Citrus Sinensis ID: 018132
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 360 | ||||||
| 255565370 | 498 | zinc finger protein, putative [Ricinus c | 0.952 | 0.688 | 0.633 | 1e-127 | |
| 147844780 | 616 | hypothetical protein VITISV_043755 [Viti | 0.880 | 0.514 | 0.646 | 1e-125 | |
| 225440244 | 438 | PREDICTED: probable S-acyltransferase At | 0.880 | 0.723 | 0.646 | 1e-125 | |
| 357509137 | 522 | Palmitoyltransferase AKR1 [Medicago trun | 0.936 | 0.645 | 0.613 | 1e-122 | |
| 356503334 | 446 | PREDICTED: probable S-acyltransferase At | 0.955 | 0.771 | 0.58 | 1e-118 | |
| 225440246 | 431 | PREDICTED: probable S-acyltransferase At | 0.861 | 0.719 | 0.625 | 1e-118 | |
| 224089877 | 444 | predicted protein [Populus trichocarpa] | 0.872 | 0.707 | 0.629 | 1e-117 | |
| 297741730 | 428 | unnamed protein product [Vitis vinifera] | 0.719 | 0.605 | 0.743 | 1e-114 | |
| 449437682 | 434 | PREDICTED: probable S-acyltransferase At | 0.780 | 0.647 | 0.690 | 1e-114 | |
| 15230173 | 477 | putative S-acyltransferase [Arabidopsis | 0.944 | 0.712 | 0.558 | 1e-110 |
| >gi|255565370|ref|XP_002523676.1| zinc finger protein, putative [Ricinus communis] gi|223537076|gb|EEF38711.1| zinc finger protein, putative [Ricinus communis] | Back alignment and taxonomy information |
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Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 223/352 (63%), Positives = 273/352 (77%), Gaps = 9/352 (2%)
Query: 1 MVPRNSKPPESDDAFDMATPSMEWVNGRTPHLKLPRTKDVIINGHTVKVKYCDTCMLYRP 60
+V RNS+PPESD+A ++ATPSMEWVNGRTPHLKLPRTKDV++NGHTVKVKYCDTC+LYRP
Sbjct: 108 IVSRNSRPPESDEALEIATPSMEWVNGRTPHLKLPRTKDVMVNGHTVKVKYCDTCLLYRP 167
Query: 61 PRASHCSICNNCVQRFDHHCPWVGQCIGIRNYRFFYMFILTSTILCVYVFAFSWVNILEK 120
PRASHCSICNNCVQRFDHHCPWVGQCIGIRNYRFF+MFI T+TILC+YVF FSW++IL +
Sbjct: 168 PRASHCSICNNCVQRFDHHCPWVGQCIGIRNYRFFFMFISTATILCIYVFVFSWIHILSR 227
Query: 121 DHNIWKAMSEDVPSVILMVYCFIAVWFVGGLSVFHFYLICTNQTTYENFRYRYDKKENPY 180
+ WKA++ ++ S L+VYCFIAVWFVGGL++FH YLICTNQTTYENFRYRYDKKENPY
Sbjct: 228 KEHTWKAITHNILSDFLIVYCFIAVWFVGGLTIFHSYLICTNQTTYENFRYRYDKKENPY 287
Query: 181 NNGMLRNLGEVFFSKIPPSMNNFRSFVEEDEHMVIGSLTPNFGEGTAAGSKEKIDIEMGS 240
N GM+RN+ E+FF+KIPPSMN FRSF+EEDE+MV + P+ G+G SKEKIDIEMG+
Sbjct: 288 NKGMIRNVIEIFFTKIPPSMNKFRSFIEEDENMVATPVLPSLGDGFVR-SKEKIDIEMGA 346
Query: 241 KHAEDTGYSLPEILQNL---DFDNLEDSLKIKEERGIPGFDPFFPVEQDEKDSVQVCIVG 297
E+ YSLPEIL+NL D D+ +D K +E+ +P DPF EQ K +Q+ +VG
Sbjct: 347 MLTEERNYSLPEILRNLDYDDDDDSDDKSKTREQEEMPSSDPFLRGEQVPKPLLQISVVG 406
Query: 298 DGAAEYLQDQIIGDGVRDSKASSDIDEVREPVQSSTGGNEANAVDKPDNVSD 349
D + +Q I + V++S SS RE V+ ST G+ D V +
Sbjct: 407 DELRDSVQGLDIRNEVQESSLSS-----RESVECSTAGDGVKNSSTEDEVRE 453
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147844780|emb|CAN79042.1| hypothetical protein VITISV_043755 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|225440244|ref|XP_002283906.1| PREDICTED: probable S-acyltransferase At5g05070-like isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|357509137|ref|XP_003624857.1| Palmitoyltransferase AKR1 [Medicago truncatula] gi|355499872|gb|AES81075.1| Palmitoyltransferase AKR1 [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|356503334|ref|XP_003520465.1| PREDICTED: probable S-acyltransferase At3g56930-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|225440246|ref|XP_002283910.1| PREDICTED: probable S-acyltransferase At5g05070-like isoform 2 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|224089877|ref|XP_002308847.1| predicted protein [Populus trichocarpa] gi|222854823|gb|EEE92370.