Citrus Sinensis ID: 018134


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360
MEPPKGFLASLWSFICFLPYFIGLLLLGIIKGIIFCPVICLMMTIGNSAIILGLLPAHVLWTYYCILRAKQLGPVLKLLTCICIPVFLILWPVVSIGASIIGGALYGFLSPIFATFDAVGEGKTNDIFHCFYDGTWSTIKHSFTIVRDFKDVCFHSYFSLMDDLRQKQAPDGKYYEIRLLYIPGAIIAGGLGVLIDVPVISVVALCKSPYMLFKGWHRLFHDLIGREGPFLETICVPLAGLAIILWPLAVVGAVLGSMVTSIFLGAYAGVVVYQESSLWFGLRYIIAALSIYDEYSNDILDMPEGSCFPRPQYRKKADLSRTSTFSRPSSFKDPPSRTSSLRKPIDLKPLEVSCAIFHFA
ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccccEEEHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEcccccEEccEEEEEEcccccccccHHHHHHHHHcccccccEEEEEEEcccHHHHHHHHcEEEcHHHEEEEEHHcccHHHHHcHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcEEEEEEEccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccc
cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHEEEEEccHHHHEEEHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEccccccEcccEEEEEcHHHHHHccHHHHHHHHHHccccccccEEEEEEEccHHHHHEEEEEEEcHHHHHHHHHHHcHHHHHHHHHHHHHHHHccccccEHHEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcc
meppkgflASLWSFICFLPYFIGLLLLGIIKGIIFCPVICLMMTIGNSAIILGLLPAHVLWTYYCILRAKQLGPVLKLLTCICIPVFLILWPVVSIGASIiggalygflspifatfdavgegktndifhcfydgtwstikhsfTIVRDFKDVCFHSYFSLMDDlrqkqapdgkyYEIRLLYIpgaiiagglgvliDVPVISVVALCKSPYMLFKGWHRLFHDLigregpfleTICVPLAGLAIILWPLAVVGAVLGSMVTSIFLGAYAGVVVYQESSLWFGLRYIIAALSIYdeysndildmpegscfprpqyrkkadlsrtstfsrpssfkdppsrtsslrkpidlkplevscaIFHFA
MEPPKGFLASLWSFICFLPYFIGLLLLGIIKGIIFCPVICLMMTIGNSAIILGLLPAHVLWTYYCILRAKQLGPVLKLLTCICIPVFLILWPVVSIGASIIGGALYGFLSPIFATFDAVGEGKTNDIFHCFYDGTWSTIKHSFTIVRDFKDVCFHSYFSLMDDLRQKQAPDGKYYEIRLLYIPGAIIAGGLGVLIDVPVISVVALCKSPYMLFKGWHRLFHDLIGREGPFLETICVPLAGLAIILWPLAVVGAVLGSMVTSIFLGAYAGVVVYQESSLWFGLRYIIAALSIYDEYSNDILDMPEGSCFPRPQYRKKadlsrtstfsrpssfkdppsrtsslrkpidlkpleVSCAIFHFA
MEPPKGFLASLWSFICFLPYFigllllgiikgiiFCPVICLMMTIGNSAIILGLLPAHVLWTYYCILRAKQLGPVLKLLTCICIPVFLILWPVVSIGASIIGGALYGFLSPIFATFDAVGEGKTNDIFHCFYDGTWSTIKHSFTIVRDFKDVCFHSYFSLMDDLRQKQAPDGKYYEIRllyipgaiiagglgvliDVPVISVVALCKSPYMLFKGWHRLFHDLIGREGPFLETICVPLAGLAIILWPLAVVGAVLGSMVTSIFLGAYAGVVVYQESSLWFGLRYIIAALSIYDEYSNDILDMPEGSCFPRPQYRKKADLsrtstfsrpssfKDPPSRTSSLRKPIDLKPLEVSCAIFHFA
