Citrus Sinensis ID: 018131


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360
MEFHLLPILAFLSLALVASHADISPELYWKTVLPNSPMPKAVKDLLQPDVLEDKSTSVNVGKGGVNVDAGKGKPGGGTHVNVGGKGVGVNTGKPDKRTSVGVGKGGVSVSTGHKGKPVYVGVSPFNYVYAANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLGKSVQAISTEVKKGTKMQTYTIAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAKAAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVWVPNKKTGE
ccccHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHccccccccccccccccccccEEccccccccccccccccccccccccccccccccccccccccEEccccccccccccccccccccccccccccccccccccEEccccccccccccccccccccccccccccccccccccccHHHHHHccccccccHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHccccEEEEEEEcccccccEEEEEEEEEEEccccccEEcccccccEEEEEccccccEEEEEEEccccccccEEEEEEEEccccccccccHHHHHHHcccccccEEEEEEcccEEEEEcccccc
cccHHHHHHHHHHHHHHHHHccccHHHHHHHHccccccHHHHHHHcccHHHcccccEEEcccccccccccccccccccccccccccccccccccccccEEEEEccccEccccccccccccccccHHHHcccccccccccccccEEEEHHHcccccEEcEcccccccccccccHHHHHcccccHHHHHHHHHHcccccccHHHHHHHHHHHHHccccccccccHHHccHHHHHHHHHHHHcccEEEEEEcccccccccEEEEEEEEEccccccEEEEccccccEEEEEEEcccccEEEEEEEEcccccEEEEEEEEEcccccccccccEEEEEccccccccEEEEcccccEEEEEcccccc
MEFHLLPILAFLSLALVAshadispelywktvlpnspmpkavkdllqpdvledkstsvnvgkggvnvdagkgkpgggthvnvggkgvgvntgkpdkrtsvgvgkggvsvstghkgkpvyvgvsPFNYVYaanenqlhddpntaLFFLekdlhpgmkmnlhftqtsngatflsrqaakstpfssdklpeifnqfsvkpgsvEAEIMQNTIkecedpgikgeqkYCATSLESMIDFSTSKLGKSVQAISTEVKKGTKMQTYTIAAGVKQMAADKsvvchkqnypyavfychatqttraymvplegadgtkAKAAAVChtdtsawnpkhLAFQVLkvkpgtvpichflpedhivwvpnkktge
MEFHLLPILAFLSLALVASHADISPELYWKTVLPNSPMPKAVKDLLQPDVLEDKstsvnvgkggvnvdagkgkpgggthvnvggkgvgvntgkpdkrtsvgvgkggvsvstghkgkpvYVGVSPFNYVYAANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTikecedpgikGEQKYCATSLESMIDFSTSKLGKSVQAIStevkkgtkmQTYTIAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAKAAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHflpedhivwvpnkktge
MEFHllpilaflslalVASHADISPELYWKTVLPNSPMPKAVKDLLQPDVLEDKSTSVNVGKGGVNVDAGKgkpgggthvnvggkgvgvntgkpDKRtsvgvgkggvsvstghkgkPVYVGVSPFNYVYAANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLGKSVQAISTEVKKGTKMQTYTIAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAKAAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVWVPNKKTGE
**FHLLPILAFLSLALVASHADISPELYWKTVLP****************************************************************************TGHKGKPVYVGVSPFNYVYAANENQLHDDPNTALFFLEKDLHPGMKMNLHFT**********************************************************QKYCATSLESMIDFS*******VQAISTEVKKGTKMQTYTIAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAKAAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVWVP******
**FHLLPILAFLSLALVASHADISPELYWKTVLPNSPMPKAVKDLLQ*********************************************KPDKRTSVGVGKGGVSVS***************N***********DDPNTALFFLEKDLHPGMK*************FLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECE*************SLESMIDFSTSKLGKSVQA***************************SVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAKAAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVWVPNK****
MEFHLLPILAFLSLALVASHADISPELYWKTVLPNSPMPKAVKDLLQPDVLEDKSTSVNVGKGGVNVDAGKGKPGGGTHVNVGGKGVGVNTGKPDKRTSVGVGKGGVSVSTGHKGKPVYVGVSPFNYVYAANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSR********SSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLGKSVQAISTEVKKGTKMQTYTIAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAKAAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVWVPNKKTGE
*EFHLLPILAFLSLALVASHADISPELYWKTVLPNSPMPKAVKDLLQPDVLEDKSTSVNVGKGGVNVD*************************PDKRTSVGVGKGGVSVSTGHKGKPVYVGVSPFNYVYAANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLGKSVQAISTEVKKGTKMQTYTIAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAKAAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVWVPNK****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MEFHLLPILAFLSLALVASHADISPELYWKTVLPNSPMPKAVKDLLQPDVLEDKSTSVNVGKGGVNVDAGKGKPGGGTHVNVGGKGVGVNTGKPDKRTSVGVGKGGVSVSTGHKGKPVYVGVSPFNYVYAANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLGKSVQAISTEVKKGTKMQTYTIAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAKAAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVWVPNKKTGE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query360 2.2.26 [Sep-21-2011]
Q08298392 Dehydration-responsive pr yes no 0.963 0.885 0.574 1e-110
Q942D4429 BURP domain-containing pr yes no 0.661 0.554 0.624 4e-85
Q0JEP3324 BURP domain-containing pr no no 0.777 0.864 0.415 9e-65
B9G9L9585 BURP domain-containing pr no no 0.605 0.372 0.523 2e-59
Q70KG3362 Protein RAFTIN 1B OS=Trit N/A no 0.927 0.922 0.335 5e-50
Q6I5B2239 BURP domain-containing pr no no 0.627 0.945 0.474 3e-49
Q70KG5389 Protein RAFTIN 1A OS=Trit N/A no 0.930 0.861 0.321 2e-47
Q7F8U7412 BURP domain-containing pr no no 0.905 0.791 0.314 4e-44
Q6I5W0287 BURP domain-containing pr no no 0.6 0.752 0.452 8e-44
Q75G46314 BURP domain-containing pr no no 0.619 0.710 0.432 5e-41
>sp|Q08298|RD22_ARATH Dehydration-responsive protein RD22 OS=Arabidopsis thaliana GN=RD22 PE=2 SV=1 Back     alignment and function desciption
 Score =  398 bits (1023), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 221/385 (57%), Positives = 265/385 (68%), Gaps = 38/385 (9%)

