcCHHHHhhCCEEEeCCCHHHHHHHH
Confidence 999999999999976433 433333445689998 4888877654
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.92 E-value=4.9e-09 Score=97.37 Aligned_cols=69 Identities=22% Similarity=0.198 Sum_probs=58.5
Q ss_pred Ch--HHHHHHHHHcCCCCCcEEEEcCChH-HHHHHHHcCCeEEEE-eCCCCcccc----cCcceEeCChhhhHHHHH
Q 018088 259 MA--HRFLSAAVKLDRKPSKCVVFEDDPR-AITAAHNCTMMAVGL-IGAHRAYDL----VQADLAVANFNELSVINL 327 (361)
Q Consensus 259 KP--~~~~~~~~klgi~p~~~v~IGDs~~-Di~aA~~aG~~~v~V-~g~~~~~~l----~~ad~vi~sl~EL~~~ll 327 (361)
|| .+|..++++++..+++|+||||+.. ||.+|+++||.++.| +|.+..++. ..++++++++.++...+.
T Consensus 190 KP~~~i~~~al~~~~~~~~~~~mVGD~~~TDI~~a~~~G~~t~LV~TGv~~~~~~~~~~~~p~~v~~sl~~~~~~~~ 266 (269)
T COG0647 190 KPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSAEDLDRAEVKPTYVVDSLAELITALK 266 (269)
T ss_pred CCCHHHHHHHHHHhCCCcccEEEEcCCchhhHHHHHHcCCCEEEEccCCCChhhhhhhccCCcchHhhHHHHHhhhh
Confidence 55 4899999999999999999999987 999999999999999 666655543 358999999999886643
|
|
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.92 E-value=3.3e-08 Score=86.32 Aligned_cols=119 Identities=20% Similarity=0.194 Sum_probs=90.2
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCC---------------HHHHHHHHHhCCCCcccceeEecC-------CCCCCCh
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLD---------------RRKMVEALERMGLLKYFQAIVSEE-------DGMESMA 260 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~---------------~~~~~~~L~~lgl~~~Fd~iv~~e-------~~~~~KP 260 (361)
.+.||+.+.+..|++.|++++++||.+ ...+...|+..|+ .||.++..- +.-++||
T Consensus 31 ~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv--~id~i~~Cph~p~~~c~cRKP~~ 108 (181)
T COG0241 31 QFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGV--KIDGILYCPHHPEDNCDCRKPKP 108 (181)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCC--ccceEEECCCCCCCCCcccCCCh
Confidence 679999999999999999999999932 3335555666676 566666542 2223456
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEE-eCCCCcc-cccCcceEeCChhhhH
Q 018088 261 HRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGL-IGAHRAY-DLVQADLAVANFNELS 323 (361)
Q Consensus 261 ~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V-~g~~~~~-~l~~ad~vi~sl~EL~ 323 (361)
-.+..+++++++++++.++|||...|+++|.++|+..+.+ .+..... .....+++.+++.++.
T Consensus 109 gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (181)
T COG0241 109 GMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVLTGIGVTTDGAGRAKWVFDSLAEFA 173 (181)
T ss_pred HHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCCceEEEcCcccccccccccccccccHHHHH
Confidence 7999999999999999999999999999999999997665 3322211 1125678888888877
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=98.91 E-value=8.6e-10 Score=101.67 Aligned_cols=96 Identities=15% Similarity=0.185 Sum_probs=79.0
Q ss_pred CccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCccccee--EecCCCCCCC--hHHHHHHHHHcCCC-CCcEEE
Q 018088 205 MEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAI--VSEEDGMESM--AHRFLSAAVKLDRK-PSKCVV 279 (361)
Q Consensus 205 ~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~i--v~~e~~~~~K--P~~~~~~~~klgi~-p~~~v~ 279 (361)
++++.++++.|.++|+++ ++||.+..+....+..+|...+|+.+ .+.+....+| |+.|..++++++.. +++|+|
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g~~~~~i~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~~ 218 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAGYYAELIKQLGGKVIYSGKPYPAIFHKALKECSNIPKNRMLM 218 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEecccHHHHHHHHhCCcEecCCCCCHHHHHHHHHHcCCCCcccEEE
Confidence 789999999998899997 88999888777677777877777754 4554433445 67999999999975 679999
Q ss_pred EcCC-hHHHHHHHHcCCeEEEEe
Q 018088 280 FEDD-PRAITAAHNCTMMAVGLI 301 (361)
Q Consensus 280 IGDs-~~Di~aA~~aG~~~v~V~ 301 (361)
|||+ .+|+.+|+++|+.+++|.
T Consensus 219 vGD~~~~Di~~a~~~G~~~i~v~ 241 (242)
T TIGR01459 219 VGDSFYTDILGANRLGIDTALVL 241 (242)
T ss_pred ECCCcHHHHHHHHHCCCeEEEEe
Confidence 9999 589999999999999874
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.5e-08 Score=89.47 Aligned_cols=100 Identities=11% Similarity=0.105 Sum_probs=75.1
Q ss_pred CCCCCccHHHHHHHHhhCC-CcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCC-----------------CChH-
Q 018088 201 VTEPMEGLQEWLDAVSSAR-IPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGME-----------------SMAH- 261 (361)
Q Consensus 201 ~~~~~pgv~elL~~L~~~G-i~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~-----------------~KP~- 261 (361)
..+..||+.++++.+++.| +.+.|+|.++..+++..|+.+|+.+.|+.|++...... .-|.
T Consensus 82 ~iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~CPsN 161 (256)
T KOG3120|consen 82 SIPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNLCPSN 161 (256)
T ss_pred cCCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCcCchh
Confidence 4588999999999999998 59999999999999999999999999998887642110 0121
Q ss_pred -----HHHH---HHHHcCCCCCcEEEEcCChHHHHHHHHcCC-eEEEE
Q 018088 262 -----RFLS---AAVKLDRKPSKCVVFEDDPRAITAAHNCTM-MAVGL 300 (361)
Q Consensus 262 -----~~~~---~~~klgi~p~~~v~IGDs~~Di~aA~~aG~-~~v~V 300 (361)
.+.+ -..+-|+.-++.+|+||+.||+........ ..++-
T Consensus 162 mCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~amp 209 (256)
T KOG3120|consen 162 MCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMP 209 (256)
T ss_pred hhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecc
Confidence 2222 223347778899999999999776665544 44443
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.3e-09 Score=98.43 Aligned_cols=99 Identities=13% Similarity=-0.006 Sum_probs=70.4
Q ss_pred cEEEEeCCCHHHHHHHHHhCCCCcccce-eEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEE
Q 018088 221 PCAVVSGLDRRKMVEALERMGLLKYFQA-IVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVG 299 (361)
Q Consensus 221 ~vaivSn~~~~~~~~~L~~lgl~~~Fd~-iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~ 299 (361)
.++++++.....+...++..++..++.. .+..-.....|...+..+++++|++++++++|||+.||+.|++.+|+.+++
T Consensus 109 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~ag~~vam 188 (215)
T TIGR01487 109 LVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFKVAV 188 (215)
T ss_pred EEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCeEEc
Confidence 3445566666777777777766443221 111112234688999999999999999999999999999999999999777
Q ss_pred EeCCCCcccccCcceEeCChhh
Q 018088 300 LIGAHRAYDLVQADLAVANFNE 321 (361)
Q Consensus 300 V~g~~~~~~l~~ad~vi~sl~E 321 (361)
++..+.....|++++.+-.+
T Consensus 189 --~na~~~~k~~A~~v~~~~~~ 208 (215)
T TIGR01487 189 --ANADDQLKEIADYVTSNPYG 208 (215)
T ss_pred --CCccHHHHHhCCEEcCCCCC
Confidence 34444444568888875443
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=98.87 E-value=2.6e-08 Score=86.12 Aligned_cols=91 Identities=13% Similarity=0.134 Sum_probs=69.9
Q ss_pred CCccHHHHHHHHhhCCCc--EEEEeCC-------CHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCC--
Q 018088 204 PMEGLQEWLDAVSSARIP--CAVVSGL-------DRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDR-- 272 (361)
Q Consensus 204 ~~pgv~elL~~L~~~Gi~--vaivSn~-------~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi-- 272 (361)
+.|.+.+++++|++.+.. ++||||+ ....++..-+.+|+. .+... ..||..+..+.+.++.
T Consensus 60 i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp----vl~h~----~kKP~~~~~i~~~~~~~~ 131 (168)
T PF09419_consen 60 IPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIP----VLRHR----AKKPGCFREILKYFKCQK 131 (168)
T ss_pred CCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCc----EEEeC----CCCCccHHHHHHHHhhcc
Confidence 355566778888887654 9999997 366677777888863 22222 4689878788877764
Q ss_pred ---CCCcEEEEcCChH-HHHHHHHcCCeEEEEeC
Q 018088 273 ---KPSKCVVFEDDPR-AITAAHNCTMMAVGLIG 302 (361)
Q Consensus 273 ---~p~~~v~IGDs~~-Di~aA~~aG~~~v~V~g 302 (361)
.|+++++|||-.- |+.+|...|+.+|+|..
T Consensus 132 ~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~~ 165 (168)
T PF09419_consen 132 VVTSPSEIAVIGDRLFTDVLMGNRMGSYTILVTD 165 (168)
T ss_pred CCCCchhEEEEcchHHHHHHHhhccCceEEEEec
Confidence 4999999999986 99999999999999853
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.86 E-value=2.8e-08 Score=93.23 Aligned_cols=82 Identities=15% Similarity=0.202 Sum_probs=57.5
Q ss_pred HHhhCCCcEEEE---eCCCHHHHHHHHHhCCCC----cccceeEecCCCCCCChHHHHHHHHHcCCCC-CcEEEEcCChH
Q 018088 214 AVSSARIPCAVV---SGLDRRKMVEALERMGLL----KYFQAIVSEEDGMESMAHRFLSAAVKLDRKP-SKCVVFEDDPR 285 (361)
Q Consensus 214 ~L~~~Gi~vaiv---Sn~~~~~~~~~L~~lgl~----~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p-~~~v~IGDs~~ 285 (361)
.++..++..+++ +......+...++..++. .+|..++.. . .|...+.++++.+|+++ ++|++|||+.|
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~---~-~Kg~al~~l~~~~~i~~~~~v~~~GDs~N 218 (273)
T PRK00192 143 LAKDREFSEPFLWNGSEAAKERFEEALKRLGLKVTRGGRFLHLLGG---G-DKGKAVRWLKELYRRQDGVETIALGDSPN 218 (273)
T ss_pred HHHhcccCCceeecCchHHHHHHHHHHHHcCCEEEECCeEEEEeCC---C-CHHHHHHHHHHHHhccCCceEEEEcCChh
Confidence 344555555555 433344455555555553 222222222 3 67889999999999999 99999999999
Q ss_pred HHHHHHHcCCeEEE
Q 018088 286 AITAAHNCTMMAVG 299 (361)
Q Consensus 286 Di~aA~~aG~~~v~ 299 (361)
|+.|++.+|.++++
T Consensus 219 Di~m~~~ag~~vam 232 (273)
T PRK00192 219 DLPMLEAADIAVVV 232 (273)
T ss_pred hHHHHHhCCeeEEe
Confidence 99999999999887
|
|
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=98.80 E-value=2.2e-09 Score=92.90 Aligned_cols=99 Identities=10% Similarity=0.112 Sum_probs=88.0
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCc-ccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEE
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLK-YFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVF 280 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~-~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~I 280 (361)
+...||+.++|+.|.+. ++++|.|++.+.++..+++.++... +|+.+++.+.....++. +.+.+.++|.++++||+|
T Consensus 41 v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~~f~~~l~r~~~~~~~~~-~~K~L~~l~~~~~~vIiV 118 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGKVISRRLYRESCVFTNGK-YVKDLSLVGKDLSKVIII 118 (162)
T ss_pred EEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCCEEeEEEEccccEEeCCC-EEeEchhcCCChhhEEEE
Confidence 36799999999999988 9999999999999999999999876 89999998887666665 677788899999999999
Q ss_pred cCChHHHHHHHHcCCeEEEEeC
Q 018088 281 EDDPRAITAAHNCTMMAVGLIG 302 (361)
Q Consensus 281 GDs~~Di~aA~~aG~~~v~V~g 302 (361)
||++.++.++..+|+.+....|
T Consensus 119 DD~~~~~~~~~~NgI~i~~f~~ 140 (162)
T TIGR02251 119 DNSPYSYSLQPDNAIPIKSWFG 140 (162)
T ss_pred eCChhhhccCccCEeecCCCCC
Confidence 9999999999999988776544
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.1e-07 Score=91.44 Aligned_cols=69 Identities=16% Similarity=0.087 Sum_probs=53.2
Q ss_pred CCh--HHHHHHHHHc--------CC-----CCCcEEEEcCCh-HHHHHHHHcCCeEEEE-eCCCCcccc---cCcceEeC
Q 018088 258 SMA--HRFLSAAVKL--------DR-----KPSKCVVFEDDP-RAITAAHNCTMMAVGL-IGAHRAYDL---VQADLAVA 317 (361)
Q Consensus 258 ~KP--~~~~~~~~kl--------gi-----~p~~~v~IGDs~-~Di~aA~~aG~~~v~V-~g~~~~~~l---~~ad~vi~ 317 (361)
+|| ..|..+++.+ ++ ++++++||||++ .|+.+|+++|+.+++| +|.....+. ..++++++
T Consensus 232 GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~~~~~~~~~~~~p~~vv~ 311 (321)
T TIGR01456 232 GKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTGVYNGGDDLKECKPTLIVN 311 (321)
T ss_pred CCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEecccccCCCCCCCCCCCCEEEC
Confidence 465 5788877777 43 457999999998 6999999999999999 443333222 25899999
Q ss_pred ChhhhHHHH
Q 018088 318 NFNELSVIN 326 (361)
Q Consensus 318 sl~EL~~~l 326 (361)
++.|+...+
T Consensus 312 ~l~e~~~~i 320 (321)
T TIGR01456 312 DVFDAVTKI 320 (321)
T ss_pred CHHHHHHHh
Confidence 999998765
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=98.78 E-value=1.7e-08 Score=102.24 Aligned_cols=90 Identities=10% Similarity=0.169 Sum_probs=77.3
Q ss_pred CCccHHHHHHHHhhCCCcEEEEeCCCH------------HHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHH
Q 018088 204 PMEGLQEWLDAVSSARIPCAVVSGLDR------------RKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVK 269 (361)
Q Consensus 204 ~~pgv~elL~~L~~~Gi~vaivSn~~~------------~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~k 269 (361)
++||+.+.|+.|++.|++++|+||... ..+..+++.+|+ .|+.+++.+....+| |.++..++++
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgi--pfdviia~~~~~~RKP~pGm~~~a~~~ 275 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGV--PFQVFIAIGAGFYRKPLTGMWDHLKEE 275 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCC--ceEEEEeCCCCCCCCCCHHHHHHHHHh
Confidence 589999999999999999999999655 457888899998 489888887766666 4699999999
Q ss_pred cC----CCCCcEEEEcCChHHHHHHHHcCC
Q 018088 270 LD----RKPSKCVVFEDDPRAITAAHNCTM 295 (361)
Q Consensus 270 lg----i~p~~~v~IGDs~~Di~aA~~aG~ 295 (361)
++ +++++++||||+..|+.+++++|.
T Consensus 276 ~~~~~~Id~~~S~~VGDaagr~~~g~~ag~ 305 (526)
T TIGR01663 276 ANDGTEIQEDDCFFVGDAAGRPANGKAAGK 305 (526)
T ss_pred cCcccCCCHHHeEEeCCcccchHHHHhcCC
Confidence 85 899999999999989888777775
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.76 E-value=5.9e-09 Score=97.15 Aligned_cols=63 Identities=17% Similarity=0.070 Sum_probs=51.5
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhh
Q 018088 257 ESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNE 321 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~E 321 (361)
..|...+..+++++|+++++|++|||+.||++|.+.+|.++++ ++..+.....|+++..+-++
T Consensus 188 ~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam--~Na~~~~k~~A~~vt~~n~~ 250 (264)
T COG0561 188 VSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAM--GNADEELKELADYVTTSNDE 250 (264)
T ss_pred CchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeec--cCCCHHHHhhCCcccCCccc
Confidence 3488899999999999999999999999999999999999777 45544445567766565544
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.73 E-value=7.1e-09 Score=97.08 Aligned_cols=63 Identities=8% Similarity=0.017 Sum_probs=51.2
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcce--EeCChhh
Q 018088 257 ESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADL--AVANFNE 321 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~--vi~sl~E 321 (361)
..|...+..+++.+|+++++|++|||+.||++|.+.+|.+.++ ++........|++ ++.+.+|
T Consensus 187 ~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm--~Na~~~vK~~A~~~~v~~~n~e 251 (272)
T PRK15126 187 CNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIM--GNAMPQLRAELPHLPVIGHCRN 251 (272)
T ss_pred CChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceec--cCChHHHHHhCCCCeecCCCcc
Confidence 4589999999999999999999999999999999999998777 4444555556664 6655444
|
|
| >KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.73 E-value=4.9e-08 Score=90.43 Aligned_cols=68 Identities=18% Similarity=0.226 Sum_probs=55.1
Q ss_pred CCh--HHHHHHHHHcCCCCCcEEEEcCChH-HHHHHHHcCCeEEEE-eCCCCccc--------ccCcceEeCChhhhHHH
Q 018088 258 SMA--HRFLSAAVKLDRKPSKCVVFEDDPR-AITAAHNCTMMAVGL-IGAHRAYD--------LVQADLAVANFNELSVI 325 (361)
Q Consensus 258 ~KP--~~~~~~~~klgi~p~~~v~IGDs~~-Di~aA~~aG~~~v~V-~g~~~~~~--------l~~ad~vi~sl~EL~~~ 325 (361)
+|| .++..+.+++++.|++|+||||+.+ ||.-++++|+++++| +|.+..++ ...||++++++.++...
T Consensus 223 GKP~~~m~~~l~~~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~led~~~~~~~~~~~PDyy~~~l~d~~~~ 302 (306)
T KOG2882|consen 223 GKPSTFMFEYLLEKFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVTTLEDILEAQGDNKMVPDYYADSLGDLLPL 302 (306)
T ss_pred CCCCHHHHHHHHHHcCCCcceEEEEcccchhhhhHhhccCcceEEEecCcCcHHHHHhcccccCCCCchHHhhHHHHhhh
Confidence 355 4889999999999999999999998 999999999999988 55553222 12488988888887654
|
|
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.73 E-value=4.8e-08 Score=105.28 Aligned_cols=114 Identities=10% Similarity=0.045 Sum_probs=90.5
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcC
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFED 282 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGD 282 (361)
+++||+.+.|+.|++.|++++++|+.....+....+.+|+.++|..+ .|+.-..++++++..+++|+||||
T Consensus 650 ~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~~~~~~---------~p~~K~~~i~~l~~~~~~v~~vGD 720 (834)
T PRK10671 650 PLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDEVIAGV---------LPDGKAEAIKRLQSQGRQVAMVGD 720 (834)
T ss_pred cchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCEEEeCC---------CHHHHHHHHHHHhhcCCEEEEEeC
Confidence 67999999999999999999999999999999999999997655432 244444566677777889999999
Q ss_pred ChHHHHHHHHcCCeEEEEeCCCCcccccCcc--eEeCChhhhHHHHH
Q 018088 283 DPRAITAAHNCTMMAVGLIGAHRAYDLVQAD--LAVANFNELSVINL 327 (361)
Q Consensus 283 s~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad--~vi~sl~EL~~~ll 327 (361)
+.||+.++++||++..+ |.+.......+| +..+++.++..++.
T Consensus 721 g~nD~~al~~Agvgia~--g~g~~~a~~~ad~vl~~~~~~~i~~~i~ 765 (834)
T PRK10671 721 GINDAPALAQADVGIAM--GGGSDVAIETAAITLMRHSLMGVADALA 765 (834)
T ss_pred CHHHHHHHHhCCeeEEe--cCCCHHHHHhCCEEEecCCHHHHHHHHH
Confidence 99999999999996554 444444444455 45578888887665
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.71 E-value=5.6e-08 Score=90.75 Aligned_cols=63 Identities=16% Similarity=0.058 Sum_probs=54.2
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhh
Q 018088 257 ESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNE 321 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~E 321 (361)
..|...+..+++.+|++++++++|||+.||++|.+.+|.++++ ++..+.....|++++.+.++
T Consensus 195 vsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm--~NA~~~vK~~A~~vt~~n~~ 257 (270)
T PRK10513 195 VNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAM--GNAIPSVKEVAQFVTKSNLE 257 (270)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEe--cCccHHHHHhcCeeccCCCc
Confidence 4589999999999999999999999999999999999998777 55555556679999876544
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=98.70 E-value=3.1e-08 Score=91.30 Aligned_cols=92 Identities=15% Similarity=0.194 Sum_probs=77.8
Q ss_pred CCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHH--HHHHhCCCCc-ccceeEecCCCCCCChHHHHHHHHHcCCCCCcE
Q 018088 201 VTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMV--EALERMGLLK-YFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKC 277 (361)
Q Consensus 201 ~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~--~~L~~lgl~~-~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~ 277 (361)
...++||+.++|+.|+++|++++++||+.+.... ..++.+|+.. +|+.+++++++. .+.+..+++++++.|++|
T Consensus 22 ~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~~~---~~~l~~~~~~~~~~~~~~ 98 (242)
T TIGR01459 22 GNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSGEIA---VQMILESKKRFDIRNGII 98 (242)
T ss_pred CCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccHHHH---HHHHHhhhhhccCCCceE
Confidence 3478999999999999999999999998877655 7889999998 999999986532 256777788899999999
Q ss_pred EEEcCChHHHHHHHHcCC
Q 018088 278 VVFEDDPRAITAAHNCTM 295 (361)
Q Consensus 278 v~IGDs~~Di~aA~~aG~ 295 (361)
++|||+..|+.....+|.
T Consensus 99 ~~vGd~~~d~~~~~~~~~ 116 (242)
T TIGR01459 99 YLLGHLENDIINLMQCYT 116 (242)
T ss_pred EEeCCcccchhhhcCCCc
Confidence 999999999887765554
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=98.69 E-value=1e-07 Score=87.63 Aligned_cols=45 Identities=18% Similarity=0.242 Sum_probs=40.7
Q ss_pred CCChHHHHHHHHHcCCCCCcE-EEEcCCh-HHHHHHHHcCCeEEEEe
Q 018088 257 ESMAHRFLSAAVKLDRKPSKC-VVFEDDP-RAITAAHNCTMMAVGLI 301 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p~~~-v~IGDs~-~Di~aA~~aG~~~v~V~ 301 (361)
+++|+.|..+++++++.++++ +||||+. .|+.+|+++|+.+++|.
T Consensus 188 KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~ 234 (236)
T TIGR01460 188 KPSPAIYRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLLVL 234 (236)
T ss_pred CCCHHHHHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEEEe
Confidence 455789999999999999887 9999998 79999999999999983
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.67 E-value=1.5e-07 Score=76.64 Aligned_cols=121 Identities=12% Similarity=0.141 Sum_probs=95.4
Q ss_pred cCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEE
Q 018088 200 SVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVV 279 (361)
Q Consensus 200 ~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~ 279 (361)
...++++.+.+.+++|++. +.++|+|+...-.+.+.++..|+. .+.++.+ ..|+.-..++..++-+-+.|+|
T Consensus 27 tgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~--~~rv~a~-----a~~e~K~~ii~eLkk~~~k~vm 98 (152)
T COG4087 27 TGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIP--VERVFAG-----ADPEMKAKIIRELKKRYEKVVM 98 (152)
T ss_pred cCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCc--eeeeecc-----cCHHHHHHHHHHhcCCCcEEEE
Confidence 3457899999999999999 999999999989999999999873 2344443 3366666677777777789999
Q ss_pred EcCChHHHHHHHHcCCeEEEEeCC-CCcccccCcceEeCChhhhHHHHHH
Q 018088 280 FEDDPRAITAAHNCTMMAVGLIGA-HRAYDLVQADLAVANFNELSVINLR 328 (361)
Q Consensus 280 IGDs~~Di~aA~~aG~~~v~V~g~-~~~~~l~~ad~vi~sl~EL~~~ll~ 328 (361)
|||+.||+.|.++|-++.+-+... .+...+..||+++.+..|+.+++.+
T Consensus 99 VGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl~~~ 148 (152)
T COG4087 99 VGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKEIAEILDLLKD 148 (152)
T ss_pred ecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHHHHHHHhhc
Confidence 999999999999998876555333 3344456799999999999887543
|
|
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.67 E-value=9.3e-08 Score=103.57 Aligned_cols=123 Identities=14% Similarity=0.149 Sum_probs=97.0
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCC------------------CChHHHH
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGME------------------SMAHRFL 264 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~------------------~KP~~~~ 264 (361)
+++||+.+.++.|++.|++++++||.....+....+.+|+...++.++++++... ..|+--.
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K~ 607 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHKM 607 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHHH
Confidence 6799999999999999999999999999999999999999887777766654321 3476556
Q ss_pred HHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCC-CCcccccCcceEe--CChhhhHHHHH
Q 018088 265 SAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGA-HRAYDLVQADLAV--ANFNELSVINL 327 (361)
Q Consensus 265 ~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~-~~~~~l~~ad~vi--~sl~EL~~~ll 327 (361)
.+.+.++...+.|.|+||+.||+.|+++|+++..+ |. +..-....||+++ +++..+...+.
T Consensus 608 ~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~--g~~g~~va~~aaDivl~dd~~~~i~~~i~ 671 (884)
T TIGR01522 608 KIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAM--GQTGTDVAKEAADMILTDDDFATILSAIE 671 (884)
T ss_pred HHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEec--CCCcCHHHHHhcCEEEcCCCHHHHHHHHH
Confidence 66666666668899999999999999999976444 32 2223335689999 66888876544
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.67 E-value=6.6e-08 Score=84.73 Aligned_cols=74 Identities=24% Similarity=0.331 Sum_probs=62.3
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEcCChH-HHHHHHHcCCeEEEE-eCCCCccccc----CcceEeCChhhhHHHHHHhh
Q 018088 257 ESMAHRFLSAAVKLDRKPSKCVVFEDDPR-AITAAHNCTMMAVGL-IGAHRAYDLV----QADLAVANFNELSVINLRRL 330 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p~~~v~IGDs~~-Di~aA~~aG~~~v~V-~g~~~~~~l~----~ad~vi~sl~EL~~~ll~~l 330 (361)
++.|..|..++..+|++|+++|||||..+ |+..|..+||..|.| +|...+.+.. .||.++++|.+-..++++..
T Consensus 181 KP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVkTGK~rpsDe~k~~~~p~~~~d~f~~AVd~I~q~~ 260 (262)
T KOG3040|consen 181 KPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGILVKTGKFRPSDEEKPPVPPDLTADNFADAVDLIIQNG 260 (262)
T ss_pred CCCHHHHHHHHHhcCCChHHheEEccccccchhhHhhhcceeEEeeccccCCcccccCCCCcchhhhhHHHHHHHHHhhc
Confidence 34456899999999999999999999998 899999999999999 6766653332 47899999999988887654
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.67 E-value=2.1e-08 Score=102.83 Aligned_cols=63 Identities=13% Similarity=0.050 Sum_probs=54.5
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhh
Q 018088 257 ESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNE 321 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~E 321 (361)
..|...+..+++.+|+++++|++|||+.||++|.+.||.++++ +++.......||+++.+.+|
T Consensus 506 vSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAM--gNA~eeVK~~Ad~VT~sNdE 568 (580)
T PLN02887 506 TSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVAL--SNGAEKTKAVADVIGVSNDE 568 (580)
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEe--CCCCHHHHHhCCEEeCCCCc
Confidence 4589999999999999999999999999999999999998777 55555556679999876554
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.56 E-value=1.6e-07 Score=87.95 Aligned_cols=63 Identities=10% Similarity=-0.002 Sum_probs=49.1
Q ss_pred CCChHHHHHHHHHcCC---CCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCc-ccc----cCcceEeCChh
Q 018088 257 ESMAHRFLSAAVKLDR---KPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRA-YDL----VQADLAVANFN 320 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi---~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~-~~l----~~ad~vi~sl~ 320 (361)
..|...+..+++.+|+ +++++++|||+.||++|.+.+|.++++ .+.... ..+ ..++++.+..+
T Consensus 186 ~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM-~~~~~~~~~l~~~~~~~~~~~~~~~ 256 (271)
T PRK03669 186 AGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVV-KGLNREGVHLQDDDPARVYRTQREG 256 (271)
T ss_pred CCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEe-cCCCCCCcccccccCCceEeccCCC
Confidence 4588999999999999 999999999999999999999988766 222212 122 25777777655
|
|
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=3.6e-07 Score=81.07 Aligned_cols=100 Identities=13% Similarity=0.106 Sum_probs=76.4
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCH---------------HHHHHHHHhCCCCcccceeEecCC-----------CC
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDR---------------RKMVEALERMGLLKYFQAIVSEED-----------GM 256 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~---------------~~~~~~L~~lgl~~~Fd~iv~~e~-----------~~ 256 (361)
.+.|.+..|+.+|++.|++++|||=++. +.+...|+.-+-..-...+++... .+
T Consensus 75 ~~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~p~~y~~~g 154 (219)
T PTZ00445 75 SVTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFWQEPSDYRPLG 154 (219)
T ss_pred cCCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHhcCccceeeeeeeeCCcccCChhhhhhhc
Confidence 4688899999999999999999996654 356777776544333333433211 11
Q ss_pred CCCh--HH--H--HHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeC
Q 018088 257 ESMA--HR--F--LSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIG 302 (361)
Q Consensus 257 ~~KP--~~--~--~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g 302 (361)
..|| ++ | ..+++++|+.|++|++|+|...++++|++.|+.++.+.+
T Consensus 155 l~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi~ai~f~~ 206 (219)
T PTZ00445 155 LDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNALKEGYIALHVTG 206 (219)
T ss_pred ccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCCEEEEcCC
Confidence 2254 46 7 999999999999999999999999999999999998754
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.56 E-value=5.1e-08 Score=81.85 Aligned_cols=97 Identities=15% Similarity=0.219 Sum_probs=79.0
Q ss_pred HHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHH
Q 018088 212 LDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAH 291 (361)
Q Consensus 212 L~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~ 291 (361)
++.|.+.|++++|+|+.....++...+.+|+..+|..+ ..|-..|..+++++++.+++|.++||..+|+.+.+
T Consensus 44 ik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~~~qG~-------~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~ 116 (170)
T COG1778 44 IKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKHLYQGI-------SDKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVME 116 (170)
T ss_pred HHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCceeeech-------HhHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHH
Confidence 56678899999999999999999999999997666433 35778999999999999999999999999999999
Q ss_pred HcCCeEEEEeCCCCcccccCcceEeC
Q 018088 292 NCTMMAVGLIGAHRAYDLVQADLAVA 317 (361)
Q Consensus 292 ~aG~~~v~V~g~~~~~~l~~ad~vi~ 317 (361)
++|.+++. . ...+.....++++.+
T Consensus 117 ~vGls~a~-~-dAh~~v~~~a~~Vt~ 140 (170)
T COG1778 117 KVGLSVAV-A-DAHPLLKQRADYVTS 140 (170)
T ss_pred HcCCcccc-c-ccCHHHHHhhHhhhh
Confidence 99998554 1 222333345666654
|
|
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=98.54 E-value=2.6e-07 Score=86.20 Aligned_cols=56 Identities=21% Similarity=0.256 Sum_probs=52.0
Q ss_pred CccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCCh
Q 018088 205 MEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMA 260 (361)
Q Consensus 205 ~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP 260 (361)
-||+.++|++|+++|++++|+|++.+..+...++.+|+..+|+.++++++....||
T Consensus 148 dPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~~~kp 203 (301)
T TIGR01684 148 DPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKAEEYS 203 (301)
T ss_pred CHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCccccCCC
Confidence 48899999999999999999999999999999999999999999999988776665
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.52 E-value=1.1e-07 Score=88.08 Aligned_cols=63 Identities=19% Similarity=0.074 Sum_probs=51.8
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhh
Q 018088 257 ESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNE 321 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~E 321 (361)
..|...+..+++.+|+++++|++|||+.||+.|++.+|+.+++ ++........|++++.+.++
T Consensus 187 ~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~--~na~~~~k~~a~~~~~~n~~ 249 (256)
T TIGR00099 187 VSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAM--GNADEELKALADYVTDSNNE 249 (256)
T ss_pred CChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEe--cCchHHHHHhCCEEecCCCC
Confidence 4588999999999999999999999999999999999998666 33344444568888876554
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.49 E-value=9.9e-07 Score=93.79 Aligned_cols=110 Identities=13% Similarity=0.100 Sum_probs=83.5
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcC
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFED 282 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGD 282 (361)
+++||+.+.++.|++.|++++++|+.....+....+.+|+..++ +..+..|++.+.. ++ .+..|+||||
T Consensus 568 ~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~~~~------~~~p~~K~~~v~~----l~-~~~~v~mvGD 636 (741)
T PRK11033 568 TLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGIDFRA------GLLPEDKVKAVTE----LN-QHAPLAMVGD 636 (741)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCeec------CCCHHHHHHHHHH----Hh-cCCCEEEEEC
Confidence 67999999999999999999999999999999999999996332 2233446664444 33 2368999999
Q ss_pred ChHHHHHHHHcCCeEEEEeCCCCcccccCcceEe--CChhhhHHH
Q 018088 283 DPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAV--ANFNELSVI 325 (361)
Q Consensus 283 s~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi--~sl~EL~~~ 325 (361)
+.||..+++.|+++.++ +.+.......+|+++ +++.+|...
T Consensus 637 giNDapAl~~A~vgia~--g~~~~~a~~~adivl~~~~l~~l~~~ 679 (741)
T PRK11033 637 GINDAPAMKAASIGIAM--GSGTDVALETADAALTHNRLRGLAQM 679 (741)
T ss_pred CHHhHHHHHhCCeeEEe--cCCCHHHHHhCCEEEecCCHHHHHHH
Confidence 99999999999976555 444443344567665 567777644
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.42 E-value=3.2e-06 Score=72.90 Aligned_cols=188 Identities=13% Similarity=0.053 Sum_probs=111.6
Q ss_pred EEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcC--CHHHHHHHHHccCCChHHHHHHHHHHHHHHHHh
Q 018088 121 GLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNA--GADHVLHKVLLWGKEESELDRLNSRLTQLYYDN 197 (361)
Q Consensus 121 ~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~--~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~~ 197 (361)
.++.|+| |+.-.. ..+-+...+|...-. .+...+... ..++.+.++++.-.... +...+.
T Consensus 5 vi~sDFDGTITl~D-----s~~~itdtf~~~e~k--~l~~~vls~tiS~rd~~g~mf~~i~~s~----------~Eile~ 67 (220)
T COG4359 5 VIFSDFDGTITLND-----SNDYITDTFGPGEWK--ALKDGVLSKTISFRDGFGRMFGSIHSSL----------EEILEF 67 (220)
T ss_pred EEEecCCCceEecc-----hhHHHHhccCchHHH--HHHHHHhhCceeHHHHHHHHHHhcCCCH----------HHHHHH
Confidence 6888999 886444 334444555533211 222222222 23444444443322211 111222
Q ss_pred cccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccce--eEecC---------------CC--CCC
Q 018088 198 LLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQA--IVSEE---------------DG--MES 258 (361)
Q Consensus 198 l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~--iv~~e---------------~~--~~~ 258 (361)
+.....+.||.+++++.+++++++++|+|++...++..+++.++-.+..+. +++.+ +. +.-
T Consensus 68 llk~i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~d 147 (220)
T COG4359 68 LLKDIKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHD 147 (220)
T ss_pred HHhhcccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCccccCCC
Confidence 233458899999999999999999999999999999999999863322221 22221 11 112
Q ss_pred ChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCC--cccccCcceEeCChhhhHHHHHHhhH
Q 018088 259 MAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHR--AYDLVQADLAVANFNELSVINLRRLF 331 (361)
Q Consensus 259 KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~--~~~l~~ad~vi~sl~EL~~~ll~~l~ 331 (361)
|+. .++.+.-+++.++|.|||..|+.+|+..-.-.+- ..-. -.+.....+...++.|+..-+.+.++
T Consensus 148 K~~----vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFAK--~~L~nyc~eqn~~f~~fe~F~eIlk~iekvl~ 216 (220)
T COG4359 148 KSS----VIHELSEPNESIFYCGDSVSDLSAAKLSDLLFAK--DDLLNYCREQNLNFLEFETFYEILKEIEKVLE 216 (220)
T ss_pred cch----hHHHhhcCCceEEEecCCcccccHhhhhhhHhhH--HHHHHHHHHcCCCCcccccHHHHHHHHHHHHh
Confidence 443 4455555778899999999999999987654321 0000 01112356777888888877766664
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=98.40 E-value=6.2e-07 Score=82.20 Aligned_cols=60 Identities=13% Similarity=-0.027 Sum_probs=48.1
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcc----eEeCC
Q 018088 257 ESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQAD----LAVAN 318 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad----~vi~s 318 (361)
..|+..+..+++++|+++++|++|||+.||+.|++.+|.+.++ ++...+....++ +++++
T Consensus 158 ~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav--~na~~~~k~~a~~~~~~v~~~ 221 (236)
T TIGR02471 158 ASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVV--GNHDPELEGLRHQQRIYFANN 221 (236)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEE--cCCcHHHHHhhcCCcEEEcCC
Confidence 4689999999999999999999999999999999999988655 444444444566 55554
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.38 E-value=2.3e-06 Score=93.15 Aligned_cols=123 Identities=11% Similarity=0.115 Sum_probs=90.9
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcc----cceeEecCCC-----------------C-CCCh
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKY----FQAIVSEEDG-----------------M-ESMA 260 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~----Fd~iv~~e~~-----------------~-~~KP 260 (361)
++.|++.+.++.|++.|+++.++|+.....+....+.+|+... ....+++.+. . ...|
T Consensus 537 plr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P 616 (917)
T TIGR01116 537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEP 616 (917)
T ss_pred CCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecCH
Confidence 6899999999999999999999999999999999999998541 1122332111 0 1235
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCC--hhhhHHHHH
Q 018088 261 HRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVAN--FNELSVINL 327 (361)
Q Consensus 261 ~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~s--l~EL~~~ll 327 (361)
+--..+++.++...+.|.|+||+.||+.|.+.|+++.++ +.+.......||+++.+ +..+...+.
T Consensus 617 ~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~--g~g~~~ak~aAD~vl~dd~f~~i~~~i~ 683 (917)
T TIGR01116 617 SHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAM--GSGTEVAKEASDMVLADDNFATIVAAVE 683 (917)
T ss_pred HHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEEC--CCCcHHHHHhcCeEEccCCHHHHHHHHH
Confidence 544556666666667888999999999999999987544 33333333469999987 888877654
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=98.34 E-value=3.2e-06 Score=88.27 Aligned_cols=120 Identities=13% Similarity=0.120 Sum_probs=92.7
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcC
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFED 282 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGD 282 (361)
++.||+++.+++|++.|+++.++|+.....+...-+.+|++++|. .-+|+--..+.++++-.-+-|.|+||
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~v~A---------~~~PedK~~iV~~lQ~~G~~VaMtGD 511 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDRFVA---------ECKPEDKINVIREEQAKGHIVAMTGD 511 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCceEEc---------CCCHHHHHHHHHHHHhCCCEEEEECC
Confidence 679999999999999999999999999999999999999975432 34677555566666555567889999
Q ss_pred ChHHHHHHHHcCCeEEEEeCCCCcccccCcceEe--CChhhhHHHHH--HhhHhc
Q 018088 283 DPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAV--ANFNELSVINL--RRLFAN 333 (361)
Q Consensus 283 s~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi--~sl~EL~~~ll--~~l~~~ 333 (361)
+.||..+.+.|.++.++ +.+.....+.+|.++ +++..+...+. ++.|.|
T Consensus 512 GvNDAPALa~ADVGIAM--gsGTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n 564 (673)
T PRK14010 512 GTNDAPALAEANVGLAM--NSGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMT 564 (673)
T ss_pred ChhhHHHHHhCCEEEEe--CCCCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999988665 444444445688777 46777766544 355444
|
|
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=98.29 E-value=3.5e-06 Score=78.81 Aligned_cols=50 Identities=20% Similarity=0.184 Sum_probs=47.0
Q ss_pred CccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCC
Q 018088 205 MEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEED 254 (361)
Q Consensus 205 ~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~ 254 (361)
.|++.++|++|+++|++++|+||+.+..+...++.+|+..+|+.+++++.
T Consensus 150 dp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~ 199 (303)
T PHA03398 150 DPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGR 199 (303)
T ss_pred ChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCC
Confidence 48889999999999999999999999999999999999999999998875
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=98.29 E-value=3.4e-06 Score=88.01 Aligned_cols=122 Identities=11% Similarity=0.120 Sum_probs=88.2
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcC
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFED 282 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGD 282 (361)
++.||+.+.++.|++.|+++.++|+.+...+....+.+|+++++. .-+|+--..+.+++.-....+.|+||
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~v~a---------~~~PedK~~~v~~lq~~g~~VamvGD 516 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDDFIA---------EATPEDKIALIRQEQAEGKLVAMTGD 516 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCEEEc---------CCCHHHHHHHHHHHHHcCCeEEEECC
Confidence 679999999999999999999999999999999999999965432 23454333333333333457999999
Q ss_pred ChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeC--ChhhhHHHHH--HhhHhcCC
Q 018088 283 DPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVA--NFNELSVINL--RRLFANKG 335 (361)
Q Consensus 283 s~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~--sl~EL~~~ll--~~l~~~~~ 335 (361)
+.||..+.+.|+++.++ +.+.......+|+++- ++..+...+. ++++.++|
T Consensus 517 G~NDapAL~~AdvGiAm--~~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~ 571 (675)
T TIGR01497 517 GTNDAPALAQADVGVAM--NSGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRG 571 (675)
T ss_pred CcchHHHHHhCCEeEEe--CCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988666 3444444456787764 5666665443 34444443
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=98.26 E-value=1.1e-05 Score=74.70 Aligned_cols=45 Identities=18% Similarity=0.121 Sum_probs=40.1
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEe
Q 018088 257 ESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLI 301 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~ 301 (361)
..|+..+..+++++|+++++|++|||+.||+.|++.++..++++.
T Consensus 166 ~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~ 210 (249)
T TIGR01485 166 SGKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVS 210 (249)
T ss_pred CChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEEC
Confidence 468899999999999999999999999999999999776666663
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=98.24 E-value=5.1e-05 Score=69.02 Aligned_cols=162 Identities=12% Similarity=-0.016 Sum_probs=97.2
Q ss_pred CCCcccchhhhHHHHHHhHHHHHhhhcCCCCceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCH
Q 018088 88 DGPLKVDVDFLNDRLQEGFLKRIRYAMKPDEAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGA 166 (361)
Q Consensus 88 ~g~l~~dv~~~~~~~~~~~~~rir~~m~~~~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~ 166 (361)
.|.-+.|+..+.+......... ....+...+||||+| |++++.+..... .+|...-....+
T Consensus 49 ~~~Y~~D~~~v~~~a~~y~~~~---~~~~dg~~A~V~DIDET~LsN~py~~~~------~~g~~~~~~~~~--------- 110 (229)
T TIGR01675 49 SKQYKRDVKRVVDEAYFYAKSL---ALSGDGMDAWIFDVDDTLLSNIPYYKKH------GYGTEKTDPTAF--------- 110 (229)
T ss_pred ccccHHHHHHHHHHHHHHHHHh---hccCCCCcEEEEccccccccCHHHHHHh------ccCCCcCCHHHH---------
Confidence 3477788888777665443333 122456789999999 999887432111 112111000000
Q ss_pred HHHHHHHHccCCChHHHHHHHHHHHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHH---HHHHHHhCCCC
Q 018088 167 DHVLHKVLLWGKEESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRK---MVEALERMGLL 243 (361)
Q Consensus 167 ~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~---~~~~L~~lgl~ 243 (361)
.. + .. ....++.|++.++++.|+++|++++++||..... +...|...|+.
T Consensus 111 ----~~-----------------w---v~---~~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~ 163 (229)
T TIGR01675 111 ----WL-----------------W---LG---KGAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFT 163 (229)
T ss_pred ----HH-----------------H---HH---cCCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCC
Confidence 00 0 00 1344789999999999999999999999987555 67778888886
Q ss_pred cccceeEecCCCCCC------ChHHHHHHHH-HcCCCCCcEEEEcCChHHHHHHHHcCCeEEEE
Q 018088 244 KYFQAIVSEEDGMES------MAHRFLSAAV-KLDRKPSKCVVFEDDPRAITAAHNCTMMAVGL 300 (361)
Q Consensus 244 ~~Fd~iv~~e~~~~~------KP~~~~~~~~-klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V 300 (361)
.+ +.++--...... |-+....+.+ .+.| +..|||..+|+.. ..+|..++-+
T Consensus 164 ~~-~~LiLR~~~d~~~~~~~yKs~~R~~l~~~GYrI----v~~iGDq~sDl~G-~~~~~RtFKL 221 (229)
T TIGR01675 164 GW-KHLILRGLEDSNKTVVTYKSEVRKSLMEEGYRI----WGNIGDQWSDLLG-SPPGRRTFKL 221 (229)
T ss_pred Cc-CeeeecCCCCCCchHhHHHHHHHHHHHhCCceE----EEEECCChHHhcC-CCccCceeeC
Confidence 55 555544322223 3333333332 1222 5689999999955 3455555543
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=98.21 E-value=8.2e-06 Score=85.34 Aligned_cols=123 Identities=11% Similarity=0.113 Sum_probs=94.2
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcC
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFED 282 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGD 282 (361)
++.||+++.+++|++.|+++.++|+.+...+...-+.+|++++|. .-+|+--..+.++++-..+-|.|+||
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~v~A---------~~~PedK~~iV~~lQ~~G~~VaMtGD 515 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFLA---------EATPEDKLALIRQEQAEGRLVAMTGD 515 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcEEEc---------cCCHHHHHHHHHHHHHcCCeEEEECC
Confidence 579999999999999999999999999999999999999965332 24676555555555545566899999
Q ss_pred ChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeC--ChhhhHHHHH--HhhHhcCCC
Q 018088 283 DPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVA--NFNELSVINL--RRLFANKGS 336 (361)
Q Consensus 283 s~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~--sl~EL~~~ll--~~l~~~~~~ 336 (361)
+.||..+.+.|.++.++ +.+..-..+.+|.++- ++..+...+. ++++-.+|.
T Consensus 516 GvNDAPALa~ADVGIAM--gsGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~ 571 (679)
T PRK01122 516 GTNDAPALAQADVGVAM--NSGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGA 571 (679)
T ss_pred CcchHHHHHhCCEeEEe--CCCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHh
Confidence 99999999999988666 4444444456887764 6777776554 455555554
|
|
| >PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins | Back alignment and domain information |
|---|
Probab=98.19 E-value=1.9e-05 Score=70.11 Aligned_cols=112 Identities=17% Similarity=0.193 Sum_probs=69.9
Q ss_pred ccCCCCCccHHHHHHHHhhCCCcEEEEeCCCH-------HHHHHHHHhC-CCCcccceeEecCCCCCCChHHHHHHHHHc
Q 018088 199 LSVTEPMEGLQEWLDAVSSARIPCAVVSGLDR-------RKMVEALERM-GLLKYFQAIVSEEDGMESMAHRFLSAAVKL 270 (361)
Q Consensus 199 ~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~-------~~~~~~L~~l-gl~~~Fd~iv~~e~~~~~KP~~~~~~~~kl 270 (361)
....+|.||+.+.|+.|.+.|+.+.++|..+. ......+++. |...+-+.+++. .|- .+
T Consensus 69 f~~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~~~~~~~~~-----~K~--------~v 135 (191)
T PF06941_consen 69 FSNLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIPYDNLIFTG-----DKT--------LV 135 (191)
T ss_dssp TTT--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHHHCCEEEES-----SGG--------GC
T ss_pred hcCCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCchheEEEec-----CCC--------eE
Confidence 34568999999999999999977777776432 2334445544 432222344443 231 12
Q ss_pred CCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhhhHHHHHHh
Q 018088 271 DRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNELSVINLRR 329 (361)
Q Consensus 271 gi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~EL~~~ll~~ 329 (361)
+. + ++|+|++..+..+.+.|+.++.+..+++.... .-..+.+++|+..+++..
T Consensus 136 ~~--D--vlIDD~~~n~~~~~~~g~~~iLfd~p~Nr~~~--~~~Rv~~W~ei~~~i~~~ 188 (191)
T PF06941_consen 136 GG--D--VLIDDRPHNLEQFANAGIPVILFDQPYNRDES--NFPRVNNWEEIEDLILSS 188 (191)
T ss_dssp ----S--EEEESSSHHHSS-SSESSEEEEE--GGGTT----TSEEE-STTSHHHHHHHT
T ss_pred ec--c--EEecCChHHHHhccCCCceEEEEcCCCCCCCC--CCccCCCHHHHHHHHHhc
Confidence 21 2 89999999999999999999988544444333 568899999999887764
|
5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A .... |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.17 E-value=1.5e-05 Score=72.39 Aligned_cols=58 Identities=16% Similarity=0.076 Sum_probs=49.4
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhh
Q 018088 262 RFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNE 321 (361)
Q Consensus 262 ~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~E 321 (361)
.+..+++.+|++++++++|||+.||+.|.+.+|.+.++ +++...-...|++++.+-.+
T Consensus 190 ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am--~na~~~~k~~a~~i~~~~~~ 247 (254)
T PF08282_consen 190 AIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAM--GNATPELKKAADYITPSNND 247 (254)
T ss_dssp HHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEE--TTS-HHHHHHSSEEESSGTC
T ss_pred HHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEE--cCCCHHHHHhCCEEecCCCC
Confidence 48999999999999999999999999999999999777 55555555679999888776
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.13 E-value=1.3e-05 Score=84.01 Aligned_cols=113 Identities=13% Similarity=0.146 Sum_probs=86.6
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEc
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFE 281 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IG 281 (361)
..+.|++.+.+++|++.|+++.++|+..+..++..-+.+|+++++.. -+|+--....+++.-.-..+.|||
T Consensus 536 D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~v~Ae---------llPedK~~~V~~l~~~g~~VamVG 606 (713)
T COG2217 536 DELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDEVRAE---------LLPEDKAEIVRELQAEGRKVAMVG 606 (713)
T ss_pred CCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHhhecc---------CCcHHHHHHHHHHHhcCCEEEEEe
Confidence 36899999999999999999999999999999999999999665532 345544445555554447899999
Q ss_pred CChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeC--ChhhhHHH
Q 018088 282 DDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVA--NFNELSVI 325 (361)
Q Consensus 282 Ds~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~--sl~EL~~~ 325 (361)
|+.||..+...|-++.++ |.+..-..+-||.++- ++..+...
T Consensus 607 DGINDAPALA~AdVGiAm--G~GtDvA~eaADvvL~~~dL~~v~~a 650 (713)
T COG2217 607 DGINDAPALAAADVGIAM--GSGTDVAIEAADVVLMRDDLSAVPEA 650 (713)
T ss_pred CCchhHHHHhhcCeeEee--cCCcHHHHHhCCEEEecCCHHHHHHH
Confidence 999999999999987655 4444444456787654 46666543
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.11 E-value=3.2e-06 Score=77.14 Aligned_cols=43 Identities=5% Similarity=-0.086 Sum_probs=37.6
Q ss_pred CCCChHHHHHHHHHcCC--CCCcEEEEcCChHHHHHHHHcCCeEE
Q 018088 256 MESMAHRFLSAAVKLDR--KPSKCVVFEDDPRAITAAHNCTMMAV 298 (361)
Q Consensus 256 ~~~KP~~~~~~~~klgi--~p~~~v~IGDs~~Di~aA~~aG~~~v 298 (361)
...|+..+..+++.+++ .+++|++|||+.||+.|.+.+|++++
T Consensus 179 ~~sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v~ 223 (225)
T TIGR02461 179 GSDKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAFL 223 (225)
T ss_pred CCCHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcEe
Confidence 45689999999888876 67799999999999999999999754
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=98.10 E-value=1.3e-05 Score=72.48 Aligned_cols=70 Identities=14% Similarity=0.169 Sum_probs=51.4
Q ss_pred eCCCHHHHHHHHHhCCCC----cccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEE
Q 018088 226 SGLDRRKMVEALERMGLL----KYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAV 298 (361)
Q Consensus 226 Sn~~~~~~~~~L~~lgl~----~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v 298 (361)
++.....+...++..++. .+|..+... ...|+..+..+++++|+++++|++|||+.||+.|.+.+|.+++
T Consensus 146 ~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~---~~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va 219 (221)
T TIGR02463 146 SDSRMPRFTALLADLGLAIVQGNRFSHVLGA---SSSKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVV 219 (221)
T ss_pred chhHHHHHHHHHHHcCCeEEecCCeeEEecC---CCCHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEE
Confidence 344445555666665654 222222222 2358999999999999999999999999999999999998855
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=98.09 E-value=1.4e-05 Score=73.02 Aligned_cols=87 Identities=15% Similarity=0.180 Sum_probs=63.0
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCC---CHHHHHHHHHhCCCCcccceeEecCCCC------CCChHHHHHHHHH-cCC
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGL---DRRKMVEALERMGLLKYFQAIVSEEDGM------ESMAHRFLSAAVK-LDR 272 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~---~~~~~~~~L~~lgl~~~Fd~iv~~e~~~------~~KP~~~~~~~~k-lgi 272 (361)
++.||+.++++.++++|+.|+++||. .+......|...|...+-..++-.+... ..|......+.++ +.+
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~l~lr~~~~~~~~~~~~yK~~~r~~i~~~Gy~I 194 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWDHLILRPDKDPSKKSAVEYKSERRKEIEKKGYRI 194 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSCGEEEEESSTSS------SHHHHHHHHHTTEEE
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccchhccccccccccccccccchHHHHHHHHcCCcE
Confidence 67999999999999999999999984 4566777788889765433344443321 2366666666666 444
Q ss_pred CCCcEEEEcCChHHHHHHHHc
Q 018088 273 KPSKCVVFEDDPRAITAAHNC 293 (361)
Q Consensus 273 ~p~~~v~IGDs~~Di~aA~~a 293 (361)
++.|||..+|+..++..
T Consensus 195 ----i~~iGD~~~D~~~~~~~ 211 (229)
T PF03767_consen 195 ----IANIGDQLSDFSGAKTA 211 (229)
T ss_dssp ----EEEEESSGGGCHCTHHH
T ss_pred ----EEEeCCCHHHhhccccc
Confidence 78999999999885443
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.09 E-value=0.00026 Score=63.33 Aligned_cols=122 Identities=14% Similarity=0.113 Sum_probs=91.4
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhC---CCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEE
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERM---GLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVV 279 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~l---gl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~ 279 (361)
..++++...++.-+..|++++|.|.+.....+.+...- .+..|++..+....+.+..-..|.++.+.+|.++.+.++
T Consensus 123 ~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg~s~~gdl~~y~~gyfDt~iG~K~e~~sy~~I~~~Ig~s~~eiLf 202 (254)
T KOG2630|consen 123 HVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFGYSDAGDLRKYISGYFDTTIGLKVESQSYKKIGHLIGKSPREILF 202 (254)
T ss_pred cccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHcccCcchHHHHhhhhhhccccceehhHHHHHHHHHhCCChhheEE
Confidence 67999999999999999999999999877776666554 344455555544333233356999999999999999999
Q ss_pred EcCChHHHHHHHHcCCeEEEEeCCCCcc---cccCcceEeCChhhhHH
Q 018088 280 FEDDPRAITAAHNCTMMAVGLIGAHRAY---DLVQADLAVANFNELSV 324 (361)
Q Consensus 280 IGDs~~Di~aA~~aG~~~v~V~g~~~~~---~l~~ad~vi~sl~EL~~ 324 (361)
.-|-+....+|+.+|+.+..+..+++.. +..-.--++.+|..|..
T Consensus 203 LTd~~~Ea~aa~~aGl~a~l~~rPgna~l~dd~~~~y~~i~~F~~l~~ 250 (254)
T KOG2630|consen 203 LTDVPREAAAARKAGLQAGLVSRPGNAPLPDDAKVEYCVIWSFEILEN 250 (254)
T ss_pred eccChHHHHHHHhcccceeeeecCCCCCCCcccccceeeeccchhhhc
Confidence 9999999999999999988774433322 22223566777777653
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.01 E-value=7.9e-06 Score=76.10 Aligned_cols=63 Identities=14% Similarity=0.083 Sum_probs=52.0
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcc--eEeCChhh
Q 018088 257 ESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQAD--LAVANFNE 321 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad--~vi~sl~E 321 (361)
..|...+..+++.+|++++++++|||+.||++|.+.+|.+.++ ++........|+ +++.+.+|
T Consensus 189 vsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm--~NA~~~vK~~A~~~~v~~~n~e 253 (266)
T PRK10976 189 VSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIM--GNAHQRLKDLLPELEVIGSNAD 253 (266)
T ss_pred CChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeee--cCCcHHHHHhCCCCeecccCch
Confidence 4589999999999999999999999999999999999998777 444555555565 67766554
|
|
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=97.99 E-value=2.2e-05 Score=67.73 Aligned_cols=92 Identities=14% Similarity=0.134 Sum_probs=65.2
Q ss_pred CCccHHHHHHHHhhCCCcEEEEeCCC--------------HHHHHHHHHhCCCCcccceeEecCCCCCCCh--HHHHHHH
Q 018088 204 PMEGLQEWLDAVSSARIPCAVVSGLD--------------RRKMVEALERMGLLKYFQAIVSEEDGMESMA--HRFLSAA 267 (361)
Q Consensus 204 ~~pgv~elL~~L~~~Gi~vaivSn~~--------------~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP--~~~~~~~ 267 (361)
..|++.+.|++|.+.|+.++|+||.. ...+..+++.+++. +..+++......+|| -++..++
T Consensus 30 ~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l~ip--~~~~~a~~~d~~RKP~~GM~~~~~ 107 (159)
T PF08645_consen 30 FPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKELGIP--IQVYAAPHKDPCRKPNPGMWEFAL 107 (159)
T ss_dssp C-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHCTS---EEEEECGCSSTTSTTSSHHHHHHC
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHcCCc--eEEEecCCCCCCCCCchhHHHHHH
Confidence 35689999999999999999999841 23355566667764 444555544456676 5889999
Q ss_pred HHcCC----CCCcEEEEcCC-----------hHHHHHHHHcCCeE
Q 018088 268 VKLDR----KPSKCVVFEDD-----------PRAITAAHNCTMMA 297 (361)
Q Consensus 268 ~klgi----~p~~~v~IGDs-----------~~Di~aA~~aG~~~ 297 (361)
+.++. +.++++||||. -.|..-|.|+|+..
T Consensus 108 ~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~gi~f 152 (159)
T PF08645_consen 108 KDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALNCGIKF 152 (159)
T ss_dssp CCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHHHT--E
T ss_pred HhccccccccccceEEEeccCCCCCcccccChhHHHHHHHcCCcc
Confidence 88874 88999999996 57999999999874
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.97 E-value=4.8e-05 Score=82.40 Aligned_cols=120 Identities=12% Similarity=0.035 Sum_probs=86.7
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCC------------------CCChHHHH
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGM------------------ESMAHRFL 264 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~------------------~~KP~~~~ 264 (361)
++.|++.+.++.|++.|+++.++|+.....+....+.+|+.. +.++++.+.. .-.|+--.
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~--~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~ 592 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA--NDFLLGADIEELSDEELARELRKYHIFARLTPMQKS 592 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC--CCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHH
Confidence 679999999999999999999999999999999999999952 2344433211 12466444
Q ss_pred HHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEe--CChhhhHHHH
Q 018088 265 SAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAV--ANFNELSVIN 326 (361)
Q Consensus 265 ~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi--~sl~EL~~~l 326 (361)
.+.+.+.-....|.|+||+.||..+.+.|.++.++ +.+..-....||+++ ++|..+...+
T Consensus 593 ~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAm--g~gtdvAk~aADiVLldd~~~~I~~ai 654 (867)
T TIGR01524 593 RIIGLLKKAGHTVGFLGDGINDAPALRKADVGISV--DTAADIAKEASDIILLEKSLMVLEEGV 654 (867)
T ss_pred HHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEe--CCccHHHHHhCCEEEecCChHHHHHHH
Confidence 44554544446788999999999999999988665 333333345678776 4566665443
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.96 E-value=4.3e-05 Score=83.59 Aligned_cols=122 Identities=14% Similarity=0.079 Sum_probs=89.0
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCC------------------CCChHHHH
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGM------------------ESMAHRFL 264 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~------------------~~KP~~~~ 264 (361)
++.|++.+.++.|+++|+++.++|+.....+....+..|+..--..++++++.. .-.|+--.
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K~ 658 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDKQ 658 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHHH
Confidence 679999999999999999999999999999999999999964323344443311 12466444
Q ss_pred HHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeC-CCCcccccCcceEeC--ChhhhHHHH
Q 018088 265 SAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIG-AHRAYDLVQADLAVA--NFNELSVIN 326 (361)
Q Consensus 265 ~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g-~~~~~~l~~ad~vi~--sl~EL~~~l 326 (361)
.+.+.+.-.-..|.|+||+.||..|.+.|.++.++ | .+.......||+++. +|..+...+
T Consensus 659 ~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAm--g~~gtdvAk~aADivL~dd~f~~I~~~i 721 (941)
T TIGR01517 659 LLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSM--GISGTEVAKEASDIILLDDNFASIVRAV 721 (941)
T ss_pred HHHHHHHHCCCEEEEECCCCchHHHHHhCCcceec--CCCccHHHHHhCCEEEecCCHHHHHHHH
Confidence 44444444445799999999999999999988654 3 233334456888887 677766544
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=97.93 E-value=2.5e-05 Score=84.78 Aligned_cols=121 Identities=12% Similarity=0.054 Sum_probs=89.0
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCC------------------CCChHHHH
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGM------------------ESMAHRFL 264 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~------------------~~KP~~~~ 264 (361)
++.|++.+.++.|+++|+++.++|+.....+....+.+|+.. +.++++.+.. .-.|+--.
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~--~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~ 627 (902)
T PRK10517 550 PPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA--GEVLIGSDIETLSDDELANLAERTTLFARLTPMHKE 627 (902)
T ss_pred cchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc--cCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHH
Confidence 679999999999999999999999999999999999999952 3445544321 12466445
Q ss_pred HHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEe--CChhhhHHHHH
Q 018088 265 SAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAV--ANFNELSVINL 327 (361)
Q Consensus 265 ~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi--~sl~EL~~~ll 327 (361)
.+.+.+.-...-|.|+||+.||..+.+.|.++.++ |.+..-....||+++ +++..+...+.
T Consensus 628 ~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAm--g~gtdvAkeaADiVLldd~~~~I~~ai~ 690 (902)
T PRK10517 628 RIVTLLKREGHVVGFMGDGINDAPALRAADIGISV--DGAVDIAREAADIILLEKSLMVLEEGVI 690 (902)
T ss_pred HHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEe--CCcCHHHHHhCCEEEecCChHHHHHHHH
Confidence 55555554456788999999999999999988665 333333445688877 45666655443
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=97.93 E-value=5.4e-05 Score=83.45 Aligned_cols=122 Identities=10% Similarity=0.093 Sum_probs=88.0
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcc----------cceeEecCCCC----------------
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKY----------FQAIVSEEDGM---------------- 256 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~----------Fd~iv~~e~~~---------------- 256 (361)
++.|++.+.++.|+++|+++.++|+.....+....+.+|+..- -+.++++.+..
T Consensus 646 p~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~V 725 (1053)
T TIGR01523 646 PPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCLV 725 (1053)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcCeE
Confidence 7899999999999999999999999999999999999999532 12355554321
Q ss_pred --CCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeC-CCCcccccCcceEeCC--hhhhHHHH
Q 018088 257 --ESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIG-AHRAYDLVQADLAVAN--FNELSVIN 326 (361)
Q Consensus 257 --~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g-~~~~~~l~~ad~vi~s--l~EL~~~l 326 (361)
.-.|+--..+.+.+.-....|.|+||+.||..|.+.|.++.++ | .+.......||+++.+ |..+...+
T Consensus 726 ~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAm--g~~gt~vak~aADivl~dd~f~~I~~~i 798 (1053)
T TIGR01523 726 IARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAM--GINGSDVAKDASDIVLSDDNFASILNAI 798 (1053)
T ss_pred EEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEec--CCCccHHHHHhcCEEEecCCHHHHHHHH
Confidence 1136544444555544456789999999999999999988664 2 2222333468888854 66665543
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=97.91 E-value=6e-05 Score=81.91 Aligned_cols=121 Identities=11% Similarity=0.031 Sum_probs=89.4
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCC------------------CCChHHHH
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGM------------------ESMAHRFL 264 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~------------------~~KP~~~~ 264 (361)
++.|++.+.++.|++.|+++.++|+.....+....+.+|+.. +.++++.+.. .-.|+--.
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~--~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~ 627 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP--GEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKS 627 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC--CCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHH
Confidence 679999999999999999999999999999999999999952 2344443321 11476555
Q ss_pred HHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEe--CChhhhHHHHH
Q 018088 265 SAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAV--ANFNELSVINL 327 (361)
Q Consensus 265 ~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi--~sl~EL~~~ll 327 (361)
.+.+.+.-.-.-|.|+||+.||..+.+.|-++.++ |.+..-....||+++ ++|..+...+.
T Consensus 628 ~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAm--g~gtdvAkeaADiVLldd~f~~Iv~ai~ 690 (903)
T PRK15122 628 RVLKALQANGHTVGFLGDGINDAPALRDADVGISV--DSGADIAKESADIILLEKSLMVLEEGVI 690 (903)
T ss_pred HHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEe--CcccHHHHHhcCEEEecCChHHHHHHHH
Confidence 55555554556789999999999999999988555 333433445688887 56777665443
|
|
| >PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3 | Back alignment and domain information |
|---|
Probab=97.87 E-value=6.9e-05 Score=74.82 Aligned_cols=101 Identities=11% Similarity=0.122 Sum_probs=71.0
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhC---------CCCcccceeEecCCC-----------------
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERM---------GLLKYFQAIVSEEDG----------------- 255 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~l---------gl~~~Fd~iv~~e~~----------------- 255 (361)
+...|.+..+|+.|+++|-++.++||+.-.++...++.+ ...++||.||+...-
T Consensus 182 i~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr~vd~~~ 261 (448)
T PF05761_consen 182 IHKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFREVDTET 261 (448)
T ss_dssp EE--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCHHHCT---EEEEETTT
T ss_pred ccCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCcccCCCCceEEEECCC
Confidence 345789999999999999999999999999999999985 246789998875210
Q ss_pred CC---C-------Ch-----HHHHHHHHHcCCCCCcEEEEcCChH-HHHHHHHc-CCeEEEEeC
Q 018088 256 ME---S-------MA-----HRFLSAAVKLDRKPSKCVVFEDDPR-AITAAHNC-TMMAVGLIG 302 (361)
Q Consensus 256 ~~---~-------KP-----~~~~~~~~klgi~p~~~v~IGDs~~-Di~aA~~a-G~~~v~V~g 302 (361)
+. . |. -......+.+|...++|++|||+.- |+..++.. |+.+++|..
T Consensus 262 g~l~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii~ 325 (448)
T PF05761_consen 262 GKLKWGKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKKRHGWRTAAIIP 325 (448)
T ss_dssp SSEECS---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESSTTTTHHHHHHHH-SEEEEE-T
T ss_pred CccccccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCchhhhhhhhccccceEEEEEeh
Confidence 00 0 01 1366777888999999999999987 98777776 999999853
|
1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A .... |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=97.83 E-value=3.4e-05 Score=82.44 Aligned_cols=116 Identities=14% Similarity=0.144 Sum_probs=83.3
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCC-----------------------CC-CC
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEED-----------------------GM-ES 258 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~-----------------------~~-~~ 258 (361)
++.|++.+.++.|++.|+++.++|+.....+....+.+|+.+. ++++++ +. .-
T Consensus 442 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~ 518 (755)
T TIGR01647 442 PPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTN---IYTADVLLKGDNRDDLPSGELGEMVEDADGFAEV 518 (755)
T ss_pred CChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC---CcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEec
Confidence 6799999999999999999999999999999999999999642 222111 11 12
Q ss_pred ChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeC--ChhhhH
Q 018088 259 MAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVA--NFNELS 323 (361)
Q Consensus 259 KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~--sl~EL~ 323 (361)
.|+--..+.+.+.-....|.|+||+.||..+.+.|.++.++ +.+..-....||+++- ++..+.
T Consensus 519 ~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm--~~gtdvAkeaADivLl~d~l~~I~ 583 (755)
T TIGR01647 519 FPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAV--AGATDAARSAADIVLTEPGLSVIV 583 (755)
T ss_pred CHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEe--cCCcHHHHHhCCEEEEcCChHHHH
Confidence 46644555555555556799999999999999999988554 3333333345776653 444443
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >COG2503 Predicted secreted acid phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.0004 Score=62.71 Aligned_cols=85 Identities=16% Similarity=0.186 Sum_probs=60.3
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCHHH----HHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcE
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDRRK----MVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKC 277 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~----~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~ 277 (361)
..+.||+.++++...++|..|..+||..... ...-|++.|+...-..-+---....+|...+..+.+-+ +-|
T Consensus 121 sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~~~~llkk~~k~Ke~R~~~v~k~~----~iV 196 (274)
T COG2503 121 SKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLESHLLLKKDKKSKEVRRQAVEKDY----KIV 196 (274)
T ss_pred cccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccccceEEeeCCCcHHHHHHHHhhcc----cee
Confidence 4789999999999999999999999987666 45556667776544322211133445666777776644 448
Q ss_pred EEEcCChHHHHHH
Q 018088 278 VVFEDDPRAITAA 290 (361)
Q Consensus 278 v~IGDs~~Di~aA 290 (361)
+.|||...|....
T Consensus 197 m~vGDNl~DF~d~ 209 (274)
T COG2503 197 MLVGDNLDDFGDN 209 (274)
T ss_pred eEecCchhhhcch
Confidence 9999999876443
|
|
| >PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.002 Score=59.76 Aligned_cols=96 Identities=13% Similarity=0.221 Sum_probs=70.1
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHH---HHhCCCCcc---c----------------------ceeEecCC
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEA---LERMGLLKY---F----------------------QAIVSEED 254 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~---L~~lgl~~~---F----------------------d~iv~~e~ 254 (361)
..-+.+.++++.|++.|+++..+|........+. |+.+|++.- | ++|+.+
T Consensus 81 lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft-- 158 (252)
T PF11019_consen 81 LIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFT-- 158 (252)
T ss_pred EcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCCceeecCeEEe--
Confidence 4578899999999999999999998775555444 445576411 1 011111
Q ss_pred CCCCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHH----cCCeEEEE
Q 018088 255 GMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHN----CTMMAVGL 300 (361)
Q Consensus 255 ~~~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~----aG~~~v~V 300 (361)
.+..|...+...+.++|..|+++|||+|+...+....+ .|+..+|+
T Consensus 159 ~~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~ 208 (252)
T PF11019_consen 159 GGQDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGF 208 (252)
T ss_pred CCCccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEE
Confidence 11346789999999999999999999999988766554 57777776
|
The function is not known. |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00033 Score=67.09 Aligned_cols=90 Identities=18% Similarity=0.152 Sum_probs=70.5
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCC---HHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEE
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLD---RRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVV 279 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~---~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~ 279 (361)
.++||+.++|+.|+++|++++++||.. .......++.+|+...++.|+++. ......+++.+....+.++
T Consensus 44 ~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~~~I~ts~-------~~~~~~l~~~~~~~~~~V~ 116 (311)
T PLN02645 44 KLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTEEEIFSSS-------FAAAAYLKSINFPKDKKVY 116 (311)
T ss_pred ccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEeehH-------HHHHHHHHhhccCCCCEEE
Confidence 678999999999999999999999987 444455667889987777787762 2444455555655556688
Q ss_pred EcCChHHHHHHHHcCCeEEE
Q 018088 280 FEDDPRAITAAHNCTMMAVG 299 (361)
Q Consensus 280 IGDs~~Di~aA~~aG~~~v~ 299 (361)
++++..+...++.+|+.++.
T Consensus 117 viG~~~~~~~l~~~Gi~~~~ 136 (311)
T PLN02645 117 VIGEEGILEELELAGFQYLG 136 (311)
T ss_pred EEcCHHHHHHHHHCCCEEec
Confidence 88888899999999998765
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00016 Score=66.98 Aligned_cols=45 Identities=11% Similarity=0.008 Sum_probs=36.3
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeC
Q 018088 257 ESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIG 302 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g 302 (361)
.+|.+.+.++++++++++++++++|||.||+.|. ..+...|.|.+
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL-~~~~~~vvV~N 208 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEML-EGGDHGVVVGN 208 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHH-CCSSEEEE-TT
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHH-cCcCCEEEEcC
Confidence 4588999999999999999999999999999999 66667777643
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00047 Score=59.32 Aligned_cols=94 Identities=5% Similarity=0.020 Sum_probs=60.2
Q ss_pred CCccHHHHHHHHhhCCCcEEEEeCCCHHHHH---HHHHhC---CCCcccceeEecCCC---------CCCCh-----HHH
Q 018088 204 PMEGLQEWLDAVSSARIPCAVVSGLDRRKMV---EALERM---GLLKYFQAIVSEEDG---------MESMA-----HRF 263 (361)
Q Consensus 204 ~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~---~~L~~l---gl~~~Fd~iv~~e~~---------~~~KP-----~~~ 263 (361)
..|++.++++.++++|++++++|+.+..... ..++.+ |..-....+++.... ...+| +.+
T Consensus 28 ~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~~~g~~~~~~~~e~i~~~~~~~K~~~l 107 (157)
T smart00775 28 THPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLLSPDRLFAALHREVISKKPEVFKIACL 107 (157)
T ss_pred CCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEEcCCcchhhhhcccccCCHHHHHHHHH
Confidence 4689999999999999999999998877664 566652 211111344444321 12234 344
Q ss_pred HHHHHHcCCCCCc-EEEEcCChHHHHHHHHcCCeE
Q 018088 264 LSAAVKLDRKPSK-CVVFEDDPRAITAAHNCTMMA 297 (361)
Q Consensus 264 ~~~~~klgi~p~~-~v~IGDs~~Di~aA~~aG~~~ 297 (361)
..+.+.+.-.--. +..+||+.+|+++=+++|+..
T Consensus 108 ~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~~ 142 (157)
T smart00775 108 RDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIPP 142 (157)
T ss_pred HHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCCh
Confidence 4444443211223 346899999999999999963
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00022 Score=78.46 Aligned_cols=123 Identities=15% Similarity=0.111 Sum_probs=86.4
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCccc------------------------ceeEecCCCC--
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYF------------------------QAIVSEEDGM-- 256 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~F------------------------d~iv~~e~~~-- 256 (361)
++.|++.+.++.|+++|+++.++|+.....+....+.+|+..-- ..++++.+..
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l 647 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDM 647 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhC
Confidence 77999999999999999999999999999999999999884210 1344543321
Q ss_pred ------------------CCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCC-CCcccccCcceEeC
Q 018088 257 ------------------ESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGA-HRAYDLVQADLAVA 317 (361)
Q Consensus 257 ------------------~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~-~~~~~l~~ad~vi~ 317 (361)
...|+--..+.+.+.-...-|.|+||+.||+.|.+.|.++.++ |. +.......||+++.
T Consensus 648 ~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiam--g~~G~~vak~aADivL~ 725 (997)
T TIGR01106 648 TSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAM--GIAGSDVSKQAADMILL 725 (997)
T ss_pred CHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceec--CCcccHHHHHhhceEEe
Confidence 1135533334444443345688999999999999999988654 32 22223345788877
Q ss_pred C--hhhhHHHHH
Q 018088 318 N--FNELSVINL 327 (361)
Q Consensus 318 s--l~EL~~~ll 327 (361)
+ |.-+...+.
T Consensus 726 dd~f~~Iv~ai~ 737 (997)
T TIGR01106 726 DDNFASIVTGVE 737 (997)
T ss_pred cCCHHHHHHHHH
Confidence 6 776665433
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00012 Score=81.23 Aligned_cols=52 Identities=15% Similarity=0.271 Sum_probs=42.3
Q ss_pred CcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhhhHHHHH
Q 018088 275 SKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNELSVINL 327 (361)
Q Consensus 275 ~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~EL~~~ll 327 (361)
.-|++||||.||+.|.+.|.+++ ++.|..-.+....+|+.|..|..|..+++
T Consensus 872 ~vtlaIGDGaNDv~mIq~AdVGI-GIsG~EG~qA~~aSDfaI~~Fr~L~rLLl 923 (1178)
T PLN03190 872 DMTLAIGDGANDVSMIQMADVGV-GISGQEGRQAVMASDFAMGQFRFLVPLLL 923 (1178)
T ss_pred cEEEEECCCcchHHHHHhcCeee-eecCchhHHHHHhhccchhhhHHHHHHHH
Confidence 45899999999999999998775 76665444444568999999999988776
|
|
| >TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00012 Score=62.86 Aligned_cols=80 Identities=19% Similarity=0.172 Sum_probs=64.2
Q ss_pred CCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCC-ccc-ceeEecCCCCCCChHHHHHHH-HHcCCCCCcE
Q 018088 201 VTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLL-KYF-QAIVSEEDGMESMAHRFLSAA-VKLDRKPSKC 277 (361)
Q Consensus 201 ~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~-~~F-d~iv~~e~~~~~KP~~~~~~~-~klgi~p~~~ 277 (361)
...++||+.++|+.|++. ++++|+|++.+.++...++.++.. .+| +.+++.+++... +.+-+ .-++.+.+.+
T Consensus 56 ~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~~~~F~~ri~~rd~~~~~----~~KdL~~i~~~d~~~v 130 (156)
T TIGR02250 56 LTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPDGKYFGDRIISRDESGSP----HTKSLLRLFPADESMV 130 (156)
T ss_pred EEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcCCCeeccEEEEeccCCCC----ccccHHHHcCCCcccE
Confidence 347899999999999966 999999999999999999999988 488 677887765321 11123 3357788999
Q ss_pred EEEcCChH
Q 018088 278 VVFEDDPR 285 (361)
Q Consensus 278 v~IGDs~~ 285 (361)
|+|+|++.
T Consensus 131 vivDd~~~ 138 (156)
T TIGR02250 131 VIIDDRED 138 (156)
T ss_pred EEEeCCHH
Confidence 99999985
|
This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031. |
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00027 Score=74.34 Aligned_cols=111 Identities=12% Similarity=0.127 Sum_probs=80.3
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEc
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFE 281 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IG 281 (361)
.++.|++...++.|++.|++++++|+.+...++...++.|+ +.+++ +..+..|.+.++.+.+ ....+.|||
T Consensus 722 D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi----~~V~a-ev~P~~K~~~Ik~lq~----~~~~VaMVG 792 (951)
T KOG0207|consen 722 DQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGI----DNVYA-EVLPEQKAEKIKEIQK----NGGPVAMVG 792 (951)
T ss_pred cccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCc----ceEEe-ccCchhhHHHHHHHHh----cCCcEEEEe
Confidence 36799999999999999999999999999999999999994 44444 3334445555544444 446799999
Q ss_pred CChHHHHHHHHcCCeEEEEeCCCCcccccCcceEe--CChhhhH
Q 018088 282 DDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAV--ANFNELS 323 (361)
Q Consensus 282 Ds~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi--~sl~EL~ 323 (361)
|+.||-.+...|.++.+. +.+..-..+.||+++ .++.++.
T Consensus 793 DGINDaPALA~AdVGIai--g~gs~vAieaADIVLmrn~L~~v~ 834 (951)
T KOG0207|consen 793 DGINDAPALAQADVGIAI--GAGSDVAIEAADIVLMRNDLRDVP 834 (951)
T ss_pred CCCCccHHHHhhccceee--ccccHHHHhhCCEEEEccchhhhH
Confidence 999999999888877544 222333334567654 3444444
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00017 Score=79.89 Aligned_cols=123 Identities=13% Similarity=0.163 Sum_probs=83.2
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccc-----------------------------------
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQ----------------------------------- 247 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd----------------------------------- 247 (361)
++.||+.+.++.|+++|+++.++|+.....+.......|+...-.
T Consensus 631 ~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 710 (1057)
T TIGR01652 631 KLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLG 710 (1057)
T ss_pred hhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhc
Confidence 789999999999999999999999998888888877776642111
Q ss_pred ------eeEecCCCC------------------------CCChHHHHHHHHHcCCC-CCcEEEEcCChHHHHHHHHcCCe
Q 018088 248 ------AIVSEEDGM------------------------ESMAHRFLSAAVKLDRK-PSKCVVFEDDPRAITAAHNCTMM 296 (361)
Q Consensus 248 ------~iv~~e~~~------------------------~~KP~~~~~~~~klgi~-p~~~v~IGDs~~Di~aA~~aG~~ 296 (361)
.+++++... .-.|+--..+.+.+.-. ...|.++|||.||+.|.+.|.++
T Consensus 711 ~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVG 790 (1057)
T TIGR01652 711 DSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVG 790 (1057)
T ss_pred cCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCee
Confidence 133332100 00132111122222211 45799999999999999999877
Q ss_pred EEEEeCCCCcccccCcceEeCChhhhHHHH
Q 018088 297 AVGLIGAHRAYDLVQADLAVANFNELSVIN 326 (361)
Q Consensus 297 ~v~V~g~~~~~~l~~ad~vi~sl~EL~~~l 326 (361)
. ++.|.........+|+++.+|..|..++
T Consensus 791 I-gi~g~eg~qA~~aaD~~i~~F~~L~~ll 819 (1057)
T TIGR01652 791 V-GISGKEGMQAVMASDFAIGQFRFLTKLL 819 (1057)
T ss_pred e-EecChHHHHHHHhhhhhhhhHHHHHHHH
Confidence 5 6655432233356999999998887765
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.0032 Score=58.49 Aligned_cols=96 Identities=8% Similarity=0.069 Sum_probs=59.2
Q ss_pred CCCCCccHHHHHHHHhhCCCcEEEEeCCCH---HHHHHHHHhCCCCcccceeEecCCCC-CCCh------HHHHHHHHHc
Q 018088 201 VTEPMEGLQEWLDAVSSARIPCAVVSGLDR---RKMVEALERMGLLKYFQAIVSEEDGM-ESMA------HRFLSAAVKL 270 (361)
Q Consensus 201 ~~~~~pgv~elL~~L~~~Gi~vaivSn~~~---~~~~~~L~~lgl~~~Fd~iv~~e~~~-~~KP------~~~~~~~~kl 270 (361)
..++.|++.++.+.++++|++|.++||... ......|...|...+ +.++--.... ..+. +....+. +-
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~-~~LiLR~~~D~~~~~av~yKs~~R~~li-~e 220 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTW-EKLILKDPQDNSAENAVEYKTAARAKLI-QE 220 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCc-ceeeecCCCCCccchhHHHHHHHHHHHH-Hc
Confidence 457899999999999999999999999764 345556667787644 4444433221 2222 2222222 22
Q ss_pred CCCCCcEEEEcCChHHHHHHHHcCCeEEEE
Q 018088 271 DRKPSKCVVFEDDPRAITAAHNCTMMAVGL 300 (361)
Q Consensus 271 gi~p~~~v~IGDs~~Di~aA~~aG~~~v~V 300 (361)
|. .=+..|||..+|+......+..+.-+
T Consensus 221 GY--rIv~~iGDq~sDl~G~~~g~~RtFKL 248 (275)
T TIGR01680 221 GY--NIVGIIGDQWNDLKGEHRGAIRSFKL 248 (275)
T ss_pred Cc--eEEEEECCCHHhccCCCccCcceecC
Confidence 22 12578999999995544222455543
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00031 Score=76.60 Aligned_cols=98 Identities=10% Similarity=0.080 Sum_probs=76.8
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCccc--ceeEecCCCCCC------------------ChH
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYF--QAIVSEEDGMES------------------MAH 261 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~F--d~iv~~e~~~~~------------------KP~ 261 (361)
.+|.+++++.++.|+++|+++..+|+.....+...-+..|+..-- +.++++.+...- .|+
T Consensus 546 Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~ 625 (917)
T COG0474 546 DPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPE 625 (917)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHH
Confidence 488999999999999999999999999999999999999986544 336666542211 255
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEE
Q 018088 262 RFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVG 299 (361)
Q Consensus 262 ~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~ 299 (361)
--..+.+.+.-.-.-|.|.|||.||+.|.+.|-++..+
T Consensus 626 qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIam 663 (917)
T COG0474 626 QKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAM 663 (917)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEe
Confidence 44445555544456788999999999999999988655
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00041 Score=64.00 Aligned_cols=68 Identities=9% Similarity=-0.100 Sum_probs=55.2
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHc-------CCeEEEEeCCCCcccccCcceEeCChhhhHHHHH
Q 018088 257 ESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNC-------TMMAVGLIGAHRAYDLVQADLAVANFNELSVINL 327 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~a-------G~~~v~V~g~~~~~~l~~ad~vi~sl~EL~~~ll 327 (361)
..|...+..+++++++.++++++|||+.+|+.|++.+ |..++.|.. ......|++++++.+++..++.
T Consensus 166 ~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~---g~~~~~A~~~~~~~~~v~~~L~ 240 (244)
T TIGR00685 166 VNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGS---GSKKTVAKFHLTGPQQVLEFLG 240 (244)
T ss_pred CCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEec---CCcCCCceEeCCCHHHHHHHHH
Confidence 3477899999999999999999999999999999999 666666641 1223468999999999877653
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00053 Score=71.18 Aligned_cols=44 Identities=5% Similarity=-0.090 Sum_probs=40.0
Q ss_pred CCCChHHHHHHHHHcCCCCCcEEEE--cCChHHHHHHHHcCCeEEE
Q 018088 256 MESMAHRFLSAAVKLDRKPSKCVVF--EDDPRAITAAHNCTMMAVG 299 (361)
Q Consensus 256 ~~~KP~~~~~~~~klgi~p~~~v~I--GDs~~Di~aA~~aG~~~v~ 299 (361)
...|...+..+++.+++..+++++| ||+.||+.|.+.||.++++
T Consensus 611 gvdKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~gVAM 656 (694)
T PRK14502 611 GNDKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSPILV 656 (694)
T ss_pred CCCHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCceEEE
Confidence 3568999999999999999999999 9999999999999998665
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00048 Score=71.92 Aligned_cols=98 Identities=9% Similarity=0.101 Sum_probs=78.5
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccc----eeEecCCCCCC------------------C
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQ----AIVSEEDGMES------------------M 259 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd----~iv~~e~~~~~------------------K 259 (361)
.+|.|++++.++.|++.|+++..+|+.+...+....+++|+...-+ ..+++.+...- .
T Consensus 583 DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~ 662 (972)
T KOG0202|consen 583 DPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAE 662 (972)
T ss_pred CCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEecC
Confidence 3789999999999999999999999999999999999999765444 45555443221 2
Q ss_pred hHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEE
Q 018088 260 AHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVG 299 (361)
Q Consensus 260 P~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~ 299 (361)
|.--.++.+.|+-.-+=|-|-||+.||..+.|.|-++.++
T Consensus 663 P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAM 702 (972)
T KOG0202|consen 663 PQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAM 702 (972)
T ss_pred chhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceee
Confidence 4445666777766667788999999999999999988765
|
|
| >TIGR01658 EYA-cons_domain eyes absent protein conserved domain | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0076 Score=54.76 Aligned_cols=76 Identities=13% Similarity=0.031 Sum_probs=58.2
Q ss_pred EEEeCCCHHHHHHHHHh--CCCCccc--ceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEE
Q 018088 223 AVVSGLDRRKMVEALER--MGLLKYF--QAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAV 298 (361)
Q Consensus 223 aivSn~~~~~~~~~L~~--lgl~~~F--d~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v 298 (361)
++||++. .+..+.+. +||..+| +.|+++-. .+|..+|+++.+++|-+...-++|||+...-.+|+..+++.+
T Consensus 179 vLVTs~q--LVPaLaKcLLy~L~~~f~ieNIYSa~k--vGK~~cFe~I~~Rfg~p~~~f~~IGDG~eEe~aAk~l~wPFw 254 (274)
T TIGR01658 179 VLVTSGQ--LIPSLAKCLLFRLDTIFRIENVYSSIK--VGKLQCFKWIKERFGHPKVRFCAIGDGWEECTAAQAMNWPFV 254 (274)
T ss_pred EEEEcCc--cHHHHHHHHHhccCCccccccccchhh--cchHHHHHHHHHHhCCCCceEEEeCCChhHHHHHHhcCCCeE
Confidence 5666663 33333333 4676666 45666644 579999999999999988999999999999999999999988
Q ss_pred EEeC
Q 018088 299 GLIG 302 (361)
Q Consensus 299 ~V~g 302 (361)
-|..
