Citrus Sinensis ID: 018136

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360
MESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIESGQGPYEIQYDEEWLAITRTFNSVFPLTSQSANFGGVQHDMNDCRQWVRSRLQERGAKPFEFVRTVPCYDASQSLSIGAFAENPQNPQTESFLQFLELPNLFENALESREPTQSPATLDHKGPDLDPEEIPIDDEDELEELDE
cccccccHHHHHcccHHHHHcccccccccEEEEcccccccHHHHHcccccEEcccEEEEccccEEEEccEEEEEEcccccccccccccccccccccccccHHccHHHHHHHHHHcccccccEEEEcccccccccccccHHHHHHccHHHHHccccccccHHHHHHHHHHcccEEEEcccccEEEEEEcccccccccccccccccccccccEEEEEcccccccccccccHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccHHHcccc
cccccccHHHHHHccHHHHccccccccEEEEEEccccHHHHHHHHccccccccccEEEEccccEEEEccEEEEEEcccEcccccccccccccccccccEEEEEEEEEcEHHHHHHccccccEEEEcccccccHccccHHHHHHHcHHHHHHHHccccccHHHHHHHHHccccHHEEEEEEEEEEEEcccccccccEEEEEcccccccccEEEEEEcccccccccccccHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHccccccccEEccccccccccccccccccccccHHHHHHHHHHccccHHHHHHHHccccccccccccccccccccccccccHHHHHHccc
MESLNVPRKYREMKSFWKYysgqevapiptifiggnheaSNYLWELyyggwaapniYFLGFAGVvkfgnirigglsgiynarhyrlghyerppynestirsvyhvreydvhklmqieepidiflshdwpcgitdygnckelvRHKQYFEKeiqdgtlgsePAAQLLEKLkpsywfsahLHCKFAAVvqhgedspvtkflaldkclprrkfLQVFEiesgqgpyeiqyDEEWLAITRTFNsvfpltsqsanfggvqhdmndCRQWVRSRLqergakpfefvrtvpcydasqslsigafaenpqnpqtesFLQFLelpnlfenalesreptqspatldhkgpdldpeeipiddedeleelde
MESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHyerppynestiRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFeiesgqgpyEIQYDEEWLAITRTFNSVFPLTSQSANFGGVQHDMNDCRQWVRSRLQERGAKPFEFVRTVPCYDASQSLSIGAFAENPQNPQTESFLQFLELPNLFENALESREPTqspatldhkgpdldpeeipiddedeleelde
MESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIESGQGPYEIQYDEEWLAITRTFNSVFPLTSQSANFGGVQHDMNDCRQWVRSRLQERGAKPFEFVRTVPCYDASQSLSIGAFAENPQNPQTESFLQFLELPNLFENALESREPTQSPATLDHKGpdldpeeipiddedeleelde
***********EMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIESGQGPYEIQYDEEWLAITRTFNSVFPLTSQSANFGGVQHDMNDCRQWVRSRLQERGAKPFEFVRTVPCYDASQSLSIGAF***********FLQFLELPNLF*****************************************
**S*NVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHK**********TLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQHGEDSP*********CLPRRKFLQVFEIESGQGPYEIQYDEEWLAITRTFNSV*******************CRQWVRSRLQERGAKPFEFVRTVPC*************ENPQNPQTESFLQFLELPNLF*****************************************
MESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIESGQGPYEIQYDEEWLAITRTFNSVFPLTSQSANFGGVQHDMNDCRQWVRSRLQERGAKPFEFVRTVPCYDASQSLSIGAFAENPQNPQTESFLQFLELPNLFENAL***********LDHKGPDLDPEEIPIDDEDELEELDE
*ESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIESGQGPYEIQYDEEWLAITRTFNSVFPLTSQSANFGGVQHDMNDCRQWVRSRLQERGAKPFEFVRTVPCYDASQSLSIGAFAENPQNPQTESFLQFLELPNLFENALESR**********************************
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MESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIESGQGPYEIQYDEEWLAITRTFNSVFPLTSQSANFGGVQHDMNDCRQWVRSRLQERGAKPFEFVRTVPCYDASQSLSIGAFAENPQNPQTESFLQFLELPNLFENALESREPTQSPATLDHKGPDLDPEEIPIDDEDELEELDE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query360 2.2.26 [Sep-21-2011]
Q94K01418 Lariat debranching enzyme yes no 0.925 0.796 0.722 1e-138
Q6AU07407 Lariat debranching enzyme yes no 0.858 0.759 0.711 1e-130
Q6P886 534 Lariat debranching enzyme yes no 0.963 0.649 0.466 1e-88
Q6GPB8 534 Lariat debranching enzyme N/A no 0.855 0.576 0.494 1e-87
Q7ZWU9 533 Lariat debranching enzyme N/A no 0.969 0.654 0.465 9e-87
Q9UK59 544 Lariat debranching enzyme yes no 0.894 0.591 0.475 1e-86
Q7T3E4 568 Lariat debranching enzyme yes no 0.866 0.549 0.489 1e-85
Q923B1 550 Lariat debranching enzyme yes no 0.894 0.585 0.466 6e-85
Q5ZLM2536 Lariat debranching enzyme yes no 0.991 0.666 0.428 2e-84
Q9VSD7534 Lariat debranching enzyme yes no 0.855 0.576 0.432 7e-80
>sp|Q94K01|DBR1_ARATH Lariat debranching enzyme OS=Arabidopsis thaliana GN=DBR1 PE=2 SV=1 Back     alignment and function desciption
 Score =  491 bits (1263), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 242/335 (72%), Positives = 275/335 (82%), Gaps = 2/335 (0%)

Query: 1   MESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLG 60
           M+SLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAA NIYFLG
Sbjct: 49  MDSLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAATNIYFLG 108

Query: 61  FAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLMQIEEPI 120
           FAGVVKFGN+RIGGLSGIYN RHYR GH+ERPPYNESTIRSVYHVR+YDV KLMQ+EEP+
Sbjct: 109 FAGVVKFGNVRIGGLSGIYNERHYRSGHFERPPYNESTIRSVYHVRDYDVQKLMQLEEPL 168

