Citrus Sinensis ID: 018134
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 360 | ||||||
| 297805610 | 586 | hypothetical protein ARALYDRAFT_493918 [ | 0.988 | 0.607 | 0.722 | 1e-150 | |
| 224055641 | 586 | predicted protein [Populus trichocarpa] | 0.986 | 0.605 | 0.718 | 1e-148 | |
| 255572012 | 582 | conserved hypothetical protein [Ricinus | 0.986 | 0.609 | 0.720 | 1e-148 | |
| 30693640 | 586 | uncharacterized protein [Arabidopsis tha | 0.988 | 0.607 | 0.706 | 1e-147 | |
| 9758091 | 595 | unnamed protein product [Arabidopsis tha | 0.975 | 0.589 | 0.713 | 1e-147 | |
| 30688768 | 588 | uncharacterized protein [Arabidopsis tha | 0.983 | 0.602 | 0.677 | 1e-142 | |
| 27311557 | 588 | Unknown protein [Arabidopsis thaliana] | 0.983 | 0.602 | 0.677 | 1e-142 | |
| 356571451 | 580 | PREDICTED: uncharacterized membrane prot | 0.994 | 0.617 | 0.687 | 1e-141 | |
| 356558791 | 580 | PREDICTED: uncharacterized membrane prot | 0.994 | 0.617 | 0.671 | 1e-140 | |
| 225452236 | 584 | PREDICTED: uncharacterized membrane prot | 0.994 | 0.613 | 0.716 | 1e-140 |
| >gi|297805610|ref|XP_002870689.1| hypothetical protein ARALYDRAFT_493918 [Arabidopsis lyrata subsp. lyrata] gi|297316525|gb|EFH46948.1| hypothetical protein ARALYDRAFT_493918 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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Score = 536 bits (1381), Expect = e-150, Method: Compositional matrix adjust.
Identities = 261/361 (72%), Positives = 304/361 (84%), Gaps = 5/361 (1%)
Query: 1 MEPPKGFLASLWSFICFLPYFIGLLLLGIIKGIIFCPVICLMMTIGNSAIILGLLPAHVL 60
MEPP G LASLW FI F+PYF GLLLLG+IKGIIFCP+ICL++ IGNSAIILGLLP H +
Sbjct: 1 MEPPTGILASLWQFILFIPYFTGLLLLGVIKGIIFCPLICLIVAIGNSAIILGLLPVHAI 60
Query: 61 WTYYCILRAKQLGPVLKLLTCICIPVFLILWPVVSIGASIIGGALYGFLSPIFATFDAVG 120
WT Y I AKQLGP+LK+ C+C+P+ +ILW VVSI SI+GGALYGFLSPIFATFDAVG
Sbjct: 61 WTLYSIASAKQLGPILKIFLCLCVPLGVILWLVVSIVGSILGGALYGFLSPIFATFDAVG 120
Query: 121 EGKTNDIFHCFYDGTWSTIKHSFTIVRDFKDVCFHSYFSLMDDLRQKQAPDGKYYEIRLL 180
EGK+N FHCFYDGTWST++ SFT+V DFKDVCFHSYFS MDDLR A D YYEIRLL
Sbjct: 121 EGKSNPFFHCFYDGTWSTVQGSFTVVCDFKDVCFHSYFSFMDDLRTPSA-DRHYYEIRLL 179
Query: 181 YIPGAIIAGGLGVLIDVPVISVVALCKSPYMLFKGWHRLFHDLIGREGPFLETICVPLAG 240
IPGA+I LG+L+D PVIS++ALCKSPYMLFKGWHRLFHDLIGREGPFLET+CVP+AG
Sbjct: 180 QIPGAVIVAVLGILVDFPVISLLALCKSPYMLFKGWHRLFHDLIGREGPFLETMCVPIAG 239
Query: 241 LAIILWPLAVVGAVLGSMVTSIFLGAYAGVVVYQESSLWFGLRYIIAALSIYDEYSNDIL 300
L I+LWPLAVVGAVLGSMV+S+FLGAY GVV YQESS +FGL Y++A++SIYDEYSND+L
Sbjct: 240 LVILLWPLAVVGAVLGSMVSSVFLGAYGGVVSYQESSFFFGLCYVVASVSIYDEYSNDVL 299
Query: 301 DMPEGSCFPRPQYRKKADLSRTS---TFSRPSSFKDPPSRTSSLRKP-IDLKPLEVSCAI 356
DMPEGSCFPRP YR+ +++ T+ SRP+SFK PSR S + P IDLKPL++ A+
Sbjct: 300 DMPEGSCFPRPIYRRNEEVASTTLSGGLSRPNSFKTTPSRGGSNKGPMIDLKPLDLLEAL 359
Query: 357 F 357
F
Sbjct: 360 F 360
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224055641|ref|XP_002298580.1| predicted protein [Populus trichocarpa] gi|222845838|gb|EEE83385.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|255572012|ref|XP_002526947.1| conserved hypothetical protein [Ricinus communis] gi|223533699|gb|EEF35434.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|30693640|ref|NP_198880.2| uncharacterized protein [Arabidopsis thaliana] gi|28393245|gb|AAO42051.1| unknown protein [Arabidopsis thaliana] gi|28827666|gb|AAO50677.1| unknown protein [Arabidopsis thaliana] gi|332007193|gb|AED94576.