T Consensus 255 ~I~~ 258 (274)
T TIGR01658 255 KIDL 258 (274)
T ss_pred Eeec
Confidence 7743
|
This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences. |
| >COG3700 AphA Acid phosphatase (class B) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.00053 Score=59.08 Aligned_cols=91 Identities=13% Similarity=0.128 Sum_probs=61.8
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHH---H-HHHhCCCCcccceeEecCCCCCCChHHH--HHHHHHcCCCCCc
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMV---E-ALERMGLLKYFQAIVSEEDGMESMAHRF--LSAAVKLDRKPSK 276 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~---~-~L~~lgl~~~Fd~iv~~e~~~~~KP~~~--~~~~~klgi~p~~ 276 (361)
-|.+-+++++....++|-.++++|+..+-.++ . +.+.+.+....-.++.++- +||.-| -.++..-++
T Consensus 114 IPKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv~f~Gdk---~k~~qy~Kt~~i~~~~~---- 186 (237)
T COG3700 114 IPKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPVIFAGDK---PKPGQYTKTQWIQDKNI---- 186 (237)
T ss_pred chHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCcceeeccCC---CCcccccccHHHHhcCc----
Confidence 45666788999999999999999986443332 2 2334566555555666543 344322 123444444
Q ss_pred EEEEcCChHHHHHHHHcCCeEEEE
Q 018088 277 CVVFEDDPRAITAAHNCTMMAVGL 300 (361)
Q Consensus 277 ~v~IGDs~~Di~aA~~aG~~~v~V 300 (361)
-|+.|||-+|+.+|+.||+..|-+
T Consensus 187 ~IhYGDSD~Di~AAkeaG~RgIRi 210 (237)
T COG3700 187 RIHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred eEEecCCchhhhHHHhcCccceeE
Confidence 589999999999999999998855
|
|
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0066 Score=61.67 Aligned_cols=112 Identities=8% Similarity=0.018 Sum_probs=67.3
Q ss_pred cCCChHHHHHHHHHHHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHh-CCCCccc--------
Q 018088 176 WGKEESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALER-MGLLKYF-------- 246 (361)
Q Consensus 176 ~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~-lgl~~~F-------- 246 (361)
.+....+++....++...+... .+.|.+.+.+ +++|. .+|+|.+++.+++...+. +|++...
T Consensus 88 ~G~~~~el~~~~r~~l~~f~~~-----~l~~~a~~~~---~~~g~-~vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~ 158 (497)
T PLN02177 88 AGLKIRDIELVSRSVLPKFYAE-----DVHPETWRVF---NSFGK-RYIITASPRIMVEPFVKTFLGADKVLGTELEVSK 158 (497)
T ss_pred cCCCHHHHHHHHHHHHHHHHHH-----hcCHHHHHHH---HhCCC-EEEEECCcHHHHHHHHHHcCCCCEEEecccEECc
Confidence 3556666655554443333322 2566666554 45664 499999999999999976 7885331
Q ss_pred ceeEecCCCCC---CChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeE
Q 018088 247 QAIVSEEDGME---SMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMA 297 (361)
Q Consensus 247 d~iv~~e~~~~---~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~ 297 (361)
++.+++.-.+. .-.+-...+.+.+|.+... ++.||+.+|..+...|+-..
T Consensus 159 ~G~~TG~i~g~~~c~Ge~Kv~rl~~~~g~~~~~-~aYgDS~sD~plL~~a~e~y 211 (497)
T PLN02177 159 SGRATGFMKKPGVLVGDHKRDAVLKEFGDALPD-LGLGDRETDHDFMSICKEGY 211 (497)
T ss_pred CCEEeeeecCCCCCccHHHHHHHHHHhCCCCce-EEEECCccHHHHHHhCCccE
Confidence 33333332111 1011222233556654444 89999999999999999663
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.002 Score=51.07 Aligned_cols=86 Identities=17% Similarity=0.222 Sum_probs=57.8
Q ss_pred CCCCCccHHHHHHHHhhCCCcEEEEeCCC---HHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcE
Q 018088 201 VTEPMEGLQEWLDAVSSARIPCAVVSGLD---RRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKC 277 (361)
Q Consensus 201 ~~~~~pgv~elL~~L~~~Gi~vaivSn~~---~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~ 277 (361)
...++||+.++|+.|+++|.+++++||+. +......|+.+|+.--.+.++++ .......+++. ....++
T Consensus 12 g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~i~ts-------~~~~~~~l~~~-~~~~~v 83 (101)
T PF13344_consen 12 GNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDEIITS-------GMAAAEYLKEH-KGGKKV 83 (101)
T ss_dssp TTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGGEEEH-------HHHHHHHHHHH-TTSSEE
T ss_pred CCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCEEECh-------HHHHHHHHHhc-CCCCEE
Confidence 34689999999999999999999999975 35566667888987555667766 33344444432 335778
Q ss_pred EEEcCChHHHHHHHHcCC
Q 018088 278 VVFEDDPRAITAAHNCTM 295 (361)
Q Consensus 278 v~IGDs~~Di~aA~~aG~ 295 (361)
.++|-. ...+.++.+|+
T Consensus 84 ~vlG~~-~l~~~l~~~G~ 100 (101)
T PF13344_consen 84 YVLGSD-GLREELREAGF 100 (101)
T ss_dssp EEES-H-HHHHHHHHTTE
T ss_pred EEEcCH-HHHHHHHHcCC
Confidence 888865 45666676664
|
... |
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.002 Score=65.71 Aligned_cols=97 Identities=12% Similarity=0.132 Sum_probs=74.0
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcC
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFED 282 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGD 282 (361)
++.|++.+.++.|++.|+++.++|+.....+...-+.+|+ + + .-.|+--..+.+++.-....+.|+||
T Consensus 347 ~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi-------~-~----~~~p~~K~~~v~~l~~~g~~v~~vGD 414 (499)
T TIGR01494 347 PLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI-------F-A----RVTPEEKAALVEALQKKGRVVAMTGD 414 (499)
T ss_pred CCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc-------e-e----ccCHHHHHHHHHHHHHCCCEEEEECC
Confidence 6799999999999999999999999999999999999986 1 1 23455333444444333367999999
Q ss_pred ChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCC
Q 018088 283 DPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVAN 318 (361)
Q Consensus 283 s~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~s 318 (361)
+.||..+.+.|+++... + ....+|+++.+
T Consensus 415 g~nD~~al~~Advgia~--~-----a~~~adivl~~ 443 (499)
T TIGR01494 415 GVNDAPALKKADVGIAM--G-----AKAAADIVLLD 443 (499)
T ss_pred ChhhHHHHHhCCCcccc--c-----hHHhCCeEEec
Confidence 99999999999977433 2 23347888775
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0012 Score=61.09 Aligned_cols=43 Identities=12% Similarity=0.073 Sum_probs=40.0
Q ss_pred CCChHHHHHHHHHcCCC--CCcEEEEcCChHHHHHHHHcCCeEEE
Q 018088 257 ESMAHRFLSAAVKLDRK--PSKCVVFEDDPRAITAAHNCTMMAVG 299 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~--p~~~v~IGDs~~Di~aA~~aG~~~v~ 299 (361)
..|...+.++++.+|++ ++++++|||+.||+.|.+.+|.++++
T Consensus 175 ~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam 219 (256)
T TIGR01486 175 SDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVV 219 (256)
T ss_pred CCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEe
Confidence 45888999999999999 99999999999999999999999776
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.003 Score=59.38 Aligned_cols=43 Identities=12% Similarity=-0.038 Sum_probs=32.9
Q ss_pred CCChHHHHHHHHHcCCC--CCcEEEEcCChHHHHHHHHcCCeEEE
Q 018088 257 ESMAHRFLSAAVKLDRK--PSKCVVFEDDPRAITAAHNCTMMAVG 299 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~--p~~~v~IGDs~~Di~aA~~aG~~~v~ 299 (361)
..|......+.+.+... +-.+|.+|||+||+.|.+.+-..+|.
T Consensus 207 ~dKg~A~~~L~~~y~~~~~~~~tiaLGDspND~~mLe~~D~~vvi 251 (302)
T PRK12702 207 LPGEQAVQLLLDCYQRHLGPIKALGIGCSPPDLAFLRWSEQKVVL 251 (302)
T ss_pred CCHHHHHHHHHHHHHhccCCceEEEecCChhhHHHHHhCCeeEEe
Confidence 35666666666666543 45899999999999999999988654
|
|
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0029 Score=70.25 Aligned_cols=41 Identities=15% Similarity=0.226 Sum_probs=38.9
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCC
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLL 243 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~ 243 (361)
++.|++.+.++.|+++|+++.++|+.....+....+..|+.
T Consensus 656 ~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii 696 (1054)
T TIGR01657 656 PLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIV 696 (1054)
T ss_pred CCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC
Confidence 68999999999999999999999999999999999999984
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.017 Score=61.82 Aligned_cols=64 Identities=9% Similarity=0.008 Sum_probs=48.6
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCC--eEEEEeCCCCcccccCcceEeCChhhhHHHHH
Q 018088 257 ESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTM--MAVGLIGAHRAYDLVQADLAVANFNELSVINL 327 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~--~~v~V~g~~~~~~l~~ad~vi~sl~EL~~~ll 327 (361)
..|...+..+++ ++.++.+++|||+.||+.|.+.++. .+|.| |. ....|++++++.+|+..++.
T Consensus 656 vnKG~al~~ll~--~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~v-G~----~~s~A~~~l~~~~eV~~~L~ 721 (726)
T PRK14501 656 VNKGRAVRRLLE--AGPYDFVLAIGDDTTDEDMFRALPETAITVKV-GP----GESRARYRLPSQREVRELLR 721 (726)
T ss_pred CCHHHHHHHHHh--cCCCCEEEEECCCCChHHHHHhcccCceEEEE-CC----CCCcceEeCCCHHHHHHHHH
Confidence 357888888888 7888999999999999999999853 23443 32 12468899999999766543
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.00055 Score=60.98 Aligned_cols=42 Identities=10% Similarity=0.077 Sum_probs=39.2
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEE
Q 018088 257 ESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAV 298 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v 298 (361)
..|+..+..+++++++++++|++|||+.||+.|++.+|++++
T Consensus 162 ~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~va 203 (204)
T TIGR01484 162 VDKGSALQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAVA 203 (204)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCceE
Confidence 458999999999999999999999999999999999998865
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >COG4996 Predicted phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.003 Score=51.79 Aligned_cols=84 Identities=21% Similarity=0.184 Sum_probs=65.6
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHH------HHcCCCCC
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAA------VKLDRKPS 275 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~------~klgi~p~ 275 (361)
..++|.++++++.++..|+-+..+|=++...+..+|..+++..||+.++...- ..|--++.+++ ....+.|+
T Consensus 40 v~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~~~yFhy~ViePh--P~K~~ML~~llr~i~~er~~~ikP~ 117 (164)
T COG4996 40 VHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDLLQYFHYIVIEPH--PYKFLMLSQLLREINTERNQKIKPS 117 (164)
T ss_pred EEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhchhhhEEEEEecCC--ChhHHHHHHHHHHHHHhhccccCcc
Confidence 47899999999999999999999999899999999999999999999887522 12322332222 23356899
Q ss_pred cEEEEcCChHHH
Q 018088 276 KCVVFEDDPRAI 287 (361)
Q Consensus 276 ~~v~IGDs~~Di 287 (361)
++++++|..--+
T Consensus 118 ~Ivy~DDR~iH~ 129 (164)
T COG4996 118 EIVYLDDRRIHF 129 (164)
T ss_pred eEEEEecccccH
Confidence 999999976433
|
|
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0036 Score=56.15 Aligned_cols=120 Identities=16% Similarity=0.099 Sum_probs=78.3
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCC-c-------cccee-------------------EecC-
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLL-K-------YFQAI-------------------VSEE- 253 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~-~-------~Fd~i-------------------v~~e- 253 (361)
.++.||+.+.++.|... +.-.|+|.+-+.++.+....+|+- . -+|.+ +.++
T Consensus 82 a~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~gee 160 (315)
T COG4030 82 AKLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEE 160 (315)
T ss_pred cccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHH
Confidence 47899999999999887 788888888888888888877661 0 01210 0111
Q ss_pred -------------------------CCCCC-ChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCC-eEEEEeCCCCc
Q 018088 254 -------------------------DGMES-MAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTM-MAVGLIGAHRA 306 (361)
Q Consensus 254 -------------------------~~~~~-KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~-~~v~V~g~~~~ 306 (361)
.++.+ |..+....++.-+++-+ +++||||..|+.|.+.+.- +.++|.-+++.
T Consensus 161 lfe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~s-a~~VGDSItDv~ml~~~rgrGglAvaFNGNe 239 (315)
T COG4030 161 LFEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFS-AVVVGDSITDVKMLEAARGRGGLAVAFNGNE 239 (315)
T ss_pred HHHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcc-eeEecCcccchHHHHHhhccCceEEEecCCc
Confidence 01111 33445555555555544 8999999999999998743 33555445566
Q ss_pred ccccCcceEeCChhhhH
Q 018088 307 YDLVQADLAVANFNELS 323 (361)
Q Consensus 307 ~~l~~ad~vi~sl~EL~ 323 (361)
+.+..||+.|-+.+-..
T Consensus 240 Yal~eAdVAvisp~~~a 256 (315)
T COG4030 240 YALKEADVAVISPTAMA 256 (315)
T ss_pred ccccccceEEeccchhh
Confidence 67777887766555443
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.022 Score=61.61 Aligned_cols=67 Identities=13% Similarity=0.016 Sum_probs=49.1
Q ss_pred CCChHHHHHHH---HHcCCCCCcEEEEcCChHHHHHHHHcCC-------------eEEEEeCCCCcccccCcceEeCChh
Q 018088 257 ESMAHRFLSAA---VKLDRKPSKCVVFEDDPRAITAAHNCTM-------------MAVGLIGAHRAYDLVQADLAVANFN 320 (361)
Q Consensus 257 ~~KP~~~~~~~---~klgi~p~~~v~IGDs~~Di~aA~~aG~-------------~~v~V~g~~~~~~l~~ad~vi~sl~ 320 (361)
..|...+..++ +.+|+.++.+++|||+.||..|.+.++- -+|-| |. ....|.+.+++.+
T Consensus 761 vnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~V-G~----~~S~A~y~L~d~~ 835 (854)
T PLN02205 761 VSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTV-GQ----KPSKAKYYLDDTA 835 (854)
T ss_pred CCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEE-CC----CCccCeEecCCHH
Confidence 34777777765 4569999999999999999999998862 12222 22 1245789999999
Q ss_pred hhHHHHHH
Q 018088 321 ELSVINLR 328 (361)
Q Consensus 321 EL~~~ll~ 328 (361)
|+..++..
T Consensus 836 eV~~lL~~ 843 (854)
T PLN02205 836 EIVRLMQG 843 (854)
T ss_pred HHHHHHHH
Confidence 99876543
|
|
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0029 Score=69.32 Aligned_cols=60 Identities=17% Similarity=0.293 Sum_probs=41.3
Q ss_pred CCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhhhHHHHHHhhHhcCCCC
Q 018088 273 KPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNELSVINLRRLFANKGST 337 (361)
Q Consensus 273 ~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~EL~~~ll~~l~~~~~~~ 337 (361)
.+..+++|||+.||+.|.+.|.++ |||.|..-.+....+|+.|.-+.=|..+ |+=.++|.
T Consensus 793 ~~~~TLAIGDGANDVsMIQ~AhVG-VGIsG~EGmQAvmsSD~AIaqFrfL~rL----LLVHGhW~ 852 (1151)
T KOG0206|consen 793 LKAVTLAIGDGANDVSMIQEAHVG-VGISGQEGMQAVMSSDFAIAQFRFLERL----LLVHGHWS 852 (1151)
T ss_pred CCceEEEeeCCCccchheeeCCcC-eeeccchhhhhhhcccchHHHHHHHhhh----heeeccee
Confidence 346799999999999999998876 6665654444445578887776655443 44444443
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0065 Score=60.50 Aligned_cols=44 Identities=14% Similarity=0.095 Sum_probs=38.6
Q ss_pred CCChHHHHHHHHHc---CCCCCcEEEEcCChHHHHHHHHcCCeEEEE
Q 018088 257 ESMAHRFLSAAVKL---DRKPSKCVVFEDDPRAITAAHNCTMMAVGL 300 (361)
Q Consensus 257 ~~KP~~~~~~~~kl---gi~p~~~v~IGDs~~Di~aA~~aG~~~v~V 300 (361)
..|...+.++++++ |++++++++|||+.||++|.+.+|...|++
T Consensus 174 ~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam 220 (413)
T PLN02382 174 AGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMV 220 (413)
T ss_pred CCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEE
Confidence 45889999999999 999999999999999999999999533444
|
|
| >KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.028 Score=53.54 Aligned_cols=98 Identities=8% Similarity=0.065 Sum_probs=73.5
Q ss_pred CCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhC---CCCcccceeEecCCCC-----CCCh---------------
Q 018088 204 PMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERM---GLLKYFQAIVSEEDGM-----ESMA--------------- 260 (361)
Q Consensus 204 ~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~l---gl~~~Fd~iv~~e~~~-----~~KP--------------- 260 (361)
-.|....+|+.|+++|-++.++||++..++..-+..+ ...++||.++.-.+-+ ..+|
T Consensus 241 r~~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvqA~KP~Fftde~rPfR~~dek~~sl~wdk 320 (510)
T KOG2470|consen 241 RNPQLLAFLRKLKDHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQANKPEFFTDERRPFRKYDEKRGSLLWDK 320 (510)
T ss_pred ccHHHHHHHHHHHHhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEEecCCCcccccccCcchhhcccccchhhhh
Confidence 4667889999999999999999999999988888776 3456788776542211 1111
Q ss_pred ------------HHHHHHHHHcCCCCCcEEEEcCChH-HHHHHH-HcCCeEEEEe
Q 018088 261 ------------HRFLSAAVKLDRKPSKCVVFEDDPR-AITAAH-NCTMMAVGLI 301 (361)
Q Consensus 261 ------------~~~~~~~~klgi~p~~~v~IGDs~~-Di~aA~-~aG~~~v~V~ 301 (361)
..+...++--|....+|++|||..- |+.... .+|+.+.++.
T Consensus 321 v~klekgkiYy~G~l~~flelt~WrG~~VlYFGDHlySDLad~tlkhgWRTgAII 375 (510)
T KOG2470|consen 321 VDKLEKGKIYYQGNLKSFLELTGWRGPRVLYFGDHLYSDLADLTLKHGWRTGAII 375 (510)
T ss_pred hhhcccCceeeeccHHHHHHHhccCCCeeEEecCcchhhhhhhHhhcccccccch
Confidence 0245566666788889999999976 988877 8999887764
|
|
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.0073 Score=56.15 Aligned_cols=49 Identities=18% Similarity=0.319 Sum_probs=39.1
Q ss_pred CCccHHHHHHHHhhCCCcEEEEeCCCHH---HHHHHHHhCCCCcccceeEec
Q 018088 204 PMEGLQEWLDAVSSARIPCAVVSGLDRR---KMVEALERMGLLKYFQAIVSE 252 (361)
Q Consensus 204 ~~pgv~elL~~L~~~Gi~vaivSn~~~~---~~~~~L~~lgl~~~Fd~iv~~ 252 (361)
+.||+.++|+.|+++|++++++||.... .....++.+|+.--.+.++++
T Consensus 22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~~~~~i~ts 73 (257)
T TIGR01458 22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDISEDEVFTP 73 (257)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCCCHHHeEcH
Confidence 6889999999999999999999996544 477778888886444556665
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.013 Score=54.56 Aligned_cols=49 Identities=16% Similarity=0.184 Sum_probs=44.5
Q ss_pred CccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecC
Q 018088 205 MEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEE 253 (361)
Q Consensus 205 ~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e 253 (361)
.|.+.+.|.+|++.|.-+++=|.|.++.+...++.++|.++||.++++.
T Consensus 144 ~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~~~L~~~Fd~ii~~G 192 (297)
T PF05152_consen 144 DPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKELKLEGYFDIIICGG 192 (297)
T ss_pred ChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHhCCccccEEEEeCC
Confidence 5666778889999999899999999999999999999999999999875
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.0042 Score=61.90 Aligned_cols=91 Identities=11% Similarity=0.100 Sum_probs=77.7
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcC
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFED 282 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGD 282 (361)
...||.+|-+.+|++-|++.+.+|+.++-.....-+..|++++.. +.||+--....++.+-.-.=+-|.||
T Consensus 447 ivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDdfiA---------eatPEdK~~~I~~eQ~~grlVAMtGD 517 (681)
T COG2216 447 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFIA---------EATPEDKLALIRQEQAEGRLVAMTGD 517 (681)
T ss_pred hcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchhhhh---------cCChHHHHHHHHHHHhcCcEEEEcCC
Confidence 358999999999999999999999999999999999999987654 46888777777777777777889999
Q ss_pred ChHHHHHHHHcCCeEEEEeC
Q 018088 283 DPRAITAAHNCTMMAVGLIG 302 (361)
Q Consensus 283 s~~Di~aA~~aG~~~v~V~g 302 (361)
+.||..+...|..+.++-.|
T Consensus 518 GTNDAPALAqAdVg~AMNsG 537 (681)
T COG2216 518 GTNDAPALAQADVGVAMNSG 537 (681)
T ss_pred CCCcchhhhhcchhhhhccc
Confidence 99999999999877666433
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.011 Score=55.22 Aligned_cols=66 Identities=12% Similarity=-0.009 Sum_probs=53.0
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHc----CCeEEEEeCCCCcccccCcceEeCChhhhHHHHHH
Q 018088 257 ESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNC----TMMAVGLIGAHRAYDLVQADLAVANFNELSVINLR 328 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~a----G~~~v~V~g~~~~~~l~~ad~vi~sl~EL~~~ll~ 328 (361)
..|...+.++++.+|+..+++++|||+.||+.|.+.+ |.. |.| |... ..|.+.+++..++..++-.
T Consensus 173 ~~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~-vav-g~a~----~~A~~~l~~~~~v~~~L~~ 242 (266)
T PRK10187 173 TNKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGIS-VKV-GTGA----TQASWRLAGVPDVWSWLEM 242 (266)
T ss_pred CCHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHhcCCeE-EEE-CCCC----CcCeEeCCCHHHHHHHHHH
Confidence 3578899999999999999999999999999999988 544 444 3221 4488999999999876544
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.022 Score=53.52 Aligned_cols=89 Identities=15% Similarity=0.142 Sum_probs=62.9
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCC---HHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEE
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLD---RRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCV 278 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~---~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v 278 (361)
..++||+.++|+.|+++|++++++||+. +......++.+|+....+.++++ .......+++......+++
T Consensus 17 ~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~~i~ts-------~~~~~~~l~~~~~~~~~v~ 89 (279)
T TIGR01452 17 ERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAEQLFSS-------ALCAARLLRQPPDAPKAVY 89 (279)
T ss_pred CeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEecH-------HHHHHHHHHhhCcCCCEEE
Confidence 3579999999999999999999999964 44555677888886544555554 2334444555444567899
Q ss_pred EEcCChHHHHHHHHcCCeEE
Q 018088 279 VFEDDPRAITAAHNCTMMAV 298 (361)
Q Consensus 279 ~IGDs~~Di~aA~~aG~~~v 298 (361)
++|+.. ....++..|+..+
T Consensus 90 ~iG~~~-~~~~l~~~g~~~~ 108 (279)
T TIGR01452 90 VIGEEG-LRAELDAAGIRLA 108 (279)
T ss_pred EEcCHH-HHHHHHHCCCEEe
Confidence 999853 3456677888754
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.043 Score=47.03 Aligned_cols=92 Identities=8% Similarity=0.051 Sum_probs=58.6
Q ss_pred CCccHHHHHHHHhhCCCcEEEEeCCCH---HHHHHHHHhC---CCCcccce-eEec---------CCCCCCChHHHHH--
Q 018088 204 PMEGLQEWLDAVSSARIPCAVVSGLDR---RKMVEALERM---GLLKYFQA-IVSE---------EDGMESMAHRFLS-- 265 (361)
Q Consensus 204 ~~pgv~elL~~L~~~Gi~vaivSn~~~---~~~~~~L~~l---gl~~~Fd~-iv~~---------e~~~~~KP~~~~~-- 265 (361)
..+|+.++.+.++++||++..+|+.+. ...+..|+.. |. .+.++ ++.+ .++...+|+.|+.
T Consensus 28 ~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~-~lP~Gpv~~sP~~l~~al~rEvi~~~p~~fK~~~ 106 (157)
T PF08235_consen 28 THPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGH-NLPDGPVLLSPDSLFSALHREVISKDPEEFKIAC 106 (157)
T ss_pred hhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCc-cCCCCCEEECCcchhhhhhccccccChHHHHHHH
Confidence 478999999999999999999999763 3344445544 21 22232 3333 1343456764433
Q ss_pred ---HHHHcCCCCC-cEEEEcCChHHHHHHHHcCCe
Q 018088 266 ---AAVKLDRKPS-KCVVFEDDPRAITAAHNCTMM 296 (361)
Q Consensus 266 ---~~~klgi~p~-~~v~IGDs~~Di~aA~~aG~~ 296 (361)
+...+.-... =...+|+..+|+.+=+++|+.
T Consensus 107 L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 107 LRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred HHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 3333321122 245799999999999999996
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.0031 Score=53.91 Aligned_cols=83 Identities=19% Similarity=0.277 Sum_probs=61.1
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCC-CcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEE
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGL-LKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVF 280 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl-~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~I 280 (361)
..+.||+.++|+.+.+. +.++|.|.+...++..+++.+.- ..+|+.++..+.....+... .+-++++|.+++++|+|
T Consensus 35 v~~RP~l~~FL~~l~~~-~ev~i~T~~~~~ya~~v~~~ldp~~~~~~~~~~r~~~~~~~~~~-~KdL~~l~~~~~~vviv 112 (159)
T PF03031_consen 35 VKLRPGLDEFLEELSKH-YEVVIWTSASEEYAEPVLDALDPNGKLFSRRLYRDDCTFDKGSY-IKDLSKLGRDLDNVVIV 112 (159)
T ss_dssp EEE-TTHHHHHHHHHHH-CEEEEE-SS-HHHHHHHHHHHTTTTSSEEEEEEGGGSEEETTEE-E--GGGSSS-GGGEEEE
T ss_pred EeeCchHHHHHHHHHHh-ceEEEEEeehhhhhhHHHHhhhhhcccccccccccccccccccc-ccchHHHhhccccEEEE
Confidence 36799999999999777 99999999999999999999987 56889888877653222111 25667778889999999
Q ss_pred cCChHH
Q 018088 281 EDDPRA 286 (361)
Q Consensus 281 GDs~~D 286 (361)
+|++.-
T Consensus 113 DD~~~~ 118 (159)
T PF03031_consen 113 DDSPRK 118 (159)
T ss_dssp ES-GGG
T ss_pred eCCHHH
Confidence 999974
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
| >TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245 | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.029 Score=49.89 Aligned_cols=91 Identities=12% Similarity=0.135 Sum_probs=58.9
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcc--cc--eeEecC---------CCC-CCChHHHHHHHH
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKY--FQ--AIVSEE---------DGM-ESMAHRFLSAAV 268 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~--Fd--~iv~~e---------~~~-~~KP~~~~~~~~ 268 (361)
...|++.++|+.+.+. +.++|-|.+...++..+++.+|+... +. .+.... ... .-|+ +..+-.
T Consensus 45 ~kRP~l~eFL~~~~~~-feIvVwTAa~~~ya~~~l~~l~~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKd--L~~lw~ 121 (195)
T TIGR02245 45 LMRPYLHEFLTSAYED-YDIVIWSATSMKWIEIKMTELGVLTNPNYKITFLLDSTAMITVHTPRRGKFDVKP--LGVIWA 121 (195)
T ss_pred EeCCCHHHHHHHHHhC-CEEEEEecCCHHHHHHHHHHhcccCCccceEEEEeccccceeeEeeccCcEEEee--cHHhhh
Confidence 3599999999999996 99999999999999999999876321 11 111111 110 1233 222223
Q ss_pred HcC--CCCCcEEEEcCChHHHHHHHHcCCe
Q 018088 269 KLD--RKPSKCVVFEDDPRAITAAHNCTMM 296 (361)
Q Consensus 269 klg--i~p~~~v~IGDs~~Di~aA~~aG~~ 296 (361)
+++ .+.+++|+|.|++.-..+==..|+.
T Consensus 122 ~l~~~~~~~ntiiVDd~p~~~~~~P~N~i~ 151 (195)
T TIGR02245 122 LLPEFYSMKNTIMFDDLRRNFLMNPQNGLK 151 (195)
T ss_pred hcccCCCcccEEEEeCCHHHHhcCCCCccc
Confidence 554 3779999999999753332223443
|
This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD. |
| >COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.028 Score=46.82 Aligned_cols=107 Identities=13% Similarity=0.097 Sum_probs=70.5
Q ss_pred CCCCCccHHHHHHHHhhCCCcEEEEeCC------CHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCC
Q 018088 201 VTEPMEGLQEWLDAVSSARIPCAVVSGL------DRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKP 274 (361)
Q Consensus 201 ~~~~~pgv~elL~~L~~~Gi~vaivSn~------~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p 274 (361)
....+|++++.+++|-+. +.++|+|.. ...-.+++.+.+..-.+-..++|+.- |+ .
T Consensus 66 nL~V~p~aq~v~keLt~~-y~vYivtaamdhp~s~~dK~eWl~E~FPFi~~qn~vfCgnK----------------ni-v 127 (180)
T COG4502 66 NLGVQPFAQTVLKELTSI-YNVYIVTAAMDHPKSCEDKGEWLKEKFPFISYQNIVFCGNK----------------NI-V 127 (180)
T ss_pred hcCccccHHHHHHHHHhh-heEEEEEeccCCchhHHHHHHHHHHHCCCCChhhEEEecCC----------------Ce-E
Confidence 347899999999999988 999999975 23445566666666555556777632 11 0
Q ss_pred CcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhhhHHHHHHhh
Q 018088 275 SKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNELSVINLRRL 330 (361)
Q Consensus 275 ~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~EL~~~ll~~l 330 (361)
.-=++|+|++..++..+ |++ |.+...|...+ .-...+.++.|....+++.+
T Consensus 128 kaDilIDDnp~nLE~F~--G~k-IlFdA~HN~ne--nRF~Rv~~W~e~eq~ll~~~ 178 (180)
T COG4502 128 KADILIDDNPLNLENFK--GNK-ILFDAHHNKNE--NRFVRVRDWYEAEQALLESL 178 (180)
T ss_pred EeeEEecCCchhhhhcc--Cce-EEEecccccCc--cceeeeccHHHHHHHHHHhh
Confidence 11368999998887665 444 44433443322 23467889999988777654
|
|
| >COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.058 Score=53.65 Aligned_cols=84 Identities=19% Similarity=0.214 Sum_probs=67.3
Q ss_pred cHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCC------CCCChHHHHHHHHHcCCCCCcEEEE
Q 018088 207 GLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDG------MESMAHRFLSAAVKLDRKPSKCVVF 280 (361)
Q Consensus 207 gv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~------~~~KP~~~~~~~~klgi~p~~~v~I 280 (361)
..+..+..|++.|+-++|+|-+....+..+...+. |-++..++. ..+|.+-++++++++|+..+..+++
T Consensus 259 ~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~khp-----~MiLkeedfa~~~iNW~~K~eNirkIAkklNlg~dSmvFi 333 (574)
T COG3882 259 TFQNFIKGLKKQGVLLAVCSKNTEKDAKEVFRKHP-----DMILKEEDFAVFQINWDPKAENIRKIAKKLNLGLDSMVFI 333 (574)
T ss_pred HHHHHHHHHHhccEEEEEecCCchhhHHHHHhhCC-----CeEeeHhhhhhheecCCcchhhHHHHHHHhCCCccceEEe
Confidence 34567888999999999999988888888877653 233333321 2468899999999999999999999
Q ss_pred cCChHHHHHHHHcCC
Q 018088 281 EDDPRAITAAHNCTM 295 (361)
Q Consensus 281 GDs~~Di~aA~~aG~ 295 (361)
+|++...+-.++-+-
T Consensus 334 DD~p~ErE~vk~~~~ 348 (574)
T COG3882 334 DDNPAERELVKRELP 348 (574)
T ss_pred cCCHHHHHHHHhcCc
Confidence 999998888888775
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.036 Score=57.21 Aligned_cols=120 Identities=14% Similarity=0.162 Sum_probs=81.5
Q ss_pred CCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHh--CCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEc
Q 018088 204 PMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALER--MGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFE 281 (361)
Q Consensus 204 ~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~--lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IG 281 (361)
-..++..-|..|+.++...-++++..-.......+. ..+......++++--.+..|+++.+.+-++-| .++..||
T Consensus 712 sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~---krvc~IG 788 (1051)
T KOG0210|consen 712 SRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTG---KRVCAIG 788 (1051)
T ss_pred CchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhC---ceEEEEc
Confidence 356777888888888766666677554444333332 13333345677766666678888777777766 6789999
Q ss_pred CChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhhhHHHHH
Q 018088 282 DDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNELSVINL 327 (361)
Q Consensus 282 Ds~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~EL~~~ll 327 (361)
|+-||+.|...|.++ |++.|....+.-..||+.|.-|..+..+++
T Consensus 789 DGGNDVsMIq~A~~G-iGI~gkEGkQASLAADfSItqF~Hv~rLLl 833 (1051)
T KOG0210|consen 789 DGGNDVSMIQAADVG-IGIVGKEGKQASLAADFSITQFSHVSRLLL 833 (1051)
T ss_pred CCCccchheeecccc-eeeecccccccchhccccHHHHHHHHHHhh
Confidence 999999998887655 455455444444568998888887776654
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.043 Score=50.93 Aligned_cols=37 Identities=14% Similarity=0.237 Sum_probs=31.9
Q ss_pred HHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcc
Q 018088 209 QEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKY 245 (361)
Q Consensus 209 ~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~ 245 (361)
.+.|++++++|++++++|+.....+...++.+++..+
T Consensus 25 ~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~ 61 (266)
T PRK10976 25 KETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKSY 61 (266)
T ss_pred HHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCe
Confidence 4667889999999999999999999999999988644
|
|
| >COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.16 E-value=0.064 Score=52.93 Aligned_cols=97 Identities=12% Similarity=0.012 Sum_probs=79.6
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeC--CCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcCCCCCcEE
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSG--LDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDRKPSKCV 278 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn--~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi~p~~~v 278 (361)
.|.....++.+.+.++|-+|+++|. .+...++..|...|.+..--.++.+.+....| .+.|..+++..+++|.+.+
T Consensus 99 ypn~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L~s~g~d~~nipiY~S~e~rl~KnSg~LFk~Vlk~EnVd~~~w~ 178 (635)
T COG5610 99 YPNKKNIELVEEAIKNEKRVILISDMYLPSSILRTFLNSFGPDFNNIPIYMSSEFRLKKNSGNLFKAVLKLENVDPKKWI 178 (635)
T ss_pred eccccchHHHHHHHhCCCeEEEEecccCcHHHHHHHHHhcCCCccCceeeecceeehhcccchHHHHHHhhcCCChhheE
Confidence 3444566889999999999999998 46778888888888865544466666655555 5799999999999999999
Q ss_pred EEcCChH-HHHHHHHcCCeEEE
Q 018088 279 VFEDDPR-AITAAHNCTMMAVG 299 (361)
Q Consensus 279 ~IGDs~~-Di~aA~~aG~~~v~ 299 (361)
.+||... |..++++.|+.+..
T Consensus 179 H~GDN~~aD~l~pk~LgI~Tlf 200 (635)
T COG5610 179 HCGDNWVADYLKPKNLGISTLF 200 (635)
T ss_pred EecCchhhhhcCccccchhHHH
Confidence 9999876 99999999998764
|
|
| >KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.16 E-value=0.43 Score=46.13 Aligned_cols=77 Identities=18% Similarity=0.107 Sum_probs=51.9
Q ss_pred EEEEeCCCHHHHHHHHHhCCCCccc--ceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEE
Q 018088 222 CAVVSGLDRRKMVEALERMGLLKYF--QAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVG 299 (361)
Q Consensus 222 vaivSn~~~~~~~~~L~~lgl~~~F--d~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~ 299 (361)
-++||+..-.-....+=..||...| ..|++.-. .+|-.+|+++.+++|. ...-|+|||+...-.+|++..|++.-
T Consensus 373 nVlvTttqLipalaKvLL~gLg~~fpiENIYSa~k--iGKescFerI~~RFg~-K~~yvvIgdG~eee~aAK~ln~Pfwr 449 (468)
T KOG3107|consen 373 NVLVTTTQLIPALAKVLLYGLGSSFPIENIYSATK--IGKESCFERIQSRFGR-KVVYVVIGDGVEEEQAAKALNMPFWR 449 (468)
T ss_pred EEEEeccchhHHHHHHHHHhcCCcccchhhhhhhh--ccHHHHHHHHHHHhCC-ceEEEEecCcHHHHHHHHhhCCceEe
Confidence 4566665322222222223554333 55665533 4678899999999998 56678999999999999999998766
Q ss_pred Ee
Q 018088 300 LI 301 (361)
Q Consensus 300 V~ 301 (361)
+.
T Consensus 450 I~ 451 (468)
T KOG3107|consen 450 IS 451 (468)
T ss_pred ec
Confidence 53
|
|
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=94.99 E-value=0.23 Score=45.81 Aligned_cols=98 Identities=12% Similarity=0.141 Sum_probs=66.1
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeC---CCHHHHHHHHHhCCCCcccceeEecCCCC--------CCC------hHHHHH
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSG---LDRRKMVEALERMGLLKYFQAIVSEEDGM--------ESM------AHRFLS 265 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn---~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~--------~~K------P~~~~~ 265 (361)
.+.|++.++|+.|+++|++++++|| .....+...++.+|+....+.++++.... ..+ .+.+..
T Consensus 17 ~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~iit~~~~~~~~l~~~~~~~~v~~lg~~~l~~ 96 (249)
T TIGR01457 17 ERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPATLETVFTASMATADYMNDLKLEKTVYVIGEEGLKE 96 (249)
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEeeHHHHHHHHHHhcCCCCEEEEEcChhHHH
Confidence 5688999999999999999999998 45777888889999987777788764211 111 235667
Q ss_pred HHHHcCCC----CCcEEEEcCCh----HHHHHHH---HcCCeEEEE
Q 018088 266 AAVKLDRK----PSKCVVFEDDP----RAITAAH---NCTMMAVGL 300 (361)
Q Consensus 266 ~~~klgi~----p~~~v~IGDs~----~Di~aA~---~aG~~~v~V 300 (361)
.++..|+. ..+.|++|... .++..|. +.|+..++.
T Consensus 97 ~l~~~g~~~~~~~~~~Vvvg~~~~~~y~~l~~a~~~l~~g~~~i~t 142 (249)
T TIGR01457 97 AIKEAGYVEDKEKPDYVVVGLDRQIDYEKFATATLAIRKGAHFIGT 142 (249)
T ss_pred HHHHcCCEecCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCeEEEE
Confidence 77777753 23567777532 2333222 347775553
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.89 E-value=0.23 Score=52.73 Aligned_cols=117 Identities=15% Similarity=0.172 Sum_probs=76.4
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccc--eeEecCCCCCC------------------ChH
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQ--AIVSEEDGMES------------------MAH 261 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd--~iv~~e~~~~~------------------KP~ 261 (361)
.+..||+.+.++.|+.+|+.+-.||+.+-..++.....-|+...=+ .++.+.+.-.- .|.
T Consensus 646 DPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr~~s~ee~~~i~pkl~VlARSSP~ 725 (1034)
T KOG0204|consen 646 DPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFRELSQEERDKIWPKLRVLARSSPN 725 (1034)
T ss_pred CCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhhhcCHHHHHhhhhhheeeecCCCc
Confidence 3669999999999999999999999999888888888888754433 23333222111 131
Q ss_pred ---HHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEE-EEeCCCCcccccCcceEeC--ChhhhH
Q 018088 262 ---RFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAV-GLIGAHRAYDLVQADLAVA--NFNELS 323 (361)
Q Consensus 262 ---~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v-~V~g~~~~~~l~~ad~vi~--sl~EL~ 323 (361)
.+-+.+.+.| +=+.+-||+.||-.+.+.|-++.+ ++.|. ....+.+|+++- +|.-+.
T Consensus 726 DK~lLVk~L~~~g---~VVAVTGDGTNDaPALkeADVGlAMGIaGT--eVAKEaSDIIi~DDNFssIV 788 (1034)
T KOG0204|consen 726 DKHLLVKGLIKQG---EVVAVTGDGTNDAPALKEADVGLAMGIAGT--EVAKEASDIIILDDNFSSIV 788 (1034)
T ss_pred hHHHHHHHHHhcC---cEEEEecCCCCCchhhhhcccchhccccch--hhhhhhCCeEEEcCchHHHH
Confidence 2333333222 234577999999999999998865 44332 223345676653 454443
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=93.83 E-value=0.15 Score=46.98 Aligned_cols=28 Identities=7% Similarity=0.011 Sum_probs=21.9
Q ss_pred CCcEEEEcC----ChHHHHHHHHcCCeEEEEe
Q 018088 274 PSKCVVFED----DPRAITAAHNCTMMAVGLI 301 (361)
Q Consensus 274 p~~~v~IGD----s~~Di~aA~~aG~~~v~V~ 301 (361)
++++++||| +.||++|.+.++...++|.
T Consensus 200 ~~eviafGD~~~~~~NDieMl~~~~~~g~~v~ 231 (247)
T PTZ00174 200 FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK 231 (247)
T ss_pred hhhEEEEcccCCCCCCcHhhhhcCCCceEEeC
Confidence 478888888 7888888888777666664
|
|
| >COG5663 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=93.82 E-value=0.19 Score=43.16 Aligned_cols=115 Identities=11% Similarity=0.011 Sum_probs=71.2
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHH---HHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEE
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEA---LERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVV 279 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~---L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~ 279 (361)
....++...|..++++ .+++.+|...+...... +..-.+ .+|.+.-.+- ..| ..+++.++++ ++
T Consensus 72 l~~q~v~~~L~~~~e~-~~L~~itar~~dl~~iT~~~l~~q~i--h~~~l~i~g~--h~K----V~~vrth~id----lf 138 (194)
T COG5663 72 LLAQLVKQVLPSLKEE-HRLIYITARKADLTRITYAWLFIQNI--HYDHLEIVGL--HHK----VEAVRTHNID----LF 138 (194)
T ss_pred HHHHHHHHHhHHHHhh-ceeeeeehhhHHHHHHHHHHHHHhcc--chhhhhhhcc--ccc----chhhHhhccC----cc
Confidence 4466788888888887 68888887644443332 332222 3344322211 234 2355666664 78
Q ss_pred EcCChH-HHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhhhHHHHHHhh
Q 018088 280 FEDDPR-AITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNELSVINLRRL 330 (361)
Q Consensus 280 IGDs~~-Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~EL~~~ll~~l 330 (361)
++|+.. -++.|+++|++++.+..+.......++-..+.++.|...++-+++
T Consensus 139 ~ed~~~na~~iAk~~~~~vilins~ynRkp~~~niiR~~~w~e~y~~vd~~~ 190 (194)
T COG5663 139 FEDSHDNAGQIAKNAGIPVILINSPYNRKPAAKNIIRANNWAEAYEWVDSRL 190 (194)
T ss_pred ccccCchHHHHHHhcCCcEEEecCcccccchHHHHHHHHhHHHHHHHHHHHh
Confidence 999864 688889999999998665555544445555667777776655443
|
|
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.69 E-value=0.63 Score=43.02 Aligned_cols=83 Identities=8% Similarity=0.129 Sum_probs=53.7
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHH---HHHHHHhCCCCcccceeEecCCC--------CCCC-----hHHHHHH
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRK---MVEALERMGLLKYFQAIVSEEDG--------MESM-----AHRFLSA 266 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~---~~~~L~~lgl~~~Fd~iv~~e~~--------~~~K-----P~~~~~~ 266 (361)
.+.||+.++++.|+++|.+++++||..... ....|+.+|+.---+.++++... ...+ ...+...
T Consensus 17 ~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~~~~i~ts~~~~~~~L~~~~~~~v~~~g~~~l~~~ 96 (248)
T PRK10444 17 VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTSAMATADFLRRQEGKKAYVIGEGALIHE 96 (248)
T ss_pred eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHhhEecHHHHHHHHHHhCCCCEEEEEcCHHHHHH
Confidence 679999999999999999999999976544 45556667875444566665211 0111 1234455
Q ss_pred HHHcCCC----CCcEEEEcCChH
Q 018088 267 AVKLDRK----PSKCVVFEDDPR 285 (361)
Q Consensus 267 ~~klgi~----p~~~v~IGDs~~ 285 (361)
++..|+. ..++|++|...+
T Consensus 97 l~~~g~~~~~~~~~~Vvvg~~~~ 119 (248)
T PRK10444 97 LYKAGFTITDINPDFVIVGETRS 119 (248)
T ss_pred HHHCcCEecCCCCCEEEEeCCCC
Confidence 5555543 235777776554
|
|
| >KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.41 E-value=0.84 Score=38.75 Aligned_cols=90 Identities=12% Similarity=-0.009 Sum_probs=55.5
Q ss_pred CCccHHHHHHHHhhC-C-CcEEEEeCCC--------HHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHc-C-
Q 018088 204 PMEGLQEWLDAVSSA-R-IPCAVVSGLD--------RRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKL-D- 271 (361)
Q Consensus 204 ~~pgv~elL~~L~~~-G-i~vaivSn~~--------~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~kl-g- 271 (361)
+.|....-+++++.. | ..++++||+. ...+..+-+..|+-- +--+ ..||.+-.+..+.+ |
T Consensus 62 Iwp~~l~~ie~~~~vygek~i~v~SNsaG~~~~D~d~s~Ak~le~k~gIpV----lRHs----~kKP~ct~E~~~y~~~N 133 (190)
T KOG2961|consen 62 IWPPLLPSIERCKAVYGEKDIAVFSNSAGLTEYDHDDSKAKALEAKIGIPV----LRHS----VKKPACTAEEVEYHFGN 133 (190)
T ss_pred cCchhHHHHHHHHHHhCcccEEEEecCcCccccCCchHHHHHHHHhhCCce----Eeec----ccCCCccHHHHHHHhCC
Confidence 445555555555542 3 5688999842 122333333345521 1111 24676555554443 3
Q ss_pred ---CCCCcEEEEcCChH-HHHHHHHcCCeEEEEe
Q 018088 272 ---RKPSKCVVFEDDPR-AITAAHNCTMMAVGLI 301 (361)
Q Consensus 272 ---i~p~~~v~IGDs~~-Di~aA~~aG~~~v~V~ 301 (361)
..+++++||||..- ||.+|...|...||+.
T Consensus 134 shv~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~ 167 (190)
T KOG2961|consen 134 SHVCTSSELIMVGDRLFTDIVYANRMGSLGVWTE 167 (190)
T ss_pred cccCChhHeEEEccchhhhHhhhhhccceeEEec
Confidence 57999999999986 9999999999999974
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=92.96 E-value=0.093 Score=48.35 Aligned_cols=35 Identities=20% Similarity=0.168 Sum_probs=22.2
Q ss_pred CCceEEEEece-eccccHHHHHHHHHHHH---HHhCCCC
Q 018088 117 DEAYGLIFSWD-VVADTRALKLNAWKQLA---FEEGKEI 151 (361)
Q Consensus 117 ~~~k~VIFDlD-TL~ds~~~~~~a~~~~l---~~~G~~~ 151 (361)
+++|+|+||+| ||+++...+.+...+++ .+.|+.+
T Consensus 3 ~~~klia~DlDGTLL~~~~~is~~~~~ai~~l~~~Gi~~ 41 (247)
T PTZ00174 3 MKKTILLFDVDGTLTKPRNPITQEMKDTLAKLKSKGFKI 41 (247)
T ss_pred CCCeEEEEECcCCCcCCCCCCCHHHHHHHHHHHHCCCEE
Confidence 45899999999 99987653333333333 3345543
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=92.64 E-value=0.45 Score=46.80 Aligned_cols=69 Identities=9% Similarity=-0.139 Sum_probs=50.8
Q ss_pred CCCChHHHHHHHHHcCCCCCc---EEEEcCChHHHHHHHHc-----CCeEEEEeCCCCcccccCcceEeCChhhhHHHHH
Q 018088 256 MESMAHRFLSAAVKLDRKPSK---CVVFEDDPRAITAAHNC-----TMMAVGLIGAHRAYDLVQADLAVANFNELSVINL 327 (361)
Q Consensus 256 ~~~KP~~~~~~~~klgi~p~~---~v~IGDs~~Di~aA~~a-----G~~~v~V~g~~~~~~l~~ad~vi~sl~EL~~~ll 327 (361)
...|...+..+++.+|+...+ .++|||+.+|..|.+.+ |+. |.|. .. .....|.+.+++..|+..++.
T Consensus 299 g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~-I~Vg-n~--~~~t~A~y~L~dp~eV~~~L~ 374 (384)
T PLN02580 299 DWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYG-ILVS-SV--PKESNAFYSLRDPSEVMEFLK 374 (384)
T ss_pred CCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceE-EEEe-cC--CCCccceEEcCCHHHHHHHHH
Confidence 345788999999999998764 38999999999999963 544 3332 21 123468999999999987653
Q ss_pred H
Q 018088 328 R 328 (361)
Q Consensus 328 ~ 328 (361)
.
T Consensus 375 ~ 375 (384)
T PLN02580 375 S 375 (384)
T ss_pred H
Confidence 3
|
|
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=92.25 E-value=1.5 Score=39.98 Aligned_cols=86 Identities=13% Similarity=0.111 Sum_probs=53.5
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCC---HHHHHHHHHh-CCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcE
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLD---RRKMVEALER-MGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKC 277 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~---~~~~~~~L~~-lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~ 277 (361)
..++|++.++|+.++++|+++.++||+. .......|.. +|+.--.+.++++. ......+++.+ ..+.+
T Consensus 13 ~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~~iits~-------~~~~~~l~~~~-~~~~v 84 (236)
T TIGR01460 13 HKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPDQIITSG-------SVTKDLLRQRF-EGEKV 84 (236)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHHHeeeHH-------HHHHHHHHHhC-CCCEE
Confidence 3679999999999999999999999754 4444455555 67765566666652 22222222211 22457
Q ss_pred EEEcCChHHHHHHHHcCCe
Q 018088 278 VVFEDDPRAITAAHNCTMM 296 (361)
Q Consensus 278 v~IGDs~~Di~aA~~aG~~ 296 (361)
+++|.. ...+.++..|+.
T Consensus 85 ~v~G~~-~~~~~l~~~g~~ 102 (236)
T TIGR01460 85 YVIGVG-ELRESLEGLGFR 102 (236)
T ss_pred EEECCH-HHHHHHHHcCCc
Confidence 777753 334555666653
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=91.72 E-value=0.16 Score=46.89 Aligned_cols=41 Identities=5% Similarity=-0.112 Sum_probs=34.8
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEcC----ChHHHHHHHHcCCeEEEEeC
Q 018088 257 ESMAHRFLSAAVKLDRKPSKCVVFED----DPRAITAAHNCTMMAVGLIG 302 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p~~~v~IGD----s~~Di~aA~~aG~~~v~V~g 302 (361)
..|...+..++ ++++|++||| +.||++|.+.-|+.++.|.+
T Consensus 188 vnKg~al~~L~-----~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~ 232 (245)
T PLN02423 188 WDKTYCLQFLE-----DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTS 232 (245)
T ss_pred CCHHHHHHHhc-----CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCC
Confidence 34777777777 8999999999 79999999998988888754
|
|
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.66 E-value=0.58 Score=49.73 Aligned_cols=97 Identities=12% Similarity=0.126 Sum_probs=64.8
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcc----c--------------------ceeEecCCCCCC
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKY----F--------------------QAIVSEEDGMES 258 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~----F--------------------d~iv~~e~~~~~ 258 (361)
+|.+.+.+.+..++.+|+++..||+.....+++..+..|+..- + ..++.+.+...-
T Consensus 590 PPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~~~ 669 (1019)
T KOG0203|consen 590 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELPDM 669 (1019)
T ss_pred CCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEeccccccc
Confidence 5678888999999999999999999887777777777664210 0 123444443322
Q ss_pred ChHHHHHHHHHcC------CCC--------------CcEEEEcCChHHHHHHHHcCCeEEE
Q 018088 259 MAHRFLSAAVKLD------RKP--------------SKCVVFEDDPRAITAAHNCTMMAVG 299 (361)
Q Consensus 259 KP~~~~~~~~klg------i~p--------------~~~v~IGDs~~Di~aA~~aG~~~v~ 299 (361)
.++-+..++.... -+| +=|-+.||+.||-.+.+.|-+++++
T Consensus 670 ~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAM 730 (1019)
T KOG0203|consen 670 SSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAM 730 (1019)
T ss_pred CHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceee
Confidence 3333333333322 122 2255789999999999999998776
|
|
| >KOG3128 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=91.41 E-value=1.9 Score=39.71 Aligned_cols=91 Identities=16% Similarity=0.182 Sum_probs=63.3
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEec----CCCC----CCCh--H-------HHHH
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSE----EDGM----ESMA--H-------RFLS 265 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~----e~~~----~~KP--~-------~~~~ 265 (361)
.+..|+.+++..|+++++++.+.|.+.-..++.++.+......+..+++. ++++ ..+| + .+..
T Consensus 138 ~lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~~~~pn~k~vSN~~~F~edg~l~gF~~~Lihtfnkn~~v~~~ 217 (298)
T KOG3128|consen 138 ALREGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKLVLHPNVKFVSNYMDFDEDGNLCGFSQPLIHTFNKNSSVLQN 217 (298)
T ss_pred HHHHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHHhccCccHHhhhhhhhhcccchhhhhhHHHHHHHccchHHHHh
Confidence 56889999999999999999999999888888888876544433333322 1111 1222 1 3444
Q ss_pred HHHHcCC--CCCcEEEEcCChHHHHHHHHc
Q 018088 266 AAVKLDR--KPSKCVVFEDDPRAITAAHNC 293 (361)
Q Consensus 266 ~~~klgi--~p~~~v~IGDs~~Di~aA~~a 293 (361)
..+.++. ....+++.||+.-|+.||.-+
T Consensus 218 ~s~yf~~~~~~~nVillGdsigdl~ma~gv 247 (298)
T KOG3128|consen 218 ESEYFHQLAGRVNVILLGDSIGDLHMADGV 247 (298)
T ss_pred hhHHHhhccCCceEEEeccccccchhhcCC
Confidence 4555543 346799999999999998765
|
|
| >PLN02499 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=91.28 E-value=2.9 Score=42.39 Aligned_cols=109 Identities=11% Similarity=0.030 Sum_probs=60.0
Q ss_pred cCCChHHHHHHHHHHHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHh-CCCCcccc-------
Q 018088 176 WGKEESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALER-MGLLKYFQ------- 247 (361)
Q Consensus 176 ~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~-lgl~~~Fd------- 247 (361)
.+...++++.....+...+... .+.+. .++..+..| +++|+|..++.+++..++. +|.+...-
T Consensus 74 ~Gl~~~die~vaRavlpkf~~~-----dv~~e---~~~~~~~~g-~~vVVTAsPrvmVEpFake~LG~D~VvGTEL~v~~ 144 (498)
T PLN02499 74 AGVHESEIESVARAVLPKFYMD-----DVDME---AWKVFSSCD-KRVVVTRMPRVMVERFAKEHLRADEVIGSELVVNR 144 (498)
T ss_pred CCCCHHHHHHHHHHHhhHHHHh-----hCCHH---HHHHHHcCC-eEEEEeCCHHHHHHHHHHHhcCCceEEeeeEEEee
Confidence 3455555655554443332222 12333 445566677 9999999999999999998 78743210
Q ss_pred -eeEecCCCCCCChHH-HHHHHHHcCCCCCcEEEEcCChHHHHHHHHcC
Q 018088 248 -AIVSEEDGMESMAHR-FLSAAVKLDRKPSKCVVFEDDPRAITAAHNCT 294 (361)
Q Consensus 248 -~iv~~e~~~~~KP~~-~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG 294 (361)
..+++--.+....+. ...+.+.+| .....+-+||+..|-.-..-+.
T Consensus 145 ~G~~TG~~~G~n~~ek~~~rl~~~~g-~~~~~vg~~~~~~~~~f~~~ck 192 (498)
T PLN02499 145 FGFATGFIRGTDVDQSVANRVANLFV-DERPQLGLGRISASSSFLSLCK 192 (498)
T ss_pred ccEEEEEEecCccHHHHHHHHHHHhC-ccCceecccCCcccchhhhhCc
Confidence 122221111112332 333444455 2345788888876655555544
|
|
| >PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice | Back alignment and domain information |
|---|
Probab=89.06 E-value=0.72 Score=42.46 Aligned_cols=92 Identities=16% Similarity=0.214 Sum_probs=54.9
Q ss_pred CCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEec----CCCC------------CCChH-HH
Q 018088 201 VTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSE----EDGM------------ESMAH-RF 263 (361)
Q Consensus 201 ~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~----e~~~------------~~KP~-~~ 263 (361)
...+.+|+.++++.|.++++|+.|.|.|--..+..+|++.|...---.|++. ++.+ ..|-+ .+
T Consensus 88 ~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn~~~l 167 (246)
T PF05822_consen 88 DIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKNESAL 167 (246)
T ss_dssp ---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HHHHHH
T ss_pred chhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEEeeeEEECCcceEeecCCCceEEeeCCcccc
Confidence 3578999999999999999999999999999999999998653221122222 1110 11211 11
Q ss_pred HH--HHHHcCCCCCcEEEEcCChHHHHHHHHc
Q 018088 264 LS--AAVKLDRKPSKCVVFEDDPRAITAAHNC 293 (361)
Q Consensus 264 ~~--~~~klgi~p~~~v~IGDs~~Di~aA~~a 293 (361)
.. ..+++ -...+++..||+..|+.||.-+
T Consensus 168 ~~~~~~~~~-~~R~NvlLlGDslgD~~Ma~G~ 198 (246)
T PF05822_consen 168 EDSPYFKQL-KKRTNVLLLGDSLGDLHMADGV 198 (246)
T ss_dssp TTHHHHHCT-TT--EEEEEESSSGGGGTTTT-
T ss_pred cCchHHHHh-ccCCcEEEecCccCChHhhcCC
Confidence 10 01111 1346799999999999999877
|
The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A. |
| >KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=88.85 E-value=3.3 Score=39.11 Aligned_cols=93 Identities=16% Similarity=0.127 Sum_probs=57.7
Q ss_pred CCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHH---hCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcE
Q 018088 201 VTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALE---RMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKC 277 (361)
Q Consensus 201 ~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~---~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~ 277 (361)
...+.||+.++++.|+..|-.+.++||++...-+..++ .+|+.. +..++...+- ......+++..-..+.+
T Consensus 36 g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~~-----v~e~~i~ssa-~~~a~ylk~~~~~~k~V 109 (306)
T KOG2882|consen 36 GEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFNS-----VKEENIFSSA-YAIADYLKKRKPFGKKV 109 (306)
T ss_pred cCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCccc-----cCcccccChH-HHHHHHHHHhCcCCCeE
Confidence 44789999999999999999999999987666555554 456643 2222222221 11112222222445778
Q ss_pred EEEcCChHHHHHHHHcCCeEEEE
Q 018088 278 VVFEDDPRAITAAHNCTMMAVGL 300 (361)
Q Consensus 278 v~IGDs~~Di~aA~~aG~~~v~V 300 (361)
.++|-..- -+-++++|+..++.
T Consensus 110 yvig~~gi-~~eL~~aG~~~~g~ 131 (306)
T KOG2882|consen 110 YVIGEEGI-REELDEAGFEYFGG 131 (306)
T ss_pred EEecchhh-hHHHHHcCceeecC
Confidence 88885432 35677788766653
|
|
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=88.35 E-value=0.49 Score=50.17 Aligned_cols=42 Identities=5% Similarity=0.143 Sum_probs=36.2
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCC
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLL 243 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~ 243 (361)
+++.|++++.++.|.+.+++++.+|+.+.-.+..+-+.+|+.
T Consensus 674 CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv 715 (1160)
T KOG0209|consen 674 CPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIV 715 (1160)
T ss_pred CCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeee
Confidence 467999999999999999999999998877777777776653
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=87.48 E-value=1.1 Score=41.78 Aligned_cols=43 Identities=19% Similarity=0.202 Sum_probs=37.9
Q ss_pred CCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCccc
Q 018088 204 PMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYF 246 (361)
Q Consensus 204 ~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~F 246 (361)
..+.+.++|+.|++.|++++++||.+...+...++.+|+..++
T Consensus 22 ~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~ 64 (273)
T PRK00192 22 SYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLEDPF 64 (273)
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCE
Confidence 3466788999999999999999999999999999999987654
|
|
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=85.99 E-value=3.3 Score=39.75 Aligned_cols=87 Identities=14% Similarity=0.192 Sum_probs=58.5
Q ss_pred CCCCccHHHHHHHHhhC----CCcEEEEeCCC---HHHHHH-HHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCC
Q 018088 202 TEPMEGLQEWLDAVSSA----RIPCAVVSGLD---RRKMVE-ALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRK 273 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~----Gi~vaivSn~~---~~~~~~-~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~ 273 (361)
..+.||+.++++.|+.+ |+++.++||+. ...... +.+.+|+.--.+.++++. ......+++++
T Consensus 15 ~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~~~~~i~~s~-------~~~~~ll~~~~-- 85 (321)
T TIGR01456 15 KKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDVSPLQVIQSH-------SPYKSLVNKYE-- 85 (321)
T ss_pred ccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCCCHHHHHhhh-------HHHHHHHHHcC--
Confidence 36799999999999998 99999999975 444344 447888753333444331 12333444442
Q ss_pred CCcEEEEcCChHHHHHHHHcCCeEEE
Q 018088 274 PSKCVVFEDDPRAITAAHNCTMMAVG 299 (361)
Q Consensus 274 p~~~v~IGDs~~Di~aA~~aG~~~v~ 299 (361)
..++++|.+. -...++.+|+..+.
T Consensus 86 -~~v~viG~~~-~~~~l~~~G~~~vv 109 (321)
T TIGR01456 86 -KRILAVGTGS-VRGVAEGYGFQNVV 109 (321)
T ss_pred -CceEEEeChH-HHHHHHHcCCcccc
Confidence 3688999764 46777789987653
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=85.71 E-value=2.3 Score=39.29 Aligned_cols=42 Identities=7% Similarity=0.112 Sum_probs=37.2
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCc
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLK 244 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~ 244 (361)
.+.+...+.|++|+++|++++++|+.+...+...++.+++..
T Consensus 20 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 61 (270)
T PRK10513 20 TISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHMEQ 61 (270)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCCC
Confidence 456678899999999999999999999999999999998864
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=85.29 E-value=1.7 Score=38.97 Aligned_cols=39 Identities=18% Similarity=0.324 Sum_probs=35.5
Q ss_pred CccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCC
Q 018088 205 MEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLL 243 (361)
Q Consensus 205 ~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~ 243 (361)
.+..+++|+.|+++|++++++||.+...+...++.+++.
T Consensus 18 ~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 18 WQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred cHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 444789999999999999999999999999999999986
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=85.20 E-value=1.7 Score=39.38 Aligned_cols=42 Identities=19% Similarity=0.141 Sum_probs=37.5
Q ss_pred CCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcc
Q 018088 204 PMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKY 245 (361)
Q Consensus 204 ~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~ 245 (361)
..+...+.|++|+++|++++++|+.....+...++.+|+..+
T Consensus 16 ~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~~ 57 (225)
T TIGR02461 16 EPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEPP 57 (225)
T ss_pred CchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCc
Confidence 456789999999999999999999999999999999998653
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=83.83 E-value=3.9 Score=33.64 Aligned_cols=83 Identities=13% Similarity=0.035 Sum_probs=58.1
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCC-CHHHHHHHHHhCCCCcccce-----eEecCCC-CCCChHHHHHHHHHcCCCCC
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGL-DRRKMVEALERMGLLKYFQA-----IVSEEDG-MESMAHRFLSAAVKLDRKPS 275 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~-~~~~~~~~L~~lgl~~~Fd~-----iv~~e~~-~~~KP~~~~~~~~klgi~p~ 275 (361)
..+++++..|..|++.|+.++++|++ ....+.+.|+.+.+..-+-. .++...+ ...|-..|...-...|+.-.
T Consensus 44 ~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~fkvk~~Gvlkps~e~ft~~~~g~gsklghfke~~n~s~~~~k 123 (144)
T KOG4549|consen 44 IFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLETFKVKQTGVLKPSLEEFTFEAVGDGSKLGHFKEFTNNSNSIEK 123 (144)
T ss_pred eeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHhccCcccccchhhhcCceeeecCcccchhHHHHhhccCcchh
Confidence 56999999999999999999999986 45677888887755332211 1111122 13465667777777788888
Q ss_pred cEEEEcCChH
Q 018088 276 KCVVFEDDPR 285 (361)
Q Consensus 276 ~~v~IGDs~~ 285 (361)
+..++.|-..
T Consensus 124 ~~~~fdDesr 133 (144)
T KOG4549|consen 124 NKQVFDDESR 133 (144)
T ss_pred ceeeeccccc
Confidence 8888888544
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=82.61 E-value=2.1 Score=38.15 Aligned_cols=42 Identities=17% Similarity=0.048 Sum_probs=36.9
Q ss_pred CCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcc
Q 018088 204 PMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKY 245 (361)
Q Consensus 204 ~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~ 245 (361)
+.|...+.|++|++.|++++++|+.+...+...++.+++..+
T Consensus 19 i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~ 60 (215)
T TIGR01487 19 ISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGP 60 (215)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCc
Confidence 466778899999999999999999999999999999988644
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=82.60 E-value=5.6 Score=35.74 Aligned_cols=41 Identities=22% Similarity=0.389 Sum_probs=33.0
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCC---HHHHHHHHHhCCCC
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLD---RRKMVEALERMGLL 243 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~---~~~~~~~L~~lgl~ 243 (361)
...||+.+.|+.|+..+.++-++||.. +..+...|.++|++
T Consensus 23 ~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~ 66 (262)
T KOG3040|consen 23 AAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFD 66 (262)
T ss_pred ccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCC
Confidence 469999999999999999999999965 44555666667764
|
|
| >KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=81.84 E-value=4.2 Score=39.92 Aligned_cols=95 Identities=8% Similarity=-0.002 Sum_probs=70.1
Q ss_pred HHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhC---CCCcccceeEecCCC---------------CCC--------Ch-
Q 018088 208 LQEWLDAVSSARIPCAVVSGLDRRKMVEALERM---GLLKYFQAIVSEEDG---------------MES--------MA- 260 (361)
Q Consensus 208 v~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~l---gl~~~Fd~iv~~e~~---------------~~~--------KP- 260 (361)
...+|..+++.|-++.++||+...+....+..+ +...+||.++....- ..+ +|
T Consensus 203 ~v~~l~~~r~sGKk~fl~Tns~~~ytd~~mt~~~~~dW~~yfd~v~~~a~Kp~ff~e~~vlreV~t~~g~l~~g~~~~p~ 282 (424)
T KOG2469|consen 203 IVPLLSMLRDSGKKTFLHTNSDWDYTDIFMAFHYGFDWETYFDLVETRAAKPGFFHEGTVLREVEPQEGLLKNGDNTGPL 282 (424)
T ss_pred cccchHHHHhhccceEEeeccccchhhHHHHHHhCCCcceeEEEEEEeccCCccccccceeeeeccccccccccccCCcc
Confidence 444999999999999999999888888887764 567788877765210 011 12
Q ss_pred --------HHHHHHHHHcCCCCCcEEEEcCChH-HH-HHHHHcCCeEEEEeC
Q 018088 261 --------HRFLSAAVKLDRKPSKCVVFEDDPR-AI-TAAHNCTMMAVGLIG 302 (361)
Q Consensus 261 --------~~~~~~~~klgi~p~~~v~IGDs~~-Di-~aA~~aG~~~v~V~g 302 (361)
.....+++.++....+++++||... |+ ..-+.-|..++.|..
T Consensus 283 e~~~~ySggs~~~~~~~l~~~g~diLy~gdHi~~dvl~skk~~~wrt~lv~p 334 (424)
T KOG2469|consen 283 EQGGVYSGGSLKTVETSMKVKGKDILYGGDHIWGDVLVSKKRRGWRTVLVAP 334 (424)
T ss_pred hhcccCCcchHHHHHHHhcccccceeecccceeeeEEecceecceEEEEEeh
Confidence 2567788888888899999999987 64 444566888887643
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=81.80 E-value=2.9 Score=37.48 Aligned_cols=43 Identities=14% Similarity=-0.024 Sum_probs=37.8
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcc
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKY 245 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~ 245 (361)
.+.|...+.|++|+++|++++++|+.+...+...++.+++..+
T Consensus 20 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~ 62 (230)
T PRK01158 20 RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGP 62 (230)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCc
Confidence 3567788999999999999999999999999998999988654
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=80.78 E-value=3.7 Score=37.64 Aligned_cols=42 Identities=17% Similarity=0.220 Sum_probs=37.9
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCc
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLK 244 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~ 244 (361)
.+.+...+.|++|+++|++++++|+.....+...++.+++..
T Consensus 16 ~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~ 57 (256)
T TIGR00099 16 TISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDT 57 (256)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCC
Confidence 467888999999999999999999999999999999998864
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=80.48 E-value=5.1 Score=41.65 Aligned_cols=122 Identities=11% Similarity=0.074 Sum_probs=75.3
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHHHHHHHHHh
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLYYDN 197 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~~ 197 (361)
-+.||-|+| ||..+. +|-.++...|.+++
T Consensus 530 ~kIVISDIDGTITKSD-----vLGh~lp~iGkDWT--------------------------------------------- 559 (738)
T KOG2116|consen 530 DKIVISDIDGTITKSD-----VLGHVLPMIGKDWT--------------------------------------------- 559 (738)
T ss_pred CcEEEecCCCceEhhh-----hhhhhhhhhcCcch---------------------------------------------
Confidence 478999999 998777 77666666664431
Q ss_pred cccCCCCCccHHHHHHHHhhCCCcEEEEeCC---CHHHHHHHHHhCCCC--cccce--eEecC--------CCCCCChHH
Q 018088 198 LLSVTEPMEGLQEWLDAVSSARIPCAVVSGL---DRRKMVEALERMGLL--KYFQA--IVSEE--------DGMESMAHR 262 (361)
Q Consensus 198 l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~---~~~~~~~~L~~lgl~--~~Fd~--iv~~e--------~~~~~KP~~ 262 (361)
.-|+..+..+++++||++..+|.. .....+..|..+.-+ .+-|+ +++.+ ++..+||+-
T Consensus 560 -------h~GVAkLyt~Ik~NGYk~lyLSARaIgQA~~TR~yL~nv~QdG~~LPdGPViLSPd~lf~Al~REVI~RkPe~ 632 (738)
T KOG2116|consen 560 -------HTGVAKLYTKIKENGYKILYLSARAIGQADSTRQYLKNVEQDGKKLPDGPVILSPDSLFAALHREVIERKPEV 632 (738)
T ss_pred -------hhhHHHHHHHHHhCCeeEEEEehhhhhhhHHHHHHHHHHhhcCccCCCCCEEeCCCcchHHHHHHHHHcCchh
Confidence 235667777788999999999873 334444444443211 12232 22222 334568875
Q ss_pred HHHH-----HHHcCCCCCc-EEEEcCChHHHHHHHHcCCeE
Q 018088 263 FLSA-----AVKLDRKPSK-CVVFEDDPRAITAAHNCTMMA 297 (361)
Q Consensus 263 ~~~~-----~~klgi~p~~-~v~IGDs~~Di~aA~~aG~~~ 297 (361)
|.-+ ..-+.-..+- ...||...+|+..=+..|+..
