Citrus Sinensis ID: 018126
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 360 | 2.2.26 [Sep-21-2011] | |||||||
| O64765 | 502 | Probable UDP-N-acetylgluc | no | no | 0.994 | 0.713 | 0.745 | 1e-164 | |
| Q28CH3 | 511 | UDP-N-acetylhexosamine py | yes | no | 0.888 | 0.626 | 0.451 | 2e-72 | |
| Q91YN5 | 522 | UDP-N-acetylhexosamine py | yes | no | 0.894 | 0.616 | 0.448 | 5e-70 | |
| Q16222 | 522 | UDP-N-acetylhexosamine py | yes | no | 0.883 | 0.609 | 0.441 | 5e-67 | |
| Q7ZWD4 | 505 | UDP-N-acetylhexosamine py | no | no | 0.891 | 0.635 | 0.422 | 2e-65 | |
| O74933 | 486 | UDP-N-acetylglucosamine p | N/A | no | 0.902 | 0.668 | 0.391 | 3e-65 | |
| Q54GN5 | 487 | Probable UDP-N-acetylgluc | yes | no | 0.883 | 0.652 | 0.404 | 1e-63 | |
| Q3KQV9 | 507 | UDP-N-acetylhexosamine py | no | no | 0.905 | 0.642 | 0.425 | 3e-63 | |
| P43123 | 477 | UDP-N-acetylglucosamine p | yes | no | 0.855 | 0.645 | 0.4 | 6e-62 | |
| Q3TW96 | 507 | UDP-N-acetylhexosamine py | no | no | 0.747 | 0.530 | 0.462 | 5e-61 |
| >sp|O64765|UAP1_ARATH Probable UDP-N-acetylglucosamine pyrophosphorylase OS=Arabidopsis thaliana GN=At2g35020 PE=2 SV=1 | Back alignment and function desciption |
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Score = 576 bits (1484), Expect = e-164, Method: Compositional matrix adjust.
Identities = 272/365 (74%), Positives = 312/365 (85%), Gaps = 7/365 (1%)
Query: 1 MREPTVVGTESNGGSVGSIAQ------SPPPQALLERLKDYGQEDAFALWDELSPDERDH 54
M+EPT E +V +I + P QAL+ERLKDYGQED F+LWDELSP+ERD
Sbjct: 1 MKEPTT-EIEIETSAVATILPPPLPPTASPHQALVERLKDYGQEDVFSLWDELSPEERDL 59
Query: 55 LVKDIESLDLPRVDRIIRCSLRSQGLPVAAIEPVPERSVSTVEERTMDERERWWKMGLKA 114
L++DIE+LDLPR+DRIIRCSL SQGLPVAAIEPVPE VSTVEERT ++RE+WWKMGLKA
Sbjct: 60 LLRDIENLDLPRIDRIIRCSLHSQGLPVAAIEPVPENCVSTVEERTKEDREKWWKMGLKA 119
Query: 115 ISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEG 174
I +GKL V+LLSGGQGTRLGSSDPKGC NIGLPSGKSLFQ+QAERILCVQRLA+Q SE
Sbjct: 120 IYEGKLGVVLLSGGQGTRLGSSDPKGCYNIGLPSGKSLFQIQAERILCVQRLASQAMSEA 179
Query: 175 GGSGSAAIHWYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMET 234
+ I WYIMTSPFT + T+K+F+ HKYFGLE DQVTFFQQGT+PC+SKDG+FIMET
Sbjct: 180 SPTRPVTIQWYIMTSPFTHEPTQKFFKSHKYFGLEPDQVTFFQQGTLPCISKDGKFIMET 239
Query: 235 PYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKG 294
P+ ++KAPDGNGGVY+ALKSS+LLEDMA+RGIKY+DCYGVDN LVRVADPTFLGYFIDK
Sbjct: 240 PFSLSKAPDGNGGVYTALKSSRLLEDMASRGIKYVDCYGVDNVLVRVADPTFLGYFIDKS 299
Query: 295 VSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETGRLRFCWSNVC 354
++ AKVVRKAYPQEKVGVFVRRGKGGPLTVVEY+ELD S+ASA NQ+TGRL++CWSNVC
Sbjct: 300 AASAAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYTELDQSMASATNQQTGRLQYCWSNVC 359
Query: 355 TFAST 359
T
Sbjct: 360 LHMFT 364
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Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 7EC: .EC: 2EC: 3 |
| >sp|Q28CH3|UAP1L_XENTR UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 OS=Xenopus tropicalis GN=uap1l1 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q91YN5|UAP1_MOUSE UDP-N-acetylhexosamine pyrophosphorylase OS=Mus musculus GN=Uap1 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q16222|UAP1_HUMAN UDP-N-acetylhexosamine pyrophosphorylase OS=Homo sapiens GN=UAP1 PE=1 SV=3 | Back alignment and function description |
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| >sp|Q7ZWD4|UAP1L_DANRE UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 OS=Danio rerio GN=uap1l1 PE=2 SV=1 | Back alignment and function description |
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| >sp|O74933|UAP1_CANAX UDP-N-acetylglucosamine pyrophosphorylase OS=Candida albicans GN=UAP1 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q54GN5|UAP1_DICDI Probable UDP-N-acetylglucosamine pyrophosphorylase OS=Dictyostelium discoideum GN=uap1 PE=3 SV=1 | Back alignment and function description |
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| >sp|Q3KQV9|UAP1L_HUMAN UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 OS=Homo sapiens GN=UAP1L1 PE=1 SV=2 | Back alignment and function description |
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| >sp|P43123|UAP1_YEAST UDP-N-acetylglucosamine pyrophosphorylase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=QRI1 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q3TW96|UAP1L_MOUSE UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 OS=Mus musculus GN=Uap1l1 PE=2 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 360 | ||||||
| 217074416 | 492 | unknown [Medicago truncatula] gi|3884973 | 0.983 | 0.719 | 0.827 | 1e-170 | |
| 225423637 | 485 | PREDICTED: probable UDP-N-acetylglucosam | 0.930 | 0.690 | 0.883 | 1e-169 | |
| 356512205 | 490 | PREDICTED: probable UDP-N-acetylglucosam | 0.977 | 0.718 | 0.846 | 1e-169 | |
| 356524976 | 490 | PREDICTED: probable UDP-N-acetylglucosam | 0.977 | 0.718 | 0.838 | 1e-167 | |
| 449433495 | 503 | PREDICTED: probable UDP-N-acetylglucosam | 0.913 | 0.654 | 0.863 | 1e-167 | |
| 297823295 | 498 | UTP--glucose-1-phosphate uridylyltransfe | 0.997 | 0.720 | 0.763 | 1e-164 | |
| 9755397 | 498 | F17F8.1 [Arabidopsis thaliana] | 0.936 | 0.676 | 0.799 | 1e-163 | |
| 30692244 | 505 | N-acetylglucosamine-1-phosphate uridylyl | 0.936 | 0.667 | 0.799 | 1e-163 | |
| 295126562 | 505 | UTP:N-acetylglucosamine-1-P uridylyltran | 0.936 | 0.667 | 0.799 | 1e-163 | |
| 297846082 | 500 | F17F8.1 [Arabidopsis lyrata subsp. lyrat | 0.936 | 0.674 | 0.790 | 1e-162 |
| >gi|217074416|gb|ACJ85568.1| unknown [Medicago truncatula] gi|388497374|gb|AFK36753.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 602 bits (1553), Expect = e-170, Method: Compositional matrix adjust.
Identities = 297/359 (82%), Positives = 324/359 (90%), Gaps = 5/359 (1%)
Query: 1 MREPTVVGTESNGGSVGSIAQSPPPQALLERLKDYGQEDAFALWDELSPDERDHLVKDIE 60
MREP+ E+NGG V SPPPQALLERLKDYGQED F+LWDELS +ERD LVKDIE
Sbjct: 1 MREPSTAIIETNGGGV----SSPPPQALLERLKDYGQEDVFSLWDELSNEERDFLVKDIE 56
Query: 61 SLDLPRVDRIIRCSLRSQGLPVAAIEPVPERSVSTVEERTMDERERWWKMGLKAISDGKL 120
SLDL R+DRIIRCSLRSQGLP AAIEPVPE +VS VEER+ +ERERWWKMGLKAISDGK+
Sbjct: 57 SLDLSRIDRIIRCSLRSQGLPAAAIEPVPESNVSKVEERSQEERERWWKMGLKAISDGKV 116
Query: 121 AVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSA 180
AVLLLSGGQGTRLGSSDPKGC NIGLPSGKSLFQLQAERILCVQRLAA T+E S S
Sbjct: 117 AVLLLSGGQGTRLGSSDPKGCFNIGLPSGKSLFQLQAERILCVQRLAAHATNESSAS-SV 175
Query: 181 AIHWYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAK 240
IHWYIMTSPFTD+ATRK+FE HKYFGL+++QVTFF+QGTIPCVSKDGR I+ETPY+VAK
Sbjct: 176 QIHWYIMTSPFTDEATRKFFESHKYFGLDAEQVTFFRQGTIPCVSKDGRIILETPYRVAK 235
Query: 241 APDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAK 300
APDGNGGVYSALKS+KLLEDMA++GIKY+DCYGVDNALVRVADP+F+GYFIDKGV+A AK
Sbjct: 236 APDGNGGVYSALKSTKLLEDMASKGIKYVDCYGVDNALVRVADPSFIGYFIDKGVTAAAK 295
Query: 301 VVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETGRLRFCWSNVCTFAST 359
VVRKAYPQEKVGVFV+RGKGGPLTVVEYSELDPSLASA+NQ TGRLRFCWSNVC T
Sbjct: 296 VVRKAYPQEKVGVFVQRGKGGPLTVVEYSELDPSLASAVNQTTGRLRFCWSNVCLHMFT 354
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Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225423637|ref|XP_002276048.1| PREDICTED: probable UDP-N-acetylglucosamine pyrophosphorylase [Vitis vinifera] gi|297738002|emb|CBI27203.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356512205|ref|XP_003524811.1| PREDICTED: probable UDP-N-acetylglucosamine pyrophosphorylase-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|356524976|ref|XP_003531103.1| PREDICTED: probable UDP-N-acetylglucosamine pyrophosphorylase-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|449433495|ref|XP_004134533.1| PREDICTED: probable UDP-N-acetylglucosamine pyrophosphorylase-like [Cucumis sativus] gi|449490659|ref|XP_004158669.1| PREDICTED: probable UDP-N-acetylglucosamine pyrophosphorylase-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|297823295|ref|XP_002879530.1| UTP--glucose-1-phosphate uridylyltransferase family protein [Arabidopsis lyrata subsp. lyrata] gi|297325369|gb|EFH55789.1| UTP--glucose-1-phosphate uridylyltransferase family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|9755397|gb|AAF98204.1|AC000107_27 F17F8.1 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|30692244|ref|NP_564372.3| N-acetylglucosamine-1-phosphate uridylyltransferase 1 [Arabidopsis thaliana] gi|15450739|gb|AAK96641.1| At1g31070/F17F8_1 [Arabidopsis thaliana] gi|332193190|gb|AEE31311.1| N-acetylglucosamine-1-phosphate uridylyltransferase 1 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|295126562|gb|ADF80194.1| UTP:N-acetylglucosamine-1-P uridylyltransferase-1 [synthetic construct] | Back alignment and taxonomy information |