******FLASLWSFICFLPYFIGLLLLGIIKGIIFCPVICLMMTIGNSAIILGLLPAHVLWTYYCILRAKQLGPVLKLLTCICIPVFLILWPVVSIGASIIGGALYGFLSPIFATFDAVGEGKTNDIFHCFYDGTWSTIKHSFTIVRDFKDVCFHSYFSLMDDLRQKQAPDGKYYEIRLLYIPGAIIAGGLGVLIDVPVISVVALCKSPYMLFKGWHRLFHDLIGREGPFLETICVPLAGLAIILWPLAVVGAVLGSMVTSIFLGAYAGVVVYQESSLWFGLRYIIAALSIYDEYSNDILDMP**********************************************LEVSCAIFH**
***PKGFLASLWSFICFLPYFIGLLLLGIIKGIIFCPVICLMMTIGNSAIILGLLPAHVLWTYYCILRAKQLGPVLKLLTCICIPVFLILWPVVSIGASIIGGALYGFLSPIFATFDAVGEGKTNDIFHCFYDGTWSTIKHSFTIVRDFKDVCFHSYFSLMDDL*********YYEIRLLYIPGAIIAGGLGVLIDVPVISVVALCKSPYMLFKGWHRLFHDLIGREGPFLETICVPLAGLAIILWPLAVVGAVLGSMVTSIFLGAYAGVVVYQESSLWFGLRYIIAALSIYDEYSNDILDMPEGSCFPR*************************************KPLEVSCAIFHFA
MEPPKGFLASLWSFICFLPYFIGLLLLGIIKGIIFCPVICLMMTIGNSAIILGLLPAHVLWTYYCILRAKQLGPVLKLLTCICIPVFLILWPVVSIGASIIGGALYGFLSPIFATFDAVGEGKTNDIFHCFYDGTWSTIKHSFTIVRDFKDVCFHSYFSLMDDLRQKQAPDGKYYEIRLLYIPGAIIAGGLGVLIDVPVISVVALCKSPYMLFKGWHRLFHDLIGREGPFLETICVPLAGLAIILWPLAVVGAVLGSMVTSIFLGAYAGVVVYQESSLWFGLRYIIAALSIYDEYSNDILDMPEGSCFPRPQYR**************************LRKPIDLKPLEVSCAIFHFA
*EPPKGFLASLWSFICFLPYFIGLLLLGIIKGIIFCPVICLMMTIGNSAIILGLLPAHVLWTYYCILRAKQLGPVLKLLTCICIPVFLILWPVVSIGASIIGGALYGFLSPIFATFDAVGEGKTNDIFHCFYDGTWSTIKHSFTIVRDFKDVCFHSYFSLMDDLRQKQAPDGKYYEIRLLYIPGAIIAGGLGVLIDVPVISVVALCKSPYMLFKGWHRLFHDLIGREGPFLETICVPLAGLAIILWPLAVVGAVLGSMVTSIFLGAYAGVVVYQESSLWFGLRYIIAALSIYDEYSNDILDMPEGSCFPRPQY******************************PIDLKPLEVSCAIFHFA
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MEPPKGFLASLWSFICFLPYFIGLLLLGIIKGIIFCPVICLMMTIGNSAIILGLLPAHVLWTYYCILRAKQLGPVLKLLTCICIPVFLILWPVVSIGASIIGGALYGFLSPIFATFDAVGEGKTNDIFHCFYDGTWSTIKHSFTIVRDFKDVCFHSYFSLMDDLRQKQAPDGKYYEIRLLYIPGAIIAGGLGVLIDVPVISVVALCKSPYMLFKGWHRLFHDLIGREGPFLETICVPLAGLAIILWPLAVVGAVLGSMVTSIFLGAYAGVVVYQESSLWFGLRYIIAALSIYDEYSNDILDMPEGSCFPRPQYRKKADLSRTSTFSRPSSFKDPPSRTSSLRKPIDLKPLEVSCAIFHFA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query360 2.2.26 [Sep-21-2011]
Q8GUM4 588 Uncharacterized membrane no no 0.983 0.602 0.677 1e-144
>sp|Q8GUM4|Y3739_ARATH Uncharacterized membrane protein At3g27390 OS=Arabidopsis thaliana GN=At3g27390 PE=1 SV=2 Back     alignment and function desciption
 Score =  511 bits (1317), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 246/363 (67%), Positives = 302/363 (83%), Gaps = 9/363 (2%)