T Consensus 633 FKIAcL~DIk~LF~p~~nPFYAgFGNR~TDviSY~~VgVP~ 673 (738)
T KOG2116|consen 633 FKIACLTDIKNLFPPSGNPFYAGFGNRITDVISYRQVGVPL 673 (738)
T ss_pred hhHHHHHHHHHhcCCCCCceeeecCCCcccceeeeeecCCc
Confidence 5443 3333311222 457899999999999999974
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=80.15 E-value=3.2 Score=39.33 Aligned_cols=42 Identities=19% Similarity=0.201 Sum_probs=37.0
Q ss_pred CccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCccc
Q 018088 205 MEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYF 246 (361)
Q Consensus 205 ~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~F 246 (361)
.+-+.+.|++|+++|++++++|+.....+..+++.+++..+|
T Consensus 20 ~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~p~ 61 (302)
T PRK12702 20 YGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEHPF 61 (302)
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCeE
Confidence 455778899999999999999999999999999999987654
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 361 | ||||
| 4g9b_A | 243 | Crystal Structure Of Beta-Phosphoglucomutase Homolo | 9e-07 | ||
| 3nas_A | 233 | The Crystal Structure Of Beta-Phosphoglucomutase Fr | 2e-06 | ||
| 3kbb_A | 216 | Crystal Structure Of Putative Beta-Phosphoglucomuta | 5e-06 | ||
| 4gib_A | 250 | 2.27 Angstrom Crystal Structure Of Beta-Phosphogluc | 3e-05 |
| >pdb|4G9B|A Chain A, Crystal Structure Of Beta-Phosphoglucomutase Homolog From Escherichia Coli, Target Efi-501172, With Bound Mg, Open Lid Length = 243 | Back alignment and structure |
|
| >pdb|3NAS|A Chain A, The Crystal Structure Of Beta-Phosphoglucomutase From Bacillus Subtilis Length = 233 | Back alignment and structure |
|
| >pdb|3KBB|A Chain A, Crystal Structure Of Putative Beta-Phosphoglucomutase From Thermotoga Maritima Length = 216 | Back alignment and structure |
|
| >pdb|4GIB|A Chain A, 2.27 Angstrom Crystal Structure Of Beta-Phosphoglucomutase (Pgmb) From Clostridium Difficile Length = 250 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 361 | |||
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 2e-30 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 1e-29 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 2e-28 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 5e-28 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 7e-28 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 2e-27 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 7e-27 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 2e-24 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 4e-24 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 4e-24 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 1e-23 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 2e-22 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 2e-21 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 4e-20 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 4e-16 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 3e-13 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 3e-12 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 5e-12 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 3e-11 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 5e-11 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 9e-11 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 1e-10 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 1e-10 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 2e-10 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 3e-10 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 2e-09 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 2e-09 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 3e-08 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 3e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 7e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-06 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 2e-07 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 3e-07 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 5e-07 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 7e-07 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 7e-07 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 9e-07 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 1e-06 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 2e-06 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 2e-06 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 3e-06 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 6e-06 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 6e-06 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 1e-05 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 2e-05 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 6e-05 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 9e-05 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 3e-04 |
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} Length = 233 | Back alignment and structure |
|---|
Score = 115 bits (289), Expect = 2e-30
Identities = 44/221 (19%), Positives = 86/221 (38%), Gaps = 20/221 (9%)
Query: 114 MKPDEAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHK 172
++P + IF D + D+ + AWK+ E + + R+I +G +
Sbjct: 3 LRPQTS--FIFDLDGTLTDSVYQNVAAWKEALDAENIPLAMW-RIHRKIGMSGGLMLKSL 59
Query: 173 VLLWGKE--ESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDR 230
G + + +RL+ + Q Y+ L + G E L+ + + + +
Sbjct: 60 SRETGMSITDEQAERLSEKHAQ-AYERLQHQIIALPGAVELLETLDKENLKWCIATSGGI 118
Query: 231 RKMVEALERMGLLKYFQAIVSEEDGMESMAHR------FLSAAVKLDRKPSKCVVFEDDP 284
L+ + L IV+ +D +++ FL+AA K+ +C+V D
Sbjct: 119 DTATINLKALKLDINKINIVTRDD----VSYGKPDPDLFLAAAKKIGAPIDECLVIGDAI 174
Query: 285 RAITAAHNCTMMAVGLI-GAHRAYDLVQ--ADLAVANFNEL 322
+ AA C VGL+ G + +L + A + +L
Sbjct: 175 WDMLAARRCKATGVGLLSGGYDIGELERAGALRVYEDPLDL 215
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A Length = 221 | Back alignment and structure |
|---|
Score = 112 bits (283), Expect = 1e-29
Identities = 52/227 (22%), Positives = 86/227 (37%), Gaps = 24/227 (10%)
Query: 121 GLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKE 179
++F D V+ DT AWK LA E G Q+ + L K+L +
Sbjct: 4 AVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDR-QFNEQLKGVSREDSLQKILDLADK 62
Query: 180 ---ESELDRLNSRLTQLYYDNLLSVT--EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMV 234
E L R Y + V+ + G+ + L + S +I A+ S +
Sbjct: 63 KVSAEEFKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASKNGPFL 122
Query: 235 EALERMGLLKYFQAIVSEEDGMESMAHR-------FLSAAVKLDRKPSKCVVFEDDPRAI 287
LERM L YF AI + F++AA + PS+ + ED I
Sbjct: 123 --LERMNLTGYFDAIADPAE-----VAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGI 175
Query: 288 TAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNELSVINLRRLFANK 334
A + + +G+ R DL + V + + ++ L+ ++ K
Sbjct: 176 QAIKDSGALPIGV---GRPEDLGDDIVIVPDTSHYTLEFLKEVWLQK 219
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 Length = 226 | Back alignment and structure |
|---|
Score = 109 bits (275), Expect = 2e-28
Identities = 39/218 (17%), Positives = 74/218 (33%), Gaps = 15/218 (6%)
Query: 121 GLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVL-LWGK 178
IF D ++ D+ L A + G +I + + L L D V+
Sbjct: 11 AAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRR-NELPDTLGLRIDMVVDLWYARQPW 69
Query: 179 EESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALE 238
+ R+ + + G++E + + + S + + L
Sbjct: 70 NGPSRQEVVERVIARAISLVEETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLT 129
Query: 239 RMGLLKYFQAIVSEEDGMESMAHR------FLSAAVKLDRKPSKCVVFEDDPRAITAAHN 292
L F A+ S E + + +L A KL P CV ED + A+
Sbjct: 130 MFDLRDSFDALASAEK----LPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKA 185
Query: 293 CTMMAVGLIGAHRAYD--LVQADLAVANFNELSVINLR 328
M ++ + D V A++ +++ EL+ +L
Sbjct: 186 ARMRSIVVPAPEAQNDPRFVLANVKLSSLTELTAKDLL 223
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} Length = 233 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 5e-28
Identities = 52/227 (22%), Positives = 93/227 (40%), Gaps = 29/227 (12%)
Query: 121 GLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKE 179
+IF D V+ DT AWK +A + ++ + ++ + L +L++G
Sbjct: 4 AVIFDLDGVITDTAEYHFLAWKHIAEQIDIPFDRD--MNERLKGISREESLESILIFGGA 61
Query: 180 E-----SELDRLNSRLTQLYYDNLLSVT--EPMEGLQEWLDAVSSARIPCAVVSGLDRRK 232
E +E L R + Y + +T + + G+ L + + I + S +
Sbjct: 62 ETKYTNAEKQELMHRKNRDYQMLISKLTPEDLLPGIGRLLCQLKNENIKIGLASS---SR 118
Query: 233 MVEA-LERMGLLKYFQAIVSEEDGMESMAHR-------FLSAAVKLDRKPSKCVVFEDDP 284
L R+ ++ F AIV + FL+AA LD P+ C ED
Sbjct: 119 NAPKILRRLAIIDDFHAIVDPTT-----LAKGKPDPDIFLTAAAMLDVSPADCAAIEDAE 173
Query: 285 RAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNELSVINLRRLF 331
I+A + M AVG +G + ++ ADL V ++L++ L +
Sbjct: 174 AGISAIKSAGMFAVG-VG--QGQPMLGADLVVRQTSDLTLELLHEEW 217
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} Length = 214 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 2e-27
Identities = 35/210 (16%), Positives = 73/210 (34%), Gaps = 14/210 (6%)
Query: 121 GLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKE 179
+IF D V+ DT + ++G I + V +L +
Sbjct: 7 AIIFDMDGVLFDTEKYYYDRRASFLGQKGISIDHL--PPSFFIGGNTKQVWENILRDEYD 64
Query: 180 ESELDRLNSRLTQLYYDNLLSVTEP-MEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALE 238
+ ++ L +N L E + + L+ V S + + S + + ALE
Sbjct: 65 KWDVSTLQEEYNTYKQNNPLPYKELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALE 124
Query: 239 RMGLLKYFQAIVSEEDGMESMAHR------FLSAAVKLDRKPSKCVVFEDDPRAITAAHN 292
L +F ++S E+ +L+A +L+ + S+ ++ ED + I A
Sbjct: 125 ENRLQGFFDIVLSGEE----FKESKPNPEIYLTALKQLNVQASRALIIEDSEKGIAAGVA 180
Query: 293 CTMMAVGLIGAHRAYDLVQADLAVANFNEL 322
+ + D A + + ++
Sbjct: 181 ADVEVWAIRDNEFGMDQSAAKGLLDSLTDV 210
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} Length = 243 | Back alignment and structure |
|---|
Score = 105 bits (265), Expect = 7e-27
Identities = 52/228 (22%), Positives = 84/228 (36%), Gaps = 29/228 (12%)
Query: 121 GLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGK- 178
G+IF D V+ DT L AW+Q+A E G I + + D L ++L G
Sbjct: 7 GVIFDLDGVITDTAHLHFQAWQQIAAEIGISIDAQ--FNESLKGISRDESLRRILQHGGK 64
Query: 179 ----EESELDRLNSRLTQLYYDNL--LSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRK 232
E +L R LY +L L+V + G++ L + + +I + S
Sbjct: 65 EGDFNSQERAQLAYRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASV---SL 121
Query: 233 MVEA-LERMGLLKYFQAIVSEEDGMESMAHR------FLSAAVKLDRKPSKCVVFEDDPR 285
L + L ++F + + FL+A L P C+ ED
Sbjct: 122 NAPTILAALELREFFTFCADASQ----LKNSKPDPEIFLAACAGLGVPPQACIGIEDAQA 177
Query: 286 AITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNELSVINLRRLFAN 333
I A + M +VG+ A L + + L+ L + N
Sbjct: 178 GIDAINASGMRSVGIGAGLTG-----AQLLLPSTESLTWPRLSAFWQN 220
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A Length = 243 | Back alignment and structure |
|---|
Score = 99.3 bits (248), Expect = 2e-24
Identities = 38/223 (17%), Positives = 77/223 (34%), Gaps = 35/223 (15%)
Query: 121 GLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQE----------GDVLRQILNAGADHV 169
++F D V+ ++ AW Q+ G ++ +E + +
Sbjct: 26 AVLFDMDGVLFNSMPYHSEAWHQVMKTHGLDLSREEAYMHEGRTGASTINIVFQRELGKE 85
Query: 170 LHKVLLWGKEESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLD 229
+ E++ + + L+ E M G E L V S + VV+G
Sbjct: 86 A--------TQEEIESIYHEKSILFNS--YPEAERMPGAWELLQKVKSEGLTPMVVTGSG 135
Query: 230 RRKMVEAL-ERMGLLKYFQAIVSEEDGMESMAHR------FLSAAVKLDRKPSKCVVFED 282
+ ++E L + + + +V+ D + + +L A K K + VV E+
Sbjct: 136 QLSLLERLEHNFPGMFHKELMVTAFD----VKYGKPNPEPYLMALKKGGLKADEAVVIEN 191
Query: 283 DPRAITAAHNCTMMAVGLIGAHRAYDLVQ---ADLAVANFNEL 322
P + A H + + + ++ ADL + L
Sbjct: 192 APLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFPSMQTL 234
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} Length = 247 | Back alignment and structure |
|---|
Score = 98.5 bits (246), Expect = 4e-24
Identities = 34/218 (15%), Positives = 78/218 (35%), Gaps = 23/218 (10%)
Query: 121 GLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKE 179
++F D V+ D+ +W ++ G + +E ++ V +
Sbjct: 25 AVLFDMDGVLFDSMPNHAESWHKIMKRFGFGLSRE--EAYMHEGRTGASTINIVSRRERG 82
Query: 180 ----ESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVE 235
E E+ + T+ + E M G E L + S + VV+G + +++
Sbjct: 83 HDATEEEIKAIYQAKTEEFNK--CPKAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLD 140
Query: 236 AL-ERMGLLKYFQAIVSEEDGMESMAHR------FLSAAVKLDRKPSKCVVFEDDPRAIT 288
L + +V+ D + + +L A K KP++ +V E+ P +
Sbjct: 141 RLNHNFPGIFQANLMVTAFD----VKYGKPNPEPYLMALKKGGFKPNEALVIENAPLGVQ 196
Query: 289 AAHNCTMMAVGLIGAHRAYDLV---QADLAVANFNELS 323
A + + + +++ A+L + + +
Sbjct: 197 AGVAAGIFTIAVNTGPLHDNVLLNEGANLLFHSMPDFN 234
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 Length = 229 | Back alignment and structure |
|---|
Score = 98.1 bits (245), Expect = 4e-24
Identities = 43/225 (19%), Positives = 80/225 (35%), Gaps = 26/225 (11%)
Query: 114 MKPDEAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHK 172
M + +IF D V+ D+ + +L E G I E ++ + ++L +
Sbjct: 1 MSGFDL--IIFDCDGVLVDSEIIAAQVESRLLTEAGYPISVE-EMGERFAGMTWKNILLQ 57
Query: 173 VL-LWGKEESE--LDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLD 229
V S LD+ L ++ + ++G++ L + P + S
Sbjct: 58 VESEASIPLSASLLDKSEKLLDMRLERDV----KIIDGVKFALSRL---TTPRCICSNSS 110
Query: 230 RRKMVEALERMGLLKYFQAIVSEEDGMESMAHR-----FLSAAVKLDRKPSKCVVFEDDP 284
++ L ++GL YF + + + + FL A + P + VV ED
Sbjct: 111 SHRLDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRVVVVEDSV 170
Query: 285 RAITAAHNCTMMAVGLIGAHRAYD-------LVQADLAVANFNEL 322
I A M +G GA Y A+ ++ +L
Sbjct: 171 HGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDL 215
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A Length = 259 | Back alignment and structure |
|---|
Score = 97.1 bits (242), Expect = 1e-23
Identities = 43/225 (19%), Positives = 78/225 (34%), Gaps = 21/225 (9%)
Query: 113 AMKPDEAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLH 171
+M ++F D V+ ++ + W+ + E G + ++ D VL
Sbjct: 22 SMPDAPFDAVLFDLDGVLVESEGIIAQVWQSVLAERGLHLDLT-EIAMYFTGQRFDGVLA 80
Query: 172 KVLLWGKEESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRR 231
+ D L+ L + + V +EG E L A+ +A +P A+ S +R
Sbjct: 81 YLAQQHDFVPPPDFLD-VLETRFNAAMTGV-TAIEGAAETLRALRAAGVPFAIGSNSERG 138
Query: 232 KMVEALERMGLLKYFQAIVSEEDGMESMAHR-------FLSAAVKLDRKPSKCVVFEDDP 284
++ L GL + + + R + AA +L P +CVV ED
Sbjct: 139 RLHLKLRVAGLTELAGEHI---YDPSWVGGRGKPHPDLYTFAAQQLGILPERCVVIEDSV 195
Query: 285 RAITAAHNCTMMAVGLIGAHRAYDL-------VQADLAVANFNEL 322
A GL+ + + A + + EL
Sbjct: 196 TGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVLTSHAEL 240
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} Length = 277 | Back alignment and structure |
|---|
Score = 94.6 bits (235), Expect = 2e-22
Identities = 44/234 (18%), Positives = 81/234 (34%), Gaps = 19/234 (8%)
Query: 107 LKRIRYAMKPDEAYGLIFSWD-VVADTRAL-KLNAWKQLAFEEGKEIPQE---------- 154
LK + P EA LI W D +L + A+ +L +EG E+ Q
Sbjct: 4 LKANVFCAGPVEA--LILDWAGTTIDFGSLAPVYAFMELFKQEGIEVTQAEAREPMGTEK 61
Query: 155 GDVLRQILNAGA-DHVLHKVLLWGKEESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLD 213
+ +R++L + + E ++ RL + + ++ + G +E D
Sbjct: 62 SEHIRRMLGNSRIANAWLSIKGQASNEEDIKRLYDLFAPIQTRIVAQRSQLIPGWKEVFD 121
Query: 214 AVSSARIPCAVVSGLDRRKMVEALERMGLLKY-FQAIVSEEDGMES--MAHRFLSAAVKL 270
+ + I +G M AL Y + V D + L A++L
Sbjct: 122 KLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPASTVFATDVVRGRPFPDMALKVALEL 181
Query: 271 DRKP-SKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNELS 323
+ + C+ +D I M VG+ + L + D + +E
Sbjct: 182 EVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQ 235
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} Length = 275 | Back alignment and structure |
|---|
Score = 91.3 bits (227), Expect = 2e-21
Identities = 35/221 (15%), Positives = 74/221 (33%), Gaps = 28/221 (12%)
Query: 121 GLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKE 179
+F D + ++ W+ ++ + V+ + K +
Sbjct: 37 AALFDVDGTIIISQPAIAAFWRDFGKDKPYFDAEH--VIHISHGWRTYDAIAKFAPDFAD 94
Query: 180 ESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSA-RIPCAVVSGLDRRKMVEALE 238
E +++L + + Y ++ + G + +A+++ + AV + R + +
Sbjct: 95 EEYVNKLEGEIPEKYGEHS----IEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFD 150
Query: 239 RMGLLKYFQAIVSEEDGMESMAHR------FLSAAVKL-------DRKPSKCVVFEDDPR 285
+ + K + ++ D + +L L D SK VVFED P
Sbjct: 151 ILKI-KRPEYFITAND----VKQGKPHPEPYLKGRNGLGFPINEQDPSKSKVVVFEDAPA 205
Query: 286 AITAAHNCTMMAVGLIGAHRAYDLVQ--ADLAVANFNELSV 324
I A VG+ L + D+ V N + V
Sbjct: 206 GIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKNHESIRV 246
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} Length = 250 | Back alignment and structure |
|---|
Score = 87.4 bits (217), Expect = 4e-20
Identities = 41/213 (19%), Positives = 77/213 (36%), Gaps = 16/213 (7%)
Query: 121 GLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKE 179
LIF D ++ DT L ++++ K+ + V ++ A ++ +
Sbjct: 32 HLIFDMDGLLLDTERLYSVVFQEICNRYDKKYSWD--VKSLVMGKKALEAAQIIIDVLQL 89
Query: 180 ESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALER 239
+ L + + M G ++ + + IP A+ + R
Sbjct: 90 PMSKEELVEESQTKLKE-VFPTAALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSR 148
Query: 240 -MGLLKYFQAIVSEEDGMESMAHR------FLSAAVKLDRKPS--KCVVFEDDPRAITAA 290
F IV +D + H FL+ A + P+ KC+VFED P + AA
Sbjct: 149 HKEFFSLFSHIVLGDDPE--VQHGKPDPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAA 206
Query: 291 HNCTMMAVGLIGAHRAYDLV-QADLAVANFNEL 322
M V + + + DL +A L + + +
Sbjct: 207 LAAGMQVVMVPDGNLSRDLTTKATLVLNSLQDF 239
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A Length = 267 | Back alignment and structure |
|---|
Score = 76.5 bits (188), Expect = 4e-16
Identities = 37/222 (16%), Positives = 77/222 (34%), Gaps = 25/222 (11%)
Query: 123 IFSWD-VVADTRALKL-NAWKQLAFEEGKEIPQEGDVLRQILNAGADHV----------- 169
IF+W D + ++ + G I E + + + DHV
Sbjct: 10 IFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITAE-EARKPMGLLKIDHVRALTEMPRIAS 68
Query: 170 -LHKVLLWGKEESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGL 228
++V E+++ + ++ + L P+ G++E + ++ I +G
Sbjct: 69 EWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGSTTGY 128
Query: 229 DRRKMVEALERMGLLKYFQ-AIVSEEDGMES-----MAHRFLSAAVKLDRKP-SKCVVFE 281
R M + L Y +V+ +D M ++ A++L P + +
Sbjct: 129 TREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYK---NAMELGVYPMNHMIKVG 185
Query: 282 DDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNELS 323
D + N M VG+I L + ++ + EL
Sbjct: 186 DTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELR 227
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 Length = 209 | Back alignment and structure |
|---|
Score = 66.8 bits (164), Expect = 3e-13
Identities = 19/174 (10%), Positives = 47/174 (27%), Gaps = 17/174 (9%)
Query: 156 DVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAV 215
+ A + + SE D ++ + E G+ + +
Sbjct: 41 QAQKTFPMAAEQAMTELGI----AASEFDHFQAQYED-VMASHYDQIELYPGITSLFEQL 95
Query: 216 SSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHR------FLSAAVK 269
+ + +V+ R ++ + + +S +D R L+A K
Sbjct: 96 P-SELRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDT----PKRKPDPLPLLTALEK 150
Query: 270 LDRKPSKCVVFEDDPRAITAAHNCTMMAVGLI-GAHRAYDLVQADLAVANFNEL 322
++ P + D A + + G D + ++
Sbjct: 151 VNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQKPLDI 204
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} Length = 225 | Back alignment and structure |
|---|
Score = 64.5 bits (158), Expect = 3e-12
Identities = 24/175 (13%), Positives = 54/175 (30%), Gaps = 12/175 (6%)
Query: 156 DVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAV 215
D++++ + + L + +L+ ++ + + T L +
Sbjct: 43 DMIKRTIGKTLEESFSI-LTGITDADQLESFRQEYSKEADIYMNANTILFPDTLPTLTHL 101
Query: 216 SSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMES-----MAHRFLSAAVKL 270
I ++S R +++ L +F I+ ED L A +L
Sbjct: 102 KKQGIRIGIISTKYRFRILSFLRNHMPDDWFDIIIGGEDVTHHKPDPEGL---LLAIDRL 158
Query: 271 DRKPSKCVVFEDDPRAITAAHNCTMMAVGLI-GAHRAYDLVQ--ADLAVANFNEL 322
P + + D A + G+ G A + D ++ +L
Sbjct: 159 KACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRIISTLGQL 213
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 Length = 234 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 5e-12
Identities = 36/217 (16%), Positives = 71/217 (32%), Gaps = 18/217 (8%)
Query: 122 LIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLW-GKE 179
++F D + ++ A E ++++VL G E
Sbjct: 7 VLFDIDGTLLKVESMNRRVL-ADALIEVYGTEGSTGSHDFSGK-MDGAIIYEVLSNVGLE 64
Query: 180 ESELDRLNSRLTQLYYDNLLSV-----TEPMEGLQEWLDAVSSA-RIPCAVVSGLDRRKM 233
+E+ + + Y +EG++E LDA+SS + +++G
Sbjct: 65 RAEIADKFDKAKETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASG 124
Query: 234 VEALERMGLLKYFQAIVSEEDGME-----SMAHRFLSAAVKLDRKPSKCVVFEDDPRAIT 288
L+ G+ YF +D ++ +A + PS+ V+ D I
Sbjct: 125 RHKLKLPGIDHYFPFGAFADDALDRNELPHIALERARRMTGANYSPSQIVIIGDTEHDIR 184
Query: 289 AAHNCTMMAVGLI-GAHRAYDLVQ--ADLAVANFNEL 322
A ++ + G +L + NF E
Sbjct: 185 CARELDARSIAVATGNFTMEELARHKPGTLFKNFAET 221
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} Length = 231 | Back alignment and structure |
|---|
Score = 61.5 bits (150), Expect = 3e-11
Identities = 39/198 (19%), Positives = 66/198 (33%), Gaps = 23/198 (11%)
Query: 111 RYAMKPDEAYGLIFSWD-VVADT-RALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADH 168
+MK A +IF W + DT + + Q+ + G + + +
Sbjct: 19 PGSMKQPTA--VIFDWYNTLIDTSINIDRTTFYQVLDQMGYKNIDLDSIPNSTIPKYLIT 76
Query: 169 VLHKVLLWGKEESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGL 228
+L GK E L L +G E LD + I A+VS
Sbjct: 77 LL------GKRWKEATILYEN--SLEKSQKSDNFMLNDGAIELLDTLKENNITMAIVSNK 128
Query: 229 DRRKMVEALERMGLLKYFQAIVSEEDGMESMAHR------FLSAAVKLDRKPSKCVVF-E 281
+ ++ + L YF +I+ D L+A ++ +PSK V F
Sbjct: 129 NGERLRSEIHHKNLTHYFDSIIGSGDT----GTIKPSPEPVLAALTNINIEPSKEVFFIG 184
Query: 282 DDPRAITAAHNCTMMAVG 299
D I +A + +
Sbjct: 185 DSISDIQSAIEAGCLPIK 202
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} Length = 196 | Back alignment and structure |
|---|
Score = 60.3 bits (146), Expect = 5e-11
Identities = 21/127 (16%), Positives = 36/127 (28%), Gaps = 14/127 (11%)
Query: 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMES--- 258
+ G Q L A+ +PCA + L +++
Sbjct: 35 AQLTPGAQNALKALRDQGMPCAWIDELPEALS-----TPLAAPVNDWMIAAPRPTAGWPQ 89
Query: 259 --MAHRFLSAAVKLDRKP-SKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLA 315
A + L+ CV+ DPR + + N + +GL L +
Sbjct: 90 PDA---CWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLASCGPLCGLSPSQWQ 146
Query: 316 VANFNEL 322
N E
Sbjct: 147 ALNNAER 153
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* Length = 205 | Back alignment and structure |
|---|
Score = 59.5 bits (145), Expect = 9e-11
Identities = 27/173 (15%), Positives = 52/173 (30%), Gaps = 15/173 (8%)
Query: 157 VLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVS 216
+ + D +L + +ES + +L + P G E + ++
Sbjct: 27 IREALSIPAEDDILTHLAALPADESAAKH---AWLLEHERDLAQGSRPAPGAVELVRELA 83
Query: 217 SARIPCAVVSGLDRRKMVEALERMGLLKYF-QAIVSEEDGMES-----MAHRFLSAAVKL 270
+++ R LE +GL F +A V D + A
Sbjct: 84 GRGYRLGILTRNARELAHVTLEAIGLADCFAEADVLGRDEAPPKPHPGGLLK---LAEAW 140
Query: 271 DRKPSKCVVFEDDPRAITAAHNCTMMAVGLI-GAHRAYDLVQADLAVANFNEL 322
D PS+ V+ D + V + + +L D + +L
Sbjct: 141 DVSPSRMVMVGDYRFDLDCGRAAGTRTVLVNLPDNPWPEL--TDWHARDCAQL 191
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} Length = 137 | Back alignment and structure |
|---|
Score = 58.2 bits (141), Expect = 1e-10
Identities = 21/125 (16%), Positives = 39/125 (31%), Gaps = 2/125 (1%)
Query: 194 YYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIV-SE 252
Y L E + L A + ++S + + ++ S
Sbjct: 9 YAGVLDGTDEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVVDKVLLSG 68
Query: 253 EDGMESMAHR-FLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQ 311
E G+E F +AA +D CV+ +D + A ++ V RA +
Sbjct: 69 ELGVEKPEEAAFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVGVYYQQFDRAVVEIV 128
Query: 312 ADLAV 316
+
Sbjct: 129 GLFGL 133
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A Length = 222 | Back alignment and structure |
|---|
Score = 59.5 bits (145), Expect = 1e-10
Identities = 32/173 (18%), Positives = 61/173 (35%), Gaps = 14/173 (8%)
Query: 156 DVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAV 215
D + + + G +L KVL ++ + + Y +N + T+P + L+A+
Sbjct: 40 DNVTKYIGGGVRALLEKVL----KDKFREEYVEVFRKHYLENPVVYTKPYPEIPYTLEAL 95
Query: 216 SSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHR------FLSAAVK 269
S AVVS + L+ + L YF IV + + L
Sbjct: 96 KSKGFKLAVVSNKLEELSKKILDILNLSGYFDLIVGGDTF----GEKKPSPTPVLKTLEI 151
Query: 270 LDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNEL 322
L +P K ++ D I A + + + D ++ ++L
Sbjct: 152 LGEEPEKALIVGDTDADIEAGKRAGTKTALALWGYVKLNSQIPDFTLSRPSDL 204
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 Length = 207 | Back alignment and structure |
|---|
Score = 58.7 bits (143), Expect = 2e-10
Identities = 27/207 (13%), Positives = 63/207 (30%), Gaps = 15/207 (7%)
Query: 114 MKPDEAYGLIFSWD---VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVL 170
M+ I+ D + D+ L+ ++ + +E V I +L
Sbjct: 2 MQKT---AFIWDLDGTLL--DSYEAILSGIEETFAQFSIPYDKE-KVREFIFKYSVQDLL 55
Query: 171 HKVLLWGKEESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDR 230
+V ++ + + +++ + M G +E L + I + +
Sbjct: 56 VRVA---EDRNLDVEVLNQVRAQSLAEKNAQVVLMPGAREVLAWADESGIQQFIYTHKGN 112
Query: 231 RKMVEALERMGLLKYFQAIVSEEDGMESMAHR--FLSAAVKLDRKPSKCVVFEDDPRAIT 288
L+ +G+ YF I++ + G K D +
Sbjct: 113 N-AFTILKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVE 171
Query: 289 AAHNCTMMAVGLIGAHRAYDLVQADLA 315
A N + ++ + + + LA
Sbjct: 172 FAQNSGIQSINFLESTYEGNHRIQALA 198
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 Length = 190 | Back alignment and structure |
|---|
Score = 57.9 bits (141), Expect = 3e-10
Identities = 33/186 (17%), Positives = 59/186 (31%), Gaps = 23/186 (12%)
Query: 122 LIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEE 180
I+ + D A+ + G I Q+ D + Q L +
Sbjct: 9 YIWDLGGTLLDNYETSTAAFVETLALYG--ITQDHDSVYQALKVSTPFAIETFA------ 60
Query: 181 SELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERM 240
L+ + + L EG+ + L+ +S+ +VS + + ++E LE+
Sbjct: 61 PNLENFLEKYKE-NEARELEHPILFEGVSDLLEDISNQGGRHFLVSHRNDQ-VLEILEKT 118
Query: 241 GLLKYFQAIVSEEDGMESMAHR------FLSAAVKLDRKPSKCVVFEDDPRAITAAHNCT 294
+ YF +V+ G R L K S +V D P I A
Sbjct: 119 SIAAYFTEVVTSSSG----FKRKPNPESMLYLREKYQ--ISSGLVIGDRPIDIEAGQAAG 172
Query: 295 MMAVGL 300
+
Sbjct: 173 LDTHLF 178
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} Length = 235 | Back alignment and structure |
|---|
Score = 56.0 bits (135), Expect = 2e-09
Identities = 33/209 (15%), Positives = 61/209 (29%), Gaps = 17/209 (8%)
Query: 131 DTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAG----------ADHVLHKVLLWGKEE 180
D + QLA G I + + ++ N VL +
Sbjct: 17 DLNIMLDEFSHQLAKISGLHIKDVANAVIEVRNEIKKMRAQASEDPRKVLTGSQEALAGK 76
Query: 181 SELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVS---GLDRRKMVEAL 237
++D + + + +EG +E L V + AV+ L
Sbjct: 77 LKVDVELVKRATARAILNVDESLVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLL 136
Query: 238 ERMGLLKYFQAIV-SEEDGMES-MAHRFLSAAVKLDRKPSKCVVFEDDPRA-ITAAHNCT 294
ER GL+++ ++E F + KP + + D A
Sbjct: 137 ERFGLMEFIDKTFFADEVLSYKPRKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVG 196
Query: 295 MMAVGL-IGAHRAYDLVQADLAVANFNEL 322
M AV + + L + + + L
Sbjct: 197 MWAVWINQEGDKVRKLEERGFEIPSIANL 225
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 Length = 243 | Back alignment and structure |
|---|
Score = 56.1 bits (136), Expect = 2e-09
Identities = 31/183 (16%), Positives = 64/183 (34%), Gaps = 20/183 (10%)
Query: 156 DVLRQILNAGADHVLHKVLLWGKE-------ESELDRLNSRLTQLYYDNLLSVTEPMEGL 208
+++ + GAD + + + W + E E + Y +NL +++ +
Sbjct: 60 NLVMTWIGNGADVLSQRAVDWACKQAEKELTEDEFKYFKRQFGFYYGENLCNISRLYPNV 119
Query: 209 QEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHR------ 262
+E L+A+ + AVV+ + + L G+ F ++ +
Sbjct: 120 KETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSL----PEIKPHPAP 175
Query: 263 FLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLI---GAHRAYDLVQADLAVANF 319
F K P + + D I AAH+ VGL + + D +F
Sbjct: 176 FYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDF 235
Query: 320 NEL 322
++
Sbjct: 236 ADI 238
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} Length = 241 | Back alignment and structure |
|---|
Score = 52.8 bits (127), Expect = 3e-08
Identities = 29/163 (17%), Positives = 60/163 (36%), Gaps = 8/163 (4%)
Query: 188 SRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQ 247
S Y++ + + G ++ L + +++ + K E + R+ L +F+
Sbjct: 79 SAGVIAYHNTKFAYLREVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFFE 138
Query: 248 AIV-SEEDGME-SMAHRFLSAAVKLDRKPSKCVVFEDDPRA-ITAAHNCTMMAV----GL 300
++ S+ +G++ F A + KP + ++ D + I A M V G
Sbjct: 139 HVIISDFEGVKKPHPKIFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYGK 198
Query: 301 IGAHRAYDLVQADLAVANFNELSVINLRRLFANKGSTFMERQK 343
AD + N L + L R ++ RQ+
Sbjct: 199 HSERELEYRKYADYEIDNLESLLEV-LARESSSNKKVHPPRQQ 240
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 Length = 384 | Back alignment and structure |
|---|
Score = 53.6 bits (128), Expect = 3e-08
Identities = 42/265 (15%), Positives = 79/265 (29%), Gaps = 37/265 (13%)
Query: 94 DVDFLNDRLQEGFLKRIRYAMKPDEAYGLIFSWDVVADTRALKLNAWKQLAFEEGKEIPQ 153
D + + + +E + D V + A ++ A E
Sbjct: 106 YQDEPVELKLQNISTNLADCFNLNEQL-PLQFLDNVKVGKNNIYAALEEFATTELHVSDA 164
Query: 154 EGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLT-QLYYDNLLSVTEPMEGLQEWL 212
L+ L A V + L K ++++ +R T + Y + P++ ++ L
Sbjct: 165 TLFSLKGALWTLAQEVYQEWYLGSKLYEDVEKKIARTTFKTGYIYQEIILRPVDEVKVLL 224
Query: 213 DAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQA--IVSEED---------------- 254
+ + A + +G + V E +GLL YF+A I + D
Sbjct: 225 NDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGK 284
Query: 255 -----------GMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAV----G 299
G + + D + +A + G
Sbjct: 285 PNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTG 344
Query: 300 LIGAHRAYDLVQ--ADLAVANFNEL 322
L G A +L AD + + EL
Sbjct: 345 LKGKDAAGELEAHHADYVINHLGEL 369
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 53.3 bits (127), Expect = 7e-08
Identities = 57/421 (13%), Positives = 117/421 (27%), Gaps = 122/421 (28%)
Query: 28 HHLFFPSTLKLSKFKRLVIRNACGFDENGSFNGFPITPNKLFMQEAIGAEYGEG------ 81
HH+ F + ++K ++ F +N P + +E I
Sbjct: 5 HHMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGT 64
Query: 82 ---FETFRQ----------DGPLKVDVDFLNDRLQEGF----LKRIRYAMKPDEAY--GL 122
F T + L+++ FL ++ + Y + D Y
Sbjct: 65 LRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQ 124
Query: 123 IFSWDVVADTRALKLNAWKQLAFE--EGKEIPQEGD------VLRQILNAGADHVLHKVL 174
+F+ V +R +Q E K + +G + L+ + + +
Sbjct: 125 VFAKYNV--SRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWV--ALDVCLSYKVQCKM 180
Query: 175 ----LW------GKEESELDRLNSRLTQL------YYDNLLSVTEPMEGLQEW------- 211
W E+ L+ L L Q+ D+ ++ + +Q
Sbjct: 181 DFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKS 240
Query: 212 ---------LDAVSSARIPCAVVSGLD---------RRKMVEALERMGLLKYFQ-AIVSE 252
L V +A+ + + R K V + + ++
Sbjct: 241 KPYENCLLVLLNVQNAKA----WNAFNLSCKILLTTRFKQV--TDFLSAATTTHISLDHH 294
Query: 253 EDGM---ESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGA----HR 305
+ E + L + +D PR + +I
Sbjct: 295 SMTLTPDEVKS--LLLKYLDCR--------PQDLPR---EVLTTNPRRLSIIAESIRDGL 341
Query: 306 A----YDLVQADLAVANFNELSVINL-----RRLFANKGSTFMERQKQIVEKVPPKRKLT 356
A + V D + E S+ L R++F ++ S F +P L+
Sbjct: 342 ATWDNWKHVNCD-KLTTIIESSLNVLEPAEYRKMF-DRLSVFPPS-----AHIPTIL-LS 393
Query: 357 I 357
+
Sbjct: 394 L 394
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 49.1 bits (116), Expect = 2e-06
Identities = 55/369 (14%), Positives = 101/369 (27%), Gaps = 98/369 (26%)
Query: 3 QMDCTYSNIRSTSLLIPSRPTLSSAHHLFFPSTLKLSKFKR--LVIRNACGFDENGSFNG 60
Q+D +++ S I R A LK ++ LV+ N + ++N
Sbjct: 208 QIDPNWTSRSDHSSNIKLRIHSIQAELRRL---LKSKPYENCLLVLLNVQ--NAK-AWNA 261
Query: 61 FPI-------TPNKLFMQEAIGAEYGEGFETFRQDGPLKVDVDFLNDRLQEGFLK--RIR 111
F + T K A D ++ LK R
Sbjct: 262 FNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMT-------LTPDEVKSLLLKYLDCR 314
Query: 112 YAMKPDEA-------YGLIFSWDVVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNA 164
P E +I + + D A + WK + ++
Sbjct: 315 PQDLPREVLTTNPRRLSII--AESIRDGLA-TWDNWKHVNCDK----------------- 354
Query: 165 GADHVLHKVLLWGKEESELDRLNSRLTQLYYDNLL----SVTEPMEGLQE-WLDAVSSAR 219
L ++ ES L+ L + +D L S P L W D
Sbjct: 355 -----LTTII-----ESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFD--VIKS 402
Query: 220 IPCAVVSGLDRRKMVE---ALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRK--P 274
VV+ L + +VE + + + + + + ++ HR + + +
Sbjct: 403 DVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYAL-HRSIVDHYNIPKTFDS 461
Query: 275 SKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNELSVINLRRLFANK 334
+ D +H + L + R +F +
Sbjct: 462 DDLIPPYLD---------------QYFYSHIGHHLKNIEHP-ERMTL-----FRMVFLDF 500
Query: 335 GSTFMERQK 343
F+E QK
Sbjct: 501 R--FLE-QK 506
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A Length = 260 | Back alignment and structure |
|---|
Score = 51.0 bits (122), Expect = 2e-07
Identities = 39/237 (16%), Positives = 70/237 (29%), Gaps = 18/237 (7%)
Query: 106 FLKRIRYAMKPDEAYGLIFS-WDVVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNA 164
R M E L+ S + + + +L+ E +R
Sbjct: 32 TAGASRRGML--EVIKLLQSKYHYKEEAEIICDKVQVKLSKECFHPYSTCITDVRT---- 85
Query: 165 GADHVLHKVLLWGKEESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAV 224
+ + K ++ +L L+ L + ++ L + + +
Sbjct: 86 ---SHWEEAIQETKGGADNRKLAEECYFLWKSTRLQHMILADDVKAMLTELR-KEVRLLL 141
Query: 225 VSGLDRRKMVEALERMGLLKYFQAIV-SEEDGMES-MAHRFLSAAVKLDRKPSKCVVFED 282
++ DR+ E +E YF AIV E E F L +P CV+ D
Sbjct: 142 LTNGDRQTQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCVMVGD 201
Query: 283 DPRA-ITAAHNCTMMAVGLI---GAHRAYDLVQADLAVANFNELSVINLRRLFANKG 335
I N + A I G V++ EL + L+ +
Sbjct: 202 TLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLELPAL-LQSIDCKVS 257
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} Length = 226 | Back alignment and structure |
|---|
Score = 49.9 bits (120), Expect = 3e-07
Identities = 26/190 (13%), Positives = 58/190 (30%), Gaps = 15/190 (7%)
Query: 142 QLAFEE-GKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLYYDNLLS 200
+ + + ++ L + + + +E + +
Sbjct: 27 KYSLNKFDIQVEDL-SSLNKFVGPPLKTSFMEYY--NFDEETATVAIDYYRDYFKAKGMF 83
Query: 201 VTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMA 260
+ +G++ L ++ V + + LE L YF AIV +
Sbjct: 84 ENKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDAIVGSSLDGKLST 143
Query: 261 HR--FLSAAVKLDRKPSKCVVFED---DPRAITAAHNCTMMAVGLI-GAHRAYDLVQ--A 312
A L+ K ++ D D + A + ++G+ G +L A
Sbjct: 144 KEDVIRYAMESLNIKSDDAIMIGDREYD---VIGALKNNLPSIGVTYGFGSYEELKNAGA 200
Query: 313 DLAVANFNEL 322
+ V + +EL
Sbjct: 201 NYIVNSVDEL 210
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} Length = 240 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 5e-07
Identities = 29/156 (18%), Positives = 59/156 (37%), Gaps = 5/156 (3%)
Query: 182 ELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMG 241
E + L R ++ ++ + + + M +E L+ + + + ++S R + G
Sbjct: 86 EDEALAERFSEDFFAIIPTKSGLMPHAKEVLEYL-APQYNLYILSNGFRELQSRKMRSAG 144
Query: 242 LLKYFQAIV-SEEDGME-SMAHRFLSAAVKLDRKPSKCVVFEDDPRA-ITAAHNCTMMAV 298
+ +YF+ I+ SE+ G+ F A + + ++ D A IT AH M
Sbjct: 145 VDRYFKKIILSEDLGVLKPRPEIFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQA 204
Query: 299 GLIGAHRAYDLVQADLAVANFNELSVINLRRLFANK 334
R Q + + EL + L +
Sbjct: 205 FYNVTERTVFPFQPTYHIHSLKELMNL-LEGHHHHH 239
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} Length = 189 | Back alignment and structure |
|---|
Score = 48.3 bits (115), Expect = 7e-07
Identities = 19/133 (14%), Positives = 43/133 (32%), Gaps = 13/133 (9%)
Query: 176 WGKEESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVS-GLDRRKMV 234
G+ L+ + + + + + +E L+ V A++S V
Sbjct: 10 MGET---LNTVPNTRYDHHPLDTYPEVVLRKNAKETLEKVKQLGFKQAILSNTATSDTEV 66
Query: 235 --EALERMGLLKYFQAIVSEEDGMESMAHR------FLSAAVKLDRKPSKCVVFEDDPRA 286
L G++ YF I + ++ F L ++ V+ + +
Sbjct: 67 IKRVLTNFGIIDYFDFIYASNSELQPGKMEKPDKTIFDFTLNALQIDKTEAVMVGNTFES 126
Query: 287 -ITAAHNCTMMAV 298
I A+ + A+
Sbjct: 127 DIIGANRAGIHAI 139
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 Length = 210 | Back alignment and structure |
|---|
Score = 48.3 bits (116), Expect = 7e-07
Identities = 23/188 (12%), Positives = 53/188 (28%), Gaps = 16/188 (8%)
Query: 142 QLAFEE-GKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLYYDNLLS 200
F+E G P + + + L + ++ Y +
Sbjct: 27 TYTFKELGVPSPDAKTIRGFMGP-PLESSFATCL----SKDQISEAVQIYRSYYKAKGIY 81
Query: 201 VTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMA 260
+ + + L+ +S + P + + D + + + + +F I A
Sbjct: 82 EAQLFPQIIDLLEELS-SSYPLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSSPEAPHKA 140
Query: 261 HRFLSAAVKLDRKPSKCVVFED---DPRAITAAHNCTMMAVGLI-GAHRAYDLVQ--ADL 314
A P + ++ D D + A + + + G DL+ D
Sbjct: 141 DVIHQALQTHQLAPEQAIIIGDTKFD---MLGARETGIQKLAITWGFGEQADLLNYQPDY 197
Query: 315 AVANFNEL 322
E+
Sbjct: 198 IAHKPLEV 205
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} Length = 220 | Back alignment and structure |
|---|
Score = 48.2 bits (115), Expect = 9e-07
Identities = 39/204 (19%), Positives = 64/204 (31%), Gaps = 21/204 (10%)
Query: 131 DTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNA----------GADHVLHKVLLWGKEE 180
+ + Q+ + G ++ V R A G +HV K L+
Sbjct: 16 GFKPVFYEKVYQVLKDNGYDLDLR-KVFRAYAKAMGMINYPDEDGLEHVDPKDFLYILGI 74
Query: 181 SELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERM 240
+RL L + + + E+L+ + S A+VS R + LE+
Sbjct: 75 YPSERLVKELKEADIRD--GEAFLYDDTLEFLEGLKSNGYKLALVSNASPR-VKTLLEKF 131
Query: 241 GLLKYFQAIV-SEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRA-ITAAHNCTMMAV 298
L KYF A+ S E + A L + V D A + +
Sbjct: 132 DLKKYFDALALSYEIKAVKPNPKIFGFA--LAKVGYPAVHVGDIYELDYIGAKRSYVDPI 189
Query: 299 GLIGAHRAYDLVQADLAVANFNEL 322
L+ + Y V N E
Sbjct: 190 -LLDRYDFYP--DVRDRVKNLREA 210
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} Length = 263 | Back alignment and structure |
|---|
Score = 48.2 bits (115), Expect = 1e-06
Identities = 33/219 (15%), Positives = 69/219 (31%), Gaps = 20/219 (9%)
Query: 117 DEAYGLIFSWDVVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVL-L 175
EAY + + ++Q + P G V+ + L
Sbjct: 20 GEAYATKARAHGLEVEPSALEQGFRQAYRAQSHSFPNYGLSHGLTSRQWWLDVVLQTFHL 79
Query: 176 WGKEESELDRLNSRLTQLYYDNLLSVT--EPMEGLQEWLDAVSSARIPCAVVSGLDRRKM 233
G ++++ + + + Y + + ++G ++ L + + AV+S DRR +
Sbjct: 80 AGVQDAQAV---APIAEQLYKDFSHPCTWQVLDGAEDTLRECRTRGLRLAVISNFDRR-L 135
Query: 234 VEALERMGLLKYFQAIV-SEEDGME----SMAHRFLSAAVKLDRKPSKCVVFEDDPRA-I 287
L +GL ++F ++ SE G + F A +P D+
Sbjct: 136 EGILGGLGLREHFDFVLTSEAAGWPKPDPRI---FQEALRLAHMEPVVAAHVGDNYLCDY 192
Query: 288 TAAHNCTMMAV----GLIGAHRAYDLVQADLAVANFNEL 322
M + D V + + + L
Sbjct: 193 QGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPSLAHL 231
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} Length = 251 | Back alignment and structure |
|---|
Score = 47.7 bits (113), Expect = 2e-06
Identities = 22/138 (15%), Positives = 48/138 (34%), Gaps = 6/138 (4%)
Query: 189 RLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQA 248
R+ ++ L E + G++E + A++ A +++ D + +E+ GL F
Sbjct: 98 RIVEIGRATLQHPVEVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLFPR 156
Query: 249 IVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRA-ITAAHNCTMMAVGLIGAHRAY 307
I + R LS + D + V+ + R+ + + +
Sbjct: 157 IEVVSEKDPQTYARVLS---EFDLPAERFVMIGNSLRSDVEPVLAIGGWGI-YTPYAVTW 212
Query: 308 DLVQADLAVANFNELSVI 325
Q A+ L +
Sbjct: 213 AHEQDHGVAADEPRLREV 230
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} Length = 240 | Back alignment and structure |
|---|
Score = 47.2 bits (113), Expect = 2e-06
Identities = 22/181 (12%), Positives = 55/181 (30%), Gaps = 14/181 (7%)
Query: 151 IPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLYYDNLLSVTEPMEGLQE 210
I ++ + L Q + + E+ + + + + D + + E ++E
Sbjct: 60 IKEDLENLDQFIGPPLHDTFKEYY--KFEDKKAKEAVEKYREYFADKGIFENKIYENMKE 117
Query: 211 WLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHR--FLSAAV 268
L+ + V + L + +YF+ I +
Sbjct: 118 ILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYIAGSNLDGTRVNKNEVIQYVLD 177
Query: 269 KLDRKPSKCVVF----EDDPRAITAAHNCTMMAVGLI-GAHRAYDLVQ--ADLAVANFNE 321
+ K V+ + D I A + ++G++ G ++ + V N
Sbjct: 178 LCNVKDKDKVIMVGDRKYD---IIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVENVES 234
Query: 322 L 322
+
Sbjct: 235 I 235
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} Length = 240 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 3e-06
Identities = 29/159 (18%), Positives = 48/159 (30%), Gaps = 22/159 (13%)
Query: 177 GKEESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVS----GLDRRK 232
++E++R+ Y D+ T P G+ + + + + AVVS
Sbjct: 84 AVTQTEVNRVLEVFKPYYADHCQIKTGPFPGILDLMKNLRQKGVKLAVVSNKPNEA---- 139
Query: 233 MVEALERMGLLKYFQAIVSEEDGMESMAHR------FLSAAVKLDRKPSKCVVFEDDPRA 286
V+ L F + E+ G R L KCV D
Sbjct: 140 -VQVLVEELFPGSFDFALGEKSG----IRRKPAPDMTSECVKVLGVPRDKCVYIGDSEID 194
Query: 287 ITAAHNCTMMAVGLI---GAHRAYDLVQADLAVANFNEL 322
I A N M + + + A + V +L
Sbjct: 195 IQTARNSEMDEIAVNWGFRSVPFLQKHGATVIVDTAEKL 233
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} Length = 231 | Back alignment and structure |
|---|
Score = 45.9 bits (108), Expect = 6e-06
Identities = 35/224 (15%), Positives = 68/224 (30%), Gaps = 18/224 (8%)
Query: 122 LIFSWD-VVADTRALKLNAWKQLAFEEGKEI-PQEGDVLRQILNAGADHVLHKVLLWGKE 179
+F D + D + + + E G + + ++ + L +
Sbjct: 14 FLFDCDNTLLDNDHVLADLRAHMMREFGAQNSARYWEIFETLRTELGYADYLGALQRYRL 73
Query: 180 ESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALER 239
E D ++ D + + G L + AR P ++S D + R
Sbjct: 74 EQPRDTRLLLMSSFLIDYPFA-SRVYPGALNALRHLG-ARGPTVILSDGDVVFQPRKIAR 131
Query: 240 MGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVG 299
GL + V + + + V V+ +D R + A +
Sbjct: 132 SGLWDEVEGRV-----LIYIHKELMLDQVMECYPARHYVMVDDKLRILAAMKKAWGARLT 186
Query: 300 LI---GAHRAYD------LVQADLAVANFNELSVINLRRLFANK 334
+ H A+D AD+ V +L ++ L A K
Sbjct: 187 TVFPRQGHYAFDPKEISSHPPADVTVERIGDLVEMDAEWLLAEK 230
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A Length = 261 | Back alignment and structure |
|---|
Score = 45.9 bits (108), Expect = 6e-06
Identities = 29/205 (14%), Positives = 65/205 (31%), Gaps = 7/205 (3%)
Query: 124 FSWDVVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESEL 183
DV + + +A A D L+Q++ A D+V ++ L K + L
Sbjct: 52 CQQDVSLLRKQAEEDAHLDGAVPIPAASGNGVDDLQQMIQAVVDNVCWQMSLDRKT-TAL 110
Query: 184 DRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDR---RKMVEALERM 240
+L + + + E + + A + + S + +
Sbjct: 111 KQLQGHMWRAAFTAGRMKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEG 170
Query: 241 GLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGL 300
+L+ + G + + + A + + + D R +AA + +
Sbjct: 171 DILELVDGHFDTKIGHKVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVV 230
Query: 301 I---GAHRAYDLVQADLAVANFNEL 322
+ A D + +F+EL
Sbjct: 231 VRPGNAGLTDDEKTYYSLITSFSEL 255
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} PDB: 1x42_A Length = 234 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 1e-05
Identities = 25/138 (18%), Positives = 50/138 (36%), Gaps = 5/138 (3%)
Query: 189 RLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQA 248
++ E + E L ++ + +++ D + + L+ +G+ F +
Sbjct: 86 NFWEISLRMSQRYGELYPEVVEVLKSLKG-KYHVGMITDSDTEQAMAFLDALGIKDLFDS 144
Query: 249 IV-SEEDGME-SMAHRFLSAAVKLDRKPSKCVVFEDDPRA-ITAAHNCTMMAVGLIGAHR 305
I SEE G F A K K + V D+P + N M ++ L
Sbjct: 145 ITTSEEAGFFKPHPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGE 204
Query: 306 AYD-LVQADLAVANFNEL 322
+ + D V++ E+
Sbjct: 205 KREFWDKCDFIVSDLREV 222
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A Length = 238 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 2e-05
Identities = 33/213 (15%), Positives = 72/213 (33%), Gaps = 22/213 (10%)
Query: 118 EAYGLIFSWDVVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWG 177
E + + D+ A + + W+ AFEEG ++ ++ +V+ +A
Sbjct: 34 EDQNIPLTNDMKAQYKTINQGLWR--AFEEG-KMTRD-EVVNTRFSALLKEYG------- 82
Query: 178 KEESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEAL 237
+ + L Q Y L + ++G + + + + +V+ + L
Sbjct: 83 -----YEADGALLEQKYRRFLEEGHQLIDGAFDLISNLQ-QQFDLYIVTNGVSHTQYKRL 136
Query: 238 ERMGLLKYFQAIV-SEEDGMES-MAHRFLSAAVKLDR-KPSKCVVFEDDPRA-ITAAHNC 293
GL +F+ I SE+ G + M F ++ + ++ D A I
Sbjct: 137 RDSGLFPFFKDIFVSEDTGFQKPMKEYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLA 196
Query: 294 TMMAVGLIGAHRAYDL-VQADLAVANFNELSVI 325
+ + + + + EL I
Sbjct: 197 GLDTCWMNPDMKPNVPEIIPTYEIRKLEELYHI 229
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* Length = 240 | Back alignment and structure |
|---|
Score = 43.0 bits (101), Expect = 6e-05
Identities = 35/218 (16%), Positives = 69/218 (31%), Gaps = 24/218 (11%)
Query: 119 AYGLIFSWDVVADTRALKL--------NAW--KQLAFEEGKEIPQEGDVLRQILNAGADH 168
AYG + A ++ W +QL + + + + Q+ +
Sbjct: 21 AYGTLLDVHSAVMRNADEVGASAEALSMLWRQRQLEYSWTRTLMHQYADFWQLTDEALTF 80
Query: 169 VLHKVLLWGKEESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGL 228
L + + DRL S +L E L+ + SA A++S
Sbjct: 81 AL-RTYHLEDRKGLKDRLMSAYKEL---------SAYPDAAETLEKLKSAGYIVAILSNG 130
Query: 229 DRRKMVEALERMGLLKYFQAIVSEEDGMESMAHR--FLSAAVKLDRKPSKCVVFEDDPRA 286
+ + AL+ L + + +S +D + A +L P++ +
Sbjct: 131 NDEMLQAALKASKLDRVLDSCLSADDLKIYKPDPRIYQFACDRLGVNPNEVCFVSSNAWD 190
Query: 287 ITAAHNCTMMAVGL--IGAHRAYDLVQADLAVANFNEL 322
+ A V + G Y+ V + +EL
Sbjct: 191 LGGAGKFGFNTVRINRQGNPPEYEFAPLKHQVNSLSEL 228
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} Length = 234 | Back alignment and structure |
|---|
Score = 42.5 bits (100), Expect = 9e-05
Identities = 24/112 (21%), Positives = 41/112 (36%), Gaps = 5/112 (4%)
Query: 189 RLTQLYYDNLLSVTEPMEGLQEWLDAVS-SARIPCAVVSGLDRRKMVEALERMGLLKYFQ 247
++ L L E + G++E L + + + V + D LER GL YF
Sbjct: 91 QIVDLGKSLLKMPIELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFD 150
Query: 248 AIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRA-ITAAHNCTMMAV 298
I D E +L L PS+ ++ + ++ I + V
Sbjct: 151 HIEVMSDKTE---KEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGV 199
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} Length = 200 | Back alignment and structure |
|---|
Score = 40.4 bits (95), Expect = 3e-04
Identities = 17/120 (14%), Positives = 38/120 (31%), Gaps = 13/120 (10%)
Query: 194 YYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIV-SE 252
+ + ++P + + R ++ R + GL ++ A S
Sbjct: 77 FRAVMEEQSQPRPEVLALARDLG-QRYRMYSLNNEGRDLNEYRIRTFGLGEFLLAFFTSS 135
Query: 253 EDGMESMAHR------FLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRA 306
G+ + +P + V+ +D + + AA M AV + A +
Sbjct: 136 ALGV-----MKPNPAMYRLGLTLAQVRPEEAVMVDDRLQNVQAARAVGMHAVQCVDAAQL 190
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 361 | |||
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 99.97 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 99.97 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 99.96 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 99.96 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 99.96 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 99.96 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 99.96 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 99.96 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 99.95 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 99.95 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 99.95 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 99.95 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 99.95 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 99.95 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 99.95 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 99.95 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 99.95 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 99.95 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 99.95 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 99.94 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 99.94 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 99.94 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 99.94 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 99.94 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 99.93 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 99.93 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 99.93 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 99.93 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 99.93 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 99.93 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 99.93 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 99.93 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.92 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 99.92 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 99.92 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 99.92 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 99.92 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 99.91 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 99.91 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 99.91 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 99.91 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 99.91 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 99.91 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 99.91 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 99.9 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 99.9 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 99.9 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 99.9 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 99.89 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 99.89 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 99.89 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 99.89 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 99.89 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 99.89 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 99.87 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 99.87 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 99.87 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 99.87 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 99.86 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 99.86 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 99.86 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 99.85 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.85 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 99.85 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 99.84 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 99.83 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 99.83 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.82 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 99.82 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 99.81 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 99.81 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 99.81 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.81 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 99.8 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 99.79 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 99.79 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.78 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 99.78 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 99.78 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 99.77 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 99.75 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.75 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 99.73 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 99.73 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.57 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 99.72 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.72 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.71 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.7 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.7 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 99.7 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 99.69 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.69 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 99.68 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 99.68 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.68 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.67 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 99.66 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.66 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.63 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 99.63 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 99.6 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 99.59 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 99.59 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 99.57 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.56 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 99.55 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 99.54 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 99.53 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.5 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 99.47 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.46 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 99.45 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 99.43 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 99.42 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.42 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 99.41 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 99.4 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 99.39 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 99.37 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 99.34 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.33 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 99.28 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.24 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 99.24 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.22 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 99.18 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 99.13 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 99.08 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 99.07 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 99.05 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 99.01 | |
| 2jc9_A | 555 | Cytosolic purine 5'-nucleotidase; cytosolic 5-prim | 98.97 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 98.93 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 98.91 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 98.86 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.83 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 98.78 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 98.77 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 98.72 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.68 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 98.61 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 98.47 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 98.44 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 98.15 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 98.12 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 98.07 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 98.0 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 97.8 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 97.79 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 97.74 | |
| 4g63_A | 470 | Cytosolic IMP-GMP specific 5'-nucleotidase; struct | 97.73 | |
| 3qle_A | 204 | TIM50P; chaperone, mitochondrion, preprotein trans | 97.64 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 97.46 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 97.25 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 97.16 | |
| 3geb_A | 274 | EYES absent homolog 2; hydrolase, activator, alter | 96.97 | |
| 3ef0_A | 372 | RNA polymerase II subunit A C-terminal domain phos | 96.88 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 96.7 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 96.53 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 96.32 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 95.91 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 95.75 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 94.92 | |
| 3ef1_A | 442 | RNA polymerase II subunit A C-terminal domain phos | 94.66 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 94.48 | |
| 3shq_A | 320 | UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila | 94.38 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 93.22 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 92.19 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 90.19 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 87.08 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 84.74 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 82.48 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 81.25 |
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-29 Score=226.22 Aligned_cols=209 Identities=23% Similarity=0.316 Sum_probs=165.7
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHHHHHHHHHh
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLYYDN 197 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~~ 197 (361)
+|+||||+| ||+|+...+.++|.++++++|++.+. .....+.+......+.............+.+...+.+.+...
T Consensus 1 IkAViFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (216)
T 3kbb_A 1 MEAVIFDMDGVLMDTEPLYFEAYRRVAESYGKPYTE--DLHRRIMGVPEREGLPILMEALEIKDSLENFKKRVHEEKKRV 78 (216)
T ss_dssp CCEEEEESBTTTBCCGGGHHHHHHHHHHHTTCCCCH--HHHHHHTTSCHHHHHHHHHHHTTCCSCHHHHHHHHHHHHHHH
T ss_pred CeEEEECCCCcccCCHHHHHHHHHHHHHHcCCCCCH--HHHHHHhccchhhhhhhhhhcccchhhHHHHHHHHHHHHHHH
Confidence 589999999 99999999999999999999987654 355667777777666655444333333344444444444444
Q ss_pred cccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcCCCCC
Q 018088 198 LLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDRKPS 275 (361)
Q Consensus 198 l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi~p~ 275 (361)
......++||+.++|+.|++.|++++++||+.+..+...++.+|+.++||.++++++++.+| |++|..+++++|++|+
T Consensus 79 ~~~~~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~fd~~~~~~~~~~~KP~p~~~~~a~~~lg~~p~ 158 (216)
T 3kbb_A 79 FSELLKENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNVVPE 158 (216)
T ss_dssp HHHHCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECGGGSSSCTTSTHHHHHHHHHHTCCGG
T ss_pred HHHhcccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccccccccccccCCCcccHHHHHHHHHhhCCCcc
Confidence 44455789999999999999999999999999999999999999999999999999987776 5799999999999999
Q ss_pred cEEEEcCChHHHHHHHHcCCeEEE-E-eCCCCcccccC-cceEeCChhhhHHHHHHh
Q 018088 276 KCVVFEDDPRAITAAHNCTMMAVG-L-IGAHRAYDLVQ-ADLAVANFNELSVINLRR 329 (361)
Q Consensus 276 ~~v~IGDs~~Di~aA~~aG~~~v~-V-~g~~~~~~l~~-ad~vi~sl~EL~~~ll~~ 329 (361)
+|+||||+.+|+.+|+++||.+|+ | +|.+....+.. ....+.+.+|+...+.+.
T Consensus 159 e~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~~i~~~~eli~~l~eL 215 (216)
T 3kbb_A 159 KVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALVKPEEILNVLKEV 215 (216)
T ss_dssp GEEEEECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCSEEECGGGHHHHHHHH
T ss_pred ceEEEecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCcEECCHHHHHHHHHHH
Confidence 999999999999999999999985 5 44444444432 233455788887765543
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.2e-29 Score=228.94 Aligned_cols=198 Identities=24% Similarity=0.370 Sum_probs=158.7
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHcc-----CCChHHHHHHHHHHHH
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLW-----GKEESELDRLNSRLTQ 192 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~-----~~~~~~~~~l~~~~~~ 192 (361)
+|+||||+| ||+|++..+..+|.++++++|++.+.. ....+.+......+..+... .........+......
T Consensus 26 IKaViFDlDGTLvDs~~~~~~a~~~~~~~~g~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (250)
T 4gib_A 26 IEAFIFDLDGVITDTAYYHYMAWRKLAHKVGIDIDTK--FNESLKGISRMESLDRILEFGNKKYSFSEEEKVRMAEEKNN 103 (250)
T ss_dssp CCEEEECTBTTTBCCHHHHHHHHHHHHHTTTCCCCTT--GGGGTTTCCHHHHHHHHHHHTTCTTTSCHHHHHHHHHHHHH
T ss_pred hheeeecCCCcccCCHHHHHHHHHHHHHHcCCCCCHH--HHHHHhCcchHHHHHHhhhhhcCCCCCCHHHHHHHHHHHHH
Confidence 899999999 999999999999999999999876543 23445566665555554322 2234444455555555
Q ss_pred HHHHhccc--CCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCCh--HHHHHHHH
Q 018088 193 LYYDNLLS--VTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMA--HRFLSAAV 268 (361)
Q Consensus 193 ~~~~~l~~--~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP--~~~~~~~~ 268 (361)
.+...... ...++||+.++++.|+++|++++++|+. ......++.+|+.++||.+++++++..+|| ++|+.+++
T Consensus 104 ~~~~~~~~~~~~~~~p~~~~ll~~Lk~~g~~i~i~~~~--~~~~~~L~~~gl~~~Fd~i~~~~~~~~~KP~p~~~~~a~~ 181 (250)
T 4gib_A 104 YYVSLIDEITSNDILPGIESLLIDVKSNNIKIGLSSAS--KNAINVLNHLGISDKFDFIADAGKCKNNKPHPEIFLMSAK 181 (250)
T ss_dssp HHHHHHTTCCGGGSCTTHHHHHHHHHHTTCEEEECCSC--TTHHHHHHHHTCGGGCSEECCGGGCCSCTTSSHHHHHHHH
T ss_pred HHHHHHhhccccccchhHHHHHHHHHhccccccccccc--chhhhHhhhcccccccceeecccccCCCCCcHHHHHHHHH
Confidence 55544322 2357999999999999999999998876 446778999999999999999999887775 79999999
Q ss_pred HcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhhhH
Q 018088 269 KLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNELS 323 (361)
Q Consensus 269 klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~EL~ 323 (361)
++|++|++||||||+++|+.+|++|||.+|+|.. ...+.+||++++++.||.
T Consensus 182 ~lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~---~~~~~~ad~vi~~l~eL~ 233 (250)
T 4gib_A 182 GLNVNPQNCIGIEDASAGIDAINSANMFSVGVGN---YENLKKANLVVDSTNQLK 233 (250)
T ss_dssp HHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESC---TTTTTTSSEEESSGGGCC
T ss_pred HhCCChHHeEEECCCHHHHHHHHHcCCEEEEECC---hhHhccCCEEECChHhCC
Confidence 9999999999999999999999999999999843 345567999999999994
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.96 E-value=5.1e-29 Score=222.01 Aligned_cols=202 Identities=14% Similarity=0.185 Sum_probs=160.3
Q ss_pred CceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHHHHHHHHH
Q 018088 118 EAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLYYD 196 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~ 196 (361)
.+|+|+||+| ||+|+...+..++.++++++|.+...... ...+.|.+....+... .......++...+.+.+..
T Consensus 3 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 77 (210)
T 2ah5_A 3 SITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVPSPDAKT-IRGFMGPPLESSFATC----LSKDQISEAVQIYRSYYKA 77 (210)
T ss_dssp TCCEEEECSBTTTEECHHHHHHHHHHHHHHHTCCCCCHHH-HHHTSSSCHHHHHHTT----SCGGGHHHHHHHHHHHHHH
T ss_pred CCCEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCCCCHHH-HHHHcCccHHHHHHHH----cCHHHHHHHHHHHHHHHHH
Confidence 3789999999 99999999999999999999987643332 3445566665555443 2233344555555555554
Q ss_pred hcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCc
Q 018088 197 NLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSK 276 (361)
Q Consensus 197 ~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~ 276 (361)
.......++||+.++|+.|++ |++++++||+....+...++.+|+..+|+.+++++...++||++|+.+++++|++|++
T Consensus 78 ~~~~~~~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~Kp~p~~~~~~~~~lg~~p~~ 156 (210)
T 2ah5_A 78 KGIYEAQLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSSPEAPHKADVIHQALQTHQLAPEQ 156 (210)
T ss_dssp TGGGSCEECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECSSCCSHHHHHHHHHHHTTCCGGG
T ss_pred hccCCCCCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhheeeeecCCCCCCCChHHHHHHHHHcCCCccc
Confidence 433345789999999999999 9999999999999999999999999999999988732345678999999999999999
Q ss_pred EEEEcCChHHHHHHHHcCCeEEEEe-CCCCcccc--cCcceEeCChhhhHHH
Q 018088 277 CVVFEDDPRAITAAHNCTMMAVGLI-GAHRAYDL--VQADLAVANFNELSVI 325 (361)
Q Consensus 277 ~v~IGDs~~Di~aA~~aG~~~v~V~-g~~~~~~l--~~ad~vi~sl~EL~~~ 325 (361)
|++|||+.+|+.+|++||+.+|+|. +.....++ ..+|++++++.||..+
T Consensus 157 ~~~vgDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~~~~el~~~ 208 (210)
T 2ah5_A 157 AIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLAY 208 (210)
T ss_dssp EEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHHHHH
T ss_pred EEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEECCHHHHHHH
Confidence 9999999999999999999999994 43334343 3699999999998764
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-28 Score=220.72 Aligned_cols=211 Identities=18% Similarity=0.197 Sum_probs=179.5
Q ss_pred CCCceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHHHHHHH
Q 018088 116 PDEAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLY 194 (361)
Q Consensus 116 ~~~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~ 194 (361)
...+|+|+||+| ||+++...+..++.++++++|... .........+......+..++...........+...+.+.+
T Consensus 16 ~~~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (237)
T 4ex6_A 16 AAADRGVILDLDGTLADTPAAIATITAEVLAAMGTAV--SRGAILSTVGRPLPASLAGLLGVPVEDPRVAEATEEYGRRF 93 (237)
T ss_dssp -CCCEEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCC--CHHHHHHHTTSCHHHHHHHHHTSCTTSHHHHHHHHHHHHHH
T ss_pred cccCCEEEEcCCCCCcCCHHHHHHHHHHHHHHcCCCC--CHHHHHHhcCccHHHHHHHHhCCCCCHHHHHHHHHHHHHHH
Confidence 356899999999 999999999999999999999333 33345667788888888888777666777777777777777
Q ss_pred HHhcc--cCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHc
Q 018088 195 YDNLL--SVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKL 270 (361)
Q Consensus 195 ~~~l~--~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~kl 270 (361)
.+.+. ....++||+.++|+.|++.|++++++||+....+...++.+|+..+|+.+++++++...| |++|..+++++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~l 173 (237)
T 4ex6_A 94 GAHVRAAGPRLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTVIAGDDSVERGKPHPDMALHVARGL 173 (237)
T ss_dssp HHHHHHHGGGGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSEEECTTTSSSCTTSSHHHHHHHHHH
T ss_pred HHhcccccCCccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheeeEEeCCCCCCCCCCHHHHHHHHHHc
Confidence 77665 566889999999999999999999999999999999999999999999999999876555 68999999999
Q ss_pred CCCCCcEEEEcCChHHHHHHHHcCCeEEEEe-CCCCccccc--CcceEeCChhhhHHHHHH
Q 018088 271 DRKPSKCVVFEDDPRAITAAHNCTMMAVGLI-GAHRAYDLV--QADLAVANFNELSVINLR 328 (361)
Q Consensus 271 gi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~-g~~~~~~l~--~ad~vi~sl~EL~~~ll~ 328 (361)
|++|++|++|||+.+|+.||+++|+.+|+|. +......+. .||+++.++.||..++.+
T Consensus 174 g~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~l~~ 234 (237)
T 4ex6_A 174 GIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDSFPAAVTAVLD 234 (237)
T ss_dssp TCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEESSHHHHHHHHHH
T ss_pred CCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEECCHHHHHHHHHc
Confidence 9999999999999999999999999999994 334334432 699999999999987654
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-28 Score=222.42 Aligned_cols=206 Identities=19% Similarity=0.193 Sum_probs=166.8
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHHhCCC-CCchHHHHHHHhcCCHHHHHHHHH---------------------c
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFEEGKE-IPQEGDVLRQILNAGADHVLHKVL---------------------L 175 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~-~~~~~~~~~~~~g~~~~~~l~~~l---------------------~ 175 (361)
+++|+||+| ||+|+...+..++.++++++|++ .... .....+.|.+....+.... .
T Consensus 4 ~k~viFDlDGTL~ds~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (240)
T 2hi0_A 4 YKAAIFDMDGTILDTSADLTSALNYAFEQTGHRHDFTV-EDIKNFFGSGVVVAVTRALAYEAGSSRESLVAFGTKDEQIP 82 (240)
T ss_dssp CSEEEECSBTTTEECHHHHHHHHHHHHHHTTSCCCCCH-HHHHHHCSSCHHHHHHHHHHHHTTCCHHHHTTTTSTTCCCC
T ss_pred ccEEEEecCCCCccCHHHHHHHHHHHHHHcCCCCCCCH-HHHHHhcCccHHHHHHHHHHhcccccccccccccccccccC
Confidence 689999999 99999999999999999999986 3322 2345566777666665543 1
Q ss_pred cCCChHHHHHHHHHHHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCC
Q 018088 176 WGKEESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDG 255 (361)
Q Consensus 176 ~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~ 255 (361)
..........+...+.+.|.........++||+.++|+.|+++|++++++||+....+...++.+|+. +|+.+++++++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~f~~~~~~~~~ 161 (240)
T 2hi0_A 83 EAVTQTEVNRVLEVFKPYYADHCQIKTGPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-SFDFALGEKSG 161 (240)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHTSSSSCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-TCSEEEEECTT
T ss_pred CCCCHHHHHHHHHHHHHHHHHhhhhcCCcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-ceeEEEecCCC
Confidence 22344555566666666666554455678999999999999999999999999999999999999998 99999999886
Q ss_pred CCC--ChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEe-CCCCcccc--cCcceEeCChhhhHHHH
Q 018088 256 MES--MAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLI-GAHRAYDL--VQADLAVANFNELSVIN 326 (361)
Q Consensus 256 ~~~--KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~-g~~~~~~l--~~ad~vi~sl~EL~~~l 326 (361)
..+ ||++|..+++++|++|++|++|||+.+|+.||++||+.+|+|. +......+ ..||+++.++.|+..++
T Consensus 162 ~~~Kp~p~~~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~~~~~el~~~l 237 (240)
T 2hi0_A 162 IRRKPAPDMTSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIVDTAEKLEEAI 237 (240)
T ss_dssp SCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEECSHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEECCHHHHHHHh
Confidence 554 5689999999999999999999999999999999999999984 33333333 36999999999987764
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-28 Score=224.28 Aligned_cols=183 Identities=26% Similarity=0.380 Sum_probs=147.3
Q ss_pred CCceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCC-----ChHHHHHHHHHH
Q 018088 117 DEAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGK-----EESELDRLNSRL 190 (361)
Q Consensus 117 ~~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~-----~~~~~~~l~~~~ 190 (361)
|++|+||||+| ||+|++..+..+|.++++++|++.+.. ....+.|......+..++.... .......+..+.
T Consensus 3 MkiKaViFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (243)
T 4g9b_A 3 MKLQGVIFDLDGVITDTAHLHFQAWQQIAAEIGISIDAQ--FNESLKGISRDESLRRILQHGGKEGDFNSQERAQLAYRK 80 (243)
T ss_dssp CCCCEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCTT--GGGGGTTCCHHHHHHHHHHHTTCGGGCCHHHHHHHHHHH
T ss_pred ccCcEEEEcCCCcccCCHHHHHHHHHHHHHHcCCCCCHH--HHHHHcCCCHHHHHHHHHHHhhcccchhHHHHHHHHHHH
Confidence 45899999999 999999999999999999999876543 3345667777777666554322 333334444444
Q ss_pred HHHHHHhccc--CCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHH
Q 018088 191 TQLYYDNLLS--VTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSA 266 (361)
Q Consensus 191 ~~~~~~~l~~--~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~ 266 (361)
...+...+.. ...++||+.++++.|+++|++++++||.. .....++.+|+.++||.+++++++..+| |++|+.+
T Consensus 81 ~~~~~~~~~~~~~~~~~pg~~~ll~~L~~~g~~i~i~t~~~--~~~~~l~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a 158 (243)
T 4g9b_A 81 NLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASVSL--NAPTILAALELREFFTFCADASQLKNSKPDPEIFLAA 158 (243)
T ss_dssp HHHHHHHHHTCCGGGBCTTHHHHHHHHHHTTCEEEECCCCT--THHHHHHHTTCGGGCSEECCGGGCSSCTTSTHHHHHH
T ss_pred HHHHHHHHHhcccccccccHHHHHHhhhcccccceeccccc--chhhhhhhhhhccccccccccccccCCCCcHHHHHHH
Confidence 4444443322 23579999999999999999999999974 4677899999999999999999988777 5799999
Q ss_pred HHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCC
Q 018088 267 AVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGA 303 (361)
Q Consensus 267 ~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~ 303 (361)
++++|++|++||+|||+.+|+.+|++|||.+|+|...
T Consensus 159 ~~~lg~~p~e~l~VgDs~~di~aA~~aG~~~I~V~~g 195 (243)
T 4g9b_A 159 CAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIGAG 195 (243)
T ss_dssp HHHHTSCGGGEEEEESSHHHHHHHHHHTCEEEEESTT
T ss_pred HHHcCCChHHEEEEcCCHHHHHHHHHcCCEEEEECCC
Confidence 9999999999999999999999999999999999543
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.9e-28 Score=212.33 Aligned_cols=206 Identities=17% Similarity=0.214 Sum_probs=164.8
Q ss_pred CceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHHHHHHHHH
Q 018088 118 EAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLYYD 196 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~ 196 (361)
.+|+|+||+| ||+++...+..++.++++++|.+..... .....+......+..+............+...+.+.+..
T Consensus 4 m~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (214)
T 3e58_A 4 MVEAIIFDMDGVLFDTEKYYYDRRASFLGQKGISIDHLP--PSFFIGGNTKQVWENILRDEYDKWDVSTLQEEYNTYKQN 81 (214)
T ss_dssp CCCEEEEESBTTTBCCHHHHHHHHHHHHHHTTCCCTTSC--HHHHTTSCGGGCHHHHHGGGGGGSCHHHHHHHHHHHHHH
T ss_pred cccEEEEcCCCCccccHHHHHHHHHHHHHHcCCCCCHHH--HHHHcCCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHH
Confidence 4799999999 9999999999999999999998665432 345556666655555544332222233444444444444
Q ss_pred hccc-CCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcCCC
Q 018088 197 NLLS-VTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDRK 273 (361)
Q Consensus 197 ~l~~-~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi~ 273 (361)
.... ...++||+.++|+.|++.|++++++||+....+...++.+|+..+|+.++++++....| |+.|..+++++|++
T Consensus 82 ~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~ 161 (214)
T 3e58_A 82 NPLPYKELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDIVLSGEEFKESKPNPEIYLTALKQLNVQ 161 (214)
T ss_dssp SCCCHHHHBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGCSSCTTSSHHHHHHHHHHTCC
T ss_pred hhcccCCCcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheeeEeecccccCCCCChHHHHHHHHHcCCC
Confidence 3321 22679999999999999999999999999999999999999999999999999876665 67999999999999
Q ss_pred CCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhhhHHH
Q 018088 274 PSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNELSVI 325 (361)
Q Consensus 274 p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~EL~~~ 325 (361)
|++|++|||+.+|+.||+++|+.++++...........||++++++.||..+
T Consensus 162 ~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~~~~el~~~ 213 (214)
T 3e58_A 162 ASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLDSLTDVLDL 213 (214)
T ss_dssp GGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEESSGGGGGGG
T ss_pred hHHeEEEeccHhhHHHHHHCCCEEEEECCCCccchhccHHHHHHHHHHHHhh
Confidence 9999999999999999999999999996554444447899999999998754
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.5e-27 Score=212.85 Aligned_cols=206 Identities=15% Similarity=0.134 Sum_probs=171.5
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHHHHHHHHHh
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLYYDN 197 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~~ 197 (361)
+|+|+||+| ||+++...+..++.++++++|.+...... .....|......+...+ +.+..........+.+.+...
T Consensus 4 ~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 80 (226)
T 3mc1_A 4 YNYVLFDLDGTLTDSAEGITKSVKYSLNKFDIQVEDLSS-LNKFVGPPLKTSFMEYY--NFDEETATVAIDYYRDYFKAK 80 (226)
T ss_dssp CCEEEECSBTTTBCCHHHHHHHHHHHHHTTTCCCSCGGG-GGGGSSSCHHHHHHHHH--CCCHHHHHHHHHHHHHHHTTT
T ss_pred CCEEEEeCCCccccCHHHHHHHHHHHHHHcCCCCCCHHH-HHHHhCcCHHHHHHHHh--CCCHHHHHHHHHHHHHHHHHh
Confidence 789999999 99999999999999999999987643322 23455667777666655 445555666666666655554
Q ss_pred cccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcCCCCC
Q 018088 198 LLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDRKPS 275 (361)
Q Consensus 198 l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi~p~ 275 (361)
......++||+.++|+.|+++|++++++||+....+...++.+|+..+|+.++++++....| |++|..+++++|++|+
T Consensus 81 ~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~ 160 (226)
T 3mc1_A 81 GMFENKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDAIVGSSLDGKLSTKEDVIRYAMESLNIKSD 160 (226)
T ss_dssp GGGSCCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSSSCSHHHHHHHHHHHHTCCGG
T ss_pred CcccCccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheeeeeccCCCCCCCCCHHHHHHHHHHhCcCcc
Confidence 44556889999999999999999999999999999999999999999999999999877655 6799999999999999
Q ss_pred cEEEEcCChHHHHHHHHcCCeEEEEe-CCCCcccc--cCcceEeCChhhhHHHHH
Q 018088 276 KCVVFEDDPRAITAAHNCTMMAVGLI-GAHRAYDL--VQADLAVANFNELSVINL 327 (361)
Q Consensus 276 ~~v~IGDs~~Di~aA~~aG~~~v~V~-g~~~~~~l--~~ad~vi~sl~EL~~~ll 327 (361)
+|++|||+.+|+.||++||+.+|+|. |......+ ..||++++++.||..++.
T Consensus 161 ~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~s~~el~~~~~ 215 (226)
T 3mc1_A 161 DAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVNSVDELHKKIL 215 (226)
T ss_dssp GEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEESSHHHHHHHHH
T ss_pred cEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEECCHHHHHHHHH
Confidence 99999999999999999999999994 54455554 579999999999998754
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.6e-27 Score=211.65 Aligned_cols=205 Identities=24% Similarity=0.365 Sum_probs=159.6
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHcc-----CCChHHHHHHHHHHHH
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLW-----GKEESELDRLNSRLTQ 192 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~-----~~~~~~~~~l~~~~~~ 192 (361)
+|+|+||+| ||+++...+..++.++++++|++... .....+.|......+..++.. ..+......+...+..
T Consensus 2 ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (233)
T 3nas_A 2 LKAVIFDLDGVITDTAEYHFLAWKHIAEQIDIPFDR--DMNERLKGISREESLESILIFGGAETKYTNAEKQELMHRKNR 79 (233)
T ss_dssp CCEEEECSBTTTBCHHHHHHHHHHHHHHHTTCCCCH--HHHHHTTTCCHHHHHHHHHHHTTCTTTSCHHHHHHHHHHHHH
T ss_pred CcEEEECCCCCcCCCHHHHHHHHHHHHHHcCCCCCH--HHHHHHcCCCHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHH
Confidence 689999999 99999999999999999999988543 344566677777766665543 4456667777777767
Q ss_pred HHHHhcccCC--CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCCh--HHHHHHHH
Q 018088 193 LYYDNLLSVT--EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMA--HRFLSAAV 268 (361)
Q Consensus 193 ~~~~~l~~~~--~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP--~~~~~~~~ 268 (361)
.+.+.+.... .++||+.++|+.|++.|++++++||+.. +...++.+|+..+|+.+++++++...|| ++|..+++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~ 157 (233)
T 3nas_A 80 DYQMLISKLTPEDLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFHAIVDPTTLAKGKPDPDIFLTAAA 157 (233)
T ss_dssp HHHHHHHTCCGGGSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCSEECCC---------CCHHHHHHH
T ss_pred HHHHHHhhcCcCCcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcCEEeeHhhCCCCCCChHHHHHHHH
Confidence 6666554333 3799999999999999999999999854 8889999999999999999998877765 59999999
Q ss_pred HcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhhhHHHHHHhh
Q 018088 269 KLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNELSVINLRRL 330 (361)
Q Consensus 269 klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~EL~~~ll~~l 330 (361)
++|++|++|++|||+.+|+.||+++|+.+|++.+. ..+..||+++.++.|+....+..+
T Consensus 158 ~lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~~~~~---~~~~~ad~v~~s~~el~~~~~~~~ 216 (233)
T 3nas_A 158 MLDVSPADCAAIEDAEAGISAIKSAGMFAVGVGQG---QPMLGADLVVRQTSDLTLELLHEE 216 (233)
T ss_dssp HHTSCGGGEEEEECSHHHHHHHHHTTCEEEECC----------CSEECSSGGGCCHHHHHHH
T ss_pred HcCCCHHHEEEEeCCHHHHHHHHHcCCEEEEECCc---cccccCCEEeCChHhCCHHHHHHH
Confidence 99999999999999999999999999999997432 334489999999999986544433
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.9e-27 Score=216.51 Aligned_cols=205 Identities=19% Similarity=0.236 Sum_probs=162.4
Q ss_pred CCceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHcc---CCChHHHHHHHHHHHH
Q 018088 117 DEAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLW---GKEESELDRLNSRLTQ 192 (361)
Q Consensus 117 ~~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~---~~~~~~~~~l~~~~~~ 192 (361)
+.+|+|+||+| ||+++...+..++.++++++|++.... ....+.|......+..++.. ...... +...+.+
T Consensus 28 ~~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 102 (250)
T 3l5k_A 28 QPVTHLIFDMDGLLLDTERLYSVVFQEICNRYDKKYSWD--VKSLVMGKKALEAAQIIIDVLQLPMSKEE---LVEESQT 102 (250)
T ss_dssp CCCSEEEEETBTTTBCHHHHHHHHHHHHHHHTTCCCCHH--HHHHHTTCCHHHHHHHHHHHHTCSSCHHH---HHHHHHH
T ss_pred cCCcEEEEcCCCCcCCCHHHHHHHHHHHHHHhCCCCCHH--HHHHhcCCCHHHHHHHHHHHhCCCCCHHH---HHHHHHH
Confidence 34899999999 999999999999999999999875433 44556677776666554432 233333 3333344
Q ss_pred HHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHh-CCCCcccceeEecC--CCCCCC--hHHHHHHH
Q 018088 193 LYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALER-MGLLKYFQAIVSEE--DGMESM--AHRFLSAA 267 (361)
Q Consensus 193 ~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~-lgl~~~Fd~iv~~e--~~~~~K--P~~~~~~~ 267 (361)
.+.+.. ....++||+.++|+.|+++|++++++||+....+...+.. +|+..+|+.+++++ ++...| |++|..++
T Consensus 103 ~~~~~~-~~~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f~~~~~~~~~~~~~~Kp~~~~~~~~~ 181 (250)
T 3l5k_A 103 KLKEVF-PTAALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACA 181 (250)
T ss_dssp HHHHHG-GGCCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTSSCEECTTCTTCCSCTTSTHHHHHHH
T ss_pred HHHHHh-ccCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhheeeEEecchhhccCCCCChHHHHHHH
Confidence 444433 4568899999999999999999999999998888877765 58899999999998 766555 67999999
Q ss_pred HHcCCCC--CcEEEEcCChHHHHHHHHcCCeEEEEeC-CCCcccccCcceEeCChhhhHHHHH
Q 018088 268 VKLDRKP--SKCVVFEDDPRAITAAHNCTMMAVGLIG-AHRAYDLVQADLAVANFNELSVINL 327 (361)
Q Consensus 268 ~klgi~p--~~~v~IGDs~~Di~aA~~aG~~~v~V~g-~~~~~~l~~ad~vi~sl~EL~~~ll 327 (361)
+++|++| ++|++|||+.+|+.||+++|+.+++|.. .........||++++++.||...++
T Consensus 182 ~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~ad~v~~sl~el~~~l~ 244 (250)
T 3l5k_A 182 KRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQDFQPELF 244 (250)
T ss_dssp HTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTSCGGGSTTSSEECSCGGGCCGGGG
T ss_pred HHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCchhhcccccEeecCHHHhhHHHh
Confidence 9999998 9999999999999999999999999944 3344444679999999999976544
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.1e-27 Score=214.59 Aligned_cols=205 Identities=13% Similarity=0.119 Sum_probs=172.6
Q ss_pred CceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHHHHHHHHH
Q 018088 118 EAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLYYD 196 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~ 196 (361)
.+|+|+||+| ||+++...+..++.++++++|.+.... ......+......+...+ +.+..........+.+.+.+
T Consensus 28 mik~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 103 (240)
T 3sd7_A 28 NYEIVLFDLDGTLTDPKEGITKSIQYSLNSFGIKEDLE--NLDQFIGPPLHDTFKEYY--KFEDKKAKEAVEKYREYFAD 103 (240)
T ss_dssp CCSEEEECSBTTTEECHHHHHHHHHHHHHHTTCCCCGG--GGGGGSSSCHHHHHHHTS--CCCHHHHHHHHHHHHHHHHH
T ss_pred hccEEEEecCCcCccCHHHHHHHHHHHHHHcCCCCCHH--HHHHHhCccHHHHHHHHh--CCCHHHHHHHHHHHHHHHHH
Confidence 3799999999 999999999999999999999883322 234455666666666543 45666667777777777766
Q ss_pred hcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcCCC-
Q 018088 197 NLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDRK- 273 (361)
Q Consensus 197 ~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi~- 273 (361)
.......++||+.++|+.|++.|++++++||+....+...++.+|+..+|+.++++++....| |++|..+++++|++
T Consensus 104 ~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~ 183 (240)
T 3sd7_A 104 KGIFENKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLCNVKD 183 (240)
T ss_dssp TGGGCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSCCCCHHHHHHHHHHHHTCCC
T ss_pred hcccccccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEEEEEeccccCCCCCCHHHHHHHHHHcCCCC
Confidence 555566789999999999999999999999999999999999999999999999999887665 57999999999999
Q ss_pred CCcEEEEcCChHHHHHHHHcCCeEEEEe-CCCCcccc--cCcceEeCChhhhHHHH
Q 018088 274 PSKCVVFEDDPRAITAAHNCTMMAVGLI-GAHRAYDL--VQADLAVANFNELSVIN 326 (361)
Q Consensus 274 p~~~v~IGDs~~Di~aA~~aG~~~v~V~-g~~~~~~l--~~ad~vi~sl~EL~~~l 326 (361)
|++|++|||+.+|+.||+++|+.+|+|. +......+ ..||+++.++.||..++
T Consensus 184 ~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~l 239 (240)
T 3sd7_A 184 KDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVENVESIKDIL 239 (240)
T ss_dssp GGGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEESSSTTHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECCHHHHHHHh
Confidence 9999999999999999999999999994 54555554 57999999999998875
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.95 E-value=8.2e-27 Score=208.57 Aligned_cols=207 Identities=19% Similarity=0.206 Sum_probs=170.1
Q ss_pred CceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHcc---CCChHHHHHHHHHHHHH
Q 018088 118 EAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLW---GKEESELDRLNSRLTQL 193 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~---~~~~~~~~~l~~~~~~~ 193 (361)
.+|+|+||+| ||+++...+..++.++++++|++..... .....+......+..++.. ..+......+...+.+.
T Consensus 5 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (233)
T 3s6j_A 5 PQTSFIFDLDGTLTDSVYQNVAAWKEALDAENIPLAMWR--IHRKIGMSGGLMLKSLSRETGMSITDEQAERLSEKHAQA 82 (233)
T ss_dssp CCCEEEECCBTTTEECHHHHHHHHHHHHHHTTCCCCHHH--HHHHTTSCHHHHHHHHHHC----CCHHHHHHHHHHHHHH
T ss_pred cCcEEEEcCCCccccChHHHHHHHHHHHHHcCCCCCHHH--HHHHcCCcHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence 4799999999 9999999999999999999998865442 3444677766666655432 34556666666666665
Q ss_pred HHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcC
Q 018088 194 YYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLD 271 (361)
Q Consensus 194 ~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klg 271 (361)
+.... ....++||+.++|+.|++.|++++++||+....+...++.+|+..+|+.++++++....| |++|..+++++|
T Consensus 83 ~~~~~-~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~l~ 161 (233)
T 3s6j_A 83 YERLQ-HQIIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKINIVTRDDVSYGKPDPDLFLAAAKKIG 161 (233)
T ss_dssp HHHTG-GGCEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSSCEECGGGSSCCTTSTHHHHHHHHHTT
T ss_pred HHHhh-ccCccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhheeeccccCCCCCCChHHHHHHHHHhC
Confidence 55532 445789999999999999999999999999999999999999999999999999876655 689999999999
Q ss_pred CCCCcEEEEcCChHHHHHHHHcCCeEEEEe-CCCCccccc--CcceEeCChhhhHHHHH
Q 018088 272 RKPSKCVVFEDDPRAITAAHNCTMMAVGLI-GAHRAYDLV--QADLAVANFNELSVINL 327 (361)
Q Consensus 272 i~p~~~v~IGDs~~Di~aA~~aG~~~v~V~-g~~~~~~l~--~ad~vi~sl~EL~~~ll 327 (361)
++|++|++|||+.+|+.||+++|+.+|+|. +......+. +||+++.++.||..++.
T Consensus 162 ~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~~~~el~~~l~ 220 (233)
T 3s6j_A 162 APIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYEDPLDLLNHLD 220 (233)
T ss_dssp CCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEESSHHHHHHTGG
T ss_pred CCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEECCHHHHHHHHH
Confidence 999999999999999999999999999994 444444443 49999999999988643
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=99.95 E-value=4.5e-27 Score=211.14 Aligned_cols=202 Identities=20% Similarity=0.194 Sum_probs=162.7
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHHhCCCC-CchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHHHHHHHHH
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEI-PQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLYYD 196 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~-~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~ 196 (361)
+++|+||+| ||+++...+..++.++++++|.+. .... .....|.+....+..++... ....+...+.+.+.+
T Consensus 3 ~k~viFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~g~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 76 (222)
T 2nyv_A 3 LRVILFDLDGTLIDSAKDIALALEKTLKELGLEEYYPDN--VTKYIGGGVRALLEKVLKDK----FREEYVEVFRKHYLE 76 (222)
T ss_dssp ECEEEECTBTTTEECHHHHHHHHHHHHHHTTCGGGCCSC--GGGGCSSCHHHHHHHHHGGG----CCTHHHHHHHHHHHH
T ss_pred CCEEEECCCCcCCCCHHHHHHHHHHHHHHcCCCCCCHHH--HHHHhCcCHHHHHHHHhChH----HHHHHHHHHHHHHHH
Confidence 789999999 999999999999999999999762 2221 13345667777777665411 122333444555555
Q ss_pred hcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCC--ChHHHHHHHHHcCCCC
Q 018088 197 NLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMES--MAHRFLSAAVKLDRKP 274 (361)
Q Consensus 197 ~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~--KP~~~~~~~~klgi~p 274 (361)
.......++||+.++|+.|+++|++++++||+....+...++.+|+..+|+.+++++++... ||+.|..+++++|++|
T Consensus 77 ~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~ 156 (222)
T 2nyv_A 77 NPVVYTKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEP 156 (222)
T ss_dssp CSCSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTSSCTTCCTTHHHHHHHHHHTCCG
T ss_pred hccccCccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHheEEEecCcCCCCCCChHHHHHHHHHhCCCc
Confidence 44455678999999999999999999999999999999999999999999999999887554 5789999999999999
Q ss_pred CcEEEEcCChHHHHHHHHcCCeEEEEe-CCCCcccccCcceEeCChhhhHHHHH
Q 018088 275 SKCVVFEDDPRAITAAHNCTMMAVGLI-GAHRAYDLVQADLAVANFNELSVINL 327 (361)
Q Consensus 275 ~~~v~IGDs~~Di~aA~~aG~~~v~V~-g~~~~~~l~~ad~vi~sl~EL~~~ll 327 (361)
++|++|||+.+|+.+|+++|+.+|+|. +...... ..++++++++.|+..++.
T Consensus 157 ~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~~~~~el~~~l~ 209 (222)
T 2nyv_A 157 EKALIVGDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTLSRPSDLVKLMD 209 (222)
T ss_dssp GGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEESSTTHHHHHHH
T ss_pred hhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEECCHHHHHHHHH
Confidence 999999999999999999999999984 3333333 679999999999987653
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.4e-26 Score=207.61 Aligned_cols=212 Identities=17% Similarity=0.200 Sum_probs=166.0
Q ss_pred cCCCCceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHH----HHHccCCChHHHHHHHH
Q 018088 114 MKPDEAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLH----KVLLWGKEESELDRLNS 188 (361)
Q Consensus 114 m~~~~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~----~~l~~~~~~~~~~~l~~ 188 (361)
|..+.+|+|+||+| ||+++...+..++.++++++|++.... ......+......+. ..++.......+.....
T Consensus 18 ~~~~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (247)
T 3dv9_A 18 YESIDLKAVLFDMDGVLFDSMPNHAESWHKIMKRFGFGLSRE--EAYMHEGRTGASTINIVSRRERGHDATEEEIKAIYQ 95 (247)
T ss_dssp CSCCCCCEEEEESBTTTBCCHHHHHHHHHHHHHHTTCCCCHH--HHHHTTTSCHHHHHHHHHHHHHSSCCCHHHHHHHHH
T ss_pred CCCCCCCEEEECCCCccCcCHHHHHHHHHHHHHHcCCCCCHH--HHHHHhCCChHHHHHHHHHHhcCCCCCHHHHHHHHH
Confidence 44456899999999 999999999999999999999876543 223344555444333 33445556666666655
Q ss_pred HHHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCccc--ceeEecCCCCCCC--hHHHH
Q 018088 189 RLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYF--QAIVSEEDGMESM--AHRFL 264 (361)
Q Consensus 189 ~~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~F--d~iv~~e~~~~~K--P~~~~ 264 (361)
.....+... ....++||+.++|+.|+++|++++++||+....+...++. |+..+| +.+++++++..+| |++|.
T Consensus 96 ~~~~~~~~~--~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~~~~~~~~~~~kp~~~~~~ 172 (247)
T 3dv9_A 96 AKTEEFNKC--PKAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANLMVTAFDVKYGKPNPEPYL 172 (247)
T ss_dssp HHHHHHTTS--CCCCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGGEECGGGCSSCTTSSHHHH
T ss_pred HHHHHHHhc--ccCCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCeEEecccCCCCCCCCHHHH
Confidence 554444332 3457899999999999999999999999999999999999 999999 9999999876655 57999
Q ss_pred HHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeC-CCCcccc--cCcceEeCChhhhHHHHHHhh
Q 018088 265 SAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIG-AHRAYDL--VQADLAVANFNELSVINLRRL 330 (361)
Q Consensus 265 ~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g-~~~~~~l--~~ad~vi~sl~EL~~~ll~~l 330 (361)
.+++++|++|++|++|||+.+|+.||+++|+.+|+|.. ......+ ..||++++++.||..++.+.+
T Consensus 173 ~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~~~~el~~~l~~~~ 241 (247)
T 3dv9_A 173 MALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFHSMPDFNKNWETLQ 241 (247)
T ss_dssp HHHHHHTCCGGGEEEEECSHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEESSHHHHHHHHHHHH
T ss_pred HHHHHcCCChhheEEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEECCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999944 3333333 379999999999998776654
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.95 E-value=3.8e-26 Score=208.07 Aligned_cols=208 Identities=17% Similarity=0.202 Sum_probs=168.2
Q ss_pred CCceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHc-------cCCChHHHHHHHH
Q 018088 117 DEAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLL-------WGKEESELDRLNS 188 (361)
Q Consensus 117 ~~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~-------~~~~~~~~~~l~~ 188 (361)
.++++|+||+| ||+|+...+..++.++++++|.+..... ....+.+.+....+...+. .............
T Consensus 21 ~~~k~iiFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (243)
T 2hsz_A 21 TQFKLIGFDLDGTLVNSLPDLALSINSALKDVNLPQASEN-LVMTWIGNGADVLSQRAVDWACKQAEKELTEDEFKYFKR 99 (243)
T ss_dssp SSCSEEEECSBTTTEECHHHHHHHHHHHHHHTTCCCCCHH-HHHHHCSSCHHHHHHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred ccCCEEEEcCCCcCCCCHHHHHHHHHHHHHHcCCCCCCHH-HHHHHhCchHHHHHHHHhhhhhccccccCCHHHHHHHHH
Confidence 34789999999 9999999999999999999998754333 3345666666665554432 2345555555556
Q ss_pred HHHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHH
Q 018088 189 RLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSA 266 (361)
Q Consensus 189 ~~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~ 266 (361)
.+.+.|.........++||+.++|+.|+++|++++++||+....+...++.+|+..+|+.++++++....| |+.|..+
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~ 179 (243)
T 2hsz_A 100 QFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYYL 179 (243)
T ss_dssp HHHHHHHHHTTSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSSSCTTSSHHHHHH
T ss_pred HHHHHHHHhccccCccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheEEEEEecccCCCCCcCHHHHHHH
Confidence 66666666555566789999999999999999999999999999999999999999999999998876555 5799999
Q ss_pred HHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEe-CCCCccc--ccCcceEeCChhhhHHH
Q 018088 267 AVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLI-GAHRAYD--LVQADLAVANFNELSVI 325 (361)
Q Consensus 267 ~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~-g~~~~~~--l~~ad~vi~sl~EL~~~ 325 (361)
++++|++|++|++|||+.+|+.||+++|+.+++|. +...... ...||+++.++.||..+
T Consensus 180 ~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~~~~el~~~ 241 (243)
T 2hsz_A 180 CGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKI 241 (243)
T ss_dssp HHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGGGGG
T ss_pred HHHhCcChhhEEEEcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEECCHHHHHHH
Confidence 99999999999999999999999999999999994 3332222 35699999999998654
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-26 Score=212.00 Aligned_cols=210 Identities=22% Similarity=0.262 Sum_probs=168.5
Q ss_pred hcCCCCceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHH---ccCCChHHHHHHHH
Q 018088 113 AMKPDEAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVL---LWGKEESELDRLNS 188 (361)
Q Consensus 113 ~m~~~~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l---~~~~~~~~~~~l~~ 188 (361)
.|..+.+|+|+||+| ||+++...+..++.++++++|.+.... .....+.+......+..+. +..........+..
T Consensus 22 sM~~~~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (259)
T 4eek_A 22 SMPDAPFDAVLFDLDGVLVESEGIIAQVWQSVLAERGLHLDLT-EIAMYFTGQRFDGVLAYLAQQHDFVPPPDFLDVLET 100 (259)
T ss_dssp ---CCCCSEEEEESBTTTEECHHHHHHHHHHHHHHTTCCCCHH-HHHHHTTTCCHHHHHHHHHHHHCCCCCTTHHHHHHH
T ss_pred HHHhcCCCEEEECCCCCcccCHHHHHHHHHHHHHHhCCCCCHH-HHHHHHhCCCHHHHHHHHHHHcCCCCCHHHHHHHHH
Confidence 455567899999999 999999999999999999999876543 3345556777776666543 43444444444444
Q ss_pred HHHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccce-eEecCCCC-CCC--hHHHH
Q 018088 189 RLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQA-IVSEEDGM-ESM--AHRFL 264 (361)
Q Consensus 189 ~~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~-iv~~e~~~-~~K--P~~~~ 264 (361)
.+.+.+ ....++||+.++|+.|++.|++++++||.....+...++.+|+..+|+. ++++++.. ..| |++|.
T Consensus 101 ~~~~~~-----~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~i~~~~~~~~~~Kp~~~~~~ 175 (259)
T 4eek_A 101 RFNAAM-----TGVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELAGEHIYDPSWVGGRGKPHPDLYT 175 (259)
T ss_dssp HHHHHH-----TTCEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHHCSCEECGGGGTTCCTTSSHHHH
T ss_pred HHHHHh-----ccCCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhccceEEeHhhcCcCCCCChHHHH
Confidence 443333 4557899999999999999999999999999999999999999999999 99998876 666 67999
Q ss_pred HHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEe-CCCC----cccc--cCcceEeCChhhhHHHHHH
Q 018088 265 SAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLI-GAHR----AYDL--VQADLAVANFNELSVINLR 328 (361)
Q Consensus 265 ~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~-g~~~----~~~l--~~ad~vi~sl~EL~~~ll~ 328 (361)
.+++++|++|++|++|||+.+|+.||+++|+.+|+|. |... ...+ ..||+++.++.||..++.+
T Consensus 176 ~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~ad~vi~~l~el~~~l~~ 246 (259)
T 4eek_A 176 FAAQQLGILPERCVVIEDSVTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVLTSHAELRAALAE 246 (259)
T ss_dssp HHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEECCTTSCCSSCHHHHHHHTCSEEECSHHHHHHHHHH
T ss_pred HHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEccCCCcccccHHHHHhcCcchhhCCHHHHHHHHHh
Confidence 9999999999999999999999999999999999994 4333 2223 4699999999999988665
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-26 Score=205.43 Aligned_cols=201 Identities=12% Similarity=0.205 Sum_probs=161.1
Q ss_pred CceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHHHHHHHHH
Q 018088 118 EAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLYYD 196 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~ 196 (361)
.+++|+||+| ||+++...+..++.++++++|.+... .......|......+..+ +............+...+..