Query: 6   LPILAFL-SLALVASHADISPELYWKTVLPNSPMPKAVKDLLQPDVLEDKSTSVNVGKGG 64
           LP++  L S  +VA  AD++PE YW T LPN+P+P ++ +LL  D  ++KST+V VGKGG
Sbjct: 5   LPLICLLGSFMVVAIAADLTPERYWSTALPNTPIPNSLHNLLTFDFTDEKSTNVQVGKGG 64

Query: 65  VNVDAGKGKPGGGTHVNVGGKGV---------------------------GVNTGKPDKR 97
           VNV+  KGK G GT VNVG  GV                            V+TGKP KR
Sbjct: 65  VNVNTHKGKTGSGTAVNVGKGGVRVDTGKGKPGGGTHVSVGSGKGHGGGVAVHTGKPGKR 124

Query: 98  TSVGVGKGGVSVSTGHKGKPVYVGV----SPFNYVYAANENQLHDDPNTALFFLEKDLHP 153
           T VGVGKGGV+V T HKG+P+YVGV    +PF Y YAA E QLHDDPN ALFFLEKDL  
Sbjct: 125 TDVGVGKGGVTVHTRHKGRPIYVGVKPGANPFVYNYAAKETQLHDDPNAALFFLEKDLVR 184

Query: 154 GMKMNLHFTQTSN--GAT-FLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIK 210
           G +MN+ F       G T FL R  A++ PF S+K  E   +FSV+ GS EAE+M+ TI+
Sbjct: 185 GKEMNVRFNAEDGYGGKTAFLPRGEAETVPFGSEKFSETLKRFSVEAGSEEAEMMKKTIE 244

Query: 211 ECEDPGIKGEQKYCATSLESMIDFSTSKLGK-SVQAISTEV-KKGTKMQTYTIAA-GVKQ 267
           ECE   + GE+KYCATSLESM+DFS SKLGK  V+A+STEV KK   MQ Y IAA GVK+
Sbjct: 245 ECEARKVSGEEKYCATSLESMVDFSVSKLGKYHVRAVSTEVAKKNAPMQKYKIAAAGVKK 304