Query: 121 DIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLH 180
           DIFLSHDWP GITDYG+ + L+R K YF +EI++ TLGS+PAA LLEKLKP YWFSAHLH
Sbjct: 169 DIFLSHDWPVGITDYGDSESLMRQKPYFRQEIEEKTLGSKPAALLLEKLKPQYWFSAHLH 228

Query: 181 CKFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIESGQGPYEIQYDEEWLAITRTFNS 240
           CKFAA VQHG D  VTKFLALDKCLP +KFLQ+ EIES  GP+E+ YDEEWLAITR FNS
Sbjct: 229 CKFAAAVQHGNDGSVTKFLALDKCLPGKKFLQIIEIESEPGPFEVLYDEEWLAITRKFNS 288

Query: 241 VFPLTSQSANFGGVQHDMNDCRQWVRSRLQERGAKPFEFVRTVPCYDASQSLSIGAFAEN 300
           +FPLT +  N       + + R+WVR +L+ER  KPFEF RTVP Y+ SQ +   +  E 
Sbjct: 289 IFPLTRRYTNV-STAGTIQESREWVRKKLEERQFKPFEFARTVPAYNPSQRV-FDSIPEI 346

Query: 301 PQNPQTESFLQFLELPNLFENALESREPTQSPATL 335
           PQNPQT S L+ L LP L +++  + E T  PA+L
Sbjct: 347 PQNPQTLSLLELLGLPYLLDSSPVTGERTDIPASL 381
Cleaves the 2'-5' phosphodiester linkage at the branch point of lariat intron pre-mRNAs after splicing and converts them into linear molecules that are subsequently degraded. It thereby facilitates ribonucleotide turnover. It may also participate in retrovirus replication via a RNA lariat intermediate in cDNA synthesis. Plays en essential role during embryogenesis.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: -EC: .EC: -
>sp|Q6AU07|DBR1_ORYSJ Lariat debranching enzyme OS=Oryza sativa subsp. japonica GN=DBR1 PE=2 SV=1 Back     alignment and function description
>sp|Q6P886|DBR1_XENTR Lariat debranching enzyme OS=Xenopus tropicalis GN=dbr1 PE=2 SV=1 Back     alignment and function description
>sp|Q6GPB8|DBR1A_XENLA Lariat debranching enzyme A OS=Xenopus laevis GN=dbr1-a PE=2 SV=1 Back     alignment and function description
>sp|Q7ZWU9|DBR1B_XENLA Lariat debranching enzyme B OS=Xenopus laevis GN=dbr1-b PE=2 SV=1 Back     alignment and function description
>sp|Q9UK59|DBR1_HUMAN Lariat debranching enzyme OS=Homo sapiens GN=DBR1 PE=1 SV=2 Back     alignment and function description
>sp|Q7T3E4|DBR1_DANRE Lariat debranching enzyme OS=Danio rerio GN=dbr1 PE=1 SV=1 Back     alignment and function description
>sp|Q923B1|DBR1_MOUSE Lariat debranching enzyme OS=Mus musculus GN=Dbr1 PE=1 SV=2 Back     alignment and function description
>sp|Q5ZLM2|DBR1_CHICK Lariat debranching enzyme OS=Gallus gallus GN=DBR1 PE=2 SV=1 Back     alignment and function description
>sp|Q9VSD7|DBR1_DROME Lariat debranching enzyme OS=Drosophila melanogaster GN=ldbr PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query360
359492991415 PREDICTED: lariat debranching enzyme [Vi 0.994 0.862 0.791 1e-164
302142122407 unnamed protein product [Vitis vinifera] 0.941 0.832 0.805 1e-160
255548668 760 RNA lariat debranching enzyme, putative 1.0 0.473 0.770 1e-159
224143367434 predicted protein [Populus trichocarpa] 1.0 0.829 0.723 1e-150
449441840413 PREDICTED: lariat debranching enzyme-lik 0.902 0.786 0.763 1e-149
449493293413 PREDICTED: lariat debranching enzyme-lik 0.902 0.786 0.763 1e-149
18417871418 Lariat debranching enzyme [Arabidopsis t 0.925 0.796 0.722 1e-136
297798790418 hypothetical protein ARALYDRAFT_913289 [ 0.922 0.794 0.718 1e-135
357115407406 PREDICTED: lariat debranching enzyme-lik 0.894 0.793 0.701 1e-134
357465981412 Lariat debranching enzyme [Medicago trun 0.85 0.742 0.745 1e-134
>gi|359492991|ref|XP_002283617.2| PREDICTED: lariat debranching enzyme [Vitis vinifera] Back     alignment and taxonomy information
 Score =  584 bits (1505), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 285/360 (79%), Positives = 307/360 (85%), Gaps = 2/360 (0%)

Query: 1   MESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLG 60
           +ESLNVP KYR M SFWKYYSGQEVAP PTIFIGGNHEASNYLWELYYGGWAAPNIYFLG
Sbjct: 49  LESLNVPPKYRSMNSFWKYYSGQEVAPFPTIFIGGNHEASNYLWELYYGGWAAPNIYFLG 108

Query: 61  FAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLMQIEEPI 120
           FAGVVKFGNIRIGGLSGIYN RHY LGHYERPPYNE  IRSVYHVREYDVHKLMQ+EEPI
Sbjct: 109 FAGVVKFGNIRIGGLSGIYNERHYHLGHYERPPYNERDIRSVYHVREYDVHKLMQVEEPI 168

Query: 121 DIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLH 180
           DIFLSHDWPCGITD+GN KELVR+K +FEKEIQ+ TLGS+ AA+LLEKLKPSYWFSAHLH
Sbjct: 169 DIFLSHDWPCGITDHGNWKELVRYKPFFEKEIQERTLGSKAAAELLEKLKPSYWFSAHLH 228

Query: 181 CKFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIESGQGPYEIQYDEEWLAITRTFNS 240
           CKFAA+VQHGE   VTKFLALDKCLP RKFLQ+ EIE+  GPYEIQYDEEWLAITR FNS
Sbjct: 229 CKFAALVQHGEVGQVTKFLALDKCLPGRKFLQIVEIETVPGPYEIQYDEEWLAITRKFNS 288