T Consensus 3 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 77 (209)
T 2hdo_A 3 TYQALMFDIDGTLTNSQPAYTTVMREVLATYGKPFSP--AQAQKTFPMAAEQAMTEL---GIAASEFDHFQAQYEDVMAS 77 (209)
T ss_dssp CCSEEEECSBTTTEECHHHHHHHHHHHHHTTTCCCCH--HHHHHHTTSCHHHHHHHT---TCCGGGHHHHHHHHHHHHTT
T ss_pred cccEEEEcCCCCCcCCHHHHHHHHHHHHHHhCCCCCH--HHHHHHcCCcHHHHHHHc---CCCHHHHHHHHHHHHHHHhh
Confidence 3689999999 99999999999999999999985433 334556677777766653 22323333333333333222
Q ss_pred hcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcCCCC
Q 018088 197 NLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDRKP 274 (361)
Q Consensus 197 ~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi~p 274 (361)
......++||+.++|+.|+++ ++++++||+....+...++.+|+..+|+.++++++....| |+.|..+++++|++|
T Consensus 78 -~~~~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~ 155 (209)
T 2hdo_A 78 -HYDQIELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAP 155 (209)
T ss_dssp -CGGGCEECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCG
T ss_pred -hcccCCcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhccEEEecCcCCCCCCCcHHHHHHHHHcCCCc
Confidence 223457899999999999999 9999999999999999999999999999999999887777 689999999999999
Q ss_pred CcEEEEcCChHHHHHHHHcCCeEEEEe-CCCCcccccCcceEeCChhhhHHH
Q 018088 275 SKCVVFEDDPRAITAAHNCTMMAVGLI-GAHRAYDLVQADLAVANFNELSVI 325 (361)
Q Consensus 275 ~~~v~IGDs~~Di~aA~~aG~~~v~V~-g~~~~~~l~~ad~vi~sl~EL~~~ 325 (361)
++|++|||+.+|+.||+++|+.++++. +......+..||+++.++.||..+
T Consensus 156 ~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~a~~~~~~~~el~~~ 207 (209)
T 2hdo_A 156 QNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQKPLDILEL 207 (209)
T ss_dssp GGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEESSGGGGGGG
T ss_pred ccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhccCCEEeCCHHHHHHh
Confidence 999999999999999999999999984 544444444599999999998654
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=99.95 E-value=4.9e-26 Score=206.20 Aligned_cols=206 Identities=20% Similarity=0.261 Sum_probs=166.1
Q ss_pred CceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHH----HHHHccCCChHHHHHHHHHHHH
Q 018088 118 EAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVL----HKVLLWGKEESELDRLNSRLTQ 192 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l----~~~l~~~~~~~~~~~l~~~~~~ 192 (361)
.+|+|+||+| ||+++...+..+|.++++++|+...... .....+......+ ...++.......+..+...+..
T Consensus 23 ~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (243)
T 3qxg_A 23 KLKAVLFDMDGVLFNSMPYHSEAWHQVMKTHGLDLSREE--AYMHEGRTGASTINIVFQRELGKEATQEEIESIYHEKSI 100 (243)
T ss_dssp CCCEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCHHH--HHHTTTSCHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHH
T ss_pred cCCEEEEcCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHH--HHHHhCCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Confidence 4799999999 9999999999999999999998765432 2333455544333 3334555567777666666655
Q ss_pred HHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCccc--ceeEecCCCCCCC--hHHHHHHHH
Q 018088 193 LYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYF--QAIVSEEDGMESM--AHRFLSAAV 268 (361)
Q Consensus 193 ~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~F--d~iv~~e~~~~~K--P~~~~~~~~ 268 (361)
.+... ....++||+.++|+.|++.|++++++||+....+...++. |+..+| +.+++++++...| |++|..+++
T Consensus 101 ~~~~~--~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~i~~~~~~~~~kp~~~~~~~~~~ 177 (243)
T 3qxg_A 101 LFNSY--PEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKELMVTAFDVKYGKPNPEPYLMALK 177 (243)
T ss_dssp HHHTS--SCCCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGGEECTTTCSSCTTSSHHHHHHHH
T ss_pred HHHhc--ccCCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcceEEeHHhCCCCCCChHHHHHHHH
Confidence 54432 3457899999999999999999999999998999999999 999999 8899999876665 579999999
Q ss_pred HcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCC-CCcccc--cCcceEeCChhhhHHHHHH
Q 018088 269 KLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGA-HRAYDL--VQADLAVANFNELSVINLR 328 (361)
Q Consensus 269 klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~-~~~~~l--~~ad~vi~sl~EL~~~ll~ 328 (361)
++|++|++|++|||+.+|+.||+++|+.+|+|... .....+ ..||++++++.||..++.+
T Consensus 178 ~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~s~~el~~~l~~ 240 (243)
T 3qxg_A 178 KGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFPSMQTLCDSWDT 240 (243)
T ss_dssp HTTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCHHHHHHTTCSEEESCHHHHHHHHHH
T ss_pred HcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEeCCCCCHHHHHhcCCCEEECCHHHHHHHHHh
Confidence 99999999999999999999999999999999443 333333 3699999999999987654
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.94 E-value=9.1e-26 Score=207.25 Aligned_cols=209 Identities=18% Similarity=0.239 Sum_probs=167.5
Q ss_pred CceEEEEece-eccccHHHH-HHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHH-------------HHccCCChHH
Q 018088 118 EAYGLIFSWD-VVADTRALK-LNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHK-------------VLLWGKEESE 182 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~~-~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~-------------~l~~~~~~~~ 182 (361)
.+|+|+||+| ||+++...+ ..++.++++++|++.... ......+......+.. .++...+...
T Consensus 13 ~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (277)
T 3iru_A 13 PVEALILDWAGTTIDFGSLAPVYAFMELFKQEGIEVTQA--EAREPMGTEKSEHIRRMLGNSRIANAWLSIKGQASNEED 90 (277)
T ss_dssp CCCEEEEESBTTTBSTTCCHHHHHHHHHHHTTTCCCCHH--HHHTTTTSCHHHHHHHHTTSHHHHHHHHHHHSSCCCHHH
T ss_pred cCcEEEEcCCCCcccCCcccHHHHHHHHHHHhCCCCCHH--HHHHHhcCchHHHHHHhccchHHHHHHHHHhccCCCHHH
Confidence 4899999999 999987655 789999999999875432 3334445444433332 2344556666
Q ss_pred HHHHHHHHHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcc-cceeEecCCCCCCC--
Q 018088 183 LDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKY-FQAIVSEEDGMESM-- 259 (361)
Q Consensus 183 ~~~l~~~~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~-Fd~iv~~e~~~~~K-- 259 (361)
...+...+.+.+.+.......++||+.++|+.|++.|++++++||.....+...++.+|+..+ |+.+++++++..+|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~kp~ 170 (277)
T 3iru_A 91 IKRLYDLFAPIQTRIVAQRSQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPASTVFATDVVRGRPF 170 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCCSEEECGGGSSSCTTS
T ss_pred HHHHHHHHHHHHHHHhhccCccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCCceEecHHhcCCCCCC
Confidence 777777777776666656678899999999999999999999999999999999999999888 89999999876655
Q ss_pred hHHHHHHHHHcCCCC-CcEEEEcCChHHHHHHHHcCCeEEEEeCCCC------------------------cccc--cCc
Q 018088 260 AHRFLSAAVKLDRKP-SKCVVFEDDPRAITAAHNCTMMAVGLIGAHR------------------------AYDL--VQA 312 (361)
Q Consensus 260 P~~~~~~~~klgi~p-~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~------------------------~~~l--~~a 312 (361)
|++|..+++++|++| ++|++|||+.+|+.||+++|+.+|+|..... ...+ .+|
T Consensus 171 ~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a 250 (277)
T 3iru_A 171 PDMALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAGA 250 (277)
T ss_dssp SHHHHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhCCC
Confidence 679999999999999 9999999999999999999999999943321 2222 359
Q ss_pred ceEeCChhhhHHHHHH
Q 018088 313 DLAVANFNELSVINLR 328 (361)
Q Consensus 313 d~vi~sl~EL~~~ll~ 328 (361)
|++++++.||..++.+
T Consensus 251 d~v~~~~~el~~~l~~ 266 (277)
T 3iru_A 251 HYVIDSVADLETVITD 266 (277)
T ss_dssp SEEESSGGGTHHHHHH
T ss_pred CEEecCHHHHHHHHHH
Confidence 9999999999987654
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.94 E-value=6.5e-26 Score=203.10 Aligned_cols=207 Identities=17% Similarity=0.197 Sum_probs=161.2
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHH-hCCCCCchHHHHHHHhcCCHHHHHHHHHcc-CCC----hHHHHHHHHHHH
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFE-EGKEIPQEGDVLRQILNAGADHVLHKVLLW-GKE----ESELDRLNSRLT 191 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~-~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~-~~~----~~~~~~l~~~~~ 191 (361)
+++|+||+| ||+++...+..++.+++++ +|.+.. . ......|......+..++.. +.. ......+...+.
T Consensus 4 ~k~iifDlDGTL~d~~~~~~~~~~~~~~~~~g~~~~-~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (234)
T 2hcf_A 4 RTLVLFDIDGTLLKVESMNRRVLADALIEVYGTEGS-T--GSHDFSGKMDGAIIYEVLSNVGLERAEIADKFDKAKETYI 80 (234)
T ss_dssp CEEEEECCBTTTEEECTHHHHHHHHHHHHHHSCCCC-C-----CCTTCCHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHH
T ss_pred ceEEEEcCCCCcccCccchHHHHHHHHHHHhCCCCc-c--chhhhcCCChHHHHHHHHHHcCCCcccchhHHHHHHHHHH
Confidence 789999999 9999999999999999988 787664 1 22344566666655554433 222 223445555555
Q ss_pred HHHHHhcc-cCCCCCccHHHHHHHHhhC-CCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCC-CCC--hHHHHHH
Q 018088 192 QLYYDNLL-SVTEPMEGLQEWLDAVSSA-RIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGM-ESM--AHRFLSA 266 (361)
Q Consensus 192 ~~~~~~l~-~~~~~~pgv~elL~~L~~~-Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~-~~K--P~~~~~~ 266 (361)
..+.+.+. ....++||+.++|+.|+++ |++++++||+....+...++.+|+..+|+.++++++.. .+| |++|..+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~~k~~~~~~~~~ 160 (234)
T 2hcf_A 81 ALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDALDRNELPHIALERA 160 (234)
T ss_dssp HHHHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTCSSGGGHHHHHHHHH
T ss_pred HHHHHHhccCCCCcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhcCcceecCCCcCccchHHHHHHHH
Confidence 55554443 3456799999999999999 99999999999999999999999999999888877764 344 4689999
Q ss_pred HHHcC--CCCCcEEEEcCChHHHHHHHHcCCeEEEEeC-CCCcccc--cCcceEeCChhhhHHHHHH
Q 018088 267 AVKLD--RKPSKCVVFEDDPRAITAAHNCTMMAVGLIG-AHRAYDL--VQADLAVANFNELSVINLR 328 (361)
Q Consensus 267 ~~klg--i~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g-~~~~~~l--~~ad~vi~sl~EL~~~ll~ 328 (361)
++++| ++|++|++|||+.+|+.||+++|+.+++|.. ......+ ..||+++.++.||..++.+
T Consensus 161 ~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~~~a~~v~~~~~el~~~l~~ 227 (234)
T 2hcf_A 161 RRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAETDEVLAS 227 (234)
T ss_dssp HHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESCSCCHHHHHHH
T ss_pred HHHhCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEeCCHHhHHHHHHH
Confidence 99999 9999999999999999999999999999943 3333333 2499999999999987644
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.5e-25 Score=197.23 Aligned_cols=209 Identities=12% Similarity=0.141 Sum_probs=165.6
Q ss_pred CceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHHHHHHHHH
Q 018088 118 EAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLYYD 196 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~ 196 (361)
.+|+|+||+| ||+++...+..++.++++++|....... ......|......+..++... .......+...+...+.+
T Consensus 5 ~~k~v~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 82 (225)
T 3d6j_A 5 KYTVYLFDFDYTLADSSRGIVTCFRSVLERHGYTGITDD-MIKRTIGKTLEESFSILTGIT-DADQLESFRQEYSKEADI 82 (225)
T ss_dssp CCSEEEECCBTTTEECHHHHHHHHHHHHHHTTCCCCCHH-HHHTTTTSCHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCCCCCHHHHHHHHHHHHHHhCCCCCCHH-HHHHHhCCcHHHHHHHHcCCC-CHHHHHHHHHHHHHHHHH
Confidence 4789999999 9999999999999999999997654332 223445667777777665443 444555555556666665
Q ss_pred hcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcCCCC
Q 018088 197 NLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDRKP 274 (361)
Q Consensus 197 ~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi~p 274 (361)
.+.....+.||+.++++.|++.|++++++|+.....+...++.+|+..+|+.++++++....| |+.+..+++++|++|
T Consensus 83 ~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~ 162 (225)
T 3d6j_A 83 YMNANTILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWFDIIIGGEDVTHHKPDPEGLLLAIDRLKACP 162 (225)
T ss_dssp HTGGGCEECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCCSEEECGGGCSSCTTSTHHHHHHHHHTTCCG
T ss_pred hccccCccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhheeeeeehhhcCCCCCChHHHHHHHHHhCCCh
Confidence 555556779999999999999999999999999999999999999999999999988776555 589999999999999
Q ss_pred CcEEEEcCChHHHHHHHHcCCeEEEEeC-CCCccccc--CcceEeCChhhhHHHHHH
Q 018088 275 SKCVVFEDDPRAITAAHNCTMMAVGLIG-AHRAYDLV--QADLAVANFNELSVINLR 328 (361)
Q Consensus 275 ~~~v~IGDs~~Di~aA~~aG~~~v~V~g-~~~~~~l~--~ad~vi~sl~EL~~~ll~ 328 (361)
++|++|||+.||+.||+.+|+.++++.. ......+. .||+++.++.||..++.+
T Consensus 163 ~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l~~ 219 (225)
T 3d6j_A 163 EEVLYIGDSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRIISTLGQLISVPED 219 (225)
T ss_dssp GGEEEEESSHHHHHHHHHHTCEEEEETTSSCCTTGGGGSCCSEEESSGGGGC-----
T ss_pred HHeEEEcCCHHHHHHHHHCCCeEEEECCCCCChHHHhhcCCCEEECCHHHHHHhhhh
Confidence 9999999999999999999999999843 33333332 489999999999876543
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=99.94 E-value=9.9e-25 Score=195.61 Aligned_cols=206 Identities=14% Similarity=0.111 Sum_probs=155.0
Q ss_pred CceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHH-----HHHH----
Q 018088 118 EAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESEL-----DRLN---- 187 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~-----~~l~---- 187 (361)
.+|+|+||+| ||+++...+..++.++++++|++....... ...+. ....+..+.......... ..+.
T Consensus 6 ~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (238)
T 3ed5_A 6 RYRTLLFDVDDTILDFQAAEALALRLLFEDQNIPLTNDMKA--QYKTI-NQGLWRAFEEGKMTRDEVVNTRFSALLKEYG 82 (238)
T ss_dssp CCCEEEECCBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHH--HHHHH-HHHHHHHHHTTSSCHHHHHHHHHHHHHHHTT
T ss_pred cCCEEEEcCcCcCcCCchhHHHHHHHHHHHcCCCcchHHHH--HHHHH-HHHHHHHHHhccCCHHHHHHHHHHHHHHHcC
Confidence 4799999999 999999999999999999999876543211 11110 001111111111111110 0111
Q ss_pred -----HHHHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--h
Q 018088 188 -----SRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--A 260 (361)
Q Consensus 188 -----~~~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P 260 (361)
..+...|.+.......++||+.++|+.|++. ++++++||+....+...++.+|+..+|+.+++++++...| |
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~ 161 (238)
T 3ed5_A 83 YEADGALLEQKYRRFLEEGHQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFKDIFVSEDTGFQKPMK 161 (238)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGTTSCTTCH
T ss_pred CCCcHHHHHHHHHHHHHhcCCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhheEEEecccCCCCCCh
Confidence 2333444454445568899999999999999 9999999999999999999999999999999999876665 6
Q ss_pred HHHHHHHHHcC-CCCCcEEEEcCCh-HHHHHHHHcCCeEEEEeCCC-CcccccCcceEeCChhhhHHHHH
Q 018088 261 HRFLSAAVKLD-RKPSKCVVFEDDP-RAITAAHNCTMMAVGLIGAH-RAYDLVQADLAVANFNELSVINL 327 (361)
Q Consensus 261 ~~~~~~~~klg-i~p~~~v~IGDs~-~Di~aA~~aG~~~v~V~g~~-~~~~l~~ad~vi~sl~EL~~~ll 327 (361)
++|..+++++| ++|++|++|||+. +|+.||+++|+.+|++.... .......||++++++.||..++.
T Consensus 162 ~~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~~~~el~~~l~ 231 (238)
T 3ed5_A 162 EYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRKLEELYHILN 231 (238)
T ss_dssp HHHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEESSGGGHHHHHT
T ss_pred HHHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEECCHHHHHHHHH
Confidence 79999999999 9999999999998 99999999999999984433 33344579999999999988754
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.94 E-value=2.8e-25 Score=199.14 Aligned_cols=205 Identities=15% Similarity=0.115 Sum_probs=157.4
Q ss_pred CceEEEEece-eccccHHHHHHHHHHHHHHhCCCC---CchHHHHHHHhcC-------------CHHH----HHHHHHc-
Q 018088 118 EAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEI---PQEGDVLRQILNA-------------GADH----VLHKVLL- 175 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~---~~~~~~~~~~~g~-------------~~~~----~l~~~l~- 175 (361)
.+|+|+||+| ||+++...+..++.++++++|++. .... ....+.+. .... .+...+.
T Consensus 4 ~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (240)
T 3qnm_A 4 KYKNLFFDLDDTIWAFSRNARDTFEEVYQKYSFDRYFDSFDH-YYTLYQRRNTELWLEYGEGKVTKEELNRQRFFYPLQA 82 (240)
T ss_dssp CCSEEEECCBTTTBCHHHHHHHHHHHHHHHTTGGGTSSSHHH-HHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHH
T ss_pred CceEEEEcCCCCCcCchhhHHHHHHHHHHHcCCCcccCCHHH-HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence 4799999999 999999999999999999999765 3222 11222111 0111 1111111
Q ss_pred cCCChHHHHHHHHHHHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCC
Q 018088 176 WGKEESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDG 255 (361)
Q Consensus 176 ~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~ 255 (361)
.+.. .......+...+.........++||+.++|+.|+ .|++++++||+....+...++.+|+..+|+.++++++.
T Consensus 83 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~~~~~~~~ 158 (240)
T 3qnm_A 83 VGVE---DEALAERFSEDFFAIIPTKSGLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFKKIILSEDL 158 (240)
T ss_dssp TTCC---CHHHHHHHHHHHHHHGGGCCCBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGT
T ss_pred cCCC---cHHHHHHHHHHHHHHhhhcCCcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhceeEEEeccC
Confidence 1111 1223344445555555556788999999999999 99999999999999999999999999999999999987
Q ss_pred CCCC--hHHHHHHHHHcCCCCCcEEEEcCCh-HHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhhhHHHHH
Q 018088 256 MESM--AHRFLSAAVKLDRKPSKCVVFEDDP-RAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNELSVINL 327 (361)
Q Consensus 256 ~~~K--P~~~~~~~~klgi~p~~~v~IGDs~-~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~EL~~~ll 327 (361)
...| |++|..+++++|++|++|++|||+. +|+.||+++|+.++++...........||++++++.|+..+..
T Consensus 159 ~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi~sl~e~~~~~~ 233 (240)
T 3qnm_A 159 GVLKPRPEIFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHIHSLKELMNLLE 233 (240)
T ss_dssp TCCTTSHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEESSTHHHHHHTC
T ss_pred CCCCCCHHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEECCHHHHHHHHh
Confidence 6655 6799999999999999999999996 9999999999999999554443444579999999999988743
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.93 E-value=5e-25 Score=199.53 Aligned_cols=206 Identities=17% Similarity=0.123 Sum_probs=151.3
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHHhC---CCCCchHHHHHHHhcC-----CHHHHHHHHHcc--CCC-hHHHHHH
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFEEG---KEIPQEGDVLRQILNA-----GADHVLHKVLLW--GKE-ESELDRL 186 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G---~~~~~~~~~~~~~~g~-----~~~~~l~~~l~~--~~~-~~~~~~l 186 (361)
+++|+|||| ||+|+...+..++.+++++++ ..............+. .....+..++.. +.. .....
T Consensus 2 ~k~iiFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 79 (241)
T 2hoq_A 2 VKVIFFDLDDTLVDTSKLAEIARKNAIENMIRHGLPVDFETAYSELIELIKEYGSNFPYHFDYLLRRLDLPYNPKWIS-- 79 (241)
T ss_dssp CCEEEECSBTTTBCHHHHHHHHHHHHHHHHHHTTCCSCHHHHHHHHHHHHHHHCTTCTTHHHHHHHHTTCCCCHHHHH--
T ss_pred ccEEEEcCCCCCCCChhhHHHHHHHHHHHHHHccccccHHHHHHHHHHhhcccchhHHHHHHHHHHHhcCCccchHHH--
Confidence 689999999 999999999999999988874 3333222211111111 001112222211 111 12222
Q ss_pred HHHHHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHH
Q 018088 187 NSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFL 264 (361)
Q Consensus 187 ~~~~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~ 264 (361)
.+.+.|.+.......++||+.++|+.|+++|++++++||+....+...++.+|+..+|+.+++++++...| |++|.
T Consensus 80 --~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~ 157 (241)
T 2hoq_A 80 --AGVIAYHNTKFAYLREVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFFEHVIISDFEGVKKPHPKIFK 157 (241)
T ss_dssp --HHHHHHHHHHHHHCCBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTCHHHHH
T ss_pred --HHHHHHHHHHHhhCCCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhccEEEEeCCCCCCCCCHHHHH
Confidence 22333333333334689999999999999999999999999999999999999999999999998876655 58999
Q ss_pred HHHHHcCCCCCcEEEEcCCh-HHHHHHHHcCCeEEEEe-CCCCccccc---CcceEeCChhhhHHHHHH
Q 018088 265 SAAVKLDRKPSKCVVFEDDP-RAITAAHNCTMMAVGLI-GAHRAYDLV---QADLAVANFNELSVINLR 328 (361)
Q Consensus 265 ~~~~klgi~p~~~v~IGDs~-~Di~aA~~aG~~~v~V~-g~~~~~~l~---~ad~vi~sl~EL~~~ll~ 328 (361)
.+++++|++|++|++|||+. ||+.||+++|+.+++|. +........ .+|++++++.||..++.+
T Consensus 158 ~~~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~i~~~~el~~~l~~ 226 (241)
T 2hoq_A 158 KALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEIDNLESLLEVLAR 226 (241)
T ss_dssp HHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCHHHHTTGGGCSEEESSTTHHHHHHHH
T ss_pred HHHHHcCCCcccEEEECCCchHhHHHHHHCCCEEEEECCCCCCcccccccCCCCEEECCHHHHHHHHHH
Confidence 99999999999999999998 99999999999999993 333333333 799999999999887643
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.8e-25 Score=200.46 Aligned_cols=200 Identities=17% Similarity=0.182 Sum_probs=157.6
Q ss_pred CceEEEEece-eccccHHHHHHHH-HHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHHHHHHHH
Q 018088 118 EAYGLIFSWD-VVADTRALKLNAW-KQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLYY 195 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~~~~a~-~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~ 195 (361)
.+++|+||+| ||+++...+..++ .++++++|.+.... ....+......+...... ........+...+.
T Consensus 24 ~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~g~~~~~~----~~~~g~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 94 (231)
T 3kzx_A 24 QPTAVIFDWYNTLIDTSINIDRTTFYQVLDQMGYKNIDL----DSIPNSTIPKYLITLLGK-----RWKEATILYENSLE 94 (231)
T ss_dssp CCSEEEECTBTTTEETTSSCCHHHHHHHHHHTTCCCCCC----TTSCTTTHHHHHHHHHGG-----GHHHHHHHHHHHHH
T ss_pred CCCEEEECCCCCCcCCchhHHHHHHHHHHHHcCCCHHHH----HHHhCccHHHHHHHHhCc-----hHHHHHHHHHHHHh
Confidence 4799999999 9999998888888 99999998765221 223455555555555432 12223333444444
Q ss_pred -HhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcCC
Q 018088 196 -DNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDR 272 (361)
Q Consensus 196 -~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi 272 (361)
........+.||+.++|+.|+++|++++++||+....+...++.+|+..+|+.+++++++...| |+.|..+++++|+
T Consensus 95 ~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi 174 (231)
T 3kzx_A 95 KSQKSDNFMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDSIIGSGDTGTIKPSPEPVLAALTNINI 174 (231)
T ss_dssp HCCSCCCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEETSSSCCTTSSHHHHHHHHHHTC
T ss_pred hhcccccceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhheeeEEcccccCCCCCChHHHHHHHHHcCC
Confidence 3333456789999999999999999999999999999999999999999999999999887666 5799999999999
Q ss_pred CCC-cEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhhhHHHHHHhh
Q 018088 273 KPS-KCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNELSVINLRRL 330 (361)
Q Consensus 273 ~p~-~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~EL~~~ll~~l 330 (361)
+|+ +|++|||+.+|+.||+++|+.+|++..... ..+++++.++.||..++.+.+
T Consensus 175 ~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~~~~~----~~~~~~~~~~~el~~~l~~~l 229 (231)
T 3kzx_A 175 EPSKEVFFIGDSISDIQSAIEAGCLPIKYGSTNI----IKDILSFKNFYDIRNFICQLI 229 (231)
T ss_dssp CCSTTEEEEESSHHHHHHHHHTTCEEEEECC---------CCEEESSHHHHHHHHHHHH
T ss_pred CcccCEEEEcCCHHHHHHHHHCCCeEEEECCCCC----CCCceeeCCHHHHHHHHHHHh
Confidence 999 999999999999999999999999833222 468899999999998876543
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=99.93 E-value=4.5e-25 Score=195.64 Aligned_cols=204 Identities=25% Similarity=0.343 Sum_probs=160.1
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHHhCCC-CCchHHHHHHHhcCCHHHHHHHHHcc---CCChHHHHHHHHHHHHH
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFEEGKE-IPQEGDVLRQILNAGADHVLHKVLLW---GKEESELDRLNSRLTQL 193 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~-~~~~~~~~~~~~g~~~~~~l~~~l~~---~~~~~~~~~l~~~~~~~ 193 (361)
+|+|+||+| ||+++...+..++.++++++|.. ... .......|......+..++.. ..+......+...+.+.
T Consensus 2 ~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (221)
T 2wf7_A 2 FKAVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDR--QFNEQLKGVSREDSLQKILDLADKKVSAEEFKELAKRKNDN 79 (221)
T ss_dssp CCEEEECCBTTTBTHHHHHHHHHHHHHHHTTCCCCSH--HHHTTTTTCCHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred CcEEEECCCCcccCChHHHHHHHHHHHHHcCCCCCCH--HHHHHhCCCCHHHHHHHHHHHhCCCCChHHHHHHHHHHHHH
Confidence 689999999 99999999999999999999876 432 233445566655555544322 24555555555555555
Q ss_pred HHHhccc--CCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHH
Q 018088 194 YYDNLLS--VTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVK 269 (361)
Q Consensus 194 ~~~~l~~--~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~k 269 (361)
+...... ...++||+.++|+.|++.|++++++||. ......++.+|+..+|+.++++++....| |+.|..++++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~ 157 (221)
T 2wf7_A 80 YVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHA 157 (221)
T ss_dssp HHHHGGGCCGGGBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGCSEECCTTTSSSCTTSSHHHHHHHHH
T ss_pred HHHHHhhccCCCCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHcceEeccccCCCCCCChHHHHHHHHH
Confidence 5554432 3467999999999999999999999998 56778889999999999999998877666 5699999999
Q ss_pred cCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhhhHHHHHHh
Q 018088 270 LDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNELSVINLRR 329 (361)
Q Consensus 270 lgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~EL~~~ll~~ 329 (361)
+|++|++|++|||+.||+.||+++|+.++++.+ ...+..||+++.++.|+....+..
T Consensus 158 lgi~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~---~~~~~~a~~v~~~~~el~~~~~~~ 214 (221)
T 2wf7_A 158 VGVAPSESIGLEDSQAGIQAIKDSGALPIGVGR---PEDLGDDIVIVPDTSHYTLEFLKE 214 (221)
T ss_dssp TTCCGGGEEEEESSHHHHHHHHHHTCEEEEESC---HHHHCSSSEEESSGGGCCHHHHHH
T ss_pred cCCChhHeEEEeCCHHHHHHHHHCCCEEEEECC---HHHhccccchhcCHHhCCHHHHHH
Confidence 999999999999999999999999999999732 233447999999999986544433
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.93 E-value=6e-25 Score=191.76 Aligned_cols=196 Identities=12% Similarity=0.153 Sum_probs=156.4
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhc-CCHHHHHHHHH-ccCCChHHHHHHHHHHHHHHH
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILN-AGADHVLHKVL-LWGKEESELDRLNSRLTQLYY 195 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g-~~~~~~l~~~l-~~~~~~~~~~~l~~~~~~~~~ 195 (361)
+|+|+||+| ||+++...+..++.++++++|+.... .......+ .+....+..+. ..... ......+...+.
T Consensus 4 ~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 77 (207)
T 2go7_A 4 KTAFIWDLDGTLLDSYEAILSGIEETFAQFSIPYDK--EKVREFIFKYSVQDLLVRVAEDRNLD----VEVLNQVRAQSL 77 (207)
T ss_dssp CCEEEECTBTTTEECHHHHHHHHHHHHHHHTCCCCH--HHHHHHHHHSCHHHHHHHHHHHHTCC----HHHHHHHHHHHH
T ss_pred ccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCH--HHHHHHHccccHHHHHHHhhchhhcc----HHHHHHHHHHHH
Confidence 689999999 99999999999999999999985533 23344556 66666665543 11111 222233344444
Q ss_pred HhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcCCC
Q 018088 196 DNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDRK 273 (361)
Q Consensus 196 ~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi~ 273 (361)
+.+.....+.|++.++|+.|++.|++++++|++...... .++.+|+..+|+.++++++....| |+.+..+++++|++
T Consensus 78 ~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~i~ 156 (207)
T 2go7_A 78 AEKNAQVVLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLN 156 (207)
T ss_dssp TTCGGGCEECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCC
T ss_pred HhccccceeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhheeeEEecCcCCCCCCCcHHHHHHHHHhCCC
Confidence 444445577999999999999999999999999988888 999999999999999998877666 68999999999999
Q ss_pred CCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhhhHHHH
Q 018088 274 PSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNELSVIN 326 (361)
Q Consensus 274 p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~EL~~~l 326 (361)
|++|++|||+.||+.||+++|+.++++.... . .||+++.++.||..++
T Consensus 157 ~~~~~~iGD~~nDi~~~~~aG~~~i~~~~~~-~----~a~~v~~~~~el~~~l 204 (207)
T 2go7_A 157 SDNTYYIGDRTLDVEFAQNSGIQSINFLEST-Y----EGNHRIQALADISRIF 204 (207)
T ss_dssp GGGEEEEESSHHHHHHHHHHTCEEEESSCCS-C----TTEEECSSTTHHHHHT
T ss_pred cccEEEECCCHHHHHHHHHCCCeEEEEecCC-C----CCCEEeCCHHHHHHHH
Confidence 9999999999999999999999999884333 2 6999999999987754
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2.7e-24 Score=198.41 Aligned_cols=210 Identities=16% Similarity=0.149 Sum_probs=150.4
Q ss_pred cCCCCceEEEEece-eccccHHHHHHHHHHHHHH----hCCCCCchHH---HHHHHhc-------CCHHHH----HHHHH
Q 018088 114 MKPDEAYGLIFSWD-VVADTRALKLNAWKQLAFE----EGKEIPQEGD---VLRQILN-------AGADHV----LHKVL 174 (361)
Q Consensus 114 m~~~~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~----~G~~~~~~~~---~~~~~~g-------~~~~~~----l~~~l 174 (361)
|...++++||||+| ||+|+...+..+|.++++. +|++...... ....+.+ ...... +...+
T Consensus 13 ~~~~~~k~viFDlDGTLvds~~~~~~a~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (260)
T 2gfh_A 13 MGLSRVRAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKECFHPYSTCITDVRTSHWEEAI 92 (260)
T ss_dssp EECCCCCEEEECCBTTTBCHHHHHHHHHHHHHHHHHHTTCCCTHHHHHHHHHHHHHHTCCCC----CHHHHHHHHHHHHH
T ss_pred cccccceEEEEcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHHHH
Confidence 44556899999999 9999999999999988874 4554311110 0111111 111111 11111
Q ss_pred ----ccCCChHHHHHHHHHHHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeE
Q 018088 175 ----LWGKEESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIV 250 (361)
Q Consensus 175 ----~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv 250 (361)
.............. .+.........++||+.++|+.|++ +++++|+||++...+...++.+|+..+|+.++
T Consensus 93 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f~~i~ 167 (260)
T 2gfh_A 93 QETKGGADNRKLAEECYF----LWKSTRLQHMILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFDAIV 167 (260)
T ss_dssp HHHHCSSCCHHHHHHHHH----HHHHHHHHTCCCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCSEEE
T ss_pred HHhcCccchHHHHHHHHH----HHHHHHHhcCCCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhhheEE
Confidence 11112222222222 2222222345789999999999998 59999999999999999999999999999999
Q ss_pred ecCCCCCCC--hHHHHHHHHHcCCCCCcEEEEcCC-hHHHHHHHHcCC-eEEEEeCCCCcc--cccCcceEeCChhhhHH
Q 018088 251 SEEDGMESM--AHRFLSAAVKLDRKPSKCVVFEDD-PRAITAAHNCTM-MAVGLIGAHRAY--DLVQADLAVANFNELSV 324 (361)
Q Consensus 251 ~~e~~~~~K--P~~~~~~~~klgi~p~~~v~IGDs-~~Di~aA~~aG~-~~v~V~g~~~~~--~l~~ad~vi~sl~EL~~ 324 (361)
+++++..+| |++|..+++++|++|++|+||||+ .+|+.+|+++|+ .+|++.+..... ....+|+++.++.||..
T Consensus 168 ~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~ 247 (260)
T 2gfh_A 168 IGGEQKEEKPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLELPA 247 (260)
T ss_dssp EGGGSSSCTTCHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESSGGGHHH
T ss_pred ecCCCCCCCCCHHHHHHHHHHcCCChhhEEEECCCchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEECCHHHHHH
Confidence 999887666 579999999999999999999995 899999999999 799985443321 22469999999999988
Q ss_pred HHHH
Q 018088 325 INLR 328 (361)
Q Consensus 325 ~ll~ 328 (361)
++.+
T Consensus 248 ~l~~ 251 (260)
T 2gfh_A 248 LLQS 251 (260)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6543
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.93 E-value=6e-25 Score=194.94 Aligned_cols=208 Identities=19% Similarity=0.215 Sum_probs=158.9
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHcc-CCChHHHHHHHHHHHHHHHH
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLW-GKEESELDRLNSRLTQLYYD 196 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~-~~~~~~~~~l~~~~~~~~~~ 196 (361)
+|+|+||+| ||+++...+..++.++++++|.+..... ......|......+..+... .........+...+...+.+
T Consensus 9 ~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (226)
T 1te2_A 9 ILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRN-ELPDTLGLRIDMVVDLWYARQPWNGPSRQEVVERVIARAIS 87 (226)
T ss_dssp CCEEEECCBTTTBCCHHHHHHHHHHHHHHTTCCGGGGG-GSCCCTTCCHHHHHHHHHHHSCCSSSCHHHHHHHHHHHHHH
T ss_pred CCEEEECCCCCcCcCHHHHHHHHHHHHHHcCCCCChHH-HHHHHhCCCHHHHHHHHHHHcCCCccCHHHHHHHHHHHHHH
Confidence 799999999 9999999999999999999987654111 11223355555544443321 22211223333333333433
Q ss_pred hcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcCCCC
Q 018088 197 NLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDRKP 274 (361)
Q Consensus 197 ~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi~p 274 (361)
.+.....+.|++.++|+.|++.|++++++||.....+...++.+|+..+|+.++++++....| |+.+..+++++|++|
T Consensus 88 ~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~i~~ 167 (226)
T 1te2_A 88 LVEETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDP 167 (226)
T ss_dssp HHHHHCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSCG
T ss_pred HHhccCCcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCcEEEeccccCCCCCChHHHHHHHHHcCCCH
Confidence 333345789999999999999999999999999999999999999999999999998876666 789999999999999
Q ss_pred CcEEEEcCChHHHHHHHHcCCeEEEEeCCCC-c-ccccCcceEeCChhhhHHHHH
Q 018088 275 SKCVVFEDDPRAITAAHNCTMMAVGLIGAHR-A-YDLVQADLAVANFNELSVINL 327 (361)
Q Consensus 275 ~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~-~-~~l~~ad~vi~sl~EL~~~ll 327 (361)
++|++|||+.||+.||+++|+.++++..... . .....||+++.++.||....+
T Consensus 168 ~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~~~~~el~~~~~ 222 (226)
T 1te2_A 168 LTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELTAKDL 222 (226)
T ss_dssp GGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGCCHHHH
T ss_pred HHeEEEeCCHHHHHHHHHcCCEEEEEcCCCCcccccccccCeEECCHHHHhHHHh
Confidence 9999999999999999999999999844332 2 234579999999999876543
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1e-24 Score=200.10 Aligned_cols=209 Identities=16% Similarity=0.254 Sum_probs=160.7
Q ss_pred CCceEEEEece-eccccHH-HHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHH-------------HccCCChH
Q 018088 117 DEAYGLIFSWD-VVADTRA-LKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKV-------------LLWGKEES 181 (361)
Q Consensus 117 ~~~k~VIFDlD-TL~ds~~-~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~-------------l~~~~~~~ 181 (361)
+.+|+|+||+| ||+++.. .+..++.++++++|++.... ......|......+..+ +.......
T Consensus 4 m~ik~i~fDlDGTLld~~~~~~~~~~~~~l~~~G~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (267)
T 1swv_A 4 MKIEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITAE--EARKPMGLLKIDHVRALTEMPRIASEWNRVFRQLPTEA 81 (267)
T ss_dssp -CCCEEEECSBTTTBSTTCCTTHHHHHHHHHTTTCCCCHH--HHHTTTTSCHHHHHHHHHHSHHHHHHHHHHHSSCCCHH
T ss_pred CCceEEEEecCCCEEeCCCccHHHHHHHHHHHcCCCCCHH--HHHHHhccchHHHHHHhcccHHHHHHHHHHhCCCCCHH
Confidence 44799999999 9999887 67789999999999875422 22334455443333222 23334455
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCccc-ceeEecCCCCC--C
Q 018088 182 ELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYF-QAIVSEEDGME--S 258 (361)
Q Consensus 182 ~~~~l~~~~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~F-d~iv~~e~~~~--~ 258 (361)
....+...+...+.........++||+.++|+.|++.|++++++||.....+...++.+|+..+| +.+++++++.. +
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~kp 161 (267)
T 1swv_A 82 DIQEMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRP 161 (267)
T ss_dssp HHHHHHHHHHHHHHHHGGGGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSSCCTT
T ss_pred HHHHHHHHHHHHHHHhhccccccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccChHheecCCccCCCCC
Confidence 55555555555555555455678999999999999999999999999999999999999988886 99998887654 4
Q ss_pred ChHHHHHHHHHcCCCC-CcEEEEcCChHHHHHHHHcCCeEEEEeCCCC------------------------cccc--cC
Q 018088 259 MAHRFLSAAVKLDRKP-SKCVVFEDDPRAITAAHNCTMMAVGLIGAHR------------------------AYDL--VQ 311 (361)
Q Consensus 259 KP~~~~~~~~klgi~p-~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~------------------------~~~l--~~ 311 (361)
||+.+..+++++|++| ++|++|||+.||+.||++||+.+++|...+. ..++ ..
T Consensus 162 ~~~~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (267)
T 1swv_A 162 YPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENG 241 (267)
T ss_dssp SSHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCCCCccCccHHHHhhchhhhhhhhhhhHHHHHHhcC
Confidence 6789999999999999 9999999999999999999999999954332 1222 35
Q ss_pred cceEeCChhhhHHHHH
Q 018088 312 ADLAVANFNELSVINL 327 (361)
Q Consensus 312 ad~vi~sl~EL~~~ll 327 (361)
||++++++.||..++.
T Consensus 242 ad~v~~~~~el~~~l~ 257 (267)
T 1swv_A 242 AHFTIETMQELESVME 257 (267)
T ss_dssp CSEEESSGGGHHHHHH
T ss_pred CceeccCHHHHHHHHH
Confidence 9999999999988753
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.5e-24 Score=193.80 Aligned_cols=204 Identities=16% Similarity=0.108 Sum_probs=150.8
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHH-HHHHH--------h--cCCHH---HHHHHHHc-cCCChHH
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGD-VLRQI--------L--NAGAD---HVLHKVLL-WGKEESE 182 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~-~~~~~--------~--g~~~~---~~l~~~l~-~~~~~~~ 182 (361)
+|+|+||+| ||+++...+..++.++++++|........ ..... . |.... ..+..+.. .+.....
T Consensus 4 ~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 83 (235)
T 2om6_A 4 VKLVTFDVWNTLLDLNIMLDEFSHQLAKISGLHIKDVANAVIEVRNEIKKMRAQASEDPRKVLTGSQEALAGKLKVDVEL 83 (235)
T ss_dssp CCEEEECCBTTTBCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHHHHHTCCHHH
T ss_pred ceEEEEeCCCCCCCcchhHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHhhhhcCCCcchHHHHHHHHHHHhCCCHHH
Confidence 689999999 99999999999999999999876432110 01110 0 22222 23333221 1223222
Q ss_pred HHHHHHHHHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCC---HHHHHHHHHhCCCCcccceeEecCCCCCC-
Q 018088 183 LDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLD---RRKMVEALERMGLLKYFQAIVSEEDGMES- 258 (361)
Q Consensus 183 ~~~l~~~~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~---~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~- 258 (361)
..... ..+....... .++||+.++|+.|+++|++++++||.. ...+...++.+|+..+|+.++++++....
T Consensus 84 ~~~~~----~~~~~~~~~~-~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~k 158 (235)
T 2om6_A 84 VKRAT----ARAILNVDES-LVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDKTFFADEVLSYK 158 (235)
T ss_dssp HHHHH----HHHHHHCCGG-GBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSEEEEHHHHTCCT
T ss_pred HHHHH----HHHHHhcccc-CcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhhheeccccCCCC
Confidence 22222 2233332222 369999999999999999999999999 89999999999999999999998876554
Q ss_pred -ChHHHHHHHHHcCCCCCcEEEEcCCh-HHHHHHHHcCCeEEEEeCCCCccc-ccCcceEeCChhhhHHHHH
Q 018088 259 -MAHRFLSAAVKLDRKPSKCVVFEDDP-RAITAAHNCTMMAVGLIGAHRAYD-LVQADLAVANFNELSVINL 327 (361)
Q Consensus 259 -KP~~~~~~~~klgi~p~~~v~IGDs~-~Di~aA~~aG~~~v~V~g~~~~~~-l~~ad~vi~sl~EL~~~ll 327 (361)
+|++|..+++++|++|++|++|||+. ||+.||+++|+.++++...+...+ ...++++++++.||..++.
T Consensus 159 p~~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~ 230 (235)
T 2om6_A 159 PRKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIPSIANLKDVIE 230 (235)
T ss_dssp TCHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEESSGGGHHHHHH
T ss_pred CCHHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchHhhHHHHHHHHH
Confidence 56899999999999999999999999 999999999999999954443333 2458999999999987654
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.8e-24 Score=191.03 Aligned_cols=190 Identities=14% Similarity=0.115 Sum_probs=144.4
Q ss_pred CCceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHHHHHHHH
Q 018088 117 DEAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLYY 195 (361)
Q Consensus 117 ~~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~ 195 (361)
+.+|+|+||+| ||+++.. .|.+++++.|++.... ....+.+.... .......+...+.
T Consensus 4 ~~~k~iifDlDGTL~d~~~----~~~~~~~~~g~~~~~~--~~~~~~~~~~~---------------~~~~~~~~~~~~~ 62 (205)
T 3m9l_A 4 SEIKHWVFDMDGTLTIAVH----DFAAIREALSIPAEDD--ILTHLAALPAD---------------ESAAKHAWLLEHE 62 (205)
T ss_dssp GGCCEEEECTBTTTEEEEE----CHHHHHHHTTCCTTSC--HHHHHHHSCHH---------------HHHHHHHHHHHTH
T ss_pred ccCCEEEEeCCCcCcccHH----HHHHHHHHhCCCchHH--HHHHHhcCChH---------------HHHHHHHHHHHHH
Confidence 35799999999 9999864 4557788888876532 22222222111 1111222233333
Q ss_pred HhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCccc--ceeEecCCC-CCCChHHHHHHHHHcCC
Q 018088 196 DNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYF--QAIVSEEDG-MESMAHRFLSAAVKLDR 272 (361)
Q Consensus 196 ~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~F--d~iv~~e~~-~~~KP~~~~~~~~klgi 272 (361)
........++||+.++|+.|+++|++++++||+....+...++.+|+..+| +.+++.+.. .++||++|..+++++|+
T Consensus 63 ~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~~~~~~~~kp~~~~~~~~~~~~g~ 142 (205)
T 3m9l_A 63 RDLAQGSRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVLGRDEAPPKPHPGGLLKLAEAWDV 142 (205)
T ss_dssp HHHEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEECTTTSCCTTSSHHHHHHHHHTTC
T ss_pred HHHhhcCCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEEeCCCCCCCCCHHHHHHHHHHcCC
Confidence 444445578999999999999999999999999999999999999999999 788887662 23456899999999999
Q ss_pred CCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhhhHHHHHH
Q 018088 273 KPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNELSVINLR 328 (361)
Q Consensus 273 ~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~EL~~~ll~ 328 (361)
+|++|++|||+.+|+.||+++|+.+|++..... .....||++++++.||..++.+
T Consensus 143 ~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~-~~~~~ad~v~~~~~el~~~~~~ 197 (205)
T 3m9l_A 143 SPSRMVMVGDYRFDLDCGRAAGTRTVLVNLPDN-PWPELTDWHARDCAQLRDLLSA 197 (205)
T ss_dssp CGGGEEEEESSHHHHHHHHHHTCEEEECSSSSC-SCGGGCSEECSSHHHHHHHHHH
T ss_pred CHHHEEEECCCHHHHHHHHHcCCEEEEEeCCCC-cccccCCEEeCCHHHHHHHHHh
Confidence 999999999999999999999999999844332 2334699999999999887543
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=99.92 E-value=5.6e-24 Score=192.31 Aligned_cols=210 Identities=13% Similarity=0.093 Sum_probs=151.9
Q ss_pred hcCCCCceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHH----HHHHH
Q 018088 113 AMKPDEAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESE----LDRLN 187 (361)
Q Consensus 113 ~m~~~~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~----~~~l~ 187 (361)
.|..+.+|+|+||+| ||+++...+..++.++++++|.+...... ...+.+. ....+............ .....
T Consensus 9 ~m~~~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (254)
T 3umg_A 9 PSTGRNVRAVLFDTFGTVVDWRTGIATAVADYAARHQLEVDAVAF-ADRWRAR-YQPSMDAILSGAREFVTLDILHRENL 86 (254)
T ss_dssp TTTCSBCCEEEECCBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHH-HHHHHTT-HHHHHHHHHTTSSCCCCHHHHHHHHH
T ss_pred cCCCCCceEEEEeCCCceecCchHHHHHHHHHHHHhcCCCCHHHH-HHHHHHh-HHHHHHHHHhcCCCCCCHHHHHHHHH
Confidence 344456899999999 99999999999999999999987654432 2233332 22222222211111000 00000
Q ss_pred HHHH---------------HHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEec
Q 018088 188 SRLT---------------QLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSE 252 (361)
Q Consensus 188 ~~~~---------------~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~ 252 (361)
..+. ..+... .....++||+.++|+.|++. ++++++||+....+...++.+|+. |+.++++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~--f~~~~~~ 162 (254)
T 3umg_A 87 DFVLRESGIDPTNHDSGELDELARA-WHVLTPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIP--WDVIIGS 162 (254)
T ss_dssp HHHHHHTTCCGGGSCHHHHHHHHGG-GGSCCBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCC--CSCCCCH
T ss_pred HHHHHHhCCCcCcCCHHHHHHHHHH-HhhCcCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCC--eeEEEEc
Confidence 1110 111111 13457899999999999997 999999999999999999999985 8999998
Q ss_pred CCCCCC--ChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeC-----CCCccc---ccCcceEeCChhhh
Q 018088 253 EDGMES--MAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIG-----AHRAYD---LVQADLAVANFNEL 322 (361)
Q Consensus 253 e~~~~~--KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g-----~~~~~~---l~~ad~vi~sl~EL 322 (361)
++.... ||++|..+++++|++|++|++|||+.+|+.||+++|+.++++.. .....+ ...||++++++.||
T Consensus 163 ~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~~el 242 (254)
T 3umg_A 163 DINRKYKPDPQAYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISATDITDL 242 (254)
T ss_dssp HHHTCCTTSHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEESSHHHH
T ss_pred CcCCCCCCCHHHHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEECCHHHH
Confidence 876554 56899999999999999999999999999999999999999952 222333 35699999999999
Q ss_pred HHHHHH
Q 018088 323 SVINLR 328 (361)
Q Consensus 323 ~~~ll~ 328 (361)
..++..
T Consensus 243 ~~~l~~ 248 (254)
T 3umg_A 243 AAQLRA 248 (254)
T ss_dssp HHHHHH
T ss_pred HHHhcC
Confidence 987654
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.7e-24 Score=193.78 Aligned_cols=202 Identities=13% Similarity=0.113 Sum_probs=150.0
Q ss_pred CCCceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHh-----------cCCHHH----HHHHHH---cc
Q 018088 116 PDEAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQIL-----------NAGADH----VLHKVL---LW 176 (361)
Q Consensus 116 ~~~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~-----------g~~~~~----~l~~~l---~~ 176 (361)
.+.+|+|+||+| ||+++...+..++.++++++|++....... ..+. +..... .+..+. +.
T Consensus 3 ~~~~k~i~fD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (240)
T 3smv_A 3 LTDFKALTFDCYGTLIDWETGIVNALQPLAKRTGKTFTSDELL-EVFGRNESPQQTETPGALYQDILRAVYDRIAKEWGL 81 (240)
T ss_dssp GGGCSEEEECCBTTTBCHHHHHHHHTHHHHHHHTCCCCHHHHH-HHHHHHHGGGCCSSCCSCHHHHHHHHHHHHHHHTTC
T ss_pred CccceEEEEeCCCcCcCCchhHHHHHHHHHHHhCCCCCHHHHH-HHHHHHHHHHHhhCCCCChhHHHHHHHHHHHHHhCC
Confidence 345899999999 999999999999999999999886544322 2221 111111 122111 11
Q ss_pred CCChHHHHHHHHHHHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCC
Q 018088 177 GKEESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGM 256 (361)
Q Consensus 177 ~~~~~~~~~l~~~~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~ 256 (361)
..... ....+.... ....++||+.++|+.|++ |++++++||+....+...++. +..+|+.+++++++.
T Consensus 82 ~~~~~--------~~~~~~~~~-~~~~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~--l~~~fd~i~~~~~~~ 149 (240)
T 3smv_A 82 EPDAA--------EREEFGTSV-KNWPAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAK--LGVEFDHIITAQDVG 149 (240)
T ss_dssp CCCHH--------HHHHHHTGG-GGCCBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTT--TCSCCSEEEEHHHHT
T ss_pred CCCHH--------HHHHHHHHH-hcCCCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHh--cCCccCEEEEccccC
Confidence 11111 112222222 345789999999999999 799999999999999888887 557999999999887
Q ss_pred CCCh--HHHHHH---HHHcCCCCCcEEEEcCCh-HHHHHHHHcCCeEEEEeCC------C--C-cccccCcceEeCChhh
Q 018088 257 ESMA--HRFLSA---AVKLDRKPSKCVVFEDDP-RAITAAHNCTMMAVGLIGA------H--R-AYDLVQADLAVANFNE 321 (361)
Q Consensus 257 ~~KP--~~~~~~---~~klgi~p~~~v~IGDs~-~Di~aA~~aG~~~v~V~g~------~--~-~~~l~~ad~vi~sl~E 321 (361)
..|| ++|..+ ++++|++|++|++|||+. +|+.||+++|+.++++... + . ......||++++++.|
T Consensus 150 ~~KP~~~~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~~~~e 229 (240)
T 3smv_A 150 SYKPNPNNFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNSMGE 229 (240)
T ss_dssp SCTTSHHHHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEESSHHH
T ss_pred CCCCCHHHHHHHHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeCCHHH
Confidence 7764 688888 899999999999999996 9999999999999998543 1 1 1222579999999999
Q ss_pred hHHHHHHhh
Q 018088 322 LSVINLRRL 330 (361)
Q Consensus 322 L~~~ll~~l 330 (361)
|..++.+.+
T Consensus 230 l~~~l~~~l 238 (240)
T 3smv_A 230 MAEAHKQAL 238 (240)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 998876654
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.92 E-value=4.6e-24 Score=193.57 Aligned_cols=208 Identities=15% Similarity=0.124 Sum_probs=150.4
Q ss_pred cCCCCceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHH----HHHH
Q 018088 114 MKPDEAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELD----RLNS 188 (361)
Q Consensus 114 m~~~~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~----~l~~ 188 (361)
+.++++|+|+||+| ||+++...+..++.++++++|.+....... ..+.+... ..+.............. ....
T Consensus 17 ~~~m~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (254)
T 3umc_A 17 LYFQGMRAILFDVFGTLVDWRSSLIEQFQALERELGGTLPCVELT-DRWRQQYK-PAMDRVRNGQAPWQHLDQLHRQSLE 94 (254)
T ss_dssp CCSSSCCEEEECCBTTTEEHHHHHHHHHHHHHHHSSSCCCHHHHH-HHHHHHTH-HHHHHHHTTSSCCCCHHHHHHHHHH
T ss_pred ccccCCcEEEEeCCCccEecCccHHHHHHHHHHHhcCCCCHHHHH-HHHHHHHH-HHHHHHhcccCCcccHHHHHHHHHH
Confidence 34567899999999 999999999999999999999876544322 22222111 11111111111100010 1111
Q ss_pred HHH------------HHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCC
Q 018088 189 RLT------------QLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGM 256 (361)
Q Consensus 189 ~~~------------~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~ 256 (361)
.+. ..+. .......++||+.++|+.|++. ++++++||.....+...++.+|+. |+.+++++++.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~--f~~~~~~~~~~ 170 (254)
T 3umc_A 95 ALAGEFGLALDEALLQRIT-GFWHRLRPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLP--WDMLLCADLFG 170 (254)
T ss_dssp HHHHHTTCCCCHHHHHHHH-GGGGSCEECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCC--CSEECCHHHHT
T ss_pred HHHHHhCCCCCHHHHHHHH-HHHhcCCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCC--cceEEeecccc
Confidence 111 1111 1123456799999999999986 999999999999999999999985 99999998765
Q ss_pred C--CChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEe-----CCCCcccc---cCcceEeCChhhhHHHH
Q 018088 257 E--SMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLI-----GAHRAYDL---VQADLAVANFNELSVIN 326 (361)
Q Consensus 257 ~--~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~-----g~~~~~~l---~~ad~vi~sl~EL~~~l 326 (361)
. +||++|..+++++|++|++|++|||+.+|+.||+++|+.++++. |.....++ ..||++++++.||..++
T Consensus 171 ~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~~l~el~~~l 250 (254)
T 3umc_A 171 HYKPDPQVYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIASDLLDLHRQL 250 (254)
T ss_dssp CCTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEESSHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEECCHHHHHHHh
Confidence 4 45789999999999999999999999999999999999999995 33333333 46999999999998875
Q ss_pred H
Q 018088 327 L 327 (361)
Q Consensus 327 l 327 (361)
.
T Consensus 251 ~ 251 (254)
T 3umc_A 251 A 251 (254)
T ss_dssp H
T ss_pred c
Confidence 3
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-24 Score=200.35 Aligned_cols=207 Identities=15% Similarity=0.126 Sum_probs=152.5
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHH-----------------hcCCHHHHH----HHHHcc
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQI-----------------LNAGADHVL----HKVLLW 176 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~-----------------~g~~~~~~l----~~~l~~ 176 (361)
+|+|+||+| ||+++...+..+|.++++++|+....... ...+ .|......+ ...+..
T Consensus 1 ik~iiFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 79 (263)
T 3k1z_A 1 MRLLTWDVKDTLLRLRHPLGEAYATKARAHGLEVEPSAL-EQGFRQAYRAQSHSFPNYGLSHGLTSRQWWLDVVLQTFHL 79 (263)
T ss_dssp CCEEEECCBTTTEEESSCHHHHHHHHHHHTTCCCCHHHH-HHHHHHHHHHHHHHSTGGGGGGTCCHHHHHHHHHHHHHHH
T ss_pred CcEEEEcCCCceeCCCCCHHHHHHHHHHHhCCCCCHHHH-HHHHHHHHHHhhhhccccccccCCCHHHHHHHHHHHHHHH
Confidence 479999999 99998888888999999999987654321 1111 122222222 222211
Q ss_pred -CC-ChHHHHHHHHHHHHHHHHhcc-cCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecC
Q 018088 177 -GK-EESELDRLNSRLTQLYYDNLL-SVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEE 253 (361)
Q Consensus 177 -~~-~~~~~~~l~~~~~~~~~~~l~-~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e 253 (361)
+. ....+. ......+..... ....++||+.++|+.|+++|++++|+||+.. .+...++.+|+..+|+.+++++
T Consensus 80 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~-~~~~~l~~~gl~~~f~~~~~~~ 155 (263)
T 3k1z_A 80 AGVQDAQAVA---PIAEQLYKDFSHPCTWQVLDGAEDTLRECRTRGLRLAVISNFDR-RLEGILGGLGLREHFDFVLTSE 155 (263)
T ss_dssp TTCCCHHHHH---HHHHHHHHHTTSGGGEEECTTHHHHHHHHHHTTCEEEEEESCCT-THHHHHHHTTCGGGCSCEEEHH
T ss_pred cCCCCHHHHH---HHHHHHHHHhcCcccceECcCHHHHHHHHHhCCCcEEEEeCCcH-HHHHHHHhCCcHHhhhEEEeec
Confidence 11 222222 222333333322 2246899999999999999999999999876 4688999999999999999998
Q ss_pred CCCCCC--hHHHHHHHHHcCCCCCcEEEEcCCh-HHHHHHHHcCCeEEEEeCCCCcc----cccCcceEeCChhhhHHHH
Q 018088 254 DGMESM--AHRFLSAAVKLDRKPSKCVVFEDDP-RAITAAHNCTMMAVGLIGAHRAY----DLVQADLAVANFNELSVIN 326 (361)
Q Consensus 254 ~~~~~K--P~~~~~~~~klgi~p~~~v~IGDs~-~Di~aA~~aG~~~v~V~g~~~~~----~l~~ad~vi~sl~EL~~~l 326 (361)
++...| |++|..+++++|++|++|++|||+. +|+.||+++|+.+|++....... ....||+++.++.||..++
T Consensus 156 ~~~~~Kp~~~~~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~~l~el~~~l 235 (263)
T 3k1z_A 156 AAGWPKPDPRIFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPSLAHLLPAL 235 (263)
T ss_dssp HHSSCTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEESSGGGHHHHH
T ss_pred ccCCCCCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeCCHHHHHHHH
Confidence 876555 6799999999999999999999997 99999999999999995443222 1236999999999999886
Q ss_pred HHhh
Q 018088 327 LRRL 330 (361)
Q Consensus 327 l~~l 330 (361)
.+..
T Consensus 236 ~~~~ 239 (263)
T 3k1z_A 236 DCLE 239 (263)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6543
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.4e-23 Score=191.02 Aligned_cols=203 Identities=14% Similarity=0.054 Sum_probs=151.0
Q ss_pred CceEEEEece-eccccHHHHHHHHHHHHH---HhCCCC---CchH---HHHH--HHhcCCHHHHHHHHH-------ccCC
Q 018088 118 EAYGLIFSWD-VVADTRALKLNAWKQLAF---EEGKEI---PQEG---DVLR--QILNAGADHVLHKVL-------LWGK 178 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~~~~a~~~~l~---~~G~~~---~~~~---~~~~--~~~g~~~~~~l~~~l-------~~~~ 178 (361)
.+|+|+||+| ||+|+...+..++.++++ ++|+.. .... .... ...|.+.......+. ....
T Consensus 12 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 91 (251)
T 2pke_A 12 AIQLVGFDGDDTLWKSEDYYRTAEADFEAILSGYLDLGDSRMQQHLLAVERRNLKIFGYGAKGMTLSMIETAIELTEARI 91 (251)
T ss_dssp SCCEEEECCBTTTBCCHHHHHHHHHHHHHHHTTTCCC-----CTTHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHTTTCC
T ss_pred ceeEEEEeCCCCCccCcHhHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHhhhhhhccCcchHHHHHHHHHHHHhcCCCC
Confidence 4789999999 999999999999988874 567664 1111 1111 245666665544432 1112
Q ss_pred ChHHHHHHHHHHHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCC
Q 018088 179 EESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMES 258 (361)
Q Consensus 179 ~~~~~~~l~~~~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~ 258 (361)
... ....+.+.+.+.......++||+.++|+.|+ .|++++++||+....+...++.+|+..+|+.+++. .++
T Consensus 92 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~i~~~---~kp 163 (251)
T 2pke_A 92 EAR----DIQRIVEIGRATLQHPVEVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLFPRIEVV---SEK 163 (251)
T ss_dssp CHH----HHHHHHHHHHHHHTCCCCBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTCCCEEEE---SCC
T ss_pred ChH----HHHHHHHHHHHHHhccCCcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhCceeeee---CCC
Confidence 222 2223334444444455678999999999999 99999999999999999999999999999998875 356
Q ss_pred ChHHHHHHHHHcCCCCCcEEEEcCCh-HHHHHHHHcCCeEEEEeCCCC-cc---c---ccCcce-EeCChhhhHHHHHH
Q 018088 259 MAHRFLSAAVKLDRKPSKCVVFEDDP-RAITAAHNCTMMAVGLIGAHR-AY---D---LVQADL-AVANFNELSVINLR 328 (361)
Q Consensus 259 KP~~~~~~~~klgi~p~~~v~IGDs~-~Di~aA~~aG~~~v~V~g~~~-~~---~---l~~ad~-vi~sl~EL~~~ll~ 328 (361)
+|+.|..+++++|++|++|++|||+. ||+.||+++|+.+|+|..... .. + ...+|+ +++++.||..++.+
T Consensus 164 ~~~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~~l~~ 242 (251)
T 2pke_A 164 DPQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREVPDPSGWPAAVRA 242 (251)
T ss_dssp SHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEECSSGGGHHHHHHH
T ss_pred CHHHHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeeeCCHHHHHHHHHH
Confidence 78999999999999999999999999 999999999999999843221 11 1 246898 99999999886543
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.8e-23 Score=193.35 Aligned_cols=122 Identities=10% Similarity=0.041 Sum_probs=105.5
Q ss_pred cCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhC---CCCcccceeEecCCCCCCCh--HHHHHHHHHcCCCC
Q 018088 200 SVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERM---GLLKYFQAIVSEEDGMESMA--HRFLSAAVKLDRKP 274 (361)
Q Consensus 200 ~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~l---gl~~~Fd~iv~~e~~~~~KP--~~~~~~~~klgi~p 274 (361)
....++||+.++|+.|+++|++++|+||+....+...++.+ |+..+|+.++++ ++. +|| ++|..+++++|++|
T Consensus 127 ~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~fd~i~~~-~~~-~KP~p~~~~~~~~~lg~~p 204 (261)
T 1yns_A 127 MKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDT-KIG-HKVESESYRKIADSIGCST 204 (261)
T ss_dssp CCBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECG-GGC-CTTCHHHHHHHHHHHTSCG
T ss_pred cccccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhccEEEec-CCC-CCCCHHHHHHHHHHhCcCc
Confidence 34578999999999999999999999999999999999854 699999999998 666 775 79999999999999
Q ss_pred CcEEEEcCChHHHHHHHHcCCeEEEEeC-CCCccc-c-cCcceEeCChhhhH
Q 018088 275 SKCVVFEDDPRAITAAHNCTMMAVGLIG-AHRAYD-L-VQADLAVANFNELS 323 (361)
Q Consensus 275 ~~~v~IGDs~~Di~aA~~aG~~~v~V~g-~~~~~~-l-~~ad~vi~sl~EL~ 323 (361)
++|+||||+.+|+.+|+++|+.+|+|.. ...... . ..++++++++.||.
T Consensus 205 ~~~l~VgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~i~~l~el~ 256 (261)
T 1yns_A 205 NNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITSFSELY 256 (261)
T ss_dssp GGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESSGGGCB
T ss_pred ccEEEEcCCHHHHHHHHHCCCEEEEEeCCCCCcccccccCCCEEECCHHHhC
Confidence 9999999999999999999999999943 332222 1 35899999999873
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.1e-23 Score=195.38 Aligned_cols=199 Identities=16% Similarity=0.164 Sum_probs=155.9
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHHHHHHHHHh
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLYYDN 197 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~~ 197 (361)
+++|+||+| ||+++...+..+|.++++++|. .. .........|......+..+............ +...+.+.
T Consensus 35 ik~iifDlDGTLlds~~~~~~~~~~~~~~~g~-~~-~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 108 (275)
T 2qlt_A 35 INAALFDVDGTIIISQPAIAAFWRDFGKDKPY-FD-AEHVIHISHGWRTYDAIAKFAPDFADEEYVNK----LEGEIPEK 108 (275)
T ss_dssp ESEEEECCBTTTEECHHHHHHHHHHHHTTCTT-CC-HHHHHHHCTTCCHHHHHHHHCGGGCCHHHHHH----HHHTHHHH
T ss_pred CCEEEECCCCCCCCCHHHHHHHHHHHHHHcCC-CC-HHHHHHHhcCCCHHHHHHHHhccCCcHHHHHH----HHHHHHHH
Confidence 789999999 9999999999999999988883 22 22233445577777776665543333333332 22333333
Q ss_pred cccCCCCCccHHHHHHHHhhC-CCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCC--ChHHHHHHHHHcCC--
Q 018088 198 LLSVTEPMEGLQEWLDAVSSA-RIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMES--MAHRFLSAAVKLDR-- 272 (361)
Q Consensus 198 l~~~~~~~pgv~elL~~L~~~-Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~--KP~~~~~~~~klgi-- 272 (361)
......++||+.++|+.|++. |++++++||+....+...++.+|+. +|+.++++++.... ||++|..+++++|+
T Consensus 109 ~~~~~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~-~f~~i~~~~~~~~~kp~~~~~~~~~~~lgi~~ 187 (275)
T 2qlt_A 109 YGEHSIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIK-RPEYFITANDVKQGKPHPEPYLKGRNGLGFPI 187 (275)
T ss_dssp HCTTCEECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCC-CCSSEECGGGCSSCTTSSHHHHHHHHHTTCCC
T ss_pred HhcCCCcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCC-ccCEEEEcccCCCCCCChHHHHHHHHHcCCCc
Confidence 334557799999999999999 9999999999999999999999986 58999998876554 56899999999999
Q ss_pred -----CCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccc--cCcceEeCChhhhHH
Q 018088 273 -----KPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDL--VQADLAVANFNELSV 324 (361)
Q Consensus 273 -----~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l--~~ad~vi~sl~EL~~ 324 (361)
+|++|++|||+.||++||++||+.+++|...+...+. ..||+++.++.||..
T Consensus 188 ~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~~~~el~~ 246 (275)
T 2qlt_A 188 NEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKNHESIRV 246 (275)
T ss_dssp CSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEESSGGGEEE
T ss_pred cccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHcCh
Confidence 9999999999999999999999999999554444333 258999999999763
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.91 E-value=2.3e-23 Score=185.83 Aligned_cols=202 Identities=23% Similarity=0.303 Sum_probs=155.4
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHc---cCCChHHHHHHHHHHHHHH
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLL---WGKEESELDRLNSRLTQLY 194 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~---~~~~~~~~~~l~~~~~~~~ 194 (361)
+|+|+||+| ||+++...+..++.++++++|.+.... .......+......+..+.. ............. .+
T Consensus 4 ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 78 (229)
T 2fdr_A 4 FDLIIFDCDGVLVDSEIIAAQVESRLLTEAGYPISVE-EMGERFAGMTWKNILLQVESEASIPLSASLLDKSEK----LL 78 (229)
T ss_dssp CSEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCHH-HHHHHHTTCCHHHHHHHHHHHHCCCCCTHHHHHHHH----HH
T ss_pred ccEEEEcCCCCcCccHHHHHHHHHHHHHHhCCCCCHH-HHHHHHhCCCHHHHHHHHHHHcCCCCCHHHHHHHHH----HH
Confidence 689999999 999999999999999999999876532 33455566666666555432 2223333333322 22
Q ss_pred HHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCccc-ceeEecCCCC----CCChHHHHHHHHH
Q 018088 195 YDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYF-QAIVSEEDGM----ESMAHRFLSAAVK 269 (361)
Q Consensus 195 ~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~F-d~iv~~e~~~----~~KP~~~~~~~~k 269 (361)
.+.......++||+.++|+.|+. +++++||+....+...++.+|+..+| +.++++++.. ++||+.|..++++
T Consensus 79 ~~~~~~~~~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~ 155 (229)
T 2fdr_A 79 DMRLERDVKIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQ 155 (229)
T ss_dssp HHHHHHHCCBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHH
T ss_pred HHHhhcCCccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHhccceEEeccccccCCCCcCHHHHHHHHHH
Confidence 22222334779999999999874 89999999999999999999999999 9999988754 4567899999999
Q ss_pred cCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCc-----cccc--CcceEeCChhhhHHHHHH
Q 018088 270 LDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRA-----YDLV--QADLAVANFNELSVINLR 328 (361)
Q Consensus 270 lgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~-----~~l~--~ad~vi~sl~EL~~~ll~ 328 (361)
+|++|++|++|||+.||+.||+++|+.+|++...... ..+. +||+++.++.|+..++.+
T Consensus 156 l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l~~ 221 (229)
T 2fdr_A 156 FGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAVIAA 221 (229)
T ss_dssp HTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHHHHHHH
T ss_pred cCCChhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceeecCHHHHHHHHHH
Confidence 9999999999999999999999999999998544331 1222 499999999999887644
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.6e-23 Score=185.07 Aligned_cols=200 Identities=17% Similarity=0.110 Sum_probs=147.1
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHH----------HHHhcCCHHHH----HHH---HHccCCCh
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVL----------RQILNAGADHV----LHK---VLLWGKEE 180 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~----------~~~~g~~~~~~----l~~---~l~~~~~~ 180 (361)
+|+|+||+| ||+++...+..++.++++.+...-... ... ..+.+.+.... ... ........
T Consensus 8 ik~i~fDlDGTL~~~~~~~~~~~~~~~~~l~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (234)
T 3ddh_A 8 IKVIAFDADDTLWSNEPFFQEVEKQYTDLLKPYGTSK-EISAALFQTEMNNLQILGYGAKAFTISMVETALQISNGKIAA 86 (234)
T ss_dssp CCEEEECCBTTTBCCHHHHHHHHHHHHHHTGGGSCHH-HHHHHHHHHHHHTHHHHCSSHHHHHHHHHHHHHHHTTTCCCH
T ss_pred ccEEEEeCCCCCccCcchHHHHHHHHHHHHHhcCCHH-HHHHHHHHHHhhhhhhhcCCcchhHHHHHHHHHHHhcCCCCH
Confidence 799999999 999999888888776655543211111 111 12334443332 221 12223344
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCCccHHHHHHHHhhCC-CcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC
Q 018088 181 SELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSAR-IPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM 259 (361)
Q Consensus 181 ~~~~~l~~~~~~~~~~~l~~~~~~~pgv~elL~~L~~~G-i~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K 259 (361)
.....+ .+.+.+.......++||+.++|+.|+++| ++++++||+....+...++.+|+.++|+.+++.. ++|
T Consensus 87 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~~~---kpk 159 (234)
T 3ddh_A 87 DIIRQI----VDLGKSLLKMPIELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFDHIEVMS---DKT 159 (234)
T ss_dssp HHHHHH----HHHHHHHTTCCCCBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCSEEEEES---CCS
T ss_pred HHHHHH----HHHHHHHhhccCCcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhheeeecC---CCC
Confidence 444433 33444444456688999999999999999 9999999999999999999999999999998763 578
Q ss_pred hHHHHHHHHHcCCCCCcEEEEcCCh-HHHHHHHHcCCeEEEEeCC-----CCcccccC-cceEeCChhhhHHHH
Q 018088 260 AHRFLSAAVKLDRKPSKCVVFEDDP-RAITAAHNCTMMAVGLIGA-----HRAYDLVQ-ADLAVANFNELSVIN 326 (361)
Q Consensus 260 P~~~~~~~~klgi~p~~~v~IGDs~-~Di~aA~~aG~~~v~V~g~-----~~~~~l~~-ad~vi~sl~EL~~~l 326 (361)
|++|..+++++|++|++|++|||+. +|+.||+++|+.+++|... ........ +|++++++.||..++
T Consensus 160 ~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~~l~el~~~l 233 (234)
T 3ddh_A 160 EKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVKRLDDLLSLL 233 (234)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECSSGGGHHHHC
T ss_pred HHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceecccHHHHHHhc
Confidence 9999999999999999999999997 9999999999999998322 12222333 499999999998753
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.8e-23 Score=192.69 Aligned_cols=203 Identities=11% Similarity=0.090 Sum_probs=142.6
Q ss_pred CceEEEEece-eccccHHHHHHHHHHHHHHh-----CCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHHHH
Q 018088 118 EAYGLIFSWD-VVADTRALKLNAWKQLAFEE-----GKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLT 191 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~-----G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~ 191 (361)
++|+|+||+| ||+++...+..++.+.+.++ |+...........................+.+...+ .
T Consensus 56 ~~k~i~FDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-------~ 128 (282)
T 3nuq_A 56 NLKVFFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEYGLAIRGLVMFHKVNALEY-------N 128 (282)
T ss_dssp CCCEEEECCTTTTSCCCHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHTHHHHHHHHHTTSSCHHHH-------H
T ss_pred CCCEEEEecCCCcccCCccHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHH-------H
Confidence 3799999999 99999877777777666653 443322111111110000011111111223333222 1
Q ss_pred HHHHHhc--ccCCCCCccHHHHHHHHhhCCC--cEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCC------CCChH
Q 018088 192 QLYYDNL--LSVTEPMEGLQEWLDAVSSARI--PCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGM------ESMAH 261 (361)
Q Consensus 192 ~~~~~~l--~~~~~~~pgv~elL~~L~~~Gi--~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~------~~KP~ 261 (361)
..+.... .....++||+.++|+.|+++|+ +++++||+....+...++.+|+..+|+.++++++.. ++||+
T Consensus 129 ~~~~~~~~~~~~~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~v~~~~~~~~~~~~~Kp~~~ 208 (282)
T 3nuq_A 129 RLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGLTYCDYSRTDTLVCKPHVK 208 (282)
T ss_dssp HHHTTTSCGGGTCCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSEEECCCCSSCSSCCCTTSHH
T ss_pred HHHhhhhhhhhccCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccceEEEeccCCCcccCCCcCHH
Confidence 2222211 2346789999999999999999 999999999999999999999999999999887643 45678
Q ss_pred HHHHHHHHcCCCC-CcEEEEcCChHHHHHHHHcCC-eEEEEeCCCCccc---ccCcceEeCChhhhHHHHH
Q 018088 262 RFLSAAVKLDRKP-SKCVVFEDDPRAITAAHNCTM-MAVGLIGAHRAYD---LVQADLAVANFNELSVINL 327 (361)
Q Consensus 262 ~~~~~~~klgi~p-~~~v~IGDs~~Di~aA~~aG~-~~v~V~g~~~~~~---l~~ad~vi~sl~EL~~~ll 327 (361)
+|..+++++|++| ++|++|||+.+|+.||+++|+ .++++.+...... ...+|++++++.||..++.
T Consensus 209 ~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~sl~el~~~l~ 279 (282)
T 3nuq_A 209 AFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILELPHVVS 279 (282)
T ss_dssp HHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEESSGGGGGGTSG
T ss_pred HHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeCCHHHHHHHhh
Confidence 9999999999999 999999999999999999999 5566644433221 3468999999999987643
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.9e-23 Score=187.13 Aligned_cols=127 Identities=11% Similarity=0.073 Sum_probs=113.2
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcCCCCCcEEE
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDRKPSKCVV 279 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi~p~~~v~ 279 (361)
..++||+.++|+.|++.|++++++||+....+...++.+|+..+|+.++++++....| |++|..+++++|++|++|++
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~ 177 (233)
T 3umb_A 98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDHVLSVDAVRLYKTAPAAYALAPRAFGVPAAQILF 177 (233)
T ss_dssp CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSEEEEGGGTTCCTTSHHHHTHHHHHHTSCGGGEEE
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCEEEEecccCCCCcCHHHHHHHHHHhCCCcccEEE
Confidence 5789999999999999999999999999999999999999999999999999877665 57999999999999999999
Q ss_pred EcCChHHHHHHHHcCCeEEEEeCC-CCcccc-cCcceEeCChhhhHHHHHH
Q 018088 280 FEDDPRAITAAHNCTMMAVGLIGA-HRAYDL-VQADLAVANFNELSVINLR 328 (361)
Q Consensus 280 IGDs~~Di~aA~~aG~~~v~V~g~-~~~~~l-~~ad~vi~sl~EL~~~ll~ 328 (361)
|||+.+|+.||+++|+.+++|... .....+ ..||++++++.||..++.+
T Consensus 178 vGD~~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~~~~~el~~~l~~ 228 (233)
T 3umb_A 178 VSSNGWDACGATWHGFTTFWINRLGHPPEALDVAPAAAGHDMRDLLQFVQA 228 (233)
T ss_dssp EESCHHHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEESSHHHHHHHHHC
T ss_pred EeCCHHHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEECCHHHHHHHHHH
Confidence 999999999999999999999543 333333 4699999999999987543
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=99.90 E-value=3.4e-23 Score=190.89 Aligned_cols=199 Identities=13% Similarity=0.118 Sum_probs=135.0
Q ss_pred CceEEEEece-eccccHHH-------HHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHH---HccCCChHHHHHH
Q 018088 118 EAYGLIFSWD-VVADTRAL-------KLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKV---LLWGKEESELDRL 186 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~-------~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~---l~~~~~~~~~~~l 186 (361)
++++|||||| ||+|++.. +.+.+.++++++|..... ......+.+.....+...+ +...........+
T Consensus 30 ~ikaviFDlDGTLvDs~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~~~ 108 (253)
T 2g80_A 30 NYSTYLLDIEGTVCPISFVKETLFPYFTNKVPQLVQQDTRDSPV-SNILSQFHIDNKEQLQAHILELVAKDVKDPILKQL 108 (253)
T ss_dssp CCSEEEECCBTTTBCTHHHHHTHHHHHHHHHHHHHHSCCTTSHH-HHHHHTTCCCCHHHHHHHHHHHHHTTCCCHHHHHH
T ss_pred CCcEEEEcCCCCcccccccchhhHHHHHHHHHHHHHHhcCcHHH-HHHHHHhhhccHHHHHHHHHHHHhcccchHHHHHH
Confidence 4799999999 99999743 345555666666643211 1122223333444443332 2222222222222
Q ss_pred HH-HHHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhC--C---------CCcccceeEecCC
Q 018088 187 NS-RLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERM--G---------LLKYFQAIVSEED 254 (361)
Q Consensus 187 ~~-~~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~l--g---------l~~~Fd~iv~~e~ 254 (361)
.. .+...|.. ......++||+.++|+. |++++|+||+++..+...++.. | +.++|+.++....
T Consensus 109 ~~~~~~~~~~~-~~~~~~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~~~~~f~~~~ 183 (253)
T 2g80_A 109 QGYVWAHGYES-GQIKAPVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINT 183 (253)
T ss_dssp HHHHHHHHHHT-TSCCBCCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHHH
T ss_pred HHHHHHHHHHh-CcccCCCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhhcceEEeeec
Confidence 22 23333332 22345789999999988 8999999999999999999976 4 7777777765532
Q ss_pred -CCCCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcc-cccCcceEeCChhhh
Q 018088 255 -GMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAY-DLVQADLAVANFNEL 322 (361)
Q Consensus 255 -~~~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~-~l~~ad~vi~sl~EL 322 (361)
..++.|++|+.+++++|++|++|+||||+.+|+.+|++|||.+|+|...+... ....++.+|+++.||
T Consensus 184 ~g~KP~p~~~~~a~~~lg~~p~~~l~vgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~eL 253 (253)
T 2g80_A 184 SGKKTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQVYKNFETL 253 (253)
T ss_dssp HCCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEECCTTSCCCCSSCCSCEESCSTTC
T ss_pred cCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEEcCCCCCCcccccCCCccCChhhC
Confidence 23555789999999999999999999999999999999999999994322222 112488999999885
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=2.6e-22 Score=181.30 Aligned_cols=125 Identities=15% Similarity=0.130 Sum_probs=111.1
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcCCCCCcEEE
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDRKPSKCVV 279 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi~p~~~v~ 279 (361)
..++||+.++|+.|+++|++++++||+....+...++.+|+..+|+.+++++++...| |++|..+++++|++|++|++
T Consensus 104 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~ 183 (240)
T 2no4_A 104 LSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLDSCLSADDLKIYKPDPRIYQFACDRLGVNPNEVCF 183 (240)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHHTCCGGGEEE
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHcCEEEEccccCCCCCCHHHHHHHHHHcCCCcccEEE
Confidence 5789999999999999999999999999999999999999999999999998876554 67999999999999999999
Q ss_pred EcCChHHHHHHHHcCCeEEEEeCCCCcccc-cCc-ceEeCChhhhHHHH
Q 018088 280 FEDDPRAITAAHNCTMMAVGLIGAHRAYDL-VQA-DLAVANFNELSVIN 326 (361)
Q Consensus 280 IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l-~~a-d~vi~sl~EL~~~l 326 (361)
|||+.+|+.+|+++|+.+++|......... ..| |++++++.||..++
T Consensus 184 iGD~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~el~~~l 232 (240)
T 2no4_A 184 VSSNAWDLGGAGKFGFNTVRINRQGNPPEYEFAPLKHQVNSLSELWPLL 232 (240)
T ss_dssp EESCHHHHHHHHHHTCEEEEECTTCCCCCCTTSCCSEEESSGGGHHHHH
T ss_pred EeCCHHHHHHHHHCCCEEEEECCCCCCCcccCCCCceeeCCHHHHHHHH
Confidence 999999999999999999999443333222 357 99999999998764
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.2e-22 Score=181.65 Aligned_cols=127 Identities=18% Similarity=0.189 Sum_probs=112.6
Q ss_pred CCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcCCCCCcEE
Q 018088 201 VTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDRKPSKCV 278 (361)
Q Consensus 201 ~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi~p~~~v 278 (361)
...++||+.++|+.|++. ++++++||+....+...++.+|+..+|+.++++++....| |++|..+++++|++|++|+
T Consensus 98 ~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~ 176 (234)
T 3u26_A 98 YGELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAV 176 (234)
T ss_dssp HCCBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGEE
T ss_pred hCCcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHcceeEeccccCCCCcCHHHHHHHHHHcCCCchhEE
Confidence 447899999999999999 9999999999999999999999999999999998766555 6789999999999999999
Q ss_pred EEcCCh-HHHHHHHHcCCeEEEEeCCCC-cccccCcceEeCChhhhHHHHHH
Q 018088 279 VFEDDP-RAITAAHNCTMMAVGLIGAHR-AYDLVQADLAVANFNELSVINLR 328 (361)
Q Consensus 279 ~IGDs~-~Di~aA~~aG~~~v~V~g~~~-~~~l~~ad~vi~sl~EL~~~ll~ 328 (361)
+|||+. ||+.||+++|+.+++|...+. ......||+++.++.||..++.+
T Consensus 177 ~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~a~~~~~~~~el~~~l~~ 228 (234)
T 3u26_A 177 YVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREVIKIVDE 228 (234)
T ss_dssp EEESCTTTTHHHHHTTTCEEEEECSSSTTGGGGGGCSEEESSTHHHHHHHHH
T ss_pred EEcCCcHHHHHHHHHcCCEEEEECCCCCccccccCCCEeeCCHHHHHHHHHH
Confidence 999998 999999999999999954433 33445799999999999887654
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.4e-22 Score=179.23 Aligned_cols=127 Identities=16% Similarity=0.147 Sum_probs=112.9
Q ss_pred cCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcCCCCCcE
Q 018088 200 SVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDRKPSKC 277 (361)
Q Consensus 200 ~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi~p~~~ 277 (361)
....++||+.++|+.|++.|++++++||.....+...++.+|+..+|+.++++++....| |+.|..+++++|++|++|
T Consensus 93 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 172 (230)
T 3um9_A 93 LSLTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDHLISVDEVRLFKPHQKVYELAMDTLHLGESEI 172 (230)
T ss_dssp TSCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEGGGTTCCTTCHHHHHHHHHHHTCCGGGE
T ss_pred hcCCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcceeEehhhcccCCCChHHHHHHHHHhCCCcccE
Confidence 345789999999999999999999999999999999999999999999999999876655 689999999999999999
Q ss_pred EEEcCChHHHHHHHHcCCeEEEEeCCCCc-ccc-cCcceEeCChhhhHHHH
Q 018088 278 VVFEDDPRAITAAHNCTMMAVGLIGAHRA-YDL-VQADLAVANFNELSVIN 326 (361)
Q Consensus 278 v~IGDs~~Di~aA~~aG~~~v~V~g~~~~-~~l-~~ad~vi~sl~EL~~~l 326 (361)
++|||+.+|+.||+++|+.++++...... ... ..||++++++.||..++
T Consensus 173 ~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l 223 (230)
T 3um9_A 173 LFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSDVGVLASRF 223 (230)
T ss_dssp EEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEESSHHHHHHTC
T ss_pred EEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeCCHHHHHHHH
Confidence 99999999999999999999999544332 222 47999999999998764
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.89 E-value=3.3e-22 Score=178.64 Aligned_cols=202 Identities=18% Similarity=0.187 Sum_probs=145.5
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHH---hCCCCCch--HH---HHHHHhc------CCH----HHHHHHHH-ccCC
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFE---EGKEIPQE--GD---VLRQILN------AGA----DHVLHKVL-LWGK 178 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~---~G~~~~~~--~~---~~~~~~g------~~~----~~~l~~~l-~~~~ 178 (361)
+|+|+||+| ||+++...+..+..++++. .+...... .. ....+.. ... ...+...+ ..+.
T Consensus 2 ik~i~fDlDGTL~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (230)
T 3vay_A 2 IKLVTFDLDDTLWDTAPAIVGAEAALRDWLAEQAPKLGPVPVEHLWEIRSRLLDEDPSFKHRISALRRRVLFHALEDAGY 81 (230)
T ss_dssp CCEEEECCBTTTBCSHHHHHHHHHHHHHHHHHHCTTTCSCCHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHHTTTC
T ss_pred eeEEEecCcccCcCCchHHHHHHHHHHHHHHHhcCcchhhHHHHHHHHHHHHHHhCccccccHHHHHHHHHHHHHHHhCC
Confidence 689999999 9999998777766555443 34332210 00 1111100 011 11222222 2344
Q ss_pred ChHHHHHHHHHHHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCC
Q 018088 179 EESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMES 258 (361)
Q Consensus 179 ~~~~~~~l~~~~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~ 258 (361)
+......+.....+.+.... ....++||+.++|+.|++. ++++++||+... ++.+|+..+|+.++++++....
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~~f~~~~~~~~~~~~ 154 (230)
T 3vay_A 82 DSDEAQQLADESFEVFLHGR-HQVQIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLADYFAFALCAEDLGIG 154 (230)
T ss_dssp CHHHHHHHHHHHHHHHHHHH-TCCCBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGGGCSEEEEHHHHTCC
T ss_pred ChhhhHHHHHHHHHHHHHhh-ccCccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHHHeeeeEEccccCCC
Confidence 55555555555555555433 4567899999999999998 999999998755 7889999999999999876655
Q ss_pred C--hHHHHHHHHHcCCCCCcEEEEcCCh-HHHHHHHHcCCeEEEEeCCC-CcccccCcceEeCChhhhHHHHH
Q 018088 259 M--AHRFLSAAVKLDRKPSKCVVFEDDP-RAITAAHNCTMMAVGLIGAH-RAYDLVQADLAVANFNELSVINL 327 (361)
Q Consensus 259 K--P~~~~~~~~klgi~p~~~v~IGDs~-~Di~aA~~aG~~~v~V~g~~-~~~~l~~ad~vi~sl~EL~~~ll 327 (361)
| |++|..+++++|++|++|++|||+. +|+.||+++|+.+++|.... .......||++++++.||..++.