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|297741730|emb|CBI32862.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|449437682|ref|XP_004136620.1| PREDICTED: probable S-acyltransferase At3g56930-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|15230173|ref|NP_191252.1| putative S-acyltransferase [Arabidopsis thaliana] gi|75264563|sp|Q9M1K5.1|ZDH13_ARATH RecName: Full=Probable S-acyltransferase At3g56930; AltName: Full=Probable palmitoyltransferase At3g56930; AltName: Full=Zinc finger DHHC domain-containing protein At3g56930 gi|6911863|emb|CAB72163.1| putative protein [Arabidopsis thaliana] gi|26450403|dbj|BAC42316.1| unknown protein [Arabidopsis thaliana] gi|30793815|gb|AAP40360.1| unknown protein [Arabidopsis thaliana] gi|332646066|gb|AEE79587.1| putative S-acyltransferase [Arabidopsis thaliana] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 360 | ||||||
| TAIR|locus:2080555 | 477 | AT3G56930 [Arabidopsis thalian | 0.730 | 0.551 | 0.699 | 9e-111 | |
| TAIR|locus:2175349 | 413 | AT5G05070 "AT5G05070" [Arabido | 0.780 | 0.680 | 0.559 | 4.7e-87 | |
| TAIR|locus:2063172 | 411 | AT2G40990 [Arabidopsis thalian | 0.75 | 0.656 | 0.541 | 5.6e-84 | |
| TAIR|locus:2091960 | 443 | AT3G26935 "AT3G26935" [Arabido | 0.638 | 0.519 | 0.572 | 4.3e-77 | |
| TAIR|locus:2103650 | 338 | AT3G56920 [Arabidopsis thalian | 0.655 | 0.698 | 0.570 | 2.4e-76 | |
| TAIR|locus:2099483 | 476 | AT3G48760 [Arabidopsis thalian | 0.652 | 0.493 | 0.538 | 5.2e-75 | |
| TAIR|locus:2121949 | 407 | AT4G24630 [Arabidopsis thalian | 0.652 | 0.577 | 0.557 | 6.7e-72 | |
| TAIR|locus:2163001 | 410 | AT5G41060 [Arabidopsis thalian | 0.633 | 0.556 | 0.56 | 2.4e-69 | |
| UNIPROTKB|Q8IZN3 | 488 | ZDHHC14 "Probable palmitoyltra | 0.55 | 0.405 | 0.454 | 1.1e-48 | |
| UNIPROTKB|E1BK60 | 488 | ZDHHC14 "Uncharacterized prote | 0.613 | 0.452 | 0.421 | 1.4e-46 |
| TAIR|locus:2080555 AT3G56930 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1061 (378.5 bits), Expect = 9.0e-111, Sum P(2) = 9.0e-111
Identities = 191/273 (69%), Positives = 234/273 (85%)
Query: 1 MVPRNSKPPESDDAFDMATPSMEWVNGRTPHLKLPRTKDVIINGHTVKVKYCDTCMLYRP 60
+VPR+ +PPE+DDA D TPSMEWV+GRTP++++PR KDV +NGHTVKVK+CDTC+LYRP
Sbjct: 97 IVPRSFRPPETDDAPDSTTPSMEWVSGRTPNIRIPRVKDVTVNGHTVKVKFCDTCLLYRP 156
Query: 61 PRASHCSICNNCVQRFDHHCPWVGQCIGIRNYRFFYMFILTSTILCVYVFAFSWVNILEK 120
PRASHCSICNNCVQRFDHHCPWVGQCIG+RNYRFF+MFI TST LC+YVFAFSW+NI ++
Sbjct: 157 PRASHCSICNNCVQRFDHHCPWVGQCIGVRNYRFFFMFISTSTTLCIYVFAFSWLNIFQR 216
Query: 121 --DH--NIWKAMSEDVPSVILMVYCFIAVWFVGGLSVFHFYLICTNQTTYENFRYRYDKK 176
D +IWKA+S+DV S IL+VYCFI VWFVGGL++FH YLICTNQTTYENFRYRYDKK
Sbjct: 217 HMDEKISIWKAISKDVLSDILIVYCFITVWFVGGLTIFHSYLICTNQTTYENFRYRYDKK 276
Query: 177 ENPYNNGMLRNLGEVFFSKIPPSMNNFRSFVEEDEHMVIGSLTP--NFGEGTAAGSKEKI 234
ENPYN G+L N+ E+F SKIPPSMN FRSFV+E+++M++ TP N GE + SKEKI
Sbjct: 277 ENPYNKGILGNIWEIFLSKIPPSMNKFRSFVKEEDYMMMMVETPTSNLGESLVS-SKEKI 335
Query: 235 DIEMGS-KHAEDTG--YSLPEILQNLDFDNLED 264
DIEMG + +++G YSLPEIL+NL++++LED
Sbjct: 336 DIEMGGGRIVDESGKSYSLPEILRNLNYEDLED 368
|
|