Query: 241 VFPLTSQSANFGGVQHDMNDCRQWVRSRLQERGAKPFEFVRTVPCYDASQSLSIGAFAEN 300
           +FPLT   AN GG Q DM DCR WVRSRL  RGAKPFEFV+TVPCYD SQS S   F+  
Sbjct: 289 IFPLTIHRANLGGAQVDMQDCRDWVRSRLLTRGAKPFEFVQTVPCYDPSQSASNSCFSGY 348

Query: 301 PQNPQTESFLQFLELPNLFENALESREPTQSPATLDHKGPDLDPEEIPIDDEDELEELDE 360
            +NPQTE  LQFLELP L +N LESR+PT SP +L  +  D + E+IPIDD DE+EEL E
Sbjct: 349 HRNPQTELLLQFLELPYLLDNTLESRDPTHSPMSLISR-EDYN-EDIPIDDMDEMEELAE 406

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|302142122|emb|CBI19325.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255548668|ref|XP_002515390.1| RNA lariat debranching enzyme, putative [Ricinus communis] gi|223545334|gb|EEF46839.1| RNA lariat debranching enzyme, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224143367|ref|XP_002324932.1| predicted protein [Populus trichocarpa] gi|222866366|gb|EEF03497.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449441840|ref|XP_004138690.1| PREDICTED: lariat debranching enzyme-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449493293|ref|XP_004159246.1| PREDICTED: lariat debranching enzyme-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|18417871|ref|NP_567881.1| Lariat debranching enzyme [Arabidopsis thaliana] gi|75250263|sp|Q94K01.1|DBR1_ARATH RecName: Full=Lariat debranching enzyme; Short=AtDBR1 gi|13877597|gb|AAK43876.1|AF370499_1 RNA lariat debranching enzyme - like protein [Arabidopsis thaliana] gi|114213511|gb|ABI54338.1| At4g31770 [Arabidopsis thaliana] gi|332660555|gb|AEE85955.1| Lariat debranching enzyme [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297798790|ref|XP_002867279.1| hypothetical protein ARALYDRAFT_913289 [Arabidopsis lyrata subsp. lyrata] gi|297313115|gb|EFH43538.1| hypothetical protein ARALYDRAFT_913289 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|357115407|ref|XP_003559480.1| PREDICTED: lariat debranching enzyme-like [Brachypodium distachyon] Back     alignment and taxonomy information
>gi|357465981|ref|XP_003603275.1| Lariat debranching enzyme [Medicago truncatula] gi|355492323|gb|AES73526.1| Lariat debranching enzyme [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query360
TAIR|locus:2124829418 DBR1 "AT4G31770" [Arabidopsis 0.925 0.796 0.722 1.1e-133
UNIPROTKB|Q6P886 534 dbr1 "Lariat debranching enzym 0.936 0.631 0.474 1.2e-83
UNIPROTKB|Q6GPB8 534 dbr1-a "Lariat debranching enz 0.880 0.593 0.498 8.2e-83
UNIPROTKB|E2QXS5 544 DBR1 "Uncharacterized protein" 0.830 0.549 0.509 2.8e-82
UNIPROTKB|Q7ZWU9 533 dbr1-b "Lariat debranching enz 0.905 0.611 0.480 7.4e-82
UNIPROTKB|Q9UK59 544 DBR1 "Lariat debranching enzym 0.905 0.599 0.483 9.4e-82
UNIPROTKB|A5PJS3 544 DBR1 "Uncharacterized protein" 0.905 0.599 0.469 6.6e-81
UNIPROTKB|Q5ZLM2 536 DBR1 "Lariat debranching enzym 0.905 0.608 0.472 1.4e-80
ZFIN|ZDB-GENE-030131-2466 568 dbr1 "debranching enzyme homol 0.866 0.549 0.486 1.8e-80
MGI|MGI:1931520 550 Dbr1 "debranching enzyme homol 0.905 0.592 0.478 4.7e-80
TAIR|locus:2124829 DBR1 "AT4G31770" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1310 (466.2 bits), Expect = 1.1e-133, P = 1.1e-133
 Identities = 242/335 (72%), Positives = 275/335 (82%)

Query:     1 MESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLG 60
             M+SLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAA NIYFLG
Sbjct:    49 MDSLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAATNIYFLG 108

Query:    61 FAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLMQIEEPI 120
             FAGVVKFGN+RIGGLSGIYN RHYR GH+ERPPYNESTIRSVYHVR+YDV KLMQ+EEP+
Sbjct:   109 FAGVVKFGNVRIGGLSGIYNERHYRSGHFERPPYNESTIRSVYHVRDYDVQKLMQLEEPL 168

Query:   121 DIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLH 180
             DIFLSHDWP GITDYG+ + L+R K YF +EI++ TLGS+PAA LLEKLKP YWFSAHLH
Sbjct:   169 DIFLSHDWPVGITDYGDSESLMRQKPYFRQEIEEKTLGSKPAALLLEKLKPQYWFSAHLH 228

Query:   181 CKFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIESGQGPYEIQYDEEWLAITRTFNS 240
             CKFAA VQHG D  VTKFLALDKCLP +KFLQ+ EIES  GP+E+ YDEEWLAITR FNS
Sbjct:   229 CKFAAAVQHGNDGSVTKFLALDKCLPGKKFLQIIEIESEPGPFEVLYDEEWLAITRKFNS 288

Query:   241 VFPLTSQSANFGGVQHDMNDCRQWVRSRLQERGAKPFEFVRTVPCYDASQSLSIGAFAEN 300
             +FPLT +  N       + + R+WVR +L+ER  KPFEF RTVP Y+ SQ +   +  E 
Sbjct:   289 IFPLTRRYTNVS-TAGTIQESREWVRKKLEERQFKPFEFARTVPAYNPSQRV-FDSIPEI 346