Query: 1   MEPPKGFLASLWSFICFLPYFIGLLLLGIIKGIIFCPVICLMMTIGNSAIILGLLPAHVL 60
           MEPP GF ASL+ F+ FLPYFIGLL LG IKGI+ CP++CL++TIGNSA+IL LLP H++
Sbjct: 1   MEPPIGFRASLFQFLLFLPYFIGLLFLGFIKGIVLCPLVCLVVTIGNSAVILSLLPVHIV 60

Query: 61  WTYYCILRAKQLGPVLKLLTCICIPVFLILWPVVSIGASIIGGALYGFLSPIFATFDAVG 120
           WT+Y I+ AKQ+GP+LK+  C+C+P  +ILWP+V I  S++GGALYGF SPIFATFDAVG
Sbjct: 61  WTFYSIVSAKQVGPILKIFLCLCLPAAIILWPIVGILGSVLGGALYGFFSPIFATFDAVG 120

Query: 121 EGKTNDIFHCFYDGTWSTIKHSFTIVRDFKDVCFHSYFSLMDDLRQKQAPDGKYYEIRLL 180
           EGK    FHCFYDGTWST++ SFT+VRDFKDVCFHSYFSLMD+L+Q   PD KYYEIRLL
Sbjct: 121 EGKPYQFFHCFYDGTWSTMQRSFTVVRDFKDVCFHSYFSLMDELKQ-SCPDRKYYEIRLL 179

Query: 181 YIPGAIIAGGLGVLIDVPVISVVALCKSPYMLFKGWHRLFHDLIGREGPFLETICVPLAG 240
            +PGA++   LG+L+D PVIS+VA+CKSPYMLFKGWHRLFHDLIGREGPFLET+CVP+AG
Sbjct: 180 QLPGALVVSVLGILVDPPVISLVAICKSPYMLFKGWHRLFHDLIGREGPFLETMCVPIAG 239

Query: 241 LAIILWPLAVVGAVLGSMVTSIFLGAYAGVVVYQESSLWFGLRYIIAALSIYDEYSNDIL 300
           LAI+LWPLAV GAV+GS+++SIFLGAYAGVV YQESS ++GL YI+A++SIYDEYS DIL
Sbjct: 240 LAILLWPLAVTGAVIGSVISSIFLGAYAGVVSYQESSFYYGLCYIVASVSIYDEYSTDIL 299

Query: 301 DMPEGSCFPRPQYRKKADLSRTSTFSRP----SSFKDPPS-RTSSLRKP-IDLKPLEVSC 354
           D+PEGSCFPRP+YR+K +    + FS P     S K+  S R  S+R P ID+KPL++  
Sbjct: 300 DLPEGSCFPRPKYRRKDE--EPTPFSGPVPRLGSVKNASSMRGGSVRVPMIDIKPLDLLN 357

Query: 355 AIF 357
            +F
Sbjct: 358 ELF 360





Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query360
297805610 586 hypothetical protein ARALYDRAFT_493918 [ 0.988 0.607 0.722 1e-150
224055641 586 predicted protein [Populus trichocarpa] 0.986 0.605 0.718 1e-148
255572012 582 conserved hypothetical protein [Ricinus 0.986 0.609 0.720 1e-148
30693640 586 uncharacterized protein [Arabidopsis tha 0.988 0.607 0.706 1e-147
9758091 595 unnamed protein product [Arabidopsis tha 0.975 0.589 0.713 1e-147
30688768 588 uncharacterized protein [Arabidopsis tha 0.983 0.602 0.677 1e-142
27311557 588 Unknown protein [Arabidopsis thaliana] 0.983 0.602 0.677 1e-142
356571451 580 PREDICTED: uncharacterized membrane prot 0.994 0.617 0.687 1e-141
356558791 580 PREDICTED: uncharacterized membrane prot 0.994 0.617 0.671 1e-140
225452236 584 PREDICTED: uncharacterized membrane prot 0.994 0.613 0.716 1e-140
>gi|297805610|ref|XP_002870689.1| hypothetical protein ARALYDRAFT_493918 [Arabidopsis lyrata subsp. lyrata] gi|297316525|gb|EFH46948.1| hypothetical protein ARALYDRAFT_493918 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
 Score =  536 bits (1381), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 261/361 (72%), Positives = 304/361 (84%), Gaps = 5/361 (1%)