| TAIR|locus:2175349 AT5G05070 "AT5G05070" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2063172 AT2G40990 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2091960 AT3G26935 "AT3G26935" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2103650 AT3G56920 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2099483 AT3G48760 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2121949 AT4G24630 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2163001 AT5G41060 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q8IZN3 ZDHHC14 "Probable palmitoyltransferase ZDHHC14" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E1BK60 ZDHHC14 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00023348001 | SubName- Full=Chromosome chr8 scaffold_29, whole genome shotgun sequence; (430 aa) | |||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 360 | |||
| pfam01529 | 167 | pfam01529, zf-DHHC, DHHC palmitoyltransferase | 4e-47 | |
| COG5273 | 309 | COG5273, COG5273, Uncharacterized protein containi | 5e-31 |
| >gnl|CDD|216554 pfam01529, zf-DHHC, DHHC palmitoyltransferase | Back alignment and domain information |
|---|
Score = 157 bits (398), Expect = 4e-47
Identities = 48/137 (35%), Positives = 76/137 (55%), Gaps = 3/137 (2%)
Query: 39 DVIINGHTVKVKYCDTCMLYRPPRASHCSICNNCVQRFDHHCPWVGQCIGIRNYRFFYMF 98
+ ++K+C TC + +PPR+ HC +CN CV RFDHHCPW+ CIG RN+++F +F
Sbjct: 31 ESEEGDEEDELKFCSTCNIIKPPRSHHCRVCNRCVLRFDHHCPWLNNCIGRRNHKYFLLF 90
Query: 99 ILTSTILCVYVFAFSW---VNILEKDHNIWKAMSEDVPSVILMVYCFIAVWFVGGLSVFH 155
+L T+ + + S+ V ++ + + S+IL+V + F+ L FH
Sbjct: 91 LLYLTLYLILLLVLSFYYLVYLIRNIELFFFLILSLFSSIILLVLSLFFLLFLSFLLFFH 150
Query: 156 FYLICTNQTTYENFRYR 172
YLI N TTYE + +
Sbjct: 151 LYLILKNITTYEYIKKK 167
|
This family includes the well known DHHC zinc binding domain as well as three of the four conserved transmembrane regions found in this family of palmitoyltransferase enzymes. Length = 167 |
| >gnl|CDD|227598 COG5273, COG5273, Uncharacterized protein containing DHHC-type Zn finger [General function prediction only] | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 360 | |||
| KOG1311 | 299 | consensus DHHC-type Zn-finger proteins [General fu | 100.0 | |
| KOG1315 | 307 | consensus Predicted DHHC-type Zn-finger protein [G | 100.0 | |
| PF01529 | 174 | zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR0 | 100.0 | |
| KOG1313 | 309 | consensus DHHC-type Zn-finger proteins [General fu | 100.0 | |
| COG5273 | 309 | Uncharacterized protein containing DHHC-type Zn fi | 99.97 | |
| KOG1314 | 414 | consensus DHHC-type Zn-finger protein [General fun | 99.96 | |
| KOG1312 | 341 | consensus DHHC-type Zn-finger proteins [General fu | 99.93 | |
| KOG0509 | 600 | consensus Ankyrin repeat and DHHC-type Zn-finger d | 99.9 | |
| PF01529 | 174 | zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR0 | 95.72 | |
| COG5273 | 309 | Uncharacterized protein containing DHHC-type Zn fi | 95.59 | |
| KOG1311 | 299 | consensus DHHC-type Zn-finger proteins [General fu | 94.05 | |
| KOG0509 | 600 | consensus Ankyrin repeat and DHHC-type Zn-finger d | 86.5 | |
| KOG1315 | 307 | consensus Predicted DHHC-type Zn-finger protein [G | 83.89 | |
| KOG1314 | 414 | consensus DHHC-type Zn-finger protein [General fun | 82.19 |
| >KOG1311 consensus DHHC-type Zn-finger proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-44 Score=346.63 Aligned_cols=175 Identities=42% Similarity=0.803 Sum_probs=149.4