T Consensus 155 kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~l~el~~~l~ 227 (230)
T 3vay_A 155 KPDPAPFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDADRLPDAEIHNLSQLPEVLA 227 (230)
T ss_dssp TTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCSSSCCSEEESSGGGHHHHHH
T ss_pred CcCHHHHHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcccCCCCeeECCHHHHHHHHH
Confidence 5 6899999999999999999999998 99999999999999994433 33334579999999999988754
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=99.89 E-value=3.3e-22 Score=179.24 Aligned_cols=128 Identities=12% Similarity=0.081 Sum_probs=111.1
Q ss_pred CCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcCCCCCcEE
Q 018088 201 VTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDRKPSKCV 278 (361)
Q Consensus 201 ~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi~p~~~v 278 (361)
...++||+.++|+.|+++|++++++||+....+...++.+|+..+|+.+++++++...| |+.|..+++++|++|++|+
T Consensus 93 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 172 (232)
T 1zrn_A 93 RLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAIL 172 (232)
T ss_dssp GCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGEE
T ss_pred cCCCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhheEEEecccCCCCCCHHHHHHHHHHcCCCcccEE
Confidence 34679999999999999999999999999999999999999999999999998876555 6799999999999999999
Q ss_pred EEcCChHHHHHHHHcCCeEEEEeCCCCc-cc-ccCcceEeCChhhhHHHHHH
Q 018088 279 VFEDDPRAITAAHNCTMMAVGLIGAHRA-YD-LVQADLAVANFNELSVINLR 328 (361)
Q Consensus 279 ~IGDs~~Di~aA~~aG~~~v~V~g~~~~-~~-l~~ad~vi~sl~EL~~~ll~ 328 (361)
+|||+.+|+.+|+++|+.++++...... .. ...||+++.++.|+..++.+
T Consensus 173 ~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~ 224 (232)
T 1zrn_A 173 FVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAVVELFET 224 (232)
T ss_dssp EEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESSHHHHHTTC--
T ss_pred EEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEECCHHHHHHHHHh
Confidence 9999999999999999999999543322 22 24689999999999876543
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.6e-23 Score=187.57 Aligned_cols=197 Identities=15% Similarity=0.056 Sum_probs=137.0
Q ss_pred CceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHH--HhcCC------------HHHHHHHHHccCCChHH
Q 018088 118 EAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQ--ILNAG------------ADHVLHKVLLWGKEESE 182 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~--~~g~~------------~~~~l~~~l~~~~~~~~ 182 (361)
++++|+||+| ||+|+...+..++.++++++|++.......... ..|.. ...++.. ++.......
T Consensus 2 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~ 80 (220)
T 2zg6_A 2 KYKAVLVDFGNTLVGFKPVFYEKVYQVLKDNGYDLDLRKVFRAYAKAMGMINYPDEDGLEHVDPKDFLYI-LGIYPSERL 80 (220)
T ss_dssp CCCEEEECSBTTTEEEEETTHHHHHHHHHHTTCCCCHHHHHHHHHHHGGGCCC-----CCCCCHHHHHHH-HTCCCCHHH
T ss_pred CceEEEEcCCCceecccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhhhccCCCccccccccHHHHHHH-cCCCCcHHH
Confidence 3689999999 999999888899999999999876533222111 12221 2333333 222222221
Q ss_pred HHHHHHHHHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCCh--
Q 018088 183 LDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMA-- 260 (361)
Q Consensus 183 ~~~l~~~~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP-- 260 (361)
. ..+.+.+. ......++||+.++|+.|+++|++++++||+.. .+...++.+|+..+|+.+++++++...||
T Consensus 81 ~----~~~~~~~~--~~~~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~ 153 (220)
T 2zg6_A 81 V----KELKEADI--RDGEAFLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKYFDALALSYEIKAVKPNP 153 (220)
T ss_dssp H----HHHHHTTT--TCEEEEECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGGCSEEC-----------C
T ss_pred H----HHHHHHhh--cccCceECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhHeeEEEeccccCCCCCCH
Confidence 1 12221111 112346799999999999999999999999976 58889999999999999999998877776
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCChH-HHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhhhHHHHHH
Q 018088 261 HRFLSAAVKLDRKPSKCVVFEDDPR-AITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNELSVINLR 328 (361)
Q Consensus 261 ~~~~~~~~klgi~p~~~v~IGDs~~-Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~EL~~~ll~ 328 (361)
++|..+++++|++| ++|||+.+ |+.+|+++|+.+++|.......+. +++++++.||..++.+
T Consensus 154 ~~~~~~~~~~~~~~---~~vgD~~~~Di~~a~~aG~~~i~v~~~~~~~~~---~~~i~~l~el~~~l~~ 216 (220)
T 2zg6_A 154 KIFGFALAKVGYPA---VHVGDIYELDYIGAKRSYVDPILLDRYDFYPDV---RDRVKNLREALQKIEE 216 (220)
T ss_dssp CHHHHHHHHHCSSE---EEEESSCCCCCCCSSSCSEEEEEBCTTSCCTTC---CSCBSSHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCe---EEEcCCchHhHHHHHHCCCeEEEECCCCCCCCc---ceEECCHHHHHHHHHH
Confidence 59999999999998 99999999 999999999999998543322222 6789999999887654
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=99.89 E-value=5.1e-22 Score=172.34 Aligned_cols=173 Identities=16% Similarity=0.148 Sum_probs=132.5
Q ss_pred CCceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHHHHHHHH
Q 018088 117 DEAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLYY 195 (361)
Q Consensus 117 ~~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~ 195 (361)
+.+++|+||+| ||+++...+..++.++++++|++.... .....+.+......... +.. ... ....+.+.+.
T Consensus 4 M~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~-~~~--~~~----~~~~~~~~~~ 75 (190)
T 2fi1_A 4 MKYHDYIWDLGGTLLDNYETSTAAFVETLALYGITQDHD-SVYQALKVSTPFAIETF-APN--LEN----FLEKYKENEA 75 (190)
T ss_dssp CCCSEEEECTBTTTBCHHHHHHHHHHHHHHHTTCCCCHH-HHHHHHHHCHHHHHHHH-CTT--CTT----HHHHHHHHHH
T ss_pred CcccEEEEeCCCCcCCCHHHHHHHHHHHHHHhCCCCCHH-HHHHHHccccHHHHHHH-hhh--HHH----HHHHHHHHHH
Confidence 34789999999 999999999999999999999876433 22333333333333322 211 111 1223333344
Q ss_pred HhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCC--ChHHHHHHHHHcCCC
Q 018088 196 DNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMES--MAHRFLSAAVKLDRK 273 (361)
Q Consensus 196 ~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~--KP~~~~~~~~klgi~ 273 (361)
+..... .++||+.++|+.|+++|++++++||... .+...++.+|+..+|+.++++++.... ||+.|..+++++|++
T Consensus 76 ~~~~~~-~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~ 153 (190)
T 2fi1_A 76 RELEHP-ILFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQIS 153 (190)
T ss_dssp HHTTSC-CBCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTCS
T ss_pred HhcCcC-ccCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhheeeeeeccccCCCCCCHHHHHHHHHHcCCC
Confidence 443333 4899999999999999999999999864 688889999999999999999877555 568999999999998
Q ss_pred CCcEEEEcCChHHHHHHHHcCCeEEEEe
Q 018088 274 PSKCVVFEDDPRAITAAHNCTMMAVGLI 301 (361)
Q Consensus 274 p~~~v~IGDs~~Di~aA~~aG~~~v~V~ 301 (361)
+|++|||+.+|+.||+++|+.++++.
T Consensus 154 --~~~~iGD~~~Di~~a~~aG~~~~~~~ 179 (190)
T 2fi1_A 154 --SGLVIGDRPIDIEAGQAAGLDTHLFT 179 (190)
T ss_dssp --SEEEEESSHHHHHHHHHTTCEEEECS
T ss_pred --eEEEEcCCHHHHHHHHHcCCeEEEEC
Confidence 99999999999999999999999874
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.89 E-value=7.5e-24 Score=191.21 Aligned_cols=200 Identities=15% Similarity=0.111 Sum_probs=140.8
Q ss_pred CceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchH----HHHHHHhcCC-HHHHHHHHHccCCChHHHHHHHHHHH
Q 018088 118 EAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEG----DVLRQILNAG-ADHVLHKVLLWGKEESELDRLNSRLT 191 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~----~~~~~~~g~~-~~~~l~~~l~~~~~~~~~~~l~~~~~ 191 (361)
.+++|+||+| ||+|+...+..+|.++++++|++..... .......|.. ....+..+........ ....+.
T Consensus 10 ~~k~viFDlDGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~----~~~~~~ 85 (231)
T 2p11_A 10 HDIVFLFDCDNTLLDNDHVLADLRAHMMREFGAQNSARYWEIFETLRTELGYADYLGALQRYRLEQPRDT----RLLLMS 85 (231)
T ss_dssp CSEEEEECCBTTTBCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHCTTCT----GGGGGH
T ss_pred CCeEEEEcCCCCCEecHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHhcCchHHHHHHHHHHhccccch----HHHHHH
Confidence 4789999999 9999999999999999999986532110 0111112322 2222222111100000 011122
Q ss_pred HHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcC
Q 018088 192 QLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLD 271 (361)
Q Consensus 192 ~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klg 271 (361)
+.+... .....++||+.++|+.|+++| +++|+||+....+...++.+|+.++|+.+++. ..+||..+..+++ +
T Consensus 86 ~~~~~~-~~~~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~~f~~~~~~---~~~K~~~~~~~~~--~ 158 (231)
T 2p11_A 86 SFLIDY-PFASRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWDEVEGRVLI---YIHKELMLDQVME--C 158 (231)
T ss_dssp HHHHHC-CGGGGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHHHTTTCEEE---ESSGGGCHHHHHH--H
T ss_pred HHHHHH-HHhCCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHHhcCeeEEe---cCChHHHHHHHHh--c
Confidence 222222 234578999999999999999 99999999999999999999999999876653 3567887777666 7
Q ss_pred CCCCcEEEEcCChH---HHHHHHHcCCeEEEEeCC-C--Ccccc--c-CcceEeCChhhhHHHHHH
Q 018088 272 RKPSKCVVFEDDPR---AITAAHNCTMMAVGLIGA-H--RAYDL--V-QADLAVANFNELSVINLR 328 (361)
Q Consensus 272 i~p~~~v~IGDs~~---Di~aA~~aG~~~v~V~g~-~--~~~~l--~-~ad~vi~sl~EL~~~ll~ 328 (361)
++|++|++|||+.+ |+.+|+++|+.+|+|... . ....+ . .++++++++.||..++.+
T Consensus 159 ~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i~~~~el~~~l~~ 224 (231)
T 2p11_A 159 YPARHYVMVDDKLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTVERIGDLVEMDAE 224 (231)
T ss_dssp SCCSEEEEECSCHHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEESSGGGGGGCGGG
T ss_pred CCCceEEEEcCccchhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCceeecCHHHHHHHHHH
Confidence 99999999999999 999999999999999433 2 22222 2 489999999999776543
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=99.89 E-value=3.8e-22 Score=175.49 Aligned_cols=122 Identities=20% Similarity=0.211 Sum_probs=107.4
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcCCCCCcEEE
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDRKPSKCVV 279 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi~p~~~v~ 279 (361)
..++||+.+ |+.|+++ ++++++||.....+...++.+|+..+|+.+++++++...| |++|..+++++| |++|++
T Consensus 73 ~~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~--~~~~~~ 148 (201)
T 2w43_A 73 LKAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYFKGIFSAESVKEYKPSPKVYKYFLDSIG--AKEAFL 148 (201)
T ss_dssp CEECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHT--CSCCEE
T ss_pred cccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhCcEEEehhhcCCCCCCHHHHHHHHHhcC--CCcEEE
Confidence 478999999 9999999 9999999999999999999999999999999998876655 789999999999 999999
Q ss_pred EcCChHHHHHHHHcCCeEEEEeCC-CCccc-ccCcceEeCChhhhHHHHH
Q 018088 280 FEDDPRAITAAHNCTMMAVGLIGA-HRAYD-LVQADLAVANFNELSVINL 327 (361)
Q Consensus 280 IGDs~~Di~aA~~aG~~~v~V~g~-~~~~~-l~~ad~vi~sl~EL~~~ll 327 (361)
|||+.+|+.||+++|+.++++... ..... ...||+++.++.||..++.
T Consensus 149 vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~ 198 (201)
T 2w43_A 149 VSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVNDFKELYEWIL 198 (201)
T ss_dssp EESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEESSHHHHHHHHH
T ss_pred EeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEECCHHHHHHHHH
Confidence 999999999999999999999443 22222 2469999999999987654
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=99.87 E-value=1.9e-22 Score=180.52 Aligned_cols=190 Identities=15% Similarity=0.116 Sum_probs=130.7
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhc-CCHHHHHHHHHcc-CCChHHHHHHHHHHHHHHH
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILN-AGADHVLHKVLLW-GKEESELDRLNSRLTQLYY 195 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g-~~~~~~l~~~l~~-~~~~~~~~~l~~~~~~~~~ 195 (361)
+++||||+| ||+|++ .+.++++.+|............+.+ ......+...... .... ..+.+.+.
T Consensus 14 ~k~viFD~DGTLvd~~-----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~ 81 (225)
T 1nnl_A 14 ADAVCFDVDSTVIREE-----GIDELAKICGVEDAVSEMTRRAMGGAVPFKAALTERLALIQPSR-------EQVQRLIA 81 (225)
T ss_dssp CSEEEEETBTTTBSSC-----HHHHHHHHTTCTTTC------------CHHHHHHHHHHHHCCCH-------HHHHHHHH
T ss_pred CCEEEEeCcccccccc-----cHHHHHHHhCCcHHHHHHHHHHHcCCccHHHHHHHHHHHhcCCH-------HHHHHHHH
Confidence 689999999 999998 4567888888765433222222221 1233333322211 1111 11112121
Q ss_pred HhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCC--cccceeE--------ecCCCC------CCC
Q 018088 196 DNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLL--KYFQAIV--------SEEDGM------ESM 259 (361)
Q Consensus 196 ~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~--~~Fd~iv--------~~e~~~------~~K 259 (361)
. ...+++||+.++|+.|+++|++++|+||+....+...++.+|+. .+|+.++ ++.+.. .+|
T Consensus 82 ~---~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~K 158 (225)
T 1nnl_A 82 E---QPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGK 158 (225)
T ss_dssp H---SCCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHH
T ss_pred h---ccCCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeEEEcCCCcEecCCCCCcccCCCch
Confidence 1 23578999999999999999999999999999999999999997 4887664 333322 368
Q ss_pred hHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcc-cccCcceEeCChhhhHHHH
Q 018088 260 AHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAY-DLVQADLAVANFNELSVIN 326 (361)
Q Consensus 260 P~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~-~l~~ad~vi~sl~EL~~~l 326 (361)
|++|..+++++|+ ++|++|||+.+|+.+|+++|+ +|++....... ....+|++++++.|+..++
T Consensus 159 p~~~~~~~~~~~~--~~~~~vGDs~~Di~~a~~ag~-~i~~~~~~~~~~~~~~~~~~~~~~~el~~~l 223 (225)
T 1nnl_A 159 GKVIKLLKEKFHF--KKIIMIGDGATDMEACPPADA-FIGFGGNVIRQQVKDNAKWYITDFVELLGEL 223 (225)
T ss_dssp HHHHHHHHHHHCC--SCEEEEESSHHHHTTTTTSSE-EEEECSSCCCHHHHHHCSEEESCGGGGCC--
T ss_pred HHHHHHHHHHcCC--CcEEEEeCcHHhHHHHHhCCe-EEEecCccccHHHHhcCCeeecCHHHHHHHH
Confidence 9999999999998 789999999999999999999 78774322222 2246899999999987653
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=99.87 E-value=7.2e-21 Score=173.60 Aligned_cols=126 Identities=13% Similarity=0.149 Sum_probs=110.1
Q ss_pred CCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcCCCCCcEE
Q 018088 201 VTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDRKPSKCV 278 (361)
Q Consensus 201 ~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi~p~~~v 278 (361)
...++||+.++|+.|+ |++++++||+....+...++.+|+..+|+.+++++++...| |+.|..+++++|++|++|+
T Consensus 91 ~~~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 168 (253)
T 1qq5_A 91 RLTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVL 168 (253)
T ss_dssp SCCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGEE
T ss_pred cCCCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhccEEEEccccCCCCCCHHHHHHHHHHcCCCHHHEE
Confidence 3578999999999999 89999999999999999999999999999999998876555 6799999999999999999
Q ss_pred EEcCChHHHHHHHHcCCeEEEEeC-----------------------CCC-ccc-ccCcceEeCChhhhHHHHHH
Q 018088 279 VFEDDPRAITAAHNCTMMAVGLIG-----------------------AHR-AYD-LVQADLAVANFNELSVINLR 328 (361)
Q Consensus 279 ~IGDs~~Di~aA~~aG~~~v~V~g-----------------------~~~-~~~-l~~ad~vi~sl~EL~~~ll~ 328 (361)
+|||+.+|+.||+++|+.++++.. ... ... ...||+++.++.||..++.+
T Consensus 169 ~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~ 243 (253)
T 1qq5_A 169 FVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPALGDLPRLVRG 243 (253)
T ss_dssp EEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESSGGGHHHHHHH
T ss_pred EEeCChhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCCCCeeeCCHHHHHHHHHH
Confidence 999999999999999999999854 111 112 24699999999999987644
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=99.87 E-value=8e-22 Score=172.92 Aligned_cols=174 Identities=12% Similarity=0.109 Sum_probs=127.5
Q ss_pred CceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHH-----hc-CCHHHHHHHHHccCCChHHHHHHHHHH
Q 018088 118 EAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQI-----LN-AGADHVLHKVLLWGKEESELDRLNSRL 190 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~-----~g-~~~~~~l~~~l~~~~~~~~~~~l~~~~ 190 (361)
.+++|+||+| ||+++.. ...++.++++++|.+........... .+ ......+............. ..+
T Consensus 3 ~~k~viFDlDGTL~d~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 77 (200)
T 3cnh_A 3 TIKALFWDIGGVLLTNGW-DREQRADVAQRFGLDTDDFTERHRLAAPELELGRMTLAEYLEQVVFYQPRDFTP----EDF 77 (200)
T ss_dssp CCCEEEECCBTTTBCCSS-CHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHTTSSCHHHHHHHHTTTSCCSSCH----HHH
T ss_pred CceEEEEeCCCeeECCCc-chHHHHHHHHHcCCCHHHHHHHHHhhchHHHcCCcCHHHHHHHHHHHcCCCCCH----HHH
Confidence 3789999999 9999764 34678888889987543221111111 11 12233333332211100000 111
Q ss_pred HHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHH
Q 018088 191 TQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAV 268 (361)
Q Consensus 191 ~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~ 268 (361)
.+.+ .....++||+.++|+.|+++| +++++||++...+...++.+|+..+|+.+++++++...| |++|..+++
T Consensus 78 ~~~~----~~~~~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~ 152 (200)
T 3cnh_A 78 RAVM----EEQSQPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFLLAFFTSSALGVMKPNPAMYRLGLT 152 (200)
T ss_dssp HHHH----HHTCCBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTCSCEEEHHHHSCCTTCHHHHHHHHH
T ss_pred HHHH----HhcCccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhcceEEeecccCCCCCCHHHHHHHHH
Confidence 1211 223468999999999999999 999999999999999999999999999999998765555 679999999
Q ss_pred HcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEe
Q 018088 269 KLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLI 301 (361)
Q Consensus 269 klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~ 301 (361)
++|++|++|++|||+.+|+.+|+++|+.+++|.
T Consensus 153 ~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~ 185 (200)
T 3cnh_A 153 LAQVRPEEAVMVDDRLQNVQAARAVGMHAVQCV 185 (200)
T ss_dssp HHTCCGGGEEEEESCHHHHHHHHHTTCEEEECS
T ss_pred HcCCCHHHeEEeCCCHHHHHHHHHCCCEEEEEC
Confidence 999999999999999999999999999999974
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.1e-21 Score=173.92 Aligned_cols=123 Identities=16% Similarity=0.234 Sum_probs=101.3
Q ss_pred CCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcCCCC-CcE
Q 018088 201 VTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDRKP-SKC 277 (361)
Q Consensus 201 ~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi~p-~~~ 277 (361)
...++||+.++|+.|+++|++++|+||.....+...+ + .+|+.+++++++..+| |++|..+++++|+.| ++|
T Consensus 34 ~~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~---~--~~~d~v~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~ 108 (196)
T 2oda_A 34 HAQLTPGAQNALKALRDQGMPCAWIDELPEALSTPLA---A--PVNDWMIAAPRPTAGWPQPDACWMALMALNVSQLEGC 108 (196)
T ss_dssp GGSBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHH---T--TTTTTCEECCCCSSCTTSTHHHHHHHHHTTCSCSTTC
T ss_pred cCCcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhc---C--ccCCEEEECCcCCCCCCChHHHHHHHHHcCCCCCccE
Confidence 3478999999999999999999999999887774433 3 5789999999876665 679999999999975 899
Q ss_pred EEEcCChHHHHHHHHcCCeEEEEe-CCCC-----------------------ccc--ccCcceEeCChhhhHHHHHH
Q 018088 278 VVFEDDPRAITAAHNCTMMAVGLI-GAHR-----------------------AYD--LVQADLAVANFNELSVINLR 328 (361)
Q Consensus 278 v~IGDs~~Di~aA~~aG~~~v~V~-g~~~-----------------------~~~--l~~ad~vi~sl~EL~~~ll~ 328 (361)
+||||+.+|+.+|++||+.+|+|. |.+. ... ..+||++++++.||..++..
T Consensus 109 v~VGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~d~vi~~~~eL~~~l~~ 185 (196)
T 2oda_A 109 VLISGDPRLLQSGLNAGLWTIGLASCGPLCGLSPSQWQALNNAEREQRRAQATLKLYSLGVHSVIDHLGELESCLAD 185 (196)
T ss_dssp EEEESCHHHHHHHHHHTCEEEEESSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEESSGGGHHHHHHH
T ss_pred EEEeCCHHHHHHHHHCCCEEEEEccCCccccccHHHhhhcchhhhhhhHHHHHHHHHHcCCCEEeCCHHHHHHHHHH
Confidence 999999999999999999999994 4321 011 13699999999999876543
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.8e-21 Score=170.93 Aligned_cols=125 Identities=15% Similarity=0.189 Sum_probs=109.4
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCH---HHHHHHHHhCCCCcccceeEecCCC----CCCC--hHHHHHHHHHcCC
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDR---RKMVEALERMGLLKYFQAIVSEEDG----MESM--AHRFLSAAVKLDR 272 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~---~~~~~~L~~lgl~~~Fd~iv~~e~~----~~~K--P~~~~~~~~klgi 272 (361)
..++||+.++|+.|+++|++++|+||+.. ..+...++.+|+..+|+.++++++. ...| |++|..+++++|+
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~ 112 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSELQPGKMEKPDKTIFDFTLNALQI 112 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEEEEEECCTTSSTTCCCTTSHHHHHHHHHHHTC
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheEEEEEccccccccCCCCcCHHHHHHHHHHcCC
Confidence 47899999999999999999999999886 8999999999999999999999875 4445 6799999999999
Q ss_pred CCCcEEEEcCC-hHHHHHHHHcCCeEEEEeCCCC---cccc--cCcceEeC--ChhhhHHHH
Q 018088 273 KPSKCVVFEDD-PRAITAAHNCTMMAVGLIGAHR---AYDL--VQADLAVA--NFNELSVIN 326 (361)
Q Consensus 273 ~p~~~v~IGDs-~~Di~aA~~aG~~~v~V~g~~~---~~~l--~~ad~vi~--sl~EL~~~l 326 (361)
+|++|+||||+ .+|+.+|+++|+.+|+|..... ...+ ..++++++ ++.+|..++
T Consensus 113 ~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l 174 (189)
T 3ib6_A 113 DKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEAL 174 (189)
T ss_dssp CGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGHHHHH
T ss_pred CcccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccHHhHHHHH
Confidence 99999999999 6999999999999999944332 1222 27899999 999998764
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=99.86 E-value=8.8e-21 Score=170.30 Aligned_cols=175 Identities=7% Similarity=0.011 Sum_probs=124.6
Q ss_pred hcCCCCceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHh----------cC-CHHHHHHHH---HccC
Q 018088 113 AMKPDEAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQIL----------NA-GADHVLHKV---LLWG 177 (361)
Q Consensus 113 ~m~~~~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~----------g~-~~~~~l~~~---l~~~ 177 (361)
+|+.+.+++|+||+| ||+++.. ..+.+.++++|++... .....+. |. ....++..+ ++..
T Consensus 22 sM~~~~ik~viFD~DGTL~d~~~---~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 96 (229)
T 4dcc_A 22 SMKSKGIKNLLIDLGGVLINLDR---ERCIENFKKIGFQNIE--EKFCTHQLDGIFLQQEKGLITPAEFRDGIREMMGKM 96 (229)
T ss_dssp ----CCCCEEEECSBTTTBCBCH---HHHHHHHHHHTCTTHH--HHHHHTHHHHHHHHHHTTCSCHHHHHHHHHHHHTSC
T ss_pred ccccCCCCEEEEeCCCeEEeCCh---HHHHHHHHHhCCCcHH--HHHHHhcCcHHHHHHHCCCCCHHHHHHHHHHHhCCC
Confidence 344445899999999 9999873 4666778888876322 1212111 11 222222221 1111
Q ss_pred CChHHHHHHHHHHHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHH------HhCCCCcccceeEe
Q 018088 178 KEESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEAL------ERMGLLKYFQAIVS 251 (361)
Q Consensus 178 ~~~~~~~~l~~~~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L------~~lgl~~~Fd~iv~ 251 (361)
..... +.+.+.+. ...+.||+.++|+.|++. ++++|+||+....+...+ +.+|+..+|+.+++
T Consensus 97 ~~~~~-------~~~~~~~~---~~~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~i~~ 165 (229)
T 4dcc_A 97 VSDKQ-------IDAAWNSF---LVDIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKTYL 165 (229)
T ss_dssp CCHHH-------HHHHHHTT---BCCCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSEEEE
T ss_pred CCHHH-------HHHHHHHH---HHhccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCEEEe
Confidence 22211 11222222 124689999999999999 999999999999888555 77899999999999
Q ss_pred cCCCCCCCh--HHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCC
Q 018088 252 EEDGMESMA--HRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGA 303 (361)
Q Consensus 252 ~e~~~~~KP--~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~ 303 (361)
++++...|| ++|..+++++|++|++|++|||+.+|+.+|+++|+.+|++.+.
T Consensus 166 ~~~~~~~KP~~~~~~~~~~~~g~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~ 219 (229)
T 4dcc_A 166 SYEMKMAKPEPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQELGISTYTPKAG 219 (229)
T ss_dssp HHHHTCCTTCHHHHHHHHHHHTCCGGGEEEECSCHHHHHHHHHTTCEEECCCTT
T ss_pred ecccCCCCCCHHHHHHHHHHcCCCHHHeEEECCCHHHHHHHHHcCCEEEEECCH
Confidence 998777665 8999999999999999999999999999999999999998544
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.86 E-value=5.7e-22 Score=171.82 Aligned_cols=125 Identities=15% Similarity=0.121 Sum_probs=103.7
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCH---------------HHHHHHHHhCCCCcccceeEe-----cCCCCCCC--
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDR---------------RKMVEALERMGLLKYFQAIVS-----EEDGMESM-- 259 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~---------------~~~~~~L~~lgl~~~Fd~iv~-----~e~~~~~K-- 259 (361)
..++||+.++|+.|+++|++++|+||... ..+...++.+| .+|+.++. +++....|
T Consensus 26 ~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g--~~~~~~~~~~~~~~~~~~~~KP~ 103 (179)
T 3l8h_A 26 WIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMG--GVVDAIFMCPHGPDDGCACRKPL 103 (179)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTT--CCCCEEEEECCCTTSCCSSSTTS
T ss_pred ceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCC--CceeEEEEcCCCCCCCCCCCCCC
Confidence 37899999999999999999999999986 67788888888 34555542 35555455
Q ss_pred hHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEe-CCCCcccc----cCcceEeCChhhhHHHHHH
Q 018088 260 AHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLI-GAHRAYDL----VQADLAVANFNELSVINLR 328 (361)
Q Consensus 260 P~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~-g~~~~~~l----~~ad~vi~sl~EL~~~ll~ 328 (361)
|++|..+++++|++|++|++|||+.+|+.+|+++|+.+++|. |....... ..||++++++.||..++++
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~~~l~el~~~l~~ 177 (179)
T 3l8h_A 104 PGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVCEDLAAVAEQLLQ 177 (179)
T ss_dssp SHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEecCHHHHHHHHHh
Confidence 679999999999999999999999999999999999999994 43333332 5689999999999988765
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.85 E-value=6.7e-22 Score=175.22 Aligned_cols=120 Identities=13% Similarity=0.062 Sum_probs=101.7
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCC----------C--CCCChHHHHHHHHH
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEED----------G--MESMAHRFLSAAVK 269 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~----------~--~~~KP~~~~~~~~k 269 (361)
..+.||+.++|+.|+++|++++++||+....+...++.+|+..+|+.+++.++ . .++||++|..++++
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~~~~ 153 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVENDALNGLVTGHMMFSHSKGEMLLVLQRL 153 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEEESCCSTTHHHHHHHHHHHH
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccceeEEeCCEEEeeeccCCCCCCChHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999998874433 2 34567899999999
Q ss_pred cCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeC--ChhhhHH
Q 018088 270 LDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVA--NFNELSV 324 (361)
Q Consensus 270 lgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~--sl~EL~~ 324 (361)
+|++|++|++|||+.+|+.||+++|+.+++ .........||+++. ++.++..
T Consensus 154 ~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~---~~~~~l~~~ad~v~~~~dl~~~~~ 207 (217)
T 3m1y_A 154 LNISKTNTLVVGDGANDLSMFKHAHIKIAF---NAKEVLKQHATHCINEPDLALIKP 207 (217)
T ss_dssp HTCCSTTEEEEECSGGGHHHHTTCSEEEEE---SCCHHHHTTCSEEECSSBGGGGTT
T ss_pred cCCCHhHEEEEeCCHHHHHHHHHCCCeEEE---CccHHHHHhcceeecccCHHHHHH
Confidence 999999999999999999999999998766 223333457999987 4555543
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=99.85 E-value=4.2e-21 Score=169.55 Aligned_cols=175 Identities=15% Similarity=0.133 Sum_probs=121.5
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHH-HHHHHHHH-----
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESEL-DRLNSRLT----- 191 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~-~~l~~~~~----- 191 (361)
+++|+||+| ||+++...+. ...++++|.+.. ......+.+.+....+.. ...+.... ..+...+.
T Consensus 5 ~k~iiFDlDGTL~d~~~~~~---~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~ 76 (211)
T 2i6x_A 5 IRNIVFDLGGVLIHLNREES---IRRFKAIGVADI--EEMLDPYLQKGLFLDLES---GRKSEEEFRTELSRYIGKELTY 76 (211)
T ss_dssp CSEEEECSBTTTEEECHHHH---HHHHHHTTCTTH--HHHTCC---CCHHHHHHH---SSSCHHHHHHHHHHHHTSCCCH
T ss_pred ceEEEEeCCCeeEecchHHH---HHHHHHhCCchH--HHHHHHHhCchHHHHHHc---CCCCHHHHHHHHHHHhCCCCCH
Confidence 789999999 9999886543 556677776532 112122222222222111 01111111 11111110
Q ss_pred -HHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHh------CCCCcccceeEecCCCCCCC--hHH
Q 018088 192 -QLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALER------MGLLKYFQAIVSEEDGMESM--AHR 262 (361)
Q Consensus 192 -~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~------lgl~~~Fd~iv~~e~~~~~K--P~~ 262 (361)
............++||+.++|+.|++ |++++++||+....+...++. +|+..+|+.+++++++...| |++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~ 155 (211)
T 2i6x_A 77 QQVYDALLGFLEEISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDKVYASCQMGKYKPNEDI 155 (211)
T ss_dssp HHHHHHHGGGEEEECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGSSEEEEHHHHTCCTTSHHH
T ss_pred HHHHHHHHHhhcccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHcCeEEeecccCCCCCCHHH
Confidence 11111111123678999999999999 999999999999999999998 89999999999998766555 579
Q ss_pred HHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeC
Q 018088 263 FLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIG 302 (361)
Q Consensus 263 ~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g 302 (361)
|..+++++|++|++|++|||+.+|+.||+++|+.++++..
T Consensus 156 ~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~~~~~~ 195 (211)
T 2i6x_A 156 FLEMIADSGMKPEETLFIDDGPANVATAERLGFHTYCPDN 195 (211)
T ss_dssp HHHHHHHHCCCGGGEEEECSCHHHHHHHHHTTCEEECCCT
T ss_pred HHHHHHHhCCChHHeEEeCCCHHHHHHHHHcCCEEEEECC
Confidence 9999999999999999999999999999999999998743
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=99.85 E-value=3.5e-21 Score=169.95 Aligned_cols=185 Identities=10% Similarity=0.110 Sum_probs=133.2
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHHhCCCC-----CchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHHHHH
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEI-----PQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQ 192 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~-----~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~~ 192 (361)
+++|+||+| ||++ .+|.++++++|.+. ...... ..+.+...... .........+. +
T Consensus 2 ~k~viFD~DGTL~d------~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~-------~ 63 (206)
T 1rku_A 2 MEIACLDLEGVLVP------EIWIAFAEKTGIDALKATTRDIPDY-DVLMKQRLRIL----DEHGLKLGDIQ-------E 63 (206)
T ss_dssp CEEEEEESBTTTBC------CHHHHHHHHHTCGGGGCCTTTCCCH-HHHHHHHHHHH----HHTTCCHHHHH-------H
T ss_pred CcEEEEccCCcchh------hHHHHHHHHcCChHHHHHhcCcCCH-HHHHHHHHHHH----HHCCCCHHHHH-------H
Confidence 689999999 9999 37888999998763 111011 11222111111 11122222111 1
Q ss_pred HHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCccc-ceeEecCCCC-----CCChHHHHHH
Q 018088 193 LYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYF-QAIVSEEDGM-----ESMAHRFLSA 266 (361)
Q Consensus 193 ~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~F-d~iv~~e~~~-----~~KP~~~~~~ 266 (361)
.. ....++||+.++|+.|+++ ++++|+||+....+...++.+|+..+| +.++++++.. .+||+.+..+
T Consensus 64 ----~~-~~~~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~~~~~~p~p~~~~~~ 137 (206)
T 1rku_A 64 ----VI-ATLKPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQS 137 (206)
T ss_dssp ----HH-TTCCCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHH
T ss_pred ----HH-HhcCCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceecceeEEcCCceEEeeecCCCchHHHH
Confidence 11 3457899999999999999 999999999999999999999999999 5677766553 3788999999
Q ss_pred HHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceE-eCChhhhHHHHHHh
Q 018088 267 AVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLA-VANFNELSVINLRR 329 (361)
Q Consensus 267 ~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~v-i~sl~EL~~~ll~~ 329 (361)
++++++.|++|++|||+.+|+.+|+++|+.+++ ..........++++ ++++.++..++.+.
T Consensus 138 l~~l~~~~~~~~~iGD~~~Di~~a~~aG~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 199 (206)
T 1rku_A 138 VIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILF--HAPENVIREFPQFPAVHTYEDLKREFLKA 199 (206)
T ss_dssp HHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEE--SCCHHHHHHCTTSCEECSHHHHHHHHHHH
T ss_pred HHHHHhcCCEEEEEeCChhhHHHHHhcCccEEE--CCcHHHHHHHhhhccccchHHHHHHHHHH
Confidence 999999999999999999999999999998653 22111111246664 99999998876543
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.84 E-value=4.7e-22 Score=189.10 Aligned_cols=190 Identities=12% Similarity=0.053 Sum_probs=135.1
Q ss_pred CCceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcC-CHHHHHHHHHccC--CChHHHHHHHHHHHH
Q 018088 117 DEAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNA-GADHVLHKVLLWG--KEESELDRLNSRLTQ 192 (361)
Q Consensus 117 ~~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~-~~~~~l~~~l~~~--~~~~~~~~l~~~~~~ 192 (361)
..+++|+|||| ||++++ .+.++++.+|............+.+. .....+...+... .....+ .
T Consensus 106 ~~~kaviFDlDGTLid~~-----~~~~la~~~g~~~~~~~~~~~~~~g~~~~~~~l~~~~~~l~~~~~~~i--------~ 172 (317)
T 4eze_A 106 PANGIIAFDMDSTFIAEE-----GVDEIARELGMSTQITAITQQAMEGKLDFNASFTRRIGMLKGTPKAVL--------N 172 (317)
T ss_dssp CCSCEEEECTBTTTBSSC-----HHHHHHHHTTCHHHHHHHHHHHHTTSSCHHHHHHHHHHTTTTCBHHHH--------H
T ss_pred CCCCEEEEcCCCCccCCc-----cHHHHHHHhCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCCHHHH--------H
Confidence 45799999999 999998 45677777776443333333333333 2333333322211 111111 1
Q ss_pred HHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCC----------CC--CCCh
Q 018088 193 LYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEED----------GM--ESMA 260 (361)
Q Consensus 193 ~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~----------~~--~~KP 260 (361)
.+ .....++||+.++|+.|+++|++++|+||+....+...++.+|+..+|+.++..++ .. ++||
T Consensus 173 ~~----~~~~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~dg~~tg~i~~~~~~~kpkp 248 (317)
T 4eze_A 173 AV----CDRMTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDNVLTDNITLPIMNAANKK 248 (317)
T ss_dssp HH----HHTCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEETTEEEEEECSSCCCHHHHH
T ss_pred HH----HhCCEECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeCCeeeeeEecccCCCCCCH
Confidence 11 12347899999999999999999999999999999999999999999998775433 11 3467
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEe--CChhhhHHHH
Q 018088 261 HRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAV--ANFNELSVIN 326 (361)
Q Consensus 261 ~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi--~sl~EL~~~l 326 (361)
++|..+++++|++|++|++|||+.+|+.||++||+.+++ + ........+++++ .++.++..++
T Consensus 249 ~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~--~-~~~~~~~~a~~~i~~~~L~~ll~~L 313 (317)
T 4eze_A 249 QTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW--K-AKPVVREKIHHQINYHGFELLLFLI 313 (317)
T ss_dssp HHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE--S-CCHHHHHHCCEEESSSCGGGGGGGT
T ss_pred HHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEe--C-CCHHHHHhcCeeeCCCCHHHHHHHH
Confidence 899999999999999999999999999999999997766 2 2233334466555 4777776543
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=9.8e-21 Score=166.33 Aligned_cols=188 Identities=15% Similarity=0.157 Sum_probs=126.5
Q ss_pred CceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcC-CHHHHHHHHHc-cCCChHHHHHHHHHHHHHH
Q 018088 118 EAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNA-GADHVLHKVLL-WGKEESELDRLNSRLTQLY 194 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~-~~~~~l~~~l~-~~~~~~~~~~l~~~~~~~~ 194 (361)
++|+|+|||| ||+|++ .+..+++.+|..........+...+. .....+..... ..... .. ...+.+
T Consensus 4 ~~k~i~fDlDGTL~d~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~ 72 (211)
T 1l7m_A 4 KKKLILFDFDSTLVNNE-----TIDEIAREAGVEEEVKKITKEAMEGKLNFEQSLRKRVSLLKDLP--IE----KVEKAI 72 (211)
T ss_dssp CCEEEEEECCCCCBSSC-----HHHHHHHHTTCHHHHHHHHHHHHTTSSCHHHHHHHHHHTTTTCB--HH----HHHHHH
T ss_pred CCcEEEEeCCCCCCCcc-----HHHHHHHHhCcHHHHHHHHHHHHcCCCCHHHHHHHHHHHhcCCC--HH----HHHHHH
Confidence 4799999999 999996 34566666765321111121222221 22222221110 10000 00 011111
Q ss_pred HHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCC-----------C-CCCChHH
Q 018088 195 YDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEED-----------G-MESMAHR 262 (361)
Q Consensus 195 ~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~-----------~-~~~KP~~ 262 (361)
....+.|++.++|+.|+++|++++++|+.....+...++.+|+..+|+..+...+ . ...||+.
T Consensus 73 -----~~~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~ 147 (211)
T 1l7m_A 73 -----KRITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEI 147 (211)
T ss_dssp -----HTCCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHH
T ss_pred -----HhCCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEEeeeEEECCEEcCCcccCccCCccHHHH
Confidence 1246789999999999999999999999988888888999999877765443221 1 2357899
Q ss_pred HHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCC--hhhhHH
Q 018088 263 FLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVAN--FNELSV 324 (361)
Q Consensus 263 ~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~s--l~EL~~ 324 (361)
+..+++++|++|++|++|||+.||+.||++||+.++ +. ........||+++.+ +.||..
T Consensus 148 l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~-~~--~~~~~~~~a~~v~~~~~~~~l~~ 208 (211)
T 1l7m_A 148 LEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIA-FC--AKPILKEKADICIEKRDLREILK 208 (211)
T ss_dssp HHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEE-ES--CCHHHHTTCSEEECSSCGGGGGG
T ss_pred HHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEEE-EC--CCHHHHhhcceeecchhHHHHHH
Confidence 999999999999999999999999999999999744 32 222233569999998 888764
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.83 E-value=2.8e-21 Score=190.19 Aligned_cols=191 Identities=15% Similarity=0.084 Sum_probs=135.2
Q ss_pred CCCCceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcC-CHHHHHHHHHcc--CCChHHHHHHHHHH
Q 018088 115 KPDEAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNA-GADHVLHKVLLW--GKEESELDRLNSRL 190 (361)
Q Consensus 115 ~~~~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~-~~~~~l~~~l~~--~~~~~~~~~l~~~~ 190 (361)
..+++++|+|||| ||++++ .+..+++.+|............+.+. .....+...... +.....+..
T Consensus 181 ~~~~~k~viFD~DgTLi~~~-----~~~~la~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~----- 250 (415)
T 3p96_A 181 ERRAKRLIVFDVDSTLVQGE-----VIEMLAAKAGAEGQVAAITDAAMRGELDFAQSLQQRVATLAGLPATVIDE----- 250 (415)
T ss_dssp TTTCCCEEEECTBTTTBSSC-----HHHHHHHHTTCHHHHHHHHHHHHTTCSCHHHHHHHHHHTTTTCBTHHHHH-----
T ss_pred cccCCcEEEEcCcccCcCCc-----hHHHHHHHcCCcHHHHHHHHHHhcCCcCHHHHHHHHHHHhcCCCHHHHHH-----
Confidence 3456899999999 999998 56777777776443333333333333 233333333211 112211111
Q ss_pred HHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeE-------ecC---CC--CCC
Q 018088 191 TQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIV-------SEE---DG--MES 258 (361)
Q Consensus 191 ~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv-------~~e---~~--~~~ 258 (361)
+. ....++||+.++|+.|+++|++++|+||++...+...++.+|+..+|+..+ +++ +. .++
T Consensus 251 ---~~----~~~~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg~~tg~~~~~v~~~kp 323 (415)
T 3p96_A 251 ---VA----GQLELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDGTLTGRVVGPIIDRAG 323 (415)
T ss_dssp ---HH----HHCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETTEEEEEECSSCCCHHH
T ss_pred ---HH----HhCccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCCEEEeeEccCCCCCcc
Confidence 11 223789999999999999999999999999999999999999998876543 222 22 234
Q ss_pred ChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeC--ChhhhHHH
Q 018088 259 MAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVA--NFNELSVI 325 (361)
Q Consensus 259 KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~--sl~EL~~~ 325 (361)
||+.|..+++++|++|++|++|||+.+|+.||+++|+++++ ...+.....||+++. ++.++..+
T Consensus 324 k~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~---~~~~~~~~~ad~~i~~~~l~~ll~~ 389 (415)
T 3p96_A 324 KATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF---NAKPALREVADASLSHPYLDTVLFL 389 (415)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE---SCCHHHHHHCSEEECSSCTTHHHHH
T ss_pred hHHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE---CCCHHHHHhCCEEEccCCHHHHHHH
Confidence 67899999999999999999999999999999999998776 223333456888866 56665543
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=99.82 E-value=2.2e-20 Score=169.16 Aligned_cols=190 Identities=13% Similarity=0.055 Sum_probs=130.2
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhc-CCHHHHHHHHHccCCChHHHHHHHHHHHHHHHH
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILN-AGADHVLHKVLLWGKEESELDRLNSRLTQLYYD 196 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g-~~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~ 196 (361)
+++||||+| ||+++.. +..+++.++. ..........+.+ .+....+..++... .....+.+ .+.+.
T Consensus 6 ~k~viFD~DGTL~d~ds-----~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~- 73 (236)
T 2fea_A 6 KPFIICDFDGTITMNDN-----IINIMKTFAP-PEWMALKDGVLSKTLSIKEGVGRMFGLL-PSSLKEEI----TSFVL- 73 (236)
T ss_dssp CEEEEECCTTTTBSSCH-----HHHHHHHHSC-THHHHHHHHHHTTSSCHHHHHHHHHTTS-BGGGHHHH----HHHHH-
T ss_pred CcEEEEeCCCCCCccch-----HHHHHHHhch-hhHHHHHHHHHhCcCcHHHHHHHHHHhc-CCChHHHH----HHHHh-
Confidence 689999999 9997642 2233344442 1111111222333 34555666554332 11112222 11111
Q ss_pred hcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCC--------CCh--H-HHH-
Q 018088 197 NLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGME--------SMA--H-RFL- 264 (361)
Q Consensus 197 ~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~--------~KP--~-~~~- 264 (361)
....++||+.++|+.|+++|++++|+||+....+...++ |+..+ +.+++++.... +|| + ++.
T Consensus 74 ---~~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~~v~~~~~~~~~~~~~~~~~kp~p~~~~~~ 147 (236)
T 2fea_A 74 ---EDAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-DRIYCNHASFDNDYIHIDWPHSCKGTCSNQ 147 (236)
T ss_dssp ---HHCCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-GGEEEEEEECSSSBCEEECTTCCCTTCCSC
T ss_pred ---cCCCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-CeEEeeeeEEcCCceEEecCCCCccccccc
Confidence 234789999999999999999999999999999998888 87666 88888876543 566 4 343
Q ss_pred ------HHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccc--c-CcceEeCChhhhHHHHHHh
Q 018088 265 ------SAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDL--V-QADLAVANFNELSVINLRR 329 (361)
Q Consensus 265 ------~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l--~-~ad~vi~sl~EL~~~ll~~ 329 (361)
.++++++++|++|+||||+.+|+.+|+++|+.++. ++. ...+ . .+++++.++.||..++.+.
T Consensus 148 ~~~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~-~~~--~~~~~~~~~~~~~~~~~~el~~~l~~~ 218 (236)
T 2fea_A 148 CGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFAR-DYL--LNECREQNLNHLPYQDFYEIRKEIENV 218 (236)
T ss_dssp CSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEEC-HHH--HHHHHHTTCCEECCSSHHHHHHHHHTS
T ss_pred cCCcHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeec-hHH--HHHHHHCCCCeeecCCHHHHHHHHHHh
Confidence 89999999999999999999999999999998763 221 1221 2 2899999999998876553
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.82 E-value=4.6e-22 Score=178.98 Aligned_cols=199 Identities=12% Similarity=0.088 Sum_probs=134.9
Q ss_pred ceEEEEece-eccccHHHHHHH--HHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCC--ChHHHHHHHHHHHHH
Q 018088 119 AYGLIFSWD-VVADTRALKLNA--WKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGK--EESELDRLNSRLTQL 193 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a--~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~--~~~~~~~l~~~~~~~ 193 (361)
+|+|+|||| ||+++...+..+ +.+.+++.|++.... ....|.....+...+...+. ......... .....
T Consensus 3 ~k~i~fDlDGTLl~~~~~~~~~~~~~~~l~~~g~~~~~~----t~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~ 77 (250)
T 2c4n_A 3 IKNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLL----TNYPSQTGQDLANRFATAGVDVPDSVFYTSA-MATAD 77 (250)
T ss_dssp CCEEEEECBTTTEETTEECTTHHHHHHHHHHTTCCEEEE----ESCCSCCHHHHHHHHHHTTCCCCGGGEEEHH-HHHHH
T ss_pred ccEEEEcCcceEEeCCEeCcCHHHHHHHHHHcCCcEEEE----ECCCCCCHHHHHHHHHHcCCCCCHHHeEcHH-HHHHH
Confidence 789999999 999987655555 556677788765321 01124455555554433322 121110000 11122
Q ss_pred HHHhcccCCCCCccHHHHHHHHhhCCCcEE---------------------------------EEeCCCHHHHHHHHHhC
Q 018088 194 YYDNLLSVTEPMEGLQEWLDAVSSARIPCA---------------------------------VVSGLDRRKMVEALERM 240 (361)
Q Consensus 194 ~~~~l~~~~~~~pgv~elL~~L~~~Gi~va---------------------------------ivSn~~~~~~~~~L~~l 240 (361)
+.+.......+.||+.++++.|++.|++++ ++||.. ......++.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~t~~~-~~~~~~~~~~ 156 (250)
T 2c4n_A 78 FLRRQEGKKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETRSYNWDMMHKAAYFVANGARFIATNPD-THGRGFYPAC 156 (250)
T ss_dssp HHHTSSCCEEEEECCTHHHHHHHHTTCEECSSSCSEEEECCCTTCCHHHHHHHHHHHHTTCEEEESCCC-SBSSTTCBCH
T ss_pred HHHhcCCCEEEEEcCHHHHHHHHHcCCcccCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEEEECCC-CCCCCeeecc
Confidence 223333344678999999999999999999 888876 3333333333
Q ss_pred C-CCcccceeEecCCC--CCCChHHHHHHHHHcCCCCCcEEEEcCC-hHHHHHHHHcCCeEEEE-eCCCCcccc----cC
Q 018088 241 G-LLKYFQAIVSEEDG--MESMAHRFLSAAVKLDRKPSKCVVFEDD-PRAITAAHNCTMMAVGL-IGAHRAYDL----VQ 311 (361)
Q Consensus 241 g-l~~~Fd~iv~~e~~--~~~KP~~~~~~~~klgi~p~~~v~IGDs-~~Di~aA~~aG~~~v~V-~g~~~~~~l----~~ 311 (361)
| +..+|+.+.+.+.. .++||+.|..+++++|++|++|++|||+ .||++||+++|+.+++| .|.+...++ ..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~ 236 (250)
T 2c4n_A 157 GALCAGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFR 236 (250)
T ss_dssp HHHHHHHHHHHCCCCEECSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSC
T ss_pred hHHHHHHHHHhCCCceEeCCCCHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCC
Confidence 4 44556666666654 4567899999999999999999999999 69999999999999999 444443444 36
Q ss_pred cceEeCChhhhH
Q 018088 312 ADLAVANFNELS 323 (361)
Q Consensus 312 ad~vi~sl~EL~ 323 (361)
||++++++.||.
T Consensus 237 ~~~v~~~~~el~ 248 (250)
T 2c4n_A 237 PSWIYPSVAEID 248 (250)
T ss_dssp CSEEESSGGGCC
T ss_pred CCEEECCHHHhh
Confidence 999999999874
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.5e-19 Score=161.52 Aligned_cols=125 Identities=15% Similarity=0.071 Sum_probs=103.3
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCC---------------HHHHHHHHHhCCCCcccceeEec------------CC
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLD---------------RRKMVEALERMGLLKYFQAIVSE------------ED 254 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~---------------~~~~~~~L~~lgl~~~Fd~iv~~------------e~ 254 (361)
..++||+.++|+.|+++|++++|+||.. ...+...++.+|+. |+.++.+ ++
T Consensus 49 ~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--f~~~~~~~~~~~~~~~~~~~~ 126 (211)
T 2gmw_A 49 FEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD--LDGIYYCPHHPQGSVEEFRQV 126 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCBTTCSSGGGBSC
T ss_pred CcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc--eEEEEECCcCCCCcccccCcc
Confidence 3789999999999999999999999998 47888999999996 7776543 23
Q ss_pred CCCC--ChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeE-EEEe-CCCCcccc-cCcceEeCChhhhHHHHHH
Q 018088 255 GMES--MAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMA-VGLI-GAHRAYDL-VQADLAVANFNELSVINLR 328 (361)
Q Consensus 255 ~~~~--KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~-v~V~-g~~~~~~l-~~ad~vi~sl~EL~~~ll~ 328 (361)
...+ +|++|..+++++|++|++|+||||+.+|+.+|+++|+.+ ++|. +....... ..||++++++.||..++.+
T Consensus 127 ~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~~l~el~~~l~~ 205 (211)
T 2gmw_A 127 CDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQAIKK 205 (211)
T ss_dssp CSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHHHHC
T ss_pred CcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeCCHHHHHHHHHh
Confidence 3334 567999999999999999999999999999999999999 9984 33222222 3599999999999887543
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=99.81 E-value=4e-20 Score=165.97 Aligned_cols=174 Identities=13% Similarity=0.092 Sum_probs=118.1
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHHhCCC-CCch------HHHHHHHhcC-CHHHHHHHHH--ccCCChHHHHHHH
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFEEGKE-IPQE------GDVLRQILNA-GADHVLHKVL--LWGKEESELDRLN 187 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~-~~~~------~~~~~~~~g~-~~~~~l~~~l--~~~~~~~~~~~l~ 187 (361)
+++||||+| ||+|++..+ .|...+...+.. .... ........+. .......... ..+.....+....
T Consensus 4 ~k~viFDlDGTL~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (232)
T 3fvv_A 4 RRLALFDLDHTLLPLDSDY--QWADFLARTGRAGDPAEARRRNDDLMERYNRGELTAEQAAEFMLGLLAAHSPVELAAWH 81 (232)
T ss_dssp CEEEEECCBTTTBSSCHHH--HHHHHHHHTTSSSSHHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHTSCHHHHHHHH
T ss_pred CcEEEEeCCCCCcCCchHH--HHHHHHHHcCCCCccHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 689999999 999998653 566666666643 1110 0111111122 2222222211 1123333333322
Q ss_pred HHHHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCC------------C
Q 018088 188 SRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEED------------G 255 (361)
Q Consensus 188 ~~~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~------------~ 255 (361)
.+.+.+.+.. .++||+.++|+.|+++|++++|+||+....+...++.+|+..+|...+..++ .
T Consensus 82 ---~~~~~~~~~~--~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~ 156 (232)
T 3fvv_A 82 ---EEFMRDVIRP--SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDGRYTGRIEGTPSF 156 (232)
T ss_dssp ---HHHHHHTTGG--GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEEEECEEEEETTEEEEEEESSCSS
T ss_pred ---HHHHHHhhhh--hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEcceEEECCEEeeeecCCCCc
Confidence 2333333221 5799999999999999999999999999999999999999877755433211 1
Q ss_pred CCCChHHHHHHHHHcC---CCCCcEEEEcCChHHHHHHHHcCCeEEE
Q 018088 256 MESMAHRFLSAAVKLD---RKPSKCVVFEDDPRAITAAHNCTMMAVG 299 (361)
Q Consensus 256 ~~~KP~~~~~~~~klg---i~p~~~v~IGDs~~Di~aA~~aG~~~v~ 299 (361)
...|++.+..+++++| ++|++|++|||+.+|+.|+++||+.++.
T Consensus 157 ~~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~ 203 (232)
T 3fvv_A 157 REGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAA 203 (232)
T ss_dssp THHHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEE
T ss_pred chHHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEE
Confidence 2346788999999999 9999999999999999999999988765
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.4e-20 Score=165.29 Aligned_cols=101 Identities=14% Similarity=0.069 Sum_probs=90.4
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHh-CCCCcccceeEecCCCCCCC--hHHHHHHHHHcCCCCCcEE
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALER-MGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDRKPSKCV 278 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~-lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi~p~~~v 278 (361)
..++||+.++|+.|+++|++++++||++...+...++. +|+..+|+.++++++....| |++|..+++++|++|++|+
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 169 (206)
T 2b0c_A 90 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTV 169 (206)
T ss_dssp EEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred cccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhheeeEEEecccCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence 36799999999999999999999999987777776766 68888999999998766666 5699999999999999999
Q ss_pred EEcCChHHHHHHHHcCCeEEEEeC
Q 018088 279 VFEDDPRAITAAHNCTMMAVGLIG 302 (361)
Q Consensus 279 ~IGDs~~Di~aA~~aG~~~v~V~g 302 (361)
+|||+.+|+.+|+++|+.++++..
T Consensus 170 ~vgD~~~Di~~a~~aG~~~~~~~~ 193 (206)
T 2b0c_A 170 FFDDNADNIEGANQLGITSILVKD 193 (206)
T ss_dssp EEESCHHHHHHHHTTTCEEEECCS
T ss_pred EeCCCHHHHHHHHHcCCeEEEecC
Confidence 999999999999999999999743
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=7.2e-20 Score=182.74 Aligned_cols=178 Identities=12% Similarity=0.097 Sum_probs=119.3
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHH--------
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSR-------- 189 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~-------- 189 (361)
+|+|+||+| ||++.. ...++..++..+++...... ..+........+...................
T Consensus 3 ~k~viFD~DGTL~~~~--~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (555)
T 3i28_A 3 LRAAVFDLDGVLALPA--VFGVLGRTEEALALPRGLLN---DAFQKGGPEGATTRLMKGEITLSQWIPLMEENCRKCSET 77 (555)
T ss_dssp -CEEEECTBTTTEESC--THHHHHHHHHHTTCCTTHHH---HHHHTTGGGSHHHHHHTTSSCHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEecCCeeecch--hHHHHHHHHHHhCCcHHHHH---HHHhccCcccchhHHhcCCCCHHHHHHHHHHHHHHhhhc
Confidence 789999999 998776 33566677777776653321 2222211111222222222222222211111
Q ss_pred ----------HHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCC--CHHHHHHHHHhC--CCCcccceeEecCCC
Q 018088 190 ----------LTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGL--DRRKMVEALERM--GLLKYFQAIVSEEDG 255 (361)
Q Consensus 190 ----------~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~--~~~~~~~~L~~l--gl~~~Fd~iv~~e~~ 255 (361)
+.+.+.+. .....++||+.++|+.|+++|++++|+||+ ........+... |+..+||.+++++++
T Consensus 78 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~~~fd~i~~~~~~ 156 (555)
T 3i28_A 78 AKVCLPKNFSIKEIFDKA-ISARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQV 156 (555)
T ss_dssp TTCCCCTTCCHHHHHHHH-HHHCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHH
T ss_pred cCCCCCccccHHHHHHHh-HhhcCcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhhhhhhheeEEEecccc
Confidence 11222222 123478999999999999999999999998 222222233333 778899999999998
Q ss_pred CCCC--hHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeC
Q 018088 256 MESM--AHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIG 302 (361)
Q Consensus 256 ~~~K--P~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g 302 (361)
...| |++|+.+++++|++|++|++|||+.+|+.+|+++|+.++++..
T Consensus 157 ~~~KP~p~~~~~~~~~lg~~p~~~~~v~D~~~di~~a~~aG~~~~~~~~ 205 (555)
T 3i28_A 157 GMVKPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQD 205 (555)
T ss_dssp TCCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEECSS
T ss_pred CCCCCCHHHHHHHHHHcCCChhHEEEECCcHHHHHHHHHcCCEEEEECC
Confidence 7777 5699999999999999999999999999999999999999743
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.1e-19 Score=160.06 Aligned_cols=123 Identities=9% Similarity=0.064 Sum_probs=95.7
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCC--cccce-eEe-cCCC----CCCCh--H-HHHHHHHHcC
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLL--KYFQA-IVS-EEDG----MESMA--H-RFLSAAVKLD 271 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~--~~Fd~-iv~-~e~~----~~~KP--~-~~~~~~~klg 271 (361)
.+.||+.++|+.|+++|++++++||+....+...++.+|+. .+|.. ++. .+.. ..+|| . .+..+++.+|
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 161 (219)
T 3kd3_A 82 LLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGSFKELDNSNGACDSKLSAFDKAKG 161 (219)
T ss_dssp TBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSBEEEEECTTSTTTCHHHHHHHHGG
T ss_pred cCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCceeccCCCCCCcccHHHHHHHHhC
Confidence 57899999999999999999999999999999999999994 45653 222 2221 23343 3 5566667779
Q ss_pred CCCCcEEEEcCChHHHHHHHHcCCeEEEE-eCCCCccc--ccCcceEeCChhhhHHHH
Q 018088 272 RKPSKCVVFEDDPRAITAAHNCTMMAVGL-IGAHRAYD--LVQADLAVANFNELSVIN 326 (361)
Q Consensus 272 i~p~~~v~IGDs~~Di~aA~~aG~~~v~V-~g~~~~~~--l~~ad~vi~sl~EL~~~l 326 (361)
++|++|++|||+.+|+.|+ ++|+.++++ .+.+.... ...||++++++.||..++
T Consensus 162 ~~~~~~~~vGD~~~Di~~~-~~G~~~~~v~~~~~~~~~~~~~~ad~v~~~~~el~~~l 218 (219)
T 3kd3_A 162 LIDGEVIAIGDGYTDYQLY-EKGYATKFIAYMEHIEREKVINLSKYVARNVAELASLI 218 (219)
T ss_dssp GCCSEEEEEESSHHHHHHH-HHTSCSEEEEECSSCCCHHHHHHCSEEESSHHHHHHHH
T ss_pred CCCCCEEEEECCHhHHHHH-hCCCCcEEEeccCccccHHHHhhcceeeCCHHHHHHhh
Confidence 9999999999999999999 689987776 33333322 246999999999998765
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=99.79 E-value=2.1e-19 Score=156.59 Aligned_cols=188 Identities=13% Similarity=0.092 Sum_probs=125.6
Q ss_pred cCCCCceEEE-Eece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcC-CHHHHHHHHHcc--CCChHHHHHHHH
Q 018088 114 MKPDEAYGLI-FSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNA-GADHVLHKVLLW--GKEESELDRLNS 188 (361)
Q Consensus 114 m~~~~~k~VI-FDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~-~~~~~l~~~l~~--~~~~~~~~~l~~ 188 (361)
|.+..++.++ ||+| ||++++ +|..+++.+|.. ...........+. .....+...... +...
T Consensus 3 m~~~~mk~ivifDlDGTL~d~~-----~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 68 (201)
T 4ap9_A 3 MDPQFMKKVAVIDIEGTLTDFE-----FWREMARITGKR-EIEELLEKGLSGEVEWLDSLLKRVGLIRGIDE-------- 68 (201)
T ss_dssp EECGGGSCEEEEECBTTTBCCC-----HHHHHHHHHCCH-HHHHHHHHHHHTSSCHHHHHHHHHHHTTTCBH--------
T ss_pred CChHhcceeEEecccCCCcchH-----HHHHHHHHhChH-HHHHHHHHHhcCCCCHHHHHHHHHHHhcCCCH--------
Confidence 4444456666 9999 999988 788888888861 1111111111222 222222211110 0010
Q ss_pred HHHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCC-CC--hHHHHH
Q 018088 189 RLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGME-SM--AHRFLS 265 (361)
Q Consensus 189 ~~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~-~K--P~~~~~ 265 (361)
+.+ ........+.||+.++|+.|+++|++++++||+....+... +.+|+..+++.++..+.... ++ |.....
T Consensus 69 ---~~~-~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 143 (201)
T 4ap9_A 69 ---GTF-LRTREKVNVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFMANRAIFEDGKFQGIRLRFRDKGE 143 (201)
T ss_dssp ---HHH-HHGGGGCCCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEEEEEEEEETTEEEEEECCSSCHHH
T ss_pred ---HHH-HHHHHhCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhheeeEEeeCCceECCcCCccCHHH
Confidence 111 12224458899999999999999999999999988888888 89999888666665543211 22 334556
Q ss_pred HHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhhhHHHHHH
Q 018088 266 AAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNELSVINLR 328 (361)
Q Consensus 266 ~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~EL~~~ll~ 328 (361)
+++++ +|++|++|||+.+|+.||+++|++ +++..... .||+++.++.|+..++.+
T Consensus 144 ~l~~l--~~~~~i~iGD~~~Di~~~~~ag~~-v~~~~~~~-----~ad~v~~~~~el~~~l~~ 198 (201)
T 4ap9_A 144 FLKRF--RDGFILAMGDGYADAKMFERADMG-IAVGREIP-----GADLLVKDLKELVDFIKN 198 (201)
T ss_dssp HHGGG--TTSCEEEEECTTCCHHHHHHCSEE-EEESSCCT-----TCSEEESSHHHHHHHHHT
T ss_pred HHHhc--CcCcEEEEeCCHHHHHHHHhCCce-EEECCCCc-----cccEEEccHHHHHHHHHH
Confidence 66666 899999999999999999999998 44432222 899999999998887643
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=99.79 E-value=6.9e-21 Score=173.65 Aligned_cols=125 Identities=18% Similarity=0.145 Sum_probs=102.2
Q ss_pred CCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccc---eeEecCCCC--CCChHHHHHHHHHcCCCCCcEE
Q 018088 204 PMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQ---AIVSEEDGM--ESMAHRFLSAAVKLDRKPSKCV 278 (361)
Q Consensus 204 ~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd---~iv~~e~~~--~~KP~~~~~~~~klgi~p~~~v 278 (361)
++|++.++++.|+ .|+++ ++||.........+...|+..+|+ .+++++++. ++||++|..+++++|++|++|+
T Consensus 123 ~~~~~~~~l~~l~-~~~~~-i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~ 200 (259)
T 2ho4_A 123 HYQLLNQAFRLLL-DGAPL-IAIHKARYYKRKDGLALGPGPFVTALEYATDTKAMVVGKPEKTFFLEALRDADCAPEEAV 200 (259)
T ss_dssp BHHHHHHHHHHHH-TTCCE-EESCCCSEEEETTEEEECSHHHHHHHHHHHTCCCEECSTTSHHHHHHHGGGGTCCGGGEE
T ss_pred CHHHHHHHHHHHH-CCCEE-EEECCCCcCcccCCcccCCcHHHHHHHHHhCCCceEecCCCHHHHHHHHHHcCCChHHEE
Confidence 6889999999999 89999 999987666666666778888886 556666654 4567899999999999999999
Q ss_pred EEcCCh-HHHHHHHHcCCeEEEEe-CCCCccc----ccCcceEeCChhhhHHHHHHhh
Q 018088 279 VFEDDP-RAITAAHNCTMMAVGLI-GAHRAYD----LVQADLAVANFNELSVINLRRL 330 (361)
Q Consensus 279 ~IGDs~-~Di~aA~~aG~~~v~V~-g~~~~~~----l~~ad~vi~sl~EL~~~ll~~l 330 (361)
+|||+. +|+.||+++|+.+|+|. |.....+ ...+|++++++.|+..++.+.|
T Consensus 201 ~iGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~ 258 (259)
T 2ho4_A 201 MIGDDCRDDVDGAQNIGMLGILVKTGKYKAADEEKINPPPYLTCESFPHAVDHILQHL 258 (259)
T ss_dssp EEESCTTTTHHHHHHTTCEEEEESSTTCCTTGGGGSSSCCSEEESCHHHHHHHHHHHT
T ss_pred EECCCcHHHHHHHHHCCCcEEEECCCCCCcccccccCCCCCEEECCHHHHHHHHHHhh
Confidence 999998 99999999999999994 4333222 2469999999999998877655
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.78 E-value=9.5e-20 Score=174.04 Aligned_cols=194 Identities=13% Similarity=0.043 Sum_probs=133.4
Q ss_pred CceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcC-CHHHHHHHHHcc--CCChHHHHHHHHHHHHH
Q 018088 118 EAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNA-GADHVLHKVLLW--GKEESELDRLNSRLTQL 193 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~-~~~~~l~~~l~~--~~~~~~~~~l~~~~~~~ 193 (361)
..++|+||+| ||++.+ ++.++++..|............+.+. .....+...+.. .....
T Consensus 106 ~~~~viFD~DgTLi~~~-----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~------------ 168 (335)
T 3n28_A 106 KPGLIVLDMDSTAIQIE-----CIDEIAKLAGVGEEVAEVTERAMQGELDFEQSLRLRVSKLKDAPEQ------------ 168 (335)
T ss_dssp SCCEEEECSSCHHHHHH-----HHHHHHHHHTCHHHHHHHHHHHHTTSSCHHHHHHHHHHTTTTCBTT------------
T ss_pred CCCEEEEcCCCCCcChH-----HHHHHHHHcCCchHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCCHH------------
Confidence 4589999999 999955 67777777775432222222222222 222222222111 11111
Q ss_pred HHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecC----------CCC--CCChH
Q 018088 194 YYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEE----------DGM--ESMAH 261 (361)
Q Consensus 194 ~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e----------~~~--~~KP~ 261 (361)
..+.+....+++||+.++|+.|++.|++++++||+....+...++.+|+..+|+..+... ++. ++||+
T Consensus 169 ~~~~~~~~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~~~tg~~~~~~~~~kpk~~ 248 (335)
T 3n28_A 169 ILSQVRETLPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGKLTGQVLGEVVSAQTKAD 248 (335)
T ss_dssp HHHHHHTTCCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEESCCCCHHHHHH
T ss_pred HHHHHHHhCCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCCeeeeeecccccChhhhHH
Confidence 111112345789999999999999999999999999999999999999998887654321 222 34678
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEe--CChhhhHHHHHHhhH
Q 018088 262 RFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAV--ANFNELSVINLRRLF 331 (361)
Q Consensus 262 ~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi--~sl~EL~~~ll~~l~ 331 (361)
.|..+++++|++|++|++|||+.||+.||++||+++++ .........+++++ .++.++..++...+.
T Consensus 249 ~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~---~~~~~~~~~a~~v~~~~~l~~v~~~L~~~l~ 317 (335)
T 3n28_A 249 ILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY---HAKPKVEAKAQTAVRFAGLGGVVCILSAALV 317 (335)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE---SCCHHHHTTSSEEESSSCTHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe---CCCHHHHhhCCEEEecCCHHHHHHHHHhHHH
Confidence 99999999999999999999999999999999998776 23333334566665 466666666655543
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=99.78 E-value=1.5e-20 Score=165.94 Aligned_cols=179 Identities=16% Similarity=0.113 Sum_probs=131.0
Q ss_pred CceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHHHHHHHHH
Q 018088 118 EAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLYYD 196 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~ 196 (361)
++++|||||| ||+|++..+..+|.+++++++ ..+.+. +.+.+....+.. + .......+ .+.|.+
T Consensus 3 ~~k~viFDlDGTL~Ds~~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~~~-~----~~~~~~~~----~~~~~~ 67 (197)
T 1q92_A 3 RALRVLVDMDGVLADFEGGFLRKFRARFPDQP-FIALED-----RRGFWVSEQYGR-L----RPGLSEKA----ISIWES 67 (197)
T ss_dssp CCEEEEECSBTTTBCHHHHHHHHHHHHCTTSC-CCCGGG-----CCSSCHHHHHHH-H----STTHHHHH----HHHHTS
T ss_pred CceEEEEeCCCCCccCcHHHHHHHHHHHhcCC-CCCHHH-----hcCCcHHHHHHh-c----CHHHHHHH----HHHHHh
Confidence 3689999999 999999999999999988762 222221 223333343333 1 12222222 233333
Q ss_pred h-cccCCCCCccHHHHHHHHhhC-CCcEEEEeCCCHHHHHHHHHhCCCCc-ccceeEecCCCCCCChHHHHHHHHHcCCC
Q 018088 197 N-LLSVTEPMEGLQEWLDAVSSA-RIPCAVVSGLDRRKMVEALERMGLLK-YFQAIVSEEDGMESMAHRFLSAAVKLDRK 273 (361)
Q Consensus 197 ~-l~~~~~~~pgv~elL~~L~~~-Gi~vaivSn~~~~~~~~~L~~lgl~~-~Fd~iv~~e~~~~~KP~~~~~~~~klgi~ 273 (361)
. ......++||+.++|+.|+++ |++++|+||+....+...++.+|+.+ +|+ ..+++++|+.
T Consensus 68 ~~~~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~f~----------------~~~~~~l~~~ 131 (197)
T 1q92_A 68 KNFFFELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFG----------------PDFLEQIVLT 131 (197)
T ss_dssp TTTTTTCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHC----------------GGGGGGEEEC
T ss_pred hhhhhcCCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhchHHHhch----------------HHHHHHhccC
Confidence 2 233467899999999999999 99999999999888889999999988 886 5678899999
Q ss_pred CCcEEEEcCChHH----HHHHH-HcCCeEEEEeCCCCcccccCc-ceEeCCh-hhhHHHHH
Q 018088 274 PSKCVVFEDDPRA----ITAAH-NCTMMAVGLIGAHRAYDLVQA-DLAVANF-NELSVINL 327 (361)
Q Consensus 274 p~~~v~IGDs~~D----i~aA~-~aG~~~v~V~g~~~~~~l~~a-d~vi~sl-~EL~~~ll 327 (361)
|++|++|||+..| +.+|+ +||+.+|++...+.......+ ...+.++ +++..++.
T Consensus 132 ~~~~~~vgDs~~dD~~~~~~a~~~aG~~~i~~~~~~~~~~~~~~~~~~v~~~~~~l~~~l~ 192 (197)
T 1q92_A 132 RDKTVVSADLLIDDRPDITGAEPTPSWEHVLFTACHNQHLQLQPPRRRLHSWADDWKAILD 192 (197)
T ss_dssp SCSTTSCCSEEEESCSCCCCSCSSCSSEEEEECCTTTTTCCCCTTCEEECCTTSCHHHHHH
T ss_pred CccEEEECcccccCCchhhhcccCCCceEEEecCcccccccccccchhhhhHHHHHHHHhc
Confidence 9999999999999 99999 999999999554433222233 4579999 47776654
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=1e-20 Score=166.47 Aligned_cols=177 Identities=11% Similarity=0.063 Sum_probs=127.2
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHHHHHHHHHh
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLYYDN 197 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~~ 197 (361)
.++|+|||| ||+|++..+..+|.++++ |++....+.. ........+..++ . .....+.+.|.+.
T Consensus 2 ~k~viFDlDGTL~Ds~~~~~~~~~~~~~--g~~~~~~~~~----~~~~~~~~~~~~~----~-----~~~~~~~~~~~~~ 66 (193)
T 2i7d_A 2 SVRVLVDMDGVLADFEAGLLRGFRRRFP--EEPHVPLEQR----RGFLAREQYRALR----P-----DLADKVASVYEAP 66 (193)
T ss_dssp CEEEEECSBTTTBCHHHHHHHHHHHHST--TSCCCCGGGC----CSSCHHHHHHHHC----T-----THHHHHHHHHTST
T ss_pred CcEEEEECCCcCccchhHHHHHHHHHhc--CCCCCCHHHH----HHhhHHHHHHHHh----H-----HHHHHHHHHHHhc
Confidence 479999999 999999999999998887 7652211111 1111222233221 1 1123334444443
Q ss_pred -cccCCCCCccHHHHHHHHhhC-CCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCC
Q 018088 198 -LLSVTEPMEGLQEWLDAVSSA-RIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPS 275 (361)
Q Consensus 198 -l~~~~~~~pgv~elL~~L~~~-Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~ 275 (361)
......++||+.++|+.|+++ |++++|+||+....+...++.+|+ |+.+++++ +++++|++|+
T Consensus 67 ~~~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl---f~~i~~~~------------~~~~~~~~~~ 131 (193)
T 2i7d_A 67 GFFLDLEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW---VEQHLGPQ------------FVERIILTRD 131 (193)
T ss_dssp TTTTTCCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH---HHHHHCHH------------HHTTEEECSC
T ss_pred CccccCccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc---hhhhcCHH------------HHHHcCCCcc
Confidence 233557899999999999999 999999999999999999999988 88777652 7899999999
Q ss_pred cEEEEcCChHH----HHHHH-HcCCeEEEEeCCCCcccccCcc-eEeCCh-hhhHHH
Q 018088 276 KCVVFEDDPRA----ITAAH-NCTMMAVGLIGAHRAYDLVQAD-LAVANF-NELSVI 325 (361)
Q Consensus 276 ~~v~IGDs~~D----i~aA~-~aG~~~v~V~g~~~~~~l~~ad-~vi~sl-~EL~~~ 325 (361)
+|++|||+.+| +.+|+ ++|+.+|++...+.......++ ..+.++ +++..+
T Consensus 132 ~~~~vgDs~~dD~~~i~~A~~~aG~~~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 188 (193)
T 2i7d_A 132 KTVVLGDLLIDDKDTVRGQEETPSWEHILFTCCHNRHLVLPPTRRRLLSWSDNWREI 188 (193)
T ss_dssp GGGBCCSEEEESSSCCCSSCSSCSSEEEEECCGGGTTCCCCTTSCEECSTTSCHHHH
T ss_pred cEEEECCchhhCcHHHhhcccccccceEEEEeccCcccccccchHHHhhHHHHHHHH
Confidence 99999999999 99999 9999999995443322212234 479999 555544
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=99.77 E-value=8.4e-20 Score=177.41 Aligned_cols=128 Identities=18% Similarity=0.298 Sum_probs=111.1
Q ss_pred CCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccc--eeEecCCC-------------CCCChHHHHH
Q 018088 201 VTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQ--AIVSEEDG-------------MESMAHRFLS 265 (361)
Q Consensus 201 ~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd--~iv~~e~~-------------~~~KP~~~~~ 265 (361)
...++||+.++|+.|+++|++++|+||+....+...++.+|+..+|+ .+++++++ .+++|++|..
T Consensus 213 ~~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~~~~~~~~kp~~KP~P~~~~~ 292 (384)
T 1qyi_A 213 ILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIA 292 (384)
T ss_dssp BSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHH
T ss_pred CCCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcCCCEEEecccccccccccccccCCCCCCHHHHHH
Confidence 34789999999999999999999999999999999999999999999 89998774 3455789999
Q ss_pred HHHHcC--------------CCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCC----cccc--cCcceEeCChhhhHHH
Q 018088 266 AAVKLD--------------RKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHR----AYDL--VQADLAVANFNELSVI 325 (361)
Q Consensus 266 ~~~klg--------------i~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~----~~~l--~~ad~vi~sl~EL~~~ 325 (361)
+++++| +.|++|+||||+.+|+.+|++|||.+|+|..... ...+ .+||++++++.||..+
T Consensus 293 a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~~g~~~~~~~~~l~~~~ad~vi~sl~eL~~~ 372 (384)
T 1qyi_A 293 ALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGELRGV 372 (384)
T ss_dssp HHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESSGGGHHHH
T ss_pred HHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEECCCccccccHHHHhhcCCCEEECCHHHHHHH
Confidence 999999 8999999999999999999999999999943321 2232 3699999999999887
Q ss_pred HHH
Q 018088 326 NLR 328 (361)
Q Consensus 326 ll~ 328 (361)
+..
T Consensus 373 l~~ 375 (384)
T 1qyi_A 373 LDN 375 (384)
T ss_dssp HSC
T ss_pred HHH
Confidence 543
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=99.75 E-value=3.3e-18 Score=149.62 Aligned_cols=99 Identities=19% Similarity=0.191 Sum_probs=90.7
Q ss_pred CCCCCccHHHHHHHHhhCCCcEEEEeCCC-HHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEE
Q 018088 201 VTEPMEGLQEWLDAVSSARIPCAVVSGLD-RRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVV 279 (361)
Q Consensus 201 ~~~~~pgv~elL~~L~~~Gi~vaivSn~~-~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~ 279 (361)
...+.||+.++|+.|+++|++++|+||.. ...+...++.+|+..+|+.++... .+||+.|..+++++|++|++|++
T Consensus 66 ~~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~f~~~~~~~---~~k~~~~~~~~~~~~~~~~~~~~ 142 (187)
T 2wm8_A 66 DVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFVHREIYP---GSKITHFERLQQKTGIPFSQMIF 142 (187)
T ss_dssp EECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTTEEEEEESS---SCHHHHHHHHHHHHCCCGGGEEE
T ss_pred ccCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhhcceeEEEe---CchHHHHHHHHHHcCCChHHEEE
Confidence 34789999999999999999999999998 799999999999999999875543 46899999999999999999999
Q ss_pred EcCChHHHHHHHHcCCeEEEEeC
Q 018088 280 FEDDPRAITAAHNCTMMAVGLIG 302 (361)
Q Consensus 280 IGDs~~Di~aA~~aG~~~v~V~g 302 (361)
|||+.+|+.+|+++|+.+|+|..
T Consensus 143 igD~~~Di~~a~~aG~~~i~v~~ 165 (187)
T 2wm8_A 143 FDDERRNIVDVSKLGVTCIHIQN 165 (187)
T ss_dssp EESCHHHHHHHHTTTCEEEECSS
T ss_pred EeCCccChHHHHHcCCEEEEECC
Confidence 99999999999999999999844
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.75 E-value=5.7e-19 Score=165.10 Aligned_cols=115 Identities=10% Similarity=0.130 Sum_probs=96.5
Q ss_pred CCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEE
Q 018088 201 VTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVF 280 (361)
Q Consensus 201 ~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~I 280 (361)
...++||+.++|+.|+++|++++++||.....+...++.+|+..+|+.++ +..| ..++++++.. ++|+||
T Consensus 161 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~-----~~~K----~~~~~~l~~~-~~~~~v 230 (287)
T 3a1c_A 161 SDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVL-----PHQK----SEEVKKLQAK-EVVAFV 230 (287)
T ss_dssp ECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCC-----TTCH----HHHHHHHTTT-CCEEEE
T ss_pred ccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCceeeeecC-----hHHH----HHHHHHHhcC-CeEEEE
Confidence 34789999999999999999999999999999999999999998887664 2233 6788899999 999999
Q ss_pred cCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEe--CChhhhHHHHH
Q 018088 281 EDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAV--ANFNELSVINL 327 (361)
Q Consensus 281 GDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi--~sl~EL~~~ll 327 (361)
||+.+|+.+|++||+. +++ +.........+|+++ .++.++..++.
T Consensus 231 GDs~~Di~~a~~ag~~-v~~-~~~~~~~~~~ad~v~~~~~~~~l~~~l~ 277 (287)
T 3a1c_A 231 GDGINDAPALAQADLG-IAV-GSGSDVAVESGDIVLIRDDLRDVVAAIQ 277 (287)
T ss_dssp ECTTTCHHHHHHSSEE-EEE-CCCSCCSSCCSSEEESSSCTHHHHHHHH
T ss_pred ECCHHHHHHHHHCCee-EEe-CCCCHHHHhhCCEEEeCCCHHHHHHHHH
Confidence 9999999999999998 444 333333345799999 99999887643
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.7e-18 Score=142.29 Aligned_cols=98 Identities=12% Similarity=0.102 Sum_probs=89.8
Q ss_pred CCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcCCCCCcEEEEc
Q 018088 204 PMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDRKPSKCVVFE 281 (361)
Q Consensus 204 ~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi~p~~~v~IG 281 (361)
++||+.++|+.|+++|++++++||.+...+...++.+|+..+|+.++++++....| |+.|..+++++|++|++|++||
T Consensus 19 ~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vg 98 (137)
T 2pr7_A 19 DQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVVDKVLLSGELGVEKPEEAAFQAAADAIDLPMRDCVLVD 98 (137)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSSSEEEEHHHHSCCTTSHHHHHHHHHHTTCCGGGEEEEE
T ss_pred cCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhccEEEEeccCCCCCCCHHHHHHHHHHcCCCcccEEEEc
Confidence 36788899999999999999999999999999999999999999999998766555 5799999999999999999999
Q ss_pred CChHHHHHHHHcCCeEEEEe
Q 018088 282 DDPRAITAAHNCTMMAVGLI 301 (361)
Q Consensus 282 Ds~~Di~aA~~aG~~~v~V~ 301 (361)
|+.+|+.+|+++|+.++++.
T Consensus 99 D~~~di~~a~~~G~~~i~~~ 118 (137)
T 2pr7_A 99 DSILNVRGAVEAGLVGVYYQ 118 (137)
T ss_dssp SCHHHHHHHHHHTCEEEECS
T ss_pred CCHHHHHHHHHCCCEEEEeC
Confidence 99999999999999999863
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.73 E-value=2.3e-19 Score=164.82 Aligned_cols=120 Identities=9% Similarity=0.031 Sum_probs=94.4
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCHHH--HHH-HHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcCCCCCc
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDRRK--MVE-ALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDRKPSK 276 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~--~~~-~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi~p~~ 276 (361)
..++||+.++|+.|+ .|+++ ++||..... ... .++..++..+|+.++++++...+| |++|..+++++|++|++
T Consensus 125 ~~~~~~~~~~l~~l~-~g~~~-i~tn~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~ 202 (264)
T 1yv9_A 125 ELSYEKVVLATLAIQ-KGALF-IGTNPDKNIPTERGLLPGAGSVVTFVETATQTKPVYIGKPKAIIMERAIAHLGVEKEQ 202 (264)
T ss_dssp TCCHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHTCCCEECSTTSHHHHHHHHHHHCSCGGG
T ss_pred CcCHHHHHHHHHHHh-CCCEE-EEECCCCcccCCCCcccCCcHHHHHHHHHhCCCccccCCCCHHHHHHHHHHcCCCHHH
Confidence 457999999999997 88987 889986632 111 122334667888888887765556 56999999999999999
Q ss_pred EEEEcCC-hHHHHHHHHcCCeEEEE-eCCCCccccc----CcceEeCChhhhH
Q 018088 277 CVVFEDD-PRAITAAHNCTMMAVGL-IGAHRAYDLV----QADLAVANFNELS 323 (361)
Q Consensus 277 ~v~IGDs-~~Di~aA~~aG~~~v~V-~g~~~~~~l~----~ad~vi~sl~EL~ 323 (361)
|+||||+ .+|+.+|+++|+.+|+| +|.....++. .||++++++.|+.
T Consensus 203 ~~~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~~~~d~v~~~l~el~ 255 (264)
T 1yv9_A 203 VIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDSLDEWT 255 (264)
T ss_dssp EEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESSGGGCC
T ss_pred EEEECCCcHHHHHHHHHcCCcEEEECCCCCCHHHHHhcCCCCCEEEecHHHHh
Confidence 9999999 59999999999999999 4444443432 6999999999875
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=2.6e-19 Score=165.63 Aligned_cols=125 Identities=14% Similarity=0.183 Sum_probs=103.4
Q ss_pred HHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHc
Q 018088 191 TQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKL 270 (361)
Q Consensus 191 ~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~kl 270 (361)
...|...+.....++||+.++|+.|++.|++++++||.....+...++.+|+.++|+.++ |+.+..+++++
T Consensus 124 ~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~f~~~~---------p~~k~~~~~~l 194 (263)
T 2yj3_A 124 NGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQEYYSNLS---------PEDKVRIIEKL 194 (263)
Confidence 333444444445789999999999999999999999999999999999999999998775 66678899999
Q ss_pred CCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEe--CChhhhHHHH
Q 018088 271 DRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAV--ANFNELSVIN 326 (361)
Q Consensus 271 gi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi--~sl~EL~~~l 326 (361)
+..|++|+||||+.+|+.++++||+.+++ +.........||+++ +++.+|..++
T Consensus 195 ~~~~~~~~~VGD~~~D~~aa~~Agv~va~--g~~~~~~~~~ad~v~~~~~l~~l~~~l 250 (263)
T 2yj3_A 195 KQNGNKVLMIGDGVNDAAALALADVSVAM--GNGVDISKNVADIILVSNDIGTLLGLI 250 (263)
Confidence 99999999999999999999999987555 333333445689999 9999987653
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.9e-18 Score=147.33 Aligned_cols=108 Identities=13% Similarity=0.010 Sum_probs=91.5
Q ss_pred CccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcCCh
Q 018088 205 MEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDP 284 (361)
Q Consensus 205 ~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGDs~ 284 (361)
.|+..++|+.|+++|++++++||.+...+...++.+|+..+|+. .++||+.+..++++++++|++|++|||+.