Query:   301 PQNPQTESFLQFLELPNLFENALESREPTQSPATL 335
             PQNPQT S L+ L LP L +++  + E T  PA+L
Sbjct:   347 PQNPQTLSLLELLGLPYLLDSSPVTGERTDIPASL 381
GO:0004722 "protein serine/threonine phosphatase activity" evidence=ISS
GO:0005634 "nucleus" evidence=ISM
GO:0006397 "mRNA processing" evidence=IEA
GO:0016787 "hydrolase activity" evidence=IEA
GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA
GO:0008419 "RNA lariat debranching enzyme activity" evidence=IDA
GO:0009790 "embryo development" evidence=IMP
UNIPROTKB|Q6P886 dbr1 "Lariat debranching enzyme" [Xenopus (Silurana) tropicalis (taxid:8364)] Back     alignment and assigned GO terms
UNIPROTKB|Q6GPB8 dbr1-a "Lariat debranching enzyme A" [Xenopus laevis (taxid:8355)] Back     alignment and assigned GO terms
UNIPROTKB|E2QXS5 DBR1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q7ZWU9 dbr1-b "Lariat debranching enzyme B" [Xenopus laevis (taxid:8355)] Back     alignment and assigned GO terms
UNIPROTKB|Q9UK59 DBR1 "Lariat debranching enzyme" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|A5PJS3 DBR1 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q5ZLM2 DBR1 "Lariat debranching enzyme" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-2466 dbr1 "debranching enzyme homolog 1 (S. cerevisiae)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
MGI|MGI:1931520 Dbr1 "debranching enzyme homolog 1 (S. cerevisiae)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q6AU07DBR1_ORYSJ3, ., 1, ., -, ., -0.71190.85830.7592yesno
Q94K01DBR1_ARATH3, ., 1, ., -, ., -0.72230.9250.7966yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00015037001
SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (408 aa)
(Vitis vinifera)
Predicted Functional Partners:
GSVIVG00020651001
SubName- Full=Chromosome chr14 scaffold_21, whole genome shotgun sequence; (263 aa)
   •  • 0.517
GSVIVG00007719001
SubName- Full=Chromosome chr3 scaffold_199, whole genome shotgun sequence; (387 aa)
   •    0.476
GSVIVG00018636001
SubName- Full=Chromosome chr12 scaffold_18, whole genome shotgun sequence; (144 aa)
   •• • 0.414
GSVIVG00001423001
RecName- Full=Ribonuclease; EC=3.1.26.-;; Endonuclease that specifically degrades the RNA of RN [...] (298 aa)
   •    0.407

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query360
cd00844262 cd00844, MPP_Dbr1_N, Dbr1 RNA lariat debranching e 1e-143
pfam05011147 pfam05011, DBR1, Lariat debranching enzyme, C-term 3e-36
pfam00149185 pfam00149, Metallophos, Calcineurin-like phosphoes 2e-08
cd07380150 cd07380, MPP_CWF19_N, Schizosaccharomyces pombe CW 1e-05
>gnl|CDD|163619 cd00844, MPP_Dbr1_N, Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain Back     alignment and domain information 
 Score =  406 bits (1045), Expect = e-143
 Identities = 139/216 (64%), Positives = 167/216 (77%), Gaps = 5/216 (2%)

Query: 1   MESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLG 60
           ++ + VP KYR+M  F+KYYSG++ API TIFIGGNHEASNYLWEL YGGW APNIY+LG
Sbjct: 47  LKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIGGNHEASNYLWELPYGGWVAPNIYYLG 106

Query: 61  FAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLMQIEEPI 120
           +AGVV FG +RI GLSGIY +  YR GH+ERPPY+E T RS YHVR  +V KL Q+++PI
Sbjct: 107 YAGVVNFGGLRIAGLSGIYKSHDYRKGHFERPPYSEDTKRSAYHVRNIEVFKLKQLKQPI 166

Query: 121 DIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLH 180
           DIFLSHDWP GI  +G+ K+L+R K +F ++I+ GTLGS  A +LL+ LKP YWFSAHLH
Sbjct: 167 DIFLSHDWPRGIYKHGDKKQLLRKKPFFRQDIESGTLGSPAAEELLKHLKPRYWFSAHLH 226

Query: 181 CKFAAVVQHGEDSP-----VTKFLALDKCLPRRKFL 211
            KFAA+V H   SP      TKFLALDKCLP R FL
Sbjct: 227 VKFAALVPHENKSPGNTNKETKFLALDKCLPGRDFL 262

Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 262
>gnl|CDD|218381 pfam05011, DBR1, Lariat debranching enzyme, C-terminal domain Back     alignment and domain information
>gnl|CDD|215750 pfam00149, Metallophos, Calcineurin-like phosphoesterase Back     alignment and domain information
>gnl|CDD|163623 cd07380, MPP_CWF19_N, Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 360
KOG2863456 consensus RNA lariat debranching enzyme [RNA proce 100.0
cd00844262 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-t 100.0
PF05011145 DBR1: Lariat debranching enzyme, C-terminal domain 100.0
KOG2476 528 consensus Uncharacterized conserved protein [Funct 100.0
cd07380150 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and re 99.93
cd07392188 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and rel 99.32
cd07388224 MPP_Tt1561 Thermus thermophilus Tt1561 and related 99.25
KOG3947305 consensus Phosphoesterases [General function predi 98.67
PF14582255 Metallophos_3: Metallophosphoesterase, calcineurin 98.53
COG2129226 Predicted phosphoesterases, related to the Icc pro 98.27
cd07397238 MPP_DevT Myxococcus xanthus DevT and related prote 98.24
PHA03008234 hypothetical protein; Provisional 98.04
cd07402240 MPP_GpdQ Enterobacter aerogenes GpdQ and related p 97.95
TIGR03729239 acc_ester putative phosphoesterase. Members of thi 97.92
cd07379135 MPP_239FB Homo sapiens 239FB and related proteins, 97.55
cd07393232 MPP_DR1119 Deinococcus radiodurans DR1119 and rela 97.51
PF00149200 Metallophos: Calcineurin-like phosphoesterase; Int 97.49
cd07404166 MPP_MS158 Microscilla MS158 and related proteins, 97.45
cd07403129 MPP_TTHA0053 Thermus thermophilus TTHA0053 and rel 96.89
cd00838131 MPP_superfamily metallophosphatase superfamily, me 96.89
PRK11148275 cyclic 3',5'-adenosine monophosphate phosphodieste 96.52
cd07396267 MPP_Nbla03831 Homo sapiens Nbla03831 and related p 96.46
cd08163257 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related 96.45
cd00839294 MPP_PAPs purple acid phosphatases of the metalloph 96.1
cd07400144 MPP_YydB Bacillus subtilis YydB and related protei 95.95
cd00840223 MPP_Mre11_N Mre11 nuclease, N-terminal metallophos 95.75
cd07385223 MPP_YkuE_C Bacillus subtilis YkuE and related prot 95.74
PRK04036504 DNA polymerase II small subunit; Validated 95.67
cd07401256 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metal 95.57
cd07395262 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, 95.21
cd07378277 MPP_ACP5 Homo sapiens acid phosphatase 5 and relat 95.09
PLN02533427 probable purple acid phosphatase 94.45
TIGR01854231 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. 94.2
cd07409281 MPP_CD73_N CD73 ecto-5'-nucleotidase and related p 94.05
cd07406257 MPP_CG11883_N Drosophila melanogaster CG11883 and 93.98
TIGR01530 550 nadN NAD pyrophosphatase/5'-nucleotidase NadN. Thi 93.89
PRK05340241 UDP-2,3-diacylglucosamine hydrolase; Provisional 93.28
cd07412288 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and 93.11
cd00841155 MPP_YfcE Escherichia coli YfcE and related protein 92.88
cd07399214 MPP_YvnB Bacillus subtilis YvnB and related protei 91.15
TIGR00040158 yfcE phosphoesterase, MJ0936 family. Members of th 90.54
cd07386243 MPP_DNA_pol_II_small_archeal_C archeal DNA polymer 90.5
cd08162313 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA 89.69
cd00845252 MPP_UshA_N_like Escherichia coli UshA-like family, 89.43
cd07405285 MPP_UshA_N Escherichia coli UshA and related prote 89.16
cd00842296 MPP_ASMase acid sphingomyelinase and related prote 87.96
COG1768230 Predicted phosphohydrolase [General function predi 87.89
PF12850156 Metallophos_2: Calcineurin-like phosphoesterase su 87.88
COG0737517 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesteras 86.49
cd07411264 MPP_SoxB_N Thermus thermophilus SoxB and related p 86.17
cd07410277 MPP_CpdB_N Escherichia coli CpdB and related prote 86.01
COG1409301 Icc Predicted phosphohydrolases [General function 85.52
PRK09558551 ushA bifunctional UDP-sugar hydrolase/5'-nucleotid 85.38
cd07381239 MPP_CapA CapA and related proteins, metallophospha 83.49
PRK094191163 bifunctional 2',3'-cyclic nucleotide 2'-phosphodie 82.79
cd07398217 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and relat 82.61
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification] Back     alignment and domain information 
Probab=100.00  E-value=2.4e-99  Score=733.28  Aligned_cols=350  Identities=50%  Similarity=0.813  Sum_probs=312.3

Q ss_pred             CcccccCccccccccHHHHHcCCCCCCccEEEEcCCCCCchhHHHHhcCCcccCcEEEeCCCcEEEECCeEEEEEcCccC
Q 018136            1 MESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYN   80 (360)
Q Consensus         1 l~~~~~P~ky~~lgdF~~Y~sG~~kaPvpTyFIgGNHE~s~~l~el~~GG~vapNIyyLG~~Gvv~~~GLRIagLSGi~~   80 (360)
                      |+|||||+|||+||+|++||+|+.+|||||||||||||+++||+||+|||||||||||||.+|||+++|+|||||||||+
T Consensus        49 ~~siavPpKy~~m~~F~~YYsge~~APVlTIFIGGNHEAsnyL~eLpyGGwVApNIyYlG~agVv~~~gvRIggiSGI~k  128 (456)
T KOG2863|consen   49 LKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIFIGGNHEASNYLQELPYGGWVAPNIYYLGYAGVVNFGGVRIGGISGIYK  128 (456)
T ss_pred             cccccCCHHHHHHHHHHHHhCCcccCceeEEEecCchHHHHHHHhcccCceeccceEEeeecceEEECCEEEeeccchhh
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccccCCCCCCCCCChhhhhhhhhhchHHHHHHhcccCCccEEEeCCCCCCccccCchhhHhhhcchhhhhccCCCCCcH
Q 018136           81 ARHYRLGHYERPPYNESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSE  160 (360)
Q Consensus        81 ~~~y~~~~~e~~p~~~~~~rs~yhvr~~dv~kL~~~~~~VDILLSHdWP~gI~~~g~~~~Ll~~kp~f~~~~~~~~lGS~  160 (360)
                      +++|+++|||++||+.+++||+||||++||.+|+|+..+||||||||||+||..|||.++|||.||||++|++.+.+||+
T Consensus       129 ~~dy~kgh~E~ppyn~stiRsiYHvR~~dV~~Lkqlk~piDIfLSHDWP~GI~~yGd~~~LLr~KPFFrqeie~~~LGSp  208 (456)
T KOG2863|consen  129 EHDYRKGHFEWPPYNNSTIRSIYHVRISDVAKLKQLKHPIDIFLSHDWPRGIYYYGDKKQLLRLKPFFRQEIEEGKLGSP  208 (456)
T ss_pred             hhhcccCCCCCCCccchhhhhhhhhhhhhhHHHHhhcCcceEEeecCCCcchhhcCCHHHHHhcCcHHHHHHhcCCcCCh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCEEEeeccCccccceeccCCCCCeeEEEEeccCCCCCCeeEEeeccCCC-CCceeeeCHHHHHHHHHhC
Q 018136          161 PAAQLLEKLKPSYWFSAHLHCKFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIESGQ-GPYEIQYDEEWLAITRTFN  239 (360)
Q Consensus       161 ~i~~Ll~~LkPRYhFsgHlH~~f~a~~~~~~~~~~TRFlaLdk~~~~rk~l~a~~i~~~~-~~~~l~yD~ewlai~~~~~  239 (360)
                      ++++|+..|||+||||||+||+|+|.+.|++..++|+|+||+||+|+|+|||+++++.++ +++.+.||.|||+|+|.|+
T Consensus       209 ~~~eLL~~LkP~yWfsAHLH~KFaA~v~H~~~~~~tkflaldKclp~~~flqile~~sdp~g~~~~eyd~ewlsi~~~tn  288 (456)
T KOG2863|consen  209 ALEELLEDLKPQYWFSAHLHVKFAALVQHNKRSHVTKFLALDKCLPNRNFLQILEIPSDPRGPMNVEYDNEWLSILRETN  288 (456)
T ss_pred             HHHHHHHHhCcchhhhhhHhhHHhhhhcccCcCCCcccccccccCCCcchhhhccCCCCCCCCcccchhhhHHHhhhccc
Confidence            999999999999999999999999999999999999999999999999999999998876 7889999999999999999