Query: 268 MAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAKAAAVCHTDTSAWNPKHL 327
           ++ DKSVVCHKQ YP+AVFYCH    T  Y VPLEG +G +AKA AVCH +TSAWNP HL
Sbjct: 305 LSDDKSVVCHKQKYPFAVFYCHKAMMTTVYAVPLEGENGMRAKAVAVCHKNTSAWNPNHL 364

Query: 328 AFQVLKVKPGTVPICHFLPEDHIVW 352
           AF+VLKVKPGTVP+CHFLPE H+VW
Sbjct: 365 AFKVLKVKPGTVPVCHFLPETHVVW 389





Arabidopsis thaliana (taxid: 3702)
>sp|Q942D4|BURP3_ORYSJ BURP domain-containing protein 3 OS=Oryza sativa subsp. japonica GN=BURP3 PE=2 SV=1 Back     alignment and function description
>sp|Q0JEP3|BURP5_ORYSJ BURP domain-containing protein 5 OS=Oryza sativa subsp. japonica GN=BURP5 PE=2 SV=2 Back     alignment and function description
>sp|B9G9L9|BURPH_ORYSJ BURP domain-containing protein 17 OS=Oryza sativa subsp. japonica GN=BURP17 PE=2 SV=1 Back     alignment and function description
>sp|Q70KG3|RAF1B_WHEAT Protein RAFTIN 1B OS=Triticum aestivum GN=RAFTIN1B PE=1 SV=1 Back     alignment and function description
>sp|Q6I5B2|BURP6_ORYSJ BURP domain-containing protein 6 OS=Oryza sativa subsp. japonica GN=BURP6 PE=2 SV=1 Back     alignment and function description
>sp|Q70KG5|RAF1A_WHEAT Protein RAFTIN 1A OS=Triticum aestivum GN=RAFTIN1A PE=1 SV=1 Back     alignment and function description
>sp|Q7F8U7|BURPD_ORYSJ BURP domain-containing protein 13 OS=Oryza sativa subsp. japonica GN=BURP13 PE=1 SV=1 Back     alignment and function description
>sp|Q6I5W0|BURP2_ORYSJ BURP domain-containing protein 2 OS=Oryza sativa subsp. japonica GN=BURP2 PE=2 SV=1 Back     alignment and function description
>sp|Q75G46|BURP8_ORYSJ BURP domain-containing protein 8 OS=Oryza sativa subsp. japonica GN=BURP8 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query360
255551066379 Dehydration-responsive protein RD22 prec 0.986 0.936 0.735 1e-150
224089066401 predicted protein [Populus trichocarpa] 0.983 0.882 0.679 1e-150
118486691421 unknown [Populus trichocarpa] 0.983 0.840 0.639 1e-145
49615303376 dehydration-induced protein RD22-like pr 0.972 0.930 0.696 1e-139
225430045337 PREDICTED: dehydration-responsive protei 0.922 0.985 0.709 1e-137
225430043364 PREDICTED: dehydration-responsive protei 0.983 0.972 0.713 1e-135
54645911364 RD22-like protein [Vitis vinifera] 0.983 0.972 0.710 1e-134
224141799331 predicted protein [Populus trichocarpa] 0.913 0.993 0.729 1e-133
255639828367 unknown [Glycine max] 0.980 0.961 0.673 1e-133
351723823367 BURP domain-containing protein precursor 0.980 0.961 0.673 1e-133
>gi|255551066|ref|XP_002516581.1| Dehydration-responsive protein RD22 precursor, putative [Ricinus communis] gi|223544401|gb|EEF45922.1| Dehydration-responsive protein RD22 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  537 bits (1384), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 275/374 (73%), Positives = 305/374 (81%), Gaps = 19/374 (5%)

Query: 1   MEFHLLPILAFLSLALVASHADISPELYWKTVLPNSPMPKAVKDLLQPDVLEDKSTSVNV 60
           MEF L  IL FL++AL  SHA + PE+YWK+VLPN+ MPKAV DLLQ   ++DKSTSV+V
Sbjct: 6   MEFSLPCILVFLTIALATSHAALPPEVYWKSVLPNTQMPKAVTDLLQSGFMDDKSTSVSV 65