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| >gi|297846082|ref|XP_002890922.1| F17F8.1 [Arabidopsis lyrata subsp. lyrata] gi|297336764|gb|EFH67181.1| F17F8.1 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 360 | ||||||
| TAIR|locus:2015791 | 505 | GlcNAc1pUT1 "N-acetylglucosami | 0.922 | 0.657 | 0.783 | 1.4e-142 | |
| TAIR|locus:2044787 | 502 | GlcNAc1pUT2 "N-acetylglucosami | 0.980 | 0.703 | 0.725 | 1.9e-140 | |
| UNIPROTKB|G4MYL3 | 504 | MGG_15671 "Uncharacterized pro | 0.927 | 0.662 | 0.42 | 1.2e-65 | |
| ZFIN|ZDB-GENE-030131-1233 | 504 | uap1 "UDP-N-acteylglucosamine | 0.877 | 0.626 | 0.439 | 2e-63 | |
| FB|FBgn0259749 | 536 | mmy "mummy" [Drosophila melano | 0.902 | 0.606 | 0.405 | 1.8e-62 | |
| ASPGD|ASPL0000037237 | 505 | ungA [Emericella nidulans (tax | 0.883 | 0.629 | 0.415 | 6.2e-62 | |
| MGI|MGI:1334459 | 522 | Uap1 "UDP-N-acetylglucosamine | 0.877 | 0.605 | 0.444 | 3.4e-61 | |
| RGD|1561967 | 505 | Uap1 "UDP-N-acteylglucosamine | 0.877 | 0.625 | 0.438 | 3.9e-60 | |
| UNIPROTKB|F1P7W7 | 522 | UAP1 "Uncharacterized protein" | 0.869 | 0.599 | 0.442 | 5e-60 | |
| UNIPROTKB|F1S210 | 521 | UAP1 "Uncharacterized protein" | 0.869 | 0.600 | 0.445 | 5e-60 |
| TAIR|locus:2015791 GlcNAc1pUT1 "N-acetylglucosamine-1-phosphate uridylyltransferase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1394 (495.8 bits), Expect = 1.4e-142, P = 1.4e-142
Identities = 261/333 (78%), Positives = 291/333 (87%)
Query: 22 SPPPQALLERLKDYGQEDAFALWDELSPDERDHLVKDIESLDLPRVDRIIRCSLRSQGLP 81
S P QAL+ERLKDYGQED F+LWDELSPDE+D LV+DIE+LDLPR+DRIIRCSL SQGLP
Sbjct: 31 SSPRQALVERLKDYGQEDIFSLWDELSPDEKDFLVRDIENLDLPRIDRIIRCSLHSQGLP 90
Query: 82 VAAIEPVPERSVSTVEERTMDERERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGC 141
VAAIEPVPE VSTV+ RTM++RE+WWKMGLK I +GKL V+LLSGGQGTRLGSSDPKGC
Sbjct: 91 VAAIEPVPENWVSTVDGRTMEDREKWWKMGLKTIYEGKLGVVLLSGGQGTRLGSSDPKGC 150
Query: 142 VNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRKYFE 201
NIGLPSGKSLFQ+QAERILCVQRLAAQV SEG IHWYIMTSPFTD+ATRKYF
Sbjct: 151 FNIGLPSGKSLFQIQAERILCVQRLAAQVVSEGP-IRPVTIHWYIMTSPFTDEATRKYFS 209
Query: 202 GHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDM 261
HKYFGLE DQ++FFQQGT+PCV+KDG+FIMETP+ +AKAPDGNGGVY+ALK S+LLEDM
Sbjct: 210 SHKYFGLEPDQISFFQQGTLPCVTKDGKFIMETPFSLAKAPDGNGGVYAALKCSRLLEDM 269
Query: 262 ATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEXXXXXXXXXXXX 321
A+RGIKY+DCYGVDN LVRVADPTFLGYFIDKG ++ AKVVRKAYPQE
Sbjct: 270 ASRGIKYVDCYGVDNVLVRVADPTFLGYFIDKGAASAAKVVRKAYPQEQVGVFVRRGKGG 329
Query: 322 PLTVVEYSELDPSLASAINQETGRLRFCWSNVC 354
PLTVVEYSELD S+ASAINQ TGRL++CWSNVC
Sbjct: 330 PLTVVEYSELDQSMASAINQRTGRLQYCWSNVC 362
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| TAIR|locus:2044787 GlcNAc1pUT2 "N-acetylglucosamine-1-phosphate uridylyltransferase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|G4MYL3 MGG_15671 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-030131-1233 uap1 "UDP-N-acteylglucosamine pyrophosphorylase 1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| FB|FBgn0259749 mmy "mummy" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| ASPGD|ASPL0000037237 ungA [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
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| MGI|MGI:1334459 Uap1 "UDP-N-acetylglucosamine pyrophosphorylase 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| RGD|1561967 Uap1 "UDP-N-acteylglucosamine pyrophosphorylase 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1P7W7 UAP1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1S210 UAP1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.7.7.23 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | fgenesh2_kg.4__1527__AT2G35020.1 | annotation not avaliable (498 aa) | |||||||||
(Arabidopsis lyrata) | |||||||||||
 | Al_scaffold_0006_1722 | • | • | • | 0.559 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 360 | |||
| PLN02435 | 493 | PLN02435, PLN02435, probable UDP-N-acetylglucosami | 0.0 | |
| cd04193 | 323 | cd04193, UDPGlcNAc_PPase, UDPGlcNAc pyrophosphoryl | 1e-137 | |
| PTZ00339 | 482 | PTZ00339, PTZ00339, UDP-N-acetylglucosamine pyroph | 2e-71 | |
| COG4284 | 472 | COG4284, COG4284, UDP-glucose pyrophosphorylase [C | 3e-65 | |
| cd04180 | 266 | cd04180, UGPase_euk_like, Eukaryotic UGPase-like i | 9e-58 | |
| pfam01704 | 417 | pfam01704, UDPGP, UTP--glucose-1-phosphate uridyly | 4e-36 | |
| PLN02830 | 615 | PLN02830, PLN02830, UDP-sugar pyrophosphorylase | 4e-33 | |
| cd06424 | 315 | cd06424, UGGPase, UGGPase catalyzes the synthesis | 1e-25 | |
| cd00897 | 300 | cd00897, UGPase_euk, Eukaryotic UGPase catalyses t | 1e-11 | |
| PLN02474 | 469 | PLN02474, PLN02474, UTP--glucose-1-phosphate uridy | 4e-04 |
| >gnl|CDD|215238 PLN02435, PLN02435, probable UDP-N-acetylglucosamine pyrophosphorylase | Back alignment and domain information |
|---|
Score = 691 bits (1784), Expect = 0.0
Identities = 297/354 (83%), Positives = 325/354 (91%), Gaps = 4/354 (1%)
Query: 1 MREPTVVGTESNGGSVGSIAQSPPPQALLERLKDYGQEDAFALWDELSPDERDHLVKDIE 60
M+EP V E+ + + PPQALLERLKDYGQEDAFALWDELSP+ERD LV+DIE
Sbjct: 1 MKEPVV---ENEAVTAPGPWGAAPPQALLERLKDYGQEDAFALWDELSPEERDLLVRDIE 57
Query: 61 SLDLPRVDRIIRCSLRSQGLPVAAIEPVPERSVSTVEERTMDERERWWKMGLKAISDGKL 120
SLDLPR+DRIIRCSLRSQGLPV AIEPVPE SVSTVEERT ++RERWWKMGLKAIS+GKL
Sbjct: 58 SLDLPRIDRIIRCSLRSQGLPVPAIEPVPENSVSTVEERTPEDRERWWKMGLKAISEGKL 117
Query: 121 AVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSA 180
AV+LLSGGQGTRLGSSDPKGC NIGLPSGKSLFQLQAERILCVQRLAAQ +SEG G
Sbjct: 118 AVVLLSGGQGTRLGSSDPKGCFNIGLPSGKSLFQLQAERILCVQRLAAQASSEGPG-RPV 176
Query: 181 AIHWYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAK 240
IHWYIMTSPFTD+ATRK+FE HKYFGLE+DQVTFFQQGT+PCVSKDG+FIMETP+KVAK
Sbjct: 177 TIHWYIMTSPFTDEATRKFFESHKYFGLEADQVTFFQQGTLPCVSKDGKFIMETPFKVAK 236
Query: 241 APDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAK 300
APDGNGGVY+ALKSS+LLEDMA+RGIKY+DCYGVDNALVRVADPTFLGYFIDKGV++ AK
Sbjct: 237 APDGNGGVYAALKSSRLLEDMASRGIKYVDCYGVDNALVRVADPTFLGYFIDKGVASAAK 296
Query: 301 VVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETGRLRFCWSNVC 354
VVRKAYPQEKVGVFVRRGKGGPLTVVEYSELD ++ASAINQ+TGRLR+CWSNVC
Sbjct: 297 VVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDQAMASAINQQTGRLRYCWSNVC 350
|
Length = 493 |
| >gnl|CDD|133036 cd04193, UDPGlcNAc_PPase, UDPGlcNAc pyrophosphorylase catalayzes the synthesis of UDPGlcNAc | Back alignment and domain information |
|---|
| >gnl|CDD|240368 PTZ00339, PTZ00339, UDP-N-acetylglucosamine pyrophosphorylase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|226734 COG4284, COG4284, UDP-glucose pyrophosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
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| >gnl|CDD|133023 cd04180, UGPase_euk_like, Eukaryotic UGPase-like includes UDPase and UDPGlcNAc pyrophosphorylase enzymes | Back alignment and domain information |
|---|
| >gnl|CDD|201928 pfam01704, UDPGP, UTP--glucose-1-phosphate uridylyltransferase | Back alignment and domain information |
|---|
| >gnl|CDD|215444 PLN02830, PLN02830, UDP-sugar pyrophosphorylase | Back alignment and domain information |
|---|
| >gnl|CDD|133046 cd06424, UGGPase, UGGPase catalyzes the synthesis of UDP-Glucose/UDP-Galactose | Back alignment and domain information |
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| >gnl|CDD|132998 cd00897, UGPase_euk, Eukaryotic UGPase catalyses the synthesis of UDP-Glucose | Back alignment and domain information |
|---|
| >gnl|CDD|178092 PLN02474, PLN02474, UTP--glucose-1-phosphate uridylyltransferase | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 360 | |||
| PLN02435 | 493 | probable UDP-N-acetylglucosamine pyrophosphorylase | 100.0 | |
| PTZ00339 | 482 | UDP-N-acetylglucosamine pyrophosphorylase; Provisi | 100.0 | |
| KOG2388 | 477 | consensus UDP-N-acetylglucosamine pyrophosphorylas | 100.0 | |
| PLN02830 | 615 | UDP-sugar pyrophosphorylase | 100.0 | |
| cd04193 | 323 | UDPGlcNAc_PPase UDPGlcNAc pyrophosphorylase catala | 100.0 | |
| cd06424 | 315 | UGGPase UGGPase catalyzes the synthesis of UDP-Glu | 100.0 | |
| cd00897 | 300 | UGPase_euk Eukaryotic UGPase catalyses the synthes | 100.0 | |