Query: 1   MEPPKGFLASLWSFICFLPYFIGLLLLGIIKGIIFCPVICLMMTIGNSAIILGLLPAHVL 60
           MEPP G LASLW FI F+PYF GLLLLG+IKGIIFCP+ICL++ IGNSAIILGLLP H +
Sbjct: 1   MEPPTGILASLWQFILFIPYFTGLLLLGVIKGIIFCPLICLIVAIGNSAIILGLLPVHAI 60

Query: 61  WTYYCILRAKQLGPVLKLLTCICIPVFLILWPVVSIGASIIGGALYGFLSPIFATFDAVG 120
           WT Y I  AKQLGP+LK+  C+C+P+ +ILW VVSI  SI+GGALYGFLSPIFATFDAVG
Sbjct: 61  WTLYSIASAKQLGPILKIFLCLCVPLGVILWLVVSIVGSILGGALYGFLSPIFATFDAVG 120

Query: 121 EGKTNDIFHCFYDGTWSTIKHSFTIVRDFKDVCFHSYFSLMDDLRQKQAPDGKYYEIRLL 180
           EGK+N  FHCFYDGTWST++ SFT+V DFKDVCFHSYFS MDDLR   A D  YYEIRLL
Sbjct: 121 EGKSNPFFHCFYDGTWSTVQGSFTVVCDFKDVCFHSYFSFMDDLRTPSA-DRHYYEIRLL 179

Query: 181 YIPGAIIAGGLGVLIDVPVISVVALCKSPYMLFKGWHRLFHDLIGREGPFLETICVPLAG 240
            IPGA+I   LG+L+D PVIS++ALCKSPYMLFKGWHRLFHDLIGREGPFLET+CVP+AG
Sbjct: 180 QIPGAVIVAVLGILVDFPVISLLALCKSPYMLFKGWHRLFHDLIGREGPFLETMCVPIAG 239

Query: 241 LAIILWPLAVVGAVLGSMVTSIFLGAYAGVVVYQESSLWFGLRYIIAALSIYDEYSNDIL 300
           L I+LWPLAVVGAVLGSMV+S+FLGAY GVV YQESS +FGL Y++A++SIYDEYSND+L
Sbjct: 240 LVILLWPLAVVGAVLGSMVSSVFLGAYGGVVSYQESSFFFGLCYVVASVSIYDEYSNDVL 299

Query: 301 DMPEGSCFPRPQYRKKADLSRTS---TFSRPSSFKDPPSRTSSLRKP-IDLKPLEVSCAI 356
           DMPEGSCFPRP YR+  +++ T+     SRP+SFK  PSR  S + P IDLKPL++  A+
Sbjct: 300 DMPEGSCFPRPIYRRNEEVASTTLSGGLSRPNSFKTTPSRGGSNKGPMIDLKPLDLLEAL 359

Query: 357 F 357
           F
Sbjct: 360 F 360




Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224055641|ref|XP_002298580.1| predicted protein [Populus trichocarpa] gi|222845838|gb|EEE83385.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255572012|ref|XP_002526947.1| conserved hypothetical protein [Ricinus communis] gi|223533699|gb|EEF35434.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|30693640|ref|NP_198880.2| uncharacterized protein [Arabidopsis thaliana] gi|28393245|gb|AAO42051.1| unknown protein [Arabidopsis thaliana] gi|28827666|gb|AAO50677.1| unknown protein [Arabidopsis thaliana] gi|332007193|gb|AED94576.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|9758091|dbj|BAB08535.1| unnamed protein product [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|30688768|ref|NP_189375.2| uncharacterized protein [Arabidopsis thaliana] gi|332278120|sp|Q8GUM4.2|Y3739_ARATH RecName: Full=Uncharacterized membrane protein At3g27390 gi|332643790|gb|AEE77311.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|27311557|gb|AAO00744.1| Unknown protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356571451|ref|XP_003553890.1| PREDICTED: uncharacterized membrane protein At3g27390-like [Glycine max] Back     alignment and taxonomy information
>gi|356558791|ref|XP_003547686.1| PREDICTED: uncharacterized membrane protein At3g27390-like [Glycine max] Back     alignment and taxonomy information
>gi|225452236|ref|XP_002268688.1| PREDICTED: uncharacterized membrane protein At3g27390 [Vitis vinifera] gi|296081327|emb|CBI17709.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query360
TAIR|locus:2168803 586 AT5G40640 [Arabidopsis thalian 0.988 0.607 0.637 1.7e-123
TAIR|locus:2086726 588 AT3G27390 "AT3G27390" [Arabido 0.988 0.605 0.620 9.2e-123
TAIR|locus:2135748 575 AT4G12680 "AT4G12680" [Arabido 0.944 0.591 0.497 1.1e-89
TAIR|locus:2114960 569 AT4G37030 "AT4G37030" [Arabido 0.769 0.486 0.401 1.7e-59
TAIR|locus:2168803 AT5G40640 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1214 (432.4 bits), Expect = 1.7e-123, P = 1.7e-123
 Identities = 230/361 (63%), Positives = 267/361 (73%)

Query:     1 MEPPKGFLASLWSFICFLPYFXXXXXXXXXXXXXFCPVICLMMTIGNSAIILGLLPAHVL 60
             MEPP G LASLW FI F+PYF              CP+ICL + IGNSAIILGLLP H +
Sbjct:     1 MEPPTGILASLWQFILFIPYFTGLLLLGVIKGIVLCPLICLTVAIGNSAIILGLLPVHAI 60

Query:    61 WTYYCILRAKQLGPVLKLLTCICIPVFLILWPVVSIGASIIGGALYGFLSPIFATFDAVG 120
             WT Y I  AKQLGP+LK+  C+C+P+ +ILW VVSI  S++GGA+YGFLSPIFATFDAVG
Sbjct:    61 WTLYSIASAKQLGPILKIFLCLCVPLGVILWLVVSILGSVLGGAIYGFLSPIFATFDAVG 120

Query:   121 EGKTNDIFHCFYDGTWSTIKHSFTIVRDFKDVCFHSYFSLMDDLRQKQAPDGKYYEIRXX 180
             EGK+N  FHCFYDGTWST++ SFT+V DFKDVCFHSYFS MDDLR   A +  YYEIR  
Sbjct:   121 EGKSNPFFHCFYDGTWSTVQGSFTVVCDFKDVCFHSYFSFMDDLRTSTA-NRHYYEIRLL 179

Query:   181 XXXXXXXXXXXXXXXDVPVISVVALCKSPYMLFKGWHRLFHDLIGREGPFLETICVPLAG 240
                            D PVIS++ALCKSPYMLFKGWHRLFHDLIGREGPFLET+CVP+AG
Sbjct:   180 QIPGAVIVAVLGILVDFPVISLLALCKSPYMLFKGWHRLFHDLIGREGPFLETMCVPIAG 239

Query:   241 LAIILWPLAVVGAVLGSMVTSIFLGAYAGVVVYQESSLWFGLRYIIAALSIYDEYSNDIL 300
             L I+LWPLAVVGAVLGS+V+S+FLGAY GVV YQESS +FGL Y++A++SIYDEYSND+L
Sbjct:   240 LVILLWPLAVVGAVLGSVVSSVFLGAYGGVVSYQESSFFFGLCYVVASVSIYDEYSNDVL 299

Query:   301 DMPEGSCFPRPQYRKK---ADLXXXXXXXXXXXXKDPPSRTSSLRKP-IDLKPLEVSCAI 356
             DMPEGSCFPRP YR+    A              K  PSR  S + P IDLKPL++  A+
Sbjct:   300 DMPEGSCFPRPIYRRNEEGASTAFSGGLSRPNSFKTTPSRGGSNKGPMIDLKPLDLLEAL 359

Query:   357 F 357
             F
Sbjct:   360 F 360




GO:0009507 "chloroplast" evidence=ISM
GO:0005886 "plasma membrane" evidence=IDA
TAIR|locus:2086726 AT3G27390 "AT3G27390" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2135748 AT4G12680 "AT4G12680" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2114960 AT4G37030 "AT4G37030" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
fgenesh2_kg.7__3351__AT5G40640.1
annotation not avaliable (586 aa)
(Arabidopsis lyrata)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Conserved Domains Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00