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|9758091|dbj|BAB08535.1| unnamed protein product [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|30688768|ref|NP_189375.2| uncharacterized protein [Arabidopsis thaliana] gi|332278120|sp|Q8GUM4.2|Y3739_ARATH RecName: Full=Uncharacterized membrane protein At3g27390 gi|332643790|gb|AEE77311.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|27311557|gb|AAO00744.1| Unknown protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|356571451|ref|XP_003553890.1| PREDICTED: uncharacterized membrane protein At3g27390-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|356558791|ref|XP_003547686.1| PREDICTED: uncharacterized membrane protein At3g27390-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|225452236|ref|XP_002268688.1| PREDICTED: uncharacterized membrane protein At3g27390 [Vitis vinifera] gi|296081327|emb|CBI17709.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 360 | ||||||
| TAIR|locus:2168803 | 586 | AT5G40640 [Arabidopsis thalian | 0.988 | 0.607 | 0.637 | 1.7e-123 | |
| TAIR|locus:2086726 | 588 | AT3G27390 "AT3G27390" [Arabido | 0.988 | 0.605 | 0.620 | 9.2e-123 | |
| TAIR|locus:2135748 | 575 | AT4G12680 "AT4G12680" [Arabido | 0.944 | 0.591 | 0.497 | 1.1e-89 | |
| TAIR|locus:2114960 | 569 | AT4G37030 "AT4G37030" [Arabido | 0.769 | 0.486 | 0.401 | 1.7e-59 |
| TAIR|locus:2168803 AT5G40640 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 1214 (432.4 bits), Expect = 1.7e-123, P = 1.7e-123
Identities = 230/361 (63%), Positives = 267/361 (73%)
Query: 1 MEPPKGFLASLWSFICFLPYFXXXXXXXXXXXXXFCPVICLMMTIGNSAIILGLLPAHVL 60
MEPP G LASLW FI F+PYF CP+ICL + IGNSAIILGLLP H +
Sbjct: 1 MEPPTGILASLWQFILFIPYFTGLLLLGVIKGIVLCPLICLTVAIGNSAIILGLLPVHAI 60
Query: 61 WTYYCILRAKQLGPVLKLLTCICIPVFLILWPVVSIGASIIGGALYGFLSPIFATFDAVG 120
WT Y I AKQLGP+LK+ C+C+P+ +ILW VVSI S++GGA+YGFLSPIFATFDAVG
Sbjct: 61 WTLYSIASAKQLGPILKIFLCLCVPLGVILWLVVSILGSVLGGAIYGFLSPIFATFDAVG 120
Query: 121 EGKTNDIFHCFYDGTWSTIKHSFTIVRDFKDVCFHSYFSLMDDLRQKQAPDGKYYEIRXX 180
EGK+N FHCFYDGTWST++ SFT+V DFKDVCFHSYFS MDDLR A + YYEIR
Sbjct: 121 EGKSNPFFHCFYDGTWSTVQGSFTVVCDFKDVCFHSYFSFMDDLRTSTA-NRHYYEIRLL 179
Query: 181 XXXXXXXXXXXXXXXDVPVISVVALCKSPYMLFKGWHRLFHDLIGREGPFLETICVPLAG 240
D PVIS++ALCKSPYMLFKGWHRLFHDLIGREGPFLET+CVP+AG
Sbjct: 180 QIPGAVIVAVLGILVDFPVISLLALCKSPYMLFKGWHRLFHDLIGREGPFLETMCVPIAG 239
Query: 241 LAIILWPLAVVGAVLGSMVTSIFLGAYAGVVVYQESSLWFGLRYIIAALSIYDEYSNDIL 300
L I+LWPLAVVGAVLGS+V+S+FLGAY GVV YQESS +FGL Y++A++SIYDEYSND+L
Sbjct: 240 LVILLWPLAVVGAVLGSVVSSVFLGAYGGVVSYQESSFFFGLCYVVASVSIYDEYSNDVL 299
Query: 301 DMPEGSCFPRPQYRKK---ADLXXXXXXXXXXXXKDPPSRTSSLRKP-IDLKPLEVSCAI 356
DMPEGSCFPRP YR+ A K PSR S + P IDLKPL++ A+
Sbjct: 300 DMPEGSCFPRPIYRRNEEGASTAFSGGLSRPNSFKTTPSRGGSNKGPMIDLKPLDLLEAL 359
Query: 357 F 357
F
Sbjct: 360 F 360
|
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| TAIR|locus:2086726 AT3G27390 "AT3G27390" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2135748 AT4G12680 "AT4G12680" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2114960 AT4G37030 "AT4G37030" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| fgenesh2_kg.7__3351__AT5G40640.1 | annotation not avaliable (586 aa) | |||||||
(Arabidopsis lyrata) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
No hit with probability above 80.00
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00