| PF01704 | 420 | UDPGP: UTP--glucose-1-phosphate uridylyltransferas | 100.0 | |
| PLN02474 | 469 | UTP--glucose-1-phosphate uridylyltransferase | 100.0 | |
| COG4284 | 472 | UDP-glucose pyrophosphorylase [Carbohydrate transp | 100.0 | |
| cd04180 | 266 | UGPase_euk_like Eukaryotic UGPase-like includes UD | 100.0 | |
| KOG2638 | 498 | consensus UDP-glucose pyrophosphorylase [Carbohydr | 100.0 | |
| TIGR02092 | 369 | glgD glucose-1-phosphate adenylyltransferase, GlgD | 98.97 | |
| PRK15480 | 292 | glucose-1-phosphate thymidylyltransferase RfbA; Pr | 98.96 | |
| TIGR01207 | 286 | rmlA glucose-1-phosphate thymidylyltransferase, sh | 98.91 | |
| COG1208 | 358 | GCD1 Nucleoside-diphosphate-sugar pyrophosphorylas | 98.89 | |
| PRK05293 | 380 | glgC glucose-1-phosphate adenylyltransferase; Prov | 98.87 | |
| cd04197 | 217 | eIF-2B_epsilon_N The N-terminal domain of epsilon | 98.87 | |
| TIGR01105 | 297 | galF UTP-glucose-1-phosphate uridylyltransferase, | 98.86 | |
| PRK00844 | 407 | glgC glucose-1-phosphate adenylyltransferase; Prov | 98.85 | |
| cd06422 | 221 | NTP_transferase_like_1 NTP_transferase_like_1 is a | 98.73 | |
| cd04189 | 236 | G1P_TT_long G1P_TT_long represents the long form o | 98.69 | |
| PF00483 | 248 | NTP_transferase: Nucleotidyl transferase This Pros | 98.68 | |
| cd02538 | 240 | G1P_TT_short G1P_TT_short is the short form of glu | 98.67 | |
| PRK10122 | 297 | GalU regulator GalF; Provisional | 98.66 | |
| PLN02241 | 436 | glucose-1-phosphate adenylyltransferase | 98.65 | |
| cd06428 | 257 | M1P_guanylylT_A_like_N N-terminal domain of M1P_gu | 98.65 | |
| cd06425 | 233 | M1P_guanylylT_B_like_N N-terminal domain of the M1 | 98.64 | |
| PRK02862 | 429 | glgC glucose-1-phosphate adenylyltransferase; Prov | 98.61 | |
| PRK00725 | 425 | glgC glucose-1-phosphate adenylyltransferase; Prov | 98.61 | |
| cd02540 | 229 | GT2_GlmU_N_bac N-terminal domain of bacterial GlmU | 98.6 | |
| TIGR02623 | 254 | G1P_cyt_trans glucose-1-phosphate cytidylyltransfe | 98.59 | |
| cd04181 | 217 | NTP_transferase NTP_transferases catalyze the tran | 98.56 | |
| COG1209 | 286 | RfbA dTDP-glucose pyrophosphorylase [Cell envelope | 98.56 | |
| PRK14356 | 456 | glmU bifunctional N-acetylglucosamine-1-phosphate | 98.55 | |
| TIGR01208 | 353 | rmlA_long glucose-1-phosphate thymidylylransferase | 98.55 | |
| PRK14358 | 481 | glmU bifunctional N-acetylglucosamine-1-phosphate | 98.53 | |
| KOG1322 | 371 | consensus GDP-mannose pyrophosphorylase/mannose-1- | 98.52 | |
| PRK14359 | 430 | glmU bifunctional N-acetylglucosamine-1-phosphate | 98.52 | |
| COG1207 | 460 | GlmU N-acetylglucosamine-1-phosphate uridyltransfe | 98.51 | |
| cd06426 | 220 | NTP_transferase_like_2 NTP_trnasferase_like_2 is a | 98.51 | |
| cd06915 | 223 | NTP_transferase_WcbM_like WcbM_like is a subfamily | 98.51 | |
| cd02524 | 253 | G1P_cytidylyltransferase G1P_cytidylyltransferase | 98.5 | |
| PRK14352 | 482 | glmU bifunctional N-acetylglucosamine-1-phosphate | 98.47 | |
| cd02508 | 200 | ADP_Glucose_PP ADP-glucose pyrophosphorylase is in | 98.46 | |
| TIGR01099 | 260 | galU UTP-glucose-1-phosphate uridylyltransferase. | 98.42 | |
| PRK14355 | 459 | glmU bifunctional N-acetylglucosamine-1-phosphate | 98.4 | |
| cd02509 | 274 | GDP-M1P_Guanylyltransferase GDP-M1P_Guanylyltransf | 98.39 | |
| PRK14357 | 448 | glmU bifunctional N-acetylglucosamine-1-phosphate | 98.37 | |
| PRK14360 | 450 | glmU bifunctional N-acetylglucosamine-1-phosphate | 98.35 | |
| TIGR02091 | 361 | glgC glucose-1-phosphate adenylyltransferase. This | 98.34 | |
| cd04198 | 214 | eIF-2B_gamma_N The N-terminal domain of gamma subu | 98.3 | |
| cd02523 | 229 | PC_cytidylyltransferase Phosphocholine cytidylyltr | 98.3 | |
| PRK13389 | 302 | UTP--glucose-1-phosphate uridylyltransferase subun | 98.29 | |
| PRK14353 | 446 | glmU bifunctional N-acetylglucosamine-1-phosphate | 98.22 | |
| cd02507 | 216 | eIF-2B_gamma_N_like The N-terminal of eIF-2B_gamma | 98.22 | |
| cd02541 | 267 | UGPase_prokaryotic Prokaryotic UGPase catalyses th | 98.18 | |
| PRK14354 | 458 | glmU bifunctional N-acetylglucosamine-1-phosphate | 98.14 | |
| cd02517 | 239 | CMP-KDO-Synthetase CMP-KDO synthetase catalyzes th | 98.11 | |
| PRK05450 | 245 | 3-deoxy-manno-octulosonate cytidylyltransferase; P | 98.11 | |
| TIGR01173 | 451 | glmU UDP-N-acetylglucosamine diphosphorylase/gluco | 98.09 | |
| PRK09451 | 456 | glmU bifunctional N-acetylglucosamine-1-phosphate | 98.05 | |
| KOG1460 | 407 | consensus GDP-mannose pyrophosphorylase [Carbohydr | 98.0 | |
| TIGR01479 | 468 | GMP_PMI mannose-1-phosphate guanylyltransferase/ma | 97.98 | |
| PF12804 | 160 | NTP_transf_3: MobA-like NTP transferase domain; PD | 97.88 | |
| cd04182 | 186 | GT_2_like_f GT_2_like_f is a subfamily of the glyc | 97.87 | |
| PRK13385 | 230 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltrans | 97.8 | |
| COG1213 | 239 | Predicted sugar nucleotidyltransferases [Cell enve | 97.79 | |
| cd04183 | 231 | GT2_BcE_like GT2_BcbE_like is likely involved in t | 97.79 | |
| PLN02917 | 293 | CMP-KDO synthetase | 97.65 | |
| TIGR00454 | 183 | conserved hypothetical protein TIGR00454. At this | 97.6 | |
| PF01128 | 221 | IspD: 2-C-methyl-D-erythritol 4-phosphate cytidyly | 97.56 | |
| COG0746 | 192 | MobA Molybdopterin-guanine dinucleotide biosynthes | 97.51 | |
| COG0448 | 393 | GlgC ADP-glucose pyrophosphorylase [Carbohydrate t | 97.5 | |
| cd02516 | 218 | CDP-ME_synthetase CDP-ME synthetase is involved in | 97.5 | |
| cd02513 | 223 | CMP-NeuAc_Synthase CMP-NeuAc_Synthase activates N- | 97.49 | |
| PRK13368 | 238 | 3-deoxy-manno-octulosonate cytidylyltransferase; P | 97.48 | |
| PLN02728 | 252 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltrans | 97.37 | |
| PRK14489 | 366 | putative bifunctional molybdopterin-guanine dinucl | 97.29 | |
| cd02503 | 181 | MobA MobA catalyzes the formation of molybdopterin | 97.28 | |
| PRK09382 | 378 | ispDF bifunctional 2-C-methyl-D-erythritol 4-phosp | 97.26 | |
| TIGR03202 | 190 | pucB xanthine dehydrogenase accessory protein pucB | 97.2 | |
| COG2266 | 177 | GTP:adenosylcobinamide-phosphate guanylyltransfera | 97.11 | |
| PRK00560 | 196 | molybdopterin-guanine dinucleotide biosynthesis pr | 97.06 | |
| TIGR00453 | 217 | ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyl | 97.05 | |
| TIGR03310 | 188 | matur_ygfJ molybdenum hydroxylase accessory protei | 96.98 | |
| TIGR00466 | 238 | kdsB 3-deoxy-D-manno-octulosonate cytidylyltransfe | 96.92 | |
| PRK00155 | 227 | ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyl | 96.85 | |
| PRK00317 | 193 | mobA molybdopterin-guanine dinucleotide biosynthes | 96.79 | |
| cd02518 | 233 | GT2_SpsF SpsF is a glycosyltrnasferase implicated | 96.78 | |
| TIGR02665 | 186 | molyb_mobA molybdopterin-guanine dinucleotide bios | 96.74 | |
| PRK02726 | 200 | molybdopterin-guanine dinucleotide biosynthesis pr | 96.72 | |
| COG1211 | 230 | IspD 4-diphosphocytidyl-2-methyl-D-erithritol synt | 96.63 | |
| PRK14500 | 346 | putative bifunctional molybdopterin-guanine dinucl | 96.55 | |
| PRK14490 | 369 | putative bifunctional molybdopterin-guanine dinucl | 96.52 | |
| COG0836 | 333 | {ManC} Mannose-1-phosphate guanylyltransferase [Ce | 96.49 | |
| PRK15460 | 478 | cpsB mannose-1-phosphate guanyltransferase; Provis | 96.05 | |
| COG4750 | 231 | LicC CTP:phosphocholine cytidylyltransferase invol | 95.02 | |
| COG1210 | 291 | GalU UDP-glucose pyrophosphorylase [Cell envelope | 94.64 | |
| TIGR03584 | 222 | PseF pseudaminic acid CMP-transferase. The sequenc | 94.21 | |
| COG2068 | 199 | Uncharacterized MobA-related protein [General func | 91.09 | |
| PF14134 | 513 | DUF4301: Domain of unknown function (DUF4301) | 85.91 | |
| COG1212 | 247 | KdsB CMP-2-keto-3-deoxyoctulosonic acid synthetase | 82.25 |
| >PLN02435 probable UDP-N-acetylglucosamine pyrophosphorylase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-95 Score=735.57 Aligned_cols=356 Identities=84% Similarity=1.338 Sum_probs=328.1
Q ss_pred CCCCceeeeccCCCCCCCCCCCCCHHHHHHHHHHCCCchhccccccCCHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCC
Q 018126 1 MREPTVVGTESNGGSVGSIAQSPPPQALLERLKDYGQEDAFALWDELSPDERDHLVKDIESLDLPRVDRIIRCSLRSQGL 80 (360)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gQ~Hl~~~~~~l~~~ek~~L~~ql~~iD~~~~~~~~~~~~~~~~~ 80 (360)
|.||.|-. | .+...+-|+. ...++|+++|.++||+|||++|++|+++||++|++||+++|++++.+++++++.+.+.