Query: 61  GKGGVNVDAGKGKPGG-------------------GTHVNVGGKGVGVNTGKPDKRTSVG 101
           GKG VNV+AGKGKPGG                   GT VNVG KGVGVNTGKP K T+VG
Sbjct: 66  GKGSVNVNAGKGKPGGTSVNVGKGGVNVNTRKGKPGTTVNVGRKGVGVNTGKPGKGTNVG 125

Query: 102 VGKGGVSVSTGHKGKPVYVGVSPFNYVYAANENQLHDDPNTALFFLEKDLHPGMKMNLHF 161
           VGKGGVSV+TGHKGKPV+V V+PF Y YAA E QLH DPN ALFFLEKD++P   MNLHF
Sbjct: 126 VGKGGVSVNTGHKGKPVHVNVAPFIYNYAATETQLHHDPNVALFFLEKDMYPRKTMNLHF 185

Query: 162 TQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGEQ 221
           T+  N A FL RQ AKS PFSS +LPEI+NQFSVKPGS+EAE+M+NTIKECE PGI+GE+
Sbjct: 186 TENPNTAMFLPRQVAKSIPFSSKELPEIYNQFSVKPGSMEAELMKNTIKECEAPGIEGEE 245

Query: 222 KYCATSLESMIDFSTSKLGKSVQAISTEVKKGTKMQTYTIAAGVKQMAADKSVVCHKQNY 281
           K CATSLESMIDFSTS LGK+VQAISTEV+  T+MQ YTI AG K+MA DKSVVCHKQNY
Sbjct: 246 KLCATSLESMIDFSTSVLGKNVQAISTEVENQTQMQKYTITAGAKEMAGDKSVVCHKQNY 305

Query: 282 PYAVFYCHATQTTRAYMVPLEGADGTKAKAAAVCHTDTSAWNPKHLAFQVLKVKPGTVPI 341
            YAVFYCHATQTTRAYMV LEGADGTKAKA AVCHTDTS WN KHLAFQVLKVKPGTVP+
Sbjct: 306 AYAVFYCHATQTTRAYMVSLEGADGTKAKAVAVCHTDTSTWNTKHLAFQVLKVKPGTVPV 365

Query: 342 CHFLPEDHIVWVPN 355
           CHFLP+DHIVWVPN
Sbjct: 366 CHFLPQDHIVWVPN 379




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224089066|ref|XP_002308621.1| predicted protein [Populus trichocarpa] gi|222854597|gb|EEE92144.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|118486691|gb|ABK95182.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
>gi|49615303|gb|AAT66913.1| dehydration-induced protein RD22-like protein 2 [Gossypium arboreum] Back     alignment and taxonomy information
>gi|225430045|ref|XP_002284286.1| PREDICTED: dehydration-responsive protein RD22 [Vitis vinifera] gi|227464475|gb|ACP40551.1| rd22-c [Vitis vinifera] Back     alignment and taxonomy information
>gi|225430043|ref|XP_002284269.1| PREDICTED: dehydration-responsive protein RD22 [Vitis vinifera] Back     alignment and taxonomy information
>gi|54645911|gb|AAV36561.1| RD22-like protein [Vitis vinifera] Back     alignment and taxonomy information
>gi|224141799|ref|XP_002324250.1| predicted protein [Populus trichocarpa] gi|222865684|gb|EEF02815.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255639828|gb|ACU20207.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|351723823|ref|NP_001238316.1| BURP domain-containing protein precursor [Glycine max] gi|188474279|gb|ACD49739.1| BURP domain-containing protein [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query360
TAIR|locus:2179424392 RD22 "RESPONSIVE TO DESSICATIO 0.825 0.757 0.544 2.3e-95
UNIPROTKB|Q70KG3362 RAFTIN1B "Protein RAFTIN 1B" [ 0.6 0.596 0.418 5.4e-51
UNIPROTKB|Q7F8U7412 BURP13 "BURP domain-containing 0.6 0.524 0.410 7.7e-50
UNIPROTKB|Q70KG5389 RAFTIN1A "Protein RAFTIN 1A" [ 0.594 0.550 0.408 4.2e-49
TAIR|locus:2010237280 USPL1 "AT1G49320" [Arabidopsis 0.6 0.771 0.359 1.3e-36
TAIR|locus:2195593624 PG1 "AT1G60390" [Arabidopsis t 0.577 0.333 0.358 2e-30
TAIR|locus:2016194626 PG2 "AT1G70370" [Arabidopsis t 0.577 0.332 0.358 4.2e-29
TAIR|locus:2034823622 JP630 "AT1G23760" [Arabidopsis 0.508 0.294 0.377 8.8e-29
TAIR|locus:2179424 RD22 "RESPONSIVE TO DESSICATION 22" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 808 (289.5 bits), Expect = 2.3e-95, Sum P(2) = 2.3e-95
 Identities = 170/312 (54%), Positives = 198/312 (63%)