T Consensus 38 ~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~~-------~kp~~~~~~~~~~~~~~~~~~~~~vGD~~ 110 (162)
T 2p9j_A 38 NVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEEIYTG-------SYKKLEIYEKIKEKYSLKDEEIGFIGDDV 110 (162)
T ss_dssp EHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCEEEEC-------C--CHHHHHHHHHHTTCCGGGEEEEECSG
T ss_pred cccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHhhccC-------CCCCHHHHHHHHHHcCCCHHHEEEECCCH
Confidence 56678999999999999999999999999999999999877754 46789999999999999999999999999
Q ss_pred HHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhh
Q 018088 285 RAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNE 321 (361)
Q Consensus 285 ~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~E 321 (361)
+|+.+|+++|+.+++.. ........||+++.++.+
T Consensus 111 ~Di~~a~~ag~~~~~~~--~~~~~~~~a~~v~~~~~~ 145 (162)
T 2p9j_A 111 VDIEVMKKVGFPVAVRN--AVEEVRKVAVYITQRNGG 145 (162)
T ss_dssp GGHHHHHHSSEEEECTT--SCHHHHHHCSEECSSCSS
T ss_pred HHHHHHHHCCCeEEecC--ccHHHHhhCCEEecCCCC
Confidence 99999999999866422 222233469999999876
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.72 E-value=1.1e-17 Score=146.97 Aligned_cols=108 Identities=12% Similarity=0.102 Sum_probs=92.9
Q ss_pred HHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHH
Q 018088 211 WLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAA 290 (361)
Q Consensus 211 lL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA 290 (361)
+|+.|+++|++++|+||.....+...++.+|+.++|+.+ .+||+.+..+++++|++|++|++|||+.+|+.++
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~~f~~~-------~~K~~~~~~~~~~~g~~~~~~~~vGD~~nDi~~~ 126 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEHLFQGR-------EDKLVVLDKLLAELQLGYEQVAYLGDDLPDLPVI 126 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSEEECSC-------SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHH
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHHHhcCc-------CChHHHHHHHHHHcCCChhHEEEECCCHHHHHHH
Confidence 889999999999999999999999999999998888765 6899999999999999999999999999999999
Q ss_pred HHcCCeEEEEeCCCCcccccCcceEeCC------hhhhHHHHH
Q 018088 291 HNCTMMAVGLIGAHRAYDLVQADLAVAN------FNELSVINL 327 (361)
Q Consensus 291 ~~aG~~~v~V~g~~~~~~l~~ad~vi~s------l~EL~~~ll 327 (361)
+++|+.++. +.........||+++.+ +.++...++
T Consensus 127 ~~ag~~~~~--~~~~~~~~~~ad~v~~~~~~~G~~~~l~~~l~ 167 (189)
T 3mn1_A 127 RRVGLGMAV--ANAASFVREHAHGITRAQGGEGAAREFCELIL 167 (189)
T ss_dssp HHSSEEEEC--TTSCHHHHHTSSEECSSCTTTTHHHHHHHHHH
T ss_pred HHCCCeEEe--CCccHHHHHhCCEEecCCCCCcHHHHHHHHHH
Confidence 999987554 33334444579999998 566655544
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.71 E-value=2.8e-19 Score=155.49 Aligned_cols=107 Identities=7% Similarity=0.027 Sum_probs=89.4
Q ss_pred HHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHH
Q 018088 211 WLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAA 290 (361)
Q Consensus 211 lL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA 290 (361)
+|+.|+++|++++|+||.....+...++.+|+. +|+ + .++||+.+..+++++|++|++|++|||+.||+.|+
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~-~~~----~---~~~k~~~l~~~~~~~~~~~~~~~~vGD~~nD~~~~ 118 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP-VLH----G---IDRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCF 118 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-EEE----S---CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHH
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-eEe----C---CCChHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHH
Confidence 899999999999999999999999999999997 433 2 27889999999999999999999999999999999
Q ss_pred HHcCCeEEEEeCCCCcccccCcceEeCC------hhhhHHHHH
Q 018088 291 HNCTMMAVGLIGAHRAYDLVQADLAVAN------FNELSVINL 327 (361)
Q Consensus 291 ~~aG~~~v~V~g~~~~~~l~~ad~vi~s------l~EL~~~ll 327 (361)
+++|+.+++ +.........||+++.+ +.++..+++
T Consensus 119 ~~ag~~v~~--~~~~~~~~~~ad~v~~~~~~~g~~~~l~~~l~ 159 (176)
T 3mmz_A 119 ALVGWPVAV--ASAHDVVRGAARAVTTVPGGDGAIREIASWIL 159 (176)
T ss_dssp HHSSEEEEC--TTCCHHHHHHSSEECSSCTTTTHHHHHHHHHH
T ss_pred HHCCCeEEC--CChhHHHHHhCCEEecCCCCCcHHHHHHHHHH
Confidence 999977554 33333344568999998 666665543
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=1.2e-18 Score=160.46 Aligned_cols=113 Identities=18% Similarity=0.214 Sum_probs=92.6
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcC
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFED 282 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGD 282 (361)
.++||+.++|+.|+++|++++++||.....+...++.+|+..+|+.+++.+ |........+.+ +|++|||
T Consensus 144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~f~~~~~~~-----k~~~~k~~~~~~-----~~~~vGD 213 (280)
T 3skx_A 144 RIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLDDYFAEVLPHE-----KAEKVKEVQQKY-----VTAMVGD 213 (280)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCCGGG-----HHHHHHHHHTTS-----CEEEEEC
T ss_pred CCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCChhHhHhcCHHH-----HHHHHHHHHhcC-----CEEEEeC
Confidence 578999999999999999999999999999999999999999999887664 333333344433 8999999
Q ss_pred ChHHHHHHHHcCCeEEEEeCCCCcccccCcceEe--CChhhhHHHHH
Q 018088 283 DPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAV--ANFNELSVINL 327 (361)
Q Consensus 283 s~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi--~sl~EL~~~ll 327 (361)
+.||+.|+++||+.+++ ++........+++++ .++.++..++.
T Consensus 214 ~~nDi~~~~~Ag~~va~--~~~~~~~~~~a~~~~~~~~~~~l~~~l~ 258 (280)
T 3skx_A 214 GVNDAPALAQADVGIAI--GAGTDVAVETADIVLVRNDPRDVAAIVE 258 (280)
T ss_dssp TTTTHHHHHHSSEEEEC--SCCSSSCCCSSSEECSSCCTHHHHHHHH
T ss_pred CchhHHHHHhCCceEEe--cCCcHHHHhhCCEEEeCCCHHHHHHHHH
Confidence 99999999999975444 555555566788888 89999987754
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.70 E-value=4.1e-18 Score=152.69 Aligned_cols=100 Identities=11% Similarity=0.149 Sum_probs=88.5
Q ss_pred HHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHH
Q 018088 211 WLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAA 290 (361)
Q Consensus 211 lL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA 290 (361)
+|+.|+++|++++|+|+.....+...++.+|+..+|+.+ ++||+.+..+++++|++|++|++|||+.+|+.++
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~~f~~~-------k~K~~~l~~~~~~lg~~~~~~~~vGDs~nDi~~~ 156 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITHLYQGQ-------SDKLVAYHELLATLQCQPEQVAYIGDDLIDWPVM 156 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCEEECSC-------SSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHH
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCchhhccc-------CChHHHHHHHHHHcCcCcceEEEEcCCHHHHHHH
Confidence 899999999999999999999999999999998888765 6889999999999999999999999999999999
Q ss_pred HHcCCeEEEEeCCCCcccccCcceEeCCh
Q 018088 291 HNCTMMAVGLIGAHRAYDLVQADLAVANF 319 (361)
Q Consensus 291 ~~aG~~~v~V~g~~~~~~l~~ad~vi~sl 319 (361)
++||+.++. +.........||+++.+.
T Consensus 157 ~~ag~~~a~--~~~~~~~~~~Ad~v~~~~ 183 (211)
T 3ij5_A 157 AQVGLSVAV--ADAHPLLLPKAHYVTRIK 183 (211)
T ss_dssp TTSSEEEEC--TTSCTTTGGGSSEECSSC
T ss_pred HHCCCEEEe--CCccHHHHhhCCEEEeCC
Confidence 999987654 333444445799999886
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=99.70 E-value=1.1e-17 Score=149.82 Aligned_cols=93 Identities=14% Similarity=0.076 Sum_probs=75.5
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecC---CCCCCC--hHHHHHHHHHcCCCCCcE
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEE---DGMESM--AHRFLSAAVKLDRKPSKC 277 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e---~~~~~K--P~~~~~~~~klgi~p~~~ 277 (361)
.+.||+.++|+.|+++|++++|+||.........++. +.++|+.++.+. .....| |+.|..+++++|+ |
T Consensus 88 ~~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~--l~~~f~~i~~~~~~~~~~~~KP~p~~~~~~~~~~g~----~ 161 (211)
T 2b82_A 88 IPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKT--LADNFHIPATNMNPVIFAGDKPGQNTKSQWLQDKNI----R 161 (211)
T ss_dssp EECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHH--HHHHTTCCTTTBCCCEECCCCTTCCCSHHHHHHTTE----E
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHH--HHHhcCccccccchhhhcCCCCCHHHHHHHHHHCCC----E
Confidence 4578999999999999999999999976666666665 556777653221 122344 6689999999998 9
Q ss_pred EEEcCChHHHHHHHHcCCeEEEEe
Q 018088 278 VVFEDDPRAITAAHNCTMMAVGLI 301 (361)
Q Consensus 278 v~IGDs~~Di~aA~~aG~~~v~V~ 301 (361)
+||||+.+|+.+|+++|+.+|+|.
T Consensus 162 l~VGDs~~Di~aA~~aG~~~i~v~ 185 (211)
T 2b82_A 162 IFYGDSDNDITAARDVGARGIRIL 185 (211)
T ss_dssp EEEESSHHHHHHHHHTTCEEEECC
T ss_pred EEEECCHHHHHHHHHCCCeEEEEe
Confidence 999999999999999999999984
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=1.6e-18 Score=159.60 Aligned_cols=122 Identities=11% Similarity=0.083 Sum_probs=93.6
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHH---HHHhCCCCcccceeEecCC-CC--CCChHHHHHHHHHcCCCCCc
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVE---ALERMGLLKYFQAIVSEED-GM--ESMAHRFLSAAVKLDRKPSK 276 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~---~L~~lgl~~~Fd~iv~~e~-~~--~~KP~~~~~~~~klgi~p~~ 276 (361)
.++|++.+.++.| ..|+++ ++||........ .++..++..+|+.+++.+. .. ++||+.|..+++++|++|++
T Consensus 137 ~~~~~~~~~l~~l-~~~~~~-i~tn~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~e 214 (271)
T 1vjr_A 137 LTYERLKKACILL-RKGKFY-IATHPDINCPSKEGPVPDAGSIMAAIEASTGRKPDLIAGKPNPLVVDVISEKFGVPKER 214 (271)
T ss_dssp CCHHHHHHHHHHH-TTTCEE-EESCCCSEECCTTSCEECHHHHHHHHHHHHSCCCSEECSTTSTHHHHHHHHHHTCCGGG
T ss_pred cCHHHHHHHHHHH-HCCCeE-EEECCCccccCCCCccccccHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHHhCCCCce
Confidence 5688999999999 788987 889875432221 1222345567777777666 43 55678999999999999999
Q ss_pred EEEEcCCh-HHHHHHHHcCCeEEEE-eCCCCcccc----cCcceEeCChhhhHHHH
Q 018088 277 CVVFEDDP-RAITAAHNCTMMAVGL-IGAHRAYDL----VQADLAVANFNELSVIN 326 (361)
Q Consensus 277 ~v~IGDs~-~Di~aA~~aG~~~v~V-~g~~~~~~l----~~ad~vi~sl~EL~~~l 326 (361)
|++|||++ ||+.||+++|+.+++| +|......+ ..||++++++.||..++
T Consensus 215 ~i~iGD~~~nDi~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~i~~l~el~~~l 270 (271)
T 1vjr_A 215 MAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAKAV 270 (271)
T ss_dssp EEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHHH
T ss_pred EEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHHh
Confidence 99999995 9999999999999999 444443333 26999999999998753
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=3.6e-17 Score=139.67 Aligned_cols=99 Identities=11% Similarity=0.082 Sum_probs=86.7
Q ss_pred HHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHH
Q 018088 211 WLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAA 290 (361)
Q Consensus 211 lL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA 290 (361)
.|+.|+++|++++++||.....+...++.+|+..+|+.+ ++||+.+..+++++|++|++|+||||+.+|+.+|
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~~~~~-------kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~ 111 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDYLFQGV-------VDKLSAAEELCNELGINLEQVAYIGDDLNDAKLL 111 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSEEECSC-------SCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHH
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEeeccc-------CChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHH
Confidence 789999999999999999999999999999998877653 6789999999999999999999999999999999
Q ss_pred HHcCCeEEEEeCCCCcccccCcceEeCC
Q 018088 291 HNCTMMAVGLIGAHRAYDLVQADLAVAN 318 (361)
Q Consensus 291 ~~aG~~~v~V~g~~~~~~l~~ad~vi~s 318 (361)
+++|+.++. +.........||+++.+
T Consensus 112 ~~ag~~~~~--~~~~~~~~~~ad~v~~~ 137 (164)
T 3e8m_A 112 KRVGIAGVP--ASAPFYIRRLSTIFLEK 137 (164)
T ss_dssp TTSSEEECC--TTSCHHHHTTCSSCCCC
T ss_pred HHCCCeEEc--CChHHHHHHhCcEEecc
Confidence 999997665 33333444568999987
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.68 E-value=4.8e-16 Score=134.73 Aligned_cols=166 Identities=13% Similarity=0.142 Sum_probs=111.5
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHHHHHHHH-H
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLYY-D 196 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~-~ 196 (361)
.++|||||| ||+|++..+..+|.+ .+|.+.+... +.|.+....+ + ..... +.+.+. .
T Consensus 4 ~~~viFD~DGtL~Ds~~~~~~~~~~---~~g~~~~~~~-----~~g~~~~~~~----~--~~~~~-------~~~~~~~~ 62 (180)
T 3bwv_A 4 RQRIAIDMDEVLADTLGAVVKAVNE---RADLNIKMES-----LNGKKLKHMI----P--EHEGL-------VMDILKEP 62 (180)
T ss_dssp CCEEEEETBTTTBCHHHHHHHHHHH---HSCCCCCGGG-----CTTCCC--------------CH-------HHHHHHST
T ss_pred ccEEEEeCCCcccccHHHHHHHHHH---HhCCCCCHHH-----HcCccHHHHC----C--chHHH-------HHHHHhCc
Confidence 479999999 999999998888876 5677654332 1233322211 1 01111 112211 2
Q ss_pred hcccCCCCCccHHHHHHHHhhCCCcEEEEeCC---CH--HHHHHHHHh-CCCCcccceeEecCCCCCCChHHHHHHHHHc
Q 018088 197 NLLSVTEPMEGLQEWLDAVSSARIPCAVVSGL---DR--RKMVEALER-MGLLKYFQAIVSEEDGMESMAHRFLSAAVKL 270 (361)
Q Consensus 197 ~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~---~~--~~~~~~L~~-lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~kl 270 (361)
......+++||+.++|+.|++. ++++|+||. .. ......+.. ++...+|+.++++++. ++
T Consensus 63 ~~~~~~~~~pg~~e~L~~L~~~-~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~~i~~~~~~-------------~l 128 (180)
T 3bwv_A 63 GFFRNLDVMPHAQEVVKQLNEH-YDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFVFCGRKN-------------II 128 (180)
T ss_dssp TGGGSCCBCTTHHHHHHHHTTT-SEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGGEEECSCGG-------------GB
T ss_pred chhccCCCCcCHHHHHHHHHhc-CCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcccEEEeCCcC-------------ee
Confidence 2334568899999999999985 999999998 32 222444554 6777888999988762 12
Q ss_pred CCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhhhHHHHHH
Q 018088 271 DRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNELSVINLR 328 (361)
Q Consensus 271 gi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~EL~~~ll~ 328 (361)
++|++|||+++|+. ++|| .+|+|....... ..++++++++.||..++.+
T Consensus 129 ----~~~l~ieDs~~~i~--~aaG-~~i~~~~~~~~~--~~~~~~i~~~~el~~~l~~ 177 (180)
T 3bwv_A 129 ----LADYLIDDNPKQLE--IFEG-KSIMFTASHNVY--EHRFERVSGWRDVKNYFNS 177 (180)
T ss_dssp ----CCSEEEESCHHHHH--HCSS-EEEEECCGGGTT--CCSSEEECSHHHHHHHHHH
T ss_pred ----cccEEecCCcchHH--HhCC-CeEEeCCCcccC--CCCceecCCHHHHHHHHHH
Confidence 77999999999985 5689 999985433221 4688999999999877543
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.68 E-value=6.8e-18 Score=153.99 Aligned_cols=73 Identities=26% Similarity=0.278 Sum_probs=60.8
Q ss_pred CCCChHHHHHHHHHcCCCCCcEEEEcCCh-HHHHHHHHcCCeEEEEeCC-CCccc-c---cCcceEeCChhhhHHHHHH
Q 018088 256 MESMAHRFLSAAVKLDRKPSKCVVFEDDP-RAITAAHNCTMMAVGLIGA-HRAYD-L---VQADLAVANFNELSVINLR 328 (361)
Q Consensus 256 ~~~KP~~~~~~~~klgi~p~~~v~IGDs~-~Di~aA~~aG~~~v~V~g~-~~~~~-l---~~ad~vi~sl~EL~~~ll~ 328 (361)
.++||+.|..+++++|++|++|++|||+. ||+.||+++|+.+++|... ..... . ..||++++++.|+..++.+
T Consensus 189 ~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~el~~~l~~ 267 (271)
T 2x4d_A 189 GKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRPSDEHHPEVKADGYVDNLAEAVDLLLQ 267 (271)
T ss_dssp STTCHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCGGGGGCSSCCCSEEESSHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHhCCCcceEEEECCCcHHHHHHHHHCCCcEEEEcCCCCCchhhcccCCCCCEEeCCHHHHHHHHHh
Confidence 35678999999999999999999999998 9999999999999999433 33222 2 3499999999999876544
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.68 E-value=1.1e-17 Score=148.00 Aligned_cols=100 Identities=13% Similarity=0.153 Sum_probs=86.5
Q ss_pred HHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHH
Q 018088 211 WLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAA 290 (361)
Q Consensus 211 lL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA 290 (361)
.|+.|+++|++++|+||.....+...++.+|+..+|+.+ ++||+.+..+++++|++|++|++|||+.||+.|+
T Consensus 60 ~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~~~~~~-------k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~~~ 132 (195)
T 3n07_A 60 GVKALMNAGIEIAIITGRRSQIVENRMKALGISLIYQGQ-------DDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVM 132 (195)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCEEECSC-------SSHHHHHHHHHHHHCCCGGGEEEEESSGGGHHHH
T ss_pred HHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcEEeeCC-------CCcHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHH
Confidence 488899999999999999999999999999998777643 6789999999999999999999999999999999
Q ss_pred HHcCCeEEEEeCCCCcccccCcceEeCCh
Q 018088 291 HNCTMMAVGLIGAHRAYDLVQADLAVANF 319 (361)
Q Consensus 291 ~~aG~~~v~V~g~~~~~~l~~ad~vi~sl 319 (361)
+++|+.+++ ++........||+++.+.
T Consensus 133 ~~ag~~va~--~na~~~~~~~ad~v~~~~ 159 (195)
T 3n07_A 133 EKVALRVCV--ADGHPLLAQRANYVTHIK 159 (195)
T ss_dssp TTSSEEEEC--TTSCHHHHHHCSEECSSC
T ss_pred HHCCCEEEE--CChHHHHHHhCCEEEcCC
Confidence 999988654 333334445699999874
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.67 E-value=1.9e-17 Score=145.84 Aligned_cols=100 Identities=13% Similarity=0.141 Sum_probs=86.9
Q ss_pred HHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHH
Q 018088 211 WLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAA 290 (361)
Q Consensus 211 lL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA 290 (361)
.|+.|+++|++++++||.+...+...++.+|+..+|+.+ ++||+.+..+++++|++|++|++|||+.+|+.++
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~~~~~~-------kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~ 126 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITHYYKGQ-------VDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLI 126 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCEEECSC-------SSCHHHHHHHHHHHTCCGGGEEEEECSGGGHHHH
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCccceeCC-------CChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHH
Confidence 478899999999999999999999999999998877755 7899999999999999999999999999999999
Q ss_pred HHcCCeEEEEeCCCCcccccCcceEeCCh
Q 018088 291 HNCTMMAVGLIGAHRAYDLVQADLAVANF 319 (361)
Q Consensus 291 ~~aG~~~v~V~g~~~~~~l~~ad~vi~sl 319 (361)
+++|+.++. +.........||+++.+.
T Consensus 127 ~~ag~~~~~--~~~~~~~~~~ad~v~~~~ 153 (191)
T 3n1u_A 127 QQVGLGVAV--SNAVPQVLEFADWRTERT 153 (191)
T ss_dssp HHSSEEEEC--TTCCHHHHHHSSEECSSC
T ss_pred HHCCCEEEe--CCccHHHHHhCCEEecCC
Confidence 999998643 333333445699999883
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=99.66 E-value=8.4e-17 Score=144.07 Aligned_cols=125 Identities=12% Similarity=0.126 Sum_probs=102.6
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCH---------------HHHHHHHHhCCCCcccceeE-ec-----------CC
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDR---------------RKMVEALERMGLLKYFQAIV-SE-----------ED 254 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~---------------~~~~~~L~~lgl~~~Fd~iv-~~-----------e~ 254 (361)
..++||+.++|+.|+++|++++++||+.. ..+...++.+|+. |+.++ +. ++
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--~~~~~~~~~~~~g~~~~~~~~ 132 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVF--VDMVLACAYHEAGVGPLAIPD 132 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCCTTCCSTTCCSS
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCc--eeeEEEeecCCCCceeecccC
Confidence 37899999999999999999999999987 6888899999984 66544 33 44
Q ss_pred CCCC--ChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeE-EEEeCCC-Cccc-ccCcceEeCChhhhHHHHHH
Q 018088 255 GMES--MAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMA-VGLIGAH-RAYD-LVQADLAVANFNELSVINLR 328 (361)
Q Consensus 255 ~~~~--KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~-v~V~g~~-~~~~-l~~ad~vi~sl~EL~~~ll~ 328 (361)
...+ +|++|..+++++|++|++|+||||+.+|+.+|+++|+.+ ++|.... .... ...+|+++.++.||..++.+
T Consensus 133 ~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~~~~i~~l~el~~~l~~ 211 (218)
T 2o2x_A 133 HPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLRDSSELGDLLAAIET 211 (218)
T ss_dssp CTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEETTEEEEEESSHHHHHHHHHHHHH
T ss_pred CccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCEeEEEecCCCCcccccCCCCEecccHHHHHHHHHH
Confidence 4444 467999999999999999999999999999999999999 9984332 2222 23689999999999887543
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=6.3e-17 Score=140.85 Aligned_cols=109 Identities=14% Similarity=0.113 Sum_probs=91.4
Q ss_pred CccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcCCh
Q 018088 205 MEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDP 284 (361)
Q Consensus 205 ~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGDs~ 284 (361)
.+...++|+.|+++|++++++||.....+...++.+|+..+|+. ..+||+.+..+++++|++|++|++|||+.
T Consensus 37 ~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~~~~~-------~k~k~~~~~~~~~~~~~~~~~~~~vGD~~ 109 (180)
T 1k1e_A 37 HVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKLFFLG-------KLEKETACFDLMKQAGVTAEQTAYIGDDS 109 (180)
T ss_dssp EHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCEEEES-------CSCHHHHHHHHHHHHTCCGGGEEEEECSG
T ss_pred ccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCceeecC-------CCCcHHHHHHHHHHcCCCHHHEEEECCCH
Confidence 34455789999999999999999999999999999999877643 36789999999999999999999999999
Q ss_pred HHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhhh
Q 018088 285 RAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNEL 322 (361)
Q Consensus 285 ~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~EL 322 (361)
+|+.+++++|+.+++ +.........||+++.+..+.
T Consensus 110 ~Di~~~~~ag~~~~~--~~~~~~~~~~ad~v~~~~~~~ 145 (180)
T 1k1e_A 110 VDLPAFAACGTSFAV--ADAPIYVKNAVDHVLSTHGGK 145 (180)
T ss_dssp GGHHHHHHSSEEEEC--TTSCHHHHTTSSEECSSCTTT
T ss_pred HHHHHHHHcCCeEEe--CCccHHHHhhCCEEecCCCCC
Confidence 999999999998765 233333345799999987543
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=2.4e-15 Score=131.79 Aligned_cols=100 Identities=13% Similarity=0.153 Sum_probs=86.5
Q ss_pred HHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHH
Q 018088 211 WLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAA 290 (361)
Q Consensus 211 lL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA 290 (361)
+|+.|+++|++++|+||.....+...++.+|+..+|+. .++||+.+..+++++|++|++|++|||+.+|+.+|
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~~~~~-------~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di~~a 133 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGITHLYQG-------QSNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVM 133 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCEEECS-------CSCSHHHHHHHHHHHTCCGGGEEEEESSGGGHHHH
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCceeecC-------CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHH
Confidence 78999999999999999999999999999999876653 37889999999999999999999999999999999
Q ss_pred HHcCCeEEEEeCCCCcccccCcceEeCCh
Q 018088 291 HNCTMMAVGLIGAHRAYDLVQADLAVANF 319 (361)
Q Consensus 291 ~~aG~~~v~V~g~~~~~~l~~ad~vi~sl 319 (361)
+++|+.+++ +.........||+++.+.
T Consensus 134 ~~ag~~~~~--~~~~~~~~~~ad~v~~~~ 160 (188)
T 2r8e_A 134 EKVGLSVAV--ADAHPLLIPRADYVTRIA 160 (188)
T ss_dssp TTSSEEEEC--TTSCTTTGGGSSEECSSC
T ss_pred HHCCCEEEe--cCcCHHHHhcCCEEEeCC
Confidence 999998765 222333334699999987
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=7.7e-18 Score=158.58 Aligned_cols=124 Identities=15% Similarity=0.116 Sum_probs=97.2
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHH--H-HHHHhCC-CCcccceeEecCCCCCC--ChHHHHHHHHHcCCCCCc
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKM--V-EALERMG-LLKYFQAIVSEEDGMES--MAHRFLSAAVKLDRKPSK 276 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~--~-~~L~~lg-l~~~Fd~iv~~e~~~~~--KP~~~~~~~~klgi~p~~ 276 (361)
.++|++.++++.|++.|+ ++++||...... . ..+...| +..+|+.+++.++...+ ||++|..+++++|++|++
T Consensus 156 ~~~~~~~~~l~~l~~~g~-~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgi~~~e 234 (306)
T 2oyc_A 156 FSFAKLREACAHLRDPEC-LLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFECITENFSIDPAR 234 (306)
T ss_dssp CCHHHHHHHHHHHTSTTS-EEEESCCCCEEECTTSCEEECHHHHHHHHHHHHTCCCEECSTTSTHHHHHHHHHSCCCGGG
T ss_pred CCHHHHHHHHHHHHcCCC-EEEEEcCCccccCCCCCcCCCCcHHHHHHHHHhCCCceeeCCCCHHHHHHHHHHcCCChHH
Confidence 568999999999999998 999999875543 1 2233344 56678877777765544 567999999999999999
Q ss_pred EEEEcCCh-HHHHHHHHcCCeEEEE-eCCCCcccc----------cCcceEeCChhhhHHHHH
Q 018088 277 CVVFEDDP-RAITAAHNCTMMAVGL-IGAHRAYDL----------VQADLAVANFNELSVINL 327 (361)
Q Consensus 277 ~v~IGDs~-~Di~aA~~aG~~~v~V-~g~~~~~~l----------~~ad~vi~sl~EL~~~ll 327 (361)
|++|||+. +|+.||+++|+.+++| +|.....++ ..||++++++.||..++.
T Consensus 235 ~l~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~pd~vi~~l~el~~~l~ 297 (306)
T 2oyc_A 235 TLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADLTEGLE 297 (306)
T ss_dssp EEEEESCTTTHHHHHHHHTCEEEEESSSSCCHHHHHHHHHTTCGGGSCSEEESSGGGGGGGC-
T ss_pred EEEECCCchHHHHHHHHCCCeEEEECCCCCCHHHHHhhhcccccCCCCCEEECCHHHHHHHHH
Confidence 99999996 9999999999999999 444433222 369999999999976543
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=99.60 E-value=1.2e-16 Score=148.96 Aligned_cols=123 Identities=7% Similarity=-0.042 Sum_probs=96.7
Q ss_pred CCCccHHHHHHHHhhC-CCcEEEEeCC---------------------CHHHHHHHHHhCCCCccccee----------E
Q 018088 203 EPMEGLQEWLDAVSSA-RIPCAVVSGL---------------------DRRKMVEALERMGLLKYFQAI----------V 250 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~-Gi~vaivSn~---------------------~~~~~~~~L~~lgl~~~Fd~i----------v 250 (361)
.+.+++.++++.+++. |+++++.|+. ....+...++..|+..+|+.+ +
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 201 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDPEDSY 201 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEEECCGGGTCCTTEE
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEEEccccccCCCCce
Confidence 5689999999999987 9999999976 556777788888987777654 4
Q ss_pred ecCCC--CCCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhh--hHHHH
Q 018088 251 SEEDG--MESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNE--LSVIN 326 (361)
Q Consensus 251 ~~e~~--~~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~E--L~~~l 326 (361)
+.+.. ..+||+.+..+++++|++|++|++|||+.||+.|++++|+.+++ ++........|++++.+..+ +...+
T Consensus 202 ~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~--~~~~~~~~~~a~~v~~~~~~~gv~~~~ 279 (289)
T 3gyg_A 202 DVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLL--KNATQEAKNLHNLITDSEYSKGITNTL 279 (289)
T ss_dssp EEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEEC--TTCCHHHHHHCCCBCSSCHHHHHHHHH
T ss_pred EEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEE--CCccHHHHHhCCEEcCCCCcCHHHHHH
Confidence 44443 34578999999999999999999999999999999999966444 44444444568999998777 44443
Q ss_pred H
Q 018088 327 L 327 (361)
Q Consensus 327 l 327 (361)
.
T Consensus 280 ~ 280 (289)
T 3gyg_A 280 K 280 (289)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.59 E-value=1.2e-16 Score=147.06 Aligned_cols=120 Identities=13% Similarity=0.032 Sum_probs=94.2
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCHHHH--HHHHHh-CCCCcccceeEecCCCCCCC--hHHHHHHHHHcCCCCCc
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDRRKM--VEALER-MGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDRKPSK 276 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~--~~~L~~-lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi~p~~ 276 (361)
..++|++.++++.|+ +|+++ ++||.+.... ...+.. .++..+|+.+++.+....+| |++|..++++ ++|++
T Consensus 129 ~~~~~~~~~~l~~L~-~g~~~-i~tn~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~--~~~~~ 204 (263)
T 1zjj_A 129 DLTYEKLKYATLAIR-NGATF-IGTNPDATLPGEEGIYPGAGSIIAALKVATNVEPIIIGKPNEPMYEVVREM--FPGEE 204 (263)
T ss_dssp TCBHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHCCCCEECSTTSHHHHHHHHHH--STTCE
T ss_pred CCCHHHHHHHHHHHH-CCCEE-EEECCCccccCCCCCcCCcHHHHHHHHHHhCCCccEecCCCHHHHHHHHHh--CCccc
Confidence 356899999999999 89988 9999876543 222322 45667888888887754444 6799999998 99999
Q ss_pred EEEEcCCh-HHHHHHHHcCCeEEEE-eCCCCccccc----CcceEeCChhhhHHH
Q 018088 277 CVVFEDDP-RAITAAHNCTMMAVGL-IGAHRAYDLV----QADLAVANFNELSVI 325 (361)
Q Consensus 277 ~v~IGDs~-~Di~aA~~aG~~~v~V-~g~~~~~~l~----~ad~vi~sl~EL~~~ 325 (361)
|+||||++ +|+.+|+++|+.+++| +|.....++. .||++++++.||..+
T Consensus 205 ~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~p~~~~~~l~el~~~ 259 (263)
T 1zjj_A 205 LWMVGDRLDTDIAFAKKFGMKAIMVLTGVSSLEDIKKSEYKPDLVLPSVYELIDY 259 (263)
T ss_dssp EEEEESCTTTHHHHHHHTTCEEEEESSSSCCHHHHTTCSSCCSEEESSGGGGGGG
T ss_pred EEEECCChHHHHHHHHHcCCeEEEECCCCCChHHHHhcCCCCCEEECCHHHHHHH
Confidence 99999996 8999999999999999 4444433332 699999999998764
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=9.4e-16 Score=133.06 Aligned_cols=100 Identities=11% Similarity=0.068 Sum_probs=84.6
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCC---------------CHHHHHHHHHhCCCCcccceeEec-----CCCCCCC--
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGL---------------DRRKMVEALERMGLLKYFQAIVSE-----EDGMESM-- 259 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~---------------~~~~~~~~L~~lgl~~~Fd~iv~~-----e~~~~~K-- 259 (361)
..++||+.++|+.|+++|++++|+||+ ....+...++.+|+. |+.++.+ ++....|
T Consensus 41 ~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~v~~s~~~~~~~~~~~KP~ 118 (176)
T 2fpr_A 41 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ--FDEVLICPHLPADECDCRKPK 118 (176)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC--EEEEEEECCCGGGCCSSSTTS
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC--eeEEEEcCCCCcccccccCCC
Confidence 478999999999999999999999998 678889999999996 8888643 5655555
Q ss_pred hHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCC
Q 018088 260 AHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGA 303 (361)
Q Consensus 260 P~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~ 303 (361)
|++|..+++++|++|++|+||||+.+|+.+|+++|+.+|+|...
T Consensus 119 p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~v~~~ 162 (176)
T 2fpr_A 119 VKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRE 162 (176)
T ss_dssp CGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTT
T ss_pred HHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeEEEEcCC
Confidence 57999999999999999999999999999999999999998543
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.57 E-value=1.9e-14 Score=132.06 Aligned_cols=70 Identities=13% Similarity=0.089 Sum_probs=60.1
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEcCC-hHHHHHHHHcCCeEEEE-eCCCCccccc--------CcceEeCChhhhHHHH
Q 018088 257 ESMAHRFLSAAVKLDRKPSKCVVFEDD-PRAITAAHNCTMMAVGL-IGAHRAYDLV--------QADLAVANFNELSVIN 326 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p~~~v~IGDs-~~Di~aA~~aG~~~v~V-~g~~~~~~l~--------~ad~vi~sl~EL~~~l 326 (361)
++||+.|..+++++|++|++|++|||+ .+|+.||+++|+.+++| +|......+. .||++++++.||..++
T Consensus 187 kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~~~~~g~~~~~v~~g~~~~~~~~~~~~~~~~~~d~v~~~~~el~~~l 266 (268)
T 3qgm_A 187 KPSEVIMREALDILGLDAKDVAVVGDQIDVDVAAGKAIGAETVLVLTGVTTRENLDQMIERHGLKPDYVFNSLKDMVEAL 266 (268)
T ss_dssp TTSHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCTTTHHHHHHHHTCCCSEEESSHHHHHHTC
T ss_pred CCCHHHHHHHHHHhCCCchhEEEECCCchHHHHHHHHCCCcEEEECCCCCCHHHHHhhccccCCCCCEEECCHHHHHHHH
Confidence 345689999999999999999999999 59999999999999999 5555555444 7999999999998753
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.56 E-value=3e-16 Score=145.85 Aligned_cols=132 Identities=11% Similarity=0.049 Sum_probs=89.6
Q ss_pred CccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhC-CCCcccceeEecCC------CCCCChHHHHHHHHHcCCCCCcE
Q 018088 205 MEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERM-GLLKYFQAIVSEED------GMESMAHRFLSAAVKLDRKPSKC 277 (361)
Q Consensus 205 ~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~l-gl~~~Fd~iv~~e~------~~~~KP~~~~~~~~klgi~p~~~ 277 (361)
.+++.+++..+....+++.+..+ .......++.+ .....+..+.++.. ....|+..+..+++++|++|++|
T Consensus 144 ~~~~~~~~~~~~~~~~ki~~~~~--~~~~~~~~~~l~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~ 221 (290)
T 3dnp_A 144 VESLSDLLMDEPVSAPVIEVYTE--HDIQHDITETITKAFPAVDVIRVNDEKLNIVPKGVSKEAGLALVASELGLSMDDV 221 (290)
T ss_dssp CSCHHHHHHHSCCCCSEEEEECC--GGGHHHHHHHHHHHCTTEEEEEEETTEEEEEETTCCHHHHHHHHHHHTTCCGGGE
T ss_pred cCCHHHHHhcCCCCceEEEEeCC--HHHHHHHHHHHHhhCCcEEEEEeCCCeEEEEECCCCHHHHHHHHHHHcCCCHHHE
Confidence 45667777776666677744333 23344444432 11223344443321 23458999999999999999999
Q ss_pred EEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhh--hHHHHHHhhHhcCCCChhh
Q 018088 278 VVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNE--LSVINLRRLFANKGSTFME 340 (361)
Q Consensus 278 v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~E--L~~~ll~~l~~~~~~~~~~ 340 (361)
++|||+.||++|++.||+++++ ++........||+++.+.+| +...+.+.+..+...+|.+
T Consensus 222 i~~GD~~NDi~m~~~ag~~vam--~na~~~~k~~Ad~v~~s~~edGv~~~i~~~~~~~~~~~~~~ 284 (290)
T 3dnp_A 222 VAIGHQYDDLPMIELAGLGVAM--GNAVPEIKRKADWVTRSNDEQGVAYMMKEYFRMQQRKGFLD 284 (290)
T ss_dssp EEEECSGGGHHHHHHSSEEEEC--TTSCHHHHHHSSEECCCTTTTHHHHHHHHHHHHHHHC----
T ss_pred EEECCchhhHHHHHhcCCEEEe--cCCcHHHHHhcCEECCCCCccHHHHHHHHHHHhcCcccHHh
Confidence 9999999999999999987666 55555555679999999888 8887777777666666655
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.55 E-value=5.6e-15 Score=135.62 Aligned_cols=84 Identities=13% Similarity=0.095 Sum_probs=63.7
Q ss_pred cccceeEecCCCC--CCChHHHHHHHHHcCCCCCcEEEEcCC-hHHHHHHHHcCCeEEEE-eCCCCccccc----CcceE
Q 018088 244 KYFQAIVSEEDGM--ESMAHRFLSAAVKLDRKPSKCVVFEDD-PRAITAAHNCTMMAVGL-IGAHRAYDLV----QADLA 315 (361)
Q Consensus 244 ~~Fd~iv~~e~~~--~~KP~~~~~~~~klgi~p~~~v~IGDs-~~Di~aA~~aG~~~v~V-~g~~~~~~l~----~ad~v 315 (361)
.+|+.+++.+... ++||..|..+++++|++|++|++|||+ .||+.||+++|+.+++| +|.....++. .||++
T Consensus 168 ~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~d~v 247 (266)
T 3pdw_A 168 SVLTVSTGVQPVFIGKPESIIMEQAMRVLGTDVSETLMVGDNYATDIMAGINAGMDTLLVHTGVTKREHMTDDMEKPTHA 247 (266)
T ss_dssp HHHHHHHCCCCEECSTTSSHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEECCC------CCTTSCCCSEE
T ss_pred HHHHHHhCCCccccCCCCHHHHHHHHHHcCCChhhEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEE
Confidence 3445455555443 445689999999999999999999999 79999999999999999 4544444443 49999
Q ss_pred eCChhhhHHHHH
Q 018088 316 VANFNELSVINL 327 (361)
Q Consensus 316 i~sl~EL~~~ll 327 (361)
++++.||..-..
T Consensus 248 ~~~~~el~~~~~ 259 (266)
T 3pdw_A 248 IDSLTEWIPYIE 259 (266)
T ss_dssp ESSGGGGHHHHH
T ss_pred eCCHHHHHHHhh
Confidence 999999987654
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=99.54 E-value=3.3e-15 Score=137.35 Aligned_cols=79 Identities=16% Similarity=0.132 Sum_probs=63.7
Q ss_pred ccceeEecCCCCCCC--hHHHHHHHHHcCCCCCcEEEEcCC-hHHHHHHHHcCCeEEEE-eCCCCccccc----CcceEe
Q 018088 245 YFQAIVSEEDGMESM--AHRFLSAAVKLDRKPSKCVVFEDD-PRAITAAHNCTMMAVGL-IGAHRAYDLV----QADLAV 316 (361)
Q Consensus 245 ~Fd~iv~~e~~~~~K--P~~~~~~~~klgi~p~~~v~IGDs-~~Di~aA~~aG~~~v~V-~g~~~~~~l~----~ad~vi 316 (361)
+|+.+++.+....+| |++|..+++++|++|++|++|||+ .+|+.||+++|+.+++| +|......+. .||+++
T Consensus 168 ~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~pd~~~ 247 (264)
T 3epr_A 168 LLEAATRIKPVFIGKPNAIIMNKALEILNIPRNQAVMVGDNYLTDIMAGINNDIDTLLVTTGFTTVEEVPDLPIQPSYVL 247 (264)
T ss_dssp HHHHHHSCCCEECSTTSHHHHHHHHHHHTSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCGGGGGGCSSCCSEEE
T ss_pred HHHHHhCCCcccCCCCCHHHHHHHHHHhCcCcccEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEEE
Confidence 444455555544444 578999999999999999999999 69999999999999999 5555555543 699999
Q ss_pred CChhhhH
Q 018088 317 ANFNELS 323 (361)
Q Consensus 317 ~sl~EL~ 323 (361)
+++.||.
T Consensus 248 ~~l~~l~ 254 (264)
T 3epr_A 248 ASLDEWT 254 (264)
T ss_dssp SCGGGCC
T ss_pred CCHHHHh
Confidence 9999974
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=1.5e-14 Score=142.24 Aligned_cols=94 Identities=14% Similarity=0.160 Sum_probs=84.0
Q ss_pred CCccHHHHHHHHhhCCCcEEEEeCCC------------HHHHHHHHHhCCCCcccceeEecCCCCCCCh--HHHHHHHHH
Q 018088 204 PMEGLQEWLDAVSSARIPCAVVSGLD------------RRKMVEALERMGLLKYFQAIVSEEDGMESMA--HRFLSAAVK 269 (361)
Q Consensus 204 ~~pgv~elL~~L~~~Gi~vaivSn~~------------~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP--~~~~~~~~k 269 (361)
++||+.++|+.|+++|++++|+||.. ...+...++.+|+ +|+.+++++++..+|| ++|+.++++
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl--~fd~i~~~~~~~~~KP~p~~~~~a~~~ 165 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGV--PFQVLVATHAGLNRKPVSGMWDHLQEQ 165 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTS--CCEEEEECSSSTTSTTSSHHHHHHHHH
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCC--CEEEEEECCCCCCCCCCHHHHHHHHHH
Confidence 79999999999999999999999965 2337788899998 4899999998877775 799999999
Q ss_pred cC----CCCCcEEEEcCCh-----------------HHHHHHHHcCCeEEE
Q 018088 270 LD----RKPSKCVVFEDDP-----------------RAITAAHNCTMMAVG 299 (361)
Q Consensus 270 lg----i~p~~~v~IGDs~-----------------~Di~aA~~aG~~~v~ 299 (361)
+| ++|++|+||||+. .|+.+|+++|+.++.
T Consensus 166 l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~aGi~f~~ 216 (416)
T 3zvl_A 166 ANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFAT 216 (416)
T ss_dssp SSTTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHHHTCCEEC
T ss_pred hCCCCCCCHHHeEEEECCCCCcccccccccccCCChhhHHHHHHcCCcccC
Confidence 98 9999999999997 799999999999874
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.50 E-value=4.6e-15 Score=137.02 Aligned_cols=71 Identities=11% Similarity=-0.005 Sum_probs=57.7
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhh--hHHHHHHh
Q 018088 257 ESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNE--LSVINLRR 329 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~E--L~~~ll~~ 329 (361)
..|+..+..+++++|++|++|++|||+.||++|++.||+++++ ++........||+++.+.+| +...+.+.
T Consensus 196 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam--~na~~~~k~~A~~v~~~~~e~Gv~~~i~~~ 268 (279)
T 4dw8_A 196 IDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAM--GNAQEPVKKAADYITLTNDEDGVAEAIERI 268 (279)
T ss_dssp CCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC--TTSCHHHHHHCSEECCCGGGTHHHHHHHHH
T ss_pred CChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEc--CCCcHHHHHhCCEEcCCCCCcHHHHHHHHH
Confidence 4589999999999999999999999999999999999976655 55555555679999998776 44444433
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.46 E-value=1e-13 Score=128.77 Aligned_cols=107 Identities=13% Similarity=0.026 Sum_probs=74.7
Q ss_pred hCCCcEEEEe-CCC-HHHHHHHHHhCCCCcccceeEecCC------CCCCChHHHHHHHHHcCCCCCcEEEEcCChHHHH
Q 018088 217 SARIPCAVVS-GLD-RRKMVEALERMGLLKYFQAIVSEED------GMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAIT 288 (361)
Q Consensus 217 ~~Gi~vaivS-n~~-~~~~~~~L~~lgl~~~Fd~iv~~e~------~~~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~ 288 (361)
+..+++.++. ... ......+.+.++ +.+..+.++.. ....|+..+..+++++|+++++|++|||+.||++
T Consensus 164 ~~~~ki~i~~~~~~~~~~~~~l~~~~~--~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ 241 (283)
T 3dao_A 164 NDIIKFTVFHPDKCEELCTPVFIPAWN--KKAHLAAAGKEWVDCNAKGVSKWTALSYLIDRFDLLPDEVCCFGDNLNDIE 241 (283)
T ss_dssp SCCCEEEEECSSCHHHHHTTTHHHHHT--TTEEEEEETTTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHH
T ss_pred cCceEEEEEcChHHHHHHHHHHHHHhc--CCEEEEEecCceEEEeeCCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 5668888883 322 222333334443 23444444432 1235889999999999999999999999999999
Q ss_pred HHHHcCCeEEEEeCCCCcccccCcceEeCChhh--hHHHHH
Q 018088 289 AAHNCTMMAVGLIGAHRAYDLVQADLAVANFNE--LSVINL 327 (361)
Q Consensus 289 aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~E--L~~~ll 327 (361)
|++.||+++++ ++........||+++.+.+| +...+.
T Consensus 242 ml~~ag~~vam--~na~~~~k~~A~~v~~s~~edGv~~~l~ 280 (283)
T 3dao_A 242 MLQNAGISYAV--SNARQEVIAAAKHTCAPYWENGVLSVLK 280 (283)
T ss_dssp HHHHSSEEEEE--TTSCHHHHHHSSEEECCGGGTHHHHHHH
T ss_pred HHHhCCCEEEc--CCCCHHHHHhcCeECCCCCCChHHHHHH
Confidence 99999987666 55555555679999999887 544443
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.45 E-value=3.7e-14 Score=128.00 Aligned_cols=120 Identities=10% Similarity=0.016 Sum_probs=86.5
Q ss_pred ccHHHHHHHHh-hC-CCcE-----------EEEe-CCCHHHHHHHHHhCCCCcccceeEecC----CC--CCCChHHHHH
Q 018088 206 EGLQEWLDAVS-SA-RIPC-----------AVVS-GLDRRKMVEALERMGLLKYFQAIVSEE----DG--MESMAHRFLS 265 (361)
Q Consensus 206 pgv~elL~~L~-~~-Gi~v-----------aivS-n~~~~~~~~~L~~lgl~~~Fd~iv~~e----~~--~~~KP~~~~~ 265 (361)
+.+.++++.++ +. |+.+ ++++ +.....+...++.++ ..|+.+ ++. .. ..+|+..+..
T Consensus 84 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~ei~~~~~~K~~~~~~ 160 (231)
T 1wr8_A 84 DEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVETVREIINELN--LNLVAV-DSGFAIHVKKPWINKGSGIEK 160 (231)
T ss_dssp SHHHHHHHHHHHHCTTCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTT--CSCEEE-ECSSCEEEECTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCceEEecCCCceeeEEEECCCCCHHHHHHHHHhcC--CcEEEE-ecCcEEEEecCCCChHHHHHH
Confidence 66777777776 54 5543 6666 557777888888865 466655 432 12 3457889999
Q ss_pred HHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhh--hHHHHHHhh
Q 018088 266 AAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNE--LSVINLRRL 330 (361)
Q Consensus 266 ~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~E--L~~~ll~~l 330 (361)
+++++|+++++|++|||+.||+.|++.+|+. +++ +.........|++++.+..+ +...+.+.+
T Consensus 161 ~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~-v~~-~~~~~~~~~~a~~v~~~~~e~Gv~~~l~~~~ 225 (231)
T 1wr8_A 161 ASEFLGIKPKEVAHVGDGENDLDAFKVVGYK-VAV-AQAPKILKENADYVTKKEYGEGGAEAIYHIL 225 (231)
T ss_dssp HHHHHTSCGGGEEEEECSGGGHHHHHHSSEE-EEC-TTSCHHHHTTCSEECSSCHHHHHHHHHHHHH
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHcCCe-EEe-cCCCHHHHhhCCEEecCCCcchHHHHHHHHH
Confidence 9999999999999999999999999999998 444 33333333579999999876 555544433
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=99.43 E-value=5.9e-13 Score=122.63 Aligned_cols=98 Identities=13% Similarity=0.130 Sum_probs=77.9
Q ss_pred CCCCCccHHHHHHHHhhCCCcEEEEeCCC---HHHHHHHHHhCCCC--cccceeEecCCCCCCChHHHHHHHHHcCCCCC
Q 018088 201 VTEPMEGLQEWLDAVSSARIPCAVVSGLD---RRKMVEALERMGLL--KYFQAIVSEEDGMESMAHRFLSAAVKLDRKPS 275 (361)
Q Consensus 201 ~~~~~pgv~elL~~L~~~Gi~vaivSn~~---~~~~~~~L~~lgl~--~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~ 275 (361)
...++||+.++|+.|+++|++++|+||.. ...+...|+.+|+. .+|+.+++.++. .||+....+. ..+. +
T Consensus 99 ~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~~v~~~~vi~~~~~~--~K~~~~~~~~-~~~~--~ 173 (258)
T 2i33_A 99 EAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAPQATKEHILLQDPKE--KGKEKRRELV-SQTH--D 173 (258)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCSSCSTTTEEEECTTC--CSSHHHHHHH-HHHE--E
T ss_pred CCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCCcCCCceEEECCCCC--CCcHHHHHHH-HhCC--C
Confidence 34789999999999999999999999987 66778888999998 788888887653 5666555433 2343 3
Q ss_pred cEEEEcCChHHHHHHH-------H---------cCCeEEEEeCC
Q 018088 276 KCVVFEDDPRAITAAH-------N---------CTMMAVGLIGA 303 (361)
Q Consensus 276 ~~v~IGDs~~Di~aA~-------~---------aG~~~v~V~g~ 303 (361)
.|+||||+.+|+.+|+ + +|+.+|++..+
T Consensus 174 ~~l~VGDs~~Di~aA~~~~~~~r~a~v~~~~~~aG~~~i~lpn~ 217 (258)
T 2i33_A 174 IVLFFGDNLSDFTGFDGKSVKDRNQAVTDSKAQFGEKFIIFPNP 217 (258)
T ss_dssp EEEEEESSGGGSTTCSSCCHHHHHHHHHHTGGGBTTTEEECCCC
T ss_pred ceEEeCCCHHHhcccccCCHHHHHHHHHHHHHHhcCceEECCCC
Confidence 4999999999999983 4 89999988443
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=99.42 E-value=2.3e-14 Score=131.04 Aligned_cols=62 Identities=16% Similarity=0.036 Sum_probs=53.1
Q ss_pred CChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhh
Q 018088 258 SMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNE 321 (361)
Q Consensus 258 ~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~E 321 (361)
.|...+..+++++|+++++|++|||+.||++|++.||+++++ ++........||+++.+.+|
T Consensus 183 ~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam--~na~~~~k~~A~~v~~~~~~ 244 (258)
T 2pq0_A 183 SKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAM--GNAHEEVKRVADFVTKPVDK 244 (258)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEE--TTCCHHHHHTCSEEECCGGG
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEe--CCCcHHHHHhCCEEeCCCCc
Confidence 477889999999999999999999999999999999998765 54444444579999998876
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.42 E-value=1.1e-14 Score=134.51 Aligned_cols=77 Identities=13% Similarity=0.062 Sum_probs=48.2
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhhh-HHHHHHhhHhcCC
Q 018088 257 ESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNEL-SVINLRRLFANKG 335 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~EL-~~~ll~~l~~~~~ 335 (361)
..|+..+..+++++|+++++|++|||+.||++|++.||+++++ ++........||+++.+.+|= ....++.++.|.|
T Consensus 196 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam--~na~~~~k~~A~~v~~~~~e~Gv~~~i~~~~~~~~ 273 (279)
T 3mpo_A 196 ASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAM--GNAIDEVKEAAQAVTLTNAENGVAAAIRKYALNEG 273 (279)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC-----CCHHHHHCSCBC------CHHHHHC-------
T ss_pred CChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeec--cCCCHHHHHhcceeccCCCccHHHHHHHHHhcccC
Confidence 3489999999999999999999999999999999999977555 444555556799998876652 2234445555554
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.41 E-value=3e-14 Score=133.80 Aligned_cols=107 Identities=7% Similarity=-0.043 Sum_probs=74.5
Q ss_pred CcEEEEeCCCHHHHHHHHHhCC--CCc-ccceeEecCC------CCCCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHH
Q 018088 220 IPCAVVSGLDRRKMVEALERMG--LLK-YFQAIVSEED------GMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAA 290 (361)
Q Consensus 220 i~vaivSn~~~~~~~~~L~~lg--l~~-~Fd~iv~~e~------~~~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA 290 (361)
+++.+.+. .......++.+. +.+ .++.+.++.. ....|+..+..+++++|+++++|++|||+.||++|+
T Consensus 183 ~ki~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~ 260 (304)
T 3l7y_A 183 FKLTLQVK--EEESAQIMKAIADYKTSQRLVGTASGFGYIDIITKGLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEML 260 (304)
T ss_dssp EEEEEECC--GGGHHHHHHHHHTSTTTTTEEEEECSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHH
T ss_pred EEEEEEcC--HHHHHHHHHHHHHhcCCCeEEEEEcCCceEEEEcCCCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHH
Confidence 34444442 344455554442 333 3555544432 224588999999999999999999999999999999
Q ss_pred HHcCCeEEEEeCCCCcccccCcceEeCChhh--hHHHHHHhh
Q 018088 291 HNCTMMAVGLIGAHRAYDLVQADLAVANFNE--LSVINLRRL 330 (361)
Q Consensus 291 ~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~E--L~~~ll~~l 330 (361)
+.||+++++ ++........||+++.+.+| +...+.+.+
T Consensus 261 ~~ag~~vam--~na~~~~k~~Ad~v~~~~~edGv~~~l~~~~ 300 (304)
T 3l7y_A 261 KLAKYSYAM--ANAPKNVKAAANYQAKSNDESGVLDVIDNYL 300 (304)
T ss_dssp HHCTEEEEC--TTSCHHHHHHCSEECCCGGGTHHHHHHHHHH
T ss_pred HhcCCeEEc--CCcCHHHHHhccEEcCCCCcchHHHHHHHHH
Confidence 999977665 55555555679999999888 666655544
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.40 E-value=1.3e-14 Score=134.70 Aligned_cols=115 Identities=15% Similarity=0.115 Sum_probs=93.9
Q ss_pred cHHHHHHHHhhCCCcEEEEeCCCHHHH--H--HHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHc----CCCCCc
Q 018088 207 GLQEWLDAVSSARIPCAVVSGLDRRKM--V--EALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKL----DRKPSK 276 (361)
Q Consensus 207 gv~elL~~L~~~Gi~vaivSn~~~~~~--~--~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~kl----gi~p~~ 276 (361)
...++++.|+++|++ +|+||.+.... . ..++..++..+|+.+++++++..+| |++|..+++++ |++|++
T Consensus 149 ~~~~l~~~L~~~g~~-~i~tn~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~~~ 227 (284)
T 2hx1_A 149 DLNKTVNLLRKRTIP-AIVANTDNTYPLTKTDVAIAIGGVATMIESILGRRFIRFGKPDSQMFMFAYDMLRQKMEISKRE 227 (284)
T ss_dssp HHHHHHHHHHHCCCC-EEEECCCSEEECSSSCEEECHHHHHHHHHHHHCSCEEEESTTSSHHHHHHHHHHHTTSCCCGGG
T ss_pred cHHHHHHHHhcCCCe-EEEECCCccccCcCCCccccCChHHHHHHHHhCCceeEecCCCHHHHHHHHHHHhhccCCCcce
Confidence 677778899999999 99999876655 3 1235567888999999888765555 57999999999 999999
Q ss_pred EEEEcCCh-HHHHHHHHcCCeEEEE-eCCCCcccc--------cCcceEeCChhhh
Q 018088 277 CVVFEDDP-RAITAAHNCTMMAVGL-IGAHRAYDL--------VQADLAVANFNEL 322 (361)
Q Consensus 277 ~v~IGDs~-~Di~aA~~aG~~~v~V-~g~~~~~~l--------~~ad~vi~sl~EL 322 (361)
|+||||++ +|+.+|+++|+.+++| +|.....++ ..||++++++.||
T Consensus 228 ~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~~~~~~pd~~~~~l~el 283 (284)
T 2hx1_A 228 ILMVGDTLHTDILGGNKFGLDTALVLTGNTRIDDAETKIKSTGIVPTHICESAVIE 283 (284)
T ss_dssp EEEEESCTTTHHHHHHHHTCEEEEESSSSSCGGGHHHHHHHHTCCCSEEESCSCCC
T ss_pred EEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHHhhhhccCCCCCEEccchhhh
Confidence 99999996 9999999999999999 444444433 3689999999886
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.39 E-value=3.7e-13 Score=123.46 Aligned_cols=99 Identities=7% Similarity=-0.051 Sum_probs=72.7
Q ss_pred CCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecC------C--CCCCChHHHHHHHHHcCCCCCcEEEEcCChHHHHH
Q 018088 218 ARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEE------D--GMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITA 289 (361)
Q Consensus 218 ~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e------~--~~~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~a 289 (361)
.++...++. .........++.++. .|+.+.+.. . ....|+..+..+++++|++|++|++|||+.||++|
T Consensus 155 ~~~~ki~~~-~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m 231 (274)
T 3fzq_A 155 QDIHKICLW-SNEKVFDEVKDILQD--KMELAQRDISSQYYEIIQKDFHKGKAIKRLQERLGVTQKETICFGDGQNDIVM 231 (274)
T ss_dssp CCCCEEEEE-CCHHHHHHHHHHHGG--GEEEEEEEGGGTEEEEEETTCSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHH
T ss_pred cCeEEEEEE-cCHHHHHHHHHHhhc--ceEEEeccCCCceEEEeeCCCCHHHHHHHHHHHcCCCHHHEEEECCChhHHHH
Confidence 344334444 556666777776653 255555443 1 23458899999999999999999999999999999
Q ss_pred HHHcCCeEEEEeCCCCcccccCcceEeCChhh
Q 018088 290 AHNCTMMAVGLIGAHRAYDLVQADLAVANFNE 321 (361)
Q Consensus 290 A~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~E 321 (361)
++.||+++++ ++........||+++.+.+|
T Consensus 232 ~~~ag~~vam--~na~~~~k~~A~~v~~~~~e 261 (274)
T 3fzq_A 232 FQASDVTIAM--KNSHQQLKDIATSICEDIFD 261 (274)
T ss_dssp HHTCSEEEEE--TTSCHHHHHHCSEEECCGGG
T ss_pred HHhcCceEEe--cCccHHHHHhhhheeCCCch
Confidence 9999977665 55555555679999998876
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=99.37 E-value=1.3e-14 Score=133.11 Aligned_cols=124 Identities=13% Similarity=0.106 Sum_probs=86.8
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCH------HHHH-HHHHhCCC-------------CcccceeEecCC--------
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDR------RKMV-EALERMGL-------------LKYFQAIVSEED-------- 254 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~------~~~~-~~L~~lgl-------------~~~Fd~iv~~e~-------- 254 (361)
.+.+++.++++.+++.|+++++.|+... .... ..+..+++ ..+++.++..++
T Consensus 85 l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ 164 (261)
T 2rbk_A 85 IPQEEVKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEASNKEVIQMTPFITEEEEKEVLP 164 (261)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEECSSCEEEESCCHHHHHHTTTTTCCCCCCBCCHHHHHTSCCSEEEECCCHHHHHHHGG
T ss_pred CCHHHHHHHHHHHHHcCCeEEEEeCCcEEEeCccHHHHHHHHHhhcccCCCccccchhccCceeEEEEEeCHHHHHHHHH
Confidence 3468889999999888888888875432 2222 22222332 234444433221
Q ss_pred -----------------C--CCCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceE
Q 018088 255 -----------------G--MESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLA 315 (361)
Q Consensus 255 -----------------~--~~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~v 315 (361)
. ..+||..+..+++++|++|++|++|||+.||+.|++.+|+.+++ ++........|+++
T Consensus 165 ~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~--~n~~~~~~~~a~~v 242 (261)
T 2rbk_A 165 SIPTCEIGRWYPAFADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAM--GQAKEDVKAAADYV 242 (261)
T ss_dssp GSTTCEEECSSTTCCEEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC--TTSCHHHHHHSSEE
T ss_pred hcCCeEEEEecCCeEEecCCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEe--cCccHHHHhhCCEE
Confidence 1 23478999999999999999999999999999999999997554 44333333569999
Q ss_pred eCChhh--hHHHHHH
Q 018088 316 VANFNE--LSVINLR 328 (361)
Q Consensus 316 i~sl~E--L~~~ll~ 328 (361)
+.+..+ +...+.+
T Consensus 243 ~~~~~~dGv~~~l~~ 257 (261)
T 2rbk_A 243 TAPIDEDGISKAMKH 257 (261)
T ss_dssp CCCGGGTHHHHHHHH
T ss_pred eccCchhhHHHHHHH
Confidence 999999 8776554
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=99.34 E-value=3.2e-12 Score=119.62 Aligned_cols=96 Identities=10% Similarity=-0.049 Sum_probs=81.0
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHH---HHHHHHh--------CCCCcccceeEecCCCC-CCChHHHHHHHHHc
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRK---MVEALER--------MGLLKYFQAIVSEEDGM-ESMAHRFLSAAVKL 270 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~---~~~~L~~--------lgl~~~Fd~iv~~e~~~-~~KP~~~~~~~~kl 270 (361)
.++||+.++|+.|+++|++++++||..... +...|+. +|+ +|+.+++.++.. +++|+++..+++++
T Consensus 188 ~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~kp~p~~~~~~~~~~ 265 (301)
T 1ltq_A 188 VINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGV--PLVMQCQREQGDTRKDDVVKEEIFWKH 265 (301)
T ss_dssp CBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCC--CCSEEEECCTTCCSCHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCC--CchheeeccCCCCcHHHHHHHHHHHHH
Confidence 458999999999999999999999987443 4666777 898 589988876652 23467899999999
Q ss_pred CCCCCc-EEEEcCChHHHHHHHHcCCeEEEE
Q 018088 271 DRKPSK-CVVFEDDPRAITAAHNCTMMAVGL 300 (361)
Q Consensus 271 gi~p~~-~v~IGDs~~Di~aA~~aG~~~v~V 300 (361)
+..+.+ |+||||+.+|+.+|++||+.+++|
T Consensus 266 ~~~~~~~~~~vgD~~~di~~a~~aG~~~~~v 296 (301)
T 1ltq_A 266 IAPHFDVKLAIDDRTQVVEMWRRIGVECWQV 296 (301)
T ss_dssp TTTTCEEEEEEECCHHHHHHHHHTTCCEEEC
T ss_pred hccccceEEEeCCcHHHHHHHHHcCCeEEEe
Confidence 887755 799999999999999999999998
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.33 E-value=3e-12 Score=110.34 Aligned_cols=97 Identities=5% Similarity=-0.077 Sum_probs=79.7
Q ss_pred HHHHHhhCCCcEEEEeCCCHHHHHHHHH--hCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcCChHHHH
Q 018088 211 WLDAVSSARIPCAVVSGLDRRKMVEALE--RMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAIT 288 (361)
Q Consensus 211 lL~~L~~~Gi~vaivSn~~~~~~~~~L~--~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~ 288 (361)
.|+.|+++|++++|+||. ..+...++ .+|+. +| .+ ...||+.+..+++++|++|++|++|||+.||+.
T Consensus 44 ~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~-~~----~g---~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~ 113 (168)
T 3ewi_A 44 GISLLKKSGIEVRLISER--ACSKQTLSALKLDCK-TE----VS---VSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEE 113 (168)
T ss_dssp HHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC-EE----CS---CSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHH
T ss_pred HHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE-EE----EC---CCChHHHHHHHHHHcCcChHHEEEEeCCHhHHH
Confidence 588899999999999999 77888899 56764 33 22 257999999999999999999999999999999
Q ss_pred HHHHcCCeEEEEeCCCCcccccCcceEeCCh
Q 018088 289 AAHNCTMMAVGLIGAHRAYDLVQADLAVANF 319 (361)
Q Consensus 289 aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl 319 (361)
|++++|+.+++ ++........||+++.+-
T Consensus 114 ~~~~ag~~~a~--~na~~~~k~~Ad~v~~~~ 142 (168)
T 3ewi_A 114 CLKRVGLSAVP--ADACSGAQKAVGYICKCS 142 (168)
T ss_dssp HHHHSSEEEEC--TTCCHHHHTTCSEECSSC
T ss_pred HHHHCCCEEEe--CChhHHHHHhCCEEeCCC
Confidence 99999998554 334444456799999864
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.28 E-value=1.6e-12 Score=119.11 Aligned_cols=63 Identities=16% Similarity=0.033 Sum_probs=54.5
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhh
Q 018088 257 ESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNE 321 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~E 321 (361)
..|+..+..+++++|+++++|++|||+.||++|++.||+++++ ++........||+++.+.+|
T Consensus 193 ~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam--~na~~~~k~~Ad~v~~~~~e 255 (268)
T 3r4c_A 193 TSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAM--GNASEKVQSVADFVTDTVDN 255 (268)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC--TTSCHHHHHTCSEECCCTTT
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEe--CCCcHHHHHhcCEeeCCCCc
Confidence 4688999999999999999999999999999999999987665 55555555679999998776
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.24 E-value=4.4e-13 Score=124.53 Aligned_cols=104 Identities=13% Similarity=0.043 Sum_probs=68.7
Q ss_pred hhCCCcEEEEeCCCHHHHHHHHHhCC--CCcccceeEecCC------CCCCChHHHHHHHHHcCCCCCcEEEEcCChHHH
Q 018088 216 SSARIPCAVVSGLDRRKMVEALERMG--LLKYFQAIVSEED------GMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAI 287 (361)
Q Consensus 216 ~~~Gi~vaivSn~~~~~~~~~L~~lg--l~~~Fd~iv~~e~------~~~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di 287 (361)
...++..+++++..........+.+. +...+..++++.. ....|+..+..+++++|+++++|++|||+.||+
T Consensus 159 ~~~~i~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi 238 (285)
T 3pgv_A 159 DPQGISKVFFTCEDHEHLLPLEQAMNARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDA 238 (285)
T ss_dssp CCSSEEEEEEECSCHHHHHHHHHHHHHHHGGGEEEEESSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGH
T ss_pred CCCCceEEEEeCCCHHHHHHHHHHHHHHhcCCEEEEEeCCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCcHhhH
Confidence 34455555666555554444443331 1122333333321 224589999999999999999999999999999
Q ss_pred HHHHHcCCeEEEEeCCCCcccccCcce--EeCChhh
Q 018088 288 TAAHNCTMMAVGLIGAHRAYDLVQADL--AVANFNE 321 (361)
Q Consensus 288 ~aA~~aG~~~v~V~g~~~~~~l~~ad~--vi~sl~E 321 (361)
+|++.||+++++ ++........|++ ++.+.+|
T Consensus 239 ~ml~~ag~~vAm--~Na~~~vk~~A~~~~v~~sn~e 272 (285)
T 3pgv_A 239 EMLSMAGKGCIM--ANAHQRLKDLHPELEVIGSNAD 272 (285)
T ss_dssp HHHHHSSEEEEC--TTSCHHHHHHCTTSEECCCGGG
T ss_pred HHHHhcCCEEEc--cCCCHHHHHhCCCCEecccCCc
Confidence 999999977666 5555555556763 6666665
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=99.24 E-value=2.7e-12 Score=118.41 Aligned_cols=112 Identities=11% Similarity=-0.013 Sum_probs=78.7
Q ss_pred HhhCCCcEEEEeCCCHHHHHHHHHhCC--CCcccceeEecC----CC--CCCChHHHHHHHHHcCCCCCcEEEEcCChHH
Q 018088 215 VSSARIPCAVVSGLDRRKMVEALERMG--LLKYFQAIVSEE----DG--MESMAHRFLSAAVKLDRKPSKCVVFEDDPRA 286 (361)
Q Consensus 215 L~~~Gi~vaivSn~~~~~~~~~L~~lg--l~~~Fd~iv~~e----~~--~~~KP~~~~~~~~klgi~p~~~v~IGDs~~D 286 (361)
+++.+++++++++.. .....++.++ +...|+.+.++. .. ..+|++.+..+++++|+++++|++|||+.||
T Consensus 142 ~~~~~~ki~i~~~~~--~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD 219 (271)
T 1rlm_A 142 IDDVLFKFSLNLPDE--QIPLVIDKLHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGND 219 (271)
T ss_dssp CCSCEEEEEEECCGG--GHHHHHHHHHHHTTTSSEEEECSTTEEEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGG
T ss_pred CCCceEEEEEEcCHH--HHHHHHHHHHHHcCCcEEEEeccCCeEEEEcCCCChHHHHHHHHHHhCCCHHHEEEECCcHHH
Confidence 344567888887653 3454555443 445666666552 22 3468999999999999999999999999999
Q ss_pred HHHHHHcCCeEEEEeCCCCcccccCcceEeCChhh--hHHHHHHhh
Q 018088 287 ITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNE--LSVINLRRL 330 (361)
Q Consensus 287 i~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~E--L~~~ll~~l 330 (361)
+.|++.+|+.+++ ++........|++++.+.++ +...+.+.+
T Consensus 220 ~~m~~~ag~~va~--~na~~~~k~~a~~v~~~~~~dGVa~~l~~~~ 263 (271)
T 1rlm_A 220 AEMLKMARYSFAM--GNAAENIKQIARYATDDNNHEGALNVIQAVL 263 (271)
T ss_dssp HHHHHHCSEEEEC--TTCCHHHHHHCSEECCCGGGTHHHHHHHHHH
T ss_pred HHHHHHcCCeEEe--CCccHHHHHhCCeeCcCCCCChHHHHHHHHH
Confidence 9999999997543 44433334569999998876 555444433
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.22 E-value=2.2e-11 Score=109.75 Aligned_cols=63 Identities=10% Similarity=-0.074 Sum_probs=50.8
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhh
Q 018088 257 ESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNE 321 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~E 321 (361)
..|+..+..+++++|+++++|++|||+.||+.|++.+|+.++ + ++........|++++.+..+
T Consensus 152 ~~K~~~l~~l~~~~~~~~~~~~~iGD~~nD~~m~~~ag~~va-~-~n~~~~~k~~a~~v~~~~~~ 214 (227)
T 1l6r_A 152 EDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKAC-P-ANATDNIKAVSDFVSDYSYG 214 (227)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEE-C-TTSCHHHHHHCSEECSCCTT
T ss_pred CCHHHHHHHHHHHhCcCHHHEEEECCcHHhHHHHHHcCceEE-e-cCchHHHHHhCCEEecCCCC
Confidence 457889999999999999999999999999999999998743 3 33333333468999988755
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=99.18 E-value=5.1e-12 Score=120.22 Aligned_cols=132 Identities=14% Similarity=0.083 Sum_probs=85.5
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCC----------------------C----
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDG----------------------M---- 256 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~----------------------~---- 256 (361)
.+.+++.++|+.|++ |++++++|+....++....+.+++. +.+.+.... .
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ 178 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVR---GELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGE 178 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCC---SEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHH
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhh---hhhcccccchhhhccccccceeEEecCHHHHhhhhH
Confidence 569999999999999 9999999998777777777776663 222221100 0
Q ss_pred -----------CCChHHHH----------HHHHHcCCCCCc----EEEEcCChHHHHHHHHc----CCeEEEEeCCCCcc
Q 018088 257 -----------ESMAHRFL----------SAAVKLDRKPSK----CVVFEDDPRAITAAHNC----TMMAVGLIGAHRAY 307 (361)
Q Consensus 257 -----------~~KP~~~~----------~~~~klgi~p~~----~v~IGDs~~Di~aA~~a----G~~~v~V~g~~~~~ 307 (361)
..+|..+. +...-.|+++++ |++|||+.||+.|++.| |+.+++ . ....
T Consensus 179 ~~l~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam--n-a~~~ 255 (332)
T 1y8a_A 179 ELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF--N-GNEY 255 (332)
T ss_dssp HHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE--S-CCHH
T ss_pred HHHHHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe--c-CCHH
Confidence 01122232 111112677888 99999999999999999 998554 2 2333
Q ss_pred cccCcceEeCC--hhhhHHHHHHhhHhcCCCChhhHHh
Q 018088 308 DLVQADLAVAN--FNELSVINLRRLFANKGSTFMERQK 343 (361)
Q Consensus 308 ~l~~ad~vi~s--l~EL~~~ll~~l~~~~~~~~~~l~~ 343 (361)
....||+++.+ .+.+...+.+.+. .+...| ..-|
T Consensus 256 lk~~Ad~v~~~~~~dGV~~~l~~~~~-~~~~~~-~~~~ 291 (332)
T 1y8a_A 256 ALKHADVVIISPTAMSEAKVIELFME-RKERAF-EVLS 291 (332)
T ss_dssp HHTTCSEEEECSSTHHHHHHHHHHHH-HGGGGG-GGGG
T ss_pred HHhhCcEEecCCCCCHHHHHHHHHHH-cCCchh-HHHH
Confidence 34579999987 5556665555443 333345 4433
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.13 E-value=2.8e-12 Score=113.22 Aligned_cols=98 Identities=11% Similarity=0.168 Sum_probs=89.9
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEc
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFE 281 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IG 281 (361)
..++||+.++|+.|++. ++++|+|++.+.++..+++.+++..+|+.+++.+++...| +.|.+.++++|.++++||+||
T Consensus 67 v~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~ld~~~~f~~~l~rd~~~~~k-~~~lK~L~~Lg~~~~~~vivD 144 (195)
T 2hhl_A 67 VLKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLLDRWGVFRARLFRESCVFHR-GNYVKDLSRLGRELSKVIIVD 144 (195)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCCSSCEEEEECGGGCEEET-TEEECCGGGSSSCGGGEEEEE
T ss_pred EEeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHhCCcccEEEEEEcccceecC-CceeeeHhHhCCChhHEEEEE
Confidence 46799999999999998 9999999999999999999999999999999998877666 678889999999999999999
Q ss_pred CChHHHHHHHHcCCeEEEEe
Q 018088 282 DDPRAITAAHNCTMMAVGLI 301 (361)
Q Consensus 282 Ds~~Di~aA~~aG~~~v~V~ 301 (361)
|++.++.++.++|+.++.+.
T Consensus 145 Ds~~~~~~~~~ngi~i~~~~ 164 (195)
T 2hhl_A 145 NSPASYIFHPENAVPVQSWF 164 (195)
T ss_dssp SCGGGGTTCGGGEEECCCCS
T ss_pred CCHHHhhhCccCccEEeeec
Confidence 99999999999998876543
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.08 E-value=2.2e-11 Score=113.28 Aligned_cols=62 Identities=16% Similarity=0.068 Sum_probs=50.5
Q ss_pred CChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhh
Q 018088 258 SMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNE 321 (361)
Q Consensus 258 ~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~E 321 (361)
.|+..+..+++++|+++++|++|||+.||+.|++.+|+. +++ ++........|++++.+..+
T Consensus 216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~-va~-~~~~~~~~~~a~~v~~~~~~ 277 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKG-VAM-GNAREDIKSIADAVTLTNDE 277 (288)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEE-EEC-TTCCHHHHHHCSEECCCGGG
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcE-EEE-cCCCHHHHhhCceeecCCCc
Confidence 467889999999999999999999999999999999995 444 33333333458999988776
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.07 E-value=8.3e-12 Score=115.90 Aligned_cols=79 Identities=14% Similarity=0.070 Sum_probs=59.5
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhh--hHHHHHHhhHhcC
Q 018088 257 ESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNE--LSVINLRRLFANK 334 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~E--L~~~ll~~l~~~~ 334 (361)
..|+..+..+++++|+++++|++|||+.||+.|++.+|+.+ ++ ++........|++++.+..+ +...+.+.++.+.
T Consensus 197 ~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~v-a~-~n~~~~~~~~a~~v~~~~~~dGV~~~l~~~~~~~~ 274 (282)
T 1rkq_A 197 VNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGV-AV-DNAIPSVKEVANFVTKSNLEDGVAFAIEKYVLNEG 274 (282)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEE-EC-TTSCHHHHHHCSEECCCTTTTHHHHHHHHHTTC--
T ss_pred CCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEE-Ee-cCCcHHHHhhCCEEecCCCcchHHHHHHHHHhcCC
Confidence 45899999999999999999999999999999999999853 33 33333333469999988766 7777777777777
Q ss_pred CCC
Q 018088 335 GST 337 (361)
Q Consensus 335 ~~~ 337 (361)
||-
T Consensus 275 ~~~ 277 (282)
T 1rkq_A 275 GSH 277 (282)
T ss_dssp ---
T ss_pred Ccc
Confidence 764
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=99.05 E-value=1.2e-09 Score=104.77 Aligned_cols=58 Identities=17% Similarity=0.174 Sum_probs=48.2
Q ss_pred CCCcEEEEcCChH-HHHHHHHcCCeEEEE-eCCCCccc---ccCcceEeCChhhhHHHHHHhh
Q 018088 273 KPSKCVVFEDDPR-AITAAHNCTMMAVGL-IGAHRAYD---LVQADLAVANFNELSVINLRRL 330 (361)
Q Consensus 273 ~p~~~v~IGDs~~-Di~aA~~aG~~~v~V-~g~~~~~~---l~~ad~vi~sl~EL~~~ll~~l 330 (361)
++++|+||||+.. |+.+|+++|+.+++| +|.+.... ...||++++++.|+..++++++
T Consensus 289 ~~~~~~~VGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~pd~vi~~l~el~~~il~~~ 351 (352)
T 3kc2_A 289 PFHAVFMVGDNPASDIIGAQNYGWNSCLVKTGVYNEGDDLKECKPTLIVNDVFDAVTKTLEKY 351 (352)
T ss_dssp TSSEEEEEESCTTTHHHHHHHHTCEEEECSSSSCCTTCCCTTCCCSEECSSHHHHHHHHHHHH
T ss_pred CcceEEEEecCcHHHHHHHHHcCCEEEEEccCCCCcccccccCCCCEEECCHHHHHHHHHHhc
Confidence 6799999999995 999999999999999 44444332 2469999999999999887764
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=99.01 E-value=2e-11 Score=106.41 Aligned_cols=96 Identities=9% Similarity=0.168 Sum_probs=87.2
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEc
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFE 281 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IG 281 (361)
..++||+.++|+.+++. ++++|+|++...++..+++.++...+|+.+++.+++...| +.|.+.++++|.++++||+||
T Consensus 54 v~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~ld~~~~f~~~~~rd~~~~~k-~~~~k~L~~Lg~~~~~~vivd 131 (181)
T 2ght_A 54 VLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKWGAFRARLFRESCVFHR-GNYVKDLSRLGRDLRRVLILD 131 (181)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCTTCCEEEEECGGGSEEET-TEEECCGGGTCSCGGGEEEEC
T ss_pred EEeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHHCCCCcEEEEEeccCceecC-CcEeccHHHhCCCcceEEEEe
Confidence 46799999999999998 9999999999999999999999999999999988876555 567888899999999999999
Q ss_pred CChHHHHHHHHcCCeEEE
Q 018088 282 DDPRAITAAHNCTMMAVG 299 (361)
Q Consensus 282 Ds~~Di~aA~~aG~~~v~ 299 (361)
|++.++.++.++|+.+..
T Consensus 132 Ds~~~~~~~~~ngi~i~~ 149 (181)
T 2ght_A 132 NSPASYVFHPDNAVPVAS 149 (181)
T ss_dssp SCGGGGTTCTTSBCCCCC
T ss_pred CCHHHhccCcCCEeEecc
Confidence 999999999999998543
|
| >2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A* | Back alignment and structure |
|---|
Probab=98.97 E-value=3e-09 Score=106.00 Aligned_cols=96 Identities=11% Similarity=0.030 Sum_probs=81.7
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhC-C-------------CCcccceeEecCCCCCCChH------
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERM-G-------------LLKYFQAIVSEEDGMESMAH------ 261 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~l-g-------------l~~~Fd~iv~~e~~~~~KP~------ 261 (361)
+..-|.+..+|+.|++.| ++.++||+...++...++.+ | ..++||.+|.. ..||.
T Consensus 245 v~kdp~l~~~L~~Lr~~G-KlfLiTNS~~~yv~~~m~yllg~~~~~~~~~~~~dWrdlFD~vI~~----A~KP~FF~~~~ 319 (555)
T 2jc9_A 245 VVKDGKLPLLLSRMKEVG-KVFLATNSDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILVD----ARKPLFFGEGT 319 (555)
T ss_dssp BCCCTHHHHHHHHHHHHS-EEEEECSSCHHHHHHHHHHHTCSSSSSSTTSCCCCGGGGCSEEEES----CCTTGGGTTCC
T ss_pred cCCChHHHHHHHHHHHcC-CEEEEeCCChHHHHHHHHHhcCCCccccccccccchhhhCCEEEEe----CCCCCcccCCC
Confidence 456789999999999999 99999999999999999987 7 34689987765 23332
Q ss_pred -------------------------H-----HHHHHHHcCCCCCcEEEEcCChH-HHHHHH-HcCCeEEEEeC
Q 018088 262 -------------------------R-----FLSAAVKLDRKPSKCVVFEDDPR-AITAAH-NCTMMAVGLIG 302 (361)
Q Consensus 262 -------------------------~-----~~~~~~klgi~p~~~v~IGDs~~-Di~aA~-~aG~~~v~V~g 302 (361)
+ +..+++.+|+.+++|++|||..- ||..++ .+|+.+++|..
T Consensus 320 pfr~Vd~~tg~l~~~~~~~~l~~g~vY~gGn~~~~~~llg~~g~eVLYVGDhIftDIl~~kk~~GWrTiLViP 392 (555)
T 2jc9_A 320 VLRQVDTKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLVIP 392 (555)
T ss_dssp CEEEEETTTTEECSSCCCSCCCTTCCEEECCHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHHCCEEEEECT
T ss_pred cceEeecCCCccccccccccccCCceeccCCHHHHHHHhCCCCCeEEEECCEehHhHHhHHhhcCeEEEEEEe
Confidence 1 47889999999999999999986 999997 89999999854
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.93 E-value=3.4e-09 Score=99.36 Aligned_cols=71 Identities=8% Similarity=0.025 Sum_probs=54.8
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeC-Chhh--hHHHHHHh
Q 018088 257 ESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVA-NFNE--LSVINLRR 329 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~-sl~E--L~~~ll~~ 329 (361)
..|+..+..+++++|+++++|++|||+.||+.|++.+|+.++ + ++........|++++. +..+ +...+.+.
T Consensus 223 ~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va-~-~na~~~~k~~a~~v~~~~~~~dGVa~~l~~~ 296 (301)
T 2b30_A 223 HDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFA-V-ANATDSAKSHAKCVLPVSHREGAVAYLLKKV 296 (301)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEE-C-TTCCHHHHHHSSEECSSCTTTTHHHHHHHHH
T ss_pred CCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEE-E-cCCcHHHHhhCCEEEccCCCCcHHHHHHHHH
Confidence 358899999999999999999999999999999999998644 3 3333333346899998 7655 55544443
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.91 E-value=1.3e-10 Score=107.01 Aligned_cols=68 Identities=12% Similarity=0.083 Sum_probs=53.7
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhh--hHHHH
Q 018088 257 ESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNE--LSVIN 326 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~E--L~~~l 326 (361)
..|+..+..+++++|+++++|++|||+.||+.|++.+|+.+++ ++........|++++.+..+ +...+
T Consensus 189 ~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~--~n~~~~~~~~a~~v~~~~~~dGv~~~i 258 (268)
T 1nf2_A 189 VDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAM--ENAIEKVKEASDIVTLTNNDSGVSYVL 258 (268)
T ss_dssp CCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEEC--TTSCHHHHHHCSEECCCTTTTHHHHHH
T ss_pred CChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEe--cCCCHHHHhhCCEEEccCCcchHHHHH
Confidence 4689999999999999999999999999999999999996544 44333333458999988665 44433
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=98.86 E-value=3.5e-09 Score=97.11 Aligned_cols=85 Identities=15% Similarity=0.187 Sum_probs=67.0
Q ss_pred CCCCCccHHHHHHHHhhCCCcEEEEeCCC----HHHHHHHHHhCCCCcccc-eeEecCCCCCCChHHHHHHHHHcCCCCC
Q 018088 201 VTEPMEGLQEWLDAVSSARIPCAVVSGLD----RRKMVEALERMGLLKYFQ-AIVSEEDGMESMAHRFLSAAVKLDRKPS 275 (361)
Q Consensus 201 ~~~~~pgv~elL~~L~~~Gi~vaivSn~~----~~~~~~~L~~lgl~~~Fd-~iv~~e~~~~~KP~~~~~~~~klgi~p~ 275 (361)
..+++||+.++|+.|++.|++++++||.+ +..+...|+.+|+..+++ .++.... ...|...+..+.+. |. .
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~-~~~K~~~r~~l~~~-Gy--~ 174 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEESAFYLKKD-KSAKAARFAEIEKQ-GY--E 174 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSGGGEEEESS-CSCCHHHHHHHHHT-TE--E
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccccceeccCC-CCChHHHHHHHHhc-CC--C
Confidence 45789999999999999999999999864 468889999999987763 4444332 35677777777665 33 2
Q ss_pred cEEEEcCChHHHHH
Q 018088 276 KCVVFEDDPRAITA 289 (361)
Q Consensus 276 ~~v~IGDs~~Di~a 289 (361)
.+++|||..+|+.+
T Consensus 175 iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 175 IVLYVGDNLDDFGN 188 (262)
T ss_dssp EEEEEESSGGGGCS
T ss_pred EEEEECCChHHhcc
Confidence 39999999999997
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.83 E-value=1.2e-09 Score=99.77 Aligned_cols=60 Identities=8% Similarity=-0.028 Sum_probs=49.0
Q ss_pred CCChHHHHHHHHHcCCCC--CcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhh
Q 018088 257 ESMAHRFLSAAVKLDRKP--SKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNE 321 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p--~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~E 321 (361)
..|+..+..+++++|+++ ++|++|||+.||+.|++.+|+.+++ ++... + .++++..+..+
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~--~na~~--~-~~~~~~~~~~~ 236 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYV--GRGDP--P-EGVLATPAPGP 236 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEEC--SSSCC--C-TTCEECSSCHH
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEe--CChhh--c-CCcEEeCCCCc
Confidence 467999999999999999 9999999999999999999987554 33333 3 67788776544
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=98.78 E-value=1.4e-08 Score=94.65 Aligned_cols=93 Identities=14% Similarity=0.153 Sum_probs=67.9
Q ss_pred CCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecC----CC------------CCCChHHHH
Q 018088 201 VTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEE----DG------------MESMAHRFL 264 (361)
Q Consensus 201 ~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e----~~------------~~~KP~~~~ 264 (361)
..++.||+.++++.|+++|++++++|++....++..++.+|+......+++.. +. ...|+....
T Consensus 139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~~~~~~~~~~~~~~~i~~~~k~~~~~ 218 (297)
T 4fe3_A 139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGAL 218 (297)
T ss_dssp CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHHH
T ss_pred CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEEEcccceeEeccccccchhhcccHHH
Confidence 45789999999999999999999999999999999999999865433333321 10 112333333
Q ss_pred HH--HHHcCCCCCcEEEEcCChHHHHHHHHc
Q 018088 265 SA--AVKLDRKPSKCVVFEDDPRAITAAHNC 293 (361)
Q Consensus 265 ~~--~~klgi~p~~~v~IGDs~~Di~aA~~a 293 (361)
+. ..++.-...+++|+|||.||+.|++.+
T Consensus 219 k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l 249 (297)
T 4fe3_A 219 KNTDYFSQLKDNSNIILLGDSQGDLRMADGV 249 (297)
T ss_dssp TCHHHHHHTTTCCEEEEEESSGGGGGTTTTC
T ss_pred HHHHHHHhhccCCEEEEEeCcHHHHHHHhCc
Confidence 32 223334567899999999999998744
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=98.77 E-value=9.6e-09 Score=94.06 Aligned_cols=85 Identities=14% Similarity=0.204 Sum_probs=65.2
Q ss_pred CCCCCccHHHHHHHHhhCCCcEEEEeCCC----HHHHHHHHHhCCCCcccc-eeEecCCCCCCChHHHHHHHHHcCCCCC
Q 018088 201 VTEPMEGLQEWLDAVSSARIPCAVVSGLD----RRKMVEALERMGLLKYFQ-AIVSEEDGMESMAHRFLSAAVKLDRKPS 275 (361)
Q Consensus 201 ~~~~~pgv~elL~~L~~~Gi~vaivSn~~----~~~~~~~L~~lgl~~~Fd-~iv~~e~~~~~KP~~~~~~~~klgi~p~ 275 (361)
..+++||+.++|+.|++.|++++++||.. +..+...|+.+|+..+++ .++.... ...|...+..+.+ .|. .