Q ss_pred             CCCCCCCCCCCCCCCC------CcchHHHHHHHHHhhhCCCCCCCceEecCCCCCCCCcccCCCCCCCCChhHHHHHHHc
Q 018136          240 SVFPLTSQSANFGGVQ------HDMNDCRQWVRSRLQERGAKPFEFVRTVPCYDASQSLSIGAFAENPQNPQTESFLQFL  313 (360)
Q Consensus       240 ~~~~~~~~~~~~~~~~------~~~~~~~~~v~~~~~~~~~~p~~f~~tap~~~~~~~~~~~~~~~~~~npqt~~f~~~l  313 (360)
                      .++.+.....++|+..      ...++.+.|+...+......|+||.+|++.|++..+   ..|+..-.||||+.||+.|
T Consensus       289 ~l~~~k~~~~~~p~~~~~r~e~~~~ep~~~~~~~k~~~~l~~~~~~~~~~~~~~~~~p---~~~~~~~~~P~~~~f~a~l  365 (456)
T KOG2863|consen  289 FLILVKCRYRNRPNRDLCRLEILEKEPDLSHVSWKDENHLMVPDNFSRTNFVYDPKEP---IVQNLHSNNPQTSVFSAEL  365 (456)
T ss_pred             hhhhhhhhhhcCCcccchhhhccccCCccchhhhcchhhhcCCCccccceeeeccccc---cccccccCCCchhhHHHHH
Confidence            9999998888887632      345667788888887778899999999999998765   2557778899999999999


Q ss_pred             C-CCcccCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 018136          314 E-LPNLFENALESREPTQSPATLDHKGPDLDPEEIPIDDED  353 (360)
Q Consensus       314 ~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  353 (360)
                      | |....-.-..+++..-.....+..-..++++||++|++.
T Consensus       366 ~rl~~~~~~~~~~~d~dlps~~~~e~~t~~~~~e~~~de~~  406 (456)
T KOG2863|consen  366 SRLRAMHVLREIERDIDLPSYDSPEPYTLKIQKEEMVDEKA  406 (456)
T ss_pred             hhhhhhhhhhhhhcCCCccccCCccccccccHHHHHhhhhh
Confidence            8 654433223332222222111111235677788777654

>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain Back     alignment and domain information
>PF05011 DBR1: Lariat debranching enzyme, C-terminal domain; InterPro: IPR007708 This presumed domain is found at the C terminus of lariat debranching enzyme Back     alignment and domain information
>KOG2476 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain Back     alignment and domain information
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain Back     alignment and domain information
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain Back     alignment and domain information
>KOG3947 consensus Phosphoesterases [General function prediction only] Back     alignment and domain information
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A Back     alignment and domain information
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only] Back     alignment and domain information
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain Back     alignment and domain information
>PHA03008 hypothetical protein; Provisional Back     alignment and domain information
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain Back     alignment and domain information
>TIGR03729 acc_ester putative phosphoesterase Back     alignment and domain information
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain Back     alignment and domain information
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain Back     alignment and domain information
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11 Back     alignment and domain information
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain Back     alignment and domain information
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain Back     alignment and domain information
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain Back     alignment and domain information
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional Back     alignment and domain information
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain Back     alignment and domain information
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain Back     alignment and domain information
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain Back     alignment and domain information
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain Back     alignment and domain information
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain Back     alignment and domain information
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain Back     alignment and domain information
>PRK04036 DNA polymerase II small subunit; Validated Back     alignment and domain information
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain Back     alignment and domain information
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain Back     alignment and domain information
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain Back     alignment and domain information
>PLN02533 probable purple acid phosphatase Back     alignment and domain information
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase Back     alignment and domain information
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain Back     alignment and domain information
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain Back     alignment and domain information
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN Back     alignment and domain information
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional Back     alignment and domain information
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain Back     alignment and domain information
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain Back     alignment and domain information
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain Back     alignment and domain information
>TIGR00040 yfcE phosphoesterase, MJ0936 family Back     alignment and domain information
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain Back     alignment and domain information
>cd08162 MPP_PhoA_N Synechococcus sp Back     alignment and domain information
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain Back     alignment and domain information
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain Back     alignment and domain information
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain Back     alignment and domain information
>COG1768 Predicted phosphohydrolase [General function prediction only] Back     alignment and domain information
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [] Back     alignment and domain information
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism] Back     alignment and domain information
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain Back     alignment and domain information
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain Back     alignment and domain information
>COG1409 Icc Predicted phosphohydrolases [General function prediction only] Back     alignment and domain information
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed Back     alignment and domain information
>cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain Back     alignment and domain information
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed Back     alignment and domain information
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query360
2yvt_A260 Hypothetical protein AQ_1956; structural genomics, 1e-05
1uf3_A228 Hypothetical protein TT1561; metallo-dependent pho 1e-05
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 Length = 260 Back     alignment and structure
 Score = 45.5 bits (107), Expect = 1e-05
 Identities = 24/181 (13%), Positives = 55/181 (30%), Gaps = 24/181 (13%)

Query: 2   ESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASN--YLWELYYGGWAAPNIYFL 59
             +    ++  +++  K++       + T  + G ++A    +L   Y    A PNI  L
Sbjct: 64  RKVIHENEHYIIETLDKFFREIGELGVKTFVVPGKNDAPLKIFLRAAYEAETAYPNIRVL 123

Query: 60  GFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLMQIEEP 119
                   G   + G  G+     +      + P             EY +  + +++  
Sbjct: 124 HEGFAGWRGEFEVIGFGGLLTEHEFEEDFVLKYPRWYV---------EYILKFVNELKPR 174