T Consensus 1 ~~~~~~~~-~-~~~~~~~~~~-~~~~~l~~~l~~~gQ~HLl~~w~~ls~~e~~~L~~qL~~iD~~~l~~~~~~~~~~~~~ 77 (493)
T PLN02435 1 MKEPVVEN-E-AVTAPGPWGA-APPQALLERLKDYGQEDAFALWDELSPEERDLLVRDIESLDLPRIDRIIRCSLRSQGL 77 (493)
T ss_pred CCcccccc-c-cCCCCCCCCc-ccHHHHHHHHHHcChHHHHHhhhhCCHHHHHHHHHHHHhcCHHHHHHHHHHHhhccCC
Confidence 78886643 2 3445577875 4567899999999999999999999999999999999999999999999888765556
Q ss_pred CCCCcccCCCCCccccccCChHHHHHHHHHhhhhhcCCCEEEEEecCCCccccCCCCCCCceeecCCCCCccHHHHHHHH
Q 018126 81 PVAAIEPVPERSVSTVEERTMDERERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERI 160 (360)
Q Consensus 81 ~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~G~~~i~~gkvavvlLAGG~GTRLg~~~pKg~~~i~l~s~ksllql~~e~i 160 (360)
+++.++|+|++.+.++++.+.+..++|+++|+++|++||||||+||||||||||+++||||+||++|++|||||+++|||
T Consensus 78 ~~~~i~P~p~~~~~~~~~~~~~~~~~~~~~Gl~~I~~gkvavvlLAGGqGTRLG~~~PKg~~~Iglps~kslfql~~e~I 157 (493)
T PLN02435 78 PVPAIEPVPENSVSTVEERTPEDRERWWKMGLKAISEGKLAVVLLSGGQGTRLGSSDPKGCFNIGLPSGKSLFQLQAERI 157 (493)
T ss_pred chhccCCCChhhccchhccChHHHHHHHHHHHHHHhcCCEEEEEeCCCcccccCCCCCccceecCCCCCCcHHHHHHHHH
Confidence 78889999988888888776677788999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcCCCCCCCCceeEEEecCCcchHHHHHHHhhcCCCCCCCCcEEEEEcCceeeeecCCcccccCCCcccc
Q 018126 161 LCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAK 240 (360)
Q Consensus 161 ~~lq~la~~~~~~~~~~~~~~ipl~IMTS~~t~~~t~~~f~~~~~FGl~~~~v~~f~Q~~~P~~~~~gki~l~~~~~i~~ 240 (360)
+++|+++.++.+. +.+++++||||||||+.||++|++||++|+|||+++++|+||+|+++||++.+|+++|++|++++|
T Consensus 158 ~~lq~la~~~~~~-~~~~~~~IPl~IMTS~~T~~~T~~ff~~~~~FGl~~~~V~fF~Q~~~P~~~~dg~i~l~~~~~i~~ 236 (493)
T PLN02435 158 LCVQRLAAQASSE-GPGRPVTIHWYIMTSPFTDEATRKFFESHKYFGLEADQVTFFQQGTLPCVSKDGKFIMETPFKVAK 236 (493)
T ss_pred HHHHHHHHhhccc-ccCCCCceeEEEeCCcchhHHHHHHHHhCCCCCCCccceEEEecCCcceECCCCCcccCCCccccc
Confidence 9999999776532 112578899999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCChhHhHHHhhCcHHHHHHHCCCeEEEEEcCCCccccccCHHHHHHHHHcCCceEEEEeecCCCCcccceEEEEccC
Q 018126 241 APDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKG 320 (360)
Q Consensus 241 ~P~GhGgi~~aL~~sg~l~~l~~~Gi~yi~v~~vDN~L~~~~DP~flG~~~~~~~~~~~kvv~K~~p~E~vGvi~~~~~~ 320 (360)
+|+||||+|.+|.++|+|++|+++|++|+||+||||+|++++||.|||||+.++++|++||++|++|+|+||+||+.+.+
T Consensus 237 ~P~GnGgiy~aL~~sG~Ld~l~~~Gi~yi~v~~vDN~L~~~~DP~flG~~~~~~~d~~~kVv~K~~~~EkvG~i~~~~~~ 316 (493)
T PLN02435 237 APDGNGGVYAALKSSRLLEDMASRGIKYVDCYGVDNALVRVADPTFLGYFIDKGVASAAKVVRKAYPQEKVGVFVRRGKG 316 (493)
T ss_pred CCCCCcHHHHHHHHCCcHHHHHhcCCEEEEEEecccccccccCHHHHHHHHhcCCceEEEeeecCCCCCceeEEEEecCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999997668
Q ss_pred CCeEEEEecCCChHHHhhcccCCCceeeeccceeeeeecC
Q 018126 321 GPLTVVEYSELDPSLASAINQETGRLRFCWSNVCTFASTS 360 (360)
Q Consensus 321 g~~~vvEYsel~~~~~~~~~~~~g~l~f~~gni~~h~f~~ 360 (360)
|+++|||||||++++++++++++|+|+|++||||||+||.
T Consensus 317 g~~~vvEYsEl~~~~~~~~~~~~g~L~~~~gnI~~h~fs~ 356 (493)
T PLN02435 317 GPLTVVEYSELDQAMASAINQQTGRLRYCWSNVCLHMFTL 356 (493)
T ss_pred CCEEEEEeccCCHHHHhccCccccccccchhhHHHhhccH
Confidence 9999999999999999988876799999999999999983
|
|
| >PTZ00339 UDP-N-acetylglucosamine pyrophosphorylase; Provisional | Back alignment and domain information |
|---|
| >KOG2388 consensus UDP-N-acetylglucosamine pyrophosphorylase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
| >PLN02830 UDP-sugar pyrophosphorylase | Back alignment and domain information |
|---|
| >cd04193 UDPGlcNAc_PPase UDPGlcNAc pyrophosphorylase catalayzes the synthesis of UDPGlcNAc | Back alignment and domain information |
|---|
| >cd06424 UGGPase UGGPase catalyzes the synthesis of UDP-Glucose/UDP-Galactose | Back alignment and domain information |
|---|
| >cd00897 UGPase_euk Eukaryotic UGPase catalyses the synthesis of UDP-Glucose | Back alignment and domain information |
|---|
| >PF01704 UDPGP: UTP--glucose-1-phosphate uridylyltransferase; InterPro: IPR002618 This family consists of UTP--glucose-1-phosphate uridylyltransferases (2 | Back alignment and domain information |
|---|
| >PLN02474 UTP--glucose-1-phosphate uridylyltransferase | Back alignment and domain information |
|---|
| >COG4284 UDP-glucose pyrophosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >cd04180 UGPase_euk_like Eukaryotic UGPase-like includes UDPase and UDPGlcNAc pyrophosphorylase enzymes | Back alignment and domain information |
|---|
| >KOG2638 consensus UDP-glucose pyrophosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR02092 glgD glucose-1-phosphate adenylyltransferase, GlgD subunit | Back alignment and domain information |
|---|
| >PRK15480 glucose-1-phosphate thymidylyltransferase RfbA; Provisional | Back alignment and domain information |
|---|
| >TIGR01207 rmlA glucose-1-phosphate thymidylyltransferase, short form | Back alignment and domain information |
|---|
| >COG1208 GCD1 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) [Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >PRK05293 glgC glucose-1-phosphate adenylyltransferase; Provisional | Back alignment and domain information |
|---|
| >cd04197 eIF-2B_epsilon_N The N-terminal domain of epsilon subunit of the eIF-2B is a subfamily of glycosyltransferase 2 | Back alignment and domain information |
|---|
| >TIGR01105 galF UTP-glucose-1-phosphate uridylyltransferase, non-catalytic GalF subunit | Back alignment and domain information |
|---|
| >PRK00844 glgC glucose-1-phosphate adenylyltransferase; Provisional | Back alignment and domain information |
|---|
| >cd06422 NTP_transferase_like_1 NTP_transferase_like_1 is a member of the nucleotidyl transferase family | Back alignment and domain information |
|---|
| >cd04189 G1P_TT_long G1P_TT_long represents the long form of glucose-1-phosphate thymidylyltransferase | Back alignment and domain information |
|---|
| >PF00483 NTP_transferase: Nucleotidyl transferase This Prosite entry is only a sub-family of the Pfam entry | Back alignment and domain information |
|---|
| >cd02538 G1P_TT_short G1P_TT_short is the short form of glucose-1-phosphate thymidylyltransferase | Back alignment and domain information |
|---|
| >PRK10122 GalU regulator GalF; Provisional | Back alignment and domain information |
|---|
| >PLN02241 glucose-1-phosphate adenylyltransferase | Back alignment and domain information |
|---|
| >cd06428 M1P_guanylylT_A_like_N N-terminal domain of M1P_guanylyl_A_ like proteins are likely to be a isoform of GDP-mannose pyrophosphorylase | Back alignment and domain information |
|---|
| >cd06425 M1P_guanylylT_B_like_N N-terminal domain of the M1P-guanylyltransferase B-isoform like proteins | Back alignment and domain information |
|---|
| >PRK02862 glgC glucose-1-phosphate adenylyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK00725 glgC glucose-1-phosphate adenylyltransferase; Provisional | Back alignment and domain information |
|---|
| >cd02540 GT2_GlmU_N_bac N-terminal domain of bacterial GlmU | Back alignment and domain information |
|---|
| >TIGR02623 G1P_cyt_trans glucose-1-phosphate cytidylyltransferase | Back alignment and domain information |
|---|
| >cd04181 NTP_transferase NTP_transferases catalyze the transfer of nucleotides onto phosphosugars | Back alignment and domain information |
|---|
| >COG1209 RfbA dTDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >PRK14356 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >TIGR01208 rmlA_long glucose-1-phosphate thymidylylransferase, long form | Back alignment and domain information |
|---|
| >PRK14358 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >KOG1322 consensus GDP-mannose pyrophosphorylase/mannose-1-phosphate guanylyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
| >PRK14359 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >COG1207 GlmU N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >cd06426 NTP_transferase_like_2 NTP_trnasferase_like_2 is a member of the nucleotidyl transferase family | Back alignment and domain information |
|---|
| >cd06915 NTP_transferase_WcbM_like WcbM_like is a subfamily of nucleotidyl transferases | Back alignment and domain information |
|---|
| >cd02524 G1P_cytidylyltransferase G1P_cytidylyltransferase catalyzes the production of CDP-D-Glucose | Back alignment and domain information |
|---|
| >PRK14352 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >cd02508 ADP_Glucose_PP ADP-glucose pyrophosphorylase is involved in the biosynthesis of glycogen or starch | Back alignment and domain information |
|---|
| >TIGR01099 galU UTP-glucose-1-phosphate uridylyltransferase | Back alignment and domain information |
|---|
| >PRK14355 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >cd02509 GDP-M1P_Guanylyltransferase GDP-M1P_Guanylyltransferase catalyzes the formation of GDP-Mannose | Back alignment and domain information |
|---|
| >PRK14357 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK14360 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >TIGR02091 glgC glucose-1-phosphate adenylyltransferase | Back alignment and domain information |