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~-~~~K~~~r~~L~~-~gy--~ 174 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVNDKTLLLKKD-KSNKSVRFKQVED-MGY--D 174 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCSTTTEEEESS-CSSSHHHHHHHHT-TTC--E
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccccceeEecCC-CCChHHHHHHHHh-cCC--C
Confidence 34789999999999999999999999874 468899999999987774 3443322 2456555555555 343 3
Q ss_pred cEEEEcCChHHHHH
Q 018088 276 KCVVFEDDPRAITA 289 (361)
Q Consensus 276 ~~v~IGDs~~Di~a 289 (361)
-+++|||..+|+.+
T Consensus 175 iv~~iGD~~~Dl~~ 188 (260)
T 3pct_A 175 IVLFVGDNLNDFGD 188 (260)
T ss_dssp EEEEEESSGGGGCG
T ss_pred EEEEECCChHHcCc
Confidence 39999999999998
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.72 E-value=5.5e-08 Score=100.48 Aligned_cols=113 Identities=10% Similarity=0.066 Sum_probs=89.8
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcC
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFED 282 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGD 282 (361)
++.|++.+.++.|+++|++++++|+.+...+....+.+|++.+|. +..+..|.+.+....+ . ++++||||
T Consensus 457 ~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~~~~-----~~~P~~K~~~v~~l~~----~-~~v~~vGD 526 (645)
T 3j08_A 457 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIA-----EVLPHQKSEEVKKLQA----K-EVVAFVGD 526 (645)
T ss_dssp CCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEEC-----SCCTTCHHHHHHHHTT----T-CCEEEEEC
T ss_pred CchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEE-----eCCHHhHHHHHHHHhh----C-CeEEEEeC
Confidence 578999999999999999999999999999999999999965443 2234456665555544 3 78999999
Q ss_pred ChHHHHHHHHcCCeEEEEeCCCCcccccCcceEe--CChhhhHHHHH
Q 018088 283 DPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAV--ANFNELSVINL 327 (361)
Q Consensus 283 s~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi--~sl~EL~~~ll 327 (361)
+.||+.|++.||++..+ +.+.......||+++ +++..+...+.
T Consensus 527 g~ND~~al~~A~vgiam--g~g~~~a~~~AD~vl~~~~~~~i~~~i~ 571 (645)
T 3j08_A 527 GINDAPALAQADLGIAV--GSGSDVAVESGDIVLIRDDLRDVVAAIQ 571 (645)
T ss_dssp SSSCHHHHHHSSEEEEE--CCCSCCSSCCSSSEESSCCTTHHHHHHH
T ss_pred CHhHHHHHHhCCEEEEe--CCCcHHHHHhCCEEEecCCHHHHHHHHH
Confidence 99999999999966544 455555556799999 77888876544
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.68 E-value=1e-07 Score=92.40 Aligned_cols=92 Identities=10% Similarity=0.056 Sum_probs=68.1
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCccc--ceeEe------------cCCC-------CCCChH
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYF--QAIVS------------EEDG-------MESMAH 261 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~F--d~iv~------------~e~~-------~~~KP~ 261 (361)
+++||++++++.|+++|++++|||+++...++.+.+.+|+..-+ +.+++ +... ..+|+.
T Consensus 221 r~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~~~Vig~~l~~~~dG~~tg~~~~~~p~~~~~gK~~ 300 (385)
T 4gxt_A 221 RTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKEEKVLGLRLMKDDEGKILPKFDKDFPISIREGKVQ 300 (385)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCGGGEEEECEEECTTCCEEEEECTTSCCCSTHHHHH
T ss_pred eeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCcceEEEeEEEEecCCceeeeecCccceeCCCchHH
Confidence 36999999999999999999999999999999999998764221 22322 2111 123666
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCC
Q 018088 262 RFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTM 295 (361)
Q Consensus 262 ~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~ 295 (361)
.+...+++ .+....++++|||.+|+.|.+..+-
T Consensus 301 ~i~~~~~~-~~~~~~i~a~GDs~~D~~ML~~~~~ 333 (385)
T 4gxt_A 301 TINKLIKN-DRNYGPIMVGGDSDGDFAMLKEFDH 333 (385)
T ss_dssp HHHHHTCC-TTEECCSEEEECSGGGHHHHHHCTT
T ss_pred HHHHHHHh-cCCCCcEEEEECCHhHHHHHhcCcc
Confidence 66665543 2444669999999999999998544
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.61 E-value=1.8e-07 Score=97.90 Aligned_cols=113 Identities=10% Similarity=0.067 Sum_probs=89.3
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcC
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFED 282 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGD 282 (361)
++.|++.+.++.|++.|++++++|+.....+....+.+|+..+| .+..+..|.+.+..+.++ ++++||||
T Consensus 535 ~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~~~-----~~~~P~~K~~~v~~l~~~-----~~v~~vGD 604 (723)
T 3j09_A 535 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVI-----AEVLPHQKSEEVKKLQAK-----EVVAFVGD 604 (723)
T ss_dssp CSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEE-----CSCCTTCHHHHHHHHTTT-----CCEEEEEC
T ss_pred CcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCcEEE-----ccCCHHHHHHHHHHHhcC-----CeEEEEEC
Confidence 67999999999999999999999999999999999999996433 233344566655555443 78999999
Q ss_pred ChHHHHHHHHcCCeEEEEeCCCCcccccCcceEe--CChhhhHHHHH
Q 018088 283 DPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAV--ANFNELSVINL 327 (361)
Q Consensus 283 s~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi--~sl~EL~~~ll 327 (361)
+.||+.|.+.||++..+ |.+.......||+++ +++..+...+.
T Consensus 605 g~ND~~al~~A~vgiam--g~g~~~a~~~AD~vl~~~~~~~i~~~i~ 649 (723)
T 3j09_A 605 GINDAPALAQADLGIAV--GSGSDVAVESGDIVLIRDDLRDVVAAIQ 649 (723)
T ss_dssp SSTTHHHHHHSSEEEEC--CCCSCCSSCCSSEECSSCCTTHHHHHHH
T ss_pred ChhhHHHHhhCCEEEEe--CCCcHHHHHhCCEEEeCCCHHHHHHHHH
Confidence 99999999999966444 444555556799999 77888776543
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=98.47 E-value=2.3e-07 Score=96.98 Aligned_cols=113 Identities=12% Similarity=0.104 Sum_probs=87.0
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcC
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFED 282 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGD 282 (361)
++.|++.+.++.|++.|++++++|+.....+....+.+|+++++.. -.|+--..+++++.-..+.++||||
T Consensus 554 ~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~~v~a~---------~~P~~K~~~v~~l~~~g~~V~~vGD 624 (736)
T 3rfu_A 554 PIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIKKVVAE---------IMPEDKSRIVSELKDKGLIVAMAGD 624 (736)
T ss_dssp CBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCCCEECS---------CCHHHHHHHHHHHHHHSCCEEEEEC
T ss_pred cchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCEEEEe---------cCHHHHHHHHHHHHhcCCEEEEEEC
Confidence 6789999999999999999999999999999999999999754321 2454444444444445678999999
Q ss_pred ChHHHHHHHHcCCeEEEEeCCCCcccccCcceEe--CChhhhHHHH
Q 018088 283 DPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAV--ANFNELSVIN 326 (361)
Q Consensus 283 s~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi--~sl~EL~~~l 326 (361)
+.||+.|.+.|+++.++ |.+.......||+++ +++..+...+
T Consensus 625 G~ND~paL~~AdvGIAm--g~g~d~a~~~AD~vl~~~~~~~i~~ai 668 (736)
T 3rfu_A 625 GVNDAPALAKADIGIAM--GTGTDVAIESAGVTLLHGDLRGIAKAR 668 (736)
T ss_dssp SSTTHHHHHHSSEEEEE--SSSCSHHHHHCSEEECSCCSTTHHHHH
T ss_pred ChHhHHHHHhCCEEEEe--CCccHHHHHhCCEEEccCCHHHHHHHH
Confidence 99999999999977555 444444456789998 5677765543
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=98.44 E-value=8.7e-07 Score=95.91 Aligned_cols=122 Identities=11% Similarity=0.116 Sum_probs=87.5
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCccc----ceeEecCCCCCC------------------Ch
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYF----QAIVSEEDGMES------------------MA 260 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~F----d~iv~~e~~~~~------------------KP 260 (361)
++.|++.+.++.|+++|++++++|+.....+....+.+|+.... +.++++++...- .|
T Consensus 603 ~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~~P 682 (995)
T 3ar4_A 603 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEP 682 (995)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEESCCS
T ss_pred CCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCcCCCCCcccceEEEchhhhhCCHHHHHHHHhhCcEEEEeCH
Confidence 67899999999999999999999999999999999999996543 223443221111 13
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeC--ChhhhHHHH
Q 018088 261 HRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVA--NFNELSVIN 326 (361)
Q Consensus 261 ~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~--sl~EL~~~l 326 (361)
+--..+++.+.-..+.|+|+||+.||+.|.+.|+++.++ +.+.......+|+++. ++..+...+
T Consensus 683 ~~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Advgiam--g~g~~~ak~aAd~vl~~~~~~~i~~~i 748 (995)
T 3ar4_A 683 SHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAM--GSGTAVAKTASEMVLADDNFSTIVAAV 748 (995)
T ss_dssp SHHHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTEEEEE--TTSCHHHHHTCSEEETTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHCCeEEEe--CCCCHHHHHhCCEEECCCCHHHHHHHH
Confidence 222333333333357899999999999999999988665 4333334456899994 588776644
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=98.15 E-value=6.4e-06 Score=89.34 Aligned_cols=122 Identities=15% Similarity=0.141 Sum_probs=84.2
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcc------------------------cceeEecCC----
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKY------------------------FQAIVSEED---- 254 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~------------------------Fd~iv~~e~---- 254 (361)
++.|++.+.++.|+++|++++++|+.....+....+.+|+... +..++++++
T Consensus 599 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~~ 678 (1028)
T 2zxe_A 599 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDL 678 (1028)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHTTC
T ss_pred CCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhhhC
Confidence 5789999999999999999999999999999999999998631 112333221
Q ss_pred ---------------CC-CCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeC-CCCcccccCcceEeC
Q 018088 255 ---------------GM-ESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIG-AHRAYDLVQADLAVA 317 (361)
Q Consensus 255 ---------------~~-~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g-~~~~~~l~~ad~vi~ 317 (361)
+. ...|+--..+.+.+.-....|+|+||+.||+.|.+.|+++.++ | .+.......||+++.
T Consensus 679 ~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAm--g~~gtd~ak~aAD~Vl~ 756 (1028)
T 2zxe_A 679 STEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAM--GISGSDVSKQAADMILL 756 (1028)
T ss_dssp CHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEE--SSSCCHHHHHHCSEEET
T ss_pred CHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEEe--CCccCHHHHHhcCEEec
Confidence 11 1245422222222222236799999999999999999988765 4 243333456899886
Q ss_pred C--hhhhHHHH
Q 018088 318 N--FNELSVIN 326 (361)
Q Consensus 318 s--l~EL~~~l 326 (361)
+ +..+...+
T Consensus 757 ~~~~~~I~~~i 767 (1028)
T 2zxe_A 757 DDNFASIVTGV 767 (1028)
T ss_dssp TCCTHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 4 66665443
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=98.12 E-value=6.3e-06 Score=88.04 Aligned_cols=116 Identities=8% Similarity=-0.052 Sum_probs=81.7
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCccc-c---eeE--------------------ecCCCCCC
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYF-Q---AIV--------------------SEEDGMES 258 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~F-d---~iv--------------------~~e~~~~~ 258 (361)
++.|++.+.++.|++.|+++.++|+.....+....+.+|+.... + .++ ...-.+..
T Consensus 535 p~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~~~~~~~~~g~~~~~~~el~~~~~~~~V~arv~P~~ 614 (920)
T 1mhs_A 535 PPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGGGDMPGSEVYDFVEAADGFAEVFPQH 614 (920)
T ss_dssp CCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCCCSSSSSSCBCCCGGGGGGGTTTTTTSCEESCCSTH
T ss_pred cccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCccccCccceeecCcccCCHHHHHHHHhhCeEEEEeCHHH
Confidence 57999999999999999999999999999999999999995321 1 011 11111122
Q ss_pred ChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeC--ChhhhHH
Q 018088 259 MAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVA--NFNELSV 324 (361)
Q Consensus 259 KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~--sl~EL~~ 324 (361)
|..+...+.+ .| +.|.|+||+.||..|.+.|+++.++ +.+.......||+++. ++..+..
T Consensus 615 K~~iV~~Lq~-~g---~~Vam~GDGvNDapaLk~AdvGIAm--g~gtd~ak~aADiVl~~~~~~~I~~ 676 (920)
T 1mhs_A 615 KYNVVEILQQ-RG---YLVAMTGDGVNDAPSLKKADTGIAV--EGSSDAARSAADIVFLAPGLGAIID 676 (920)
T ss_dssp HHHHHHHHHT-TT---CCCEECCCCGGGHHHHHHSSEEEEE--TTSCHHHHHSSSEEESSCCSHHHHH
T ss_pred HHHHHHHHHh-CC---CeEEEEcCCcccHHHHHhCCcCccc--ccccHHHHHhcCeEEcCCCHHHHHH
Confidence 3334443333 23 6899999999999999999988665 4444334456898874 4555443
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=98.07 E-value=1.9e-05 Score=74.81 Aligned_cols=86 Identities=13% Similarity=0.059 Sum_probs=61.5
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhC----CCCcccceeEecC-------------------------
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERM----GLLKYFQAIVSEE------------------------- 253 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~l----gl~~~Fd~iv~~e------------------------- 253 (361)
.++|+++++++.|+++|++++|||.+....++...+.. |+.. +.++++.
T Consensus 143 ~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp~--e~ViG~~~~~~~~~~~~~~~~~~~~~dg~y~~ 220 (327)
T 4as2_A 143 RVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKP--ENVIGVTTLLKNRKTGELTTARKQIAEGKYDP 220 (327)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCCG--GGEEEECEEEECTTTCCEECHHHHHHTTCCCG
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCCH--HHeEeeeeeeeccccccccccccccccccccc
Confidence 46999999999999999999999999999999988864 4421 3344321
Q ss_pred ----------------CCCCCChHHHHHHHHHcCCCCCcEEEEcCCh-HHHHHHHHc
Q 018088 254 ----------------DGMESMAHRFLSAAVKLDRKPSKCVVFEDDP-RAITAAHNC 293 (361)
Q Consensus 254 ----------------~~~~~KP~~~~~~~~klgi~p~~~v~IGDs~-~Di~aA~~a 293 (361)
....+||..+...++ .|- ..++++|||. .|+.|...+
T Consensus 221 ~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~-~g~--~Pi~a~Gns~dgD~~ML~~~ 274 (327)
T 4as2_A 221 KANLDLEVTPYLWTPATWMAGKQAAILTYID-RWK--RPILVAGDTPDSDGYMLFNG 274 (327)
T ss_dssp GGGTTCEEEEEECSSCSSTHHHHHHHHHHTC-SSC--CCSEEEESCHHHHHHHHHHT
T ss_pred cccccccccccccccccccCccHHHHHHHHh-hCC--CCeEEecCCCCCCHHHHhcc
Confidence 012336665555442 133 3489999995 699999653
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=98.00 E-value=1.8e-05 Score=86.00 Aligned_cols=115 Identities=13% Similarity=0.069 Sum_probs=80.0
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCccc------------------------ceeEecCCCC--
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYF------------------------QAIVSEEDGM-- 256 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~F------------------------d~iv~~e~~~-- 256 (361)
++.|++.+.++.|+++|++++++|+.....+....+.+|+...- ..++++.+..
T Consensus 604 p~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~ 683 (1034)
T 3ixz_A 604 PPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDM 683 (1034)
T ss_pred CCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecHhhhhC
Confidence 68999999999999999999999999999999999999884210 1122221110
Q ss_pred ------------------CCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeC-CCCcccccCcceEeC
Q 018088 257 ------------------ESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIG-AHRAYDLVQADLAVA 317 (361)
Q Consensus 257 ------------------~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g-~~~~~~l~~ad~vi~ 317 (361)
...|+--..+.+.+.-....|+|+||+.||+.|.+.||++.++ | .+.......||+++.
T Consensus 684 ~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAM--g~ng~d~aK~aAD~Vl~ 761 (1034)
T 3ixz_A 684 DPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAM--GIAGSDAAKNAADMILL 761 (1034)
T ss_pred CHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEEe--CCccCHHHHHhcCEEec
Confidence 1124322223333322335699999999999999999988665 3 444444456898886
Q ss_pred Ch
Q 018088 318 NF 319 (361)
Q Consensus 318 sl 319 (361)
+.
T Consensus 762 ~~ 763 (1034)
T 3ixz_A 762 DD 763 (1034)
T ss_pred cC
Confidence 53
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=97.80 E-value=5.5e-06 Score=74.97 Aligned_cols=64 Identities=5% Similarity=-0.153 Sum_probs=49.9
Q ss_pred CCCChHHHHHHHHHcCC-CCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCC-cccccCcceEeCChhh
Q 018088 256 MESMAHRFLSAAVKLDR-KPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHR-AYDLVQADLAVANFNE 321 (361)
Q Consensus 256 ~~~KP~~~~~~~~klgi-~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~-~~~l~~ad~vi~sl~E 321 (361)
...|...+..+++++|+ .+++|++|||+.||++|++.+|+++++ ++.. ......|++++++..+
T Consensus 177 g~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~--gna~~~~~~~~a~~v~~~~~~ 242 (249)
T 2zos_A 177 NSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIV--GSLKHKKAQNVSSIIDVLEVI 242 (249)
T ss_dssp SCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEE--SSCCCTTEEEESSHHHHHHHH
T ss_pred CCChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEe--CCCCccccchhceEEeccccc
Confidence 35799999999999998 999999999999999999999987444 4444 2233357777665543
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=97.79 E-value=1e-05 Score=72.94 Aligned_cols=63 Identities=11% Similarity=0.020 Sum_probs=50.0
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCccccc-------CcceEeCChhh
Q 018088 257 ESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLV-------QADLAVANFNE 321 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~-------~ad~vi~sl~E 321 (361)
..|+..+..+++++|+++++|++|||+.||+.|++.+|+.+++ ++....... .+++++.+..+
T Consensus 161 ~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~--~na~~~~k~~a~~~~~~a~~v~~~~~~ 230 (244)
T 1s2o_A 161 SNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIV--RNAQPELLHWYDQWGDSRHYRAQSSHA 230 (244)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEEC--TTCCHHHHHHHHHHCCTTEEECSSCHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEE--cCCcHHHHHHHhcccccceeecCCcch
Confidence 4689999999999999999999999999999999999986433 433332222 27889887765
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.74 E-value=1.6e-05 Score=84.79 Aligned_cols=116 Identities=9% Similarity=0.058 Sum_probs=80.1
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcc-c-ceeEecCC------------------CC-CCChH
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKY-F-QAIVSEED------------------GM-ESMAH 261 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~-F-d~iv~~e~------------------~~-~~KP~ 261 (361)
++.|++.+.++.|++.|+++.++|+.....+....+.+|+..- + +.++.+.+ +. .-.|+
T Consensus 488 p~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~arv~P~ 567 (885)
T 3b8c_A 488 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFAGVFPE 567 (885)
T ss_dssp CCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEECCCHH
T ss_pred ccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccCCcceeeccccccccchhHHHHHHhhCcEEEEECHH
Confidence 5799999999999999999999999999999999999998531 1 11111111 11 11354
Q ss_pred ----HHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCC--hhhhHH
Q 018088 262 ----RFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVAN--FNELSV 324 (361)
Q Consensus 262 ----~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~s--l~EL~~ 324 (361)
+..... +.| +.|.|+||+.||..|.+.|+++.++ +.+.......||+++.+ +..+..
T Consensus 568 ~K~~iV~~lq-~~g---~~Vam~GDGvNDapaLk~AdvGIAm--g~gtd~ak~aADivl~~~~~~~I~~ 630 (885)
T 3b8c_A 568 HKYEIVKKLQ-ERK---HIVGMTGDGVNDAPALKKADIGIAV--ADATDAARGASDIVLTEPGLSVIIS 630 (885)
T ss_dssp HHHHHHHHHH-HTT---CCCCBCCCSSTTHHHHHHSSSCCCC--SSSHHHHGGGCSSCCSSCSHHHHTH
T ss_pred HHHHHHHHHH-HCC---CeEEEEcCCchhHHHHHhCCEeEEe--CCccHHHHHhcceeeccCchhHHHH
Confidence 333333 333 6799999999999999999988665 33333333458887753 555543
|
| >4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A | Back alignment and structure |
|---|
Probab=97.73 E-value=9.9e-05 Score=72.64 Aligned_cols=96 Identities=8% Similarity=0.005 Sum_probs=78.6
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhC---------CCCcccceeEecCCCCCCChH------------
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERM---------GLLKYFQAIVSEEDGMESMAH------------ 261 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~l---------gl~~~Fd~iv~~e~~~~~KP~------------ 261 (361)
...|.+..+|+.|+++|-++.++||++-.++...++.+ ...++||.||+.. .||.
T Consensus 186 ~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~M~y~~~~~~~~g~dWrdlFDvVIv~A----~KP~FF~~~~~~~~v~ 261 (470)
T 4g63_A 186 IREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLA----NKPRFFYDNLRFLSVN 261 (470)
T ss_dssp ECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHTGGGSCTTCCGGGGCSEEEESC----CTTHHHHSCCCEEEEC
T ss_pred hCCHhHHHHHHHHHHcCCeEEEeeCCCchHHHHHHHhhcccCCCCCCChhhhcCEEEECC----CCCCcccCCCcceEEE
Confidence 44789999999999999999999999999999998874 3567899998862 2332
Q ss_pred ---------------------HHHHHHHHcCCCCCcEEEEcCChH-HHHHHHH-cCCeEEEEeC
Q 018088 262 ---------------------RFLSAAVKLDRKPSKCVVFEDDPR-AITAAHN-CTMMAVGLIG 302 (361)
Q Consensus 262 ---------------------~~~~~~~klgi~p~~~v~IGDs~~-Di~aA~~-aG~~~v~V~g 302 (361)
......+.+|....+|++|||+.- ||..++. .|+.|++|..
T Consensus 262 ~~~g~l~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~ 325 (470)
T 4g63_A 262 PENGTMTNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVE 325 (470)
T ss_dssp TTTCCEEECCSSCCSEEEEECCHHHHHHHTTCCGGGEEEEESCCCSCHHHHHHSCCCEEEEECT
T ss_pred CCCCcccccccccCCceeecCcHHHHHHHhCCCCCeEEEECCchHHHHHhhhhccCCeEEEEhH
Confidence 256677788999999999999987 9777765 6999999854
|
| >3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118} | Back alignment and structure |
|---|
Probab=97.64 E-value=5.9e-06 Score=72.89 Aligned_cols=94 Identities=14% Similarity=0.128 Sum_probs=76.8
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCC-cccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEc
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLL-KYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFE 281 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~-~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IG 281 (361)
...||+.++|+.+. .+++++|.|.+...++..+++.++.. .+|+..+..+.+.. ++..|.+.++.+|.++++||+|+
T Consensus 59 ~~RPgl~eFL~~l~-~~yeivI~Tas~~~ya~~vl~~LDp~~~~f~~rl~R~~c~~-~~g~y~KdL~~Lgrdl~~vIiID 136 (204)
T 3qle_A 59 AKRPGADYFLGYLS-QYYEIVLFSSNYMMYSDKIAEKLDPIHAFVSYNLFKEHCVY-KDGVHIKDLSKLNRDLSKVIIID 136 (204)
T ss_dssp EECTTHHHHHHHHT-TTEEEEEECSSCHHHHHHHHHHTSTTCSSEEEEECGGGSEE-ETTEEECCGGGSCSCGGGEEEEE
T ss_pred EeCCCHHHHHHHHH-hCCEEEEEcCCcHHHHHHHHHHhCCCCCeEEEEEEecceeE-ECCeeeecHHHhCCChHHEEEEE
Confidence 67999999999999 56999999999999999999999987 48888777665432 23336677888999999999999
Q ss_pred CChHHHHHHHHcCCeEE
Q 018088 282 DDPRAITAAHNCTMMAV 298 (361)
Q Consensus 282 Ds~~Di~aA~~aG~~~v 298 (361)
|++....+....|+.+.
T Consensus 137 Dsp~~~~~~p~N~I~I~ 153 (204)
T 3qle_A 137 TDPNSYKLQPENAIPME 153 (204)
T ss_dssp SCTTTTTTCGGGEEECC
T ss_pred CCHHHHhhCccCceEee
Confidence 99987766555665443
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00028 Score=64.56 Aligned_cols=85 Identities=9% Similarity=0.087 Sum_probs=59.3
Q ss_pred CCccHHHHHHHHhhCCCcEEEEeC---CCHHHHHHHHHhCCCC-cccceeEecCCCCCCChHHHHHHHHHcCCCCCcEE-
Q 018088 204 PMEGLQEWLDAVSSARIPCAVVSG---LDRRKMVEALERMGLL-KYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCV- 278 (361)
Q Consensus 204 ~~pgv~elL~~L~~~Gi~vaivSn---~~~~~~~~~L~~lgl~-~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v- 278 (361)
+.|++.+.|+.|+++|++++++|| .....+...++.+|+. ..++.+++... .....+.+ +. |.++.
T Consensus 31 ~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~~lg~~~~~~~~ii~~~~-------~~~~~l~~-~~-~~~v~~ 101 (284)
T 2hx1_A 31 LLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHKLGLFSITADKIISSGM-------ITKEYIDL-KV-DGGIVA 101 (284)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCTTCCGGGEEEHHH-------HHHHHHHH-HC-CSEEEE
T ss_pred eChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHHHHCCcCCCCHhhEEcHHH-------HHHHHHHh-hc-CCcEEE
Confidence 357888889999999999999998 5667788888999997 77777777522 22222221 12 23777
Q ss_pred EEcCChHHHHHHHHcCCeEE
Q 018088 279 VFEDDPRAITAAHNCTMMAV 298 (361)
Q Consensus 279 ~IGDs~~Di~aA~~aG~~~v 298 (361)
++|.. .....++..|+..+
T Consensus 102 ~lg~~-~l~~~l~~~G~~~~ 120 (284)
T 2hx1_A 102 YLGTA-NSANYLVSDGIKML 120 (284)
T ss_dssp EESCH-HHHHTTCBTTEEEE
T ss_pred EecCH-HHHHHHHHCCCeec
Confidence 88875 45666777777543
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.25 E-value=9.4e-05 Score=67.80 Aligned_cols=64 Identities=9% Similarity=-0.006 Sum_probs=40.0
Q ss_pred CCChHHHHHHHHHcC-CCCCc--EEEEcCChHHHHHHHHcCCeEEEEeCCC-Cccccc---Ccc-eEeCChhh
Q 018088 257 ESMAHRFLSAAVKLD-RKPSK--CVVFEDDPRAITAAHNCTMMAVGLIGAH-RAYDLV---QAD-LAVANFNE 321 (361)
Q Consensus 257 ~~KP~~~~~~~~klg-i~p~~--~v~IGDs~~Di~aA~~aG~~~v~V~g~~-~~~~l~---~ad-~vi~sl~E 321 (361)
..|+..+..+++++| +++++ +++|||+.||+.|++.+|+. |++.... ....+. .|+ +++.+..+
T Consensus 188 ~~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~-va~~n~~~~~~~~~~~~~a~~~v~~~~~~ 259 (275)
T 1xvi_A 188 AGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYA-VIVKGLNREGVHLHDEDPARVWRTQREGP 259 (275)
T ss_dssp CCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEE-EECCCCC----------------------
T ss_pred CCHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCce-EEecCCCccchhhccccCCceeEccCCCc
Confidence 458899999999999 99999 99999999999999999986 5442222 123332 367 77766544
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00085 Score=60.06 Aligned_cols=63 Identities=13% Similarity=0.023 Sum_probs=49.5
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHc--CCeEEEEeCCCCcccccCcceEeCC---hhhhHHHHHHhh
Q 018088 257 ESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNC--TMMAVGLIGAHRAYDLVQADLAVAN---FNELSVINLRRL 330 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~a--G~~~v~V~g~~~~~~l~~ad~vi~s---l~EL~~~ll~~l 330 (361)
..|...+..+++++| +++|||+.||+.|.+.+ |.++++ ++. ...|++++.+ -+.+...+.+.+
T Consensus 159 ~~Kg~al~~l~~~~g-----via~GD~~ND~~Ml~~a~~g~~vam--~Na----~~~A~~v~~~~~~~~gV~~~l~~~~ 226 (239)
T 1u02_A 159 VNKGSAIRSVRGERP-----AIIAGDDATDEAAFEANDDALTIKV--GEG----ETHAKFHVADYIEMRKILKFIEMLG 226 (239)
T ss_dssp CCHHHHHHHHHTTSC-----EEEEESSHHHHHHHHTTTTSEEEEE--SSS----CCCCSEEESSHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhhCC-----eEEEeCCCccHHHHHHhhCCcEEEE--CCC----CCcceEEeCCCCCHHHHHHHHHHHH
Confidence 358899999999998 99999999999999999 987665 332 3568999988 555655555444
|
| >3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A | Back alignment and structure |
|---|
Probab=96.97 E-value=0.025 Score=50.54 Aligned_cols=90 Identities=17% Similarity=0.120 Sum_probs=66.1
Q ss_pred HHHHHHHHhhC-CCcEEEEeCCCHHHHHHHHHhCCCCccc--ceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcCCh
Q 018088 208 LQEWLDAVSSA-RIPCAVVSGLDRRKMVEALERMGLLKYF--QAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDP 284 (361)
Q Consensus 208 v~elL~~L~~~-Gi~vaivSn~~~~~~~~~L~~lgl~~~F--d~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGDs~ 284 (361)
+...|.....+ +.--++||++.-.-...++=-+|+..+| +.|+++-. .+|..+|..+.+++|- ...-++|||+.
T Consensus 164 a~k~L~~i~sr~~~vNVLVTs~qLVPaLaK~LLygL~~~fpieNIYSa~k--iGKesCFerI~~RFG~-k~~yvvIGDG~ 240 (274)
T 3geb_A 164 SLKALNLINSRPNCVNVLVTTTQLIPALAKVLLYGLGSVFPIENIYSATK--TGKESCFERIMQRFGR-KAVYVVIGDGV 240 (274)
T ss_dssp HHHHHHHHHHSTTEEEEEEESSCHHHHHHHHHHTTCTTTSCGGGEEETTT--TCHHHHHHHHHHHHCT-TSEEEEEESSH
T ss_pred HHHHHHhhccCCceeEEEEecCchHHHHHHHHHhhcccceecccccchhh--cCHHHHHHHHHHHhCC-CceEEEECCCH
Confidence 44455555443 3445678887554444444456888887 46887755 4699999999999984 46788999999
Q ss_pred HHHHHHHHcCCeEEEE
Q 018088 285 RAITAAHNCTMMAVGL 300 (361)
Q Consensus 285 ~Di~aA~~aG~~~v~V 300 (361)
..-++|+..+++.+-|
T Consensus 241 eEe~AAk~~n~PFwrI 256 (274)
T 3geb_A 241 EEEQGAKKHNMPFWRI 256 (274)
T ss_dssp HHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHcCCCeEEe
Confidence 9999999999997765
|
| >3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=96.88 E-value=0.00067 Score=65.10 Aligned_cols=80 Identities=18% Similarity=0.161 Sum_probs=65.9
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCc-ccc-eeEecCCCCCCChHHHHHHHHHc-CCCCCcEE
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLK-YFQ-AIVSEEDGMESMAHRFLSAAVKL-DRKPSKCV 278 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~-~Fd-~iv~~e~~~~~KP~~~~~~~~kl-gi~p~~~v 278 (361)
+...||+.++|+.+. .+++++|.|.+...++..+++.++... +|+ .+++.++.+. .|.+-++++ |.++++||
T Consensus 74 v~~RPg~~eFL~~l~-~~yeivI~Tas~~~yA~~vl~~LDp~~~~f~~ri~sr~~~g~----~~~KdL~~L~~~dl~~vi 148 (372)
T 3ef0_A 74 IKFRPGLAQFLQKIS-ELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDDSGS----LAQKSLRRLFPCDTSMVV 148 (372)
T ss_dssp EEECTTHHHHHHHHH-TTEEEEEECSSCHHHHHHHHHHHCTTSCSSSSCEECTTTSSC----SSCCCGGGTCSSCCTTEE
T ss_pred EEECcCHHHHHHHHh-cCcEEEEEeCCcHHHHHHHHHHhccCCceeeeEEEEecCCCC----cceecHHHhcCCCCceEE
Confidence 467999999999999 569999999999999999999999887 787 5776665432 233445655 99999999
Q ss_pred EEcCChHH
Q 018088 279 VFEDDPRA 286 (361)
Q Consensus 279 ~IGDs~~D 286 (361)
+|+|++.-
T Consensus 149 iiDd~~~~ 156 (372)
T 3ef0_A 149 VIDDRGDV 156 (372)
T ss_dssp EEESCSGG
T ss_pred EEeCCHHH
Confidence 99999863
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=96.70 E-value=0.00036 Score=63.33 Aligned_cols=60 Identities=3% Similarity=-0.151 Sum_probs=44.7
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEcC----ChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChh
Q 018088 257 ESMAHRFLSAAVKLDRKPSKCVVFED----DPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFN 320 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p~~~v~IGD----s~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~ 320 (361)
..|...+..+ +|++++++++||| +.||++|.+.+|...++| ++........|++++.+..
T Consensus 196 vsKg~al~~l---~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av-~NA~~~~k~~a~~v~~~~~ 259 (262)
T 2fue_A 196 WDKRYCLDSL---DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSV-VSPQDTVQRCREIFFPETA 259 (262)
T ss_dssp CSTTHHHHHH---TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEEC-SSHHHHHHHHHHHHCTTC-
T ss_pred CCHHHHHHHH---HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEe-cCCCHHHHHhhheeCCCCc
Confidence 4588888888 9999999999999 999999999999866666 3333333344666665543
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=96.53 E-value=0.0028 Score=52.38 Aligned_cols=40 Identities=15% Similarity=0.008 Sum_probs=32.5
Q ss_pred CCccHHHHHHHHhhCCCcEEEEeCCC---HHHHHHHHHhCCCC
Q 018088 204 PMEGLQEWLDAVSSARIPCAVVSGLD---RRKMVEALERMGLL 243 (361)
Q Consensus 204 ~~pgv~elL~~L~~~Gi~vaivSn~~---~~~~~~~L~~lgl~ 243 (361)
+.|++.+.|+.|+++|++++++|+.+ ...+...++.+|+.
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~ 67 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE 67 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCC
Confidence 45789999999999999999999986 44556667777773
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=96.32 E-value=0.0039 Score=56.10 Aligned_cols=31 Identities=23% Similarity=0.287 Sum_probs=23.9
Q ss_pred ccHHHHHHHHhhCCCcEEEEeCCCHHHHHHH
Q 018088 206 EGLQEWLDAVSSARIPCAVVSGLDRRKMVEA 236 (361)
Q Consensus 206 pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~ 236 (361)
+...+.|++|+++|++++++|+.+...+...
T Consensus 24 ~~~~~~l~~l~~~g~~~~iaTGR~~~~~~~~ 54 (246)
T 3f9r_A 24 DEMRALIKRARGAGFCVGTVGGSDFAKQVEQ 54 (246)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSCHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCHHHHHHH
Confidence 3455668899999999999999987754433
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=95.91 E-value=0.006 Score=48.99 Aligned_cols=29 Identities=14% Similarity=0.097 Sum_probs=24.7
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHH
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRR 231 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~ 231 (361)
.+.+++.+.|+.|+++|++++++|+....
T Consensus 24 ~~~~~~~~~l~~l~~~Gi~~~iaTGR~~~ 52 (126)
T 1xpj_A 24 LPRLDVIEQLREYHQLGFEIVISTARNMR 52 (126)
T ss_dssp CBCHHHHHHHHHHHHTTCEEEEEECTTTT
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEeCCChh
Confidence 45678889999999999999999997643
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=95.75 E-value=0.0091 Score=54.36 Aligned_cols=37 Identities=22% Similarity=0.408 Sum_probs=32.6
Q ss_pred HHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCc
Q 018088 208 LQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLK 244 (361)
Q Consensus 208 v~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~ 244 (361)
..+.|++|+++|++++++|+.....+...++.+++..
T Consensus 31 ~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 67 (275)
T 1xvi_A 31 AAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQG 67 (275)
T ss_dssp THHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCC
Confidence 3577888999999999999999999999999998864
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=94.92 E-value=0.0016 Score=58.21 Aligned_cols=41 Identities=7% Similarity=-0.075 Sum_probs=32.8
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEcC----ChHHHHHHHHcCCeEEEE
Q 018088 257 ESMAHRFLSAAVKLDRKPSKCVVFED----DPRAITAAHNCTMMAVGL 300 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p~~~v~IGD----s~~Di~aA~~aG~~~v~V 300 (361)
..|...+..+ +|++++++++||| +.||++|.+.+|...++|
T Consensus 187 ~~Kg~al~~l---~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av 231 (246)
T 2amy_A 187 WDKRYCLRHV---ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSV 231 (246)
T ss_dssp CSGGGGGGGT---TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEEC
T ss_pred CchHHHHHHH---hCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEe
Confidence 3577777777 8999999999999 999999999999755665
|
| >3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=94.66 E-value=0.021 Score=55.64 Aligned_cols=79 Identities=16% Similarity=0.156 Sum_probs=62.8
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCc-ccce-eEecCCCCCCChHHHHHHHHH-cCCCCCcEE
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLK-YFQA-IVSEEDGMESMAHRFLSAAVK-LDRKPSKCV 278 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~-~Fd~-iv~~e~~~~~KP~~~~~~~~k-lgi~p~~~v 278 (361)
+...||+.++|+.+.+ .|+++|.|.+...++..+++.++... +|.. +++.+..+.. +.+-+.+ +|.+.+++|
T Consensus 82 V~~RPgl~eFL~~ls~-~yEivIfTas~~~YA~~Vl~~LDp~~~~f~~Rl~sRd~cg~~----~~KdL~~ll~rdl~~vv 156 (442)
T 3ef1_A 82 IKFRPGLAQFLQKISE-LYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDDSGSL----AQKSLRRLFPCDTSMVV 156 (442)
T ss_dssp EEECTTHHHHHHHHTT-TEEEEEECSSCHHHHHHHHHHHCTTSTTTTTCEECTTTSSCS----SCCCGGGTCSSCCTTEE
T ss_pred EEeCCCHHHHHHHHhC-CcEEEEEcCCCHHHHHHHHHHhccCCccccceEEEecCCCCc----eeeehHHhcCCCcceEE
Confidence 4679999999999995 59999999999999999999998877 7876 6666654321 2222343 388999999
Q ss_pred EEcCChH
Q 018088 279 VFEDDPR 285 (361)
Q Consensus 279 ~IGDs~~ 285 (361)
+|+|++.
T Consensus 157 IIDd~p~ 163 (442)
T 3ef1_A 157 VIDDRGD 163 (442)
T ss_dssp EEESCSG
T ss_pred EEECCHH
Confidence 9999985
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=94.48 E-value=0.038 Score=49.29 Aligned_cols=35 Identities=6% Similarity=-0.008 Sum_probs=30.2
Q ss_pred HHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCc
Q 018088 210 EWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLK 244 (361)
Q Consensus 210 elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~ 244 (361)
+.|+.|+++|++++++|+.+...+...++.+|+..
T Consensus 24 ~~l~~l~~~g~~~~i~Tgr~~~~~~~~~~~~~~~~ 58 (249)
T 2zos_A 24 PIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVET 58 (249)
T ss_dssp HHHHHHHHTTEEEEEBCSSCHHHHHHHHHHHTCCS
T ss_pred HHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCc
Confidence 46777889999999999999999999999888753
|
| >3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=94.38 E-value=0.0062 Score=57.18 Aligned_cols=94 Identities=13% Similarity=0.092 Sum_probs=66.9
Q ss_pred CCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCccc--ceeEecCC-CCC---CC--hHHHHHHHHHc-----
Q 018088 204 PMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYF--QAIVSEED-GME---SM--AHRFLSAAVKL----- 270 (361)
Q Consensus 204 ~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~F--d~iv~~e~-~~~---~K--P~~~~~~~~kl----- 270 (361)
..||+.++|+.+.+. +.++|.|.+...++..+++.++....+ ...+..+. ... .+ +..|.+-++.+
T Consensus 165 ~RP~l~eFL~~l~~~-yeivIfTas~~~ya~~vld~Ld~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~vKdLs~Lw~~~p 243 (320)
T 3shq_A 165 MRPYLHEFLTSAYED-YDIVIWSATSMRWIEEKMRLLGVASNDNYKVMFYLDSTAMISVHVPERGVVDVKPLGVIWALYK 243 (320)
T ss_dssp BCTTHHHHHHHHHHH-EEEEEECSSCHHHHHHHHHHTTCTTCSSCCCCEEECGGGCEEEEETTTEEEEECCHHHHHHHCT
T ss_pred eCCCHHHHHHHHHhC-CEEEEEcCCcHHHHHHHHHHhCCCCCcceeEEEEEcCCccccccccCCCCEEEEEhHHhhcccC
Confidence 589999999999966 999999999999999999999876553 22121111 100 11 11244445555
Q ss_pred CCCCCcEEEEcCChHHHHHHHHcCCeEE
Q 018088 271 DRKPSKCVVFEDDPRAITAAHNCTMMAV 298 (361)
Q Consensus 271 gi~p~~~v~IGDs~~Di~aA~~aG~~~v 298 (361)
|.++++||+|+|++.-..+....|+...
T Consensus 244 ~rdl~~tIiIDdsp~~~~~~p~NgI~I~ 271 (320)
T 3shq_A 244 QYNSSNTIMFDDIRRNFLMNPKSGLKIR 271 (320)
T ss_dssp TCCGGGEEEEESCGGGGTTSGGGEEECC
T ss_pred CCChhHEEEEeCChHHhccCcCceEEeC
Confidence 8899999999999987776666665543
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=93.22 E-value=0.32 Score=43.31 Aligned_cols=83 Identities=17% Similarity=0.182 Sum_probs=56.6
Q ss_pred CccHHHHHHHHhhCCCcEEEEeCCCH---HHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEc
Q 018088 205 MEGLQEWLDAVSSARIPCAVVSGLDR---RKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFE 281 (361)
Q Consensus 205 ~pgv~elL~~L~~~Gi~vaivSn~~~---~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IG 281 (361)
.|++.+.|+.|+++|++++++||... ......++.+|+....+.++++. ......+++. ....++.++|
T Consensus 19 ~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~~~~~~i~~~~-------~~~~~~l~~~-~~~~~v~viG 90 (263)
T 1zjj_A 19 IPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGIDVSSSIIITSG-------LATRLYMSKH-LDPGKIFVIG 90 (263)
T ss_dssp CTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCCCCGGGEEEHH-------HHHHHHHHHH-SCCCCEEEES
T ss_pred CccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEEecH-------HHHHHHHHHh-CCCCEEEEEc
Confidence 57899999999999999999999764 44445555678865566677652 2233333333 2346788888
Q ss_pred CChHHHHHHHHcCCe
Q 018088 282 DDPRAITAAHNCTMM 296 (361)
Q Consensus 282 Ds~~Di~aA~~aG~~ 296 (361)
+. .....++..|+.
T Consensus 91 ~~-~l~~~l~~~G~~ 104 (263)
T 1zjj_A 91 GE-GLVKEMQALGWG 104 (263)
T ss_dssp CH-HHHHHHHHHTSC
T ss_pred CH-HHHHHHHHcCCe
Confidence 74 556777777774
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=92.19 E-value=0.13 Score=45.51 Aligned_cols=37 Identities=14% Similarity=0.115 Sum_probs=30.1
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhC
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERM 240 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~l 240 (361)
.+.+...+.|++|+++| +++++|+.+...+...++.+
T Consensus 23 ~i~~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~~~~l 59 (239)
T 1u02_A 23 YADAGLLSLISDLKERF-DTYIVTGRSPEEISRFLPLD 59 (239)
T ss_dssp CCCHHHHHHHHHHHHHS-EEEEECSSCHHHHHHHSCSS
T ss_pred CCCHHHHHHHHHHhcCC-CEEEEeCCCHHHHHHHhccc
Confidence 34566778899999999 99999999888877776554
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=90.19 E-value=0.069 Score=47.74 Aligned_cols=40 Identities=5% Similarity=-0.106 Sum_probs=33.5
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEcCC----hHHHHHHHHcCCeEEEE
Q 018088 257 ESMAHRFLSAAVKLDRKPSKCVVFEDD----PRAITAAHNCTMMAVGL 300 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p~~~v~IGDs----~~Di~aA~~aG~~~v~V 300 (361)
..|...+..+++ +++++++|||+ .||++|.+.+|.-.++|
T Consensus 186 v~Kg~al~~L~~----~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v 229 (246)
T 3f9r_A 186 WDKTYCLQFVED----DFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKV 229 (246)
T ss_dssp CSGGGGGGGTTT----TCSEEEEEESCCSTTSTTHHHHTCTTSEEEEC
T ss_pred CCHHHHHHHHHc----CcccEEEEeCCCCCCCCCHHHHhCCCccEEEe
Confidence 458888887777 89999999995 99999999998665665
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=87.08 E-value=0.9 Score=40.17 Aligned_cols=48 Identities=10% Similarity=0.247 Sum_probs=38.1
Q ss_pred CccHHHHHHHHhhCCCcEEEEeC---CCHHHHHHHHHhCCCCcccceeEec
Q 018088 205 MEGLQEWLDAVSSARIPCAVVSG---LDRRKMVEALERMGLLKYFQAIVSE 252 (361)
Q Consensus 205 ~pgv~elL~~L~~~Gi~vaivSn---~~~~~~~~~L~~lgl~~~Fd~iv~~ 252 (361)
.|++.+.|++++++|++++++|| .....+...++.+|+....+.+++.
T Consensus 24 ~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~~~~~ii~~ 74 (266)
T 3pdw_A 24 IEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPATEEQVFTT 74 (266)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCCCGGGEEEH
T ss_pred CccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHHHccCH
Confidence 45677899999999999999998 5667778888889986555556553
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=84.74 E-value=1 Score=39.84 Aligned_cols=48 Identities=13% Similarity=0.262 Sum_probs=39.2
Q ss_pred CccHHHHHHHHhhCCCcEEEEeC---CCHHHHHHHHHhCCCCcccceeEec
Q 018088 205 MEGLQEWLDAVSSARIPCAVVSG---LDRRKMVEALERMGLLKYFQAIVSE 252 (361)
Q Consensus 205 ~pgv~elL~~L~~~Gi~vaivSn---~~~~~~~~~L~~lgl~~~Fd~iv~~ 252 (361)
.|++.+.|++++++|++++++|| .....+...++.+|+....+.+++.
T Consensus 23 i~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~~~~ii~~ 73 (264)
T 3epr_A 23 IPAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETPLETIYTA 73 (264)
T ss_dssp CHHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCCGGGEEEH
T ss_pred CcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhheecH
Confidence 37899999999999999999995 5667778888889987666666664
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=82.48 E-value=0.38 Score=42.37 Aligned_cols=30 Identities=10% Similarity=0.057 Sum_probs=19.5
Q ss_pred CCceEEEEece-eccccHHHHHHHHHHHHHH
Q 018088 117 DEAYGLIFSWD-VVADTRALKLNAWKQLAFE 146 (361)
Q Consensus 117 ~~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~ 146 (361)
+++|+|+||+| ||++....+.+...+++++
T Consensus 4 ~~~kli~~DlDGTLl~~~~~i~~~~~~al~~ 34 (246)
T 2amy_A 4 PGPALCLFDVDGTLTAPRQKITKEMDDFLQK 34 (246)
T ss_dssp CCSEEEEEESBTTTBCTTSCCCHHHHHHHHH
T ss_pred CCceEEEEECCCCcCCCCcccCHHHHHHHHH
Confidence 34799999999 9998654333333444433
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=81.25 E-value=2.2 Score=38.31 Aligned_cols=40 Identities=8% Similarity=0.136 Sum_probs=34.8
Q ss_pred CccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCc
Q 018088 205 MEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLK 244 (361)
Q Consensus 205 ~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~ 244 (361)
.+...+.|++|+++|++++++|+.+...+...++.+++..
T Consensus 24 ~~~~~~aL~~l~~~Gi~vviaTGR~~~~~~~~~~~l~l~~ 63 (282)
T 1rkq_A 24 SPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQ 63 (282)
T ss_dssp CHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCS
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 4556688999999999999999999999999999998865
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 361 | ||||
| d1te2a_ | 218 | c.108.1.6 (A:) Phosphatase YniC {Escherichia coli | 1e-10 | |
| d1o08a_ | 221 | c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcu | 2e-10 | |
| d1zs9a1 | 253 | c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapien | 4e-09 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 5e-09 | |
| d1cr6a1 | 222 | c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal | 1e-08 | |
| d1zd3a1 | 225 | c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal | 3e-08 | |
| d1swva_ | 257 | c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Ba | 3e-08 | |
| d2hsza1 | 224 | c.108.1.6 (A:1-224) Phosphoglycolate phosphatase G | 7e-07 | |
| d2ah5a1 | 210 | c.108.1.6 (A:1-210) predicted phosphatase SP0104 { | 4e-06 | |
| d2go7a1 | 204 | c.108.1.6 (A:3-206) Hypothetical protein SP2064 {S | 7e-06 | |
| d2fdra1 | 222 | c.108.1.6 (A:3-224) Hypothetical protein Atu0790 { | 9e-06 | |
| d2b0ca1 | 197 | c.108.1.2 (A:8-204) Putative phosphatase YihX {Esc | 3e-05 | |
| d1qq5a_ | 245 | c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xan | 0.001 | |
| d2fi1a1 | 187 | c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Str | 0.002 | |
| d1zrna_ | 220 | c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pse | 0.003 | |
| d2hdoa1 | 207 | c.108.1.6 (A:1-207) Phosphoglycolate phosphatase { | 0.004 |
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} Length = 218 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Score = 58.3 bits (139), Expect = 1e-10
Identities = 38/211 (18%), Positives = 72/211 (34%), Gaps = 5/211 (2%)
Query: 122 LIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEE 180
IF D ++ D+ L A + G +I + ++ + V
Sbjct: 6 AIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRNELPDTLGLRIDMVVDLWYARQPWNG 65
Query: 181 SELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERM 240
+ R+ + + G++E + + + S + + L
Sbjct: 66 PSRQEVVERVIARAISLVEETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMF 125
Query: 241 GLLKYFQAIVSEEDGMESMAHR--FLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAV 298
L F A+ S E S H +L A KL P CV ED + A+ M ++
Sbjct: 126 DLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSI 185
Query: 299 GLIGAHRAYDL--VQADLAVANFNELSVINL 327
+ D V A++ +++ EL+ +L
Sbjct: 186 VVPAPEAQNDPRFVLANVKLSSLTELTAKDL 216
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} Length = 221 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Score = 58.3 bits (139), Expect = 2e-10
Identities = 41/220 (18%), Positives = 79/220 (35%), Gaps = 10/220 (4%)
Query: 121 GLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKE 179
++F D V+ DT AWK LA E G Q+ + L K+L +
Sbjct: 4 AVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDR-QFNEQLKGVSREDSLQKILDLADK 62
Query: 180 ESELDRLNSRLTQL-----YYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMV 234
+ + + +S + G+ + L + S +I A+ S +
Sbjct: 63 KVSAEEFKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASKNGPFL 122
Query: 235 EALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCT 294
+ A +E + F++AA + PS+ + ED I A +
Sbjct: 123 LERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSG 182
Query: 295 MMAVGLIGAHRAYDLVQADLAVANFNELSVINLRRLFANK 334
+ +G+ R DL + V + + ++ L+ ++ K
Sbjct: 183 ALPIGV---GRPEDLGDDIVIVPDTSHYTLEFLKEVWLQK 219
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Score = 54.4 bits (129), Expect = 4e-09
Identities = 24/241 (9%), Positives = 62/241 (25%), Gaps = 9/241 (3%)
Query: 88 DGPLKVDVDFLNDRLQEGFLKRIRYAMKPDEAYGLIFSWDVVADTRALKLNAWKQLAFEE 147
+G + F+ D L + ++ ++ + V+ R
Sbjct: 15 EGTT-TPIAFVKDILFPYIEENVKEYLQ--THWEEEECQQDVSLLRKQAEEDAHLDGAVP 71
Query: 148 GKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLYYDNLLSVTEPMEG 207
G Q + + + ++ + L +L + + + E
Sbjct: 72 IPAASGNGVDDLQQMIQAVVDNVCWQMSLDRKTTALKQLQGHMWRAAFTAGRMKAEFFAD 131
Query: 208 LQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYF---QAIVSEEDGMESMAHRFL 264
+ + A + + S + G + + +
Sbjct: 132 VVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKIGHKVESESYR 191
Query: 265 SAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLI---GAHRAYDLVQADLAVANFNE 321
A + + + D R +AA + ++ A D + +F+E
Sbjct: 192 KIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITSFSE 251
Query: 322 L 322
L
Sbjct: 252 L 252
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 54.8 bits (131), Expect = 5e-09
Identities = 50/366 (13%), Positives = 112/366 (30%), Gaps = 64/366 (17%)
Query: 17 LIPSRPTLSSAHHLFF--PSTLKLSKFKRLVIRNAC--------GFDENGSFNGFPITPN 66
L+ + L H+ + + + + + + G + N + +
Sbjct: 29 LLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDMLFIVFSIH 88
Query: 67 KLFMQEAIGAEYGEGFETFRQDGPLKVDVDFLNDRLQEGFLKRIRYAMKPDEAYGLIFSW 126
+ + + + + E F + V++ N + + +
Sbjct: 89 LIDILKKLSHDEIEAFMYQDE----PVELKLQNISTNLADCFNLNEQLP-------LQFL 137
Query: 127 DVVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLL----WGKEESE 182
D V + A ++ A E L+ L A V + L + E +
Sbjct: 138 DNVKVGKNNIYAALEEFATTELHVSDATLFSLKGALWTLAQEVYQEWYLGSKLYEDVEKK 197
Query: 183 LDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGL 242
+ R + +Y + +L P++ ++ L+ + A + +G + V E +GL
Sbjct: 198 IARTTFKTGYIYQEIIL---RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGL 254
Query: 243 LKYFQAIV---------SEEDGMESMAHR------FLSAAVKLD--------------RK 273
L YF+A +E ++ +++A +
Sbjct: 255 LPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVN 314
Query: 274 PSKCVVFEDDPRAITAAHNCTMMAV----GLIGAHRAYDLVQ--ADLAVANFNELSVINL 327
+ D + +A + GL G A +L AD + + EL + L
Sbjct: 315 KDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGELRGV-L 373
Query: 328 RRLFAN 333
L +
Sbjct: 374 DNLLEH 379
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 222 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Score = 52.4 bits (124), Expect = 1e-08
Identities = 20/198 (10%), Positives = 56/198 (28%), Gaps = 6/198 (3%)
Query: 125 SWDVVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELD 184
++ + AL + E E P E + +I + ++ + + +
Sbjct: 19 AFRRSEEALALPRDFLLGAYQTEFPEGPTEQLMKGKITFSQWVPLMDESYRKSSKACGAN 78
Query: 185 RLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRK----MVEALERM 240
+ + ++ + + A+ +V+ A
Sbjct: 79 LPENFSISQIFSQAMAARSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMC 138
Query: 241 GLLKYFQAIVSEEDGMES--MAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAV 298
L ++F ++ + L KP++ V +D + A + M+ +
Sbjct: 139 ELSQHFDFLIESCQVGMIKPEPQIYNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTI 198
Query: 299 GLIGAHRAYDLVQADLAV 316
+ A ++
Sbjct: 199 LVHNTASALRELEKVTGT 216
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.3 bits (121), Expect = 3e-08
Identities = 21/197 (10%), Positives = 58/197 (29%), Gaps = 6/197 (3%)
Query: 126 WDVVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDR 185
+ AL + G E + +I + ++ + E +++
Sbjct: 22 LGRTEEALALPRGLLNDAFQKGGPEGATTRLMKGEITLSQWIPLMEENCRKCSETAKVCL 81
Query: 186 LNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVE----ALERMG 241
+ + +D +S + + + + A+++ E A
Sbjct: 82 PKNFSIKEIFDKAISARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCE 141
Query: 242 LLKYFQAIVSEEDGMESMAHRFLSAAVK--LDRKPSKCVVFEDDPRAITAAHNCTMMAVG 299
L +F ++ + + L PS+ V +D + A + M+ +
Sbjct: 142 LKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTIL 201
Query: 300 LIGAHRAYDLVQADLAV 316
+ A ++ +
Sbjct: 202 VQDTDTALKELEKVTGI 218
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Score = 51.7 bits (122), Expect = 3e-08
Identities = 32/220 (14%), Positives = 69/220 (31%), Gaps = 17/220 (7%)
Query: 121 GLIFSWD-VVADTRAL-KLNAWKQLAFEEGKEIPQE----------GDVLRQILNAGA-D 167
+IF+W D L + ++ + G I E D +R +
Sbjct: 4 AVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARKPMGLLKIDHVRALTEMPRIA 63
Query: 168 HVLHKVLLWGKEESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSG 227
++V E+++ + ++ + L P+ G++E + ++ I +G
Sbjct: 64 SEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGSTTG 123
Query: 228 LDR---RKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLD-RKPSKCVVFEDD 283
R + + G F + A++L + + D
Sbjct: 124 YTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGDT 183
Query: 284 PRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNELS 323
+ N M VG+I L + ++ + EL
Sbjct: 184 VSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELR 223
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} Length = 224 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Score = 47.2 bits (110), Expect = 7e-07
Identities = 35/214 (16%), Positives = 77/214 (35%), Gaps = 14/214 (6%)
Query: 122 LIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEE 180
+ F D + ++ + + E +++ + GAD + + + W ++
Sbjct: 7 IGFDLDGTLVNSLPDLALSINSALKDVNLPQASE-NLVMTWIGNGADVLSQRAVDWACKQ 65
Query: 181 S-------ELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKM 233
+ E + Y +NL +++ ++E L+A+ + AVV+ + +
Sbjct: 66 AEKELTEDEFKYFKRQFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHV 125
Query: 234 VEALERMGLLKYFQAIV--SEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAH 291
L G+ F ++ ++ F K P + + D I AAH
Sbjct: 126 QPILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAH 185
Query: 292 NCTMMAVGL-IGAHRAYDLVQ--ADLAVANFNEL 322
+ VGL G + + Q D +F ++
Sbjct: 186 SAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADI 219
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Score = 44.8 bits (104), Expect = 4e-06
Identities = 28/206 (13%), Positives = 56/206 (27%), Gaps = 10/206 (4%)
Query: 121 GLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKE 179
+ F D + D+ NA+ E G P +R + + L +
Sbjct: 6 AIFFDLDGTLVDSSIGIHNAFTYTFKELGVPSPDA-KTIRGFMGPPLESSFATCLSKDQI 64
Query: 180 ESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALER 239
+ S + ++ L+E P + + D + +
Sbjct: 65 SEAVQIYRSYYKAKGIYEAQLFPQIIDLLEELSS-----SYPLYITTTKDTSTAQDMAKN 119
Query: 240 MGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVG 299
+ + +F I A A P + ++ D + A + +
Sbjct: 120 LEIHHFFDGIYGSSPEAPHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLA 179
Query: 300 LI-GAHRAYDL--VQADLAVANFNEL 322
+ G DL Q D E+
Sbjct: 180 ITWGFGEQADLLNYQPDYIAHKPLEV 205
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} Length = 204 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Score = 44.0 bits (102), Expect = 7e-06
Identities = 18/195 (9%), Positives = 46/195 (23%), Gaps = 4/195 (2%)
Query: 122 LIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEE 180
I+ D + D+ L+ ++ + +E V I +L +V +
Sbjct: 4 FIWDLDGTLLDSYEAILSGIEETFAQFSIPYDKE-KVREFIFKYSVQDLLVRVAEDRNLD 62
Query: 181 SELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERM 240
E+ + + + + + A S + + +
Sbjct: 63 VEVLNQVRAQSLAEKNAQVVLMPGAR--EVLAWADESGIQQFIYTHKGNNAFTILKDLGV 120
Query: 241 GLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGL 300
+ K D + A N + ++
Sbjct: 121 ESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINF 180
Query: 301 IGAHRAYDLVQADLA 315
+ + + LA
Sbjct: 181 LESTYEGNHRIQALA 195
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} Length = 222 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Score = 44.1 bits (102), Expect = 9e-06
Identities = 36/209 (17%), Positives = 55/209 (26%), Gaps = 8/209 (3%)
Query: 122 LIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEE 180
+IF D V+ D+ + +L E G I E R + +L
Sbjct: 5 IIFDCDGVLVDSEIIAAQVESRLLTEAGYPISVEEMGERFAGMTWKNILLQVESEASIPL 64
Query: 181 SELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERM 240
S S + LD L+
Sbjct: 65 SASLLDKSEKLLDMRLERDVKIIDGVKFALSRLTTPRCICSNSSSHRLDMMLTKVGLKPY 124
Query: 241 GLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGL 300
+ A D ++ FL A + P + VV ED I A M +G
Sbjct: 125 FAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGF 184
Query: 301 IGAHRAYDL-------VQADLAVANFNEL 322
GA Y A+ ++ +L
Sbjct: 185 TGASHTYPSHADRLTDAGAETVISRMQDL 213
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} Length = 197 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Score = 42.4 bits (98), Expect = 3e-05
Identities = 27/186 (14%), Positives = 55/186 (29%), Gaps = 13/186 (6%)
Query: 123 IFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEES 181
IF V+ D ++ + + IP + + A H + + + +
Sbjct: 4 IFDLGNVIVDIDFNRVLGA----WSDLTRIPLA-SLKKSFHMGEAFHQHERGEISDEAFA 58
Query: 182 ELDRLNSRLT----QLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEAL 237
E L Q + + + + V+S +R
Sbjct: 59 EALCHEMALPLSYEQFSHGWQAVFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWP 118
Query: 238 ERM-GLLKYFQAIV-SEEDGMESMAHRFLSAAV-KLDRKPSKCVVFEDDPRAITAAHNCT 294
E + I S++ GM R + PS V F+D+ I A+
Sbjct: 119 EEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLG 178
Query: 295 MMAVGL 300
+ ++ +
Sbjct: 179 ITSILV 184
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} Length = 245 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Score = 37.8 bits (86), Expect = 0.001
Identities = 18/188 (9%), Positives = 49/188 (26%), Gaps = 9/188 (4%)
Query: 121 GLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDV----LRQILNAGADHVLHKVLL 175
++F + D +++ +A ++ G+ I Q + + +
Sbjct: 4 AVVFDAYGTLFDVQSV-ADATERAYPGRGEYITQVWRQKQLEYSWLRALMGRYADFWSVT 62
Query: 176 WGKEESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVE 235
L L + + ++ + + ++ + M++
Sbjct: 63 REALAYTLGTLGLEPDESFLADMAQAYNRLTPYPDAAQCLAELAPLKRAILSNGAPDMLQ 122
Query: 236 ALERMGLLKYFQAIVSEEDGMESMAHR---FLSAAVKLDRKPSKCVVFEDDPRAITAAHN 292
AL L V D + L P++ + + + A N
Sbjct: 123 ALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKN 182
Query: 293 CTMMAVGL 300
+
Sbjct: 183 FGFSVARV 190
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} Length = 187 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Score = 37.0 bits (84), Expect = 0.002
Identities = 24/193 (12%), Positives = 47/193 (24%), Gaps = 16/193 (8%)
Query: 114 MKPDEAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHK 172
MK I+ + D A+ + G + ++
Sbjct: 1 MKYH---DYIWDLGGTLLDNYETSTAAFVETLALYGITQDHDSVYQALKVSTPFAIETFA 57
Query: 173 VLLWGKEESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRK 232
L E + L EG+ + L+ +S+ +VS + +
Sbjct: 58 PNLENFLEKYKE---------NEARELEHPILFEGVSDLLEDISNQGGRHFLVSHRNDQV 108
Query: 233 MVEALERMGLLKYFQAIVSEEDGMESM-AHRFLSAAVKLDRKPSKCVVFEDDPRAITAAH 291
+ + + + + S L K S +V D P I A
Sbjct: 109 LEILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQ--ISSGLVIGDRPIDIEAGQ 166
Query: 292 NCTMMAVGLIGAH 304
+
Sbjct: 167 AAGLDTHLFTSIV 179
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} Length = 220 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Score = 36.4 bits (82), Expect = 0.003
Identities = 27/214 (12%), Positives = 59/214 (27%), Gaps = 13/214 (6%)
Query: 121 GLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQ-------EGDVLRQILNAGADHVLHK 172
G+ F + D ++ + + G+EI E LR ++N +
Sbjct: 4 GIAFDLYGTLFDVHSV-VGRCDEAFPGRGREISALWRQKQLEYTWLRSLMNRYVNFQQAT 62
Query: 173 VLLWGKEESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRK 232
L T+ + P + + L + + A++S +
Sbjct: 63 EDALRFTCRHLGLDLDARTRSTLCDAYLRLAPFSEVPDSLRELKRRGLKLAILSNGSPQS 122
Query: 233 MVEALERMGLLKYFQAIVSEEDGMESMAH--RFLSAAVKLDRKPSKCVVFEDDPRAITAA 290
+ + GL F ++S + + A L S + + T A
Sbjct: 123 IDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAILFVASNAWDATGA 182
Query: 291 HNCTMMAVGLIGAHRAYDL--VQADLAVANFNEL 322
+ ++ D V + +
Sbjct: 183 RYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAV 216
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} Length = 207 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Score = 36.0 bits (81), Expect = 0.004
Identities = 18/204 (8%), Positives = 54/204 (26%), Gaps = 7/204 (3%)
Query: 121 GLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKE 179
L+F D + +++ +++ GK ++ A+ + ++ + E
Sbjct: 5 ALMFDIDGTLTNSQPAYTTVMREVLATYGKPFSPA--QAQKTFPMAAEQAMTELGIAASE 62
Query: 180 ESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALER 239
+ +YD + ++ + R+ + +
Sbjct: 63 FDHFQAQYEDVMASHYDQIELYPGITSLFEQLPSEL---RLGIVTSQRRNELESGMRSYP 119
Query: 240 MGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVG 299
+ + + L+A K++ P + D A +
Sbjct: 120 FMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGL 179
Query: 300 -LIGAHRAYDLVQADLAVANFNEL 322
+ G D + ++
Sbjct: 180 AVWGMDPNADHQKVAHRFQKPLDI 203
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 361 | |||
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 99.97 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 99.96 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 99.96 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 99.96 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 99.95 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 99.95 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 99.94 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 99.94 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 99.94 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 99.93 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 99.93 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 99.91 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 99.9 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 99.9 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 99.87 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 99.81 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 99.81 | |
| d2g80a1 | 225 | Protein UTR4 {Baker's yeast (Saccharomyces cerevis | 99.81 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.79 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.77 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 99.77 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 99.75 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 99.73 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 99.68 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 99.67 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 99.64 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.59 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 99.59 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 99.5 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 99.5 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 99.49 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 99.48 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 99.4 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.19 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.11 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.08 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.05 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 98.94 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 98.91 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.85 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 98.77 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.76 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 98.72 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.7 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.6 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.52 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 98.4 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 98.32 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.23 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.04 | |
| d1q92a_ | 195 | 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo | 97.94 | |
| d2bdea1 | 458 | Cytosolic IMP-GMP specific 5'-nucleotidase {Legion | 97.73 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 97.57 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 96.3 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 96.06 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 95.68 | |
| d1ta0a_ | 181 | Carboxy-terminal domain RNA polymerase II polypept | 95.68 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 93.07 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 86.46 |
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=99.97 E-value=2.3e-30 Score=229.30 Aligned_cols=205 Identities=18% Similarity=0.221 Sum_probs=162.4
Q ss_pred CceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHcc-CCChHHHHHHHHHHHHHHH
Q 018088 118 EAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLW-GKEESELDRLNSRLTQLYY 195 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~-~~~~~~~~~l~~~~~~~~~ 195 (361)
.+++||||+| ||+|++..+.++|.++++++|++.+....+ ..+.+......+...... ...............+.+.
T Consensus 2 ~i~a~iFD~DGTL~dt~~~~~~a~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (218)
T d1te2a_ 2 QILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRNEL-PDTLGLRIDMVVDLWYARQPWNGPSRQEVVERVIARAI 80 (218)
T ss_dssp CCCEEEECCBTTTBCCHHHHHHHHHHHHHHTTCCGGGGGGS-CCCTTCCHHHHHHHHHHHSCCSSSCHHHHHHHHHHHHH
T ss_pred cceEEEECCCCcccCCHHHHHHHHHHHHHHcCCCCCHHHHH-HHHhCCCccchhhhhhhcccccchhHHHHHHHHHHHHH
Confidence 4899999999 999999999999999999999876544322 233455555544443322 2222223334444444444
Q ss_pred HhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCCh--HHHHHHHHHcCCC
Q 018088 196 DNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMA--HRFLSAAVKLDRK 273 (361)
Q Consensus 196 ~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP--~~~~~~~~klgi~ 273 (361)
+.......++||+.++|+.|+++|++++|+||+.+..+...++.+|+.++|+.++++++++.+|| ++|..+++++|++
T Consensus 81 ~~~~~~~~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~ 160 (218)
T d1te2a_ 81 SLVEETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVD 160 (218)
T ss_dssp HHHHHHCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSC
T ss_pred HhhhccccccchHHHHHHHhhhccccccccccccccccccccccccccccccccccccccccchhhHHHHHHHHHHcCCC
Confidence 44444457799999999999999999999999999999999999999999999999999877775 7999999999999
Q ss_pred CCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcc--cccCcceEeCChhhhH
Q 018088 274 PSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAY--DLVQADLAVANFNELS 323 (361)
Q Consensus 274 p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~--~l~~ad~vi~sl~EL~ 323 (361)
|++|++|||+.+|+.+|+++|+.+|+|.+..... ....||++++++.||.
T Consensus 161 ~~~~l~igD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i~~l~el~ 212 (218)
T d1te2a_ 161 PLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELT 212 (218)
T ss_dssp GGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGCC
T ss_pred chhcEEEeeCHHHHHHHHHcCCEEEEECCCCCccchhhcCCCEEECChhhCC
Confidence 9999999999999999999999999995543322 2357999999999985
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=99.96 E-value=4.5e-29 Score=219.75 Aligned_cols=201 Identities=12% Similarity=0.203 Sum_probs=166.5
Q ss_pred CceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHHHHHHHHH
Q 018088 118 EAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLYYD 196 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~ 196 (361)
.+|+||||+| ||+|+...+.++|.++++++|.+.... ......+......+... .......+.+...+.+.+.+
T Consensus 2 ~~k~viFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 76 (207)
T d2hdoa1 2 TYQALMFDIDGTLTNSQPAYTTVMREVLATYGKPFSPA--QAQKTFPMAAEQAMTEL---GIAASEFDHFQAQYEDVMAS 76 (207)
T ss_dssp CCSEEEECSBTTTEECHHHHHHHHHHHHHTTTCCCCHH--HHHHHTTSCHHHHHHHT---TCCGGGHHHHHHHHHHHHTT
T ss_pred CCcEEEEeCCCCcCcCHHHHHHHHHHHHHHcCCCCCHH--HHHHHhcchhhhhhhcc---ccchhhHHHHHHHhhhhhcc
Confidence 4799999999 999999999999999999999876544 33445566666655543 33444455555555555444
Q ss_pred hcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcCCCC
Q 018088 197 NLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDRKP 274 (361)
Q Consensus 197 ~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi~p 274 (361)
.. ....++||+.++|+.|++ +++++|+||+....+...++.+|+..+|+.++++++...+| |++|..+++++|++|
T Consensus 77 ~~-~~~~~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~ 154 (207)
T d2hdoa1 77 HY-DQIELYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAP 154 (207)
T ss_dssp CG-GGCEECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCG
T ss_pred cc-cccccccchhhhhhhhcc-cccccccccccccccccccccccccccccccccccccccchhhhhhhcccccceeeec
Confidence 33 456789999999999985 69999999999999999999999999999999999887666 579999999999999
Q ss_pred CcEEEEcCChHHHHHHHHcCCeEEEE-eCCCCcccccCcceEeCChhhhHHH
Q 018088 275 SKCVVFEDDPRAITAAHNCTMMAVGL-IGAHRAYDLVQADLAVANFNELSVI 325 (361)
Q Consensus 275 ~~~v~IGDs~~Di~aA~~aG~~~v~V-~g~~~~~~l~~ad~vi~sl~EL~~~ 325 (361)
++|+||||+.+|+.+|+++||.+|+| +|..+..+..++++++.++.||..+
T Consensus 155 ~~~l~VgDs~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~i~~l~dll~l 206 (207)
T d2hdoa1 155 QNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQKPLDILEL 206 (207)
T ss_dssp GGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEESSGGGGGGG
T ss_pred cceeEecCCHHHHHHHHHcCCeEEEEecCCCChhHhhhcCcEeCCHHHHHhh
Confidence 99999999999999999999999999 5677777778899999999998653
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.96 E-value=1.1e-28 Score=217.21 Aligned_cols=203 Identities=14% Similarity=0.189 Sum_probs=171.6
Q ss_pred CceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHHHHHHHHH
Q 018088 118 EAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLYYD 196 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~ 196 (361)
.+|+|+||+| ||+|+...+..+|.++++++|++....+. .+.+.+.+....+...+ ...........+...+..
T Consensus 3 ~ik~VifD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 77 (210)
T d2ah5a1 3 SITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVPSPDAKT-IRGFMGPPLESSFATCL----SKDQISEAVQIYRSYYKA 77 (210)
T ss_dssp TCCEEEECSBTTTEECHHHHHHHHHHHHHHHTCCCCCHHH-HHHTSSSCHHHHHHTTS----CGGGHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCccccCHHHHHHHHHHHHHHCCCCCCCHHH-HHHhhhcchhhhccccc----cchhhHHHHHHHHHHHHh
Confidence 3899999999 99999999999999999999987665543 34566666666655533 344555556666666666
Q ss_pred hcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCc
Q 018088 197 NLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSK 276 (361)
Q Consensus 197 ~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~ 276 (361)
.......++||+.++|+.|+.+ ++++++||++...+...++.+|+..+|+.++++++...+||+++..+++++|++|++
T Consensus 78 ~~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~gl~~~fd~v~~~~~~~~~~p~~~~~~~~~~~~~~~~ 156 (210)
T d2ah5a1 78 KGIYEAQLFPQIIDLLEELSSS-YPLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSSPEAPHKADVIHQALQTHQLAPEQ 156 (210)
T ss_dssp TGGGSCEECTTHHHHHHHHHTT-SCEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECSSCCSHHHHHHHHHHHTTCCGGG
T ss_pred hhhhcccchhHHHHHHhhhhcc-cchhhcccccchhhhHHHHhhcccccccccccccccccccccccchhhhhhhccccc
Confidence 6666778899999999999877 599999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCChHHHHHHHHcCCeEEEE-eCCCCcccc--cCcceEeCChhhhHHHH
Q 018088 277 CVVFEDDPRAITAAHNCTMMAVGL-IGAHRAYDL--VQADLAVANFNELSVIN 326 (361)
Q Consensus 277 ~v~IGDs~~Di~aA~~aG~~~v~V-~g~~~~~~l--~~ad~vi~sl~EL~~~l 326 (361)
|++|||+.+|+.+|+++|+.+|+| +|.+...++ .+||++++++.||..++
T Consensus 157 ~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~~l~el~~~l 209 (210)
T d2ah5a1 157 AIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLAYF 209 (210)
T ss_dssp EEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHHHHHT
T ss_pred ceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEECCHHHHHHHh
Confidence 999999999999999999999999 455555554 36999999999998763
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=99.96 E-value=4.8e-28 Score=214.19 Aligned_cols=208 Identities=17% Similarity=0.197 Sum_probs=166.8
Q ss_pred CceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHH-------HccCCChHHHHHHHHH
Q 018088 118 EAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKV-------LLWGKEESELDRLNSR 189 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~-------l~~~~~~~~~~~l~~~ 189 (361)
++|+|+||+| ||+|+...+..++.++++++|.+...... .....+.......... ................
T Consensus 3 ~~k~iiFD~DGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (224)
T d2hsza1 3 QFKLIGFDLDGTLVNSLPDLALSINSALKDVNLPQASENL-VMTWIGNGADVLSQRAVDWACKQAEKELTEDEFKYFKRQ 81 (224)
T ss_dssp SCSEEEECSBTTTEECHHHHHHHHHHHHHHTTCCCCCHHH-HHHHCSSCHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHH
T ss_pred CCCEEEEeCCCCcccCHHHHHHHHHHHHHHCCCCCCcHHH-HHHHhhhhhhhhhhhhhhhhhhhhhhhhhHHHHHHHHHH
Confidence 4899999999 99999999999999999999987765543 3445555544332222 2223344444444444
Q ss_pred HHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHH
Q 018088 190 LTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAA 267 (361)
Q Consensus 190 ~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~ 267 (361)
..............++||+.++|+.|++.|++++++||+....+...++.+|+..+|+.++++++.+..| |++|..++
T Consensus 82 ~~~~~~~~~~~~~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~kp~p~~~~~~~ 161 (224)
T d2hsza1 82 FGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLC 161 (224)
T ss_dssp HHHHHHHHTTSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSSSCTTSSHHHHHHH
T ss_pred HHHHHHHhhccccchHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhccccccccccccccccchhhHHHH
Confidence 4444455555666889999999999999999999999999999999999999999999999999887655 68999999
Q ss_pred HHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEE-eCCCCcccc--cCcceEeCChhhhHHHH
Q 018088 268 VKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGL-IGAHRAYDL--VQADLAVANFNELSVIN 326 (361)
Q Consensus 268 ~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V-~g~~~~~~l--~~ad~vi~sl~EL~~~l 326 (361)
++++++|++|++|||+.+|+.+|+++|+.+|+| +|......+ .+||++++++.||..++
T Consensus 162 ~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~~l~dL~~ii 223 (224)
T d2hsza1 162 GKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKIT 223 (224)
T ss_dssp HHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGGGGGT
T ss_pred HHhhhhhhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEECCHHHHHHhh
Confidence 999999999999999999999999999999999 444444443 36999999999998753
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=99.95 E-value=5.8e-28 Score=219.38 Aligned_cols=208 Identities=16% Similarity=0.266 Sum_probs=164.8
Q ss_pred ceEEEEece-eccccHHH-HHHHHHHHHHHhCCCCCchHHHHHHHhcCCHH-------------HHHHHHHccCCChHHH
Q 018088 119 AYGLIFSWD-VVADTRAL-KLNAWKQLAFEEGKEIPQEGDVLRQILNAGAD-------------HVLHKVLLWGKEESEL 183 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~-~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~-------------~~l~~~l~~~~~~~~~ 183 (361)
+|+||||+| ||+|+... +..++.++++++|++.+.++. ....|.... ..+...+.........
T Consensus 2 IkaviFD~dGTL~d~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (257)
T d1swva_ 2 IEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEA--RKPMGLLKIDHVRALTEMPRIASEWNRVFRQLPTEADI 79 (257)
T ss_dssp CCEEEECSBTTTBSTTCCTTHHHHHHHHHTTTCCCCHHHH--HTTTTSCHHHHHHHHHHSHHHHHHHHHHHSSCCCHHHH
T ss_pred cEEEEEcCCCCeEeCcchHHHHHHHHHHHHcCCCCCHHHH--HHHhCCcHHHHHHHHhhhhhhhHHHHHHhcccCCHHHH
Confidence 789999999 99998654 367889999999987654321 222222221 2233334445566666
Q ss_pred HHHHHHHHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCccc-ceeEecCCCCCCCh--
Q 018088 184 DRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYF-QAIVSEEDGMESMA-- 260 (361)
Q Consensus 184 ~~l~~~~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~F-d~iv~~e~~~~~KP-- 260 (361)
..+...+.+.+...+.....++||+.++|+.|+++|++++|+||.++..+...++.+|+..+| |.+++++++..+||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~d~~~~~d~~~~~KP~p 159 (257)
T d1swva_ 80 QEMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYP 159 (257)
T ss_dssp HHHHHHHHHHHHHHGGGGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSSCCTTSS
T ss_pred HHHHHHHHHHHHHHhhccCccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhcccccccccccccccccccCh
Confidence 777777778787777666789999999999999999999999999999999999999999987 88999998887775
Q ss_pred HHHHHHHHHcCCC-CCcEEEEcCChHHHHHHHHcCCeEEEE-eCCCC----ccc---------------------ccCcc
Q 018088 261 HRFLSAAVKLDRK-PSKCVVFEDDPRAITAAHNCTMMAVGL-IGAHR----AYD---------------------LVQAD 313 (361)
Q Consensus 261 ~~~~~~~~klgi~-p~~~v~IGDs~~Di~aA~~aG~~~v~V-~g~~~----~~~---------------------l~~ad 313 (361)
+.|..+++++|+. +++||||||+.+|+.+|++|||.+|+| +|.+. .++ ..+||
T Consensus 160 ~~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gad 239 (257)
T d1swva_ 160 WMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAH 239 (257)
T ss_dssp HHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHhCCCCcceEEEEeCChhhHHHHHHCCCEEEEEccCCCCCCCCHHHHhhCCHHHHHHHHHHHHHHHHhCCCC
Confidence 6999999999995 589999999999999999999999999 44332 110 12499
Q ss_pred eEeCChhhhHHHHHH
Q 018088 314 LAVANFNELSVINLR 328 (361)
Q Consensus 314 ~vi~sl~EL~~~ll~ 328 (361)
++|+++.||..++.+
T Consensus 240 ~vi~~l~eL~~ii~~ 254 (257)
T d1swva_ 240 FTIETMQELESVMEH 254 (257)
T ss_dssp EEESSGGGHHHHHHH
T ss_pred EEECCHHHHHHHHHH
Confidence 999999999987653
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.95 E-value=4.3e-27 Score=206.28 Aligned_cols=196 Identities=14% Similarity=0.152 Sum_probs=155.8
Q ss_pred eEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccC-CChHHHHHHHHHHHHHHHHh
Q 018088 120 YGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWG-KEESELDRLNSRLTQLYYDN 197 (361)
Q Consensus 120 k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~-~~~~~~~~l~~~~~~~~~~~ 197 (361)
+++|||+| ||+|+...+..+|+++++++|.+.... .....+.+.+....+..+.... ...+.+ ..+...+...
T Consensus 2 ~a~iFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 76 (204)
T d2go7a1 2 TAFIWDLDGTLLDSYEAILSGIEETFAQFSIPYDKE-KVREFIFKYSVQDLLVRVAEDRNLDVEVL----NQVRAQSLAE 76 (204)
T ss_dssp CEEEECTBTTTEECHHHHHHHHHHHHHHHTCCCCHH-HHHHHHHHSCHHHHHHHHHHHHTCCHHHH----HHHHHHHHTT
T ss_pred EEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCCCHH-HHHHhhcccccccccccccchhhhhHHHH----HHHHHHHHHh
Confidence 58999999 999999999999999999999876544 3445556667777766654332 222222 2222333333
Q ss_pred cccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcCCCCC
Q 018088 198 LLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDRKPS 275 (361)
Q Consensus 198 l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi~p~ 275 (361)
......++||+.++|+.|+++|++++|+||... .+...++++|+..||+.++++++...+| |++|..+++++|++|+
T Consensus 77 ~~~~~~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f~~i~~s~~~~~~Kp~~~~~~~~~~~~~~~p~ 155 (204)
T d2go7a1 77 KNAQVVLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSD 155 (204)
T ss_dssp CGGGCEECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGG
T ss_pred hcccCcccchHHhhhhcccccccchhhhcccch-hhhhhhhhcccccccccccccccccccchhHHHHHHHHHHhCCCCc
Confidence 445567899999999999999999999999876 4567899999999999999998876665 6799999999999999
Q ss_pred cEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhhhHHHH
Q 018088 276 KCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNELSVIN 326 (361)
Q Consensus 276 ~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~EL~~~l 326 (361)
+|+||||+.+|+.+|+++|+.+|+|... ...+++.+.++.++..++
T Consensus 156 ~~l~VgD~~~Di~~A~~~G~~~i~v~~~-----~~~~~~~~~~~~dl~~l~ 201 (204)
T d2go7a1 156 NTYYIGDRTLDVEFAQNSGIQSINFLES-----TYEGNHRIQALADISRIF 201 (204)
T ss_dssp GEEEEESSHHHHHHHHHHTCEEEESSCC-----SCTTEEECSSTTHHHHHT
T ss_pred eEEEEeCCHHHHHHHHHcCCeEEEEcCC-----CCCcCeecCCHHHHHHHh
Confidence 9999999999999999999999998322 135778899999988764
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=99.94 E-value=4.7e-26 Score=201.63 Aligned_cols=199 Identities=25% Similarity=0.332 Sum_probs=162.0
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHcc---CCChHHHHHHHHHHHHHH
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLW---GKEESELDRLNSRLTQLY 194 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~---~~~~~~~~~l~~~~~~~~ 194 (361)
+|+||||+| ||+|++..+.+++.++++++|++.... .....+.+.+....+..+... ......+..+.....+.+
T Consensus 2 ikaiiFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (221)
T d1o08a_ 2 FKAVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDR-QFNEQLKGVSREDSLQKILDLADKKVSAEEFKELAKRKNDNY 80 (221)
T ss_dssp CCEEEECCBTTTBTHHHHHHHHHHHHHHHTTCCCCCH-HHHTTTTTCCHHHHHHHHHTTSSSCCCHHHHHHHHHHHHHHH
T ss_pred CcEEEEcCCCCeEcCHHHHHHHHHHHHHHcCCCCChH-HHHHHHhhccchhhhhhccccccccchhhhhhhHHHHHHhhc
Confidence 799999999 999999999999999999999877654 334455566777777666543 445666777777777777
Q ss_pred HHhccc--CCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHc
Q 018088 195 YDNLLS--VTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKL 270 (361)
Q Consensus 195 ~~~l~~--~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~kl 270 (361)
.+.+.. ...++||+.++|+.|++.|++++++||. ......++.+|+.++|+.++++++...+| |++|+.+++++
T Consensus 81 ~~~~~~~~~~~~~~g~~~~l~~l~~~~~~i~i~s~~--~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~l~~~ 158 (221)
T d1o08a_ 81 VKMIQDVSPADVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAV 158 (221)
T ss_dssp HHHTTTCCGGGBCTTHHHHHHHHHHTTCEEEECCSC--TTHHHHHHHTTCGGGCSEECCTTTSSSCTTSTHHHHHHHHHT
T ss_pred cccccccccccccCCceeccccccccccceEEEeec--chhhHHHHhhccccccccccccccccccccChHHHHHHHHHc
Confidence 766543 2368999999999999999999999997 45688999999999999999999988777 56999999999
Q ss_pred CCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhhhH
Q 018088 271 DRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNELS 323 (361)
Q Consensus 271 gi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~EL~ 323 (361)
|++|++||||||+.+|+.+|+++||.+|+|.. ......++.+++++.++.