Query: 120 IDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHL 179
             + + +  P G              ++          GS     +++ L P      H+
Sbjct: 175 RLVTIFYTPPIGE----FVDRTPEDPKH---------HGSAVVNTIIKSLNPEVAIVGHV 221

Query: 180 H 180
            
Sbjct: 222 G 222
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 Length = 228 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query360
3rl5_A296 Metallophosphoesterase mpped2; alpha-beta fold, me 99.27
2yvt_A260 Hypothetical protein AQ_1956; structural genomics, 98.9
1uf3_A228 Hypothetical protein TT1561; metallo-dependent pho 98.84
3d03_A274 Phosphohydrolase; glycerophosphodiesterase, metall 97.83
3ib7_A330 ICC protein; metallophosphoesterase, alpha-beta fo 97.68
2xmo_A443 LMO2642 protein; phosphodiesterase, hydrolase; 1.7 96.67
2nxf_A322 Putative dimetal phosphatase; dinuclear metal cent 95.27
3tho_B379 Exonuclease, putative; adenosine triphosphate, bac 95.26
1ute_A313 Protein (II purple acid phosphatase); tartrate res 95.09
3av0_A386 DNA double-strand break repair protein MRE11; DNA 94.76
2q8u_A336 Exonuclease, putative; structural genomics, joint 92.38
3qfk_A527 Uncharacterized protein; structural genomics, cent 91.49
1hp1_A516 5'-nucleotidase; metallophosphatase, dinuclear, me 90.26
1xzw_A426 Purple acid phosphatase; hydrolase; HET: NAG FUC M 89.82
2qfp_A424 Purple acid phosphatase; binuclear, Fe-Zn, hydrola 89.51
3ive_A509 Nucleotidase; structural genomics, PSI-2, protein 89.26
3ztv_A 579 NAD nucleotidase, NADN; hydrolase, NAD pyrophospha 88.26
3ck2_A176 Conserved uncharacterized protein (predicted phosp 87.21
3tgh_A342 Glideosome-associated protein 50; phosphatase fold 86.91
4h1s_A530 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo 86.19
4h2g_A546 5'-nucleotidase; dimer, hydrolase, phosphatase, ex 85.02
2wdc_A562 SOXB, sulfur oxidation protein SOXB; sulfur-sulfur 83.77
1nnw_A252 Hypothetical protein; structural genomics, PSI, pr 83.7
1z2w_A192 Vacuolar protein sorting 29; VPS29, retromer, phos 81.78
>3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A* Back     alignment and structure
Probab=99.27  E-value=3.4e-11  Score=116.18  Aligned_cols=144  Identities=20%  Similarity=0.262  Sum_probs=94.4

Q ss_pred             ccEEEEcCCCCCc---hhHHHHh-----------------cCC--cccCcEEEeCCCcEEEECCeEEEEEcCccCCcccc
Q 018136           28 IPTIFIGGNHEAS---NYLWELY-----------------YGG--WAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYR   85 (360)
Q Consensus        28 vpTyFIgGNHE~s---~~l~el~-----------------~GG--~vapNIyyLG~~Gvv~~~GLRIagLSGi~~~~~y~   85 (360)
                      .++|+|.||||..   ..+..+.                 .+.  .+..|++||... +++++|+||.|..+.-..    
T Consensus       111 ~~v~~V~GNHD~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~-~~~i~Gl~i~Gsp~tP~~----  185 (296)
T 3rl5_A          111 EYKIVIAGNHELTFDKEFMADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNSIYLQDS-EVTVKGFRIYGAPWTPWF----  185 (296)
T ss_dssp             SEEEECCCTTCGGGCHHHHHHHTTSCGGGSHHHHTCCHHHHTTTGGGCTTSEECSSE-EEEETTEEEEEECCBCC-----
T ss_pred             CeEEEEcCCcccccchhhhhhhhcccccccccccccccchhhhHhhhcCCeEEecCC-cEEECCEEEEEecCCCCC----
Confidence            3589999999974   2222220                 011  234688999874 568999999996654211    


Q ss_pred             CCCCCCCCCChhhhhhhhhhchHHHHHHhcccCCccEEEeCCCCCCccccCchhhHhhhcchhhhhccCCCCCcHHHHHH
Q 018136           86 LGHYERPPYNESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQL  165 (360)
Q Consensus        86 ~~~~e~~p~~~~~~rs~yhvr~~dv~kL~~~~~~VDILLSHdWP~gI~~~g~~~~Ll~~kp~f~~~~~~~~lGS~~i~~L  165 (360)
                          ..+.|+.++...       -..++.++..++||||||..|.++.....              ......|+..+.+.
T Consensus       186 ----~~~~f~~~~~~~-------~~~~~~~ip~~~dILvTH~PP~g~~D~~~--------------~~~~~~G~~~L~~~  240 (296)
T 3rl5_A          186 ----NGWGFNLPRGQS-------LLDKWNLIPEGTDILMTHGPPLGFRDWVP--------------KELQRVGCVELLNT  240 (296)
T ss_dssp             -----CCTTBCCTTHH-------HHHHHTTSCTTCSEEEESSCBTTSSCEEG--------------GGTEECSBHHHHHH
T ss_pred             ----CCcCCCcchHHH-------HHHHHhhCCCCCeEEEECCCccccccccc--------------cccCcCChHHHHHH
Confidence                112232222111       12234456678999999999999843210              01246899999998