|---|
| >cd04198 eIF-2B_gamma_N The N-terminal domain of gamma subunit of the eIF-2B is a subfamily of glycosyltransferase 2 | Back alignment and domain information |
|---|
| >cd02523 PC_cytidylyltransferase Phosphocholine cytidylyltransferases catalyze the synthesis of CDP-choline | Back alignment and domain information |
|---|
| >PRK13389 UTP--glucose-1-phosphate uridylyltransferase subunit GalU; Provisional | Back alignment and domain information |
|---|
| >PRK14353 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >cd02507 eIF-2B_gamma_N_like The N-terminal of eIF-2B_gamma_like is predicted to have glycosyltransferase activity | Back alignment and domain information |
|---|
| >cd02541 UGPase_prokaryotic Prokaryotic UGPase catalyses the synthesis of UDP-glucose | Back alignment and domain information |
|---|
| >PRK14354 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >cd02517 CMP-KDO-Synthetase CMP-KDO synthetase catalyzes the activation of KDO which is an essential component of the lipopolysaccharide | Back alignment and domain information |
|---|
| >PRK05450 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional | Back alignment and domain information |
|---|
| >TIGR01173 glmU UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase | Back alignment and domain information |
|---|
| >PRK09451 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >KOG1460 consensus GDP-mannose pyrophosphorylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >TIGR01479 GMP_PMI mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | Back alignment and domain information |
|---|
| >PF12804 NTP_transf_3: MobA-like NTP transferase domain; PDB: 3FWW_A 2XME_D 2XMH_C 2DPW_A 2WAW_A 2OI5_B 1HV9_B 1FWY_A 2OI6_A 2OI7_B | Back alignment and domain information |
|---|
| >cd04182 GT_2_like_f GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function | Back alignment and domain information |
|---|
| >PRK13385 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Provisional | Back alignment and domain information |
|---|
| >COG1213 Predicted sugar nucleotidyltransferases [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >cd04183 GT2_BcE_like GT2_BcbE_like is likely involved in the biosynthesis of the polysaccharide capsule | Back alignment and domain information |
|---|
| >PLN02917 CMP-KDO synthetase | Back alignment and domain information |
|---|
| >TIGR00454 conserved hypothetical protein TIGR00454 | Back alignment and domain information |
|---|
| >PF01128 IspD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; InterPro: IPR001228 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, a bacterial ispD protein, catalyzes the third step of the deoxyxylulose-5-phosphate pathway (DXP) of isoprenoid biosynthesis; the formation of 4-diphosphocytidyl-2C-methyl-D-erythritol from CTP and 2C-methyl-D-erythritol 4-phosphate [] | Back alignment and domain information |
|---|
| >COG0746 MobA Molybdopterin-guanine dinucleotide biosynthesis protein A [Coenzyme metabolism] | Back alignment and domain information |
|---|
| >COG0448 GlgC ADP-glucose pyrophosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >cd02516 CDP-ME_synthetase CDP-ME synthetase is involved in mevalonate-independent isoprenoid production | Back alignment and domain information |
|---|
| >cd02513 CMP-NeuAc_Synthase CMP-NeuAc_Synthase activates N-acetylneuraminic acid by adding CMP moiety | Back alignment and domain information |
|---|
| >PRK13368 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional | Back alignment and domain information |
|---|
| >PLN02728 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | Back alignment and domain information |
|---|
| >PRK14489 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobA/MobB; Provisional | Back alignment and domain information |
|---|
| >cd02503 MobA MobA catalyzes the formation of molybdopterin guanine dinucleotide | Back alignment and domain information |
|---|
| >PRK09382 ispDF bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein; Provisional | Back alignment and domain information |
|---|
| >TIGR03202 pucB xanthine dehydrogenase accessory protein pucB | Back alignment and domain information |
|---|
| >COG2266 GTP:adenosylcobinamide-phosphate guanylyltransferase [Coenzyme metabolism] | Back alignment and domain information |
|---|
| >PRK00560 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional | Back alignment and domain information |
|---|
| >TIGR00453 ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | Back alignment and domain information |
|---|
| >TIGR03310 matur_ygfJ molybdenum hydroxylase accessory protein, YgfJ family | Back alignment and domain information |
|---|
| >TIGR00466 kdsB 3-deoxy-D-manno-octulosonate cytidylyltransferase | Back alignment and domain information |
|---|
| >PRK00155 ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Reviewed | Back alignment and domain information |
|---|
| >PRK00317 mobA molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed | Back alignment and domain information |
|---|
| >cd02518 GT2_SpsF SpsF is a glycosyltrnasferase implicated in the synthesis of the spore coat | Back alignment and domain information |
|---|
| >TIGR02665 molyb_mobA molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial | Back alignment and domain information |
|---|
| >PRK02726 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional | Back alignment and domain information |
|---|
| >COG1211 IspD 4-diphosphocytidyl-2-methyl-D-erithritol synthase [Lipid metabolism] | Back alignment and domain information |
|---|
| >PRK14500 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MoaC/MobA; Provisional | Back alignment and domain information |
|---|
| >PRK14490 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MobA; Provisional | Back alignment and domain information |
|---|
| >COG0836 {ManC} Mannose-1-phosphate guanylyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >PRK15460 cpsB mannose-1-phosphate guanyltransferase; Provisional | Back alignment and domain information |
|---|
| >COG4750 LicC CTP:phosphocholine cytidylyltransferase involved in choline phosphorylation for cell surface LPS epitopes [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >COG1210 GalU UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >TIGR03584 PseF pseudaminic acid CMP-transferase | Back alignment and domain information |
|---|
| >COG2068 Uncharacterized MobA-related protein [General function prediction only] | Back alignment and domain information |
|---|
| >PF14134 DUF4301: Domain of unknown function (DUF4301) | Back alignment and domain information |
|---|
| >COG1212 KdsB CMP-2-keto-3-deoxyoctulosonic acid synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 360 | ||||
| 1vm8_A | 534 | Crystal Structure Of Udp-N-Acetylglucosamine Pyroph | 2e-65 | ||
| 1jvd_A | 522 | Crystal Structure Of Human Agx2 Complexed With Udpg | 1e-64 | ||
| 1jv1_A | 505 | Crystal Structure Of Human Agx1 Complexed With Udpg | 2e-64 | ||
| 2yqc_A | 486 | Crystal Structure Of Uridine-Diphospho-N-Acetylgluc | 1e-63 | ||
| 3oc9_A | 405 | Crystal Structure Of Putative Udp-N-Acetylglucosami | 4e-39 | ||
| 3r2w_A | 528 | Crystal Strucutre Of Udp-Glucose Pyrophosphorylase | 5e-05 | ||
| 2i5k_A | 488 | Crystal Structure Of Ugp1p Length = 488 | 1e-04 | ||
| 3gue_A | 484 | Crystal Structure Of Udp-Glucose Phosphorylase From | 2e-04 |
| >pdb|1VM8|A Chain A, Crystal Structure Of Udp-N-Acetylglucosamine Pyrophosphorylase (Agx2) From Mus Musculus At 2.50 A Resolution Length = 534 | Back alignment and structure |
|
| >pdb|1JVD|A Chain A, Crystal Structure Of Human Agx2 Complexed With Udpglcnac Length = 522 | Back alignment and structure |
| >pdb|1JV1|A Chain A, Crystal Structure Of Human Agx1 Complexed With Udpglcnac Length = 505 | Back alignment and structure |
| >pdb|2YQC|A Chain A, Crystal Structure Of Uridine-Diphospho-N-Acetylglucosamine Pyrophosphorylase From Candida Albicans, In The Apo-Like Form Length = 486 | Back alignment and structure |
| >pdb|3OC9|A Chain A, Crystal Structure Of Putative Udp-N-Acetylglucosamine Pyrophosphorylase From Entamoeba Histolytica Length = 405 | Back alignment and structure |
| >pdb|3R2W|A Chain A, Crystal Strucutre Of Udp-Glucose Pyrophosphorylase Of Homo Sapiens Length = 528 | Back alignment and structure |
| >pdb|2I5K|A Chain A, Crystal Structure Of Ugp1p Length = 488 | Back alignment and structure |
| >pdb|3GUE|A Chain A, Crystal Structure Of Udp-Glucose Phosphorylase From Trypanosoma Brucei, (Tb10.389.0330) Length = 484 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2yqc_A UDP-N-acetylglucosamine pyrophosphorylase; uridine-diphospho-N- acetylglucosamine, N-acetylglucosamine-1-phosphate, transferase; 1.90A {Candida albicans} PDB: 2yqh_A* 2yqj_A* 2yqs_A* Length = 486 | Back alignment and structure |
|---|
Score = 333 bits (855), Expect = e-112
Identities = 132/341 (38%), Positives = 200/341 (58%), Gaps = 12/341 (3%)
Query: 23 PPPQALLERLKDYGQEDAFALWDELSPDERDHLVKDIESLDLP-----RVDRIIRCSLRS 77
Q +++ K Q+ F +D L+ D++ + + +++ P V++ I+ S +
Sbjct: 4 KSQQQIIDSFKQANQDQLFQYYDSLTIDQQQEFIDQLSTIEEPAKLISTVEQAIQFSQTN 63
Query: 78 QGLPVAAIEPVPERSVSTVEERTMDERERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSD 137
+P ++ + + D + W ++GLKAI +G++AVLL++GGQGTRLGSS
Sbjct: 64 S--TSRNFTQLPNEQTASTLDLSKDILQNWTELGLKAIGNGEVAVLLMAGGQGTRLGSSA 121
Query: 138 PKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATR 197
PKGC NI LPS KSLFQ+QAE+IL +++LA Q I+WYIMTS T +AT
Sbjct: 122 PKGCFNIELPSQKSLFQIQAEKILKIEQLAQQYLKSTKKPI---INWYIMTSGPTRNATE 178
Query: 198 KYFEGHKYFGLESDQVTFFQQGTIPCVSKDG-RFIMETPYKVAKAPDGNGGVYSALKSSK 256
+F + YFGL S QV FF QGT+PC + G + ++E + ++PDGNGG+Y ALK +
Sbjct: 179 SFFIENNYFGLNSHQVIFFNQGTLPCFNLQGNKILLELKNSICQSPDGNGGLYKALKDNG 238
Query: 257 LLEDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVR 316
+L+D+ ++GIK+I Y VDN LV+VADP F+G+ I K KVVRK E VG+ V
Sbjct: 239 ILDDLNSKGIKHIHMYCVDNCLVKVADPIFIGFAIAKKFDLATKVVRKRDANESVGLIVL 298
Query: 317 RGKGGPLTVVEYSELDPSLASAIN-QETGRLRFCWSNVCTF 356
V+EYSE+ LA+ + Q++ +L +N+
Sbjct: 299 DQDNQKPCVIEYSEISQELANKKDPQDSSKLFLRAANIVNH 339
|
| >1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A* Length = 505 | Back alignment and structure |
|---|
| >3oc9_A UDP-N-acetylglucosamine pyrophosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.80A {Entamoeba histolytica} Length = 405 | Back alignment and structure |
|---|
| >3r3i_A UTP--glucose-1-phosphate uridylyltransferase; rossmann fold, beta barrel, nucleotidyltransferase; 3.57A {Homo sapiens} PDB: 3r2w_A Length = 528 | Back alignment and structure |
|---|
| >3gue_A UTP-glucose-1-phosphate uridylyltransferase 2; phosphatase, UDP, structural GE structural genomics consortium, SGC; HET: UPG PG4; 1.92A {Trypanosoma brucei} Length = 484 | Back alignment and structure |
|---|
| >2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae} Length = 488 | Back alignment and structure |
|---|
| >3ogz_A UDP-sugar pyrophosphorylase; LEFT handed beta helix, rossmann fold, UDP sugar pyrophospho transferase; 2.03A {Leishmania major} PDB: 3oh3_A* 3oh1_A* 3oh0_A* 3oh2_A* 3oh4_A* Length = 630 | Back alignment and structure |
|---|
| >2oeg_A UTP-glucose-1-phosphate uridylyltransferase 2, putative; rossmann-fold, beta-helix, pyrophosphorylase; HET: UPG; 2.30A {Leishmania major} PDB: 2oef_A* Length = 505 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 360 | |||
| 2yqc_A | 486 | UDP-N-acetylglucosamine pyrophosphorylase; uridine | 100.0 | |
| 1jv1_A | 505 | Glcnac1P uridyltransferase isoform 1: AGX1; nucleo | 100.0 | |
| 3ogz_A | 630 | UDP-sugar pyrophosphorylase; LEFT handed beta heli | 100.0 | |
| 3oc9_A | 405 | UDP-N-acetylglucosamine pyrophosphorylase; structu | 100.0 | |
| 3r3i_A | 528 | UTP--glucose-1-phosphate uridylyltransferase; ross | 100.0 | |
| 3gue_A | 484 | UTP-glucose-1-phosphate uridylyltransferase 2; pho | 100.0 | |
| 2oeg_A | 505 | UTP-glucose-1-phosphate uridylyltransferase 2, put | 100.0 | |
| 2icy_A | 469 | Probable UTP-glucose-1-phosphate uridylyltransfera | 100.0 | |
| 2i5k_A | 488 | UTP--glucose-1-phosphate uridylyltransferase; LEFT | 100.0 | |
| 3st8_A | 501 | Bifunctional protein GLMU; acetyltransferase, pyro | 99.17 | |
| 4ecm_A | 269 | Glucose-1-phosphate thymidylyltransferase; HET: DA | 98.8 | |
| 3oam_A | 252 | 3-deoxy-manno-octulosonate cytidylyltransferase; c | 98.68 | |
| 1fxo_A | 293 | Glucose-1-phosphate thymidylyltransferase; rhamnos | 98.68 | |
| 1lvw_A | 295 | Glucose-1-phosphate thymidylyltransferase; protein | 98.58 | |
| 1mc3_A | 296 | Glucose-1-phosphate thymidylyltransferase; glucose | 98.57 | |
| 3juk_A | 281 | UDP-glucose pyrophosphorylase (GALU); transfer; HE | 98.55 | |
| 3pnn_A | 303 | Conserved domain protein; structural genomics, PSI | 98.51 | |
| 3brk_X | 420 | Glucose-1-phosphate adenylyltransferase; ADP-gluco | 98.5 | |
| 2qh5_A | 308 | PMI, ALGA, mannose-6-phosphate isomerase; structur | 98.47 | |
| 1yp2_A | 451 | Glucose-1-phosphate adenylyltransferase small subu | 98.45 | |
| 4evw_A | 255 | Nucleoside-diphosphate-sugar pyrophosphorylase; st | 98.34 | |
| 1tzf_A | 259 | Glucose-1-phosphate cytidylyltransferase; nucleoti | 98.31 | |
| 3k8d_A | 264 | 3-deoxy-manno-octulosonate cytidylyltransferase; K | 98.23 | |
| 2v0h_A | 456 | Bifunctional protein GLMU; cell WALL, magnesium, c | 98.23 | |
| 1hm9_A | 468 | GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltr | 98.2 | |
| 3tqd_A | 256 | 3-deoxy-manno-octulosonate cytidylyltransferase; c | 98.2 | |
| 4fce_A | 459 | Bifunctional protein GLMU; GLMU. csgid, niaid, str | 98.19 | |
| 2y6p_A | 234 | 3-deoxy-manno-octulosonate cytidylyltransferase; l | 98.15 | |
| 2e3d_A | 302 | UTP--glucose-1-phosphate uridylyltransferase; UDP- | 98.15 | |
| 1ezi_A | 228 | CMP-N-acetylneuraminic acid synthetase; homodimer, | 98.12 | |
| 2ux8_A | 297 | Glucose-1-phosphate uridylyltransferase; UGPG, GAL | 98.11 | |
| 3f1c_A | 246 | Putative 2-C-methyl-D-erythritol 4-phosphate cytid | 98.09 | |
| 2pa4_A | 323 | UTP-glucose-1-phosphate uridylyltransferase; phosp | 98.08 | |
| 1h7e_A | 245 | 3-deoxy-manno-octulosonate cytidylyltransferase; n | 98.07 | |
| 1qwj_A | 229 | Cytidine monophospho-N-acetylneuraminic acid synth | 98.02 | |
| 2waw_A | 199 | MOBA relate protein; unknown function; HET: PGE; 1 | 98.01 | |
| 2x65_A | 336 | Mannose-1-phosphate guanylyltransferase; nucleotid | 97.96 | |
| 2xwl_A | 223 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; | 97.96 | |
| 3q80_A | 231 | 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; | 97.9 | |
| 1vic_A | 262 | 3-deoxy-manno-octulosonate cytidylyltransferase; s | 97.89 | |
| 1vpa_A | 234 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; | 97.88 | |
| 1vgw_A | 231 | 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; | 97.88 | |
| 2vsh_A | 236 | TARI, 2-C-methyl-D-erythritol 4-phosphate cytidyly | 97.86 | |
| 1i52_A | 236 | 4-diphosphocytidyl-2-C-methylerythritol synthase; | 97.84 | |
| 2wee_A | 197 | MOBA-related protein; unknown function; 1.65A {Myc | 97.82 | |
| 2cu2_A | 337 | Putative mannose-1-phosphate guanylyl transferase; | 97.72 | |
| 2yc3_A | 228 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltran | 97.61 | |
| 4fcu_A | 253 | 3-deoxy-manno-octulosonate cytidylyltransferase; s | 97.59 | |
| 3ngw_A | 208 | Molybdopterin-guanine dinucleotide biosynthesis P | 97.57 | |
| 2ggo_A | 401 | 401AA long hypothetical glucose-1-phosphate thymid | 97.51 | |
| 3rsb_A | 196 | Adenosylcobinamide-phosphate guanylyltransferase; | 97.46 | |
| 1w55_A | 371 | ISPD/ISPF bifunctional enzyme; biosynthetic pathwa | 97.25 | |
| 1jyk_A | 254 | LICC protein, CTP:phosphocholine cytidylytransfera | 97.22 | |
| 2px7_A | 236 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltrans | 97.2 | |
| 3d5n_A | 197 | Q97W15_sulso; NESG, SSR125, structural genomics, P | 97.2 | |
| 1e5k_A | 201 | Molybdopterin-guanine dinucleotide biosynthesis pr | 97.19 | |
| 2xme_A | 232 | CTP-inositol-1-phosphate cytidylyltransferase; CDP | 97.18 | |
| 2e8b_A | 201 | Probable molybdopterin-guanine dinucleotide biosy | 96.67 | |
| 2dpw_A | 232 | Hypothetical protein TTHA0179; transferase, struct | 95.91 |
| >2yqc_A UDP-N-acetylglucosamine pyrophosphorylase; uridine-diphospho-N- acetylglucosamine, N-acetylglucosamine-1-phosphate, transferase; 1.90A {Candida albicans} PDB: 2yqh_A* 2yqj_A* 2yqs_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-79 Score=625.50 Aligned_cols=334 Identities=38% Similarity=0.675 Sum_probs=308.3
Q ss_pred CCCHHHHHHHHHHCCCchhccccccCCHHHHHHHHHHHhcC-ChHHHHHHHHHHHhcCCC-CC-CCcccCCCCCcccccc
Q 018126 22 SPPPQALLERLKDYGQEDAFALWDELSPDERDHLVKDIESL-DLPRVDRIIRCSLRSQGL-PV-AAIEPVPERSVSTVEE 98 (360)
Q Consensus 22 ~~~~~~l~~~l~~~gQ~Hl~~~~~~l~~~ek~~L~~ql~~i-D~~~~~~~~~~~~~~~~~-~~-~~~~p~p~~~~~~~~~ 98 (360)
++.+.+++++|+++||+|||++|++|+++||++|++||+++ |++.+.++++++...+.. .+ ..++|+|++.+.++.+
T Consensus 3 ~~~~~~l~~~l~~~gQ~hl~~~~~~l~~~ek~~l~~ql~~~~d~~~l~~~~~~~~~~~~~~~~~~~i~p~p~~~~~~~~~ 82 (486)
T 2yqc_A 3 VKSQQQIIDSFKQANQDQLFQYYDSLTIDQQQEFIDQLSTIEEPAKLISTVEQAIQFSQTNSTSRNFTQLPNEQTASTLD 82 (486)
T ss_dssp CCCHHHHHHHHHHTTCGGGGTTGGGSCHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHTC----CCCEECCCGGGEEETTT
T ss_pred hhhHHHHHHHHHHcCcHHHhhhhccCCHHHHHHHHHHHHhCcCHHHHHHHHHHHHhccccccccccccCCChhhcccccc
Confidence 46678999999999999999999999999999999999999 999999999988754322 22 2489999988888877
Q ss_pred CChHHHHHHHHHhhhhhcCCCEEEEEecCCCccccCCCCCCCceeecCCCCCccHHHHHHHHHHHHHHHHhhhcCCCCCC
Q 018126 99 RTMDERERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSG 178 (360)
Q Consensus 99 ~~~~~~~~~~~~G~~~i~~gkvavvlLAGG~GTRLg~~~pKg~~~i~l~s~ksllql~~e~i~~lq~la~~~~~~~~~~~ 178 (360)
.+.++.++|++.|+++|++||+|+|+||||+|||||++.||||+||++|++|||||+++++|+++++++.+.++. ..
T Consensus 83 ~~~~~~~~~~~~G~~~i~~gkvavvlLaGG~GTRLg~~~PK~l~~v~l~~gk~~l~~~~e~l~~~~~~~~~~~G~---~~ 159 (486)
T 2yqc_A 83 LSKDILQNWTELGLKAIGNGEVAVLLMAGGQGTRLGSSAPKGCFNIELPSQKSLFQIQAEKILKIEQLAQQYLKS---TK 159 (486)
T ss_dssp SCHHHHHHHHHHHHHHHHTTCEEEEEEEESBCGGGTCSSBGGGCBCCCTTCCBHHHHHHHHHHHHHHHHHHHHTC---SS
T ss_pred CChHHHHHHHHHHHHHHhhCCeEEEEEcCCccccCCCCCCCccceecCCCCCcHHHHHHHHHHHHHHHhhhhcCC---Cc
Confidence 777888899999999999999999999999999999999999999999999999999999999999998665431 13
Q ss_pred CCceeEEEecCCcchHHHHHHHhhcCCCCCCCCcEEEEEcCceeeeecCC-cccccCCCcccccCCCChhHhHHHhhCcH
Q 018126 179 SAAIHWYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDG-RFIMETPYKVAKAPDGNGGVYSALKSSKL 257 (360)
Q Consensus 179 ~~~ipl~IMTS~~t~~~t~~~f~~~~~FGl~~~~v~~f~Q~~~P~~~~~g-ki~l~~~~~i~~~P~GhGgi~~aL~~sg~ 257 (360)
.+.||||||||++||+.|++||++|+|||+++++|+||+|+++||++.+| ++++++++.++++|+||||+|.+|.++|+
T Consensus 160 ~~~ip~~ImtS~~t~~~t~~~~~~~~~fgl~~~~v~~f~Q~~~P~i~~dg~~i~l~~~~~i~~~P~G~Ggi~~aL~~sG~ 239 (486)
T 2yqc_A 160 KPIINWYIMTSGPTRNATESFFIENNYFGLNSHQVIFFNQGTLPCFNLQGNKILLELKNSICQSPDGNGGLYKALKDNGI 239 (486)
T ss_dssp CCCCEEEEEECGGGHHHHHHHHHHTGGGGSCGGGEEEEECCEEECBCTTSSSBCEEETTEECEEECCGGGHHHHHHHTTH
T ss_pred CCccCEEEEECCCCHHHHHHHHhhccccCCCcceEEEEecccceeEcCCCCccccCCCCccccCcCCchHHHHHHHHcCc
Confidence 57899999999999999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHHHHHCCCeEEEEEcCCCccccccCHHHHHHHHHcCCceEEEEeecCCCCcccceEEEEccCCCeEEEEecCCChHHHh
Q 018126 258 LEDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLAS 337 (360)
Q Consensus 258 l~~l~~~Gi~yi~v~~vDN~L~~~~DP~flG~~~~~~~~~~~kvv~K~~p~E~vGvi~~~~~~g~~~vvEYsel~~~~~~ 337 (360)
|++|.++|++|++|+|+||+|++++||.|+|||+.++++++++|++|++|+|++|++|++..||+++||||+|+|+++++
T Consensus 240 Ld~l~~~G~~yi~v~~vDN~l~~~~Dp~~lg~~~~~~~~~~~~vv~k~~~~e~~Gvl~~~~~dg~~~vvEy~E~~~~~~~ 319 (486)
T 2yqc_A 240 LDDLNSKGIKHIHMYCVDNCLVKVADPIFIGFAIAKKFDLATKVVRKRDANESVGLIVLDQDNQKPCVIEYSEISQELAN 319 (486)
T ss_dssp HHHHHHHTCCEEEEEETTBTTCCTTCHHHHHHHHHHTCSEEEEEEECCSTTCCCCEEEEETTTTEEEEECGGGSCHHHHH
T ss_pred HHHHHhcCCeEEEEECCCCceeeccCHHHHHHHHHcCCCEEEEEEEcCCCCCceeEEEEEecCCCEEEEEEecCCHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999998733689999999999999988
Q ss_pred hcccCC--Cceeeeccceeeeeec
Q 018126 338 AINQET--GRLRFCWSNVCTFAST 359 (360)
Q Consensus 338 ~~~~~~--g~l~f~~gni~~h~f~ 359 (360)
.+++ + |.+.|+++|||||+|+
T Consensus 320 ~~~~-~~~~~~~~~~~Ni~~~~~~ 342 (486)
T 2yqc_A 320 KKDP-QDSSKLFLRAANIVNHYYS 342 (486)
T ss_dssp CEET-TEEEEESSCEEEEEEEEEE
T ss_pred cccc-cccccccccceeEEEEEEe
Confidence 7654 4 8899999999999997
|
| >1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A* | Back alignment and structure |
|---|
| >3ogz_A UDP-sugar pyrophosphorylase; LEFT handed beta helix, rossmann fold, UDP sugar pyrophospho transferase; 2.03A {Leishmania major} PDB: 3oh3_A* 3oh1_A* 3oh0_A* 3oh2_A* 3oh4_A* | Back alignment and structure |
|---|
| >3oc9_A UDP-N-acetylglucosamine pyrophosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.80A {Entamoeba histolytica} | Back alignment and structure |
|---|
| >3r3i_A UTP--glucose-1-phosphate uridylyltransferase; rossmann fold, beta barrel, nucleotidyltransferase; 3.57A {Homo sapiens} PDB: 3r2w_A | Back alignment and structure |
|---|
| >3gue_A UTP-glucose-1-phosphate uridylyltransferase 2; phosphatase, UDP, structural GE structural genomics consortium, SGC; HET: UPG PG4; 1.92A {Trypanosoma brucei} | Back alignment and structure |
|---|
| >2oeg_A UTP-glucose-1-phosphate uridylyltransferase 2, putative; rossmann-fold, beta-helix, pyrophosphorylase; HET: UPG; 2.30A {Leishmania major} PDB: 2oef_A* | Back alignment and structure |
|---|
| >2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A* | Back alignment and structure |
|---|
| >4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A* | Back alignment and structure |
|---|
| >3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13 | Back alignment and structure |
|---|
| >1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ... | Back alignment and structure |
|---|
| >1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6 | Back alignment and structure |
|---|
| >1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6 | Back alignment and structure |
|---|
| >3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A* | Back alignment and structure |
|---|
| >3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
| >3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
| >2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori} | Back alignment and structure |
|---|
| >1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A* | Back alignment and structure |
|---|
| >4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae} | Back alignment and structure |
|---|
| >1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A* | Back alignment and structure |
|---|
| >3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A* | Back alignment and structure |
|---|
| >2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A* | Back alignment and structure |
|---|
| >1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A* | Back alignment and structure |
|---|
| >3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0 | Back alignment and structure |
|---|
| >4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A* | Back alignment and structure |
|---|
| >2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus} | Back alignment and structure |
|---|
| >2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli} | Back alignment and structure |
|---|
| >1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A | Back alignment and structure |
|---|
| >2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea} | Back alignment and structure |
|---|
| >3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0 | Back alignment and structure |
|---|
| >2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
| >1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A* | Back alignment and structure |
|---|
| >1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13 | Back alignment and structure |
|---|
| >2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP} | Back alignment and structure |
|---|
| >2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A* | Back alignment and structure |
|---|
| >2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A* | Back alignment and structure |
|---|
| >3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A* | Back alignment and structure |
|---|
| >1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A* | Back alignment and structure |
|---|
| >1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13 | Back alignment and structure |
|---|
| >1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A | Back alignment and structure |
|---|
| >2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A* | Back alignment and structure |
|---|
| >1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A | Back alignment and structure |
|---|
| >2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A | Back alignment and structure |
|---|
| >2cu2_A Putative mannose-1-phosphate guanylyl transferase; mannose-1-phosphate geranyltransferase, thermus thermophilus structural genomics; 2.20A {Thermus thermophilus} SCOP: b.81.4.1 c.68.1.20 | Back alignment and structure |
|---|
| >2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A* | Back alignment and structure |
|---|
| >4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A | Back alignment and structure |
|---|
| >3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
| >2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A* | Back alignment and structure |
|---|
| >3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
| >1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A* | Back alignment and structure |
|---|
| >1jyk_A LICC protein, CTP:phosphocholine cytidylytransferase; 3D structure, CTP:phosphocholine cytidylyltransferase; 1.50A {Streptococcus pneumoniae} SCOP: c.68.1.13 PDB: 1jyl_A* | Back alignment and structure |
|---|
| >2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
| >3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
| >1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A* | Back alignment and structure |
|---|
| >2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A* | Back alignment and structure |
|---|
| >2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus} | Back alignment and structure |
|---|
| >2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19 | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 360 | ||||
| d1jv1a_ | 501 | c.68.1.5 (A:) UDP-N-acetylglucosamine pyrophosphor | 1e-118 | |
| d2icya2 | 378 | c.68.1.5 (A:6-383) UDP-glucose pyrophosphorylase 2 | 4e-75 | |
| d1w55a1 | 205 | c.68.1.13 (A:3-207) IspD/IspF bifunctional enzyme, | 2e-05 | |
| d1w77a1 | 226 | c.68.1.13 (A:75-300) 4-diphosphocytidyl-2C-methyl- | 1e-04 | |
| d1i52a_ | 225 | c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-eryt | 8e-04 | |
| d2oi6a2 | 248 | c.68.1.5 (A:4-251) N-acetylglucosamine 1-phosphate | 8e-04 | |
| d2cu2a2 | 268 | c.68.1.20 (A:1-268) Putative mannose-1-phosphate g | 0.001 | |
| d1vpaa_ | 221 | c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-eryt | 0.002 |
| >d1jv1a_ c.68.1.5 (A:) UDP-N-acetylglucosamine pyrophosphorylase {Human (Homo sapiens), AGX1 [TaxId: 9606]} Length = 501 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: UDP-glucose pyrophosphorylase domain: UDP-N-acetylglucosamine pyrophosphorylase species: Human (Homo sapiens), AGX1 [TaxId: 9606]
Score = 350 bits (898), Expect = e-118
Identities = 142/337 (42%), Positives = 194/337 (57%), Gaps = 15/337 (4%)
Query: 26 QALLERLKDYGQEDAFALWDELSPDERDHLVKDIESLDLPRVDRIIRCSLRS------QG 79
L L GQE W+EL ++ L ++++++ ++ + ++ Q
Sbjct: 4 NDLKLTLSKAGQEHLLRFWNELEEAQQVELYAELQAMNFEELNFFFQKAIEGFNQSSHQK 63
Query: 80 LPVAAIEPVPERSVSTVEERTMDERERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPK 139
A +EPVP + + R D+ + W GL IS K+AVLLL+GGQGTRLG + PK
Sbjct: 64 NVDARMEPVPREVLGSAT-RDQDQLQAWESEGLFQISQNKVAVLLLAGGQGTRLGVAYPK 122
Query: 140 GCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRKY 199
G ++GLPS K+LFQ+QAERIL +Q++A + I WYIMTS T ++T+++
Sbjct: 123 GMYDVGLPSRKTLFQIQAERILKLQQVAEKYYGNKC-----IIPWYIMTSGRTMESTKEF 177
Query: 200 FEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLE 259
F HKYFGL+ + V FFQQG +P +S DG+ I+E KV+ APDGNGG+Y AL + ++E
Sbjct: 178 FTKHKYFGLKKENVIFFQQGMLPAMSFDGKIILEEKNKVSMAPDGNGGLYRALAAQNIVE 237
Query: 260 DMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGK 319
DM RGI I Y VDN LV+VADP F+G+ I KG GAKVV K P E VGV R
Sbjct: 238 DMEQRGIWSIHVYCVDNILVKVADPRFIGFCIQKGADCGAKVVEKTNPTEPVGVVCR--V 295
Query: 320 GGPLTVVEYSELDPSLASAINQETGRLRFCWSNVCTF 356
G VVEYSE+ + A GRL F N+
Sbjct: 296 DGVYQVVEYSEISLATAQK-RSSDGRLLFNAGNIANH 331
|
| >d1w55a1 c.68.1.13 (A:3-207) IspD/IspF bifunctional enzyme, CDP-me synthase domain {Campylobacter jejuni [TaxId: 197]} Length = 205 | Back information, alignment and structure |
|---|
| >d1w77a1 c.68.1.13 (A:75-300) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]} Length = 226 | Back information, alignment and structure |
|---|
| >d1i52a_ c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Escherichia coli [TaxId: 562]} Length = 225 | Back information, alignment and structure |
|---|
| >d2oi6a2 c.68.1.5 (A:4-251) N-acetylglucosamine 1-phosphate uridyltransferase GlmU, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 248 | Back information, alignment and structure |
|---|
| >d2cu2a2 c.68.1.20 (A:1-268) Putative mannose-1-phosphate guanylyl transferase (GDP)/mannose-6-phosphate isomerase TTHA1750 {Thermus thermophilus [TaxId: 274]} Length = 268 | Back information, alignment and structure |
|---|
| >d1vpaa_ c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Thermotoga maritima [TaxId: 2336]} Length = 221 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 360 | |||
| d1jv1a_ | 501 | UDP-N-acetylglucosamine pyrophosphorylase {Human ( | 100.0 | |
| d2icya2 | 378 | UDP-glucose pyrophosphorylase 2 (UDPGP 2) {Thale c | 100.0 | |
| d1fxoa_ | 292 | RmlA (RfbA) {Pseudomonas aeruginosa [TaxId: 287]} | 99.11 | |
| d1mc3a_ | 291 | RffH {Escherichia coli [TaxId: 562]} | 99.03 | |
| d1yp2a2 | 307 | Glucose-1-phosphate adenylyltransferase small subu | 98.92 | |
| d1lvwa_ | 295 | RmlA (RfbA) {Archaeon Methanobacterium thermoautot | 98.9 | |
| d1g97a2 | 250 | N-acetylglucosamine 1-phosphate uridyltransferase | 98.68 | |
| d2cu2a2 | 268 | Putative mannose-1-phosphate guanylyl transferase | 98.66 | |
| d1tzfa_ | 259 | Glucose-1-phosphate cytidylyltransferase RfbF {Sal | 98.49 | |
| d2oi6a2 | 248 | N-acetylglucosamine 1-phosphate uridyltransferase | 98.45 | |
| d1vpaa_ | 221 | 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) | 98.13 | |
| d1w77a1 | 226 | 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) | 98.06 | |
| d1i52a_ | 225 | 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) | 97.98 | |
| d1jyka_ | 229 | CTP:phosphocholine cytidylytransferase LicC {Strep | 97.91 | |
| d1vgwa_ | 226 | 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) | 97.85 | |
| d1w55a1 | 205 | IspD/IspF bifunctional enzyme, CDP-me synthase dom | 97.67 | |
| d1e5ka_ | 188 | Molybdenum cofactor biosynthesis protein MobA {Esc | 97.49 | |
| d2dpwa1 | 231 | Uncharacterized protein TTHA0179 {Thermus thermoph | 97.41 | |
| d1qwja_ | 228 | CMP acylneuraminate synthetase {Mouse (Mus musculu | 91.01 | |
| d1eyra_ | 225 | CMP acylneuraminate synthetase {Neisseria meningit | 88.03 | |
| d1h7ea_ | 245 | CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)syn | 85.63 |
| >d1jv1a_ c.68.1.5 (A:) UDP-N-acetylglucosamine pyrophosphorylase {Human (Homo sapiens), AGX1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: UDP-glucose pyrophosphorylase domain: UDP-N-acetylglucosamine pyrophosphorylase species: Human (Homo sapiens), AGX1 [TaxId: 9606]
Probab=100.00 E-value=9e-88 Score=686.05 Aligned_cols=328 Identities=43% Similarity=0.703 Sum_probs=304.6
Q ss_pred CCHHHHHHHHHHCCCchhccccccCCHHHHHHHHHHHhcCChHHHHHHHHHHHhc------CCCCCCCcccCCCCCcccc
Q 018126 23 PPPQALLERLKDYGQEDAFALWDELSPDERDHLVKDIESLDLPRVDRIIRCSLRS------QGLPVAAIEPVPERSVSTV 96 (360)
Q Consensus 23 ~~~~~l~~~l~~~gQ~Hl~~~~~~l~~~ek~~L~~ql~~iD~~~~~~~~~~~~~~------~~~~~~~~~p~p~~~~~~~ 96 (360)
|+.++|+++|+++||+|||++|++|+++||++|++||.++|++.+.++|+++++. ...++..++|+|+..+...
T Consensus 1 m~~~~l~~~L~~~gQ~HLl~~~~~l~~~ek~~L~~qL~~id~~~l~~~~~~a~~~~~~~~~~~~~~~~~~p~p~~~~~~~ 80 (501)
T d1jv1a_ 1 MNINDLKLTLSKAGQEHLLRFWNELEEAQQVELYAELQAMNFEELNFFFQKAIEGFNQSSHQKNVDARMEPVPREVLGSA 80 (501)
T ss_dssp CCHHHHHHHHHHTTCGGGGTTGGGSCHHHHHHHHHHHHTCCHHHHHHHHHHHHHCC-----------CCBCCCGGGEEET
T ss_pred CCHHHHHHHHHHhCcHHHHhhhhhCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhhcccccCccccccCCChhhhccc
Confidence 5788999999999999999999999999999999999999999999999988652 1246778999988655444
Q ss_pred ccCChHHHHHHHHHhhhhhcCCCEEEEEecCCCccccCCCCCCCceeecCCCCCccHHHHHHHHHHHHHHHHhhhcCCCC
Q 018126 97 EERTMDERERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGG 176 (360)
Q Consensus 97 ~~~~~~~~~~~~~~G~~~i~~gkvavvlLAGG~GTRLg~~~pKg~~~i~l~s~ksllql~~e~i~~lq~la~~~~~~~~~ 176 (360)
.. ..+...+|+++|+++|++||||+|+||||+|||||+++|||++||++++++||||++++||++++++|.++++
T Consensus 81 ~~-~~~~~~~~~~~G~~~i~~gkvavvllaGG~GTRLG~~~pK~~~~v~~~~~ksllql~~e~i~~l~~~a~~~~~---- 155 (501)
T d1jv1a_ 81 TR-DQDQLQAWESEGLFQISQNKVAVLLLAGGQGTRLGVAYPKGMYDVGLPSRKTLFQIQAERILKLQQVAEKYYG---- 155 (501)
T ss_dssp TT-TGGGHHHHHHHHHHHHHTTCEEEEEECCCCCCTTSCSSCGGGCCCCCTTCCCHHHHHHHHHHHHHHHHHHHHS----
T ss_pred cc-ChHHHHHHHHhhHHHHhcCCEEEEEECCCccccCCCCCCceeeeeccCCCCcHHHHHHHHHHHHHHHHHHhcC----
Confidence 33 3456788999999999999999999999999999999999999999999999999999999999999887654
Q ss_pred CCCCceeEEEecCCcchHHHHHHHhhcCCCCCCCCcEEEEEcCceeeeecCCcccccCCCcccccCCCChhHhHHHhhCc
Q 018126 177 SGSAAIHWYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSK 256 (360)
Q Consensus 177 ~~~~~ipl~IMTS~~t~~~t~~~f~~~~~FGl~~~~v~~f~Q~~~P~~~~~gki~l~~~~~i~~~P~GhGgi~~aL~~sg 256 (360)
+++.||||||||+.||++|++||++|+|||+++++|+||+|+++||++.+|+++++++++++|+|+||||+|.+|.++|
T Consensus 156 -~~~~iPl~IMtS~~T~~~t~~~l~~~~~FGl~~~~v~~f~Q~~~P~~~~~g~i~~~~~~~i~~~P~GhG~i~~aL~~sG 234 (501)
T d1jv1a_ 156 -NKCIIPWYIMTSGRTMESTKEFFTKHKYFGLKKENVIFFQQGMLPAMSFDGKIILEEKNKVSMAPDGNGGLYRALAAQN 234 (501)
T ss_dssp -SCCCCCEEEEECTTTHHHHHHHHHHTGGGGSCGGGEEEEECCEEECEETTSCBCEEETTEECEEECCGGGHHHHHHHTT
T ss_pred -CCCCceEEEECChhHhHHHHHHHHhccccCCCcCceEEEEecCcceECCCCCcccCCCCcccccCCCchHHHHHHHHCC
Confidence 5788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCeEEEEEcCCCccccccCHHHHHHHHHcCCceEEEEeecCCCCcccceEEEEccCCCeEEEEecCCChHHH
Q 018126 257 LLEDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLA 336 (360)
Q Consensus 257 ~l~~l~~~Gi~yi~v~~vDN~L~~~~DP~flG~~~~~~~~~~~kvv~K~~p~E~vGvi~~~~~~g~~~vvEYsel~~~~~ 336 (360)
++++|.++|++|++++||||+|++++||.|||||+.++++|++||++|++|+|+||++|++ ||+++||||+|+|++++
T Consensus 235 ~ld~l~~~Gi~yi~v~~vDN~l~~~~Dp~~lG~~~~~~~~~~~kvv~k~~~~e~~G~l~~~--dg~~~vvEysel~~~~~ 312 (501)
T d1jv1a_ 235 IVEDMEQRGIWSIHVYCVDNILVKVADPRFIGFCIQKGADCGAKVVEKTNPTEPVGVVCRV--DGVYQVVEYSEISLATA 312 (501)
T ss_dssp HHHHHHHTTCCEEEEEETTBTTCCTTCHHHHHHHHHTTCSEEEEEEECCSTTCSCCEEEEE--TTEEEEECGGGSCHHHH
T ss_pred cHHHHHHCCCEEEEEEecCCccccccCHHHHHHHHhcccceeEEEEEcCCCCcccceEEEE--CCeEEEEEeccCCHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999998 79999999999999999
Q ss_pred hhcccCCCceeeeccceeeeeec
Q 018126 337 SAINQETGRLRFCWSNVCTFAST 359 (360)
Q Consensus 337 ~~~~~~~g~l~f~~gni~~h~f~ 359 (360)
+++++ +|+|.|++||||||+|+
T Consensus 313 ~~~~~-~g~l~f~~~Ni~~~~fs 334 (501)
T d1jv1a_ 313 QKRSS-DGRLLFNAGNIANHFFT 334 (501)
T ss_dssp HCBCT-TSSBSSCEEEEEEEEEE
T ss_pred hhccC-CCcccccccceeheeeE
Confidence 88764 89999999999999997
|
| >d1fxoa_ c.68.1.6 (A:) RmlA (RfbA) {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
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| >d1mc3a_ c.68.1.6 (A:) RffH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1yp2a2 c.68.1.6 (A:10-316) Glucose-1-phosphate adenylyltransferase small subunit, catalytic domain {Potato (Solanum tuberosum) [TaxId: 4113]} | Back information, alignment and structure |
|---|
| >d1lvwa_ c.68.1.6 (A:) RmlA (RfbA) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
| >d1g97a2 c.68.1.5 (A:2-251) N-acetylglucosamine 1-phosphate uridyltransferase GlmU, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
| >d2cu2a2 c.68.1.20 (A:1-268) Putative mannose-1-phosphate guanylyl transferase (GDP)/mannose-6-phosphate isomerase TTHA1750 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1tzfa_ c.68.1.13 (A:) Glucose-1-phosphate cytidylyltransferase RfbF {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
| >d2oi6a2 c.68.1.5 (A:4-251) N-acetylglucosamine 1-phosphate uridyltransferase GlmU, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1vpaa_ c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1w77a1 c.68.1.13 (A:75-300) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d1i52a_ c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1jyka_ c.68.1.13 (A:) CTP:phosphocholine cytidylytransferase LicC {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
| >d1vgwa_ c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Neisseria gonorrhoeae [TaxId: 485]} | Back information, alignment and structure |
|---|
| >d1w55a1 c.68.1.13 (A:3-207) IspD/IspF bifunctional enzyme, CDP-me synthase domain {Campylobacter jejuni [TaxId: 197]} | Back information, alignment and structure |
|---|
| >d1e5ka_ c.68.1.8 (A:) Molybdenum cofactor biosynthesis protein MobA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2dpwa1 c.68.1.19 (A:1-231) Uncharacterized protein TTHA0179 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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| >d1qwja_ c.68.1.13 (A:) CMP acylneuraminate synthetase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1eyra_ c.68.1.13 (A:) CMP acylneuraminate synthetase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
| >d1h7ea_ c.68.1.13 (A:) CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)synthetase {Escherichia coli, KpsU [TaxId: 562]} | Back information, alignment and structure |
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