T Consensus 159 ~i~~~~~l~VgD~~~di~~A~~aG~~~i~v~~---~~~~~~~~~~~~~~~~~~ 208 (221)
T d1o08a_ 159 GVAPSESIGLEDSQAGIQAIKDSGALPIGVGR---PEDLGDDIVIVPDTSHYT 208 (221)
T ss_dssp TCCGGGEEEEESSHHHHHHHHHHTCEEEEESC---HHHHCSSSEEESSGGGCC
T ss_pred CCCCceEEEEecCHHHHHHHHHcCCEEEEECC---hhhcccccEEcCCcccCC
Confidence 99999999999999999999999999999843 223334556666666554
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.94 E-value=4.4e-26 Score=201.98 Aligned_cols=202 Identities=21% Similarity=0.285 Sum_probs=156.6
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHcc---CCChHHHHHHHHHHHHHH
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLW---GKEESELDRLNSRLTQLY 194 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~---~~~~~~~~~l~~~~~~~~ 194 (361)
+|+||||+| ||+|++..+.++|+++++++|++.+.. .....+.|......+..+... .......... ...+
T Consensus 2 ~kaviFD~DGtL~dt~~~~~~a~~~~~~~~g~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 76 (222)
T d2fdra1 2 FDLIIFDCDGVLVDSEIIAAQVESRLLTEAGYPISVE-EMGERFAGMTWKNILLQVESEASIPLSASLLDKS----EKLL 76 (222)
T ss_dssp CSEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCHH-HHHHHHTTCCHHHHHHHHHHHHCCCCCTHHHHHH----HHHH
T ss_pred ceEEEECCCCcccCCHHHHHHHHHHHHHHcCCCCCHH-HHHHHHhhhccccccccccccccccccccchhHH----HHHH
Confidence 689999999 999999999999999999999987644 344556677777766665433 2233333333 3333
Q ss_pred HHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCC---CC--CCChHHHHHHHHH
Q 018088 195 YDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEED---GM--ESMAHRFLSAAVK 269 (361)
Q Consensus 195 ~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~---~~--~~KP~~~~~~~~k 269 (361)
.........++||+.++|+.|+. +.+++|+.....+...++.+|+..+|+.++++.+ .. +++|+.|.+++++
T Consensus 77 ~~~~~~~~~~~~g~~~~L~~l~~---~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~~~~KP~~~~~~~~~~~ 153 (222)
T d2fdra1 77 DMRLERDVKIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQ 153 (222)
T ss_dssp HHHHHHHCCBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHH
T ss_pred HHHhhhccchhhhHHHHhhhccc---cceeeeecchhhhhhhhcccccccccceeecccccccccccccCHHHHHHHHHh
Confidence 33333445889999999998874 5689999999999999999999999997655432 22 4456899999999
Q ss_pred cCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCC-Ccc----cc--cCcceEeCChhhhHHHHHH
Q 018088 270 LDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAH-RAY----DL--VQADLAVANFNELSVINLR 328 (361)
Q Consensus 270 lgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~-~~~----~l--~~ad~vi~sl~EL~~~ll~ 328 (361)
+|++|++||||||+..|+.+|+++||.+|+|.+.. ... .+ .+||++|+++.||..++.+
T Consensus 154 l~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi~~l~eL~~ll~~ 219 (222)
T d2fdra1 154 FGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAVIAA 219 (222)
T ss_dssp HTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHHHHHHH
T ss_pred hCCCCceEEEEcCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999995443 221 11 2599999999999887654
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=99.94 E-value=2.4e-26 Score=204.84 Aligned_cols=209 Identities=20% Similarity=0.265 Sum_probs=154.2
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHHh-CCCCCchHHHHHHHhcCCHHHHHHHHHc-cCCChHHH----HHHHHHHH
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFEE-GKEIPQEGDVLRQILNAGADHVLHKVLL-WGKEESEL----DRLNSRLT 191 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~-G~~~~~~~~~~~~~~g~~~~~~l~~~l~-~~~~~~~~----~~l~~~~~ 191 (361)
.|+||||+| ||++++..+..++.+++.+. |....... ..+.+..........+. ........ ......+.
T Consensus 2 ~klviFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (228)
T d2hcfa1 2 RTLVLFDIDGTLLKVESMNRRVLADALIEVYGTEGSTGS---HDFSGKMDGAIIYEVLSNVGLERAEIADKFDKAKETYI 78 (228)
T ss_dssp CEEEEECCBTTTEEECTHHHHHHHHHHHHHHSCCCCC------CCTTCCHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHH
T ss_pred ceEEEEeCCCCcccCHHHHHHHHHHHHHHHcCCCccHHH---HHHhcCchHHHHHHHHHHhCCChHHHHHHHHHHHHHHH
Confidence 478999999 99999999999998877664 54433221 11223333333333322 22333322 23333333
Q ss_pred HHHHHhc-ccCCCCCccHHHHHHHHhhCC-CcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCCh--HHHHHHH
Q 018088 192 QLYYDNL-LSVTEPMEGLQEWLDAVSSAR-IPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMA--HRFLSAA 267 (361)
Q Consensus 192 ~~~~~~l-~~~~~~~pgv~elL~~L~~~G-i~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP--~~~~~~~ 267 (361)
..+.+.. .....++||+.++|+.|+++| ++++|+||+....+...++.+|+.++||.++++++...+|| +.+...+
T Consensus 79 ~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~k~~p~~~~~~~ 158 (228)
T d2hcfa1 79 ALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDALDRNELPHIALERA 158 (228)
T ss_dssp HHHHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTCSSGGGHHHHHHHHH
T ss_pred HHHHHHhhccCceecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccccccccccccccccccchhHHHHHHh
Confidence 3444433 223467999999999999987 89999999999999999999999999999999998877765 5666655
Q ss_pred HHc---CCCCCcEEEEcCChHHHHHHHHcCCeEEEE-eCCCCccccc--CcceEeCChhhhHHHHHHhh
Q 018088 268 VKL---DRKPSKCVVFEDDPRAITAAHNCTMMAVGL-IGAHRAYDLV--QADLAVANFNELSVINLRRL 330 (361)
Q Consensus 268 ~kl---gi~p~~~v~IGDs~~Di~aA~~aG~~~v~V-~g~~~~~~l~--~ad~vi~sl~EL~~~ll~~l 330 (361)
..+ ++.|++||||||+++|+.+|+++||.+|+| +|.+...++. +||++++++.||..++...+
T Consensus 159 ~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi~~~~el~~~l~~l~ 227 (228)
T d2hcfa1 159 RRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAETDEVLASIL 227 (228)
T ss_dssp HHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESCSCCHHHHHHHHH
T ss_pred hhhcccCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEECCHHHHHHHHHHHh
Confidence 555 899999999999999999999999999999 5666666553 69999999999998876543
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.93 E-value=1.1e-24 Score=195.92 Aligned_cols=208 Identities=15% Similarity=0.157 Sum_probs=147.0
Q ss_pred CCCceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHH---HH----HHhc-------CCHHH--------HHHH
Q 018088 116 PDEAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDV---LR----QILN-------AGADH--------VLHK 172 (361)
Q Consensus 116 ~~~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~---~~----~~~g-------~~~~~--------~l~~ 172 (361)
-+++|+|+||+| ||+|+......++.++++.++......... .. .... ..... .+..
T Consensus 3 m~~IKaviFD~dGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (247)
T d2gfha1 3 LSRVRAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKECFHPYSTCITDVRTSHWEEAIQE 82 (247)
T ss_dssp CCCCCEEEECCBTTTBCHHHHHHHHHHHHHHHHHHTTCCCTHHHHHHHHHHHHHHTCCCC----CHHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEcCCCCcCcChHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHH
Confidence 356999999999 999999888888888777654332211111 00 0000 01111 1111
Q ss_pred HHccCCChHHHHHHHHHHHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEec
Q 018088 173 VLLWGKEESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSE 252 (361)
Q Consensus 173 ~l~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~ 252 (361)
......... +.......+.........++||+.++|+.|++ |++++++||++...+...++..|+..+||.++++
T Consensus 83 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~s 157 (247)
T d2gfha1 83 TKGGADNRK----LAEECYFLWKSTRLQHMILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFDAIVIG 157 (247)
T ss_dssp HHCSSCCHH----HHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEG
T ss_pred hccccchHH----HHHHHHHHHHHhhhccCccCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhccccccccccccc
Confidence 111111111 12222222333333445789999999999985 7999999999999999999999999999999999
Q ss_pred CCCCCCCh--HHHHHHHHHcCCCCCcEEEEcCCh-HHHHHHHHcCCeEEE-EeCCCCc--ccccCcceEeCChhhhHHHH
Q 018088 253 EDGMESMA--HRFLSAAVKLDRKPSKCVVFEDDP-RAITAAHNCTMMAVG-LIGAHRA--YDLVQADLAVANFNELSVIN 326 (361)
Q Consensus 253 e~~~~~KP--~~~~~~~~klgi~p~~~v~IGDs~-~Di~aA~~aG~~~v~-V~g~~~~--~~l~~ad~vi~sl~EL~~~l 326 (361)
++.+..|| ++|..+++++|+.|++|++|||+. +|+.+|+++|+.++. +.+.... .....||++|.++.||..++
T Consensus 158 ~~~~~~KP~p~~~~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i~~l~eL~~ll 237 (247)
T d2gfha1 158 GEQKEEKPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLELPALL 237 (247)
T ss_dssp GGSSSCTTCHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESSGGGHHHHH
T ss_pred cccccchhhhhhHHHHHHHhhcCHHhcceeccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEECCHHHHHHHH
Confidence 99887785 699999999999999999999997 699999999998664 4333322 22346999999999998876
Q ss_pred HH
Q 018088 327 LR 328 (361)
Q Consensus 327 l~ 328 (361)
.+
T Consensus 238 ~~ 239 (247)
T d2gfha1 238 QS 239 (247)
T ss_dssp HH
T ss_pred HH
Confidence 54
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.93 E-value=4.5e-25 Score=196.94 Aligned_cols=208 Identities=13% Similarity=0.107 Sum_probs=143.5
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCC-hHHH-HHHHH-------
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKE-ESEL-DRLNS------- 188 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~-~~~~-~~l~~------- 188 (361)
+|+|+||+| ||+|+..........+.+..+.............. ......+......... .... .....
T Consensus 2 iK~I~FD~dGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (230)
T d1x42a1 2 IRAVFFDFVGTLLSVEGEAKTHLKIMEEVLGDYPLNPKTLLDEYE-KLTREAFSNYAGKPYRPIRDIEEEVMRKLAEKYG 80 (230)
T ss_dssp CCEEEECSBTTTBCHHHHHHHHHHHHHHHHTTCSSCHHHHHHHHH-HHHHHHHHHHTTSBCCCHHHHHHHHHHHHHHHHC
T ss_pred CeEEEEeCCCCcEechhhHHHHHHHHHHHHhhcCCCHHHHHHHHH-HHHHHHHHHhcccccchHHHHHHHHHHHHHHHhh
Confidence 789999999 99998877666666665555432211111111111 1111111111111111 0000 00000
Q ss_pred -----HHHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCCh--H
Q 018088 189 -----RLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMA--H 261 (361)
Q Consensus 189 -----~~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP--~ 261 (361)
.+.+.+.........++||+.++|+.|++ |++++++||++...+...++.+|+.++||.++++++.+..|| +
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~L~~l~~-~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~ 159 (230)
T d1x42a1 81 FKYPENFWEIHLRMHQRYGELYPEVVEVLKSLKG-KYHVGMITDSDTEYLMAHLDALGIKDLFDSITTSEEAGFFKPHPR 159 (230)
T ss_dssp CCCCTTHHHHHHHHHHHHCCBCTTHHHHHHHHBT-TBEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEHHHHTBCTTSHH
T ss_pred hchHHHHHHHHHHHHHhhCcccccHHHHHHHhhc-cCceeeeeccccccchhhhcccccccccccccccccccccchhhH
Confidence 01112222222234789999999999974 799999999999999999999999999999999998877775 7
Q ss_pred HHHHHHHHcCCCCCcEEEEcCCh-HHHHHHHHcCCeEEEEeCCC-CcccccCcceEeCChhhhHHHHHH
Q 018088 262 RFLSAAVKLDRKPSKCVVFEDDP-RAITAAHNCTMMAVGLIGAH-RAYDLVQADLAVANFNELSVINLR 328 (361)
Q Consensus 262 ~~~~~~~klgi~p~~~v~IGDs~-~Di~aA~~aG~~~v~V~g~~-~~~~l~~ad~vi~sl~EL~~~ll~ 328 (361)
+|..+++++|++|++|++|||+. +|+.+|+++|+.+|++.... ......++|+++.|+.||..++.+
T Consensus 160 ~~~~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i~~l~el~~~l~~ 228 (230)
T d1x42a1 160 IFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREVIKIVDE 228 (230)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEESSTTHHHHHHHH
T ss_pred HHHHHHhhhcccccccceeecCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEECCHHHHHHHHHH
Confidence 99999999999999999999985 69999999999999995443 334445799999999999887654
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.91 E-value=6.1e-24 Score=184.07 Aligned_cols=173 Identities=17% Similarity=0.189 Sum_probs=136.2
Q ss_pred CceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHHHHHHHHH
Q 018088 118 EAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLYYD 196 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~ 196 (361)
.+|+||||+| ||+|+...+..+|.++++.+|++.... ......+......+...... . . .....+.+.+..
T Consensus 2 ~~k~viFD~DGTL~dt~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~-~-~----~~~~~~~~~~~~ 73 (187)
T d2fi1a1 2 KYHDYIWDLGGTLLDNYETSTAAFVETLALYGITQDHD--SVYQALKVSTPFAIETFAPN-L-E----NFLEKYKENEAR 73 (187)
T ss_dssp CCSEEEECTBTTTBCHHHHHHHHHHHHHHHTTCCCCHH--HHHHHHHHCHHHHHHHHCTT-C-T----THHHHHHHHHHH
T ss_pred CCCEEEEeCCCCcccCHHHHHHHHHHHHHHcCCCccHH--HHHhhhhccchhhhhhhhHH-H-H----HHHHHHHHHHHH
Confidence 4799999999 999999999999999999999876543 23344455555555554221 1 1 122233333333
Q ss_pred hcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcCCCC
Q 018088 197 NLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDRKP 274 (361)
Q Consensus 197 ~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi~p 274 (361)
.. ....++||+.++|+.|+++|++++|+||...... ..++.+++..+||.+++++++..+| |++|..+++++++
T Consensus 74 ~~-~~~~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~-- 149 (187)
T d2fi1a1 74 EL-EHPILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQI-- 149 (187)
T ss_dssp HT-TSCCBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTC--
T ss_pred Hh-hcCcccchhHHHHHHHHhhhccccccccCccchh-hhhhhhccccccccccccccccccCCCHHHHHHHHHHcCC--
Confidence 33 3457899999999999999999999999877655 5789999999999999999888777 5799999999986
Q ss_pred CcEEEEcCChHHHHHHHHcCCeEEEEeC
Q 018088 275 SKCVVFEDDPRAITAAHNCTMMAVGLIG 302 (361)
Q Consensus 275 ~~~v~IGDs~~Di~aA~~aG~~~v~V~g 302 (361)
++||+|||+..|+.+|+++|+.+++|.+
T Consensus 150 ~~~l~vgDs~~Di~aA~~aG~~~i~v~~ 177 (187)
T d2fi1a1 150 SSGLVIGDRPIDIEAGQAAGLDTHLFTS 177 (187)
T ss_dssp SSEEEEESSHHHHHHHHHTTCEEEECSC
T ss_pred CCeEEEeCCHHHHHHHHHcCCEEEEECC
Confidence 4599999999999999999999999854
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=99.90 E-value=1.7e-23 Score=184.47 Aligned_cols=125 Identities=12% Similarity=0.095 Sum_probs=112.0
Q ss_pred CCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCCh--HHHHHHHHHcCCCCCcEE
Q 018088 201 VTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMA--HRFLSAAVKLDRKPSKCV 278 (361)
Q Consensus 201 ~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP--~~~~~~~~klgi~p~~~v 278 (361)
...++|++.++++.+++.|++++++||+........++..++..+||.++++++.+..|| +.|..+++++|+.|++|+
T Consensus 91 ~~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd~~~~s~~~~~~KP~p~~~~~~~~~~g~~p~e~l 170 (220)
T d1zrna_ 91 RLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAIL 170 (220)
T ss_dssp GCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGEE
T ss_pred cccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccccceeeeeeeeccccHHHHHHHHHHHhCCCCceEE
Confidence 346799999999999999999999999999999999999999999999999999888886 599999999999999999
Q ss_pred EEcCChHHHHHHHHcCCeEEEEeCC-CCccc-ccCcceEeCChhhhHHH
Q 018088 279 VFEDDPRAITAAHNCTMMAVGLIGA-HRAYD-LVQADLAVANFNELSVI 325 (361)
Q Consensus 279 ~IGDs~~Di~aA~~aG~~~v~V~g~-~~~~~-l~~ad~vi~sl~EL~~~ 325 (361)
||||+..|+.+|+++||.+|+|... ....+ ...||++|+++.||..+
T Consensus 171 ~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i~~l~el~~l 219 (220)
T d1zrna_ 171 FVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAVVEL 219 (220)
T ss_dssp EEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESSHHHHHTT
T ss_pred EEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEECCHHHHHhh
Confidence 9999999999999999999999433 23333 24689999999999864
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=3e-23 Score=184.91 Aligned_cols=131 Identities=9% Similarity=0.036 Sum_probs=107.6
Q ss_pred HHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEec-CCCC--CCChHHHHHHHH
Q 018088 192 QLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSE-EDGM--ESMAHRFLSAAV 268 (361)
Q Consensus 192 ~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~-e~~~--~~KP~~~~~~~~ 268 (361)
+...........++||+.++|..|+++|++++|+||+........++..|+.++|+..... ++.. +++|++|..+++
T Consensus 116 ~~~~~~~~~~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~KP~p~~~~~~~~ 195 (253)
T d1zs9a1 116 RAAFTAGRMKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKIGHKVESESYRKIAD 195 (253)
T ss_dssp HHHHHTTSCCBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECGGGCCTTCHHHHHHHHH
T ss_pred HHHHHhhhcccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhhhhcceeeccccccCCCcHHHHHHHH
Confidence 3333344445678999999999999999999999999999999999999999888754443 4343 445679999999
Q ss_pred HcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCC---cccccCcceEeCChhhh
Q 018088 269 KLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHR---AYDLVQADLAVANFNEL 322 (361)
Q Consensus 269 klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~---~~~l~~ad~vi~sl~EL 322 (361)
++|+.|++|+||||+.+|+.+|+++||++|+|...+. ......++.+|+||.||
T Consensus 196 ~~~~~p~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i~sl~EL 252 (253)
T d1zs9a1 196 SIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITSFSEL 252 (253)
T ss_dssp HHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESSGGGC
T ss_pred HhCCCcCcEEEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEECChHHh
Confidence 9999999999999999999999999999999943322 22334689999999997
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=99.87 E-value=1.3e-21 Score=174.87 Aligned_cols=125 Identities=13% Similarity=0.159 Sum_probs=109.2
Q ss_pred CCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCCh--HHHHHHHHHcCCCCCcEE
Q 018088 201 VTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMA--HRFLSAAVKLDRKPSKCV 278 (361)
Q Consensus 201 ~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP--~~~~~~~~klgi~p~~~v 278 (361)
...++|++.+.|+.|+ ++.++++||+....+...++..++..+||.++++++++..|| ++|..+++++|++|++||
T Consensus 91 ~~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~fd~v~~s~~~~~~KP~p~~f~~a~~~lg~~p~e~l 168 (245)
T d1qq5a_ 91 RLTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVL 168 (245)
T ss_dssp SCCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGEE
T ss_pred ccccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhcccccccccccccccccccCccHHHHHHHHHHhCCChhhEE
Confidence 3577999999999986 578999999999999999999999999999999999988885 699999999999999999
Q ss_pred EEcCChHHHHHHHHcCCeEEEEeCCCCc------------------------cc-ccCcceEeCChhhhHHHHH
Q 018088 279 VFEDDPRAITAAHNCTMMAVGLIGAHRA------------------------YD-LVQADLAVANFNELSVINL 327 (361)
Q Consensus 279 ~IGDs~~Di~aA~~aG~~~v~V~g~~~~------------------------~~-l~~ad~vi~sl~EL~~~ll 327 (361)
+|||+.+|+.+|+++||.+|+|...... .. ...||+++.++.||..++.
T Consensus 169 ~VgD~~~di~~A~~aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~~i~~l~el~~lv~ 242 (245)
T d1qq5a_ 169 FVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPALGDLPRLVR 242 (245)
T ss_dssp EEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESSGGGHHHHHH
T ss_pred EEeCCHHHHHHHHHcCCeEEEEcCCCcccccccccccccccchhhhhhhhhhhhccCCCCEEECCHHHHHHHHH
Confidence 9999999999999999999999532210 00 1258999999999998764
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.81 E-value=2.8e-21 Score=170.10 Aligned_cols=102 Identities=12% Similarity=0.063 Sum_probs=90.6
Q ss_pred CCCCCccHHHHHHHHhhCCCcEEEEeCC----CHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcCCCC
Q 018088 201 VTEPMEGLQEWLDAVSSARIPCAVVSGL----DRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDRKP 274 (361)
Q Consensus 201 ~~~~~pgv~elL~~L~~~Gi~vaivSn~----~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi~p 274 (361)
...++||+.++|+.|+++|++++++||+ ........+...|+.+|||.+++++++..+| |++|..+++++|++|
T Consensus 95 ~~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~v~p 174 (222)
T d1cr6a1 95 ARSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGMIKPEPQIYNFLLDTLKAKP 174 (222)
T ss_dssp TCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSEEEEHHHHSCCTTCHHHHHHHHHHHTSCT
T ss_pred cCCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhceeeehhhccCCCCChHHHHHHHHHhCCCc
Confidence 3578999999999999999999999974 3445566677889999999999999877766 579999999999999
Q ss_pred CcEEEEcCChHHHHHHHHcCCeEEEEeC
Q 018088 275 SKCVVFEDDPRAITAAHNCTMMAVGLIG 302 (361)
Q Consensus 275 ~~~v~IGDs~~Di~aA~~aG~~~v~V~g 302 (361)
++||||||+..|+.+|+++||.+|+|..
T Consensus 175 ~~~l~IgD~~~Di~~A~~aG~~ti~V~~ 202 (222)
T d1cr6a1 175 NEVVFLDDFGSNLKPARDMGMVTILVHN 202 (222)
T ss_dssp TSEEEEESSSTTTHHHHHHTCEEEECCS
T ss_pred ceEEEEECCHHHHHHHHHcCCEEEEECC
Confidence 9999999999999999999999999843
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.81 E-value=2.4e-20 Score=163.05 Aligned_cols=100 Identities=11% Similarity=-0.001 Sum_probs=87.7
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCHHH----HHHHHHhCCCCcccceeEecCCCCCCCh--HHHHHHHHHcCCCCC
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDRRK----MVEALERMGLLKYFQAIVSEEDGMESMA--HRFLSAAVKLDRKPS 275 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~----~~~~L~~lgl~~~Fd~iv~~e~~~~~KP--~~~~~~~~klgi~p~ 275 (361)
..++||+.++|..|+++|++++++||+.... ........++.++||.+++++++..+|| ++|..+++++|++|+
T Consensus 98 ~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~ 177 (225)
T d1zd3a1 98 RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASPS 177 (225)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGG
T ss_pred CCCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhccEEEeccccccchhHHHHHHHHhhhcccCcc
Confidence 4679999999999999999999999875443 3344455678899999999998777775 799999999999999
Q ss_pred cEEEEcCChHHHHHHHHcCCeEEEEe
Q 018088 276 KCVVFEDDPRAITAAHNCTMMAVGLI 301 (361)
Q Consensus 276 ~~v~IGDs~~Di~aA~~aG~~~v~V~ 301 (361)
+||||||+..|+.+|+++||.+|+|.
T Consensus 178 e~l~VgD~~~Di~~A~~~G~~ti~v~ 203 (225)
T d1zd3a1 178 EVVFLDDIGANLKPARDLGMVTILVQ 203 (225)
T ss_dssp GEEEEESCHHHHHHHHHTTCEEEECS
T ss_pred ceeEEecCHHHHHHHHHcCCEEEEEC
Confidence 99999999999999999999999974
|
| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: Protein UTR4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.81 E-value=2.5e-19 Score=157.15 Aligned_cols=199 Identities=12% Similarity=0.099 Sum_probs=127.6
Q ss_pred CceEEEEece-eccccHH-------HHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHH---HccCCChHHHHHH
Q 018088 118 EAYGLIFSWD-VVADTRA-------LKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKV---LLWGKEESELDRL 186 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~-------~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~---l~~~~~~~~~~~l 186 (361)
.+++|+||+| ||+|+.. .+.+.+.+++.+.+.... .................... ............+
T Consensus 2 ~~~~~lfD~dGTl~d~~~v~d~lfp~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (225)
T d2g80a1 2 NYSTYLLDIEGTVCPISFVKETLFPYFTNKVPQLVQQDTRDSP-VSNILSQFHIDNKEQLQAHILELVAKDVKDPILKQL 80 (225)
T ss_dssp CCSEEEECCBTTTBCTHHHHHTHHHHHHHHHHHHHHSCCTTSH-HHHHHHTTCCCCHHHHHHHHHHHHHTTCCCHHHHHH
T ss_pred CCCEEEEcCCCCCcccHhhhhhhhHHHHHHHHHHHHHhcCChH-HHHHHHHhhhhhHHHHHHHHHHHhhhhhhhHHHHHH
Confidence 4789999999 9999852 122344444444443321 22222333333333333222 2222333333333
Q ss_pred HHHHHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHH-----------HHhCCCCcccceeEecCCC
Q 018088 187 NSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEA-----------LERMGLLKYFQAIVSEEDG 255 (361)
Q Consensus 187 ~~~~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~-----------L~~lgl~~~Fd~iv~~e~~ 255 (361)
.................+.+++.+++..+ ..+++.++......... ++.+|+.++|+.+++++..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~Fd~v~~~~~~ 156 (225)
T d2g80a1 81 QGYVWAHGYESGQIKAPVYADAIDFIKRK----KRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTS 156 (225)
T ss_dssp HHHHHHHHHHTTSCCBCCCHHHHHHHHHC----SCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHHHH
T ss_pred HHHHHHHHHHhhcccccchhhHHHHHhhH----HhhhhhhhccchhhhhhhhhhhhhHHHHHHhcCCccccceeeecccc
Confidence 33333333333334446788888877644 56788888766554444 3456889999999988654
Q ss_pred CCCC--hHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCC-cccccCcceEeCChhhh
Q 018088 256 MESM--AHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHR-AYDLVQADLAVANFNEL 322 (361)
Q Consensus 256 ~~~K--P~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~-~~~l~~ad~vi~sl~EL 322 (361)
. .| |++|..+++++|+.|++|+||||+.+|+.+|+++||.+|+|...+. ......+..+|.+|+||
T Consensus 157 ~-~KP~p~~f~~~~~~lg~~p~e~l~VgD~~~Dv~~A~~aG~~ti~v~r~g~~~~~~~~~~~~i~~~~eL 225 (225)
T d2g80a1 157 G-KKTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQVYKNFETL 225 (225)
T ss_dssp C-CTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEECCTTSCCCCSSCCSCEESCSTTC
T ss_pred C-CCCChhHhHHHHHhcccCchhceeecCCHHHHHHHHHcCCEEEEEeCCCCCCCcccCCCCccCChhhC
Confidence 3 46 5799999999999999999999999999999999999999954333 23334577789999986
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.79 E-value=1.1e-19 Score=161.25 Aligned_cols=187 Identities=16% Similarity=0.095 Sum_probs=118.8
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcC-CHHHHHHHHHc-cCCChHHHHHHHHHHHHHHH
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNA-GADHVLHKVLL-WGKEESELDRLNSRLTQLYY 195 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~-~~~~~l~~~l~-~~~~~~~~~~l~~~~~~~~~ 195 (361)
.++|+|||| ||++.+ +|.+++...|..........+.+.|. ...+.+..... ...... +.+.
T Consensus 10 ~~aV~FD~DGTLi~~e-----~~~~l~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~----------~~~~ 74 (217)
T d1nnla_ 10 ADAVCFDVDSTVIREE-----GIDELAKICGVEDAVSEMTRRAMGGAVPFKAALTERLALIQPSRE----------QVQR 74 (217)
T ss_dssp CSEEEEETBTTTBSSC-----HHHHHHHHTTCTTTC------------CHHHHHHHHHHHHCCCHH----------HHHH
T ss_pred CCEEEEcCccccCCcc-----HHHHHHHHcCChHHHHHHHHHHHcCCCCHHHHHHHHHHhcccchH----------HHHH
Confidence 579999999 999987 78888888887654443333333332 22233222111 111111 1111
Q ss_pred HhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcc--cc--------eeEecCCCC------CCC
Q 018088 196 DNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKY--FQ--------AIVSEEDGM------ESM 259 (361)
Q Consensus 196 ~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~--Fd--------~iv~~e~~~------~~K 259 (361)
........++||+.++++.|+++|++++|+|++....+..+++.+|+..+ |. ..+++.... ..|
T Consensus 75 ~~~~~~~~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g~~~~~p~~~~~~K 154 (217)
T d1nnla_ 75 LIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGK 154 (217)
T ss_dssp HHHHSCCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHH
T ss_pred HHHhhccccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeeeeeeehhccccceeeeeeeccchH
Confidence 11113456899999999999999999999999999999999999999743 11 112221111 124
Q ss_pred hHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCC-cccccCcceEeCChhhhH
Q 018088 260 AHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHR-AYDLVQADLAVANFNELS 323 (361)
Q Consensus 260 P~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~-~~~l~~ad~vi~sl~EL~ 323 (361)
.+.+..+.+++ ++++|++||||.+|+.|++.||+.+ ++.+... .....++|+++.+|.||.
T Consensus 155 ~~~v~~~~~~~--~~~~~~~vGDs~~Di~~~~~ag~~v-a~~~~~~~~~~~~~ad~~i~~f~ell 216 (217)
T d1nnla_ 155 GKVIKLLKEKF--HFKKIIMIGDGATDMEACPPADAFI-GFGGNVIRQQVKDNAKWYITDFVELL 216 (217)
T ss_dssp HHHHHHHHHHH--CCSCEEEEESSHHHHTTTTTSSEEE-EECSSCCCHHHHHHCSEEESCGGGGC
T ss_pred HHHHHHHHhcc--CccccEEEEeCHhhHHHHHhCCceE-EECCCHHHHHHHHhCCCEeCCHHHhc
Confidence 45666665554 5789999999999999999999874 4432211 122246999999999974
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=99.77 E-value=2.2e-19 Score=158.85 Aligned_cols=196 Identities=12% Similarity=0.008 Sum_probs=127.8
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcC-CHHHHHHHHHccCCChHHHHHHHHHHHHHHHH
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNA-GADHVLHKVLLWGKEESELDRLNSRLTQLYYD 196 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~-~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~ 196 (361)
..+|+|||| ||++++ ++..+++.++.+. ..........+. .....+........ .. ..+.+..
T Consensus 4 k~lVifD~DGTL~~~d-----~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~--------~~~~~~~ 68 (226)
T d2feaa1 4 KPFIICDFDGTITMND-----NIINIMKTFAPPE-WMALKDGVLSKTLSIKEGVGRMFGLLP-SS--------LKEEITS 68 (226)
T ss_dssp CEEEEECCTTTTBSSC-----HHHHHHHHHSCTH-HHHHHHHHHTTSSCHHHHHHHHHTTSB-GG--------GHHHHHH
T ss_pred CeEEEEeCCCCCcCch-----HHHHHHHHHCcch-HHHHHHHHHcCcccHHHHHHHHHHHhc-cc--------cHHHHHH
Confidence 468999999 999886 5566677776432 111112222222 23333333222111 11 1111122
Q ss_pred hcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccce---eEecC------------CCCCCChH
Q 018088 197 NLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQA---IVSEE------------DGMESMAH 261 (361)
Q Consensus 197 ~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~---iv~~e------------~~~~~KP~ 261 (361)
......+++||+.++|+.|+++|++++++|++.+..++..++++|+.++|.. .+..+ .....||+
T Consensus 69 ~~~~~~~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~~~~~~~~~~~~~~~~k~~ 148 (226)
T d2feaa1 69 FVLEDAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGC 148 (226)
T ss_dssp HHHHHCCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBCEEECTTCCCTTCCSCCSS
T ss_pred HHHhccchhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCcceeccccccccccccCCHH
Confidence 2223347899999999999999999999999999999999999998777632 11111 11234688
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhhhHHHHHHh
Q 018088 262 RFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNELSVINLRR 329 (361)
Q Consensus 262 ~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~EL~~~ll~~ 329 (361)
....+++++++.+++|+||||+.+|+.||++||+..+.-...........+...++++.++...+.+.
T Consensus 149 ~~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~ 216 (226)
T d2feaa1 149 CKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLPYQDFYEIRKEIENV 216 (226)
T ss_dssp CHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEECCSSHHHHHHHHHTS
T ss_pred HHHHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEEEecchHHHHHHcCCCeeecCCHHHHHHHHHHH
Confidence 89999999999999999999999999999999975432111111122234567789999998876543
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.77 E-value=2.8e-20 Score=157.91 Aligned_cols=99 Identities=21% Similarity=0.180 Sum_probs=88.3
Q ss_pred CCCCCccHHHHHHHHhhCCCcEEEEeCCCH-HHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEE
Q 018088 201 VTEPMEGLQEWLDAVSSARIPCAVVSGLDR-RKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVV 279 (361)
Q Consensus 201 ~~~~~pgv~elL~~L~~~Gi~vaivSn~~~-~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~ 279 (361)
...++||+.++|+.|+++|++++|+||+.. ......++.+++..+|+.+... ..+||+.|..+++++|++|++|+|
T Consensus 44 ~~~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~~~~~~---~kp~~~~~~~~~~~~~~~~~~~l~ 120 (164)
T d1u7pa_ 44 NIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFIQREIY---PGSKVTHFERLHHKTGVPFSQMVF 120 (164)
T ss_dssp EECCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCSEEEES---SSCHHHHHHHHHHHHCCCGGGEEE
T ss_pred ccccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccceeeecc---cCCChHHHHHHHHHhCCChHHEEE
Confidence 347899999999999999999999998765 5567788999999999887665 347789999999999999999999
Q ss_pred EcCChHHHHHHHHcCCeEEEEeC
Q 018088 280 FEDDPRAITAAHNCTMMAVGLIG 302 (361)
Q Consensus 280 IGDs~~Di~aA~~aG~~~v~V~g 302 (361)
|||+..|+.+|+++|+.+|+|..
T Consensus 121 igD~~~di~aA~~aG~~~i~v~~ 143 (164)
T d1u7pa_ 121 FDDENRNIIDVGRLGVTCIHIRD 143 (164)
T ss_dssp EESCHHHHHHHHTTTCEEEECSS
T ss_pred EcCCHHHHHHHHHcCCEEEEECC
Confidence 99999999999999999999843
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=99.75 E-value=7.5e-19 Score=149.80 Aligned_cols=103 Identities=14% Similarity=0.073 Sum_probs=93.0
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhC-CCCcccceeEecCCCCCCC--hHHHHHHHHHcCCCCCcEE
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERM-GLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDRKPSKCV 278 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~l-gl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi~p~~~v 278 (361)
..+.+|+.+++..++..|++++++||+........+..+ ++.++|+.++++++.+.+| |++|..+++++|++|++|+
T Consensus 83 ~~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~Kp~~~~~~~~~~~~~~~~~~~l 162 (197)
T d2b0ca1 83 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTV 162 (197)
T ss_dssp EEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred cccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccchhhccceeecccccccccchHHHHHHHHhcCCCCCeEE
Confidence 367999999999999999999999999888877777776 8999999999998877666 5799999999999999999
Q ss_pred EEcCChHHHHHHHHcCCeEEEEeCCC
Q 018088 279 VFEDDPRAITAAHNCTMMAVGLIGAH 304 (361)
Q Consensus 279 ~IGDs~~Di~aA~~aG~~~v~V~g~~ 304 (361)
||||+.+|+.+|+++|+.+|+|.+..
T Consensus 163 ~vgDs~~di~~A~~aG~~ti~v~~~~ 188 (197)
T d2b0ca1 163 FFDDNADNIEGANQLGITSILVKDKT 188 (197)
T ss_dssp EEESCHHHHHHHHTTTCEEEECCSTT
T ss_pred EEeCCHHHHHHHHHcCCEEEEECCCC
Confidence 99999999999999999999986543
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.73 E-value=4.5e-18 Score=147.17 Aligned_cols=189 Identities=16% Similarity=0.146 Sum_probs=128.1
Q ss_pred CceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcC-CHHHHHHHHHccCCChHHHHHHHHHHHHHHH
Q 018088 118 EAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNA-GADHVLHKVLLWGKEESELDRLNSRLTQLYY 195 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~-~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~ 195 (361)
+.|+|+||+| ||++++ +|..++++.|+............... ................. ....
T Consensus 3 kkKlv~FDlDGTL~d~e-----s~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~ 67 (210)
T d1j97a_ 3 KKKLILFDFDSTLVNNE-----TIDEIAREAGVEEEVKKITKEAMEGKLNFEQSLRKRVSLLKDLP----------IEKV 67 (210)
T ss_dssp CCCEEEECCCCCCBSSC-----HHHHHHHHTTCHHHHHHHHHHHHTTSSCHHHHHHHHHHTTTTCB----------HHHH
T ss_pred CCeEEEEeCCCCcCCch-----HHHHHHHHcCCcHHHHHHHHHHhcccchhHHHHHHHHHHHhhhH----------HHHH
Confidence 3689999999 999997 77888888885432211111111111 11111111111110000 0011
Q ss_pred HhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCC------------CCChHHH
Q 018088 196 DNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGM------------ESMAHRF 263 (361)
Q Consensus 196 ~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~------------~~KP~~~ 263 (361)
........+.+|+.++++.++.+|..++++|+.....+....+..+...++...+..++.. ..|+..+
T Consensus 68 ~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (210)
T d1j97a_ 68 EKAIKRITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEIL 147 (210)
T ss_dssp HHHHHTCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHH
T ss_pred HHHhhhhhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhhhccccccccccccccccccccccchh
Confidence 1112344789999999999999999999999999999999999998888776655544321 1246789
Q ss_pred HHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCC--hhhhHH
Q 018088 264 LSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVAN--FNELSV 324 (361)
Q Consensus 264 ~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~s--l~EL~~ 324 (361)
..+++++++.|++|++||||.||+.|++.||+++++ + ........||+++++ ++++..
T Consensus 148 ~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~--n-a~~~lk~~Ad~vi~~~d~~~vl~ 207 (210)
T d1j97a_ 148 EKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF--C-AKPILKEKADICIEKRDLREILK 207 (210)
T ss_dssp HHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE--S-CCHHHHTTCSEEECSSCGGGGGG
T ss_pred hhHHHHhcccccceEEecCCcChHHHHHHCCCCEEE--C-CCHHHHHhCCEEEcCCCHHHHHH
Confidence 999999999999999999999999999999987544 2 233334579999984 556654
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=99.68 E-value=2.2e-16 Score=135.83 Aligned_cols=125 Identities=14% Similarity=0.021 Sum_probs=92.7
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCH---------------HHHHHHHHhCCCCcccceeEecC-----------CC
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDR---------------RKMVEALERMGLLKYFQAIVSEE-----------DG 255 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~---------------~~~~~~L~~lgl~~~Fd~iv~~e-----------~~ 255 (361)
.+++||+.++|+.|+++|++++++||.+. ..+...+...|+. ..+..+|.. +.
T Consensus 26 ~~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~cp~~p~~~~~~~~~~~ 104 (182)
T d2gmwa1 26 FEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD-LDGIYYCPHHPQGSVEEFRQVC 104 (182)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC-CSEEEEECCBTTCSSGGGBSCC
T ss_pred eeECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhccc-ccceeecccccccccccccccc
Confidence 36899999999999999999999999753 1233334444442 223334331 22
Q ss_pred CCCC--hHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeE-EEEeCCCCcc-cc-cCcceEeCChhhhHHHHH
Q 018088 256 MESM--AHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMA-VGLIGAHRAY-DL-VQADLAVANFNELSVINL 327 (361)
Q Consensus 256 ~~~K--P~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~-v~V~g~~~~~-~l-~~ad~vi~sl~EL~~~ll 327 (361)
..+| |.+++.++++++++|++++||||+.+|+++|++||+.+ ++|.+.+... .. ..||+++.++.|+..++.
T Consensus 105 ~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~~l~dl~~~ik 181 (182)
T d2gmwa1 105 DCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQAIK 181 (182)
T ss_dssp SSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHHHH
T ss_pred cccCCccccccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEECCHHHHHHHhc
Confidence 2345 57999999999999999999999999999999999965 5664443332 22 359999999999998764
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=99.67 E-value=1.8e-16 Score=139.60 Aligned_cols=122 Identities=15% Similarity=0.160 Sum_probs=85.9
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCC---------------HHHHHHHHHhCCCCcccceeEecC------------CC
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLD---------------RRKMVEALERMGLLKYFQAIVSEE------------DG 255 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~---------------~~~~~~~L~~lgl~~~Fd~iv~~e------------~~ 255 (361)
.++||+.++|+.|+++|++++|+||.+ ...+...++..|+ +++.++... +.
T Consensus 48 ~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~--~~~~~~~~~~~~~~~~~~~~~~~ 125 (209)
T d2o2xa1 48 VLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGV--FVDMVLACAYHEAGVGPLAIPDH 125 (209)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTC--CCSEEEEECCCTTCCSTTCCSSC
T ss_pred EecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhhccc--ccceEEEeccccccccccccccc
Confidence 689999999999999999999999843 1223444555554 334433331 12
Q ss_pred CCCC--hHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhhhHHHH
Q 018088 256 MESM--AHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNELSVIN 326 (361)
Q Consensus 256 ~~~K--P~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~EL~~~l 326 (361)
..+| |.++..+++++|++|++|+||||+.+|+++|++|||.+++|...........+...+.++.++..++
T Consensus 126 ~~rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~~g~~~~~~~~~~~~~~~~~e~~dll 198 (209)
T d2o2xa1 126 PMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLRDSSELGDLL 198 (209)
T ss_dssp TTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEETTEEEEEESSHHHHHHHH
T ss_pred ccccccchhhhHhHHHhCCCccceEEeCCCHHHHHHHHHCCCcEEEEeCCCCcccCCccccCccchhHHHHHH
Confidence 2235 5699999999999999999999999999999999999998844332222122333455566665544
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=99.64 E-value=6e-16 Score=139.36 Aligned_cols=66 Identities=15% Similarity=0.195 Sum_probs=57.1
Q ss_pred CChHHHHHHHHHcCCCCCcEEEEcCChH-HHHHHHHcCCeEEEE-eCCCCccccc----CcceEeCChhhhH
Q 018088 258 SMAHRFLSAAVKLDRKPSKCVVFEDDPR-AITAAHNCTMMAVGL-IGAHRAYDLV----QADLAVANFNELS 323 (361)
Q Consensus 258 ~KP~~~~~~~~klgi~p~~~v~IGDs~~-Di~aA~~aG~~~v~V-~g~~~~~~l~----~ad~vi~sl~EL~ 323 (361)
+.|++|..+++++|++|++|+||||++. |+.+|++|||.+|+| +|.+...++. +||++++++.||.
T Consensus 177 P~p~~~~~a~~~lgi~p~e~v~IGD~~~~DI~~a~~aG~~tilV~~G~~~~~~l~~~~~~pd~i~~sl~eL~ 248 (250)
T d2c4na1 177 PSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPSVAEID 248 (250)
T ss_dssp TSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESSGGGCC
T ss_pred chhhhHhhhhhhhcCCchheEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhCCCCCCEEECCHHHhC
Confidence 3467999999999999999999999975 999999999999999 5666655543 4799999999975
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.59 E-value=1.4e-15 Score=145.57 Aligned_cols=128 Identities=20% Similarity=0.294 Sum_probs=103.8
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccce--eEecCC-----------CCCCC--hHHHHHHH
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQA--IVSEED-----------GMESM--AHRFLSAA 267 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~--iv~~e~-----------~~~~K--P~~~~~~~ 267 (361)
+|.||+.++|+.|+++|++++++||.+...+...++.+|+.++|+. ++++++ ....| |+.+..++
T Consensus 215 ~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~~ 294 (380)
T d1qyia_ 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAAL 294 (380)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHHH
T ss_pred cchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCCcceEEecchhhhhhhhccccccccCCChHHHHHHH
Confidence 4677999999999999999999999999999999999999999964 555543 23345 56777776
Q ss_pred HH--------------cCCCCCcEEEEcCChHHHHHHHHcCCeEEEE-eCCCCcc---cc--cCcceEeCChhhhHHHHH
Q 018088 268 VK--------------LDRKPSKCVVFEDDPRAITAAHNCTMMAVGL-IGAHRAY---DL--VQADLAVANFNELSVINL 327 (361)
Q Consensus 268 ~k--------------lgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V-~g~~~~~---~l--~~ad~vi~sl~EL~~~ll 327 (361)
.. +++.|++|+||||+.||+.||++||+.+|+| +|..... ++ .+||++++++.||..++.
T Consensus 295 ~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii~~~~el~~il~ 374 (380)
T d1qyia_ 295 YGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGELRGVLD 374 (380)
T ss_dssp HCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESSGGGHHHHHS
T ss_pred HHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHHhCCCCEEECCHHHHHHHHH
Confidence 44 4677899999999999999999999999999 4443322 22 369999999999998865
Q ss_pred Hhh
Q 018088 328 RRL 330 (361)
Q Consensus 328 ~~l 330 (361)
+.+
T Consensus 375 ~l~ 377 (380)
T d1qyia_ 375 NLL 377 (380)
T ss_dssp CTT
T ss_pred HHH
Confidence 543
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=99.59 E-value=4.2e-15 Score=134.21 Aligned_cols=69 Identities=14% Similarity=0.181 Sum_probs=58.6
Q ss_pred CChHHHHHHHHHcCCCCCcEEEEcCCh-HHHHHHHHcCCeEEEE-eCCCCcccc----cCcceEeCChhhhHHHH
Q 018088 258 SMAHRFLSAAVKLDRKPSKCVVFEDDP-RAITAAHNCTMMAVGL-IGAHRAYDL----VQADLAVANFNELSVIN 326 (361)
Q Consensus 258 ~KP~~~~~~~~klgi~p~~~v~IGDs~-~Di~aA~~aG~~~v~V-~g~~~~~~l----~~ad~vi~sl~EL~~~l 326 (361)
+.|.+|..+++++|++|++|+||||++ +||.+|+++||.+|+| +|.....+. ..||++++++.||..++
T Consensus 186 P~p~~~~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii~~l~eL~~~l 260 (261)
T d1vjra_ 186 PNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAKAV 260 (261)
T ss_dssp TSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHHH
T ss_pred CcHHHHHHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHHh
Confidence 345799999999999999999999996 5999999999999999 555554433 25899999999998875
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=99.50 E-value=5.2e-15 Score=124.77 Aligned_cols=102 Identities=11% Similarity=0.044 Sum_probs=76.7
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCC---------------HHHHHHHHHhCCCCc---ccceeEecCCCCCCC--hH
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLD---------------RRKMVEALERMGLLK---YFQAIVSEEDGMESM--AH 261 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~---------------~~~~~~~L~~lgl~~---~Fd~iv~~e~~~~~K--P~ 261 (361)
..++||+.++|+.|+++|++++++||.+ ...+...+...|+.. +|+..++.++...+| |+
T Consensus 29 ~~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~~~~~~~KP~p~ 108 (161)
T d2fpwa1 29 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADECDCRKPKVK 108 (161)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHTTCCEEEEEEECCCGGGCCSSSTTSSG
T ss_pred ceECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhccccccccceeeeccccccccccccccccH
Confidence 4789999999999999999999999964 223455666666632 233333444555556 46
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCC
Q 018088 262 RFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGA 303 (361)
Q Consensus 262 ~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~ 303 (361)
+++.+++++|++|++|+||||+..|+++|++|||.+++|...
T Consensus 109 ~~~~~~~~~~id~~~~~~IGD~~~Di~aA~~aG~~~i~i~~~ 150 (161)
T d2fpwa1 109 LVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRE 150 (161)
T ss_dssp GGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTT
T ss_pred HHHHHHHhcCCChhcEEEECCCHHHHHHHHHcCCeEEEECCC
Confidence 999999999999999999999999999999999999998443
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=99.50 E-value=3.7e-15 Score=134.31 Aligned_cols=66 Identities=18% Similarity=0.233 Sum_probs=56.0
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEcCChH-HHHHHHHcCCeEEEE-eCCCCcccc----cCcceEeCChhhh
Q 018088 257 ESMAHRFLSAAVKLDRKPSKCVVFEDDPR-AITAAHNCTMMAVGL-IGAHRAYDL----VQADLAVANFNEL 322 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p~~~v~IGDs~~-Di~aA~~aG~~~v~V-~g~~~~~~l----~~ad~vi~sl~EL 322 (361)
++.|++|..+++++|++|++|+||||+.. ||.+|++|||.+|+| +|.+...+. ..||++++|+.|+
T Consensus 180 KP~p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~~~~PD~vi~sl~e~ 251 (253)
T d1wvia_ 180 KPEAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDFVLSSLAEW 251 (253)
T ss_dssp TTSHHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEESSSSSCTTTGGGCSSCCSEEESCGGGC
T ss_pred cCCcccceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEECCCCCCHHHHhhcCCCCCEEECCHHHc
Confidence 33467999999999999999999999976 999999999999999 555555443 2479999999986
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.49 E-value=1.1e-13 Score=124.41 Aligned_cols=67 Identities=12% Similarity=0.129 Sum_probs=55.7
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEcCChH-HHHHHHHcCCeEEEE-eCCCCcccc----cCcceEeCChhhhH
Q 018088 257 ESMAHRFLSAAVKLDRKPSKCVVFEDDPR-AITAAHNCTMMAVGL-IGAHRAYDL----VQADLAVANFNELS 323 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p~~~v~IGDs~~-Di~aA~~aG~~~v~V-~g~~~~~~l----~~ad~vi~sl~EL~ 323 (361)
+++|++|.++++++|++|++|+||||+.+ |+.||++|||.+|+| +|.+..+.. .+||++++|+.|+.
T Consensus 180 KP~~~~~~~~~~~~gi~~~~~l~IGD~~~~DI~~a~~aG~~si~V~~G~~~~~~~~~~~~~Pd~vi~sl~e~~ 252 (253)
T d1yv9a1 180 KPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDSLDEWT 252 (253)
T ss_dssp TTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESSGGGCC
T ss_pred ccchhHHHHHHHHhCCCccceEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhcCCCCCEEECCHHHcC
Confidence 44567899999999999999999999975 999999999999999 454443332 25899999999863
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.48 E-value=5.7e-14 Score=120.55 Aligned_cols=182 Identities=12% Similarity=0.111 Sum_probs=123.1
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcC---CHHHHHHHHH----ccCCChHHHHHHHHHH
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNA---GADHVLHKVL----LWGKEESELDRLNSRL 190 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~---~~~~~l~~~l----~~~~~~~~~~~l~~~~ 190 (361)
+|+|+|||| ||++. .|.+++++.|+.... ..|. .....+..-+ ......
T Consensus 2 mkli~fDlDGTLl~e------~~~~~a~~~Gi~~~~-------~tgR~~~~~~~~~~~~v~ll~~~~~~~---------- 58 (206)
T d1rkua_ 2 MEIACLDLEGVLVPE------IWIAFAEKTGIDALK-------ATTRDIPDYDVLMKQRLRILDEHGLKL---------- 58 (206)
T ss_dssp CEEEEEESBTTTBCC------HHHHHHHHHTCGGGG-------CCTTTCCCHHHHHHHHHHHHHHTTCCH----------
T ss_pred cEEEEEcCccchHHH------HHHHHHHHcCCHHHH-------HHCCCCCCHHHHHHHHHHHHHhCCCce----------
Confidence 589999999 99984 588888888875311 1121 1222222111 001111
Q ss_pred HHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCC------CCChHHHH
Q 018088 191 TQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGM------ESMAHRFL 264 (361)
Q Consensus 191 ~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~------~~KP~~~~ 264 (361)
..+.. ........++....+..++ .+++++++|+++..........++...++.......... ..++....
T Consensus 59 -~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 135 (206)
T d1rkua_ 59 -GDIQE-VIATLKPLEGAVEFVDWLR-ERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKR 135 (206)
T ss_dssp -HHHHH-HHTTCCCCTTHHHHHHHHH-TTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSCEEEEECCSSSHHH
T ss_pred -ehhhh-hhhhccccchHHHHHHHhh-cCceEEEeccCchHHHHHHHHHhCCchhhcceeeeecccccccccccchhhHH
Confidence 11111 1234467889988887765 679999999999999999999998877665444332221 23566778
Q ss_pred HHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceE-eCChhhhHHHHHH
Q 018088 265 SAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLA-VANFNELSVINLR 328 (361)
Q Consensus 265 ~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~v-i~sl~EL~~~ll~ 328 (361)
..++++++.+++|++|||+.||+.|.+.||.++++ ++........++++ ..+.+|+...+++
T Consensus 136 ~~~~~~~i~~~eviaiGDg~NDi~Ml~~Ag~gIAm--na~~~v~~~~~~~~~~~~~~d~~~~~~~ 198 (206)
T d1rkua_ 136 QSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILF--HAPENVIREFPQFPAVHTYEDLKREFLK 198 (206)
T ss_dssp HHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEE--SCCHHHHHHCTTSCEECSHHHHHHHHHH
T ss_pred HHHHHhcccccceEEecCCccCHHHHHhCCccEEE--CCCHHHHHhCCCceeecCHHHHHHHHHH
Confidence 88999999999999999999999999999998776 33322222456775 6789998876654
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=99.40 E-value=3.3e-13 Score=111.08 Aligned_cols=99 Identities=9% Similarity=-0.094 Sum_probs=70.1
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCH---HHHHHHHHhCC------CCcccceeEecCCCCCCCh-HHHHHHHHHcC
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDR---RKMVEALERMG------LLKYFQAIVSEEDGMESMA-HRFLSAAVKLD 271 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~---~~~~~~L~~lg------l~~~Fd~iv~~e~~~~~KP-~~~~~~~~klg 271 (361)
..++||+.++|+.|+++|++++++||.+. ......|+..+ ....++...........++ .....++.++.
T Consensus 35 ~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~k~~~l~~~~ 114 (149)
T d1ltqa1 35 DVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPLVMQCQREQGDTRKDDVVKEEIFWKHI 114 (149)
T ss_dssp CCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCCSEEEECCTTCCSCHHHHHHHHHHHHT
T ss_pred CccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHHhhhhhhcCCCcEEEeecccccccCCchHHHHHHHHHhc
Confidence 47899999999999999999999999652 22223333211 1124455555555444443 45566677776
Q ss_pred CCCCc-EEEEcCChHHHHHHHHcCCeEEEE
Q 018088 272 RKPSK-CVVFEDDPRAITAAHNCTMMAVGL 300 (361)
Q Consensus 272 i~p~~-~v~IGDs~~Di~aA~~aG~~~v~V 300 (361)
..+.+ +++|||+..|++||+++|+.++.|
T Consensus 115 ~~~~~i~~~igD~~~dv~a~~~~Gi~~~~V 144 (149)
T d1ltqa1 115 APHFDVKLAIDDRTQVVEMWRRIGVECWQV 144 (149)
T ss_dssp TTTCEEEEEEECCHHHHHHHHHTTCCEEEC
T ss_pred cCCCceEEEEcCCHHHHHHHHHCCCcEEEe
Confidence 66666 467899999999999999999998
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.19 E-value=4.2e-11 Score=104.09 Aligned_cols=62 Identities=13% Similarity=-0.018 Sum_probs=51.1
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChh
Q 018088 257 ESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFN 320 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~ 320 (361)
.+|+..+..+++++|++++++++|||+.||+.|++.||.++++ ++..+.....|++++.+..
T Consensus 151 ~~K~~al~~l~~~~~i~~~~~~~iGD~~NDi~ml~~ag~~vav--~na~~~~k~~A~~v~~~~~ 212 (230)
T d1wr8a_ 151 INKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAV--AQAPKILKENADYVTKKEY 212 (230)
T ss_dssp CCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEEEEC--TTSCHHHHTTCSEECSSCH
T ss_pred cCcchhhcccccccccchhheeeeecCccHHHHHHHCCeEEEE--CCCCHHHHHhCCEEECCCC
Confidence 4578899999999999999999999999999999999986443 3444444567999998754
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.11 E-value=2.2e-10 Score=102.54 Aligned_cols=61 Identities=15% Similarity=0.015 Sum_probs=50.5
Q ss_pred ChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhh
Q 018088 259 MAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNE 321 (361)
Q Consensus 259 KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~E 321 (361)
|...+..++++++++++++++|||+.||+.|.+.+|.+.++ ++........|++++.+..+
T Consensus 198 K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am--~na~~~lk~~a~~i~~~~~~ 258 (271)
T d1rkqa_ 198 KGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAV--DNAIPSVKEVANFVTKSNLE 258 (271)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC--TTSCHHHHHHCSEECCCTTT
T ss_pred cccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEe--CCCCHHHHHhCCEEcCCCCc
Confidence 55678999999999999999999999999999999977655 44444444578999987766
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.08 E-value=3e-10 Score=99.23 Aligned_cols=61 Identities=8% Similarity=-0.088 Sum_probs=49.1
Q ss_pred CChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChh
Q 018088 258 SMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFN 320 (361)
Q Consensus 258 ~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~ 320 (361)
.|...+..+++++|+++++|++|||+.||+.|++.+|.++++ ++..+.....||++++.-.
T Consensus 151 ~K~~ai~~l~~~~~i~~~~v~~~GDs~nD~~m~~~a~~~vav--~na~~~~k~~ad~v~~~~~ 211 (225)
T d1l6ra_ 151 DKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACP--ANATDNIKAVSDFVSDYSY 211 (225)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEEC--TTSCHHHHHHCSEECSCCT
T ss_pred chHHHHHHHhhhhccchhheeeecCCcchHHHHHHCCeEEEE--CCCcHHHHHhCCEEECCCC
Confidence 467789999999999999999999999999999999976543 3334444456899886553
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.05 E-value=3.7e-10 Score=101.67 Aligned_cols=62 Identities=15% Similarity=0.014 Sum_probs=52.2
Q ss_pred CChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhh
Q 018088 258 SMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNE 321 (361)
Q Consensus 258 ~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~E 321 (361)
.|...+..+++++|++++++++|||+.||+.|.+.+|.++++ +++.+.....|++++.+..+
T Consensus 213 ~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam--~na~~~~k~~A~~v~~~~~~ 274 (285)
T d1nrwa_ 213 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAM--GNAREDIKSIADAVTLTNDE 274 (285)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEEC--TTCCHHHHHHCSEECCCGGG
T ss_pred hhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEe--CCCCHHHHHhCCEEcCCCCc
Confidence 467789999999999999999999999999999999988655 44455555679999987664
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=98.94 E-value=2.2e-09 Score=92.62 Aligned_cols=92 Identities=13% Similarity=0.153 Sum_probs=66.1
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCC---HHHHHHHH-HhCCCC--cccceeEecCCCCCCChHHHHHHHHHcCCCCC
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLD---RRKMVEAL-ERMGLL--KYFQAIVSEEDGMESMAHRFLSAAVKLDRKPS 275 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~---~~~~~~~L-~~lgl~--~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~ 275 (361)
..+.||+.++++.++++|+++.+|||.. +..+...| +.+|+- ..-+.++..++ ..|..--..+ +++++
T Consensus 85 A~p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~--~~K~~rr~~I-k~y~I--- 158 (209)
T d2b82a1 85 SIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDK--PGQNTKSQWL-QDKNI--- 158 (209)
T ss_dssp CEECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCC--TTCCCSHHHH-HHTTE---
T ss_pred cCcchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCCC--CCchHHHHHH-HHcCe---
Confidence 3678999999999999999999999954 33344444 457773 33344555443 2232222222 56776
Q ss_pred cEEEEcCChHHHHHHHHcCCeEEEE
Q 018088 276 KCVVFEDDPRAITAAHNCTMMAVGL 300 (361)
Q Consensus 276 ~~v~IGDs~~Di~aA~~aG~~~v~V 300 (361)
++++||..+|+.+|.++|+.+|-|
T Consensus 159 -~l~~GD~l~Df~aA~eagi~~iRi 182 (209)
T d2b82a1 159 -RIFYGDSDNDITAARDVGARGIRI 182 (209)
T ss_dssp -EEEEESSHHHHHHHHHTTCEEEEC
T ss_pred -EEEecCCHHHHhHHHHcCCCceEe
Confidence 889999999999999999999987
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=98.91 E-value=1.1e-09 Score=97.73 Aligned_cols=72 Identities=13% Similarity=0.028 Sum_probs=56.5
Q ss_pred CChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhh--hHHHHHHhhHh
Q 018088 258 SMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNE--LSVINLRRLFA 332 (361)
Q Consensus 258 ~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~E--L~~~ll~~l~~ 332 (361)
.|...+..+++++|++++++++|||+.||+.|.+.+|.++++ ++..+.....|++++.+.+| +...+ +.++.
T Consensus 190 sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam--~Na~~~lk~~A~~v~~~~~~~Gva~~i-~~~l~ 263 (269)
T d1rlma_ 190 HKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAM--GNAAENIKQIARYATDDNNHEGALNVI-QAVLD 263 (269)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEC--TTCCHHHHHHCSEECCCGGGTHHHHHH-HHHHH
T ss_pred HHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEe--CCCCHHHHHhCCEEcCCCCccHHHHHH-HHHHh
Confidence 366789999999999999999999999999999999988776 44444445679999998765 44443 33433
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.85 E-value=5.3e-09 Score=93.43 Aligned_cols=72 Identities=10% Similarity=0.012 Sum_probs=54.2
Q ss_pred CChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCCh--hhhHHHHHHhhH
Q 018088 258 SMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANF--NELSVINLRRLF 331 (361)
Q Consensus 258 ~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl--~EL~~~ll~~l~ 331 (361)
.|...+..+++.++++++++++|||+.||+.|.+.+|.++++ ++..+.....|++++.+- +.....+++++|
T Consensus 207 ~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~--~na~~~~k~~a~~v~~~~~~~g~v~~~l~~~~ 280 (283)
T d2b30a1 207 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAV--ANATDSAKSHAKCVLPVSHREGAVAYLLKKVF 280 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEEC--TTCCHHHHHHSSEECSSCTTTTHHHHHHHHHH
T ss_pred hhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEe--CCCCHHHHHhCCEEECCcCCCcHHHHHHHHHH
Confidence 356688999999999999999999999999999999987654 444454455689998643 233444555554
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.77 E-value=8.4e-09 Score=93.99 Aligned_cols=95 Identities=14% Similarity=0.154 Sum_probs=68.5
Q ss_pred CCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEec----CCCC------------CCChHHHH
Q 018088 201 VTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSE----EDGM------------ESMAHRFL 264 (361)
Q Consensus 201 ~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~----e~~~------------~~KP~~~~ 264 (361)
...+.||+.++++.|+++|++++|+|+|....++.+++++|+...--.+++. ++.. ..|-....
T Consensus 133 ~i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~l~f~~~~~~~~~~~~~i~~~~K~~~~~ 212 (291)
T d2bdua1 133 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGAL 212 (291)
T ss_dssp CCCBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHHH
T ss_pred CCCcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEEeeEEEEeCCeeEeeccCCccccccCcchhh
Confidence 4578999999999999999999999999999999999999885421123331 1111 11223343
Q ss_pred HHHHHc--CCCCCcEEEEcCChHHHHHHHHcCC
Q 018088 265 SAAVKL--DRKPSKCVVFEDDPRAITAAHNCTM 295 (361)
Q Consensus 265 ~~~~kl--gi~p~~~v~IGDs~~Di~aA~~aG~ 295 (361)
.....+ .-...++|++|||.+|+.||..+..
T Consensus 213 ~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~ 245 (291)
T d2bdua1 213 KNTDYFSQLKDNSNIILLGDSQGDLRMADGVAN 245 (291)
T ss_dssp TTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSC
T ss_pred hhHHHHhccCCcCcEEEEeCCHhHHHHHhCCcc
Confidence 433333 3356789999999999999987643
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.76 E-value=1.2e-08 Score=86.27 Aligned_cols=117 Identities=18% Similarity=0.219 Sum_probs=90.5
Q ss_pred HHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHH
Q 018088 212 LDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAH 291 (361)
Q Consensus 212 L~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~ 291 (361)
++.|+..|+.++++|+.....+....+.+++...+ .+ ...|...+..+++++|+++++|++|||+.||+.+.+
T Consensus 41 i~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~~~----~~---~~~K~~~l~~~~~~~~i~~~~v~~vGDd~nDl~~l~ 113 (177)
T d1k1ea_ 41 IKMLMDADIQVAVLSGRDSPILRRRIADLGIKLFF----LG---KLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFA 113 (177)
T ss_dssp HHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCEEE----ES---CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHH
T ss_pred HHHHhhhcEEEEEecCCchhHHHHHHhhhcccccc----cc---cccHHHHHHHHHHHhcCCcceeEEecCCccHHHHHh
Confidence 67788899999999999889999999988874432 22 245778899999999999999999999999999999
Q ss_pred HcCCeEEEEeCCCCcccccCcceEeCC------hhhhHHHHHHhhHhcCCCChhh
Q 018088 292 NCTMMAVGLIGAHRAYDLVQADLAVAN------FNELSVINLRRLFANKGSTFME 340 (361)
Q Consensus 292 ~aG~~~v~V~g~~~~~~l~~ad~vi~s------l~EL~~~ll~~l~~~~~~~~~~ 340 (361)
.+|..++. ++........||++..+ +.|+.++++ -+++.++..|
T Consensus 114 ~~g~siap--~nA~~~vk~~A~~Vt~~~GG~GavrE~~e~il---~~~~~~~~~~ 163 (177)
T d1k1ea_ 114 ACGTSFAV--ADAPIYVKNAVDHVLSTHGGKGAFREMSDMIL---QAQGKSSVFD 163 (177)
T ss_dssp HSSEEEEC--TTSCHHHHTTSSEECSSCTTTTHHHHHHHHHH---HHTTCTHHHH
T ss_pred hCCeEEEc--CCccHHHHHhCCEEeCCCCCCchHHHHHHHHH---HHCCChHHHH
Confidence 99987655 44445555679999887 555555444 3456665554
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.72 E-value=5.9e-08 Score=78.20 Aligned_cols=111 Identities=13% Similarity=0.149 Sum_probs=78.9
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcC
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFED 282 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGD 282 (361)
++.|++.+.++.|++.|+++.++|+.....+...-+.+|+..+| .. -.|+-.....+++... ..+.|+||
T Consensus 21 ~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~~v~----~~-----~~p~~k~~~v~~~q~~-~~v~~vGD 90 (135)
T d2b8ea1 21 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVI----AE-----VLPHQKSEEVKKLQAK-EVVAFVGD 90 (135)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEE----CS-----CCHHHHHHHHHHHTTT-SCEEEEEC
T ss_pred CCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhhhhc----cc-----cchhHHHHHHHHHHcC-CEEEEEeC
Confidence 57999999999999999999999999999999999999985433 21 3355444444555443 57889999
Q ss_pred ChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeC--ChhhhHHH
Q 018088 283 DPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVA--NFNELSVI 325 (361)
Q Consensus 283 s~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~--sl~EL~~~ 325 (361)
+.||..+.+.|+++.+. +.........+|+++. ++..+...
T Consensus 91 g~nD~~aL~~Advgia~--~~~~~~~~~aADivl~~~~l~~i~~a 133 (135)
T d2b8ea1 91 GINDAPALAQADLGIAV--GSGSDVAVESGDIVLIRDDLRDVVAA 133 (135)
T ss_dssp SSSSHHHHHHSSEEEEE--CCC--------SEEESSCCTHHHHHH
T ss_pred CCCcHHHHHhCCeeeec--CccCHHHHHhCCEEEECCCHHHHHHH
Confidence 99999999999987544 3333333456888884 56666543
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.70 E-value=1.4e-09 Score=97.47 Aligned_cols=63 Identities=11% Similarity=0.073 Sum_probs=53.8
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhh
Q 018088 257 ESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNE 321 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~E 321 (361)
..|...+..+++++|++++++++|||+.||+.|.+.+|.++++ ++........|++++.+..|
T Consensus 189 ~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~--~na~~~~k~~A~~i~~~~~~ 251 (267)
T d1nf2a_ 189 VDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAM--ENAIEKVKEASDIVTLTNND 251 (267)
T ss_dssp CCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEEC--TTSCHHHHHHCSEECCCTTT
T ss_pred CchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEe--CCCCHHHHHhCCEEcCCCCc
Confidence 4588999999999999999999999999999999999987554 44455555679999998776
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.60 E-value=6.8e-08 Score=83.93 Aligned_cols=61 Identities=5% Similarity=-0.081 Sum_probs=44.7
Q ss_pred ChHHHHHHHHHc-CCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhhhHHH
Q 018088 259 MAHRFLSAAVKL-DRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNELSVI 325 (361)
Q Consensus 259 KP~~~~~~~~kl-gi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~EL~~~ 325 (361)
|...+..+++++ ++.+++|++|||+.||++|.+.||.++++ ++...+.. -.++++.|+..+
T Consensus 180 K~~al~~l~~~~~~~~~~~~~a~GD~~ND~~Ml~~a~~~va~--~Na~~~~~----~~~~~i~~~~~~ 241 (243)
T d1wzca1 180 KGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIV--GSLKHKKA----QNVSSIIDVLEV 241 (243)
T ss_dssp HHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEE--SSCCCTTC----EEESCHHHHHHH
T ss_pred cHHHHHHHHHHhcCCCcccEEEEcCCHhHHHHHHcCCcEEEe--CCCChHHH----hhhhHHHHHHHh
Confidence 445678889988 48899999999999999999999977665 33322222 245566666554
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.52 E-value=3.4e-08 Score=87.68 Aligned_cols=63 Identities=14% Similarity=0.140 Sum_probs=52.2
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhh
Q 018088 257 ESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNE 321 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~E 321 (361)
..|...+..+++++|++++++++|||+.||+.|.+.+|..+++ +++.+.....|++++.+..+
T Consensus 185 ~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav--~na~~~lk~~A~~vt~~~~~ 247 (260)
T d2rbka1 185 DTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAM--GQAKEDVKAAADYVTAPIDE 247 (260)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC--TTSCHHHHHHSSEECCCGGG
T ss_pred CCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEe--CCCCHHHHHhCCEEeCCCCc
Confidence 3588899999999999999999999999999999999997544 44444555678999887554
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.40 E-value=3.2e-07 Score=78.30 Aligned_cols=93 Identities=14% Similarity=0.154 Sum_probs=72.5
Q ss_pred CCccHHHHHHHHhhCCCcEEEEeCCC--------H----HHHHHHHHhCCCCcccceeEecCCCCCCCh--HHHHHHHHH
Q 018088 204 PMEGLQEWLDAVSSARIPCAVVSGLD--------R----RKMVEALERMGLLKYFQAIVSEEDGMESMA--HRFLSAAVK 269 (361)
Q Consensus 204 ~~pgv~elL~~L~~~Gi~vaivSn~~--------~----~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP--~~~~~~~~k 269 (361)
++|++.+.|+.|.+.|+.++|+||.. . .....+++.++. .++.+++......+|| -++..++++
T Consensus 51 l~~~v~~~i~~L~~~gy~iiIvTNQ~gI~rg~~s~~~~~~~~~~i~~~l~~--~~~i~~~~~~~~~RKP~~GM~~~~~~~ 128 (195)
T d1yj5a1 51 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGV--PFQVLVATHAGLNRKPVSGMWDHLQEQ 128 (195)
T ss_dssp SCTTHHHHHHHHHHHTCEEEEEEECHHHHHTSSCHHHHHHHHHHHHHHHTS--CCEEEEECSSSSSSTTSTHHHHHHHHT
T ss_pred ccCCHHHHHHHHHhCCcEEEEecCcchhccCCcCHHHHHHHHHHHHHHcCC--CccEEEecCccccCCCccHHHHHHHHH
Confidence 47999999999999999999999952 2 224445555665 3456666666666676 588999998
Q ss_pred cC----CCCCcEEEEcCCh-----------------HHHHHHHHcCCeEE
Q 018088 270 LD----RKPSKCVVFEDDP-----------------RAITAAHNCTMMAV 298 (361)
Q Consensus 270 lg----i~p~~~v~IGDs~-----------------~Di~aA~~aG~~~v 298 (361)
++ ++.++++||||.. .|+..|+|+|+...
T Consensus 129 ~n~~~~id~~~S~~IGD~~gr~~~~~~~~~~~D~S~sD~~fA~N~gikF~ 178 (195)
T d1yj5a1 129 ANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFA 178 (195)
T ss_dssp SSSSCCCCGGGCEEECSCCCBCTTSBTTBCSCCSCCHHHHHHHHHTCCEE
T ss_pred hcccccCCcCceEEEeCccCccccccccccccCcchhHHHHHHHCCCccc
Confidence 85 7889999999954 89999999999854
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=98.32 E-value=1.7e-06 Score=72.11 Aligned_cols=123 Identities=11% Similarity=0.107 Sum_probs=86.2
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCccc----ceeEecCCC------------------CCCCh
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYF----QAIVSEEDG------------------MESMA 260 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~F----d~iv~~e~~------------------~~~KP 260 (361)
+|.|++.+.++.|++.|+++.++|+.....+...-+.+|+...- +..+.+++. ..-.|
T Consensus 20 p~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~p 99 (168)
T d1wpga2 20 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEP 99 (168)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEESCCH
T ss_pred CCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccccccccccccchhhHHHHhhhhhhhhhhhccch
Confidence 67999999999999999999999999999999999999985432 112222111 01246
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCC--hhhhHHHHH
Q 018088 261 HRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVAN--FNELSVINL 327 (361)
Q Consensus 261 ~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~s--l~EL~~~ll 327 (361)
+--..+++.+.-....+.|+||+.||..+.+.|.++... +.........+|+++.+ |..+..++.
T Consensus 100 ~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~--~~gt~~a~~aAdivl~~~~l~~v~~~I~ 166 (168)
T d1wpga2 100 SHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAM--GSGTAVAKTASEMVLADDNFSTIVAAVE 166 (168)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEE--TTSCHHHHHTCSEEETTCCTHHHHHHHH
T ss_pred hHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEEEe--ccccHHHHHhCCEEEccCCHHHHHHHHH
Confidence 533444444444446799999999999999999976544 33333333468888765 666665543
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.23 E-value=4.9e-07 Score=78.97 Aligned_cols=43 Identities=14% Similarity=0.077 Sum_probs=39.1
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEE
Q 018088 257 ESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVG 299 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~ 299 (361)
..|...+..+++++|+++++|++|||+.||+.|.+.+|..++.
T Consensus 161 ~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav 203 (244)
T d1s2oa1 161 SNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIV 203 (244)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEEC
T ss_pred cchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEEEe
Confidence 4578899999999999999999999999999999999976554
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.04 E-value=1.1e-05 Score=68.73 Aligned_cols=42 Identities=19% Similarity=0.325 Sum_probs=37.4
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCc
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLK 244 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~ 244 (361)
.+.+.+.+.|++|+++|++++++|+.+...+...++.+++..
T Consensus 21 ~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~~ 62 (232)
T d1xvia_ 21 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQG 62 (232)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTT
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccCC
Confidence 456778899999999999999999999999999999988754
|
| >d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5'(3')-deoxyribonucleotidase (dNT-2) domain: 5'(3')-deoxyribonucleotidase (dNT-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.94 E-value=1.4e-05 Score=67.44 Aligned_cols=113 Identities=13% Similarity=0.087 Sum_probs=73.4
Q ss_pred ccCCCCCccHHHHHHHHhhCC-CcEEEEeCCCHH------HHHHHHHhC-CCCcccceeEecCCCCCCChHHHHHHHHHc
Q 018088 199 LSVTEPMEGLQEWLDAVSSAR-IPCAVVSGLDRR------KMVEALERM-GLLKYFQAIVSEEDGMESMAHRFLSAAVKL 270 (361)
Q Consensus 199 ~~~~~~~pgv~elL~~L~~~G-i~vaivSn~~~~------~~~~~L~~l-gl~~~Fd~iv~~e~~~~~KP~~~~~~~~kl 270 (361)
....+|+||+.++++.|++.| +.+.++|..... .-...|+++ +-..+...+++.+ |-
T Consensus 70 f~~L~p~~gA~e~l~~L~~~~~~~v~i~t~~~~~~~~~~~~k~~Wl~~~~~~~~~~~~~~t~~-----K~---------- 134 (195)
T d1q92a_ 70 FFELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFGPDFLEQIVLTRD-----KT---------- 134 (195)
T ss_dssp TTTCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHCGGGGGGEEECSC-----ST----------
T ss_pred HhhCCcccCHHHHHHHHhhccCccceEEccccccCcchHHHHHHHHHHhcCCCCccEEEEccc-----cc----------
Confidence 345689999999999999865 467788875421 222345554 3322223444432 31
Q ss_pred CCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCccc-ccCcceEeCChhhhHHHHHH
Q 018088 271 DRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYD-LVQADLAVANFNELSVINLR 328 (361)
Q Consensus 271 gi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~-l~~ad~vi~sl~EL~~~ll~ 328 (361)
.+.. -++|+|++..+.++.++|+.++.+..+++... ....-..+.++.|+...+++
T Consensus 135 ~~~~--d~lIDD~p~n~~~~~~~g~~~il~~~~~N~~~~~~~~~~Rv~~W~e~~~~il~ 191 (195)
T d1q92a_ 135 VVSA--DLLIDDRPDITGAEPTPSWEHVLFTACHNQHLQLQPPRRRLHSWADDWKAILD 191 (195)
T ss_dssp TSCC--SEEEESCSCCCCSCSSCSSEEEEECCTTTTTCCCCTTCEEECCTTSCHHHHHH
T ss_pred eecC--eEEecCcHHHHHHHhcCCCeEEEECCCcccCCCCCCCceeeCCHHHHHHHHHh
Confidence 1222 28999999999999999999998754444432 22345789999998777665
|
| >d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5' nucleotidase-like domain: Cytosolic IMP-GMP specific 5'-nucleotidase species: Legionella pneumophila [TaxId: 446]
Probab=97.73 E-value=5.3e-05 Score=71.92 Aligned_cols=96 Identities=8% Similarity=0.010 Sum_probs=78.2
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhC---------CCCcccceeEecCCCCCCChH------------
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERM---------GLLKYFQAIVSEEDGMESMAH------------ 261 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~l---------gl~~~Fd~iv~~e~~~~~KP~------------ 261 (361)
..-|.+..+|+.|+++|-++.++||+.-.++...++.+ ...++||.||+.. .||.
T Consensus 185 ~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~m~y~~~~~~~~g~dWr~lFDvVIv~A----~KP~FF~~~~~~~~v~ 260 (458)
T d2bdea1 185 IREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLA----NKPRFFYDNLRFLSVN 260 (458)
T ss_dssp ECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHHGGGSCTTCCGGGTEEEEEESC----CHHHHHHSCCCEEEEC
T ss_pred cCChhHHHHHHHHHHcCCeEEEEecCcHHHHHHHhhhhcccCCCCCCChHHhceEEEeCC----CCCCccCCCCcceEEe
Confidence 44788999999999999999999999999998888863 4567899988862 2221
Q ss_pred ---------------------HHHHHHHHcCCCCCcEEEEcCChH-HHHHHH-HcCCeEEEEeC
Q 018088 262 ---------------------RFLSAAVKLDRKPSKCVVFEDDPR-AITAAH-NCTMMAVGLIG 302 (361)
Q Consensus 262 ---------------------~~~~~~~klgi~p~~~v~IGDs~~-Di~aA~-~aG~~~v~V~g 302 (361)
......+-+|....+|++|||+.- ||..++ ..|+.|++|..
T Consensus 261 ~~~g~l~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~ 324 (458)
T d2bdea1 261 PENGTMTNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVE 324 (458)
T ss_dssp TTTCCEEECCSCCCSEEEEECCHHHHHHHTTCCGGGEEEEESSCCSCHHHHHHHHCSEEEEECT
T ss_pred CCCCccccCCccccCCccccCCHHHHHHHhCCCCCcEEEECCccchhhhhhhhhcCCceEEehH
Confidence 256777888999899999999987 977775 57999999853
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.57 E-value=0.00016 Score=62.28 Aligned_cols=139 Identities=12% Similarity=0.060 Sum_probs=103.4
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecC----C-----------------------
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEE----D----------------------- 254 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e----~----------------------- 254 (361)
..+.||+.+.|+.+.+. .+.+|+|.+-+.+++++.+.+|+- +. ..+.+ +
T Consensus 80 ~~lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp--~e-~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~~~ 155 (308)
T d1y8aa1 80 AKFVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVR--GE-LHGTEVDFDSIAVPEGLREELLSIIDVIASLSG 155 (308)
T ss_dssp CCBCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCC--SE-EEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCH
T ss_pred eeecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCC--ce-eecccccccccCCChHHHHHHHHHhhhccCccH
Confidence 47899999999999988 999999999999999999998873 32 22211 0
Q ss_pred -------------------------CC-CCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCC-eEEEEeCCCCcc
Q 018088 255 -------------------------GM-ESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTM-MAVGLIGAHRAY 307 (361)
Q Consensus 255 -------------------------~~-~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~-~~v~V~g~~~~~ 307 (361)
++ ..|..+....++..++.+. ++||||..|++|.+.+.- +.++|.-+++..
T Consensus 156 eel~e~~d~~f~~~e~~~i~e~Vk~VGgg~k~~i~~~~~~~~~~~~~--~~VGDSITDve~Lr~~r~~gGlaIsFNGN~Y 233 (308)
T d1y8aa1 156 EELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFP--VVVGDSISDYKMFEAARGLGGVAIAFNGNEY 233 (308)
T ss_dssp HHHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSC--EEEECSGGGHHHHHHHHHTTCEEEEESCCHH
T ss_pred HHHHHHHHHHhccchHhhHHhhhcccCCchhHHHHHhhcccccCCcc--eeccCccccHHHHHHHhcCCCeeEEecCccc
Confidence 00 0123356667788888775 999999999999888733 344444455677
Q ss_pred cccCcceEeCChhhhHHHHHHhhHhcCCCChhhHHhhhc
Q 018088 308 DLVQADLAVANFNELSVINLRRLFANKGSTFMERQKQIV 346 (361)
Q Consensus 308 ~l~~ad~vi~sl~EL~~~ll~~l~~~~~~~~~~l~~~~~ 346 (361)
.+..|++.|-+-+.+....+--+|.+++-+.|.+-+++.
T Consensus 234 al~eA~VaiiS~~~~a~~~i~dlf~~~~~~Afei~~~~~ 272 (308)
T d1y8aa1 234 ALKHADVVIISPTAMSEAKVIELFMERKERAFEVLSAVS 272 (308)
T ss_dssp HHTTCSEEEECSSTHHHHHHHHHHHHHGGGGGGGGGGCC
T ss_pred cccccceEEeccchhHHHHHHHHHhcCcHHHHHHHHHhc
Confidence 788899999998888877777788777777777655554
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=96.30 E-value=0.0047 Score=51.36 Aligned_cols=60 Identities=17% Similarity=0.149 Sum_probs=44.9
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeE-EEEeCCCCcccccCcceEeCChhhhHHHH
Q 018088 257 ESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMA-VGLIGAHRAYDLVQADLAVANFNELSVIN 326 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~-v~V~g~~~~~~l~~ad~vi~sl~EL~~~l 326 (361)
..|...++.++++ +++++|||+.||+.|.+.+|.+. |++ |.. ...|++.+++.+|+..++
T Consensus 158 ~~Kg~al~~l~~~-----~~~i~~GDs~ND~~Mf~~~~~~~av~~-g~~----~~~A~~~~~~~~ev~~~l 218 (229)
T d1u02a_ 158 VNKGSAIRSVRGE-----RPAIIAGDDATDEAAFEANDDALTIKV-GEG----ETHAKFHVADYIEMRKIL 218 (229)
T ss_dssp CCHHHHHHHHHTT-----SCEEEEESSHHHHHHHHTTTTSEEEEE-SSS----CCCCSEEESSHHHHHHHH
T ss_pred CCHHHHHHHHhcc-----ccceeecCCCChHHHHhccCCeEEEEe-CCC----CccCeEEcCCHHHHHHHH
Confidence 4577777777653 68999999999999999998753 332 322 246899999999976643
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.06 E-value=0.0026 Score=53.23 Aligned_cols=38 Identities=5% Similarity=-0.060 Sum_probs=29.5
Q ss_pred hHHHHHHHHHcCCCCCcEEEEcCC----hHHHHHHHHcCCeEEEE
Q 018088 260 AHRFLSAAVKLDRKPSKCVVFEDD----PRAITAAHNCTMMAVGL 300 (361)
Q Consensus 260 P~~~~~~~~klgi~p~~~v~IGDs----~~Di~aA~~aG~~~v~V 300 (361)
...+..+++ .+++++++|||+ .||++|.+.||...++|
T Consensus 187 g~al~~L~~---~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av 228 (244)
T d2fuea1 187 RYCLDSLDQ---DSFDTIHFFGNETSPGGNDFEIFADPRTVGHSV 228 (244)
T ss_dssp THHHHHHTT---SCCSEEEEEESCCSTTSTTHHHHHSTTSEEEEC
T ss_pred HHHHHHHhc---CChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEc
Confidence 334555553 588999999996 59999999999766665
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=95.68 E-value=0.011 Score=45.71 Aligned_cols=48 Identities=13% Similarity=0.129 Sum_probs=39.3
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCC---------------HHHHHHHHHhCCCCcccceeEec
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLD---------------RRKMVEALERMGLLKYFQAIVSE 252 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~---------------~~~~~~~L~~lgl~~~Fd~iv~~ 252 (361)
.|.+++.+.|..|++.|+++.+.|... ...+...|+..|+ .||.++.+
T Consensus 24 ~P~~~~Ie~l~~l~~~G~~Iii~TaR~~~~~~~~~~~~~~~~~~~T~~wL~~~gI--~Yd~Li~g 86 (124)
T d1xpja_ 24 LPRLDVIEQLREYHQLGFEIVISTARNMRTYEGNVGKINIHTLPIITEWLDKHQV--PYDEILVG 86 (124)
T ss_dssp CBCHHHHHHHHHHHHTTCEEEEEECTTTTTTTTCHHHHHHHTHHHHHHHHHHTTC--CCSEEEEC
T ss_pred CcCHHHHHHHHHHHHCCCEEEEEecCCccccCCcHHHHHHHHHHHHHHHHHHcCC--CceEEEEC
Confidence 689999999999999999999999863 3457777888898 34776654
|
| >d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NLI interacting factor-like phosphatase domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.68 E-value=0.0019 Score=53.51 Aligned_cols=93 Identities=10% Similarity=0.181 Sum_probs=69.9
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEc
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFE 281 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IG 281 (361)
+...||+.++|+.+.+. +.++|.|.+.+.++..+++.+.-...|...+..+.....+.. +.+-++.+|.+.+++|+|+
T Consensus 54 v~~RP~l~eFL~~l~~~-yei~I~Ta~~~~YA~~il~~ldp~~~~~~~~~r~~c~~~~~~-~~KdL~~l~~~l~~vvivD 131 (181)
T d1ta0a_ 54 VLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKWGAFRARLFRESCVFHRGN-YVKDLSRLGRDLRRVLILD 131 (181)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCSSCCEEEEECGGGSEEETTE-EECCGGGSCSCGGGEEEEC
T ss_pred EecCCCHHHHHHHHHhc-eEEEEEcCCcHHHHHHHHHHhccCCceeEEEEeeeeeecCCc-ccccHhhcCCCHHHeEEEc
Confidence 35699999999999988 999999999999999999999887777776666543322221 2234567788999999999
Q ss_pred CChHHHHHHHHcCCe
Q 018088 282 DDPRAITAAHNCTMM 296 (361)
Q Consensus 282 Ds~~Di~aA~~aG~~ 296 (361)
|++.-...-...|+.
T Consensus 132 d~~~~~~~~~~N~I~ 146 (181)
T d1ta0a_ 132 NSPASYVFHPDNAVP 146 (181)
T ss_dssp SCGGGGTTCGGGBCC
T ss_pred CChhhhhcCccCeeE
Confidence 998754433333443
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.07 E-value=0.014 Score=48.68 Aligned_cols=41 Identities=7% Similarity=-0.075 Sum_probs=30.7
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEcC----ChHHHHHHHHcCCeEEEE
Q 018088 257 ESMAHRFLSAAVKLDRKPSKCVVFED----DPRAITAAHNCTMMAVGL 300 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p~~~v~IGD----s~~Di~aA~~aG~~~v~V 300 (361)
..|...+.++ ++++++++++||| |.||++|.+++|..+++|
T Consensus 184 vsKg~al~~l---~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v 228 (243)
T d2amya1 184 WDKRYCLRHV---ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSV 228 (243)
T ss_dssp CSGGGGGGGT---TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEEC
T ss_pred cCHHHHHHHH---hCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEe
Confidence 3466655554 3678999999999 779999999999666664
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.46 E-value=0.087 Score=43.37 Aligned_cols=28 Identities=11% Similarity=0.079 Sum_probs=18.5
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHH
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFE 146 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~ 146 (361)
.|+++||+| ||++......+...+++++
T Consensus 3 ~kl~~fDlDGTLl~~~~~i~~~~~~al~~ 31 (243)
T d2amya1 3 PALCLFDVDGTLTAPRQKITKEMDDFLQK 31 (243)
T ss_dssp SEEEEEESBTTTBCTTSCCCHHHHHHHHH
T ss_pred CEEEEEcCcCCeeCCCCcCCHHHHHHHHH
Confidence 589999999 9998654333334444433
|