Query:    56 TSVNVGKGGVNVDAGKX-----XXXXXXXXXXXXXXXXXXXXXXDKRXXXXXXXXXXXXX 110
             T+VNVGKGGV VD GK                             KR             
Sbjct:    78 TAVNVGKGGVRVDTGKGKPGGGTHVSVGSGKGHGGGVAVHTGKPGKRTDVGVGKGGVTVH 137

Query:   111 XXXXXXPVYVGV----SPFNYVYAANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSN 166
                   P+YVGV    +PF Y YAA E QLHDDPN ALFFLEKDL  G +MN+ F     
Sbjct:   138 TRHKGRPIYVGVKPGANPFVYNYAAKETQLHDDPNAALFFLEKDLVRGKEMNVRFNAEDG 197

Query:   167 --GAT-FLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGEQKY 223
               G T FL R  A++ PF S+K  E   +FSV+ GS EAE+M+ TI+ECE   + GE+KY
Sbjct:   198 YGGKTAFLPRGEAETVPFGSEKFSETLKRFSVEAGSEEAEMMKKTIEECEARKVSGEEKY 257

Query:   224 CATSLESMIDFSTSKLGK-SVQAISTEV-KKGTKMQTYTIAA-GVKQMAADKSVVCHKQN 280
             CATSLESM+DFS SKLGK  V+A+STEV KK   MQ Y IAA GVK+++ DKSVVCHKQ 
Sbjct:   258 CATSLESMVDFSVSKLGKYHVRAVSTEVAKKNAPMQKYKIAAAGVKKLSDDKSVVCHKQK 317

Query:   281 YPYAVFYCHATQTTRAYMVPLEGADGTKAKAAAVCHTDTSAWNPKHLAFQVLKVKPGTVP 340
             YP+AVFYCH    T  Y VPLEG +G +AKA AVCH +TSAWNP HLAF+VLKVKPGTVP
Sbjct:   318 YPFAVFYCHKAMMTTVYAVPLEGENGMRAKAVAVCHKNTSAWNPNHLAFKVLKVKPGTVP 377

Query:   341 ICHFLPEDHIVW 352
             +CHFLPE H+VW
Sbjct:   378 VCHFLPETHVVW 389


GO:0005576 "extracellular region" evidence=ISM
GO:0009269 "response to desiccation" evidence=IEP;RCA
GO:0009737 "response to abscisic acid stimulus" evidence=IEP;RCA
GO:0045735 "nutrient reservoir activity" evidence=TAS
GO:0009409 "response to cold" evidence=RCA
GO:0009651 "response to salt stress" evidence=IEP;RCA
GO:0005768 "endosome" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0005802 "trans-Golgi network" evidence=IDA
UNIPROTKB|Q70KG3 RAFTIN1B "Protein RAFTIN 1B" [Triticum aestivum (taxid:4565)] Back     alignment and assigned GO terms
UNIPROTKB|Q7F8U7 BURP13 "BURP domain-containing protein 13" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|Q70KG5 RAFTIN1A "Protein RAFTIN 1A" [Triticum aestivum (taxid:4565)] Back     alignment and assigned GO terms
TAIR|locus:2010237 USPL1 "AT1G49320" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2195593 PG1 "AT1G60390" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2016194 PG2 "AT1G70370" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2034823 JP630 "AT1G23760" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q08298RD22_ARATHNo assigned EC number0.57400.96380.8852yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
eugene3.00061755
hypothetical protein (401 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query360
pfam03181216 pfam03181, BURP, BURP domain 1e-126
smart01045222 smart01045, BURP, The BURP domain is found at the 2e-83
>gnl|CDD|202568 pfam03181, BURP, BURP domain Back     alignment and domain information
 Score =  360 bits (927), Expect = e-126
 Identities = 146/217 (67%), Positives = 169/217 (77%), Gaps = 5/217 (2%)

Query: 143 ALFFLEKDLHPGMKMNLHFTQTSNGA--TFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSV 200
            LFFLEKDL PG KM LHF + ++GA   FL RQ A S PFSS+KLPEI   FSV PGSV
Sbjct: 1   GLFFLEKDLKPGKKMPLHFPKITDGAKRPFLPRQIADSIPFSSEKLPEILAMFSVPPGSV 60

Query: 201 EAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLGKS-VQAISTEVKKGTKMQTY 259
           EA+IM++T++ECE P IKGE+K+CATSLESM+DF+TSKLG   ++A+STEV+ G  +Q Y
Sbjct: 61  EAKIMKSTLRECEAPAIKGEEKFCATSLESMVDFATSKLGTRDIRAVSTEVEGGGPLQKY 120

Query: 260 TIAAGVKQMAADKSVV-CHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAKAAAVCHTD 318
           T+  GVK +A    VV CH   YPYAVFYCH    TRAY V L GADGTK KA AVCHTD
Sbjct: 121 TVE-GVKPVAGGGKVVACHPMLYPYAVFYCHTVPKTRAYEVDLVGADGTKVKAVAVCHTD 179

Query: 319 TSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVWVPN 355
           TSAWNPKH+AFQVL VKPGTVP+CHFLPE H+VWVPN
Sbjct: 180 TSAWNPKHVAFQVLGVKPGTVPVCHFLPEGHVVWVPN 216


The BURP domain is found at the C-terminus of several different plant proteins. It was named after the proteins in which it was first identified: the BNM2 clone-derived protein from Brassica napus; USPs and USP-like proteins; RD22 from Arabidopsis thaliana; and PG1beta from Lycopersicon esculentum. This domain is around 230 amino acid residues long. It possesses the following conserved features: two phenylalanine residues at its N-terminus; two cysteine residues; and four repeated cysteine-histidine motifs, arranged as: CH-X(10)-CH-X(25-27)-CH-X(25-26)-CH, where X can be any amino acid. The function of this domain is unknown. Length = 216

>gnl|CDD|214992 smart01045, BURP, The BURP domain is found at the C-terminus of several different plant proteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 360
PF03181216 BURP: BURP domain; InterPro: IPR004873 The BURP do 100.0
PF10950108 DUF2775: Protein of unknown function (DUF2775); In 95.17
>PF03181 BURP: BURP domain; InterPro: IPR004873 The BURP domain is a ~230-residue module, which has been named for the four members of the group initially identified, BNM2, USP, RD22, and PG1beta Back     alignment and domain information
Probab=100.00  E-value=6e-90  Score=640.58  Aligned_cols=212  Identities=68%  Similarity=1.147  Sum_probs=205.4

Q ss_pred             ccccccCCCCCCceeeecCCCCCC--CCcccchhhccccCCCCCChHHHhhhcCCCCCCHHHHHHHHHHHHccCCCCCCc
Q 018131          143 ALFFLEKDLHPGMKMNLHFTQTSN--GATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGE  220 (360)
Q Consensus       143 ~~FF~e~dL~pG~~m~l~f~~~~~--~~~FLPR~vAdsIPFSs~kl~~iL~~FsI~~~S~~A~~m~~TL~~CE~p~~~GE  220 (360)
                      ++||+|+||++|++|+++|++..+  .++||||++||+||||+++|++||++|+|+++|+||++|++||++||.++++||
T Consensus         1 ~~fF~e~dL~~G~~m~l~f~~~~~~~~~~fLpr~~A~siPfss~~l~~iL~~Fsi~~~S~~A~~m~~Tl~~Ce~~~~~GE   80 (216)
T PF03181_consen    1 ALFFLEKDLHPGKKMPLYFPKSDNSAKRPFLPRQVADSIPFSSSKLPEILQMFSIPPGSPMAKAMKNTLEECESPPIKGE   80 (216)
T ss_pred             CcccCHHHCCCCceeeecCCCCCCCcccccCCHHHhccCCcCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhcCCCCCc
Confidence            489999999999999999998754  689999999999999999999999999999999999999999999999999999


Q ss_pred             cccccCchhhHHHHHhhhcCC-ccEEeeeeeccCCcceeeEEEeeeeeecC-CcceeeecccCCceEEeecccCceeEEE
Q 018131          221 QKYCATSLESMIDFSTSKLGK-SVQAISTEVKKGTKMQTYTIAAGVKQMAA-DKSVVCHKQNYPYAVFYCHATQTTRAYM  298 (360)
Q Consensus       221 ~K~CaTSLESMvdFa~S~LG~-nv~a~sT~~~~~~~~q~YtV~~~Vk~i~g-~k~V~CH~~~yPYaVfYCH~~~~T~~Y~  298 (360)
                      +|+||||||||+||++|+||+ |++++||++..+.+.|+|+|. +|+++.| +++|+||+|+|||+|||||.++.||+|+
T Consensus        81 ~k~CaTSLESMvdF~~s~LG~~~v~a~st~~~~~~~~~~y~V~-~v~~i~~~~~~V~CH~~~yPYaVyyCH~~~~t~~y~  159 (216)
T PF03181_consen   81 TKYCATSLESMVDFAVSKLGTRNVRALSTEVPKSTPLQNYTVE-GVKKIGGGDKSVVCHKMPYPYAVYYCHSIPPTRVYM  159 (216)
T ss_pred             CccCcCCHHHHHHHHHHhcCCCccEEEeccccCCCCCccEEEE-eeeeecCCCceEEEcccCCceeEEEeeecCceeEEE
Confidence            999999999999999999997 899999999877889999996 9999987 8999999999999999999999999999


Q ss_pred             EeeecCCCCceeEEEeeecCCCCCCCCchhhhhhccCCCCcceeeeecCCcEEEeeC
Q 018131          299 VPLEGADGTKAKAAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVWVPN  355 (360)
Q Consensus       299 V~L~g~dG~~v~AvAVCH~DTS~Wnp~H~aF~~L~vKPG~~pVCHflp~~~ivWvp~  355 (360)
                      |+|+|+||++++||||||+|||.|||+|+||++||+|||++|||||+++|+|+||||
T Consensus       160 V~l~g~dg~~~~avavCH~DTS~W~p~h~aF~~L~vkPG~~~VCHf~~~~~ivWv~~  216 (216)
T PF03181_consen  160 VPLVGEDGTKVEAVAVCHLDTSGWNPDHPAFQVLGVKPGTVPVCHFLPNDHIVWVPN  216 (216)
T ss_pred             EEEeecCCceEEEEEEEecCCCCCCcchHHHHHhCCCCCCcceEEEeeCCeEEEccC
Confidence            999999999999999999999999999999999999999999999999999999997



It is found in the C-terminal part of a number of plant cell wall proteins, which are defined not only by the BURP domain, but also by the overall similarity in their modular construction. The BURP domain proteins consists of either three or four modules: (i) an N-terminal hydrophobic domain - a presumptive transit peptide, joined to (ii) a short conserved segment or other short segment, (iii) an optional segment consisting of repeated units which is unique to each member, and (iv) the C-terminal BURP domain. Although the BURP domain proteins share primary structural features, their expression patterns and the conditions under which they are expressed differ. The presence of the conserved BURP domain in diverse plant proteins suggests an important and fundamental functional role for this domain []. It is possible that the BURP domain represents a general motif for localization of proteins within the cell wall matrix. The other structural domains associated with the BURP domain may specify other target sites for intermolecular interactions []. Some proteins known to contain a BURP domain are listed below [, , ]: Brassica protein BNM2, which is expressed during the induction of microspore embryogenesis. Field bean USPs, abundant non-storage seed proteins with unknown function. Soybean USP-like proteins ADR6 (or SALI5-4A), an auxin-repressible, aluminium-inducible protein and SALI3-2, a protein that is up-regulated by aluminium. Soybean seed coat BURP-domain protein 1 (SCB1). It might play a role in the differentiation of the seed coat parenchyma cells. Arabidopsis RD22 drought induced protein. Maize ZRP2, a protein of unknown function in cortex parenchyma. Tomato PG1beta, the beta-subunit of polygalacturonase isozyme 1 (PG1), which is expressed in ripening fruits. Cereal RAFTIN. It is essential specifically for the maturation phase of pollen development.

>PF10950 DUF2775: Protein of unknown function (DUF2775); InterPro: IPR024489 This eukaryotic family includes a number of plant organ-specific proteins Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00