Q ss_pred CCCCccceeecCeeeceeecCCCCcccCCCCcCCCCCCcccccCCccCcccccccccchhHHHHHHHHHHHHHHHHHHHH
Q 018132 33 KLPRTKDVIINGHTVKVKYCDTCMLYRPPRASHCSICNNCVQRFDHHCPWVGQCIGIRNYRFFYMFILTSTILCVYVFAF 112 (360)
Q Consensus 33 ~~Prtk~v~vng~~v~~KyC~tC~i~RPpRs~HCsvC~rCV~rfDHHCpWvgnCIG~rNyR~F~lFL~~~tll~iy~~~~ 112 (360)
+.++.+++.++|+.++.|||.+|+.+||||||||++||+||+||||||||+|||||+||||||++|+++++++++|.+++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~C~~C~~~rPpRs~HCsvC~~CV~rfDHHC~WvnnCVG~rNyr~F~~f~~~~~l~~i~~~~~ 176 (299)
T KOG1311|consen 97 RAPLYKNVDVNGIQVEWKYCDTCQLYRPPRSSHCSVCNNCVLRFDHHCPWLNNCIGERNYRYFVLFLFYLALGVLLALAF 176 (299)
T ss_pred ccccCCCcccCCcccceEEcCcCcccCCCCcccchhhcccccccCCCCCCccceECCCchHHHHHHHHHHHHHHHHHHHH
Confidence 57788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcchh----hH--hhhccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcceeeeee-eccCCCCCCCCHHHH
Q 018132 113 SWVNILEKDHN----IW--KAMSEDVPSVILMVYCFIAVWFVGGLSVFHFYLICTNQTTYENFR-YRYDKKENPYNNGML 185 (360)
Q Consensus 113 s~~~il~~~~~----~~--~~~~~~~~~i~liv~~fl~~~fvg~L~~fHlyLI~~N~TT~E~lr-~~~~kk~NPyd~G~~ 185 (360)
+++.+...... .+ .........++++++++++++++++|+.+|+++|++|+||+|+++ ++..++.++|++|.+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~fh~~li~~~~Tt~e~~~~~~~~~~~~~~~~g~~ 256 (299)
T KOG1311|consen 177 LFYELLQRADNLKVNLTPVLIPAGTFLSALLGLLSALFLAFTSALLCFHIYLIKSGSTTYESIKSLDFVSRSNPYDLGLL 256 (299)
T ss_pred HHHHHHHhcccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhheeeEecCcchhhhhhccccccccCCCchhHH
Confidence 88886643211 22 122223345566678888889999999999999999999999988 344444699999999
Q ss_pred HHHHHhcCCCCCCCccccCccc
Q 018132 186 RNLGEVFFSKIPPSMNNFRSFV 207 (360)
Q Consensus 186 ~Nl~eVFg~~~pps~~~fr~~v 207 (360)
+|++++||.+.++++.......
T Consensus 257 ~n~~~~~~~~~~~~~~~p~~~~ 278 (299)
T KOG1311|consen 257 KNLQEVFGGPLPLSWLSPFARS 278 (299)
T ss_pred HHHHHHhCCCCCcccccccccC
Confidence 9999999999998877766543
|
|
| >KOG1315 consensus Predicted DHHC-type Zn-finger protein [General function prediction only] | Back alignment and domain information |
|---|
| >PF01529 zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR001594 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule | Back alignment and domain information |
|---|
| >KOG1313 consensus DHHC-type Zn-finger proteins [General function prediction only] | Back alignment and domain information |
|---|
| >COG5273 Uncharacterized protein containing DHHC-type Zn finger [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1314 consensus DHHC-type Zn-finger protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1312 consensus DHHC-type Zn-finger proteins [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only] | Back alignment and domain information |
|---|
| >PF01529 zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR001594 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule | Back alignment and domain information |
|---|
| >COG5273 Uncharacterized protein containing DHHC-type Zn finger [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1311 consensus DHHC-type Zn-finger proteins [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1315 consensus Predicted DHHC-type Zn-finger protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1314 consensus DHHC-type Zn-finger protein [General function prediction only] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00