Q ss_pred             H-HHhCCCEEEeeccCccccceeccCCCCCeeEEEEeccCCC
Q 018136          166 L-EKLKPSYWFSAHLHCKFAAVVQHGEDSPVTKFLALDKCLP  206 (360)
Q Consensus       166 l-~~LkPRYhFsgHlH~~f~a~~~~~~~~~~TRFlaLdk~~~  206 (360)
                      + ++.+|++|++||.|..+.....     ..|.|++-+.|..
T Consensus       241 i~~~~~p~l~v~GH~H~~~~~~~~-----g~t~vvNpGs~~~  277 (296)
T 3rl5_A          241 VQRRVRPKLHVFGGIHEGYGTMTD-----GYTTYINASTCTV  277 (296)
T ss_dssp             HHHTTCCSEEEECSCGGGCEEEEC-----SSCEEEECBCSCT
T ss_pred             HHHhcCCCEEEECCccCCCceEEE-----CCEEEEECCcCCc
Confidence            8 6999999999999987754322     2599999999984
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 Back     alignment and structure
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 Back     alignment and structure
>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A Back     alignment and structure
>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A Back     alignment and structure
>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} Back     alignment and structure
>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 Back     alignment and structure
>3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C Back     alignment and structure
>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* Back     alignment and structure
>3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A* Back     alignment and structure
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A Back     alignment and structure
>3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp} Back     alignment and structure
>1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A Back     alignment and structure
>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 Back     alignment and structure
>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* Back     alignment and structure
>3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A* Back     alignment and structure
>3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A* Back     alignment and structure
>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7 Back     alignment and structure
>3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} Back     alignment and structure
>4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens} Back     alignment and structure
>4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A* Back     alignment and structure
>2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A Back     alignment and structure
>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A Back     alignment and structure
>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query360
d2yvta1257 Uncharacterized protein Aq_1956 {Aquifex aeolicus 98.89
d1uf3a_228 Hypothetical protein TT1561 {Thermus thermophilus 98.66
d3d03a1271 Glycerophosphodiesterase GpdQ {Enterobacter aeroge 97.57
d2hy1a1256 Rv0805 cyclic nucleotide phosphodiesterase {Mycoba 97.38
d2nxfa1320 Uncharacterized C17orf48 homolog zgc:64213 {Zebraf 92.93
d2qfra2312 Plant purple acid phosphatase, catalytic domain {K 91.07
d2z1aa2302 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term 90.15
d1s3la_165 Putative phosphodiesterase MJ0936 {Methanococcus j 87.6
d1utea_302 Mammalian purple acid phosphatase {Pig (Sus scrofa 83.9
>d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: TT1561-like
domain: Uncharacterized protein Aq 1956
species: Aquifex aeolicus [TaxId: 63363]

Probab=98.89  E-value=3.4e-09  Score=92.33  Aligned_cols=159  Identities=14%  Similarity=0.103  Sum_probs=97.3

Q ss_pred             cHHHHHcCCCCCCccEEEEcCCCCCchhHH--HHhcCCcccCcEEEeCCCcEEEECCeEEEEEcCccCCccccCCCCCCC
Q 018136           15 SFWKYYSGQEVAPIPTIFIGGNHEASNYLW--ELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERP   92 (360)
Q Consensus        15 dF~~Y~sG~~kaPvpTyFIgGNHE~s~~l~--el~~GG~vapNIyyLG~~Gvv~~~GLRIagLSGi~~~~~y~~~~~e~~   92 (360)
                      ++..++...+.+.+|+|+|+|||+......  +....-.+.+++..+....+...+++.|++++|......+....  ..
T Consensus        74 ~~~~~~~~L~~~~~pv~~i~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~  151 (257)
T d2yvta1          74 TLDKFFREIGELGVKTFVVPGKNDAPLKIFLRAAYEAETAYPNIRVLHEGFAGWRGEFEVIGFGGLLTEHEFEEDF--VL  151 (257)
T ss_dssp             HHHHHHHHHHTTCSEEEEECCTTSCCHHHHHHHHHHTTTTCTTEEECSSEEEEETTTEEEEEECSEEESSCCBSSS--SC
T ss_pred             hHHHHHHHHHhcCCcEEEEeCCCcchhhHHHHHhccccccccccccccceeEEecCCeEEEEeccccCCccccchh--hh
Confidence            445555555678899999999999765433  33333344566666666555455889999999876543222110  00


Q ss_pred             CCChhhhhhhhhhchHHHH-HHhcccCCccEEEeCCCCCCccccCchhhHhhhcchhhhhccCCCCCcHHHHHHHHHhCC
Q 018136           93 PYNESTIRSVYHVREYDVH-KLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKP  171 (360)
Q Consensus        93 p~~~~~~rs~yhvr~~dv~-kL~~~~~~VDILLSHdWP~gI~~~g~~~~Ll~~kp~f~~~~~~~~lGS~~i~~Ll~~LkP  171 (360)
                      .  .....      ..... .+.+.....+|+++|-.|.+-.. +..            .......|+..+.++++..+|
T Consensus       152 ~--~~~~~------~~~~~~~~~~~~~~~~Il~~H~pp~~~~~-~~~------------~~~~~~~g~~~l~~~l~~~~~  210 (257)
T d2yvta1         152 K--YPRWY------VEYILKFVNELKPRRLVTIFYTPPIGEFV-DRT------------PEDPKHHGSAVVNTIIKSLNP  210 (257)
T ss_dssp             E--EEHHH------HHHHGGGGGGSCCCEEEEEESSCCSCSST-TCB------------TTBSCCCSCHHHHHHHHHHCC
T ss_pred             h--hhhhH------HHHHHHHhhhcccccEEEEEccccccccc-ccc------------ccchhhhhhHHHHHhhhhcCC
Confidence            0  00000      00011 11223456789999999987421 111            113456899999999999999


Q ss_pred             CEEEeeccCccccceeccCCCCCeeEEEEecc
Q 018136          172 SYWFSAHLHCKFAAVVQHGEDSPVTKFLALDK  203 (360)
Q Consensus       172 RYhFsgHlH~~f~a~~~~~~~~~~TRFlaLdk  203 (360)
                      .|+++||.|..+...       ..|.++.-+.
T Consensus       211 ~~~~~GHiH~~~~~~-------g~~~~~~pGs  235 (257)
T d2yvta1         211 EVAIVGHVGKGHELV-------GNTIVVNPGE  235 (257)
T ss_dssp             SEEEECSSCCEEEEE-------TTEEEEECCB
T ss_pred             cEEEEEeecCCeEec-------CCeEEEECCc
Confidence            999999999654311       2467776554
>d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} Back     information, alignment and structure
>d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} Back     information, alignment and structure
>d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Back     information, alignment and structure
>d2z1aa2 d.159.1.2 (A:28-329) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936 {Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure