Citrus Sinensis ID: 018138

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360
Protein Sequence
MLRTLPIASPSSLTVSTYNKTSLPSQSSLKLSPFCVNNDGGNNISYCYSTSRRLALFQLGAAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFLKELE
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccccccccccccccccccEEEEcccccccccccccccccccccccccccEEEEEEEEEccHHHHHHHHHHHcccEEEEEEEcccccEEEEEEEccccccccEEEEEEcccccccccccccEEEEEEEccHHHHHHHHHHcccEEEEccccccccccEEEEEEcccccEEEEEEccccccccccEEEEEccHHHHHHHHHHccEEEEEccccccccEEEEEEcccccccccccccEEEEEEcccHHHHHHHHHHcccEEEccccccccccEEEEEEEcccccEEEEEcccccccccc
Secondary Structure Prediction (SSPRO)
cEEEEEcccccccccccccccccccccccccccccccccccccEEccccccHHHHHHHHHcHccHHHHcccccHHHHHcccccccEccccccccccccccHHHHHHcccccccEEEEEEEEEccHHHHHHHHHHHHcccEEEEcccccccEEEEEEEcccccccEEEEEEEcccccccccccccEEEEEEcHHHHHHHHHHHHcccEEEEcccccccccEEEEEEEcccccEEEEEEcccccccccEEEEEEccHHHHHHHHHHHHEEEEccccccccEEEEEEEcccccEcccccEEEEEEEEcccHHHHHHHHHHHcccEEccccccccccEEEEEEEcccccEEEEEccHHHHHHcc
Coil and Loop (DISEMBL)
mlrtlpiaspssltvstynktslpsqsslklspfcvnndggnnisyCYSTSRRLALFQLgaaipqshfFGAKALKLLRAegstieastsgnmaptsntvteqnVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMkllrkrdipedrytnaflgygpedsHFVVELTYnygvdkydigtgfghfgiAVEDVAKTVDLVKAkggkvtrepgpvkggntviafiedpdgykfellergptpeplcQVMLRVGDLDRAINFYKKYTIAVMGYGPEDKNAVLELTYnhgvteydkgngyaqiaigtdDVYKTAEAIKLsggkitrepgplpgintkitacldpdgwksvFVDNLDFLKELE
Flexible Loop (DISEMBL)
mlrtlpiaspssltvsTYNKTslpsqsslklsPFCVNNDGGNNISYCYSTSRRLALFQLGAAIPQSHFFGAKALKLLRAEGSTIeastsgnmaptsntvteqnvldwvksdkrrMLHVVyrvgdldktikFYTECLGmkllrkrdipeDRYTNAFlgygpedsHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKakggkvtrepgpvkggntvIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLsggkitrepgplpGINTKITacldpdgwkSVFVDNLDFLKELE
Low Complexity Region (SEG)
MLRTLPIASPSSLTVSTYNKTslpsqsslklspFCVNNDGGNNISYCYSTSRRLALFQLGAAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFLKELE
Disordered region (IsUnstruct)
*******************************SPFCVNNDGGNNISYCYSTSRRLALFQLGAAIPQSHFFGAKALKLLRA*********************EQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFL****
Disordered Region (DISOPRED)
******************************************************ALFQLGAAIPQ***************************************LDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFL****
Disordered Region (DISEMBL)
MLRTLPIASPSSLTVSTYNKTSLPSQSSLKLSPFCVNNDGGNNISYCYSTSRRLALFQLGAAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFLKELE
Disordered Region (DISPRO)
MLRTLPIASPSSLTVSTYNKTSLPSQSSLKLSPFCVNNDGGNNISYCYSTSRRLALFQLGAAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFL*ELE
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLRTLPIASPSSLTVSTYNKTSLPSQSSLKLSPFCVNNDGGNNISYCYSTSRRLALFQLGAAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFLKELE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	360	2.2.26 [Sep-21-2011]
Q8W593	350	Probable lactoylglutathio	yes	no	0.863	0.888	0.75	1e-143
Q39366	282	Putative lactoylglutathio	N/A	no	0.716	0.914	0.689	1e-111
Q948T6	291	Lactoylglutathione lyase	no	no	0.747	0.924	0.666	1e-110
P0AC83	135	Lactoylglutathione lyase	yes	no	0.3	0.8	0.588	1e-39
P0AC81	135	Lactoylglutathione lyase	N/A	no	0.3	0.8	0.588	1e-39
P0AC82	135	Lactoylglutathione lyase	N/A	no	0.3	0.8	0.588	1e-39
Q55595	131	Probable lactoylglutathio	N/A	no	0.297	0.816	0.593	1e-39
P0A1Q2	135	Lactoylglutathione lyase	yes	no	0.3	0.8	0.564	6e-39
P0A1Q3	135	Lactoylglutathione lyase	N/A	no	0.3	0.8	0.564	6e-39
P44638	135	Lactoylglutathione lyase	yes	no	0.322	0.859	0.575	1e-38

>sp|Q8W593|LGUC_ARATH Probable lactoylglutathione lyase, chloroplast OS=Arabidopsis thaliana GN=At1g67280 PE=2 SV=1

 Score =  508 bits (1307), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 252/336 (75%), Positives = 276/336 (82%), Gaps = 25/336 (7%)

Query: 47  CYSTSRRLALFQLGA------AIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVT 100
           C+S S R  +  L         +PQS  FG  + KLLR   + +  + SG  A      T
Sbjct: 18  CFSDSPRFPISLLSRNLSRTLHVPQSQLFGLTSHKLLRRSVNCLGVAESGKAA---QATT 74

Query: 101 EQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGP 160
           + ++L WVK+DKRRMLHVVYRVGD+D+TIKFYTECLGMKLLRKRDIPE++YTNAFLGYGP
Sbjct: 75  QDDLLTWVKNDKRRMLHVVYRVGDMDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGP 134

Query: 161 EDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNT 220
           EDSHFV+ELTYNYGVDKYDIG GFGHFGIAV+DVAKTV+LVKAKGGKV+REPGPVKGG T
Sbjct: 135 EDSHFVIELTYNYGVDKYDIGAGFGHFGIAVDDVAKTVELVKAKGGKVSREPGPVKGGKT 194

Query: 221 VIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYK----------------K 264
           VIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAI FY+                K
Sbjct: 195 VIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAIKFYEKAFGMELLRTRDNPEYK 254

Query: 265 YTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITR 324
           YTIA+MGYGPEDK  VLELTYN+GVTEYDKGN YAQIAIGTDDVYKTAEAIKL GGKITR
Sbjct: 255 YTIAMMGYGPEDKFPVLELTYNYGVTEYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKITR 314

Query: 325 EPGPLPGINTKITACLDPDGWKSVFVDNLDFLKELE 360
           EPGPLPGI+TKITACLDPDGWKSVFVDN+DFLKELE
Sbjct: 315 EPGPLPGISTKITACLDPDGWKSVFVDNIDFLKELE 350

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
Arabidopsis thaliana (taxid: 3702)
EC: 4EC: .EC: 4EC: .EC: 1EC: .EC: 5

>sp|Q39366|LGUL_BRAOG Putative lactoylglutathione lyase OS=Brassica oleracea var. gemmifera PE=2 SV=1

 Score =  401 bits (1030), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 191/277 (68%), Positives = 225/277 (81%), Gaps = 19/277 (6%)

Query: 103 NVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPED 162
           ++++W K DKRR LHVVYRVGDLD+TI+FYTEC GMK+LRKRD+PE++Y+NAFLG+GPE 
Sbjct: 6   DLVEWPKKDKRRFLHVVYRVGDLDRTIQFYTECFGMKVLRKRDVPEEKYSNAFLGFGPET 65

Query: 163 SHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVI 222
           S+FVVELTYNYGV  YDIGTGFGHF I+ +DV+K V+ V+AKGG VTREPGPVKGG +VI
Sbjct: 66  SNFVVELTYNYGVSSYDIGTGFGHFAISTQDVSKMVEAVRAKGGNVTREPGPVKGGGSVI 125

Query: 223 AFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKY---------------TI 267
           AF++DPDGY FEL++RGPTPEPLCQVMLRVGDLDRA+ F +K                TI
Sbjct: 126 AFVKDPDGYTFELIQRGPTPEPLCQVMLRVGDLDRAVKFMEKALGMRLLRRIERPEYNTI 185

Query: 268 AVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLS----GGKIT 323
            +MGY  E ++ VLELTYN+GVTEY KGN YAQIAIGTDDVYK+AE +K+     GGKIT
Sbjct: 186 GMMGYAEEYESIVLELTYNYGVTEYTKGNAYAQIAIGTDDVYKSAEVVKIVNQELGGKIT 245

Query: 324 REPGPLPGINTKITACLDPDGWKSVFVDNLDFLKELE 360
           RE GPLPG+ TKI + LDPDGWK V VDN DFLKELE
Sbjct: 246 REAGPLPGLGTKIVSFLDPDGWKQVLVDNEDFLKELE 282

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Brassica oleracea var. gemmifera (taxid: 178616)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q948T6|LGUL_ORYSJ Lactoylglutathione lyase OS=Oryza sativa subsp. japonica GN=GLX-I PE=1 SV=2

 Score =  399 bits (1025), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 196/294 (66%), Positives = 231/294 (78%), Gaps = 25/294 (8%)

Query: 88  TSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIP 147
            SG+ A  S  V    VL+W K DK+R+LH VYRVGDLD+TIK YTEC GMKLLRKRD+P
Sbjct: 2   ASGSEAEKSPEV----VLEWPKKDKKRLLHAVYRVGDLDRTIKCYTECFGMKLLRKRDVP 57

Query: 148 EDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAK-GG 206
           E++YTNAFLG+GPED++F +ELTYNYGVDKYDIG GFGHF IA EDV K  + +K+    
Sbjct: 58  EEKYTNAFLGFGPEDTNFALELTYNYGVDKYDIGAGFGHFAIATEDVYKLAEKIKSSCCC 117

Query: 207 KVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYK--- 263
           K+TREPGPVKGG+TVIAF +DPDGY FEL++RGPTPEPLCQVMLRVGDLDR+I FY+   
Sbjct: 118 KITREPGPVKGGSTVIAFAQDPDGYMFELIQRGPTPEPLCQVMLRVGDLDRSIKFYEKAL 177

Query: 264 -------------KYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYK 310
                        KYTIA++GY  EDK  V+ELTYN+GVTEY KGN YAQ+AIGT+DVYK
Sbjct: 178 GMKLLRKKDVPDYKYTIAMLGYADEDKTTVIELTYNYGVTEYTKGNAYAQVAIGTEDVYK 237

Query: 311 TAEAIKLS----GGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFLKELE 360
           +AEA++L     GGKI R+PGPLPG+NTKI + LDPDGWK V VDN DFLKEL+
Sbjct: 238 SAEAVELVTKELGGKILRQPGPLPGLNTKIASFLDPDGWKVVLVDNADFLKELQ 291

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0AC83|LGUL_SHIFL Lactoylglutathione lyase OS=Shigella flexneri GN=gloA PE=3 SV=1

 Score =  164 bits (415), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 73/124 (58%), Positives = 97/124 (78%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           R+LH + RVGDL ++I FYT+ LGMKLLR  + PE +Y+ AF+GYGPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
           GVDKY++GT +GH  ++V++ A+  + ++  GG VTRE GPVKGG TVIAF+EDPDGYK 
Sbjct: 62  GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query: 234 ELLE 237
           EL+E
Sbjct: 122 ELIE 125

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Shigella flexneri (taxid: 623)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0AC81|LGUL_ECOLI Lactoylglutathione lyase OS=Escherichia coli (strain K12) GN=gloA PE=1 SV=1

 Score =  164 bits (415), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 73/124 (58%), Positives = 97/124 (78%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           R+LH + RVGDL ++I FYT+ LGMKLLR  + PE +Y+ AF+GYGPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
           GVDKY++GT +GH  ++V++ A+  + ++  GG VTRE GPVKGG TVIAF+EDPDGYK 
Sbjct: 62  GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query: 234 ELLE 237
           EL+E
Sbjct: 122 ELIE 125

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Escherichia coli (strain K12) (taxid: 83333)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0AC82|LGUL_ECO57 Lactoylglutathione lyase OS=Escherichia coli O157:H7 GN=gloA PE=3 SV=1

 Score =  164 bits (415), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 73/124 (58%), Positives = 97/124 (78%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           R+LH + RVGDL ++I FYT+ LGMKLLR  + PE +Y+ AF+GYGPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
           GVDKY++GT +GH  ++V++ A+  + ++  GG VTRE GPVKGG TVIAF+EDPDGYK 
Sbjct: 62  GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query: 234 ELLE 237
           EL+E
Sbjct: 122 ELIE 125

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Escherichia coli O157:H7 (taxid: 83334)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q55595|LGUL_SYNY3 Probable lactoylglutathione lyase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=gloA PE=3 SV=1

 Score =  164 bits (414), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 73/123 (59%), Positives = 95/123 (77%)

Query: 115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYG 174
           +LH + RVGDLDK+++FY + LGM LLRK+D P   +T AF+GYG E  + V+ELT+N+G
Sbjct: 3   LLHTMIRVGDLDKSLQFYCDILGMNLLRKKDYPSGEFTLAFVGYGKESENAVIELTHNWG 62

Query: 175 VDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFE 234
            DKYD+G GFGH  + VED+  T D ++ KGGKV REPGP+K G TVIAF+EDPDGYK E
Sbjct: 63  TDKYDLGNGFGHIALGVEDIYSTCDKIRDKGGKVVREPGPMKHGTTVIAFVEDPDGYKIE 122

Query: 235 LLE 237
           L++
Sbjct: 123 LIQ 125

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0A1Q2|LGUL_SALTY Lactoylglutathione lyase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=gloA PE=3 SV=1

 Score =  161 bits (408), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 70/124 (56%), Positives = 95/124 (76%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           R+LH + RVGDL ++I FYT  LGMKLLR  + PE +Y+ AF+GYGPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIAFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
           GV+ YD+G  +GH  ++V++ A+  + ++  GG VTRE GPVKGG+T+IAF+EDPDGYK 
Sbjct: 62  GVESYDMGNAYGHIALSVDNAAEACERIRQNGGNVTREAGPVKGGSTIIAFVEDPDGYKI 121

Query: 234 ELLE 237
           EL+E
Sbjct: 122 ELIE 125

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (taxid: 99287)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0A1Q3|LGUL_SALTI Lactoylglutathione lyase OS=Salmonella typhi GN=gloA PE=3 SV=1

 Score =  161 bits (408), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 70/124 (56%), Positives = 95/124 (76%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           R+LH + RVGDL ++I FYT  LGMKLLR  + PE +Y+ AF+GYGPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIAFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
           GV+ YD+G  +GH  ++V++ A+  + ++  GG VTRE GPVKGG+T+IAF+EDPDGYK 
Sbjct: 62  GVESYDMGNAYGHIALSVDNAAEACERIRQNGGNVTREAGPVKGGSTIIAFVEDPDGYKI 121

Query: 234 ELLE 237
           EL+E
Sbjct: 122 ELIE 125

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Salmonella typhi (taxid: 90370)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P44638|LGUL_HAEIN Lactoylglutathione lyase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=gloA PE=1 SV=1

 Score =  160 bits (405), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 76/132 (57%), Positives = 97/132 (73%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           ++LH + RVGDLD++IKFY + LGM+LLR  + PE +YT AFLGY   +S   +ELTYN+
Sbjct: 2   QILHTMLRVGDLDRSIKFYQDVLGMRLLRTSENPEYKYTLAFLGYEDGESAAEIELTYNW 61

Query: 174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
           GVDKY+ GT +GH  I V+D+  T + V+A GG VTRE GPVKGG+TVIAF+EDPDGYK 
Sbjct: 62  GVDKYEHGTAYGHIAIGVDDIYATCEAVRASGGNVTREAGPVKGGSTVIAFVEDPDGYKI 121

Query: 234 ELLERGPTPEPL 245
           E +E   T   L
Sbjct: 122 EFIENKSTKSGL 133

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (taxid: 71421)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	360
359484559	362	PREDICTED: probable lactoylglutathione l	0.958	0.953	0.718	1e-153
449443163	362	PREDICTED: probable lactoylglutathione l	0.961	0.955	0.715	1e-153
225429965	364	PREDICTED: probable lactoylglutathione l	0.863	0.854	0.805	1e-152
296081860	359	unnamed protein product [Vitis vinifera]	0.863	0.866	0.805	1e-152
225445150	355	PREDICTED: probable lactoylglutathione l	0.877	0.890	0.778	1e-150
255550986	389	lactoylglutathione lyase, putative [Rici	0.861	0.796	0.763	1e-149
255546389	369	lactoylglutathione lyase, putative [Rici	0.838	0.818	0.804	1e-148
224119744	355	predicted protein [Populus trichocarpa]	0.933	0.946	0.710	1e-147
217073098	347	unknown [Medicago truncatula] gi|3885031	0.916	0.951	0.679	1e-147
357520937	347	Lactoylglutathione lyase [Medicago trunc	0.916	0.951	0.679	1e-147

>gi|359484559|ref|XP_003633121.1| PREDICTED: probable lactoylglutathione lyase, chloroplast-like isoform 2 [Vitis vinifera] gi|297738782|emb|CBI28027.3| unnamed protein product [Vitis vinifera]

 Score =  546 bits (1408), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 271/377 (71%), Positives = 307/377 (81%), Gaps = 32/377 (8%)

Query: 1   MLRTLPIASPSSLTVSTYNKTSLPSQSSLKLSPFCVNNDGGNNISYCYSTSRRLALFQLG 60
           M+R +P+A+    ++S++   S  S+    LS F +              SR +    +G
Sbjct: 1   MVRIIPMATSFRPSLSSFG-FSTSSRLGFPLSTFNI--------------SRTVTSLHVG 45

Query: 61  AAIPQSHFFGAKALKLLRA-EGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVV 119
           +AIPQS  FG  A KLLR  EG+ +  + +GN+A  S +  ++NVL+WVK DKRRMLHVV
Sbjct: 46  SAIPQSQIFGLNASKLLRGGEGNAMGFNATGNIAHASTSAAQENVLEWVKKDKRRMLHVV 105

Query: 120 YRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYD 179
           YRVGDLD+TIKFYTECLGMKLLR+RDIPE+RYTNAFLGYGPEDSHFV+ELTYNYGVDKYD
Sbjct: 106 YRVGDLDRTIKFYTECLGMKLLRRRDIPEERYTNAFLGYGPEDSHFVIELTYNYGVDKYD 165

Query: 180 IGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG 239
           IG GFGHFGIAVEDV KTVDL+KAKGGKVTREPGPVKGG+TVIAFIEDPDGYKFELLERG
Sbjct: 166 IGAGFGHFGIAVEDVTKTVDLIKAKGGKVTREPGPVKGGSTVIAFIEDPDGYKFELLERG 225

Query: 240 PTPEPLCQVMLRVGDLDRAINFYK----------------KYTIAVMGYGPEDKNAVLEL 283
           PTPEPLCQVMLRVGDLDR+INFY+                KYTIA+MGYGPEDKNAVLEL
Sbjct: 226 PTPEPLCQVMLRVGDLDRSINFYEKAFGMELLRKRDNPEYKYTIAMMGYGPEDKNAVLEL 285

Query: 284 TYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPD 343
           TYN+GV+EYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITAC+DPD
Sbjct: 286 TYNYGVSEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACVDPD 345

Query: 344 GWKSVFVDNLDFLKELE 360
           GWKSVFVDN+DFLKEL+
Sbjct: 346 GWKSVFVDNIDFLKELD 362

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449443163|ref|XP_004139350.1| PREDICTED: probable lactoylglutathione lyase, chloroplast-like [Cucumis sativus]

 Score =  546 bits (1406), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 269/376 (71%), Positives = 311/376 (82%), Gaps = 30/376 (7%)

Query: 1   MLRTLPIASPSSLTVSTYNKTSLPSQSSLKLSPFCVNNDGGNNISYCYSTSRRLALFQLG 60
           M+R  P+AS S            PS S+ + + F   +  G ++S  ++T+RR+AL QLG
Sbjct: 1   MVRITPMASFSVR----------PSLSAFRFAGF---SRSGLSLS-SFNTTRRIALLQLG 46

Query: 61  AAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVY 120
           +A+PQS +FG KA  +LR EGS I  + +GN A  S + + +N+LDWVK DKRRMLHVVY
Sbjct: 47  SAVPQSQYFGLKAFDMLRGEGSNIGMTVAGNAAQASTSSSSENLLDWVKQDKRRMLHVVY 106

Query: 121 RVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDI 180
           RVGDLDKTIKFYTECLGMKLLRKRDIPE++YTNAFLG+GPEDSHFV+ELTYNYGVDKYDI
Sbjct: 107 RVGDLDKTIKFYTECLGMKLLRKRDIPEEKYTNAFLGFGPEDSHFVIELTYNYGVDKYDI 166

Query: 181 GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP 240
           GT FGHFGIAVEDV KTV+L+KAKGGKVTRE GPVKGG TVIAF+EDPDGYKFEL+ERGP
Sbjct: 167 GTAFGHFGIAVEDVYKTVELIKAKGGKVTREAGPVKGGRTVIAFVEDPDGYKFELIERGP 226

Query: 241 TPEPLCQVMLRVGDLDRAINFYK----------------KYTIAVMGYGPEDKNAVLELT 284
           TPEPLCQVMLRVGDLDR+I+FYK                KYTIA+MGYGPEDKNAV+ELT
Sbjct: 227 TPEPLCQVMLRVGDLDRSIDFYKKAYGMELLRKRDNPDYKYTIAMMGYGPEDKNAVMELT 286

Query: 285 YNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 344
           YN+GVT+Y+KGN YAQIAIGTDDVY+TAEA+KLSGGK+TREPGPLPGINTKITACLDPDG
Sbjct: 287 YNYGVTDYEKGNAYAQIAIGTDDVYRTAEAVKLSGGKVTREPGPLPGINTKITACLDPDG 346

Query: 345 WKSVFVDNLDFLKELE 360
           WK+VFVDN+DFLKELE
Sbjct: 347 WKTVFVDNVDFLKELE 362

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225429965|ref|XP_002283968.1| PREDICTED: probable lactoylglutathione lyase, chloroplast-like [Vitis vinifera]

 Score =  542 bits (1397), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 265/329 (80%), Positives = 286/329 (86%), Gaps = 18/329 (5%)

Query: 48  YSTSRRLALFQLGAAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDW 107
           +++SRRLALF LG AIPQS   G K LKL R EG+ +EA T+GNMA  +  V+E NVL+W
Sbjct: 38  FTSSRRLALFHLGTAIPQSELLGGKTLKLFRMEGNMLEAGTAGNMAQAA--VSEGNVLEW 95

Query: 108 VKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVV 167
            K+DKRRMLHVVYRVG+LDKT+KFYTECLGMKLLR+ DIPE+RY NAFLGYGPEDSHFVV
Sbjct: 96  AKTDKRRMLHVVYRVGNLDKTMKFYTECLGMKLLRRCDIPEERYANAFLGYGPEDSHFVV 155

Query: 168 ELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIED 227
           ELTYNYGVDK DIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGG TVIAF+ED
Sbjct: 156 ELTYNYGVDKIDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGKTVIAFVED 215

Query: 228 PDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYK----------------KYTIAVMG 271
           PDGYKFELLER PTPEPLCQVMLRVGDLDR+I FY+                KYTIA+MG
Sbjct: 216 PDGYKFELLEREPTPEPLCQVMLRVGDLDRSIKFYEKAFGMELLRKRDNPEYKYTIAMMG 275

Query: 272 YGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPG 331
           YGPEDK+AVLELTYN+GV EYDKGNGYAQIAIGTDDVYKTAEAI+L GGKITREPGPLP 
Sbjct: 276 YGPEDKSAVLELTYNYGVLEYDKGNGYAQIAIGTDDVYKTAEAIRLCGGKITREPGPLPV 335

Query: 332 INTKITACLDPDGWKSVFVDNLDFLKELE 360
           INTKITACLDPDGWKSVFVDN DFLKELE
Sbjct: 336 INTKITACLDPDGWKSVFVDNADFLKELE 364

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296081860|emb|CBI20865.3| unnamed protein product [Vitis vinifera]

 Score =  542 bits (1397), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 265/329 (80%), Positives = 286/329 (86%), Gaps = 18/329 (5%)

Query: 48  YSTSRRLALFQLGAAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDW 107
           +++SRRLALF LG AIPQS   G K LKL R EG+ +EA T+GNMA  +  V+E NVL+W
Sbjct: 33  FTSSRRLALFHLGTAIPQSELLGGKTLKLFRMEGNMLEAGTAGNMAQAA--VSEGNVLEW 90

Query: 108 VKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVV 167
            K+DKRRMLHVVYRVG+LDKT+KFYTECLGMKLLR+ DIPE+RY NAFLGYGPEDSHFVV
Sbjct: 91  AKTDKRRMLHVVYRVGNLDKTMKFYTECLGMKLLRRCDIPEERYANAFLGYGPEDSHFVV 150

Query: 168 ELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIED 227
           ELTYNYGVDK DIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGG TVIAF+ED
Sbjct: 151 ELTYNYGVDKIDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGKTVIAFVED 210

Query: 228 PDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYK----------------KYTIAVMG 271
           PDGYKFELLER PTPEPLCQVMLRVGDLDR+I FY+                KYTIA+MG
Sbjct: 211 PDGYKFELLEREPTPEPLCQVMLRVGDLDRSIKFYEKAFGMELLRKRDNPEYKYTIAMMG 270

Query: 272 YGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPG 331
           YGPEDK+AVLELTYN+GV EYDKGNGYAQIAIGTDDVYKTAEAI+L GGKITREPGPLP 
Sbjct: 271 YGPEDKSAVLELTYNYGVLEYDKGNGYAQIAIGTDDVYKTAEAIRLCGGKITREPGPLPV 330

Query: 332 INTKITACLDPDGWKSVFVDNLDFLKELE 360
           INTKITACLDPDGWKSVFVDN DFLKELE
Sbjct: 331 INTKITACLDPDGWKSVFVDNADFLKELE 359

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225445150|ref|XP_002284023.1| PREDICTED: probable lactoylglutathione lyase, chloroplast-like isoform 1 [Vitis vinifera]

 Score =  538 bits (1386), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 264/339 (77%), Positives = 291/339 (85%), Gaps = 23/339 (6%)

Query: 45  SYCYSTSRRLAL----FQLGA--AIPQSHFFGAKALKLLRA-EGSTIEASTSGNMAPTSN 97
           S+ +STS RL      F +    +IPQS  FG  A KLLR  EG+ +  + +GN+A  S 
Sbjct: 17  SFGFSTSSRLGFPLSTFNISRTLSIPQSQIFGLNASKLLRGGEGNAMGFNATGNIAHAST 76

Query: 98  TVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLG 157
           +  ++NVL+WVK DKRRMLHVVYRVGDLD+TIKFYTECLGMKLLR+RDIPE+RYTNAFLG
Sbjct: 77  SAAQENVLEWVKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRRRDIPEERYTNAFLG 136

Query: 158 YGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKG 217
           YGPEDSHFV+ELTYNYGVDKYDIG GFGHFGIAVEDV KTVDL+KAKGGKVTREPGPVKG
Sbjct: 137 YGPEDSHFVIELTYNYGVDKYDIGAGFGHFGIAVEDVTKTVDLIKAKGGKVTREPGPVKG 196

Query: 218 GNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYK-------------- 263
           G+TVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDR+INFY+              
Sbjct: 197 GSTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRSINFYEKAFGMELLRKRDNP 256

Query: 264 --KYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGK 321
             KYTIA+MGYGPEDKNAVLELTYN+GV+EYDKGNGYAQIAIGTDDVYKTAEAIKLSGGK
Sbjct: 257 EYKYTIAMMGYGPEDKNAVLELTYNYGVSEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGK 316

Query: 322 ITREPGPLPGINTKITACLDPDGWKSVFVDNLDFLKELE 360
           ITREPGPLPGINTKITAC+DPDGWKSVFVDN+DFLKEL+
Sbjct: 317 ITREPGPLPGINTKITACVDPDGWKSVFVDNIDFLKELD 355

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255550986|ref|XP_002516541.1| lactoylglutathione lyase, putative [Ricinus communis] gi|223544361|gb|EEF45882.1| lactoylglutathione lyase, putative [Ricinus communis]

 Score =  535 bits (1379), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 249/326 (76%), Positives = 288/326 (88%), Gaps = 16/326 (4%)

Query: 51  SRRLALFQLGAAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKS 110
           SRRLALFQLGAA+P+SH  G +A KLLR +G+T EASTS  MA  S  + EQNVL+WV +
Sbjct: 64  SRRLALFQLGAALPESHLLGGRASKLLRVDGNTSEASTSSKMASMSTALAEQNVLEWVSN 123

Query: 111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELT 170
           DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKR+IPE+RY+NAFLGYGPE+S+F VELT
Sbjct: 124 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRNIPEERYSNAFLGYGPEESNFTVELT 183

Query: 171 YNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDG 230
           YNYG+DKY+IG GFGHFGIAVEDV KTV+LVKAKGG++TR+ GPVKGG ++IA+++DPDG
Sbjct: 184 YNYGIDKYNIGNGFGHFGIAVEDVVKTVNLVKAKGGRITRDSGPVKGGGSIIAYVQDPDG 243

Query: 231 YKFELLERGPTPEPLCQVMLRVGDLDRAINFYK----------------KYTIAVMGYGP 274
           Y FELLERGPTPEPLCQVMLRVGDL+R++NFYK                KY++A+MGYGP
Sbjct: 244 YTFELLERGPTPEPLCQVMLRVGDLERSVNFYKKAFGLQLLRKRDDPESKYSVAIMGYGP 303

Query: 275 EDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINT 334
           EDKNAVLELTYN+G+TEY+KG+GYAQIAIGT+DVYK+AEAIKL GG+I REPGPLPGINT
Sbjct: 304 EDKNAVLELTYNYGITEYEKGDGYAQIAIGTNDVYKSAEAIKLCGGEIIREPGPLPGINT 363

Query: 335 KITACLDPDGWKSVFVDNLDFLKELE 360
           KITACLDPDGWKSVFVDN+DFL+ELE
Sbjct: 364 KITACLDPDGWKSVFVDNVDFLRELE 389

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255546389|ref|XP_002514254.1| lactoylglutathione lyase, putative [Ricinus communis] gi|223546710|gb|EEF48208.1| lactoylglutathione lyase, putative [Ricinus communis]

 Score =  531 bits (1368), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 260/323 (80%), Positives = 280/323 (86%), Gaps = 21/323 (6%)

Query: 59  LGAAIPQSHFFGAKAL-KLLRAEGST----IEASTSGNMAPTSNTVTEQNVLDWVKSDKR 113
           LG+A+PQSHFFG KA  K  R E ST    +  + +GNMA  S   ++++ L+W KSDKR
Sbjct: 47  LGSAVPQSHFFGLKATSKPWRGEISTSSSGLGVAATGNMAQASTFASQESALEWAKSDKR 106

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           RMLHVVYRVGDLD+TIKFYTECLGMKLLRKRDIPE+RYTNAFLGYGPEDSHFV+ELTYNY
Sbjct: 107 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEERYTNAFLGYGPEDSHFVIELTYNY 166

Query: 174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
           GVDKYDIGT FGHFGIAVEDVAKTV+L+KAKGGKVTREP PVKGG TVIAFIEDPDGYKF
Sbjct: 167 GVDKYDIGTAFGHFGIAVEDVAKTVELIKAKGGKVTREPAPVKGGKTVIAFIEDPDGYKF 226

Query: 234 ELLERGPTPEPLCQVMLRVGDLDRAINFYK----------------KYTIAVMGYGPEDK 277
           ELLERGPTPEPLCQVMLRVGDLDR+INFY+                KYTIA+MGYGPEDK
Sbjct: 227 ELLERGPTPEPLCQVMLRVGDLDRSINFYEKAFGMELLRKRDNPEYKYTIAMMGYGPEDK 286

Query: 278 NAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKIT 337
           NAVLELTYN+GVTEYDKGN YAQIAIGTDDVYKTAE IKL GGKITREPGPLPGINTKIT
Sbjct: 287 NAVLELTYNYGVTEYDKGNAYAQIAIGTDDVYKTAEGIKLFGGKITREPGPLPGINTKIT 346

Query: 338 ACLDPDGWKSVFVDNLDFLKELE 360
           ACLDPDGWKSVFVDN+DFLKELE
Sbjct: 347 ACLDPDGWKSVFVDNIDFLKELE 369

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224119744|ref|XP_002331150.1| predicted protein [Populus trichocarpa] gi|222873233|gb|EEF10364.1| predicted protein [Populus trichocarpa]

 Score =  529 bits (1362), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 268/377 (71%), Positives = 299/377 (79%), Gaps = 41/377 (10%)

Query: 1   MLRTLPIASPSSLTVSTYNKTSLPSQSSLKLSPFCVNNDGGNNISYCYSTSRRLALFQLG 60
           M+R +P+ S SS+  S+Y          L  S F   N          + SRR A   L 
Sbjct: 1   MVRIIPMVS-SSIRPSSY----------LTCSSFMFCN--------ACAPSRRFAY--LA 39

Query: 61  AAIPQSHFFGAKAL-KLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVV 119
            A+PQSHFFG KA  K+ R E  TI    +GNMA  S   T++++L+WVK DKRRMLHVV
Sbjct: 40  TAVPQSHFFGLKASSKIWRGESRTI---ATGNMAQASTAATQESLLEWVKKDKRRMLHVV 96

Query: 120 YRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYD 179
           YRVGDLD+TIKFYTECLGMKLLRKRDIPE+RYTNAFLGYGPEDSHFV+ELTYNYGVD YD
Sbjct: 97  YRVGDLDRTIKFYTECLGMKLLRKRDIPEERYTNAFLGYGPEDSHFVIELTYNYGVDSYD 156

Query: 180 IGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG 239
           IG GFGHFGIAVEDVAKTV+L+KAKGGKV REPGPVKGG+TVIAFIEDPDGYKFELLERG
Sbjct: 157 IGAGFGHFGIAVEDVAKTVELIKAKGGKVNREPGPVKGGSTVIAFIEDPDGYKFELLERG 216

Query: 240 PTPEPLCQVMLRVGDLDRAINFYK----------------KYTIAVMGYGPEDKNAVLEL 283
           PTPEPLCQVMLRVGDLDR+INFY+                KYTIA+MGYG EDKN VLEL
Sbjct: 217 PTPEPLCQVMLRVGDLDRSINFYEKAFGMKLLRKRDNPEYKYTIAMMGYGSEDKNCVLEL 276

Query: 284 TYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPD 343
           TYN+GVTEYDKGN YAQIAIGTDDVY+TAEA+++ GGK+TREPGPLPGINTKITACLDPD
Sbjct: 277 TYNYGVTEYDKGNAYAQIAIGTDDVYRTAEAVEIFGGKVTREPGPLPGINTKITACLDPD 336

Query: 344 GWKSVFVDNLDFLKELE 360
           GWK+VFVDN+DFLKELE
Sbjct: 337 GWKTVFVDNIDFLKELE 353

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217073098|gb|ACJ84908.1| unknown [Medicago truncatula] gi|388503182|gb|AFK39657.1| unknown [Medicago truncatula]

 Score =  528 bits (1359), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 256/377 (67%), Positives = 297/377 (78%), Gaps = 47/377 (12%)

Query: 1   MLRTLPIASPSSL-TVSTYNKTSLPSQSSLKLSPFCVNNDGGNNISYCYSTSRRLALFQL 59
           M+R +PIAS S L T+S +N+T                               R++    
Sbjct: 1   MVRVIPIASSSILPTLSLFNRTP------------------------------RISFSHF 30

Query: 60  GAAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVV 119
             A+PQSH FG KA +L +  G++++  +SGN++ +    + +NVL+WVK DKRRMLHVV
Sbjct: 31  STAVPQSHNFGLKACRLFKQNGNSLKVMSSGNVSSSVTAASPENVLEWVKQDKRRMLHVV 90

Query: 120 YRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYD 179
           YRVGDLD+TIKFYTECLGMKLLRKRDIPE+RYTNAFLGYGPEDSHFV+ELTYNYGVDKYD
Sbjct: 91  YRVGDLDRTIKFYTECLGMKLLRKRDIPEERYTNAFLGYGPEDSHFVIELTYNYGVDKYD 150

Query: 180 IGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG 239
           IGT FGHFGIAV+D+ KTV+L++AKGGK+TREPGPVKGG TVIAF+EDPDGYKFELLERG
Sbjct: 151 IGTAFGHFGIAVDDITKTVELIRAKGGKITREPGPVKGGKTVIAFVEDPDGYKFELLERG 210

Query: 240 PTPEPLCQVMLRVGDLDRAINFYK----------------KYTIAVMGYGPEDKNAVLEL 283
           PTPEPLCQVMLRVGDL+R+I FY+                KYTIA++GYGPEDK+ VLEL
Sbjct: 211 PTPEPLCQVMLRVGDLNRSIEFYEKVFGMELLRTRDNPDNKYTIAMLGYGPEDKSTVLEL 270

Query: 284 TYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPD 343
           TYN+GVTEYDKGN YAQIAIGTDDVYKTAEAIKLS GK+TREPGPLPGINTKITACLDPD
Sbjct: 271 TYNYGVTEYDKGNAYAQIAIGTDDVYKTAEAIKLSTGKLTREPGPLPGINTKITACLDPD 330

Query: 344 GWKSVFVDNLDFLKELE 360
           GWK+VFVDN+DFLKELE
Sbjct: 331 GWKTVFVDNIDFLKELE 347

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357520937|ref|XP_003630757.1| Lactoylglutathione lyase [Medicago truncatula] gi|355524779|gb|AET05233.1| Lactoylglutathione lyase [Medicago truncatula]

 Score =  527 bits (1358), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 256/377 (67%), Positives = 297/377 (78%), Gaps = 47/377 (12%)

Query: 1   MLRTLPIASPSSL-TVSTYNKTSLPSQSSLKLSPFCVNNDGGNNISYCYSTSRRLALFQL 59
           M+R +PIAS S L T+S +N+T                               R++    
Sbjct: 1   MVRVIPIASSSILPTLSLFNRTP------------------------------RISFSHF 30

Query: 60  GAAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVV 119
             A+PQSH FG KA +L +  G++++  +SGN++ +    + +NVL+WVK DKRRMLHVV
Sbjct: 31  STAVPQSHNFGLKACRLFKQNGNSLKVMSSGNVSSSVTAASPENVLEWVKQDKRRMLHVV 90

Query: 120 YRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYD 179
           YRVGDLD+TIKFYTECLGMKLLRKRDIPE+RYTNAFLGYGPEDSHFV+ELTYNYGVDKYD
Sbjct: 91  YRVGDLDRTIKFYTECLGMKLLRKRDIPEERYTNAFLGYGPEDSHFVIELTYNYGVDKYD 150

Query: 180 IGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG 239
           IGT FGHFGIAV+D+ KTV+L++AKGGK+TREPGPVKGG TVIAF+EDPDGYKFELLERG
Sbjct: 151 IGTAFGHFGIAVDDITKTVELIRAKGGKITREPGPVKGGKTVIAFVEDPDGYKFELLERG 210

Query: 240 PTPEPLCQVMLRVGDLDRAINFYK----------------KYTIAVMGYGPEDKNAVLEL 283
           PTPEPLCQVMLRVGDL+R+I FY+                KYTIA++GYGPEDK+ VLEL
Sbjct: 211 PTPEPLCQVMLRVGDLNRSIEFYEKAFGMELLRTRDNPDNKYTIAMLGYGPEDKSTVLEL 270

Query: 284 TYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPD 343
           TYN+GVTEYDKGN YAQIAIGTDDVYKTAEAIKLS GK+TREPGPLPGINTKITACLDPD
Sbjct: 271 TYNYGVTEYDKGNAYAQIAIGTDDVYKTAEAIKLSTGKLTREPGPLPGINTKITACLDPD 330

Query: 344 GWKSVFVDNLDFLKELE 360
           GWK+VFVDN+DFLKELE
Sbjct: 331 GWKTVFVDNIDFLKELE 347

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	360
TAIR|locus:2019574	350	AT1G67280 [Arabidopsis thalian	0.863	0.888	0.75	1e-130
UNIPROTKB|P0AC81	135	gloA "GloA" [Escherichia coli	0.344	0.918	0.588	7.8e-39
UNIPROTKB|Q9KT93	138	gloA "Probable lactoylglutathi	0.344	0.898	0.588	1e-36
TIGR_CMR|VC_1010	138	VC_1010 "lactoylglutathione ly	0.344	0.898	0.588	1e-36
DICTYBASE|DDB_G0291265	136	gloA "glyoxylase I" [Dictyoste	0.344	0.911	0.572	2.1e-36
TIGR_CMR|SO_2044	136	SO_2044 "lactoylglutathione ly	0.344	0.911	0.552	2.4e-35
ZFIN|ZDB-GENE-040912-38	298	glod4 "glyoxalase domain conta	0.636	0.768	0.330	6.1e-23
FB|FBgn0031143	293	CG1532 [Drosophila melanogaste	0.655	0.805	0.313	1.6e-22
UNIPROTKB|E3N6P2	281	Cre-glod-4 "CRE-GLOD-4 protein	0.627	0.804	0.292	3e-21
UNIPROTKB|A8XX92	281	glod-4 "Glyoxalase 1" [Caenorh	0.627	0.804	0.303	6.3e-21

TAIR|locus:2019574 AT1G67280 [Arabidopsis thaliana (taxid:3702)]

 Score = 1282 (456.3 bits), Expect = 1.0e-130, P = 1.0e-130
 Identities = 252/336 (75%), Positives = 277/336 (82%)

Query:    47 CYSTSRRLALFQLGAA------IPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVT 100
             C+S S R  +  L         +PQS  FG  + KLLR   + +  + SG  A  +   T
Sbjct:    18 CFSDSPRFPISLLSRNLSRTLHVPQSQLFGLTSHKLLRRSVNCLGVAESGKAAQAT---T 74

Query:   101 EQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGP 160
             + ++L WVK+DKRRMLHVVYRVGD+D+TIKFYTECLGMKLLRKRDIPE++YTNAFLGYGP
Sbjct:    75 QDDLLTWVKNDKRRMLHVVYRVGDMDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGP 134

Query:   161 EDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNT 220
             EDSHFV+ELTYNYGVDKYDIG GFGHFGIAV+DVAKTV+LVKAKGGKV+REPGPVKGG T
Sbjct:   135 EDSHFVIELTYNYGVDKYDIGAGFGHFGIAVDDVAKTVELVKAKGGKVSREPGPVKGGKT 194

Query:   221 VIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKK---------------- 264
             VIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAI FY+K                
Sbjct:   195 VIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAIKFYEKAFGMELLRTRDNPEYK 254

Query:   265 YTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITR 324
             YTIA+MGYGPEDK  VLELTYN+GVTEYDKGN YAQIAIGTDDVYKTAEAIKL GGKITR
Sbjct:   255 YTIAMMGYGPEDKFPVLELTYNYGVTEYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKITR 314

Query:   325 EPGPLPGINTKITACLDPDGWKSVFVDNLDFLKELE 360
             EPGPLPGI+TKITACLDPDGWKSVFVDN+DFLKELE
Sbjct:   315 EPGPLPGISTKITACLDPDGWKSVFVDNIDFLKELE 350

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA;ISS

GO:0005739 "mitochondrion" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0046872 "metal ion binding" evidence=IEA

GO:0031977 "thylakoid lumen" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0009409 "response to cold" evidence=IEP

GO:0010319 "stromule" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0019243 "methylglyoxal catabolic process to D-lactate" evidence=RCA

UNIPROTKB|P0AC81 gloA "GloA" [Escherichia coli K-12 (taxid:83333)]

 Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
 Identities = 73/124 (58%), Positives = 97/124 (78%)

Query:   114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
             R+LH + RVGDL ++I FYT+ LGMKLLR  + PE +Y+ AF+GYGPE    V+ELTYN+
Sbjct:     2 RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query:   174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
             GVDKY++GT +GH  ++V++ A+  + ++  GG VTRE GPVKGG TVIAF+EDPDGYK 
Sbjct:    62 GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query:   234 ELLE 237
             EL+E
Sbjct:   122 ELIE 125

GO:0016151 "nickel cation binding" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA;IDA

GO:0019243 "methylglyoxal catabolic process to D-lactate" evidence=IMP

UNIPROTKB|Q9KT93 gloA "Probable lactoylglutathione lyase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
 Identities = 73/124 (58%), Positives = 92/124 (74%)

Query:   114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
             R+LH + RVGDLDK+I+FYT+ +GM LLRK +  E +YT AFLGYG E    V+ELTYN+
Sbjct:     5 RILHTMLRVGDLDKSIEFYTQVMGMSLLRKNENTEYKYTLAFLGYGDESQGAVIELTYNW 64

Query:   174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
             GV  Y+ G  +GH  I V+D+  T D +KA GG VTREPGPVKGG T IAF++DPDGY  
Sbjct:    65 GVADYEKGNAYGHIAIGVDDIYATCDTIKAAGGIVTREPGPVKGGTTHIAFVKDPDGYMI 124

Query:   234 ELLE 237
             EL++
Sbjct:   125 ELIQ 128

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0006749 "glutathione metabolic process" evidence=ISS

TIGR_CMR|VC_1010 VC_1010 "lactoylglutathione lyase" [Vibrio cholerae O1 biovar El Tor (taxid:686)]

 Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
 Identities = 73/124 (58%), Positives = 92/124 (74%)

Query:   114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
             R+LH + RVGDLDK+I+FYT+ +GM LLRK +  E +YT AFLGYG E    V+ELTYN+
Sbjct:     5 RILHTMLRVGDLDKSIEFYTQVMGMSLLRKNENTEYKYTLAFLGYGDESQGAVIELTYNW 64

Query:   174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
             GV  Y+ G  +GH  I V+D+  T D +KA GG VTREPGPVKGG T IAF++DPDGY  
Sbjct:    65 GVADYEKGNAYGHIAIGVDDIYATCDTIKAAGGIVTREPGPVKGGTTHIAFVKDPDGYMI 124

Query:   234 ELLE 237
             EL++
Sbjct:   125 ELIQ 128

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0006749 "glutathione metabolic process" evidence=ISS

DICTYBASE|DDB_G0291265 gloA "glyoxylase I" [Dictyostelium discoideum (taxid:44689)]

 Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
 Identities = 71/124 (57%), Positives = 96/124 (77%)

Query:   114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
             R+LH + RVG+L+K+++FY + LGMKLLRK +  E +YT AF+GY  ED + V+ELTYN+
Sbjct:     3 RILHTMLRVGNLEKSLQFYIDVLGMKLLRKSENVEYKYTLAFVGYTNEDENAVIELTYNW 62

Query:   174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
             GV+KY++GT FGH  I V+DV +TV+ ++  GGKV RE  PV GG TVIAF+EDPD YK 
Sbjct:    63 GVEKYELGTAFGHIAIGVDDVYETVERIRKSGGKVAREAAPVLGGTTVIAFVEDPDNYKI 122

Query:   234 ELLE 237
             EL++
Sbjct:   123 ELIQ 126

GO:0046872 "metal ion binding" evidence=IEA

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA;ISS

GO:0005575 "cellular_component" evidence=ND

GO:0006749 "glutathione metabolic process" evidence=ISS

GO:0016829 "lyase activity" evidence=IEA

TIGR_CMR|SO_2044 SO_2044 "lactoylglutathione lyase" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
 Identities = 69/125 (55%), Positives = 93/125 (74%)

Query:   114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDS-HFVVELTYN 172
             ++LH + RVG+L+++I FYT+ LGMKLLR  + PE +Y+ AF+GYG E +   V+ELTYN
Sbjct:     3 QLLHTMIRVGNLERSIAFYTQVLGMKLLRTSENPEYKYSLAFVGYGEESTGQAVIELTYN 62

Query:   173 YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 232
             +G +KYD+GTGFGH  I  +D+    + + A GGKVTR PGPV GG T IAF+EDPDGYK
Sbjct:    63 WGTEKYDLGTGFGHIAIGDDDIYARCEAIAAAGGKVTRAPGPVAGGTTEIAFVEDPDGYK 122

Query:   233 FELLE 237
              E ++
Sbjct:   123 IEFIQ 127

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

ZFIN|ZDB-GENE-040912-38 glod4 "glyoxalase domain containing 4" [Danio rerio (taxid:7955)]

 Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
 Identities = 90/272 (33%), Positives = 130/272 (47%)

Query:   113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDI----------PED-RYTNAFLGYGPE 161
             +R LH V++VGD  KT  FY + LGMK+LR  +           P D +++   +G+GPE
Sbjct:     4 KRALHFVFKVGDRTKTATFYRDVLGMKILRHEEFEEGCKATCNGPYDGKWSKTMVGFGPE 63

Query:   162 DSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTV 221
             D HFV ELTYNYGV +Y +G  F   G+ ++  A+ V   K     +T+       G+ +
Sbjct:    64 DDHFVAELTYNYGVGEYRLGNDF--LGLTLQS-AQAVSNAKRLNWPLTQV------GDCL 114

Query:   222 IAFIEDPDGYKFELLERG-PTPEPLCQVMLRVGDLDRAINFY------------KKYTIA 268
                 E P GY+F L+++  P  +P+ +V L V DL R+++++            +   IA
Sbjct:   115 Y-MTEAPGGYRFYLIDKEQPNSDPVQKVSLAVSDLQRSVHYWSGLLGMKVIEKNEDKKIA 173

Query:   269 VMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD-DVYKTAEAI-KLSGGKITREP 326
             VMG+   D    LEL    G    D G  + +IA     D     EA+ K    KI    
Sbjct:   174 VMGFS--DNQCKLELQDIGGAV--DHGTAFGRIAFACPRDQLPDIEALMKKDSEKIITPL 229

Query:   327 GPL--PGINTKITACL-DPDGWKSVFVDNLDF 355
               L  PG  T     L DPDG +  FV +  F
Sbjct:   230 VSLDTPGKATVEVVILGDPDGHEICFVGDEAF 261

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

FB|FBgn0031143 CG1532 [Drosophila melanogaster (taxid:7227)]

 Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
 Identities = 86/274 (31%), Positives = 129/274 (47%)

Query:   114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE-----------DRYTNAFLGYGPED 162
             R LH V+++GD  K   F+ + LGM +LR  +  E           +R++   +GYGPE 
Sbjct:    12 RALHYVFKIGDRAKNAFFFRQILGMTVLRHEEFKEGCDAACNGPYDNRWSKTMVGYGPES 71

Query:   163 SHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVI 222
             SHFV+ELTYNYGV  Y++G  FG   I  +D+   +         VT+  G  K G+   
Sbjct:    72 SHFVIELTYNYGVSSYEMGNDFGGVTIHSKDI---LSRAAEHSYPVTQVSG--KAGS--- 123

Query:   223 AFIEDPDGYKFELLERGP-TPEPLCQVMLRVGDLDRAINFY---------KKYTIAV-MG 271
               +  PDGYKF ++++   + +P+  V L V +L  +  ++         ++   +V + 
Sbjct:   124 -LLTSPDGYKFYVIDQASASSDPVQSVELNVSNLQNSRKYWHDLLQLKVLEENEASVRLS 182

Query:   272 YGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPL-- 329
             YG  ++ A LE+T         K  G    AI         EA+K +GG I      L  
Sbjct:   183 YG--EQQASLEITQISEPINRAKAYGRIAFAIPAAQQPPLQEAVKAAGGAILTPLITLDT 240

Query:   330 PGINTKITACL-DPDGWKSVFVDNLDF--LKELE 360
             PG  T     L DPDG +  FVD   F  L ++E
Sbjct:   241 PGKATVTVVILGDPDGHEICFVDEEGFGQLSQVE 274

GO:0022008 "neurogenesis" evidence=IMP

UNIPROTKB|E3N6P2 Cre-glod-4 "CRE-GLOD-4 protein" [Caenorhabditis remanei (taxid:31234)]

 Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
 Identities = 78/267 (29%), Positives = 129/267 (48%)

Query:   114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDI----------PED-RYTNAFLGYGPED 162
             R LH V++V +  KTI FYT+ L MK+LR  +           P D R++   +GYG ED
Sbjct:     4 RALHYVFKVANRAKTIDFYTKVLDMKVLRHEEFDKGCEASCNGPYDERWSKTMIGYGSED 63

Query:   163 SHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVI 222
              HFV+ELTYNY + KY++G  +    I  + + + +  +  +           K G   +
Sbjct:    64 EHFVLELTYNYPIHKYELGNDYRAIVIDSDQLFEKISTIDHR-----------KSGCGRL 112

Query:   223 AFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDKNAVLE 282
             A ++DPDG++F++ +   +P  L +V L VGDL+++  ++ +  +  M    E+K   + 
Sbjct:   113 A-VKDPDGHEFKIGKSDQSPRVL-RVQLNVGDLEKSKKYWNE--VLEMPI-VEEKKTRIR 167

Query:   283 LTYNHGVTEY---------DKGNGYAQIAIGT--DDVYKTAEAIKLSGGKITREPGPL-- 329
             L Y  G  E          D+  G+ +IA     D +    + +K + G I  E   L  
Sbjct:   168 LCYGEGQCELEIVQSGEKIDRKTGFGRIAFSYPGDKLQSLQDKVKAANGTIINELLTLNT 227

Query:   330 PG-INTKITACLDPDGWKSVFVDNLDF 355
             PG  + ++    DPD  +  FV +  F
Sbjct:   228 PGKADVQVVILADPDAHEICFVGDEGF 254

GO:0008340 "determination of adult lifespan" evidence=ISS

GO:0009438 "methylglyoxal metabolic process" evidence=ISS

UNIPROTKB|A8XX92 glod-4 "Glyoxalase 1" [Caenorhabditis briggsae (taxid:6238)]

 Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
 Identities = 81/267 (30%), Positives = 131/267 (49%)

Query:   114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDI----------PED-RYTNAFLGYGPED 162
             R LH V++V +  KTI FYT+ L MK+LR  +           P D R++   +GYG ED
Sbjct:     4 RALHYVFKVANRAKTIDFYTKILEMKVLRHEEFDKGCEASCNGPYDERWSKTMIGYGSED 63

Query:   163 SHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVI 222
              HFV+ELTYNY + KY++G  +    I ++      D +  K  ++       K G   +
Sbjct:    64 EHFVLELTYNYPIHKYELGNDYR--AIVIDS-----DQLFDKISRIDHR----KSGCGRL 112

Query:   223 AFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDKNAVLE 282
             A ++DPDG++F++ +    P+ L +V L VGDL+++  ++ +  +  MG   E K  V  
Sbjct:   113 A-VKDPDGHEFKIGKADHAPKVL-RVQLNVGDLEKSKKYWNE--LLGMGIVEEKKTRV-R 167

Query:   283 LTYNHGVTEY---------DKGNGYAQIAIGT--DDVYKTAEAIKLSGGKITREPGPL-- 329
             L++  G  E          D+  G+ +IA     + +    + IK + G I  E   L  
Sbjct:   168 LSFGEGQCELEIVQSGEKIDRKTGFGRIAFSLPGEKLQPLQDKIKSANGTIINELLTLKT 227

Query:   330 PG-INTKITACLDPDGWKSVFVDNLDF 355
             PG  + ++    DPD  +  FV +  F
Sbjct:   228 PGKADVQVVILADPDAHEICFVGDEGF 254

GO:0008340 "determination of adult lifespan" evidence=ISS

GO:0009438 "methylglyoxal metabolic process" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8W593	LGUC_ARATH	4, ., 4, ., 1, ., 5	0.75	0.8638	0.8885	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	4.4.1	LOW CONFIDENCE prediction!
4th Layer	4.4.1.5	0.946
3rd Layer	2.5.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	eugene3.01570036	lactoylglutathione lyase (EC-4.4.1.5) (356 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	estExt_fgenesh4_pg.C_1250018	hydroxyacylglutathione hydrolase (EC-3.1.2.6) (259 aa)						•	•		0.907
	gw1.XI.471.1	tryptophan synthase, beta chain (EC-4.2.1.20) (398 aa)						•			0.800
	gw1.XI.1757.1	tryptophan synthase, beta chain (EC-4.2.1.20) (378 aa)						•			0.800
	gw1.123.110.1	hypothetical protein (461 aa)						•			0.800
	fgenesh4_pg.C_LG_XIII000422	tryptophan synthase, beta chain (EC-4.2.1.20) (410 aa)						•			0.800
	eugene3.00120775	hypothetical protein (752 aa)						•			0.800
	estExt_fgenesh4_pg.C_LG_XV0575	hypothetical protein (700 aa)						•			0.800
	estExt_fgenesh4_pg.C_LG_V1322	tryptophan synthase (EC-4.2.1.20) (310 aa)						•			0.800
	estExt_fgenesh4_pg.C_LG_II0422	SubName- Full=Putative uncharacterized protein; (310 aa)						•			0.800
	estExt_fgenesh4_pg.C_280257	threonine deaminase (EC-4.3.1.19) (543 aa)						•			0.800

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	360
PLN02300	286	PLN02300, PLN02300, lactoylglutathione lyase	0.0
TIGR00068	150	TIGR00068, glyox_I, lactoylglutathione lyase	8e-85
cd07233	121	cd07233, Glyoxalase_I, Glyoxalase I catalyzes the	8e-59
PRK10291	129	PRK10291, PRK10291, glyoxalase I; Provisional	1e-47
TIGR00068	150	TIGR00068, glyox_I, lactoylglutathione lyase	7e-38
pfam00903	120	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resist	4e-31
cd08358	127	cd08358, Glo_EDI_BRP_like_21, This conserved domai	4e-28
PRK10291	129	PRK10291, PRK10291, glyoxalase I; Provisional	2e-27
cd07233	121	cd07233, Glyoxalase_I, Glyoxalase I catalyzes the	5e-27
cd06587	110	cd06587, Glo_EDI_BRP_like, This domain superfamily	8e-24
PLN03042	185	PLN03042, PLN03042, Lactoylglutathione lyase; Prov	3e-18
PLN02367	233	PLN02367, PLN02367, lactoylglutathione lyase	4e-17
COG0346	138	COG0346, GloA, Lactoylglutathione lyase and relate	1e-15
pfam00903	120	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resist	2e-14
pfam12681	109	pfam12681, Glyoxalase_2, Glyoxalase-like domain	2e-14
cd08358	127	cd08358, Glo_EDI_BRP_like_21, This conserved domai	1e-09
cd07247	114	cd07247, SgaA_N_like, N-terminal domain of Strepto	4e-09
cd07249	128	cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)	5e-09
cd07242	128	cd07242, Glo_EDI_BRP_like_6, This conserved domain	7e-09
cd06587	110	cd06587, Glo_EDI_BRP_like, This domain superfamily	1e-08
pfam13669	110	pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resi	1e-08
cd07245	114	cd07245, Glo_EDI_BRP_like_9, This conserved domain	1e-08
COG3324	127	COG3324, COG3324, Predicted enzyme related to lact	1e-08
cd08346	126	cd08346, PcpA_N_like, N-terminal domain of Sphingo	3e-08
cd07262	123	cd07262, Glo_EDI_BRP_like_19, This conserved domai	3e-08
TIGR02295	294	TIGR02295, HpaD, 3,4-dihydroxyphenylacetate 2,3-di	4e-08
cd08362	120	cd08362, BphC5-RrK37_N_like, N-terminal, non-catal	2e-07
pfam12681	109	pfam12681, Glyoxalase_2, Glyoxalase-like domain	1e-06
COG3324	127	COG3324, COG3324, Predicted enzyme related to lact	2e-06
cd07267	113	cd07267, THT_Oxygenase_N, N-terminal domain of 2,4	3e-06
cd08348	134	cd08348, BphC2-C3-RGP6_C_like, The single-domain 2	4e-06
TIGR03081	128	TIGR03081, metmalonyl_epim, methylmalonyl-CoA epim	8e-06
cd08354	122	cd08354, Glo_EDI_BRP_like_13, This conserved domai	2e-05
cd08349	112	cd08349, BLMA_like, Bleomycin binding protein (BLM	2e-05
cd07251	120	cd07251, Glo_EDI_BRP_like_10, This conserved domai	2e-05
cd07263	120	cd07263, Glo_EDI_BRP_like_16, This conserved domai	3e-05
cd07253	125	cd07253, Glo_EDI_BRP_like_2, This conserved domain	3e-05
cd08345	113	cd08345, Fosfomycin_RP, Fosfomycin resistant prote	3e-05
cd07254	120	cd07254, Glo_EDI_BRP_like_20, This conserved domai	5e-05
cd07255	125	cd07255, Glo_EDI_BRP_like_12, This conserved domai	5e-05
cd08360	134	cd08360, MhqB_like_C, C-terminal domain of Burkhol	7e-05
cd08352	125	cd08352, Glo_EDI_BRP_like_1, This conserved domain	8e-05
TIGR02295	294	TIGR02295, HpaD, 3,4-dihydroxyphenylacetate 2,3-di	1e-04
cd07244	121	cd07244, FosA, FosA, a Fosfomycin resistance prote	1e-04
cd07237	154	cd07237, BphC1-RGP6_C_like, C-terminal domain of 2	1e-04
PLN02367	233	PLN02367, PLN02367, lactoylglutathione lyase	2e-04
cd08343	131	cd08343, ED_TypeI_classII_C, C-terminal domain of	2e-04
cd07247	114	cd07247, SgaA_N_like, N-terminal domain of Strepto	3e-04
cd07262	123	cd07262, Glo_EDI_BRP_like_19, This conserved domai	4e-04
cd08342	136	cd08342, HPPD_N_like, N-terminal domain of 4-hydro	4e-04
cd07266	121	cd07266, HPCD_N_class_II, N-terminal domain of 3,4	4e-04
PLN03042	185	PLN03042, PLN03042, Lactoylglutathione lyase; Prov	0.001
TIGR01263	353	TIGR01263, 4HPPD, 4-hydroxyphenylpyruvate dioxygen	0.001
TIGR03211	303	TIGR03211, catechol_2_3, catechol 2,3 dioxygenase	0.002
cd07239	144	cd07239, BphC5-RK37_C_like, C-terminal, catalytic,	0.003
pfam13669	110	pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resi	0.004

>gnl|CDD|215169 PLN02300, PLN02300, lactoylglutathione lyase

 Score =  558 bits (1440), Expect = 0.0
 Identities = 232/286 (81%), Positives = 252/286 (88%), Gaps = 16/286 (5%)

Query: 91  NMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDR 150
             A  S     +++L+W K DKRRMLHVVYRVGDLD+TIKFYTECLGMKLLRKRDIPE++
Sbjct: 1   ASAAASTAAEAEDLLEWPKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEK 60

Query: 151 YTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTR 210
           YTNAFLGYGPEDS+FVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTV+LVKAKGGKVTR
Sbjct: 61  YTNAFLGYGPEDSNFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVELVKAKGGKVTR 120

Query: 211 EPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKK------ 264
           EPGPVKGG +VIAF++DPDGYKFEL++RGPTPEPLCQVMLRVGDLDR+I FY+K      
Sbjct: 121 EPGPVKGGKSVIAFVKDPDGYKFELIQRGPTPEPLCQVMLRVGDLDRSIKFYEKAFGMKL 180

Query: 265 ----------YTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEA 314
                     YTIA+MGYGPEDK  VLELTYN+GVTEY KGN YAQIAIGTDDVYKTAEA
Sbjct: 181 LRKRDNPEYKYTIAMMGYGPEDKTTVLELTYNYGVTEYTKGNAYAQIAIGTDDVYKTAEA 240

Query: 315 IKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFLKELE 360
           IKL GGKITREPGPLPGINTKITACLDPDGWK+VFVDN+DFLKELE
Sbjct: 241 IKLVGGKITREPGPLPGINTKITACLDPDGWKTVFVDNIDFLKELE 286

Length = 286

>gnl|CDD|232807 TIGR00068, glyox_I, lactoylglutathione lyase

 Score =  253 bits (647), Expect = 8e-85
 Identities = 87/141 (61%), Positives = 107/141 (75%)

Query: 107 WVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFV 166
             K+ KRR+LH + RVGDLDK++ FYTE LGMKLLRKRD PE +++ AFLGYG E S  V
Sbjct: 10  DPKTKKRRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSAAV 69

Query: 167 VELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIE 226
           +ELT+N+G +KYD+G GFGH  I V+DV K  + V+A GG V REPGPVKGG TVIAF+E
Sbjct: 70  IELTHNWGTEKYDLGNGFGHIAIGVDDVYKACERVRALGGNVVREPGPVKGGTTVIAFVE 129

Query: 227 DPDGYKFELLERGPTPEPLCQ 247
           DPDGYK EL++R  T + L  
Sbjct: 130 DPDGYKIELIQRKSTKDGLGN 150

Lactoylglutathione lyase is also known as aldoketomutase and glyoxalase I. Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits This model twice [Central intermediary metabolism, Amino sugars, Energy metabolism, Other]. Length = 150

>gnl|CDD|176659 cd07233, Glyoxalase_I, Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

 Score =  185 bits (473), Expect = 8e-59
 Identities = 62/123 (50%), Positives = 82/123 (66%), Gaps = 3/123 (2%)

Query: 115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYG 174
            LH + RV DL+K++ FYT+ LGMKLLR++D PE ++T  FLGY  EDS  V+ELTYN+G
Sbjct: 1   FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWG 60

Query: 175 VD-KYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
            +  YD G GFGH   AV+DV    + ++  G +VT+ PG        IAFI+DPDGY  
Sbjct: 61  TEEPYDNGNGFGHLAFAVDDVYAACERLEEMGVEVTKPPGDGGMKG--IAFIKDPDGYWI 118

Query: 234 ELL 236
           EL+
Sbjct: 119 ELI 121

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic glyoxalase I uses nickel. However, eukaryotic Trypanosomatid parasites also use nickel as a cofactor, which could possibly be explained by acquiring their GLOI gene by horizontal gene transfer. Human glyoxalase I is a two-domain enzyme and it has the structure of a domain-swapped dimer with two active sites located at the dimer interface. In yeast, in various plants, insects and Plasmodia, glyoxalase I is four-domain, possibly the result of a further gene duplication and an additional gene fusing event. Length = 121

>gnl|CDD|182358 PRK10291, PRK10291, glyoxalase I; Provisional

 Score =  157 bits (398), Expect = 1e-47
 Identities = 70/117 (59%), Positives = 91/117 (77%)

Query: 121 RVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDI 180
           RVGDL ++I FYT  LGMKLLR  + PE +Y+ AF+GYGPE    V+ELTYN+GVDKY++
Sbjct: 3   RVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYEL 62

Query: 181 GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE 237
           GT +GH  ++V++ A+  + ++  GG VTRE GPVKGG TVIAF+EDPDGYK EL+E
Sbjct: 63  GTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIE 119

Length = 129

>gnl|CDD|232807 TIGR00068, glyox_I, lactoylglutathione lyase

 Score =  132 bits (334), Expect = 7e-38
 Identities = 54/124 (43%), Positives = 72/124 (58%), Gaps = 16/124 (12%)

Query: 245 LCQVMLRVGDLDRAINFYK----------------KYTIAVMGYGPEDKNAVLELTYNHG 288
           L   MLRVGDLD++++FY                 K+++A +GYG E   AV+ELT+N G
Sbjct: 18  LLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSAAVIELTHNWG 77

Query: 289 VTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSV 348
             +YD GNG+  IAIG DDVYK  E ++  GG + REPGP+ G  T I    DPDG+K  
Sbjct: 78  TEKYDLGNGFGHIAIGVDDVYKACERVRALGGNVVREPGPVKGGTTVIAFVEDPDGYKIE 137

Query: 349 FVDN 352
            +  
Sbjct: 138 LIQR 141

Lactoylglutathione lyase is also known as aldoketomutase and glyoxalase I. Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits This model twice [Central intermediary metabolism, Amino sugars, Energy metabolism, Other]. Length = 150

>gnl|CDD|216182 pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score =  114 bits (286), Expect = 4e-31
 Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 8/125 (6%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           R+ HV  RVGDL+K++ FYT+ LG KL+ + D  E    +AF          V+EL  N 
Sbjct: 1   RIDHVALRVGDLEKSLDFYTDVLGFKLVEEVDDGEGPLRSAFF----TAGGRVLELLLNE 56

Query: 174 GVDKYDIGT---GFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDG 230
                  G           +V+DV    D +KA G ++ REPG    G     +  DPDG
Sbjct: 57  TPPPAAAGFGGHHIAFIAFSVDDVDAAYDRLKAAGVEIVREPGRHGWGGRYS-YFRDPDG 115

Query: 231 YKFEL 235
              EL
Sbjct: 116 NLIEL 120

Length = 120

>gnl|CDD|176706 cd08358, Glo_EDI_BRP_like_21, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score =  106 bits (266), Expect = 4e-28
 Identities = 51/137 (37%), Positives = 72/137 (52%), Gaps = 21/137 (15%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDI----------PED-RYTNAFLGYGPE 161
           RR LH V++VG+ +KTIKFY E LGMK+LR  +           P D +++   +GYGPE
Sbjct: 1   RRALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPE 60

Query: 162 DSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTV 221
           D HFVVELTYNYG+  Y++G  F    I  +                 +   PV      
Sbjct: 61  DDHFVVELTYNYGIGDYELGNDFLGITIHSKQAVS----------NAKKHNWPVTEVEDG 110

Query: 222 IAFIEDPDGYKFELLER 238
           +  ++ P GYKF L+++
Sbjct: 111 VYEVKAPGGYKFYLIDK 127

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 127

>gnl|CDD|182358 PRK10291, PRK10291, glyoxalase I; Provisional

 Score =  104 bits (261), Expect = 2e-27
 Identities = 52/122 (42%), Positives = 71/122 (58%), Gaps = 16/122 (13%)

Query: 249 MLRVGDLDRAINFYK----------------KYTIAVMGYGPEDKNAVLELTYNHGVTEY 292
           MLRVGDL R+I+FY                 KY++A +GYGPE + AV+ELTYN GV +Y
Sbjct: 1   MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKY 60

Query: 293 DKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN 352
           + G  Y  IA+  D+  +  E I+ +GG +TRE GP+ G  T I    DPDG+K   ++ 
Sbjct: 61  ELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEE 120

Query: 353 LD 354
            D
Sbjct: 121 KD 122

Length = 129

>gnl|CDD|176659 cd07233, Glyoxalase_I, Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

 Score =  102 bits (258), Expect = 5e-27
 Identities = 44/115 (38%), Positives = 59/115 (51%), Gaps = 19/115 (16%)

Query: 247 QVMLRVGDLDRAINFYK----------------KYTIAVMGYGPEDKNAVLELTYNHGVT 290
             MLRV DL+++++FY                 K+T+  +GY  ED   VLELTYN G  
Sbjct: 3   HTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWGTE 62

Query: 291 E-YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 344
           E YD GNG+  +A   DDVY   E ++  G ++T+ PG   G    I    DPDG
Sbjct: 63  EPYDNGNGFGHLAFAVDDVYAACERLEEMGVEVTKPPG--DGGMKGIAFIKDPDG 115

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic glyoxalase I uses nickel. However, eukaryotic Trypanosomatid parasites also use nickel as a cofactor, which could possibly be explained by acquiring their GLOI gene by horizontal gene transfer. Human glyoxalase I is a two-domain enzyme and it has the structure of a domain-swapped dimer with two active sites located at the dimer interface. In yeast, in various plants, insects and Plasmodia, glyoxalase I is four-domain, possibly the result of a further gene duplication and an additional gene fusing event. Length = 121

>gnl|CDD|211348 cd06587, Glo_EDI_BRP_like, This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

 Score = 94.0 bits (234), Expect = 8e-24
 Identities = 36/119 (30%), Positives = 51/119 (42%), Gaps = 9/119 (7%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD 176
           HV   V DL+  + FY + LG ++L +     +    AFL  G       +EL +     
Sbjct: 1   HVGLTVPDLEAAVAFYEDVLGFEVLERDGGGAEF---AFLRLG----GTRLEL-FEGDEP 52

Query: 177 KYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL 235
               G G  H    V+DV   V+ +KA G ++   P     G  V A+  DPDG   EL
Sbjct: 53  APPSGGGGVHLAFEVDDVDAAVERLKAAGVEILGGPREEPWGGRV-AYFRDPDGNLIEL 110

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases. Length = 110

>gnl|CDD|215548 PLN03042, PLN03042, Lactoylglutathione lyase; Provisional

 Score = 81.0 bits (200), Expect = 3e-18
 Identities = 50/152 (32%), Positives = 76/152 (50%), Gaps = 31/152 (20%)

Query: 115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGY-----GPEDS------ 163
           M   ++R+ D   ++ FY+  LGM LL++ D PE +++  FLGY      P D       
Sbjct: 28  MQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTDPPERTVW 87

Query: 164 ----HFVVELTYNYGVDK------YDIG----TGFGHFGIAVEDVAKTVDLVKAKGGKVT 209
                  +ELT+N+G +       Y  G     GFGH GI V+DV K  +  +  G +  
Sbjct: 88  TFGRKATIELTHNWGTESDPEFKGYHNGNSDPRGFGHIGITVDDVYKACERFEKLGVEFV 147

Query: 210 REP--GPVKGGNTVIAFIEDPDGYKFELLERG 239
           ++P  G +KG    +AFI+DPDGY  E+ +  
Sbjct: 148 KKPDDGKMKG----LAFIKDPDGYWIEIFDLK 175

Length = 185

>gnl|CDD|177995 PLN02367, PLN02367, lactoylglutathione lyase

 Score = 79.3 bits (195), Expect = 4e-17
 Identities = 51/150 (34%), Positives = 76/150 (50%), Gaps = 31/150 (20%)

Query: 115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGY-----GPED------- 162
           M   +YR+ D   ++ FY+  LGM LL++ D PE +++  F+GY      P D       
Sbjct: 76  MQQTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVW 135

Query: 163 ---SHFVVELTYNYGVDK------YDIGT----GFGHFGIAVEDVAKTVDLVKAKGGKVT 209
                  +ELT+N+G +       Y  G     GFGH GI V+DV K  +  +  G +  
Sbjct: 136 TFGQKATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFEELGVEFV 195

Query: 210 REP--GPVKGGNTVIAFIEDPDGYKFELLE 237
           ++P  G +KG    IAFI+DPDGY  E+ +
Sbjct: 196 KKPNDGKMKG----IAFIKDPDGYWIEIFD 221

Length = 233

>gnl|CDD|223423 COG0346, GloA, Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

 Score = 72.9 bits (178), Expect = 1e-15
 Identities = 31/141 (21%), Positives = 47/141 (33%), Gaps = 19/141 (13%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYG-----------PE 161
             + HV   V DL+ +I FYT+ LG++L++      D      L +              
Sbjct: 1   MGIHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFF 60

Query: 162 DSHFVVELTYNYGV-DKYDIGT-GFGHFGIAVEDVA---KTVDLVKAKGGKVTREPGPVK 216
                    +   V      G  G GH    V+D A     +  +   G ++        
Sbjct: 61  GFEGRAGTGFVGDVALGVPGGDLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEPGRG 120

Query: 217 GGNTVIAFIEDPDGYKFELLE 237
           G   V  +  DPDG   EL  
Sbjct: 121 G---VHVYFRDPDGILIELAT 138

Length = 138

>gnl|CDD|216182 pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 68.6 bits (168), Expect = 2e-14
 Identities = 33/115 (28%), Positives = 46/115 (40%), Gaps = 16/115 (13%)

Query: 247 QVMLRVGDLDRAINFYKK------------YTIAVMGYGPEDKNAVLELTYNHGVTEYDK 294
            V LRVGDL+++++FY                  +          VLEL  N        
Sbjct: 4   HVALRVGDLEKSLDFYTDVLGFKLVEEVDDGEGPLRSAFFTAGGRVLELLLNETPPPAAA 63

Query: 295 G---NGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWK 346
           G   +  A IA   DDV    + +K +G +I REPG   G   + +   DPDG  
Sbjct: 64  GFGGHHIAFIAFSVDDVDAAYDRLKAAGVEIVREPGR-HGWGGRYSYFRDPDGNL 117

Length = 120

>gnl|CDD|221708 pfam12681, Glyoxalase_2, Glyoxalase-like domain

 Score = 68.2 bits (167), Expect = 2e-14
 Identities = 30/115 (26%), Positives = 43/115 (37%), Gaps = 8/115 (6%)

Query: 121 RVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDI 180
            V DL+    FY E LG ++       +  Y    LG       F+  +      +    
Sbjct: 2   PVSDLEAARAFYEELLGFEVEE----EDGEYAEFRLGLVLALGGFIELIGLP---EPDAP 54

Query: 181 GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL 235
           G G  H    V+D+   V  +KA GG +   P     G     ++ DPDG   EL
Sbjct: 55  GGGGVHLYFEVDDLDALVARLKAAGGTILEPPEDTPWGGR-EFYVRDPDGNLIEL 108

This domain is related to the Glyoxalase domain pfam00903. Length = 109

>gnl|CDD|176706 cd08358, Glo_EDI_BRP_like_21, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 55.4 bits (134), Expect = 1e-09
 Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 10/88 (11%)

Query: 264 KYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKIT 323
           K++  ++GYGPED + V+ELTYN+G+ +Y+ GN +  I I +      A+          
Sbjct: 49  KWSKTMIGYGPEDDHFVVELTYNYGIGDYELGNDFLGITIHSKQAVSNAKKHNW------ 102

Query: 324 REPGPLPGINTKITACLDPDGWKSVFVD 351
               P+  +   +     P G+K   +D
Sbjct: 103 ----PVTEVEDGVYEVKAPGGYKFYLID 126

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 127

>gnl|CDD|176671 cd07247, SgaA_N_like, N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

 Score = 53.7 bits (130), Expect = 4e-09
 Identities = 28/120 (23%), Positives = 36/120 (30%), Gaps = 17/120 (14%)

Query: 122 VGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIG 181
             D ++   FY    G             Y     G G              G+ K    
Sbjct: 8   TTDPERAKAFYGAVFGWTF-EDMGDGGGDYAVFSTGGGA-----------VGGLMKAPEP 55

Query: 182 TGFGHFG----IAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE 237
                 G     AV+DV      V+A GGKV   P  +  G    A   DP+G  F L +
Sbjct: 56  AAGSPPGWLVYFAVDDVDAAAARVEAAGGKVLVPPTDI-PGVGRFAVFADPEGAVFGLWQ 114

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a streptomycin resistance protein. Length = 114

>gnl|CDD|211350 cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)

 Score = 53.7 bits (130), Expect = 5e-09
 Identities = 35/132 (26%), Positives = 57/132 (43%), Gaps = 17/132 (12%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLL-RKRDIPEDRYTNAFLGYGPEDSHFVVEL------ 169
           H+   V DL+  +KFY + LG+    R+    E     AFLG G  +    +EL      
Sbjct: 3   HIGIAVPDLEAALKFYRDVLGVGPWEREEVPSEQGVRLAFLGLG--NVQ--IELIEPLDD 58

Query: 170 --TYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIED 227
                  ++K   G G  H    V+D+   +  +KA+G ++ +E   +  G   +AF+  
Sbjct: 59  DSPIAKFLEKR--GEGLHHIAFEVDDIDAALARLKAQGVRLLQEGPRIGAGGKRVAFLHP 116

Query: 228 PDGYKF--ELLE 237
            D      EL+E
Sbjct: 117 KDTGGVLIELVE 128

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases. Length = 128

>gnl|CDD|176666 cd07242, Glo_EDI_BRP_like_6, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 53.1 bits (128), Expect = 7e-09
 Identities = 28/128 (21%), Positives = 46/128 (35%), Gaps = 15/128 (11%)

Query: 117 HVVYRVGDLDKTIKFYTECLG-MKLLRKRDIPEDR-YTNAFLGYGPEDSHFVVELTYNYG 174
           HV   V DL+++  FY   LG +     ++  + R +     G      + V++      
Sbjct: 4   HVELTVRDLERSRAFYDWLLGLLGFEEVKEWEDGRSWRAGDGGT-----YLVLQQADGES 58

Query: 175 VDKYDI-GTGFGHFGIAVEDVAKTVD----LVKAKGGKVTREPGPVK--GGNTVIAFIED 227
             ++D    G  H           VD     +  +G ++   P      G      F ED
Sbjct: 59  AGRHDRRNPGLHHLAFRAPSREA-VDELYARLAKRGAEILYAPREPYAGGPGYYALFFED 117

Query: 228 PDGYKFEL 235
           PDG + EL
Sbjct: 118 PDGIRLEL 125

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 128

>gnl|CDD|211348 cd06587, Glo_EDI_BRP_like, This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

 Score = 52.0 bits (125), Expect = 1e-08
 Identities = 29/111 (26%), Positives = 44/111 (39%), Gaps = 19/111 (17%)

Query: 247 QVMLRVGDLDRAINFYKKYTIAVMGYGPEDKN-------------AVLELTYNHGVTEYD 293
            V L V DL+ A+ FY+     V+G+   +++               LEL +        
Sbjct: 1   HVGLTVPDLEAAVAFYED----VLGFEVLERDGGGAEFAFLRLGGTRLEL-FEGDEPAPP 55

Query: 294 KGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 344
            G G   +A   DDV    E +K +G +I   P   P    ++    DPDG
Sbjct: 56  SGGGGVHLAFEVDDVDAAVERLKAAGVEILGGPREEPWGG-RVAYFRDPDG 105

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases. Length = 110

>gnl|CDD|222305 pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 52.3 bits (126), Expect = 1e-08
 Identities = 25/110 (22%), Positives = 40/110 (36%), Gaps = 3/110 (2%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD 176
           H+   V DLD    F+ + LG+               AF   G +     VEL      +
Sbjct: 2   HIGIVVPDLDAAAAFWVDLLGLGPWGDYRDEPQNVDLAFARLG-DGPAVEVELIQPLDGE 60

Query: 177 KYDI--GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAF 224
            +    G G  H    V+D+   V  ++A+G +V  +          +AF
Sbjct: 61  SFLDKGGPGLHHIAYWVDDLDAAVARLEAQGVRVAPKGPRAGAAGRRVAF 110

Length = 110

>gnl|CDD|176669 cd07245, Glo_EDI_BRP_like_9, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 52.2 bits (126), Expect = 1e-08
 Identities = 37/122 (30%), Positives = 51/122 (41%), Gaps = 13/122 (10%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDS-HFVVELTYNYGV 175
           HV  RV DL+ +  FYT+ LG++   +   P   +  A+L  G     H + E       
Sbjct: 3   HVALRVPDLEASRAFYTDVLGLEEGPR---PPFLFPGAWLYAGDGPQLHLIEE----DPP 55

Query: 176 DKYDIGTG-FGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIA-FIEDPDGYKF 233
           D    G G   H    V+D+      +KA G   T    P  G   V   F+ DPDG + 
Sbjct: 56  DALPEGPGRDDHIAFRVDDLDAFRARLKAAGVPYTESDVPGDG---VRQLFVRDPDGNRI 112

Query: 234 EL 235
           EL
Sbjct: 113 EL 114

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases. Length = 114

>gnl|CDD|225861 COG3324, COG3324, Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

 Score = 52.3 bits (126), Expect = 1e-08
 Identities = 35/128 (27%), Positives = 49/128 (38%), Gaps = 11/128 (8%)

Query: 113 RRMLHVVY---RVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVEL 169
                +V+    V DL++   FY +  G       D+ E RY   F   G      ++  
Sbjct: 5   GEKGTIVWFELPVSDLERAKAFYEKVFGWTFEDYFDMGEMRYA-VFPADGAGAGGGLMA- 62

Query: 170 TYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPD 229
                      G G      AV+D+  T++ V A GGKV R      GG   IA   DP+
Sbjct: 63  -----RPGSPPGGGGWVIYFAVDDIDATLERVVAAGGKVLRPKTEFPGGGR-IAHFVDPE 116

Query: 230 GYKFELLE 237
           G +F L  
Sbjct: 117 GNRFGLWS 124

Length = 127

>gnl|CDD|211356 cd08346, PcpA_N_like, N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

 Score = 51.5 bits (124), Expect = 3e-08
 Identities = 34/130 (26%), Positives = 50/130 (38%), Gaps = 19/130 (14%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPED-------SHFVVEL 169
           HV     D  +T+ FYT+ LG++L++K    +D  T   L +G          + F    
Sbjct: 4   HVTLVTRDAQETVDFYTDVLGLRLVKKTVNQDDPGTY-HLFFGDGLGSPGTLLTFFEWPD 62

Query: 170 TYNYGVDKYDIGTG-FGHFGIAVEDVAKTVDLVK---AKGGKVTREPGPVKGGNTVIAFI 225
               G      G G   H   +V   A      +   A G  V+      + G   + F 
Sbjct: 63  AGPKG----RRGPGQIHHIAFSVPSEASLEAWRERLRAAGVPVSGV--VDRFGERSLYF- 115

Query: 226 EDPDGYKFEL 235
           EDPDG + EL
Sbjct: 116 EDPDGIRLEL 125

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. Length = 126

>gnl|CDD|176683 cd07262, Glo_EDI_BRP_like_19, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 51.0 bits (123), Expect = 3e-08
 Identities = 34/127 (26%), Positives = 44/127 (34%), Gaps = 18/127 (14%)

Query: 117 HVVYRVGDLDKTIKFYTEC---LGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           HV   V DL++   FY      LG+K +              +GYG         +T  +
Sbjct: 3   HVTLGVNDLERARAFYDAVLAPLGIKRVM-------EDGPGAVGYGKGGGGPDFWVTKPF 55

Query: 174 GVDKYDIGTGFGHFGIAVEDVAKTVD----LVKAKGGKVTREPG--PVKGGNTVIAFIED 227
             +    G G  H   A       VD       A GG     PG  P  G     A++ D
Sbjct: 56  DGEPATAGNGT-HVAFAAPSRE-AVDAFHAAALAAGGTDEGAPGLRPHYGPGYYAAYVRD 113

Query: 228 PDGYKFE 234
           PDG K E
Sbjct: 114 PDGNKIE 120

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 123

>gnl|CDD|213698 TIGR02295, HpaD, 3,4-dihydroxyphenylacetate 2,3-dioxygenase

 Score = 53.6 bits (129), Expect = 4e-08
 Identities = 53/208 (25%), Positives = 71/208 (34%), Gaps = 58/208 (27%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFL-GYGPEDSHFVVELTYN 172
           R  HV  RV DLDK+ +FY + LG +               +L G      H +V     
Sbjct: 4   RTGHVELRVTDLDKSREFYVDLLGFRETESDK------EYIYLRGIEEFQHHSLVLTKAP 57

Query: 173 YGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPD 229
                        + G  V   ED+ K  D  +  G  V        GG      +EDP 
Sbjct: 58  S--------AALSYIGFRVSKEEDLDKAADFFQKLGHPVRLVR---DGGQPEALRVEDPF 106

Query: 230 GYKFEL---------------LERGPTPEPLCQVMLRVGDLDRAINFYKKYTIAVMGYGP 274
           GY  E                  RG +P  L    + V D+ RA+ FYK+     +G+  
Sbjct: 107 GYPIEFYFEMEKVERLLRRYHRHRGVSPVRLDHFNVFVPDVQRALRFYKE----ELGF-- 160

Query: 275 EDKNAVLELTYNHGVTEY---DKGNGYA 299
                         VTEY   D+GN  A
Sbjct: 161 -------------RVTEYTEDDEGNLAA 175

This enzyme catalyzes the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. 4-hydroxyphenylacetate arises from the degradation of tyrosine. The substrate, 3,4-dihydroxyphenylacetate (homoprotocatechuate) arises from the action of a hydroxylase on 4-hydroxyphenylacetate. The aromatic ring is opened by this dioxygenase exo to the 3,4-diol resulting in 2-hydroxy-5-carboxymethylmuconate semialdehyde. The enzyme from Bacillus brevis contains manganese. Length = 294

>gnl|CDD|176710 cd08362, BphC5-RrK37_N_like, N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

 Score = 48.9 bits (117), Expect = 2e-07
 Identities = 32/129 (24%), Positives = 48/129 (37%), Gaps = 22/129 (17%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
             +  V   V DL     FY E  G+ ++       +     +L       H ++ L  +
Sbjct: 2   TALRGVGLGVPDLAAAAAFYREVWGLSVV------AEDDGIVYLR-ATGSEHHILRLRRS 54

Query: 173 YGVDKYDIGTGFGHFGIA----VEDVAKTVDLVKAKGGKVTREPGPVK--GGNTVIAFIE 226
              D+  +      F +A    V+ +A+ V    A+GG V  EPG     GG     F  
Sbjct: 55  ---DRNRLDV--VSFSVASRADVDALARQVA---ARGGTVLSEPGATDDPGGGYGFRFF- 105

Query: 227 DPDGYKFEL 235
           DPDG   E 
Sbjct: 106 DPDGRLIEF 114

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxygenases are activated by Fe(II). Length = 120

>gnl|CDD|221708 pfam12681, Glyoxalase_2, Glyoxalase-like domain

 Score = 46.3 bits (110), Expect = 1e-06
 Identities = 25/108 (23%), Positives = 37/108 (34%), Gaps = 18/108 (16%)

Query: 250 LRVGDLDRAINFYKKYTIAVMGYGPE---DKNAVLELTYN----------HGVTEYDKGN 296
           L V DL+ A  FY++    ++G+  E    + A   L                     G 
Sbjct: 1   LPVSDLEAARAFYEE----LLGFEVEEEDGEYAEFRLGLVLALGGFIELIGLPEPDAPGG 56

Query: 297 GYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 344
           G   +    DD+      +K +GG I   P   P    +     DPDG
Sbjct: 57  GGVHLYFEVDDLDALVARLKAAGGTILEPPEDTPW-GGREFYVRDPDG 103

This domain is related to the Glyoxalase domain pfam00903. Length = 109

>gnl|CDD|225861 COG3324, COG3324, Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

 Score = 46.2 bits (110), Expect = 2e-06
 Identities = 34/110 (30%), Positives = 45/110 (40%), Gaps = 22/110 (20%)

Query: 250 LRVGDLDRAINFYKKYTIAVMGYGPEDKNAVLELTYNHGVTEYDK--------------- 294
           L V DL+RA  FY+K    V G+  ED   + E+ Y   V   D                
Sbjct: 15  LPVSDLERAKAFYEK----VFGWTFEDYFDMGEMRY--AVFPADGAGAGGGLMARPGSPP 68

Query: 295 GNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 344
           G G   I    DD+  T E +  +GGK+ R     PG    I   +DP+G
Sbjct: 69  GGGGWVIYFAVDDIDATLERVVAAGGKVLRPKTEFPGGGR-IAHFVDPEG 117

Length = 127

>gnl|CDD|176688 cd07267, THT_Oxygenase_N, N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

 Score = 45.3 bits (108), Expect = 3e-06
 Identities = 34/128 (26%), Positives = 49/128 (38%), Gaps = 25/128 (19%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFL-GYGPEDSHFVVELTY 171
             + HV +   DLDK  +F T+  G+++  + D         +  GYG +   FV     
Sbjct: 2   TDIAHVRFEHPDLDKAERFLTD-FGLEVAARTD------DELYYRGYGTD--PFV----- 47

Query: 172 NYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAK---GGKVTREPGPVKGGNTVIAFIEDP 228
            Y   K +    F          A   DL KA    G  V  +     GG  V   + DP
Sbjct: 48  -YVARKGE-KARFVGAAFEAASRA---DLEKAAALPGASVIDDLEAPGGGKRVT--LTDP 100

Query: 229 DGYKFELL 236
           DG+  EL+
Sbjct: 101 DGFPVELV 108

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity. Length = 113

>gnl|CDD|176696 cd08348, BphC2-C3-RGP6_C_like, The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

 Score = 45.7 bits (109), Expect = 4e-06
 Identities = 35/139 (25%), Positives = 51/139 (36%), Gaps = 12/139 (8%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD 176
           HVV  V DL+  ++FY + LG  +      P       FL   P++ H +  +T      
Sbjct: 4   HVVLYVRDLEAMVRFYRDVLGFTV--TDRGPLGGL--VFLSRDPDEHHQIALITGRPAAP 59

Query: 177 KYDIGTGFGHFGIAVEDVAKTVDLV---KAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
                 G  H    V+ +    DL    +A G        PV  GN    +  DPDG + 
Sbjct: 60  PPG-PAGLNHIAFEVDSLDDLRDLYERLRAAGIT---PVWPVDHGNAWSIYFRDPDGNRL 115

Query: 234 EL-LERGPTPEPLCQVMLR 251
           EL ++           ML 
Sbjct: 116 ELFVDTPWYVAQAAAFMLD 134

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are one-domain dioxygenases, which form hexamers. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, its two domains do not belong to this subfamily. Length = 134

>gnl|CDD|213772 TIGR03081, metmalonyl_epim, methylmalonyl-CoA epimerase

 Score = 44.2 bits (105), Expect = 8e-06
 Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 6/129 (4%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           R+ HV   V DL++  KFY + LG ++    ++PE      F+  G      +  L  + 
Sbjct: 1   RIDHVGIAVPDLEEAAKFYEDVLGAQVSEIEELPEQGVKVVFIALGNTKVELLEPLGEDS 60

Query: 174 GVDKY--DIGTGFGHFGIAVEDVAKTVDLVKAKGGK-VTREPGPVKGGNTVIAFI--EDP 228
            + K+    G G  H  I V+D+   ++ +K KG + +  EP     G  V AF+  +  
Sbjct: 61  PIAKFLEKNGGGIHHIAIEVDDIEAALETLKEKGVRLIDEEPRIGAHGKPV-AFLHPKST 119

Query: 229 DGYKFELLE 237
            G   EL +
Sbjct: 120 GGVLIELEQ 128

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer. Length = 128

>gnl|CDD|176702 cd08354, Glo_EDI_BRP_like_13, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 43.4 bits (103), Expect = 2e-05
 Identities = 36/126 (28%), Positives = 55/126 (43%), Gaps = 20/126 (15%)

Query: 122 VGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIG 181
           V DL+    FY + LG++L+ K D    R   AF   G       + L ++ G      G
Sbjct: 8   VDDLEAAEAFYEDVLGLELMLKED---RR--LAFFWVGGRG----MLLLFDPGATSTPGG 58

Query: 182 T-------GFGHFGIAV--EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 232
                   G GHF  A+  E++A+    ++AKG  +  E    +GG ++  +  DPDG  
Sbjct: 59  EIPPHGGSGPGHFAFAIPAEELAEWEAHLEAKGVAIESEVQWPRGGRSL--YFRDPDGNL 116

Query: 233 FELLER 238
            EL   
Sbjct: 117 LELATP 122

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 122

>gnl|CDD|211357 cd08349, BLMA_like, Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

 Score = 43.0 bits (102), Expect = 2e-05
 Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 11/114 (9%)

Query: 119 VYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKY 178
           V  V D++K++ FY + LG ++  +   PE  Y  A +      +   +           
Sbjct: 3   VLPVSDIEKSLAFYRDVLGFEVDFEH--PEPLY--AQVSRD--GAQLHLSEHDGDEWVPL 56

Query: 179 DIGTGFGHFGIAVEDVAKTVDLVKAKG-GKVTREPGPVKGGNTVIAFIEDPDGY 231
             G     + I V+DV      +KAKG   +   P     G    A ++DPDG 
Sbjct: 57  GRGGNV--Y-IEVDDVDALYAELKAKGAKLIVYPPEDQPWGQREFA-VQDPDGN 106

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the larger superfamily, this family contains members with or without domain swapping. Length = 112

>gnl|CDD|211351 cd07251, Glo_EDI_BRP_like_10, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 42.9 bits (102), Expect = 2e-05
 Identities = 29/126 (23%), Positives = 45/126 (35%), Gaps = 26/126 (20%)

Query: 122 VGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKY--D 179
           V DL ++  FY    G K         D    AF   G      V+ L   +  ++   D
Sbjct: 6   VADLARSRAFYRA-GGWK---TSADSNDGV--AFFQLG----GLVLAL---FPREELAKD 52

Query: 180 IG-----TGFGHFGIA-----VEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPD 229
            G      GF    +A      ++V   +    A G  + + P  V  G     +  DPD
Sbjct: 53  AGVPVPPPGFSGITLAHNVRSEDEVDAVLARAAAAGATIVKPPQKVFWGG-YSGYFADPD 111

Query: 230 GYKFEL 235
           G+ +E+
Sbjct: 112 GHLWEV 117

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 120

>gnl|CDD|211353 cd07263, Glo_EDI_BRP_like_16, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 42.6 bits (101), Expect = 3e-05
 Identities = 33/141 (23%), Positives = 50/141 (35%), Gaps = 41/141 (29%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD 176
            V   V D DK + FYTE LG ++  + D+P                   V +       
Sbjct: 1   LVSLYVDDQDKALAFYTEKLGFEV--REDVP------------MGGGFRWVTVA-----P 41

Query: 177 KYDIGTGF------------------GHFGI--AVEDVAKTVDLVKAKGGKVTREPGPVK 216
                T                    G  G+    +D+  T + +KA+G + T EP  + 
Sbjct: 42  PGSPETSLVLAPPANPAAMASGLQPGGTPGLVLVTDDIDATYEELKARGVEFTEEPREMP 101

Query: 217 GGNTVIAFIEDPDGYKFELLE 237
            G   +A   DPDG  F L++
Sbjct: 102 YG--TVAVFRDPDGNLFVLVQ 120

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 120

>gnl|CDD|176676 cd07253, Glo_EDI_BRP_like_2, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 42.6 bits (101), Expect = 3e-05
 Identities = 14/33 (42%), Positives = 23/33 (69%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRD 145
           +R+ HVV  V D++ T+ FYT  LGM+++R  +
Sbjct: 2   KRIDHVVLTVADIEATLDFYTRVLGMEVVRFGE 34

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

>gnl|CDD|176693 cd08345, Fosfomycin_RP, Fosfomycin resistant protein; inhibits the biological function of fosfomycin

 Score = 42.6 bits (100), Expect = 3e-05
 Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 17/122 (13%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRY---TNAFLGYGPEDSHFVVELTYNY 173
           H+   V DL+K+I FY + LG +L+      ++ Y      ++    EDS    E TY +
Sbjct: 1   HITLIVKDLNKSIAFYRDILGAELIYSSS--KEAYFELAGLWICLMEEDSLQGPERTYTH 58

Query: 174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
                        F I  E+  +  + +KA G ++  E   V+G    I F  DPDG+  
Sbjct: 59  IA-----------FQIQSEEFDEYTERLKALGVEMKPERPRVQGEGRSIYFY-DPDGHLL 106

Query: 234 EL 235
           EL
Sbjct: 107 EL 108

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases. Length = 113

>gnl|CDD|176677 cd07254, Glo_EDI_BRP_like_20, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 41.9 bits (99), Expect = 5e-05
 Identities = 30/128 (23%), Positives = 49/128 (38%), Gaps = 26/128 (20%)

Query: 116 LHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDS--HFVVELTYNY 173
            HV   V DL+ +I FY++  G++  + R    D Y      +  ED   +FV+      
Sbjct: 3   FHVALNVDDLEASIAFYSKLFGVEPTKVR----DDYAK----FLLEDPRLNFVLN----- 49

Query: 174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAF-------IE 226
                  G G  H G+ V+      ++ +AK           K  +T   +       + 
Sbjct: 50  -ERPGAPGGGLNHLGVQVDSAE---EVAEAKARAEAAGLPTFKEEDTTCCYAVQDKVWVT 105

Query: 227 DPDGYKFE 234
           DPDG  +E
Sbjct: 106 DPDGNAWE 113

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 120

>gnl|CDD|211352 cd07255, Glo_EDI_BRP_like_12, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 42.2 bits (100), Expect = 5e-05
 Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 7/82 (8%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           R+  V  RV DL++++ FY + LG+++L + D      + A LG G +    V+E   + 
Sbjct: 2   RIGAVTLRVADLERSLAFYQDVLGLEVLERTD------STAVLGTGGKRPLLVLEEDPDA 55

Query: 174 GVDKYDIGTGFGHFGIAVEDVA 195
                   TG  HF I +   A
Sbjct: 56  PPAPPG-TTGLYHFAILLPSRA 76

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 125

>gnl|CDD|176708 cd08360, MhqB_like_C, C-terminal domain of Burkholderia sp

 Score = 41.9 bits (99), Expect = 7e-05
 Identities = 31/131 (23%), Positives = 46/131 (35%), Gaps = 23/131 (17%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTN--AFLGYGPEDSHFVVELT 170
           RR+ HVV  V D++    FY + LG +         DR+    AFL       H  + L 
Sbjct: 2   RRLGHVVLFVPDVEAAEAFYRDRLGFR-------VSDRFKGRGAFLRAAGGGDHHNLFL- 53

Query: 171 YNYGVDKYDIGTGFGHFGIAVEDV------AKTVDLVKAKGGKVTREPGPVKGGNTVIAF 224
               +       GF H    V D+         +      G +    PG  + G+    +
Sbjct: 54  ----IKTPAPMAGFHHAAFEVGDIDEVMLGGNHML---RAGYQTGWGPGRHRIGSNYFWY 106

Query: 225 IEDPDGYKFEL 235
             DP G + E 
Sbjct: 107 FRDPWGGEVEY 117

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Length = 134

>gnl|CDD|211358 cd08352, Glo_EDI_BRP_like_1, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 41.5 bits (98), Expect = 8e-05
 Identities = 39/139 (28%), Positives = 54/139 (38%), Gaps = 29/139 (20%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPE-DSH-FVVELT 170
           + + HV     D  ++ +FY E LG+ L+R+              Y PE  S+   + L 
Sbjct: 2   KGIHHVAIICSDYARSKEFYVEVLGLTLIRET-------------YRPERKSYKLDLALN 48

Query: 171 YNYGVD-----------KYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKG-G 218
             Y ++            Y    G  H   AVED+   V  +KA G +V  EP  V    
Sbjct: 49  GEYQIELFSFPNPPPRPSYPEACGLRHLAFAVEDIEAAVAELKAHGVEV--EPIRVDEFT 106

Query: 219 NTVIAFIEDPDGYKFELLE 237
                F  DPDG   EL E
Sbjct: 107 GKRFTFFYDPDGLPLELYE 125

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

>gnl|CDD|213698 TIGR02295, HpaD, 3,4-dihydroxyphenylacetate 2,3-dioxygenase

 Score = 43.2 bits (102), Expect = 1e-04
 Identities = 32/127 (25%), Positives = 52/127 (40%), Gaps = 14/127 (11%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           R+ H    V D+ + ++FY E LG ++    +  E     A+L       H   ++    
Sbjct: 136 RLDHFNVFVPDVQRALRFYKEELGFRVTEYTEDDEGNLAAAWLHRKG-GVH---DIALTN 191

Query: 174 GVDKYDIGTGFGHFGIAVEDVA---KTVDLVKAKGGKVTREPGPVKGG--NTVIAFIEDP 228
           G      G    H    V D     K  D++ + G   + E GP + G  N    ++ DP
Sbjct: 192 GN-----GPRLHHIAYWVHDPLNIIKACDILASAGLSDSIERGPGRHGVSNAFFLYLRDP 246

Query: 229 DGYKFEL 235
           DG++ EL
Sbjct: 247 DGHRIEL 253

This enzyme catalyzes the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. 4-hydroxyphenylacetate arises from the degradation of tyrosine. The substrate, 3,4-dihydroxyphenylacetate (homoprotocatechuate) arises from the action of a hydroxylase on 4-hydroxyphenylacetate. The aromatic ring is opened by this dioxygenase exo to the 3,4-diol resulting in 2-hydroxy-5-carboxymethylmuconate semialdehyde. The enzyme from Bacillus brevis contains manganese. Length = 294

>gnl|CDD|176668 cd07244, FosA, FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

 Score = 41.2 bits (97), Expect = 1e-04
 Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 19/121 (15%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD 176
           H+   V DL++++ FY + LG KL  + D        A+L  G  D    + +  N G  
Sbjct: 4   HITLAVSDLERSVAFYVDLLGFKLHVRWD------KGAYLEAG--DLWLCLSVDANVGPA 55

Query: 177 KYDIGTGFGH--FGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFE 234
           K      + H  F ++ ED A   + ++  G K  +E      G++   +  DPDG+K E
Sbjct: 56  K-----DYTHYAFSVSEEDFASLKEKLRQAGVKEWKE--NTSEGDSF--YFLDPDGHKLE 106

Query: 235 L 235
           L
Sbjct: 107 L 107

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases. Length = 121

>gnl|CDD|176661 cd07237, BphC1-RGP6_C_like, C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

 Score = 41.4 bits (98), Expect = 1e-04
 Identities = 23/105 (21%), Positives = 33/105 (31%), Gaps = 18/105 (17%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN---- 172
           HVV    D D+   FY + LG +L        D               F   L  N    
Sbjct: 12  HVVLATPDPDEAHAFYRDVLGFRL-------SDEIDIPLPPGPTARVTF---LHCNGRHH 61

Query: 173 -YGVDKYDIGTGFGHFGIAVE---DVAKTVDLVKAKGGKVTREPG 213
              + +        H  + V    DV +  D V+A+G  +    G
Sbjct: 62  SLALAEGPGPKRIHHLMLEVTSLDDVGRAYDRVRARGIPIAMTLG 106

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in this subfamily. BphC2-RGP6 and BphC3-RGP6 are one-domain dioxygenases, they belong to a different subfamily of the ED_TypeI_classII_C (C-terminal domain of type I, class II extradiol dioxygenases) family. Length = 154

>gnl|CDD|177995 PLN02367, PLN02367, lactoylglutathione lyase

 Score = 41.5 bits (97), Expect = 2e-04
 Identities = 43/148 (29%), Positives = 60/148 (40%), Gaps = 50/148 (33%)

Query: 247 QVMLRVGDLDRAINFYK----------------KYTIAVMGY-----GPED--------- 276
           Q M R+ D   +++FY                 K+++  MGY      P D         
Sbjct: 78  QTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTF 137

Query: 277 -KNAVLELTYNHGVTE-------YDKGN----GYAQIAIGTDDVYKTAEAIKLSGGKITR 324
            + A +ELT+N G TE       Y  GN    G+  I I  DDVYK  E  +  G +  +
Sbjct: 138 GQKATIELTHNWG-TESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFEELGVEFVK 196

Query: 325 EP--GPLPGINTKITACLDPDG-WKSVF 349
           +P  G + G    I    DPDG W  +F
Sbjct: 197 KPNDGKMKG----IAFIKDPDGYWIEIF 220

Length = 233

>gnl|CDD|211355 cd08343, ED_TypeI_classII_C, C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

 Score = 40.8 bits (96), Expect = 2e-04
 Identities = 35/124 (28%), Positives = 53/124 (42%), Gaps = 16/124 (12%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD 176
           HVV R  D+  T  FYT+ LG ++  +   P      A+L    ++ H +        + 
Sbjct: 2   HVVLRTPDVAATRAFYTDVLGFRVSDRVGDPGVLAA-AWL-RCDDEHHDL-------ALF 52

Query: 177 KYDIGTGFGHFGIAVE---DVAKTVDLVKAKGGKVTREPGPVK--GGNTVIAFIEDPDGY 231
               G G  H    VE   D+ +  D + A G  +  E GP +   GN +  +  DPDG 
Sbjct: 53  PGPEGPGLHHVAFEVESLDDIKRAGDRLAANG--IQIEWGPGRHGPGNNLFLYFRDPDGN 110

Query: 232 KFEL 235
           + EL
Sbjct: 111 RIEL 114

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are type I, class II enzymes, and are composed of the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. A catalytically essential metal, Fe(II) or Mn(II), presents in all the enzymes in this family. Length = 131

>gnl|CDD|176671 cd07247, SgaA_N_like, N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

 Score = 39.5 bits (93), Expect = 3e-04
 Identities = 26/105 (24%), Positives = 37/105 (35%), Gaps = 13/105 (12%)

Query: 250 LRVGDLDRAINFYKK---YTIAVMGYGPE-------DKNAVLELTYNHGVTEYDKGNGYA 299
           L   D +RA  FY     +T   MG G            AV  L                
Sbjct: 6   LPTTDPERAKAFYGAVFGWTFEDMGDGGGDYAVFSTGGGAVGGLMKAPE--PAAGSPPGW 63

Query: 300 QIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 344
            +    DDV   A  ++ +GGK+   P  +PG+  +     DP+G
Sbjct: 64  LVYFAVDDVDAAAARVEAAGGKVLVPPTDIPGV-GRFAVFADPEG 107

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a streptomycin resistance protein. Length = 114

>gnl|CDD|176683 cd07262, Glo_EDI_BRP_like_19, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 39.4 bits (93), Expect = 4e-04
 Identities = 31/119 (26%), Positives = 37/119 (31%), Gaps = 24/119 (20%)

Query: 248 VMLRVGDLDRAINFYKK------------YTIAVMGYGPEDKNAVLELTYNHGVTEYDKG 295
           V L V DL+RA  FY                   +GYG         +T          G
Sbjct: 4   VTLGVNDLERARAFYDAVLAPLGIKRVMEDGPGAVGYGKGGGGPDFWVTKPFDGEPATAG 63

Query: 296 NGYAQIAI------GTDDVYKTAEAIKLSGGKITREPGPLPGINTKITAC--LDPDGWK 346
           NG   +A         D  +  A A+   GG     PG  P       A    DPDG K
Sbjct: 64  NG-THVAFAAPSREAVDAFH--AAALAA-GGTDEGAPGLRPHYGPGYYAAYVRDPDGNK 118

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 123

>gnl|CDD|176690 cd08342, HPPD_N_like, N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

 Score = 39.8 bits (94), Expect = 4e-04
 Identities = 29/127 (22%), Positives = 50/127 (39%), Gaps = 9/127 (7%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVV--ELTYNYG 174
           HV + VG+  +   +++  LG + +      ED+ +         D +FV+   L     
Sbjct: 3   HVEFYVGNAKQLASWFSTKLGFEPVAYH-GSEDKASYL---LRQGDINFVLNSPLNSFAP 58

Query: 175 VDKYDI--GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 232
           V  +    G G       V+D A   +   A+G K  +EP   + G   IA I+      
Sbjct: 59  VADFLEKHGDGVCDVAFRVDDAAAAYERAVARGAKPVQEP-VEEPGELKIAAIKGYGDSL 117

Query: 233 FELLERG 239
             L++R 
Sbjct: 118 HTLVDRK 124

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, substrates, do not use alpha-ketoglutarate, and incorporate both atoms of dioxygen into the aromatic product. Both HPPD and HmaS exhibit duplicate beta barrel topology in their N- and C-terminal domains which share sequence similarity, suggestive of a gene duplication. Each protein has only one catalytic site located in at the C-terminal domain. This HPPD_N_like domain represents the N-terminal domain. Length = 136

>gnl|CDD|211354 cd07266, HPCD_N_class_II, N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

 Score = 39.2 bits (92), Expect = 4e-04
 Identities = 35/128 (27%), Positives = 51/128 (39%), Gaps = 22/128 (17%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDS-HFVVELTYN 172
           R+ HV  RV DLD++ +FY + LG+       +  +    A    G E+  H  + LT  
Sbjct: 4   RLGHVELRVTDLDRSREFYVDLLGL-------VVTEEDDGAIYLRGLEEFIHHSLVLT-- 54

Query: 173 YGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTR-EPGPVKG-GNTVIAFIED 227
               K       GH G  V   ED+ K     +  G      E G   G G  +   ++D
Sbjct: 55  ----KAP-EPAVGHLGFRVRSEEDLDKAEAFFQELGLPTRWVEAGEEPGQGRALR--VQD 107

Query: 228 PDGYKFEL 235
           P G+  E 
Sbjct: 108 PLGFPLEF 115

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a different superfamily. Length = 121

>gnl|CDD|215548 PLN03042, PLN03042, Lactoylglutathione lyase; Provisional

 Score = 39.4 bits (92), Expect = 0.001
 Identities = 41/148 (27%), Positives = 60/148 (40%), Gaps = 50/148 (33%)

Query: 247 QVMLRVGDLDRAINFYK----------------KYTIAVMGY-----GPED--------- 276
           Q M R+ D   +++FY                 K+++  +GY      P D         
Sbjct: 30  QTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTDPPERTVWTF 89

Query: 277 -KNAVLELTYNHGVTE-------YDKGN----GYAQIAIGTDDVYKTAEAIKLSGGKITR 324
            + A +ELT+N G TE       Y  GN    G+  I I  DDVYK  E  +  G +  +
Sbjct: 90  GRKATIELTHNWG-TESDPEFKGYHNGNSDPRGFGHIGITVDDVYKACERFEKLGVEFVK 148

Query: 325 EP--GPLPGINTKITACLDPDG-WKSVF 349
           +P  G + G    +    DPDG W  +F
Sbjct: 149 KPDDGKMKG----LAFIKDPDGYWIEIF 172

Length = 185

>gnl|CDD|233334 TIGR01263, 4HPPD, 4-hydroxyphenylpyruvate dioxygenase

 Score = 40.0 bits (94), Expect = 0.001
 Identities = 48/263 (18%), Positives = 86/263 (32%), Gaps = 67/263 (25%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVV--ELTYNYG 174
            V + VGD  +   +Y    G + + K     ++ ++          +FV+    + +  
Sbjct: 5   FVEFYVGDAKQAAYYYFTRFGFEKVAKETGHREKASHV---LRQGQINFVLTAPYSSDSP 61

Query: 175 VDKYDI--GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIE------ 226
              +    G G       V+D A   +    +G +  + P  +  G   +A I+      
Sbjct: 62  AADFAAKHGDGVKDVAFRVDDAAAAFEAAVERGAEPVQAPVELDEGAVTLATIKGIGDVV 121

Query: 227 ----DPDGYK-------FELLERGPTPEPLCQVMLRV----------GDLDRAINFYKKY 265
               D  GYK       FE L      EP   V L            G ++    FY+K 
Sbjct: 122 HTLVDRGGYKGSFYPGFFESLLDAALHEPPPGVGLIAIDHLVGNVYRGQMEPWAEFYEK- 180

Query: 266 TIAVMGY---------GPEDK-NAVLELTYNHGVT----EYDKGNGYAQI---------- 301
              + G+               N+++  + +  V     E   G   +QI          
Sbjct: 181 ---IFGFREIRSFDIKTEYSALNSIVMASPDGKVKIPLNEPASGKDKSQIEEFLEFYNGA 237

Query: 302 -----AIGTDDVYKTAEAIKLSG 319
                A+ TDD+ +T  A++  G
Sbjct: 238 GVQHIALNTDDIVRTVRALRARG 260

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PMID:8000039). In some bacterial species, this enzyme has been studied as a hemolysin [Energy metabolism, Amino acids and amines]. Length = 353

>gnl|CDD|234146 TIGR03211, catechol_2_3, catechol 2,3 dioxygenase

 Score = 39.2 bits (92), Expect = 0.002
 Identities = 37/127 (29%), Positives = 55/127 (43%), Gaps = 20/127 (15%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDR-YTNAFLGYGPEDSHFVVELTYN 172
           R+ HV  RV DL++++K YT+ LG++    RD    R Y  A+  +     H+ V LT  
Sbjct: 4   RLGHVELRVLDLEESLKHYTDVLGLEET-GRD--GQRVYLKAWDEWD----HYSVILTEA 56

Query: 173 YGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREP-GPVKGGNTVIAFIEDP 228
              D      G  H    V    D+ + V  ++A G      P G + G    + F   P
Sbjct: 57  ---DT----AGLDHMAFKVESEADLERLVKRLEAYGVGTGWIPAGELPGVGRRVRF-TLP 108

Query: 229 DGYKFEL 235
            G+  EL
Sbjct: 109 SGHTMEL 115

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase [Energy metabolism, Other]. Length = 303

>gnl|CDD|176663 cd07239, BphC5-RK37_C_like, C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

 Score = 37.4 bits (87), Expect = 0.003
 Identities = 30/125 (24%), Positives = 51/125 (40%), Gaps = 17/125 (13%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
            ++ HVV    D+DKT+ FY + LG ++    D   D+   AFL     D H +      
Sbjct: 3   VKISHVVLNSPDVDKTVAFYEDVLGFRV---SDWLGDQM--AFLRCN-SDHHSIAIARGP 56

Query: 173 YGVDKYDIGTGFGHFGI---AVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPD 229
           +            H      ++++V + +  +  KG  +   PG    G+   A+  DP 
Sbjct: 57  H--------PSLNHVAFEMPSIDEVMRGIGRMIDKGIDILWGPGRHGPGDNTFAYFLDPG 108

Query: 230 GYKFE 234
           G+  E
Sbjct: 109 GFVIE 113

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxygenases are activated by Fe(II). Length = 144

>gnl|CDD|222305 pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 36.1 bits (84), Expect = 0.004
 Identities = 20/100 (20%), Positives = 31/100 (31%), Gaps = 9/100 (9%)

Query: 186 HFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGN--TVIAFIEDPDGYKFELLERGPTPE 243
           H GI V D+           G         +  N     A + D    + EL++      
Sbjct: 2   HIGIVVPDLDAAAAFWVDLLGLGPWGDYRDEPQNVDLAFARLGDGPAVEVELIQPLDGES 61

Query: 244 PLCQ-------VMLRVGDLDRAINFYKKYTIAVMGYGPED 276
            L +       +   V DLD A+   +   + V   GP  
Sbjct: 62  FLDKGGPGLHHIAYWVDDLDAAVARLEAQGVRVAPKGPRA 101

Length = 110

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	360
PLN02300	286	lactoylglutathione lyase	100.0
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	100.0
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.97
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.97
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.96
PLN02367	233	lactoylglutathione lyase	99.84
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	99.82
PRK10291	129	glyoxalase I; Provisional	99.81
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	99.81
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	99.81
PLN03042	185	Lactoylglutathione lyase; Provisional	99.78
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	99.77
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	99.76
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	99.75
PRK11478	129	putative lyase; Provisional	99.75
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	99.75
cd07243	143	2_3_CTD_C C-terminal domain of catechol 2,3-dioxyg	99.75
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	99.74
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	99.73
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	99.73
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	99.72
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	99.72
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	99.72
PRK04101	139	fosfomycin resistance protein FosB; Provisional	99.71
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	99.7
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.69
PLN02300	286	lactoylglutathione lyase	99.69
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	99.69
cd07256	161	HPCD_C_class_II C-terminal domain of 3,4-dihydroxy	99.69
cd09013	121	BphC-JF8_N_like N-terminal, non-catalytic, domain	99.69
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.68
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.67
cd09014	166	BphC-JF8_C_like C-terminal, catalytic, domain of B	99.67
cd07258	141	PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cuma	99.67
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	99.67
cd07266	121	HPCD_N_class_II N-terminal domain of 3,4-dihydroxy	99.66
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	99.65
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	99.65
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	99.65
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	99.65
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	99.65
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	99.65
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	99.64
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	99.64
cd08343	131	ED_TypeI_classII_C C-terminal domain of type I, cl	99.64
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	99.64
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	99.64
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	99.63
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	99.63
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	99.63
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	99.63
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	99.63
PRK06724	128	hypothetical protein; Provisional	99.63
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	99.62
cd09011	120	Glo_EDI_BRP_like_23 This conserved domain belongs	99.61
PLN02367	233	lactoylglutathione lyase	99.61
cd08351	123	ChaP_like ChaP, an enzyme involved in the biosynth	99.6
cd08362	120	BphC5-RrK37_N_like N-terminal, non-catalytic, doma	99.6
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	99.6
cd07267	113	THT_Oxygenase_N N-terminal domain of 2,4,5-trihydr	99.6
cd07264	125	Glo_EDI_BRP_like_15 This conserved domain belongs	99.59
cd08355	122	Glo_EDI_BRP_like_14 This conserved domain belongs	99.58
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	99.58
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	99.57
cd07246	122	Glo_EDI_BRP_like_8 This conserved domain belongs t	99.57
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	99.56
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	99.55
cd08345	113	Fosfomycin_RP Fosfomycin resistant protein; inhibi	99.55
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	99.55
PRK10291	129	glyoxalase I; Provisional	99.54
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	99.54
PLN03042	185	Lactoylglutathione lyase; Provisional	99.54
cd08354	122	Glo_EDI_BRP_like_13 This conserved domain belongs	99.54
cd07244	121	FosA FosA, a Fosfomycin resistance protein, cataly	99.54
cd07243	143	2_3_CTD_C C-terminal domain of catechol 2,3-dioxyg	99.53
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	99.53
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	99.53
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	99.53
PRK11478	129	putative lyase; Provisional	99.53
cd08357	125	Glo_EDI_BRP_like_18 This conserved domain belongs	99.52
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	99.52
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	99.51
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	99.51
cd08349	112	BLMA_like Bleomycin binding protein (BLMA) and sim	99.51
COG3324	127	Predicted enzyme related to lactoylglutathione lya	99.5
cd07254	120	Glo_EDI_BRP_like_20 This conserved domain belongs	99.5
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	99.5
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	99.5
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	99.49
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	99.49
cd09011	120	Glo_EDI_BRP_like_23 This conserved domain belongs	99.49
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	99.49
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	99.48
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	99.48
cd07261	114	Glo_EDI_BRP_like_11 This conserved domain belongs	99.48
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	99.48
PRK06724	128	hypothetical protein; Provisional	99.47
cd07258	141	PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cuma	99.47
PRK04101	139	fosfomycin resistance protein FosB; Provisional	99.46
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	99.46
cd08350	120	BLMT_like BLMT, a bleomycin resistance protein enc	99.46
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	99.45
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	99.44
COG3324	127	Predicted enzyme related to lactoylglutathione lya	99.44
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	99.43
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	99.43
cd07264	125	Glo_EDI_BRP_like_15 This conserved domain belongs	99.43
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	99.43
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	99.43
cd07256	161	HPCD_C_class_II C-terminal domain of 3,4-dihydroxy	99.42
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	99.42
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	99.41
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	99.41
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	99.4
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	99.4
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	99.4
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	99.38
cd07266	121	HPCD_N_class_II N-terminal domain of 3,4-dihydroxy	99.38
cd08351	123	ChaP_like ChaP, an enzyme involved in the biosynth	99.38
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	99.38
cd08362	120	BphC5-RrK37_N_like N-terminal, non-catalytic, doma	99.37
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	99.37
cd07261	114	Glo_EDI_BRP_like_11 This conserved domain belongs	99.36
cd09013	121	BphC-JF8_N_like N-terminal, non-catalytic, domain	99.36
cd08356	113	Glo_EDI_BRP_like_17 This conserved domain belongs	99.36
cd07251	121	Glo_EDI_BRP_like_10 This conserved domain belongs	99.36
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	99.35
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	99.35
cd08355	122	Glo_EDI_BRP_like_14 This conserved domain belongs	99.35
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	99.34
cd08343	131	ED_TypeI_classII_C C-terminal domain of type I, cl	99.34
cd08345	113	Fosfomycin_RP Fosfomycin resistant protein; inhibi	99.34
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	99.32
cd07244	121	FosA FosA, a Fosfomycin resistance protein, cataly	99.31
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	99.3
cd09014	166	BphC-JF8_C_like C-terminal, catalytic, domain of B	99.3
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	99.3
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	99.3
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	99.3
cd08349	112	BLMA_like Bleomycin binding protein (BLMA) and sim	99.3
cd07267	113	THT_Oxygenase_N N-terminal domain of 2,4,5-trihydr	99.29
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	99.28
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	99.28
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	99.27
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	99.27
cd07246	122	Glo_EDI_BRP_like_8 This conserved domain belongs t	99.26
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	99.26
cd07254	120	Glo_EDI_BRP_like_20 This conserved domain belongs	99.26
cd08354	122	Glo_EDI_BRP_like_13 This conserved domain belongs	99.26
cd08357	125	Glo_EDI_BRP_like_18 This conserved domain belongs	99.25
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	99.2
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	99.18
cd07251	121	Glo_EDI_BRP_like_10 This conserved domain belongs	99.15
cd08356	113	Glo_EDI_BRP_like_17 This conserved domain belongs	99.14
cd08350	120	BLMT_like BLMT, a bleomycin resistance protein enc	99.12
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	99.05
COG3565	138	Predicted dioxygenase of extradiol dioxygenase fam	98.99
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	98.97
COG0346	138	GloA Lactoylglutathione lyase and related lyases [	98.94
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	98.93
cd06588	128	PhnB_like Escherichia coli PhnB and similar protei	98.91
COG2764	136	PhnB Uncharacterized protein conserved in bacteria	98.88
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	98.85
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	98.83
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	98.74
COG3607	133	Predicted lactoylglutathione lyase [General functi	98.7
COG3607	133	Predicted lactoylglutathione lyase [General functi	98.64
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	98.6
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	98.51
PF14506	125	CppA_N: CppA N-terminal; PDB: 3E0R_D.	98.44
PRK01037	357	trmD tRNA (guanine-N(1)-)-methyltransferase/unknow	98.42
COG3565	138	Predicted dioxygenase of extradiol dioxygenase fam	98.35
cd06588	128	PhnB_like Escherichia coli PhnB and similar protei	98.32
COG0346	138	GloA Lactoylglutathione lyase and related lyases [	98.32
PRK10148	147	hypothetical protein; Provisional	98.2
PRK01037	357	trmD tRNA (guanine-N(1)-)-methyltransferase/unknow	98.14
COG2764	136	PhnB Uncharacterized protein conserved in bacteria	98.06
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	98.05
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	97.79
PF14696	139	Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, H	97.75
PF14696	139	Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, H	96.95
PRK10148	147	hypothetical protein; Provisional	96.94
PF06983	116	3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltrans	96.08
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	96.06
PF14507	101	CppA_C: CppA C-terminal; PDB: 3E0R_D.	95.7
PF15067	236	FAM124: FAM124 family	95.37
PF14506	125	CppA_N: CppA N-terminal; PDB: 3E0R_D.	95.02
PF14507	101	CppA_C: CppA C-terminal; PDB: 3E0R_D.	91.21
PF15067	236	FAM124: FAM124 family	85.93

>PLN02300 lactoylglutathione lyase

Probab=100.00  E-value=5.4e-40  Score=308.10  Aligned_cols=261  Identities=84%  Similarity=1.380  Sum_probs=215.7

Q ss_pred             CccccccccccccccccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCC
Q 018138           96 SNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV  175 (360)
Q Consensus        96 ~~~~~~~~~~~~~~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~  175 (360)
                      ++++.......|..+.+.+|.||+|.|+|++++++||+++|||++..+...++..+..+|+..++...++.+++....+.
T Consensus         6 ~~~~~~~~~~~~~~~~i~~l~Hv~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~   85 (286)
T PLN02300          6 STAAEAEDLLEWPKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSNFVVELTYNYGV   85 (286)
T ss_pred             ccChhhhhhhcCCccccceEEEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCcEEEEEEccCCCCCceEEEEeccCCC
Confidence            44567778889999999999999999999999999999999999987665555556678887765555677888764443


Q ss_pred             CCCcCCCcceEEEEEECCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCCCCCCceeceeeecCH
Q 018138          176 DKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDL  255 (360)
Q Consensus       176 ~~~~~g~g~~hi~f~V~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~~~~~i~hv~L~V~D~  255 (360)
                      .....+.++.|++|.|+|+++++++++++|+++..+|...++++..++||+||||+.|||++..+.+.++.|+.|.|+|+
T Consensus        86 ~~~~~~~g~~hia~~v~dvd~~~~~l~~~G~~i~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~~~~~~~~~~l~~~d~  165 (286)
T PLN02300         86 DKYDIGTGFGHFGIAVEDVAKTVELVKAKGGKVTREPGPVKGGKSVIAFVKDPDGYKFELIQRGPTPEPLCQVMLRVGDL  165 (286)
T ss_pred             CccccCCCccEEEEEeCCHHHHHHHHHHCCCeeecCCcccCCCceEEEEEECCCCCEEEEEeCCCCCCcceeEEEEeCCH
Confidence            33345568899999999999999999999999998887777665557899999999999999998899999999999999


Q ss_pred             HHHHHHhhhcceEEeeeccCCC----c--cE-E-------------EEEEeCCcccccCCCCeeEEEEEeCCHHHHHHHH
Q 018138          256 DRAINFYKKYTIAVMGYGPEDK----N--AV-L-------------ELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAI  315 (360)
Q Consensus       256 e~a~~FY~~~~~~~lG~~~~~~----~--~~-l-------------~l~~~~~~~~~~~g~g~~hiaf~V~Dl~~~~~~l  315 (360)
                      +++.+||++    +|||+....    .  .. .             ++..+.+...+..+++.||++|.|+|++++++++
T Consensus       166 ~~a~~Fy~~----~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~g~~~~~i~~~v~di~~~~~~~  241 (286)
T PLN02300        166 DRSIKFYEK----AFGMKLLRKRDNPEYKYTIAMMGYGPEDKTTVLELTYNYGVTEYTKGNAYAQIAIGTDDVYKTAEAI  241 (286)
T ss_pred             HHHHHHHHh----ccCCEEEeeecccccceEEEEEecCCCCCccEEEEeecCCCCccccCCceeEEEEecCCHHHHHHHH
Confidence            999999999    999985321    1  11 1             1111111112344688999999999999999999


Q ss_pred             HHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCcccccccC
Q 018138          316 KLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFLKELE  360 (360)
Q Consensus       316 ~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~  360 (360)
                      +++|+++..+|...|+..++.++|+||||+.++|++.++|++|||
T Consensus       242 ~~~G~~v~~~p~~~p~~~~~~~~~~DPdG~~i~~~~~~~~~~~~~  286 (286)
T PLN02300        242 KLVGGKITREPGPLPGINTKITACLDPDGWKTVFVDNIDFLKELE  286 (286)
T ss_pred             HHcCCeEecCCccCCCCceEEEEEECCCCCEEEEEccchhhhhcC
Confidence            999999999998888755689999999999999999999999987

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.7e-33  Score=243.77  Aligned_cols=247  Identities=51%  Similarity=0.871  Sum_probs=212.3

Q ss_pred             ccccccccccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCC-----------CCeEEEEEeeCCCCceEEEEEEe
Q 018138          103 NVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE-----------DRYTNAFLGYGPEDSHFVVELTY  171 (360)
Q Consensus       103 ~~~~~~~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~-----------~~~~~~~l~~g~~~~~~~lel~~  171 (360)
                      ..++|...+..+..|+++.|.|.+++++||+++|||++.+..++++           +.|+..++++|++..||++||+.
T Consensus         6 d~~~~~~~~~~r~LH~VfkVgdr~kti~Fyt~vlgMkvLRheef~egc~aacngpyd~kwSktmvGyGpEdshFViELTY   85 (299)
T KOG2943|consen    6 DLLCWMKADTRRALHYVFKVGDRAKTIDFYTEVLGMKVLRHEEFEEGCEAACNGPYDGKWSKTMVGYGPEDSHFVIELTY   85 (299)
T ss_pred             hhhhhhhccchheeeEeEeecchHHHHHHHHHhhcceeeehhhhhhhhhhhcCCCcccchhhhheecCCCcccEEEEEEe
Confidence            5789999999999999999999999999999999999999888877           77889999999999999999999


Q ss_pred             cCCCCCCcCCCcceEEEEEECCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCCCCCCceeceee
Q 018138          172 NYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLR  251 (360)
Q Consensus       172 ~~~~~~~~~g~g~~hi~f~V~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~~~~~i~hv~L~  251 (360)
                      ++++..+..|+++.|+.+.++|+-..++.+...|.+.         ++...+++.||||+.|+|++..+.+.+++.|+|+
T Consensus        86 NYgV~~YelGndfg~i~I~s~dv~~~ve~v~~p~~~~---------~g~~~~~v~dPdGykF~l~~~~p~s~pv~~V~l~  156 (299)
T KOG2943|consen   86 NYGVSKYELGNDFGGITIASDDVFSKVEKVNAPGGKG---------SGCGIAFVKDPDGYKFYLIDRGPQSDPVLQVMLN  156 (299)
T ss_pred             ccCccceeccCCcccEEEeHHHHHHHHHHhcCcCCcc---------cceEEEEEECCCCcEEEEeccCCCCCCeEEEEEE
Confidence            9999999999999999999999888888887766531         2344688999999999999999999999999999


Q ss_pred             ecCHHHHHHHhhh------------cceEEeeeccCCCccEEEEEEeCCcccccCCCCeeEEEEEeCCHHHHHHHHHHcC
Q 018138          252 VGDLDRAINFYKK------------YTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSG  319 (360)
Q Consensus       252 V~D~e~a~~FY~~------------~~~~~lG~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~Dl~~~~~~l~~~G  319 (360)
                      |.|+++|++||.+            ++.++|||..+  ++.+|++++++..++..|.|...+++..+++..+.+.++..+
T Consensus       157 VgdL~ks~kyw~~~lgM~ilekeek~t~~~mgYgd~--q~~LElt~~~~~id~~kg~griafaip~d~~~~l~e~iK~~n  234 (299)
T KOG2943|consen  157 VGDLQKSIKYWEKLLGMKILEKEEKYTRARMGYGDE--QCVLELTYNYDVIDRAKGFGRIAFAIPTDDLPKLQEAIKSAN  234 (299)
T ss_pred             ehhHHHHHHHHHHHhCcchhhhhhhhhhhhhccCCc--ceEEEEEeccCcccccccceeEEEeccccccccHHHHHHHhc
Confidence            9999999999996            33334444333  588999999999888888887777777899999999999997


Q ss_pred             CeEeeCCccc--CCC-CcEEEEEECCCCCeEEEEcCcccccccC
Q 018138          320 GKITREPGPL--PGI-NTKITACLDPDGWKSVFVDNLDFLKELE  360 (360)
Q Consensus       320 ~~i~~~p~~~--~~~-~~~~~~~~DPdG~~iel~~~~~~~~~~~  360 (360)
                      .+|..+..+.  |+. ...++.+.|||||.|+|+.+++|.++.+
T Consensus       235 ~~i~~~lttl~tPgka~vqvvil~DPDgheicfVdde~F~~lsk  278 (299)
T KOG2943|consen  235 GTILTPLTTLDTPGKATVQVVILADPDGHEICFVDDEGFRKLSK  278 (299)
T ss_pred             cccccceeeccCCCcceeEEEEEECCCCceEEEeccHHHHHHhc
Confidence            7766554433  332 2467889999999999999999998753

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.97  E-value=6.4e-29  Score=234.90  Aligned_cols=224  Identities=23%  Similarity=0.297  Sum_probs=163.7

Q ss_pred             cceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEE
Q 018138          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (360)
Q Consensus       112 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V  191 (360)
                      +++|+||.|.|+|++++++||+++|||++..+...      .+++.......++.+.+.+.       ...++.|++|.|
T Consensus         2 i~~i~Hi~l~V~Dle~s~~FY~~~LG~~~~~~~~~------~~~~~~~~~~~~~~~~l~~~-------~~~g~~hiaf~v   68 (303)
T TIGR03211         2 VMRLGHVELRVLDLEESLKHYTDVLGLEETGRDGQ------RVYLKAWDEWDHYSVILTEA-------DTAGLDHMAFKV   68 (303)
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeecCc------eEEEEeccccccceEeeccC-------CCCceeEEEEEe
Confidence            67899999999999999999999999999765321      24454322222344554432       124689999999


Q ss_pred             C---CHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCCC---------------------CCCcee
Q 018138          192 E---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT---------------------PEPLCQ  247 (360)
Q Consensus       192 ~---Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~~---------------------~~~i~h  247 (360)
                      +   |+++++++|+++|+++...|.....+....+||+||+|+.|||++....                     ..+++|
T Consensus        69 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~DPdG~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H  148 (303)
T TIGR03211        69 ESEADLERLVKRLEAYGVGTGWIPAGELPGVGRRVRFTLPSGHTMELYAEKEYVGELVGGLNPDPWPDPLRGVGARRLDH  148 (303)
T ss_pred             CCHHHHHHHHHHHHHcCCCeeeccCCCCCCcceEEEEECCCCCEEEEEEccccccccccccCCcccccccCCcCceeEEE
Confidence            8   7999999999999998766542222222368999999999999974421                     236899


Q ss_pred             ceeeecCHHHHHHHhhhcceEEeeeccCCC------c--cEEEEEEeCCccc--c--cCCCC-eeEEEEEeCC---HHHH
Q 018138          248 VMLRVGDLDRAINFYKKYTIAVMGYGPEDK------N--AVLELTYNHGVTE--Y--DKGNG-YAQIAIGTDD---VYKT  311 (360)
Q Consensus       248 v~L~V~D~e~a~~FY~~~~~~~lG~~~~~~------~--~~l~l~~~~~~~~--~--~~g~g-~~hiaf~V~D---l~~~  311 (360)
                      |.|.|+|++++.+||++    +|||+..+.      .  ....+........  .  ..+.+ ++|+||.|+|   ++++
T Consensus       149 i~l~V~Dl~~s~~FY~~----~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~Hiaf~v~~~~~v~~~  224 (303)
T TIGR03211       149 CLLYGEDVAENTRFFTE----VLGFRLTEQVVLGDGKEQAAAWLSVSNKAHDIAFVGDPEPGKLHHVSFFLDSWEDVLKA  224 (303)
T ss_pred             EeEEeCCHHHHHHHHHH----hcCCEEEeeEEcCCCcEEEEEEEEcCCCCcccceecCCCCCceEEEEEEcCCHHHHHHH
Confidence            99999999999999999    999975321      1  1122222111111  1  12345 8999999986   5568


Q ss_pred             HHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcC
Q 018138          312 AEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  352 (360)
Q Consensus       312 ~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  352 (360)
                      +++|+++|+++..+|.+++...++.+||+|||||.||++..
T Consensus       225 ~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~  265 (303)
T TIGR03211       225 ADVMSKNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFGG  265 (303)
T ss_pred             HHHHHhCCCceeeCCcccCCCCceEEEEECCCCCEEEEecC
Confidence            88999999999988887765446899999999999999844

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.97  E-value=1.2e-28  Score=231.94  Aligned_cols=224  Identities=27%  Similarity=0.335  Sum_probs=163.9

Q ss_pred             ccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEE
Q 018138          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  190 (360)
Q Consensus       111 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~  190 (360)
                      ++++|+||.|.|+|++++++||+++|||++..+..    .  .+++.......++.+.+...       ...++.|++|.
T Consensus         1 ~i~~i~hv~l~v~Dl~~s~~FY~~vLGl~~~~~~~----~--~~~~~~~~~~~~~~l~l~~~-------~~~~~~hiaf~   67 (294)
T TIGR02295         1 NILRTGHVELRVTDLDKSREFYVDLLGFRETESDK----E--YIYLRGIEEFQHHSLVLTKA-------PSAALSYIGFR   67 (294)
T ss_pred             CCceeeEEEEEeCCHHHHHHHHHHccCCEEEEecC----C--eEEEeccCcCCceEEEeeeC-------CCcCccEEEEE
Confidence            46899999999999999999999999999975532    1  35554322222344544432       12468899999


Q ss_pred             EC---CHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCC---------------CCCCceeceeee
Q 018138          191 VE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP---------------TPEPLCQVMLRV  252 (360)
Q Consensus       191 V~---Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~---------------~~~~i~hv~L~V  252 (360)
                      |+   |+++++++|+++|+++...+..  .+ ...+||+|||||.|||+....               .+.+++|+.|.|
T Consensus        68 v~~~~dl~~~~~~l~~~Gv~v~~~~~~--~~-~~~~~~~DPdG~~iEl~~~~~~~~~~~~~~~~~~~~~~~~i~Hv~l~v  144 (294)
T TIGR02295        68 VSKEEDLDKAADFFQKLGHPVRLVRDG--GQ-PEALRVEDPFGYPIEFYFEMEKVERLLRRYHRHRGVSPVRLDHFNVFV  144 (294)
T ss_pred             eCCHHHHHHHHHHHHhcCCcEEeecCC--CC-ceEEEEECCCCCEEEEEEchhhcccccccccccCCccceeeeeEEEEe
Confidence            97   7999999999999998765432  22 247999999999999996331               235789999999


Q ss_pred             cCHHHHHHHhhhcceEEeeeccCCC-----cc--EEEEEEeCCcc--cc--cCCCCeeEEEEEeCC---HHHHHHHHHHc
Q 018138          253 GDLDRAINFYKKYTIAVMGYGPEDK-----NA--VLELTYNHGVT--EY--DKGNGYAQIAIGTDD---VYKTAEAIKLS  318 (360)
Q Consensus       253 ~D~e~a~~FY~~~~~~~lG~~~~~~-----~~--~l~l~~~~~~~--~~--~~g~g~~hiaf~V~D---l~~~~~~l~~~  318 (360)
                      +|++++.+||++    +||++..+.     ..  ...+.......  ..  ..+++++|+||.|+|   +++++++|+++
T Consensus       145 ~dl~~a~~Fy~~----~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Hiaf~v~d~~~v~~~~~~l~~~  220 (294)
T TIGR02295       145 PDVQRALRFYKE----ELGFRVTEYTEDDEGNLAAAWLHRKGGVHDIALTNGNGPRLHHIAYWVHDPLNIIKACDILASA  220 (294)
T ss_pred             CCHHHHHHHHHH----hcCCEEEEEeccCCCcEEEEEEecCCCcCceEeecCCCCceeeEEEEcCCHHHHHHHHHHHHhC
Confidence            999999999999    999975321     11  11121111111  11  124678999999988   55678999999


Q ss_pred             CCe--EeeCCcccCCCCcEEEEEECCCCCeEEEEcCcc
Q 018138          319 GGK--ITREPGPLPGINTKITACLDPDGWKSVFVDNLD  354 (360)
Q Consensus       319 G~~--i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  354 (360)
                      |++  +..+|+.++.+..+++|++||+|+.|||+....
T Consensus       221 G~~~~~~~~p~~~~~~~~~~~y~~DP~G~~iEl~~~~~  258 (294)
T TIGR02295       221 GLSDSIERGPGRHGVSNAFFLYLRDPDGHRIELYTGDY  258 (294)
T ss_pred             CCCcccccCCccCCCCcceEEEEECCCCCEEEEEeccc
Confidence            998  777787776655678999999999999987654

The enzyme from Bacillus brevis contains manganese.

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.96  E-value=8.2e-28  Score=225.59  Aligned_cols=223  Identities=19%  Similarity=0.252  Sum_probs=164.4

Q ss_pred             cceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEE
Q 018138          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (360)
Q Consensus       112 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V  191 (360)
                      +.+|+||+|.|+|++++++||+++|||++..+.+  .   ...|+..+..  ++.+.+....       ..++.|++|.|
T Consensus         1 ~~~i~~v~l~V~Dl~~s~~FY~~~LGl~~~~~~~--~---~~~~~~~~~~--~~~~~l~~~~-------~~~~~~~~f~V   66 (286)
T TIGR03213         1 VRGLGYLGIGVSDVDAWREFATEVLGMMVASEGE--N---DALYLRLDSR--AHRIAVHPGE-------SDDLAYAGWEV   66 (286)
T ss_pred             CceeeEEEEEeCCHHHHHHHHHhccCcccccCCC--C---ceEEEEcCCC--ceEEEEEECC-------cCCeeeEeeee
Confidence            4689999999999999999999999999864321  1   1246666432  3445554321       13578999999


Q ss_pred             CC---HHHHHHHHHHcCCeEecCCeec--CCCCEEEEEEECCCCCEEEEeecCCC------------------CCCceec
Q 018138          192 ED---VAKTVDLVKAKGGKVTREPGPV--KGGNTVIAFIEDPDGYKFELLERGPT------------------PEPLCQV  248 (360)
Q Consensus       192 ~D---ld~~~~rL~~~G~~~~~~p~~~--~~g~~~~~~~~DPdG~~iEl~~~~~~------------------~~~i~hv  248 (360)
                      +|   ++++.++|+++|+++...|...  ..+....++|.|||||.+|++.....                  +.+++||
T Consensus        67 ~~~~~l~~~~~~L~~~Gv~~~~~~~~~~~~~~~~~~~~f~DPdGn~lEl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Hv  146 (286)
T TIGR03213        67 ADEAGLDQVKEKLEKAGVAVTVASAAEARERGVLGLIKFTDPGGNPLEIYYGAVEDFEKPFVSPRAVSGFVTGDQGLGHI  146 (286)
T ss_pred             CCHHHHHHHHHHHHHcCCceEECCHHHhhhccceEEEEEECCCCCEEEEEEcccccCCCCCCCCCCCCccccCCccccEE
Confidence            98   8999999999999988765421  12334469999999999999963321                  2379999


Q ss_pred             eeeecCHHHHHHHhhhcceEEeeeccCCC-------c---cEEEEEEeCCcc-----cccCCCCeeEEEEEeCCHHH---
Q 018138          249 MLRVGDLDRAINFYKKYTIAVMGYGPEDK-------N---AVLELTYNHGVT-----EYDKGNGYAQIAIGTDDVYK---  310 (360)
Q Consensus       249 ~L~V~D~e~a~~FY~~~~~~~lG~~~~~~-------~---~~l~l~~~~~~~-----~~~~g~g~~hiaf~V~Dl~~---  310 (360)
                      .|.|+|++++.+||++    +|||+..+.       .   ....+..+....     ..+...+++|++|.|+|+++   
T Consensus       147 ~l~v~Dle~s~~FY~~----~LGf~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~l~~~~~~~~~~Hiaf~v~d~~~v~~  222 (286)
T TIGR03213       147 VLRVPDVDAALAFYTE----VLGFQLSDVIDLPAGPGVTVRPYFLHCNERHHSLAFAAGPSEKRLNHLMLEVDTLDDVGL  222 (286)
T ss_pred             EEEcCCHHHHHHHHHH----ccCCeEEEeEcccCCCCCcceEEEEEECCCcceEEEecCCCCCceEEEEEEcCCHHHHHH
Confidence            9999999999999999    999985321       1   122333321111     11224689999999987665   


Q ss_pred             HHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCc
Q 018138          311 TAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  353 (360)
Q Consensus       311 ~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  353 (360)
                      ++++|+++|+ +...|++++.+..+++|++||+|++||+....
T Consensus       223 ~~~~l~~~G~-~~~~~~r~~~~~~~~~y~~DP~G~~iE~~~~~  264 (286)
T TIGR03213       223 ALDRVDADGI-VASTLGRHTNDHMVSFYVATPSGWLVEYGWGA  264 (286)
T ss_pred             HHHHHHHCCC-EEecCCcCCCCCeEEEEEECCCCcEEEeecCc
Confidence            8999999999 66777777766678999999999999998654

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>PLN02367 lactoylglutathione lyase

Probab=99.84  E-value=3.6e-19  Score=158.96  Aligned_cols=128  Identities=37%  Similarity=0.681  Sum_probs=105.1

Q ss_pred             ccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCC---------------ceEEEEEEecCCC
Q 018138          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPED---------------SHFVVELTYNYGV  175 (360)
Q Consensus       111 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~---------------~~~~lel~~~~~~  175 (360)
                      .-..+.|++|+|+|++++++||+++|||++..+.++++.+++.+|+++++..               ....|||.++.+.
T Consensus        72 ~~~~~~HtmlRVkDle~Sl~FYt~vLGm~ll~r~d~pe~~f~lyFL~~~~~~~~p~d~~~r~~~~~~~~~~LELt~n~g~  151 (233)
T PLN02367         72 KGYIMQQTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQKATIELTHNWGT  151 (233)
T ss_pred             CCcEEEEEEEEeCCHHHHHHHHHHhcCCEEeEEEecCCCcEEEEEeecCCccccccccccceeeccCCCCEEEEecCCCC
Confidence            4567999999999999999999999999999999888888999999764321               1357999876553


Q ss_pred             C------CCcCC----CcceEEEEEECCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCC
Q 018138          176 D------KYDIG----TGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (360)
Q Consensus       176 ~------~~~~g----~g~~hi~f~V~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~  240 (360)
                      .      .+..+    .|++|++|.|+|+++++++|+++|+++..+|....+  ..++|++||||+.|||++...
T Consensus       152 e~~~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~erL~a~Gv~~v~~P~~g~~--~riaFIkDPDGn~IEL~e~~~  224 (233)
T PLN02367        152 ESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFEELGVEFVKKPNDGKM--KGIAFIKDPDGYWIEIFDLKT  224 (233)
T ss_pred             CccccchhcccCCCCCCCceEEEEEcCCHHHHHHHHHHCCCEEEeCCccCCc--eEEEEEECCCCCEEEEEeccc
Confidence            3      13333    489999999999999999999999999887765332  346899999999999999765

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=99.82  E-value=9.9e-19  Score=148.34  Aligned_cols=136  Identities=63%  Similarity=1.090  Sum_probs=105.5

Q ss_pred             ccccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEE
Q 018138          109 KSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFG  188 (360)
Q Consensus       109 ~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~  188 (360)
                      ....++|+||.|.|+|++++.+||+++|||++..+.+.++..+..+++..++......+++...........+.++.|++
T Consensus        12 ~~~~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~hi~   91 (150)
T TIGR00068        12 KTKKRRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSAAVIELTHNWGTEKYDLGNGFGHIA   91 (150)
T ss_pred             ccCCceEEEEEEEecCHHHHHHHHHHhcCCEEEEEeccCCCceEEEEecCCCCCCccEEEEeecCCCCcccCCCceeEEE
Confidence            45678999999999999999999999999999766554444455667766544444566665433322233455789999


Q ss_pred             EEECCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCCCCCC
Q 018138          189 IAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEP  244 (360)
Q Consensus       189 f~V~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~~~~~  244 (360)
                      |.|+|+++++++|.++|+++..+|...+.+....+||+||+|+.|||++......+
T Consensus        92 f~v~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~  147 (150)
T TIGR00068        92 IGVDDVYKACERVRALGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQRKSTKDG  147 (150)
T ss_pred             EecCCHHHHHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEECCchhhh
Confidence            99999999999999999999888766666656678999999999999998765433

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>PRK10291 glyoxalase I; Provisional

Probab=99.81  E-value=9.9e-19  Score=144.30  Aligned_cols=125  Identities=56%  Similarity=1.044  Sum_probs=98.6

Q ss_pred             EEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEECCHHHHHH
Q 018138          120 YRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVD  199 (360)
Q Consensus       120 l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~Dld~~~~  199 (360)
                      |.|+|++++++||+++|||++..+...++..+..+++..++......+++.......++..+.+++|++|+|+|++++++
T Consensus         2 l~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~hlaf~V~d~~~~~~   81 (129)
T PRK10291          2 LRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEACE   81 (129)
T ss_pred             EEecCHHHHHHHHHhccCCEEEEeecCCCCcEEEEEEccCCCCCcceEEeeecCCCCCCcCCCCeeEEEEEeCCHHHHHH
Confidence            78999999999999999999987665565667788887665444456777654333334456689999999999999999


Q ss_pred             HHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCCCCCC
Q 018138          200 LVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEP  244 (360)
Q Consensus       200 rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~~~~~  244 (360)
                      +|+++|+++..++....++...++||.||||+.|||++....+.+
T Consensus        82 ~l~~~G~~~~~~~~~~~~~~~~~~~i~DPdG~~iel~~~~~~~~~  126 (129)
T PRK10291         82 KIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDAGRG  126 (129)
T ss_pred             HHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEEccccccc
Confidence            999999999877766666655678899999999999997754433

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=99.81  E-value=5.5e-18  Score=163.60  Aligned_cols=231  Identities=21%  Similarity=0.333  Sum_probs=153.2

Q ss_pred             ceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCC------CcCCCcceE
Q 018138          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK------YDIGTGFGH  186 (360)
Q Consensus       113 ~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~------~~~g~g~~h  186 (360)
                      ++++||.+.|+|++++.+||++.|||++..+....... ..+.++.|    ...+++..+.....      ...+.|+.|
T Consensus         1 ~~i~hi~~~V~D~~~a~~~y~~~LGf~~~~~~~~~~~~-~~~~~~~G----~~~l~L~~~~~~~s~~~~~~~~hg~gv~~   75 (353)
T TIGR01263         1 DGFDFVEFYVGDAKQAAYYYFTRFGFEKVAKETGHREK-ASHVLRQG----QINFVLTAPYSSDSPAADFAAKHGDGVKD   75 (353)
T ss_pred             CceEEEEEEeCCHHHHHHHHHHhcCCcEEEEeecCCce-eEEEEEeC----CEEEEEecCCCCCchHHHHHHhCCCceEE
Confidence            46899999999999999999999999998763222222 22333332    24677765432221      125789999


Q ss_pred             EEEEECCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCC-------------------------C
Q 018138          187 FGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP-------------------------T  241 (360)
Q Consensus       187 i~f~V~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~-------------------------~  241 (360)
                      ++|+|+|+++++++++++|+++..+|.....|...+.-+..++|..+.|+++..                         .
T Consensus        76 iaf~V~Dv~~a~~~l~~~Ga~~v~~p~~~~~g~~~~~~i~~~g~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (353)
T TIGR01263        76 VAFRVDDAAAAFEAAVERGAEPVQAPVELDEGAVTLATIKGIGDVVHTLVDRGGYKGSFYPGFFESLLDAALHEPPPGVG  155 (353)
T ss_pred             EEEEECCHHHHHHHHHHCCCEeccCCccCCCCeEEEEEEECcCCCEEEEEcCCCCCCCCCCCccccccccccccCCCCCC
Confidence            999999999999999999999987766431122223333445555555544210                         0


Q ss_pred             CCCceeceeeec--CHHHHHHHhhhcceEEeeeccCC--------------------CccEEEEEEeCC---cc------
Q 018138          242 PEPLCQVMLRVG--DLDRAINFYKKYTIAVMGYGPED--------------------KNAVLELTYNHG---VT------  290 (360)
Q Consensus       242 ~~~i~hv~L~V~--D~e~a~~FY~~~~~~~lG~~~~~--------------------~~~~l~l~~~~~---~~------  290 (360)
                      ..+++||++.|.  |++++.+||++    +||++...                    ....+++.....   ..      
T Consensus       156 ~~~iDHv~i~V~~~dl~~~~~fY~~----~lGf~~~~~~~~~~~~~~~~s~~~~~~~g~~~i~L~ep~~~~~~s~i~~fl  231 (353)
T TIGR01263       156 LIAIDHLVGNVYRGQMEPWAEFYEK----IFGFREIRSFDIKTEYSALNSIVMASPDGKVKIPLNEPASGKDKSQIEEFL  231 (353)
T ss_pred             eEEeeeeEcccCCccHHHHHHHHHH----HhCCceeeEEEeccCCccEEEEEEECCCCcEEEEEeccCCCCCCCHHHHHH
Confidence            125999999999  99999999999    89986421                    011122222100   11      


Q ss_pred             cccCCCCeeEEEEEeCCHHHHHHHHHHcCCeEeeCCcc--------cC---C------CCcEEEEEECCCCCeEEEEcC
Q 018138          291 EYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGP--------LP---G------INTKITACLDPDGWKSVFVDN  352 (360)
Q Consensus       291 ~~~~g~g~~hiaf~V~Dl~~~~~~l~~~G~~i~~~p~~--------~~---~------~~~~~~~~~DPdG~~iel~~~  352 (360)
                      ....|.|++|+||.|+|+++++++|+++|+++...|..        .+   .      ....+.+=+|.+|.++.++..
T Consensus       232 ~~~~g~Gv~HiAf~vdDi~~~~~~l~~~Gv~~l~~P~~yY~~l~~r~~~~~~~~~~~l~~~~iL~D~d~~g~llqift~  310 (353)
T TIGR01263       232 EFYNGAGVQHIALNTDDIVRTVRALRARGVEFLDTPDTYYDLLGERLGGHVKEDLDTLRELNILIDGDEDGYLLQIFTK  310 (353)
T ss_pred             HHcCCCCccEEEEEcCCHHHHHHHHHHcCCccCcCCHHHHHHHHHHhcccccchHHHHHHCCEEEecCCCceEEEEecc
Confidence            12247899999999999999999999999999987721        11   0      011245556777777776654

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=99.81  E-value=2.6e-18  Score=153.77  Aligned_cols=152  Identities=24%  Similarity=0.361  Sum_probs=118.4

Q ss_pred             cccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCC-CCCcCCCcceEEE
Q 018138          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV-DKYDIGTGFGHFG  188 (360)
Q Consensus       110 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~-~~~~~g~g~~hi~  188 (360)
                      ...+.+..|.|.|+|++++..||+++||+++..+.+.      .+-+..+..   ..|.|.+.+.. .......|+.|++
T Consensus         6 ~~~~~v~~v~L~vrdL~~~~~FY~~ilGL~v~~~~~~------~v~L~vgg~---~LL~L~q~~~a~~~~~~~aGLyH~A   76 (265)
T COG2514           6 TTPTFVGAVTLNVRDLDSMTSFYQEILGLQVLEETDG------SVTLGVGGT---PLLTLEQFPDARRPPPRAAGLYHTA   76 (265)
T ss_pred             CCCcEEEEEEEEeccHHHHHHHHHHhhCCeeeeccCc------eEEEeeCCE---EEEEEEeCCCCCCCCccccceeeee
Confidence            4567889999999999999999999999999876542      355665533   45666664332 2224567999999


Q ss_pred             EEECC---HHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCCC------------------------
Q 018138          189 IAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT------------------------  241 (360)
Q Consensus       189 f~V~D---ld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~~------------------------  241 (360)
                      |.+++   +.+++.++...|..+.. .  .++.....+||.||+||.||++..++.                        
T Consensus        77 fLlP~r~~L~~~l~hl~~~~~~l~G-a--~DH~vSEAlYl~DPEGNGIEiYaDrp~~~W~~~~~~v~m~t~~ld~~~ll~  153 (265)
T COG2514          77 FLLPTREDLARVLNHLAEEGIPLVG-A--SDHLVSEALYLEDPEGNGIEIYADRPRSTWDWQNDQVKMDTEPLDVEALLE  153 (265)
T ss_pred             eecCCHHHHHHHHHHHHhcCCcccc-c--CcchhheeeeecCCCCCeEEEEecCChHHhcccCCeeeecccccCHHHHhh
Confidence            99985   88889999999998762 2  334445579999999999999987541                        


Q ss_pred             ------------CCCceeceeeecCHHHHHHHhhhcceEEeeeccCCC
Q 018138          242 ------------PEPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK  277 (360)
Q Consensus       242 ------------~~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~  277 (360)
                                  ...|+||+|.|.|++++.+||++    .|||+....
T Consensus       154 ~~~~~~~~g~p~~t~IGHvHL~v~~l~eA~~fY~~----~LG~~~~~~  197 (265)
T COG2514         154 EATKEPWTGLPAGTIIGHVHLKVADLEEAEQFYED----VLGLEVTAR  197 (265)
T ss_pred             hccccccccCCCCcEEeEEEEEeCCHHHHHHHHHH----hcCCeeeec
Confidence                        23689999999999999999999    999976543

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=99.78  E-value=1e-17  Score=146.54  Aligned_cols=129  Identities=35%  Similarity=0.655  Sum_probs=101.2

Q ss_pred             cccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCC---------------ceEEEEEEecCC
Q 018138          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPED---------------SHFVVELTYNYG  174 (360)
Q Consensus       110 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~---------------~~~~lel~~~~~  174 (360)
                      +.--++.|++|+|+|++++++||+++|||++..+...++.+++.+|+.+++..               ....|||.++..
T Consensus        23 ~~~~~~~Ht~i~V~Dle~Si~FY~~vLG~~~~~r~~~~~~~~~~~fl~~~~~~~~~~~~~~~~~~l~~~~~~lEL~~~~~  102 (185)
T PLN03042         23 TKGYIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTDPPERTVWTFGRKATIELTHNWG  102 (185)
T ss_pred             CCCcEEEEEEEeeCCHHHHHHHHHhhcCCEEEEEEEcCCCceEEEEEecCCcccCCcchhhcccccccCCCEEEEEEcCC
Confidence            34578999999999999999999999999999887777777888888754311               134789987543


Q ss_pred             CCC------Cc----CCCcceEEEEEECCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCC
Q 018138          175 VDK------YD----IGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (360)
Q Consensus       175 ~~~------~~----~g~g~~hi~f~V~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~  240 (360)
                      ...      +.    .+.|+.|++|.|+|+++++++|+++|+.+...|.... + ..++|++||||+.|||++...
T Consensus       103 ~~~~p~~~~~~~~~~~~~G~~Hlaf~V~Dvd~~~~~L~~~Gv~v~~~p~~~~-~-~~~~fi~DPdG~~IEl~e~~~  176 (185)
T PLN03042        103 TESDPEFKGYHNGNSDPRGFGHIGITVDDVYKACERFEKLGVEFVKKPDDGK-M-KGLAFIKDPDGYWIEIFDLKR  176 (185)
T ss_pred             CcccccccccccCCCCCCCccEEEEEcCCHHHHHHHHHHCCCeEEeCCccCC-c-eeEEEEECCCCCEEEEEECCC
Confidence            221      21    1248999999999999999999999999987664322 2 446888999999999999664

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=99.77  E-value=2.9e-17  Score=133.20  Aligned_cols=120  Identities=53%  Similarity=0.923  Sum_probs=92.5

Q ss_pred             eEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCC-CCCcCCCcceEEEEEECC
Q 018138          115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV-DKYDIGTGFGHFGIAVED  193 (360)
Q Consensus       115 l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~-~~~~~g~g~~hi~f~V~D  193 (360)
                      +.||+|.|+|++++.+||+++|||++..+...++..+..+++..+....+..+++...... .....+.+..|++|.++|
T Consensus         1 ~~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~v~d   80 (121)
T cd07233           1 FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWGTEEPYDNGNGFGHLAFAVDD   80 (121)
T ss_pred             CeeEEEEecCcHHHHHHHHhccCCeEEEEEecCCCceEEEEecCCCCCCccEEEEEecCCCCCCcCCCCCeEEEEEEeCC
Confidence            5799999999999999999999999987655444456667777654112446666653322 222344578999999999


Q ss_pred             HHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEe
Q 018138          194 VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  236 (360)
Q Consensus       194 ld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~  236 (360)
                      +++++++++++|+++..+|... .+ ..++||+||+|+.+|++
T Consensus        81 id~~~~~l~~~G~~~~~~~~~~-~~-~~~~~~~DpdG~~iE~~  121 (121)
T cd07233          81 VYAACERLEEMGVEVTKPPGDG-GM-KGIAFIKDPDGYWIELI  121 (121)
T ss_pred             HHHHHHHHHHCCCEEeeCCccC-CC-ceEEEEECCCCCEEEeC
Confidence            9999999999999999887765 33 34689999999999985

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.76  E-value=2.5e-17  Score=137.98  Aligned_cols=123  Identities=26%  Similarity=0.322  Sum_probs=91.5

Q ss_pred             cceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCC-----------CCeEEEEEeeCCCCceEEEEEEecCCCCC---
Q 018138          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE-----------DRYTNAFLGYGPEDSHFVVELTYNYGVDK---  177 (360)
Q Consensus       112 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~-----------~~~~~~~l~~g~~~~~~~lel~~~~~~~~---  177 (360)
                      +.+++||+|.|+|++++.+||++ |||++..+...++           .....+++....  ....+++.....+..   
T Consensus         1 ~~~i~Hi~i~v~Dl~~s~~FY~~-LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~--g~~~iel~~~~~~~~~~~   77 (142)
T cd08353           1 VSRMDNVGIVVRDLEAAIAFFLE-LGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTPD--GHSRLELSKFHHPAVIAD   77 (142)
T ss_pred             CceeeeEEEEeCCHHHHHHHHHH-cCCEEccccccChHHHHHhcCCCCceEEEEEEeCCC--CCceEEEEEecCCCCcCc
Confidence            46899999999999999999998 9999875533221           123445555322  245688776322111   


Q ss_pred             ----CcCCCcceEEEEEECCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeec
Q 018138          178 ----YDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (360)
Q Consensus       178 ----~~~g~g~~hi~f~V~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~  238 (360)
                          ...+.|+.|+||.|+|+++++++|+++|+++..++....++. +.+|++||||+.|||+|.
T Consensus        78 ~~~~~~~~~g~~hia~~v~d~d~~~~~l~~~G~~~~~~~~~~~~~~-r~~~~~DPdG~~iEl~e~  141 (142)
T cd08353          78 HRPAPVNALGLRRVMFAVDDIDARVARLRKHGAELVGEVVQYENSY-RLCYIRGPEGILIELAEQ  141 (142)
T ss_pred             CCCCCCCCCCceEEEEEeCCHHHHHHHHHHCCCceeCCceecCCCe-EEEEEECCCCCEEEeeec
Confidence                123457899999999999999999999999988776655554 469999999999999984

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=99.75  E-value=1.1e-17  Score=142.45  Aligned_cols=119  Identities=26%  Similarity=0.378  Sum_probs=91.4

Q ss_pred             eeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCC-CCCeEEEEEeeCCCC---ceEEEEEEecCCCCCCcCCCcceEEEE
Q 018138          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIP-EDRYTNAFLGYGPED---SHFVVELTYNYGVDKYDIGTGFGHFGI  189 (360)
Q Consensus       114 ~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~-~~~~~~~~l~~g~~~---~~~~lel~~~~~~~~~~~g~g~~hi~f  189 (360)
                      +|+||+|.|+|++++++||+++|||++..+...+ ......+|+.+++..   .++.+.+..       ..+.+++|+||
T Consensus         1 ri~Hv~l~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-------~~~~g~~Hiaf   73 (153)
T cd07257           1 RLGHVVLEVPDFAASFDWYTETFGLKPSDVIYLPGPGNPVAAFLRLDRGEEYVDHHTLALAQ-------GPESGVHHAAF   73 (153)
T ss_pred             CccEEEEecCCHHHHHHHHHHhcCCeEEeeEecCCCCCcEEEEEecCCCCCcccchHHHHhc-------CCCCceeEEEE
Confidence            5899999999999999999999999997654433 233456777764321   111222221       11458999999


Q ss_pred             EECCHHHHH---HHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecC
Q 018138          190 AVEDVAKTV---DLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (360)
Q Consensus       190 ~V~Dld~~~---~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~  239 (360)
                      +|+|++++.   ++|+++|+++.++|+.+..+...++|++||+||.|||+...
T Consensus        74 ~v~die~~~~~~~~L~~~Gv~v~~~~g~~~~g~~~~~y~~DPdG~~iEl~~~~  126 (153)
T cd07257          74 EVHDFDAQGLGHDYLREKGYEHVWGVGRHILGSQIFDYWFDPWGFIVEHYTDG  126 (153)
T ss_pred             EcCCHHHHHHHHHHHHHCCCcEeecCCccCCCCCEEEEEECCCCCEEEEEcCc
Confidence            999999986   99999999999888877666666789999999999999765

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>PRK11478 putative lyase; Provisional

Probab=99.75  E-value=4.9e-17  Score=133.67  Aligned_cols=123  Identities=21%  Similarity=0.296  Sum_probs=86.4

Q ss_pred             ccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCC-CCeEEEEEeeCCCCceEEEEEEecCCC---CCCcCCCcceE
Q 018138          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE-DRYTNAFLGYGPEDSHFVVELTYNYGV---DKYDIGTGFGH  186 (360)
Q Consensus       111 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~-~~~~~~~l~~g~~~~~~~lel~~~~~~---~~~~~g~g~~h  186 (360)
                      .+.+++||+|.|+|++++++||+++|||++..+...+. ..+. ..+..+.   +..+++......   .......|+.|
T Consensus         3 ~i~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~-~~~~~~~---~~~l~l~~~~~~~~~~~~~~~~g~~h   78 (129)
T PRK11478          3 GLKQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWK-GDLALNG---QYVIELFSFPFPPERPSRPEACGLRH   78 (129)
T ss_pred             CcceecEEEEEcCCHHHHHHHHHHHhCCEecccccccccccce-eeEecCC---CcEEEEEEecCCCCCCCCCCCCceeE
Confidence            46789999999999999999999999999864322111 1111 1222221   346776642211   11122357899


Q ss_pred             EEEEECCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeec
Q 018138          187 FGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (360)
Q Consensus       187 i~f~V~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~  238 (360)
                      ++|.|+|+++++++|+++|+++...+....+|. .++||+||||+.|||++.
T Consensus        79 i~f~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~-~~~~~~DPdG~~iEl~~~  129 (129)
T PRK11478         79 LAFSVDDIDAAVAHLESHNVKCEAIRVDPYTQK-RFTFFNDPDGLPLELYEQ  129 (129)
T ss_pred             EEEEeCCHHHHHHHHHHcCCeeeccccCCCCCC-EEEEEECCCCCEEEEEeC
Confidence            999999999999999999999865433333443 478999999999999873

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.75  E-value=6.9e-17  Score=132.70  Aligned_cols=115  Identities=46%  Similarity=0.897  Sum_probs=89.4

Q ss_pred             ceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCC-----------CCeEEEEEeeCCCCceEEEEEEecCCCCCCcCC
Q 018138          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE-----------DRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIG  181 (360)
Q Consensus       113 ~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~-----------~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g  181 (360)
                      .++.|++|+|+|+++|++||+++|||++..+.++++           ..+..+++.+++...+..+||.++.+...+..|
T Consensus         1 ~~~~Hv~irV~DlerSi~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~lEL~~n~~~~~~~~g   80 (127)
T cd08358           1 RRALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPEDDHFVVELTYNYGIGDYELG   80 (127)
T ss_pred             CceEEEEEEeCCHHHHHHHHHHhcCCEEEeeecCccccccccccCCCCcEEEEEEecCCCCCccEEEeEecCCCCCCCCC
Confidence            368999999999999999999999999988766654           344456676654455678999987665555555


Q ss_pred             CcceEEEEEECCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEee
Q 018138          182 TGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (360)
Q Consensus       182 ~g~~hi~f~V~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~  237 (360)
                      .+  |++|.|++. ++.++|+++|+++...|.    +   +++++||||+.|||+.
T Consensus        81 ~~--~~hlav~~~-d~~~~l~~~Gv~~~~~~~----~---~~fi~DPDG~~ie~~~  126 (127)
T cd08358          81 ND--FLGITIHSK-QAVSNAKKHNWPVTEVED----G---VYEVKAPGGYKFYLID  126 (127)
T ss_pred             CC--EEEEEEECH-HHHHHHHHCCCceecCCC----C---EEEEECCCCCEEEEec
Confidence            55  677777776 456999999999886544    2   6899999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07243 2_3_CTD_C C-terminal domain of catechol 2,3-dioxygenase

Probab=99.75  E-value=6.4e-17  Score=136.22  Aligned_cols=119  Identities=17%  Similarity=0.252  Sum_probs=88.9

Q ss_pred             ccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCC-eEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEE
Q 018138          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDR-YTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGI  189 (360)
Q Consensus       111 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~-~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f  189 (360)
                      .+++|+||+|.|+|++++.+||+++|||++..+...++.. ...+|+..+..  ++.+.+...       ++.+++|++|
T Consensus         3 ~~~~l~Hv~l~v~Dle~s~~FY~~vLGf~~~~~~~~~~~~~~~~~~l~~~~~--~h~~~~~~~-------~~~~~~Hiaf   73 (143)
T cd07243           3 GAHRLDHCLLTGEDIAETTRFFTDVLDFYLAERVVDPDGGTRVGSFLSCSNK--PHDIAFVGG-------PDGKLHHFSF   73 (143)
T ss_pred             CCceeCEEEEecCCHHHHHHHHHHhcCCEEEEEEecCCCCeEEEEEEecCCC--cceEEEecC-------CCCCceEEEE
Confidence            4678999999999999999999999999987664332221 23456665433  344554332       1247899999


Q ss_pred             EECCHHH---HHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeec
Q 018138          190 AVEDVAK---TVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (360)
Q Consensus       190 ~V~Dld~---~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~  238 (360)
                      .|+|+++   +.++|+++|+++..+|.++..+....+||.|||||.|||+..
T Consensus        74 ~v~d~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~yf~DPdG~~iEl~~~  125 (143)
T cd07243          74 FLESWEDVLKAGDIISMNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFAG  125 (143)
T ss_pred             EcCCHHHHHHHHHHHHHcCCceEECCcCCCCCCceEEEEECCCCCEEEEecC
Confidence            9999777   578999999998877766553333469999999999999864

This subfamily contains the C-terminal, catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the C-terminal domain.

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.74  E-value=6.8e-17  Score=131.48  Aligned_cols=119  Identities=24%  Similarity=0.387  Sum_probs=88.7

Q ss_pred             eeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCC---CcCCCcceEEEEE
Q 018138          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK---YDIGTGFGHFGIA  190 (360)
Q Consensus       114 ~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~---~~~g~g~~hi~f~  190 (360)
                      +++||+|.|+|++++++||+++|||++..+...+...+..+|+..++   ...+++.+......   .....|+.|++|.
T Consensus         1 ~~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~g~~hi~f~   77 (125)
T cd07241           1 KIEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGFESYFLSFDD---GARLELMTRPDIAPSPNEGERTGWAHLAFS   77 (125)
T ss_pred             CceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEecCC---CcEEEEEcCcccCCCcccCCCCceEEEEEE
Confidence            57999999999999999999999999865543333444556776642   24577765332211   1233578999999


Q ss_pred             EC---CHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEe
Q 018138          191 VE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  236 (360)
Q Consensus       191 V~---Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~  236 (360)
                      |+   |+++++++|+++|+++..+|...++|.+ .++++|||||.|||.
T Consensus        78 v~~~~~v~~~~~~l~~~g~~~~~~~~~~~~g~~-~~~~~DPdG~~iE~~  125 (125)
T cd07241          78 VGSKEAVDELTERLRADGYLIIGEPRTTGDGYY-ESVILDPEGNRIEIT  125 (125)
T ss_pred             CCCHHHHHHHHHHHHHCCCEEEeCceecCCCeE-EEEEECCCCCEEEeC
Confidence            96   4899999999999999887765555543 477999999999983

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=99.73  E-value=1.7e-16  Score=131.98  Aligned_cols=118  Identities=25%  Similarity=0.324  Sum_probs=91.2

Q ss_pred             ceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEEC
Q 018138          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVE  192 (360)
Q Consensus       113 ~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~  192 (360)
                      .+|+||+|.|+|++++++||+++|||++..+..  .   ..+|+..+....++.+.+.....     ...+++|++|.|+
T Consensus         2 ~~l~hi~l~v~dl~~s~~FY~~vlGl~~~~~~~--~---~~~~~~~~~~~~~~~i~l~~~~~-----~~~g~~hiaf~v~   71 (134)
T cd08360           2 RRLGHVVLFVPDVEAAEAFYRDRLGFRVSDRFK--G---RGAFLRAAGGGDHHNLFLIKTPA-----PMAGFHHAAFEVG   71 (134)
T ss_pred             ceeeEEEEEcCCHHHHHHHHHHhcCCEEEEEec--C---cEEEEECCCCCCCcEEEEecCCC-----CCCcceEEEEEeC
Confidence            589999999999999999999999999875432  1   24677665333355676654322     1358999999999


Q ss_pred             CHHHHH---HHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCC
Q 018138          193 DVAKTV---DLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (360)
Q Consensus       193 Dld~~~---~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~  240 (360)
                      |++++.   ++|+++|+++..+|...+.++..++||+||+|+.|||.....
T Consensus        72 d~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~y~~DP~G~~iEl~~~~~  122 (134)
T cd08360          72 DIDEVMLGGNHMLRAGYQTGWGPGRHRIGSNYFWYFRDPWGGEVEYGADMD  122 (134)
T ss_pred             CHHHHHHHHHHHHHcCCccccCCCCcCCCccEEEEEECCCCCEEEEEcccc
Confidence            877765   699999999887777666555557899999999999997543

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=99.73  E-value=1.5e-16  Score=129.66  Aligned_cols=116  Identities=28%  Similarity=0.321  Sum_probs=86.1

Q ss_pred             cceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEE
Q 018138          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (360)
Q Consensus       112 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V  191 (360)
                      +++|+||.|.|+|++++++||+++|||++..+..  +.   .+++.......++.+.+...       ...++.|++|.|
T Consensus         2 ~~~l~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~--~~---~~~~~~~~~~~~~~~~l~~~-------~~~~~~hiaf~v   69 (122)
T cd07265           2 VLRPGHVQLRVLDLEEAIKHYREVLGLDEVGRDD--QG---RVYLKAWDEFDHHSIVLREA-------DTAGLDFMGFKV   69 (122)
T ss_pred             cceEeEEEEEeCCHHHHHHHHHhccCCEeeeecC--Cc---eEEEEccCCCcccEEEeccC-------CCCCeeEEEEEe
Confidence            6799999999999999999999999999875431  11   24555432223345555321       124688999999


Q ss_pred             C---CHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecC
Q 018138          192 E---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (360)
Q Consensus       192 ~---Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~  239 (360)
                      +   |+++++++|+++|+++...|.....+....+||+|||||.||+++..
T Consensus        70 ~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~  120 (122)
T cd07265          70 LDDADLEKLEARLQAYGVAVERIPAGELPGVGRRVRFQLPSGHTMELYADK  120 (122)
T ss_pred             CCHHHHHHHHHHHHHCCCcEEEcccCCCCCCceEEEEECCCCCEEEEEEec
Confidence            7   79999999999999988765443333234699999999999998754

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=99.72  E-value=2.1e-16  Score=135.98  Aligned_cols=127  Identities=28%  Similarity=0.332  Sum_probs=90.1

Q ss_pred             cceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEe----eC--------------CCCCeEEEEEeeCCCCceEEEEEEecC
Q 018138          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKR----DI--------------PEDRYTNAFLGYGPEDSHFVVELTYNY  173 (360)
Q Consensus       112 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~----~~--------------~~~~~~~~~l~~g~~~~~~~lel~~~~  173 (360)
                      .++++||+|.|+|++++++||+++|||++..+.    ..              ....+..+++..++   +..|++++..
T Consensus         2 ~~~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~---~~~ieL~~~~   78 (162)
T TIGR03645         2 PRTFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGD---RIGVELFEFK   78 (162)
T ss_pred             CceEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCC---CCcEEEEecc
Confidence            368999999999999999999999999886321    00              01124566776543   3358887754


Q ss_pred             CCCCCc-----CCCcceEEEEEECCHHHHHHHHHHcCCeEecCC-eec-CC-CCEEEEEEECCCCCEEEEeecCCC
Q 018138          174 GVDKYD-----IGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREP-GPV-KG-GNTVIAFIEDPDGYKFELLERGPT  241 (360)
Q Consensus       174 ~~~~~~-----~g~g~~hi~f~V~Dld~~~~rL~~~G~~~~~~p-~~~-~~-g~~~~~~~~DPdG~~iEl~~~~~~  241 (360)
                      ......     .+.|+.|++|.|+|+++++++|+++|+++...+ ... +. .....+|++|||||.|||++....
T Consensus        79 ~~~~~~~~~~~~~~g~~Hla~~v~dida~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~~  154 (162)
T TIGR03645        79 NQENPEDNFEYWKTGVFHFCVQDPDVEGLAERIVAAGGKKRMPVPRYYYPGEKPYRMIYMEDPFGNILEIYSHSYE  154 (162)
T ss_pred             CCCCCCcccccccccceEEEEEcCCHHHHHHHHHHcCCcccCCCccccCCCCCceEEEEEECCCCCEEEEEEcChh
Confidence            322111     246899999999999999999999998764432 211 11 123579999999999999997653

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=99.72  E-value=2.8e-16  Score=131.05  Aligned_cols=120  Identities=21%  Similarity=0.249  Sum_probs=90.8

Q ss_pred             eEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCC------CcCCCcceEEE
Q 018138          115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK------YDIGTGFGHFG  188 (360)
Q Consensus       115 l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~------~~~g~g~~hi~  188 (360)
                      ++|+.|.|+|++++++||+++|||++..+...+  .....++..+    ...+.+........      ...+.+..|++
T Consensus         1 ~~Hi~i~V~D~e~s~~FY~~vLGf~~~~~~~~~--~~~~~~~~~g----~~~l~l~~~~~~~~~~~~~~~~~~~g~~hia   74 (136)
T cd08342           1 FDHVEFYVGNAKQLASWFSTKLGFEPVAYHGSE--DKASYLLRQG----DINFVLNSPLNSFAPVADFLEKHGDGVCDVA   74 (136)
T ss_pred             CeEEEEEeCCHHHHHHHHHHhcCCeEEEecCCC--ceEEEEEEcC----CEEEEEecCCCCCCchHHHHHhcCCceEEEE
Confidence            589999999999999999999999998654322  1223444322    23566654222111      12456889999


Q ss_pred             EEECCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCCC
Q 018138          189 IAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  241 (360)
Q Consensus       189 f~V~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~~  241 (360)
                      |.|+|+++++++|+++|+++..+|...+++ .+.++++||||+.|||++....
T Consensus        75 ~~V~Dvda~~~~l~~~G~~v~~~p~~~~~~-~~~~~i~dp~G~~ie~~~~~~~  126 (136)
T cd08342          75 FRVDDAAAAYERAVARGAKPVQEPVEEPGE-LKIAAIKGYGDSLHTLVDRKGY  126 (136)
T ss_pred             EEeCCHHHHHHHHHHcCCeEccCceecCCe-EEEEEEeccCCcEEEEEecCCC
Confidence            999999999999999999999988875555 4579999999999999997764

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.72  E-value=2.7e-16  Score=127.70  Aligned_cols=120  Identities=32%  Similarity=0.427  Sum_probs=85.8

Q ss_pred             ceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCC-CeEEEEEeeCCCCceEEEEEEecCCC---CCCcCCCcceEEE
Q 018138          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPED-RYTNAFLGYGPEDSHFVVELTYNYGV---DKYDIGTGFGHFG  188 (360)
Q Consensus       113 ~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~-~~~~~~l~~g~~~~~~~lel~~~~~~---~~~~~g~g~~hi~  188 (360)
                      .+++||+|.|+|++++++||+++|||++..+...++. .+. ..+... .  ...+++......   .....+.|++|++
T Consensus         2 ~~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~~~~~-~~~~~~-~--~~~i~l~~~~~~~~~~~~~~~~g~~h~~   77 (125)
T cd08352           2 FGIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPERGSYK-LDLLLN-G--GYQLELFSFPNPPERPSYPEACGLRHLA   77 (125)
T ss_pred             CccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCCCcEE-EEEecC-C--CcEEEEEEcCCCCCCCCCCcCCCceEEE
Confidence            5899999999999999999999999999765332221 222 222221 1  234555432211   1112345789999


Q ss_pred             EEECCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEee
Q 018138          189 IAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (360)
Q Consensus       189 f~V~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~  237 (360)
                      |.|+|+++++++|+++|+++..++....++. .++|++||+|+.|||+|
T Consensus        78 ~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~-~~~~~~DP~G~~iEl~~  125 (125)
T cd08352          78 FSVEDIEAAVKHLKAKGVEVEPIRVDEFTGK-RFTFFYDPDGLPLELYE  125 (125)
T ss_pred             EEeCCHHHHHHHHHHcCCccccccccCCCce-EEEEEECCCCCEEEecC
Confidence            9999999999999999999887664444443 46999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=99.71  E-value=4.1e-16  Score=130.51  Aligned_cols=118  Identities=23%  Similarity=0.410  Sum_probs=89.5

Q ss_pred             ccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEE
Q 018138          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  190 (360)
Q Consensus       111 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~  190 (360)
                      |+.+|+||.|.|+|++++++||+++|||++..+..      ..+++..+.    ..+.+......+....+.++.|++|.
T Consensus         1 ~i~~i~hi~L~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~g----~~l~l~~~~~~~~~~~~~~~~hiaf~   70 (139)
T PRK04101          1 MLKGINHICFSVSNLEKSIEFYEKVLGAKLLVKGR------KTAYFDLNG----LWIALNEEKDIPRNEIHQSYTHIAFS   70 (139)
T ss_pred             CCCcEEEEEEEecCHHHHHHHHHhccCCEEEeecC------eeEEEecCC----eEEEeeccCCCCCccCCCCeeEEEEE
Confidence            57889999999999999999999999999975421      235665432    34555433222222234467899999


Q ss_pred             EC--CHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecC
Q 018138          191 VE--DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (360)
Q Consensus       191 V~--Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~  239 (360)
                      ++  |+++++++++++|+++..+|....++. +.+||+|||||.|||.+..
T Consensus        71 v~~~dv~~~~~~l~~~G~~i~~~~~~~~~~~-~~~~~~DPdGn~iEl~~~~  120 (139)
T PRK04101         71 IEEEDFDHWYQRLKENDVNILPGRERDERDK-KSIYFTDPDGHKFEFHTGT  120 (139)
T ss_pred             ecHHHHHHHHHHHHHCCceEcCCccccCCCc-eEEEEECCCCCEEEEEeCC
Confidence            98  899999999999999887766665554 4699999999999998755

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.70  E-value=5.7e-16  Score=132.07  Aligned_cols=124  Identities=23%  Similarity=0.342  Sum_probs=94.5

Q ss_pred             ccccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCC---CCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcce
Q 018138          109 KSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIP---EDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFG  185 (360)
Q Consensus       109 ~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~---~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~  185 (360)
                      .+..++|+||+|.|+|++++++||+++|||++.......   +.....+|+..++.  ++.+.+....      .+.+++
T Consensus         4 ~~~~~~l~Hi~l~v~Dl~~a~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~i~~~~~~------~~~g~~   75 (154)
T cd07237           4 VTGDQGLGHVVLATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCNGR--HHSLALAEGP------GPKRIH   75 (154)
T ss_pred             ccCCCccCEEEEEeCCHHHHHHHHHHccCCEEEEEEcccCCCCCcceEEEEEeCCC--CCCEEEEcCC------CCceeE
Confidence            356789999999999999999999999999987653321   11345677776432  3345554321      135799


Q ss_pred             EEEEEECCH---HHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCC
Q 018138          186 HFGIAVEDV---AKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (360)
Q Consensus       186 hi~f~V~Dl---d~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~  240 (360)
                      |++|.|+|+   ++++++|+++|+++..++..++.++...+|++||+|+.|||.....
T Consensus        76 Hiaf~V~d~~~l~~~~~~L~~~G~~v~~~~~~~~~~~~~~~y~~DPdG~~iEl~~~~~  133 (154)
T cd07237          76 HLMLEVTSLDDVGRAYDRVRARGIPIAMTLGRHTNDRMLSFYVRTPSGFAIEYGWGGR  133 (154)
T ss_pred             EEEEEcCCHHHHHHHHHHHHHcCCceeccCCccCCCCcEEEEEECCCCcEEEeccCce
Confidence            999999874   5689999999999988877766555567999999999999987654

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.69  E-value=4.5e-16  Score=146.03  Aligned_cols=160  Identities=22%  Similarity=0.303  Sum_probs=110.4

Q ss_pred             cccchhHHHHhhCccccccccCCCCCCCccccccccccccccccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCC
Q 018138           69 FGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE  148 (360)
Q Consensus        69 ~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~  148 (360)
                      .+++...+.+|+|+.+|+.++...........+.....+ ...+.+|+||+|.|+|++++.+||+++|||++..+...+.
T Consensus        98 ~~~~~~~f~DPdGn~lEl~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~Hv~l~v~Dle~s~~FY~~~LGf~~~~~~~~~~  176 (286)
T TIGR03213        98 GVLGLIKFTDPGGNPLEIYYGAVEDFEKPFVSPRAVSGF-VTGDQGLGHIVLRVPDVDAALAFYTEVLGFQLSDVIDLPA  176 (286)
T ss_pred             cceEEEEEECCCCCEEEEEEcccccCCCCCCCCCCCCcc-ccCCccccEEEEEcCCHHHHHHHHHHccCCeEEEeEcccC
Confidence            445667889999999998765432211111111111112 3457899999999999999999999999999876532221


Q ss_pred             --C-CeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEECCHHH---HHHHHHHcCCeEecCCeecCCCCEEE
Q 018138          149 --D-RYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAK---TVDLVKAKGGKVTREPGPVKGGNTVI  222 (360)
Q Consensus       149 --~-~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~Dld~---~~~rL~~~G~~~~~~p~~~~~g~~~~  222 (360)
                        + .+..+|+.+++.  ++.+.+....      ...+++|++|+|+|+++   +.++|+++|+ ....|..+..++..+
T Consensus       177 ~~g~~~~~~~l~~~~~--~~~~~l~~~~------~~~~~~Hiaf~v~d~~~v~~~~~~l~~~G~-~~~~~~r~~~~~~~~  247 (286)
T TIGR03213       177 GPGVTVRPYFLHCNER--HHSLAFAAGP------SEKRLNHLMLEVDTLDDVGLALDRVDADGI-VASTLGRHTNDHMVS  247 (286)
T ss_pred             CCCCcceEEEEEECCC--cceEEEecCC------CCCceEEEEEEcCCHHHHHHHHHHHHHCCC-EEecCCcCCCCCeEE
Confidence              1 124577776543  3445554321      23479999999998666   7999999999 666666665555668


Q ss_pred             EEEECCCCCEEEEeec
Q 018138          223 AFIEDPDGYKFELLER  238 (360)
Q Consensus       223 ~~~~DPdG~~iEl~~~  238 (360)
                      +|++||+|+.||+...
T Consensus       248 ~y~~DP~G~~iE~~~~  263 (286)
T TIGR03213       248 FYVATPSGWLVEYGWG  263 (286)
T ss_pred             EEEECCCCcEEEeecC
Confidence            9999999999999873

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>PLN02300 lactoylglutathione lyase

Probab=99.69  E-value=5.5e-16  Score=145.53  Aligned_cols=147  Identities=47%  Similarity=0.796  Sum_probs=112.6

Q ss_pred             HHHHhhCccccccccCCCCCCCccccccccccccccccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEE
Q 018138           75 KLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNA  154 (360)
Q Consensus        75 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~  154 (360)
                      -+.+|+|+.+|+....                   ....++.|+.|.|+|++++.+||+++|||++..+...++..|..+
T Consensus       134 ~~~DPdG~~iEl~~~~-------------------~~~~~~~~~~l~~~d~~~a~~Fy~~~lg~~~~~~~~~~~~~~~~~  194 (286)
T PLN02300        134 FVKDPDGYKFELIQRG-------------------PTPEPLCQVMLRVGDLDRSIKFYEKAFGMKLLRKRDNPEYKYTIA  194 (286)
T ss_pred             EEECCCCCEEEEEeCC-------------------CCCCcceeEEEEeCCHHHHHHHHHhccCCEEEeeecccccceEEE
Confidence            3468889999984321                   123467788899999999999999999999986555455567777


Q ss_pred             EEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEECCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEE
Q 018138          155 FLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFE  234 (360)
Q Consensus       155 ~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iE  234 (360)
                      ++.+++......+++....+..++..+++.+|++|.|+|+++++++++++|+++..+|...++.+...++|+||||+.++
T Consensus       195 ~~~~~~~~~~~~lel~~~~~~~~~~~g~~~~~i~~~v~di~~~~~~~~~~G~~v~~~p~~~p~~~~~~~~~~DPdG~~i~  274 (286)
T PLN02300        195 MMGYGPEDKTTVLELTYNYGVTEYTKGNAYAQIAIGTDDVYKTAEAIKLVGGKITREPGPLPGINTKITACLDPDGWKTV  274 (286)
T ss_pred             EEecCCCCCccEEEEeecCCCCccccCCceeEEEEecCCHHHHHHHHHHcCCeEecCCccCCCCceEEEEEECCCCCEEE
Confidence            77654333334566655443333445678999999999999999999999999999888877644446889999999999


Q ss_pred             EeecCC
Q 018138          235 LLERGP  240 (360)
Q Consensus       235 l~~~~~  240 (360)
                      |++...
T Consensus       275 ~~~~~~  280 (286)
T PLN02300        275 FVDNID  280 (286)
T ss_pred             EEccch
Confidence            998753

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=99.69  E-value=4.7e-16  Score=127.26  Aligned_cols=119  Identities=32%  Similarity=0.541  Sum_probs=87.5

Q ss_pred             eeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCC----C--cCCCcceEE
Q 018138          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK----Y--DIGTGFGHF  187 (360)
Q Consensus       114 ~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~----~--~~g~g~~hi  187 (360)
                      +++|++|.|+|++++++||+++|||++......++.+...+++..++    ..+++.+......    +  ..+.++.|+
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~i~l~~~~~~~~~~~~~~~~~~~g~~~i   76 (128)
T TIGR03081         1 RIDHVGIAVPDLEEAAKLYEDVLGAHVSHIEEVPEQGVKVVFIALGN----TKVELLEPLGEDSPIAKFLEKNGGGIHHI   76 (128)
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHhCCCCccceeCCCCCcEEEEEecCC----EEEEEEecCCCCChHHHHHhcCCCceEEE
Confidence            57899999999999999999999999976543334345566666542    2566654321110    0  124578899


Q ss_pred             EEEECCHHHHHHHHHHcCCeEecC-CeecCCCCEEEEEE--ECCCCCEEEEee
Q 018138          188 GIAVEDVAKTVDLVKAKGGKVTRE-PGPVKGGNTVIAFI--EDPDGYKFELLE  237 (360)
Q Consensus       188 ~f~V~Dld~~~~rL~~~G~~~~~~-p~~~~~g~~~~~~~--~DPdG~~iEl~~  237 (360)
                      +|.|+|+++++++|+++|+++..+ |....+|. ..+|+  +||||+.||++|
T Consensus        77 ~~~v~di~~~~~~l~~~G~~~~~~~~~~~~~g~-~~~~~~~~dp~G~~~E~~~  128 (128)
T TIGR03081        77 AIEVDDIEAALETLKEKGVRLIDEEPRIGAGGK-PVAFLHPKSTGGVLIELEE  128 (128)
T ss_pred             EEEcCCHHHHHHHHHHCCCcccCCCCccCCCCC-EEEEecccccCcEEEEecC
Confidence            999999999999999999998764 55444553 35666  799999999975

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>cd07256 HPCD_C_class_II C-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD), which catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate; belongs to the type I class II family of extradiol dioxygenases

Probab=99.69  E-value=1.3e-15  Score=130.88  Aligned_cols=119  Identities=25%  Similarity=0.393  Sum_probs=85.4

Q ss_pred             cceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEE
Q 018138          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (360)
Q Consensus       112 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V  191 (360)
                      .++|+||+|.|+|++++++||+++|||++......+.......++..+..  ++.+.+...       .+.+++|++|.|
T Consensus         1 ~~~l~Hv~l~V~Dl~~s~~FY~~vLGl~~~~~~~~~~~~~~~~~l~~~~~--~~~i~l~~~-------~~~~~~Hiaf~v   71 (161)
T cd07256           1 PQRLDHFNLRVPDVDAGLAYYRDELGFRVSEYTEDDDGTTWAAWLHRKGG--VHDTALTGG-------NGPRLHHVAFWV   71 (161)
T ss_pred             CceEEEEEEecCCHHHHHHHHHhccCCEEEEEeccCCCcEEEEEEecCCC--cceEEEecC-------CCCceeEEEEEc
Confidence            36899999999999999999999999998755433233333456654322  334554432       234789999999


Q ss_pred             CC---HHHHHHHHHHcCCe--EecCCeecCCCCEEEEEEECCCCCEEEEeecC
Q 018138          192 ED---VAKTVDLVKAKGGK--VTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (360)
Q Consensus       192 ~D---ld~~~~rL~~~G~~--~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~  239 (360)
                      +|   +++++++|+++|+.  +..+|..+..++..++|++|||||.||+++..
T Consensus        72 ~~~~~v~~~~~~L~~~G~~~~~~~~p~~~g~~~~~~~y~~DPdG~~iEl~~~~  124 (161)
T cd07256          72 PEPHNIIRTCDLLAAAGYSDRIERGPGRHGISNAFFLYLRDPDGHRIEIYTGD  124 (161)
T ss_pred             CCHHHHHHHHHHHHHcCCCcccccCCCccCCCCceEEEEECCCCCeEEEeecC
Confidence            86   88889999999986  33445443333344699999999999999754

This subfamily contains the C-terminal, catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of

>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.69  E-value=9.3e-16  Score=124.89  Aligned_cols=115  Identities=21%  Similarity=0.291  Sum_probs=86.0

Q ss_pred             cccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEE
Q 018138          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGI  189 (360)
Q Consensus       110 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f  189 (360)
                      +.+.+|+|++|.|+|++++++||+++|||++..+.+      ..+|+...+...++.+.+...       ...++.|++|
T Consensus         2 ~~i~~i~hv~l~v~dl~~a~~FY~~~lG~~~~~~~~------~~~~l~~~~~~~~~~~~l~~~-------~~~~~~h~af   68 (121)
T cd09013           2 FDIAHLAHVELLTPKPEESLWFFTDVLGLEETGREG------QSVYLRAWGDYEHHSLKLTES-------PEAGLGHIAW   68 (121)
T ss_pred             CCccEeeEEEEEeCCHHHHHHHHHhCcCCEEEeecC------CeEEEEeccCCCccEEEEeeC-------CCCceEEEEE
Confidence            467899999999999999999999999999986532      135665543323455665432       1247899999


Q ss_pred             EEC---CHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecC
Q 018138          190 AVE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (360)
Q Consensus       190 ~V~---Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~  239 (360)
                      .|+   |+++++++++++|+++...+.....+  ..+||+|||||.+|++...
T Consensus        69 ~v~~~~~v~~~~~~l~~~G~~~~~~~~~~~~~--~~~~~~DPdG~~iEl~~~~  119 (121)
T cd09013          69 RASSPEALERRVAALEASGLGIGWIEGDPGHG--KAYRFRSPDGHPMELYWEV  119 (121)
T ss_pred             EcCCHHHHHHHHHHHHHcCCccccccCCCCCc--ceEEEECCCCCEEEEEEec
Confidence            997   58899999999999875433322223  3589999999999998754

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.68  E-value=8.3e-16  Score=145.34  Aligned_cols=158  Identities=17%  Similarity=0.238  Sum_probs=107.8

Q ss_pred             ccchhHHHHhhCccccccccCCCCCCCccccccccc----cccccccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEee
Q 018138           70 GAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVL----DWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRD  145 (360)
Q Consensus        70 g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~  145 (360)
                      +++...+.+++|+.+|+.+.......  .....+..    .+..+.+++|+||+|.|+|++++++||+++|||++..+..
T Consensus        99 ~g~~~~~~DPdG~~iEl~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~Hi~l~V~Dl~~s~~FY~~~LG~~~~~~~~  176 (303)
T TIGR03211        99 VGRRVRFTLPSGHTMELYAEKEYVGE--LVGGLNPDPWPDPLRGVGARRLDHCLLYGEDVAENTRFFTEVLGFRLTEQVV  176 (303)
T ss_pred             cceEEEEECCCCCEEEEEEccccccc--cccccCCcccccccCCcCceeEEEEeEEeCCHHHHHHHHHHhcCCEEEeeEE
Confidence            34567788999999999765543211  00111111    1223457899999999999999999999999999876544


Q ss_pred             CCCCCe-EEEEEeeCCCCceEEEEEEecCCCCCCcCCCc-ceEEEEEECC---HHHHHHHHHHcCCeEecCCeecCCCCE
Q 018138          146 IPEDRY-TNAFLGYGPEDSHFVVELTYNYGVDKYDIGTG-FGHFGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNT  220 (360)
Q Consensus       146 ~~~~~~-~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g-~~hi~f~V~D---ld~~~~rL~~~G~~~~~~p~~~~~g~~  220 (360)
                      .+.... ...|+..+..  ++.+.+...       .+.| ++|+||.|+|   +++++++|+++|+++..+|..+..+..
T Consensus       177 ~~~~~~~~~~~~~~~~~--~~~~~~~~~-------~~~g~~~Hiaf~v~~~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~  247 (303)
T TIGR03211       177 LGDGKEQAAAWLSVSNK--AHDIAFVGD-------PEPGKLHHVSFFLDSWEDVLKAADVMSKNDVSIDIGPTRHGITRG  247 (303)
T ss_pred             cCCCcEEEEEEEEcCCC--CcccceecC-------CCCCceEEEEEEcCCHHHHHHHHHHHHhCCCceeeCCcccCCCCc
Confidence            333322 3456654332  223333221       1234 8999999986   566788999999999888876654444


Q ss_pred             EEEEEECCCCCEEEEeec
Q 018138          221 VIAFIEDPDGYKFELLER  238 (360)
Q Consensus       221 ~~~~~~DPdG~~iEl~~~  238 (360)
                      .++||+||+||.||+...
T Consensus       248 ~~~y~~DPdG~~iEl~~~  265 (303)
T TIGR03211       248 QTIYFFDPSGNRNETFGG  265 (303)
T ss_pred             eEEEEECCCCCEEEEecC
Confidence            579999999999999843

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.67  E-value=8.7e-16  Score=144.52  Aligned_cols=158  Identities=23%  Similarity=0.297  Sum_probs=109.2

Q ss_pred             cccchhHHHHhhCccccccccCCCCCCCccccccccccccccccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCC
Q 018138           69 FGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE  148 (360)
Q Consensus        69 ~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~  148 (360)
                      .+++...+.+++|+.+|+..........    ......+....+++|+||+|.|+|++++++||+++|||++..+...+.
T Consensus        95 ~~~~~~~~~DPdG~~iEl~~~~~~~~~~----~~~~~~~~~~~~~~i~Hv~l~v~dl~~a~~Fy~~~lG~~~~~~~~~~~  170 (294)
T TIGR02295        95 GQPEALRVEDPFGYPIEFYFEMEKVERL----LRRYHRHRGVSPVRLDHFNVFVPDVQRALRFYKEELGFRVTEYTEDDE  170 (294)
T ss_pred             CCceEEEEECCCCCEEEEEEchhhcccc----cccccccCCccceeeeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCC
Confidence            4456677889999999997654322100    000000112357899999999999999999999999999976643333


Q ss_pred             CCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEECC---HHHHHHHHHHcCCe--EecCCeecCCCCEEEE
Q 018138          149 DRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVED---VAKTVDLVKAKGGK--VTREPGPVKGGNTVIA  223 (360)
Q Consensus       149 ~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~D---ld~~~~rL~~~G~~--~~~~p~~~~~g~~~~~  223 (360)
                      +.....|+..+.  .++.+.+...       .+.+++|+||+|+|   +++++++|+++|++  +..+|..+..+...++
T Consensus       171 ~~~~~~~~~~~~--~~~~~~~~~~-------~~~~~~Hiaf~v~d~~~v~~~~~~l~~~G~~~~~~~~p~~~~~~~~~~~  241 (294)
T TIGR02295       171 GNLAAAWLHRKG--GVHDIALTNG-------NGPRLHHIAYWVHDPLNIIKACDILASAGLSDSIERGPGRHGVSNAFFL  241 (294)
T ss_pred             CcEEEEEEecCC--CcCceEeecC-------CCCceeeEEEEcCCHHHHHHHHHHHHhCCCCcccccCCccCCCCcceEE
Confidence            333445654432  2334444321       23579999999998   55678999999998  6667766555555579


Q ss_pred             EEECCCCCEEEEeecC
Q 018138          224 FIEDPDGYKFELLERG  239 (360)
Q Consensus       224 ~~~DPdG~~iEl~~~~  239 (360)
                      |++||+|+.||++...
T Consensus       242 y~~DP~G~~iEl~~~~  257 (294)
T TIGR02295       242 YLRDPDGHRIELYTGD  257 (294)
T ss_pred             EEECCCCCEEEEEecc
Confidence            9999999999999754

The enzyme from Bacillus brevis contains manganese.

>cd09014 BphC-JF8_C_like C-terminal, catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.67  E-value=2.5e-15  Score=129.73  Aligned_cols=124  Identities=22%  Similarity=0.347  Sum_probs=91.4

Q ss_pred             cccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEE
Q 018138          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGI  189 (360)
Q Consensus       110 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f  189 (360)
                      +.+.+|+|++|.|+|++++++||+++|||++......+.......|+.....  ++.+.+.....    ....+++|++|
T Consensus         2 ~~i~~i~Hi~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~l~~~~~----~~~~~~~hiaf   75 (166)
T cd09014           2 VGVRRLDHVNLLASDVDANRDFMEEVLGFRLREQIRLDNGKEAGAWMSVSNK--VHDVAYTRDPA----GARGRLHHLAY   75 (166)
T ss_pred             CCcceeeeEEEEcCCHHHHHHHHHHccCCEEEEEEecCCCceEEEEEeCCCC--ceeEEEecCCC----CCCCCceEEEE
Confidence            4578999999999999999999999999998765433333334466665432  23444433211    11236899999


Q ss_pred             EECC---HHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecC
Q 018138          190 AVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (360)
Q Consensus       190 ~V~D---ld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~  239 (360)
                      .|+|   +++++++|+++|+++..+|.....+...++|+.||+|+.||++...
T Consensus        76 ~v~~~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~  128 (166)
T cd09014          76 ALDTREDVLRAADIFLENGIFIEAGPGKHGIQQTFFLYVYEPGGNRVELFGGG  128 (166)
T ss_pred             ECCCHHHHHHHHHHHHHcCCccccCCcccCCCCceEEEEECCCCCEEEEEEcC
Confidence            9985   5588999999999987777665554444689999999999999874

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C. Th

>cd07258 PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.67  E-value=1.6e-15  Score=127.45  Aligned_cols=113  Identities=21%  Similarity=0.278  Sum_probs=88.7

Q ss_pred             EEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEECC--
Q 018138          116 LHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVED--  193 (360)
Q Consensus       116 ~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~D--  193 (360)
                      .||.|.|+|++++++||+++|||++..+...     ..+|+.......++.+.+...       ...+++|++|.|+|  
T Consensus         1 ~Hv~l~V~Dle~s~~Fy~~vLG~~~~~~~~~-----~~~~l~~~~~~~~h~~~~~~~-------~~~gl~Hiaf~v~~~~   68 (141)
T cd07258           1 GHVVIGSENFEASRDSLVEDFGFRVSDLIED-----RIVFMRCHPNPFHHTFAVGPA-------SSSHFHHVNFMVTDID   68 (141)
T ss_pred             CcEEEecCCHHHHHHHHHhcCCCEeeeeeCC-----EEEEEEcCCCCCcceeeeccC-------CCCceEEEEEECCCHH
Confidence            4999999999999999999999998765321     357887654333455544321       23489999999986  


Q ss_pred             -HHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCC
Q 018138          194 -VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (360)
Q Consensus       194 -ld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~  240 (360)
                       +++++++|+++|+++..+|..+..+....+|++||+|+.||+.....
T Consensus        69 ~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~~  116 (141)
T cd07258          69 DIGKALYRIKAHDVKVVFGPGRHPPSDSIFFYFLDPDGITVEYSFGME  116 (141)
T ss_pred             HHHHHHHHHHHCCCcEEeCCceECCCCCEEEEEECCCCCEEEEEeCcc
Confidence             56779999999999988888777555567999999999999987664

This subfamily contains the C-terminal, catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as for other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=99.67  E-value=5.7e-16  Score=126.03  Aligned_cols=120  Identities=28%  Similarity=0.404  Sum_probs=86.9

Q ss_pred             eeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeC--CCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcC---CCcceEEE
Q 018138          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDI--PEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDI---GTGFGHFG  188 (360)
Q Consensus       114 ~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~--~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~---g~g~~hi~  188 (360)
                      ||+||+|.|+|++++++||+++|||++......  ........++..+..  ++.+.............   ..+..|++
T Consensus         1 ~l~Hi~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~i~   78 (128)
T PF00903_consen    1 GLDHIAIRVKDLEKAIDFYTDVLGFRLVEESDNDGEGGDLRIAFLRIGEG--HIELFLNPSPPPRASGHSFPEHGGHHIA   78 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTTSEEEEEEEEESTTEEEEEEEEESTSS--CEEEEEEESSSSSSEEEHHHSHTSEEEE
T ss_pred             CeEEEEEEcCCHHHHHHHHHHHhCCcEEeeeccccccccccceeeccccc--ceeeeeeccccccccccccccccceeEE
Confidence            689999999999999999999999999987662  222334455554433  34444443322221111   01346777


Q ss_pred             EEEC---CHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEE
Q 018138          189 IAVE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL  235 (360)
Q Consensus       189 f~V~---Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl  235 (360)
                      +.+.   |+++++++|++.|+++..+|.....+....+|++||+|+.|||
T Consensus        79 ~~~~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~y~~Dp~G~~iE~  128 (128)
T PF00903_consen   79 FLAFDVDDLDAAYERLKAQGVEIVEEPDRYYFGSGYSFYFRDPDGNLIEF  128 (128)
T ss_dssp             EEESSHHHHHHHHHHHHHTTGEEEEEEEEHSTTCEEEEEEEETTSEEEEE
T ss_pred             EEeccHHHHHHHHHHHhhcCccEEecCCCCCCCCEEEEEEECCCCCEEEC
Confidence            7665   6888999999999999999888887777667899999999997

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>cd07266 HPCD_N_class_II N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

Probab=99.66  E-value=1.8e-15  Score=122.99  Aligned_cols=115  Identities=27%  Similarity=0.359  Sum_probs=85.4

Q ss_pred             ccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEE
Q 018138          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  190 (360)
Q Consensus       111 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~  190 (360)
                      +++++.|+.|.|+|++++++||+++|||++..+.+      ..+++.......++.+.+...       ...+..|++|.
T Consensus         1 ~~~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~-------~~~~~~hi~~~   67 (121)
T cd07266           1 NILRLGHVELRVTDLEKSREFYVDVLGLVETEEDD------DRIYLRGLEEFIHHSLVLTKA-------PVAGLGHIAFR   67 (121)
T ss_pred             CcceeeEEEEEcCCHHHHHHHHHhccCCEEeccCC------CeEEEEecCCCceEEEEEeeC-------CCCceeEEEEE
Confidence            36799999999999999999999999999975421      135555322223344555432       12468899999


Q ss_pred             EC---CHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeec
Q 018138          191 VE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (360)
Q Consensus       191 V~---Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~  238 (360)
                      |.   |+++++++++++|+++...|.....+....+|+.||||+.||++..
T Consensus        68 v~~~~dv~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~  118 (121)
T cd07266          68 VRSEEDLDKAEAFFQELGLPTEWVEAGEEPGQGRALRVEDPLGFPIEFYAE  118 (121)
T ss_pred             CCCHHHHHHHHHHHHHcCCCcccccCCcCCCCccEEEEECCCCCEEEEEec
Confidence            94   7999999999999998776444444433469999999999999865

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a differ

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.65  E-value=4.3e-15  Score=120.98  Aligned_cols=113  Identities=18%  Similarity=0.256  Sum_probs=84.9

Q ss_pred             ceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEEC
Q 018138          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVE  192 (360)
Q Consensus       113 ~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~  192 (360)
                      .+|.||+|.|+|++++++||+++|||++..+..  .   ..+++..++  .++.+.+....       ..++.|++|.++
T Consensus         1 ~~l~~v~l~v~Dl~~s~~FY~~~LG~~~~~~~~--~---~~~~~~~~~--~~~~~~l~~~~-------~~~~~~~~f~v~   66 (120)
T cd07252           1 KSLGYLGVESSDLDAWRRFATDVLGLQVGDRPE--D---GALYLRMDD--RAWRIAVHPGE-------ADDLAYAGWEVA   66 (120)
T ss_pred             CcccEEEEEeCCHHHHHHHHHhccCceeccCCC--C---CeEEEEccC--CceEEEEEeCC-------CCceeEEEEEEC
Confidence            378999999999999999999999999865421  1   236666543  24566665432       236789999997


Q ss_pred             ---CHHHHHHHHHHcCCeEecCCeec--CCCCEEEEEEECCCCCEEEEeecC
Q 018138          193 ---DVAKTVDLVKAKGGKVTREPGPV--KGGNTVIAFIEDPDGYKFELLERG  239 (360)
Q Consensus       193 ---Dld~~~~rL~~~G~~~~~~p~~~--~~g~~~~~~~~DPdG~~iEl~~~~  239 (360)
                         |+++++++|+++|+++...|...  ..+...++||+|||||.||++...
T Consensus        67 ~~~dl~~~~~~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~  118 (120)
T cd07252          67 DEAALDALAARLRAAGVAVEEGSAELAAERGVEGLIRFADPDGNRHELFWGP  118 (120)
T ss_pred             CHHHHHHHHHHHHHcCCeEEEcCHHHHhhCCCcEEEEEECCCCCEEEEEecc
Confidence               49999999999999998765322  223334799999999999998754

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.65  E-value=6e-15  Score=119.71  Aligned_cols=118  Identities=29%  Similarity=0.455  Sum_probs=86.1

Q ss_pred             cceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCC---CCCcCCCcceEEE
Q 018138          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV---DKYDIGTGFGHFG  188 (360)
Q Consensus       112 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~---~~~~~g~g~~hi~  188 (360)
                      +++|+|+.|.|+|++++++||+++|||++..+.+..  .  ...+..++    ..+++......   .....+.+..|++
T Consensus         1 ~~~l~hi~l~v~d~~~s~~Fy~~~lG~~~~~~~~~~--~--~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~hi~   72 (125)
T cd07253           1 IKRIDHVVLTVADIEATLDFYTRVLGMEVVRFGEEV--G--RKALRFGS----QKINLHPVGGEFEPAAGSPGPGSDDLC   72 (125)
T ss_pred             CcccceEEEEecCHHHHHHHHHHHhCceeecccccC--C--ceEEEeCC----EEEEEecCCCccCcCccCCCCCCceEE
Confidence            468999999999999999999999999997653211  1  23444442    24555543221   1122446789999


Q ss_pred             EEECC-HHHHHHHHHHcCCeEecCCeecCC--CCEEEEEEECCCCCEEEEee
Q 018138          189 IAVED-VAKTVDLVKAKGGKVTREPGPVKG--GNTVIAFIEDPDGYKFELLE  237 (360)
Q Consensus       189 f~V~D-ld~~~~rL~~~G~~~~~~p~~~~~--g~~~~~~~~DPdG~~iEl~~  237 (360)
                      |.+++ +++++++|+++|+++..+|....+  +....+||+||||+.+|+.+
T Consensus        73 ~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~  124 (125)
T cd07253          73 LITEPPIDELVAHLEAHGVPIEEGPVPRTGARGPITSVYFRDPDGNLIELSN  124 (125)
T ss_pred             EEecccHHHHHHHHHHCCceeecCcccccCCCCCccEEEEECCCCCEEEeee
Confidence            99975 999999999999998877754322  22346899999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=99.65  E-value=5.9e-15  Score=122.24  Aligned_cols=120  Identities=18%  Similarity=0.223  Sum_probs=83.5

Q ss_pred             ccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCC-eEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEE
Q 018138          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDR-YTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGI  189 (360)
Q Consensus       111 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~-~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f  189 (360)
                      |+.+|+||+|.|+|++++++||+++|||++..+....... ....++..+.    ..+++......    ...+++|++|
T Consensus         1 mi~~i~hv~l~V~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~----~~i~l~~~~~~----~~~~~~Hiaf   72 (131)
T cd08364           1 MIEGLSHITLIVKDLNKTTAFLQNIFNAREVYSSGDKTFSLSKEKFFLIGG----LWIAIMEGDSL----QERTYNHIAF   72 (131)
T ss_pred             CcccEeEEEEEeCCHHHHHHHHHHHhCCeeEEecccccccccceeEEEcCC----eEEEEecCCCC----CCCCceEEEE
Confidence            5779999999999999999999999999886543211000 0011222221    24566532211    1236899999


Q ss_pred             EEC--CHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecC
Q 018138          190 AVE--DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (360)
Q Consensus       190 ~V~--Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~  239 (360)
                      .|+  |+++++++|+++|+++..+. ....+..+.+||+|||||.+||....
T Consensus        73 ~v~~~~ld~~~~~l~~~gv~~~~~~-~~~~~~g~~~yf~DPdG~~iEl~~~~  123 (131)
T cd08364          73 KISDSDVDEYTERIKALGVEMKPPR-PRVQGEGRSIYFYDFDNHLFELHTGT  123 (131)
T ss_pred             EcCHHHHHHHHHHHHHCCCEEecCC-ccccCCceEEEEECCCCCEEEEecCC
Confidence            998  79999999999999876433 22333334799999999999998654

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.65  E-value=5.5e-15  Score=126.45  Aligned_cols=118  Identities=20%  Similarity=0.214  Sum_probs=85.9

Q ss_pred             eeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCC-CcCCCcceEEEEEEC
Q 018138          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK-YDIGTGFGHFGIAVE  192 (360)
Q Consensus       114 ~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~-~~~g~g~~hi~f~V~  192 (360)
                      +|+||+|.|+|++++++||+++|||++..+..   .  ...++..+. ..++.|++........ .....++.|++|.|+
T Consensus         1 gl~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~---~--~~~~~~~~~-~~~~~l~l~~~~~~~~~~~~~~~l~Hiaf~v~   74 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLTDVLGFREVGEEG---D--RVRLEEGGG-GPGAVVDVLEEPDQPRGRPGAGTVHHVAFRVP   74 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHHHhcCCEEEeeeC---C--EEEEEecCC-CCCCEEEEEeCCCCCCCcccCCceEEEEEECC
Confidence            58999999999999999999999999976532   1  223333321 2345778776432211 122347899999999


Q ss_pred             C---HHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCC
Q 018138          193 D---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (360)
Q Consensus       193 D---ld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~  240 (360)
                      |   +++++++|+++|+.+.. +...  +..+.+||+||+|+.||++...+
T Consensus        75 d~~dvd~~~~~L~~~Gv~~~~-~~~~--~~~~s~yf~DPdG~~iEl~~~~~  122 (157)
T cd08347          75 DDEELEAWKERLEALGLPVSG-IVDR--FYFKSLYFREPGGILFEIATDGP  122 (157)
T ss_pred             CHHHHHHHHHHHHHCCCCccc-cccc--ccEEEEEEECCCCcEEEEEECCC
Confidence            8   99999999999998643 3322  33457999999999999998764

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=99.65  E-value=5.8e-15  Score=118.58  Aligned_cols=114  Identities=24%  Similarity=0.233  Sum_probs=84.5

Q ss_pred             eEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEECCH
Q 018138          115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDV  194 (360)
Q Consensus       115 l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~Dl  194 (360)
                      +.||.|.|+|++++++||+++||+++..... +..  ..+++..++.   ..+.+.......  .......|++|.|+|+
T Consensus         1 ~~hi~l~v~d~~~s~~FY~~~lG~~~~~~~~-~~~--~~~~~~~~~~---~~~~~~~~~~~~--~~~~~~~~~~f~v~di   72 (114)
T cd07247           1 PVWFELPTTDPERAKAFYGAVFGWTFEDMGD-GGG--DYAVFSTGGG---AVGGLMKAPEPA--AGSPPGWLVYFAVDDV   72 (114)
T ss_pred             CEEEEeeCCCHHHHHHHHHhccCceeeeccC-CCC--ceEEEEeCCc---cEEEEecCCCCC--CCCCCeEEEEEEeCCH
Confidence            4799999999999999999999999975442 112  2345554431   233444322211  1233567999999999


Q ss_pred             HHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEee
Q 018138          195 AKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (360)
Q Consensus       195 d~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~  237 (360)
                      ++++++|+++|+++..+|...++++ ..++++|||||.|+|++
T Consensus        73 ~~~~~~l~~~g~~~~~~~~~~~~~~-~~~~~~DPdG~~~~l~~  114 (114)
T cd07247          73 DAAAARVEAAGGKVLVPPTDIPGVG-RFAVFADPEGAVFGLWQ  114 (114)
T ss_pred             HHHHHHHHHCCCEEEeCCcccCCcE-EEEEEECCCCCEEEeEC
Confidence            9999999999999998887766454 47999999999999975

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.65  E-value=4.1e-15  Score=121.99  Aligned_cols=113  Identities=16%  Similarity=0.232  Sum_probs=85.4

Q ss_pred             ccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEE
Q 018138          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  190 (360)
Q Consensus       111 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~  190 (360)
                      ++.+|.||.|.|+|++++.+||+++|||++..+..      ...|+..+..  ++.+.+....        .+..|++|+
T Consensus         3 ~~~~l~~v~l~v~d~~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~--~~~i~l~~~~--------~~~~~iaf~   66 (124)
T cd08361           3 ELQDIAYVRLGTRDLAGATRFATDILGLQVAERTA------KATYFRSDAR--DHTLVYIEGD--------PAEQASGFE   66 (124)
T ss_pred             eEEEeeEEEEeeCCHHHHHHHHHhccCceeccCCC------CeEEEEcCCc--cEEEEEEeCC--------CceEEEEEE
Confidence            46899999999999999999999999999864421      1467766432  3455554321        246799999


Q ss_pred             ECC---HHHHHHHHHHcCCeEecCCeecC--CCCEEEEEEECCCCCEEEEeecC
Q 018138          191 VED---VAKTVDLVKAKGGKVTREPGPVK--GGNTVIAFIEDPDGYKFELLERG  239 (360)
Q Consensus       191 V~D---ld~~~~rL~~~G~~~~~~p~~~~--~g~~~~~~~~DPdG~~iEl~~~~  239 (360)
                      |+|   +++++++++++|+++...+....  .+...++||+|||||.||++...
T Consensus        67 v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~f~DPdG~~iE~~~~~  120 (124)
T cd08361          67 LRDDDALESAATELEQYGHEVRRGTAEECELRKVKAFIAFRDPSGNSIELVVRP  120 (124)
T ss_pred             ECCHHHHHHHHHHHHHcCCceEEcCHHHhhcCCcceEEEEECcCCCEEEEEEee
Confidence            975   99999999999999876554221  23334689999999999998755

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.64  E-value=1.1e-14  Score=118.78  Aligned_cols=118  Identities=25%  Similarity=0.423  Sum_probs=87.6

Q ss_pred             ceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCC-CCCcCCCcceEEEEEE
Q 018138          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV-DKYDIGTGFGHFGIAV  191 (360)
Q Consensus       113 ~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~-~~~~~g~g~~hi~f~V  191 (360)
                      ++|+||+|.|+|++++++||+++|||++..+.+      ..+++..++  ....+.+...... .......+..|++|.|
T Consensus         1 ~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~------~~~~l~~~~--~~~~l~l~~~~~~~~~~~~~~~~~hi~f~v   72 (125)
T cd07255           1 TRIGAVTLRVADLERSLAFYQDVLGLEVLERTD------STAVLGTGG--KRPLLVLEEDPDAPPAPPGATGLYHFAILL   72 (125)
T ss_pred             CEEEEEEEEECCHHHHHHHHHhccCcEEEEcCC------CEEEEecCC--CeEEEEEEeCCCCCcccCCCCcEEEEEEEC
Confidence            589999999999999999999999999986521      135665543  2456666654332 1122345789999999


Q ss_pred             C---CHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCCC
Q 018138          192 E---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  241 (360)
Q Consensus       192 ~---Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~~  241 (360)
                      +   ++++++++|+++|+++..+ .....  ...+|+.|||||.+|+....+.
T Consensus        73 ~~~~~v~~~~~~l~~~g~~~~~~-~~~~~--~~~~~~~DPdG~~iEi~~~~~~  122 (125)
T cd07255          73 PSRADLAAALRRLIELGIPLVGA-SDHLV--SEALYLSDPEGNGIEIYADRPR  122 (125)
T ss_pred             CCHHHHHHHHHHHHHcCCceecc-ccccc--eeEEEEECCCCCEEEEEEecCc
Confidence            7   4999999999999987543 22222  3468999999999999987653

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.64  E-value=6e-15  Score=120.01  Aligned_cols=120  Identities=23%  Similarity=0.326  Sum_probs=84.2

Q ss_pred             eeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCC-CeEEEEEeeCCCCceEEEEEEecCCCCC--CcCCCcceEEEEE
Q 018138          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPED-RYTNAFLGYGPEDSHFVVELTYNYGVDK--YDIGTGFGHFGIA  190 (360)
Q Consensus       114 ~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~-~~~~~~l~~g~~~~~~~lel~~~~~~~~--~~~g~g~~hi~f~  190 (360)
                      +|+||+|.|.|++++++||+++|||++..+....+. .....++.......+..+++........  .....++.|++|.
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~hi~f~   80 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWPDAGPKGRRGPGQIHHIAFS   80 (126)
T ss_pred             CcccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEecCCCCCCCCCCCCcEEEEEEE
Confidence            578999999999999999999999998876543221 1122334332112234677765433221  1223467899999


Q ss_pred             EC---CHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEe
Q 018138          191 VE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  236 (360)
Q Consensus       191 V~---Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~  236 (360)
                      |+   |+++++++++++|+++...+..  .+ ...+||+||+|+.|||+
T Consensus        81 v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~-~~~~~~~DP~G~~iE~~  126 (126)
T cd08346          81 VPSEASLDAWRERLRAAGVPVSGVVDH--FG-ERSIYFEDPDGLRLELT  126 (126)
T ss_pred             cCCHHHHHHHHHHHHHcCCcccceEee--cc-eEEEEEECCCCCEEEeC
Confidence            98   4799999999999998764432  33 34689999999999985

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd08343 ED_TypeI_classII_C C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

Probab=99.64  E-value=8.1e-15  Score=121.23  Aligned_cols=116  Identities=30%  Similarity=0.448  Sum_probs=89.0

Q ss_pred             EEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEECCH-
Q 018138          116 LHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDV-  194 (360)
Q Consensus       116 ~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~Dl-  194 (360)
                      +||.|.|+|++++++||+++||+++..+...+ .....+|+..++.  ++.+.+.....      ..++.|++|.|+|+ 
T Consensus         1 ~Hv~l~V~dl~~a~~Fy~~~lG~~~~~~~~~~-~~~~~~~~~~~~~--~~~l~~~~~~~------~~~~~hl~~~v~d~~   71 (131)
T cd08343           1 DHVVLRTPDVAATAAFYTEVLGFRVSDRVGDP-GVDAAAFLRCDED--HHDLALFPGPE------RPGLHHVAFEVESLD   71 (131)
T ss_pred             CcEEEEcCCHHHHHHHHHhcCCCEEEEEEccC-CceeEEEEEcCCC--cceEEEEcCCC------CCCeeEEEEEcCCHH
Confidence            59999999999999999999999997664433 3335677776532  34566554321      34789999999986 


Q ss_pred             --HHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCC
Q 018138          195 --AKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (360)
Q Consensus       195 --d~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~  240 (360)
                        ++++++++++|+++..+|...+.+...+++|+||+|+.|||++..+
T Consensus        72 ~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~DPdG~~iei~~~~~  119 (131)
T cd08343          72 DILRAADRLAANGIQIEFGPGRHGPGNNLFLYFRDPDGNRVELSAEMY  119 (131)
T ss_pred             HHHHHHHHHHHcCCeeEECCCccCCCCcEEEEEECCCCCEEEEEcCCc
Confidence              4789999999999988776655444457899999999999998765

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=99.64  E-value=4.3e-15  Score=123.09  Aligned_cols=114  Identities=22%  Similarity=0.373  Sum_probs=83.0

Q ss_pred             eEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEEC--
Q 018138          115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVE--  192 (360)
Q Consensus       115 l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~--  192 (360)
                      |+||.|.|+|++++++||+++|||++..+..    .  .+++..+.    ..+.+...+..+......++.|++|.++  
T Consensus         1 i~HV~l~V~Dl~~a~~FY~~~LG~~~~~~~~----~--~~~~~~~~----~~l~l~~~~~~~~~~~~~~~~hiaf~v~~~   70 (131)
T cd08363           1 INHMTFSVSNLDKSISFYKHVFMEKLLVLGE----K--TAYFTIGG----TWLALNEEPDIPRNEIRQSYTHIAFTIEDS   70 (131)
T ss_pred             CceEEEEECCHHHHHHHHHHhhCCEEeccCC----c--cceEeeCc----eEEEEEccCCCCcCCcCccceEEEEEecHH
Confidence            6899999999999999999999999874321    1  24555432    3455544332221122347889999997  


Q ss_pred             CHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecC
Q 018138          193 DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (360)
Q Consensus       193 Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~  239 (360)
                      |+++++++|+++|+++..++....++++ .+||.|||||.||+.+..
T Consensus        71 dld~~~~~l~~~G~~~~~~~~~~~~~~~-~~~f~DPdG~~iEl~~~~  116 (131)
T cd08363          71 EFDAFYTRLKEAGVNILPGRKRDVRDRK-SIYFTDPDGHKLEVHTGT  116 (131)
T ss_pred             HHHHHHHHHHHcCCcccCCCccccCcce-EEEEECCCCCEEEEecCc
Confidence            4999999999999998765554444444 699999999999998754

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.64  E-value=7.9e-15  Score=117.82  Aligned_cols=117  Identities=25%  Similarity=0.308  Sum_probs=84.4

Q ss_pred             EEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCC--CCcCCCcceEEEEEECCH
Q 018138          117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD--KYDIGTGFGHFGIAVEDV  194 (360)
Q Consensus       117 HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~--~~~~g~g~~hi~f~V~Dl  194 (360)
                      ||+|.|.|++++.+||+++|||++..+..... ....+++..... ....+.+.......  ......+..|++|.|+|+
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~di   78 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPMGG-GFRWVTVAPPGS-PETSLVLAPPANPAAMSGLQPGGTPGLVLATDDI   78 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeeccCC-CcEEEEEeCCCC-CeeEEEEeCCCCccccccccCCCceEEEEEehHH
Confidence            89999999999999999999999987643222 222333332211 13456665433221  112345788999999999


Q ss_pred             HHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEee
Q 018138          195 AKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (360)
Q Consensus       195 d~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~  237 (360)
                      ++++++|+++|+++..+|....++  ..+|++||+|+.|||++
T Consensus        79 ~~~~~~l~~~g~~~~~~~~~~~~~--~~~~~~DP~G~~ie~~~  119 (119)
T cd07263          79 DATYEELKARGVEFSEEPREMPYG--TVAVFRDPDGNLFVLVQ  119 (119)
T ss_pred             HHHHHHHHhCCCEEeeccccCCCc--eEEEEECCCCCEEEEeC
Confidence            999999999999999887544433  46999999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=99.63  E-value=8.4e-15  Score=123.48  Aligned_cols=114  Identities=24%  Similarity=0.432  Sum_probs=87.1

Q ss_pred             ceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEEC
Q 018138          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVE  192 (360)
Q Consensus       113 ~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~  192 (360)
                      .+|+||.|.|+|++++++||+++|||++..+..   .  ...|+..+..  ++.+.+...       ...++.|++|.|+
T Consensus         3 ~~l~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~---~--~~~~l~~~~~--~~~~~l~~~-------~~~~~~hiaf~v~   68 (144)
T cd07239           3 VKISHVVLNSPDVDKTVAFYEDVLGFRVSDWLG---D--QMAFLRCNSD--HHSIAIARG-------PHPSLNHVAFEMP   68 (144)
T ss_pred             ceeeEEEEECCCHHHHHHHHHhcCCCEEEEeeC---C--eEEEEECCCC--cceEEEccC-------CCCceEEEEEECC
Confidence            489999999999999999999999999875422   1  2467776543  334555432       1246889999999


Q ss_pred             CHHHHH---HHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCC
Q 018138          193 DVAKTV---DLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (360)
Q Consensus       193 Dld~~~---~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~  240 (360)
                      |++++.   ++|+++|+++...+.....+...++||+||+|+.|||++...
T Consensus        69 d~~~l~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~yf~DPdG~~iE~~~~~~  119 (144)
T cd07239          69 SIDEVMRGIGRMIDKGIDILWGPGRHGPGDNTFAYFLDPGGFVIEYTSELE  119 (144)
T ss_pred             CHHHHHHHHHHHHHcCCceeeCCcccCCCCCEEEEEECCCCcEEEeccCce
Confidence            877764   899999999887765544444456899999999999998754

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.63  E-value=4.7e-15  Score=117.80  Aligned_cols=113  Identities=28%  Similarity=0.359  Sum_probs=83.8

Q ss_pred             eEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCC-CcCCCcceEEEEEECC
Q 018138          115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK-YDIGTGFGHFGIAVED  193 (360)
Q Consensus       115 l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~-~~~g~g~~hi~f~V~D  193 (360)
                      |+|++|.|+|++++++||+++|||++..+...+   ...+++..++.   ..+++........ ...+.+..|++|+|+|
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~---~~~~~~~~~~~---~~i~l~~~~~~~~~~~~~~~~~~~~~~v~d   74 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFL---FPGAWLYAGDG---PQLHLIEEDPPDALPEGPGRDDHIAFRVDD   74 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCCC---CCceEEEeCCC---cEEEEEecCCCccccCCCcccceEEEEeCC
Confidence            689999999999999999999999987543322   12356665443   2456654433221 1223467899999999


Q ss_pred             HHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEE
Q 018138          194 VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL  235 (360)
Q Consensus       194 ld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl  235 (360)
                      +++++++++++|+++..++.. .++.+ .+++.||+|+.+||
T Consensus        75 ~~~~~~~l~~~g~~~~~~~~~-~~~~~-~~~~~DP~G~~iE~  114 (114)
T cd07245          75 LDAFRARLKAAGVPYTESDVP-GDGVR-QLFVRDPDGNRIEL  114 (114)
T ss_pred             HHHHHHHHHHcCCCcccccCC-CCCcc-EEEEECCCCCEEeC
Confidence            999999999999998887654 33433 58999999999996

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=99.63  E-value=7.2e-15  Score=119.97  Aligned_cols=119  Identities=31%  Similarity=0.532  Sum_probs=88.4

Q ss_pred             eEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCC-CCCeEEEEEeeCCCCceEEEEEEecCCCC-C-----CcCCCcceEE
Q 018138          115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIP-EDRYTNAFLGYGPEDSHFVVELTYNYGVD-K-----YDIGTGFGHF  187 (360)
Q Consensus       115 l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~-~~~~~~~~l~~g~~~~~~~lel~~~~~~~-~-----~~~g~g~~hi  187 (360)
                      |+||.|.|+|++++.+||+++|||++....... +.....+++..+    ...+++..+.... .     ...+.+..|+
T Consensus         1 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~~g~~h~   76 (128)
T cd07249           1 IDHIGIAVPDLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLGLG----NVQIELIEPLDDDSPIAKFLEKRGEGLHHI   76 (128)
T ss_pred             CcEEEEEeCCHHHHHHHHHHhhCCCCccccccCcccccEEEEEEcC----CEEEEEEEECCCCCcHHHHHhcCCCceEEE
Confidence            579999999999999999999999997654432 233456677643    3467776543211 1     1245789999


Q ss_pred             EEEECCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCC--CCEEEEee
Q 018138          188 GIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPD--GYKFELLE  237 (360)
Q Consensus       188 ~f~V~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPd--G~~iEl~~  237 (360)
                      +|.|+|+++++++++++|+++..+|.....+++.++++.+|+  |+.|||++
T Consensus        77 ~f~v~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~d~~~~~g~~iE~~~  128 (128)
T cd07249          77 AFEVDDIDAALARLKAQGVRLLQEGPRIGAGGKRVAFLHPKDTGGVLIELVE  128 (128)
T ss_pred             EEEeCCHHHHHHHHHHCCCeeeccCCCccCCCCEEEEEecCCCceEEEEecC
Confidence            999999999999999999999888764455555555555555  99999975

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=99.63  E-value=5.2e-14  Score=135.79  Aligned_cols=230  Identities=23%  Similarity=0.310  Sum_probs=155.4

Q ss_pred             eEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCC--CCeEEEEEeeCCCCceEEEEEEecCCC-----------------
Q 018138          115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE--DRYTNAFLGYGPEDSHFVVELTYNYGV-----------------  175 (360)
Q Consensus       115 l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~--~~~~~~~l~~g~~~~~~~lel~~~~~~-----------------  175 (360)
                      ++||.+.|.|.+++..||+..|||+.+.+.....  .......++-|    ...+.+..+...                 
T Consensus         1 ~dhvef~v~da~~~~~~f~~~~GF~~~a~~~~~tg~~~~~s~~~r~g----~i~fv~~~~~~~~~~~~~~~~~~~~~~~~   76 (398)
T PLN02875          1 FHHVEFWCGDATNTARRFSWGLGMPLVAKSDLTTGNTTYASYLLRSG----DLVFLFTAPYSPKIGAGDDDPASTAPHPS   76 (398)
T ss_pred             CeEEEEEcCCHHHHHHHHHHhcCCCeEeecCCCCCCcceEEEEEEeC----CEEEEEeCCCCCccccccccccccccccc
Confidence            5899999999999999999999999987654211  11222333322    223333332111                 


Q ss_pred             --CC------CcCCCcceEEEEEECCHHHHHHHHHHcCCeEecCCeecCC----CCEEEEEEECCCCCEEEEeecCC---
Q 018138          176 --DK------YDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKG----GNTVIAFIEDPDGYKFELLERGP---  240 (360)
Q Consensus       176 --~~------~~~g~g~~hi~f~V~Dld~~~~rL~~~G~~~~~~p~~~~~----g~~~~~~~~DPdG~~iEl~~~~~---  240 (360)
                        ..      ..+|.++.-++|+|+|++++++++.++|++...+|....+    |...+.-+..++|..+.|+++..   
T Consensus        77 ~~~~~a~~~~~~HG~gV~dvaf~V~Da~~a~~~A~~~Ga~~~~~~~~~~d~~~~g~~~~~~I~~~G~~~h~lVdr~~~~~  156 (398)
T PLN02875         77 FSSDAARRFFAKHGLAVRAVGVLVEDAEEAFRTSVAHGARPVLEPTELGDEASGGKAVIAEVELYGDVVLRYVSYKGFDG  156 (398)
T ss_pred             cCcHHHHHHHHHcCCeeeEEEEEECCHHHHHHHHHHCCCeeccCCccccccccCceEEEEEEEccCCcEEEEEccCCCCC
Confidence              00      1256889999999999999999999999998887766533    23345567778888888886421   


Q ss_pred             ------------C--------CCCceeceeeecCHHHHHHHhhhcceEEeeeccC----C--Cc----------------
Q 018138          241 ------------T--------PEPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPE----D--KN----------------  278 (360)
Q Consensus       241 ------------~--------~~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~----~--~~----------------  278 (360)
                                  .        -.+|+||++.|.+++++..||++    +|||...    .  ..                
T Consensus       157 ~~f~p~f~~~~~~~~~~~~~gl~~IDHi~iaV~~ld~a~~fY~~----vlGf~~~~~~d~~~i~~~~sgl~S~vl~sp~g  232 (398)
T PLN02875        157 AKFLPGYEPVESSSSFPLDYGLRRLDHAVGNVPNLLPAVNYIAG----FTGFHEFAEFTAEDVGTVDSGLNSMVLASNNE  232 (398)
T ss_pred             CccCCCcccccccccCCCCCCcceeCcceechhhHHHHHHHHHH----hcCCeeeeeeccccccccccceEEEEEEcCCC
Confidence                        0        12699999999999999999999    9998532    1  00                


Q ss_pred             -cEEEEEEeC-C--c-c------cccCCCCeeEEEEEeCCHHHHHHHHHHc----CCeEeeCC-c--------ccCC---
Q 018138          279 -AVLELTYNH-G--V-T------EYDKGNGYAQIAIGTDDVYKTAEAIKLS----GGKITREP-G--------PLPG---  331 (360)
Q Consensus       279 -~~l~l~~~~-~--~-~------~~~~g~g~~hiaf~V~Dl~~~~~~l~~~----G~~i~~~p-~--------~~~~---  331 (360)
                       ..+.|.... +  . .      ....|+|++||||.|+||.+++++|+++    |+++...| .        +.++   
T Consensus       233 ~v~ipLnEP~~~~~~~SqI~eFL~~~~G~GIQHIAl~tdDI~~av~~Lra~~~~~Gv~fL~~Pp~~YYd~L~~R~~~~l~  312 (398)
T PLN02875        233 MVLLPLNEPTFGTKRKSQIQTYLEHNEGPGLQHLALKSDDIFGTLREMRARSHIGGFEFMPPPPPTYYKNLKKRVGDVLT  312 (398)
T ss_pred             cEEEEeccCCCCCCCcChHHHHHHhcCCCCeeEEEeecCCHHHHHHHHHhccccCCeecCCCChHHHHHHHHHHhccCCC
Confidence             011111111 0  0 0      1234689999999999999999999999    99999855 1        1221   


Q ss_pred             -------CCcEEEEEECCCCCeEEEEcC
Q 018138          332 -------INTKITACLDPDGWKSVFVDN  352 (360)
Q Consensus       332 -------~~~~~~~~~DPdG~~iel~~~  352 (360)
                             ....+.+=+|.+|.++.++..
T Consensus       313 ~e~~~~L~~~~ILvD~d~~G~LLQIFTk  340 (398)
T PLN02875        313 EEQIKECEELGILVDKDDQGVLLQIFTK  340 (398)
T ss_pred             hhhHHHHHHcCEEEecCCCceEEEEecc
Confidence                   012355557777888777655

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=99.63  E-value=1.3e-14  Score=116.78  Aligned_cols=112  Identities=27%  Similarity=0.441  Sum_probs=86.9

Q ss_pred             ceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEEC
Q 018138          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVE  192 (360)
Q Consensus       113 ~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~  192 (360)
                      ++|+|+.|.|+|++++++||+++|||++..+.+      ..+|+..+. ..++.+.+....       ..+..|++|.|+
T Consensus         1 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~------~~~~~~~~~-~~~~~~~~~~~~-------~~~~~h~~~~v~   66 (117)
T cd07240           1 RRIAYAELEVPDLERALEFYTDVLGLTVLDRDA------GSVYLRCSE-DDHHSLVLTEGD-------EPGVDALGFEVA   66 (117)
T ss_pred             CceeEEEEecCCHHHHHHHHHhccCcEEEeecC------CeEEEecCC-CCcEEEEEEeCC-------CCCceeEEEEcC
Confidence            579999999999999999999999999986532      136666552 224455554421       246889999997


Q ss_pred             ---CHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecC
Q 018138          193 ---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (360)
Q Consensus       193 ---Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~  239 (360)
                         ++++++++++++|+++...|...+++++ .+|+.||+|+.+|++...
T Consensus        67 ~~~~v~~~~~~l~~~g~~~~~~~~~~~~~~~-~~~~~DP~G~~ie~~~~~  115 (117)
T cd07240          67 SEEDLEALAAHLEAAGVAPEEASDPEPGVGR-GLRFQDPDGHLLELFVEA  115 (117)
T ss_pred             CHHHHHHHHHHHHHcCCceEEcCccCCCCce-EEEEECCCCCEEEEEEcc
Confidence               6899999999999999887764444444 689999999999998753

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>PRK06724 hypothetical protein; Provisional

Probab=99.63  E-value=1.1e-14  Score=120.15  Aligned_cols=113  Identities=17%  Similarity=0.227  Sum_probs=79.2

Q ss_pred             ccceeEEEEEEeCCHHHHHHHHHHhc---CCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEE
Q 018138          111 DKRRMLHVVYRVGDLDKTIKFYTECL---GMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHF  187 (360)
Q Consensus       111 ~~~~l~HV~l~V~Dle~a~~FY~~vL---G~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi  187 (360)
                      |+.+|+||+|.|+|++++++||+++|   ||+.....         .+ .  .+  ...+.+......  .....|..|+
T Consensus         4 ~~~~i~Hv~l~V~Dle~s~~FY~~vlg~lg~~~~~~~---------~~-~--~g--~~~l~l~~~~~~--~~~~~g~~h~   67 (128)
T PRK06724          4 LRAGIHHIEFWVANLEESISFYDMLFSIIGWRKLNEV---------AY-S--TG--ESEIYFKEVDEE--IVRTLGPRHI   67 (128)
T ss_pred             cCcccCEEEEEeCCHHHHHHHHHHHHhhCCcEEeeeE---------ee-e--CC--CeeEEEecCCcc--ccCCCCceeE
Confidence            67789999999999999999999966   66654211         11 1  11  112222211110  1123468899


Q ss_pred             EEEE---CCHHHHHHHHHHcCCeEecCCeecCC--CCEEEEEEECCCCCEEEEeecC
Q 018138          188 GIAV---EDVAKTVDLVKAKGGKVTREPGPVKG--GNTVIAFIEDPDGYKFELLERG  239 (360)
Q Consensus       188 ~f~V---~Dld~~~~rL~~~G~~~~~~p~~~~~--g~~~~~~~~DPdG~~iEl~~~~  239 (360)
                      ||.|   +|+|+++++|+++|+++..+|...+.  ++.+.+||+||||+.||+...+
T Consensus        68 af~v~~~~dvd~~~~~l~~~G~~~~~~p~~~~~~~~g~~~~~f~DPdG~~iEl~~~~  124 (128)
T PRK06724         68 CYQAINRKVVDEVAEFLSSTKIKIIRGPMEMNHYSEGYYTIDFYDPNGFIIEVAYTP  124 (128)
T ss_pred             EEecCChHHHHHHHHHHHHCCCEEecCCcccCCCCCCEEEEEEECCCCCEEEEEeCC
Confidence            9998   67999999999999999888765432  3345789999999999998764

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.62  E-value=2.2e-14  Score=117.61  Aligned_cols=117  Identities=22%  Similarity=0.366  Sum_probs=86.2

Q ss_pred             eeEEEEEEeCCHHHHHHHHHHhc---CCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCC---CcCCCcceEE
Q 018138          114 RMLHVVYRVGDLDKTIKFYTECL---GMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK---YDIGTGFGHF  187 (360)
Q Consensus       114 ~l~HV~l~V~Dle~a~~FY~~vL---G~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~---~~~g~g~~hi  187 (360)
                      +|+||+|.|+|++++++||+++|   ||++..+..  ..   ..|...   ..+..+.+.......+   ...+.++.|+
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~--~~---~~~~~~---~~~~~i~l~~~~~~~~~~~~~~~~g~~hi   72 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWE--DG---RSWRAG---DGGTYLVLQQADGESAGRHDRRNPGLHHL   72 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeec--cC---ceEEec---CCceEEEEEecccCCCcccccCCcCeeEE
Confidence            58999999999999999999999   999986542  11   133332   1235677766443221   1234578999


Q ss_pred             EEEEC---CHHHHHHHHHHcCCeEecCCeec--CCCCEEEEEEECCCCCEEEEeec
Q 018138          188 GIAVE---DVAKTVDLVKAKGGKVTREPGPV--KGGNTVIAFIEDPDGYKFELLER  238 (360)
Q Consensus       188 ~f~V~---Dld~~~~rL~~~G~~~~~~p~~~--~~g~~~~~~~~DPdG~~iEl~~~  238 (360)
                      +|.|+   |+++++++|+++|+.+...+...  ..++...+|++||||+.+||+.+
T Consensus        73 a~~v~~~~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DpdG~~ie~~~~  128 (128)
T cd07242          73 AFRAPSREAVDELYARLAKRGAEILYAPREPYAGGPGYYALFFEDPDGIRLELVAP  128 (128)
T ss_pred             EEEcCCHHHHHHHHHHHHHcCCeEecCCcccccCCCcEEEEEEECCCCcEEEEEeC
Confidence            99997   48999999999999998876642  22334579999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd09011 Glo_EDI_BRP_like_23 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.61  E-value=1.5e-14  Score=117.54  Aligned_cols=114  Identities=20%  Similarity=0.218  Sum_probs=81.0

Q ss_pred             ceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEe----cCCCCCCcCCCcceEEE
Q 018138          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTY----NYGVDKYDIGTGFGHFG  188 (360)
Q Consensus       113 ~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~----~~~~~~~~~g~g~~hi~  188 (360)
                      +++.|+.|.|+|++++.+||+++|||++..+.+  .  .  ..+..+     ..+.+..    .........+.+..|++
T Consensus         1 ~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~--~--~--~~~~~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~l~   69 (120)
T cd09011           1 MKFKNPLLVVKDIEKSKKFYEKVLGLKVVMDFG--E--N--VTFEGG-----FALQEGYSWLEGISKADIIEKSNNFELY   69 (120)
T ss_pred             CEEEEEEEEECCHHHHHHHHHHhcCCEEeeccC--c--e--EEEecc-----ceeccchhhhccCCcccccccCCceEEE
Confidence            478999999999999999999999999864221  1  1  112111     1221111    00011112233557999


Q ss_pred             EEECCHHHHHHHHHHcCC-eEecCCeecCCCCEEEEEEECCCCCEEEEeec
Q 018138          189 IAVEDVAKTVDLVKAKGG-KVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (360)
Q Consensus       189 f~V~Dld~~~~rL~~~G~-~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~  238 (360)
                      |.|+|+++++++|+++|+ ++..+|...++|.+ .++|+|||||.|||.++
T Consensus        70 ~~v~dvd~~~~~l~~~g~~~~~~~~~~~~~g~r-~~~~~DPdGn~iei~~~  119 (120)
T cd09011          70 FEEEDFDAFLDKLKRYDNIEYVHPIKEHPWGQR-VVRFYDPDKHIIEVGES  119 (120)
T ss_pred             EEehhhHHHHHHHHhcCCcEEecCcccCCCccE-EEEEECCCCCEEEEecc
Confidence            999999999999999986 68888888777765 69999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PLN02367 lactoylglutathione lyase

Probab=99.61  E-value=1e-14  Score=130.44  Aligned_cols=106  Identities=31%  Similarity=0.497  Sum_probs=84.1

Q ss_pred             CCceeceeeecCHHHHHHHhhhcceEEeeeccCC-----------------------------------CccEEEEEEeC
Q 018138          243 EPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPED-----------------------------------KNAVLELTYNH  287 (360)
Q Consensus       243 ~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~-----------------------------------~~~~l~l~~~~  287 (360)
                      -.+.|++|+|+|++++++||++    +||++.-.                                   ....+||++++
T Consensus        74 ~~~~HtmlRVkDle~Sl~FYt~----vLGm~ll~r~d~pe~~f~lyFL~~~~~~~~p~d~~~r~~~~~~~~~~LELt~n~  149 (233)
T PLN02367         74 YIMQQTMYRIKDPKASLDFYSR----VLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQKATIELTHNW  149 (233)
T ss_pred             cEEEEEEEEeCCHHHHHHHHHH----hcCCEEeEEEecCCCcEEEEEeecCCccccccccccceeeccCCCCEEEEecCC
Confidence            3789999999999999999996    55554100                                   12367888877


Q ss_pred             Cccc------ccCC----CCeeEEEEEeCCHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCcc
Q 018138          288 GVTE------YDKG----NGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  354 (360)
Q Consensus       288 ~~~~------~~~g----~g~~hiaf~V~Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  354 (360)
                      +...      +..+    .|++|++|.|+|+++++++|+++|+++..+|...+.  .++++++||||++|||++...
T Consensus       150 g~e~~~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~erL~a~Gv~~v~~P~~g~~--~riaFIkDPDGn~IEL~e~~~  224 (233)
T PLN02367        150 GTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFEELGVEFVKKPNDGKM--KGIAFIKDPDGYWIEIFDLKT  224 (233)
T ss_pred             CCCccccchhcccCCCCCCCceEEEEEcCCHHHHHHHHHHCCCEEEeCCccCCc--eEEEEEECCCCCEEEEEeccc
Confidence            6542      4433    489999999999999999999999999987764333  578999999999999999764

>cd08351 ChaP_like ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

Probab=99.60  E-value=3.1e-14  Score=116.38  Aligned_cols=112  Identities=17%  Similarity=0.301  Sum_probs=83.1

Q ss_pred             ccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEE
Q 018138          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  190 (360)
Q Consensus       111 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~  190 (360)
                      |.++++|+.|.|+|++++++||+++|||++....    +.+  .++..++   +..+.+....      ...+..|++|.
T Consensus         1 ~~~~~~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~----~~~--~~~~~~~---~~~l~~~~~~------~~~~~~h~a~~   65 (123)
T cd08351           1 MTVTLNHTIVPARDREASAEFYAEILGLPWAKPF----GPF--AVVKLDN---GVSLDFAQPD------GEIPPQHYAFL   65 (123)
T ss_pred             CcceEeEEEEEcCCHHHHHHHHHHhcCCEeeecc----CCE--EEEEcCC---CcEEEEecCC------CCCCcceEEEE
Confidence            3578999999999999999999999999987522    112  3333332   2356655421      11246799998


Q ss_pred             EC--CHHHHHHHHHHcCCeEecCCeec-------CCCCEEEEEEECCCCCEEEEeec
Q 018138          191 VE--DVAKTVDLVKAKGGKVTREPGPV-------KGGNTVIAFIEDPDGYKFELLER  238 (360)
Q Consensus       191 V~--Dld~~~~rL~~~G~~~~~~p~~~-------~~g~~~~~~~~DPdG~~iEl~~~  238 (360)
                      ++  |+++++++|+++|+++..+|...       .+|. +.+||+|||||.||+++.
T Consensus        66 v~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~-~~~~f~DPdG~~iEl~~~  121 (123)
T cd08351          66 VSEEEFDRIFARIRERGIDYWADPQRTEPGQINTNDGG-RGVYFLDPDGHLLEIITR  121 (123)
T ss_pred             eCHHHHHHHHHHHHHcCCceecCCcccccccccCCCCe-eEEEEECCCCCEEEEEec
Confidence            86  69999999999999987766543       2344 479999999999999986

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

Probab=99.60  E-value=2.5e-14  Score=115.80  Aligned_cols=113  Identities=27%  Similarity=0.358  Sum_probs=84.0

Q ss_pred             cceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEE
Q 018138          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (360)
Q Consensus       112 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V  191 (360)
                      +.+|+|+.|.|+|++++++||+++|||++.....    .  .+++..+. ...+.+.+...       ...++.|++|.+
T Consensus         1 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~----~--~~~~~~~~-~~~~~~~~~~~-------~~~~~~~~~~~v   66 (120)
T cd08362           1 VTALRGVGLGVPDLAAAAAFYREVWGLSVVAEDD----G--IVYLRATG-SEHHILRLRRS-------DRNRLDVVSFSV   66 (120)
T ss_pred             CceeeEEEEecCCHHHHHHHHHhCcCcEEEEecC----C--EEEEECCC-CccEEEEeccC-------CCCCCceEEEEe
Confidence            3689999999999999999999999999875422    2  24555332 23344444321       123578999999


Q ss_pred             C---CHHHHHHHHHHcCCeEecCCeec--CCCCEEEEEEECCCCCEEEEeecC
Q 018138          192 E---DVAKTVDLVKAKGGKVTREPGPV--KGGNTVIAFIEDPDGYKFELLERG  239 (360)
Q Consensus       192 ~---Dld~~~~rL~~~G~~~~~~p~~~--~~g~~~~~~~~DPdG~~iEl~~~~  239 (360)
                      +   ++++++++++++|+++..+|...  ++++ +.+++.||+||.|||+...
T Consensus        67 ~~~~~l~~~~~~l~~~G~~~~~~~~~~~~~~~~-~~~~~~DP~G~~iel~~~~  118 (120)
T cd08362          67 ASRADVDALARQVAARGGTVLSEPGATDDPGGG-YGFRFFDPDGRLIEFSADV  118 (120)
T ss_pred             CCHHHHHHHHHHHHHcCCceecCCcccCCCCCc-eEEEEECCCCCEEEEEecc
Confidence            4   69999999999999988776433  3343 4689999999999998764

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=99.60  E-value=6.1e-14  Score=116.08  Aligned_cols=119  Identities=25%  Similarity=0.432  Sum_probs=85.4

Q ss_pred             eeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEECC
Q 018138          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVED  193 (360)
Q Consensus       114 ~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~D  193 (360)
                      +|+||+|.|+|++++++||+++|||++..+...    ...+++..+. ..+..+.+.............++.|++|.|+|
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~----~~~~~~~~~~-~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~~   75 (134)
T cd08348           1 RLSHVVLYVRDLEAMVRFYRDVLGFTVTDRGPL----GGLVFLSRDP-DEHHQIALITGRPAAPPPGPAGLNHIAFEVDS   75 (134)
T ss_pred             CeeEEEEEecCHHHHHHHHHHhcCCEEEeeccC----CcEEEEEecC-CCceEEEEEecCCCCCCCCCCCceEEEEEeCC
Confidence            589999999999999999999999998755321    1245665441 12345666554332211234578899999987


Q ss_pred             HH---HHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCC
Q 018138          194 VA---KTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (360)
Q Consensus       194 ld---~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~  240 (360)
                      ++   +++++|.++|+++...+. . ++ ...+|++||+||.||++...+
T Consensus        76 ~~~v~~~~~~l~~~G~~~~~~~~-~-~~-~~~~~~~DP~G~~ie~~~~~~  122 (134)
T cd08348          76 LDDLRDLYERLRAAGITPVWPVD-H-GN-AWSIYFRDPDGNRLELFVDTP  122 (134)
T ss_pred             HHHHHHHHHHHHHCCCCccccCC-C-Cc-eeEEEEECCCCCEEEEEEcCC
Confidence            55   588999999998776542 2 22 346899999999999998765

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

Probab=99.60  E-value=3.9e-14  Score=114.08  Aligned_cols=110  Identities=23%  Similarity=0.326  Sum_probs=80.9

Q ss_pred             cceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEE
Q 018138          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (360)
Q Consensus       112 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V  191 (360)
                      +++|+||.|.|+|++++++||++ |||++..+.+   .   .+|+..+.. .++.+.+...       ...++.|++|.|
T Consensus         1 ~~~l~hv~l~v~Dl~~s~~FY~~-lGl~~~~~~~---~---~~~~~~~~~-~~~~~~~~~~-------~~~~~~~~af~v   65 (113)
T cd07267           1 LTDIAHVRFEHPDLDKAERFLTD-FGLEVAARTD---D---ELYYRGYGT-DPFVYVARKG-------EKARFVGAAFEA   65 (113)
T ss_pred             CcEEEEEEEccCCHHHHHHHHHH-cCCEEEEecC---C---eEEEecCCC-ccEEEEcccC-------CcCcccEEEEEE
Confidence            46899999999999999999999 9999865421   1   356654322 2233322111       124688999999


Q ss_pred             CCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeec
Q 018138          192 EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (360)
Q Consensus       192 ~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~  238 (360)
                      +|.+++.+.+++.|......+. .+++++ .+||+|||||.|||+..
T Consensus        66 ~~~~~~~~~~~~~g~~~~~~~~-~~~~~~-~~~~~DPdG~~iEl~~~  110 (113)
T cd07267          66 ASRADLEKAAALPGASVIDDLE-APGGGK-RVTLTDPDGFPVELVYG  110 (113)
T ss_pred             CCHHHHHHHHHcCCCeeecCCC-CCCCce-EEEEECCCCCEEEEEec
Confidence            9999999999999998765432 344444 69999999999999875

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd07264 Glo_EDI_BRP_like_15 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.59  E-value=4.9e-14  Score=114.86  Aligned_cols=115  Identities=21%  Similarity=0.310  Sum_probs=80.3

Q ss_pred             eEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecC--------C--CCCCcCCCcc
Q 018138          115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY--------G--VDKYDIGTGF  184 (360)
Q Consensus       115 l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~--------~--~~~~~~g~g~  184 (360)
                      +.|+.|.|+|++++.+||+++|||++.....  .+.+  ..+..+  .  ..+.+....        .  ........+.
T Consensus         1 ~~~~~l~v~D~~~s~~FY~~~lG~~~~~~~~--~~~~--~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (125)
T cd07264           1 FGYTIIYVEDVEKTLEFYERAFGFERRFLHE--SGDY--GELETG--E--TTLAFASHDLAESNLKGGFVKADPAQPPAG   72 (125)
T ss_pred             CceEEEEEcCHHHHHHHHHHhhCCeEEeecC--CCcE--EEecCC--c--EEEEEEcccccccccccCccCCccccCCCc
Confidence            4699999999999999999999999864322  1122  112211  1  122221100        0  0111112344


Q ss_pred             eEEEEEECCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeec
Q 018138          185 GHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (360)
Q Consensus       185 ~hi~f~V~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~  238 (360)
                      .|++|.|+|+++++++++++|+++..+|...++|.+ .++++|||||.+|++++
T Consensus        73 ~~~~~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~~~~~~~  125 (125)
T cd07264          73 FEIAFVTDDVAAAFARAVEAGAVLVSEPKEKPWGQT-VAYVRDINGFLIELCSP  125 (125)
T ss_pred             EEEEEEcCCHHHHHHHHHHcCCEeccCCccCCCCcE-EEEEECCCCCEEEEecC
Confidence            689999999999999999999999888877777765 68999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08355 Glo_EDI_BRP_like_14 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.58  E-value=1.2e-13  Score=112.35  Aligned_cols=114  Identities=20%  Similarity=0.227  Sum_probs=82.9

Q ss_pred             EEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCC----CcCCCcceEEEEEECCH
Q 018138          119 VYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK----YDIGTGFGHFGIAVEDV  194 (360)
Q Consensus       119 ~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~----~~~g~g~~hi~f~V~Dl  194 (360)
                      .|.|+|++++++||+++|||++......++.....+.+..++.    .+.+........    .....+..|++|.|+|+
T Consensus         4 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~d~   79 (122)
T cd08355           4 TLRYRDAAAAIDWLTDAFGFEERLVVPDDDGGVAHAELRFGDG----GVMVGSVRDDYRASSARAGGAGTQGVYVVVDDV   79 (122)
T ss_pred             EEEECCHHHHHHHHHHhcCCEEEEEEeCCCCcEEEEEEEECCE----EEEEecCCCcccccccccCCCceEEEEEEECCH
Confidence            3899999999999999999999876433333333445555421    233332111110    12234567999999999


Q ss_pred             HHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEee
Q 018138          195 AKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (360)
Q Consensus       195 d~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~  237 (360)
                      ++++++++++|+++..+|...++|.+ .++++|||||.|+|.+
T Consensus        80 d~~~~~l~~~G~~v~~~~~~~~~g~~-~~~~~DPdG~~~~l~~  121 (122)
T cd08355          80 DAHYERARAAGAEILREPTDTPYGSR-EFTARDPEGNLWTFGT  121 (122)
T ss_pred             HHHHHHHHHCCCEEeeCccccCCCcE-EEEEECCCCCEEEEec
Confidence            99999999999999988887777755 5899999999999964

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=99.58  E-value=2.2e-14  Score=130.12  Aligned_cols=234  Identities=22%  Similarity=0.394  Sum_probs=162.6

Q ss_pred             ccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCC--CeEEEEEeeCCCCceEEEEEEecCCCC--C-----CcCC
Q 018138          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPED--RYTNAFLGYGPEDSHFVVELTYNYGVD--K-----YDIG  181 (360)
Q Consensus       111 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~--~~~~~~l~~g~~~~~~~lel~~~~~~~--~-----~~~g  181 (360)
                      ...+++||.+.|.|...+.+||+..|||+.....+.+-+  .+...-++-|  .  .+.-+..+..+.  .     ..+|
T Consensus        14 ~~l~f~Hi~F~vgna~q~A~~y~~~fGfep~A~~~letg~~~~~s~alr~g--~--~vFv~~s~~~p~~~~~G~~l~~Hg   89 (381)
T KOG0638|consen   14 KFLRFHHIEFWVGNAKQAARWYCSGFGFEPLAYRGLETGSREWASHALRQG--K--IVFVFNSAYNPDNSEYGDHLVKHG   89 (381)
T ss_pred             ceeeeeEEEEEecCcHHHHHHHHhhcCCcchhcccccccchHHHHHHhhcC--C--EEEEEecCCCCCchhhhhhhhhcc
Confidence            467899999999999999999999999999865432211  1111122211  1  122222222111  1     2356


Q ss_pred             CcceEEEEEECCHHHHHHHHHHcCCeEecCCeecCC--CCEEEEEEECCCCCEEEEeecCCC------------------
Q 018138          182 TGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKG--GNTVIAFIEDPDGYKFELLERGPT------------------  241 (360)
Q Consensus       182 ~g~~hi~f~V~Dld~~~~rL~~~G~~~~~~p~~~~~--g~~~~~~~~DPdG~~iEl~~~~~~------------------  241 (360)
                      .|+.-+||+|+|.+++.+.+.++|+++..+|....+  |..+++.+..+......+++....                  
T Consensus        90 dgvkdvafeVeD~da~~~~~va~Ga~v~~~p~~~~da~G~v~~A~l~tygd~thtlvEr~~y~g~FLPGF~~v~~~~~fp  169 (381)
T KOG0638|consen   90 DGVKDVAFEVEDADAIFQEAVANGAKVVRPPWEESDAQGAVTYAVLKTYGDTTHTLVERKGYKGPFLPGFEPVSSDALFP  169 (381)
T ss_pred             cchhceEEEecchHHHHHHHHHcCCcccCCcceeeccCCcEEEEEEecccchhhhhhhhccccccCCCCcccCccccccC
Confidence            788889999999999999999999999999877654  566778888888888888876531                  


Q ss_pred             ------CCCceeceeeec--CHHHHHHHhhhcceEEeeec----cCCC-----------------ccEEEEEEeC---Cc
Q 018138          242 ------PEPLCQVMLRVG--DLDRAINFYKKYTIAVMGYG----PEDK-----------------NAVLELTYNH---GV  289 (360)
Q Consensus       242 ------~~~i~hv~L~V~--D~e~a~~FY~~~~~~~lG~~----~~~~-----------------~~~l~l~~~~---~~  289 (360)
                            ..+++|++.+++  .++.+.+||.+    +|||.    .++.                 ...+.+..+.   |.
T Consensus       170 ~l~~~~~~~iDH~vgn~p~~em~sa~~wy~~----~l~Fhrfwsvdd~~v~te~SaLrs~vlan~~esi~mpinEp~~G~  245 (381)
T KOG0638|consen  170 KLPKGGLNRIDHVVGNQPDGEMESALRWYEK----CLGFHRFWSVDDSQVHTEYSALRSIVLANYEESIKMPINEPAPGK  245 (381)
T ss_pred             CCCccceeehhhhhccCCcccchHHHHHHHH----hhcccccccCCcchhhhHHHHHHHHHHhcCCccEEEeccCCCCCC
Confidence                  137899999998  58899999999    89875    2221                 1222333331   22


Q ss_pred             c---------cccCCCCeeEEEEEeCCHHHHHHHHHHcCCeEeeCCccc--------C--C----------CCcEEEEEE
Q 018138          290 T---------EYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPL--------P--G----------INTKITACL  340 (360)
Q Consensus       290 ~---------~~~~g~g~~hiaf~V~Dl~~~~~~l~~~G~~i~~~p~~~--------~--~----------~~~~~~~~~  340 (360)
                      +         +++.|.|++|+++.++|+-.+.+.++++|+++...|...        .  .          ....+..=+
T Consensus       246 k~ksQIqeyv~y~gG~GvQHiaL~tedIi~Ai~~lr~rG~eFLs~Ps~YYqnl~erl~~~~~~vked~~~l~el~ILvD~  325 (381)
T KOG0638|consen  246 KKKSQIQEYVEYHGGAGVQHIALNTEDIIEAIRGLRARGGEFLSPPSTYYQNLKERLSTSIRKVKEDIKLLEELGILVDF  325 (381)
T ss_pred             ccHHHHHHHHHhcCCCceeeeeecchHHHHHHHHHHhcCCccccCCHHHHHhHHHHhhhhhhhhhccHHHHHHcCeEEec
Confidence            1         256789999999999999999999999999999887531        1  0          001234446


Q ss_pred             CCCCCeEEEEcC
Q 018138          341 DPDGWKSVFVDN  352 (360)
Q Consensus       341 DPdG~~iel~~~  352 (360)
                      |-.|.++.++..
T Consensus       326 De~gyLLQIFTK  337 (381)
T KOG0638|consen  326 DENGYLLQIFTK  337 (381)
T ss_pred             CCCcEEeeeecc
Confidence            777888887654

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.57  E-value=8.3e-14  Score=112.66  Aligned_cols=111  Identities=19%  Similarity=0.212  Sum_probs=80.9

Q ss_pred             EEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCC-----CCcCCCcceEEEEEE
Q 018138          117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD-----KYDIGTGFGHFGIAV  191 (360)
Q Consensus       117 HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~-----~~~~g~g~~hi~f~V  191 (360)
                      +..|.|+|++++.+||+++|||++..+.    ..  .+.+..++.  ...+.+.......     ....+.+ .|++|.|
T Consensus         4 ~~~l~v~D~~~s~~FY~~~lG~~~~~~~----~~--~~~~~~~~~--~~~l~l~~~~~~~~~~~~~~~~~~~-~~~~~~v   74 (119)
T cd08359           4 YPVIVTDDLAETADFYVRHFGFTVVFDS----DW--YVSLRSPDG--GVELAFMLPGHETVPAAQYQFQGQG-LILNFEV   74 (119)
T ss_pred             eeEEEECCHHHHHHHHHHhhCcEEEecc----Cc--EEEEecCCC--ceEEEEccCCCCCCcchhcccCCce-EEEEEEE
Confidence            4679999999999999999999997542    11  234443322  2455554322211     1112333 4899999


Q ss_pred             CCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEee
Q 018138          192 EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (360)
Q Consensus       192 ~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~  237 (360)
                      +|+++++++++++|+++..+|...++|.+ .++++||+|+.|||+|
T Consensus        75 ~did~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DP~G~~ie~~~  119 (119)
T cd08359          75 DDVDAEYERLKAEGLPIVLPLRDEPWGQR-HFIVRDPNGVLIDIVQ  119 (119)
T ss_pred             CCHHHHHHHHHhcCCCeeeccccCCCcce-EEEEECCCCCEEEEEC
Confidence            99999999999999998888877777754 6899999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.57  E-value=2.2e-13  Score=110.29  Aligned_cols=114  Identities=23%  Similarity=0.244  Sum_probs=85.5

Q ss_pred             EEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCC--CCcCCCcceEEEEEECCHHH
Q 018138          119 VYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD--KYDIGTGFGHFGIAVEDVAK  196 (360)
Q Consensus       119 ~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~--~~~~g~g~~hi~f~V~Dld~  196 (360)
                      .|.|+|++++.+||+++|||++..+...+++....+.+..++    ..+.+.......  ....+.+..|++|.|+|+++
T Consensus         6 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~d~~~   81 (122)
T cd07246           6 YLIVRDAAAAIDFYKKAFGAEELERMPDDDGRVMHAELRIGD----SVLMLADEFPEHGSPASWGGTPVSLHLYVEDVDA   81 (122)
T ss_pred             EEEECCHHHHHHHHHHhhCCEEEEEEeCCCCCEEEEEEEECC----EEEEEecCCcccCCCCCCCCceEEEEEEeCCHHH
Confidence            488999999999999999999987655444444455555543    245554322110  11223456799999999999


Q ss_pred             HHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEee
Q 018138          197 TVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (360)
Q Consensus       197 ~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~  237 (360)
                      +++++.++|+++..+|....+|.+ .++++||+|+.|+|.+
T Consensus        82 ~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DP~G~~~~l~~  121 (122)
T cd07246          82 TFARAVAAGATSVMPPADQFWGDR-YGGVRDPFGHRWWIAT  121 (122)
T ss_pred             HHHHHHHCCCeEecCcccccccce-EEEEECCCCCEEEEec
Confidence            999999999999988877777754 6999999999999976

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=99.56  E-value=2.9e-14  Score=118.84  Aligned_cols=105  Identities=22%  Similarity=0.281  Sum_probs=80.0

Q ss_pred             ceeceeeecCHHHHHHHhhhcceEEeeeccCCC--c--c----------EEEEEEeCCccc------ccCCCCeeEEEEE
Q 018138          245 LCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK--N--A----------VLELTYNHGVTE------YDKGNGYAQIAIG  304 (360)
Q Consensus       245 i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~--~--~----------~l~l~~~~~~~~------~~~g~g~~hiaf~  304 (360)
                      ++|+.|.|.|++++.+||++    +|||+....  .  .          .+.+........      ...+.+.+|++|.
T Consensus         1 ~~Hi~i~V~D~e~s~~FY~~----vLGf~~~~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~g~~hia~~   76 (136)
T cd08342           1 FDHVEFYVGNAKQLASWFST----KLGFEPVAYHGSEDKASYLLRQGDINFVLNSPLNSFAPVADFLEKHGDGVCDVAFR   76 (136)
T ss_pred             CeEEEEEeCCHHHHHHHHHH----hcCCeEEEecCCCceEEEEEEcCCEEEEEecCCCCCCchHHHHHhcCCceEEEEEE
Confidence            57999999999999999999    899864211  0  1          111111111000      1134688999999


Q ss_pred             eCCHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCcc
Q 018138          305 TDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  354 (360)
Q Consensus       305 V~Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  354 (360)
                      |+|+++++++++++|+++..+|...+++ .++++++||||+.|||++...
T Consensus        77 V~Dvda~~~~l~~~G~~v~~~p~~~~~~-~~~~~i~dp~G~~ie~~~~~~  125 (136)
T cd08342          77 VDDAAAAYERAVARGAKPVQEPVEEPGE-LKIAAIKGYGDSLHTLVDRKG  125 (136)
T ss_pred             eCCHHHHHHHHHHcCCeEccCceecCCe-EEEEEEeccCCcEEEEEecCC
Confidence            9999999999999999999999875553 789999999999999999754

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.55  E-value=1.3e-13  Score=112.29  Aligned_cols=114  Identities=25%  Similarity=0.293  Sum_probs=80.1

Q ss_pred             eEEEEEEeCCHHHHHHHHHHh---cCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEE
Q 018138          115 MLHVVYRVGDLDKTIKFYTEC---LGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (360)
Q Consensus       115 l~HV~l~V~Dle~a~~FY~~v---LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V  191 (360)
                      |+||.|.|+|++++++||+++   |||++..+.   .+.  .+++..+..  ...+.+........ ....+..|++|.|
T Consensus         1 l~hv~l~v~d~~~s~~FY~~~f~~lg~~~~~~~---~~~--~~~~~~~~~--~~~~~l~~~~~~~~-~~~~~~~hi~f~v   72 (123)
T cd07262           1 IDHVTLGVNDLERARAFYDAVLAPLGIKRVMED---GPG--AVGYGKGGG--GPDFWVTKPFDGEP-ATAGNGTHVAFAA   72 (123)
T ss_pred             CcEEEEecCcHHHHHHHHHHHHhhcCceEEeec---CCc--eeEeccCCC--CceEEEeccccCCC-CCCCCceEEEEEC
Confidence            579999999999999999999   699987543   111  233333222  33455544322111 1223457999999


Q ss_pred             CC---HHHHHHHHHHcCCeEecCCeecCC--CCEEEEEEECCCCCEEEEe
Q 018138          192 ED---VAKTVDLVKAKGGKVTREPGPVKG--GNTVIAFIEDPDGYKFELL  236 (360)
Q Consensus       192 ~D---ld~~~~rL~~~G~~~~~~p~~~~~--g~~~~~~~~DPdG~~iEl~  236 (360)
                      +|   +++++++++++|+.+..+|....+  +....+||+|||||.||++
T Consensus        73 ~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ie~~  122 (123)
T cd07262          73 PSREAVDAFHAAALAAGGTDEGAPGLRPHYGPGYYAAYVRDPDGNKIEAV  122 (123)
T ss_pred             CCHHHHHHHHHHHHHcCCccCCCCCCCCCCCCCeEEEEEECCCCCEEEEe
Confidence            86   888999999999998887766543  2334689999999999996

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin

Probab=99.55  E-value=8.3e-14  Score=111.51  Aligned_cols=109  Identities=24%  Similarity=0.407  Sum_probs=78.2

Q ss_pred             EEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEEC--CH
Q 018138          117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVE--DV  194 (360)
Q Consensus       117 HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~--Dl  194 (360)
                      ||.|.|+|++++++||+++|||++..+.+      ...++..+    ...+.+.......  ....+..|++|.|+  |+
T Consensus         1 Hv~l~v~d~~~s~~Fy~~~lg~~~~~~~~------~~~~~~~~----~~~l~~~~~~~~~--~~~~~~~hiaf~v~~~d~   68 (113)
T cd08345           1 HITLIVKDLNKSIAFYRDILGAELIYSSS------KEAYFELA----GLWICLMEEDSLQ--GPERTYTHIAFQIQSEEF   68 (113)
T ss_pred             CeeEEECCHHHHHHHHHHhcCCeeeeccC------ceeEEEec----CeEEEeccCCCcC--CCCCCccEEEEEcCHHHH
Confidence            88999999999999999999999875432      12445443    1345544332211  12346789999994  79


Q ss_pred             HHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeec
Q 018138          195 AKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (360)
Q Consensus       195 d~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~  238 (360)
                      ++++++++++|+++...+.....++ ..+|++||||+.||++..
T Consensus        69 ~~~~~~l~~~G~~~~~~~~~~~~~~-~~~~~~DPdG~~iEi~~~  111 (113)
T cd08345          69 DEYTERLKALGVEMKPERPRVQGEG-RSIYFYDPDGHLLELHAG  111 (113)
T ss_pred             HHHHHHHHHcCCccCCCccccCCCc-eEEEEECCCCCEEEEEeC
Confidence            9999999999999865433323333 368999999999999864

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=99.55  E-value=6.2e-14  Score=119.39  Aligned_cols=108  Identities=19%  Similarity=0.232  Sum_probs=82.1

Q ss_pred             CceeceeeecCHHHHHHHhhhcceEEeeeccCCC--------ccEEEEEEeCCc-----c--c--ccCCCCeeEEEEEeC
Q 018138          244 PLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK--------NAVLELTYNHGV-----T--E--YDKGNGYAQIAIGTD  306 (360)
Q Consensus       244 ~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~--------~~~l~l~~~~~~-----~--~--~~~g~g~~hiaf~V~  306 (360)
                      +++||.|.|+|++++++||++    +||++..+.        .....+....+.     .  .  ...+++++|+||.|+
T Consensus         1 ri~Hv~l~V~Dle~a~~FY~~----~LG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~g~~Hiaf~v~   76 (153)
T cd07257           1 RLGHVVLEVPDFAASFDWYTE----TFGLKPSDVIYLPGPGNPVAAFLRLDRGEEYVDHHTLALAQGPESGVHHAAFEVH   76 (153)
T ss_pred             CccEEEEecCCHHHHHHHHHH----hcCCeEEeeEecCCCCCcEEEEEecCCCCCcccchHHHHhcCCCCceeEEEEEcC
Confidence            578999999999999999999    999875321        112222222110     0  0  112468999999999


Q ss_pred             CHHHHH---HHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCccc
Q 018138          307 DVYKTA---EAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDF  355 (360)
Q Consensus       307 Dl~~~~---~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  355 (360)
                      |++++.   ++|+++|+++.++|+++..+...++|++|||||.|||....+-
T Consensus        77 die~~~~~~~~L~~~Gv~v~~~~g~~~~g~~~~~y~~DPdG~~iEl~~~~~~  128 (153)
T cd07257          77 DFDAQGLGHDYLREKGYEHVWGVGRHILGSQIFDYWFDPWGFIVEHYTDGDL  128 (153)
T ss_pred             CHHHHHHHHHHHHHCCCcEeecCCccCCCCCEEEEEECCCCCEEEEEcCcee
Confidence            999876   9999999999999988876656788999999999999876543

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>PRK10291 glyoxalase I; Provisional

Probab=99.54  E-value=9.3e-14  Score=114.49  Aligned_cols=102  Identities=43%  Similarity=0.765  Sum_probs=75.5

Q ss_pred             eeeecCHHHHHHHhhhcceEEeeeccCC----CccE----------------EEEEEeCCcccccCCCCeeEEEEEeCCH
Q 018138          249 MLRVGDLDRAINFYKKYTIAVMGYGPED----KNAV----------------LELTYNHGVTEYDKGNGYAQIAIGTDDV  308 (360)
Q Consensus       249 ~L~V~D~e~a~~FY~~~~~~~lG~~~~~----~~~~----------------l~l~~~~~~~~~~~g~g~~hiaf~V~Dl  308 (360)
                      +|.|+|++++++||++    +|||+...    ....                +++..+++...+..+++++|++|.|+|+
T Consensus         1 ~l~V~Dle~s~~FY~~----~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~hlaf~V~d~   76 (129)
T PRK10291          1 MLRVGDLQRSIDFYTN----VLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNA   76 (129)
T ss_pred             CEEecCHHHHHHHHHh----ccCCEEEEeecCCCCcEEEEEEccCCCCCcceEEeeecCCCCCCcCCCCeeEEEEEeCCH
Confidence            4789999999999999    99987421    1111                1121111111223456789999999999


Q ss_pred             HHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCcc
Q 018138          309 YKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  354 (360)
Q Consensus       309 ~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  354 (360)
                      ++++++|+++|+++..++.+.+++..++++|+||||+.|||++..+
T Consensus        77 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~i~DPdG~~iel~~~~~  122 (129)
T PRK10291         77 AEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKD  122 (129)
T ss_pred             HHHHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEEccc
Confidence            9999999999999998776666543467889999999999999764

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=99.54  E-value=1.2e-13  Score=109.58  Aligned_cols=108  Identities=25%  Similarity=0.321  Sum_probs=76.9

Q ss_pred             EEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEECCHHHHHH
Q 018138          120 YRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVD  199 (360)
Q Consensus       120 l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~Dld~~~~  199 (360)
                      |.|+|++++++||+++|||++.....    .+  +.+..+.........+.....  ......+..|++|.|+|++++++
T Consensus         1 l~v~d~~~a~~FY~~~lg~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~v~dv~~~~~   72 (108)
T PF12681_consen    1 LPVSDLEAAAAFYEDVLGFEVVFDDP----DY--VDFSLGFRFHDGVIEFLQFPD--PPGPPGGGFHLCFEVEDVDALYE   72 (108)
T ss_dssp             EEESSHHHHHHHHHHTTTSEEEEEET----SE--EEEEETEEEEEEEEEEEEEES--SSSSSSSEEEEEEEESHHHHHHH
T ss_pred             CccCCHHHHHHHHHHhcCCEEEEeCC----Ce--EEEEeccchhhhhHHHccCCc--cccCCCceeEEEEEEcCHHHHHH
Confidence            67999999999999999999987322    12  334333211011223333221  11234578899999999999999


Q ss_pred             HHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEe
Q 018138          200 LVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  236 (360)
Q Consensus       200 rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~  236 (360)
                      +++++|+++..+|...++|. ..+++.|||||.||++
T Consensus        73 ~l~~~G~~~~~~~~~~~~g~-~~~~~~DPdG~~ie~~  108 (108)
T PF12681_consen   73 RLKELGAEIVTEPRDDPWGQ-RSFYFIDPDGNRIEFC  108 (108)
T ss_dssp             HHHHTTSEEEEEEEEETTSE-EEEEEE-TTS-EEEEE
T ss_pred             HHHHCCCeEeeCCEEcCCCe-EEEEEECCCCCEEEeC
Confidence            99999999988888877764 4699999999999986

...

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=99.54  E-value=4.9e-14  Score=123.27  Aligned_cols=107  Identities=29%  Similarity=0.464  Sum_probs=81.5

Q ss_pred             CCceeceeeecCHHHHHHHhhhcceEEeeeccCC------C-----------------------------ccEEEEEEeC
Q 018138          243 EPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPED------K-----------------------------NAVLELTYNH  287 (360)
Q Consensus       243 ~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~------~-----------------------------~~~l~l~~~~  287 (360)
                      -++.|++|.|.|+++|++||++    +||++...      .                             ...++|.++.
T Consensus        26 ~~~~Ht~i~V~Dle~Si~FY~~----vLG~~~~~r~~~~~~~~~~~fl~~~~~~~~~~~~~~~~~~l~~~~~~lEL~~~~  101 (185)
T PLN03042         26 YIMQQTMFRIKDPKASLDFYSR----VLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTDPPERTVWTFGRKATIELTHNW  101 (185)
T ss_pred             cEEEEEEEeeCCHHHHHHHHHh----hcCCEEEEEEEcCCCceEEEEEecCCcccCCcchhhcccccccCCCEEEEEEcC
Confidence            4799999999999999999998    77775310      0                             1256666544


Q ss_pred             Cccc------ccC----CCCeeEEEEEeCCHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCccc
Q 018138          288 GVTE------YDK----GNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDF  355 (360)
Q Consensus       288 ~~~~------~~~----g~g~~hiaf~V~Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  355 (360)
                      +...      +..    +.|+.|++|.|+|+++++++|+++|+++...|....+  .++++++||||++|||++..+.
T Consensus       102 ~~~~~p~~~~~~~~~~~~~G~~Hlaf~V~Dvd~~~~~L~~~Gv~v~~~p~~~~~--~~~~fi~DPdG~~IEl~e~~~~  177 (185)
T PLN03042        102 GTESDPEFKGYHNGNSDPRGFGHIGITVDDVYKACERFEKLGVEFVKKPDDGKM--KGLAFIKDPDGYWIEIFDLKRI  177 (185)
T ss_pred             CCcccccccccccCCCCCCCccEEEEEcCCHHHHHHHHHHCCCeEEeCCccCCc--eeEEEEECCCCCEEEEEECCCc
Confidence            3221      221    2489999999999999999999999999877653222  5778999999999999997654

>cd08354 Glo_EDI_BRP_like_13 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.54  E-value=2.3e-13  Score=110.25  Aligned_cols=114  Identities=29%  Similarity=0.414  Sum_probs=81.9

Q ss_pred             eEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCC------CCcCCCcceEEE
Q 018138          115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD------KYDIGTGFGHFG  188 (360)
Q Consensus       115 l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~------~~~~g~g~~hi~  188 (360)
                      |.||.|.|.|++++++||+++|||++..+   +++.  .+++..++.   ..+.+.......      ......+..|++
T Consensus         1 ~~~~~l~v~d~~~s~~Fy~~~lG~~~~~~---~~~~--~~~l~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   72 (122)
T cd08354           1 ILETALYVDDLEAAEAFYEDVLGLELMLK---EDRR--LAFFWVGGR---GMLLLFDPGATSTPGGEIPPHGGSGPGHFA   72 (122)
T ss_pred             CeEEEEEeCCHHHHHHHHHhccCCEEeec---CCCc--eEEEEcCCC---cEEEEEecCCcccccCCCCCCCCCCccEEE
Confidence            46899999999999999999999999764   1222  366666543   234444322111      111234788999


Q ss_pred             EEEC--CHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeec
Q 018138          189 IAVE--DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (360)
Q Consensus       189 f~V~--Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~  238 (360)
                      |.++  |++++++++.++|+++...+. ..++++ .+++.||+|+.||++++
T Consensus        73 ~~v~~~dl~~~~~~l~~~g~~~~~~~~-~~~~~~-~~~~~DP~G~~ie~~~~  122 (122)
T cd08354          73 FAIPAEELAEWEAHLEAKGVAIESEVQ-WPRGGR-SLYFRDPDGNLLELATP  122 (122)
T ss_pred             EEcCHHHHHHHHHHHHhcCCceecccc-CCCCee-EEEEECCCCCEEEEecC
Confidence            9994  799999999999999876554 233434 58999999999999863

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07244 FosA FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

Probab=99.54  E-value=1.2e-13  Score=112.46  Aligned_cols=109  Identities=28%  Similarity=0.476  Sum_probs=78.9

Q ss_pred             eeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEE--
Q 018138          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV--  191 (360)
Q Consensus       114 ~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V--  191 (360)
                      +|+||.|.|+|++++.+||+++|||++..+.+  +    .+++..+.  ..+.+.+....     ....+..|++|.+  
T Consensus         1 ~i~hv~l~v~d~~~~~~FY~~vLG~~~~~~~~--~----~~~~~~~~--~~~~l~~~~~~-----~~~~~~~hi~f~v~~   67 (121)
T cd07244           1 GINHITLAVSDLERSVAFYVDLLGFKLHVRWD--K----GAYLEAGD--LWLCLSVDANV-----GPAKDYTHYAFSVSE   67 (121)
T ss_pred             CcceEEEEECCHHHHHHHHHHhcCCEEEEecC--C----ceEEecCC--EEEEEecCCCC-----CCCCCeeeEEEEeCH
Confidence            57899999999999999999999999875432  1    24555432  12233221111     1234678999999  


Q ss_pred             CCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecC
Q 018138          192 EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (360)
Q Consensus       192 ~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~  239 (360)
                      +|+++++++++++|+++..++..  .+  ..+||.|||||.||++...
T Consensus        68 ~dl~~~~~~l~~~G~~~~~~~~~--~~--~~~~f~DPdG~~ie~~~~~  111 (121)
T cd07244          68 EDFASLKEKLRQAGVKEWKENTS--EG--DSFYFLDPDGHKLELHVGS  111 (121)
T ss_pred             HHHHHHHHHHHHcCCcccCCCCC--Cc--cEEEEECCCCCEEEEEeCC
Confidence            47999999999999987654332  22  3699999999999999754

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07243 2_3_CTD_C C-terminal domain of catechol 2,3-dioxygenase

Probab=99.53  E-value=6.4e-14  Score=117.93  Aligned_cols=107  Identities=11%  Similarity=0.147  Sum_probs=79.5

Q ss_pred             CCCceeceeeecCHHHHHHHhhhcceEEeeeccCCC-----c---cEEEEEEeCCcc--ccc--CCCCeeEEEEEeCCHH
Q 018138          242 PEPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK-----N---AVLELTYNHGVT--EYD--KGNGYAQIAIGTDDVY  309 (360)
Q Consensus       242 ~~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~-----~---~~l~l~~~~~~~--~~~--~g~g~~hiaf~V~Dl~  309 (360)
                      +.+++||+|.|+|++++.+||++    +|||+....     .   ....+.......  ...  ++.+++|++|.|+|++
T Consensus         4 ~~~l~Hv~l~v~Dle~s~~FY~~----vLGf~~~~~~~~~~~~~~~~~~l~~~~~~h~~~~~~~~~~~~~Hiaf~v~d~~   79 (143)
T cd07243           4 AHRLDHCLLTGEDIAETTRFFTD----VLDFYLAERVVDPDGGTRVGSFLSCSNKPHDIAFVGGPDGKLHHFSFFLESWE   79 (143)
T ss_pred             CceeCEEEEecCCHHHHHHHHHH----hcCCEEEEEEecCCCCeEEEEEEecCCCcceEEEecCCCCCceEEEEEcCCHH
Confidence            45799999999999999999999    999974211     1   112222111111  111  2457899999999877


Q ss_pred             H---HHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcC
Q 018138          310 K---TAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  352 (360)
Q Consensus       310 ~---~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  352 (360)
                      +   +.++|+++|+++..+|.+++.+.++.+||+|||||.|||...
T Consensus        80 ~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~yf~DPdG~~iEl~~~  125 (143)
T cd07243          80 DVLKAGDIISMNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFAG  125 (143)
T ss_pred             HHHHHHHHHHHcCCceEECCcCCCCCCceEEEEECCCCCEEEEecC
Confidence            6   678999999999888877764446889999999999999764

This subfamily contains the C-terminal, catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the C-terminal domain.

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=99.53  E-value=1.6e-13  Score=116.27  Aligned_cols=110  Identities=42%  Similarity=0.721  Sum_probs=82.7

Q ss_pred             CCCCCceeceeeecCHHHHHHHhhhcceEEeeeccCC----Cc--cE-EEEE-------------EeCCcccccCCCCee
Q 018138          240 PTPEPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPED----KN--AV-LELT-------------YNHGVTEYDKGNGYA  299 (360)
Q Consensus       240 ~~~~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~----~~--~~-l~l~-------------~~~~~~~~~~g~g~~  299 (360)
                      ....++.|+.|.|.|++++.+||++    +|||+...    ..  .. ..+.             .+........+.+..
T Consensus        13 ~~~~~i~hv~l~v~Dl~~a~~FY~~----vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~   88 (150)
T TIGR00068        13 TKKRRLLHTMLRVGDLDKSLDFYTE----VLGMKLLRKRDFPEMKFSLAFLGYGDETSAAVIELTHNWGTEKYDLGNGFG   88 (150)
T ss_pred             cCCceEEEEEEEecCHHHHHHHHHH----hcCCEEEEEeccCCCceEEEEecCCCCCCccEEEEeecCCCCcccCCCcee
Confidence            3467899999999999999999999    99987421    11  01 1111             111111112345789


Q ss_pred             EEEEEeCCHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCc
Q 018138          300 QIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  353 (360)
Q Consensus       300 hiaf~V~Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  353 (360)
                      |++|.|+|+++++++++++|+++..+|.+.+.+..+.+||+||||+.|||++..
T Consensus        89 hi~f~v~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  142 (150)
T TIGR00068        89 HIAIGVDDVYKACERVRALGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQRK  142 (150)
T ss_pred             EEEEecCCHHHHHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEECC
Confidence            999999999999999999999999888766655467899999999999999875

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.53  E-value=9.1e-14  Score=116.28  Aligned_cols=104  Identities=20%  Similarity=0.285  Sum_probs=76.6

Q ss_pred             CCceeceeeecCHHHHHHHhhhcceEEeeeccC-----------------------------CCccEEEEEEeCCccc--
Q 018138          243 EPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPE-----------------------------DKNAVLELTYNHGVTE--  291 (360)
Q Consensus       243 ~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~-----------------------------~~~~~l~l~~~~~~~~--  291 (360)
                      .+++||.|.|+|++++.+||++     |||...                             +....+++.....+..  
T Consensus         2 ~~i~Hi~i~v~Dl~~s~~FY~~-----LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~iel~~~~~~~~~~   76 (142)
T cd08353           2 SRMDNVGIVVRDLEAAIAFFLE-----LGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTPDGHSRLELSKFHHPAVIA   76 (142)
T ss_pred             ceeeeEEEEeCCHHHHHHHHHH-----cCCEEccccccChHHHHHhcCCCCceEEEEEEeCCCCCceEEEEEecCCCCcC
Confidence            3689999999999999999985     455321                             0112334433211111  


Q ss_pred             -----ccCCCCeeEEEEEeCCHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcC
Q 018138          292 -----YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  352 (360)
Q Consensus       292 -----~~~g~g~~hiaf~V~Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  352 (360)
                           ...+.|++|+||.|+|+++++++|+++|+++..++...+.+ .+.+|++||||+.|||+|.
T Consensus        77 ~~~~~~~~~~g~~hia~~v~d~d~~~~~l~~~G~~~~~~~~~~~~~-~r~~~~~DPdG~~iEl~e~  141 (142)
T cd08353          77 DHRPAPVNALGLRRVMFAVDDIDARVARLRKHGAELVGEVVQYENS-YRLCYIRGPEGILIELAEQ  141 (142)
T ss_pred             cCCCCCCCCCCceEEEEEeCCHHHHHHHHHHCCCceeCCceecCCC-eEEEEEECCCCCEEEeeec
Confidence                 11235789999999999999999999999998876555443 6889999999999999984

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.53  E-value=3.5e-13  Score=107.97  Aligned_cols=107  Identities=22%  Similarity=0.279  Sum_probs=80.0

Q ss_pred             EEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEECCHHHHH
Q 018138          119 VYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTV  198 (360)
Q Consensus       119 ~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~Dld~~~  198 (360)
                      .|.|+|++++++||+++|||++...    ..  ...++..+. ..++.+.+.....     .+....|++|.|+|+++++
T Consensus         5 ~l~v~Dl~~s~~FY~~~lG~~~~~~----~~--~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~~i~~~v~d~~~~~   72 (112)
T cd07238           5 NLPVADPEAAAAFYADVLGLDVVMD----HG--WIATFASPQ-NMTVQVSLATEGG-----TATVVPDLSIEVDDVDAAL   72 (112)
T ss_pred             eEecCCHHHHHHHHHHhcCceEEEc----CC--ceEEEeecC-CCCcEEEEecCCC-----CCCCCCEEEEEeCCHHHHH
Confidence            4889999999999999999998642    11  124444332 2234556553321     1223569999999999999


Q ss_pred             HHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeec
Q 018138          199 DLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (360)
Q Consensus       199 ~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~  238 (360)
                      ++|+++|+++..+|....+|.+ .+++.||+||.|++.++
T Consensus        73 ~~l~~~G~~~~~~~~~~~~g~~-~~~~~DP~Gn~i~~~~~  111 (112)
T cd07238          73 ARAVAAGFAIVYGPTDEPWGVR-RFFVRDPFGKLVNILTH  111 (112)
T ss_pred             HHHHhcCCeEecCCccCCCceE-EEEEECCCCCEEEEEEc
Confidence            9999999999888877676654 58999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>PRK11478 putative lyase; Provisional

Probab=99.53  E-value=1.3e-13  Score=113.23  Aligned_cols=104  Identities=18%  Similarity=0.248  Sum_probs=74.9

Q ss_pred             CCceeceeeecCHHHHHHHhhhcceEEeeeccCCC------c-----------cEEEEEEeCCccc---ccCCCCeeEEE
Q 018138          243 EPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK------N-----------AVLELTYNHGVTE---YDKGNGYAQIA  302 (360)
Q Consensus       243 ~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~------~-----------~~l~l~~~~~~~~---~~~g~g~~hia  302 (360)
                      .+++||.|.|+|++++.+||++    +|||+....      .           ..+++........   .....+++|++
T Consensus         5 ~~i~hv~l~v~D~~~a~~FY~~----~LG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~g~~hi~   80 (129)
T PRK11478          5 KQVHHIAIIATDYAVSKAFYCD----ILGFTLQSEVYREARDSWKGDLALNGQYVIELFSFPFPPERPSRPEACGLRHLA   80 (129)
T ss_pred             ceecEEEEEcCCHHHHHHHHHH----HhCCEecccccccccccceeeEecCCCcEEEEEEecCCCCCCCCCCCCceeEEE
Confidence            4689999999999999999999    999875311      0           1111111100000   11234688999


Q ss_pred             EEeCCHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEc
Q 018138          303 IGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD  351 (360)
Q Consensus       303 f~V~Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  351 (360)
                      |.|+|+++++++|+++|+++...+.. +..+.+++||+||||+.|||++
T Consensus        81 f~v~d~~~~~~~l~~~G~~~~~~~~~-~~~g~~~~~~~DPdG~~iEl~~  128 (129)
T PRK11478         81 FSVDDIDAAVAHLESHNVKCEAIRVD-PYTQKRFTFFNDPDGLPLELYE  128 (129)
T ss_pred             EEeCCHHHHHHHHHHcCCeeeccccC-CCCCCEEEEEECCCCCEEEEEe
Confidence            99999999999999999998654322 2223688999999999999987

>cd08357 Glo_EDI_BRP_like_18 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.52  E-value=2e-13  Score=111.17  Aligned_cols=113  Identities=24%  Similarity=0.359  Sum_probs=75.2

Q ss_pred             EEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCC----CC-CcCCCcceEEE--E
Q 018138          117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV----DK-YDIGTGFGHFG--I  189 (360)
Q Consensus       117 HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~----~~-~~~g~g~~hi~--f  189 (360)
                      ||+|.|+|++++++||+++|||++.....    .  ...+..+  +....+.+......    .. .....+..|++  +
T Consensus         2 Hi~l~v~Dl~~s~~FY~~~lG~~~~~~~~----~--~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~h~~~~~   73 (125)
T cd08357           2 HLAIPVRDLEAARAFYGDVLGCKEGRSSE----T--WVDFDFF--GHQLVAHLSPNFNADASDNAVDGHPVPVPHFGLIL   73 (125)
T ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeeccC----C--ccccccc--CcEEEEEeccCCCcccccCCCCCCccCCceEEEEE
Confidence            99999999999999999999999864321    1  1233322  22333443321100    00 01112456765  4


Q ss_pred             EECCHHHHHHHHHHcCCeEecCCeecC---CCCEEEEEEECCCCCEEEEee
Q 018138          190 AVEDVAKTVDLVKAKGGKVTREPGPVK---GGNTVIAFIEDPDGYKFELLE  237 (360)
Q Consensus       190 ~V~Dld~~~~rL~~~G~~~~~~p~~~~---~g~~~~~~~~DPdG~~iEl~~  237 (360)
                      .++|+++++++|+++|+++..+|....   .+..+.+|++|||||.|||..
T Consensus        74 ~~~dv~~~~~~l~~~g~~~~~~p~~~~~~~~~~~~~~~~~DPdG~~iE~~~  124 (125)
T cd08357          74 SEEEFDALAERLEAAGVEFLIEPYTRFEGQPGEQETFFLKDPSGNALEFKA  124 (125)
T ss_pred             eHHHHHHHHHHHHHCCCcEecCcceeccCCcCceeEEEEECCCCCEEEEee
Confidence            568999999999999999987776432   223356999999999999964

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=99.52  E-value=9.4e-14  Score=115.40  Aligned_cols=113  Identities=20%  Similarity=0.261  Sum_probs=84.2

Q ss_pred             CCCceeceeeecCHHHHHHHhhhcceEEeeeccCCC--ccEEEEEEeCCc--c--cc---c-CCCCeeEEEEEeCCHHHH
Q 018138          242 PEPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK--NAVLELTYNHGV--T--EY---D-KGNGYAQIAIGTDDVYKT  311 (360)
Q Consensus       242 ~~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~--~~~l~l~~~~~~--~--~~---~-~g~g~~hiaf~V~Dl~~~  311 (360)
                      |.+++|+.|.|.|++++.+||++    +||++..+.  .....+....+.  .  ..   + ...+++|++|.|+|++++
T Consensus         1 ~~~l~hi~l~v~dl~~s~~FY~~----vlGl~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~g~~hiaf~v~d~~~~   76 (134)
T cd08360           1 PRRLGHVVLFVPDVEAAEAFYRD----RLGFRVSDRFKGRGAFLRAAGGGDHHNLFLIKTPAPMAGFHHAAFEVGDIDEV   76 (134)
T ss_pred             CceeeEEEEEcCCHHHHHHHHHH----hcCCEEEEEecCcEEEEECCCCCCCcEEEEecCCCCCCcceEEEEEeCCHHHH
Confidence            46789999999999999999999    999975432  112222221111  1  01   1 136899999999988766


Q ss_pred             H---HHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCcccccc
Q 018138          312 A---EAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFLKE  358 (360)
Q Consensus       312 ~---~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~  358 (360)
                      .   ++|+++|+++..+|.+++.++.+++||+||+|+.|||......+++
T Consensus        77 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~y~~DP~G~~iEl~~~~~~~~~  126 (134)
T cd08360          77 MLGGNHMLRAGYQTGWGPGRHRIGSNYFWYFRDPWGGEVEYGADMDYVDD  126 (134)
T ss_pred             HHHHHHHHHcCCccccCCCCcCCCccEEEEEECCCCCEEEEEccccccCC
Confidence            5   6999999999888887776656789999999999999987665543

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=99.51  E-value=4.8e-13  Score=105.01  Aligned_cols=112  Identities=33%  Similarity=0.443  Sum_probs=84.5

Q ss_pred             EEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEECCHHH
Q 018138          117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAK  196 (360)
Q Consensus       117 HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~Dld~  196 (360)
                      |+++.|+|++++.+||+++|||++......  .....+++..+    ...+++...........+.+..|++|.|+|+++
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~--~~~~~~~~~~~----~~~i~l~~~~~~~~~~~~~~~~~~~~~v~~~~~   74 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGN--GGAEFAVLGLG----GTRLELFEGDEPAPAPSGGGGVHLAFEVDDVDA   74 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeecc--CCEEEEEEecC----CceEEEecCCCCCCcccCCCeeEEEEECCCHHH
Confidence            889999999999999999999999876432  22345666544    246777665433221235578999999999999


Q ss_pred             HHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEE
Q 018138          197 TVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL  235 (360)
Q Consensus       197 ~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl  235 (360)
                      ++++|+++|+.+..++.....+. ..+++.||+|+.||+
T Consensus        75 ~~~~l~~~g~~~~~~~~~~~~~~-~~~~~~Dp~G~~~~~  112 (112)
T cd06587          75 AYERLKAAGVEVLGEPREEPWGG-RVAYFRDPDGNLIEL  112 (112)
T ss_pred             HHHHHHHcCCcccCCCcCCCCCc-EEEEEECCCCcEEeC
Confidence            99999999999887765233333 469999999999985

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=99.51  E-value=4.6e-13  Score=107.51  Aligned_cols=108  Identities=19%  Similarity=0.265  Sum_probs=74.9

Q ss_pred             ceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEE--E
Q 018138          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGI--A  190 (360)
Q Consensus       113 ~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f--~  190 (360)
                      .+|+||+|.|+|++++++||+ +|||++..+.    +.  ..++..+.  .+..+.+....       ..++.|++|  .
T Consensus         1 ~~i~hv~l~v~d~~~s~~FY~-~lG~~~~~~~----~~--~~~~~~~~--~~~~~~~~~~~-------~~~~~~~~~~~~   64 (112)
T cd08344           1 HSIDHFALEVPDLEVARRFYE-AFGLDVREEG----DG--LELRTAGN--DHRWARLLEGA-------RKRLAYLSFGIF   64 (112)
T ss_pred             CceeEEEEecCCHHHHHHHHH-HhCCcEEeec----Cc--eEEEecCC--CceEEEeecCC-------CCceeeEEEEeE
Confidence            378999999999999999997 6999997542    11  22332222  23344443321       223455444  4


Q ss_pred             ECCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecC
Q 018138          191 VEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (360)
Q Consensus       191 V~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~  239 (360)
                      ++|+++++++|+++|+++..++  ..++.. .+||.||+||.|||....
T Consensus        65 ~~d~~~~~~~l~~~Gi~~~~~~--~~~~~~-~~~~~DP~Gn~iel~~~~  110 (112)
T cd08344          65 EDDFAAFARHLEAAGVALAAAP--PGADPD-GVWFRDPDGNLLQVKVAE  110 (112)
T ss_pred             hhhHHHHHHHHHHcCCceecCC--CcCCCC-EEEEECCCCCEEEEecCC
Confidence            5899999999999999987665  223333 589999999999998654

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08349 BLMA_like Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

Probab=99.51  E-value=6.4e-13  Score=105.86  Aligned_cols=109  Identities=28%  Similarity=0.353  Sum_probs=79.8

Q ss_pred             EEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEECCHHHHH
Q 018138          119 VYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTV  198 (360)
Q Consensus       119 ~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~Dld~~~  198 (360)
                      .|.|+|++++++||+++|||++.....  ...  .+++..+    +..+.+......... ...+..|++|.++|++++.
T Consensus         3 ~i~v~d~~~s~~FY~~~lg~~~~~~~~--~~~--~~~~~~~----~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   73 (112)
T cd08349           3 VLPVSDIERSLAFYRDVLGFEVDWEHP--EPG--YAFLSRG----GAQLMLSEHDGDEPV-PLGRGGSVYIEVEDVDALY   73 (112)
T ss_pred             EEEECCHHHHHHHHHhccCeEEEEEcC--CCc--EEEEEeC----CEEEEEeccCCCCCC-CCCCcEEEEEEeCCHHHHH
Confidence            489999999999999999999976542  122  3455432    245555543322111 2345668999999999999


Q ss_pred             HHHHHcCCe-EecCCeecCCCCEEEEEEECCCCCEEEEee
Q 018138          199 DLVKAKGGK-VTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (360)
Q Consensus       199 ~rL~~~G~~-~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~  237 (360)
                      ++++++|++ +..++....+|.+ .+++.||+|+.||++|
T Consensus        74 ~~l~~~G~~~~~~~~~~~~~g~~-~~~~~DP~G~~ie~~~  112 (112)
T cd08349          74 AELKAKGADLIVYPPEDQPWGMR-EFAVRDPDGNLLRFGE  112 (112)
T ss_pred             HHHHHcCCcceecCccCCCcccE-EEEEECCCCCEEEecC
Confidence            999999999 6666666666644 6899999999999975

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the large

>COG3324 Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

Probab=99.50  E-value=5.5e-13  Score=108.12  Aligned_cols=120  Identities=28%  Similarity=0.406  Sum_probs=87.2

Q ss_pred             ccccccccccccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCC-CCceEEEEEEecCCCCCCc
Q 018138          101 EQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGP-EDSHFVVELTYNYGVDKYD  179 (360)
Q Consensus       101 ~~~~~~~~~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~-~~~~~~lel~~~~~~~~~~  179 (360)
                      ..+.+.|++          |.|.|++++++||+++|||++.+..+..+  ..++.+..+. ...+ .+.-  ...   ..
T Consensus         6 ~~~~i~w~E----------i~~~D~~ra~~FY~~vFgW~~~~~~~~~~--~~y~~f~~~~~~~gG-~l~~--~~~---~~   67 (127)
T COG3324           6 EKGTIVWFE----------LPVSDLERAKAFYEKVFGWTFEDYFDMGE--MRYAVFPADGAGAGG-GLMA--RPG---SP   67 (127)
T ss_pred             cCCccEEEe----------eecCCHHHHHHHHHHhhCceecccccCCC--ceEEEEECCCccccc-eecc--CCc---CC
Confidence            345566666          99999999999999999999986544322  3334443332 2212 1211  111   11


Q ss_pred             CCCcceEEEEEECCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecC
Q 018138          180 IGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (360)
Q Consensus       180 ~g~g~~hi~f~V~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~  239 (360)
                      ++.+...+.|.|+|+++..+|++++|++++.++.+.+++++ ++.+.||+||.|.|++..
T Consensus        68 p~~~~~~iy~~v~did~~l~rv~~~GG~V~~p~~~~p~~G~-~a~~~Dp~Gn~~~l~s~~  126 (127)
T COG3324          68 PGGGGWVIYFAVDDIDATLERVVAAGGKVLRPKTEFPGGGR-IAHFVDPEGNRFGLWSPA  126 (127)
T ss_pred             CCCCCEEEEEecCChHHHHHHHHhcCCeEEecccccCCceE-EEEEECCCCCEEEEeecC
Confidence            22456789999999999999999999999999999987655 699999999999999754

>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.50  E-value=6.5e-13  Score=107.73  Aligned_cols=112  Identities=28%  Similarity=0.463  Sum_probs=79.2

Q ss_pred             EEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEECC--
Q 018138          116 LHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVED--  193 (360)
Q Consensus       116 ~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~D--  193 (360)
                      .|+.|.|+|++++.+||+++||++...+..    .+ ..|. .+..  .+.+.+......    ...++.|++|.|+|  
T Consensus         3 ~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~----~~-~~~~-~~~~--~~~~~~~~~~~~----~~~~~~h~~f~v~~~~   70 (120)
T cd07254           3 FHVALNVDDLEASIAFYSKLFGVEPTKVRD----DY-AKFL-LEDP--RLNFVLNERPGA----PGGGLNHLGVQVDSAE   70 (120)
T ss_pred             EEEEEEeCCHHHHHHHHHHHhCCeEecccC----Ce-eEEE-ecCC--ceEEEEecCCCC----CCCCeeEEEEEeCCHH
Confidence            599999999999999999999999865421    11 2332 2222  334444332211    11478999999987  


Q ss_pred             -HHHHHHHHHHcCCeEecCCeecCC-CCEEEEEEECCCCCEEEEeecC
Q 018138          194 -VAKTVDLVKAKGGKVTREPGPVKG-GNTVIAFIEDPDGYKFELLERG  239 (360)
Q Consensus       194 -ld~~~~rL~~~G~~~~~~p~~~~~-g~~~~~~~~DPdG~~iEl~~~~  239 (360)
                       ++++++++.++|+++..+|..... +....+|++||+||.|||+...
T Consensus        71 dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  118 (120)
T cd07254          71 EVAEAKARAEAAGLPTFKEEDTTCCYAVQDKVWVTDPDGNAWEVFVTL  118 (120)
T ss_pred             HHHHHHHHHHHcCCeEEccCCcccccCCcceEEEECCCCCEEEEEEee
Confidence             888999999999998876543321 2224699999999999999754

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=99.50  E-value=2.7e-13  Score=109.66  Aligned_cols=100  Identities=33%  Similarity=0.606  Sum_probs=75.1

Q ss_pred             ceeceeeecCHHHHHHHhhhcceEEeeeccCC----C--cc-EEEEEEeC-------------Cc-ccccCCCCeeEEEE
Q 018138          245 LCQVMLRVGDLDRAINFYKKYTIAVMGYGPED----K--NA-VLELTYNH-------------GV-TEYDKGNGYAQIAI  303 (360)
Q Consensus       245 i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~----~--~~-~l~l~~~~-------------~~-~~~~~g~g~~hiaf  303 (360)
                      +.|+.|.|+|++++.+||++    +|||+...    .  .. ...+....             .. .....+.+.+|++|
T Consensus         1 ~~hv~i~v~d~~~a~~fY~~----~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~   76 (121)
T cd07233           1 FLHTMLRVKDLEKSLDFYTD----VLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWGTEEPYDNGNGFGHLAF   76 (121)
T ss_pred             CeeEEEEecCcHHHHHHHHh----ccCCeEEEEEecCCCceEEEEecCCCCCCccEEEEEecCCCCCCcCCCCCeEEEEE
Confidence            57999999999999999999    99986421    1  01 11121111             10 11123457889999


Q ss_pred             EeCCHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEE
Q 018138          304 GTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFV  350 (360)
Q Consensus       304 ~V~Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~  350 (360)
                      .|+|+++++++++++|+++..+|...+  .++++||+||||++|||+
T Consensus        77 ~v~did~~~~~l~~~G~~~~~~~~~~~--~~~~~~~~DpdG~~iE~~  121 (121)
T cd07233          77 AVDDVYAACERLEEMGVEVTKPPGDGG--MKGIAFIKDPDGYWIELI  121 (121)
T ss_pred             EeCCHHHHHHHHHHCCCEEeeCCccCC--CceEEEEECCCCCEEEeC
Confidence            999999999999999999999887663  368899999999999985

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=99.50  E-value=1.8e-13  Score=117.66  Aligned_cols=108  Identities=23%  Similarity=0.237  Sum_probs=75.3

Q ss_pred             CCceeceeeecCHHHHHHHhhhcceEEeeeccC-------C--C--------------------------ccEEEEEEeC
Q 018138          243 EPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPE-------D--K--------------------------NAVLELTYNH  287 (360)
Q Consensus       243 ~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~-------~--~--------------------------~~~l~l~~~~  287 (360)
                      .+++||.|.|+|+++|++||++    +||++..       .  .                          ...+++....
T Consensus         3 ~~i~Hv~i~V~Dle~s~~FY~~----~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ieL~~~~   78 (162)
T TIGR03645         3 RTFSHIGISVPDLDAAVKFYTE----VLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGDRIGVELFEFK   78 (162)
T ss_pred             ceEEEEEEEeCCHHHHHHHHHH----hcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCCCCcEEEEecc
Confidence            5789999999999999999999    8887431       0  0                          0112222211


Q ss_pred             Cccc-c----cCCCCeeEEEEEeCCHHHHHHHHHHcCCeEeeCCccc--CCC-CcEEEEEECCCCCeEEEEcCcc
Q 018138          288 GVTE-Y----DKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPL--PGI-NTKITACLDPDGWKSVFVDNLD  354 (360)
Q Consensus       288 ~~~~-~----~~g~g~~hiaf~V~Dl~~~~~~l~~~G~~i~~~p~~~--~~~-~~~~~~~~DPdG~~iel~~~~~  354 (360)
                      +... .    ..+.|+.|++|.|+|+++++++++++|+++..++...  ++. ..+.+|++||||+.|||++..+
T Consensus        79 ~~~~~~~~~~~~~~g~~Hla~~v~dida~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~  153 (162)
T TIGR03645        79 NQENPEDNFEYWKTGVFHFCVQDPDVEGLAERIVAAGGKKRMPVPRYYYPGEKPYRMIYMEDPFGNILEIYSHSY  153 (162)
T ss_pred             CCCCCCcccccccccceEEEEEcCCHHHHHHHHHHcCCcccCCCccccCCCCCceEEEEEECCCCCEEEEEEcCh
Confidence            1110 0    1135789999999999999999999999865533211  211 2378999999999999999753

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=99.49  E-value=2.5e-13  Score=110.59  Aligned_cols=107  Identities=19%  Similarity=0.170  Sum_probs=78.8

Q ss_pred             CCceeceeeecCHHHHHHHhhhcceEEeeeccCCCc--cEEEEEEeC--Ccc--cc--cCCCCeeEEEEEeC---CHHHH
Q 018138          243 EPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDKN--AVLELTYNH--GVT--EY--DKGNGYAQIAIGTD---DVYKT  311 (360)
Q Consensus       243 ~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~~--~~l~l~~~~--~~~--~~--~~g~g~~hiaf~V~---Dl~~~  311 (360)
                      .+++|+.|.|+|++++.+||++    +|||+.....  ....+....  +..  ..  ....++.|++|.|+   |++++
T Consensus         3 ~~l~hv~l~v~Dl~~s~~FY~~----~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~hiaf~v~~~~dv~~~   78 (122)
T cd07265           3 LRPGHVQLRVLDLEEAIKHYRE----VLGLDEVGRDDQGRVYLKAWDEFDHHSIVLREADTAGLDFMGFKVLDDADLEKL   78 (122)
T ss_pred             ceEeEEEEEeCCHHHHHHHHHh----ccCCEeeeecCCceEEEEccCCCcccEEEeccCCCCCeeEEEEEeCCHHHHHHH
Confidence            5789999999999999999999    9999754321  122222211  111  11  22357899999996   78999


Q ss_pred             HHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCc
Q 018138          312 AEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  353 (360)
Q Consensus       312 ~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  353 (360)
                      +++++++|+++...|.....+.++.+||+|||||.||+....
T Consensus        79 ~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~  120 (122)
T cd07265          79 EARLQAYGVAVERIPAGELPGVGRRVRFQLPSGHTMELYADK  120 (122)
T ss_pred             HHHHHHCCCcEEEcccCCCCCCceEEEEECCCCCEEEEEEec
Confidence            999999999998766544333367899999999999998754

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=99.49  E-value=6.4e-13  Score=108.00  Aligned_cols=113  Identities=19%  Similarity=0.197  Sum_probs=77.5

Q ss_pred             eEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecC-----CCCCCcCCCcceEEEE
Q 018138          115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY-----GVDKYDIGTGFGHFGI  189 (360)
Q Consensus       115 l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~-----~~~~~~~g~g~~hi~f  189 (360)
                      |+||+|.|+|++++++||+. |||++......  .  ..+.+..+.+   ..+.+....     .......+.+..|++|
T Consensus         1 ~~~i~l~V~D~~~a~~FY~~-LGf~~~~~~~~--~--~~~~~~~~~~---~~l~l~~~~~~~~~~~~~~~~~~~~~~l~~   72 (122)
T cd07235           1 LDAVGIVVADMAKSLDFYRR-LGFDFPEEADD--E--PHVEAVLPGG---VRLAWDTVESIRSFTPGWTPTGGHRIALAF   72 (122)
T ss_pred             CceEEEEeccHHHHHHHHHH-hCceecCCcCC--C--CcEEEEeCCC---EEEEEEcccceeeecCCCCCCCCCcEEEEE
Confidence            57999999999999999975 99998643221  1  1233433321   223222110     0000112234568888


Q ss_pred             EEC---CHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEe
Q 018138          190 AVE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  236 (360)
Q Consensus       190 ~V~---Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~  236 (360)
                      .+.   |+++++++|+++|+++..+|...++|.+ .++++|||||.|||+
T Consensus        73 ~~~~~~dvd~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~  121 (122)
T cd07235          73 LCETPAEVDALYAELVGAGYPGHKEPWDAPWGQR-YAIVKDPDGNLVDLF  121 (122)
T ss_pred             EcCCHHHHHHHHHHHHHCCCCcCCCCccCCCCCE-EEEEECCCCCEEEEe
Confidence            875   7999999999999998888887777765 589999999999996

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>cd09011 Glo_EDI_BRP_like_23 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.49  E-value=2.5e-13  Score=110.30  Aligned_cols=104  Identities=13%  Similarity=0.154  Sum_probs=76.9

Q ss_pred             CceeceeeecCHHHHHHHhhhcceEEeeeccCCC-ccEEEEE------E--eCC----cccccCCCCeeEEEEEeCCHHH
Q 018138          244 PLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK-NAVLELT------Y--NHG----VTEYDKGNGYAQIAIGTDDVYK  310 (360)
Q Consensus       244 ~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~-~~~l~l~------~--~~~----~~~~~~g~g~~hiaf~V~Dl~~  310 (360)
                      ++.++.|.|+|++++.+||++    +||++.... .....+.      .  ...    ......+.+..|++|.|+|+++
T Consensus         2 ~~~~~~l~v~D~~~a~~FY~~----~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~v~dvd~   77 (120)
T cd09011           2 KFKNPLLVVKDIEKSKKFYEK----VLGLKVVMDFGENVTFEGGFALQEGYSWLEGISKADIIEKSNNFELYFEEEDFDA   77 (120)
T ss_pred             EEEEEEEEECCHHHHHHHHHH----hcCCEEeeccCceEEEeccceeccchhhhccCCcccccccCCceEEEEEehhhHH
Confidence            467899999999999999999    999875321 1111110      0  000    0011223456799999999999


Q ss_pred             HHHHHHHcCC-eEeeCCcccCCCCcEEEEEECCCCCeEEEEcC
Q 018138          311 TAEAIKLSGG-KITREPGPLPGINTKITACLDPDGWKSVFVDN  352 (360)
Q Consensus       311 ~~~~l~~~G~-~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  352 (360)
                      ++++|+++|+ ++..+|...+++ .+.++|+|||||.|||.+.
T Consensus        78 ~~~~l~~~g~~~~~~~~~~~~~g-~r~~~~~DPdGn~iei~~~  119 (120)
T cd09011          78 FLDKLKRYDNIEYVHPIKEHPWG-QRVVRFYDPDKHIIEVGES  119 (120)
T ss_pred             HHHHHHhcCCcEEecCcccCCCc-cEEEEEECCCCCEEEEecc
Confidence            9999999986 788888877765 6899999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=99.49  E-value=4.3e-13  Score=107.63  Aligned_cols=102  Identities=24%  Similarity=0.310  Sum_probs=77.9

Q ss_pred             ceeceeeecCHHHHHHHhhhcceEEeeeccCCCc----cEEEEEEeCCc-cc---c----cCCCCeeEEEEEeCCHHHHH
Q 018138          245 LCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDKN----AVLELTYNHGV-TE---Y----DKGNGYAQIAIGTDDVYKTA  312 (360)
Q Consensus       245 i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~~----~~l~l~~~~~~-~~---~----~~g~g~~hiaf~V~Dl~~~~  312 (360)
                      +.|+.|.|+|++++++||++    +||++.....    ....+...... ..   .    .......|++|.|+|+++++
T Consensus         1 ~~hi~l~v~d~~~s~~FY~~----~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~v~di~~~~   76 (114)
T cd07247           1 PVWFELPTTDPERAKAFYGA----VFGWTFEDMGDGGGDYAVFSTGGGAVGGLMKAPEPAAGSPPGWLVYFAVDDVDAAA   76 (114)
T ss_pred             CEEEEeeCCCHHHHHHHHHh----ccCceeeeccCCCCceEEEEeCCccEEEEecCCCCCCCCCCeEEEEEEeCCHHHHH
Confidence            46999999999999999999    9998753322    12222221100 00   1    12346789999999999999


Q ss_pred             HHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEc
Q 018138          313 EAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD  351 (360)
Q Consensus       313 ~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  351 (360)
                      ++++++|+++..+|...+++ ++.++++|||||.|+|++
T Consensus        77 ~~l~~~g~~~~~~~~~~~~~-~~~~~~~DPdG~~~~l~~  114 (114)
T cd07247          77 ARVEAAGGKVLVPPTDIPGV-GRFAVFADPEGAVFGLWQ  114 (114)
T ss_pred             HHHHHCCCEEEeCCcccCCc-EEEEEEECCCCCEEEeEC
Confidence            99999999999998877644 689999999999999975

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.48  E-value=3.8e-13  Score=114.62  Aligned_cols=113  Identities=17%  Similarity=0.180  Sum_probs=84.4

Q ss_pred             CCCceeceeeecCHHHHHHHhhhcceEEeeeccCCC---------c-cEEEEEEeCCcc--c---ccCCCCeeEEEEEeC
Q 018138          242 PEPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK---------N-AVLELTYNHGVT--E---YDKGNGYAQIAIGTD  306 (360)
Q Consensus       242 ~~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~---------~-~~l~l~~~~~~~--~---~~~g~g~~hiaf~V~  306 (360)
                      +.+++|+.|.|+|++++.+||++    +||++....         . ....+..+....  .   ...+.+++|++|.|+
T Consensus         7 ~~~l~Hi~l~v~Dl~~a~~FY~~----~LGl~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~g~~Hiaf~V~   82 (154)
T cd07237           7 DQGLGHVVLATPDPDEAHAFYRD----VLGFRLSDEIDIPLPPGPTARVTFLHCNGRHHSLALAEGPGPKRIHHLMLEVT   82 (154)
T ss_pred             CCccCEEEEEeCCHHHHHHHHHH----ccCCEEEEEEcccCCCCCcceEEEEEeCCCCCCEEEEcCCCCceeEEEEEEcC
Confidence            56899999999999999999999    999874211         1 112222221111  1   112368999999997


Q ss_pred             CHH---HHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCcccccc
Q 018138          307 DVY---KTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFLKE  358 (360)
Q Consensus       307 Dl~---~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~  358 (360)
                      |++   +++++|+++|+++..++..++.+..+.+|++||+|+.|||.....-++|
T Consensus        83 d~~~l~~~~~~L~~~G~~v~~~~~~~~~~~~~~~y~~DPdG~~iEl~~~~~~~~~  137 (154)
T cd07237          83 SLDDVGRAYDRVRARGIPIAMTLGRHTNDRMLSFYVRTPSGFAIEYGWGGRTVDD  137 (154)
T ss_pred             CHHHHHHHHHHHHHcCCceeccCCccCCCCcEEEEEECCCCcEEEeccCceEccC
Confidence            654   6899999999999988887776557889999999999999887655543

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.48  E-value=4e-13  Score=108.89  Aligned_cols=104  Identities=19%  Similarity=0.341  Sum_probs=75.9

Q ss_pred             CCceeceeeecCHHHHHHHhhhcceEEeeeccCCC------cc-EEEEEEeCCc-----------c--cccCCCCeeEEE
Q 018138          243 EPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK------NA-VLELTYNHGV-----------T--EYDKGNGYAQIA  302 (360)
Q Consensus       243 ~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~------~~-~l~l~~~~~~-----------~--~~~~g~g~~hia  302 (360)
                      .+++|+.|.|.|++++.+||++    +|||.....      .. .+.+....+.           .  ..+.+.+++|++
T Consensus         2 ~~~~hi~l~v~d~~~a~~fy~~----~lG~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~g~~h~~   77 (125)
T cd08352           2 FGIHHVAIICSDYEKSKEFYVE----ILGFKVIREVYRPERGSYKLDLLLNGGYQLELFSFPNPPERPSYPEACGLRHLA   77 (125)
T ss_pred             CccceEEEEcCCHHHHHHHHHH----hcCCEEeeeeecCCCCcEEEEEecCCCcEEEEEEcCCCCCCCCCCcCCCceEEE
Confidence            3689999999999999999999    999875311      01 1111111110           0  011235789999


Q ss_pred             EEeCCHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEc
Q 018138          303 IGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD  351 (360)
Q Consensus       303 f~V~Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  351 (360)
                      |.|+|+++++++++++|+++...+..... +.+.+|++||+|+.|||+|
T Consensus        78 ~~v~d~~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~~DP~G~~iEl~~  125 (125)
T cd08352          78 FSVEDIEAAVKHLKAKGVEVEPIRVDEFT-GKRFTFFYDPDGLPLELYE  125 (125)
T ss_pred             EEeCCHHHHHHHHHHcCCccccccccCCC-ceEEEEEECCCCCEEEecC
Confidence            99999999999999999998876543333 2578999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07261 Glo_EDI_BRP_like_11 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.48  E-value=1.2e-12  Score=105.14  Aligned_cols=108  Identities=26%  Similarity=0.349  Sum_probs=79.7

Q ss_pred             EEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCC-CcCCCcceEEEEEECC---
Q 018138          118 VVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK-YDIGTGFGHFGIAVED---  193 (360)
Q Consensus       118 V~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~-~~~g~g~~hi~f~V~D---  193 (360)
                      +.|.|+|++++++||+++|||++....    ..+  +.+..++   ...+.+........ .....+..|++|.+++   
T Consensus         2 ~~l~v~d~~~a~~FY~~~lg~~~~~~~----~~~--~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~~   72 (114)
T cd07261           2 VLLYVEDPAASAEFYSELLGREPVELS----PTF--ALFVLGS---GVKLGLWSRHTVEPASDATGGGSELAFMVDDGAA   72 (114)
T ss_pred             EEEEECCHHHHHHHHHHHcCCCccCCC----Cce--EEEEeCC---CcEEEEeeccccCCCCCCCCCceEEEEEcCCHHH
Confidence            569999999999999999999987431    222  3333322   23566655433211 1123467899999985   


Q ss_pred             HHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEe
Q 018138          194 VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  236 (360)
Q Consensus       194 ld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~  236 (360)
                      +++++++++++|+++..+|...++|.  .++|+|||||.||++
T Consensus        73 ~~~~~~~~~~~g~~v~~~~~~~~~g~--~~~~~DPdGn~ie~~  113 (114)
T cd07261          73 VDALYAEWQAKGVKIIQEPTEMDFGY--TFVALDPDGHRLRVF  113 (114)
T ss_pred             HHHHHHHHHHCCCeEecCccccCCcc--EEEEECCCCCEEEee
Confidence            88999999999999998888777764  589999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=99.48  E-value=5.4e-13  Score=106.88  Aligned_cols=95  Identities=27%  Similarity=0.336  Sum_probs=78.7

Q ss_pred             EEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCC--cCCCcceEEEEEECC
Q 018138          116 LHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKY--DIGTGFGHFGIAVED  193 (360)
Q Consensus       116 ~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~--~~g~g~~hi~f~V~D  193 (360)
                      +||+|.|+|++++++||+++||++.......+..+.+..++..+++.  ..+||.++......  ..+.|++||||.|+|
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~~~--~~iELi~p~~~~~~~~~~~~gi~Hia~~v~D   78 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGDGP--VQIELIQPLDGDSPLDRGGGGIHHIAFEVDD   78 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETTET--EEEEEEEESSTTCHHHHTSSEEEEEEEEESH
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCCCc--EEEEEEEeCCCCcccccCCCCEEEEEEEeCC
Confidence            69999999999999999999999988776666777888888876532  67999886554321  267799999999999


Q ss_pred             HHHHHHHHHHcCCeEecCC
Q 018138          194 VAKTVDLVKAKGGKVTREP  212 (360)
Q Consensus       194 ld~~~~rL~~~G~~~~~~p  212 (360)
                      ++++.++|+++|+++...+
T Consensus        79 ~d~~~~~l~~~G~~~~~~~   97 (109)
T PF13669_consen   79 LDAAIARLEAQGFRVLDEG   97 (109)
T ss_dssp             HHHHHHHHHHTTECEEECE
T ss_pred             HHHHHHHHHHCCCEEcccC
Confidence            9999999999999987664

>PRK06724 hypothetical protein; Provisional

Probab=99.47  E-value=3.9e-13  Score=110.97  Aligned_cols=105  Identities=18%  Similarity=0.217  Sum_probs=75.8

Q ss_pred             CCceeceeeecCHHHHHHHhhhcceEEe---eeccC------CCccEEEEEEeCCcccccCCCCeeEEEEEe---CCHHH
Q 018138          243 EPLCQVMLRVGDLDRAINFYKKYTIAVM---GYGPE------DKNAVLELTYNHGVTEYDKGNGYAQIAIGT---DDVYK  310 (360)
Q Consensus       243 ~~i~hv~L~V~D~e~a~~FY~~~~~~~l---G~~~~------~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V---~Dl~~  310 (360)
                      .+++||.|.|+|+++|++||++    +|   ||+..      .....+.+....+  ......+..|+||.|   +|+++
T Consensus         6 ~~i~Hv~l~V~Dle~s~~FY~~----vlg~lg~~~~~~~~~~~g~~~l~l~~~~~--~~~~~~g~~h~af~v~~~~dvd~   79 (128)
T PRK06724          6 AGIHHIEFWVANLEESISFYDM----LFSIIGWRKLNEVAYSTGESEIYFKEVDE--EIVRTLGPRHICYQAINRKVVDE   79 (128)
T ss_pred             cccCEEEEEeCCHHHHHHHHHH----HHhhCCcEEeeeEeeeCCCeeEEEecCCc--cccCCCCceeEEEecCChHHHHH
Confidence            4799999999999999999998    55   55432      1111222211111  012235788999998   78999


Q ss_pred             HHHHHHHcCCeEeeCCcccCC--CCcEEEEEECCCCCeEEEEcCc
Q 018138          311 TAEAIKLSGGKITREPGPLPG--INTKITACLDPDGWKSVFVDNL  353 (360)
Q Consensus       311 ~~~~l~~~G~~i~~~p~~~~~--~~~~~~~~~DPdG~~iel~~~~  353 (360)
                      ++++++++|+++..+|...+.  .+.+.+||+|||||.|||+...
T Consensus        80 ~~~~l~~~G~~~~~~p~~~~~~~~g~~~~~f~DPdG~~iEl~~~~  124 (128)
T PRK06724         80 VAEFLSSTKIKIIRGPMEMNHYSEGYYTIDFYDPNGFIIEVAYTP  124 (128)
T ss_pred             HHHHHHHCCCEEecCCcccCCCCCCEEEEEEECCCCCEEEEEeCC
Confidence            999999999999888865442  3247899999999999998653

>cd07258 PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.47  E-value=5e-13  Score=112.25  Aligned_cols=109  Identities=16%  Similarity=0.237  Sum_probs=82.3

Q ss_pred             eeceeeecCHHHHHHHhhhcceEEeeeccCCC--ccEEEEEEeCCc--c--cc--cCCCCeeEEEEEeCC---HHHHHHH
Q 018138          246 CQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK--NAVLELTYNHGV--T--EY--DKGNGYAQIAIGTDD---VYKTAEA  314 (360)
Q Consensus       246 ~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~--~~~l~l~~~~~~--~--~~--~~g~g~~hiaf~V~D---l~~~~~~  314 (360)
                      +||.|.|+|++++.+||++    +||++..+.  .....+......  .  ..  ....+++|++|.|+|   +++++++
T Consensus         1 ~Hv~l~V~Dle~s~~Fy~~----vLG~~~~~~~~~~~~~l~~~~~~~~h~~~~~~~~~~gl~Hiaf~v~~~~~v~~~~~~   76 (141)
T cd07258           1 GHVVIGSENFEASRDSLVE----DFGFRVSDLIEDRIVFMRCHPNPFHHTFAVGPASSSHFHHVNFMVTDIDDIGKALYR   76 (141)
T ss_pred             CcEEEecCCHHHHHHHHHh----cCCCEeeeeeCCEEEEEEcCCCCCcceeeeccCCCCceEEEEEECCCHHHHHHHHHH
Confidence            5899999999999999999    999986432  122333321111  1  11  123589999999975   5678999


Q ss_pred             HHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCcccccc
Q 018138          315 IKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFLKE  358 (360)
Q Consensus       315 l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~  358 (360)
                      |+++|+++..+|++++.+..+.+||+||+|+.|||.-..+...|
T Consensus        77 l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~~~~~~  120 (141)
T cd07258          77 IKAHDVKVVFGPGRHPPSDSIFFYFLDPDGITVEYSFGMEEFAE  120 (141)
T ss_pred             HHHCCCcEEeCCceECCCCCEEEEEECCCCCEEEEEeCcceecc
Confidence            99999999999988886667889999999999999876654443

This subfamily contains the C-terminal, catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as for other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=99.46  E-value=5.3e-13  Score=111.63  Aligned_cols=106  Identities=22%  Similarity=0.274  Sum_probs=78.8

Q ss_pred             CCceeceeeecCHHHHHHHhhhcceEEeeeccCCCc----------cEEEEEEeCCcccccCCCCeeEEEEEeC--CHHH
Q 018138          243 EPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDKN----------AVLELTYNHGVTEYDKGNGYAQIAIGTD--DVYK  310 (360)
Q Consensus       243 ~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~~----------~~l~l~~~~~~~~~~~g~g~~hiaf~V~--Dl~~  310 (360)
                      .++.|+.|.|+|++++.+||++    +||++.....          ..+.+...........+.+++|++|.++  |+++
T Consensus         3 ~~i~hi~L~v~Dl~~s~~FY~~----~lG~~~~~~~~~~~~~~~~g~~l~l~~~~~~~~~~~~~~~~hiaf~v~~~dv~~   78 (139)
T PRK04101          3 KGINHICFSVSNLEKSIEFYEK----VLGAKLLVKGRKTAYFDLNGLWIALNEEKDIPRNEIHQSYTHIAFSIEEEDFDH   78 (139)
T ss_pred             CcEEEEEEEecCHHHHHHHHHh----ccCCEEEeecCeeEEEecCCeEEEeeccCCCCCccCCCCeeEEEEEecHHHHHH
Confidence            4689999999999999999999    9999754211          1111111100000112346789999997  9999


Q ss_pred             HHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCc
Q 018138          311 TAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  353 (360)
Q Consensus       311 ~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  353 (360)
                      ++++++++|+++..+|...+.+ ++.+||+|||||.|||.+..
T Consensus        79 ~~~~l~~~G~~i~~~~~~~~~~-~~~~~~~DPdGn~iEl~~~~  120 (139)
T PRK04101         79 WYQRLKENDVNILPGRERDERD-KKSIYFTDPDGHKFEFHTGT  120 (139)
T ss_pred             HHHHHHHCCceEcCCccccCCC-ceEEEEECCCCCEEEEEeCC
Confidence            9999999999998877666554 68999999999999998764

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.46  E-value=4.7e-13  Score=108.68  Aligned_cols=102  Identities=25%  Similarity=0.338  Sum_probs=72.6

Q ss_pred             CceeceeeecCHHHHHHHhhhcceEEeeeccCCC------c-----------cEEEEEEeCCcccc---cCCCCeeEEEE
Q 018138          244 PLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK------N-----------AVLELTYNHGVTEY---DKGNGYAQIAI  303 (360)
Q Consensus       244 ~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~------~-----------~~l~l~~~~~~~~~---~~g~g~~hiaf  303 (360)
                      +++|+.|.|+|++++.+||++    +||++....      .           ..+++.........   ....|+.|++|
T Consensus         1 ~~~Hi~l~v~dl~~s~~FY~~----~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~hi~f   76 (125)
T cd07241           1 KIEHVAIWTKDLERMKAFYVT----YFGATSNEKYHNPRKGFESYFLSFDDGARLELMTRPDIAPSPNEGERTGWAHLAF   76 (125)
T ss_pred             CceEEEEEecCHHHHHHHHHH----HhCCEeeceEeCCCCCceEEEEecCCCcEEEEEcCcccCCCcccCCCCceEEEEE
Confidence            478999999999999999999    999874211      0           11122111111111   12247899999


Q ss_pred             EeC---CHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEE
Q 018138          304 GTD---DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFV  350 (360)
Q Consensus       304 ~V~---Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~  350 (360)
                      .|+   |+++++++|+++|+++..+|...+.+ .+.++++|||||.|||.
T Consensus        77 ~v~~~~~v~~~~~~l~~~g~~~~~~~~~~~~g-~~~~~~~DPdG~~iE~~  125 (125)
T cd07241          77 SVGSKEAVDELTERLRADGYLIIGEPRTTGDG-YYESVILDPEGNRIEIT  125 (125)
T ss_pred             ECCCHHHHHHHHHHHHHCCCEEEeCceecCCC-eEEEEEECCCCCEEEeC
Confidence            995   58999999999999999877544432 45678999999999984

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins

Probab=99.46  E-value=1.5e-12  Score=105.73  Aligned_cols=107  Identities=22%  Similarity=0.194  Sum_probs=75.8

Q ss_pred             EEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEECCHHHH
Q 018138          118 VVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKT  197 (360)
Q Consensus       118 V~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~Dld~~  197 (360)
                      ..|.|+|++++++||++ |||++..+...   .  .+++..++    ..+.+.......   ......|++|.|+|++++
T Consensus         6 ~~l~v~Dl~~s~~FY~~-lG~~~~~~~~~---~--~~~~~~~~----~~l~l~~~~~~~---~~~~~~~~~~~v~dvd~~   72 (120)
T cd08350           6 PNLPSRDLDATEAFYAR-LGFSVGYRQAA---G--YMILRRGD----LELHFFAHPDLD---PATSPFGCCLRLPDVAAL   72 (120)
T ss_pred             ceeEcCCHHHHHHHHHH-cCCEEEecCCC---C--EEEEEcCC----EEEEEEecCcCC---CCCCcceEEEEeCCHHHH
Confidence            35899999999999999 99999754321   2  34454332    356665532211   122345799999999999


Q ss_pred             HHHHHHcCCeEe-------cCCeecCCCCEEEEEEECCCCCEEEEeec
Q 018138          198 VDLVKAKGGKVT-------REPGPVKGGNTVIAFIEDPDGYKFELLER  238 (360)
Q Consensus       198 ~~rL~~~G~~~~-------~~p~~~~~g~~~~~~~~DPdG~~iEl~~~  238 (360)
                      +++|+++|+++.       .++...++|.+ .++|+|||||.|||++.
T Consensus        73 ~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~-~~~~~DPdG~~ie~~~~  119 (120)
T cd08350          73 HAEFRAAGLPETGSGIPRITPPEDQPWGMR-EFALVDPDGNLLRFGQP  119 (120)
T ss_pred             HHHHHHhCccccccCCCcccCCcCCCCcee-EEEEECCCCCEEEeecC
Confidence            999999999843       33343445644 69999999999999874

BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.45  E-value=1.1e-12  Score=107.27  Aligned_cols=112  Identities=23%  Similarity=0.217  Sum_probs=76.9

Q ss_pred             EEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCC------CCC-cCCCcceEEE
Q 018138          116 LHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV------DKY-DIGTGFGHFG  188 (360)
Q Consensus       116 ~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~------~~~-~~g~g~~hi~  188 (360)
                      .+|.|.|+|++++++||++ |||++..+...  ..  ..++..++   ...+.+......      ... ..+.+..|++
T Consensus         2 ~~v~l~V~Dl~~s~~FY~~-lGf~~~~~~~~--~~--~~~~~~~~---~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~l~   73 (124)
T cd09012           2 IFINLPVKDLEKSTAFYTA-LGFEFNPQFSD--EK--AACMVISD---NIFVMLLTEDFFQTFTPKPIADTKKSTEVLIS   73 (124)
T ss_pred             EEEEeecCCHHHHHHHHHH-CCCEEccccCC--CC--eEEEEECC---ceEEEEEcHHHHhhccCCCcccCCCCCeEEEE
Confidence            5788999999999999987 99998643221  11  13333332   234555432110      000 1233456999


Q ss_pred             EEEC---CHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEee
Q 018138          189 IAVE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (360)
Q Consensus       189 f~V~---Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~  237 (360)
                      |.|+   |+++++++++++|+++..+|...+++  +.+||+|||||.||++.
T Consensus        74 f~v~~~~~vd~~~~~l~~~G~~i~~~p~~~~~~--~~~~~~DPdG~~ie~~~  123 (124)
T cd09012          74 LSADSREEVDELVEKALAAGGKEFREPQDHGFM--YGRSFADLDGHLWEVLW  123 (124)
T ss_pred             EeCCCHHHHHHHHHHHHHCCCcccCCcccCCce--EEEEEECCCCCEEEEEE
Confidence            9998   58899999999999998887766543  35899999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.44  E-value=8.5e-13  Score=108.44  Aligned_cols=94  Identities=27%  Similarity=0.490  Sum_probs=71.7

Q ss_pred             CceeceeeecCHHHHHHHhhhcceEEeeeccC-------------------------------CCccEEEEEEeCCcccc
Q 018138          244 PLCQVMLRVGDLDRAINFYKKYTIAVMGYGPE-------------------------------DKNAVLELTYNHGVTEY  292 (360)
Q Consensus       244 ~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~-------------------------------~~~~~l~l~~~~~~~~~  292 (360)
                      ++.|++|+|+|+++|++||++    +||++..                               .....++|+++++..++
T Consensus         2 ~~~Hv~irV~DlerSi~FY~~----vLG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~lEL~~n~~~~~~   77 (127)
T cd08358           2 RALHFVFKVGNRNKTIKFYRE----VLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPEDDHFVVELTYNYGIGDY   77 (127)
T ss_pred             ceEEEEEEeCCHHHHHHHHHH----hcCCEEEeeecCccccccccccCCCCcEEEEEEecCCCCCccEEEeEecCCCCCC
Confidence            578999999999999999998    7777531                               11224566666665556


Q ss_pred             cCCCCeeEEEEEeCCHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEc
Q 018138          293 DKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD  351 (360)
Q Consensus       293 ~~g~g~~hiaf~V~Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  351 (360)
                      +.|.+  |++|.|++. ++.++|+++|+++...|.       .+++++||||+.|||+.
T Consensus        78 ~~g~~--~~hlav~~~-d~~~~l~~~Gv~~~~~~~-------~~~fi~DPDG~~ie~~~  126 (127)
T cd08358          78 ELGND--FLGITIHSK-QAVSNAKKHNWPVTEVED-------GVYEVKAPGGYKFYLID  126 (127)
T ss_pred             CCCCC--EEEEEEECH-HHHHHHHHCCCceecCCC-------CEEEEECCCCCEEEEec
Confidence            66665  667777766 566999999999887554       27899999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>COG3324 Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

Probab=99.44  E-value=8.9e-13  Score=106.92  Aligned_cols=107  Identities=29%  Similarity=0.370  Sum_probs=84.8

Q ss_pred             CCCceeceeeecCHHHHHHHhhhcceEEeeeccCCCc----cEEEEEEeCC-----cc----cccCCCCeeEEEEEeCCH
Q 018138          242 PEPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDKN----AVLELTYNHG-----VT----EYDKGNGYAQIAIGTDDV  308 (360)
Q Consensus       242 ~~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~~----~~l~l~~~~~-----~~----~~~~g~g~~hiaf~V~Dl  308 (360)
                      ...+.|..|.|.|++++++||++    +|||+.++..    ...-.....+     ..    ...++...+++.|.|+|+
T Consensus         7 ~~~i~w~Ei~~~D~~ra~~FY~~----vFgW~~~~~~~~~~~~y~~f~~~~~~~gG~l~~~~~~~p~~~~~~iy~~v~di   82 (127)
T COG3324           7 KGTIVWFELPVSDLERAKAFYEK----VFGWTFEDYFDMGEMRYAVFPADGAGAGGGLMARPGSPPGGGGWVIYFAVDDI   82 (127)
T ss_pred             CCccEEEeeecCCHHHHHHHHHH----hhCceecccccCCCceEEEEECCCccccceeccCCcCCCCCCCEEEEEecCCh
Confidence            46789999999999999999999    9999976541    1111111111     11    122335678999999999


Q ss_pred             HHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCc
Q 018138          309 YKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  353 (360)
Q Consensus       309 ~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  353 (360)
                      +++.++++++|++|+.++.+.|+. ++++.+.||.||+|.|.+.+
T Consensus        83 d~~l~rv~~~GG~V~~p~~~~p~~-G~~a~~~Dp~Gn~~~l~s~~  126 (127)
T COG3324          83 DATLERVVAAGGKVLRPKTEFPGG-GRIAHFVDPEGNRFGLWSPA  126 (127)
T ss_pred             HHHHHHHHhcCCeEEecccccCCc-eEEEEEECCCCCEEEEeecC
Confidence            999999999999999999999965 89999999999999998754

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=99.43  E-value=9.1e-13  Score=109.11  Aligned_cols=104  Identities=21%  Similarity=0.212  Sum_probs=75.1

Q ss_pred             ceeceeeecCHHHHHHHhhhcceEEeeeccCCC----------ccEEEEEEeCCcccccCCCCeeEEEEEeC--CHHHHH
Q 018138          245 LCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK----------NAVLELTYNHGVTEYDKGNGYAQIAIGTD--DVYKTA  312 (360)
Q Consensus       245 i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~----------~~~l~l~~~~~~~~~~~g~g~~hiaf~V~--Dl~~~~  312 (360)
                      |+||.|.|+|++++.+||++    +||+.....          +..+.+.............+.+|++|.|+  |+++++
T Consensus         1 i~HV~l~V~Dl~~a~~FY~~----~LG~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hiaf~v~~~dld~~~   76 (131)
T cd08363           1 INHMTFSVSNLDKSISFYKH----VFMEKLLVLGEKTAYFTIGGTWLALNEEPDIPRNEIRQSYTHIAFTIEDSEFDAFY   76 (131)
T ss_pred             CceEEEEECCHHHHHHHHHH----hhCCEEeccCCccceEeeCceEEEEEccCCCCcCCcCccceEEEEEecHHHHHHHH
Confidence            67999999999999999999    999875321          11111111111101111246789999997  499999


Q ss_pred             HHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCc
Q 018138          313 EAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  353 (360)
Q Consensus       313 ~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  353 (360)
                      ++++++|+++..++.....+ ++.+||+|||||.|||.+..
T Consensus        77 ~~l~~~G~~~~~~~~~~~~~-~~~~~f~DPdG~~iEl~~~~  116 (131)
T cd08363          77 TRLKEAGVNILPGRKRDVRD-RKSIYFTDPDGHKLEVHTGT  116 (131)
T ss_pred             HHHHHcCCcccCCCccccCc-ceEEEEECCCCCEEEEecCc
Confidence            99999999987655433333 68899999999999998864

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=99.43  E-value=1.3e-12  Score=110.10  Aligned_cols=110  Identities=19%  Similarity=0.295  Sum_probs=80.6

Q ss_pred             CCceeceeeecCHHHHHHHhhhcceEEeeeccCCCc--cEEEEEEeCCcc--cc--cCCCCeeEEEEEeCCHHHHH---H
Q 018138          243 EPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDKN--AVLELTYNHGVT--EY--DKGNGYAQIAIGTDDVYKTA---E  313 (360)
Q Consensus       243 ~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~~--~~l~l~~~~~~~--~~--~~g~g~~hiaf~V~Dl~~~~---~  313 (360)
                      .+++|+.|.|.|++++++||++    +|||+.....  ....+.......  ..  ....++.|++|.|+|++++.   +
T Consensus         3 ~~l~Hv~i~V~Dle~s~~FY~~----~LG~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~hiaf~v~d~~~l~~~~~   78 (144)
T cd07239           3 VKISHVVLNSPDVDKTVAFYED----VLGFRVSDWLGDQMAFLRCNSDHHSIAIARGPHPSLNHVAFEMPSIDEVMRGIG   78 (144)
T ss_pred             ceeeEEEEECCCHHHHHHHHHh----cCCCEEEEeeCCeEEEEECCCCcceEEEccCCCCceEEEEEECCCHHHHHHHHH
Confidence            4789999999999999999999    9998753221  122222221111  11  12357899999999877664   8


Q ss_pred             HHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCcccc
Q 018138          314 AIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFL  356 (360)
Q Consensus       314 ~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~  356 (360)
                      +|+++|+++..++.++..+..+++||+||+||.|||++...-.
T Consensus        79 ~l~~~Gi~~~~~~~~~~~~~~~~~yf~DPdG~~iE~~~~~~~~  121 (144)
T cd07239          79 RMIDKGIDILWGPGRHGPGDNTFAYFLDPGGFVIEYTSELEQV  121 (144)
T ss_pred             HHHHcCCceeeCCcccCCCCCEEEEEECCCCcEEEeccCceEE
Confidence            9999999998877665554467899999999999999875443

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>cd07264 Glo_EDI_BRP_like_15 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.43  E-value=1.3e-12  Score=106.32  Aligned_cols=103  Identities=18%  Similarity=0.288  Sum_probs=75.8

Q ss_pred             ceeceeeecCHHHHHHHhhhcceEEeeeccCC---CccE---------EEEEEeC--------Cc--ccccCCCCeeEEE
Q 018138          245 LCQVMLRVGDLDRAINFYKKYTIAVMGYGPED---KNAV---------LELTYNH--------GV--TEYDKGNGYAQIA  302 (360)
Q Consensus       245 i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~---~~~~---------l~l~~~~--------~~--~~~~~g~g~~hia  302 (360)
                      +.|+.|.|+|++++.+||++    +|||+...   ....         +.+....        +.  ......++..|++
T Consensus         1 ~~~~~l~v~D~~~s~~FY~~----~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (125)
T cd07264           1 FGYTIIYVEDVEKTLEFYER----AFGFERRFLHESGDYGELETGETTLAFASHDLAESNLKGGFVKADPAQPPAGFEIA   76 (125)
T ss_pred             CceEEEEEcCHHHHHHHHHH----hhCCeEEeecCCCcEEEecCCcEEEEEEcccccccccccCccCCccccCCCcEEEE
Confidence            46899999999999999999    99997521   1111         1111100        00  0011123456999


Q ss_pred             EEeCCHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcC
Q 018138          303 IGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  352 (360)
Q Consensus       303 f~V~Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  352 (360)
                      |.|+|+++++++++++|+++..+|...+++ .+.++++|||||.|+++++
T Consensus        77 ~~v~di~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~~~~~~~  125 (125)
T cd07264          77 FVTDDVAAAFARAVEAGAVLVSEPKEKPWG-QTVAYVRDINGFLIELCSP  125 (125)
T ss_pred             EEcCCHHHHHHHHHHcCCEeccCCccCCCC-cEEEEEECCCCCEEEEecC
Confidence            999999999999999999999888777765 6789999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=99.43  E-value=1.2e-12  Score=106.94  Aligned_cols=103  Identities=25%  Similarity=0.335  Sum_probs=73.9

Q ss_pred             CceeceeeecCHHHHHHHhhhcceEEeeeccCCC----------------ccEEEEEEeCCcc-c---c--cCCCCeeEE
Q 018138          244 PLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK----------------NAVLELTYNHGVT-E---Y--DKGNGYAQI  301 (360)
Q Consensus       244 ~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~----------------~~~l~l~~~~~~~-~---~--~~g~g~~hi  301 (360)
                      +++|+.|.|+|++++.+||++    +|||.....                ...+++....... .   +  ..+.+.+|+
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~----~lG~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~g~~~i   76 (128)
T TIGR03081         1 RIDHVGIAVPDLEEAAKLYED----VLGAHVSHIEEVPEQGVKVVFIALGNTKVELLEPLGEDSPIAKFLEKNGGGIHHI   76 (128)
T ss_pred             CCCEEEEEeCCHHHHHHHHHH----HhCCCCccceeCCCCCcEEEEEecCCEEEEEEecCCCCChHHHHHhcCCCceEEE
Confidence            578999999999999999999    999876421                1122332211110 0   0  124578899


Q ss_pred             EEEeCCHHHHHHHHHHcCCeEeeC-CcccCCCCcEEEEE--ECCCCCeEEEEc
Q 018138          302 AIGTDDVYKTAEAIKLSGGKITRE-PGPLPGINTKITAC--LDPDGWKSVFVD  351 (360)
Q Consensus       302 af~V~Dl~~~~~~l~~~G~~i~~~-p~~~~~~~~~~~~~--~DPdG~~iel~~  351 (360)
                      +|.|+|+++++++++++|+++..+ |...+++ .+.+++  +||||+.||++|
T Consensus        77 ~~~v~di~~~~~~l~~~G~~~~~~~~~~~~~g-~~~~~~~~~dp~G~~~E~~~  128 (128)
T TIGR03081        77 AIEVDDIEAALETLKEKGVRLIDEEPRIGAGG-KPVAFLHPKSTGGVLIELEE  128 (128)
T ss_pred             EEEcCCHHHHHHHHHHCCCcccCCCCccCCCC-CEEEEecccccCcEEEEecC
Confidence            999999999999999999998875 4333332 355666  799999999975

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.43  E-value=1.4e-12  Score=104.66  Aligned_cols=99  Identities=26%  Similarity=0.399  Sum_probs=73.5

Q ss_pred             eceeeecCHHHHHHHhhhcceEEeeeccCCC-----c-cEEEEE------------EeCCccc--ccCCCCeeEEEEEeC
Q 018138          247 QVMLRVGDLDRAINFYKKYTIAVMGYGPEDK-----N-AVLELT------------YNHGVTE--YDKGNGYAQIAIGTD  306 (360)
Q Consensus       247 hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~-----~-~~l~l~------------~~~~~~~--~~~g~g~~hiaf~V~  306 (360)
                      ||.|.|.|++++.+||++    +|||+....     . ..+.+.            .......  ...+.+..|++|.|+
T Consensus         1 Hv~l~v~d~~~~~~fY~~----~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~   76 (119)
T cd07263           1 LVSLYVDDQDKALAFYTE----KLGFEVREDVPMGGGFRWVTVAPPGSPETSLVLAPPANPAAMSGLQPGGTPGLVLATD   76 (119)
T ss_pred             CceEEeCCHHHHHHHHHh----ccCeEEEEeeccCCCcEEEEEeCCCCCeeEEEEeCCCCccccccccCCCceEEEEEeh
Confidence            789999999999999999    999874321     1 111111            0110000  012346789999999


Q ss_pred             CHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEc
Q 018138          307 DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD  351 (360)
Q Consensus       307 Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  351 (360)
                      |+++++++++++|+++..++...++  ++.+|++||+|+.|||++
T Consensus        77 di~~~~~~l~~~g~~~~~~~~~~~~--~~~~~~~DP~G~~ie~~~  119 (119)
T cd07263          77 DIDATYEELKARGVEFSEEPREMPY--GTVAVFRDPDGNLFVLVQ  119 (119)
T ss_pred             HHHHHHHHHHhCCCEEeeccccCCC--ceEEEEECCCCCEEEEeC
Confidence            9999999999999999988854444  689999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07256 HPCD_C_class_II C-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD), which catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate; belongs to the type I class II family of extradiol dioxygenases

Probab=99.42  E-value=1.2e-12  Score=112.35  Aligned_cols=108  Identities=23%  Similarity=0.340  Sum_probs=77.0

Q ss_pred             CCCceeceeeecCHHHHHHHhhhcceEEeeeccCCC-----c--cEEEEEEeCCccc----ccCCCCeeEEEEEeCC---
Q 018138          242 PEPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK-----N--AVLELTYNHGVTE----YDKGNGYAQIAIGTDD---  307 (360)
Q Consensus       242 ~~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~-----~--~~l~l~~~~~~~~----~~~g~g~~hiaf~V~D---  307 (360)
                      |.+++||.|.|+|++++.+||++    +||++....     .  ....+........    ...+++++|++|.|+|   
T Consensus         1 ~~~l~Hv~l~V~Dl~~s~~FY~~----vLGl~~~~~~~~~~~~~~~~~l~~~~~~~~i~l~~~~~~~~~Hiaf~v~~~~~   76 (161)
T cd07256           1 PQRLDHFNLRVPDVDAGLAYYRD----ELGFRVSEYTEDDDGTTWAAWLHRKGGVHDTALTGGNGPRLHHVAFWVPEPHN   76 (161)
T ss_pred             CceEEEEEEecCCHHHHHHHHHh----ccCCEEEEEeccCCCcEEEEEEecCCCcceEEEecCCCCceeEEEEEcCCHHH
Confidence            46789999999999999999999    999965311     1  1122211111111    1234678999999975   


Q ss_pred             HHHHHHHHHHcCCe--EeeCCcccCCCCcEEEEEECCCCCeEEEEcCc
Q 018138          308 VYKTAEAIKLSGGK--ITREPGPLPGINTKITACLDPDGWKSVFVDNL  353 (360)
Q Consensus       308 l~~~~~~l~~~G~~--i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  353 (360)
                      +++++++|+++|+.  +..+|+.++..+.+++|++|||||.||++...
T Consensus        77 v~~~~~~L~~~G~~~~~~~~p~~~g~~~~~~~y~~DPdG~~iEl~~~~  124 (161)
T cd07256          77 IIRTCDLLAAAGYSDRIERGPGRHGISNAFFLYLRDPDGHRIEIYTGD  124 (161)
T ss_pred             HHHHHHHHHHcCCCcccccCCCccCCCCceEEEEECCCCCeEEEeecC
Confidence            77889999999986  34456555544467899999999999998654

This subfamily contains the C-terminal, catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=99.42  E-value=4.8e-13  Score=110.09  Aligned_cols=123  Identities=34%  Similarity=0.534  Sum_probs=78.5

Q ss_pred             eeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCC---------------CceEEEEEEecCCCCC-
Q 018138          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPE---------------DSHFVVELTYNYGVDK-  177 (360)
Q Consensus       114 ~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~---------------~~~~~lel~~~~~~~~-  177 (360)
                      .+.|..++|.|+.++..||++++|+.+..+..+.+..+...|++....               ..+..+|+.++.+... 
T Consensus        22 ~~~~t~~rvkd~~~Sl~fytr~~gm~l~~~~~fke~~Fsl~fL~~~~~~~vP~~~~~~~v~~~~~~~~~ELthn~Gtes~  101 (170)
T KOG2944|consen   22 LLQQTMLRVKDPTGSLKFYTRVNGMALLVPDDFKEAKFSLYFLGAEVSEDVPKPEHGVSVFVFSRNAKLELTHNWGTESP  101 (170)
T ss_pred             hhhhceeecccchhhhhhhhhhccceeechhhhhHhhhHHHhhcccccccCccCCCCCceEEecccCceeeecCCCCCCC
Confidence            345666677777777777777777666654333322222222222100               0122577776544322 


Q ss_pred             ----Cc----CCCcceEEEEEECCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeec
Q 018138          178 ----YD----IGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (360)
Q Consensus       178 ----~~----~g~g~~hi~f~V~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~  238 (360)
                          +.    .++|++||||.|+|+++++++|+++|+++...|.....  ..++|+.||||+.|||...
T Consensus       102 ~~~~~~ngN~~prGfgHIci~V~di~sac~~lkekGV~f~Kk~~dGk~--K~iaF~~dpDgywiei~~~  168 (170)
T KOG2944|consen  102 PDQAYLNGNKEPRGFGHICIEVDDINSACERLKEKGVRFKKKLKDGKM--KPIAFLHDPDGYWIEIELE  168 (170)
T ss_pred             cchhhcCCCCCCCccceEEEEeCCHHHHHHHHHHhCceeeecCCCccc--cceeEEECCCCCeEEEeec
Confidence                11    23599999999999999999999999997766543222  2479999999999999764

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.41  E-value=1.8e-12  Score=104.95  Aligned_cols=105  Identities=21%  Similarity=0.329  Sum_probs=77.2

Q ss_pred             CCceeceeeecCHHHHHHHhhhcceEEeeeccCCCc---cEEEEEEe---------CCc---ccccCCCCeeEEEEEeCC
Q 018138          243 EPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDKN---AVLELTYN---------HGV---TEYDKGNGYAQIAIGTDD  307 (360)
Q Consensus       243 ~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~~---~~l~l~~~---------~~~---~~~~~g~g~~hiaf~V~D  307 (360)
                      .+++|+.|.|.|++++.+||++    +|||......   ....+...         .+.   .....+.+..|++|.+++
T Consensus         2 ~~l~hi~l~v~d~~~s~~Fy~~----~lG~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hi~~~~~~   77 (125)
T cd07253           2 KRIDHVVLTVADIEATLDFYTR----VLGMEVVRFGEEVGRKALRFGSQKINLHPVGGEFEPAAGSPGPGSDDLCLITEP   77 (125)
T ss_pred             cccceEEEEecCHHHHHHHHHH----HhCceeecccccCCceEEEeCCEEEEEecCCCccCcCccCCCCCCceEEEEecc
Confidence            3689999999999999999999    8998753211   11122111         110   001234578999999974


Q ss_pred             -HHHHHHHHHHcCCeEeeCCcccCC--CCcEEEEEECCCCCeEEEEc
Q 018138          308 -VYKTAEAIKLSGGKITREPGPLPG--INTKITACLDPDGWKSVFVD  351 (360)
Q Consensus       308 -l~~~~~~l~~~G~~i~~~p~~~~~--~~~~~~~~~DPdG~~iel~~  351 (360)
                       +++++++++++|+++..+|.+.++  +.++.+||+||||+.||+++
T Consensus        78 ~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~  124 (125)
T cd07253          78 PIDELVAHLEAHGVPIEEGPVPRTGARGPITSVYFRDPDGNLIELSN  124 (125)
T ss_pred             cHHHHHHHHHHCCceeecCcccccCCCCCccEEEEECCCCCEEEeee
Confidence             999999999999999888765433  22578999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.41  E-value=2.4e-12  Score=105.45  Aligned_cols=107  Identities=16%  Similarity=0.163  Sum_probs=77.7

Q ss_pred             CCceeceeeecCHHHHHHHhhhcceEEeeeccCCC-ccEEEEEEeCCcc--cc-cCCCCeeEEEEEeCC---HHHHHHHH
Q 018138          243 EPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK-NAVLELTYNHGVT--EY-DKGNGYAQIAIGTDD---VYKTAEAI  315 (360)
Q Consensus       243 ~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~-~~~l~l~~~~~~~--~~-~~g~g~~hiaf~V~D---l~~~~~~l  315 (360)
                      .++.||.|.|+|++++.+||++    +||++.... .....+.......  .. ...++..|++|.|+|   ++++++++
T Consensus         5 ~~l~~v~l~v~d~~~s~~FY~~----vLG~~~~~~~~~~~~l~~~~~~~~i~l~~~~~~~~~iaf~v~~~~dv~~~~~~l   80 (124)
T cd08361           5 QDIAYVRLGTRDLAGATRFATD----ILGLQVAERTAKATYFRSDARDHTLVYIEGDPAEQASGFELRDDDALESAATEL   80 (124)
T ss_pred             EEeeEEEEeeCCHHHHHHHHHh----ccCceeccCCCCeEEEEcCCccEEEEEEeCCCceEEEEEEECCHHHHHHHHHHH
Confidence            4689999999999999999999    999986432 2233333211110  11 122567899999975   99999999


Q ss_pred             HHcCCeEeeCCcccC--CCCcEEEEEECCCCCeEEEEcCc
Q 018138          316 KLSGGKITREPGPLP--GINTKITACLDPDGWKSVFVDNL  353 (360)
Q Consensus       316 ~~~G~~i~~~p~~~~--~~~~~~~~~~DPdG~~iel~~~~  353 (360)
                      +++|+++..++....  .+..+++||+|||||.||++...
T Consensus        81 ~~~G~~~~~~~~~~~~~~~~~~~~~f~DPdG~~iE~~~~~  120 (124)
T cd08361          81 EQYGHEVRRGTAEECELRKVKAFIAFRDPSGNSIELVVRP  120 (124)
T ss_pred             HHcCCceEEcCHHHhhcCCcceEEEEECcCCCEEEEEEee
Confidence            999999987664321  12256789999999999998654

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.40  E-value=2.5e-12  Score=103.97  Aligned_cols=100  Identities=20%  Similarity=0.173  Sum_probs=73.1

Q ss_pred             eceeeecCHHHHHHHhhhcceEEeeeccCCCc------------cEEEEEEeCCcc-c---ccCCCCeeEEEEEeCCHHH
Q 018138          247 QVMLRVGDLDRAINFYKKYTIAVMGYGPEDKN------------AVLELTYNHGVT-E---YDKGNGYAQIAIGTDDVYK  310 (360)
Q Consensus       247 hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~~------------~~l~l~~~~~~~-~---~~~g~g~~hiaf~V~Dl~~  310 (360)
                      +..|.|.|++++.+||++    +|||+.....            ..+.+....... .   ........|++|.|+|+++
T Consensus         4 ~~~l~v~D~~~s~~FY~~----~lG~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~v~did~   79 (119)
T cd08359           4 YPVIVTDDLAETADFYVR----HFGFTVVFDSDWYVSLRSPDGGVELAFMLPGHETVPAAQYQFQGQGLILNFEVDDVDA   79 (119)
T ss_pred             eeEEEECCHHHHHHHHHH----hhCcEEEeccCcEEEEecCCCceEEEEccCCCCCCcchhcccCCceEEEEEEECCHHH
Confidence            567999999999999999    9998743211            111111110000 0   0111233599999999999


Q ss_pred             HHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEc
Q 018138          311 TAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD  351 (360)
Q Consensus       311 ~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  351 (360)
                      ++++++++|+++..+|...+.+ .+.++++||||+.|||+|
T Consensus        80 ~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DP~G~~ie~~~  119 (119)
T cd08359          80 EYERLKAEGLPIVLPLRDEPWG-QRHFIVRDPNGVLIDIVQ  119 (119)
T ss_pred             HHHHHHhcCCCeeeccccCCCc-ceEEEEECCCCCEEEEEC
Confidence            9999999999999888777764 689999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.40  E-value=2.2e-12  Score=102.31  Aligned_cols=99  Identities=26%  Similarity=0.286  Sum_probs=73.8

Q ss_pred             ceeceeeecCHHHHHHHhhhcceEEeeeccCCCc----cEEEEEEeCC-cc------cc----cCCCCeeEEEEEeCCHH
Q 018138          245 LCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDKN----AVLELTYNHG-VT------EY----DKGNGYAQIAIGTDDVY  309 (360)
Q Consensus       245 i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~~----~~l~l~~~~~-~~------~~----~~g~g~~hiaf~V~Dl~  309 (360)
                      ++|+.|.|.|++++.+||++    +|||......    ....+....+ ..      ..    ..+.+..|++|.|+|++
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~----~lG~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~v~d~~   76 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTD----VLGLEEGPRPPFLFPGAWLYAGDGPQLHLIEEDPPDALPEGPGRDDHIAFRVDDLD   76 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHH----ccCCcccCcCCCCCCceEEEeCCCcEEEEEecCCCccccCCCcccceEEEEeCCHH
Confidence            58999999999999999999    9999754321    1122222111 10      01    12346789999999999


Q ss_pred             HHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEE
Q 018138          310 KTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVF  349 (360)
Q Consensus       310 ~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel  349 (360)
                      +++++++++|+++..++.+.++  .+.++++||+|+.|||
T Consensus        77 ~~~~~l~~~g~~~~~~~~~~~~--~~~~~~~DP~G~~iE~  114 (114)
T cd07245          77 AFRARLKAAGVPYTESDVPGDG--VRQLFVRDPDGNRIEL  114 (114)
T ss_pred             HHHHHHHHcCCCcccccCCCCC--ccEEEEECCCCCEEeC
Confidence            9999999999999988765222  5789999999999996

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.40  E-value=3.4e-12  Score=103.78  Aligned_cols=106  Identities=17%  Similarity=0.178  Sum_probs=76.9

Q ss_pred             CceeceeeecCHHHHHHHhhhcceEEeeeccCCC--ccEEEEEEeCCcc--cc--cCCCCeeEEEEEeC---CHHHHHHH
Q 018138          244 PLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK--NAVLELTYNHGVT--EY--DKGNGYAQIAIGTD---DVYKTAEA  314 (360)
Q Consensus       244 ~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~--~~~l~l~~~~~~~--~~--~~g~g~~hiaf~V~---Dl~~~~~~  314 (360)
                      +++||.|.|+|+++|.+||++    +||++....  .....+.......  ..  ...++..|++|.|+   |+++++++
T Consensus         2 ~l~~v~l~v~Dl~~s~~FY~~----~LG~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~f~v~~~~dl~~~~~~   77 (120)
T cd07252           2 SLGYLGVESSDLDAWRRFATD----VLGLQVGDRPEDGALYLRMDDRAWRIAVHPGEADDLAYAGWEVADEAALDALAAR   77 (120)
T ss_pred             cccEEEEEeCCHHHHHHHHHh----ccCceeccCCCCCeEEEEccCCceEEEEEeCCCCceeEEEEEECCHHHHHHHHHH
Confidence            689999999999999999999    999975432  1222232211111  11  12357789999996   58999999


Q ss_pred             HHHcCCeEeeCCccc--CCCCcEEEEEECCCCCeEEEEcCc
Q 018138          315 IKLSGGKITREPGPL--PGINTKITACLDPDGWKSVFVDNL  353 (360)
Q Consensus       315 l~~~G~~i~~~p~~~--~~~~~~~~~~~DPdG~~iel~~~~  353 (360)
                      |+++|+++...|.+.  ..+.++.+||+|||||.|||+...
T Consensus        78 l~~~Gv~~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~  118 (120)
T cd07252          78 LRAAGVAVEEGSAELAAERGVEGLIRFADPDGNRHELFWGP  118 (120)
T ss_pred             HHHcCCeEEEcCHHHHhhCCCcEEEEEECCCCCEEEEEecc
Confidence            999999998765422  222257899999999999998653

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=99.38  E-value=3.3e-12  Score=105.69  Aligned_cols=106  Identities=19%  Similarity=0.173  Sum_probs=74.2

Q ss_pred             CCceeceeeecCHHHHHHHhhhcceEEeeeccCCCc--cE-----EEEEEeCC----cc-c-ccCCCCeeEEEEEeC--C
Q 018138          243 EPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDKN--AV-----LELTYNHG----VT-E-YDKGNGYAQIAIGTD--D  307 (360)
Q Consensus       243 ~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~~--~~-----l~l~~~~~----~~-~-~~~g~g~~hiaf~V~--D  307 (360)
                      .+++|+.|.|+|++++.+||++    +||++.....  ..     .......+    .. . ....++.+|++|.|+  |
T Consensus         3 ~~i~hv~l~V~dl~~s~~FY~~----~lG~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~Hiaf~v~~~~   78 (131)
T cd08364           3 EGLSHITLIVKDLNKTTAFLQN----IFNAREVYSSGDKTFSLSKEKFFLIGGLWIAIMEGDSLQERTYNHIAFKISDSD   78 (131)
T ss_pred             ccEeEEEEEeCCHHHHHHHHHH----HhCCeeEEecccccccccceeEEEcCCeEEEEecCCCCCCCCceEEEEEcCHHH
Confidence            4689999999999999999999    9998642110  00     00000000    00 0 011236899999997  7


Q ss_pred             HHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCc
Q 018138          308 VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  353 (360)
Q Consensus       308 l~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  353 (360)
                      ++++.++|+++|+++..+. +...+.++.+||+|||||.|||....
T Consensus        79 ld~~~~~l~~~gv~~~~~~-~~~~~~g~~~yf~DPdG~~iEl~~~~  123 (131)
T cd08364          79 VDEYTERIKALGVEMKPPR-PRVQGEGRSIYFYDFDNHLFELHTGT  123 (131)
T ss_pred             HHHHHHHHHHCCCEEecCC-ccccCCceEEEEECCCCCEEEEecCC
Confidence            9999999999999976433 22333368999999999999998764

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07266 HPCD_N_class_II N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

Probab=99.38  E-value=3.1e-12  Score=103.80  Aligned_cols=106  Identities=21%  Similarity=0.191  Sum_probs=77.9

Q ss_pred             CCceeceeeecCHHHHHHHhhhcceEEeeeccCCC-ccEEEEEEeC--Ccc--cc--cCCCCeeEEEEEe---CCHHHHH
Q 018138          243 EPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK-NAVLELTYNH--GVT--EY--DKGNGYAQIAIGT---DDVYKTA  312 (360)
Q Consensus       243 ~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~-~~~l~l~~~~--~~~--~~--~~g~g~~hiaf~V---~Dl~~~~  312 (360)
                      .++.|+.|.|+|++++++||++    +|||+.... .....+....  ...  ..  ...++..|++|.|   +|+++++
T Consensus         3 ~~i~hi~l~v~d~~~~~~Fy~~----~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~hi~~~v~~~~dv~~~~   78 (121)
T cd07266           3 LRLGHVELRVTDLEKSREFYVD----VLGLVETEEDDDRIYLRGLEEFIHHSLVLTKAPVAGLGHIAFRVRSEEDLDKAE   78 (121)
T ss_pred             ceeeEEEEEcCCHHHHHHHHHh----ccCCEEeccCCCeEEEEecCCCceEEEEEeeCCCCceeEEEEECCCHHHHHHHH
Confidence            4789999999999999999999    999976432 1222232111  101  11  1235789999999   4788999


Q ss_pred             HHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcC
Q 018138          313 EAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  352 (360)
Q Consensus       313 ~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  352 (360)
                      ++++++|+++...|.....+.++.+|++||||+.||++..
T Consensus        79 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~  118 (121)
T cd07266          79 AFFQELGLPTEWVEAGEEPGQGRALRVEDPLGFPIEFYAE  118 (121)
T ss_pred             HHHHHcCCCcccccCCcCCCCccEEEEECCCCCEEEEEec
Confidence            9999999999876544443335789999999999999864

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a differ

>cd08351 ChaP_like ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

Probab=99.38  E-value=4.4e-12  Score=103.56  Aligned_cols=105  Identities=16%  Similarity=0.201  Sum_probs=75.8

Q ss_pred             CceeceeeecCHHHHHHHhhhcceEEeeeccCCC-ccEEEEEEeCCc-c---cccCCCCeeEEEEEeC--CHHHHHHHHH
Q 018138          244 PLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK-NAVLELTYNHGV-T---EYDKGNGYAQIAIGTD--DVYKTAEAIK  316 (360)
Q Consensus       244 ~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~-~~~l~l~~~~~~-~---~~~~g~g~~hiaf~V~--Dl~~~~~~l~  316 (360)
                      ++.|+.|.|+|+++|++||++    +|||+.... .....+....+. .   ......+..|++|.|+  |+++++++++
T Consensus         4 ~~~hv~l~v~Dl~~s~~FY~~----~lG~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~h~a~~v~~~dl~~~~~~l~   79 (123)
T cd08351           4 TLNHTIVPARDREASAEFYAE----ILGLPWAKPFGPFAVVKLDNGVSLDFAQPDGEIPPQHYAFLVSEEEFDRIFARIR   79 (123)
T ss_pred             eEeEEEEEcCCHHHHHHHHHH----hcCCEeeeccCCEEEEEcCCCcEEEEecCCCCCCcceEEEEeCHHHHHHHHHHHH
Confidence            578999999999999999999    999875432 111111111110 0   1112235689999886  6999999999


Q ss_pred             HcCCeEeeCCccc------CCCCcEEEEEECCCCCeEEEEcC
Q 018138          317 LSGGKITREPGPL------PGINTKITACLDPDGWKSVFVDN  352 (360)
Q Consensus       317 ~~G~~i~~~p~~~------~~~~~~~~~~~DPdG~~iel~~~  352 (360)
                      ++|+++..+|...      ...+++.+||+|||||.|||++.
T Consensus        80 ~~G~~~~~~~~~~~~~~~~~~~g~~~~~f~DPdG~~iEl~~~  121 (123)
T cd08351          80 ERGIDYWADPQRTEPGQINTNDGGRGVYFLDPDGHLLEIITR  121 (123)
T ss_pred             HcCCceecCCcccccccccCCCCeeEEEEECCCCCEEEEEec
Confidence            9999998776543      12336999999999999999986

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.38  E-value=5.1e-12  Score=101.13  Aligned_cols=100  Identities=19%  Similarity=0.168  Sum_probs=74.1

Q ss_pred             ceeeecCHHHHHHHhhhcceEEeeeccCCCccE-EEEEEeCC-ccc--c----cCCCCeeEEEEEeCCHHHHHHHHHHcC
Q 018138          248 VMLRVGDLDRAINFYKKYTIAVMGYGPEDKNAV-LELTYNHG-VTE--Y----DKGNGYAQIAIGTDDVYKTAEAIKLSG  319 (360)
Q Consensus       248 v~L~V~D~e~a~~FY~~~~~~~lG~~~~~~~~~-l~l~~~~~-~~~--~----~~g~g~~hiaf~V~Dl~~~~~~l~~~G  319 (360)
                      ..|.|+|++++.+||++    +|||+....... ..+....+ ...  .    ..+....|++|.|+|+++++++++++|
T Consensus         4 ~~l~v~Dl~~s~~FY~~----~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~v~d~~~~~~~l~~~G   79 (112)
T cd07238           4 PNLPVADPEAAAAFYAD----VLGLDVVMDHGWIATFASPQNMTVQVSLATEGGTATVVPDLSIEVDDVDAALARAVAAG   79 (112)
T ss_pred             ceEecCCHHHHHHHHHH----hcCceEEEcCCceEEEeecCCCCcEEEEecCCCCCCCCCEEEEEeCCHHHHHHHHHhcC
Confidence            46899999999999999    999985422111 11111111 110  1    112346799999999999999999999


Q ss_pred             CeEeeCCcccCCCCcEEEEEECCCCCeEEEEcC
Q 018138          320 GKITREPGPLPGINTKITACLDPDGWKSVFVDN  352 (360)
Q Consensus       320 ~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  352 (360)
                      +++..+|...+++ .+.+++.||+||.|+++++
T Consensus        80 ~~~~~~~~~~~~g-~~~~~~~DP~Gn~i~~~~~  111 (112)
T cd07238          80 FAIVYGPTDEPWG-VRRFFVRDPFGKLVNILTH  111 (112)
T ss_pred             CeEecCCccCCCc-eEEEEEECCCCCEEEEEEc
Confidence            9999888776654 5889999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

Probab=99.37  E-value=3.3e-12  Score=103.33  Aligned_cols=107  Identities=24%  Similarity=0.313  Sum_probs=78.3

Q ss_pred             CCceeceeeecCHHHHHHHhhhcceEEeeeccCCC-ccEEEEEEeCCcc---cc--cCCCCeeEEEEEe---CCHHHHHH
Q 018138          243 EPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK-NAVLELTYNHGVT---EY--DKGNGYAQIAIGT---DDVYKTAE  313 (360)
Q Consensus       243 ~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~-~~~l~l~~~~~~~---~~--~~g~g~~hiaf~V---~Dl~~~~~  313 (360)
                      .+|+|+.|.|+|++++++||++    +|||+.... .....+.......   ..  ...++.+|++|.|   ++++++++
T Consensus         2 ~~i~hv~l~v~d~~~s~~FY~~----~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~   77 (120)
T cd08362           2 TALRGVGLGVPDLAAAAAFYRE----VWGLSVVAEDDGIVYLRATGSEHHILRLRRSDRNRLDVVSFSVASRADVDALAR   77 (120)
T ss_pred             ceeeEEEEecCCHHHHHHHHHh----CcCcEEEEecCCEEEEECCCCccEEEEeccCCCCCCceEEEEeCCHHHHHHHHH
Confidence            4689999999999999999999    999975321 1222332211110   11  1234678999999   57899999


Q ss_pred             HHHHcCCeEeeCCcccC-CCCcEEEEEECCCCCeEEEEcCc
Q 018138          314 AIKLSGGKITREPGPLP-GINTKITACLDPDGWKSVFVDNL  353 (360)
Q Consensus       314 ~l~~~G~~i~~~p~~~~-~~~~~~~~~~DPdG~~iel~~~~  353 (360)
                      +++++|+++..+|.... ..+++.++|+||+||.|||+...
T Consensus        78 ~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~  118 (120)
T cd08362          78 QVAARGGTVLSEPGATDDPGGGYGFRFFDPDGRLIEFSADV  118 (120)
T ss_pred             HHHHcCCceecCCcccCCCCCceEEEEECCCCCEEEEEecc
Confidence            99999999988764332 22368899999999999998764

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.37  E-value=6e-12  Score=103.07  Aligned_cols=104  Identities=23%  Similarity=0.317  Sum_probs=76.0

Q ss_pred             CceeceeeecCHHHHHHHhhhcceEEe---eeccCCC------------ccEEEEEEeCCccc---ccCCCCeeEEEEEe
Q 018138          244 PLCQVMLRVGDLDRAINFYKKYTIAVM---GYGPEDK------------NAVLELTYNHGVTE---YDKGNGYAQIAIGT  305 (360)
Q Consensus       244 ~i~hv~L~V~D~e~a~~FY~~~~~~~l---G~~~~~~------------~~~l~l~~~~~~~~---~~~g~g~~hiaf~V  305 (360)
                      +++||.+.|.|++++.+||++    +|   ||+....            ...+.+........   ...+.+.+|++|.|
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~----~l~~~G~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~g~~hia~~v   76 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDW----LLGLLGFEEVKEWEDGRSWRAGDGGTYLVLQQADGESAGRHDRRNPGLHHLAFRA   76 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHH----HHhhcCCEEEEeeccCceEEecCCceEEEEEecccCCCcccccCCcCeeEEEEEc
Confidence            478999999999999999999    88   9875321            11222221111110   11235789999999


Q ss_pred             C---CHHHHHHHHHHcCCeEeeCCccc--CCCCcEEEEEECCCCCeEEEEc
Q 018138          306 D---DVYKTAEAIKLSGGKITREPGPL--PGINTKITACLDPDGWKSVFVD  351 (360)
Q Consensus       306 ~---Dl~~~~~~l~~~G~~i~~~p~~~--~~~~~~~~~~~DPdG~~iel~~  351 (360)
                      +   |+++++++++++|+++...+...  .....+.+|++||||++|||+.
T Consensus        77 ~~~~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DpdG~~ie~~~  127 (128)
T cd07242          77 PSREAVDELYARLAKRGAEILYAPREPYAGGPGYYALFFEDPDGIRLELVA  127 (128)
T ss_pred             CCHHHHHHHHHHHHHcCCeEecCCcccccCCCcEEEEEEECCCCcEEEEEe
Confidence            6   58899999999999999887653  2233689999999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07261 Glo_EDI_BRP_like_11 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.36  E-value=8e-12  Score=100.24  Aligned_cols=97  Identities=29%  Similarity=0.373  Sum_probs=71.8

Q ss_pred             ceeeecCHHHHHHHhhhcceEEeeeccCCCcc-E----------EEEEEeCCcccc-cCCCCeeEEEEEeCC---HHHHH
Q 018138          248 VMLRVGDLDRAINFYKKYTIAVMGYGPEDKNA-V----------LELTYNHGVTEY-DKGNGYAQIAIGTDD---VYKTA  312 (360)
Q Consensus       248 v~L~V~D~e~a~~FY~~~~~~~lG~~~~~~~~-~----------l~l~~~~~~~~~-~~g~g~~hiaf~V~D---l~~~~  312 (360)
                      +.|.|+|++++.+||++    +|||+...... .          +.+......... ....+.+|++|.|++   +++++
T Consensus         2 ~~l~v~d~~~a~~FY~~----~lg~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~   77 (114)
T cd07261           2 VLLYVEDPAASAEFYSE----LLGREPVELSPTFALFVLGSGVKLGLWSRHTVEPASDATGGGSELAFMVDDGAAVDALY   77 (114)
T ss_pred             EEEEECCHHHHHHHHHH----HcCCCccCCCCceEEEEeCCCcEEEEeeccccCCCCCCCCCceEEEEEcCCHHHHHHHH
Confidence            57899999999999999    99998543211 1          111111111101 123467899999975   88999


Q ss_pred             HHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEE
Q 018138          313 EAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFV  350 (360)
Q Consensus       313 ~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~  350 (360)
                      ++++++|+++..+|...+.  ++.++|+|||||.||++
T Consensus        78 ~~~~~~g~~v~~~~~~~~~--g~~~~~~DPdGn~ie~~  113 (114)
T cd07261          78 AEWQAKGVKIIQEPTEMDF--GYTFVALDPDGHRLRVF  113 (114)
T ss_pred             HHHHHCCCeEecCccccCC--ccEEEEECCCCCEEEee
Confidence            9999999999998887776  46789999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.36  E-value=3.6e-12  Score=103.62  Aligned_cols=104  Identities=18%  Similarity=0.172  Sum_probs=75.3

Q ss_pred             CCceeceeeecCHHHHHHHhhhcceEEeeeccCCCc-cEEEEEEeC--Ccc--c--ccCCCCeeEEEEEeC---CHHHHH
Q 018138          243 EPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDKN-AVLELTYNH--GVT--E--YDKGNGYAQIAIGTD---DVYKTA  312 (360)
Q Consensus       243 ~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~~-~~l~l~~~~--~~~--~--~~~g~g~~hiaf~V~---Dl~~~~  312 (360)
                      .+++|+.|.|+|++++.+||++    +||++..... ....+....  ...  .  ....+++.|++|.|+   |++++.
T Consensus         5 ~~i~hv~l~v~dl~~a~~FY~~----~lG~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~h~af~v~~~~~v~~~~   80 (121)
T cd09013           5 AHLAHVELLTPKPEESLWFFTD----VLGLEETGREGQSVYLRAWGDYEHHSLKLTESPEAGLGHIAWRASSPEALERRV   80 (121)
T ss_pred             cEeeEEEEEeCCHHHHHHHHHh----CcCCEEEeecCCeEEEEeccCCCccEEEEeeCCCCceEEEEEEcCCHHHHHHHH
Confidence            5789999999999999999999    9999754321 122222111  111  1  123468899999996   688999


Q ss_pred             HHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcC
Q 018138          313 EAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  352 (360)
Q Consensus       313 ~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  352 (360)
                      ++++++|+++...+...+.  +..+||+|||||.||++-.
T Consensus        81 ~~l~~~G~~~~~~~~~~~~--~~~~~~~DPdG~~iEl~~~  118 (121)
T cd09013          81 AALEASGLGIGWIEGDPGH--GKAYRFRSPDGHPMELYWE  118 (121)
T ss_pred             HHHHHcCCccccccCCCCC--cceEEEECCCCCEEEEEEe
Confidence            9999999998554433333  5678999999999999864

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C

>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.36  E-value=1.1e-11  Score=99.81  Aligned_cols=103  Identities=21%  Similarity=0.271  Sum_probs=72.2

Q ss_pred             EEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEECCHHHHH
Q 018138          119 VYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTV  198 (360)
Q Consensus       119 ~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~Dld~~~  198 (360)
                      .|.|+|++++++||++ |||++..+.    ..  .+++..+.    ..+.+.......    ..+..+++|.|+|+++++
T Consensus         6 ~l~v~Dl~~s~~FY~~-LGf~~~~~~----~~--~~~l~~~~----~~l~l~~~~~~~----~~~~~~~~~~v~did~~~   70 (113)
T cd08356           6 FIPAKDFAESKQFYQA-LGFELEWEN----DN--LAYFRLGN----CAFYLQDYYVKD----WAENSMLHLEVDDLEAYY   70 (113)
T ss_pred             ccccccHHHHHHHHHH-hCCeeEecC----CC--EEEEEcCC----EEEEeecCCCcc----cccCCEEEEEECCHHHHH
Confidence            3889999999999988 999998653    12  35666542    233333211111    122357899999999999


Q ss_pred             HHHHHcCCeEe-----cCCeecCCCCEEEEEEECCCCCEEEEee
Q 018138          199 DLVKAKGGKVT-----REPGPVKGGNTVIAFIEDPDGYKFELLE  237 (360)
Q Consensus       199 ~rL~~~G~~~~-----~~p~~~~~g~~~~~~~~DPdG~~iEl~~  237 (360)
                      ++|+++|+++.     .++...++|.+ .++|+|||||.|++.+
T Consensus        71 ~~l~~~G~~~~~~~~~~~~~~~~~g~r-~f~~~DPdGn~~~~~~  113 (113)
T cd08356          71 EHIKALGLPKKFPGVKLPPITQPWWGR-EFFLHDPSGVLWHIGQ  113 (113)
T ss_pred             HHHHHcCCcccccceecCccccCCCcE-EEEEECCCccEEEeeC
Confidence            99999998743     34444456654 6999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07251 Glo_EDI_BRP_like_10 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.36  E-value=1.7e-11  Score=98.99  Aligned_cols=110  Identities=26%  Similarity=0.342  Sum_probs=77.3

Q ss_pred             EEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCC------CCCCcCCCcceEEEEEE
Q 018138          118 VVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYG------VDKYDIGTGFGHFGIAV  191 (360)
Q Consensus       118 V~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~------~~~~~~g~g~~hi~f~V  191 (360)
                      |.|.|+|++++.+||+++|||++..+.   ...  ..++..+    ...+++.....      ......+.+..|++|.+
T Consensus         2 i~l~v~d~~~a~~FY~~~lg~~~~~~~---~~~--~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (121)
T cd07251           2 ITLGVADLARSRAFYEALLGWKPSADS---NDG--VAFFQLG----GLVLALFPREELAKDAGVPVPPPGFSGITLAHNV   72 (121)
T ss_pred             eeEeeCCHHHHHHHHHHhcCceecccC---CCc--eEEEEcC----CeEEEEecchhhhhhcCCCCCCCCccceEEEEEc
Confidence            679999999999999999999987541   122  3455542    23566554221      11111222334566655


Q ss_pred             ---CCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEee
Q 018138          192 ---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (360)
Q Consensus       192 ---~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~  237 (360)
                         +|++++++++++.|+++..++...++|++ .++++||+||.||+..
T Consensus        73 ~~~~d~~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DP~Gn~iei~~  120 (121)
T cd07251          73 RSEEEVDAVLARAAAAGATIVKPPQDVFWGGY-SGYFADPDGHLWEVAH  120 (121)
T ss_pred             CCHHHHHHHHHHHHhCCCEEecCCccCCCCce-EEEEECCCCCEEEEee
Confidence               57999999999999999888777666654 5899999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=99.35  E-value=7.7e-12  Score=100.47  Aligned_cols=104  Identities=22%  Similarity=0.348  Sum_probs=78.2

Q ss_pred             CceeceeeecCHHHHHHHhhhcceEEeeeccCCCc-cEEEEEEe-CCccc--c--cCCCCeeEEEEEeC---CHHHHHHH
Q 018138          244 PLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDKN-AVLELTYN-HGVTE--Y--DKGNGYAQIAIGTD---DVYKTAEA  314 (360)
Q Consensus       244 ~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~~-~~l~l~~~-~~~~~--~--~~g~g~~hiaf~V~---Dl~~~~~~  314 (360)
                      +++|+.|.|+|++++.+||++    +|||+..... ....+... .+...  .  ....+..|++|.|+   |++++.++
T Consensus         2 ~l~hv~l~v~d~~~~~~FY~~----~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~v~~~~~v~~~~~~   77 (117)
T cd07240           2 RIAYAELEVPDLERALEFYTD----VLGLTVLDRDAGSVYLRCSEDDHHSLVLTEGDEPGVDALGFEVASEEDLEALAAH   77 (117)
T ss_pred             ceeEEEEecCCHHHHHHHHHh----ccCcEEEeecCCeEEEecCCCCcEEEEEEeCCCCCceeEEEEcCCHHHHHHHHHH
Confidence            689999999999999999999    9999764321 12222221 11111  1  12357899999996   68899999


Q ss_pred             HHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcC
Q 018138          315 IKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  352 (360)
Q Consensus       315 l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  352 (360)
                      ++++|+++...+...+++ ++.+|++||+|+.+|++..
T Consensus        78 l~~~g~~~~~~~~~~~~~-~~~~~~~DP~G~~ie~~~~  114 (117)
T cd07240          78 LEAAGVAPEEASDPEPGV-GRGLRFQDPDGHLLELFVE  114 (117)
T ss_pred             HHHcCCceEEcCccCCCC-ceEEEEECCCCCEEEEEEc
Confidence            999999999887645543 6889999999999999865

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=99.35  E-value=6.5e-13  Score=107.87  Aligned_cols=102  Identities=30%  Similarity=0.377  Sum_probs=71.8

Q ss_pred             CceeceeeecCHHHHHHHhhhcceEEeeeccCCCcc------EEE------------EEEeCCcccccCC-----CCeeE
Q 018138          244 PLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDKNA------VLE------------LTYNHGVTEYDKG-----NGYAQ  300 (360)
Q Consensus       244 ~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~~~------~l~------------l~~~~~~~~~~~g-----~g~~h  300 (360)
                      +|+||+|.|+|++++.+||++    +||++......      ...            +...........+     .+.+|
T Consensus         1 ~l~Hi~i~v~d~~~~~~FY~~----~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~   76 (128)
T PF00903_consen    1 GLDHIAIRVKDLEKAIDFYTD----VLGFRLVEESDNDGEGGDLRIAFLRIGEGHIELFLNPSPPPRASGHSFPEHGGHH   76 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHH----TTTSEEEEEEEEESTTEEEEEEEEESTSSCEEEEEEESSSSSSEEEHHHSHTSEE
T ss_pred             CeEEEEEEcCCHHHHHHHHHH----HhCCcEEeeeccccccccccceeecccccceeeeeecccccccccccccccccee
Confidence            479999999999999999999    99987532211      111            1111100000000     02356


Q ss_pred             EEEEe---CCHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEE
Q 018138          301 IAIGT---DDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVF  349 (360)
Q Consensus       301 iaf~V---~Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel  349 (360)
                      +++.+   +|+++++++|++.|+++..+|.+........+|++||+|+.|||
T Consensus        77 i~~~~~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~y~~Dp~G~~iE~  128 (128)
T PF00903_consen   77 IAFLAFDVDDLDAAYERLKAQGVEIVEEPDRYYFGSGYSFYFRDPDGNLIEF  128 (128)
T ss_dssp             EEEEESSHHHHHHHHHHHHHTTGEEEEEEEEHSTTCEEEEEEEETTSEEEEE
T ss_pred             EEEEeccHHHHHHHHHHHhhcCccEEecCCCCCCCCEEEEEEECCCCCEEEC
Confidence            66665   57889999999999999999988877655667899999999997

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>cd08355 Glo_EDI_BRP_like_14 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.35  E-value=9.6e-12  Score=101.12  Aligned_cols=99  Identities=24%  Similarity=0.310  Sum_probs=74.1

Q ss_pred             ceeeecCHHHHHHHhhhcceEEeeeccCC-----Ccc--EEEEEEe---------CCcccc----cCCCCeeEEEEEeCC
Q 018138          248 VMLRVGDLDRAINFYKKYTIAVMGYGPED-----KNA--VLELTYN---------HGVTEY----DKGNGYAQIAIGTDD  307 (360)
Q Consensus       248 v~L~V~D~e~a~~FY~~~~~~~lG~~~~~-----~~~--~l~l~~~---------~~~~~~----~~g~g~~hiaf~V~D  307 (360)
                      -.|.|+|++++.+||++    +||++...     ...  ...+...         ......    ..+++..|++|.|+|
T Consensus         3 p~l~v~d~~~a~~FY~~----~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~d   78 (122)
T cd08355           3 PTLRYRDAAAAIDWLTD----AFGFEERLVVPDDDGGVAHAELRFGDGGVMVGSVRDDYRASSARAGGAGTQGVYVVVDD   78 (122)
T ss_pred             EEEEECCHHHHHHHHHH----hcCCEEEEEEeCCCCcEEEEEEEECCEEEEEecCCCcccccccccCCCceEEEEEEECC
Confidence            46889999999999999    99987531     111  1122211         100001    133467899999999


Q ss_pred             HHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEc
Q 018138          308 VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD  351 (360)
Q Consensus       308 l~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  351 (360)
                      +++++++++++|+++..+|...+++ .+.++++|||||+|+|.+
T Consensus        79 ~d~~~~~l~~~G~~v~~~~~~~~~g-~~~~~~~DPdG~~~~l~~  121 (122)
T cd08355          79 VDAHYERARAAGAEILREPTDTPYG-SREFTARDPEGNLWTFGT  121 (122)
T ss_pred             HHHHHHHHHHCCCEEeeCccccCCC-cEEEEEECCCCCEEEEec
Confidence            9999999999999999998877765 688999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.34  E-value=9.1e-12  Score=106.52  Aligned_cols=103  Identities=17%  Similarity=0.128  Sum_probs=73.6

Q ss_pred             CceeceeeecCHHHHHHHhhhcceEEeeeccCCCc-cEEEEEEeC---Cc-cc----------ccCCCCeeEEEEEeCC-
Q 018138          244 PLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDKN-AVLELTYNH---GV-TE----------YDKGNGYAQIAIGTDD-  307 (360)
Q Consensus       244 ~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~~-~~l~l~~~~---~~-~~----------~~~g~g~~hiaf~V~D-  307 (360)
                      +++||.|.|+|++++.+||++    +|||+..... ..+.+....   +. ..          .....++.|++|.|+| 
T Consensus         1 gl~HI~i~V~Dle~s~~FY~~----~LG~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~l~Hiaf~v~d~   76 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLTD----VLGFREVGEEGDRVRLEEGGGGPGAVVDVLEEPDQPRGRPGAGTVHHVAFRVPDD   76 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHHH----hcCCEEEeeeCCEEEEEecCCCCCCEEEEEeCCCCCCCcccCCceEEEEEECCCH
Confidence            478999999999999999999    9998753221 111111110   10 00          1112468899999988 


Q ss_pred             --HHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCc
Q 018138          308 --VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  353 (360)
Q Consensus       308 --l~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  353 (360)
                        +++++++|+++|+++.. +...++  .+.+||+||||+.|||+...
T Consensus        77 ~dvd~~~~~L~~~Gv~~~~-~~~~~~--~~s~yf~DPdG~~iEl~~~~  121 (157)
T cd08347          77 EELEAWKERLEALGLPVSG-IVDRFY--FKSLYFREPGGILFEIATDG  121 (157)
T ss_pred             HHHHHHHHHHHHCCCCccc-cccccc--EEEEEEECCCCcEEEEEECC
Confidence              89999999999998643 333333  57899999999999998764

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd08343 ED_TypeI_classII_C C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

Probab=99.34  E-value=1.3e-11  Score=102.05  Aligned_cols=105  Identities=22%  Similarity=0.343  Sum_probs=77.9

Q ss_pred             eeceeeecCHHHHHHHhhhcceEEeeeccCCCc------cEEEEEEeCCcc--c-c-c-CCCCeeEEEEEeCCHH---HH
Q 018138          246 CQVMLRVGDLDRAINFYKKYTIAVMGYGPEDKN------AVLELTYNHGVT--E-Y-D-KGNGYAQIAIGTDDVY---KT  311 (360)
Q Consensus       246 ~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~~------~~l~l~~~~~~~--~-~-~-~g~g~~hiaf~V~Dl~---~~  311 (360)
                      +||.|.|+|++++.+||++    +||++.....      ....+..+....  . . . ...++.|++|.|+|++   ++
T Consensus         1 ~Hv~l~V~dl~~a~~Fy~~----~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~hl~~~v~d~~~~~~~   76 (131)
T cd08343           1 DHVVLRTPDVAATAAFYTE----VLGFRVSDRVGDPGVDAAAFLRCDEDHHDLALFPGPERPGLHHVAFEVESLDDILRA   76 (131)
T ss_pred             CcEEEEcCCHHHHHHHHHh----cCCCEEEEEEccCCceeEEEEEcCCCcceEEEEcCCCCCCeeEEEEEcCCHHHHHHH
Confidence            5899999999999999999    9998753211      112222221111  1 1 1 1468899999998764   78


Q ss_pred             HHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCcc
Q 018138          312 AEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  354 (360)
Q Consensus       312 ~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  354 (360)
                      +++++++|+++..+|...+.+..++++|+||+|+.|||.+...
T Consensus        77 ~~~l~~~G~~i~~~~~~~~~~~~~~~~~~DPdG~~iei~~~~~  119 (131)
T cd08343          77 ADRLAANGIQIEFGPGRHGPGNNLFLYFRDPDGNRVELSAEMY  119 (131)
T ss_pred             HHHHHHcCCeeEECCCccCCCCcEEEEEECCCCCEEEEEcCCc
Confidence            8999999999998887666554688999999999999998743

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are

>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin

Probab=99.34  E-value=6.7e-12  Score=100.38  Aligned_cols=101  Identities=23%  Similarity=0.327  Sum_probs=71.0

Q ss_pred             eceeeecCHHHHHHHhhhcceEEeeeccCCC---ccEEEE-----EEeCCcccccCCCCeeEEEEEe--CCHHHHHHHHH
Q 018138          247 QVMLRVGDLDRAINFYKKYTIAVMGYGPEDK---NAVLEL-----TYNHGVTEYDKGNGYAQIAIGT--DDVYKTAEAIK  316 (360)
Q Consensus       247 hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~---~~~l~l-----~~~~~~~~~~~g~g~~hiaf~V--~Dl~~~~~~l~  316 (360)
                      ||.|.|+|++++.+||++    +||++....   ...+.+     ...........+.+..|++|.|  +|+++++++++
T Consensus         1 Hv~l~v~d~~~s~~Fy~~----~lg~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~hiaf~v~~~d~~~~~~~l~   76 (113)
T cd08345           1 HITLIVKDLNKSIAFYRD----ILGAELIYSSSKEAYFELAGLWICLMEEDSLQGPERTYTHIAFQIQSEEFDEYTERLK   76 (113)
T ss_pred             CeeEEECCHHHHHHHHHH----hcCCeeeeccCceeEEEecCeEEEeccCCCcCCCCCCccEEEEEcCHHHHHHHHHHHH
Confidence            789999999999999999    999875322   111211     1111100001234678999999  57999999999


Q ss_pred             HcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcC
Q 018138          317 LSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  352 (360)
Q Consensus       317 ~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  352 (360)
                      ++|+++...+...+. .++.+|++||||+.||++..
T Consensus        77 ~~G~~~~~~~~~~~~-~~~~~~~~DPdG~~iEi~~~  111 (113)
T cd08345          77 ALGVEMKPERPRVQG-EGRSIYFYDPDGHLLELHAG  111 (113)
T ss_pred             HcCCccCCCccccCC-CceEEEEECCCCCEEEEEeC
Confidence            999998754332222 26889999999999999853

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=99.32  E-value=1.7e-11  Score=99.92  Aligned_cols=102  Identities=27%  Similarity=0.421  Sum_probs=73.2

Q ss_pred             ceeceeeecCHHHHHHHhhhcceEEeeeccCCCc-------c----------EEEEEEeCCc-cc-----ccCCCCeeEE
Q 018138          245 LCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDKN-------A----------VLELTYNHGV-TE-----YDKGNGYAQI  301 (360)
Q Consensus       245 i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~~-------~----------~l~l~~~~~~-~~-----~~~g~g~~hi  301 (360)
                      +.||.|.|+|++++.+||++    +|||......       .          .+++...... ..     ...+++..|+
T Consensus         1 ~~hv~l~v~d~~~~~~fy~~----~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~g~~h~   76 (128)
T cd07249           1 IDHIGIAVPDLEAAIKFYRD----VLGVGPWEEEEVPPEQGVRVAFLGLGNVQIELIEPLDDDSPIAKFLEKRGEGLHHI   76 (128)
T ss_pred             CcEEEEEeCCHHHHHHHHHH----hhCCCCccccccCcccccEEEEEEcCCEEEEEEEECCCCCcHHHHHhcCCCceEEE
Confidence            57999999999999999999    9999863211       0          1111111111 01     1235788999


Q ss_pred             EEEeCCHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCC---CCeEEEEc
Q 018138          302 AIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPD---GWKSVFVD  351 (360)
Q Consensus       302 af~V~Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPd---G~~iel~~  351 (360)
                      +|.|+|+++++++++++|+++..+|...+.+ ++.+++.||+   |+.|||++
T Consensus        77 ~f~v~d~~~~~~~l~~~G~~~~~~~~~~~~~-g~~~~~~d~~~~~g~~iE~~~  128 (128)
T cd07249          77 AFEVDDIDAALARLKAQGVRLLQEGPRIGAG-GKRVAFLHPKDTGGVLIELVE  128 (128)
T ss_pred             EEEeCCHHHHHHHHHHCCCeeeccCCCccCC-CCEEEEEecCCCceEEEEecC
Confidence            9999999999999999999999887644444 4445555555   99999975

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>cd07244 FosA FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

Probab=99.31  E-value=1.1e-11  Score=100.92  Aligned_cols=102  Identities=22%  Similarity=0.299  Sum_probs=74.0

Q ss_pred             CceeceeeecCHHHHHHHhhhcceEEeeeccCCC-ccEEEEEEeCCc------ccccCCCCeeEEEEEe--CCHHHHHHH
Q 018138          244 PLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK-NAVLELTYNHGV------TEYDKGNGYAQIAIGT--DDVYKTAEA  314 (360)
Q Consensus       244 ~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~-~~~l~l~~~~~~------~~~~~g~g~~hiaf~V--~Dl~~~~~~  314 (360)
                      ++.|+.|.|+|++++.+||++    +||++.... .....+......      ...+..++..|++|.+  +|+++++++
T Consensus         1 ~i~hv~l~v~d~~~~~~FY~~----vLG~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~hi~f~v~~~dl~~~~~~   76 (121)
T cd07244           1 GINHITLAVSDLERSVAFYVD----LLGFKLHVRWDKGAYLEAGDLWLCLSVDANVGPAKDYTHYAFSVSEEDFASLKEK   76 (121)
T ss_pred             CcceEEEEECCHHHHHHHHHH----hcCCEEEEecCCceEEecCCEEEEEecCCCCCCCCCeeeEEEEeCHHHHHHHHHH
Confidence            478999999999999999999    999975321 111112111000      0012245688999998  589999999


Q ss_pred             HHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCc
Q 018138          315 IKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  353 (360)
Q Consensus       315 l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  353 (360)
                      ++++|+++..++..  .  ++.+||+|||||.|||+...
T Consensus        77 l~~~G~~~~~~~~~--~--~~~~~f~DPdG~~ie~~~~~  111 (121)
T cd07244          77 LRQAGVKEWKENTS--E--GDSFYFLDPDGHKLELHVGS  111 (121)
T ss_pred             HHHcCCcccCCCCC--C--ccEEEEECCCCCEEEEEeCC
Confidence            99999998765432  2  46899999999999998764

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.30  E-value=2.5e-11  Score=98.70  Aligned_cols=102  Identities=26%  Similarity=0.279  Sum_probs=71.5

Q ss_pred             ceeceeeecCHHHHHHHhhhcceEE---eeeccCCC--ccEEEEEEeCCcc----------cccCCCCeeEEEEEeCC--
Q 018138          245 LCQVMLRVGDLDRAINFYKKYTIAV---MGYGPEDK--NAVLELTYNHGVT----------EYDKGNGYAQIAIGTDD--  307 (360)
Q Consensus       245 i~hv~L~V~D~e~a~~FY~~~~~~~---lG~~~~~~--~~~l~l~~~~~~~----------~~~~g~g~~hiaf~V~D--  307 (360)
                      +.|++|.|+|++++.+||++    +   ||+.....  ...+.+....+..          ......+..|++|.|+|  
T Consensus         1 l~hv~l~v~d~~~s~~FY~~----~f~~lg~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~hi~f~v~~~~   76 (123)
T cd07262           1 IDHVTLGVNDLERARAFYDA----VLAPLGIKRVMEDGPGAVGYGKGGGGPDFWVTKPFDGEPATAGNGTHVAFAAPSRE   76 (123)
T ss_pred             CcEEEEecCcHHHHHHHHHH----HHhhcCceEEeecCCceeEeccCCCCceEEEeccccCCCCCCCCceEEEEECCCHH
Confidence            57999999999999999998    6   57653211  1122221110000          00112345799999976  


Q ss_pred             -HHHHHHHHHHcCCeEeeCCcccCC--CCcEEEEEECCCCCeEEEE
Q 018138          308 -VYKTAEAIKLSGGKITREPGPLPG--INTKITACLDPDGWKSVFV  350 (360)
Q Consensus       308 -l~~~~~~l~~~G~~i~~~p~~~~~--~~~~~~~~~DPdG~~iel~  350 (360)
                       +++++++++++|+++..+|...+.  ...+.+||+|||||.|||+
T Consensus        77 ~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ie~~  122 (123)
T cd07262          77 AVDAFHAAALAAGGTDEGAPGLRPHYGPGYYAAYVRDPDGNKIEAV  122 (123)
T ss_pred             HHHHHHHHHHHcCCccCCCCCCCCCCCCCeEEEEEECCCCCEEEEe
Confidence             788999999999999888876653  3346799999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd09014 BphC-JF8_C_like C-terminal, catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.30  E-value=1.6e-11  Score=105.92  Aligned_cols=106  Identities=21%  Similarity=0.271  Sum_probs=77.2

Q ss_pred             CCceeceeeecCHHHHHHHhhhcceEEeeeccCCC-----c--cEEEEEEeCCcc--cc-----cCCCCeeEEEEEeCC-
Q 018138          243 EPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK-----N--AVLELTYNHGVT--EY-----DKGNGYAQIAIGTDD-  307 (360)
Q Consensus       243 ~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~-----~--~~l~l~~~~~~~--~~-----~~g~g~~hiaf~V~D-  307 (360)
                      .+++|+.|.|+|++++.+||++    +|||+..+.     .  ....+..+....  ..     ....+++|++|.|+| 
T Consensus         5 ~~i~Hi~l~V~Dle~a~~FY~~----vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~hiaf~v~~~   80 (166)
T cd09014           5 RRLDHVNLLASDVDANRDFMEE----VLGFRLREQIRLDNGKEAGAWMSVSNKVHDVAYTRDPAGARGRLHHLAYALDTR   80 (166)
T ss_pred             ceeeeEEEEcCCHHHHHHHHHH----ccCCEEEEEEecCCCceEEEEEeCCCCceeEEEecCCCCCCCCceEEEEECCCH
Confidence            5789999999999999999999    999974211     0  112222111110  01     112367899999975 


Q ss_pred             --HHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcC
Q 018138          308 --VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  352 (360)
Q Consensus       308 --l~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  352 (360)
                        +++++++|+++|+++..+|..++.....++|++||||+.|||+..
T Consensus        81 ~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~  127 (166)
T cd09014          81 EDVLRAADIFLENGIFIEAGPGKHGIQQTFFLYVYEPGGNRVELFGG  127 (166)
T ss_pred             HHHHHHHHHHHHcCCccccCCcccCCCCceEEEEECCCCCEEEEEEc
Confidence              558889999999999878876665445679999999999999887

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C. Th

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=99.30  E-value=1.1e-11  Score=98.23  Aligned_cols=96  Identities=25%  Similarity=0.343  Sum_probs=70.7

Q ss_pred             eeecCHHHHHHHhhhcceEEeeeccCCC-ccEEEEEEe----C---Ccc----cccCCCCeeEEEEEeCCHHHHHHHHHH
Q 018138          250 LRVGDLDRAINFYKKYTIAVMGYGPEDK-NAVLELTYN----H---GVT----EYDKGNGYAQIAIGTDDVYKTAEAIKL  317 (360)
Q Consensus       250 L~V~D~e~a~~FY~~~~~~~lG~~~~~~-~~~l~l~~~----~---~~~----~~~~g~g~~hiaf~V~Dl~~~~~~l~~  317 (360)
                      |.|+|++++++||++    +|||+.... .....+...    .   ...    ......+..|++|.|+|++++++++++
T Consensus         1 l~v~d~~~a~~FY~~----~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~dv~~~~~~l~~   76 (108)
T PF12681_consen    1 LPVSDLEAAAAFYED----VLGFEVVFDDPDYVDFSLGFRFHDGVIEFLQFPDPPGPPGGGFHLCFEVEDVDALYERLKE   76 (108)
T ss_dssp             EEESSHHHHHHHHHH----TTTSEEEEEETSEEEEEETEEEEEEEEEEEEEESSSSSSSSEEEEEEEESHHHHHHHHHHH
T ss_pred             CccCCHHHHHHHHHH----hcCCEEEEeCCCeEEEEeccchhhhhHHHccCCccccCCCceeEEEEEEcCHHHHHHHHHH
Confidence            679999999999999    999975431 111111110    0   000    112245789999999999999999999


Q ss_pred             cCCeEeeCCcccCCCCcEEEEEECCCCCeEEEE
Q 018138          318 SGGKITREPGPLPGINTKITACLDPDGWKSVFV  350 (360)
Q Consensus       318 ~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~  350 (360)
                      +|+++..+|...+++ .+.+++.|||||.|||+
T Consensus        77 ~G~~~~~~~~~~~~g-~~~~~~~DPdG~~ie~~  108 (108)
T PF12681_consen   77 LGAEIVTEPRDDPWG-QRSFYFIDPDGNRIEFC  108 (108)
T ss_dssp             TTSEEEEEEEEETTS-EEEEEEE-TTS-EEEEE
T ss_pred             CCCeEeeCCEEcCCC-eEEEEEECCCCCEEEeC
Confidence            999999988877774 69999999999999986

...

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.30  E-value=3.4e-11  Score=98.01  Aligned_cols=103  Identities=19%  Similarity=0.235  Sum_probs=74.3

Q ss_pred             CceeceeeecCHHHHHHHhhhcceEEeeeccCCC-ccEEEEEE-----------eCCcc-cccCCCCeeEEEEEeC---C
Q 018138          244 PLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK-NAVLELTY-----------NHGVT-EYDKGNGYAQIAIGTD---D  307 (360)
Q Consensus       244 ~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~-~~~l~l~~-----------~~~~~-~~~~g~g~~hiaf~V~---D  307 (360)
                      +++|+.|.|.|++++.+||++    +|||..... .....+..           ..+.. ......+..|++|.|+   |
T Consensus         2 ~i~hi~l~v~d~~~~~~Fy~~----~lG~~~~~~~~~~~~l~~~~~~~~l~l~~~~~~~~~~~~~~~~~hi~f~v~~~~~   77 (125)
T cd07255           2 RIGAVTLRVADLERSLAFYQD----VLGLEVLERTDSTAVLGTGGKRPLLVLEEDPDAPPAPPGATGLYHFAILLPSRAD   77 (125)
T ss_pred             EEEEEEEEECCHHHHHHHHHh----ccCcEEEEcCCCEEEEecCCCeEEEEEEeCCCCCcccCCCCcEEEEEEECCCHHH
Confidence            588999999999999999999    999875322 11222221           11110 0112357889999996   5


Q ss_pred             HHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCc
Q 018138          308 VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  353 (360)
Q Consensus       308 l~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  353 (360)
                      +++++++++++|+++.. +..++.  .+.+|++|||||+|||....
T Consensus        78 v~~~~~~l~~~g~~~~~-~~~~~~--~~~~~~~DPdG~~iEi~~~~  120 (125)
T cd07255          78 LAAALRRLIELGIPLVG-ASDHLV--SEALYLSDPEGNGIEIYADR  120 (125)
T ss_pred             HHHHHHHHHHcCCceec-cccccc--eeEEEEECCCCCEEEEEEec
Confidence            89999999999998754 334444  47899999999999998654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.30  E-value=1.6e-11  Score=99.57  Aligned_cols=100  Identities=19%  Similarity=0.210  Sum_probs=70.9

Q ss_pred             CceeceeeecCHHHHHHHhhhcceEEeeeccCCC----c----cEEEEEEe---CCc----------cc-c-cCCCCeeE
Q 018138          244 PLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK----N----AVLELTYN---HGV----------TE-Y-DKGNGYAQ  300 (360)
Q Consensus       244 ~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~----~----~~l~l~~~---~~~----------~~-~-~~g~g~~h  300 (360)
                      +++|+.|.|.|++++.+||++    +|||+....    .    ..+.+...   .+.          .. . ....+..|
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~~----~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~h   76 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYTD----VLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWPDAGPKGRRGPGQIHH   76 (126)
T ss_pred             CcccEEEEcCChhHhHHHHHH----ccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEecCCCCCCCCCCCCcEEE
Confidence            478999999999999999999    999874311    0    11111111   010          00 0 11235789


Q ss_pred             EEEEeC---CHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEE
Q 018138          301 IAIGTD---DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFV  350 (360)
Q Consensus       301 iaf~V~---Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~  350 (360)
                      ++|.|+   |+++++++++++|+++...+.. .  ..+.+|++||+|+.|||+
T Consensus        77 i~f~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~--~~~~~~~~DP~G~~iE~~  126 (126)
T cd08346          77 IAFSVPSEASLDAWRERLRAAGVPVSGVVDH-F--GERSIYFEDPDGLRLELT  126 (126)
T ss_pred             EEEEcCCHHHHHHHHHHHHHcCCcccceEee-c--ceEEEEEECCCCCEEEeC
Confidence            999997   5799999999999998764432 2  268899999999999985

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd08349 BLMA_like Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

Probab=99.30  E-value=2.8e-11  Score=96.30  Aligned_cols=98  Identities=23%  Similarity=0.299  Sum_probs=70.9

Q ss_pred             eeeecCHHHHHHHhhhcceEEeeeccCCC---ccEEEEEEeCC------ccccc--CCCCeeEEEEEeCCHHHHHHHHHH
Q 018138          249 MLRVGDLDRAINFYKKYTIAVMGYGPEDK---NAVLELTYNHG------VTEYD--KGNGYAQIAIGTDDVYKTAEAIKL  317 (360)
Q Consensus       249 ~L~V~D~e~a~~FY~~~~~~~lG~~~~~~---~~~l~l~~~~~------~~~~~--~g~g~~hiaf~V~Dl~~~~~~l~~  317 (360)
                      .|.|+|++++.+||++    +|||+....   .....+.....      .....  ...+.+|++|.|+|++++++++++
T Consensus         3 ~i~v~d~~~s~~FY~~----~lg~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   78 (112)
T cd08349           3 VLPVSDIERSLAFYRD----VLGFEVDWEHPEPGYAFLSRGGAQLMLSEHDGDEPVPLGRGGSVYIEVEDVDALYAELKA   78 (112)
T ss_pred             EEEECCHHHHHHHHHh----ccCeEEEEEcCCCcEEEEEeCCEEEEEeccCCCCCCCCCCcEEEEEEeCCHHHHHHHHHH
Confidence            5899999999999999    999874221   11222211100      00011  234667999999999999999999


Q ss_pred             cCCe-EeeCCcccCCCCcEEEEEECCCCCeEEEEc
Q 018138          318 SGGK-ITREPGPLPGINTKITACLDPDGWKSVFVD  351 (360)
Q Consensus       318 ~G~~-i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  351 (360)
                      +|++ +..++...+++ .+.++++||+|+.|||+|
T Consensus        79 ~G~~~~~~~~~~~~~g-~~~~~~~DP~G~~ie~~~  112 (112)
T cd08349          79 KGADLIVYPPEDQPWG-MREFAVRDPDGNLLRFGE  112 (112)
T ss_pred             cCCcceecCccCCCcc-cEEEEEECCCCCEEEecC
Confidence            9999 66667655553 588999999999999986

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the large

>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

Probab=99.29  E-value=3e-11  Score=97.12  Aligned_cols=104  Identities=19%  Similarity=0.218  Sum_probs=74.3

Q ss_pred             CCceeceeeecCHHHHHHHhhhcceEEeeeccCCC-ccEEEEEEeCCccc---cc--CCCCeeEEEEEeCCHHHHHHHHH
Q 018138          243 EPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK-NAVLELTYNHGVTE---YD--KGNGYAQIAIGTDDVYKTAEAIK  316 (360)
Q Consensus       243 ~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~-~~~l~l~~~~~~~~---~~--~g~g~~hiaf~V~Dl~~~~~~l~  316 (360)
                      .++.|+.|.|.|++++.+||++     |||+.... .....+........   ..  ..+++.|++|.|+|.+++.+.++
T Consensus         2 ~~l~hv~l~v~Dl~~s~~FY~~-----lGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~af~v~~~~~~~~~~~   76 (113)
T cd07267           2 TDIAHVRFEHPDLDKAERFLTD-----FGLEVAARTDDELYYRGYGTDPFVYVARKGEKARFVGAAFEAASRADLEKAAA   76 (113)
T ss_pred             cEEEEEEEccCCHHHHHHHHHH-----cCCEEEEecCCeEEEecCCCccEEEEcccCCcCcccEEEEEECCHHHHHHHHH
Confidence            3689999999999999999985     58764321 11223322111111   11  23578899999999999999999


Q ss_pred             HcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCc
Q 018138          317 LSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  353 (360)
Q Consensus       317 ~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  353 (360)
                      ++|.++...+. .+.+ ++.++|+|||||.|||+-..
T Consensus        77 ~~g~~~~~~~~-~~~~-~~~~~~~DPdG~~iEl~~~~  111 (113)
T cd07267          77 LPGASVIDDLE-APGG-GKRVTLTDPDGFPVELVYGQ  111 (113)
T ss_pred             cCCCeeecCCC-CCCC-ceEEEEECCCCCEEEEEecc
Confidence            99998876543 3443 68899999999999997653

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=99.28  E-value=3e-11  Score=98.10  Aligned_cols=100  Identities=20%  Similarity=0.285  Sum_probs=70.6

Q ss_pred             ceeceeeecCHHHHHHHhhhcceEEeeeccCCCc---cEEEEEEeCC----------ccc----c-cCCCCeeEEEEEe-
Q 018138          245 LCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDKN---AVLELTYNHG----------VTE----Y-DKGNGYAQIAIGT-  305 (360)
Q Consensus       245 i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~~---~~l~l~~~~~----------~~~----~-~~g~g~~hiaf~V-  305 (360)
                      ++||.|.|+|+++|++||+     .|||+.....   ...++....+          ...    . +.+.+..|++|.+ 
T Consensus         1 ~~~i~l~V~D~~~a~~FY~-----~LGf~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~   75 (122)
T cd07235           1 LDAVGIVVADMAKSLDFYR-----RLGFDFPEEADDEPHVEAVLPGGVRLAWDTVESIRSFTPGWTPTGGHRIALAFLCE   75 (122)
T ss_pred             CceEEEEeccHHHHHHHHH-----HhCceecCCcCCCCcEEEEeCCCEEEEEEcccceeeecCCCCCCCCCcEEEEEEcC
Confidence            5799999999999999996     4677542110   1111211100          000    1 1223456888876 


Q ss_pred             --CCHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEE
Q 018138          306 --DDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFV  350 (360)
Q Consensus       306 --~Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~  350 (360)
                        +|+++++++++++|+++..+|...+.+ .+.++++|||||.|||+
T Consensus        76 ~~~dvd~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~  121 (122)
T cd07235          76 TPAEVDALYAELVGAGYPGHKEPWDAPWG-QRYAIVKDPDGNLVDLF  121 (122)
T ss_pred             CHHHHHHHHHHHHHCCCCcCCCCccCCCC-CEEEEEECCCCCEEEEe
Confidence              489999999999999999888777764 58899999999999986

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=99.28  E-value=2.7e-11  Score=97.15  Aligned_cols=101  Identities=21%  Similarity=0.205  Sum_probs=69.9

Q ss_pred             CceeceeeecCHHHHHHHhhhcceEEeeeccCCCccEEEEEEeCCcc---cc--cCCCCeeEEEE--EeCCHHHHHHHHH
Q 018138          244 PLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDKNAVLELTYNHGVT---EY--DKGNGYAQIAI--GTDDVYKTAEAIK  316 (360)
Q Consensus       244 ~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~~~~l~l~~~~~~~---~~--~~g~g~~hiaf--~V~Dl~~~~~~l~  316 (360)
                      +|+|+.|.|.|++++.+||+     .|||+.........+.......   ..  ....+..|++|  .++|+++++++++
T Consensus         2 ~i~hv~l~v~d~~~s~~FY~-----~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~   76 (112)
T cd08344           2 SIDHFALEVPDLEVARRFYE-----AFGLDVREEGDGLELRTAGNDHRWARLLEGARKRLAYLSFGIFEDDFAAFARHLE   76 (112)
T ss_pred             ceeEEEEecCCHHHHHHHHH-----HhCCcEEeecCceEEEecCCCceEEEeecCCCCceeeEEEEeEhhhHHHHHHHHH
Confidence            68999999999999999996     6888764332223332111110   01  12234555555  4589999999999


Q ss_pred             HcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcC
Q 018138          317 LSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  352 (360)
Q Consensus       317 ~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  352 (360)
                      ++|+++..++. ...  .+.+||+||+||.|||...
T Consensus        77 ~~Gi~~~~~~~-~~~--~~~~~~~DP~Gn~iel~~~  109 (112)
T cd08344          77 AAGVALAAAPP-GAD--PDGVWFRDPDGNLLQVKVA  109 (112)
T ss_pred             HcCCceecCCC-cCC--CCEEEEECCCCCEEEEecC
Confidence            99999887652 222  4569999999999999854

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=99.27  E-value=5.4e-11  Score=98.29  Aligned_cols=105  Identities=21%  Similarity=0.298  Sum_probs=74.8

Q ss_pred             CceeceeeecCHHHHHHHhhhcceEEeeeccCCCc---cEEEEEEe-CCcc--c------c---cCCCCeeEEEEEeCCH
Q 018138          244 PLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDKN---AVLELTYN-HGVT--E------Y---DKGNGYAQIAIGTDDV  308 (360)
Q Consensus       244 ~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~~---~~l~l~~~-~~~~--~------~---~~g~g~~hiaf~V~Dl  308 (360)
                      +++|+.|.|.|++++.+||++    +|||+.....   ....+... ....  .      .   ...+++.|++|.|+|+
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~----~lG~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~~~   76 (134)
T cd08348           1 RLSHVVLYVRDLEAMVRFYRD----VLGFTVTDRGPLGGLVFLSRDPDEHHQIALITGRPAAPPPGPAGLNHIAFEVDSL   76 (134)
T ss_pred             CeeEEEEEecCHHHHHHHHHH----hcCCEEEeeccCCcEEEEEecCCCceEEEEEecCCCCCCCCCCCceEEEEEeCCH
Confidence            578999999999999999999    9998753211   12222211 0000  0      0   1224788999999875


Q ss_pred             H---HHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCccc
Q 018138          309 Y---KTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDF  355 (360)
Q Consensus       309 ~---~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  355 (360)
                      +   ++++++.++|+++...+. .++  ++.+|++||+||.|||+...+.
T Consensus        77 ~~v~~~~~~l~~~G~~~~~~~~-~~~--~~~~~~~DP~G~~ie~~~~~~~  123 (134)
T cd08348          77 DDLRDLYERLRAAGITPVWPVD-HGN--AWSIYFRDPDGNRLELFVDTPW  123 (134)
T ss_pred             HHHHHHHHHHHHCCCCccccCC-CCc--eeEEEEECCCCCEEEEEEcCCC
Confidence            5   688999999999877542 333  5789999999999999976543

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.27  E-value=2.8e-11  Score=98.75  Aligned_cols=100  Identities=23%  Similarity=0.233  Sum_probs=70.0

Q ss_pred             ceeceeeecCHHHHHHHhhhcceEEeeeccCC---C----------ccEEEEEEeCCcc-----cc--cCCCCeeEEEEE
Q 018138          245 LCQVMLRVGDLDRAINFYKKYTIAVMGYGPED---K----------NAVLELTYNHGVT-----EY--DKGNGYAQIAIG  304 (360)
Q Consensus       245 i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~---~----------~~~l~l~~~~~~~-----~~--~~g~g~~hiaf~  304 (360)
                      +.++.|.|+|+++|++||++     |||+...   .          ...+.+.......     ..  +.+.+..|++|.
T Consensus         1 ~~~v~l~V~Dl~~s~~FY~~-----lGf~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~l~f~   75 (124)
T cd09012           1 MIFINLPVKDLEKSTAFYTA-----LGFEFNPQFSDEKAACMVISDNIFVMLLTEDFFQTFTPKPIADTKKSTEVLISLS   75 (124)
T ss_pred             CEEEEeecCCHHHHHHHHHH-----CCCEEccccCCCCeEEEEECCceEEEEEcHHHHhhccCCCcccCCCCCeEEEEEe
Confidence            35789999999999999974     5775321   0          0111121110000     00  122345699999


Q ss_pred             eC---CHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEc
Q 018138          305 TD---DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD  351 (360)
Q Consensus       305 V~---Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  351 (360)
                      |+   |+++++++++++|+++..+|...++  ++.+||+|||||.|||+.
T Consensus        76 v~~~~~vd~~~~~l~~~G~~i~~~p~~~~~--~~~~~~~DPdG~~ie~~~  123 (124)
T cd09012          76 ADSREEVDELVEKALAAGGKEFREPQDHGF--MYGRSFADLDGHLWEVLW  123 (124)
T ss_pred             CCCHHHHHHHHHHHHHCCCcccCCcccCCc--eEEEEEECCCCCEEEEEE
Confidence            97   5889999999999999988876665  577899999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.26  E-value=4.8e-11  Score=96.46  Aligned_cols=100  Identities=21%  Similarity=0.173  Sum_probs=72.8

Q ss_pred             ceeeecCHHHHHHHhhhcceEEeeeccCC-----Ccc--EEEEEEeCC------ccc-----ccCCCCeeEEEEEeCCHH
Q 018138          248 VMLRVGDLDRAINFYKKYTIAVMGYGPED-----KNA--VLELTYNHG------VTE-----YDKGNGYAQIAIGTDDVY  309 (360)
Q Consensus       248 v~L~V~D~e~a~~FY~~~~~~~lG~~~~~-----~~~--~l~l~~~~~------~~~-----~~~g~g~~hiaf~V~Dl~  309 (360)
                      ..|.|+|++++.+||++    +||+....     ...  ...+.....      ..+     ...+.+..|++|.|+|++
T Consensus         5 ~~l~v~d~~~a~~FY~~----~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~d~~   80 (122)
T cd07246           5 PYLIVRDAAAAIDFYKK----AFGAEELERMPDDDGRVMHAELRIGDSVLMLADEFPEHGSPASWGGTPVSLHLYVEDVD   80 (122)
T ss_pred             EEEEECCHHHHHHHHHH----hhCCEEEEEEeCCCCCEEEEEEEECCEEEEEecCCcccCCCCCCCCceEEEEEEeCCHH
Confidence            35889999999999999    99986421     111  111111100      000     012346789999999999


Q ss_pred             HHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcC
Q 018138          310 KTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  352 (360)
Q Consensus       310 ~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  352 (360)
                      ++++++.+.|+++..+|...+++ .+.++++||||+.|+|++.
T Consensus        81 ~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DP~G~~~~l~~~  122 (122)
T cd07246          81 ATFARAVAAGATSVMPPADQFWG-DRYGGVRDPFGHRWWIATH  122 (122)
T ss_pred             HHHHHHHHCCCeEecCccccccc-ceEEEEECCCCCEEEEecC
Confidence            99999999999999988766654 6899999999999999873

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=99.26  E-value=2.4e-11  Score=100.12  Aligned_cols=103  Identities=26%  Similarity=0.318  Sum_probs=72.8

Q ss_pred             CceeceeeecCHHHHHHHhhhcceEEeeeccCC---------------CccEEEEEEeCCccc-----ccC----CCCee
Q 018138          244 PLCQVMLRVGDLDRAINFYKKYTIAVMGYGPED---------------KNAVLELTYNHGVTE-----YDK----GNGYA  299 (360)
Q Consensus       244 ~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~---------------~~~~l~l~~~~~~~~-----~~~----g~g~~  299 (360)
                      ++.++.|.+++..+...||..    +||++..+               ....+|++.++|...     +..    ++|.+
T Consensus        42 r~~gm~l~~~~~fke~~Fsl~----fL~~~~~~~vP~~~~~~~v~~~~~~~~~ELthn~Gtes~~~~~~~ngN~~prGfg  117 (170)
T KOG2944|consen   42 RVNGMALLVPDDFKEAKFSLY----FLGAEVSEDVPKPEHGVSVFVFSRNAKLELTHNWGTESPPDQAYLNGNKEPRGFG  117 (170)
T ss_pred             hhccceeechhhhhHhhhHHH----hhcccccccCccCCCCCceEEecccCceeeecCCCCCCCcchhhcCCCCCCCccc
Confidence            445555566666666666655    77775332               134567778877643     211    34999


Q ss_pred             EEEEEeCCHHHHHHHHHHcCCeEeeCCcccCCCCc-EEEEEECCCCCeEEEEcCc
Q 018138          300 QIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINT-KITACLDPDGWKSVFVDNL  353 (360)
Q Consensus       300 hiaf~V~Dl~~~~~~l~~~G~~i~~~p~~~~~~~~-~~~~~~DPdG~~iel~~~~  353 (360)
                      ||||.|+|+++++++++++|+++...|.   .|.. .++++.||||++||+....
T Consensus       118 HIci~V~di~sac~~lkekGV~f~Kk~~---dGk~K~iaF~~dpDgywiei~~~s  169 (170)
T KOG2944|consen  118 HICIEVDDINSACERLKEKGVRFKKKLK---DGKMKPIAFLHDPDGYWIEIELES  169 (170)
T ss_pred             eEEEEeCCHHHHHHHHHHhCceeeecCC---CccccceeEEECCCCCeEEEeecC
Confidence            9999999999999999999999766543   3222 6799999999999998653

>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.26  E-value=5.9e-11  Score=96.12  Aligned_cols=103  Identities=20%  Similarity=0.266  Sum_probs=73.0

Q ss_pred             eeceeeecCHHHHHHHhhhcceEEeeeccCCC-ccEEEEEEeCCccc-----c--cCCCCeeEEEEEeCC---HHHHHHH
Q 018138          246 CQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK-NAVLELTYNHGVTE-----Y--DKGNGYAQIAIGTDD---VYKTAEA  314 (360)
Q Consensus       246 ~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~-~~~l~l~~~~~~~~-----~--~~g~g~~hiaf~V~D---l~~~~~~  314 (360)
                      .|+.|.|+|++++.+||++    +||++.... .....+........     .  ...++..|++|.|+|   +++++++
T Consensus         3 ~hv~l~v~d~~~a~~FY~~----~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~f~v~~~~dl~~~~~~   78 (120)
T cd07254           3 FHVALNVDDLEASIAFYSK----LFGVEPTKVRDDYAKFLLEDPRLNFVLNERPGAPGGGLNHLGVQVDSAEEVAEAKAR   78 (120)
T ss_pred             EEEEEEeCCHHHHHHHHHH----HhCCeEecccCCeeEEEecCCceEEEEecCCCCCCCCeeEEEEEeCCHHHHHHHHHH
Confidence            5899999999999999999    999975321 11111111111100     0  111478899999977   7899999


Q ss_pred             HHHcCCeEeeCCcccC-CCCcEEEEEECCCCCeEEEEcC
Q 018138          315 IKLSGGKITREPGPLP-GINTKITACLDPDGWKSVFVDN  352 (360)
Q Consensus       315 l~~~G~~i~~~p~~~~-~~~~~~~~~~DPdG~~iel~~~  352 (360)
                      ++++|+++..+|.... +...+.+|++||+||.|||+..
T Consensus        79 l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  117 (120)
T cd07254          79 AEAAGLPTFKEEDTTCCYAVQDKVWVTDPDGNAWEVFVT  117 (120)
T ss_pred             HHHcCCeEEccCCcccccCCcceEEEECCCCCEEEEEEe
Confidence            9999999887664432 2235789999999999999875

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08354 Glo_EDI_BRP_like_13 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.26  E-value=4.7e-11  Score=96.60  Aligned_cols=102  Identities=21%  Similarity=0.229  Sum_probs=72.8

Q ss_pred             ceeceeeecCHHHHHHHhhhcceEEeeeccCC--CccEEEEEEeCCc---------c-------cccCCCCeeEEEEEe-
Q 018138          245 LCQVMLRVGDLDRAINFYKKYTIAVMGYGPED--KNAVLELTYNHGV---------T-------EYDKGNGYAQIAIGT-  305 (360)
Q Consensus       245 i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~--~~~~l~l~~~~~~---------~-------~~~~g~g~~hiaf~V-  305 (360)
                      +.+|.|.|.|++++.+||++    +|||+...  ......+....+.         .       ......+..|++|.| 
T Consensus         1 ~~~~~l~v~d~~~s~~Fy~~----~lG~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~   76 (122)
T cd08354           1 ILETALYVDDLEAAEAFYED----VLGLELMLKEDRRLAFFWVGGRGMLLLFDPGATSTPGGEIPPHGGSGPGHFAFAIP   76 (122)
T ss_pred             CeEEEEEeCCHHHHHHHHHh----ccCCEEeecCCCceEEEEcCCCcEEEEEecCCcccccCCCCCCCCCCccEEEEEcC
Confidence            46899999999999999999    99987532  1111222111100         0       001124678999998 


Q ss_pred             -CCHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcC
Q 018138          306 -DDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  352 (360)
Q Consensus       306 -~Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  352 (360)
                       +|++++++++.++|+++...+. ... .++.+|++||+|+.||+++.
T Consensus        77 ~~dl~~~~~~l~~~g~~~~~~~~-~~~-~~~~~~~~DP~G~~ie~~~~  122 (122)
T cd08354          77 AEELAEWEAHLEAKGVAIESEVQ-WPR-GGRSLYFRDPDGNLLELATP  122 (122)
T ss_pred             HHHHHHHHHHHHhcCCceecccc-CCC-CeeEEEEECCCCCEEEEecC
Confidence             5899999999999999876554 222 26889999999999999863

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08357 Glo_EDI_BRP_like_18 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.25  E-value=5.5e-11  Score=96.63  Aligned_cols=101  Identities=18%  Similarity=0.185  Sum_probs=69.2

Q ss_pred             eceeeecCHHHHHHHhhhcceEEeeeccCCC----------ccEEEEEEeCCc---ccc----cCCCCeeEEE--EEeCC
Q 018138          247 QVMLRVGDLDRAINFYKKYTIAVMGYGPEDK----------NAVLELTYNHGV---TEY----DKGNGYAQIA--IGTDD  307 (360)
Q Consensus       247 hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~----------~~~l~l~~~~~~---~~~----~~g~g~~hia--f~V~D  307 (360)
                      |+.|.|+|++++++||++    +||+.....          ...+.+......   ...    ....+..|++  |.++|
T Consensus         2 Hi~l~v~Dl~~s~~FY~~----~lG~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~d   77 (125)
T cd08357           2 HLAIPVRDLEAARAFYGD----VLGCKEGRSSETWVDFDFFGHQLVAHLSPNFNADASDNAVDGHPVPVPHFGLILSEEE   77 (125)
T ss_pred             eEEEEeCCHHHHHHHHHH----hcCCEEeeccCCcccccccCcEEEEEeccCCCcccccCCCCCCccCCceEEEEEeHHH
Confidence            899999999999999999    999875321          111111111100   000    0112345665  45689


Q ss_pred             HHHHHHHHHHcCCeEeeCCcccC---CCCcEEEEEECCCCCeEEEEc
Q 018138          308 VYKTAEAIKLSGGKITREPGPLP---GINTKITACLDPDGWKSVFVD  351 (360)
Q Consensus       308 l~~~~~~l~~~G~~i~~~p~~~~---~~~~~~~~~~DPdG~~iel~~  351 (360)
                      +++++++|+++|+++..+|....   .+..+.+||+|||||.|||..
T Consensus        78 v~~~~~~l~~~g~~~~~~p~~~~~~~~~~~~~~~~~DPdG~~iE~~~  124 (125)
T cd08357          78 FDALAERLEAAGVEFLIEPYTRFEGQPGEQETFFLKDPSGNALEFKA  124 (125)
T ss_pred             HHHHHHHHHHCCCcEecCcceeccCCcCceeEEEEECCCCCEEEEee
Confidence            99999999999999998775432   122588999999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=99.20  E-value=1.6e-10  Score=102.02  Aligned_cols=100  Identities=25%  Similarity=0.379  Sum_probs=75.1

Q ss_pred             ceeEEEEEEeC--CHHHHHHHHHHhcCCEEEEEeeCCC--CCeEEEEEeeCCCCceEEEEEEecCCC--C-------CCc
Q 018138          113 RRMLHVVYRVG--DLDKTIKFYTECLGMKLLRKRDIPE--DRYTNAFLGYGPEDSHFVVELTYNYGV--D-------KYD  179 (360)
Q Consensus       113 ~~l~HV~l~V~--Dle~a~~FY~~vLG~~~~~~~~~~~--~~~~~~~l~~g~~~~~~~lel~~~~~~--~-------~~~  179 (360)
                      .+|+||++.|+  |++++++||+++|||+.......++  .......+..+.  ....+++.++...  .       ...
T Consensus         2 ~~iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~~~--g~i~l~L~~~~~~~~~s~~~~fl~~~   79 (191)
T cd07250           2 TRIDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLASPD--GKIRIPLNEPASGKRKSQIQEFLEYY   79 (191)
T ss_pred             ceeeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEECCC--CcEEEEEecCCCCCCccHHHHHHHHh
Confidence            57999999999  9999999999999999887654332  233344554332  3466777764331  1       012


Q ss_pred             CCCcceEEEEEECCHHHHHHHHHHcCCeEecCCee
Q 018138          180 IGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGP  214 (360)
Q Consensus       180 ~g~g~~hi~f~V~Dld~~~~rL~~~G~~~~~~p~~  214 (360)
                      .|.|+.||||.|+|+++++++|+++|+++...|..
T Consensus        80 ~G~Gv~HIAf~vdDI~~~~~~L~~~Gv~~l~~P~~  114 (191)
T cd07250          80 GGAGVQHIALATDDIFATVAALRARGVEFLPIPDN  114 (191)
T ss_pred             CCCceeEEEEECCCHHHHHHHHHHcCCeeccCchh
Confidence            46799999999999999999999999999877643

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=99.18  E-value=1.7e-10  Score=90.33  Aligned_cols=98  Identities=29%  Similarity=0.374  Sum_probs=71.5

Q ss_pred             eceeeecCHHHHHHHhhhcceEEeeeccCCCc-----cEEEEEEeCCcc------cc---cCCCCeeEEEEEeCCHHHHH
Q 018138          247 QVMLRVGDLDRAINFYKKYTIAVMGYGPEDKN-----AVLELTYNHGVT------EY---DKGNGYAQIAIGTDDVYKTA  312 (360)
Q Consensus       247 hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~~-----~~l~l~~~~~~~------~~---~~g~g~~hiaf~V~Dl~~~~  312 (360)
                      |+.+.|+|++++.+||++    +|||+.....     ....+.......      ..   ..+.+..|++|.|+|+++++
T Consensus         1 Hi~i~~~d~~~~~~fy~~----~lg~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~v~~~~~~~   76 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEE----VLGFEVLFRNGNGGAEFAVLGLGGTRLELFEGDEPAPAPSGGGGVHLAFEVDDVDAAY   76 (112)
T ss_pred             CcceeeCCHHHHHHHHHh----ccCCEEEEeeccCCEEEEEEecCCceEEEecCCCCCCcccCCCeeEEEEECCCHHHHH
Confidence            789999999999999999    9998743222     111121110000      01   12457899999999999999


Q ss_pred             HHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEE
Q 018138          313 EAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVF  349 (360)
Q Consensus       313 ~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel  349 (360)
                      ++++++|+.+..++. ......+.++++||+|+.|+|
T Consensus        77 ~~l~~~g~~~~~~~~-~~~~~~~~~~~~Dp~G~~~~~  112 (112)
T cd06587          77 ERLKAAGVEVLGEPR-EEPWGGRVAYFRDPDGNLIEL  112 (112)
T ss_pred             HHHHHcCCcccCCCc-CCCCCcEEEEEECCCCcEEeC
Confidence            999999999888775 222337899999999999985

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd07251 Glo_EDI_BRP_like_10 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.15  E-value=3.6e-10  Score=91.11  Aligned_cols=99  Identities=23%  Similarity=0.291  Sum_probs=69.3

Q ss_pred             ceeeecCHHHHHHHhhhcceEEeeeccCCC-c----------cEEEEEEeCCccc------ccCCCCeeEEEEEe---CC
Q 018138          248 VMLRVGDLDRAINFYKKYTIAVMGYGPEDK-N----------AVLELTYNHGVTE------YDKGNGYAQIAIGT---DD  307 (360)
Q Consensus       248 v~L~V~D~e~a~~FY~~~~~~~lG~~~~~~-~----------~~l~l~~~~~~~~------~~~g~g~~hiaf~V---~D  307 (360)
                      |.|.|+|++++.+||++    +|||+.... .          ..+.+........      ...+.+..|++|.+   +|
T Consensus         2 i~l~v~d~~~a~~FY~~----~lg~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d   77 (121)
T cd07251           2 ITLGVADLARSRAFYEA----LLGWKPSADSNDGVAFFQLGGLVLALFPREELAKDAGVPVPPPGFSGITLAHNVRSEEE   77 (121)
T ss_pred             eeEeeCCHHHHHHHHHH----hcCceecccCCCceEEEEcCCeEEEEecchhhhhhcCCCCCCCCccceEEEEEcCCHHH
Confidence            67999999999999999    999986432 1          1111111100000      01112334566654   68


Q ss_pred             HHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEc
Q 018138          308 VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD  351 (360)
Q Consensus       308 l~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  351 (360)
                      ++++++++++.|+++..++...+++ ++.++++||+||+||+..
T Consensus        78 ~~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DP~Gn~iei~~  120 (121)
T cd07251          78 VDAVLARAAAAGATIVKPPQDVFWG-GYSGYFADPDGHLWEVAH  120 (121)
T ss_pred             HHHHHHHHHhCCCEEecCCccCCCC-ceEEEEECCCCCEEEEee
Confidence            9999999999999999888766654 789999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.14  E-value=3.1e-10  Score=91.35  Aligned_cols=98  Identities=17%  Similarity=0.137  Sum_probs=65.6

Q ss_pred             ceeeecCHHHHHHHhhhcceEEeeeccCCCc-cEEEEEEeCCcc-----cccCCCCeeEEEEEeCCHHHHHHHHHHcCCe
Q 018138          248 VMLRVGDLDRAINFYKKYTIAVMGYGPEDKN-AVLELTYNHGVT-----EYDKGNGYAQIAIGTDDVYKTAEAIKLSGGK  321 (360)
Q Consensus       248 v~L~V~D~e~a~~FY~~~~~~~lG~~~~~~~-~~l~l~~~~~~~-----~~~~g~g~~hiaf~V~Dl~~~~~~l~~~G~~  321 (360)
                      ..|.|+|++++++||++     |||+..... ....+.......     ......+..+++|.|+|+++++++|+++|++
T Consensus         5 ~~l~v~Dl~~s~~FY~~-----LGf~~~~~~~~~~~l~~~~~~l~l~~~~~~~~~~~~~~~~~v~did~~~~~l~~~G~~   79 (113)
T cd08356           5 PFIPAKDFAESKQFYQA-----LGFELEWENDNLAYFRLGNCAFYLQDYYVKDWAENSMLHLEVDDLEAYYEHIKALGLP   79 (113)
T ss_pred             eccccccHHHHHHHHHH-----hCCeeEecCCCEEEEEcCCEEEEeecCCCcccccCCEEEEEECCHHHHHHHHHHcCCc
Confidence            46889999999999974     587643221 122222111000     0011223458899999999999999999987


Q ss_pred             Ee-----eCCcccCCCCcEEEEEECCCCCeEEEEc
Q 018138          322 IT-----REPGPLPGINTKITACLDPDGWKSVFVD  351 (360)
Q Consensus       322 i~-----~~p~~~~~~~~~~~~~~DPdG~~iel~~  351 (360)
                      +.     .++...+++ .+.++|+|||||+|+|.+
T Consensus        80 ~~~~~~~~~~~~~~~g-~r~f~~~DPdGn~~~~~~  113 (113)
T cd08356          80 KKFPGVKLPPITQPWW-GREFFLHDPSGVLWHIGQ  113 (113)
T ss_pred             ccccceecCccccCCC-cEEEEEECCCccEEEeeC
Confidence            53     233333443 699999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins

Probab=99.12  E-value=4.4e-10  Score=91.18  Aligned_cols=100  Identities=21%  Similarity=0.202  Sum_probs=66.8

Q ss_pred             eceeeecCHHHHHHHhhhcceEEeeeccCCCc--cEEEEEEeCCcc------cccCCCCeeEEEEEeCCHHHHHHHHHHc
Q 018138          247 QVMLRVGDLDRAINFYKKYTIAVMGYGPEDKN--AVLELTYNHGVT------EYDKGNGYAQIAIGTDDVYKTAEAIKLS  318 (360)
Q Consensus       247 hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~~--~~l~l~~~~~~~------~~~~g~g~~hiaf~V~Dl~~~~~~l~~~  318 (360)
                      ...|.|+|+++|++||++     |||+.....  .+..+.......      .........|++|.|+|+++++++|+++
T Consensus         5 ~~~l~v~Dl~~s~~FY~~-----lG~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~v~dvd~~~~~l~~~   79 (120)
T cd08350           5 IPNLPSRDLDATEAFYAR-----LGFSVGYRQAAGYMILRRGDLELHFFAHPDLDPATSPFGCCLRLPDVAALHAEFRAA   79 (120)
T ss_pred             cceeEcCCHHHHHHHHHH-----cCCEEEecCCCCEEEEEcCCEEEEEEecCcCCCCCCcceEEEEeCCHHHHHHHHHHh
Confidence            356899999999999984     566532211  122221110000      1112223468999999999999999999


Q ss_pred             CCeEe-------eCCcccCCCCcEEEEEECCCCCeEEEEcC
Q 018138          319 GGKIT-------REPGPLPGINTKITACLDPDGWKSVFVDN  352 (360)
Q Consensus       319 G~~i~-------~~p~~~~~~~~~~~~~~DPdG~~iel~~~  352 (360)
                      |+++.       .++...+++ .+.++|+|||||+|+|.+.
T Consensus        80 G~~~~~~~~~~~~~~~~~~~g-~~~~~~~DPdG~~ie~~~~  119 (120)
T cd08350          80 GLPETGSGIPRITPPEDQPWG-MREFALVDPDGNLLRFGQP  119 (120)
T ss_pred             CccccccCCCcccCCcCCCCc-eeEEEEECCCCCEEEeecC
Confidence            99853       333333443 6899999999999999874

BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=99.05  E-value=3.8e-09  Score=98.21  Aligned_cols=203  Identities=19%  Similarity=0.284  Sum_probs=128.8

Q ss_pred             cceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCC--CC--CcCCCcceEE
Q 018138          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV--DK--YDIGTGFGHF  187 (360)
Q Consensus       112 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~--~~--~~~g~g~~hi  187 (360)
                      ..++.+|.+.|+|.+++..=|-..|||+...+--..  .+ ..| +-|  +  ..+-+......  ..  ..+|++..-+
T Consensus        20 ~~GfeFvEf~~~d~~~~l~~l~~~lGF~~~~~Hrsk--~v-~l~-rQG--d--inlvvn~~~~s~a~~f~~~Hgps~~a~   91 (363)
T COG3185          20 TDGFEFVEFAVPDPQEALGALLGQLGFTAVAKHRSK--AV-TLY-RQG--D--INLVVNAEPDSFAAEFLDKHGPSACAM   91 (363)
T ss_pred             CCceeEEEEecCCHHHHHHHHHHHhCcccccccccc--ce-eEE-EeC--C--EEEEEcCCCcchhhHHHHhcCCchhee
Confidence            678999999999994444444456999987542111  11 122 212  1  23333221111  01  1467888999


Q ss_pred             EEEECCHHHHHHHHHHcCCeEecCCe---e--cC----CCCEEEEEEECCCC-CE---EEEeec--CC-----CCCCcee
Q 018138          188 GIAVEDVAKTVDLVKAKGGKVTREPG---P--VK----GGNTVIAFIEDPDG-YK---FELLER--GP-----TPEPLCQ  247 (360)
Q Consensus       188 ~f~V~Dld~~~~rL~~~G~~~~~~p~---~--~~----~g~~~~~~~~DPdG-~~---iEl~~~--~~-----~~~~i~h  247 (360)
                      +|.|+|...++++.++.|.+....+.   +  .+    -|+. .+|+.|..| .-   .++...  ..     ....|+|
T Consensus        92 a~~V~DA~~A~a~A~a~gA~~~~~~~g~~e~~ipai~giggs-llyfvd~~~~~siyd~~f~~~~~~~~~~~~g~~~IDH  170 (363)
T COG3185          92 AFRVDDAEQALARALALGARTIDTEIGAGEVDIPAIRGIGGS-LLYFVDRYGGRSIYDVEFEPNGAQGASGGVGLTAIDH  170 (363)
T ss_pred             EEeeCCHHHHHHHHHHcCCccccCCCCCccccccceeccCCc-EEEEeccCCCCcccccccccccccccccccCceeech
Confidence            99999999999999999995433222   1  11    1333 689988883 11   122222  11     1248999


Q ss_pred             ceeee--cCHHHHHHHhhhcceEEeeeccCCC------------------ccEEEEEEeCCccc---------ccCCCCe
Q 018138          248 VMLRV--GDLDRAINFYKKYTIAVMGYGPEDK------------------NAVLELTYNHGVTE---------YDKGNGY  298 (360)
Q Consensus       248 v~L~V--~D~e~a~~FY~~~~~~~lG~~~~~~------------------~~~l~l~~~~~~~~---------~~~g~g~  298 (360)
                      +++.|  ..++....||++    +|+|+....                  ...+.+..|....+         ...|.|+
T Consensus       171 l~~nv~~~~md~w~~FY~~----if~~~~~~~fdi~~p~tgl~Sram~Sp~G~vrlplN~s~~~~sqi~efl~~y~G~GI  246 (363)
T COG3185         171 LTHNVKAGQMDTWVLFYES----LFGFREIQYFDIPGPITGLRSRAMVSPCGKVRLPLNESADDKSQIGEFLREYRGEGI  246 (363)
T ss_pred             hhhhcchhhHHHHHHHHHH----HhCccceeeEeccCCcccEEEeeEecCCCcEEeecccCCCchhHHHHHHHHhCCCcc
Confidence            99877  679999999999    999975321                  11122222211110         1247799


Q ss_pred             eEEEEEeCCHHHHHHHHHHcCCeEeeCCc
Q 018138          299 AQIAIGTDDVYKTAEAIKLSGGKITREPG  327 (360)
Q Consensus       299 ~hiaf~V~Dl~~~~~~l~~~G~~i~~~p~  327 (360)
                      +||||.++|+.+++++++++|+++...|.
T Consensus       247 QHIA~~T~dI~~tv~~lr~rG~~fl~ip~  275 (363)
T COG3185         247 QHIAFGTDDIYATVAALRERGVKFLPIPE  275 (363)
T ss_pred             eEEEecccHHHHHHHHHHHcCCccCCCch
Confidence            99999999999999999999999988774

>COG3565 Predicted dioxygenase of extradiol dioxygenase family [General function prediction only]

Probab=98.99  E-value=6.7e-09  Score=81.06  Aligned_cols=117  Identities=28%  Similarity=0.346  Sum_probs=77.2

Q ss_pred             ceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCC--C--cCCCcceE--
Q 018138          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK--Y--DIGTGFGH--  186 (360)
Q Consensus       113 ~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~--~--~~g~g~~h--  186 (360)
                      ..+-|+++.|+|++++++||.++||++.-+..+        .|+.+.--++..++.+........  .  .++....|  
T Consensus         3 ~~~FHLA~pV~Dl~~tr~FYgevlG~~~GRstd--------~wvdfDfyGHQ~v~Hl~~q~~~~~~g~V~~~~v~~pHfG   74 (138)
T COG3565           3 PVPFHLAIPVNDLDETRRFYGEVLGCKEGRSTD--------TWVDFDFYGHQVVAHLTPQPDSQGSGKVDGHGVPPPHFG   74 (138)
T ss_pred             ccceEEeeeccccHHHHhhhhhhcccccccccc--------eEEEeeecccEEEEEecCCcccccCcccCCCCCCCccce
Confidence            457899999999999999999999998865432        222222223334455543221110  1  11222345  


Q ss_pred             EEEEECCHHHHHHHHHHcCCeEecCCeec-CC--CCEEEEEEECCCCCEEEEee
Q 018138          187 FGIAVEDVAKTVDLVKAKGGKVTREPGPV-KG--GNTVIAFIEDPDGYKFELLE  237 (360)
Q Consensus       187 i~f~V~Dld~~~~rL~~~G~~~~~~p~~~-~~--g~~~~~~~~DPdG~~iEl~~  237 (360)
                      +.+.++|.-++.+||+++|+....+|.-. .+  |...-+++.||.||.+|+-.
T Consensus        75 vVl~~edW~alaerlea~gi~~~i~P~vRF~Ge~gEq~TlFl~DP~gN~lEfK~  128 (138)
T COG3565          75 VVLPVEDWFALAERLEAAGIPFHIPPKVRFKGEPGEQRTLFLFDPSGNALEFKG  128 (138)
T ss_pred             EEEEHHHHHHHHHHHHHcCCCcccCceEEecCCccceEEEEEECCCCCeeeeec
Confidence            56677899999999999999977776542 21  33335889999999999854

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=98.97  E-value=3.6e-09  Score=102.33  Aligned_cols=102  Identities=21%  Similarity=0.385  Sum_probs=74.3

Q ss_pred             cccceeEEEEEEeC--CHHHHHHHHHHhcCCEEEEEeeCCCC--CeEEEEEeeCCCCceEEEEEEecCC---CC------
Q 018138          110 SDKRRMLHVVYRVG--DLDKTIKFYTECLGMKLLRKRDIPED--RYTNAFLGYGPEDSHFVVELTYNYG---VD------  176 (360)
Q Consensus       110 ~~~~~l~HV~l~V~--Dle~a~~FY~~vLG~~~~~~~~~~~~--~~~~~~l~~g~~~~~~~lel~~~~~---~~------  176 (360)
                      +.+.+|+||++.|+  |++++++||+++|||++..+.+....  ......+.. + .....|++.++..   ..      
T Consensus       154 ~~~~~iDHv~i~V~~~dl~~~~~fY~~~lGf~~~~~~~~~~~~~~~~s~~~~~-~-~g~~~i~L~ep~~~~~~s~i~~fl  231 (353)
T TIGR01263       154 VGLIAIDHLVGNVYRGQMEPWAEFYEKIFGFREIRSFDIKTEYSALNSIVMAS-P-DGKVKIPLNEPASGKDKSQIEEFL  231 (353)
T ss_pred             CCeEEeeeeEcccCCccHHHHHHHHHHHhCCceeeEEEeccCCccEEEEEEEC-C-CCcEEEEEeccCCCCCCCHHHHHH
Confidence            45789999999999  99999999999999999876543221  221122221 1 2245677776421   11      


Q ss_pred             CCcCCCcceEEEEEECCHHHHHHHHHHcCCeEecCCe
Q 018138          177 KYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPG  213 (360)
Q Consensus       177 ~~~~g~g~~hi~f~V~Dld~~~~rL~~~G~~~~~~p~  213 (360)
                      ....|.|+.||||.|+|+++++++|+++|+++...|.
T Consensus       232 ~~~~g~Gv~HiAf~vdDi~~~~~~l~~~Gv~~l~~P~  268 (353)
T TIGR01263       232 EFYNGAGVQHIALNTDDIVRTVRALRARGVEFLDTPD  268 (353)
T ss_pred             HHcCCCCccEEEEEcCCHHHHHHHHHHcCCccCcCCH
Confidence            1123789999999999999999999999999887763

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

Probab=98.94  E-value=2.3e-09  Score=86.51  Aligned_cols=122  Identities=26%  Similarity=0.447  Sum_probs=74.5

Q ss_pred             ceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCC---eEEEEEeeCCCCceEEEEE--------EecCCCC-CCcC
Q 018138          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDR---YTNAFLGYGPEDSHFVVEL--------TYNYGVD-KYDI  180 (360)
Q Consensus       113 ~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~---~~~~~l~~g~~~~~~~lel--------~~~~~~~-~~~~  180 (360)
                      ++++||.+.|+|++++++||+++||+++..+.......   ....+..............        ....... ....
T Consensus         1 ~~l~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (138)
T COG0346           1 MGIHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGFEGRAGTGFVGDVALGVPG   80 (138)
T ss_pred             CceEEEEEeeCCHhHhHHHHHhhcCCeeeeecccccCCceEEEEEeccCCCCcccceeecccccccccccccceEEeecC
Confidence            47899999999999999999999999998765432221   1112221110000000000        0000000 0001


Q ss_pred             C-CcceEEEEEECC---HHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEee
Q 018138          181 G-TGFGHFGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (360)
Q Consensus       181 g-~g~~hi~f~V~D---ld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~  237 (360)
                      + .+..|+++.+++   ..+....+...|..+...+. ..++.  .+|++||||+.+|+++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~--~~~~~dp~g~~~e~~~  138 (138)
T COG0346          81 GDLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEP-GRGGV--HVYFRDPDGILIELAT  138 (138)
T ss_pred             chhccCceeEecccccccceEEEeeCCCCCEEEeecC-CCcce--EEEEECCCCcEEEeeC
Confidence            1 247899999998   66777777788888765433 22232  6999999999999874

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=98.93  E-value=3.7e-09  Score=92.90  Aligned_cols=102  Identities=38%  Similarity=0.743  Sum_probs=86.0

Q ss_pred             CCCceeceeeecCHHHHHHHhhh---------------------------cceEEeeeccCCCccEEEEEEeCCcccccC
Q 018138          242 PEPLCQVMLRVGDLDRAINFYKK---------------------------YTIAVMGYGPEDKNAVLELTYNHGVTEYDK  294 (360)
Q Consensus       242 ~~~i~hv~L~V~D~e~a~~FY~~---------------------------~~~~~lG~~~~~~~~~l~l~~~~~~~~~~~  294 (360)
                      ..++-|+++.|.|.+++++||++                           |+-+++||.+++....+||+||++...|.-
T Consensus        15 ~~r~LH~VfkVgdr~kti~Fyt~vlgMkvLRheef~egc~aacngpyd~kwSktmvGyGpEdshFViELTYNYgV~~Yel   94 (299)
T KOG2943|consen   15 TRRALHYVFKVGDRAKTIDFYTEVLGMKVLRHEEFEEGCEAACNGPYDGKWSKTMVGYGPEDSHFVIELTYNYGVSKYEL   94 (299)
T ss_pred             chheeeEeEeecchHHHHHHHHHhhcceeeehhhhhhhhhhhcCCCcccchhhhheecCCCcccEEEEEEeccCccceec
Confidence            46888999999999999999993                           445566677777788999999999999999


Q ss_pred             CCCeeEEEEEeCCHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcC
Q 018138          295 GNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  352 (360)
Q Consensus       295 g~g~~hiaf~V~Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  352 (360)
                      |+++.|+.+.++|+-..++.+...|++.         ++.-++.+.||||+.|+|.+.
T Consensus        95 Gndfg~i~I~s~dv~~~ve~v~~p~~~~---------~g~~~~~v~dPdGykF~l~~~  143 (299)
T KOG2943|consen   95 GNDFGGITIASDDVFSKVEKVNAPGGKG---------SGCGIAFVKDPDGYKFYLIDR  143 (299)
T ss_pred             cCCcccEEEeHHHHHHHHHHhcCcCCcc---------cceEEEEEECCCCcEEEEecc
Confidence            9999999999999998888888766531         114578899999999999974

>cd06588 PhnB_like Escherichia coli PhnB and similar proteins; the E

Probab=98.91  E-value=5.3e-08  Score=80.11  Aligned_cols=109  Identities=11%  Similarity=0.134  Sum_probs=74.4

Q ss_pred             EEe-CCHHHHHHHHHHhcCCEEEEEeeCC----------CCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEE
Q 018138          120 YRV-GDLDKTIKFYTECLGMKLLRKRDIP----------EDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFG  188 (360)
Q Consensus       120 l~V-~Dle~a~~FY~~vLG~~~~~~~~~~----------~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~  188 (360)
                      |.+ .|.+++++||+++||+++......+          .+.+..+.+..++.    .+.+......... .+..-.+++
T Consensus         5 L~~~~~~~eAi~FY~~~fg~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g~----~l~~~d~~~~~~~-~~~~~~~l~   79 (128)
T cd06588           5 LWFNGNAEEALEFYQSVFGGEITSLTRYGEGPPPDPEEPEGKVMHAELTIGGQ----RLMASDGGPGFPF-TFGNGISLS   79 (128)
T ss_pred             EeeCCCHHHHHHHHHHHhCCEeEEEEEcCCCCCCCCCCcCCcEEEEEEEECCE----EEEEEcCCCCCCC-CCCCCEEEE
Confidence            667 8999999999999999998765321          12334555555432    3333332211111 122345789


Q ss_pred             EEECC---HHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEE
Q 018138          189 IAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL  235 (360)
Q Consensus       189 f~V~D---ld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl  235 (360)
                      +.|+|   +++++++|.+.| ++..+|...++|.+ ..+++||+|+.|+|
T Consensus        80 i~~~~~e~v~~~~~~l~~~g-~~~~~~~~~~~g~~-~~~v~Dp~G~~W~i  127 (128)
T cd06588          80 VECDSEEEADRLFEALSEGG-TVLMPLQKTFWSPL-FGWVTDRFGVSWQI  127 (128)
T ss_pred             EECCCHHHHHHHHHHHhcCC-eEeccchhcCcccc-cEEEECCCCCEEEe
Confidence            99886   778889976655 88888888888865 58999999999987

coli phnB gene is found next to an operon involved in the cleavage of carbon-phosphorus bonds in unactivated alkylphosphonates. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to

>COG2764 PhnB Uncharacterized protein conserved in bacteria [Function unknown]

Probab=98.88  E-value=1.1e-07  Score=78.45  Aligned_cols=116  Identities=20%  Similarity=0.213  Sum_probs=86.5

Q ss_pred             EEeC-CHHHHHHHHHHhcCCEEEEEeeCCC----------CCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCC-cceEE
Q 018138          120 YRVG-DLDKTIKFYTECLGMKLLRKRDIPE----------DRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGT-GFGHF  187 (360)
Q Consensus       120 l~V~-Dle~a~~FY~~vLG~~~~~~~~~~~----------~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~-g~~hi  187 (360)
                      |..+ |.+++++||+++||.++..+...++          +..-.+-|.++..    .|-+....+......+. .-.-|
T Consensus         6 l~f~gn~~~Al~fY~~vFgae~~~~~~~~d~~~~~~~~~~~~i~HA~l~i~g~----~im~sd~~~~~~~~~~~~~s~~l   81 (136)
T COG2764           6 LFFNGNAREALAFYKEVFGAEELKRVPFGDMPSSAGEPPGGRIMHAELRIGGS----TIMLSDAFPDMGATEGGGTSLSL   81 (136)
T ss_pred             EEECCCHHHHHHHHHHHhCceEEEEEEcCccCccccccccCceEEEEEEECCE----EEEEecCCCccCcccCCCeeEEE
Confidence            7788 9999999999999999998776666          4556666766632    23332221111112222 23457


Q ss_pred             EEEECCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCC
Q 018138          188 GIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (360)
Q Consensus       188 ~f~V~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~  240 (360)
                      .+.++|++++++++.+.|+++..++....+|.+ +..++||.|+.|-|....+
T Consensus        82 ~~~~~d~da~f~~a~~aGa~v~mpl~~~fwG~r-~G~v~D~fGv~W~l~~~~~  133 (136)
T COG2764          82 DLYVEDVDAVFERAAAAGATVVMPLEDTFWGDR-YGQVTDPFGVVWMLNTPVE  133 (136)
T ss_pred             EEEehHHHHHHHHHHhcCCeEEecchhcCcccc-eEEEECCCCCEEEEecCcc
Confidence            788889999999999999999999999999976 5889999999999987654

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=98.85  E-value=7.4e-09  Score=82.75  Aligned_cols=77  Identities=27%  Similarity=0.370  Sum_probs=58.3

Q ss_pred             eeceeeecCHHHHHHHhhhcceEEeeeccCC------C------------ccEEEEEEeCCccc--ccCCCCeeEEEEEe
Q 018138          246 CQVMLRVGDLDRAINFYKKYTIAVMGYGPED------K------------NAVLELTYNHGVTE--YDKGNGYAQIAIGT  305 (360)
Q Consensus       246 ~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~------~------------~~~l~l~~~~~~~~--~~~g~g~~hiaf~V  305 (360)
                      +||.+.|+|+++|.+||++    +||+....      .            ...+||........  ...+.|++|+||.|
T Consensus         1 dHv~i~V~Dl~~a~~~~~~----~lG~~~~~~~~~~~~~v~~~~~~~~~~~~~iELi~p~~~~~~~~~~~~gi~Hia~~v   76 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCD----VLGFEPWERYRDEPQGVRVAFLYLGDGPVQIELIQPLDGDSPLDRGGGGIHHIAFEV   76 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHH----CTTHEEEEEEEEGCTTEEEEEEEETTETEEEEEEEESSTTCHHHHTSSEEEEEEEEE
T ss_pred             CEEEEEcCCHHHHHHHHHH----hhCCcEEEEEecCCCCEEEEEEEeCCCcEEEEEEEeCCCCcccccCCCCEEEEEEEe
Confidence            5999999999999999999    88875311      0            13455554333221  23678999999999


Q ss_pred             CCHHHHHHHHHHcCCeEeeCC
Q 018138          306 DDVYKTAEAIKLSGGKITREP  326 (360)
Q Consensus       306 ~Dl~~~~~~l~~~G~~i~~~p  326 (360)
                      +|++++.++|+++|+++...+
T Consensus        77 ~D~d~~~~~l~~~G~~~~~~~   97 (109)
T PF13669_consen   77 DDLDAAIARLEAQGFRVLDEG   97 (109)
T ss_dssp             SHHHHHHHHHHHTTECEEECE
T ss_pred             CCHHHHHHHHHHCCCEEcccC
Confidence            999999999999999988765

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=98.83  E-value=5.6e-08  Score=84.52  Aligned_cols=145  Identities=22%  Similarity=0.300  Sum_probs=84.2

Q ss_pred             eEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCC--C----C------CcCCC
Q 018138          115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV--D----K------YDIGT  182 (360)
Q Consensus       115 l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~--~----~------~~~g~  182 (360)
                      |+|+++.|+|++++.++|++.|||.+......+..+.....+.+++.    .||+....+.  .    .      ...+.
T Consensus         1 lDH~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~~~GT~N~li~f~~~----YlEli~i~~~~~~~~~~~~~~~~~~~~~~   76 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFEQRLGFTVTPGGEHPGWGTANALIPFGDG----YLELIAIDPEAPAPDRGRWFGLDRLAGGE   76 (175)
T ss_dssp             EEEEEEE-TTGGG----GGGS--S--EEEEE-TTT-EEEEEEE-SSS----EEEEEEES-HHHSTGGGT-TTTHHHHT--
T ss_pred             CCEEEEEcCCHHHHHHhhhhcceEeecCCCcCCCCccEEEEEeeCCc----eEEEEEeCCcccccccccceechhhcCCC
Confidence            68999999999999999988899999987766654555666666542    7888763211  0    0      01467


Q ss_pred             cceEEEEEECCHHHHHHHHHHcCCeEecCCeecCCCC--EEEEEEECC----CCCEEEEeecCC-C---------CCCce
Q 018138          183 GFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGN--TVIAFIEDP----DGYKFELLERGP-T---------PEPLC  246 (360)
Q Consensus       183 g~~hi~f~V~Dld~~~~rL~~~G~~~~~~p~~~~~g~--~~~~~~~DP----dG~~iEl~~~~~-~---------~~~i~  246 (360)
                      |+.++|+.++|+++..+++++.|+... .+...+++.  ...+++.++    .+..-.+++... .         ..+|.
T Consensus        77 g~~~~~l~t~d~~~~~~~l~~~G~~~~-~r~~~dG~~~~w~~~~~~~~~~p~~~~~Pf~i~~~~~~~~~~~h~ng~~~i~  155 (175)
T PF13468_consen   77 GLYGWALRTDDIEAVAARLRAAGLDAG-SRVRPDGGDLRWRLAFPEDGALPFGGLLPFFIQWETPHPEWARHPNGALGIT  155 (175)
T ss_dssp             EEEEEEEE-S-HHHHHHHHHTTT-EEE-EEEEEEE-EEEEEEEEEE-SS---SS---EEEEESS-CCHHTTT--TTEEEE
T ss_pred             CeEEEEEecCCHHHHHHHHHhcCCCCC-CcCcCCCCcceEEEEEeCCcccccCCCCcEEEEeCCCCcccccCCCccceEE
Confidence            899999999999999999999998621 111122221  124555554    244555553322 1         23799


Q ss_pred             eceeeecCHHHHHHHhhh
Q 018138          247 QVMLRVGDLDRAINFYKK  264 (360)
Q Consensus       247 hv~L~V~D~e~a~~FY~~  264 (360)
                      +|.+.+.|.+++.++|.+
T Consensus       156 ~v~i~~~d~~~~~~~~~~  173 (175)
T PF13468_consen  156 RVVIAVPDPDAAAARYAR  173 (175)
T ss_dssp             EEEEEETTHHHHHHHHHH
T ss_pred             EEEEEeCCHHHHHHHHHh
Confidence            999999999999999986

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=98.74  E-value=5.5e-08  Score=94.26  Aligned_cols=100  Identities=17%  Similarity=0.234  Sum_probs=74.8

Q ss_pred             ccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCC-----CeEEEEEeeCCCCceEEEEEEecCCC----C-----
Q 018138          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPED-----RYTNAFLGYGPEDSHFVVELTYNYGV----D-----  176 (360)
Q Consensus       111 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~-----~~~~~~l~~g~~~~~~~lel~~~~~~----~-----  176 (360)
                      .+.+|+||++.|++++++..||+++|||+..+..+.++.     ..+...+..++  ....++|.++...    +     
T Consensus       177 gl~~IDHi~iaV~~ld~a~~fY~~vlGf~~~~~~d~~~i~~~~sgl~S~vl~sp~--g~v~ipLnEP~~~~~~~SqI~eF  254 (398)
T PLN02875        177 GLRRLDHAVGNVPNLLPAVNYIAGFTGFHEFAEFTAEDVGTVDSGLNSMVLASNN--EMVLLPLNEPTFGTKRKSQIQTY  254 (398)
T ss_pred             CcceeCcceechhhHHHHHHHHHHhcCCeeeeeeccccccccccceEEEEEEcCC--CcEEEEeccCCCCCCCcChHHHH
Confidence            467999999999999999999999999998865443221     23445554433  2456777765321    1     


Q ss_pred             -CCcCCCcceEEEEEECCHHHHHHHHHHc----CCeEecCC
Q 018138          177 -KYDIGTGFGHFGIAVEDVAKTVDLVKAK----GGKVTREP  212 (360)
Q Consensus       177 -~~~~g~g~~hi~f~V~Dld~~~~rL~~~----G~~~~~~p  212 (360)
                       ....|.|++||||.|+|+.+++++|+++    |++++..|
T Consensus       255 L~~~~G~GIQHIAl~tdDI~~av~~Lra~~~~~Gv~fL~~P  295 (398)
T PLN02875        255 LEHNEGPGLQHLALKSDDIFGTLREMRARSHIGGFEFMPPP  295 (398)
T ss_pred             HHhcCCCCeeEEEeecCCHHHHHHHHHhccccCCeecCCCC
Confidence             1224689999999999999999999999    99988754

>COG3607 Predicted lactoylglutathione lyase [General function prediction only]

Probab=98.70  E-value=5.6e-08  Score=77.31  Aligned_cols=100  Identities=22%  Similarity=0.247  Sum_probs=69.6

Q ss_pred             CceeceeeecCHHHHHHHhhhcceEEeeeccCCC-------------ccEEEEEEeCC-------cccccCCCCeeEEEE
Q 018138          244 PLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK-------------NAVLELTYNHG-------VTEYDKGNGYAQIAI  303 (360)
Q Consensus       244 ~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~-------------~~~l~l~~~~~-------~~~~~~g~g~~hiaf  303 (360)
                      ++..|.|.|+|++++.+||+     -+||+....             ...+-|.....       .........-..++|
T Consensus         3 ~mIFvNLPVkDL~~S~~Fy~-----alGfk~Npq~sde~a~~mi~~~ni~vMLL~~~~fq~F~~~~i~dt~~s~evli~l   77 (133)
T COG3607           3 QMIFVNLPVKDLEASKAFYT-----ALGFKFNPQFSDEDAACMIISDNIFVMLLEEARFQTFTKRQIADTTKSREVLISL   77 (133)
T ss_pred             eEEEEecchhhHHHHHHHHH-----HhCcccCCCcccccceeEEEeccEEEEEeccHHhhhhcccccccccCCceEEEEe
Confidence            45688999999999999999     588875321             11111111100       001112334567888


Q ss_pred             EeC---CHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEE
Q 018138          304 GTD---DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFV  350 (360)
Q Consensus       304 ~V~---Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~  350 (360)
                      .+.   ++++.++++.++|++...++..+..  -+...|.|||||.||++
T Consensus        78 s~~s~eevd~~v~ka~eaGGk~~~~~~d~gf--MYg~~fqDpDGh~wE~l  125 (133)
T COG3607          78 SAGSREEVDELVDKALEAGGKPANEPQDEGF--MYGRSFQDPDGHVWEFL  125 (133)
T ss_pred             ccCcHHHHHHHHHHHHHcCCCCCCCcccccc--ccceeeeCCCCCeEEEE
Confidence            884   6899999999999999888876665  34567899999999986

>COG3607 Predicted lactoylglutathione lyase [General function prediction only]

Probab=98.64  E-value=6.3e-07  Score=71.36  Aligned_cols=117  Identities=25%  Similarity=0.324  Sum_probs=73.4

Q ss_pred             eeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCC-------CCcCCCcceE
Q 018138          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD-------KYDIGTGFGH  186 (360)
Q Consensus       114 ~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~-------~~~~g~g~~h  186 (360)
                      +.--|.|.|+|++++.+||+. |||+...+..  ++. ..+++- ++   .+.+-|.....-.       .......-.-
T Consensus         3 ~mIFvNLPVkDL~~S~~Fy~a-lGfk~Npq~s--de~-a~~mi~-~~---ni~vMLL~~~~fq~F~~~~i~dt~~s~evl   74 (133)
T COG3607           3 QMIFVNLPVKDLEASKAFYTA-LGFKFNPQFS--DED-AACMII-SD---NIFVMLLEEARFQTFTKRQIADTTKSREVL   74 (133)
T ss_pred             eEEEEecchhhHHHHHHHHHH-hCcccCCCcc--ccc-ceeEEE-ec---cEEEEEeccHHhhhhcccccccccCCceEE
Confidence            345577999999999999986 9999875432  222 123322 22   1222232211100       0011112344


Q ss_pred             EEEEEC---CHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCC
Q 018138          187 FGIAVE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (360)
Q Consensus       187 i~f~V~---Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~  240 (360)
                      +++.+.   ++|+++++.+++|+++..++...  |..+..-|.|||||.||++.-.+
T Consensus        75 i~ls~~s~eevd~~v~ka~eaGGk~~~~~~d~--gfMYg~~fqDpDGh~wE~l~m~~  129 (133)
T COG3607          75 ISLSAGSREEVDELVDKALEAGGKPANEPQDE--GFMYGRSFQDPDGHVWEFLWMDP  129 (133)
T ss_pred             EEeccCcHHHHHHHHHHHHHcCCCCCCCcccc--ccccceeeeCCCCCeEEEEEeCH
Confidence            778775   49999999999999997766544  33334779999999999987543

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=98.60  E-value=2.3e-07  Score=83.75  Aligned_cols=105  Identities=19%  Similarity=0.231  Sum_probs=78.4

Q ss_pred             CCCCceeceeeecCHHHHHHHhhhcceEEeeeccCCCc-----------cEEEEEEeCCcc-cccCCCCeeEEEEEeC--
Q 018138          241 TPEPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDKN-----------AVLELTYNHGVT-EYDKGNGYAQIAIGTD--  306 (360)
Q Consensus       241 ~~~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~~-----------~~l~l~~~~~~~-~~~~g~g~~hiaf~V~--  306 (360)
                      .+..++.|.|.|+|++++..||++    ++|+.+....           ..+.|....... ..+...|+-|+||-++  
T Consensus         7 ~~~~v~~v~L~vrdL~~~~~FY~~----ilGL~v~~~~~~~v~L~vgg~~LL~L~q~~~a~~~~~~~aGLyH~AfLlP~r   82 (265)
T COG2514           7 TPTFVGAVTLNVRDLDSMTSFYQE----ILGLQVLEETDGSVTLGVGGTPLLTLEQFPDARRPPPRAAGLYHTAFLLPTR   82 (265)
T ss_pred             CCcEEEEEEEEeccHHHHHHHHHH----hhCCeeeeccCceEEEeeCCEEEEEEEeCCCCCCCCccccceeeeeeecCCH
Confidence            356788999999999999999999    9999864321           122222222221 1234579999999996  


Q ss_pred             -CHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcC
Q 018138          307 -DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  352 (360)
Q Consensus       307 -Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  352 (360)
                       |+..+..++...|..+. +..+|..  .--+||.||+||-||+.-+
T Consensus        83 ~~L~~~l~hl~~~~~~l~-Ga~DH~v--SEAlYl~DPEGNGIEiYaD  126 (265)
T COG2514          83 EDLARVLNHLAEEGIPLV-GASDHLV--SEALYLEDPEGNGIEIYAD  126 (265)
T ss_pred             HHHHHHHHHHHhcCCccc-ccCcchh--heeeeecCCCCCeEEEEec
Confidence             57788899999999876 5556665  5679999999999999876

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=98.51  E-value=2.7e-07  Score=81.45  Aligned_cols=81  Identities=27%  Similarity=0.443  Sum_probs=59.8

Q ss_pred             CCceeceeeec--CHHHHHHHhhhcceEEeeeccCCC--------------------ccEEEEEEeCC--cc-------c
Q 018138          243 EPLCQVMLRVG--DLDRAINFYKKYTIAVMGYGPEDK--------------------NAVLELTYNHG--VT-------E  291 (360)
Q Consensus       243 ~~i~hv~L~V~--D~e~a~~FY~~~~~~~lG~~~~~~--------------------~~~l~l~~~~~--~~-------~  291 (360)
                      .+++||.+.|.  |++++.+||++    +|||+....                    ...+++.....  ..       .
T Consensus         2 ~~iDHv~i~V~~~dl~~a~~fY~~----~LGf~~~~~~~~~~~~~~~~s~~l~~~~g~i~l~L~~~~~~~~~s~~~~fl~   77 (191)
T cd07250           2 TRIDHVVGNVPDGEMDSWVDFYRK----VLGFHRFWSFDIEDPYSGLRSRVLASPDGKIRIPLNEPASGKRKSQIQEFLE   77 (191)
T ss_pred             ceeeEEEeecChhHHHHHHHHHHH----hhCCceeeEEccCcCcccEEEEEEECCCCcEEEEEecCCCCCCccHHHHHHH
Confidence            36899999999  99999999999    999864210                    01112221111  00       1


Q ss_pred             ccCCCCeeEEEEEeCCHHHHHHHHHHcCCeEeeCCc
Q 018138          292 YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPG  327 (360)
Q Consensus       292 ~~~g~g~~hiaf~V~Dl~~~~~~l~~~G~~i~~~p~  327 (360)
                      .+.|.|++|+||.|+|+++++++|+++|+++...|.
T Consensus        78 ~~~G~Gv~HIAf~vdDI~~~~~~L~~~Gv~~l~~P~  113 (191)
T cd07250          78 YYGGAGVQHIALATDDIFATVAALRARGVEFLPIPD  113 (191)
T ss_pred             HhCCCceeEEEEECCCHHHHHHHHHHcCCeeccCch
Confidence            124689999999999999999999999999998774

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>PF14506 CppA_N: CppA N-terminal; PDB: 3E0R_D

Probab=98.44  E-value=1.3e-05  Score=63.60  Aligned_cols=113  Identities=26%  Similarity=0.360  Sum_probs=62.9

Q ss_pred             EEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEECCHHH
Q 018138          117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAK  196 (360)
Q Consensus       117 HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~Dld~  196 (360)
                      +-+|+|.|-+..++||+++|||++.....      ..++++.......+.||-.+............++++.+.|++..+
T Consensus         3 ~PvlRVnnR~~ni~FY~~~LGfkll~EEn------a~a~lg~~~~~erlvlEESP~~rtr~V~G~KKl~~ivIkv~~~~E   76 (125)
T PF14506_consen    3 IPVLRVNNRDLNIDFYQKTLGFKLLSEEN------ALAILGDQQKEERLVLEESPSMRTRAVEGPKKLNRIVIKVPNPKE   76 (125)
T ss_dssp             EEEEEESSHHHHHHHHTTTT--EEEEEET------TEEEEE-TT--EEEEEEE--TTT-B--SSS-SEEEEEEEESSHHH
T ss_pred             CceEEEcCHHHhHHHHHhccCcEEeeccc------cEEEecCCCCceEEEEecCCccccccccCcceeeEEEEEcCCHHH
Confidence            45799999999999999999999987643      246776544444555555443332233334478999999998665


Q ss_pred             HHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecC
Q 018138          197 TVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (360)
Q Consensus       197 ~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~  239 (360)
                       .+.|.++|.++..   -+.+...+.+-..+|+|..|.|....
T Consensus        77 -Ie~LLar~~~~~~---l~kg~~gyAfe~vSPEgd~~llhaEd  115 (125)
T PF14506_consen   77 -IEALLARGAQYDR---LYKGKNGYAFEAVSPEGDRFLLHAED  115 (125)
T ss_dssp             -HHHHHHC-S--SE---EEE-SSSEEEEEE-TT--EEEEE--S
T ss_pred             -HHHHHhcccccce---eEEcCCceEEEEECCCCCEEEEEEcC
Confidence             4455566655332   12222223466689999999988654

>PRK01037 trmD tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein; Reviewed

Probab=98.42  E-value=2e-06  Score=80.97  Aligned_cols=106  Identities=19%  Similarity=0.285  Sum_probs=71.5

Q ss_pred             ceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEEC
Q 018138          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVE  192 (360)
Q Consensus       113 ~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~  192 (360)
                      -+.-||+|.|+|++++++||+++||+.. .    .++.   ++ ..+  ..-+.+-+.+. +.    ....-.-+|+.++
T Consensus       246 ~~~IfVNLpV~DL~rS~~FYt~LF~~n~-F----sde~---a~-cm~--dtI~vMllt~~-D~----~~~~evLl~Ls~~  309 (357)
T PRK01037        246 PKTFSVVLEVQDLRRAKKFYSKMFGLEC-W----DGDK---LF-LLG--KTSLYLQQTKA-EK----KNRGTTTLSLELE  309 (357)
T ss_pred             CceEEEEeeeCCHHHHHHHHHHHhCCCC-C----CCCc---cc-ccc--CcEEEEEecCC-CC----CCcceEEEEeccC
Confidence            5667999999999999999999988874 2    2222   11 112  22233333333 11    1223345788887


Q ss_pred             C---HHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeec
Q 018138          193 D---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (360)
Q Consensus       193 D---ld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~  238 (360)
                      +   +|++++++.++|++...+|.++..    .--|.||||+.||++..
T Consensus       310 Sre~VD~lv~~A~aaGG~~~~~~~D~Gf----~rsf~D~DGH~WEi~~~  354 (357)
T PRK01037        310 CEHDFVRFLRRWEMLGGELGEQADGHFP----LRLVFDLDGHIWVVSCV  354 (357)
T ss_pred             CHHHHHHHHHHHHHcCCCCCCCcccccC----cceeECCCCCEEEEEEE
Confidence            4   999999999999987666665544    24589999999999864

>COG3565 Predicted dioxygenase of extradiol dioxygenase family [General function prediction only]

Probab=98.35  E-value=3.4e-06  Score=66.09  Aligned_cols=105  Identities=18%  Similarity=0.281  Sum_probs=72.1

Q ss_pred             CceeceeeecCHHHHHHHhhhcceEEeeeccCCC-ccEEEEEEeCCcc-----c----cc----CCCC--eeE--EEEEe
Q 018138          244 PLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK-NAVLELTYNHGVT-----E----YD----KGNG--YAQ--IAIGT  305 (360)
Q Consensus       244 ~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~-~~~l~l~~~~~~~-----~----~~----~g~g--~~h--iaf~V  305 (360)
                      .+-|..+.|+|++++++||.+    +||.+.... +.++.+..-....     .    ..    .+.+  ..|  +.|.+
T Consensus         4 ~~FHLA~pV~Dl~~tr~FYge----vlG~~~GRstd~wvdfDfyGHQ~v~Hl~~q~~~~~~g~V~~~~v~~pHfGvVl~~   79 (138)
T COG3565           4 VPFHLAIPVNDLDETRRFYGE----VLGCKEGRSTDTWVDFDFYGHQVVAHLTPQPDSQGSGKVDGHGVPPPHFGVVLPV   79 (138)
T ss_pred             cceEEeeeccccHHHHhhhhh----hcccccccccceEEEeeecccEEEEEecCCcccccCcccCCCCCCCccceEEEEH
Confidence            356899999999999999999    999876532 4455554321110     0    00    1111  223  44566


Q ss_pred             CCHHHHHHHHHHcCCeEeeCCccc---CCCCcEEEEEECCCCCeEEEEcC
Q 018138          306 DDVYKTAEAIKLSGGKITREPGPL---PGINTKITACLDPDGWKSVFVDN  352 (360)
Q Consensus       306 ~Dl~~~~~~l~~~G~~i~~~p~~~---~~~~~~~~~~~DPdG~~iel~~~  352 (360)
                      +|--+..++|+++|+....+|.-.   ..+-.+..+++||.||.+|+-.-
T Consensus        80 edW~alaerlea~gi~~~i~P~vRF~Ge~gEq~TlFl~DP~gN~lEfK~f  129 (138)
T COG3565          80 EDWFALAERLEAAGIPFHIPPKVRFKGEPGEQRTLFLFDPSGNALEFKGF  129 (138)
T ss_pred             HHHHHHHHHHHHcCCCcccCceEEecCCccceEEEEEECCCCCeeeeecc
Confidence            888899999999999988777421   11236889999999999998653

>cd06588 PhnB_like Escherichia coli PhnB and similar proteins; the E

Probab=98.32  E-value=3.3e-06  Score=69.37  Aligned_cols=96  Identities=17%  Similarity=0.108  Sum_probs=63.6

Q ss_pred             eeee-cCHHHHHHHhhhcceEEeeeccCCC---------------c--cEEEEEEeCCc-------cccc-CCCCeeEEE
Q 018138          249 MLRV-GDLDRAINFYKKYTIAVMGYGPEDK---------------N--AVLELTYNHGV-------TEYD-KGNGYAQIA  302 (360)
Q Consensus       249 ~L~V-~D~e~a~~FY~~~~~~~lG~~~~~~---------------~--~~l~l~~~~~~-------~~~~-~g~g~~hia  302 (360)
                      .|.+ .|.++|++||++    +||.+....               +  ...++......       .... .+....+++
T Consensus         4 ~L~~~~~~~eAi~FY~~----~fg~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g~~l~~~d~~~~~~~~~~~~~~l~   79 (128)
T cd06588           4 YLWFNGNAEEALEFYQS----VFGGEITSLTRYGEGPPPDPEEPEGKVMHAELTIGGQRLMASDGGPGFPFTFGNGISLS   79 (128)
T ss_pred             EEeeCCCHHHHHHHHHH----HhCCEeEEEEEcCCCCCCCCCCcCCcEEEEEEEECCEEEEEEcCCCCCCCCCCCCEEEE
Confidence            4566 999999999998    888653210               0  12222211100       0011 122345788


Q ss_pred             EEeCC---HHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEE
Q 018138          303 IGTDD---VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFV  350 (360)
Q Consensus       303 f~V~D---l~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~  350 (360)
                      +.|+|   +++++++|.+.| ++..++...+++ .+..+++||+|+.|+|.
T Consensus        80 i~~~~~e~v~~~~~~l~~~g-~~~~~~~~~~~g-~~~~~v~Dp~G~~W~i~  128 (128)
T cd06588          80 VECDSEEEADRLFEALSEGG-TVLMPLQKTFWS-PLFGWVTDRFGVSWQIN  128 (128)
T ss_pred             EECCCHHHHHHHHHHHhcCC-eEeccchhcCcc-cccEEEECCCCCEEEeC
Confidence            88876   778889987655 888888887775 68999999999999873

coli phnB gene is found next to an operon involved in the cleavage of carbon-phosphorus bonds in unactivated alkylphosphonates. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to

>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

Probab=98.32  E-value=5.4e-07  Score=72.43  Aligned_cols=101  Identities=24%  Similarity=0.267  Sum_probs=68.1

Q ss_pred             CceeceeeecCHHHHHHHhhhcceEEeeeccCCCcc--------EEEEEEeCC--------c--------cc--------
Q 018138          244 PLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDKNA--------VLELTYNHG--------V--------TE--------  291 (360)
Q Consensus       244 ~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~~~--------~l~l~~~~~--------~--------~~--------  291 (360)
                      ++.||.|.|+|++++++||++    +||+.......        ...+.....        .        ..        
T Consensus         2 ~l~hv~l~v~dl~~s~~FY~~----~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (138)
T COG0346           2 GIHHVTLAVPDLEASIDFYTD----VLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGFEGRAGTGFVGDVALG   77 (138)
T ss_pred             ceEEEEEeeCCHhHhHHHHHh----hcCCeeeeecccccCCceEEEEEeccCCCCcccceeecccccccccccccceEEe
Confidence            578999999999999999999    99987532110        111110000        0        00        


Q ss_pred             ccCC-CCeeEEEEEeCC---HHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEc
Q 018138          292 YDKG-NGYAQIAIGTDD---VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD  351 (360)
Q Consensus       292 ~~~g-~g~~hiaf~V~D---l~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  351 (360)
                      ...+ .+..|+++.+++   ...........|..+...+. ...  +..+|++||||+.||+++
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~--~~~~~~~dp~g~~~e~~~  138 (138)
T COG0346          78 VPGGDLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEP-GRG--GVHVYFRDPDGILIELAT  138 (138)
T ss_pred             ecCchhccCceeEecccccccceEEEeeCCCCCEEEeecC-CCc--ceEEEEECCCCcEEEeeC
Confidence            0011 246899999988   66777778888888766554 323  338999999999999974

>PRK10148 hypothetical protein; Provisional

Probab=98.20  E-value=0.00015  Score=61.21  Aligned_cols=116  Identities=16%  Similarity=0.142  Sum_probs=77.3

Q ss_pred             EEEeC-CHHHHHHHHHHhcCCEEEEEee---C-----------------CCCCeEEEEEeeCCCCceEEEEEEecCCCCC
Q 018138          119 VYRVG-DLDKTIKFYTECLGMKLLRKRD---I-----------------PEDRYTNAFLGYGPEDSHFVVELTYNYGVDK  177 (360)
Q Consensus       119 ~l~V~-Dle~a~~FY~~vLG~~~~~~~~---~-----------------~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~  177 (360)
                      -|... |.+++.+||+++||.++.....   .                 +++.+..+-|.+++.    .|-+..... ..
T Consensus         6 yL~f~g~a~eAi~FY~~~Fgae~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Ha~l~i~g~----~lm~sD~~~-~~   80 (147)
T PRK10148          6 YLSFAGNCADAIAYYQQTLGAELLYKISFGEMPKSAQDSEEGCPSGMQFPDTAIAHANVRIAGS----DIMMSDAIP-SG   80 (147)
T ss_pred             EEEeCCCHHHHHHHHHHHhCCEEEEEEEcccCCccccccccCCCccccCcCCcEEEEEEEECCE----EEEEECCCC-Cc
Confidence            35664 8999999999999998865431   1                 123445566666532    233322111 11


Q ss_pred             CcCCCcceEEEEEECCHHH---HHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCCCC
Q 018138          178 YDIGTGFGHFGIAVEDVAK---TVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTP  242 (360)
Q Consensus       178 ~~~g~g~~hi~f~V~Dld~---~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~~~  242 (360)
                      ...+ .-.++++.++|.++   ++++| +.|+++..++....+|.+ +..++||-|+.|.|...+..|
T Consensus        81 ~~~~-~~~~l~l~~~d~ee~~~~~~aL-a~gg~v~mpl~~~~wg~~-~g~v~D~fGi~W~l~~~~~~~  145 (147)
T PRK10148         81 KAHY-SGFTLVLDTQDVEEGKRWFDNL-AANGKIEMAWQETFWAHG-FGKVTDKFGVPWMINVVKQQP  145 (147)
T ss_pred             CCCC-CeEEEEEECCCHHHHHHHHHHh-hCCCEEEecchhcchhhc-cEEEECCCCCEEEEEecCCCC
Confidence            1112 23467888888776   45555 699999999998888865 689999999999998776544

>PRK01037 trmD tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein; Reviewed

Probab=98.14  E-value=1.4e-05  Score=75.32  Aligned_cols=100  Identities=21%  Similarity=0.253  Sum_probs=69.3

Q ss_pred             CCceeceeeecCHHHHHHHhhhcceEEeeeccCCCccE-EEEEEe---C-CcccccCCCCeeEEEEEeC---CHHHHHHH
Q 018138          243 EPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDKNAV-LELTYN---H-GVTEYDKGNGYAQIAIGTD---DVYKTAEA  314 (360)
Q Consensus       243 ~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~~~~-l~l~~~---~-~~~~~~~g~g~~hiaf~V~---Dl~~~~~~  314 (360)
                      .+..||.|.|+|+++|++||++    +|++.. -.+.. .-+..+   . -..+......-.-+++.++   ++|+.+++
T Consensus       246 ~~~IfVNLpV~DL~rS~~FYt~----LF~~n~-Fsde~a~cm~dtI~vMllt~~D~~~~~evLl~Ls~~Sre~VD~lv~~  320 (357)
T PRK01037        246 PKTFSVVLEVQDLRRAKKFYSK----MFGLEC-WDGDKLFLLGKTSLYLQQTKAEKKNRGTTTLSLELECEHDFVRFLRR  320 (357)
T ss_pred             CceEEEEeeeCCHHHHHHHHHH----HhCCCC-CCCCccccccCcEEEEEecCCCCCCcceEEEEeccCCHHHHHHHHHH
Confidence            5778999999999999999999    777753 11111 111000   0 0000112334567888886   58899999


Q ss_pred             HHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEc
Q 018138          315 IKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD  351 (360)
Q Consensus       315 l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  351 (360)
                      +.++|++...++.+++.    .--|.|||||.||++=
T Consensus       321 A~aaGG~~~~~~~D~Gf----~rsf~D~DGH~WEi~~  353 (357)
T PRK01037        321 WEMLGGELGEQADGHFP----LRLVFDLDGHIWVVSC  353 (357)
T ss_pred             HHHcCCCCCCCcccccC----cceeECCCCCEEEEEE
Confidence            99999988777777666    3468999999999973

>COG2764 PhnB Uncharacterized protein conserved in bacteria [Function unknown]

Probab=98.06  E-value=5.8e-05  Score=62.41  Aligned_cols=99  Identities=18%  Similarity=0.159  Sum_probs=70.9

Q ss_pred             eeec-CHHHHHHHhhhcceEEeeeccC------C-----------CccEEEEEEeCCc---------ccccCCC-CeeEE
Q 018138          250 LRVG-DLDRAINFYKKYTIAVMGYGPE------D-----------KNAVLELTYNHGV---------TEYDKGN-GYAQI  301 (360)
Q Consensus       250 L~V~-D~e~a~~FY~~~~~~~lG~~~~------~-----------~~~~l~l~~~~~~---------~~~~~g~-g~~hi  301 (360)
                      |.++ |.++|++||++    +||.+..      +           .-...+|......         .....++ .-.-+
T Consensus         6 l~f~gn~~~Al~fY~~----vFgae~~~~~~~~d~~~~~~~~~~~~i~HA~l~i~g~~im~sd~~~~~~~~~~~~~s~~l   81 (136)
T COG2764           6 LFFNGNAREALAFYKE----VFGAEELKRVPFGDMPSSAGEPPGGRIMHAELRIGGSTIMLSDAFPDMGATEGGGTSLSL   81 (136)
T ss_pred             EEECCCHHHHHHHHHH----HhCceEEEEEEcCccCccccccccCceEEEEEEECCEEEEEecCCCccCcccCCCeeEEE
Confidence            5677 99999999999    8887531      1           1112223221110         0111222 23567


Q ss_pred             EEEeCCHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCc
Q 018138          302 AIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  353 (360)
Q Consensus       302 af~V~Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  353 (360)
                      .+.++|+++.++++.+.|+++..++.+..++ .++..++||.|+.|-|....
T Consensus        82 ~~~~~d~da~f~~a~~aGa~v~mpl~~~fwG-~r~G~v~D~fGv~W~l~~~~  132 (136)
T COG2764          82 DLYVEDVDAVFERAAAAGATVVMPLEDTFWG-DRYGQVTDPFGVVWMLNTPV  132 (136)
T ss_pred             EEEehHHHHHHHHHHhcCCeEEecchhcCcc-cceEEEECCCCCEEEEecCc
Confidence            7788899999999999999999999988887 79999999999999997754

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=98.05  E-value=1.1e-05  Score=75.49  Aligned_cols=103  Identities=19%  Similarity=0.243  Sum_probs=72.4

Q ss_pred             ccceeEEEEEEeC--CHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEe-eCCCCceEEEEEEecCCCCC-------CcC
Q 018138          111 DKRRMLHVVYRVG--DLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLG-YGPEDSHFVVELTYNYGVDK-------YDI  180 (360)
Q Consensus       111 ~~~~l~HV~l~V~--Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~-~g~~~~~~~lel~~~~~~~~-------~~~  180 (360)
                      .+..|+|++.+|+  .++.+..||+++|||+.....+.++.. +.++-+ +-.......|.|..+.....       .-.
T Consensus       164 g~~~IDHl~~nv~~~~md~w~~FY~~if~~~~~~~fdi~~p~-tgl~Sram~Sp~G~vrlplN~s~~~~sqi~efl~~y~  242 (363)
T COG3185         164 GLTAIDHLTHNVKAGQMDTWVLFYESLFGFREIQYFDIPGPI-TGLRSRAMVSPCGKVRLPLNESADDKSQIGEFLREYR  242 (363)
T ss_pred             CceeechhhhhcchhhHHHHHHHHHHHhCccceeeEeccCCc-ccEEEeeEecCCCcEEeecccCCCchhHHHHHHHHhC
Confidence            4579999999986  899999999999999998766654432 111111 11111234555544332211       125


Q ss_pred             CCcceEEEEEECCHHHHHHHHHHcCCeEecCCee
Q 018138          181 GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGP  214 (360)
Q Consensus       181 g~g~~hi~f~V~Dld~~~~rL~~~G~~~~~~p~~  214 (360)
                      |.|+.||+|.++|+-+++++|+++|++++..|..
T Consensus       243 G~GIQHIA~~T~dI~~tv~~lr~rG~~fl~ip~t  276 (363)
T COG3185         243 GEGIQHIAFGTDDIYATVAALRERGVKFLPIPET  276 (363)
T ss_pred             CCcceEEEecccHHHHHHHHHHHcCCccCCCchh
Confidence            7899999999999999999999999998877654

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=97.79  E-value=8.3e-05  Score=68.48  Aligned_cols=110  Identities=16%  Similarity=0.263  Sum_probs=79.3

Q ss_pred             CCceeceeeecCHHHHHHHhhhcceEEeeeccCCC-----------------c-cEEEEE--EeCCcc-----cccCCCC
Q 018138          243 EPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK-----------------N-AVLELT--YNHGVT-----EYDKGNG  297 (360)
Q Consensus       243 ~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~-----------------~-~~l~l~--~~~~~~-----~~~~g~g  297 (360)
                      .+++||.++|.|...+..||..    .|||++-..                 + ...-+.  ++.+..     -..+|.+
T Consensus        16 l~f~Hi~F~vgna~q~A~~y~~----~fGfep~A~~~letg~~~~~s~alr~g~~vFv~~s~~~p~~~~~G~~l~~Hgdg   91 (381)
T KOG0638|consen   16 LRFHHIEFWVGNAKQAARWYCS----GFGFEPLAYRGLETGSREWASHALRQGKIVFVFNSAYNPDNSEYGDHLVKHGDG   91 (381)
T ss_pred             eeeeEEEEEecCcHHHHHHHHh----hcCCcchhcccccccchHHHHHHhhcCCEEEEEecCCCCCchhhhhhhhhcccc
Confidence            4799999999999999999998    899875321                 1 111111  122111     1245778


Q ss_pred             eeEEEEEeCCHHHHHHHHHHcCCeEeeCCcccCCCC--cEEEEEECCCCCeEEEEcCcccc
Q 018138          298 YAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGIN--TKITACLDPDGWKSVFVDNLDFL  356 (360)
Q Consensus       298 ~~hiaf~V~Dl~~~~~~l~~~G~~i~~~p~~~~~~~--~~~~~~~DPdG~~iel~~~~~~~  356 (360)
                      .--+||+|+|++++.+.+.++|+++.++|.+.....  -+++.+..+.-....+++..++.
T Consensus        92 vkdvafeVeD~da~~~~~va~Ga~v~~~p~~~~da~G~v~~A~l~tygd~thtlvEr~~y~  152 (381)
T KOG0638|consen   92 VKDVAFEVEDADAIFQEAVANGAKVVRPPWEESDAQGAVTYAVLKTYGDTTHTLVERKGYK  152 (381)
T ss_pred             hhceEEEecchHHHHHHHHHcCCcccCCcceeeccCCcEEEEEEecccchhhhhhhhcccc
Confidence            889999999999999999999999999998766543  36777777776666666655443

>PF14696 Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ; PDB: 1CJX_A 2R5V_A

Probab=97.75  E-value=0.00026  Score=58.87  Aligned_cols=121  Identities=18%  Similarity=0.202  Sum_probs=77.5

Q ss_pred             cccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCC----CcCCCcce
Q 018138          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK----YDIGTGFG  185 (360)
Q Consensus       110 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~----~~~g~g~~  185 (360)
                      ..+.++.||.+.++|.+++..+++ .|||+.+.+-.  ...  ...++-|  .  ..+-+...+....    ..+|+++.
T Consensus         5 ~g~~G~dFvEFa~~~~~~l~~~~~-~lGF~~~a~hr--sk~--v~l~rQG--~--I~~vln~ep~s~a~~~~~~HG~sv~   75 (139)
T PF14696_consen    5 LGLDGFDFVEFAVPDAQALAQLFT-ALGFQPVARHR--SKD--VTLYRQG--D--INFVLNSEPDSFAAEFAAQHGPSVC   75 (139)
T ss_dssp             T-EEEEEEEEEE-SSTTSCHHHHC-CCCEEEECCEC--CCS--EEEEEET--T--EEEEEEEESTSCHHHHHHHHSSEEE
T ss_pred             CCCCCeEEEEEecCCHHHHHHHHH-HhCcceEEecC--Ccc--eEEEEeC--C--EEEEEeCCCcchHHHHHHhcCCEEE
Confidence            356799999999999988888886 59999986532  222  2333333  2  2333333222111    13588999


Q ss_pred             EEEEEECCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCCC
Q 018138          186 HFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  241 (360)
Q Consensus       186 hi~f~V~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~~  241 (360)
                      -++|+|+|.+++++++.+.|.+...+|..  .+...+.-++.+.|.++.|+++...
T Consensus        76 aiafrV~Da~~A~~rA~~~GA~~~~~~~~--~~e~~~paI~g~G~sl~yfVdr~~~  129 (139)
T PF14696_consen   76 AIAFRVDDAAAAYERAVALGAEPVQEPTG--PGELNIPAIRGIGGSLHYFVDRYGD  129 (139)
T ss_dssp             EEEEEES-HHHHHHHHHHTT--EEEEEEE--TT-BEEEEEE-CCC-EEEEEE--SS
T ss_pred             EEEEEeCCHHHHHHHHHHcCCcCcccCCC--CCcEeeeeEEccCCCEEEEEecCCC
Confidence            99999999999999999999998766533  2334467789999999999987653

>PF14696 Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ; PDB: 1CJX_A 2R5V_A

Probab=96.95  E-value=0.0022  Score=53.31  Aligned_cols=104  Identities=21%  Similarity=0.251  Sum_probs=68.2

Q ss_pred             CCceeceeeecCHHHHHHHhhhcceEEeeeccCCC--ccEEEE--------EEeCCccc------ccCCCCeeEEEEEeC
Q 018138          243 EPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK--NAVLEL--------TYNHGVTE------YDKGNGYAQIAIGTD  306 (360)
Q Consensus       243 ~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~--~~~l~l--------~~~~~~~~------~~~g~g~~hiaf~V~  306 (360)
                      .++++|.+.+.|.++...+++     -|||.....  ...+.+        ..|..+..      ..+|++..-++|.|+
T Consensus         8 ~G~dFvEFa~~~~~~l~~~~~-----~lGF~~~a~hrsk~v~l~rQG~I~~vln~ep~s~a~~~~~~HG~sv~aiafrV~   82 (139)
T PF14696_consen    8 DGFDFVEFAVPDAQALAQLFT-----ALGFQPVARHRSKDVTLYRQGDINFVLNSEPDSFAAEFAAQHGPSVCAIAFRVD   82 (139)
T ss_dssp             EEEEEEEEE-SSTTSCHHHHC-----CCCEEEECCECCCSEEEEEETTEEEEEEEESTSCHHHHHHHHSSEEEEEEEEES
T ss_pred             CCeEEEEEecCCHHHHHHHHH-----HhCcceEEecCCcceEEEEeCCEEEEEeCCCcchHHHHHHhcCCEEEEEEEEeC
Confidence            468899999999888888886     688864211  111121        11211111      135889999999999


Q ss_pred             CHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCc
Q 018138          307 DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  353 (360)
Q Consensus       307 Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  353 (360)
                      |..++++++.++|.+...+|.....  -.+..++-+.|.++.|+++.
T Consensus        83 Da~~A~~rA~~~GA~~~~~~~~~~e--~~~paI~g~G~sl~yfVdr~  127 (139)
T PF14696_consen   83 DAAAAYERAVALGAEPVQEPTGPGE--LNIPAIRGIGGSLHYFVDRY  127 (139)
T ss_dssp             -HHHHHHHHHHTT--EEEEEEETT---BEEEEEE-CCC-EEEEEE--
T ss_pred             CHHHHHHHHHHcCCcCcccCCCCCc--EeeeeEEccCCCEEEEEecC
Confidence            9999999999999998887643222  57788999999999999874

>PRK10148 hypothetical protein; Provisional

Probab=96.94  E-value=0.013  Score=49.44  Aligned_cols=53  Identities=15%  Similarity=-0.019  Sum_probs=43.0

Q ss_pred             eeEEEEEeCCHHH---HHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcC
Q 018138          298 YAQIAIGTDDVYK---TAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  352 (360)
Q Consensus       298 ~~hiaf~V~Dl~~---~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  352 (360)
                      -.++++.++|.++   ++++| +.|+++..++.+.+++ .++..++||.|+.|.|...
T Consensus        86 ~~~l~l~~~d~ee~~~~~~aL-a~gg~v~mpl~~~~wg-~~~g~v~D~fGi~W~l~~~  141 (147)
T PRK10148         86 GFTLVLDTQDVEEGKRWFDNL-AANGKIEMAWQETFWA-HGFGKVTDKFGVPWMINVV  141 (147)
T ss_pred             eEEEEEECCCHHHHHHHHHHh-hCCCEEEecchhcchh-hccEEEECCCCCEEEEEec
Confidence            3567777788765   56666 5899999999888875 6889999999999999765

>PF06983 3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltransferase; PDB: 1U7I_A 1TSJ_A 1U69_D 3L20_B 3OMS_A

Probab=96.08  E-value=0.27  Score=39.57  Aligned_cols=96  Identities=19%  Similarity=0.373  Sum_probs=54.0

Q ss_pred             CCHHHHHHHHHHhcCC-EEEEEeeCCC------CCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEECC--
Q 018138          123 GDLDKTIKFYTECLGM-KLLRKRDIPE------DRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVED--  193 (360)
Q Consensus       123 ~Dle~a~~FY~~vLG~-~~~~~~~~~~------~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~D--  193 (360)
                      .+.++|.+||+++||- ++......++      +....+.+..+..    .+-.....  +....+++ ..+++.++|  
T Consensus        11 g~a~eA~~fY~~vf~~~~i~~~~~~~~~~~~~~~~v~ha~l~i~g~----~lm~~D~~--~~~~~~~~-~sl~i~~~~~e   83 (116)
T PF06983_consen   11 GNAEEALEFYKEVFGGSEIMTFGDYPDDEPEWKDKVMHAELTIGGQ----KLMASDGG--PDFPFGNN-ISLCIECDDEE   83 (116)
T ss_dssp             S-HHHHHHHHHHHSTTEEEEEEEE-TTTCTTHTTSEEEEEEEETTE----EEEEEEES--TS----TT-EEEEEEESSHH
T ss_pred             CCHHHHHHHHHHHcCCCEEEEEeECCCCCCCCCCcEEEEEEEECCe----EEEEECCC--CCCCCCCc-EEEEEEcCCHH
Confidence            6899999999999994 3333333322      2344455555421    22222222  22233333 578888887  


Q ss_pred             -HHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEe
Q 018138          194 -VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  236 (360)
Q Consensus       194 -ld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~  236 (360)
                       +++++++|.+-|-          +.. .+..++|.-|..|.|+
T Consensus        84 e~~~~f~~Ls~gG~----------~~~-~~G~v~DkFGv~Wqiv  116 (116)
T PF06983_consen   84 EIDRIFDKLSEGGQ----------WFS-RYGWVTDKFGVSWQIV  116 (116)
T ss_dssp             HHHHHHHHHHTTTE----------TCC-EEEEEE-TTS-EEEEE
T ss_pred             HHHHHHHHHHcCCC----------ccc-eeEEEEeCCCCEEEeC
Confidence             5666788766664          222 3688999999999875

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=96.06  E-value=0.0088  Score=51.74  Aligned_cols=73  Identities=25%  Similarity=0.366  Sum_probs=42.3

Q ss_pred             ceeceeeecCHHHHHHHhhhcceEEeeeccCCC----------------ccEEEEEEeCCccc------------ccCCC
Q 018138          245 LCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK----------------NAVLELTYNHGVTE------------YDKGN  296 (360)
Q Consensus       245 i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~----------------~~~l~l~~~~~~~~------------~~~g~  296 (360)
                      |+|+.+.|+|++++.++|++    .+|+.....                +..+|+........            ...+.
T Consensus         1 lDH~v~~v~dl~~a~~~~~~----~lGf~~~~gg~h~~~GT~N~li~f~~~YlEli~i~~~~~~~~~~~~~~~~~~~~~~   76 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFEQ----RLGFTVTPGGEHPGWGTANALIPFGDGYLELIAIDPEAPAPDRGRWFGLDRLAGGE   76 (175)
T ss_dssp             EEEEEEE-TTGGG----GGG----S--S--EEEEE-TTT-EEEEEEE-SSSEEEEEEES-HHHSTGGGT-TTTHHHHT--
T ss_pred             CCEEEEEcCCHHHHHHhhhh----cceEeecCCCcCCCCccEEEEEeeCCceEEEEEeCCcccccccccceechhhcCCC
Confidence            68999999999999999965    777764211                23566644211110            12467


Q ss_pred             CeeEEEEEeCCHHHHHHHHHHcCCe
Q 018138          297 GYAQIAIGTDDVYKTAEAIKLSGGK  321 (360)
Q Consensus       297 g~~hiaf~V~Dl~~~~~~l~~~G~~  321 (360)
                      |+..+++.++|+++..+++++.|++
T Consensus        77 g~~~~~l~t~d~~~~~~~l~~~G~~  101 (175)
T PF13468_consen   77 GLYGWALRTDDIEAVAARLRAAGLD  101 (175)
T ss_dssp             EEEEEEEE-S-HHHHHHHHHTTT-E
T ss_pred             CeEEEEEecCCHHHHHHHHHhcCCC
Confidence            8999999999999999999999986

>PF14507 CppA_C: CppA C-terminal; PDB: 3E0R_D

Probab=95.70  E-value=0.031  Score=43.53  Aligned_cols=89  Identities=15%  Similarity=0.193  Sum_probs=45.8

Q ss_pred             ceeceeeecCHHHHHHHhhhcceEEeeeccCCCccEEEEEEeCCccc-cc--CCCCeeEEEEEeC---CHHHHHHHHHHc
Q 018138          245 LCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDKNAVLELTYNHGVTE-YD--KGNGYAQIAIGTD---DVYKTAEAIKLS  318 (360)
Q Consensus       245 i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~~~~l~l~~~~~~~~-~~--~g~g~~hiaf~V~---Dl~~~~~~l~~~  318 (360)
                      +..+.|+|.| +++..||++    +|+-+..   ..+.+....|+.= .+  ..-++-.+-|.|+   |+.+..+++.+ 
T Consensus         6 ~e~i~LNV~d-~~~~~fy~~----~f~~~~~---~~l~f~ea~G~DL~~~~~~twDLe~Lkf~V~~~~Dl~~L~~~le~-   76 (101)
T PF14507_consen    6 FESIELNVPD-AKSQSFYQS----IFGGQLP---FFLTFQEAQGPDLTIENNETWDLEMLKFQVPKDFDLAALKSHLEE-   76 (101)
T ss_dssp             E-EEEEEE-T--T---S--H-------HHHT---TTEEEEE---CCGSS-TTSBSSEEEEEEEES-S--HHHHHHHTTT-
T ss_pred             EEEEEEeCCC-hhHHHHHHh----ccccCCC---ceEEEeeccCCccccCCCcEEeeEEEEEEecCcccHHHHHHHhcc-
Confidence            4568899999 889999999    8873322   3455555444321 11  1236778888997   56678888876 


Q ss_pred             CCeEeeCCcccCCCCcEEEEEECCCCCeEEE
Q 018138          319 GGKITREPGPLPGINTKITACLDPDGWKSVF  349 (360)
Q Consensus       319 G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel  349 (360)
                       ..+..+..      .+++.+.||+|..+.+
T Consensus        77 -~~~fidKk------~k~l~~~Dps~IElWF  100 (101)
T PF14507_consen   77 -QEFFIDKK------EKFLVTSDPSQIELWF  100 (101)
T ss_dssp             -S-EE--TT-------SEEEEE-TTS-EEEE
T ss_pred             -cceEecCC------ceEEEEECCcceEEEe
Confidence             34444332      6889999999999886

>PF15067 FAM124: FAM124 family

Probab=95.37  E-value=0.13  Score=46.01  Aligned_cols=103  Identities=19%  Similarity=0.287  Sum_probs=61.0

Q ss_pred             eeEEEEEEeC--CHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEec---CCCCCCcCCCcceEEE
Q 018138          114 RMLHVVYRVG--DLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN---YGVDKYDIGTGFGHFG  188 (360)
Q Consensus       114 ~l~HV~l~V~--Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~---~~~~~~~~g~g~~hi~  188 (360)
                      -+--+.|.|+  |.+.+++||+-+|+-+...+..    ++ -+|.-+...  .+.|.+.-+   .+..+.  ...-.-+.
T Consensus       128 EilRftly~~~~N~~d~vr~Yelil~~~~~~~k~----~F-C~F~lys~~--~~~iQlsLK~lp~~~~p~--p~esavLq  198 (236)
T PF15067_consen  128 EILRFTLYCSFDNYEDMVRFYELILQREPTQQKE----DF-CFFTLYSQP--GLDIQLSLKQLPPGMSPE--PTESAVLQ  198 (236)
T ss_pred             cEEEEEEEecCCCHHHHHHHHHHHhccCcceeeC----Cc-EEEEEecCC--CeEEEEEeccCCCCCCcc--cccceEEE
Confidence            4667889998  9999999999999998865533    12 123333332  344444332   121111  11224589


Q ss_pred             EEECCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEE
Q 018138          189 IAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL  235 (360)
Q Consensus       189 f~V~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl  235 (360)
                      |.|.|+.+++-.|=.--..       ...+.   ...+|||||.|=|
T Consensus       199 F~V~~igqLvpLLPnpc~P-------IS~~r---WqT~D~DGNkILL  235 (236)
T PF15067_consen  199 FRVEDIGQLVPLLPNPCSP-------ISETR---WQTEDYDGNKILL  235 (236)
T ss_pred             EEecchhhhcccCCCCccc-------ccCCc---ceeeCCCCCEecc
Confidence            9999998876654221111       11222   4689999998843

>PF14506 CppA_N: CppA N-terminal; PDB: 3E0R_D

Probab=95.02  E-value=0.37  Score=38.67  Aligned_cols=100  Identities=22%  Similarity=0.300  Sum_probs=51.9

Q ss_pred             eceeeecCHHHHHHHhhhcceEEeeeccCC------------CccEEEEEEeCCcc--cccCCCCeeEEEEEeCCHHHHH
Q 018138          247 QVMLRVGDLDRAINFYKKYTIAVMGYGPED------------KNAVLELTYNHGVT--EYDKGNGYAQIAIGTDDVYKTA  312 (360)
Q Consensus       247 hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~------------~~~~l~l~~~~~~~--~~~~g~g~~hiaf~V~Dl~~~~  312 (360)
                      +-+|+|+|-+..++||++    .|||+.-.            ....+.+..+++..  ......-+.++.+.|.+..++-
T Consensus         3 ~PvlRVnnR~~ni~FY~~----~LGfkll~EEna~a~lg~~~~~erlvlEESP~~rtr~V~G~KKl~~ivIkv~~~~EIe   78 (125)
T PF14506_consen    3 IPVLRVNNRDLNIDFYQK----TLGFKLLSEENALAILGDQQKEERLVLEESPSMRTRAVEGPKKLNRIVIKVPNPKEIE   78 (125)
T ss_dssp             EEEEEESSHHHHHHHHTT----TT--EEEEEETTEEEEE-TT--EEEEEEE--TTT-B--SSS-SEEEEEEEESSHHHHH
T ss_pred             CceEEEcCHHHhHHHHHh----ccCcEEeeccccEEEecCCCCceEEEEecCCccccccccCcceeeEEEEEcCCHHHHH
Confidence            346899999999999999    88887311            11222233333222  1222246889999998865543


Q ss_pred             HHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCcc
Q 018138          313 EAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  354 (360)
Q Consensus       313 ~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  354 (360)
                       .|.++|.++..-   .-+-+++-+-..+|.|..|.+....|
T Consensus        79 -~LLar~~~~~~l---~kg~~gyAfe~vSPEgd~~llhaEdd  116 (125)
T PF14506_consen   79 -ALLARGAQYDRL---YKGKNGYAFEAVSPEGDRFLLHAEDD  116 (125)
T ss_dssp             -HHHHC-S--SEE---EE-SSSEEEEEE-TT--EEEEE--S-
T ss_pred             -HHHhccccccee---EEcCCceEEEEECCCCCEEEEEEcCC
Confidence             344455553221   12233666778899999999977654

>PF14507 CppA_C: CppA C-terminal; PDB: 3E0R_D

Probab=91.21  E-value=0.43  Score=37.26  Aligned_cols=88  Identities=16%  Similarity=0.218  Sum_probs=39.5

Q ss_pred             eeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCC---CCcCCCcceEEEEE
Q 018138          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD---KYDIGTGFGHFGIA  190 (360)
Q Consensus       114 ~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~---~~~~g~g~~hi~f~  190 (360)
                      .+..|.|+|+| +++++||+++||-.+.         .              .+.+.+..++.   .....-++..+-|.
T Consensus         5 ~~e~i~LNV~d-~~~~~fy~~~f~~~~~---------~--------------~l~f~ea~G~DL~~~~~~twDLe~Lkf~   60 (101)
T PF14507_consen    5 EFESIELNVPD-AKSQSFYQSIFGGQLP---------F--------------FLTFQEAQGPDLTIENNETWDLEMLKFQ   60 (101)
T ss_dssp             EE-EEEEEE-T--T---S--H---HHHT---------T--------------TEEEEE---CCGSS-TTSBSSEEEEEEE
T ss_pred             EEEEEEEeCCC-hhHHHHHHhccccCCC---------c--------------eEEEeeccCCccccCCCcEEeeEEEEEE
Confidence            35678899999 8899999998862221         0              12222211110   00112256778889


Q ss_pred             EC---CHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEE
Q 018138          191 VE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF  233 (360)
Q Consensus       191 V~---Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~i  233 (360)
                      |+   |+.++.+++.+.+.        +-+....++.+.||.+..+
T Consensus        61 V~~~~Dl~~L~~~le~~~~--------fidKk~k~l~~~Dps~IEl   98 (101)
T PF14507_consen   61 VPKDFDLAALKSHLEEQEF--------FIDKKEKFLVTSDPSQIEL   98 (101)
T ss_dssp             ES-S--HHHHHHHTTTS-E--------E--TT-SEEEEE-TTS-EE
T ss_pred             ecCcccHHHHHHHhcccce--------EecCCceEEEEECCcceEE
Confidence            98   68888888877332        2223334688899998544

>PF15067 FAM124: FAM124 family

Probab=85.93  E-value=4.3  Score=36.53  Aligned_cols=93  Identities=13%  Similarity=0.182  Sum_probs=55.8

Q ss_pred             CCceeceeeec--CHHHHHHHhhhcceEEeeeccCCC-------------ccEEEEEEeCCcccc-cCCCCeeEEEEEeC
Q 018138          243 EPLCQVMLRVG--DLDRAINFYKKYTIAVMGYGPEDK-------------NAVLELTYNHGVTEY-DKGNGYAQIAIGTD  306 (360)
Q Consensus       243 ~~i~hv~L~V~--D~e~a~~FY~~~~~~~lG~~~~~~-------------~~~l~l~~~~~~~~~-~~g~g~~hiaf~V~  306 (360)
                      ..+..++|.|+  |.+.+++||+-    +++-+....             +..+.+....-+... +....-..+.|.|+
T Consensus       127 ~EilRftly~~~~N~~d~vr~Yel----il~~~~~~~k~~FC~F~lys~~~~~iQlsLK~lp~~~~p~p~esavLqF~V~  202 (236)
T PF15067_consen  127 KEILRFTLYCSFDNYEDMVRFYEL----ILQREPTQQKEDFCFFTLYSQPGLDIQLSLKQLPPGMSPEPTESAVLQFRVE  202 (236)
T ss_pred             ccEEEEEEEecCCCHHHHHHHHHH----HhccCcceeeCCcEEEEEecCCCeEEEEEeccCCCCCCcccccceEEEEEec
Confidence            46778889998  99999999996    666543221             122222221100011 11123467999999


Q ss_pred             CHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEE
Q 018138          307 DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVF  349 (360)
Q Consensus       307 Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel  349 (360)
                      |+-+++-.|-.--.+         ...++ ..-.|||||.|-|
T Consensus       203 ~igqLvpLLPnpc~P---------IS~~r-WqT~D~DGNkILL  235 (236)
T PF15067_consen  203 DIGQLVPLLPNPCSP---------ISETR-WQTEDYDGNKILL  235 (236)
T ss_pred             chhhhcccCCCCccc---------ccCCc-ceeeCCCCCEecc
Confidence            999887766433222         22122 5679999999854

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	360
1f9z_A	135	Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I		8e-41
1f9z_A	135	Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I		3e-22
2c21_A	144	Specificity Of The Trypanothione-Dependednt Leishma		4e-30
2c21_A	144	Specificity Of The Trypanothione-Dependednt Leishma		2e-13
3zi1_A	330	Crystal Structure Of Human Glyoxalase Domain-contai		1e-21
2za0_A	184	Crystal Structure Of Mouse Glyoxalase I Complexed W		2e-13
2za0_A	184	Crystal Structure Of Mouse Glyoxalase I Complexed W		1e-04
1fro_A	183	Human Glyoxalase I With Benzyl-Glutathione Inhibito		6e-13
3vw9_A	187	Human Glyoxalase I With An N-Hydroxypyridone Inhibi		7e-13
3vw9_A	187	Human Glyoxalase I With An N-Hydroxypyridone Inhibi		7e-04
1bh5_A	183	Human Glyoxalase I Q33e, E172q Double Mutant Length		2e-12

>pdb|1F9Z|A Chain A, Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I From Escherichia Coli Length = 135

Iteration: 1
 Score =  164 bits (414), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 73/124 (58%), Positives = 97/124 (78%)
Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           R+LH + RVGDL ++I FYT+ LGMKLLR  + PE +Y+ AF+GYGPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61
Query: 174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
           GVDKY++GT +GH  ++V++ A+  + ++  GG VTRE GPVKGG TVIAF+EDPDGYK 
Sbjct: 62  GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121
Query: 234 ELLE 237
           EL+E
Sbjct: 122 ELIE 125

>pdb|1F9Z|A Chain A, Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I From Escherichia Coli Length = 135

Iteration: 1
 Score =  102 bits (254), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 53/126 (42%), Positives = 72/126 (57%), Gaps = 16/126 (12%)
Query: 245 LCQVMLRVGDLDRAINFYKK----------------YTIAVMGYGPEDKNAVLELTYNHG 288
           L   MLRVGDL R+I+FY K                Y++A +GYGPE + AV+ELTYN G
Sbjct: 3   LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWG 62
Query: 289 VTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSV 348
           V +Y+ G  Y  IA+  D+  +  E I+ +GG +TRE GP+ G  T I    DPDG+K  
Sbjct: 63  VDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIE 122
Query: 349 FVDNLD 354
            ++  D
Sbjct: 123 LIEEKD 128

>pdb|2C21|A Chain A, Specificity Of The Trypanothione-Dependednt Leishmania Major Glyoxalase I: Structure And Biochemical Comparison With The Human Enzyme Length = 144

Iteration: 1
 Score =  128 bits (322), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 67/124 (54%), Positives = 82/124 (66%), Gaps = 5/124 (4%)
Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
           RRMLH + RVGDLD++IKFYTE LGMK+LRK D+PED+YT  FLGYGPE S  V+ELTYN
Sbjct: 7   RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYN 66
Query: 173 YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 232
           YGV  Y     +GH  I VEDV + V  ++     +  E       +  +AF+ DPDGY 
Sbjct: 67  YGVTSYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYE-----DESGFMAFVVDPDGYY 121
Query: 233 FELL 236
            ELL
Sbjct: 122 IELL 125

>pdb|2C21|A Chain A, Specificity Of The Trypanothione-Dependednt Leishmania Major Glyoxalase I: Structure And Biochemical Comparison With The Human Enzyme Length = 144

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/117 (36%), Positives = 58/117 (49%), Gaps = 21/117 (17%)
Query: 245 LCQVMLRVGDLDRAINFY----------------KKYTIAVMGYGPEDKNAVLELTYNHG 288
           +   M+RVGDLDR+I FY                 KYT+  +GYGPE  + VLELTYN+G
Sbjct: 9   MLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYG 68
Query: 289 VTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGW 345
           VT Y     Y  IAIG +DV +    ++     I  E       +  +   +DPDG+
Sbjct: 69  VTSYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDE-----SGFMAFVVDPDGY 120

>pdb|3ZI1|A Chain A, Crystal Structure Of Human Glyoxalase Domain-containing Protein 4 (glod4) Length = 330

Iteration: 1
 Score =  100 bits (249), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 122/273 (44%), Gaps = 45/273 (16%)
Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPED-----------RYTNAFLGYGPE 161
           RR LH V++VG+  +T +FY + LGMK+LR  +  E            +++   +G+GPE
Sbjct: 26  RRALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPE 85
Query: 162 DSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTV 221
           D HFV ELTYNYGV  Y +G  F   GI +       +  K +         P+      
Sbjct: 86  DDHFVAELTYNYGVGDYKLGNDF--MGITLASSQAVSNARKLE--------WPLTEVAEG 135
Query: 222 IAFIEDPDGYKFELLERG-PTPEPLCQVMLRVGDLDRAINFY------------KKYTIA 268
           +   E P GYKF L  R  P  +P+ +V L V DL +++N++            ++   A
Sbjct: 136 VFETEAPGGYKFYLQNRSLPQSDPVLKVTLAVSDLQKSLNYWCNLLGMKIYENDEEKQRA 195
Query: 269 VMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGP 328
           ++GY   D    LEL    G  ++    G    +    ++    + +K    KI     P
Sbjct: 196 LLGYA--DNQCKLELQGVKGGVDHAAAFGRIAFSCPQKELPDLEDLMKRENQKILT---P 250
Query: 329 LPGINT------KITACLDPDGWKSVFVDNLDF 355
           L  ++T      ++    DPDG +  FV +  F
Sbjct: 251 LVSLDTPGKATVQVVILADPDGHEICFVGDEAF 283

>pdb|2ZA0|A Chain A, Crystal Structure Of Mouse Glyoxalase I Complexed With Methyl-Gerfelin Length = 184

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 73/148 (49%), Gaps = 30/148 (20%)
Query: 115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYG-----PEDS------ 163
           +   + R+ D  K++ FYT  LG+ LL+K D P  +++  FL Y      P+D       
Sbjct: 32  LQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAW 91
Query: 164 ----HFVVELTYNYGVDKYDIGT---------GFGHFGIAVEDVAKTVDLVKAKGGKVTR 210
                  +ELT+N+G +  +  +         GFGH GIAV DV       +  G K  +
Sbjct: 92  TFSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVK 151
Query: 211 EP--GPVKGGNTVIAFIEDPDGYKFELL 236
           +P  G +KG    +AFI+DPDGY  E+L
Sbjct: 152 KPDDGKMKG----LAFIQDPDGYWIEIL 175

>pdb|2ZA0|A Chain A, Crystal Structure Of Mouse Glyoxalase I Complexed With Methyl-Gerfelin Length = 184

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 69/182 (37%), Gaps = 61/182 (33%)
Query: 211 EPGPVKGG---NTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYK---- 263
           EP P   G    T  +   DPD    + L        L Q MLR+ D  ++++FY     
Sbjct: 3   EPQPASSGLTDETAFSCCSDPDPSTKDFL--------LQQTMLRIKDPKKSLDFYTRVLG 54
Query: 264 ------------KYTIAVMGYGPEDKN-----------------AVLELTYNHGVTE--- 291
                       K+++  + Y  EDKN                 A LELT+N G  +   
Sbjct: 55  LTLLQKLDFPAMKFSLYFLAY--EDKNDIPKDKSEKTAWTFSRKATLELTHNWGTEDDET 112
Query: 292 --YDKGN----GYAQIAIGTDDVYKTAEAIKLSGGKITREP--GPLPGINTKITACLDPD 343
             Y  GN    G+  I I   DVY   +  +  G K  ++P  G + G    +    DPD
Sbjct: 113 QSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKG----LAFIQDPD 168
Query: 344 GW 345
           G+
Sbjct: 169 GY 170

>pdb|1FRO|A Chain A, Human Glyoxalase I With Benzyl-Glutathione Inhibitor Length = 183

Iteration: 1
 Score = 71.6 bits (174), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 74/150 (49%), Gaps = 34/150 (22%)
Query: 115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFV-------- 166
           +   + RV D  K++ FYT  LGM L++K D P  +++  FL Y  ED + +        
Sbjct: 31  LQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAY--EDKNDIPKEKDEKI 88
Query: 167 ---------VELTYNYGVDKYDIGT---------GFGHFGIAVEDVAKTVDLVKAKGGKV 208
                    +ELT+N+G +  +  +         GFGH GIAV DV       +  G K 
Sbjct: 89  AWALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKF 148
Query: 209 TREP--GPVKGGNTVIAFIEDPDGYKFELL 236
            ++P  G +KG    +AFI+DPDGY  E+L
Sbjct: 149 VKKPDDGKMKG----LAFIQDPDGYWIEIL 174

>pdb|3VW9|A Chain A, Human Glyoxalase I With An N-Hydroxypyridone Inhibitor Length = 187

Iteration: 1
 Score = 71.6 bits (174), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 74/150 (49%), Gaps = 34/150 (22%)
Query: 115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFV-------- 166
           +   + RV D  K++ FYT  LGM L++K D P  +++  FL Y  ED + +        
Sbjct: 35  LQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAY--EDKNDIPKEKDEKI 92
Query: 167 ---------VELTYNYGVDKYDIGT---------GFGHFGIAVEDVAKTVDLVKAKGGKV 208
                    +ELT+N+G +  +  +         GFGH GIAV DV       +  G K 
Sbjct: 93  AWALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKF 152
Query: 209 TREP--GPVKGGNTVIAFIEDPDGYKFELL 236
            ++P  G +KG    +AFI+DPDGY  E+L
Sbjct: 153 VKKPDDGKMKG----LAFIQDPDGYWIEIL 178

>pdb|3VW9|A Chain A, Human Glyoxalase I With An N-Hydroxypyridone Inhibitor Length = 187

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 73/195 (37%), Gaps = 62/195 (31%)
Query: 206 GKVTREPGPVKGGNT---VIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFY 262
           G    EP P  GG T    ++   D D    + L        L Q MLRV D  ++++FY
Sbjct: 1   GSHMAEPQPPSGGLTDEAALSCCSDADPSTKDFL--------LQQTMLRVKDPKKSLDFY 52
Query: 263 K----------------KYTIAVMGYGPEDKN-----------------AVLELTYNHGV 289
                            K+++  + Y  EDKN                 A LELT+N G 
Sbjct: 53  TRVLGMTLIQKCDFPIMKFSLYFLAY--EDKNDIPKEKDEKIAWALSRKATLELTHNWGT 110
Query: 290 TE-----YDKGN----GYAQIAIGTDDVYKTAEAIKLSGGKITREP--GPLPGINTKITA 338
            +     Y  GN    G+  I I   DVY   +  +  G K  ++P  G + G    +  
Sbjct: 111 EDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKG----LAF 166
Query: 339 CLDPDG-WKSVFVDN 352
             DPDG W  +   N
Sbjct: 167 IQDPDGYWIEILNPN 181

>pdb|1BH5|A Chain A, Human Glyoxalase I Q33e, E172q Double Mutant Length = 183

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 74/150 (49%), Gaps = 34/150 (22%)
Query: 115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFV-------- 166
           +   + RV D  K++ FYT  LGM L++K D P  +++  FL Y  ED + +        
Sbjct: 31  LQETMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAY--EDKNDIPKEKDEKI 88
Query: 167 ---------VELTYNYGVDKYDIGT---------GFGHFGIAVEDVAKTVDLVKAKGGKV 208
                    +ELT+N+G +  +  +         GFGH GIAV DV       +  G K 
Sbjct: 89  AWALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKF 148
Query: 209 TREP--GPVKGGNTVIAFIEDPDGYKFELL 236
            ++P  G +KG    +AFI+DPDGY  ++L
Sbjct: 149 VKKPDDGKMKG----LAFIQDPDGYWIQIL 174

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	360
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	5e-64
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	3e-26
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	1e-63
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	1e-28
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	9e-46
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	1e-20
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	8e-40
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	7e-13
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	7e-04
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	2e-36
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	2e-12
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	9e-34
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	7e-10
2p25_A	126	Glyoxalase family protein; structural genomics, MC	5e-33
2p25_A	126	Glyoxalase family protein; structural genomics, MC	1e-09
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	2e-32
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	1e-12
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	3e-06
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	3e-32
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	5e-11
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	6e-30
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	3e-12
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	2e-27
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	1e-06
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	5e-27
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	1e-11
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	3e-25
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	6e-09
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	6e-25
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	1e-10
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	8e-23
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	2e-10
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	3e-21
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	3e-04
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	2e-20
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	5e-14
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	3e-20
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	4e-09
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	5e-19
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	4e-04
3ghj_A	141	Putative integron gene cassette protein; integron	1e-18
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	8e-18
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	8e-18
3huh_A	152	Virulence protein STM3117; structural genomics, ny	1e-17
3huh_A	152	Virulence protein STM3117; structural genomics, ny	2e-05
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	2e-17
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	3e-04
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	2e-17
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	1e-16
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	4e-16
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	8e-16
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	4e-15
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	6e-05
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	4e-15
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	1e-08
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	7e-15
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	7e-15
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	7e-05
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	7e-15
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	8e-09
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	8e-15
1nki_A	135	Probable fosfomycin resistance protein; potassium	1e-14
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	9e-14
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	5e-06
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	1e-13
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	1e-08
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	3e-13
3eck_A	365	Protein (homoprotocatechuate 2,3-dioxygenase); oxi	4e-13
3eck_A	365	Protein (homoprotocatechuate 2,3-dioxygenase); oxi	1e-04
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	1e-12
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	1e-12
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	1e-07
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	1e-12
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	2e-12
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	2e-12
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	2e-12
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	5e-12
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	6e-08
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	6e-12
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	4e-05
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	8e-12
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	2e-04
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	1e-11
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	4e-04
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	2e-11
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	4e-05
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	9e-11
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	1e-05
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	1e-10
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	2e-05
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	1e-10
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	2e-07
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	2e-10
2i7r_A	118	Conserved domain protein; structural genomics cons	6e-10
2i7r_A	118	Conserved domain protein; structural genomics cons	3e-06
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	9e-10
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	3e-07
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	2e-09
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	4e-09
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	2e-07
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	4e-09
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	6e-09
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	3e-08
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	2e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	3e-07
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	5e-07
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	7e-07
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	1e-06
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	1e-06
1xy7_A	166	Unknown protein; structural genomics, protein stru	6e-06
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	1e-05
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	1e-04
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	4e-04
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	6e-04

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1 Length = 144

 Score =  199 bits (507), Expect = 5e-64
 Identities = 70/143 (48%), Positives = 84/143 (58%), Gaps = 5/143 (3%)

Query: 112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTY 171
            RRMLH + RVGDLD++IKFYTE LGMK+LRK D+PED+YT  FLGYGPE S  V+ELTY
Sbjct: 6   SRRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTY 65

Query: 172 NYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGY 231
           NYGV  Y     +GH  I VEDV + V  ++     +  E          +AF+ DPDGY
Sbjct: 66  NYGVTSYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDES-----GFMAFVVDPDGY 120

Query: 232 KFELLERGPTPEPLCQVMLRVGD 254
             ELL      E     M   G 
Sbjct: 121 YIELLNEKTMMEKAEADMKEQGT 143

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1 Length = 144

 Score =  101 bits (253), Expect = 3e-26
 Identities = 44/130 (33%), Positives = 62/130 (47%), Gaps = 21/130 (16%)

Query: 247 QVMLRVGDLDRAINFYK----------------KYTIAVMGYGPEDKNAVLELTYNHGVT 290
             M+RVGDLDR+I FY                 KYT+  +GYGPE  + VLELTYN+GVT
Sbjct: 11  HTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVT 70

Query: 291 EYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFV 350
            Y     Y  IAIG +DV +    ++     I  E          +   +DPDG+    +
Sbjct: 71  SYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDES-----GFMAFVVDPDGYYIELL 125

Query: 351 DNLDFLKELE 360
           +    +++ E
Sbjct: 126 NEKTMMEKAE 135

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A Length = 135

 Score =  197 bits (504), Expect = 1e-63
 Identities = 74/132 (56%), Positives = 98/132 (74%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           R+LH + RVGDL ++I FYT+ LGMKLLR  + PE +Y+ AF+GYGPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
           GVDKY++GT +GH  ++V++ A+  + ++  GG VTRE GPVKGG TVIAF+EDPDGYK 
Sbjct: 62  GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query: 234 ELLERGPTPEPL 245
           EL+E       L
Sbjct: 122 ELIEEKDAGRGL 133

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A Length = 135

 Score =  107 bits (268), Expect = 1e-28
 Identities = 53/129 (41%), Positives = 73/129 (56%), Gaps = 16/129 (12%)

Query: 247 QVMLRVGDLDRAINFYK----------------KYTIAVMGYGPEDKNAVLELTYNHGVT 290
             MLRVGDL R+I+FY                 KY++A +GYGPE + AV+ELTYN GV 
Sbjct: 5   HTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVD 64

Query: 291 EYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFV 350
           +Y+ G  Y  IA+  D+  +  E I+ +GG +TRE GP+ G  T I    DPDG+K   +
Sbjct: 65  KYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELI 124

Query: 351 DNLDFLKEL 359
           +  D  + L
Sbjct: 125 EEKDAGRGL 133

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* Length = 184

 Score =  154 bits (389), Expect = 9e-46
 Identities = 50/181 (27%), Positives = 77/181 (42%), Gaps = 31/181 (17%)

Query: 94  PTSNTVTEQNVLDWVKS-----DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE 148
           P S+ +T++                 +   + R+ D  K++ FYT  LG+ LL+K D P 
Sbjct: 6   PASSGLTDETAFSCCSDPDPSTKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPA 65

Query: 149 DRYTNAFLGYGPED---------------SHFVVELTYNYGVD-----KYDIG----TGF 184
            +++  FL Y  ++                   +ELT+N+G +      Y  G     GF
Sbjct: 66  MKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGTEDDETQSYHNGNSDPRGF 125

Query: 185 GHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEP 244
           GH GIAV DV       +  G K  ++P    G    +AFI+DPDGY  E+L        
Sbjct: 126 GHIGIAVPDVYSACKRFEELGVKFVKKPDD--GKMKGLAFIQDPDGYWIEILNPNKIATI 183

Query: 245 L 245
           +
Sbjct: 184 I 184

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* Length = 184

 Score = 87.4 bits (216), Expect = 1e-20
 Identities = 43/179 (24%), Positives = 66/179 (36%), Gaps = 53/179 (29%)

Query: 211 EPGPVKGG---NTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYK---- 263
           EP P   G    T  +   DPD    + L        L Q MLR+ D  ++++FY     
Sbjct: 3   EPQPASSGLTDETAFSCCSDPDPSTKDFL--------LQQTMLRIKDPKKSLDFYTRVLG 54

Query: 264 ------------KYTIAVMGYGPED---------------KNAVLELTYNHGVTE----- 291
                       K+++  + Y  ++               + A LELT+N G  +     
Sbjct: 55  LTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGTEDDETQS 114

Query: 292 YDKGN----GYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWK 346
           Y  GN    G+  I I   DVY   +  +  G K  ++P    G    +    DPDG+ 
Sbjct: 115 YHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPD--DGKMKGLAFIQDPDGYW 171

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans} Length = 161

 Score =  137 bits (347), Expect = 8e-40
 Identities = 35/137 (25%), Positives = 56/137 (40%), Gaps = 6/137 (4%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           ++ H+   V  +   + FY   L +KLL   D+P      AFL  G      +  L+   
Sbjct: 8   KLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGESKIELLEPLSEES 67

Query: 174 GVDKY--DIGTGFGHFGIAVEDVAKTVDLVKAKGGKV-TREPGPVKGGNTVIAFI--EDP 228
            + K+    G G  H  I V+ + + +  VK  G ++   EP P   G   +AF+     
Sbjct: 68  PIAKFIQKRGEGIHHIAIGVKSIEERIQEVKENGVQMINDEPVPGARGAQ-VAFLHPRSA 126

Query: 229 DGYKFELLERGPTPEPL 245
            G  +E  E+    E L
Sbjct: 127 RGVLYEFCEKKEQAENL 143

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans} Length = 161

 Score = 64.8 bits (158), Expect = 7e-13
 Identities = 21/132 (15%), Positives = 40/132 (30%), Gaps = 31/132 (23%)

Query: 247 QVMLRVGDLDRAINFYK----------------KYTIAVMGYGPEDKNAVLELTYNHGVT 290
            + + V  +   + FY                    IA +  G      +  L+    + 
Sbjct: 11  HIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGESKIELLEPLSEESPIA 70

Query: 291 EYDKGNGYA--QIAIGTDDVYKTAEAIKLSGGK-ITREPGPLPGINTKITACLDPDGWKS 347
           ++ +  G     IAIG   + +  + +K +G + I  EP P               G + 
Sbjct: 71  KFIQKRGEGIHHIAIGVKSIEERIQEVKENGVQMINDEPVP------------GARGAQV 118

Query: 348 VFVDNLDFLKEL 359
            F+        L
Sbjct: 119 AFLHPRSARGVL 130

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans} Length = 161

 Score = 38.7 bits (90), Expect = 7e-04
 Identities = 19/100 (19%), Positives = 33/100 (33%), Gaps = 12/100 (12%)

Query: 186 HFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE-------- 237
           H GIAV  +   +                +      IAF+E  +  K ELLE        
Sbjct: 11  HIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGES-KIELLEPLSEESPI 69

Query: 238 ---RGPTPEPLCQVMLRVGDLDRAINFYKKYTIAVMGYGP 274
                   E +  + + V  ++  I   K+  + ++   P
Sbjct: 70  AKFIQKRGEGIHHIAIGVKSIEERIQEVKENGVQMINDEP 109

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} Length = 134

 Score =  127 bits (321), Expect = 2e-36
 Identities = 29/130 (22%), Positives = 51/130 (39%), Gaps = 5/130 (3%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
            R+ HV   V DL+K   FY   LG ++     +PE   +  F+  G      +  L  +
Sbjct: 4   GRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNTKMELLHPLGLD 63

Query: 173 YGVDKY---DIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFI--ED 227
             +  +   +   G  H  I V+++   V  +K K  +   E   +      + F+  +D
Sbjct: 64  SPIAGFLQKNKAGGMHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPKD 123

Query: 228 PDGYKFELLE 237
             G   EL +
Sbjct: 124 CGGVLVELEQ 133

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} Length = 134

 Score = 63.2 bits (154), Expect = 2e-12
 Identities = 19/120 (15%), Positives = 37/120 (30%), Gaps = 23/120 (19%)

Query: 247 QVMLRVGDLDRAINFYK----------------KYTIAVMGYGPEDKNAVLELTYNHGVT 290
            V + V DL++A  FYK                  ++  +  G      +  L  +  + 
Sbjct: 8   HVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNTKMELLHPLGLDSPIA 67

Query: 291 EY---DKGNGYAQIAIGTDDVYKTAEAIKLSGGK-ITREPGPLPGINTKITACL--DPDG 344
            +   +K  G   I I  D++      +K    + ++ E          +      D  G
Sbjct: 68  GFLQKNKAGGMHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAH-GKPVIFLHPKDCGG 126

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans} Length = 134

 Score =  120 bits (304), Expect = 9e-34
 Identities = 33/133 (24%), Positives = 51/133 (38%), Gaps = 10/133 (7%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHF----VVE 168
           + + HV   V D DK+ +FY   LG +++R+   P+       L  G  +       + +
Sbjct: 4   KAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDIELEIFGNKLTD 63

Query: 169 LTYNYGVDKYDI---GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGN-TVIAF 224
             Y    ++        G  H    VEDV  +   + A G  +  E           +AF
Sbjct: 64  SNYCAPPERISWPREACGLRHLAFYVEDVEASRQELIALG--IRVEEVRYDDYTGKKMAF 121

Query: 225 IEDPDGYKFELLE 237
             DPDG   EL E
Sbjct: 122 FFDPDGLPLELHE 134

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans} Length = 134

 Score = 55.5 bits (134), Expect = 7e-10
 Identities = 21/124 (16%), Positives = 36/124 (29%), Gaps = 32/124 (25%)

Query: 248 VMLRVGDLDRAINFY----------------KKYTIAVMGYGPEDKNAVLELTYNHGVTE 291
           V L V D D++  FY                +      +  G    +  LE+  N     
Sbjct: 9   VALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCG----DIELEIFGNKLTDS 64

Query: 292 Y-----------DKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACL 340
                        +  G   +A   +DV  + + +   G ++            K+    
Sbjct: 65  NYCAPPERISWPREACGLRHLAFYVEDVEASRQELIALGIRVEE-VRYDDYTGKKMAFFF 123

Query: 341 DPDG 344
           DPDG
Sbjct: 124 DPDG 127

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis} Length = 126

 Score =  118 bits (298), Expect = 5e-33
 Identities = 31/126 (24%), Positives = 46/126 (36%), Gaps = 4/126 (3%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
           + + HV     +   T  FY E LG ++LR+   PE       L  G ++          
Sbjct: 4   KEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQELEI-FISDQF 62

Query: 173 YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTV-IAFIEDPDGY 231
                Y    G  H    VE + + +  +  +G  +  EP  V       + F  DPDG 
Sbjct: 63  PARPSYPEALGLRHLAFKVEHIEEVIAFLNEQG--IETEPLRVDDFTGKKMTFFFDPDGL 120

Query: 232 KFELLE 237
             EL E
Sbjct: 121 PLELHE 126

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis} Length = 126

 Score = 55.1 bits (133), Expect = 1e-09
 Identities = 21/113 (18%), Positives = 37/113 (32%), Gaps = 18/113 (15%)

Query: 248 VMLRVGDLDRAINFYKKY---TIAVMGYGPEDK---------NAVLELTYNH---GVTEY 292
           V +   +     NFY +     +    + PE           +  LE+  +        Y
Sbjct: 9   VAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQELEIFISDQFPARPSY 68

Query: 293 DKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPL-PGINTKITACLDPDG 344
            +  G   +A   + + +    +   G  I  EP  +      K+T   DPDG
Sbjct: 69  PEALGLRHLAFKVEHIEEVIAFLNEQG--IETEPLRVDDFTGKKMTFFFDPDG 119

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis} Length = 282

 Score =  121 bits (305), Expect = 2e-32
 Identities = 53/240 (22%), Positives = 77/240 (32%), Gaps = 26/240 (10%)

Query: 122 VGDLDKTIKFYTECLGMKLLRKRDIPE--DRYTNAFLGYGPEDSHFVVELTYNYGVDKYD 179
             D     KFYT   G        +P     Y+ A L         V  +          
Sbjct: 40  TTDQSAAKKFYTSLFGWGY-DDNPVPGGGGVYSMATLNGEA-----VAAIAPMPPGAPEG 93

Query: 180 IGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG 239
           +   +  + IAV+DV   VD V   GG+V      + G    ++FI DP G    L +  
Sbjct: 94  MPPIWNTY-IAVDDVDAVVDKVVPGGGQVMMPAFDI-GDAGRMSFITDPTGAAVGLWQAN 151

Query: 240 P--------TPEPLCQVMLRVGDLDRAINFYKK---YTIAVMGYGPEDKNAVLELTYNH- 287
                        L    L     D A+ FY+     T + M         VL+      
Sbjct: 152 RHIGATLVNETGTLIWNELLTDKPDLALAFYEAVVGLTHSSMEIAAGQNYRVLKAGDAEV 211

Query: 288 -GVTEYDKGNG--YAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 344
            G  E        +  +    DD   TA     +GG++  EP  +P +  +     DP G
Sbjct: 212 GGCMEPPMPGVPNHWHVYFAVDDADATAAKAAAAGGQVIAEPADIPSV-GRFAVLSDPQG 270

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis} Length = 282

 Score = 66.5 bits (162), Expect = 1e-12
 Identities = 25/142 (17%), Positives = 46/142 (32%), Gaps = 14/142 (9%)

Query: 101 EQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGP 160
            +++   + ++   ++         D  + FY   +G+            Y     G   
Sbjct: 151 NRHIGATLVNETGTLIWNELLTDKPDLALAFYEAVVGLTHSSMEIAAGQNYRVLKAGDAE 210

Query: 161 EDSHFVVELTYNYGVDKYDIGTGFGHFGI--AVEDVAKTVDLVKAKGGKVTREPGPVKGG 218
                        G  +  +     H+ +  AV+D   T     A GG+V  EP  +   
Sbjct: 211 V-----------GGCMEPPMPGVPNHWHVYFAVDDADATAAKAAAAGGQVIAEPADIPSV 259

Query: 219 NTVIAFIEDPDGYKFELLERGP 240
               A + DP G  F +L+  P
Sbjct: 260 -GRFAVLSDPQGAIFSVLKAAP 280

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis} Length = 282

 Score = 46.9 bits (111), Expect = 3e-06
 Identities = 18/107 (16%), Positives = 31/107 (28%), Gaps = 14/107 (13%)

Query: 250 LRVGDLDRAINFYK-----KYTIAVMGYGPE-------DKNAVLELTYNHGVTEYDKGNG 297
           L+  D   A  FY       Y    +  G         +  AV  +              
Sbjct: 38  LQTTDQSAAKKFYTSLFGWGYDDNPVPGGGGVYSMATLNGEAVAAIAPMPPGAPEGMPPI 97

Query: 298 YAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 344
           +    I  DDV    + +   GG++      +     +++   DP G
Sbjct: 98  WN-TYIAVDDVDAVVDKVVPGGGQVMMPAFDIGDA-GRMSFITDPTG 142

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei} Length = 144

 Score =  116 bits (293), Expect = 3e-32
 Identities = 24/133 (18%), Positives = 47/133 (35%), Gaps = 14/133 (10%)

Query: 114 RMLHVVYR--VGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTY 171
           ++L ++ R  V DL+  ++FY E L   +  + +IP+     A +      +        
Sbjct: 4   KILQILSRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQISTILLIA-------- 55

Query: 172 NYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGY 231
             G ++             V+ + K    ++  G ++ R P  V  G      +   DG 
Sbjct: 56  --GSEEALKPFRNTQATFLVDSLDKFKTFLEENGAEIIRGPSKVPTGRN--MTVRHSDGS 111

Query: 232 KFELLERGPTPEP 244
             E +E       
Sbjct: 112 VIEYVEHSKIEAE 124

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei} Length = 144

 Score = 59.1 bits (143), Expect = 5e-11
 Identities = 22/113 (19%), Positives = 36/113 (31%), Gaps = 28/113 (24%)

Query: 248 VMLRVGDLDRAINFYKK----------------YTIAVMGYGPEDKNAVLELTYNHGVTE 291
             L V DL+ A+ FY++                  +A +         +L +    G  E
Sbjct: 10  SRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQIS-------TILLIA---GSEE 59

Query: 292 YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 344
             K     Q     D + K    ++ +G +I R P  +P            DG
Sbjct: 60  ALKPFRNTQATFLVDSLDKFKTFLEENGAEIIRGPSKVPTGRNMT--VRHSDG 110

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A Length = 133

 Score =  110 bits (277), Expect = 6e-30
 Identities = 27/131 (20%), Positives = 51/131 (38%), Gaps = 10/131 (7%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           ++ H+ Y V ++D  +K +     ++          +    F+  G     + VEL    
Sbjct: 7   KVHHIGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVING----GYRVELVAPD 62

Query: 174 GVDK-----YDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKG-GNTVIAFIED 227
           G D         G+   H    VED+ K+++ +   G  + ++        N  +AF+  
Sbjct: 63  GEDSPINKTIKKGSTPYHICYEVEDIQKSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFS 122

Query: 228 PDGYKFELLER 238
            D    ELLE+
Sbjct: 123 TDIGLIELLEK 133

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A Length = 133

 Score = 62.1 bits (151), Expect = 3e-12
 Identities = 20/119 (16%), Positives = 38/119 (31%), Gaps = 26/119 (21%)

Query: 248 VMLRVGDLDRAINFYKK----------------YTIAVMGYGPEDKNAVLELTYNHGVTE 291
           +   V ++D A+  +K+                  I  +  G       +EL    G   
Sbjct: 11  IGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVING----GYRVELVAPDGEDS 66

Query: 292 -----YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITA-CLDPDG 344
                  KG+    I    +D+ K+ E +   G  + ++    P I+ +  A     D 
Sbjct: 67  PINKTIKKGSTPYHICYEVEDIQKSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFSTDI 125

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102} Length = 156

 Score =  104 bits (261), Expect = 2e-27
 Identities = 24/140 (17%), Positives = 43/140 (30%), Gaps = 12/140 (8%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPED--------RYTNAFLGYGPEDSH 164
           R++ H+   V D+  +  FY   LG+  L   ++P          +  N     G     
Sbjct: 18  RKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDL 77

Query: 165 FVVELTYNYGVDKYDIGTGFGHFGIAVED--VAKTVDLVKAKGGKVTREPGPVKGGNTVI 222
           F          +     T   H    ++     + V ++      +    GPV       
Sbjct: 78  FGEPELSPPDPNPEKTFTRAYHLAFDIDPQLFDRAVTVIGENK--IAIAHGPVTRPTGRG 135

Query: 223 AFIEDPDGYKFELLERGPTP 242
            +  DPDG+  E+       
Sbjct: 136 VYFYDPDGFMIEIRCDPEAE 155

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102} Length = 156

 Score = 46.8 bits (111), Expect = 1e-06
 Identities = 17/121 (14%), Positives = 25/121 (20%), Gaps = 24/121 (19%)

Query: 248 VMLRVGDLDRAINFYK------------------------KYTIAVMGYGPEDKNAVLEL 283
           + L V D+  +  FY                         K    +   G          
Sbjct: 23  IALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDLFGEPE 82

Query: 284 TYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPD 343
                            +A   D          +   KI    GP+     +     DPD
Sbjct: 83  LSPPDPNPEKTFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVTRPTGRGVYFYDPD 142

Query: 344 G 344
           G
Sbjct: 143 G 143

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila} Length = 155

 Score =  103 bits (258), Expect = 5e-27
 Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 5/133 (3%)

Query: 108 VKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVV 167
            +S+  R+      V D  K   FYT  LG  +     +  DR+        P+ +  ++
Sbjct: 20  FQSNAMRIHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGADRWLTVVSPEAPDGTQLLL 79

Query: 168 ELTYNYGVDKYD---IGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAF 224
           E + +  V  +    +  G      AV+D+A   + + A G + T+EP  +     V A 
Sbjct: 80  EPSSHAAVTPFKEALVADGIPAASFAVDDIAAEYERLSALGVRFTQEPTDMGPV--VTAI 137

Query: 225 IEDPDGYKFELLE 237
           ++D  G   +L++
Sbjct: 138 LDDTCGNLIQLMQ 150

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila} Length = 155

 Score = 61.3 bits (148), Expect = 1e-11
 Identities = 21/119 (17%), Positives = 40/119 (33%), Gaps = 21/119 (17%)

Query: 245 LCQVMLRVGDLDRAINFY----------------KKYTIAVMGYGPEDKNAVLELTYNHG 288
           +    + V D  +A +FY                 ++   V    P+    +LE + +  
Sbjct: 27  IHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGADRWLTVVSPEAPDGTQLLLEPSSHAA 86

Query: 289 VTEYDK---GNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 344
           VT + +    +G    +   DD+    E +   G + T+EP  +           D  G
Sbjct: 87  VTPFKEALVADGIPAASFAVDDIAAEYERLSALGVRFTQEPTDMGP--VVTAILDDTCG 143

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str} Length = 127

 Score = 97.7 bits (243), Expect = 3e-25
 Identities = 23/127 (18%), Positives = 48/127 (37%), Gaps = 9/127 (7%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           ++ HV     +L++  +FY    G       +     + + FL +   +    +E+    
Sbjct: 3   KIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSF---EDGARLEIMSRT 59

Query: 174 GVD--KYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDP 228
            V         G+ H  I+    E V +  + ++  G  +  EP    G     + + DP
Sbjct: 60  DVTGKTTGENLGWAHIAISTGTKEAVDELTEKLRQDGFAIAGEPRM-TGDGYYESVVLDP 118

Query: 229 DGYKFEL 235
           +G + E+
Sbjct: 119 EGNRIEI 125

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str} Length = 127

 Score = 52.6 bits (126), Expect = 6e-09
 Identities = 29/115 (25%), Positives = 41/115 (35%), Gaps = 19/115 (16%)

Query: 248 VMLRVGDLDRAINFYKKY---TIAVMGYGPEDK----------NAVLELTYNHGVTEYDK 294
           V L   +L++   FY  Y   T   +                  A LE+     VT    
Sbjct: 7   VALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFEDGARLEIMSRTDVTGKTT 66

Query: 295 GN--GYAQIAI---GTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 344
           G   G+A IAI     + V +  E ++  G  I  EP    G     +  LDP+G
Sbjct: 67  GENLGWAHIAISTGTKEAVDELTEKLRQDGFAIAGEPRM-TGDGYYESVVLDPEG 120

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6 Length = 153

 Score = 98.0 bits (244), Expect = 6e-25
 Identities = 29/143 (20%), Positives = 50/143 (34%), Gaps = 20/143 (13%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPE----------D 162
            RM +V   V  LD  I F+ E +G+ L  + ++ E  +     G G +          D
Sbjct: 10  LRMDNVSIVVESLDNAISFFEE-IGLNLEGRANV-EGEWAGRVTGLGSQCVEIAMMVTPD 67

Query: 163 SHFVVELTYNYGVDKYDI-------GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPV 215
            H  +EL+                   G+      VED+ + V  +   G ++  E    
Sbjct: 68  GHSRIELSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEV-VQ 126

Query: 216 KGGNTVIAFIEDPDGYKFELLER 238
              +  + +I   +G    L E 
Sbjct: 127 YENSYRLCYIRGVEGILIGLAEE 149

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6 Length = 153

 Score = 57.9 bits (140), Expect = 1e-10
 Identities = 21/128 (16%), Positives = 45/128 (35%), Gaps = 32/128 (25%)

Query: 248 VMLRVGDLDRAINFYK--------------KYTIAVMGYGPE----------DKNAVLEL 283
           V + V  LD AI+F++              ++   V G G +          D ++ +EL
Sbjct: 15  VSIVVESLDNAISFFEEIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIEL 74

Query: 284 T-YNHGVTEYDKGN------GYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKI 336
           + +    T  D         GY ++    +D+ +    +   G ++  E       + ++
Sbjct: 75  SRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYEN-SYRL 133

Query: 337 TACLDPDG 344
                 +G
Sbjct: 134 CYIRGVEG 141

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus} Length = 145

 Score = 92.0 bits (228), Expect = 8e-23
 Identities = 21/128 (16%), Positives = 47/128 (36%), Gaps = 16/128 (12%)

Query: 121 RVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHF----VVELTYNYGVD 176
              D++ +  F+ + LG ++  +R  P++ +   +L     D            +  G  
Sbjct: 12  YCFDINVSQSFFVDVLGFEVKYER--PDEEF--VYLTLDGVDVMLEGIAGKSRKWLSGDL 67

Query: 177 KYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGP---VKGGNTVIA----FIEDPD 229
           ++ +G+G  +F   V D+      V                 + G+++       ++ PD
Sbjct: 68  EFPLGSGV-NFQWDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTPD 126

Query: 230 GYKFELLE 237
           GY F   +
Sbjct: 127 GYLFRFCQ 134

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus} Length = 145

 Score = 57.3 bits (138), Expect = 2e-10
 Identities = 15/129 (11%), Positives = 31/129 (24%), Gaps = 24/129 (18%)

Query: 249 MLRVGDLDRAINFYKK------------YTIAVMGYGPE----DKNAVLELTYNHGVTEY 292
            L   D++ + +F+                   +         +  A     +  G  E+
Sbjct: 10  ELYCFDINVSQSFFVDVLGFEVKYERPDEEFVYLTLDGVDVMLEGIAGKSRKWLSGDLEF 69

Query: 293 DKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLP-------GINTKITACLDPDGW 345
             G+G         D+    + +  S                       K      PDG+
Sbjct: 70  PLGSGVN-FQWDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTPDGY 128

Query: 346 KSVFVDNLD 354
              F  ++ 
Sbjct: 129 LFRFCQDIH 137

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens} Length = 160

 Score = 88.3 bits (219), Expect = 3e-21
 Identities = 24/134 (17%), Positives = 38/134 (28%), Gaps = 14/134 (10%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVE---- 168
             ++       DLD    FY +  G++++ K           F   G +           
Sbjct: 7   SAIMETALYADDLDAAEAFYRDVFGLEMVLKLP-----GQLVFFKCGRQMLLLFDPQESS 61

Query: 169 LTYNYGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFI 225
                         G GHF        +V +     +A    V        G  +V  +I
Sbjct: 62  RADANNPIPRHGAVGQGHFCFYADDKAEVDEWKTRFEALEIPVEHYHRWPNGSYSV--YI 119

Query: 226 EDPDGYKFELLERG 239
            DP G   E+ E  
Sbjct: 120 RDPAGNSVEVGEGK 133

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens} Length = 160

 Score = 39.8 bits (93), Expect = 3e-04
 Identities = 17/113 (15%), Positives = 24/113 (21%), Gaps = 16/113 (14%)

Query: 248 VMLRVGDLDRAINFYKK-----------YTIAVMGYGPEDKNAV----LELTYNHGVTEY 292
             L   DLD A  FY+              +     G +               +     
Sbjct: 12  TALYADDLDAAEAFYRDVFGLEMVLKLPGQLVFFKCGRQMLLLFDPQESSRADANNPIPR 71

Query: 293 DKGNGYAQIAIGTDDVYKTAEAIK-LSGGKITREPGPLPGINTKITACLDPDG 344
               G        DD  +  E        +I  E        +      DP G
Sbjct: 72  HGAVGQGHFCFYADDKAEVDEWKTRFEALEIPVEHYHRWPNGSYSVYIRDPAG 124

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP} Length = 148

 Score = 85.3 bits (211), Expect = 2e-20
 Identities = 26/118 (22%), Positives = 43/118 (36%), Gaps = 5/118 (4%)

Query: 122 VGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIG 181
             D D+   FY +  G  +    +IP+  Y+    G   E          N G+ +    
Sbjct: 33  FDDGDRARAFYRDAFGWAI---AEIPDMDYSMVTTGPVGESGMPDEPGYINGGMMQRGEV 89

Query: 182 TGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG 239
           T      + VE +   ++ +++ GGK      PV G     A+  D +G    L E  
Sbjct: 90  TTPVVT-VDVESIESALERIESLGGKTVTGRTPV-GNMGFAAYFTDSEGNVVGLWETA 145

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP} Length = 148

 Score = 68.0 bits (166), Expect = 5e-14
 Identities = 19/117 (16%), Positives = 35/117 (29%), Gaps = 15/117 (12%)

Query: 241 TPEPLCQVMLRVGDLDRAINFYKK-------------YTIAVMGYGPEDKNAVLELTYNH 287
               +    +   D DRA  FY+              Y++   G   E          N 
Sbjct: 22  MTGRIVHFEIPFDDGDRARAFYRDAFGWAIAEIPDMDYSMVTTGPVGESGMPDEPGYING 81

Query: 288 GVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 344
           G+ +  +      + +  + +    E I+  GGK      P+  +        D +G
Sbjct: 82  GMMQRGEVTT-PVVTVDVESIESALERIESLGGKTVTGRTPVGNM-GFAAYFTDSEG 136

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8 Length = 139

 Score = 85.0 bits (210), Expect = 3e-20
 Identities = 28/128 (21%), Positives = 47/128 (36%), Gaps = 12/128 (9%)

Query: 116 LHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV 175
           + +    G LD+ I+FY E L +K + +     + Y     G     + + +E T   G 
Sbjct: 13  IRIARPTGQLDEIIRFYEEGLCLKRIGEFSQH-NGYDGVMFGLP--HADYHLEFTQYEGG 69

Query: 176 DKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGP--VKGGNTVIAFIEDPDG 230
               +          V    ++A     +K  G +      P    GG T    IEDPDG
Sbjct: 70  STAPVPHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGGVT----IEDPDG 125

Query: 231 YKFELLER 238
           ++   +  
Sbjct: 126 WRIVFMNS 133

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8 Length = 139

 Score = 53.8 bits (129), Expect = 4e-09
 Identities = 22/117 (18%), Positives = 35/117 (29%), Gaps = 22/117 (18%)

Query: 251 RVGDLDRAINFYKK---------------YTIAVMGYGPEDKNAVLELTYNHGVTEYDKG 295
             G LD  I FY++               Y   + G      +  LE T   G +     
Sbjct: 18  PTGQLDEIIRFYEEGLCLKRIGEFSQHNGYDGVMFGLP--HADYHLEFTQYEGGSTAPVP 75

Query: 296 NGYAQIAI---GTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVF 349
           +  + +        ++      +K  G +      P            DPDGW+ VF
Sbjct: 76  HPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGGVTIE--DPDGWRIVF 130

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str} Length = 126

 Score = 81.0 bits (200), Expect = 5e-19
 Identities = 24/123 (19%), Positives = 46/123 (37%), Gaps = 12/123 (9%)

Query: 116 LHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV 175
           + V   VG  ++   FY E +GM+ + K +  + R    +   G ++ H  VE  +N   
Sbjct: 14  VQVAAPVGCEEEARAFYGETIGMEEIPKPEELKKRGG-CWFKCGNQEIHIGVEQNFNPA- 71

Query: 176 DKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL 235
                     H    V  + +    +  +G +V  +            ++ DP G + E 
Sbjct: 72  -------KRAHPAFYVLKIDEFKQELIKQGIEVIDDH-ARPDVIRF--YVSDPFGNRIEF 121

Query: 236 LER 238
           +E 
Sbjct: 122 MEN 124

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str} Length = 126

 Score = 39.0 bits (91), Expect = 4e-04
 Identities = 18/105 (17%), Positives = 31/105 (29%), Gaps = 10/105 (9%)

Query: 247 QVMLRVGDLDRAINFYKKY----TIAVMGYGPEDKNAVLEL--TYNH-GVTEYDKGNGYA 299
           QV   VG  + A  FY +      I       +      +      H GV +       A
Sbjct: 15  QVAAPVGCEEEARAFYGETIGMEEIPKPEELKKRGGCWFKCGNQEIHIGVEQNFNPAKRA 74

Query: 300 QIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 344
             A     + +  + +   G ++  +    P +        DP G
Sbjct: 75  HPAFYVLKIDEFKQELIKQGIEVIDDH-ARPDV--IRFYVSDPFG 116

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium} Length = 141

 Score = 80.4 bits (199), Expect = 1e-18
 Identities = 28/127 (22%), Positives = 49/127 (38%), Gaps = 19/127 (14%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
           + +  V  +V +L+K+ +FYTE LG +          R+   ++  G      + E   N
Sbjct: 27  KGLFEVAVKVKNLEKSSQFYTEILGFEAGLL--DSARRWNFLWVS-GRAGMVVLQEEKEN 83

Query: 173 YGVDKYDIGTGFGHFGIAVE--DVAKTVDLVKAKGGKVTREPGPVKGGNTVIA--FIEDP 228
           +            HF   VE  ++      +++KG  V    GPV          +  DP
Sbjct: 84  WQQQ---------HFSFRVEKSEIEPLKKALESKGVSVH---GPVNQEWMQAVSLYFADP 131

Query: 229 DGYKFEL 235
           +G+  E 
Sbjct: 132 NGHALEF 138

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2 Length = 139

 Score = 78.0 bits (192), Expect = 8e-18
 Identities = 23/126 (18%), Positives = 41/126 (32%), Gaps = 12/126 (9%)

Query: 115 ML----HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTN-AFLGYGPEDSHFVVEL 169
           M+    H+ + V DL++  +        + +   D  +   +   F   G       + +
Sbjct: 1   MIEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGD------IWV 54

Query: 170 TYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPD 229
               G    +       F I   D  +  + V   G  +      V+G    I F  D D
Sbjct: 55  AIMQGEKLAERSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSIYF-YDDD 113

Query: 230 GYKFEL 235
            + FEL
Sbjct: 114 NHMFEL 119

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygenase, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A Length = 152

 Score = 77.8 bits (191), Expect = 1e-17
 Identities = 26/125 (20%), Positives = 41/125 (32%), Gaps = 8/125 (6%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
            R+ H+V  V D+  TI+FY E LG   +  +           L +G +  +   +    
Sbjct: 22  DRIDHLVLTVSDISTTIRFYEEVLGFSAVTFKQ------NRKALIFGAQKINLHQQEMEF 75

Query: 173 YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIA--FIEDPDG 230
                           I    +   V  +   G  +   P    G    I   +I DPDG
Sbjct: 76  EPKASRPTPGSADLCFITSTPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDG 135

Query: 231 YKFEL 235
              E+
Sbjct: 136 NLIEI 140

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygenase, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A Length = 152

 Score = 43.1 bits (101), Expect = 2e-05
 Identities = 19/109 (17%), Positives = 33/109 (30%), Gaps = 12/109 (11%)

Query: 248 VMLRVGDLDRAINFYKK----------YTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNG 297
           ++L V D+   I FY++               + +G +  N   +               
Sbjct: 27  LVLTVSDISTTIRFYEEVLGFSAVTFKQNRKALIFGAQKINLHQQEMEFEPKASRPTPGS 86

Query: 298 YAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITA--CLDPDG 344
                I +  +      I  +G  I   P    G   +I +    DPDG
Sbjct: 87  ADLCFITSTPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDG 135

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125} Length = 146

 Score = 77.2 bits (190), Expect = 2e-17
 Identities = 29/131 (22%), Positives = 44/131 (33%), Gaps = 13/131 (9%)

Query: 113 RRML-HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTY 171
           + ML HV   V  L+++I F+   LG                    Y    ++ V   T 
Sbjct: 18  QGMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWSR-----GKSYKHGKTYLVFVQTE 72

Query: 172 NYGVD--KYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPG--PVKGGNTVIAF 224
           +       +   TG  H        E V +    +K +G  +  E       G N    F
Sbjct: 73  DRFQTPTFHRKRTGLNHLAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYAVF 132

Query: 225 IEDPDGYKFEL 235
            EDP+  K E+
Sbjct: 133 CEDPNRIKVEI 143

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125} Length = 146

 Score = 39.9 bits (93), Expect = 3e-04
 Identities = 18/115 (15%), Positives = 32/115 (27%), Gaps = 18/115 (15%)

Query: 248 VMLRVGDLDRAINFY---------KKYTIAVMGYGPEDKNAVLELTY---NHGVTEYDKG 295
           V + V  L+ +I F+         + Y     G   +     L             + + 
Sbjct: 24  VEINVDHLEESIAFWDWLLGELGYEDYQSWSRGKSYKHGKTYLVFVQTEDRFQTPTFHRK 83

Query: 296 N-GYAQIAI---GTDDVYKTAEAIKLSGGKITREPGPLPGINTKITAC--LDPDG 344
             G   +A      + V +  + +K  G  I  E            A    DP+ 
Sbjct: 84  RTGLNHLAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYAVFCEDPNR 138

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2 Length = 113

 Score = 75.9 bits (187), Expect = 2e-17
 Identities = 26/126 (20%), Positives = 40/126 (31%), Gaps = 19/126 (15%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
            + H+   V D+    +F  +  G+              NAF      D  F++ L    
Sbjct: 3   GIKHLNLTVADVVAAREFLEKYFGLTC-------SGTRGNAFAVMRDND-GFILTLMKGK 54

Query: 174 GVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDG 230
            V          H G      E V K    +K  G     EP       T   ++E P G
Sbjct: 55  EVQY----PKTFHVGFPQESEEQVDKINQRLKEDG--FLVEPPKHAHAYTF--YVEAPGG 106

Query: 231 YKFELL 236
           +  E++
Sbjct: 107 FTIEVM 112

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP} Length = 136

 Score = 74.7 bits (184), Expect = 1e-16
 Identities = 27/127 (21%), Positives = 41/127 (32%), Gaps = 8/127 (6%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD 176
           HV   V DLD + ++YTE L  K L +     D  + A        S  + E        
Sbjct: 8   HVSLTVRDLDISCRWYTEILDWKELVRGR--GDTTSFAHGVLPGGLSIVLREHDGGGTDL 65

Query: 177 KYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
             +   G  H   +V    D+    + +   G      P        ++AF  D D    
Sbjct: 66  FDETRPGLDHLSFSVESMTDLDVLEERLAKAG--AAFTPTQELPFGWILAF-RDADNIAL 122

Query: 234 ELLERGP 240
           E +    
Sbjct: 123 EAMLGRE 129

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2 Length = 141

 Score = 73.7 bits (181), Expect = 4e-16
 Identities = 30/123 (24%), Positives = 48/123 (39%), Gaps = 11/123 (8%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
           + + H+   V DL K++ F+ E LG+ L  + +      T A+L  G        +    
Sbjct: 3   QSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN------TGAYLTCGDLWVCLSYDEARQ 56

Query: 173 YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 232
             V   +       F +A ED       ++  G  VT        G +   +  DPDG+K
Sbjct: 57  -YVPPQESDYTHYAFTVAEEDFEPLSQRLEQAG--VTIWKQNKSEGASF--YFLDPDGHK 111

Query: 233 FEL 235
            EL
Sbjct: 112 LEL 114

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A Length = 133

 Score = 72.5 bits (178), Expect = 8e-16
 Identities = 23/120 (19%), Positives = 39/120 (32%), Gaps = 8/120 (6%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE-DRYTNAFLGYGPEDSHFVVELTYNYGV 175
           H+   V DL+KT  F       + +              F           + +    G 
Sbjct: 7   HITLIVKDLNKTTAFLQNIFNAEEIYSSGDKTFSLSKEKFFLIAG------LWICIMEGD 60

Query: 176 DKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL 235
              +       F I  E+V +  + +KA G ++ +   P   G     +  D D + FEL
Sbjct: 61  SLQERTYNHIAFQIQSEEVDEYTERIKALGVEM-KPERPRVQGEGRSIYFYDFDNHLFEL 119

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi} Length = 150

 Score = 71.2 bits (174), Expect = 4e-15
 Identities = 25/126 (19%), Positives = 53/126 (42%), Gaps = 9/126 (7%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVE-LTY 171
           +++  +   +GDL+ + +FY E  G        +  +     +   G   + ++V+ L  
Sbjct: 4   QQVAVITLGIGDLEASARFYGEGFGWAP-----VFRNPEIIFYQMNGFVLATWLVQNLQE 58

Query: 172 NYGVDKYDIGTGF--GHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPD 229
           + GV            H   A  +VA  ++ + A GG++ R          +  ++ DPD
Sbjct: 59  DVGVAVTSRPGSMALAHNVRAETEVAPLMERLVAAGGQLLRPADAP-PHGGLRGYVADPD 117

Query: 230 GYKFEL 235
           G+ +E+
Sbjct: 118 GHIWEI 123

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi} Length = 150

 Score = 41.9 bits (98), Expect = 6e-05
 Identities = 22/111 (19%), Positives = 35/111 (31%), Gaps = 15/111 (13%)

Query: 248 VMLRVGDLDRAINFYKK------------YTIAVMGYGPEDKNAVLELTYNHGVTEYDKG 295
           + L +GDL+ +  FY +                 M         V  L  + GV    + 
Sbjct: 9   ITLGIGDLEASARFYGEGFGWAPVFRNPEIIFYQMNGFVLATWLVQNLQEDVGVAVTSRP 68

Query: 296 NGY--AQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 344
                A       +V    E +  +GG++ R     P    +     DPDG
Sbjct: 69  GSMALAHNVRAETEVAPLMERLVAAGGQLLRPADAPPHGGLRGYV-ADPDG 118

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str} Length = 141

 Score = 70.7 bits (173), Expect = 4e-15
 Identities = 23/125 (18%), Positives = 44/125 (35%), Gaps = 7/125 (5%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           R ++ +  V D++++  FY + LG+K+L         +     G+   +   + E  +  
Sbjct: 8   RFVNPIPFVRDINRSKSFYRDRLGLKILED----FGSFVLFETGFAIHEGRSLEETIWRT 63

Query: 174 GVDKYDI-GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 232
             D  +  G           DV      +     ++         G  V     DPDG+ 
Sbjct: 64  SSDAQEAYGRRNMLLYFEHADVDAAFQDIA-PHVELIHPLERQAWGQRVF-RFYDPDGHA 121

Query: 233 FELLE 237
            E+ E
Sbjct: 122 IEVGE 126

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str} Length = 141

 Score = 52.2 bits (125), Expect = 1e-08
 Identities = 15/113 (13%), Positives = 35/113 (30%), Gaps = 15/113 (13%)

Query: 245 LCQVMLRVGDLDRAINFYKK------------YTIAVMGYGPEDKNAVLELTYNHGV-TE 291
               +  V D++R+ +FY+             + +   G+   +  ++ E  +      +
Sbjct: 9   FVNPIPFVRDINRSKSFYRDRLGLKILEDFGSFVLFETGFAIHEGRSLEETIWRTSSDAQ 68

Query: 292 YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 344
              G     +     DV    + I     ++            ++    DPDG
Sbjct: 69  EAYGRRNMLLYFEHADVDAAFQDIA-PHVELIHPLERQAW-GQRVFRFYDPDG 119

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A Length = 148

 Score = 70.5 bits (172), Expect = 7e-15
 Identities = 27/134 (20%), Positives = 49/134 (36%), Gaps = 14/134 (10%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFL--GYGPEDSHFVVELTYNYG 174
           HV Y   D D+  K+Y E  G   L + + PE       +       +    V++     
Sbjct: 12  HVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLN 71

Query: 175 --------VDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKG-GNTVIAFI 225
                   + K++   G  H    V+D+      ++ +G ++  +  P  G G   I F+
Sbjct: 72  DESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDE-PKLGTGGNRINFM 130

Query: 226 --EDPDGYKFELLE 237
             +   G   EL +
Sbjct: 131 HPKSGKGVLIELTQ 144

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans} Length = 141

 Score = 70.0 bits (171), Expect = 7e-15
 Identities = 21/129 (16%), Positives = 44/129 (34%), Gaps = 12/129 (9%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYT---NAFLGYGPEDSHFVVEL 169
             + +V     D+     FY +  G + +     P  R      + +G+   +++ +++L
Sbjct: 7   ADLSYVNIFTRDIVAMSAFYQQVFGFQEIESIRSPIFRGLDTGKSCIGFNAHEAYELMQL 66

Query: 170 TYNYGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIE 226
                    +           V   E V K V +  A G  + + P      +   A + 
Sbjct: 67  A-----QFSETSGIKFLLNFDVDTKEAVDKLVPVAIAAGATLIKAPYET-YYHWYQAVLL 120

Query: 227 DPDGYKFEL 235
           DP+   F +
Sbjct: 121 DPERNVFRI 129

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans} Length = 141

 Score = 41.5 bits (97), Expect = 7e-05
 Identities = 16/116 (13%), Positives = 29/116 (25%), Gaps = 22/116 (18%)

Query: 248 VMLRVGDLDRAINFYKKY---TIAVMGYGPE-------------DKNAVLELTYNHGVTE 291
           V +   D+     FY++            P              + +   EL      +E
Sbjct: 12  VNIFTRDIVAMSAFYQQVFGFQEIESIRSPIFRGLDTGKSCIGFNAHEAYELMQLAQFSE 71

Query: 292 YDKGNGYAQIAIGTD---DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 344
                    +    D    V K       +G  + + P      +      LDP+ 
Sbjct: 72  T--SGIKFLLNFDVDTKEAVDKLVPVAIAAGATLIKAPYETYY-HWYQAVLLDPER 124

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100} Length = 128

 Score = 69.6 bits (170), Expect = 7e-15
 Identities = 26/125 (20%), Positives = 41/125 (32%), Gaps = 12/125 (9%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
            +  +      L   + FY   +G +    +         A              L Y+ 
Sbjct: 6   LITSITINTSHLQGMLGFY-RIIGFQFTASKVDKGSEVHRAVHN------GVEFSL-YSI 57

Query: 174 GVDKYDIGTGFGHFGIAVEDVAKTV-DLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 232
              +          G  + D+ KTV +LVK  G     +P  +  G    A + DPDG+ 
Sbjct: 58  QNPQRSQIPSL-QLGFQITDLEKTVQELVKIPGAMCILDPTDMPDGKK--AIVLDPDGHS 114

Query: 233 FELLE 237
            EL E
Sbjct: 115 IELCE 119

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100} Length = 128

 Score = 52.7 bits (126), Expect = 8e-09
 Identities = 22/108 (20%), Positives = 35/108 (32%), Gaps = 14/108 (12%)

Query: 247 QVMLRVGDLDRAINFYKK----YTIAVMGYGPE-----DKNAVLELTYNHGVTEYDKGNG 297
            + +    L   + FY+     +T + +  G E            L              
Sbjct: 9   SITINTSHLQGMLGFYRIIGFQFTASKVDKGSEVHRAVHNGVEFSLYSIQ--NPQRSQIP 66

Query: 298 YAQIAIGTDDVYKT-AEAIKLSGGKITREPGPLPGINTKITACLDPDG 344
             Q+     D+ KT  E +K+ G     +P  +P     I   LDPDG
Sbjct: 67  SLQLGFQITDLEKTVQELVKIPGAMCILDPTDMPDGKKAI--VLDPDG 112

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp} Length = 135

 Score = 69.8 bits (170), Expect = 8e-15
 Identities = 27/129 (20%), Positives = 39/129 (30%), Gaps = 11/129 (8%)

Query: 110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVEL 169
            +   + H+     DLD+   FY   LG KL R+     DR T  F G        V  L
Sbjct: 5   RNPNDVFHLAIPARDLDEAYDFYVTKLGCKLARR---YPDRITLDFFGD-----QLVCHL 56

Query: 170 TYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREP---GPVKGGNTVIAFIE 226
           +  +  +       FG      +       L K +G     +               F+ 
Sbjct: 57  SDRWDREVSMYPRHFGITFRDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLI 116

Query: 227 DPDGYKFEL 235
           DP     E 
Sbjct: 117 DPSNNLLEF 125

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A Length = 135

 Score = 69.4 bits (170), Expect = 1e-14
 Identities = 32/123 (26%), Positives = 47/123 (38%), Gaps = 14/123 (11%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
             + H+   V DL  +I FY + LG +L  + D        A+L  G        E  Y 
Sbjct: 3   TGLNHLTLAVADLPASIAFYRDLLGFRLEARWD------QGAYLELGSLWLCLSREPQYG 56

Query: 173 YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 232
                Y        FGIA  D A+    ++A G  V         G++   +  DPDG++
Sbjct: 57  GPAADYT----HYAFGIAAADFARFAAQLRAHG--VREWKQNRSEGDSF--YFLDPDGHR 108

Query: 233 FEL 235
            E 
Sbjct: 109 LEA 111

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A Length = 323

 Score = 70.4 bits (172), Expect = 9e-14
 Identities = 44/263 (16%), Positives = 74/263 (28%), Gaps = 44/263 (16%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
            R  ++   V DL K+ +FY + LG+ +  + +         +L    E  H  + L   
Sbjct: 16  VRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE------NTIYLRSLEEFIHHNLVLR-- 67

Query: 173 YGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGP-VKGGNTVIAFIEDP 228
               +         F   V    +V       K  G +  R      KG    +   EDP
Sbjct: 68  ----QGP-IAAVAAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRV-EDP 121

Query: 229 DGYKFEL---------------LERGPTPEPLCQVMLRVGDLDRAINFYK----KYTIAV 269
            G+ +E                L        L        D+ R   + +    + +  +
Sbjct: 122 LGFPYEFFYETEHVERLTQRYDLYSAGELVRLDHFNQVTPDVPRGRAYLEDLGFRVSEDI 181

Query: 270 MGYGPEDKNAVLELTYNHGVTEYDKGNG-----YAQIAIGTDDVYKTAEAIKLSGGKITR 324
                    A +        T    GNG      A       ++ +  + +         
Sbjct: 182 KDSDGVTYAAWMHRKQTVHDTALTGGNGPRMHHVAFATHEKHNIIQICDKMGALRISDRI 241

Query: 325 EPGPLPGINTKITA--CLDPDGW 345
           E GP     +       LDPDG 
Sbjct: 242 ERGPGRHGVSNAFYLYILDPDGH 264

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A Length = 323

 Score = 46.9 bits (111), Expect = 5e-06
 Identities = 23/131 (17%), Positives = 44/131 (33%), Gaps = 21/131 (16%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDI---PEDRYTNAFLGYGPEDSHFVVEL 169
            R+ H      D+ +   +  E LG ++    +     +     A++       H     
Sbjct: 151 VRLDHFNQVTPDVPRGRAYL-EDLGFRV---SEDIKDSDGVTYAAWMHRKQ-TVHDTALT 205

Query: 170 TYNYGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFI- 225
             N        G    H   A     ++ +  D + A       E GP + G +   ++ 
Sbjct: 206 GGN--------GPRMHHVAFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLY 257

Query: 226 -EDPDGYKFEL 235
             DPDG++ E+
Sbjct: 258 ILDPDGHRIEI 268

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3 Length = 307

 Score = 69.9 bits (171), Expect = 1e-13
 Identities = 46/275 (16%), Positives = 84/275 (30%), Gaps = 60/275 (21%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
            R  HV  RV D+ K ++ Y E LG+  + + D  + R    +L    E   F + L   
Sbjct: 6   MRPGHVQLRVLDMSKALEHYVELLGLIEMDRDD--QGR---VYLKAWTEVDKFSLVLR-- 58

Query: 173 YGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREP-GPVKGGNTVIAFIEDP 228
               + D   G    G  V   + + +    + A G  V + P G +      + F + P
Sbjct: 59  ----EAD-EPGMDFMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRF-QAP 112

Query: 229 DGYKFEL----------------------LERGPTPEPLCQVMLRVGDLDRAINFYKKYT 266
            G+ FEL                        +G         ++   +L    + + K  
Sbjct: 113 SGHHFELYADKEYTGKWGLNDVNPEAWPRDLKGMAAVRFDHALMYGDELPATYDLFTK-- 170

Query: 267 IAVMG-------YGPEDKNAVL-----ELTYNHGVTEYDKGNGYAQIAIGT---DDVYKT 311
             V+G                         ++     + +      ++      +D+ + 
Sbjct: 171 --VLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAFIHHPEKGRLHHVSFHLETWEDLLRA 228

Query: 312 AEAIKLSGGKITREPGP-LPGINTKITACLDPDGW 345
           A+ I ++   I   P          I    DP G 
Sbjct: 229 ADLISMTDTSIDIGPTRHGLTHGKTIY-FFDPSGN 262

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3 Length = 307

 Score = 54.8 bits (132), Expect = 1e-08
 Identities = 22/129 (17%), Positives = 38/129 (29%), Gaps = 17/129 (13%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDI---PEDRYTNAFLGYGPEDSHFVVEL 169
            R  H +    +L  T   +T+ LG  L    +            FL      +H V   
Sbjct: 149 VRFDHALMYGDELPATYDLFTKVLGFYL---AEQVLDENGTRVAQFLSLST-KAHDVA-- 202

Query: 170 TYNYGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIE 226
                   +       H    +   ED+ +  DL+      +   P      +    +  
Sbjct: 203 -----FIHHPEKGRLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFF 257

Query: 227 DPDGYKFEL 235
           DP G + E+
Sbjct: 258 DPSGNRNEV 266

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10 Length = 338

 Score = 68.9 bits (168), Expect = 3e-13
 Identities = 35/215 (16%), Positives = 64/215 (29%), Gaps = 38/215 (17%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY--G 174
           H+     + ++   FY   LG++ ++     +D      L YG +      EL++     
Sbjct: 33  HISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMY-HLFYGDKTGSPGTELSFFEIPL 91

Query: 175 VDKYDIGTG-FGHFGIAVEDVA---KTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDG 230
           V +   GT      G+ V          +  +     V             + F ED +G
Sbjct: 92  VGRTYRGTNAITRIGLLVPSEDSLHYWKERFEKFD--VKHSEMTTYANRPALQF-EDAEG 148

Query: 231 YKFELLERGPTPEPLCQ------------------VMLRVGDLDRAINFYKKYTIAVMGY 272
            +  LL          +                  V L V  LD+  +   +      GY
Sbjct: 149 LRLVLLVSNGEKVEHWETWEKSEVPAKHQIQGMGSVELTVRRLDKMASTLTEI----FGY 204

Query: 273 GPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDD 307
               +N          + +  KG  + +I +   D
Sbjct: 205 TEVSRND------QEAIFQSIKGEAFGEIVVKYLD 233

>3eck_A Protein (homoprotocatechuate 2,3-dioxygenase); oxidoreductase, extradiol, FEII, crystal packing; HET: XXG; 1.60A {Brevibacterium fuscum} SCOP: d.32.1.3 d.32.1.3 PDB: 3ecj_A* 3ojn_A* 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* Length = 365

 Score = 68.9 bits (168), Expect = 4e-13
 Identities = 35/170 (20%), Positives = 53/170 (31%), Gaps = 33/170 (19%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
            R  +    V DL K+  FY + LG+ +  + +         +L    E  H  + LT  
Sbjct: 16  LRCAYAELVVTDLAKSRNFYVDVLGLHVSYEDE------NQIYLRSFEEFIHHNLVLT-- 67

Query: 173 YGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTR-EPGPVKGGNTVIAFIEDP 228
               K             V   EDV K     +  G +  R + G VKG    +   EDP
Sbjct: 68  ----KGP-VAALKAMAFRVRTPEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRV-EDP 121

Query: 229 DGYKFEL---------------LERGPTPEPLCQVMLRVGDLDRAINFYK 263
            G+ +E                L        L        D+ R   + +
Sbjct: 122 LGFPYEFFFETTHVERLHMRYDLYSAGELVRLDHFNQVTPDVPRGRKYLE 171

>3eck_A Protein (homoprotocatechuate 2,3-dioxygenase); oxidoreductase, extradiol, FEII, crystal packing; HET: XXG; 1.60A {Brevibacterium fuscum} SCOP: d.32.1.3 d.32.1.3 PDB: 3ecj_A* 3ojn_A* 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* Length = 365

 Score = 42.4 bits (99), Expect = 1e-04
 Identities = 23/128 (17%), Positives = 43/128 (33%), Gaps = 15/128 (11%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
            R+ H      D+ +  K+  E LG ++       E     A++       H       N
Sbjct: 151 VRLDHFNQVTPDVPRGRKYL-EDLGFRVTEDIQDDEGTTYAAWMHRKG-TVHDTALTGGN 208

Query: 173 YGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFI--ED 227
                   G    H   +     ++ +  D + A       E GP + G +   ++   D
Sbjct: 209 --------GPRLHHVAFSTHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILD 260

Query: 228 PDGYKFEL 235
           PD ++ E+
Sbjct: 261 PDNHRIEI 268

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3 Length = 418

 Score = 67.7 bits (164), Expect = 1e-12
 Identities = 42/281 (14%), Positives = 76/281 (27%), Gaps = 67/281 (23%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD 176
           HV     D       ++  LG  L  + D+      +A L        F+    Y +G D
Sbjct: 34  HVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGAD 93

Query: 177 KYDI-----------------GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKG-- 217
                                G       + V D         A G +    P  +    
Sbjct: 94  AATAALPSFSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRGF 153

Query: 218 --------GNTVIAFIEDPDGY-------KFELLERGPTPEP----LCQVMLRVGDLDRA 258
                   G+ V+ ++  PDG         FE +      +        ++  V +L  A
Sbjct: 154 RLAEVELYGDVVLRYVSYPDGAAGEPFLPGFEGVASPGAADYGLSRFDHIVGNVPELAPA 213

Query: 259 INFYKKYT-----------------IAVMGYGPEDKNAVLELTYNHGVT----------- 290
             ++  +T                   +      + +  + L  N  V            
Sbjct: 214 AAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPVHGTKRRSQIQTF 273

Query: 291 -EYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLP 330
            ++  G G   +A+ +DDV +T   ++        E    P
Sbjct: 274 LDHHGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAPP 314

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii} Length = 339

 Score = 67.0 bits (163), Expect = 1e-12
 Identities = 23/179 (12%), Positives = 53/179 (29%), Gaps = 42/179 (23%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
             +           +T+ F+T+ LGM +  +         + +L    +   + +++T  
Sbjct: 10  AHLARAELFSPKPQETLDFFTKFLGMYVTHREG------QSVYLRGYEDPYPWSLKIT-- 61

Query: 173 YGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPD 229
                     G GH  +     E + +    +       T        G T     + PD
Sbjct: 62  -----EAPEAGMGHAAMRTSSPEALERRAKSLTDGNVDGTWSEDQFGYGKTF--EYQSPD 114

Query: 230 GYKFELL------------------------ERGPTPEPLCQVMLRVGDLDRAINFYKK 264
           G+  +LL                         +G   + +  + L   D+    + +++
Sbjct: 115 GHNLQLLWEAEKYVAPPELRSKILTRPSKKPLQGIPVKRIDHLNLMSSDVTAVKDSFER 173

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii} Length = 339

 Score = 51.9 bits (124), Expect = 1e-07
 Identities = 15/128 (11%), Positives = 35/128 (27%), Gaps = 14/128 (10%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTN--AFLGYGPEDSHFVVELT 170
           +R+ H+     D+      +   LG +     +   D      A++              
Sbjct: 152 KRIDHLNLMSSDVTAVKDSFERHLGFRT---TERVVDGNVEIGAWMSSNLLGHEVACMRD 208

Query: 171 YNYGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIED 227
              G           H        +     V++ +    ++   P       +   ++ +
Sbjct: 209 MTGG------HGKLHHLAFFYGTGQHNIDAVEMFRDYDIQIEAGPDKHGITQSQFLYVFE 262

Query: 228 PDGYKFEL 235
           P G + EL
Sbjct: 263 PGGNRIEL 270

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens} Length = 147

 Score = 63.9 bits (155), Expect = 1e-12
 Identities = 24/125 (19%), Positives = 47/125 (37%), Gaps = 8/125 (6%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
           RR+ H+V  V  +  T  FY++ LGM+++  ++          L +G +  +        
Sbjct: 26  RRLDHIVMTVKSIKDTTMFYSKILGMEVMTFKE------DRKALCFGDQKFNLHEVGKEF 79

Query: 173 YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKG--GNTVIAFIEDPDG 230
                + +        I    + + +  +KA    +   P P  G  G  +  +  DPD 
Sbjct: 80  EPKAAHPVPGSLDICLITEVPLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDR 139

Query: 231 YKFEL 235
              E+
Sbjct: 140 NLIEV 144

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A* Length = 133

 Score = 63.0 bits (153), Expect = 2e-12
 Identities = 26/126 (20%), Positives = 46/126 (36%), Gaps = 10/126 (7%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
             + H+V  V D+  T  FY + LGMK +              L +G +  +   +L   
Sbjct: 9   SHLDHLVLTVADIPTTTNFYEKVLGMKAVSFGA------GRIALEFGHQKINL-HQLGNE 61

Query: 173 YGVDKYDIGTGFGHF-GIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIA--FIEDPD 229
           +     ++  G      I    ++  +  V+ +G  +   P    G    I   +  DPD
Sbjct: 62  FEPKAQNVRVGSADLCFITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPD 121

Query: 230 GYKFEL 235
           G   E+
Sbjct: 122 GNLIEV 127

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans} Length = 310

 Score = 66.1 bits (161), Expect = 2e-12
 Identities = 51/241 (21%), Positives = 80/241 (33%), Gaps = 45/241 (18%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFL-GYGPEDSHFVVELTY 171
             + +V Y V D D    FY +  G++ + +         NA+    G  D H VV+L  
Sbjct: 7   TEIRYVGYGVKDFDAEKAFYADVWGLEPVGEDA------NNAWFKAQG-ADEHHVVQLR- 58

Query: 172 NYGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPV--KGGNTVIAFIE 226
                + D         +A     DV      V+A G KV  EP  +   GG     F  
Sbjct: 59  -----RAD-ENRIDVIALAADSRSDVDALRASVEAAGCKVASEPAVLATPGGGYGFRF-F 111

Query: 227 DPDGYKFEL------------LERGPTPEPLCQVMLRVGDLDRAINFYKKYTIAVMGYGP 274
            PDG  FE+                  P  +  ++L   +    + F+      V+G+  
Sbjct: 112 SPDGLLFEVSSDVAKGAKRDLARWEGVPVKISHIVLHSPNHQDMVKFFTD----VLGFKV 167

Query: 275 EDK-------NAVLELTYNHGVTEYDKG-NGYAQIAIGTDDVYKTAEAIKLSGGKITREP 326
            D               +   +       N  A   +  DD+ + A  +K+ G  I   P
Sbjct: 168 SDWLGDFMCFLRCNSAHHRIAILPGPPCLNHVAYDMLSVDDMMRGAHRLKVKGIDIGWGP 227

Query: 327 G 327
           G
Sbjct: 228 G 228

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A* Length = 252

 Score = 65.1 bits (158), Expect = 2e-12
 Identities = 28/181 (15%), Positives = 54/181 (29%), Gaps = 28/181 (15%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
             +  +     +LD+ + FYT  LG + + ++           +  G   S        +
Sbjct: 25  TSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA------DAFTIQLG--VSQIQFRAAAD 76

Query: 173 YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIA---FIEDPD 229
                Y I        IA     +    +   G  +T             A   ++EDP 
Sbjct: 77  GTKPFYHIA-----INIAANHFQEGKAWLSGFGELLTENDEDQAYFPFFNAYSCYVEDPS 131

Query: 230 GYKFELLERGPTPEP------------LCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK 277
           G   EL+ R                  + ++ +   D+++A    K+  + V     E  
Sbjct: 132 GNIIELISRQQAAPVLDKPFSADQLLSIGEINITTSDVEQAATRLKQAELPVKLDQIEPA 191

Query: 278 N 278
            
Sbjct: 192 G 192

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A* Length = 309

 Score = 64.9 bits (158), Expect = 5e-12
 Identities = 40/190 (21%), Positives = 62/190 (32%), Gaps = 43/190 (22%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
            R  H   RV +L++ I FY   LG+     RD     Y   F  +   D    +     
Sbjct: 7   LRPGHAQVRVLNLEEGIHFYRNVLGLVET-GRDDQGRVY---FKCWDERDHSCYI----- 57

Query: 173 YGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREP-GPVKGGNTVIAFIEDP 228
             + + D   G   FG  V     + K    ++A G   TR P G +      + F E P
Sbjct: 58  --IREAD-TAGIDFFGFKVLDKATLEKLDADLQAYGLTTTRIPAGEMLETGERVRF-ELP 113

Query: 229 DGYKFEL----------------------LERGPTPEPLCQVMLRVGDLDRAINFYKKYT 266
            G+  EL                       E G  P  L   +L   ++      + +  
Sbjct: 114 SGHLIELYAEKTCVGNGISEVNPAPWNAQREHGIAPIQLDHCLLYGPNIAEVQKIFTE-- 171

Query: 267 IAVMGYGPED 276
             V+G+   +
Sbjct: 172 --VLGFYLVE 179

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A* Length = 309

 Score = 52.5 bits (126), Expect = 6e-08
 Identities = 23/129 (17%), Positives = 39/129 (30%), Gaps = 16/129 (12%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKL-LRKRDIPEDRYTNAFLGYGPEDSHFVVELTY 171
            ++ H +    ++ +  K +TE LG  L  R      D     +L    +          
Sbjct: 150 IQLDHCLLYGPNIAEVQKIFTEVLGFYLVERVLSPDGDSDMGIWLSCSHKVHDIAFV--- 206

Query: 172 NYGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPG--PVKGGNTVIAFIE 226
                +Y       H    +   E V +  D++      V   P    V        +  
Sbjct: 207 -----EYPEKGKLHHCSFLLESWEQVLRAGDIMSMNEVNVDIGPTRHGV--TRGCTIYAW 259

Query: 227 DPDGYKFEL 235
           DP G +FE 
Sbjct: 260 DPSGNRFET 268

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP} Length = 137

 Score = 61.7 bits (150), Expect = 6e-12
 Identities = 22/125 (17%), Positives = 38/125 (30%), Gaps = 6/125 (4%)

Query: 121 RVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDI 180
              D D+ + +     G +LL ++        +A L  G      +V  T          
Sbjct: 9   AYTDPDRAVDWLVRVFGFRLLLRQP-AIGTIRHADLDTG--GGIVMVRRTGEPYTVSCAG 65

Query: 181 GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE--R 238
           G       + V DV +      A G  + +       G      + D +G+ +E     R
Sbjct: 66  GHTCKQVIVWVSDVDEHFMRSTAAGADIVQPLQDKPWGLRQ-YLVRDLEGHLWEFTRHLR 124

Query: 239 GPTPE 243
              P 
Sbjct: 125 DVPPR 129

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP} Length = 137

 Score = 41.7 bits (98), Expect = 4e-05
 Identities = 17/111 (15%), Positives = 35/111 (31%), Gaps = 16/111 (14%)

Query: 248 VMLRVGDLDRAINFYKK---YTIAVMGYGPEDKNAVLELTYNHGV-----------TEYD 293
           V L   D DRA+++  +   + + ++           +L    G+               
Sbjct: 6   VELAYTDPDRAVDWLVRVFGFRL-LLRQPAIGTIRHADLDTGGGIVMVRRTGEPYTVSCA 64

Query: 294 KGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 344
            G+   Q+ +   DV +       +G  I +     P    +     D +G
Sbjct: 65  GGHTCKQVIVWVSDVDEHFMRSTAAGADIVQPLQDKPWGLRQYL-VRDLEG 114

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2 Length = 119

 Score = 60.1 bits (146), Expect = 1e-11
 Identities = 22/116 (18%), Positives = 35/116 (30%), Gaps = 13/116 (11%)

Query: 121 RVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDI 180
              +  +   FY + LGM +        D          P ++H  V      G      
Sbjct: 14  ATPEPARAQAFYGDILGMPVAM------DHGWIVTHA-SPLEAHAQVSFAREGGS----- 61

Query: 181 GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL 236
           GT      I V++  +    +   G  +   P     G     F+ DP G    +L
Sbjct: 62  GTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAWGVQR-LFLRDPFGKLINIL 116

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2 Length = 119

 Score = 39.0 bits (91), Expect = 4e-04
 Identities = 18/106 (16%), Positives = 29/106 (27%), Gaps = 17/106 (16%)

Query: 249 MLRVGDLDRAINFYKKY----------TIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGY 298
            +   +  RA  FY              I      P + +A +         E   G   
Sbjct: 12  NIATPEPARAQAFYGDILGMPVAMDHGWIVTHA-SPLEAHAQVSF-----AREGGSGTDV 65

Query: 299 AQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 344
             ++I  D+  +    I  +G  I   P        +     DP G
Sbjct: 66  PDLSIEVDNFDEVHARILKAGLPIEYGPVTEAW-GVQRLFLRDPFG 110

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A* Length = 138

 Score = 60.6 bits (147), Expect = 2e-11
 Identities = 26/134 (19%), Positives = 45/134 (33%), Gaps = 10/134 (7%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGP----EDSHFVVEL 169
           R+      V D+ K+++FY + LG+++    +     +T A L  G     +    V   
Sbjct: 4   RISLFAVVVEDMAKSLEFYRK-LGVEI--PAEADSAPHTEAVLDGGIRLAWDTVETVRSY 60

Query: 170 TYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPD 229
              +                    V K    +   G +   +P     G    A ++DPD
Sbjct: 61  DPEWQAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRY-AIVKDPD 119

Query: 230 GYKFELLERGPTPE 243
           G   +L    P P 
Sbjct: 120 GNVVDLFA--PLPL 131

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A* Length = 138

 Score = 42.1 bits (99), Expect = 4e-05
 Identities = 17/115 (14%), Positives = 32/115 (27%), Gaps = 18/115 (15%)

Query: 247 QVMLRVGDLDRAINFYKKYTIAVMGYGPEDKNAVLELTYN--------------HGVTEY 292
              + V D+ +++ FY+K  + +        +    L                     + 
Sbjct: 7   LFAVVVEDMAKSLEFYRKLGVEIPAEADSAPHTEAVLDGGIRLAWDTVETVRSYDPEWQA 66

Query: 293 DKGNGYAQIAIGT---DDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 344
             G     IA        V K    +  +G +   +P        +     DPDG
Sbjct: 67  PTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVW-GQRYAIVKDPDG 120

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A* Length = 297

 Score = 61.1 bits (148), Expect = 9e-11
 Identities = 30/176 (17%), Positives = 51/176 (28%), Gaps = 40/176 (22%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
           R + ++ + V D+     F T+ LG+      D               +   + + +   
Sbjct: 3   RSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD------NGDLFRI--DSRAWRIAVQ-- 52

Query: 173 YGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGP---VKGGNTVIAFIE 226
                          G  V     +A+  D +K  G  VT         +G   +I F  
Sbjct: 53  -----QGEVDDLAFAGYEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITF-A 106

Query: 227 DPDGYKFEL------------------LERGPTPEPLCQVMLRVGDLDRAINFYKK 264
           DP G   E+                         + L   +  V D D+A+ FY  
Sbjct: 107 DPFGLPLEIYYGASEVFEKPFLPGAAVSGFLTGEQGLGHFVRCVPDSDKALAFYTD 162

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A* Length = 297

 Score = 45.6 bits (108), Expect = 1e-05
 Identities = 32/175 (18%), Positives = 56/175 (32%), Gaps = 20/175 (11%)

Query: 69  FGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKT 128
                +      G  +E     +       +    V  ++  + + + H V  V D DK 
Sbjct: 98  GVTGLITFADPFGLPLEIYYGASEVFEKPFLPGAAVSGFLTGE-QGLGHFVRCVPDSDKA 156

Query: 129 IKFYTECLGMKL---LRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFG 185
           + FYT+ LG +L   +  +  P+      FL       H +        +  + +     
Sbjct: 157 LAFYTDVLGFQLSDVIDMKMGPDVTVPAYFLHCNE-RHHTLA-------IAAFPLPKRIH 208

Query: 186 HFGIAVE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFI--EDPDGYKFEL 235
           HF + V    DV    D V A G   +      +  N  +       P G + E 
Sbjct: 209 HFMLEVASLDDVGFAFDRVDADGLITS---TLGRHTNDHMVSFYASTPSGVEVEY 260

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A Length = 302

 Score = 60.8 bits (147), Expect = 1e-10
 Identities = 33/253 (13%), Positives = 73/253 (28%), Gaps = 53/253 (20%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
             + ++   V D D    F T+ LG+++L + +  +DR    +L    +  H  + +   
Sbjct: 8   IELGYMGISVKDPDAWKSFATDMLGLQVLDEGE--KDR---FYLRM--DYWHHRIVVH-- 58

Query: 173 YGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTR---EPGPVKGGNTVIAFIE 226
                ++      + G  V    +       +   G K+          +    ++   E
Sbjct: 59  -----HNGQDDLEYLGWRVAGKPEFEALGQKLIDAGYKIRICDKVEAQERMVLGLMKT-E 112

Query: 227 DPDGYKFEL-------------------LERGPTPEPLCQVMLRVGDLDRAINFYKK--- 264
           DP G   E+                    +     + L   ++R  D+  A  FY     
Sbjct: 113 DPGGNPTEIFWGPRIDMSNPFHPGRPLHGKFVTGDQGLGHCIVRQTDVAEAHKFYSLLGF 172

Query: 265 ----YTIAVMGYGPEDKNAVLELTYNH------GVTEYDKGNGYAQIAIGTDDVYKTAEA 314
                    +  G   + + +             +    + N         +D+  T + 
Sbjct: 173 RGDVEYRIPLPNGMTAELSFMHCNARDHSIAFGAMPAAKRLNHLMLEYTHMEDLGYTHQQ 232

Query: 315 IKLSGGKITREPG 327
              +   I  + G
Sbjct: 233 FVKNEIDIALQLG 245

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A Length = 302

 Score = 44.6 bits (105), Expect = 2e-05
 Identities = 26/188 (13%), Positives = 49/188 (26%), Gaps = 21/188 (11%)

Query: 57  FQLGAAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDW-VKSDKRRM 115
            ++   +          +K     G+  E    G     SN       L     +  + +
Sbjct: 92  IRICDKVEAQERMVLGLMKTEDPGGNPTEIFW-GPRIDMSNPFHPGRPLHGKFVTGDQGL 150

Query: 116 LHVVYRVGDLDKTIKFYTECLGMKL---LRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
            H + R  D+ +  KFY+  LG +     R           +F+       H +      
Sbjct: 151 GHCIVRQTDVAEAHKFYSL-LGFRGDVEYRIPLPNGMTAELSFMHCNA-RDHSIA----- 203

Query: 173 YGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPG--PVKGGNTVIAFIED 227
                        H  +     ED+  T          +  + G         +  +   
Sbjct: 204 --FGAMPAAKRLNHLMLEYTHMEDLGYTHQQFVKNEIDIALQLGIHAN--DKALTFYGAT 259

Query: 228 PDGYKFEL 235
           P G+  E 
Sbjct: 260 PSGWLIEP 267

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp} Length = 335

 Score = 61.3 bits (148), Expect = 1e-10
 Identities = 27/175 (15%), Positives = 50/175 (28%), Gaps = 27/175 (15%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAF---LGYGPEDSHFVVELTYNY 173
           H+   VG   +   FY   LG++L+++    +D  T         G   +          
Sbjct: 11  HITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGNEGGKPGTIITFFPWAGA 70

Query: 174 GVDKYDIGT-GFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 232
                  G  G   + +    +A     ++      T      + G   + F +DP G  
Sbjct: 71  RQGVIGDGQVGVTSYVVPKGAMAFWEKRLEKFNVPYT---KIERFGEQYVEF-DDPHGLH 126

Query: 233 FELLERGPTPEPLCQ---------------VMLRVGDLDRAINFYKKYTIAVMGY 272
            E++ER                          L     D+  +  +     +MG 
Sbjct: 127 LEIVEREEGEANTWTFGEVTPDVAIKGFGGATLLSEQPDKTADLLEN----IMGL 177

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp} Length = 335

 Score = 51.3 bits (122), Expect = 2e-07
 Identities = 23/188 (12%), Positives = 44/188 (23%), Gaps = 17/188 (9%)

Query: 56  LFQLGAAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRM 115
           L +      +   FG + ++     G  +E          + T  E           +  
Sbjct: 99  LEKFNVPYTKIERFGEQYVEFDDPHGLHLEIVEREEGEANTWTFGEVTP----DVAIKGF 154

Query: 116 LHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV 175
                     DKT       +G++ + K                 +  + +       G 
Sbjct: 155 GGATLLSEQPDKTADLLENIMGLERVGKEG------DFVRYRSAGDIGNVIDLKLTPIGR 208

Query: 176 DKYDIGTGFGHFGIAVEDVA---KTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 232
            +   GT   H      D          + + G  VT              +  +     
Sbjct: 209 GQMGAGT-VHHIAWRANDDEDQLDWQRYIASHGYGVT---PVRDRNYFNAIYFREHGEIL 264

Query: 233 FELLERGP 240
           FE+    P
Sbjct: 265 FEIATDPP 272

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis} Length = 159

 Score = 57.9 bits (140), Expect = 2e-10
 Identities = 27/144 (18%), Positives = 55/144 (38%), Gaps = 23/144 (15%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
           R  + +   V D++++++ Y E  G++  +     +    +      P  +   +   + 
Sbjct: 18  RNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAF-FE 76

Query: 173 YGVDKYDI-----------------GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPV 215
            G  + ++                 G G  H    V+D+ + V+ +  KG KV ++ G  
Sbjct: 77  LGPLQLELIEPDENPSTWREFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQK-GDF 135

Query: 216 KGGNTVIAFI--EDPDGYKFELLE 237
           +GG    A+I          ELLE
Sbjct: 136 EGGR--YAYIDTLRALKVMIELLE 157

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2 Length = 118

 Score = 55.2 bits (133), Expect = 6e-10
 Identities = 19/126 (15%), Positives = 34/126 (26%), Gaps = 14/126 (11%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRK-RDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
            +  +   V ++ +        L  K         +    +  L      +H V    + 
Sbjct: 5   NLNQLDIIVSNVPQVCADLEHILDKKADYANDGFAQFTIGSHCLMLS--QNHLVPLENFQ 62

Query: 173 YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 232
            G+             I VEDV +    +   G KV   P     G      ++ P G  
Sbjct: 63  SGI----------IIHIEVEDVDQNYKRLNELGIKVLHGPTVTDWGTES-LLVQGPAGLV 111

Query: 233 FELLER 238
            +    
Sbjct: 112 LDFYRM 117

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2 Length = 118

 Score = 44.8 bits (106), Expect = 3e-06
 Identities = 20/110 (18%), Positives = 39/110 (35%), Gaps = 16/110 (14%)

Query: 245 LCQVMLRVGDLDRAINFYKKYTIAVMG----YGPED------KNAVLELTYNHGVTEYDK 294
           L Q+ + V ++ +     +     ++     Y  +        +  L L+ NH V   + 
Sbjct: 6   LNQLDIIVSNVPQVCADLEH----ILDKKADYANDGFAQFTIGSHCLMLSQNHLVPLENF 61

Query: 295 GNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 344
            +G   I I  +DV +  + +   G K+   P       T+      P G
Sbjct: 62  QSG-IIIHIEVEDVDQNYKRLNELGIKVLHGPTVTDW-GTESLLVQGPAG 109

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A Length = 305

 Score = 58.1 bits (140), Expect = 9e-10
 Identities = 30/253 (11%), Positives = 69/253 (27%), Gaps = 53/253 (20%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
             + ++   V +LD    +    +GM++     + +      +L       H  + L   
Sbjct: 5   TELGYLGLSVSNLDAWRDYAAGIMGMQV-----VDDGEDDRIYLRMD--RWHHRIVLH-- 55

Query: 173 YGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTR---EPGPVKGGNTVIAFIE 226
                 D      + G  V    ++ +  + +K  G             +    ++    
Sbjct: 56  -----ADGSDDLAYIGWRVAGPVELDELAEQLKNAGIPFEVASDADAAERRVLGLVKL-H 109

Query: 227 DPDGYKFELL-------------------ERGPTPEPLCQVMLRVGDLDRAINFYKK--- 264
           DP G   E+                    +     + L  +++R  D++ A  FY+    
Sbjct: 110 DPGGNPTEIFYGPQVDTSSPFHPGRPMFGKFVTEGQGLGHIIIREDDVEEATRFYRLLGL 169

Query: 265 ----YTIAVMGYGPEDKNAVLELTYNH---GVTEYDKGNGYAQIAIGT---DDVYKTAEA 314
                    +  G       +     H                + I     DD+    + 
Sbjct: 170 EGAVEYKFALPNGAVGTPVFMHCNDRHHSLAFGVGPMDKRINHLMIEYTHLDDLGYAHDL 229

Query: 315 IKLSGGKITREPG 327
           ++     +T + G
Sbjct: 230 VRQQKIDVTLQIG 242

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A Length = 305

 Score = 50.4 bits (120), Expect = 3e-07
 Identities = 25/186 (13%), Positives = 60/186 (32%), Gaps = 17/186 (9%)

Query: 57  FQLGAAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRML 116
           F++ +    +       +KL    G+  E      +  +S     + +     ++ + + 
Sbjct: 89  FEVASDADAAERRVLGLVKLHDPGGNPTEIFYGPQVDTSSPFHPGRPMFGKFVTEGQGLG 148

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTN--AFLGYGPEDSHFVVELTYNYG 174
           H++ R  D+++  +FY        +  +    +       F+       H +        
Sbjct: 149 HIIIREDDVEEATRFYRLLGLEGAVEYKFALPNGAVGTPVFMHCND-RHHSLA------- 200

Query: 175 VDKYDIGTGFGHFGIAVE---DVAKTVDLVKAKGGKVTREPG--PVKGGNTVIAFIEDPD 229
                +     H  I      D+    DLV+ +   VT + G         +  +  +P 
Sbjct: 201 FGVGPMDKRINHLMIEYTHLDDLGYAHDLVRQQKIDVTLQIGKHSN--DEALTFYCANPS 258

Query: 230 GYKFEL 235
           G+ +E 
Sbjct: 259 GWLWEP 264

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A* Length = 393

 Score = 58.0 bits (139), Expect = 2e-09
 Identities = 47/274 (17%), Positives = 77/274 (28%), Gaps = 62/274 (22%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN---- 172
            V + VG+  +   FY   +G + L  R +                  FV+    N    
Sbjct: 14  SVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQGKIVFVLSSALNPWNK 73

Query: 173 -YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVK--GGNTVIAFIEDPD 229
             G      G G       VED    V   + +G K+ REP   +   G    A ++   
Sbjct: 74  EMGDHLVKHGDGVKDIAFEVEDCDYIVQKARERGAKIMREPWVEQDKFGKVKFAVLQTYG 133

Query: 230 GYKFELLERG-----------------PTPEPLCQVMLRV----------GDLDRAINFY 262
                L+E+                  P    L +  L +           ++  A  +Y
Sbjct: 134 DTTHTLVEKMNYIGQFLPGYEAPAFMDPLLPKLPKCSLEMIDHIVGNQPDQEMVSASEWY 193

Query: 263 KKYT----------------------IAVMGYGPEDKNAVLELTYNHGVT------EYDK 294
            K                        I V  Y    K  + E       +      +Y+ 
Sbjct: 194 LKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGKKKSQIQEYVDYNG 253

Query: 295 GNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGP 328
           G G   IA+ T+D+      ++  G +    P  
Sbjct: 254 GAGVQHIALKTEDIITAIRHLRERGLEFLSVPST 287

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A* Length = 300

 Score = 56.1 bits (135), Expect = 4e-09
 Identities = 29/186 (15%), Positives = 56/186 (30%), Gaps = 41/186 (22%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
           R + ++     D+    ++  + LGM   +     E      +L      +  VV     
Sbjct: 4   RSLGYLRIEATDMAAWREYGLKVLGMVEGKGAP--EGA---LYLRMDDFPARLVVV---- 54

Query: 173 YGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPG---PVKGGNTVIAFIE 226
                          G      E + +  + +  +G             +  + +I F  
Sbjct: 55  -----PGEHDRLLEAGWECANAEGLQEIRNRLDLEGTPYKEATAAELADRRVDEMIRF-A 108

Query: 227 DPDGYKFEL-------LERGPTPEP---------LCQVMLRVGDLDRAINFYKKYTIAVM 270
           DP G   E+         R  +P           +  V+L   D   A++FY+     V+
Sbjct: 109 DPSGNCLEVFHGTALEHRRVVSPYGHRFVTGEQGMGHVVLSTRDDAEALHFYRD----VL 164

Query: 271 GYGPED 276
           G+   D
Sbjct: 165 GFRLRD 170

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A* Length = 300

 Score = 51.1 bits (122), Expect = 2e-07
 Identities = 23/182 (12%), Positives = 50/182 (27%), Gaps = 25/182 (13%)

Query: 67  HFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLD 126
                + ++     G+ +E      +                 + ++ M HVV    D  
Sbjct: 98  DRRVDEMIRFADPSGNCLEVFHGTALEHRRVV---SPYGHRFVTGEQGMGHVVLSTRDDA 154

Query: 127 KTIKFYTECLGMKL--------LRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKY 178
           + + FY + LG +L               +               H +            
Sbjct: 155 EALHFYRDVLGFRLRDSMRLPPQMVGRPADGPPAWLRFFGCNPRHHSL-------AFLPM 207

Query: 179 DIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPG--PVKGGNTVIAFIEDPDGYKF 233
              +G  H  + V   +DV   +D    +   ++   G         +  +++ P G+  
Sbjct: 208 PTSSGIVHLMVEVEQADDVGLCLDRALRRKVPMSATLGRHVN--DLMLSFYMKTPGGFDI 265

Query: 234 EL 235
           E 
Sbjct: 266 EF 267

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila} Length = 148

 Score = 54.0 bits (129), Expect = 4e-09
 Identities = 23/133 (17%), Positives = 42/133 (31%), Gaps = 15/133 (11%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD 176
            V++ V +  K+ +FY   L  + +         +    +  G       + L     ++
Sbjct: 9   LVLFYVKNPAKSEEFYKNLLDTQPIES----SPTFAMFVMKTG-----LRLGLWAQEEIE 59

Query: 177 -KYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 232
            K     G       V   E V +       K   + + P  +  G T      DPD ++
Sbjct: 60  PKAHQTGGGMELSFQVNSNEMVDEIHRQWSDKEISIIQPPTQMDFGYT--FVGVDPDEHR 117

Query: 233 FELLERGPTPEPL 245
             +     T E L
Sbjct: 118 LRIFCLKRTAENL 130

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens} Length = 144

 Score = 53.1 bits (127), Expect = 6e-09
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 15/123 (12%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD 176
             +  V +   + +FY   LG+  +         ++   L  G       + L   + V+
Sbjct: 28  FTILYVDNPPASTQFYKALLGVDPVES----SPTFSLFVLANG-----MKLGLWSRHTVE 78

Query: 177 -KYDIGTGFGHFGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 232
            K  +  G G     VE+   V +T    KA G  + ++P  ++ G T      DPD ++
Sbjct: 79  PKASVTGGGGELAFRVENDAQVDETFAGWKASGVAMLQQPAKMEFGYTF--TAADPDSHR 136

Query: 233 FEL 235
             +
Sbjct: 137 LRV 139

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B* Length = 292

 Score = 53.5 bits (128), Expect = 3e-08
 Identities = 23/176 (13%), Positives = 52/176 (29%), Gaps = 38/176 (21%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
            R+ ++ + V D+     F T+ +G+               A      +   + + +   
Sbjct: 3   ERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG------DAALYRA--DQRAWRIAVQ-- 52

Query: 173 YGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFI--ED 227
                        + G+ V     + +  D ++  G   TR    +     V+  +  +D
Sbjct: 53  -----PGELDDLAYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQD 107

Query: 228 PDGYKFEL------------------LERGPTPEPLCQVMLRVGDLDRAINFYKKY 265
           P G   E+                         + +   +  V D  +A+ FY + 
Sbjct: 108 PFGLPLEIYYGPAEIFHEPFLPSAPVSGFVTGDQGIGHFVRCVPDTAKAMAFYTEV 163

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B* Length = 292

 Score = 51.2 bits (122), Expect = 2e-07
 Identities = 34/173 (19%), Positives = 53/173 (30%), Gaps = 16/173 (9%)

Query: 69  FGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKT 128
                L L    G  +E    G              +    +  + + H V  V D  K 
Sbjct: 98  KVMGLLCLQDPFGLPLEIYY-GPAEIFHEPFLPSAPVSGFVTGDQGIGHFVRCVPDTAKA 156

Query: 129 IKFYTECLGMKL---LRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFG 185
           + FYTE LG  L   +  +  PE      FL       H +        +  + I     
Sbjct: 157 MAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNG-RHHTIA-------LAAFPIPKRIH 208

Query: 186 HFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL 235
           HF +     +DV    D + A  G++T   G      T+  + + P       
Sbjct: 209 HFMLQANTIDDVGYAFDRLDAA-GRITSLLGRHTNDQTLSFYADTPSPMIEVE 260

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 51.4 bits (122), Expect = 3e-07
 Identities = 48/303 (15%), Positives = 90/303 (29%), Gaps = 103/303 (33%)

Query: 17  TYNKTSLPSQSSLK-LSPFCVNNDGGNNISYCYSTSRRLALFQLGAAIPQSHFFGAKALK 75
             +K +   +SSL  L P              +    RL++F   A IP         L 
Sbjct: 351 NCDKLTTIIESSLNVLEP--------AEYRKMF---DRLSVFPPSAHIP------TILLS 393

Query: 76  LLRAEGSTIEASTSGNMAPTSNTVTEQNV----------LDW-VKSDKRRMLHVVYRVGD 124
           L+  +    +     N     + V +Q            L+  VK +    LH       
Sbjct: 394 LIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALH------- 446

Query: 125 LDKTIKFYTECLGMKLLRKRD------IPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKY 178
               +  Y       + +  D         D+Y  + +G+     H          ++  
Sbjct: 447 -RSIVDHY------NIPKTFDSDDLIPPYLDQYFYSHIGH-----HL-------KNIEHP 487

Query: 179 DIGTGFGH-FGIAVEDVAKTVDL--VKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL 235
           +  T F   F          +D   ++    K+  +        +++  ++    YK  +
Sbjct: 488 ERMTLFRMVF----------LDFRFLEQ---KIRHDSTAWNASGSILNTLQQLKFYKPYI 534

Query: 236 LERGPTPEPLCQVMLRVGDLDRAINFYK---------KYT----IAVMGYGPEDKNAVLE 282
            +  P  E L      V  +   ++F           KYT    IA+M     +  A+ E
Sbjct: 535 CDNDPKYERL------VNAI---LDFLPKIEENLICSKYTDLLRIALM----AEDEAIFE 581

Query: 283 LTY 285
             +
Sbjct: 582 EAH 584

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.3 bits (101), Expect = 1e-04
 Identities = 36/185 (19%), Positives = 65/185 (35%), Gaps = 42/185 (22%)

Query: 191 VEDVAKTVDLVKAKGGKVTREPGPV------------KGGNTVIAFIED---PDGYKFEL 235
           V+D+ K++ L K +   +      V            K    V  F+E+    + YKF L
Sbjct: 38  VQDMPKSI-LSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRIN-YKF-L 94

Query: 236 LE--RGPTPEPLCQVMLRVGDLDRAIN---FYKKYTIAVMGYGPED----KNAVLELTYN 286
           +   +    +P     + +   DR  N    + KY +       +     + A+LEL   
Sbjct: 95  MSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNV----SRLQPYLKLRQALLELRPA 150

Query: 287 HGVTEY-DKGNGYAQIAIGTDDVYKTAEAIKLSGGKI-------TREPGPLPGINTKITA 338
             V      G+G   +A+   DV  + +       KI          P  +  +  K+  
Sbjct: 151 KNVLIDGVLGSGKTWVAL---DVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLY 207

Query: 339 CLDPD 343
            +DP+
Sbjct: 208 QIDPN 212

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A* Length = 132

 Score = 48.1 bits (114), Expect = 3e-07
 Identities = 20/125 (16%), Positives = 37/125 (29%), Gaps = 18/125 (14%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD 176
             +  V +++++  FY      + +        RY               +   ++ G +
Sbjct: 16  LQLVYVSNVERSTDFYRFIFKKEPVFVT----PRYVAFPSSGD------ALFAIWSGGEE 65

Query: 177 KYDIGTGFGHFGIAVEDVA------KTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDG 230
                  F   GI +                K+    V +EP     G T    I DPDG
Sbjct: 66  PVAEIPRFSEIGIMLPTGEDVDKLFNEWTKQKSHQIIVIKEPYTDVFGRTF--LISDPDG 123

Query: 231 YKFEL 235
           +   +
Sbjct: 124 HIIRV 128

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} Length = 134

 Score = 47.5 bits (113), Expect = 5e-07
 Identities = 16/121 (13%), Positives = 30/121 (24%), Gaps = 15/121 (12%)

Query: 121 RVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDI 180
            + D+ + +  + + LG +L  +          A+L         + E       D    
Sbjct: 14  HIPDMQEALTLFCDTLGFELKYRHS------NYAYLELSGCGLRLLEEPARKIIPD---- 63

Query: 181 GTGFGHFGIAVEDVAKTVDLVKAK----GGKVTREPGPVKGGNTVIAFIEDPDGYKFELL 236
           G       I V D+      +                 +  G      +  PDG      
Sbjct: 64  GIARVAICIDVSDIDSLHTKLSPALENLPADQVEPLKNMPYGQREF-QVRMPDGDWLNFT 122

Query: 237 E 237
            
Sbjct: 123 A 123

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans} Length = 148

 Score = 47.4 bits (112), Expect = 7e-07
 Identities = 24/127 (18%), Positives = 40/127 (31%), Gaps = 10/127 (7%)

Query: 119 VYRVGDLDKTIKFYTECLGMKL---LRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV 175
           VY   D+DKT+K++ E LG       R  +   D             +H      ++   
Sbjct: 26  VYFTKDMDKTVKWFEEILGWSGDIVARDDEGFGDYGCVFDYPSEVAVAHLTPFRGFHLFK 85

Query: 176 DKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK--- 232
            +           + +E +      VK  G     +      G    + I   DG     
Sbjct: 86  GE---PIKGVAGFMMIEGIDALHKYVKENGWDQISDIYTQPWGARECS-ITTTDGCILRF 141

Query: 233 FELLERG 239
           FE ++ G
Sbjct: 142 FESIQEG 148

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A Length = 126

 Score = 46.4 bits (110), Expect = 1e-06
 Identities = 23/128 (17%), Positives = 39/128 (30%), Gaps = 20/128 (15%)

Query: 119 VYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKY 178
                D D T  FY   LG  ++ +            L  G     F       +     
Sbjct: 8   NLPSRDFDSTAAFYER-LGFGIVFRDA------GWMILQRGDLMLEF-------FAHPGL 53

Query: 179 DIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGG------NTVIAFIEDPDGYK 232
           D    +    + ++D+A+     K+ G + T    P             +A + DPDG  
Sbjct: 54  DPLASWFSCCLRLDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTL 113

Query: 233 FELLERGP 240
             L++   
Sbjct: 114 LRLIQNEL 121

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A Length = 424

 Score = 48.8 bits (115), Expect = 1e-06
 Identities = 48/320 (15%), Positives = 93/320 (29%), Gaps = 78/320 (24%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD 176
           H+ +  GD     + ++  LGM+   K D+      +A       D  F+    Y+  + 
Sbjct: 28  HIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLS 87

Query: 177 KYDI-----------------------GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREP- 212
             +I                       G G     I VED      +  A G   +  P 
Sbjct: 88  AGEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPI 147

Query: 213 --------GPVKG-GNTVIAFIE-----------DPDGYKFELLERGPTP---EPLCQVM 249
                     VK  G+ V+ ++             P   + E     P       L   +
Sbjct: 148 VLNEAVTIAEVKLYGDVVLRYVSYKAEDTEKSEFLPGFERVEDASSFPLDYGIRRLDHAV 207

Query: 250 LRVGDLDRAINFYKKYT-----------------IAVMGYGPEDKNAVLELTYNHGVT-- 290
             V +L  A+ +   +T                   +        + ++ L  N  V   
Sbjct: 208 GNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPINEPVHGT 267

Query: 291 ----------EYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACL 340
                     E+++G G   +A+ ++D+++T   ++        +   +P         L
Sbjct: 268 KRKSQIQTYLEHNEGAGLQHLALMSEDIFRTLREMRKRSSIGGFD--FMPSPPPTYYQNL 325

Query: 341 DPDGWKSVFVDNLDFLKELE 360
                  +  D +   +EL 
Sbjct: 326 KKRVGDVLSDDQIKECEELG 345

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A Length = 166

 Score = 45.0 bits (106), Expect = 6e-06
 Identities = 19/136 (13%), Positives = 32/136 (23%), Gaps = 11/136 (8%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLL-------RKRDIPEDRYTNAFLGYGPEDSHFVVEL 169
            ++     +   + FY    G           RK D       ++ L             
Sbjct: 29  MLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSFVVCDVS 88

Query: 170 TYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPD 229
           +          G+G   F +  +D    V      G                   + DP 
Sbjct: 89  SLPGFSTAKSEGSGV-TFLLGTKDAEAAVAKAVDAGAVKVEVTEAEVELGFK-GKVTDPF 146

Query: 230 GYKFELLERG--PTPE 243
           G  +   E+    T E
Sbjct: 147 GVTWIFAEKKTVITDE 162

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3 Length = 381

 Score = 45.6 bits (107), Expect = 1e-05
 Identities = 46/274 (16%), Positives = 75/274 (27%), Gaps = 62/274 (22%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD 176
            VV+ VG+  +   +Y+   GM+L+            A        + FV+         
Sbjct: 25  AVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIKPATP 84

Query: 177 KYDI--------GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREP--GPVKGGNTVIAFIE 226
                       G G     I V D           G +   EP     + G  V+A I 
Sbjct: 85  WGHFLADHVAEHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIA 144

Query: 227 DPDGYKFELLERG--------------PTPEPLCQVMLRV----------GDLDRAINFY 262
                +  L++R               P  EP      +           G ++  + FY
Sbjct: 145 TYGKTRHTLVDRTGYDGPYLPGYVAAAPIVEPPAHRTFQAIDHCVGNVELGRMNEWVGFY 204

Query: 263 KKYTI-----------------AVMGYGPEDKNAVLELTYNHGVTEYDK----------- 294
            K                    A+M     D    ++   N       K           
Sbjct: 205 NKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPALAKKKSQIDEYLEFYG 264

Query: 295 GNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGP 328
           G G   IA+ T D+ +T   ++ +G +    P  
Sbjct: 265 GAGVQHIALNTGDIVETVRTMRAAGVQFLDTPDS 298

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A Length = 122

 Score = 40.2 bits (94), Expect = 1e-04
 Identities = 18/121 (14%), Positives = 30/121 (24%), Gaps = 24/121 (19%)

Query: 119 VYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKY 178
           V    D+   + F+ + LG +     D  +  +  A +  G    H           +  
Sbjct: 10  VLTAVDVPANVSFWVDTLGFEK----DFGDRDF--AGVRRGDIRLHI-------SRTEHQ 56

Query: 179 DIGTGFGHFGIAVEDV--------AKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDG 230
            +      + I V D                    G      G    G      + DP G
Sbjct: 57  IVADNTSAW-IEVTDPDALHEEWARAVSTDYADTSGPAMTPVGESPAGREF--AVRDPAG 113

Query: 231 Y 231
            
Sbjct: 114 N 114

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis} Length = 357

 Score = 40.9 bits (95), Expect = 4e-04
 Identities = 39/269 (14%), Positives = 74/269 (27%), Gaps = 64/269 (23%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYT-------NAFLGYGPEDSHFVVEL 169
           +V   V +L+     + +     +       + R            L     D H     
Sbjct: 8   YVEMYVENLEVAAFSWVDKYAFAVAGTSRSADHRSIALRQGQVTLVLTEPTSDRHPAAAY 67

Query: 170 TYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPD 229
              +G    DI        +A  DVA   +     G +  R PG         A I    
Sbjct: 68  LQTHGDGVADI-------AMATSDVAAAYEAAVRAGAEAVRAPGQHSEAAVTTATIGGFG 120

Query: 230 GYKFELLERG------------------PTPEPLCQVML-------RVGDLDRAINFYKK 264
                L++R                        +  + +         GDL   + +Y++
Sbjct: 121 DVVHTLIQRDGTSAELPPGFTGSMDVTNHGKGDVDLLGIDHFAICLNAGDLGPTVEYYER 180

Query: 265 YTIAV------MGYGPEDKNAVLELTYNHGVT-------------------EYDKGNGYA 299
                      +  G +  N+ +  + +  VT                   +  +G G  
Sbjct: 181 ALGFRQIFDEHIVVGAQAMNSTVVQSASGAVTLTLIEPDRNADPGQIDEFLKDHQGAGVQ 240

Query: 300 QIAIGTDDVYKTAEAIKLSGGKITREPGP 328
            IA  ++D  +  +A+   G +  + PG 
Sbjct: 241 HIAFNSNDAVRAVKALSERGVEFLKTPGA 269

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A Length = 124

 Score = 38.4 bits (89), Expect = 6e-04
 Identities = 16/120 (13%), Positives = 29/120 (24%), Gaps = 8/120 (6%)

Query: 121 RVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDI 180
              D+ + ++F+T+ LG          ED +  A +                   +    
Sbjct: 12  TARDVAEAVEFWTDRLGFSR----VFVEDDF--AGVVRDDVTLFISAVQDQVVPDNTQAW 65

Query: 181 GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP 240
               G   +  E         +   G    E      G      + DP G     +    
Sbjct: 66  VWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWGREF--ALRDPAGNCVHFVAEEQ 123

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	360
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	100.0
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.97
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.97
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.97
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.97
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.97
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.97
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.97
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.97
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.97
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.97
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.97
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.96
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.96
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.96
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.94
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.92
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.89
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.87
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.86
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.85
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	99.85
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	99.81
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	99.81
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	99.81
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	99.8
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	99.8
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	99.79
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	99.78
2p25_A	126	Glyoxalase family protein; structural genomics, MC	99.77
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	99.77
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	99.77
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	99.76
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	99.76
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	99.76
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	99.76
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	99.75
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	99.74
3ghj_A	141	Putative integron gene cassette protein; integron	99.74
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.74
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	99.74
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	99.73
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	99.73
3huh_A	152	Virulence protein STM3117; structural genomics, ny	99.72
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.71
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	99.71
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	99.71
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	99.71
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.7
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	99.7
2i7r_A	118	Conserved domain protein; structural genomics cons	99.7
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	99.7
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.7
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	99.69
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	99.68
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.68
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	99.68
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.68
1nki_A	135	Probable fosfomycin resistance protein; potassium	99.68
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	99.67
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	99.67
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.67
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	99.67
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	99.66
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	99.66
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	99.66
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	99.66
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	99.66
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	99.66
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.65
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.65
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	99.65
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.64
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	99.64
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	99.64
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	99.63
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	99.63
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.63
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	99.63
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	99.62
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	99.61
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.61
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	99.6
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	99.6
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	99.6
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.59
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	99.59
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	99.59
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.58
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.57
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	99.57
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	99.57
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	99.57
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	99.57
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	99.56
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	99.55
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	99.55
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	99.55
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	99.55
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	99.54
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	99.53
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	99.53
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	99.51
2p25_A	126	Glyoxalase family protein; structural genomics, MC	99.51
2i7r_A	118	Conserved domain protein; structural genomics cons	99.5
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	99.49
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	99.49
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	99.49
3huh_A	152	Virulence protein STM3117; structural genomics, ny	99.48
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	99.47
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	99.47
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	99.47
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	99.46
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	99.46
3ghj_A	141	Putative integron gene cassette protein; integron	99.46
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	99.46
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	99.46
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	99.45
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	99.45
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	99.45
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	99.44
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	99.44
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	99.43
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	99.43
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.43
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	99.42
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	99.42
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	99.42
1nki_A	135	Probable fosfomycin resistance protein; potassium	99.42
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	99.42
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	99.42
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	99.41
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	99.41
1u6l_A	149	Hypothetical protein; structural genomics, PSI, pr	99.41
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	99.41
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	99.41
1xy7_A	166	Unknown protein; structural genomics, protein stru	99.4
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	99.39
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	99.39
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	99.39
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	99.39
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	99.38
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	99.37
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	99.37
2zw5_A	301	Bleomycin acetyltransferase; dimer, two domains; H	99.35
1u7i_A	136	Hypothetical protein; structural genomics, PA1358,	99.34
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	99.34
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	99.32
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	99.3
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.19
1xy7_A	166	Unknown protein; structural genomics, protein stru	99.16
2zw5_A	301	Bleomycin acetyltransferase; dimer, two domains; H	99.16
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.15
1tsj_A	139	Conserved hypothetical protein; structural genomic	99.11
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.05
1u7i_A	136	Hypothetical protein; structural genomics, PA1358,	99.03
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	99.02
3oms_A	138	PHNB protein; structural genomics, PSI-2, protein	99.01
3l20_A	172	Putative uncharacterized protein; hypothetical pro	99.01
1u6l_A	149	Hypothetical protein; structural genomics, PSI, pr	99.0
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	98.98
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	98.96
1tsj_A	139	Conserved hypothetical protein; structural genomic	98.61
3oms_A	138	PHNB protein; structural genomics, PSI-2, protein	98.54
3l20_A	172	Putative uncharacterized protein; hypothetical pro	98.32
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	98.09
1u69_A	163	Hypothetical protein; structural genomics, MSCG, p	97.89
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	97.71
3opy_B	941	6-phosphofructo-1-kinase beta-subunit; ATP binding	96.82
3opy_B	941	6-phosphofructo-1-kinase beta-subunit; ATP binding	96.1
1u69_A	163	Hypothetical protein; structural genomics, MSCG, p	95.96
3opy_A	989	6-phosphofructo-1-kinase alpha-subunit; ATP bindin	85.4

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=100.00  E-value=1.9e-32  Score=260.69  Aligned_cols=236  Identities=31%  Similarity=0.571  Sum_probs=184.0

Q ss_pred             ccccccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCC-----------CCCeEEEEEeeCCCCceEEEEEEecCCC
Q 018138          107 WVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIP-----------EDRYTNAFLGYGPEDSHFVVELTYNYGV  175 (360)
Q Consensus       107 ~~~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~-----------~~~~~~~~l~~g~~~~~~~lel~~~~~~  175 (360)
                      |..|++++|.||+|.|+|++++++||+++|||++..+...+           +..+..+++.+++....+.+++......
T Consensus        20 ~~~M~~~~i~Hv~l~V~Dle~s~~FY~~vLGl~~~~~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~~~~~~leL~~~~~~   99 (330)
T 3zi1_A           20 FQSMAARRALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAELTYNYGV   99 (330)
T ss_dssp             GGGCSCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEC---------CCCSCEEEEEEESSCTTTCCEEEEEEETTC
T ss_pred             eeecccceeeEEEEEeCCHHHHHHHHHHhcCCeEEEEeecchhhhhhccCCcCCceEEEEEecCCCCCccEEEEeccCCC
Confidence            55677889999999999999999999999999998876654           4456788888887666778999876555


Q ss_pred             CCCcCCCcceEEEEEECCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCC-CCCCceeceeeecC
Q 018138          176 DKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP-TPEPLCQVMLRVGD  254 (360)
Q Consensus       176 ~~~~~g~g~~hi~f~V~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~-~~~~i~hv~L~V~D  254 (360)
                      ..+..+.|+.|++|.|+|+   .++++++|+++...|    .+   .+|++||||+.|||++... .+..+.|+.|.|+|
T Consensus       100 ~~~~~~~g~~hiaf~V~d~---~~~l~~~G~~~~~~~----~~---~~~~~DPdG~~iel~~~~~~~~~~i~hv~L~v~D  169 (330)
T 3zi1_A          100 GDYKLGNDFMGITLASSQA---VSNARKLEWPLTEVA----EG---VFETEAPGGYKFYLQNRSLPQSDPVLKVTLAVSD  169 (330)
T ss_dssp             CCCCBCSSEEEEEEECHHH---HHHHHHHTCCCEEEE----TT---EEEEECTTSCEEEEESSCCTTSCSEEEEEEEESC
T ss_pred             CccccCCCeeEEEEECchH---HHHHHHcCCceeccC----Cc---eEEEECCCCCEEEEEecCCCCCCceeEEEEECCC
Confidence            5555677999999999987   678889999987543    22   5899999999999999764 46789999999999


Q ss_pred             HHHHHHHhhhcceEEeeeccCCC---ccEEEEEEeCCc---------ccccCCCCeeEEEEEeC--CHHHHHHHHHHcCC
Q 018138          255 LDRAINFYKKYTIAVMGYGPEDK---NAVLELTYNHGV---------TEYDKGNGYAQIAIGTD--DVYKTAEAIKLSGG  320 (360)
Q Consensus       255 ~e~a~~FY~~~~~~~lG~~~~~~---~~~l~l~~~~~~---------~~~~~g~g~~hiaf~V~--Dl~~~~~~l~~~G~  320 (360)
                      ++++.+||++    +|||+....   .....+......         .....+.+++|++|.|+  |+++++++++++|+
T Consensus       170 l~~a~~FY~~----vLG~~~~~~~~~~~~~~l~~g~~~~~l~l~~~~~~~~~~~~~~hiaf~v~~~dld~~~~rl~~~G~  245 (330)
T 3zi1_A          170 LQKSLNYWCN----LLGMKIYENDEEKQRALLGYADNQCKLELQGVKGGVDHAAAFGRIAFSCPQKELPDLEDLMKRENQ  245 (330)
T ss_dssp             HHHHHHHHHH----TTCCEEEEEETTTTEEEEESSTTSCEEEEEECSSCCCCBTTCCEEEEEECGGGHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHH----hcCCEEEeeccCCcEEEEEeCCceEEEEECCCCCCCCCCCCCceEEEEEEcccHHHHHHHHHHcCC
Confidence            9999999999    999875321   101112211110         01123457789999994  79999999999999


Q ss_pred             eEeeCCccc--CC-CCcEEEEEECCCCCeEEEEcCcccc
Q 018138          321 KITREPGPL--PG-INTKITACLDPDGWKSVFVDNLDFL  356 (360)
Q Consensus       321 ~i~~~p~~~--~~-~~~~~~~~~DPdG~~iel~~~~~~~  356 (360)
                      ++..++.+.  ++ ...+.+||+|||||.|||++..+|.
T Consensus       246 ~i~~~~~~~~~pg~~g~~~~~f~DPdG~~iEl~~~~~~~  284 (330)
T 3zi1_A          246 KILTPLVSLDTPGKATVQVVILADPDGHEICFVGDEAFR  284 (330)
T ss_dssp             EEEEEEEEECCTTSCCEEEEEEECTTCCEEEEEEHHHHH
T ss_pred             cEecCceecccCCCCceEEEEEECCCCCEEEEEEecccc
Confidence            998877653  21 1258999999999999999987765

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.97  E-value=3.4e-30  Score=242.39  Aligned_cols=231  Identities=18%  Similarity=0.200  Sum_probs=169.6

Q ss_pred             cccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEE
Q 018138          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGI  189 (360)
Q Consensus       110 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f  189 (360)
                      +.+++|+||.|.|+|++++++||+++|||++..+..  +.   .+++.......++.+.+.+..       ..++.|++|
T Consensus         4 ~~i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~--~~---~~~l~~~~~~~~~~l~l~~~~-------~~~~~h~a~   71 (309)
T 3hpy_A            4 TGVLRPGHAQVRVLNLEEGIHFYRNVLGLVETGRDD--QG---RVYFKCWDERDHSCYIIREAD-------TAGIDFFGF   71 (309)
T ss_dssp             CSEEEEEEEEEEESSHHHHHHHHHHTSCCEEEEECT--TS---CEEEECTTCCBSCSEEEEECS-------SCEEEEEEE
T ss_pred             cccceeeEEEEEcCCHHHHHHHHHhccCCEEEEEcC--CC---eEEEEeccCCCceEEEEEeCC-------CCceeEEEE
Confidence            347899999999999999999999999999986532  11   255654222223445555431       237899999


Q ss_pred             EECC---HHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCC----------------------CCCC
Q 018138          190 AVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP----------------------TPEP  244 (360)
Q Consensus       190 ~V~D---ld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~----------------------~~~~  244 (360)
                      .|+|   +++++++|+++|+++...+.....+....+||+|||||.|||++...                      .+.+
T Consensus        72 ~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~f~DPdG~~iel~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  151 (309)
T 3hpy_A           72 KVLDKATLEKLDADLQAYGLTTTRIPAGEMLETGERVRFELPSGHLIELYAEKTCVGNGISEVNPAPWNAQREHGIAPIQ  151 (309)
T ss_dssp             EESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBCBCCCSSCSBSCCSCCGGGGSSSCCSE
T ss_pred             EECCHHHHHHHHHHHHhCCCceeeccCCccCCCeeEEEEECCCCCEEEEEEccceecccccccCCCCCccccCCCcccce
Confidence            9986   99999999999999876554311222346999999999999997532                      1346


Q ss_pred             ceeceeeecCHHHHHHHhhhcceEEeeeccCCC--------ccEEEEEEeCCccc-----ccCCCCeeEEEEEeCCHH--
Q 018138          245 LCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK--------NAVLELTYNHGVTE-----YDKGNGYAQIAIGTDDVY--  309 (360)
Q Consensus       245 i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~--------~~~l~l~~~~~~~~-----~~~g~g~~hiaf~V~Dl~--  309 (360)
                      ++||.|.|+|++++.+||++    +|||+..+.        .....+........     .+...+++|++|.|+|++  
T Consensus       152 i~Hv~l~v~D~~~~~~FY~~----~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Hiaf~v~d~~~v  227 (309)
T 3hpy_A          152 LDHCLLYGPNIAEVQKIFTE----VLGFYLVERVLSPDGDSDMGIWLSCSHKVHDIAFVEYPEKGKLHHCSFLLESWEQV  227 (309)
T ss_dssp             EEEEEEEESCHHHHHHHHHH----TSCCEEEEEEECSSSCSEEEEEEESSSSSCSEEEEECSSTTEEEEEEEECSSHHHH
T ss_pred             eeeEEEEeCCHHHHHHHHHH----hcCCEEEEEEecCCCCceEEEEEecCCCceeEEEecCCCCCceeEEEEECCCHHHH
Confidence            89999999999999999999    999975321        11122222211111     112245899999998765  


Q ss_pred             -HHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCcccc
Q 018138          310 -KTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFL  356 (360)
Q Consensus       310 -~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~  356 (360)
                       +++++|+++|+++..+|.+++.+..+++||+|||||.|||+.....+
T Consensus       228 ~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~g~~~  275 (309)
T 3hpy_A          228 LRAGDIMSMNEVNVDIGPTRHGVTRGCTIYAWDPSGNRFETFMGGYHP  275 (309)
T ss_dssp             HHHHHHHHHTTCCBSSCSEECSSSSEEEEEEECTTSCEEEEEEECCCC
T ss_pred             HHHHHHHHHCCCEEEeCCccCCCCccEEEEEECCCCCEEEEEeCCccc
Confidence             57789999999999999887776678999999999999998775444

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.97  E-value=4.8e-30  Score=244.94  Aligned_cols=228  Identities=13%  Similarity=0.162  Sum_probs=173.2

Q ss_pred             cccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEE
Q 018138          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGI  189 (360)
Q Consensus       110 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f  189 (360)
                      ..+++|+||.|.|+|++++++||+++|||++..+.+   .   .+++.......++.+.+....       ..++.|++|
T Consensus         7 ~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~---~---~~~l~~~~~~~~~~l~l~~~~-------~~g~~~~af   73 (339)
T 3lm4_A            7 FDIAHLARAELFSPKPQETLDFFTKFLGMYVTHREG---Q---SVYLRGYEDPYPWSLKITEAP-------EAGMGHAAM   73 (339)
T ss_dssp             GSEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEEET---T---EEEEECTTCSSSCSEEEEECS-------SCEEEEEEE
T ss_pred             CCCcEEEEEEEEeCCHHHHHHHHHhcCCCEEEEecC---C---EEEEEecCCCCceEEEEeeCC-------CCCcceEEE
Confidence            467899999999999999999999999999987632   1   355555333233455555432       346899999


Q ss_pred             EECC---HHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCC------------------------CC
Q 018138          190 AVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP------------------------TP  242 (360)
Q Consensus       190 ~V~D---ld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~------------------------~~  242 (360)
                      .|+|   +++++++|+++|+++...+.. .+++ ..++|+|||||.|||+....                        .+
T Consensus        74 ~v~~~~dld~~~~~l~~~G~~~~~~~~~-~~~~-~~~~f~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  151 (339)
T 3lm4_A           74 RTSSPEALERRAKSLTDGNVDGTWSEDQ-FGYG-KTFEYQSPDGHNLQLLWEAEKYVAPPELRSKILTRPSKKPLQGIPV  151 (339)
T ss_dssp             EESSHHHHHHHHHHHHHTTCCEEEECCS-TTBC-CEEEEECTTCCEEEEECCBCCCCCCGGGCCSSTTCSSCCCSBSSCC
T ss_pred             EeCCHHHHHHHHHHHHHCCCceeeccCC-CCce-EEEEEECCCCCEEEEEEeeeEcCCCccccccccCcccccCCCCCCc
Confidence            9997   999999999999998876652 2323 36999999999999986421                        23


Q ss_pred             CCceeceeeecCHHHHHHHhhhcceEEeeeccCCCc------cEEEEEEeCCcc--cc-----cCCCCeeEEEEEeCC--
Q 018138          243 EPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDKN------AVLELTYNHGVT--EY-----DKGNGYAQIAIGTDD--  307 (360)
Q Consensus       243 ~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~~------~~l~l~~~~~~~--~~-----~~g~g~~hiaf~V~D--  307 (360)
                      .+++|+.|.|+|++++.+||++    +|||+..+..      ....+..+....  ..     ....+++|++|.|+|  
T Consensus       152 ~~l~Hv~l~v~D~~~a~~FY~~----vLG~~~~~~~~~~g~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~Hiaf~v~d~~  227 (339)
T 3lm4_A          152 KRIDHLNLMSSDVTAVKDSFER----HLGFRTTERVVDGNVEIGAWMSSNLLGHEVACMRDMTGGHGKLHHLAFFYGTGQ  227 (339)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHH----HHCCEEEEEEEETTEEEEEEEESSSSSCSEEEEECTTSCCSEEEEEEEECCCHH
T ss_pred             ceeeeEEEEcCCHHHHHHHHHH----hCCCeEEEEEecCCcEEEEEEEeCCCceEEEEeccCCCCCCceeEEEEEeCCHH
Confidence            5799999999999999999999    9999754321      122222222111  11     123468999999999  


Q ss_pred             -HHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCcccc
Q 018138          308 -VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFL  356 (360)
Q Consensus       308 -l~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~  356 (360)
                       +++++++|+++|+++..+|+++..+..+++||+|||||.|||+...+.+
T Consensus       228 ~v~~~~~~l~~~G~~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~~~~  277 (339)
T 3lm4_A          228 HNIDAVEMFRDYDIQIEAGPDKHGITQSQFLYVFEPGGNRIELFGEAGYL  277 (339)
T ss_dssp             HHHHHHHHHHHTTCEEEEEEEEETGGGEEEEEEECTTSCEEEEECCCCCC
T ss_pred             HHHHHHHHHHHCCCeEEeCCcccccCCceEEEEEcCCCCEEEEEEcCCee
Confidence             8889999999999999999888776678999999999999998665544

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.97  E-value=3.1e-29  Score=238.95  Aligned_cols=232  Identities=14%  Similarity=0.117  Sum_probs=166.0

Q ss_pred             cccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCC-CCeEEEEEeeCCCCceEEEEEEecCCCCCCc-CCCcceEE
Q 018138          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE-DRYTNAFLGYGPEDSHFVVELTYNYGVDKYD-IGTGFGHF  187 (360)
Q Consensus       110 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~-~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~-~g~g~~hi  187 (360)
                      +++.+|+||+|.|+|++++++||+++|||+++.+....+ ......++....+..+..|++...+...... ...++.|+
T Consensus         4 ~~i~~i~Hv~l~v~Dl~~s~~FY~~vLGl~~v~~~~~~~~~~~~~l~~~~~~g~~g~~l~l~~~~~~~~~~~~~~~~~hi   83 (335)
T 3oaj_A            4 KKTMGIHHITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGNEGGKPGTIITFFPWAGARQGVIGDGQVGVT   83 (335)
T ss_dssp             CCCCSEEEEEEEESCHHHHHHHHTTTTCCEEEEEEECSSCTTSEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEE
T ss_pred             ccCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeecCCCCCceEEEEEecCCCCCCcEEEEEECCCCCCCCCCCCceEEE
Confidence            568999999999999999999999999999987753322 2222234443322223467776643322212 23468999


Q ss_pred             EEEEC--CHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCCC---------------CCCceecee
Q 018138          188 GIAVE--DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT---------------PEPLCQVML  250 (360)
Q Consensus       188 ~f~V~--Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~~---------------~~~i~hv~L  250 (360)
                      +|.|+  |+++++++|+++|+++..  .. ..+ ...+||+|||||.|||++..+.               ..+++||+|
T Consensus        84 af~V~~~dl~~~~~rL~~~Gv~~~~--~~-~~g-~~~~~f~DPdGn~iEl~~~~~~~~~~~~~~~v~~~~~i~gl~Hv~L  159 (335)
T 3oaj_A           84 SYVVPKGAMAFWEKRLEKFNVPYTK--IE-RFG-EQYVEFDDPHGLHLEIVEREEGEANTWTFGEVTPDVAIKGFGGATL  159 (335)
T ss_dssp             EEEECTTCHHHHHHHHHHTTCCCEE--EE-ETT-EEEEEEECTTSCEEEEEECSCSCCCCCCBTTBCTTTSCCEEEEEEE
T ss_pred             EEEecHHHHHHHHHHHHhCcceeee--ec-cCC-cEEEEEECCCCCEEEEEEeCCCCcCCCcCCCCChhhhhccccceEE
Confidence            99999  999999999999998874  22 233 4579999999999999987531               247999999


Q ss_pred             eecCHHHHHHHhhhcceEEeeeccCCCc-cEEEEE-----------EeCCcccccCC-CCeeEEEEEeCC---HHHHHHH
Q 018138          251 RVGDLDRAINFYKKYTIAVMGYGPEDKN-AVLELT-----------YNHGVTEYDKG-NGYAQIAIGTDD---VYKTAEA  314 (360)
Q Consensus       251 ~V~D~e~a~~FY~~~~~~~lG~~~~~~~-~~l~l~-----------~~~~~~~~~~g-~g~~hiaf~V~D---l~~~~~~  314 (360)
                      .|+|++++.+||++    +|||+..... ....+.           ...+......+ .+++|+||.|+|   ++++.++
T Consensus       160 ~v~Dle~t~~FY~~----vLG~~~~~~~~~~~~~~~g~~~~~l~l~~~~~~~~~~~g~g~~~HiAf~v~d~~~l~~~~~~  235 (335)
T 3oaj_A          160 LSEQPDKTADLLEN----IMGLERVGKEGDFVRYRSAGDIGNVIDLKLTPIGRGQMGAGTVHHIAWRANDDEDQLDWQRY  235 (335)
T ss_dssp             ECSSHHHHHHHHHH----TSCCEEEEEETTEEEEECSSSSSCEEEEESSCCCBCBCSBTEEEEEEEEESSHHHHHHHHHH
T ss_pred             EECCHHHHHHHHHH----HhCCEEeeccCCEEEEEeCCCCcEEEEEeCCCCCcCCCCCcceEEEEEEcCCHHHHHHHHHH
Confidence            99999999999999    9999754311 111121           11110001123 358999999988   6679999


Q ss_pred             HHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcC
Q 018138          315 IKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  352 (360)
Q Consensus       315 l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  352 (360)
                      |+++|+++.... ...+  .+.+||+||+|+.|||+..
T Consensus       236 L~~~G~~~~~~~-~r~~--~~siYfrDP~G~~iEl~td  270 (335)
T 3oaj_A          236 IASHGYGVTPVR-DRNY--FNAIYFREHGEILFEIATD  270 (335)
T ss_dssp             HHHTTCCCCCCE-ECSS--SEEEEEECTTSCEEEEEES
T ss_pred             HHHCCCCccccc-cCCc--EEEEEEECCCCcEEEEEeC
Confidence            999999865332 2223  4789999999999999887

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.97  E-value=9.8e-30  Score=239.80  Aligned_cols=230  Identities=23%  Similarity=0.326  Sum_probs=177.1

Q ss_pred             cccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEE
Q 018138          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGI  189 (360)
Q Consensus       110 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f  189 (360)
                      +.+++|.||.|.|+|++++++||+++|||++..+.+    .  .+++..+....+..+.+.+..       ..++.|++|
T Consensus         4 ~~i~~l~~v~l~v~Dl~~a~~FY~~vlG~~~~~~~~----~--~~~l~~~~~~~~~~l~l~~~~-------~~~~~~~~~   70 (310)
T 3b59_A            4 SRVTEIRYVGYGVKDFDAEKAFYADVWGLEPVGEDA----N--NAWFKAQGADEHHVVQLRRAD-------ENRIDVIAL   70 (310)
T ss_dssp             CCEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEECS----S--EEEEECTTSCCSCSEEEEECS-------SCEEEEEEE
T ss_pred             eecceeeEEEEecCCHHHHHHHHHhCcCCEEeeecC----C--eEEEEECCCCCCEEEEEEECC-------CCCeeEEEE
Confidence            467899999999999999999999999999976531    1  356665431023456665532       346889999


Q ss_pred             EE---CCHHHHHHHHHHcCCeEecCCee--cCCCCEEEEEEECCCCCEEEEeecCC------------CCCCceeceeee
Q 018138          190 AV---EDVAKTVDLVKAKGGKVTREPGP--VKGGNTVIAFIEDPDGYKFELLERGP------------TPEPLCQVMLRV  252 (360)
Q Consensus       190 ~V---~Dld~~~~rL~~~G~~~~~~p~~--~~~g~~~~~~~~DPdG~~iEl~~~~~------------~~~~i~hv~L~V  252 (360)
                      .|   +|+++++++|+++|+++..++..  .+++.+ .++|.||+|+.|||++...            .+.+++|+.|.|
T Consensus        71 ~v~~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~-~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~l~hv~l~v  149 (310)
T 3b59_A           71 AADSRSDVDALRASVEAAGCKVASEPAVLATPGGGY-GFRFFSPDGLLFEVSSDVAKGAKRDLARWEGVPVKISHIVLHS  149 (310)
T ss_dssp             EESSHHHHHHHHHHHHHHTCCBCCCSEECCSTTCCE-EEEEECTTSCEEEEEECCCCCCCCCCCTTCCCCCEEEEEEEEE
T ss_pred             EeCCHHHHHHHHHHHHhCCCeEeecCccccccCCce-EEEEECCCCCEEEEEEcccccCCCccCCCCCcCcEeceEEEec
Confidence            99   68999999999999999888765  344444 5889999999999997653            235799999999


Q ss_pred             cCHHHHHHHhhhcceEEeeeccCCC--ccEEEEEEeCCccc--c--cCCCCeeEEEEEeCCHHHH---HHHHHHcCCeEe
Q 018138          253 GDLDRAINFYKKYTIAVMGYGPEDK--NAVLELTYNHGVTE--Y--DKGNGYAQIAIGTDDVYKT---AEAIKLSGGKIT  323 (360)
Q Consensus       253 ~D~e~a~~FY~~~~~~~lG~~~~~~--~~~l~l~~~~~~~~--~--~~g~g~~hiaf~V~Dl~~~---~~~l~~~G~~i~  323 (360)
                      +|++++.+||++    +|||+..+.  .....+..+.....  .  .. .+++|++|.|+|++++   +++|+++|+++.
T Consensus       150 ~D~~~a~~FY~~----~LG~~~~~~~~~~~~fl~~~~~~~~l~l~~~~-~g~~hi~f~v~d~d~~~~~~~~l~~~G~~~~  224 (310)
T 3b59_A          150 PNHQDMVKFFTD----VLGFKVSDWLGDFMCFLRCNSAHHRIAILPGP-PCLNHVAYDMLSVDDMMRGAHRLKVKGIDIG  224 (310)
T ss_dssp             TTHHHHHHHHHH----TSCCEEEEEETTTEEEEESSSBSCSEEEEESS-SEEEEEEEECSSHHHHHHHHHHHHHTTCCCS
T ss_pred             CCHHHHHHHHHh----CCCCEEEEeeCCeEEEEecCCCcceEEEECCC-CceEEEEEEcCCHHHHHHHHHHHHHcCCcee
Confidence            999999999999    999986532  12233332211111  1  12 6789999999997766   999999999999


Q ss_pred             eCCcccCCCCcEEEEEECCCCCeEEEEcCcccccc
Q 018138          324 REPGPLPGINTKITACLDPDGWKSVFVDNLDFLKE  358 (360)
Q Consensus       324 ~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~  358 (360)
                      .+|++++.+.++++|++|||||.||+.+..+.+.|
T Consensus       225 ~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~~~~d~  259 (310)
T 3b59_A          225 WGPGRHTAGNNTFSYFVTPGGFVTEYTSELEEVDF  259 (310)
T ss_dssp             EEEEECSTTCCEEEEEECTTSCEEEEEECCCBCCT
T ss_pred             ecCccccCCCcEEEEEECCCCCEEEEEeCccEecC
Confidence            99988876657899999999999999998766654

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.97  E-value=1.4e-29  Score=237.81  Aligned_cols=228  Identities=19%  Similarity=0.296  Sum_probs=167.5

Q ss_pred             ccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEE
Q 018138          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  190 (360)
Q Consensus       111 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~  190 (360)
                      ++++++||.|.|+|++++++||+++|||++..+..  .+   .+++..+.....+.+.+...       ...+..|++|.
T Consensus         4 ~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~--~~---~~~l~~~~~~~~~~l~~~~~-------~~~~~~~~~f~   71 (307)
T 1mpy_A            4 GVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDD--QG---RVYLKAWTEVDKFSLVLREA-------DEPGMDFMGFK   71 (307)
T ss_dssp             SEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECT--TS---CEEEECTTCCBSCSEEEEEC-------SSCEEEEEEEE
T ss_pred             ccceeeeEEEEeCCHHHHHHHHHHccCCEEEeecC--CC---cEEEEecCCCCceEEEEccC-------CCCCcceEEEE
Confidence            57899999999999999999999999999986532  11   25666544322333433321       12378999999


Q ss_pred             E---CCHHHHHHHHHHcCCeEecCCe-ecCCCCEEEEEEECCCCCEEEEeecCC----------------------CCCC
Q 018138          191 V---EDVAKTVDLVKAKGGKVTREPG-PVKGGNTVIAFIEDPDGYKFELLERGP----------------------TPEP  244 (360)
Q Consensus       191 V---~Dld~~~~rL~~~G~~~~~~p~-~~~~g~~~~~~~~DPdG~~iEl~~~~~----------------------~~~~  244 (360)
                      |   +|+++++++|+++|+++..+|. ...+++ ..++|+||||+.|||++...                      ...+
T Consensus        72 v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (307)
T 1mpy_A           72 VVDEDALRQLERDLMAYGCAVEQLPAGELNSCG-RRVRFQAPSGHHFELYADKEYTGKWGLNDVNPEAWPRDLKGMAAVR  150 (307)
T ss_dssp             ESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBC-CEEEEECTTSCEEEEESCBCBCCSTTCCSBSCCSSCSCCCTTCCCE
T ss_pred             eCCHHHHHHHHHHHHHcCCceecCCcccCCCce-EEEEEECCCCCEEEEEEcchhcccccccccCCcCCcccCCCCCcCc
Confidence            9   7899999999999999877654 223333 35899999999999998421                      1236


Q ss_pred             ceeceeeecCHHHHHHHhhhcceEEeeeccCCC-----ccE--EEEEEeCCc--ccc--cCCCC-eeEEEEEeC---CHH
Q 018138          245 LCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK-----NAV--LELTYNHGV--TEY--DKGNG-YAQIAIGTD---DVY  309 (360)
Q Consensus       245 i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~-----~~~--l~l~~~~~~--~~~--~~g~g-~~hiaf~V~---Dl~  309 (360)
                      ++|+.|.|+|++++.+||++    +|||+....     ...  +.+......  ...  ....+ .+|++|.|+   |++
T Consensus       151 i~hv~l~v~D~~~a~~FY~~----~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~hi~f~v~d~~dv~  226 (307)
T 1mpy_A          151 FDHALMYGDELPATYDLFTK----VLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAFIHHPEKGRLHHVSFHLETWEDLL  226 (307)
T ss_dssp             EEEEEEEESCHHHHHHHHHH----TTCCEEEEEEECTTCCEEEEEEESSSBSCSEEEEECSSSSEEEEEEEECSCHHHHH
T ss_pred             eeeEEEEcCCHHHHHHHHHH----HcCCeeEeeeecCCCcEEEEEEEcCCCceeEEEecCCCCCcceEEEEEcCCHHHHH
Confidence            89999999999999999999    999875321     111  122221111  111  12345 799999998   567


Q ss_pred             HHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCccc
Q 018138          310 KTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDF  355 (360)
Q Consensus       310 ~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  355 (360)
                      +++++|+++|+++..+|.+++.+.++.+||+|||||.|||++....
T Consensus       227 ~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  272 (307)
T 1mpy_A          227 RAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGGDY  272 (307)
T ss_dssp             HHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECCCB
T ss_pred             HHHHHHHHCCCceeeCCccCCCCCceEEEEECCCCcEEEEEecccc
Confidence            7889999999999888877765446889999999999999987543

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.97  E-value=3.2e-29  Score=233.29  Aligned_cols=229  Identities=21%  Similarity=0.216  Sum_probs=167.6

Q ss_pred             ceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCC-CeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEE
Q 018138          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPED-RYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (360)
Q Consensus       113 ~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~-~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V  191 (360)
                      ..+.|+.|.|+|++++++||+++|||++......... .+  ..+..+.   .....+....... .......++++|.|
T Consensus        31 g~~~~v~l~v~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~--~~~~~~g---~~~~~l~~~~~~~-~~~~~~~~~~~~~v  104 (282)
T 3oxh_A           31 GTPNWVDLQTTDQSAAKKFYTSLFGWGYDDNPVPGGGGVY--SMATLNG---EAVAAIAPMPPGA-PEGMPPIWNTYIAV  104 (282)
T ss_dssp             TSEEEEEEEESCHHHHHHHHHHHHCCEEEEEC-----CCE--EEEEETT---EEEEEEEECCSCC----CCCEEEEEEEC
T ss_pred             CCcEEEEEecCCHHHHHHHHHHhcCcEEeecCCCCCccCE--EEEEeCC---eeeEeeccCCCCC-CCCCCCcEEEEEEe
Confidence            4677788999999999999999999999765321110 23  3333332   1223333322111 11223557899999


Q ss_pred             CCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCC--------CCCCceeceeeecCHHHHHHHhh
Q 018138          192 EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP--------TPEPLCQVMLRVGDLDRAINFYK  263 (360)
Q Consensus       192 ~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~--------~~~~i~hv~L~V~D~e~a~~FY~  263 (360)
                      +|+++++++++++|+++..+|...++.+ +.++|+||+||.|+|++...        .+..+.|+.|.|+|++++++||+
T Consensus       105 ~d~d~~~~~l~~~G~~~~~~p~~~~~~g-~~~~~~DP~G~~i~l~~~~~~~~~~~~~~~~~~~~~~l~v~D~~~a~~FY~  183 (282)
T 3oxh_A          105 DDVDAVVDKVVPGGGQVMMPAFDIGDAG-RMSFITDPTGAAVGLWQANRHIGATLVNETGTLIWNELLTDKPDLALAFYE  183 (282)
T ss_dssp             SCHHHHHTTTTTTTCEEEEEEEEETTTE-EEEEEECTTCCEEEEEEESSCCSCSBCSSTTSEEEEEEECSCHHHHHHHHH
T ss_pred             CCHHHHHHHHHHCCCEEEECCEecCCCe-EEEEEECCCCCEEEEEEccccCCccccCCCCccEEEEEEcCCHHHHHHHHH
Confidence            9999999999999999988887766443 47999999999999998764        24679999999999999999999


Q ss_pred             hcceEEeeeccCCCc-----cEEEEEEeC----Cccc--ccCCCCeeEEEEEeCCHHHHHHHHHHcCCeEeeCCcccCCC
Q 018138          264 KYTIAVMGYGPEDKN-----AVLELTYNH----GVTE--YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGI  332 (360)
Q Consensus       264 ~~~~~~lG~~~~~~~-----~~l~l~~~~----~~~~--~~~g~g~~hiaf~V~Dl~~~~~~l~~~G~~i~~~p~~~~~~  332 (360)
                      +    +|||+.....     ....+....    +...  ....++.+|++|.|+|+++++++++++|+++..+|.+.+++
T Consensus       184 ~----vlG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~dvd~~~~~~~~~G~~~~~~p~~~~~~  259 (282)
T 3oxh_A          184 A----VVGLTHSSMEIAAGQNYRVLKAGDAEVGGCMEPPMPGVPNHWHVYFAVDDADATAAKAAAAGGQVIAEPADIPSV  259 (282)
T ss_dssp             H----HHCCEEEEC-------CEEEEETTEEEEEEECCSSTTCCSEEEEEEECSCHHHHHHHHHHTTCEEEEEEEEETTT
T ss_pred             H----HhCCeeeeccCCCCcceEEEEcCCccEeeecCCCCCCCCCeEEEEEEeCCHHHHHHHHHHcCCEEecCCeEcCCC
Confidence            9    9999754211     111121110    0000  11234678999999999999999999999999999888764


Q ss_pred             CcEEEEEECCCCCeEEEEcCc
Q 018138          333 NTKITACLDPDGWKSVFVDNL  353 (360)
Q Consensus       333 ~~~~~~~~DPdG~~iel~~~~  353 (360)
                       +++++|+|||||.|+|++..
T Consensus       260 -~~~~~~~DPdGn~~~l~~~~  279 (282)
T 3oxh_A          260 -GRFAVLSDPQGAIFSVLKAA  279 (282)
T ss_dssp             -EEEEEEECTTSCEEEEEEEC
T ss_pred             -eEEEEEECCCCCEEEEEecC
Confidence             78999999999999999864

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.97  E-value=1.7e-29  Score=239.50  Aligned_cols=227  Identities=20%  Similarity=0.241  Sum_probs=172.0

Q ss_pred             ccccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEE
Q 018138          109 KSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFG  188 (360)
Q Consensus       109 ~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~  188 (360)
                      .+++++|+||.|.|+|++++++||+++|||++..+.+    .  .+++...+...++.+.+.+..       ..++.|++
T Consensus        12 ~~~i~~l~hv~l~v~Dl~~a~~FY~~vlG~~~~~~~~----~--~~~l~~~~~~~~~~l~l~~~~-------~~~~~~~~   78 (323)
T 1f1u_A           12 APDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE----N--TIYLRSLEEFIHHNLVLRQGP-------IAAVAAFA   78 (323)
T ss_dssp             CCCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS----S--EEEEECTTCCSSCSEEEEECS-------SCEEEEEE
T ss_pred             CcccceeeEEEEEeCCHHHHHHHHHhCCCCEEeeecC----C--EEEEEecCCCCcEEEEEEECC-------CCCeeEEE
Confidence            3678999999999999999999999999999976531    1  356664332223456665431       23688999


Q ss_pred             EEE---CCHHHHHHHHHHcCCeEecCCe-ecCCCCEEEEEEECCCCCEEEEeecCC---------------CCCCceece
Q 018138          189 IAV---EDVAKTVDLVKAKGGKVTREPG-PVKGGNTVIAFIEDPDGYKFELLERGP---------------TPEPLCQVM  249 (360)
Q Consensus       189 f~V---~Dld~~~~rL~~~G~~~~~~p~-~~~~g~~~~~~~~DPdG~~iEl~~~~~---------------~~~~i~hv~  249 (360)
                      |.|   +|+++++++|+++|+++...+. ...++++ .++|.||+|+.|||++...               .+.+++|+.
T Consensus        79 f~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~g~-~~~~~DP~G~~iel~~~~~~~~~~~~~~~~~~~~~~~~l~Hv~  157 (323)
T 1f1u_A           79 YRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGD-SVRVEDPLGFPYEFFYETEHVERLTQRYDLYSAGELVRLDHFN  157 (323)
T ss_dssp             EEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCS-EEEEECTTSCEEEEECCBCCCCCCTTCGGGCCTTCCCEEEEEE
T ss_pred             EEeCCHHHHHHHHHHHHhCCCcEEeccccccCCcce-EEEEECCCCCEEEEEEecccccccccccccCCCCCCceeeeEE
Confidence            999   6899999999999999887665 3333333 5899999999999997632               134789999


Q ss_pred             eeecCHHHHHHHhhhcceEEeeeccCCC------ccEEE-EEEeCCccc--c--cCCCCeeEEEEEeCCHHH---HHHHH
Q 018138          250 LRVGDLDRAINFYKKYTIAVMGYGPEDK------NAVLE-LTYNHGVTE--Y--DKGNGYAQIAIGTDDVYK---TAEAI  315 (360)
Q Consensus       250 L~V~D~e~a~~FY~~~~~~~lG~~~~~~------~~~l~-l~~~~~~~~--~--~~g~g~~hiaf~V~Dl~~---~~~~l  315 (360)
                      |.|+|++++.+|| +    +|||+..+.      ..... +..+.....  .  ..+++++|++|.|+|+++   ++++|
T Consensus       158 l~v~D~~~a~~FY-~----~LGf~~~~~~~~~~g~~~~~f~~~~~~~~~~~~~~~~~~~~~Hiaf~v~d~d~v~~~~~~l  232 (323)
T 1f1u_A          158 QVTPDVPRGRAYL-E----DLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGGNGPRMHHVAFATHEKHNIIQICDKM  232 (323)
T ss_dssp             EEESCHHHHHHHH-H----HTTCEEEEEEECTTCCEEEEEEESSSSSCSEEEEESSBSEEEEEEEECSSHHHHHHHHHHH
T ss_pred             EecCCHHHHHHHH-H----hCCCeEEEEEEcCCCcEEEEEEEcCCCcccEEEeCCCCCCceEEEEECCCHHHHHHHHHHH
Confidence            9999999999999 8    999975421      11222 222211111  1  123488999999999988   99999


Q ss_pred             HHcCC--eEeeCCcccCCCCcEEEEEECCCCCeEEEEcCcc
Q 018138          316 KLSGG--KITREPGPLPGINTKITACLDPDGWKSVFVDNLD  354 (360)
Q Consensus       316 ~~~G~--~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  354 (360)
                      +++|+  ++..+|+++..+..+++|++|||||.||++....
T Consensus       233 ~~~G~~~~i~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~~  273 (323)
T 1f1u_A          233 GALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQDY  273 (323)
T ss_dssp             HHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECCC
T ss_pred             HHCCCccccccCCCccCCCCcEEEEEECCCCCEEEEEeCCE
Confidence            99999  9998888887766788999999999999986543

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.97  E-value=2.3e-29  Score=242.41  Aligned_cols=229  Identities=19%  Similarity=0.207  Sum_probs=172.7

Q ss_pred             cccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEE
Q 018138          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGI  189 (360)
Q Consensus       110 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f  189 (360)
                      ..+++|+||.|.|+|++++++||+++|||+++.+.+      ..++|+++....++.+.+.+..       ..++.|++|
T Consensus        13 p~I~rl~hV~l~V~DLe~s~~FY~dvLGL~~~~~~~------~~~~lr~~~~~~~~~l~l~~~~-------~~gl~~~a~   79 (365)
T 4ghg_A           13 PDILRCAYAELVVTDLAKSRNFYVDVLGLHVSYEDE------NQIYLRSFEEFIHHNLVLTKGP-------VAALKAMAF   79 (365)
T ss_dssp             CCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCSSCSEEEEECS-------SCEEEEEEE
T ss_pred             CCCCEEEEEEEEeCCHHHHHHHHhhCCCCEEEEEcC------CEEEEEeCCCCcceEEEeccCC-------CCCcceEEE
Confidence            458999999999999999999999999999987632      2477777655555667666532       247899999


Q ss_pred             EECC---HHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCC---------------CCCCceeceee
Q 018138          190 AVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP---------------TPEPLCQVMLR  251 (360)
Q Consensus       190 ~V~D---ld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~---------------~~~~i~hv~L~  251 (360)
                      .|.+   ++++.++|+++|+++...+.....+....++|+||||+.|||+....               .+.+++||.|.
T Consensus        80 ~v~s~~dLd~~~~~L~~~Gv~v~~~~~~~~~~~g~~~~f~DPdG~~iEl~~~~~~~~~~~~~~~~~~~~~~~rlgHV~L~  159 (365)
T 4ghg_A           80 RVRTPEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVEDPLGFPYEFFFETTHVERLHMRYDLYSAGELVRLDHFNQV  159 (365)
T ss_dssp             EESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCBCCCCCCTTCTTTCCTTCCCEEEEEEEE
T ss_pred             EeCCHHHHHHHHHHHHHcCCcceeccccccCCCceEEEEECCCCCEEEEEEEeeccccccccccccccccCcceeEEEEe
Confidence            9975   88899999999999876554433333346999999999999996432               23579999999


Q ss_pred             ecCHHHHHHHhhhcceEEeeeccCC------Cc-cEEEEEEeCCccc--c--cCCCCeeEEEEEeCCHH---HHHHHHHH
Q 018138          252 VGDLDRAINFYKKYTIAVMGYGPED------KN-AVLELTYNHGVTE--Y--DKGNGYAQIAIGTDDVY---KTAEAIKL  317 (360)
Q Consensus       252 V~D~e~a~~FY~~~~~~~lG~~~~~------~~-~~l~l~~~~~~~~--~--~~g~g~~hiaf~V~Dl~---~~~~~l~~  317 (360)
                      |.|++++.+||+     .||+...+      .. ....+..+.....  .  ..+++++|++|+|+|++   .+.++|++
T Consensus       160 v~D~~~t~~Fy~-----~LGf~~sd~~~~~~g~~~~~f~~~~~~hH~la~~~~~~~~lhHvaf~v~d~d~v~~~~d~l~~  234 (365)
T 4ghg_A          160 TPDVPRGRKYLE-----DLGFRVTEDIQDDEGTTYAAWMHRKGTVHDTALTGGNGPRLHHVAFSTHEKHNIIQICDKMGA  234 (365)
T ss_dssp             ESCHHHHHHHHH-----HTTCEEEEEEECTTSCEEEEEEESSSSSCSEEEEESSBSEEEEEEEECSSHHHHHHHHHHHHH
T ss_pred             ecCHHHHHHHHH-----hcCCEEEEEEecCCCceeEEeeecCCcccceeeecCCCCceeEEEEecCCHHHHHHHHHHHHh
Confidence            999999999997     45664321      11 1222333222111  1  22357999999998866   56778889


Q ss_pred             cCCe--EeeCCcccCCCCcEEEEEECCCCCeEEEEcCcccc
Q 018138          318 SGGK--ITREPGPLPGINTKITACLDPDGWKSVFVDNLDFL  356 (360)
Q Consensus       318 ~G~~--i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~  356 (360)
                      +|+.  +.++|++|..++..++||+||+|++||+....+..
T Consensus       235 ~g~~~~i~~GpgRH~~~~~~f~Y~~dP~G~~iE~~t~g~~i  275 (365)
T 4ghg_A          235 LRISDRIERGPGRHGVSNAFYLYILDPDNHRIEIYTQDYYT  275 (365)
T ss_dssp             TTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECCCCC
T ss_pred             CCCCceeEeCCCccCCCCcEEEEEECCCCceEEEEcCCcCc
Confidence            9985  67899999988789999999999999998876554

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.97  E-value=3.1e-29  Score=235.43  Aligned_cols=229  Identities=14%  Similarity=0.182  Sum_probs=170.3

Q ss_pred             ccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEE
Q 018138          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  190 (360)
Q Consensus       111 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~  190 (360)
                      .+++|+||.|.|+|++++++||+++|||++....  .+ .  .+++..+..  +..|.+.+..       ..++.|++|.
T Consensus         3 ~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~--~~-~--~~~~~~~~~--~~~l~l~~~~-------~~~~~~~~f~   68 (305)
T 2wl9_A            3 KVTELGYLGLSVSNLDAWRDYAAGIMGMQVVDDG--ED-D--RIYLRMDRW--HHRIVLHADG-------SDDLAYIGWR   68 (305)
T ss_dssp             CCCEEEEEEEECSCHHHHHHHHTTTTCCEEECCS--CT-T--EEEEECSSB--SCSEEEECSS-------CCEEEEEEEE
T ss_pred             ccceeeEEEEEeCCHHHHHHHHHhccCCEEeecc--CC-C--eEEEEeCCC--eEEEEEEECC-------CCCeEEEEEE
Confidence            4789999999999999999999999999997521  11 2  356665542  2346665421       3468899999


Q ss_pred             EC---CHHHHHHHHHHcCCeEecCCeec--CCCCEEEEEEECCCCCEEEEeec-CC------------------CCCCce
Q 018138          191 VE---DVAKTVDLVKAKGGKVTREPGPV--KGGNTVIAFIEDPDGYKFELLER-GP------------------TPEPLC  246 (360)
Q Consensus       191 V~---Dld~~~~rL~~~G~~~~~~p~~~--~~g~~~~~~~~DPdG~~iEl~~~-~~------------------~~~~i~  246 (360)
                      |+   |+++++++|+++|+++..+|...  ..+....+||+|||||.|||++. ..                  ...+++
T Consensus        69 v~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  148 (305)
T 2wl9_A           69 VAGPVELDELAEQLKNAGIPFEVASDADAAERRVLGLVKLHDPGGNPTEIFYGPQVDTSSPFHPGRPMFGKFVTEGQGLG  148 (305)
T ss_dssp             CSSHHHHHHHHHHHHHTTCCCEECCHHHHHHTTEEEEEEEECTTCCEEEEEEEECBCTTSCCCCSSCCSSCBCCTTTCSC
T ss_pred             ECCHHHHHHHHHHHHHCCCceEeCCcccccccCcEEEEEEECCCCCEEEEEECCCccCCCCcCCCCCcccceecCCceee
Confidence            97   69999999999999988776543  23434578999999999999976 21                  123799


Q ss_pred             eceeeecCHHHHHHHhhhcceEEeeeccCCC----------ccEEEEEEeCCcc--cc---cCCCCeeEEEEEeCC---H
Q 018138          247 QVMLRVGDLDRAINFYKKYTIAVMGYGPEDK----------NAVLELTYNHGVT--EY---DKGNGYAQIAIGTDD---V  308 (360)
Q Consensus       247 hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~----------~~~l~l~~~~~~~--~~---~~g~g~~hiaf~V~D---l  308 (360)
                      |+.|.|+|++++.+|| +    +|||+..+.          .....+.......  ..   +...+.+|++|.|+|   +
T Consensus       149 hv~l~v~D~~~s~~FY-~----vLG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~hiaf~v~d~~~v  223 (305)
T 2wl9_A          149 HIIIREDDVEEATRFY-R----LLGLEGAVEYKFALPNGAVGTPVFMHCNDRHHSLAFGVGPMDKRINHLMIEYTHLDDL  223 (305)
T ss_dssp             EEEECCSCHHHHHHHH-H----HHTCEEEECBCEECTTSCEECCEEEESSSSSCSEEECCSCCSSSEEEEEEEESSHHHH
T ss_pred             eEEEECCCHHHHHHHH-H----HcCCeeeeeEecccCCCccceEEEEEcCCCceEEEEecCCCCCCceEEEEEcCCHHHH
Confidence            9999999999999999 9    999976321          0111222111111  11   123578999999988   6


Q ss_pred             HHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCcccccc
Q 018138          309 YKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFLKE  358 (360)
Q Consensus       309 ~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~  358 (360)
                      ++++++|+++|+++..+|++++.+..+++||+|||||.|||+.....+.|
T Consensus       224 ~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~~~~d~  273 (305)
T 2wl9_A          224 GYAHDLVRQQKIDVTLQIGKHSNDEALTFYCANPSGWLWEPGWGSRPAPA  273 (305)
T ss_dssp             HHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEECCCCCCS
T ss_pred             HHHHHHHHHcCCCccccCcccCCCCcEEEEEECCCCCEEEEEeCCEEeCC
Confidence            67889999999999988887776556789999999999999987644443

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.97  E-value=8.1e-29  Score=231.42  Aligned_cols=222  Identities=18%  Similarity=0.199  Sum_probs=166.7

Q ss_pred             cceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEE
Q 018138          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (360)
Q Consensus       112 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V  191 (360)
                      +++|+||.|.|+|++++++||+++|||++..+..   .   .+++..+..  .+.+.+.+.       ...++.|++|.|
T Consensus         2 i~~i~hv~l~v~Dl~~s~~FY~~~LG~~~~~~~~---~---~~~~~~~~~--~~~l~~~~~-------~~~~~~~~~f~v   66 (297)
T 1lgt_A            2 IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD---N---GDLFRIDSR--AWRIAVQQG-------EVDDLAFAGYEV   66 (297)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET---T---EEEEESSSB--SCSEEEEEC-------TTCEEEEEEEEE
T ss_pred             ceEEEEEEEEcCCHHHHHHHHHHccCCEEeecCC---C---eEEEEeCCC--cEEEEEecC-------CCCCccEEEEEe
Confidence            6789999999999999999999999999986532   1   256665432  233444332       124688999999


Q ss_pred             C---CHHHHHHHHHHcCCeEecCCeec---CCCCEEEEEEECCCCCEEEEeecCCC------------------CCCcee
Q 018138          192 E---DVAKTVDLVKAKGGKVTREPGPV---KGGNTVIAFIEDPDGYKFELLERGPT------------------PEPLCQ  247 (360)
Q Consensus       192 ~---Dld~~~~rL~~~G~~~~~~p~~~---~~g~~~~~~~~DPdG~~iEl~~~~~~------------------~~~i~h  247 (360)
                      +   |+++++++|+++|+++...|...   .++. ..+||.|||||.|||++....                  +.++.|
T Consensus        67 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h  145 (297)
T 1lgt_A           67 ADAAGLAQMADKLKQAGIAVTTGDASLARRRGVT-GLITFADPFGLPLEIYYGASEVFEKPFLPGAAVSGFLTGEQGLGH  145 (297)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTCS-EEEEEECTTSCEEEEEECCCBCTTSCCCCSSSCSCBCCGGGCSCE
T ss_pred             CCHHHHHHHHHHHHHCCCeEEeCCccccccCCce-eEEEEECCCCCEEEEEECccccccCCccCCCcccccccCccccce
Confidence            8   89999999999999987765432   2333 469999999999999986521                  247999


Q ss_pred             ceeeecCHHHHHHHhhhcceEEeeeccCCCc----------cEEEEEEeCCcc--cc---cCCCCeeEEEEEeCCHHHHH
Q 018138          248 VMLRVGDLDRAINFYKKYTIAVMGYGPEDKN----------AVLELTYNHGVT--EY---DKGNGYAQIAIGTDDVYKTA  312 (360)
Q Consensus       248 v~L~V~D~e~a~~FY~~~~~~~lG~~~~~~~----------~~l~l~~~~~~~--~~---~~g~g~~hiaf~V~Dl~~~~  312 (360)
                      +.|.|+|++++.+||++    +|||+.....          ....+.......  ..   +...+.+|++|.|+|++++.
T Consensus       146 v~l~v~D~~~a~~FY~~----~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~hiaf~v~d~~~~~  221 (297)
T 1lgt_A          146 FVRCVPDSDKALAFYTD----VLGFQLSDVIDMKMGPDVTVPAYFLHCNERHHTLAIAAFPLPKRIHHFMLEVASLDDVG  221 (297)
T ss_dssp             EEEECSCHHHHHHHHHH----TTCCEEEEEEEEEEETTEEEEEEEEESSSBSCSEEEECCCCSSSEEEEEEEBSCHHHHH
T ss_pred             EEEecCCHHHHHHHHHH----hcCCeeeeEEeccCCCCccceEEEEEeCCCcceEEEEcCCCCCCceEEEEeCCCHHHHH
Confidence            99999999999999999    9999764210          111111111111  11   12357899999999987766


Q ss_pred             ---HHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCcc
Q 018138          313 ---EAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  354 (360)
Q Consensus       313 ---~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  354 (360)
                         ++ +++|+++..+|.+++.+..+++||+|||||.|||+....
T Consensus       222 ~~~~~-~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~  265 (297)
T 1lgt_A          222 FAFDR-VDADGLITSTLGRHTNDHMVSFYASTPSGVEVEYGWSAR  265 (297)
T ss_dssp             HHHHH-HHTTTCEEEEEEEESSSCCEEEEEECTTSCEEEEEECCC
T ss_pred             HHHHH-HhCCCcccccCcccCCCCcEEEEEECCCCcEEEEecCCE
Confidence               88 999999999888887655677999999999999998764

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.97  E-value=9.6e-29  Score=231.28  Aligned_cols=225  Identities=13%  Similarity=0.133  Sum_probs=167.1

Q ss_pred             cccceeEEEEEEeCCHHHHHHHHHHhcCCEEEE-EeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEE
Q 018138          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLR-KRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFG  188 (360)
Q Consensus       110 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~-~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~  188 (360)
                      |++++|+||.|.|+|++++++||+++|||++.. +.   +.   .+++..+...  +.+.+.+..       ..++.|++
T Consensus         1 M~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~---~~---~~~~~~~~~~--~~l~l~~~~-------~~~~~~~~   65 (300)
T 2zyq_A            1 MSIRSLGYLRIEATDMAAWREYGLKVLGMVEGKGAP---EG---ALYLRMDDFP--ARLVVVPGE-------HDRLLEAG   65 (300)
T ss_dssp             -CCCEEEEEEEEESCHHHHHHHHHHTSCCEECSSCC---SS---CEEEESSSSS--CSEEEEECS-------SCEEEEEE
T ss_pred             CCcceEEEEEEEeCCHHHHHHHHHHccCCEEeccCC---CC---eEEEEeCCCc--EEEEEecCC-------CCCcceEE
Confidence            457899999999999999999999999999975 32   11   2556654332  345554421       24688999


Q ss_pred             EEECC---HHHHHHHHHHcCCeEecCCeec---CCCCEEEEEEECCCCCEEEEeec-CC---------------CCCCce
Q 018138          189 IAVED---VAKTVDLVKAKGGKVTREPGPV---KGGNTVIAFIEDPDGYKFELLER-GP---------------TPEPLC  246 (360)
Q Consensus       189 f~V~D---ld~~~~rL~~~G~~~~~~p~~~---~~g~~~~~~~~DPdG~~iEl~~~-~~---------------~~~~i~  246 (360)
                      |.|+|   +++++++|+++|+++..++...   .++. ..+||+|||||.|||++. ..               .+.+++
T Consensus        66 ~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~l~  144 (300)
T 2zyq_A           66 WECANAEGLQEIRNRLDLEGTPYKEATAAELADRRVD-EMIRFADPSGNCLEVFHGTALEHRRVVSPYGHRFVTGEQGMG  144 (300)
T ss_dssp             EECSSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCS-EEEEEECTTCCEEEEEECCCCCCSCCCCTTCCCBCCGGGCSC
T ss_pred             EEeCCHHHHHHHHHHHHHcCCeEEeCChhhcccccce-EEEEEECCCCCEEEEEEcCCcCCCCCccCCCcccccCCCccC
Confidence            99975   8999999999999987766542   2333 368999999999999987 21               124789


Q ss_pred             eceeeecCHHHHHHHhhhcceEEeeeccCCC-------------c--cEE-EEEEeCCcc--cc---cCCCCeeEEEEEe
Q 018138          247 QVMLRVGDLDRAINFYKKYTIAVMGYGPEDK-------------N--AVL-ELTYNHGVT--EY---DKGNGYAQIAIGT  305 (360)
Q Consensus       247 hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~-------------~--~~l-~l~~~~~~~--~~---~~g~g~~hiaf~V  305 (360)
                      |+.|.|+|++++++||++    +|||+....             .  ... .+.......  ..   +...+.+|++|.|
T Consensus       145 hv~l~v~D~~~a~~FY~~----~LG~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~h~af~v  220 (300)
T 2zyq_A          145 HVVLSTRDDAEALHFYRD----VLGFRLRDSMRLPPQMVGRPADGPPAWLRFFGCNPRHHSLAFLPMPTSSGIVHLMVEV  220 (300)
T ss_dssp             EEEEECSCHHHHHHHHHT----TTCCEEEEEEEECGGGGTCCTTSCCEEEEEEESSSBSCSEEEESSCCSSSEEEEEEEB
T ss_pred             eEEEEeCCHHHHHHHHHH----hcCCEEeeeecccccccccCCCCCceEEEEEEECCCccEEEEecCCCCCCceEEEEEe
Confidence            999999999999999999    999975321             0  111 122111111  11   1235789999999


Q ss_pred             CCHHH---HHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCcc
Q 018138          306 DDVYK---TAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  354 (360)
Q Consensus       306 ~Dl~~---~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  354 (360)
                      +|+++   ++++|+++|+++..+|.+++.+.++++||+|||||.|||+....
T Consensus       221 ~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~~~  272 (300)
T 2zyq_A          221 EQADDVGLCLDRALRRKVPMSATLGRHVNDLMLSFYMKTPGGFDIEFGCEGR  272 (300)
T ss_dssp             SSHHHHHHHHHHHHHTTCCEEEEEEEESSSCCEEEEEECTTSSEEEEEECCC
T ss_pred             CCHHHHHHHHHHHHHCCCceeecccccCCCCeEEEEEECCCCCEEEEEeCCe
Confidence            98654   69999999999998887777655789999999999999998654

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.96  E-value=2.6e-28  Score=232.65  Aligned_cols=233  Identities=14%  Similarity=0.113  Sum_probs=165.2

Q ss_pred             ccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCC-CCeEEEEEeeCCCCceEEEEEEecCCCCC-CcCCCcceEEE
Q 018138          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE-DRYTNAFLGYGPEDSHFVVELTYNYGVDK-YDIGTGFGHFG  188 (360)
Q Consensus       111 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~-~~~~~~~l~~g~~~~~~~lel~~~~~~~~-~~~g~g~~hi~  188 (360)
                      ++++|+||.|.|+|++++++||+++|||++..+....+ ......++..+.......|.+.+...... .....++.|++
T Consensus        27 ~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~l~~~~~~~~~~~~~~~~~hia  106 (338)
T 1zsw_A           27 EIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRTYRGTNAITRIG  106 (338)
T ss_dssp             CCCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEEE
T ss_pred             cCccccEEEEEcCCHHHHHHHHHHhcCCEEEEeecccCCCceEEEEEcCCCCCCCCEEEEEECCCCccCcCCCCCeeeEE
Confidence            47899999999999999999999999999986542111 11112233322212234566655332211 11234688999


Q ss_pred             EEEC---CHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCCC------------------CCCcee
Q 018138          189 IAVE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT------------------PEPLCQ  247 (360)
Q Consensus       189 f~V~---Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~~------------------~~~i~h  247 (360)
                      |.|+   |+++++++|+++|+++..++.  .+|. +.+||+|||||.|||++....                  ..++.|
T Consensus       107 f~v~~~~dld~~~~~l~~~G~~~~~~~~--~~G~-~~~~f~DPdG~~iel~~~~~~~~~~~~p~~~~~~~~~~~~~~l~h  183 (338)
T 1zsw_A          107 LLVPSEDSLHYWKERFEKFDVKHSEMTT--YANR-PALQFEDAEGLRLVLLVSNGEKVEHWETWEKSEVPAKHQIQGMGS  183 (338)
T ss_dssp             EEESCHHHHHHHHHHHHHTTCEECCSEE--ETTE-EEEEEECTTCCEEEEEECTTCCCTTCCCCTTCSSCGGGSCCEEEE
T ss_pred             EEcCCHHHHHHHHHHHHHCCCccccccc--cCCc-EEEEEECCCCCEEEEEEcCCccccccCcCcCCCCCccccCceEEE
Confidence            9998   699999999999999886554  2454 579999999999999987531                  236889


Q ss_pred             ceeeecCHHHHHHHhhhcceEEeeeccCCCc-cEEEEEEe-CCc----cc-------ccCC-CCeeEEEEEeC---CHHH
Q 018138          248 VMLRVGDLDRAINFYKKYTIAVMGYGPEDKN-AVLELTYN-HGV----TE-------YDKG-NGYAQIAIGTD---DVYK  310 (360)
Q Consensus       248 v~L~V~D~e~a~~FY~~~~~~~lG~~~~~~~-~~l~l~~~-~~~----~~-------~~~g-~g~~hiaf~V~---Dl~~  310 (360)
                      +.|.|+|++++.+||++    +|||+..... ....+... .+.    ..       ...+ .+++|++|.|+   |+++
T Consensus       184 v~l~v~Dl~~a~~FY~~----~LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~hiaf~v~~~~dv~~  259 (338)
T 1zsw_A          184 VELTVRRLDKMASTLTE----IFGYTEVSRNDQEAIFQSIKGEAFGEIVVKYLDGPTEKPGRGSIHHLAIRVKNDAELAY  259 (338)
T ss_dssp             EEEEESCHHHHHHHHHH----TTCCEEEEECSSEEEEESSTTCSTTCEEEEECCSSBCBCCBTCEEEEEEEESSHHHHHH
T ss_pred             EEEEECCHHHHHHHHHH----hcCCEEEeecCCeEEEEecCCCCceEEEEeccCCCCCCCCCCceEEEEEEeCCHHHHHH
Confidence            99999999999999999    8998753211 11111110 010    00       0122 35799999998   7999


Q ss_pred             HHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCc
Q 018138          311 TAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  353 (360)
Q Consensus       311 ~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  353 (360)
                      ++++|+++|+++. +|....+  .+.+||+|||||.|||++..
T Consensus       260 ~~~~l~~~G~~~~-~~~~~~~--~~~~~~~DPdG~~iEl~~~~  299 (338)
T 1zsw_A          260 WEEQVKQRGFHSS-GIIDRFY--FKSLYFRESNGILFEIATDG  299 (338)
T ss_dssp             HHHHHHHTTCCCC-CCEECSS--EEEEEEECTTCCEEEEEEEE
T ss_pred             HHHHHHHCCCcee-eeeecCc--eEEEEEECCCCCEEEEEEcC
Confidence            9999999999985 5655433  68899999999999999753

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.96  E-value=2.5e-28  Score=229.01  Aligned_cols=228  Identities=16%  Similarity=0.119  Sum_probs=167.5

Q ss_pred             cccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEE
Q 018138          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGI  189 (360)
Q Consensus       110 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f  189 (360)
                      |.+++|+||.|.|+|++++++||+++|||++..+..  . .  ..++..+..  ++.+.+....       ..++.|++|
T Consensus         5 m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~-~--~~~~~~~~~--~~~l~l~~~~-------~~~~~~~~~   70 (302)
T 2ehz_A            5 AAVIELGYMGISVKDPDAWKSFATDMLGLQVLDEGE--K-D--RFYLRMDYW--HHRIVVHHNG-------QDDLEYLGW   70 (302)
T ss_dssp             CCEEEEEEEEEECSCHHHHHHHHHHTTCCEEECCSC--S-S--EEEEESSSB--SCSEEEESSC-------CSEEEEEEE
T ss_pred             ccccEeeEEEEEeCCHHHHHHHHHhcCCCEEEeccC--C-c--ceEEEeCCC--ceEEEEecCC-------CCCeeEEEE
Confidence            567899999999999999999999999999975421  1 1  356655422  2335554321       236789999


Q ss_pred             EEC---CHHHHHHHHHHcCCeEecCCeecC--CCCEEEEEEECCCCCEEEEeecCC----C---------------CCCc
Q 018138          190 AVE---DVAKTVDLVKAKGGKVTREPGPVK--GGNTVIAFIEDPDGYKFELLERGP----T---------------PEPL  245 (360)
Q Consensus       190 ~V~---Dld~~~~rL~~~G~~~~~~p~~~~--~g~~~~~~~~DPdG~~iEl~~~~~----~---------------~~~i  245 (360)
                      .|+   |+++++++|+++|+++..+|...+  .+....+||+|||||.|||++..+    .               +.++
T Consensus        71 ~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (302)
T 2ehz_A           71 RVAGKPEFEALGQKLIDAGYKIRICDKVEAQERMVLGLMKTEDPGGNPTEIFWGPRIDMSNPFHPGRPLHGKFVTGDQGL  150 (302)
T ss_dssp             EESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTEEEEEEEECTTSCEEEEEEEECBCTTSCCCCSSCCSSCBCCGGGCS
T ss_pred             EECCHHHHHHHHHHHHHCCCcEEECCccccccccceEEEEEECCCCCEEEEEECCCccCCCCccCCCCcccceecCCCcc
Confidence            995   699999999999999887765432  133457899999999999997521    0               1278


Q ss_pred             eeceeeecCHHHHHHHhhhcceEEeeeccCCCc---------cEE-EEEEeCCcc--cc---cCCCCeeEEEEEeCCHH-
Q 018138          246 CQVMLRVGDLDRAINFYKKYTIAVMGYGPEDKN---------AVL-ELTYNHGVT--EY---DKGNGYAQIAIGTDDVY-  309 (360)
Q Consensus       246 ~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~~---------~~l-~l~~~~~~~--~~---~~g~g~~hiaf~V~Dl~-  309 (360)
                      +|+.|.|+|++++.+|| +    +|||+.....         ... .+.......  ..   +...+.+|++|.|+|++ 
T Consensus       151 ~hv~l~v~D~~~a~~FY-~----~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~hiaf~v~d~~~  225 (302)
T 2ehz_A          151 GHCIVRQTDVAEAHKFY-S----LLGFRGDVEYRIPLPNGMTAELSFMHCNARDHSIAFGAMPAAKRLNHLMLEYTHMED  225 (302)
T ss_dssp             CEEEECCSCHHHHHHHH-H----HTTCBCCEEEEEECTTSCEEEEEEEBSSSBSCSEEECSCCCSSSEEEEEEEESSHHH
T ss_pred             ceEEEEcCCHHHHHHHH-H----hcCCeeeeEEeccCCCCcceEEEEEEeCCCCcEEEEecCCCCCceeEEEEEcCCHHH
Confidence            99999999999999999 9    9999865210         111 111111111  11   11247899999998876 


Q ss_pred             --HHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCcccc
Q 018138          310 --KTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFL  356 (360)
Q Consensus       310 --~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~  356 (360)
                        +++++|+++|+++..+|.+++.+..+++||+|||||.|||+.....+
T Consensus       226 v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~~~~~  274 (302)
T 2ehz_A          226 LGYTHQQFVKNEIDIALQLGIHANDKALTFYGATPSGWLIEPGWRGATA  274 (302)
T ss_dssp             HHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEECCCBC
T ss_pred             HHHHHHHHHHCCCcEEeCCcccCCCCceEEEEECCCCcEEEEEECceEc
Confidence              46789999999999888877765568899999999999999876544

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.96  E-value=2e-28  Score=228.16  Aligned_cols=222  Identities=16%  Similarity=0.164  Sum_probs=165.2

Q ss_pred             cceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEE
Q 018138          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (360)
Q Consensus       112 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V  191 (360)
                      +++|+||.|.|+|++++++||+++|||++..+..   .   .+++..+...  +.+.+...       ...++.|++|.|
T Consensus         2 i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~---~---~~~l~~~~~~--~~l~~~~~-------~~~~~~~~~f~v   66 (292)
T 1kw3_B            2 IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG---D---AALYRADQRA--WRIAVQPG-------ELDDLAYAGLEV   66 (292)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET---T---EEEEESSSBS--CSEEEEEC-------TTCEEEEEEEEC
T ss_pred             ceeEEEEEEEeCCHHHHHHHHHhcCCCEEeecCC---C---eEEEEcCCce--EEEEEccC-------CCCCccEEEEEE
Confidence            6799999999999999999999999999986532   1   2556654332  23434332       123678999999


Q ss_pred             C---CHHHHHHHHHHcCCeEecCCee---cCCCCEEEEEEECCCCCEEEEeecCCC------------------CCCcee
Q 018138          192 E---DVAKTVDLVKAKGGKVTREPGP---VKGGNTVIAFIEDPDGYKFELLERGPT------------------PEPLCQ  247 (360)
Q Consensus       192 ~---Dld~~~~rL~~~G~~~~~~p~~---~~~g~~~~~~~~DPdG~~iEl~~~~~~------------------~~~i~h  247 (360)
                      +   |+++++++|+++|+++..+|..   ..++. ..++|+|||||.|||++....                  ..+++|
T Consensus        67 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h  145 (292)
T 1kw3_B           67 DDAAALERMADKLRQAGVAFTRGDEALMQQRKVM-GLLCLQDPFGLPLEIYYGPAEIFHEPFLPSAPVSGFVTGDQGIGH  145 (292)
T ss_dssp             SSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCS-EEEEEECTTSCEEEEEECCCBCTTSCCCCSSSCCCBCCGGGCSCE
T ss_pred             CCHHHHHHHHHHHHHcCCeEeecCcccccccCce-EEEEEECCCCCEEEEEECccccccCCCCCCCCccccccCCcccce
Confidence            8   8999999999999998877653   12333 468999999999999976421                  136899


Q ss_pred             ceeeecCHHHHHHHhhhcceEEeeeccCCCc---------cE-EEEEEeCCcc--cc---cCCCCeeEEEEEeCCHH---
Q 018138          248 VMLRVGDLDRAINFYKKYTIAVMGYGPEDKN---------AV-LELTYNHGVT--EY---DKGNGYAQIAIGTDDVY---  309 (360)
Q Consensus       248 v~L~V~D~e~a~~FY~~~~~~~lG~~~~~~~---------~~-l~l~~~~~~~--~~---~~g~g~~hiaf~V~Dl~---  309 (360)
                      +.|.|+|++++.+||++    +|||+.....         .. ..+.......  ..   +...+.+|++|.|+|++   
T Consensus       146 v~l~v~D~~~a~~FY~~----~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~hiaf~v~d~~~v~  221 (292)
T 1kw3_B          146 FVRCVPDTAKAMAFYTE----VLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHTIALAAFPIPKRIHHFMLQANTIDDVG  221 (292)
T ss_dssp             EEEECSCHHHHHHHHHH----TTCCEEEEEEEEEEETTEEEEEEEEESSSBSCSEEEECCSCSSSEEEEEEEBSSHHHHH
T ss_pred             EEEecCCHHHHHHHHHh----ccCCEEeeeeecccCCCccceEEEEEECCCcceEEEecCCCCCceEEEEEEcCCHHHHH
Confidence            99999999999999999    9999754210         01 1122111111  11   12357899999999865   


Q ss_pred             HHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCC-eEEEEcCcc
Q 018138          310 KTAEAIKLSGGKITREPGPLPGINTKITACLDPDGW-KSVFVDNLD  354 (360)
Q Consensus       310 ~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~-~iel~~~~~  354 (360)
                      +++++|+ +|+++..+|++++.+..+++||+||||| .|||+....
T Consensus       222 ~~~~~l~-~G~~~~~~p~~~~~~~~~~~y~~DPdG~~~iEl~~~~~  266 (292)
T 1kw3_B          222 YAFDRLD-AAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGWGPR  266 (292)
T ss_dssp             HHHHHHH-HTTCBCBCSEEESSSCCEEEEEECSSTTCEEEEEECCC
T ss_pred             HHHHHHh-CCCceeecCcccCCCCeEEEEEECCCCCeeEEEEECCE
Confidence            4778999 9999999988887655678999999999 999998754

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.94  E-value=4.8e-25  Score=211.65  Aligned_cols=233  Identities=18%  Similarity=0.235  Sum_probs=167.8

Q ss_pred             cccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCC------CcCCCc
Q 018138          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK------YDIGTG  183 (360)
Q Consensus       110 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~------~~~g~g  183 (360)
                      |.+++++||.+.|+|++++.+||+++|||+++.+.....+  ..+.+..+    ...+.+..+..+..      ...+.+
T Consensus         1 ~~i~~l~hv~~~v~D~~~a~~fy~~~LGf~~~~~~~~~~g--~~~~~~~g----~~~l~l~~~~~~~~~~~~~~~~~g~g   74 (357)
T 2r5v_A            1 MQNFEIDYVEMYVENLEVAAFSWVDKYAFAVAGTSRSADH--RSIALRQG----QVTLVLTEPTSDRHPAAAYLQTHGDG   74 (357)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTE--EEEEEEET----TEEEEEEEESSTTSHHHHHHHHHSSE
T ss_pred             CCCceEEEEEEEECCHHHHHHHHHHcCCCeEEEEEcCCCc--eEEEEEeC----CEEEEEeCCCCCCCHHHHHHHhcCCe
Confidence            3578999999999999999999999999999876543222  23444443    24566665322111      123568


Q ss_pred             ceEEEEEECCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCC-----------------------
Q 018138          184 FGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP-----------------------  240 (360)
Q Consensus       184 ~~hi~f~V~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~-----------------------  240 (360)
                      +.|++|+|+|+++++++++++|+++..+|....+|....+.++||+|..++|+++..                       
T Consensus        75 ~~~iaf~V~D~~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~~p~g~~~~lv~~~~~~~~f~p~~~~~~~~~~~~~~~~  154 (357)
T 2r5v_A           75 VADIAMATSDVAAAYEAAVRAGAEAVRAPGQHSEAAVTTATIGGFGDVVHTLIQRDGTSAELPPGFTGSMDVTNHGKGDV  154 (357)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEEEECCC-CCCCEEEEECSTTCEEEEEECCSSSCCCCTTCEECSCCCCTTCTTC
T ss_pred             EEEEEEEECCHHHHHHHHHHcCCeEeECcEecCCCeEEEEEEeccCCeEEEEEecccCCCCCCCCCcccCcccccCCCCC
Confidence            999999999999999999999999987776433454446889999999999997521                       


Q ss_pred             CCCCceeceeeec--CHHHHHHHhhhcceEEeeeccCCC------c--------------cEEEEEEeCC---cc---cc
Q 018138          241 TPEPLCQVMLRVG--DLDRAINFYKKYTIAVMGYGPEDK------N--------------AVLELTYNHG---VT---EY  292 (360)
Q Consensus       241 ~~~~i~hv~L~V~--D~e~a~~FY~~~~~~~lG~~~~~~------~--------------~~l~l~~~~~---~~---~~  292 (360)
                      ...+++|+.|.|+  |++++.+||++    +|||+....      .              ..+.+.....   ..   .+
T Consensus       155 ~~~~l~Hv~l~V~~~D~~~~~~FY~~----vLGf~~~~~~~~~~~~~~~~~~~l~~~~g~~~l~l~~~~~~~~~~~~~~~  230 (357)
T 2r5v_A          155 DLLGIDHFAICLNAGDLGPTVEYYER----ALGFRQIFDEHIVVGAQAMNSTVVQSASGAVTLTLIEPDRNADPGQIDEF  230 (357)
T ss_dssp             CCCEEEEEEEECCTTCHHHHHHHHHH----HHCCEEEEEEEEEETTEEEEEEEEECTTSCCEEEEEEECTTSBCCHHHHH
T ss_pred             CcceEeEEEEEEchhhHHHHHHHHHH----hcCCcEEEEEeeccCCcceEEEEEECCCCCEEEEEeeecCCCCCchhHHH
Confidence            0135899999999  99999999999    888864310      0              1122211110   00   00


Q ss_pred             ---cCCCCeeEEEEEeCCHHHHHHHHHHcCCeEeeCCccc--------CCC--------CcEEEEEECCCCCeEEEEcC
Q 018138          293 ---DKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPL--------PGI--------NTKITACLDPDGWKSVFVDN  352 (360)
Q Consensus       293 ---~~g~g~~hiaf~V~Dl~~~~~~l~~~G~~i~~~p~~~--------~~~--------~~~~~~~~DPdG~~iel~~~  352 (360)
                         ..+.+++|+||.|+|+++++++|+++|+++...|...        +..        ..+++|++||||++++|++.
T Consensus       231 ~~~~~~~g~~Hiaf~v~Di~~~~~~L~~~Gv~~~~~p~~yy~~~~~r~~~~~~~~~~~~~~~~l~~~Dp~G~llqi~t~  309 (357)
T 2r5v_A          231 LKDHQGAGVQHIAFNSNDAVRAVKALSERGVEFLKTPGAYYDLLGERITLQTHSLDDLRATNVLADEDHGGQLFQIFTA  309 (357)
T ss_dssp             HHHHTSSEEEEEEEECSCHHHHHHHHHHTTCCBCCCCHHHHHTTTTTCCCSSSCHHHHHHHTCEEEEETTEEEEEEEBC
T ss_pred             HHhcCCCCccEEEEEcCCHHHHHHHHHHcCCCcCCCchhHHHHHHHhhccchhhHHHHHHcCeEEecCCCceEEEEEcc
Confidence               1356899999999999999999999999988876321        000        01479999999999999984

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.92  E-value=1.9e-23  Score=202.45  Aligned_cols=236  Identities=22%  Similarity=0.319  Sum_probs=171.6

Q ss_pred             cccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCC--CCCeEEEEEeeCCCCceEEEEEEecCCCCCC---------
Q 018138          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIP--EDRYTNAFLGYGPEDSHFVVELTYNYGVDKY---------  178 (360)
Q Consensus       110 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~--~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~---------  178 (360)
                      +.+++++||.|.|+|++++.+||+++|||+++.+...+  ......+.++.+    ...+++..+..+...         
T Consensus        18 ~~i~~i~hV~i~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~~~~~~g----~~~l~l~~~~~~~~~~~~~~~~~~   93 (381)
T 1t47_A           18 FPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNG----SARFVLTSVIKPATPWGHFLADHV   93 (381)
T ss_dssp             SCCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEET----TEEEEEEEESSCCSHHHHHHHHHH
T ss_pred             CcCceEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCCceEEEEEEecC----CEEEEEecCCCCCCcchhHHHHHH
Confidence            56899999999999999999999999999998764321  112345555544    246777664221111         


Q ss_pred             -cCCCcceEEEEEECCHHHHHHHHHHcCCeEecCCeecC--CCCEEEEEEECCCCCEEEEeecC-------C--------
Q 018138          179 -DIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVK--GGNTVIAFIEDPDGYKFELLERG-------P--------  240 (360)
Q Consensus       179 -~~g~g~~hi~f~V~Dld~~~~rL~~~G~~~~~~p~~~~--~g~~~~~~~~DPdG~~iEl~~~~-------~--------  240 (360)
                       ..+.++.|++|+|+|+++++++++++|+++..+|....  .|....+.++||+|+.++|+++.       +        
T Consensus        94 ~~~g~gv~~iaf~V~D~~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~~pgg~~~~lv~~~~~~~~f~p~~~~~~~~  173 (381)
T 1t47_A           94 AEHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRTGYDGPYLPGYVAAAPI  173 (381)
T ss_dssp             HHHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEEEECSSSSTTCEECCCS
T ss_pred             HhcCCceEEEEEEECCHHHHHHHHHHcCCEEeeccccccCCCCeEEEEEEecCCCcEEEEEecCCCCCCCCCCCcccccc
Confidence             13568999999999999999999999999988776532  23334788999999999999752       0        


Q ss_pred             -------CCCCceeceeeec--CHHHHHHHhhhcceEEeeeccCCC-----------------------ccEEEEEEeC-
Q 018138          241 -------TPEPLCQVMLRVG--DLDRAINFYKKYTIAVMGYGPEDK-----------------------NAVLELTYNH-  287 (360)
Q Consensus       241 -------~~~~i~hv~L~V~--D~e~a~~FY~~~~~~~lG~~~~~~-----------------------~~~l~l~~~~-  287 (360)
                             ...+++|+++.|+  |++++.+||++    +|||+....                       ...+.+.... 
T Consensus       174 ~~~~~~~~~~~idHv~l~V~~~dl~~a~~FY~~----vLGf~~~~~~~~~~i~~~~~~~~~~~l~~~~g~v~i~l~~~~~  249 (381)
T 1t47_A          174 VEPPAHRTFQAIDHCVGNVELGRMNEWVGFYNK----VMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPAL  249 (381)
T ss_dssp             SCCCSSCSCCEEEEEEEECCTTCHHHHHHHHHH----HHCCEECSCCBCHHHHTTTTSEEEEEEECTTSCSEEEEEEECC
T ss_pred             ccCCCCCCceEEeEEEEeeccccHHHHHHHHHH----hhCCEEeeecCcceeccCCccEEEEEEECCCCcEEEEEecCCc
Confidence                   0136899999999  99999999999    999874321                       0112222211 


Q ss_pred             -Cccc-------ccCCCCeeEEEEEeCCHHHHHHHHHHcCCeEeeCCcccCC--------C--------CcEEEEEECCC
Q 018138          288 -GVTE-------YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPG--------I--------NTKITACLDPD  343 (360)
Q Consensus       288 -~~~~-------~~~g~g~~hiaf~V~Dl~~~~~~l~~~G~~i~~~p~~~~~--------~--------~~~~~~~~DPd  343 (360)
                       ....       ...+.|++|+||.|+|+++++++|+++|+++...|...-.        .        ...++|-+||+
T Consensus       250 ~~~~s~~~~~l~~~~g~Gv~HiAf~vdDi~~~~~~L~~~Gv~~~~~p~~Yy~~l~~R~~~~~~~~~~l~~~~il~d~d~~  329 (381)
T 1t47_A          250 AKKKSQIDEYLEFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTPDSYYDTLGEWVGDTRVPVDTLRELKILADRDED  329 (381)
T ss_dssp             SSSCCHHHHHHHHHTSCEEEEEEEECSCHHHHHHHHHHTTCCBCCCCGGGTTSHHHHHCCCSSCHHHHHHHTCEEEECSS
T ss_pred             CCCccHHHHHHHHhCCCCcceEEEecCCHHHHHHHHHHcCCccCCCCccHHHHHHHhccccchhHHHHHHhCeEEeeCCC
Confidence             0000       1246789999999999999999999999999887643110        0        02367889999


Q ss_pred             CCeEEEEcCc
Q 018138          344 GWKSVFVDNL  353 (360)
Q Consensus       344 G~~iel~~~~  353 (360)
                      |.++++++..
T Consensus       330 g~llqift~~  339 (381)
T 1t47_A          330 GYLLQIFTKP  339 (381)
T ss_dssp             CEEEEEEBCC
T ss_pred             CeEEEEeccC
Confidence            9999998764

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.89  E-value=1.3e-21  Score=191.73  Aligned_cols=208  Identities=18%  Similarity=0.283  Sum_probs=148.6

Q ss_pred             cccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCC--CCCeEEEEEeeCCCCceEEEEEEecCCCC-----------
Q 018138          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIP--EDRYTNAFLGYGPEDSHFVVELTYNYGVD-----------  176 (360)
Q Consensus       110 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~--~~~~~~~~l~~g~~~~~~~lel~~~~~~~-----------  176 (360)
                      +.+++++||.|.|+|++++.+||+++|||+++.+.+.+  ...+..++++.+    ...+.+..+..+.           
T Consensus        21 ~~i~~i~HV~i~V~Dle~a~~FY~~~LGf~~v~~~~~~~g~~~~~~~~l~~g----~~~l~L~~~~~~~~~~~~~~~~~~   96 (424)
T 1sqd_A           21 FKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSG----DLRFLFTAPYSPSLSAGEIKPTTT   96 (424)
T ss_dssp             SCEEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEET----TEEEEEEEECCGGGTTTCCGGGCC
T ss_pred             ccCCeEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCceeEEEEEEcCC----CEEEEEecCCCCcccccccccccc
Confidence            56789999999999999999999999999998765432  223445566543    2466666542111           


Q ss_pred             --------C------CcCCCcceEEEEEECCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCCC-
Q 018138          177 --------K------YDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT-  241 (360)
Q Consensus       177 --------~------~~~g~g~~hi~f~V~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~~-  241 (360)
                              .      ...+.|+.|++|+|+|+++++++++++|+++..+|....++ .....+++|+|+.++|+++... 
T Consensus        97 ~p~~~~~~~~~~~~~~~~g~gv~~iAf~VdDvdaa~~~l~a~Ga~~~~~P~~~~~~-~~~~~i~~~Gg~~~~lvd~~g~~  175 (424)
T 1sqd_A           97 ASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNEA-VTIAEVKLYGDVVLRYVSYKAED  175 (424)
T ss_dssp             CSSTTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTT-EEEEEEEEETTEEEEEEEECCC-
T ss_pred             cccccccchHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHcCCEEeecCcCCCCc-eEEEEEEcCCCcEEEEEecCCCC
Confidence                    0      02346899999999999999999999999998887665332 3345666667766666653211 


Q ss_pred             ------------------------CCCceeceeeecCHHHHHHHhhhcceEEeeeccCCC--------------------
Q 018138          242 ------------------------PEPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK--------------------  277 (360)
Q Consensus       242 ------------------------~~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~--------------------  277 (360)
                                              ..+++|+.+.|.|++++.+||++    +|||+....                    
T Consensus       176 ~~~~~f~p~~~~~~~~~~~~~~~~~~~idHv~i~V~dl~~a~~FY~~----~LGf~~~~~~~~~d~~~~~~gl~s~~l~~  251 (424)
T 1sqd_A          176 TEKSEFLPGFERVEDASSFPLDYGIRRLDHAVGNVPELGPALTYVAG----FTGFHQFAEFTADDVGTAESGLNSAVLAS  251 (424)
T ss_dssp             -----CCTTCEECCTTTCCCCCSSEEEEEEEEEECSCHHHHHHHHHH----HHCCEEEEEEC--------CCEEEEEEEC
T ss_pred             CCccccCCCcccccccccCCCcCCcceEeeEEEeeCCHHHHHHHHHH----hhCCeEEEEEcccccccccccceEEEEEc
Confidence                                    12689999999999999999999    888863210                    


Q ss_pred             ---ccEEEEEEeC----Ccc---cc---cCCCCeeEEEEEeCCHHHHHHHHHH----cCCeEeeCC
Q 018138          278 ---NAVLELTYNH----GVT---EY---DKGNGYAQIAIGTDDVYKTAEAIKL----SGGKITREP  326 (360)
Q Consensus       278 ---~~~l~l~~~~----~~~---~~---~~g~g~~hiaf~V~Dl~~~~~~l~~----~G~~i~~~p  326 (360)
                         ...+++....    ...   .+   ..|.|++|+||.|+|+++++++|++    +|+++...|
T Consensus       252 ~~g~~~l~l~e~~~~~~~~s~i~~fl~~~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~p  317 (424)
T 1sqd_A          252 NDEMVLLPINEPVHGTKRKSQIQTYLEHNEGAGLQHLALMSEDIFRTLREMRKRSSIGGFDFMPSP  317 (424)
T ss_dssp             TTSCSEEEEEEECCC---CCHHHHHHHHHTSCEEEEEEEEESCHHHHHHHHHHHGGGTSCCBCCCC
T ss_pred             CCCcEEEEEecccccCCCcchhhhhhhhcCCCCcCEEEEEeCCHHHHHHHHHhhhccCCcEEecCC
Confidence               0111111111    000   11   3577999999999999999999999    899998865

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.87  E-value=3.1e-21  Score=188.62  Aligned_cols=209  Identities=18%  Similarity=0.221  Sum_probs=148.2

Q ss_pred             ccccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCC--CCeEEEEEeeCCCCceEEEEEEecCCCC----------
Q 018138          109 KSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE--DRYTNAFLGYGPEDSHFVVELTYNYGVD----------  176 (360)
Q Consensus       109 ~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~--~~~~~~~l~~g~~~~~~~lel~~~~~~~----------  176 (360)
                      .+.+++++||.|.|+|++++.+||+++|||++..+...+.  .....++++.|+    ..++|..+....          
T Consensus        26 ~~~i~~l~hV~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~G~~~~~~~~~~~G~----~~l~L~~~~~~~~~~~~~p~~~  101 (418)
T 1sp8_A           26 RFHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGS----LSFLFTAPYAHGADAATAALPS  101 (418)
T ss_dssp             SSCEEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEETT----EEEEEEEECCSSCCGGGCSSTT
T ss_pred             cccCceEEEEEEEeCCHHHHHHHHHHhCCCEEEEEEcCCCCCcceEEEEEeeCC----EEEEEecCCCCccccccccccc
Confidence            3567899999999999999999999999999987653321  234556666542    456666542220          


Q ss_pred             ---C------CcCCCcceEEEEEECCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCC-------
Q 018138          177 ---K------YDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP-------  240 (360)
Q Consensus       177 ---~------~~~g~g~~hi~f~V~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~-------  240 (360)
                         .      ..++.|+.|++|+|+|+++++++++++|+++..+|....++ .....+++|.|..++|+++..       
T Consensus       102 ~~~~~~~~~~~~hg~gv~~iAf~V~Dv~~a~~~l~~~Ga~~~~~p~~~~~~-~~~~~i~~~Gg~~~~lvd~~~~~~~~~f  180 (418)
T 1sp8_A          102 FSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRG-FRLAEVELYGDVVLRYVSYPDGAAGEPF  180 (418)
T ss_dssp             CCHHHHHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEETT-EEEEEEEEETTEEEEEEECCTTGGGSSS
T ss_pred             ccchhHHHHHhhcCCeeEEEEEEeCCHHHHHHHHHHCCCEEEeccccccCc-eEEEEEecCCCEEEEEEccCCCCCCccc
Confidence               0      02356899999999999999999999999998887654222 334555666666666655431       


Q ss_pred             ------------C---CCCceeceeeecCHHHHHHHhhhcceEEeeeccCCC-----------------------ccEEE
Q 018138          241 ------------T---PEPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK-----------------------NAVLE  282 (360)
Q Consensus       241 ------------~---~~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~-----------------------~~~l~  282 (360)
                                  .   ..+|+|+++.|.|++++.+||++    +|||+....                       ...++
T Consensus       181 ~p~~~~~~~~~~~~~~~~~idHv~i~V~dl~~a~~FY~~----vLGf~~~~~~~~~d~~~~~~gl~s~~l~~~~g~i~l~  256 (418)
T 1sp8_A          181 LPGFEGVASPGAADYGLSRFDHIVGNVPELAPAAAYFAG----FTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLP  256 (418)
T ss_dssp             STTCEECCCTTCCCCSEEEEEEEEEECSCHHHHHHHHHH----HHCCEEEEEEEC--------CEEEEEEECSSSCCEEE
T ss_pred             CCCCcccCCCCCCCCCcceEeeEEEecCCHHHHHHHHHH----HcCCEEEEEecccccccccccceEEEEEcCCCcEEEE
Confidence                        0   13689999999999999999999    888864211                       00111


Q ss_pred             EEEeC---Ccc----c---ccCCCCeeEEEEEeCCHHHHHHHHHH----cCCeEeeCC
Q 018138          283 LTYNH---GVT----E---YDKGNGYAQIAIGTDDVYKTAEAIKL----SGGKITREP  326 (360)
Q Consensus       283 l~~~~---~~~----~---~~~g~g~~hiaf~V~Dl~~~~~~l~~----~G~~i~~~p  326 (360)
                      +....   ...    .   ...|+|++|+||.|+|+++++++|++    +|+++...|
T Consensus       257 l~e~~~~~~~~s~i~~fl~~~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~P  314 (418)
T 1sp8_A          257 LNEPVHGTKRRSQIQTFLDHHGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAPP  314 (418)
T ss_dssp             EEEECCCSSSCCHHHHHHHHHTSSEEEEEEEEETTHHHHHHHHHTSGGGTSCCBCCCC
T ss_pred             EeecccccCCCcchhhhhhccCCCCcCEEEEEeCCHHHHHHHHhhhhccCCeEEccCC
Confidence            11110   000    0   13478999999999999999999999    799999876

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.86  E-value=1.1e-20  Score=182.55  Aligned_cols=209  Identities=19%  Similarity=0.294  Sum_probs=154.5

Q ss_pred             cccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCC--CCeEEEEEeeCCCCceEEEEEEecCCCCC-------CcC
Q 018138          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE--DRYTNAFLGYGPEDSHFVVELTYNYGVDK-------YDI  180 (360)
Q Consensus       110 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~--~~~~~~~l~~g~~~~~~~lel~~~~~~~~-------~~~  180 (360)
                      ..+++++||.|.|+|++++.+||+++|||++....+.+.  .....+++..|+    ..+++..+..+..       ..+
T Consensus         7 ~~i~~i~Hv~i~V~d~~~a~~fY~~~LGf~~v~~~~~e~g~r~~~~~~l~~G~----i~~~L~~p~~p~s~~~a~fl~~h   82 (393)
T 3isq_A            7 GRFLHFHSVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQGK----IVFVLSSALNPWNKEMGDHLVKH   82 (393)
T ss_dssp             CEEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEETT----EEEEEEEESSTTCHHHHHHHHHH
T ss_pred             CCCceEeEEEEEECCHHHHHHHHHHhcCCEEEEEEcCCCCcEEEEEEEEecCC----EEEEEecCCCCCchHHHHHHHhc
Confidence            457999999999999999999999999999987644321  122345565442    4566766322211       124


Q ss_pred             CCcceEEEEEECCHHHHHHHHHHcCCeEecCCeecCC--CCEEEEEEECCCCCEEEEeecCC-----------C------
Q 018138          181 GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKG--GNTVIAFIEDPDGYKFELLERGP-----------T------  241 (360)
Q Consensus       181 g~g~~hi~f~V~Dld~~~~rL~~~G~~~~~~p~~~~~--g~~~~~~~~DPdG~~iEl~~~~~-----------~------  241 (360)
                      |.|+.|++|+|+|+++++++++++|+++..+|....+  |....+.+++|.|..+.|+++..           .      
T Consensus        83 G~Gv~~iAf~VdDvdaa~~ra~a~Ga~~v~eP~~~~~~~G~v~~a~I~~~Gd~~h~lVdr~~y~~~flpg~~~~~~~~~~  162 (393)
T 3isq_A           83 GDGVKDIAFEVEDCDYIVQKARERGAKIMREPWVEQDKFGKVKFAVLQTYGDTTHTLVEKMNYIGQFLPGYEAPAFMDPL  162 (393)
T ss_dssp             CSEEEEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEESCCSSSCTTCBSCSCCCTT
T ss_pred             CCcEEEEEEEeCCHHHHHHHHHHCCCeEecCccccccCCceeEEEEEEeCCCcEEEEeccccCcCCCCCCcccccccccc
Confidence            6789999999999999999999999999988876543  43457888999999999997421           0      


Q ss_pred             --------CCCceeceeeecC--HHHHHHHhhhcceEEeeeccC---------CC--------------ccEEEEEEeCC
Q 018138          242 --------PEPLCQVMLRVGD--LDRAINFYKKYTIAVMGYGPE---------DK--------------NAVLELTYNHG  288 (360)
Q Consensus       242 --------~~~i~hv~L~V~D--~e~a~~FY~~~~~~~lG~~~~---------~~--------------~~~l~l~~~~~  288 (360)
                              ..+|+|+.+.|.|  ++++.+||++    +||+...         ..              ...++|.....
T Consensus       163 ~~~~~~~~l~~IDHv~i~V~~~~l~~a~~fY~~----~lGf~~~~~~d~~~i~~~~~gl~s~~~~~~~g~v~i~L~ep~~  238 (393)
T 3isq_A          163 LPKLPKCSLEMIDHIVGNQPDQEMVSASEWYLK----NLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAP  238 (393)
T ss_dssp             GGGSCCCCEEEEEEEEEECCTTCHHHHHHHHHH----HHCCEEEEEECTTTSBCSSCEEEEEEEECTTSSCEEEEEEEEC
T ss_pred             ccCCCCCCeeEEeEEEEecCccHHHHHHHHHHH----HhCCEEeccccccccccCCCcEEEEEEECCCCCEEEEEecCCC
Confidence                    1258999999998  9999999999    8888631         00              11222222111


Q ss_pred             -ccc--------ccCCCCeeEEEEEeCCHHHHHHHHHHcCCeEeeCC
Q 018138          289 -VTE--------YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREP  326 (360)
Q Consensus       289 -~~~--------~~~g~g~~hiaf~V~Dl~~~~~~l~~~G~~i~~~p  326 (360)
                       ...        ...|.|++|+||.|+|+.+++++|+++|+++...|
T Consensus       239 ~~~~s~I~~fL~~~~G~Gi~HiA~~~dDi~~~~~~l~~~Gv~~l~~P  285 (393)
T 3isq_A          239 GKKKSQIQEYVDYNGGAGVQHIALKTEDIITAIRHLRERGLEFLSVP  285 (393)
T ss_dssp             CSBCCHHHHHHHHHTSSEEEEEEEEESCHHHHHHHHHHTTCCBCCCC
T ss_pred             CCCCCHHHHHHHHcCCCCcceEEEEcCCHHHHHHHHHHcCCccCCCC
Confidence             010        12478999999999999999999999999999876

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.85  E-value=7.6e-21  Score=182.50  Aligned_cols=229  Identities=15%  Similarity=0.117  Sum_probs=158.7

Q ss_pred             cccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCC----CcCCCcce
Q 018138          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK----YDIGTGFG  185 (360)
Q Consensus       110 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~----~~~g~g~~  185 (360)
                      +.+++++||.+.|+|++++.+|| ++|||+++.+...  ..  .+.+..+    ...+.+...+....    ..++.++.
T Consensus         8 ~~i~~l~hV~~~V~D~~~~~~fy-~~LGf~~~~~~~~--~~--~~l~~~g----~~~l~l~~~~~~~~~~~~~~~g~gv~   78 (357)
T 1cjx_A            8 MGLMGFEFIEFASPTPGTLEPIF-EIMGFTKVATHRS--KN--VHLYRQG----EINLILNNEPNSIASYFAAEHGPSVC   78 (357)
T ss_dssp             TCEEEEEEEEEECSSTTSSHHHH-HHTTCEEEEEESS--SS--EEEEEET----TEEEEEECCSSSHHHHHHHHHSSEEE
T ss_pred             cccceEEEEEEEeCCHHHHHHHH-HHCCCEEEEEeCC--ee--EEEEecC----CEEEEEECCCCchhhhhhhhcCCeEE
Confidence            56899999999999999999999 7999999875431  12  2444433    23455554222110    12457899


Q ss_pred             EEEEEECCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCCC-----------------------C
Q 018138          186 HFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT-----------------------P  242 (360)
Q Consensus       186 hi~f~V~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~~-----------------------~  242 (360)
                      |++|+|+|+++++++++++|+++..+|..  .|......+++|+|..++|+++...                       .
T Consensus        79 ~iaf~V~D~~~~~~~l~~~G~~~~~~~~~--~g~~~~~~~~~~gg~~~~~vd~~~~~~~~~~~~f~~~~~~~~~~~~~~i  156 (357)
T 1cjx_A           79 GMAFRVKDSQKAYNRALELGAQPIHIDTG--PMELNLPAIKGIGGAPLYLIDRFGEGSSIYDIDFVYLEGVERNPVGAGL  156 (357)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCCBCCCCCC--TTCBCCCEEECGGGCEEEEECCCSSSCCHHHHHEEECTTCCSSCCTTSE
T ss_pred             EEEEEeCCHHHHHHHHHHcCCEEeecCCC--CCcEEEEeeeCCCCeEEEEECCCCCCCCcCCCCcccCCccccCCCCCCe
Confidence            99999999999999999999998776632  2322345677777777777754310                       1


Q ss_pred             CCceeceeeec--CHHHHHHHhhhcceEEeeeccCCC--------------------ccEEEEEEe-CCc-cc------c
Q 018138          243 EPLCQVMLRVG--DLDRAINFYKKYTIAVMGYGPEDK--------------------NAVLELTYN-HGV-TE------Y  292 (360)
Q Consensus       243 ~~i~hv~L~V~--D~e~a~~FY~~~~~~~lG~~~~~~--------------------~~~l~l~~~-~~~-~~------~  292 (360)
                      .+++|+.+.|+  |++++.+||++    +|||+....                    ...+++... ... ..      .
T Consensus       157 ~~idHv~l~V~~~dl~~a~~FY~~----vLGf~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~~~~~~~~~~~~~~~~  232 (357)
T 1cjx_A          157 KVIDHLTHNVYRGRMVYWANFYEK----LFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLNEESSKGAGQIEEFLMQ  232 (357)
T ss_dssp             EEEEEECEECCTTHHHHHHHHHHH----HHCCEEEEEEEEECSSCEEEEEEEECTTSSCEEEEEEECTTCCSHHHHHHHH
T ss_pred             eEECceEEeechhhHHHHHHHHHH----hhCCceeeEEEeccCCcceEEEEEECCCCCEEEEEeeecCCCCChHHHhHHh
Confidence            25889999999  99999999999    888864211                    011222211 110 00      1


Q ss_pred             cCCCCeeEEEEEeCCHHHHHHHHHHcCCeEee-CCc--------ccCCCC--------cEEEEEEC----CCCCeEEEEc
Q 018138          293 DKGNGYAQIAIGTDDVYKTAEAIKLSGGKITR-EPG--------PLPGIN--------TKITACLD----PDGWKSVFVD  351 (360)
Q Consensus       293 ~~g~g~~hiaf~V~Dl~~~~~~l~~~G~~i~~-~p~--------~~~~~~--------~~~~~~~D----PdG~~iel~~  351 (360)
                      ..+.|++|+||.|+|+++++++|+++|+++.. .|.        +.+..+        ..++|-+|    |+|++++|++
T Consensus       233 ~~g~g~~HiAf~v~Di~~~~~~L~~~Gv~~~~~~p~~Yy~~l~~r~~~~~~~~~~l~~~~il~d~d~~~~~~g~llqift  312 (357)
T 1cjx_A          233 FNGEGIQHVAFLTDDLVKTWDALKKIGMRFMTAPPDTYYEMLEGRLPDHGEPVDQLQARGILLDGSSVEGDKRLLLQIFS  312 (357)
T ss_dssp             HTSSBCCEEEEEESCHHHHHHHHHHTTCCBCCCCCHHHHHTHHHHSTTCCCCHHHHHHHTCEEEEEEETTEEEEEEEEEB
T ss_pred             cCCCCeeEEEEEcCCHHHHHHHHHHcCCcccCCCChHHHHHHHHHhccccccHHHHHHcCeEEecCCCCCCCCeEEEEec
Confidence            24568999999999999999999999999887 551        111110        12577888    8899999987


Q ss_pred             Cc
Q 018138          352 NL  353 (360)
Q Consensus       352 ~~  353 (360)
                      ..
T Consensus       313 ~~  314 (357)
T 1cjx_A          313 ET  314 (357)
T ss_dssp             CC
T ss_pred             cC
Confidence            53

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=99.85  E-value=3.8e-20  Score=151.21  Aligned_cols=129  Identities=57%  Similarity=1.064  Sum_probs=102.2

Q ss_pred             ceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEEC
Q 018138          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVE  192 (360)
Q Consensus       113 ~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~  192 (360)
                      ++|+|+.|.|+|++++++||+++|||++..+...++..+..+++..++......+++...........+.+..|++|.|+
T Consensus         1 m~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~v~   80 (135)
T 1f9z_A            1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVD   80 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEECS
T ss_pred             CcceEEEEEeCCHHHHHHHHHhccCcEEEEecccCCCceEEEEEecCCCCCCcEEEEEEcCCCCcccCCCCccEEEEEeC
Confidence            47999999999999999999999999998765545555667888876533345777776433333334567889999999


Q ss_pred             CHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCCC
Q 018138          193 DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  241 (360)
Q Consensus       193 Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~~  241 (360)
                      |+++++++|+++|+++..+|...++|....++++|||||.|||++..+.
T Consensus        81 d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~~  129 (135)
T 1f9z_A           81 NAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDA  129 (135)
T ss_dssp             CHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC---
T ss_pred             CHHHHHHHHHHCCCEEecCCccCCCCceeEEEEECCCCCEEEEEecCCC
Confidence            9999999999999999988877777754578999999999999997653

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=99.81  E-value=9.6e-19  Score=141.98  Aligned_cols=123  Identities=28%  Similarity=0.377  Sum_probs=96.2

Q ss_pred             cccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEe-------cCCCC---CCc
Q 018138          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTY-------NYGVD---KYD  179 (360)
Q Consensus       110 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~-------~~~~~---~~~  179 (360)
                      |++++|+||.|.|+|++++++||+++|||++..+...++.....+++..++    ..+++..       .....   ...
T Consensus         1 M~i~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~l~l~~~~~~~~~~~~~~~~~~~~   76 (134)
T 3l7t_A            1 MKLKAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGD----IELEIFGNKLTDSNYCAPPERISWP   76 (134)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEETTTTEEEEEEEETT----EEEEEEECCTTSTTCCCCCCCCCSS
T ss_pred             CceeeEeEEEEEeCCHHHHHHHHHHhcCCEEEEEeecCCCcceEEEEecCC----eEEEEEecccccccccCCccccCCC
Confidence            467899999999999999999999999999987765555555567777653    2566666       22111   111


Q ss_pred             -CCCcceEEEEEECCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEee
Q 018138          180 -IGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (360)
Q Consensus       180 -~g~g~~hi~f~V~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~  237 (360)
                       .+.++.|++|.|+|+++++++|+++|+++..+|....+|.+ .+|++|||||.|||+|
T Consensus        77 ~~~~g~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~e  134 (134)
T 3l7t_A           77 REACGLRHLAFYVEDVEASRQELIALGIRVEEVRYDDYTGKK-MAFFFDPDGLPLELHE  134 (134)
T ss_dssp             SCCSEEEEEEEECSCHHHHHHHHHHHTCCCCCCEECTTSCCE-EEEEECTTCCEEEEEC
T ss_pred             CCCCCeEEEEEEECCHHHHHHHHHhCCCcccceeccCCCceE-EEEEECCCCCEEEEeC
Confidence             45588999999999999999999999998877665555544 6999999999999985

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=99.81  E-value=7e-19  Score=146.18  Aligned_cols=125  Identities=54%  Similarity=0.889  Sum_probs=96.8

Q ss_pred             cccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEE
Q 018138          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGI  189 (360)
Q Consensus       110 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f  189 (360)
                      |.+++|+||.|.|+|++++++||+++|||++..+...++..+..+++..++...+..|++...........+.++.|++|
T Consensus         4 m~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f   83 (144)
T 2c21_A            4 MPSRRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIAI   83 (144)
T ss_dssp             --CCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEE
T ss_pred             CccceeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCCCceEEEEEecCCCCCCCCCCCceEEEE
Confidence            56789999999999999999999999999998765444445666888876532245788876543333334567899999


Q ss_pred             EECCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecC
Q 018138          190 AVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (360)
Q Consensus       190 ~V~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~  239 (360)
                      .|+|+++++++|+++|+++..+     +|.+.++||+|||||.|||++..
T Consensus        84 ~v~d~~~~~~~l~~~G~~~~~~-----~g~~~~~~~~DPdG~~iel~~~~  128 (144)
T 2c21_A           84 GVEDVKELVADMRKHDVPIDYE-----DESGFMAFVVDPDGYYIELLNEK  128 (144)
T ss_dssp             EESCHHHHHHHHHHTTCCEEEE-----CSSSSEEEEECTTSCEEEEEEHH
T ss_pred             EeCCHHHHHHHHHHCCCEEecc-----CCcEEEEEEECCCCCEEEEEEcC
Confidence            9999999999999999998754     44444459999999999999854

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=99.81  E-value=5.6e-19  Score=143.38  Aligned_cols=123  Identities=26%  Similarity=0.360  Sum_probs=94.6

Q ss_pred             ccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCC-------cCCCc
Q 018138          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKY-------DIGTG  183 (360)
Q Consensus       111 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~-------~~g~g  183 (360)
                      |+.+|+||+|.|+|++++++||+++|||++..+...++.+...+++..++    ..+++.........       ..+.+
T Consensus         2 m~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~g   77 (134)
T 3rmu_A            2 MLGRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGN----TKMELLHPLGLDSPIAGFLQKNKAGG   77 (134)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEECSS----SEEEEEEECSTTCTTHHHHHHCTTCE
T ss_pred             ccceeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEecCC----EEEEEEecCCCCchhhhhhhccCCCC
Confidence            67899999999999999999999999999986654444456678887653    25666654322211       23458


Q ss_pred             ceEEEEEECCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEE--ECCCCCEEEEee
Q 018138          184 FGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFI--EDPDGYKFELLE  237 (360)
Q Consensus       184 ~~hi~f~V~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~--~DPdG~~iEl~~  237 (360)
                      +.|++|.|+|+++++++|+++|+++..++.....++...+++  +|||||.|||++
T Consensus        78 ~~hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~e  133 (134)
T 3rmu_A           78 MHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPKDCGGVLVELEQ  133 (134)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCTTBCCCCEECTTSSEEEEECSCSSCCSCEEEEE
T ss_pred             ceEEEEEcCCHHHHHHHHHHcCCcccCCCcccCCCCceEEEEecCCCCcEEEEEEc
Confidence            899999999999999999999999877654444433445666  899999999987

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=99.80  E-value=3.8e-19  Score=150.09  Aligned_cols=128  Identities=20%  Similarity=0.179  Sum_probs=91.7

Q ss_pred             cccccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCC-----cCCC
Q 018138          108 VKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKY-----DIGT  182 (360)
Q Consensus       108 ~~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~-----~~g~  182 (360)
                      ++...|+|+|+.|.|+|+++|++||+++|||++..+...++  .....+..........+.+.........     ..+.
T Consensus        20 ~~~~~Mri~~v~I~V~Dle~A~~FY~dvLGf~v~~d~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~   97 (155)
T 4g6x_A           20 FQSNAMRIHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGA--DRWLTVVSPEAPDGTQLLLEPSSHAAVTPFKEALVAD   97 (155)
T ss_dssp             ---CCCCCCEEEEEESCHHHHHHHHHHTTCCEEEEEEEETT--EEEEEEECTTCTTSCEEEEEECCSTTHHHHHHHHHHT
T ss_pred             eccCceEEEEEEEEeCCHHHHHHHHHHHhCCEEEEeecCCC--ceEEEEeccCCCcceEEEeccCCCccccccccccccC
Confidence            44567799999999999999999999999999976544332  3334444333332333333222211110     1234


Q ss_pred             cceEEEEEECCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecC
Q 018138          183 GFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (360)
Q Consensus       183 g~~hi~f~V~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~  239 (360)
                      +..|++|.|+|+++++++|+++|+++..+|...++|  +.+||+|||||.|||+|..
T Consensus        98 g~~~l~f~VdDvda~~~~l~~~Gv~~~~~p~~~~~g--~~~~f~DPdGn~iel~q~~  152 (155)
T 4g6x_A           98 GIPAASFAVDDIAAEYERLSALGVRFTQEPTDMGPV--VTAILDDTCGNLIQLMQIA  152 (155)
T ss_dssp             TCCSEEEEESCHHHHHHHHHHTTCCEEEEEEECSSC--EEEEEECSSSCEEEEEEC-
T ss_pred             CceEEEeeechhhhhhhHHhcCCcEEeeCCEEcCCe--EEEEEECCCCCEEEEEEEC
Confidence            678999999999999999999999999988887776  3689999999999999864

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=99.80  E-value=1.8e-18  Score=140.71  Aligned_cols=125  Identities=18%  Similarity=0.249  Sum_probs=96.7

Q ss_pred             cccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEE
Q 018138          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGI  189 (360)
Q Consensus       110 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f  189 (360)
                      +|+++|+||.|.|+|++++++||+++|||++..+...++ ....+.+..+  .....+.+.............+..|++|
T Consensus         9 ~m~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~-~~~~~~~~~~--~~~~~l~l~~~~~~~~~~~~~~~~~~~~   85 (133)
T 4hc5_A            9 LMIAYVHSATIIVSDQEKALDFYVNTLGFEKVFDNQLDP-NMRFVTVVPP--GAQTQVALGLPSWYEDGRKPGGYTGISL   85 (133)
T ss_dssp             CSCCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEET-TEEEEEEECT--TCSCEEEEECGGGCSSCCCSCEEEEEEE
T ss_pred             ccccceeEEEEEECCHHHHHHHHHhCcCCcEeeecccCC-CceEEEEECC--CCceEEEEecCcccccccCCCCeEEEEE
Confidence            578899999999999999999999999999987653222 2333444433  2245677766432111122346789999


Q ss_pred             EECCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeec
Q 018138          190 AVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (360)
Q Consensus       190 ~V~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~  238 (360)
                      .|+|+++++++|+++|+++..+|...++|. ..++++||+|+.|||++.
T Consensus        86 ~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~-~~~~~~DP~G~~~el~ee  133 (133)
T 4hc5_A           86 ITRDIDEAYKTLTERGVTFTKPPEMMPWGQ-RATWFSDPDGNQFFLVEE  133 (133)
T ss_dssp             EESCHHHHHHHHHHTTCEESSSCEECTTSC-EEEEEECTTCEEEEEEEC
T ss_pred             EeCCHHHHHHHHHHCCCEeecCCCcCCCCC-EEEEEECCCCCEEEEEeC
Confidence            999999999999999999998888888876 469999999999999873

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=99.79  E-value=1e-18  Score=142.76  Aligned_cols=123  Identities=23%  Similarity=0.249  Sum_probs=94.9

Q ss_pred             cccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEe-eCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCC-----cCCCc
Q 018138          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKR-DIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKY-----DIGTG  183 (360)
Q Consensus       110 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~-~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~-----~~g~g  183 (360)
                      .|+++++||+|.|+|++++++||+ +|||++..+. ..+......+++..++    ..+++.+.......     ..+.|
T Consensus         3 ~M~~~i~hv~i~v~Dl~~a~~FY~-~lG~~~~~~~~~~~~~~~~~~~~~~~~----~~l~l~~~~~~~~~~~~~~~~~~g   77 (133)
T 3hdp_A            3 HMSLKVHHIGYAVKNIDSALKKFK-RLGYVEESEVVRDEVRKVYIQFVINGG----YRVELVAPDGEDSPINKTIKKGST   77 (133)
T ss_dssp             CCCCCEEEEEEECSCHHHHHHHHH-HTTCEECSCCEEETTTTEEEEEEEETT----EEEEEEEESSTTCTHHHHTTTSCE
T ss_pred             ccceeeCEEEEEECCHHHHHHHHH-HcCCeeecceeccCCcceEEEEEeCCC----EEEEEEecCCCCChHHHHHhcCCc
Confidence            467899999999999999999999 9999997542 2334456677877642    46777764332211     11568


Q ss_pred             ceEEEEEECCHHHHHHHHHHcCCeEecCCee--cCCCCEEEEEEECCCCCEEEEeec
Q 018138          184 FGHFGIAVEDVAKTVDLVKAKGGKVTREPGP--VKGGNTVIAFIEDPDGYKFELLER  238 (360)
Q Consensus       184 ~~hi~f~V~Dld~~~~rL~~~G~~~~~~p~~--~~~g~~~~~~~~DPdG~~iEl~~~  238 (360)
                      ++|++|.|+|+++++++|+++|+++..+|..  ..+| ..++|++||||+.|||+|.
T Consensus        78 ~~hiaf~v~di~~~~~~l~~~G~~~~~~p~~~~~~~g-~~~~~~~dPdG~~iEl~e~  133 (133)
T 3hdp_A           78 PYHICYEVEDIQKSIEEMSQIGYTLFKKAEIAPAIDN-RKVAFLFSTDIGLIELLEK  133 (133)
T ss_dssp             EEEEEEEESCHHHHHHHHTTTTEEEEEEEEEEGGGTT-EEEEEEEETTTEEEEEEEC
T ss_pred             eEEEEEEcCCHHHHHHHHHHcCCccccCCeecccCCC-ceEEEEECCCceEEEEecC
Confidence            8999999999999999999999998876543  2344 4579999999999999973

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=99.78  E-value=2.4e-18  Score=138.94  Aligned_cols=120  Identities=18%  Similarity=0.325  Sum_probs=96.0

Q ss_pred             ceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCC--CcCCCcceEEEEE
Q 018138          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK--YDIGTGFGHFGIA  190 (360)
Q Consensus       113 ~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~--~~~g~g~~hi~f~  190 (360)
                      ++|+||.|.|+|++++++||+++|||++..+...++..+..+++..++   +..+++........  ...+.|+.|++|.
T Consensus         2 m~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~---~~~l~l~~~~~~~~~~~~~~~g~~hi~~~   78 (127)
T 3e5d_A            2 MKIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFED---GARLEIMSRTDVTGKTTGENLGWAHIAIS   78 (127)
T ss_dssp             CCCCEEEEECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECSS---SCEEEEEEETTCCCCCCSSCSSCCCEEEE
T ss_pred             CEEEEEEEEECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcCC---CcEEEEEecCCCCCCCCcCCCceEEEEEE
Confidence            579999999999999999999999999987644444456677887653   24677776543221  1245678999999


Q ss_pred             ECC---HHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEe
Q 018138          191 VED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  236 (360)
Q Consensus       191 V~D---ld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~  236 (360)
                      |+|   +++++++|+++|+++..+|....+|.+ .++++|||||.|||+
T Consensus        79 v~d~~~v~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~  126 (127)
T 3e5d_A           79 TGTKEAVDELTEKLRQDGFAIAGEPRMTGDGYY-ESVVLDPEGNRIEIT  126 (127)
T ss_dssp             CSSHHHHHHHHHHHHHTTCCEEEEEEECTTSCE-EEEEECTTSCEEEEE
T ss_pred             cCCHHHHHHHHHHHHHcCCeEecCcccCCCCcE-EEEEECCCCCEEEEe
Confidence            999   889999999999999888877766644 689999999999996

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=99.77  E-value=2.3e-18  Score=138.57  Aligned_cols=123  Identities=24%  Similarity=0.374  Sum_probs=91.8

Q ss_pred             cccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCC---CCcCCCcceE
Q 018138          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD---KYDIGTGFGH  186 (360)
Q Consensus       110 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~---~~~~g~g~~h  186 (360)
                      |++.+++|+.|.|+|++++++||+++|||++..+...++.....+++..++.    .+++.......   ....+.+..|
T Consensus         1 M~~~~i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~----~l~l~~~~~~~~~~~~~~~~g~~~   76 (126)
T 2p25_A            1 MFFKEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQ----ELEIFISDQFPARPSYPEALGLRH   76 (126)
T ss_dssp             CTTSCCCCEEEEESCHHHHHHHHTTTTCCEEEEEEEEGGGTEEEEEEEETTE----EEEEEECTTCCCCCCSSCCSSCCC
T ss_pred             CcccccceEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCcceEEEEecCCe----EEEEEeccCCCCCCCCCCCccceE
Confidence            5678999999999999999999999999999865322222222345655532    56776532211   1123457889


Q ss_pred             EEEEECCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEee
Q 018138          187 FGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (360)
Q Consensus       187 i~f~V~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~  237 (360)
                      ++|.|+|+++++++|+++|+++..+|....+|. ..+|++|||||.|||++
T Consensus        77 ~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~-~~~~~~DPdG~~iel~e  126 (126)
T 2p25_A           77 LAFKVEHIEEVIAFLNEQGIETEPLRVDDFTGK-KMTFFFDPDGLPLELHE  126 (126)
T ss_dssp             EEEECSCHHHHHHHHHHTTCCCCCCEECTTTCC-EEEEEECTTCCEEEEEC
T ss_pred             EEEEeCCHHHHHHHHHHcCCccccccccCCCCc-EEEEEECCCCCEEEeeC
Confidence            999999999999999999999876665445554 46899999999999975

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=99.77  E-value=7.1e-18  Score=146.31  Aligned_cols=129  Identities=36%  Similarity=0.622  Sum_probs=101.9

Q ss_pred             cccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCc---------------eEEEEEEecCC
Q 018138          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDS---------------HFVVELTYNYG  174 (360)
Q Consensus       110 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~---------------~~~lel~~~~~  174 (360)
                      ....+|+||+|.|+|++++++||+++|||++..+...+...+..+++..+....               ...+++.....
T Consensus        30 ~~~~~l~Hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~  109 (187)
T 3vw9_A           30 TKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWG  109 (187)
T ss_dssp             GTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTCSSEEEEEEETT
T ss_pred             cceeEEEEEEEEeCCHHHHHHHHHHhcCcEEeeccccCCCceeEEEecCCCcccccccccchhhhcccCCceEEEEEecC
Confidence            345799999999999999999999999999998776667778888888764311               24677754322


Q ss_pred             CC-----CCcC----CCcceEEEEEECCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCC
Q 018138          175 VD-----KYDI----GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (360)
Q Consensus       175 ~~-----~~~~----g~g~~hi~f~V~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~  240 (360)
                      ..     .+..    ..+++|++|.|+|+++++++|+++|+++..+|....++.  ++||+|||||.|||++...
T Consensus       110 ~~~~~~~~~~~g~~~~~g~~hl~f~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~--~~~~~DPdG~~iel~~~~~  182 (187)
T 3vw9_A          110 TEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKG--LAFIQDPDGYWIEILNPNK  182 (187)
T ss_dssp             GGGCTTCCCCCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSSTT--CEEEECTTCCEEEEECGGG
T ss_pred             CCCCCccccccCCCCCCceeEEEEEECCHHHHHHHHHHCCCeEeeCCccCCcce--EEEEECCCCCEEEEEEccc
Confidence            11     1111    238899999999999999999999999998877655554  5899999999999998653

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=99.77  E-value=3.9e-18  Score=144.74  Aligned_cols=127  Identities=25%  Similarity=0.444  Sum_probs=99.6

Q ss_pred             cccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCC------cCCCc
Q 018138          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKY------DIGTG  183 (360)
Q Consensus       110 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~------~~g~g  183 (360)
                      +++++|+||+|.|+|++++++||+++|||++..+...++.....+++..++    ..+++.........      ..+.|
T Consensus         4 ~~~~~i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~----~~l~l~~~~~~~~~~~~~~~~~~~g   79 (161)
T 3oa4_A            4 EKSNKLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGE----SKIELLEPLSEESPIAKFIQKRGEG   79 (161)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEGGGTEEEEEEEETT----EEEEEEEESSTTSHHHHHHHHHCSE
T ss_pred             cccCcCCEEEEEECCHHHHHHHHHHccCCeEeeeeccCCCCeEEEEEeCCC----eEEEEEeECCCCChHHHHhhcCCCC
Confidence            357899999999999999999999999999987655555556778887653    46777764332210      23568


Q ss_pred             ceEEEEEECCHHHHHHHHHHcCCeEecC-CeecCCCCEEEEEE--ECCCCCEEEEeecCCC
Q 018138          184 FGHFGIAVEDVAKTVDLVKAKGGKVTRE-PGPVKGGNTVIAFI--EDPDGYKFELLERGPT  241 (360)
Q Consensus       184 ~~hi~f~V~Dld~~~~rL~~~G~~~~~~-p~~~~~g~~~~~~~--~DPdG~~iEl~~~~~~  241 (360)
                      ++|++|.|+|+++++++|+++|+++..+ |....+|. .++|+  +||||+.|||++..+.
T Consensus        80 ~~Hiaf~V~Did~~~~~l~~~G~~~~~~~~~~~~~g~-~~~f~~~~DPdG~~iEl~~~~~~  139 (161)
T 3oa4_A           80 IHHIAIGVKSIEERIQEVKENGVQMINDEPVPGARGA-QVAFLHPRSARGVLYEFCEKKEQ  139 (161)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTTCCBSCSSCEECGGGC-EEEEBCGGGTTTCCEEEEECCCC
T ss_pred             eEEEEEEECCHHHHHHHHHHCCCEecccCcccCCCCc-EEEEEeccCCCeEEEEEEecCCc
Confidence            9999999999999999999999998776 55555454 35677  4999999999998764

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=99.76  E-value=1.1e-17  Score=137.44  Aligned_cols=123  Identities=23%  Similarity=0.306  Sum_probs=93.4

Q ss_pred             cccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCC--CCC-cCCCcceE
Q 018138          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV--DKY-DIGTGFGH  186 (360)
Q Consensus       110 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~--~~~-~~g~g~~h  186 (360)
                      |++++|+||.|.|+|++++++||+++|||++..+...++..+..+++. +    ...|++.+....  ... ..+.+..|
T Consensus         1 M~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~----~~~l~l~~~~~~~~~~~~~~~~g~~h   75 (136)
T 2rk0_A            1 MSLSGVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLP-G----GLSIVLREHDGGGTDLFDETRPGLDH   75 (136)
T ss_dssp             -CEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEECT-T----SCEEEEEEETTCSSSCCCTTSSEEEE
T ss_pred             CCCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEEc-C----CCEEEEEeCCCCcccCCCCCCCCcce
Confidence            567899999999999999999999999999987654332234445554 2    246777664332  111 23457899


Q ss_pred             EEEEE---CCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCC
Q 018138          187 FGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (360)
Q Consensus       187 i~f~V---~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~  240 (360)
                      ++|.|   +|+++++++|+++|+++. ++...++|  ..+||+|||||.|||++..+
T Consensus        76 ~~f~v~~~~d~~~~~~~l~~~G~~~~-~~~~~~~g--~~~~~~DPdG~~iel~~~~~  129 (136)
T 2rk0_A           76 LSFSVESMTDLDVLEERLAKAGAAFT-PTQELPFG--WILAFRDADNIALEAMLGRE  129 (136)
T ss_dssp             EEEEESSHHHHHHHHHHHHHHTCCBC-CCEEETTE--EEEEEECTTCCEEEEEEECT
T ss_pred             EEEEeCCHHHHHHHHHHHHHCCCccc-CccccCCc--eEEEEECCCCCEEEEEEcCC
Confidence            99999   789999999999999987 45555555  46899999999999999765

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=99.76  E-value=1.3e-17  Score=138.31  Aligned_cols=129  Identities=22%  Similarity=0.345  Sum_probs=98.2

Q ss_pred             cccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCC--CceEEEEEEecCCCCCC------cCC
Q 018138          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPE--DSHFVVELTYNYGVDKY------DIG  181 (360)
Q Consensus       110 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~--~~~~~lel~~~~~~~~~------~~g  181 (360)
                      .++.+++||.|.|+|++++++||+++|||++......++.....+++..++.  ..+..|++.+.......      ..+
T Consensus         5 ~m~~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~   84 (148)
T 1jc4_A            5 DLFICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHN   84 (148)
T ss_dssp             CCCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTT
T ss_pred             CccceeeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCCcCcceEEEEeecCCCCChHHHHHHhCC
Confidence            3678999999999999999999999999999876554444556788877652  11246777764332111      123


Q ss_pred             --CcceEEEEEECCHHHHHHHHHHcCCeEe-cCCeecCCCCEEEEEE--ECCCCCEEEEeecC
Q 018138          182 --TGFGHFGIAVEDVAKTVDLVKAKGGKVT-REPGPVKGGNTVIAFI--EDPDGYKFELLERG  239 (360)
Q Consensus       182 --~g~~hi~f~V~Dld~~~~rL~~~G~~~~-~~p~~~~~g~~~~~~~--~DPdG~~iEl~~~~  239 (360)
                        .++.|++|.|+|+++++++|+++|+++. .+|....+|. .++|+  +||||+.|||++.+
T Consensus        85 ~~~g~~h~~~~v~d~~~~~~~l~~~G~~~~~~~p~~~~~g~-~~~~~~~~DPdG~~iel~~~~  146 (148)
T 1jc4_A           85 GRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGN-RINFMHPKSGKGVLIELTQYP  146 (148)
T ss_dssp             TCCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSSC-EEEEBCGGGGTTSCEEEEECC
T ss_pred             CCCceEEEEEECCCHHHHHHHHHHCCCeecCcCcccCCCce-EEEEEeecCCCcEEEEEEecC
Confidence              5789999999999999999999999988 4565544554 45667  99999999999865

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=99.76  E-value=3.2e-17  Score=136.58  Aligned_cols=127  Identities=20%  Similarity=0.230  Sum_probs=96.5

Q ss_pred             cccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeC-----------CCCCeEEEEEeeCCCCceEEEEEEec--CCCC
Q 018138          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDI-----------PEDRYTNAFLGYGPEDSHFVVELTYN--YGVD  176 (360)
Q Consensus       110 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~-----------~~~~~~~~~l~~g~~~~~~~lel~~~--~~~~  176 (360)
                      +++++|+||.|.|+|++++++||++ |||++......           +......+++..+++  +..|++...  ....
T Consensus         7 ~~~~~i~hv~l~v~D~~~a~~FY~~-lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g--~~~l~l~~~~~~~~~   83 (153)
T 1ss4_A            7 NKLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDG--HSRIELSRFLTPPTI   83 (153)
T ss_dssp             CCEEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTS--SCEEEEEEEEESCCC
T ss_pred             ccccceeeEEEEeCCHHHHHHHHHH-CCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCCC--CcEEEEEEecCCCCc
Confidence            4578999999999999999999999 99999865432           123455677876543  235666542  1111


Q ss_pred             -----CCcCCCcceEEEEEECCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCC
Q 018138          177 -----KYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (360)
Q Consensus       177 -----~~~~g~g~~hi~f~V~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~  240 (360)
                           ....+.|++|++|.|+|+++++++|+++|+++..+|...++|. +.+||+||||+.|||++...
T Consensus        84 ~~~~~~~~~~~g~~hl~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~-~~~~~~DPdG~~iel~~~~~  151 (153)
T 1ss4_A           84 ADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENSY-RLCYIRGVEGILIGLAEELG  151 (153)
T ss_dssp             CBCTTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETTTE-EEEEEECGGGCEEEEEEECC
T ss_pred             ccccCCCCCCCceEEEEEEeCCHHHHHHHHHHCCCeecCCCcccCCce-EEEEEECCCCCEEEEEeccC
Confidence                 1123457889999999999999999999999988887766654 47899999999999998653

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=99.76  E-value=1e-17  Score=153.05  Aligned_cols=146  Identities=16%  Similarity=0.239  Sum_probs=112.1

Q ss_pred             cccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEE
Q 018138          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGI  189 (360)
Q Consensus       110 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f  189 (360)
                      ..+++|+||.|.|+|++++++||+++|||++..+..    .  .+++..++    ..+.+.....     .+.++.|++|
T Consensus        22 ~~~~~l~hV~L~V~Dle~s~~FY~~vLGl~~~~~~~----~--~~~L~~g~----~~l~l~~~~~-----~~~~~~hiaf   86 (252)
T 3pkv_A           22 GHMTSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA----D--AFTIQLGV----SQIQFRAAAD-----GTKPFYHIAI   86 (252)
T ss_dssp             ---CCEEEEEEEESCHHHHHHHHHHHHCGGGEEECS----S--EEEEEETT----EEEEEEECCT-----TCCCCCEEEE
T ss_pred             CcCceEEEEEEEeCCHHHHHHHHHHhcCCEEEEccC----C--EEEEEeCC----EEEEEEECCC-----CCCCeeEEEE
Confidence            457899999999999999999999999999986532    1  36777653    3566665322     2346889999


Q ss_pred             EEC--CHHHHHHHHHHcCCeEecC-Cee---cCCCCEEEEEEECCCCCEEEEeecCCC------------CCCceeceee
Q 018138          190 AVE--DVAKTVDLVKAKGGKVTRE-PGP---VKGGNTVIAFIEDPDGYKFELLERGPT------------PEPLCQVMLR  251 (360)
Q Consensus       190 ~V~--Dld~~~~rL~~~G~~~~~~-p~~---~~~g~~~~~~~~DPdG~~iEl~~~~~~------------~~~i~hv~L~  251 (360)
                      .|+  ++++++++|+++ +++..+ +..   ...++...+||+|||||.+||++....            +.+++||.|.
T Consensus        87 ~V~~~dld~~~~rL~~~-v~~~~~~~~~~~~~~~~g~~~~~f~DPdGn~iEl~~~~~~~~~~~~~~~~~~i~glghV~L~  165 (252)
T 3pkv_A           87 NIAANHFQEGKAWLSGF-GELLTENDEDQAYFPFFNAYSCYVEDPSGNIIELISRQQAAPVLDKPFSADQLLSIGEINIT  165 (252)
T ss_dssp             EECTTCHHHHHHHHTTS-SCCCCBTTBSCEEETTTTEEEEEEECTTCCEEEEEEESSSSCCCCSCCCGGGCCEEEEEEEE
T ss_pred             EecHHHHHHHHHHHHhc-ceEeccCCccccccccCCeEEEEEECCCCCEEEEEEeCCCCccccCCCCHHHCcEeeeEEEE
Confidence            995  599999999999 987652 221   122334579999999999999987542            3479999999


Q ss_pred             ecCHHHHHHHhhhcceEEeeeccCC
Q 018138          252 VGDLDRAINFYKKYTIAVMGYGPED  276 (360)
Q Consensus       252 V~D~e~a~~FY~~~~~~~lG~~~~~  276 (360)
                      |.|++++.+|| +    .||++..+
T Consensus       166 v~d~~~~~~fl-~----~LG~~~~~  185 (252)
T 3pkv_A          166 TSDVEQAATRL-K----QAELPVKL  185 (252)
T ss_dssp             CSCHHHHHHHH-H----HTTCCCCG
T ss_pred             eCCHHHHHHHH-H----HcCCCccc
Confidence            99999999999 8    99998654

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=99.74  E-value=1.5e-17  Score=138.91  Aligned_cols=126  Identities=17%  Similarity=0.247  Sum_probs=95.0

Q ss_pred             cccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCC------CCeEEEEEeeCCCCceEEEEEEecCCCC-----CC
Q 018138          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE------DRYTNAFLGYGPEDSHFVVELTYNYGVD-----KY  178 (360)
Q Consensus       110 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~------~~~~~~~l~~g~~~~~~~lel~~~~~~~-----~~  178 (360)
                      +++++|+||.|.|+|++++++||+++|||++......++      ..-..+++..+++   ..+++.......     ..
T Consensus        15 ~~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~l~~~~~~~~~~~~~~   91 (156)
T 3kol_A           15 GNLRKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDG---TILDLFGEPELSPPDPNPE   91 (156)
T ss_dssp             TSSCCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTTSEEEEECTTS---CEEEEEECTTCCCSSSSTT
T ss_pred             cccceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCCcEEEEEeCCC---CEEEEEecCCCCcCCCCCC
Confidence            578899999999999999999999999999975322110      0012366666542   357776643321     11


Q ss_pred             cCCCcceEEEEEEC--CHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCC
Q 018138          179 DIGTGFGHFGIAVE--DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (360)
Q Consensus       179 ~~g~g~~hi~f~V~--Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~  240 (360)
                      ....+..|++|.|+  |+++++++|+++|+++..+|....+| . .+||+|||||.|||++...
T Consensus        92 ~~~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~g-~-~~~~~DPdG~~iel~~~~~  153 (156)
T 3kol_A           92 KTFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVTRPTG-R-GVYFYDPDGFMIEIRCDPE  153 (156)
T ss_dssp             CCCSSCCEEEEECCGGGHHHHHHHHHHTTCCEEEEEEEC-CC-E-EEEEECTTSCEEEEEECCC
T ss_pred             CCCCceEEEEEEecHHHHHHHHHHHHHCCCccccCceecCCc-c-EEEEECCCCCEEEEEecCC
Confidence            23457899999998  99999999999999998887777665 3 6999999999999998764

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=99.74  E-value=4.1e-17  Score=135.34  Aligned_cols=118  Identities=25%  Similarity=0.302  Sum_probs=89.5

Q ss_pred             ccccccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceE
Q 018138          107 WVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGH  186 (360)
Q Consensus       107 ~~~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~h  186 (360)
                      ...+++.+|+||.|.|+|++++++||+++|||++..+..  +..  .+++..++.  +..|++.+...      ..+..|
T Consensus        21 ~~~m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~~~--~~~~~~~~~--~~~l~l~~~~~------~~~~~h   88 (141)
T 3ghj_A           21 GVPMNIKGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDS--ARR--WNFLWVSGR--AGMVVLQEEKE------NWQQQH   88 (141)
T ss_dssp             -----CCCCCEEEEEESCHHHHHHHHHHTSCCEEEEEET--TTT--EEEEEETTT--TEEEEEEECCS------SCCCCE
T ss_pred             cCceeeceecEEEEEeCCHHHHHHHHHHhcCCEEEEecC--CCc--EEEEEecCC--CcEEEEeccCC------CCCCce
Confidence            345778999999999999999999999999999987642  222  366666542  45777776421      235789


Q ss_pred             EEEEEC--CHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEee
Q 018138          187 FGIAVE--DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (360)
Q Consensus       187 i~f~V~--Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~  237 (360)
                      ++|.|+  |+++++++|+++|+++. +|....++....+||+|||||.|||++
T Consensus        89 ~~~~v~~~dld~~~~~l~~~G~~~~-~~~~~~~~~~~~~~~~DPdG~~iel~~  140 (141)
T 3ghj_A           89 FSFRVEKSEIEPLKKALESKGVSVH-GPVNQEWMQAVSLYFADPNGHALEFTA  140 (141)
T ss_dssp             EEEEECGGGHHHHHHHHHHTTCCCE-EEEEEGGGTEEEEEEECTTCCEEEEEE
T ss_pred             EEEEEeHHHHHHHHHHHHHCCCeEe-CCcccCCCCceEEEEECCCCCEEEEEE
Confidence            999997  99999999999999988 444444444457999999999999986

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.74  E-value=3.3e-17  Score=155.94  Aligned_cols=167  Identities=11%  Similarity=0.117  Sum_probs=122.5

Q ss_pred             cccccchhHHHHhhCccccccccCCCCCCCcc-----ccccccccccccccceeEEEEEEeCCHHHHHHHHHHhcCCEEE
Q 018138           67 HFFGAKALKLLRAEGSTIEASTSGNMAPTSNT-----VTEQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLL  141 (360)
Q Consensus        67 ~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~  141 (360)
                      ...+++...+.+++|+.+|+............     ...........+.+.+|+||+|.|+|++++++||+++|||++.
T Consensus       101 ~~~~~~~~~f~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~Hv~l~v~D~~~a~~FY~~vLG~~~~  180 (339)
T 3lm4_A          101 QFGYGKTFEYQSPDGHNLQLLWEAEKYVAPPELRSKILTRPSKKPLQGIPVKRIDHLNLMSSDVTAVKDSFERHLGFRTT  180 (339)
T ss_dssp             STTBCCEEEEECTTCCEEEEECCBCCCCCCGGGCCSSTTCSSCCCSBSSCCCEEEEEEEEESCHHHHHHHHHHHHCCEEE
T ss_pred             CCCceEEEEEECCCCCEEEEEEeeeEcCCCccccccccCcccccCCCCCCcceeeeEEEEcCCHHHHHHHHHHhCCCeEE
Confidence            35567788899999999999776544321100     0001111122346899999999999999999999999999998


Q ss_pred             EEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEECC---HHHHHHHHHHcCCeEecCCeecCCC
Q 018138          142 RKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVED---VAKTVDLVKAKGGKVTREPGPVKGG  218 (360)
Q Consensus       142 ~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~D---ld~~~~rL~~~G~~~~~~p~~~~~g  218 (360)
                      .+.. +++....+|+..+..  ++.+.+.....    ....+++|++|.|+|   +++++++|+++|+++..+|.++..+
T Consensus       181 ~~~~-~~g~~~~~~l~~~~~--~~~l~~~~~~~----~~~~~~~Hiaf~v~d~~~v~~~~~~l~~~G~~i~~~p~~~~~~  253 (339)
T 3lm4_A          181 ERVV-DGNVEIGAWMSSNLL--GHEVACMRDMT----GGHGKLHHLAFFYGTGQHNIDAVEMFRDYDIQIEAGPDKHGIT  253 (339)
T ss_dssp             EEEE-ETTEEEEEEEESSSS--SCSEEEEECTT----SCCSEEEEEEEECCCHHHHHHHHHHHHHTTCEEEEEEEEETGG
T ss_pred             EEEe-cCCcEEEEEEEeCCC--ceEEEEeccCC----CCCCceeEEEEEeCCHHHHHHHHHHHHHCCCeEEeCCcccccC
Confidence            7654 333345678877653  34566665211    123468999999999   8889999999999999888877766


Q ss_pred             CEEEEEEECCCCCEEEEeecCC
Q 018138          219 NTVIAFIEDPDGYKFELLERGP  240 (360)
Q Consensus       219 ~~~~~~~~DPdG~~iEl~~~~~  240 (360)
                      ...++|++||+||.||++....
T Consensus       254 ~~~~~y~~DPdG~~iEl~~~~~  275 (339)
T 3lm4_A          254 QSQFLYVFEPGGNRIELFGEAG  275 (339)
T ss_dssp             GEEEEEEECTTSCEEEEECCCC
T ss_pred             CceEEEEEcCCCCEEEEEEcCC
Confidence            6678999999999999986543

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=99.74  E-value=4.5e-17  Score=132.29  Aligned_cols=121  Identities=21%  Similarity=0.327  Sum_probs=92.8

Q ss_pred             cccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCC---CCCcCCCcceE
Q 018138          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV---DKYDIGTGFGH  186 (360)
Q Consensus       110 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~---~~~~~g~g~~h  186 (360)
                      |.+.+|+||.|.|+|++++++||+++|||++....    ..  .+++..++    ..+.+......   .......+..|
T Consensus         6 m~~~~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~----~~--~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~   75 (133)
T 3ey7_A            6 MKISHLDHLVLTVADIPTTTNFYEKVLGMKAVSFG----AG--RIALEFGH----QKINLHQLGNEFEPKAQNVRVGSAD   75 (133)
T ss_dssp             CCCCEEEEEEEEESCHHHHHHHHHHHHCCEEEEET----TT--EEEEEETT----EEEEEEETTSCCSSCCTTCCTTCCE
T ss_pred             eEecccCEEEEEECCHHHHHHHHHHccCceEEEec----CC--eEEEEcCC----EEEEEEcCCCCccccCCCCCCCccE
Confidence            45789999999999999999999999999998652    12  35666553    35666553221   11224557899


Q ss_pred             EEEEECC-HHHHHHHHHHcCCeEecCCeecCC--CCEEEEEEECCCCCEEEEeecCC
Q 018138          187 FGIAVED-VAKTVDLVKAKGGKVTREPGPVKG--GNTVIAFIEDPDGYKFELLERGP  240 (360)
Q Consensus       187 i~f~V~D-ld~~~~rL~~~G~~~~~~p~~~~~--g~~~~~~~~DPdG~~iEl~~~~~  240 (360)
                      ++|.|+| +++++++|+++|+++..+|....+  +....+|++|||||.|||++..+
T Consensus        76 ~~~~v~dd~~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~  132 (133)
T 3ey7_A           76 LCFITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEVSTYSN  132 (133)
T ss_dssp             EEEECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEESCC
T ss_pred             EEEEeCcHHHHHHHHHHHCCCccccCCccccCCCCCeEEEEEECCCCCEEEEEecCC
Confidence            9999997 999999999999999877755443  22357999999999999998753

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=99.73  E-value=1.6e-17  Score=140.33  Aligned_cols=122  Identities=25%  Similarity=0.363  Sum_probs=95.4

Q ss_pred             cccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCC--------------CCCeEEEEEeeCCCCceEEEEEEecCCC
Q 018138          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIP--------------EDRYTNAFLGYGPEDSHFVVELTYNYGV  175 (360)
Q Consensus       110 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~--------------~~~~~~~~l~~g~~~~~~~lel~~~~~~  175 (360)
                      .++++|+||+|.|+|++++++||+++|||++..+...+              +.....+++..++    ..|+|.+....
T Consensus        15 ~~~~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~----~~leL~~~~~~   90 (159)
T 3gm5_A           15 LDMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFELGP----LQLELIEPDEN   90 (159)
T ss_dssp             CCGGGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEETT----EEEEEEEECSS
T ss_pred             cccccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEecCC----EEEEEEEECCC
Confidence            57889999999999999999999999999987543332              2445678887653    46888765432


Q ss_pred             CC-C-----cCCCcceEEEEEECCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCC--CCEEEEeec
Q 018138          176 DK-Y-----DIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPD--GYKFELLER  238 (360)
Q Consensus       176 ~~-~-----~~g~g~~hi~f~V~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPd--G~~iEl~~~  238 (360)
                      .. .     ..+.|++|++|.|+|+++++++|+++|+++..++. . .| .+++|+.|||  |+.|||+++
T Consensus        91 ~~~~~~~l~~~~~g~~Hiaf~v~di~~~~~~l~~~G~~~~~~~~-~-~g-~~~~~~~dpd~~G~~iEl~e~  158 (159)
T 3gm5_A           91 PSTWREFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQKGD-F-EG-GRYAYIDTLRALKVMIELLEN  158 (159)
T ss_dssp             SCHHHHHHHHHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEE-E-TT-EEEEEESCHHHHSSEEEEEEE
T ss_pred             CChhHHHhhcCCceEEEEEEEcCCHHHHHHHHHHCCCcEeeccc-c-CC-eeEEEEeccccCcEEEEEEec
Confidence            21 1     13568999999999999999999999999876543 2 23 4589999999  999999985

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=99.73  E-value=8.8e-17  Score=139.16  Aligned_cols=130  Identities=35%  Similarity=0.613  Sum_probs=97.5

Q ss_pred             cccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCC---------------CceEEEEEEecCC
Q 018138          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPE---------------DSHFVVELTYNYG  174 (360)
Q Consensus       110 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~---------------~~~~~lel~~~~~  174 (360)
                      +.+++++||.|.|+|++++++||+++|||++..+...++..+..+++..++.               ..+..|++.+...
T Consensus        27 ~~~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~L~~~~~  106 (184)
T 2za0_A           27 TKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWG  106 (184)
T ss_dssp             GTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETT
T ss_pred             ccceeEEEEEEEeCCHHHHHHHHHHhcCCEEEEeccCCCCCceeEEecccccccCCcccchheeeecCCCceEEEEecCC
Confidence            4578999999999999999999999999999876544344566677765421               0234677765322


Q ss_pred             C---C--CCc----CCCcceEEEEEECCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCCC
Q 018138          175 V---D--KYD----IGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  241 (360)
Q Consensus       175 ~---~--~~~----~g~g~~hi~f~V~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~~  241 (360)
                      .   +  .+.    ...++.|++|.|+|+++++++|+++|+++..+|....++.  .+||+|||||.|||++....
T Consensus       107 ~~~~~~~~~~~~~~~~~g~~hi~f~v~dvd~~~~~l~~~G~~~~~~p~~~~~~~--~~~~~DPdG~~iel~~~~~~  180 (184)
T 2za0_A          107 TEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKG--LAFIQDPDGYWIEILNPNKI  180 (184)
T ss_dssp             GGGCTTCCCCCSSSSSCCEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSSTT--CEEEECTTCCEEEEECTTTG
T ss_pred             CCCCcccccccCCCCCCCeeEEEEEeCCHHHHHHHHHHCCCeeecCCcCCCcee--EEEEECCCCCEEEEEecCcc
Confidence            1   0  111    1247899999999999999999999999988776544443  58999999999999987653

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=99.72  E-value=8.6e-17  Score=134.58  Aligned_cols=122  Identities=21%  Similarity=0.300  Sum_probs=91.4

Q ss_pred             cccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCC---CCCcCCCcceE
Q 018138          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV---DKYDIGTGFGH  186 (360)
Q Consensus       110 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~---~~~~~g~g~~h  186 (360)
                      +++.+|+||.|.|+|++++++||+++|||++..+.    +.  .+++..++    ..+++......   .......+..|
T Consensus        19 m~i~~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~----~~--~~~l~~~~----~~l~l~~~~~~~~~~~~~~~~g~~h   88 (152)
T 3huh_A           19 MIIDRIDHLVLTVSDISTTIRFYEEVLGFSAVTFK----QN--RKALIFGA----QKINLHQQEMEFEPKASRPTPGSAD   88 (152)
T ss_dssp             -CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEET----TT--EEEEEETT----EEEEEEETTBCCSSCCSSCCTTCCE
T ss_pred             cccceeeEEEEEeCCHHHHHHHHHhcCCCEEEEcc----CC--eEEEEeCC----eEEEEeccCCcCCCcCcCCCCCccE
Confidence            56889999999999999999999999999998652    12  35666653    35666553221   11223457899


Q ss_pred             EEEEEC-CHHHHHHHHHHcCCeEecCCeecCCC--CEEEEEEECCCCCEEEEeecCCC
Q 018138          187 FGIAVE-DVAKTVDLVKAKGGKVTREPGPVKGG--NTVIAFIEDPDGYKFELLERGPT  241 (360)
Q Consensus       187 i~f~V~-Dld~~~~rL~~~G~~~~~~p~~~~~g--~~~~~~~~DPdG~~iEl~~~~~~  241 (360)
                      ++|.++ |+++++++|+++|+++..+|....++  ..+.+||+|||||.|||++..+.
T Consensus        89 i~f~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~~  146 (152)
T 3huh_A           89 LCFITSTPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDGNLIEISQYVEG  146 (152)
T ss_dssp             EEEEESSCHHHHHHHHHHTTCCCSEEEEEEEETTEEEEEEEEECTTCCEEEEEEC---
T ss_pred             EEEEecCCHHHHHHHHHHCCCeEecCCccccCCCCcEEEEEEECCCCCEEEEEecccC
Confidence            999997 99999999999999988777654433  23579999999999999987653

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.71  E-value=1.4e-16  Score=150.57  Aligned_cols=158  Identities=17%  Similarity=0.160  Sum_probs=117.5

Q ss_pred             ccccchhHHHHhhCccccccccCCCCCCCccccccccccccccccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCC
Q 018138           68 FFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIP  147 (360)
Q Consensus        68 ~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~  147 (360)
                      .++++...+.+++|+.+|+.........    .+..-.....+.+.+|+||+|.|+|++++.+|| ++|||++......+
T Consensus       110 ~~~g~~~~~~DP~G~~iel~~~~~~~~~----~~~~~~~~~~~~~~~l~Hv~l~v~D~~~a~~FY-~~LGf~~~~~~~~~  184 (323)
T 1f1u_A          110 KGIGDSVRVEDPLGFPYEFFYETEHVER----LTQRYDLYSAGELVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDS  184 (323)
T ss_dssp             TTBCSEEEEECTTSCEEEEECCBCCCCC----CTTCGGGCCTTCCCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECT
T ss_pred             CCcceEEEEECCCCCEEEEEEecccccc----cccccccCCCCCCceeeeEEEecCCHHHHHHHH-HhCCCeEEEEEEcC
Confidence            4677888899999999999765433210    000000012256899999999999999999999 99999998765544


Q ss_pred             CCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEECCHHH---HHHHHHHcCC--eEecCCeecCCCCEEE
Q 018138          148 EDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAK---TVDLVKAKGG--KVTREPGPVKGGNTVI  222 (360)
Q Consensus       148 ~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~Dld~---~~~rL~~~G~--~~~~~p~~~~~g~~~~  222 (360)
                      .+.....|+.++..  ++.+++....       +.+++|++|.|+|+++   ++++|+++|+  ++..+|.++..+...+
T Consensus       185 ~g~~~~~f~~~~~~--~~~~~~~~~~-------~~~~~Hiaf~v~d~d~v~~~~~~l~~~G~~~~i~~~p~~~~~~~~~~  255 (323)
T 1f1u_A          185 DGVTYAAWMHRKQT--VHDTALTGGN-------GPRMHHVAFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFY  255 (323)
T ss_dssp             TCCEEEEEEESSSS--SCSEEEEESS-------BSEEEEEEEECSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEE
T ss_pred             CCcEEEEEEEcCCC--cccEEEeCCC-------CCCceEEEEECCCHHHHHHHHHHHHHCCCccccccCCCccCCCCcEE
Confidence            44445677776543  3446665421       2378999999999888   9999999999  9988777776655567


Q ss_pred             EEEECCCCCEEEEeecC
Q 018138          223 AFIEDPDGYKFELLERG  239 (360)
Q Consensus       223 ~~~~DPdG~~iEl~~~~  239 (360)
                      +|++||+||.||++...
T Consensus       256 ~y~~DPdG~~iE~~~~~  272 (323)
T 1f1u_A          256 LYILDPDGHRIEIYTQD  272 (323)
T ss_dssp             EEEECTTCCEEEEEECC
T ss_pred             EEEECCCCCEEEEEeCC
Confidence            99999999999999754

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=99.71  E-value=1.8e-16  Score=130.69  Aligned_cols=125  Identities=22%  Similarity=0.334  Sum_probs=92.3

Q ss_pred             ccccccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceE
Q 018138          107 WVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGH  186 (360)
Q Consensus       107 ~~~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~h  186 (360)
                      |.. |...+.||.|.|+|++++++||+++|||++..+... +..+..+++..+..  .+.+++...........+.+..|
T Consensus         5 ~~~-m~~~~~~i~l~v~Dl~~s~~FY~~~LG~~~~~~~~~-~~~~~~~~~~~~~~--~~~l~l~~~~~~~~~~~~~~~~h   80 (139)
T 1twu_A            5 FSS-FQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQ-HNGYDGVMFGLPHA--DYHLEFTQYEGGSTAPVPHPDSL   80 (139)
T ss_dssp             CSS-CBCSCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEE-ETTEEEEEEESSSS--SEEEEEEEETTCCCCCCCCTTCE
T ss_pred             CCC-CCcceeEEeeEeCCHHHHHHHHHhcCCcEEEEeccC-CCCeeEEEEecCCC--ceEEEEeecCCCCCCCCCCCccE
Confidence            565 556778999999999999999999999999865432 23456677776533  34577765433222334557899


Q ss_pred             EEEEECCH---HHHHHHHHHcCCeEec--CCeecCCCCEEEEEEECCCCCEEEEeecC
Q 018138          187 FGIAVEDV---AKTVDLVKAKGGKVTR--EPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (360)
Q Consensus       187 i~f~V~Dl---d~~~~rL~~~G~~~~~--~p~~~~~g~~~~~~~~DPdG~~iEl~~~~  239 (360)
                      ++|.|+|+   ++++++|+++|+++..  .+.....|    .||+|||||.|||++..
T Consensus        81 i~~~v~d~~~l~~~~~~l~~~G~~~~~~~~~~~~~~g----~~~~DPdG~~iel~~~~  134 (139)
T 1twu_A           81 LVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGG----VTIEDPDGWRIVFMNSK  134 (139)
T ss_dssp             EEEECCCHHHHHHHHHHHHHTTCCEECCSSHHHHSSE----EEEECTTCCEEEEESSC
T ss_pred             EEEEeCCcchHHHHHHHHHHcCCcCcCCCCcccCCCC----eEEECCCCCEEEEEEcC
Confidence            99999999   9999999999999873  32222222    26999999999999864

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=99.71  E-value=1.2e-16  Score=131.78  Aligned_cols=118  Identities=16%  Similarity=0.285  Sum_probs=87.1

Q ss_pred             ccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeE---EEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEE
Q 018138          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYT---NAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHF  187 (360)
Q Consensus       111 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~---~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi  187 (360)
                      |+++|+||.|.|+|++++++||+++|||++..+...  ..+.   ..++..+.    ..+++......    +..+..|+
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~--~~~~~~~~~~~~~g~----~~l~l~~~~~~----~~~~~~h~   70 (139)
T 1r9c_A            1 MIEGLSHMTFIVRDLERMTRILEGVFDAREVYASDT--EQFSLSREKFFLIGD----IWVAIMQGEKL----AERSYNHI   70 (139)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGG--STTCCSCEEEEEETT----EEEEEEECCCC----SSCCSCEE
T ss_pred             CCceEEEEEEEeCCHHHHHHHHHHhhCCEEeecCCC--ccccccceEEEEECC----EEEEEEeCCCC----CCCCeeEE
Confidence            578999999999999999999999999999865321  1110   01455442    35777654321    13478999


Q ss_pred             EEEEC--CHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecC
Q 018138          188 GIAVE--DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (360)
Q Consensus       188 ~f~V~--Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~  239 (360)
                      +|.|+  |+++++++|+++|+++..+|...+++.+ .+||+|||||.|||++..
T Consensus        71 ~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~-~~~~~DPdG~~iel~~~~  123 (139)
T 1r9c_A           71 AFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGR-SIYFYDDDNHMFELHTGT  123 (139)
T ss_dssp             EEECCGGGHHHHHHHHHHHTCCBCCCCC-----CC-EEEEECTTSCEEEEECCC
T ss_pred             EEEcCHHHHHHHHHHHHHCCCcccCCcccCCCCeE-EEEEECCCCCEEEEEeCC
Confidence            99999  9999999999999998877665554444 699999999999999854

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=99.71  E-value=1.4e-16  Score=128.96  Aligned_cols=119  Identities=16%  Similarity=0.236  Sum_probs=89.6

Q ss_pred             ccccceeEEEEEEe--CCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceE
Q 018138          109 KSDKRRMLHVVYRV--GDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGH  186 (360)
Q Consensus       109 ~~~~~~l~HV~l~V--~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~h  186 (360)
                      .+++.+|+||.|.|  +|++++++||+++|||++..+...... ...+++..++    ..+++......    ...+..|
T Consensus         5 ~m~~~~i~hv~l~v~~~D~~~a~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~~----~~l~l~~~~~~----~~~~~~~   75 (126)
T 2qqz_A            5 RNYIQGIDHVQVAAPVGCEEEARAFYGETIGMEEIPKPEELKK-RGGCWFKCGN----QEIHIGVEQNF----NPAKRAH   75 (126)
T ss_dssp             CCCEEEEEEEEEEECTTTHHHHHHHHTTTTCCEEECCCGGGGG-GCCEEEEETT----EEEEEEECTTC----CCCSSSC
T ss_pred             hcccceeeeEEEEcccccHHHHHHHHHhcCCCEEecCcccccC-CCceEEEeCC----EEEEEEecCCC----CCCCceE
Confidence            46789999999999  899999999999999999754321100 0125666542    35666553221    1246789


Q ss_pred             EEEEECCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecC
Q 018138          187 FGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (360)
Q Consensus       187 i~f~V~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~  239 (360)
                      ++|.|+|+++++++|+++|+++..+|.  .+| ...+|++|||||.|||+++.
T Consensus        76 ~~f~v~d~~~~~~~l~~~G~~~~~~~~--~~g-~~~~~~~DPdG~~iel~~~~  125 (126)
T 2qqz_A           76 PAFYVLKIDEFKQELIKQGIEVIDDHA--RPD-VIRFYVSDPFGNRIEFMENK  125 (126)
T ss_dssp             EEEEETTHHHHHHHHHHTTCCCEEECS--STT-EEEEEEECTTSCEEEEEEEC
T ss_pred             EEEEcCCHHHHHHHHHHcCCCccCCCC--CCC-eeEEEEECCCCCEEEEEeCC
Confidence            999999999999999999999887663  234 34699999999999999864

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.70  E-value=5.9e-16  Score=144.99  Aligned_cols=165  Identities=15%  Similarity=0.157  Sum_probs=118.1

Q ss_pred             ccccchhHHHHhhCccccccccCCCCCCCc-cccccc-ccccc-ccccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEe
Q 018138           68 FFGAKALKLLRAEGSTIEASTSGNMAPTSN-TVTEQN-VLDWV-KSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKR  144 (360)
Q Consensus        68 ~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~-~~~~~-~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~  144 (360)
                      ..+++...+.+++|+.+|+........... ...+.. ..... ...+.+|+||+|.|+|++++++||+++|||++....
T Consensus       102 ~~~~~~~~f~DPdG~~iel~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~i~Hv~l~v~D~~~~~~FY~~~LG~~~~~~~  181 (309)
T 3hpy_A          102 LETGERVRFELPSGHLIELYAEKTCVGNGISEVNPAPWNAQREHGIAPIQLDHCLLYGPNIAEVQKIFTEVLGFYLVERV  181 (309)
T ss_dssp             TTBCCEEEEECTTSCEEEEESCBCBCCCSSCSBSCCSCCGGGGSSSCCSEEEEEEEEESCHHHHHHHHHHTSCCEEEEEE
T ss_pred             CCCeeEEEEECCCCCEEEEEEccceecccccccCCCCCccccCCCcccceeeeEEEEeCCHHHHHHHHHHhcCCEEEEEE
Confidence            466677788999999999976654322100 000000 00011 356899999999999999999999999999998765


Q ss_pred             eCCC-CCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEECCHH---HHHHHHHHcCCeEecCCeecCCCCE
Q 018138          145 DIPE-DRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVA---KTVDLVKAKGGKVTREPGPVKGGNT  220 (360)
Q Consensus       145 ~~~~-~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~Dld---~~~~rL~~~G~~~~~~p~~~~~g~~  220 (360)
                      ..+. ......|+..+...  +.+.+...+      ...+++|++|.|+|++   +++++|+++|+++..+|..+..+..
T Consensus       182 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~------~~~~~~Hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~  253 (309)
T 3hpy_A          182 LSPDGDSDMGIWLSCSHKV--HDIAFVEYP------EKGKLHHCSFLLESWEQVLRAGDIMSMNEVNVDIGPTRHGVTRG  253 (309)
T ss_dssp             ECSSSCSEEEEEEESSSSS--CSEEEEECS------STTEEEEEEEECSSHHHHHHHHHHHHHTTCCBSSCSEECSSSSE
T ss_pred             ecCCCCceEEEEEecCCCc--eeEEEecCC------CCCceeEEEEECCCHHHHHHHHHHHHHCCCEEEeCCccCCCCcc
Confidence            4332 33456788776442  344554421      1235899999998865   4689999999999988888776666


Q ss_pred             EEEEEECCCCCEEEEeecCC
Q 018138          221 VIAFIEDPDGYKFELLERGP  240 (360)
Q Consensus       221 ~~~~~~DPdG~~iEl~~~~~  240 (360)
                      .++|++|||||.|||.....
T Consensus       254 ~~~y~~DPdG~~iE~~~~g~  273 (309)
T 3hpy_A          254 CTIYAWDPSGNRFETFMGGY  273 (309)
T ss_dssp             EEEEEECTTSCEEEEEEECC
T ss_pred             EEEEEECCCCCEEEEEeCCc
Confidence            78999999999999998743

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=99.70  E-value=2.2e-16  Score=128.69  Aligned_cols=119  Identities=18%  Similarity=0.261  Sum_probs=89.0

Q ss_pred             ccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeE---EEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEE
Q 018138          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYT---NAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHF  187 (360)
Q Consensus       111 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~---~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi  187 (360)
                      |+++|+|+.|.|+|++++++||+++|||++..+..  +..+.   ..++..+.    ..+++......    ...+..|+
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~~~~~~~~~~~~~~~~----~~l~l~~~~~~----~~~~~~h~   70 (133)
T 2p7o_A            1 MISGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSG--DKTFSLSKEKFFLIAG----LWICIMEGDSL----QERTYNHI   70 (133)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHHHHCCEECC-------CCCSSCEEEEEETT----EEEEEEECSSC----CCCCSCEE
T ss_pred             CCceEEEEEEEcCCHHHHHHHHHHhcCCEEeeecC--CcccccCCceEEEeCC----EEEEEecCCCC----CCCCeeEE
Confidence            57899999999999999999999999999975432  11110   11455432    35777654321    24578999


Q ss_pred             EEEEC--CHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCC
Q 018138          188 GIAVE--DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (360)
Q Consensus       188 ~f~V~--Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~  240 (360)
                      +|.|+  |+++++++|+++|+++..+|....++++ .+|++|||||.|||++...
T Consensus        71 ~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~-~~~~~DPdG~~iel~~~~~  124 (133)
T 2p7o_A           71 AFQIQSEEVDEYTERIKALGVEMKPERPRVQGEGR-SIYFYDFDNHLFELHAGTL  124 (133)
T ss_dssp             EEECCGGGHHHHHHHHHHHTCCEECCCCCCTTCCC-EEEEECSSSCEEEEECSSC
T ss_pred             EEEcCHHHHHHHHHHHHHCCCcccCCCccCCCCee-EEEEECCCCCEEEEEcCCh
Confidence            99995  9999999999999999888765544444 6999999999999998754

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=99.70  E-value=1.7e-16  Score=126.84  Aligned_cols=115  Identities=19%  Similarity=0.178  Sum_probs=85.7

Q ss_pred             cceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEE
Q 018138          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (360)
Q Consensus       112 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V  191 (360)
                      ++++.|+.|.|+|++++++||+++|||++....+    .  .+++..++.    .+.+......+....+.+ .|++|.|
T Consensus         3 ~m~i~~v~l~v~D~~~a~~FY~~~lG~~~~~~~~----~--~~~~~~~~~----~l~l~~~~~~~~~~~~~~-~~~~~~v   71 (118)
T 2i7r_A            3 AMNLNQLDIIVSNVPQVCADLEHILDKKADYAND----G--FAQFTIGSH----CLMLSQNHLVPLENFQSG-IIIHIEV   71 (118)
T ss_dssp             -CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET----T--EEEEEETTE----EEEEESSCSSSCCCCCSC-EEEEEEC
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHHhCCeeEEeCC----C--EEEEEeCCe----EEEEEcCCCCCcccCCCe-EEEEEEE
Confidence            4689999999999999999999999999875321    2  355665432    333332211111122334 4899999


Q ss_pred             CCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeec
Q 018138          192 EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (360)
Q Consensus       192 ~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~  238 (360)
                      +|+++++++|+++|+++..+|...++|.+ .++++|||||.|||++.
T Consensus        72 ~d~~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~~~  117 (118)
T 2i7r_A           72 EDVDQNYKRLNELGIKVLHGPTVTDWGTE-SLLVQGPAGLVLDFYRM  117 (118)
T ss_dssp             SCHHHHHHHHHHHTCCEEEEEEECTTSCE-EEEEECGGGCEEEEEEC
T ss_pred             CCHHHHHHHHHHCCCceecCCccccCccE-EEEEECCCccEEEEEec
Confidence            99999999999999999888877777755 58999999999999874

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=99.70  E-value=2.3e-16  Score=128.92  Aligned_cols=116  Identities=16%  Similarity=0.111  Sum_probs=89.8

Q ss_pred             ccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEE
Q 018138          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  190 (360)
Q Consensus       111 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~  190 (360)
                      .+.+++||.|.|+|++++++||+++|||++.....    .+  +.+..++   +..+.+....... .....+..|++|.
T Consensus        10 ~~~~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~~----~~--~~~~~~~---~~~l~l~~~~~~~-~~~~~~~~~~~~~   79 (132)
T 3sk2_A           10 PTITPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP----RY--VAFPSSG---DALFAIWSGGEEP-VAEIPRFSEIGIM   79 (132)
T ss_dssp             CCCCCCEEEEECSCHHHHHHHHHHHHTCCCSEECS----SE--EEEECST---TCEEEEESSSCCC-CTTSCCCEEEEEE
T ss_pred             CcceeeEEEEEECCHHHHHHHHHHHcCCeEEEcCC----CE--EEEEcCC---CcEEEEEeCCCCC-cCCCCCcceEEEE
Confidence            35789999999999999999999999999875422    22  3444332   2356666543221 1233467899999


Q ss_pred             ECC---HHHHHHHHHH---cCCeEecCCeecCCCCEEEEEEECCCCCEEEEeec
Q 018138          191 VED---VAKTVDLVKA---KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (360)
Q Consensus       191 V~D---ld~~~~rL~~---~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~  238 (360)
                      |+|   +++++++|++   +|+++..+|...++|  +.++|+|||||.|||++.
T Consensus        80 v~~~~dv~~~~~~l~~~~~~G~~~~~~p~~~~~g--~~~~~~DPdGn~iel~~~  131 (132)
T 3sk2_A           80 LPTGEDVDKLFNEWTKQKSHQIIVIKEPYTDVFG--RTFLISDPDGHIIRVCPL  131 (132)
T ss_dssp             ESSHHHHHHHHHHHHHCSSSCCEEEEEEEEETTE--EEEEEECTTCCEEEEEEC
T ss_pred             eCCHHHHHHHHHHHHhhhcCCCEEeeCCcccCce--EEEEEECCCCCEEEEEeC
Confidence            986   9999999999   999999888888777  469999999999999875

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.70  E-value=4.6e-16  Score=145.43  Aligned_cols=188  Identities=17%  Similarity=0.201  Sum_probs=124.6

Q ss_pred             ccccchhHHHHhhCccccccccCCCCCC--Cccccccc-cccccccccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEe
Q 018138           68 FFGAKALKLLRAEGSTIEASTSGNMAPT--SNTVTEQN-VLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKR  144 (360)
Q Consensus        68 ~~g~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~  144 (360)
                      .++++...+.+++|+.+|+.........  .....+.. ......+.+++|+||.|.|+|++++++||+++|||++....
T Consensus       101 ~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~  180 (307)
T 1mpy_A          101 NSCGRRVRFQAPSGHHFELYADKEYTGKWGLNDVNPEAWPRDLKGMAAVRFDHALMYGDELPATYDLFTKVLGFYLAEQV  180 (307)
T ss_dssp             TTBCCEEEEECTTSCEEEEESCBCBCCSTTCCSBSCCSSCSCCCTTCCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred             CCceEEEEEECCCCCEEEEEEcchhcccccccccCCcCCcccCCCCCcCceeeEEEEcCCHHHHHHHHHHHcCCeeEeee
Confidence            4567778888999999998764432211  00000000 00012356899999999999999999999999999998654


Q ss_pred             eCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCc-ceEEEEEEC---CHHHHHHHHHHcCCeEecCCeecCCCCE
Q 018138          145 DIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTG-FGHFGIAVE---DVAKTVDLVKAKGGKVTREPGPVKGGNT  220 (360)
Q Consensus       145 ~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g-~~hi~f~V~---Dld~~~~rL~~~G~~~~~~p~~~~~g~~  220 (360)
                      ....+.....|+..+...  ..+++....       ..| ++|++|.|+   |+++++++|+++|+++..+|.....+..
T Consensus       181 ~~~~~~~~~~~l~~~~~~--~~~~~~~~~-------~~g~~~hi~f~v~d~~dv~~~~~~l~~~G~~~~~~p~~~~~~~~  251 (307)
T 1mpy_A          181 LDENGTRVAQFLSLSTKA--HDVAFIHHP-------EKGRLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHG  251 (307)
T ss_dssp             ECTTCCEEEEEEESSSBS--CSEEEEECS-------SSSEEEEEEEECSCHHHHHHHHHHHHHHTCCEEEEEEECSSTTC
T ss_pred             ecCCCcEEEEEEEcCCCc--eeEEEecCC-------CCCcceEEEEEcCCHHHHHHHHHHHHHCCCceeeCCccCCCCCc
Confidence            322221223466654332  234444321       224 799999999   5777889999999998877777554433


Q ss_pred             EEEEEECCCCCEEEEeecCCCCC-CceeceeeecCHHHHHHHhhh
Q 018138          221 VIAFIEDPDGYKFELLERGPTPE-PLCQVMLRVGDLDRAINFYKK  264 (360)
Q Consensus       221 ~~~~~~DPdG~~iEl~~~~~~~~-~i~hv~L~V~D~e~a~~FY~~  264 (360)
                      ..+||+|||||.|||++...... ...-+.....+..+...||..
T Consensus       252 ~~~~~~DPdG~~iel~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~  296 (307)
T 1mpy_A          252 KTIYFFDPSGNRNEVFCGGDYNYPDHKPVTWTTDQLGKAIFYHDR  296 (307)
T ss_dssp             EEEEEECTTSCEEEEEECCCBCCTTSCCEEEEGGGHHHHHCTTTC
T ss_pred             eEEEEECCCCcEEEEEecccccCCCCCCeEeecccccccceecCc
Confidence            46899999999999998753211 111234467788888888874

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=99.69  E-value=2.6e-16  Score=131.85  Aligned_cols=120  Identities=15%  Similarity=0.104  Sum_probs=87.6

Q ss_pred             ccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCC-CcCCCcceEEEE
Q 018138          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK-YDIGTGFGHFGI  189 (360)
Q Consensus       111 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~-~~~g~g~~hi~f  189 (360)
                      |+++|.||.|.|+|++++++||+++|||++.....    .  .+++..+++   ..+.+........ .....+..|++|
T Consensus         3 m~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~----~--~~~~~~~~g---~~l~l~~~~~~~~~~~~~~~~~~l~f   73 (148)
T 3rhe_A            3 MLSDPNLVLFYVKNPAKSEEFYKNLLDTQPIESSP----T--FAMFVMKTG---LRLGLWAQEEIEPKAHQTGGGMELSF   73 (148)
T ss_dssp             ----CEEEEEEESCHHHHHHHHHHHHTCCCSEECS----S--EEEEECTTS---CEEEEEEGGGCSSCCC----CEEEEE
T ss_pred             ccccccEEEEEeCCHHHHHHHHHHHcCCEEeccCC----C--EEEEEcCCC---cEEEEecCCcCCccccCCCCeEEEEE
Confidence            56899999999999999999999999999976531    2  356655322   3566655332211 122346789999


Q ss_pred             EECC---HHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCCC
Q 018138          190 AVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  241 (360)
Q Consensus       190 ~V~D---ld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~~  241 (360)
                      .|+|   +++++++|+++|+++..+|...++|  +.++|+|||||.|||++..+.
T Consensus        74 ~v~d~~dvd~~~~~l~~~G~~i~~~p~~~~~G--~~~~~~DPdG~~iel~~~~~~  126 (148)
T 3rhe_A           74 QVNSNEMVDEIHRQWSDKEISIIQPPTQMDFG--YTFVGVDPDEHRLRIFCLKRT  126 (148)
T ss_dssp             ECSCHHHHHHHHHHHHHTTCCEEEEEEEETTE--EEEEEECTTCCEEEEEEEC--
T ss_pred             EcCCHHHHHHHHHHHHhCCCEEEeCCeecCCC--cEEEEECCCCCEEEEEEcChh
Confidence            9987   9999999999999998888887776  469999999999999998753

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=99.68  E-value=1.9e-16  Score=126.56  Aligned_cols=115  Identities=20%  Similarity=0.237  Sum_probs=87.3

Q ss_pred             cccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEE
Q 018138          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGI  189 (360)
Q Consensus       110 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f  189 (360)
                      |.+.++ |+.|.|+|++++++||+++|||++....    +.  .+++..+.. ..+.+.+.....     ...+..|++|
T Consensus         4 m~i~~i-~v~l~v~d~~~a~~FY~~~lG~~~~~~~----~~--~~~~~~~~~-~~~~l~l~~~~~-----~~~~~~~~~~   70 (119)
T 2pjs_A            4 MAVRRV-VANIATPEPARAQAFYGDILGMPVAMDH----GW--IVTHASPLE-AHAQVSFAREGG-----SGTDVPDLSI   70 (119)
T ss_dssp             -CEEEE-EEEEECSCGGGGHHHHTTTTCCCEEEEC----SS--EEEEEEEEE-EEEEEEEESSSB-----TTBCCCSEEE
T ss_pred             cceeEE-EEEEEcCCHHHHHHHHHHhcCCEEEecC----CE--EEEEecCCC-CcEEEEEEcCCC-----CCCceeEEEE
Confidence            456788 9999999999999999999999997631    11  234443321 134566654321     1235679999


Q ss_pred             EECCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeec
Q 018138          190 AVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (360)
Q Consensus       190 ~V~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~  238 (360)
                      .|+|+++++++|+++|+++..+|...++|.+ .+|++|||||.|||+++
T Consensus        71 ~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~~~  118 (119)
T 2pjs_A           71 EVDNFDEVHARILKAGLPIEYGPVTEAWGVQ-RLFLRDPFGKLINILSH  118 (119)
T ss_dssp             EESCHHHHHHHHHHTTCCCSEEEEECTTSCE-EEEEECTTSCEEEEEEC
T ss_pred             EECCHHHHHHHHHHCCCccccCCccCCCccE-EEEEECCCCCEEEEEec
Confidence            9999999999999999998887777766644 69999999999999985

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.68  E-value=5.5e-16  Score=144.44  Aligned_cols=159  Identities=18%  Similarity=0.267  Sum_probs=112.0

Q ss_pred             cccchhHHHHhhCcccccccc-CCCCCCCccccccccccccccccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCC
Q 018138           69 FGAKALKLLRAEGSTIEASTS-GNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIP  147 (360)
Q Consensus        69 ~g~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~  147 (360)
                      .+++...+.+++|+.+|+... ......  +..+.  ...+...+++|+||.|.|+|++++++||+++|||++......+
T Consensus       100 ~~~~~~~~~DPdG~~iel~~~~~~~~~~--~~~~~--~~~~~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~  175 (300)
T 2zyq_A          100 RVDEMIRFADPSGNCLEVFHGTALEHRR--VVSPY--GHRFVTGEQGMGHVVLSTRDDAEALHFYRDVLGFRLRDSMRLP  175 (300)
T ss_dssp             TCSEEEEEECTTCCEEEEEECCCCCCSC--CCCTT--CCCBCCGGGCSCEEEEECSCHHHHHHHHHTTTCCEEEEEEEEC
T ss_pred             cceEEEEEECCCCCEEEEEEcCCcCCCC--CccCC--CcccccCCCccCeEEEEeCCHHHHHHHHHHhcCCEEeeeeccc
Confidence            556667788999999999765 221111  11110  1112246789999999999999999999999999997643222


Q ss_pred             C--------C-CeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEECCHHH---HHHHHHHcCCeEecCCeec
Q 018138          148 E--------D-RYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAK---TVDLVKAKGGKVTREPGPV  215 (360)
Q Consensus       148 ~--------~-~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~Dld~---~~~rL~~~G~~~~~~p~~~  215 (360)
                      .        + .....|+..+..  ++.+.+...+      ...+++|++|.|+|+++   ++++|+++|+++..+|...
T Consensus       176 ~~~~g~~~~g~~~~~~~~~~~~~--~~~~~~~~~~------~~~g~~h~af~v~d~~~v~~~~~~l~~~G~~~~~~p~~~  247 (300)
T 2zyq_A          176 PQMVGRPADGPPAWLRFFGCNPR--HHSLAFLPMP------TSSGIVHLMVEVEQADDVGLCLDRALRRKVPMSATLGRH  247 (300)
T ss_dssp             GGGGTCCTTSCCEEEEEEESSSB--SCSEEEESSC------CSSSEEEEEEEBSSHHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred             ccccccCCCCCceEEEEEEECCC--ccEEEEecCC------CCCCceEEEEEeCCHHHHHHHHHHHHHCCCceeeccccc
Confidence            1        1 234567766532  2345555421      13468999999998655   5999999999998887776


Q ss_pred             CCCCEEEEEEECCCCCEEEEeecC
Q 018138          216 KGGNTVIAFIEDPDGYKFELLERG  239 (360)
Q Consensus       216 ~~g~~~~~~~~DPdG~~iEl~~~~  239 (360)
                      ..+...++||+|||||.|||++..
T Consensus       248 ~~~~~~~~~~~DPdG~~iEl~~~~  271 (300)
T 2zyq_A          248 VNDLMLSFYMKTPGGFDIEFGCEG  271 (300)
T ss_dssp             SSSCCEEEEEECTTSSEEEEEECC
T ss_pred             CCCCeEEEEEECCCCCEEEEEeCC
Confidence            655445799999999999999865

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=99.68  E-value=6e-16  Score=126.24  Aligned_cols=119  Identities=18%  Similarity=0.200  Sum_probs=83.7

Q ss_pred             ccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEE
Q 018138          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  190 (360)
Q Consensus       111 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~  190 (360)
                      +..+|+||.|.|+|++++++||++ |||++...... ...  .+++...+   ...+.+......  .....+..|++|.
T Consensus         3 ~~~~i~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~~-~~~--~~~~~~~~---~~~l~l~~~~~~--~~~~~~~~~l~f~   73 (128)
T 3g12_A            3 LSLLITSITINTSHLQGMLGFYRI-IGFQFTASKVD-KGS--EVHRAVHN---GVEFSLYSIQNP--QRSQIPSLQLGFQ   73 (128)
T ss_dssp             -CEEEEEEEEEESCHHHHHHHHHH-HTCCCEEC------C--CEEEEEET---TEEEEEEECCCC--SSCCCCSEEEEEE
T ss_pred             ccceEEEEEEEcCCHHHHHHHHHH-CCCEEecccCC-CCC--EEEEEeCC---CeEEEEEECCCC--cCCCCCceEEEEE
Confidence            456899999999999999999999 99998754111 112  24444212   134555432221  1222345789999


Q ss_pred             ECCHHHHHHHHHHcCCe-EecCCeecCCCCEEEEEEECCCCCEEEEeecCC
Q 018138          191 VEDVAKTVDLVKAKGGK-VTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (360)
Q Consensus       191 V~Dld~~~~rL~~~G~~-~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~  240 (360)
                      |+|+++++++|+++|++ +..+|...++|..  ++|+|||||.|||.+.++
T Consensus        74 v~dvd~~~~~l~~~G~~~~~~~p~~~~~G~~--~~~~DPdGn~iel~~~~~  122 (128)
T 3g12_A           74 ITDLEKTVQELVKIPGAMCILDPTDMPDGKK--AIVLDPDGHSIELCELEG  122 (128)
T ss_dssp             ESCHHHHHHHHTTSTTCEEEEEEEECC-CEE--EEEECTTCCEEEEEC---
T ss_pred             eCCHHHHHHHHHHCCCceeccCceeCCCccE--EEEECCCCCEEEEEEecc
Confidence            99999999999999999 8878877777643  999999999999998765

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.68  E-value=3.9e-16  Score=146.64  Aligned_cols=152  Identities=18%  Similarity=0.270  Sum_probs=115.4

Q ss_pred             cccccchhHHHHhhCccccccccCCCCCCCccccccccccccccccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeC
Q 018138           67 HFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDI  146 (360)
Q Consensus        67 ~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~  146 (360)
                      ..+|++...+.+++|+.+++..........  ..+     -....+++|+||+|.|+|++++++||+++|||++..+.. 
T Consensus       101 ~~~~~~~~~~~DPdG~~iel~~~~~~~~~~--~~~-----~~~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~-  172 (310)
T 3b59_A          101 TPGGGYGFRFFSPDGLLFEVSSDVAKGAKR--DLA-----RWEGVPVKISHIVLHSPNHQDMVKFFTDVLGFKVSDWLG-  172 (310)
T ss_dssp             STTCCEEEEEECTTSCEEEEEECCCCCCCC--CCC-----TTCCCCCEEEEEEEEETTHHHHHHHHHHTSCCEEEEEET-
T ss_pred             ccCCceEEEEECCCCCEEEEEEcccccCCC--ccC-----CCCCcCcEeceEEEecCCHHHHHHHHHhCCCCEEEEeeC-
Confidence            456778888999999999996655332110  000     012467999999999999999999999999999986532 


Q ss_pred             CCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEECCHHHH---HHHHHHcCCeEecCCeecCCCCEEEE
Q 018138          147 PEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKT---VDLVKAKGGKVTREPGPVKGGNTVIA  223 (360)
Q Consensus       147 ~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~Dld~~---~~rL~~~G~~~~~~p~~~~~g~~~~~  223 (360)
                       +   ...|+.++..  ++.+.+...+        .|++|++|.|+|++++   +++|+++|+++..+|.++..+...++
T Consensus       173 -~---~~~fl~~~~~--~~~l~l~~~~--------~g~~hi~f~v~d~d~~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~  238 (310)
T 3b59_A          173 -D---FMCFLRCNSA--HHRIAILPGP--------PCLNHVAYDMLSVDDMMRGAHRLKVKGIDIGWGPGRHTAGNNTFS  238 (310)
T ss_dssp             -T---TEEEEESSSB--SCSEEEEESS--------SEEEEEEEECSSHHHHHHHHHHHHHTTCCCSEEEEECSTTCCEEE
T ss_pred             -C---eEEEEecCCC--cceEEEECCC--------CceEEEEEEcCCHHHHHHHHHHHHHcCCceeecCccccCCCcEEE
Confidence             1   2477776533  3456665421        4789999999997776   99999999999988887766655679


Q ss_pred             EEECCCCCEEEEeecCC
Q 018138          224 FIEDPDGYKFELLERGP  240 (360)
Q Consensus       224 ~~~DPdG~~iEl~~~~~  240 (360)
                      |++||+||.||+.+...
T Consensus       239 y~~DPdG~~iE~~~~~~  255 (310)
T 3b59_A          239 YFVTPGGFVTEYTSELE  255 (310)
T ss_dssp             EEECTTSCEEEEEECCC
T ss_pred             EEECCCCCEEEEEeCcc
Confidence            99999999999998764

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=99.68  E-value=1e-15  Score=125.53  Aligned_cols=114  Identities=22%  Similarity=0.364  Sum_probs=88.0

Q ss_pred             ccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEE
Q 018138          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  190 (360)
Q Consensus       111 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~  190 (360)
                      |+++|+||.|.|+|++++++||+++|||++.....  .    ..++..+.    ..+.+......  .....+..|++|.
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~----~~~~~~~~----~~l~l~~~~~~--~~~~~~~~h~~~~   68 (135)
T 1nki_A            1 MLTGLNHLTLAVADLPASIAFYRDLLGFRLEARWD--Q----GAYLELGS----LWLCLSREPQY--GGPAADYTHYAFG   68 (135)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--T----EEEEEETT----EEEEEEECTTC--CCCCSSSCEEEEE
T ss_pred             CCceEeEEEEEeCCHHHHHHHHHHhcCCEEEEcCC--C----ceEEecCC----EEEEEEeCCCC--CCCCCCcceEEEE
Confidence            57899999999999999999999999999986532  1    25566542    24666654221  1234478899999


Q ss_pred             EC--CHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCC
Q 018138          191 VE--DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (360)
Q Consensus       191 V~--Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~  240 (360)
                      |+  |+++++++|+++|+++..++..   +++ .++++|||||.|||++...
T Consensus        69 v~~~d~~~~~~~l~~~G~~~~~~~~~---~~~-~~~~~DPdG~~iel~~~~~  116 (135)
T 1nki_A           69 IAAADFARFAAQLRAHGVREWKQNRS---EGD-SFYFLDPDGHRLEAHVGDL  116 (135)
T ss_dssp             ECHHHHHHHHHHHHHTTCCEEECCCS---SSC-EEEEECTTCCEEEEESCCH
T ss_pred             ccHHHHHHHHHHHHHCCCceecCCCC---CeE-EEEEECCCCCEEEEEECCc
Confidence            98  9999999999999998876543   333 6899999999999997653

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=99.67  E-value=4e-16  Score=130.52  Aligned_cols=120  Identities=20%  Similarity=0.312  Sum_probs=91.4

Q ss_pred             cccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCC----C-CCcCCCcc
Q 018138          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV----D-KYDIGTGF  184 (360)
Q Consensus       110 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~----~-~~~~g~g~  184 (360)
                      ||+++|.|+.|.|+|++++++||+++|||++....    ..  .+++..+.    ..|.+......    . ....+.+.
T Consensus         1 MM~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~----~~--~~~~~~~~----~~l~l~~~~~~~~~~~~~~~~~~~~   70 (150)
T 3bqx_A            1 MSLQQVAVITLGIGDLEASARFYGEGFGWAPVFRN----PE--IIFYQMNG----FVLATWLVQNLQEDVGVAVTSRPGS   70 (150)
T ss_dssp             --CCCCCEEEEEESCHHHHHHHHHHTSCCCCSEEC----SS--EEEEECSS----SEEEEEEHHHHHHHHSSCCCSSCCS
T ss_pred             CCccceEEEEEEcCCHHHHHHHHHHhcCCEeecCC----CC--EEEEEcCC----EEEEEEeccccccccCCCCCCCCCe
Confidence            46789999999999999999999999999987643    12  35666532    35666653210    0 11124567


Q ss_pred             eEEEEEE---CCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCC
Q 018138          185 GHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (360)
Q Consensus       185 ~hi~f~V---~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~  240 (360)
                      .|++|.|   +|+++++++|+++|+++..+|...++|.+ .+||+|||||.|||++.+.
T Consensus        71 ~~l~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~~~~~  128 (150)
T 3bqx_A           71 MALAHNVRAETEVAPLMERLVAAGGQLLRPADAPPHGGL-RGYVADPDGHIWEIAFNPV  128 (150)
T ss_dssp             CEEEEECSSGGGHHHHHHHHHHTTCEEEEEEECCTTSSE-EEEEECTTCCEEEEEECTT
T ss_pred             EEEEEEeCCHHHHHHHHHHHHHCCCEEecCCcccCCCCE-EEEEECCCCCEEEEEeCCC
Confidence            8999999   89999999999999999888777666654 6999999999999998754

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=99.67  E-value=2.9e-16  Score=131.05  Aligned_cols=118  Identities=19%  Similarity=0.251  Sum_probs=88.3

Q ss_pred             ccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEE
Q 018138          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  190 (360)
Q Consensus       111 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~  190 (360)
                      .+.++. +.|.|+|++++++||+++|||++..+...++..+...++  +.      +++.......  ....+..|++|.
T Consensus         4 ~i~~i~-i~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~--~~------~~l~~~~~~~--~~~~~~~hl~f~   72 (144)
T 3r6a_A            4 KILQIL-SRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQI--ST------ILLIAGSEEA--LKPFRNTQATFL   72 (144)
T ss_dssp             CEEEEE-EEEEESCHHHHHHHHHHHTTCCCCEECCCSCSSCEEEEE--TT------EEEEESCHHH--HGGGGGCCEEEE
T ss_pred             EEEEEE-EEEEECCHHHHHHHHHHhcCCEEEEEeccCCccEEEEEe--cc------EEEecCCccc--CCCCcceEEEEE
Confidence            356677 999999999999999999999988665433344433333  21      4444332110  111245899999


Q ss_pred             ECCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCCC
Q 018138          191 VEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  241 (360)
Q Consensus       191 V~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~~  241 (360)
                      |+|+++++++|+++|+++..+|...++| + .+||+|||||.|||++..+.
T Consensus        73 V~d~d~~~~~l~~~G~~v~~~p~~~~~G-~-~~~~~DPdG~~iel~~~~~~  121 (144)
T 3r6a_A           73 VDSLDKFKTFLEENGAEIIRGPSKVPTG-R-NMTVRHSDGSVIEYVEHSKI  121 (144)
T ss_dssp             ESCHHHHHHHHHHTTCEEEEEEEEETTE-E-EEEEECTTSCEEEEEEECC-
T ss_pred             eCCHHHHHHHHHHcCCEEecCCccCCCc-e-EEEEECCCCCEEEEEEcCCc
Confidence            9999999999999999999888877776 3 68999999999999998764

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.67  E-value=7.5e-16  Score=142.97  Aligned_cols=162  Identities=19%  Similarity=0.176  Sum_probs=111.8

Q ss_pred             ccccchhHHHHhhCccccccccCCCCCCCccccccccccccccccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCC
Q 018138           68 FFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIP  147 (360)
Q Consensus        68 ~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~  147 (360)
                      .++++...+.+++|+.+|+........ .....+...+....+.+++|+||.|.|+|++++++||+++|||++......+
T Consensus        97 ~~~~~~~~~~DPdG~~iel~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~  175 (292)
T 1kw3_B           97 RKVMGLLCLQDPFGLPLEIYYGPAEIF-HEPFLPSAPVSGFVTGDQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQ  175 (292)
T ss_dssp             HTCSEEEEEECTTSCEEEEEECCCBCT-TSCCCCSSSCCCBCCGGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEE
T ss_pred             cCceEEEEEECCCCCEEEEEECccccc-cCCCCCCCCccccccCCcccceEEEecCCHHHHHHHHHhccCCEEeeeeecc
Confidence            345666678899999999966543210 0011111111112256889999999999999999999999999997543221


Q ss_pred             --CC-CeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEECCHHH---HHHHHHHcCCeEecCCeecCCCCEE
Q 018138          148 --ED-RYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAK---TVDLVKAKGGKVTREPGPVKGGNTV  221 (360)
Q Consensus       148 --~~-~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~Dld~---~~~rL~~~G~~~~~~p~~~~~g~~~  221 (360)
                        .+ .....|+..+..  ++.+.+...+.      ..+++|++|.|+|+++   ++++|+ +|+++..+|.....+...
T Consensus       176 ~~~g~~~~~~~~~~~~~--~~~~~~~~~~~------~~~~~hiaf~v~d~~~v~~~~~~l~-~G~~~~~~p~~~~~~~~~  246 (292)
T 1kw3_B          176 MGPETSVPAHFLHCNGR--HHTIALAAFPI------PKRIHHFMLQANTIDDVGYAFDRLD-AAGRITSLLGRHTNDQTL  246 (292)
T ss_dssp             EETTEEEEEEEEESSSB--SCSEEEECCSC------SSSEEEEEEEBSSHHHHHHHHHHHH-HTTCBCBCSEEESSSCCE
T ss_pred             cCCCccceEEEEEECCC--cceEEEecCCC------CCceEEEEEEcCCHHHHHHHHHHHh-CCCceeecCcccCCCCeE
Confidence              11 234567766532  23455543211      2478999999998654   678999 999999888887766555


Q ss_pred             EEEEECCCCC-EEEEeecC
Q 018138          222 IAFIEDPDGY-KFELLERG  239 (360)
Q Consensus       222 ~~~~~DPdG~-~iEl~~~~  239 (360)
                      ++||+||||| .|||++..
T Consensus       247 ~~y~~DPdG~~~iEl~~~~  265 (292)
T 1kw3_B          247 SFYADTPSPMIEVEFGWGP  265 (292)
T ss_dssp             EEEEECSSTTCEEEEEECC
T ss_pred             EEEEECCCCCeeEEEEECC
Confidence            7899999999 99999865

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=99.67  E-value=5.3e-16  Score=129.22  Aligned_cols=117  Identities=19%  Similarity=0.244  Sum_probs=90.6

Q ss_pred             cceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCC-cCCCcceEEEEE
Q 018138          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKY-DIGTGFGHFGIA  190 (360)
Q Consensus       112 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~-~~g~g~~hi~f~  190 (360)
                      ++++.||.|.|+|++++++||+++|||++..+.  +  .  .+++..++   ...|.+.......+. ..+.+..|++|.
T Consensus        23 m~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~--~--~--~~~~~~~~---~~~l~l~~~~~~~~~~~~~~~~~hl~f~   93 (144)
T 2kjz_A           23 MTHPDFTILYVDNPPASTQFYKALLGVDPVESS--P--T--FSLFVLAN---GMKLGLWSRHTVEPKASVTGGGGELAFR   93 (144)
T ss_dssp             CCCCCEEEEEESCHHHHHHHHHHHHTCCCSEEE--T--T--EEEEECTT---SCEEEEEETTSCSSCCCCSSSSCEEEEE
T ss_pred             cCceeEEEEEeCCHHHHHHHHHHccCCEeccCC--C--C--eEEEEcCC---CcEEEEEeCCCCCCccCCCCCceEEEEE
Confidence            458999999999999999999999999997653  1  2  25555543   235777654332211 223578999999


Q ss_pred             EC---CHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecC
Q 018138          191 VE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (360)
Q Consensus       191 V~---Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~  239 (360)
                      |+   |+++++++|+++|+++..+|...++|  ..+||+|||||.|||+++.
T Consensus        94 v~d~~dv~~~~~~l~~~G~~~~~~~~~~~~g--~~~~~~DPdG~~iel~~~~  143 (144)
T 2kjz_A           94 VENDAQVDETFAGWKASGVAMLQQPAKMEFG--YTFTAADPDSHRLRVYAFA  143 (144)
T ss_dssp             CSSHHHHHHHHHHHHHTTCCCCSCCEEETTE--EEEEECCTTCCEEEEEEEC
T ss_pred             eCCHHHHHHHHHHHHHCCCeEecCceecCCc--eEEEEECCCCCEEEEEecC
Confidence            97   58999999999999998888877665  4689999999999999864

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=99.66  E-value=1.4e-15  Score=125.56  Aligned_cols=115  Identities=23%  Similarity=0.383  Sum_probs=88.0

Q ss_pred             ccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCC-CCCcCCCcceEEEE
Q 018138          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV-DKYDIGTGFGHFGI  189 (360)
Q Consensus       111 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~-~~~~~g~g~~hi~f  189 (360)
                      |+++|+||.|.|+|++++++||+++|||++..+.+  .    .+++..+.    ..+.+...... .......+..|++|
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~----~~~~~~~~----~~l~l~~~~~~~~~~~~~~~~~hi~~   70 (141)
T 1npb_A            1 MLQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN--T----GAYLTCGD----LWVCLSYDEARQYVPPQESDYTHYAF   70 (141)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEET--T----EEEEEETT----EEEEEEECTTCCCCCGGGSCSCEEEE
T ss_pred             CCceEEEEEEEeCCHHHHHHHHHhccCCEEEeecC--C----cEEEEECC----EEEEEEECCCCCCCCCCCCCceEEEE
Confidence            57899999999999999999999999999986532  1    25666542    24666553221 11123457899999


Q ss_pred             EEC--CHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecC
Q 018138          190 AVE--DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (360)
Q Consensus       190 ~V~--Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~  239 (360)
                      .|+  |+++++++|+++|+++..++..   ++ ..+|++|||||.|||++..
T Consensus        71 ~v~~~d~~~~~~~l~~~G~~~~~~~~~---~~-~~~~~~DPdG~~iel~~~~  118 (141)
T 1npb_A           71 TVAEEDFEPLSQRLEQAGVTIWKQNKS---EG-ASFYFLDPDGHKLELHVGS  118 (141)
T ss_dssp             ECCHHHHHHHHHHHHHTTCCEEECCCS---SS-EEEEEECTTCCEEEEEECC
T ss_pred             EeCHHHHHHHHHHHHHCCCeEeccCCC---ce-eEEEEECCCCCEEEEEECc
Confidence            997  9999999999999998876542   33 3689999999999999865

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=99.66  E-value=1.3e-15  Score=126.96  Aligned_cols=120  Identities=23%  Similarity=0.309  Sum_probs=88.1

Q ss_pred             cccccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCC---CCCCcCCCcc
Q 018138          108 VKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYG---VDKYDIGTGF  184 (360)
Q Consensus       108 ~~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~---~~~~~~g~g~  184 (360)
                      ..+++.+|+||.|.|+|++++++||+++|||++....   + .  ..++..++.    .+.+.....   +.......|.
T Consensus        21 ~~m~i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~---~-~--~~~l~~g~~----~l~l~~~~~~~~~~~~~~~~g~   90 (147)
T 3zw5_A           21 QSMLIRRLDHIVMTVKSIKDTTMFYSKILGMEVMTFK---E-D--RKALCFGDQ----KFNLHEVGKEFEPKAAHPVPGS   90 (147)
T ss_dssp             HHTSCEEEEEEEEEESCHHHHHHHHHHHHCCEEEEET---T-T--EEEEEETTE----EEEEEETTSCCSSCCSSCCTTC
T ss_pred             cceecccccEEEEEeCCHHHHHHHHHHhcCCEEEecC---C-C--ceEEEECCc----EEEEEEcCCCcCcccCCCCCCC
Confidence            3467899999999999999999999999999998542   1 1  245555532    455544221   1111234567


Q ss_pred             eEEEEEEC-CHHHHHHHHHHcCCeEecCCeecCC--CCEEEEEEECCCCCEEEEee
Q 018138          185 GHFGIAVE-DVAKTVDLVKAKGGKVTREPGPVKG--GNTVIAFIEDPDGYKFELLE  237 (360)
Q Consensus       185 ~hi~f~V~-Dld~~~~rL~~~G~~~~~~p~~~~~--g~~~~~~~~DPdG~~iEl~~  237 (360)
                      .|++|.+. |+++++++|+++|+++..+|....+  |..+.+||+|||||.|||.+
T Consensus        91 ~~~~~~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdGn~iEl~~  146 (147)
T 3zw5_A           91 LDICLITEVPLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDRNLIEVSN  146 (147)
T ss_dssp             CEEEEECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEE
T ss_pred             ceEEEEeccCHHHHHHHHHHcCCceeeCcccccCCCCceEEEEEECCCCCEEEEec
Confidence            89999886 9999999999999998866654332  32346899999999999986

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=99.66  E-value=1.4e-15  Score=124.29  Aligned_cols=118  Identities=20%  Similarity=0.229  Sum_probs=85.7

Q ss_pred             cceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEE
Q 018138          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (360)
Q Consensus       112 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V  191 (360)
                      .++|+||.|.|+|++++++||+++|||++....+    .  .+.+..+.  ..  +.+......... ...+..|++|.+
T Consensus         7 ~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~----~--~~~~~~~g--~~--~~l~~~~~~~~~-~~~~~~h~~~~~   75 (135)
T 3rri_A            7 PNDVFHLAIPARDLDEAYDFYVTKLGCKLARRYP----D--RITLDFFG--DQ--LVCHLSDRWDRE-VSMYPRHFGITF   75 (135)
T ss_dssp             TTSEEEEEEEESCHHHHHHHHTTTTCCEEEEEET----T--EEEEEETT--EE--EEEEECSCSCSS-CCSSSCEEEEEC
T ss_pred             CCccceEEEEcCCHHHHHHHHHHhcCCEeeccCC----C--cEEEEEeC--CE--EEEEEcCccccc-CCCCCCeEEEEE
Confidence            5789999999999999999999999999965432    1  24454332  12  333332211111 234678999999


Q ss_pred             C---CHHHHHHHHHHcCCeEecCCeec---CCCCEEEEEEECCCCCEEEEeecCC
Q 018138          192 E---DVAKTVDLVKAKGGKVTREPGPV---KGGNTVIAFIEDPDGYKFELLERGP  240 (360)
Q Consensus       192 ~---Dld~~~~rL~~~G~~~~~~p~~~---~~g~~~~~~~~DPdG~~iEl~~~~~  240 (360)
                      .   |+++++++|+++|+++..+|...   ..+....+||+|||||.|||.+...
T Consensus        76 ~~~~d~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~~DPdGn~iel~~~~~  130 (135)
T 3rri_A           76 RDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPSNNLLEFKYYFD  130 (135)
T ss_dssp             SSHHHHHHHHHHHHHTTCCEEEEEEEESTTSTTCEEEEEEECTTCCEEEEEEESS
T ss_pred             cChHhHHHHHHHHHHcCCceecCcccccCCCCCceEEEEEECCCCCEEEEEEECC
Confidence            6   59999999999999988777663   1244457999999999999998653

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=99.66  E-value=9.8e-16  Score=126.08  Aligned_cols=120  Identities=18%  Similarity=0.151  Sum_probs=89.9

Q ss_pred             ccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecC------CCCCCcCCCcc
Q 018138          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY------GVDKYDIGTGF  184 (360)
Q Consensus       111 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~------~~~~~~~g~g~  184 (360)
                      |++++.|+.|.|+|++++++||++ |||++..+..  ...  .+.+..++   ...+.+....      .......+.+.
T Consensus         1 M~~~l~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~--~~~--~~~~~~~~---~~~l~l~~~~~~~~~~~~~~~~~~~~~   72 (138)
T 2a4x_A            1 MSARISLFAVVVEDMAKSLEFYRK-LGVEIPAEAD--SAP--HTEAVLDG---GIRLAWDTVETVRSYDPEWQAPTGGHR   72 (138)
T ss_dssp             -CCEEEEEEEEESCHHHHHHHHHT-TTCCCCGGGG--GCS--EEEEECTT---SCEEEEEEHHHHHHHCTTCCCCBSSCS
T ss_pred             CcceeeEEEEEECCHHHHHHHHHH-cCCcEEecCC--CCc--eEEEEcCC---CeEEEEecCccchhhCcccCCCCCCCe
Confidence            467999999999999999999998 9999875432  122  24444322   2356665421      11111234578


Q ss_pred             eEEEEEEC---CHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecC
Q 018138          185 GHFGIAVE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (360)
Q Consensus       185 ~hi~f~V~---Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~  239 (360)
                      .|++|.|+   |+++++++|+++|+++..+|...++|. +.+||+|||||.|||++..
T Consensus        73 ~~l~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~-~~~~~~DPdG~~iel~~~~  129 (138)
T 2a4x_A           73 FAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQ-RYAIVKDPDGNVVDLFAPL  129 (138)
T ss_dssp             EEEEEECSSHHHHHHHHHHHHHTTCCEEEEEEEETTTE-EEEEEECTTCCEEEEEEEC
T ss_pred             EEEEEEeCCHHHHHHHHHHHHHCCCceeeCCcccCCCc-EEEEEECCCCCEEEEEeCC
Confidence            99999999   999999999999999988887777764 4699999999999999987

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A

Probab=99.66  E-value=2.3e-15  Score=121.64  Aligned_cols=114  Identities=14%  Similarity=0.057  Sum_probs=88.0

Q ss_pred             cccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEE
Q 018138          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGI  189 (360)
Q Consensus       110 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f  189 (360)
                      |+..+..|+.|.|+|++++++||+++|||++..+    ...  .+++..+    ...+.+......    ...+..|++|
T Consensus         1 m~~~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~----~~~--~~~~~~~----~~~l~l~~~~~~----~~~~~~~~~~   66 (124)
T 1xrk_A            1 MAKLTSAVPVLTARDVAEAVEFWTDRLGFSRVFV----EDD--FAGVVRD----DVTLFISAVQDQ----VVPDNTQAWV   66 (124)
T ss_dssp             -CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEE----CSS--EEEEEET----TEEEEEEECSCT----TTGGGCEEEE
T ss_pred             CCcccceeEEEEcCCHHHHHHHHHHccCceEEec----CCC--EEEEEEC----CEEEEEEcCCCC----CCCCceEEEE
Confidence            3456678999999999999999999999999864    122  3555544    235666553321    1124479999


Q ss_pred             EECCHHHHHHHHHHc------CC--eEecCCeecCCCCEEEEEEECCCCCEEEEeecC
Q 018138          190 AVEDVAKTVDLVKAK------GG--KVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (360)
Q Consensus       190 ~V~Dld~~~~rL~~~------G~--~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~  239 (360)
                      .|+|+++++++|+++      |+  ++..+|...++|  ..++++|||||.|||++..
T Consensus        67 ~v~dv~~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~g--~~~~~~DPdG~~iel~~~~  122 (124)
T 1xrk_A           67 WVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWG--REFALRDPAGNCVHFVAEE  122 (124)
T ss_dssp             EEECHHHHHHHHTTTSBSCTTTCSSCEECCCEEETTE--EEEEEECTTCCEEEEEEC-
T ss_pred             EECCHHHHHHHHHHhcccccCCccccccCCceecCCC--CEEEEECCCCCEEEEEEec
Confidence            999999999999999      99  888888887776  4699999999999999864

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=99.66  E-value=2.2e-15  Score=126.13  Aligned_cols=117  Identities=21%  Similarity=0.318  Sum_probs=87.1

Q ss_pred             cccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCc--------eEEEEEEecCCCCCCcCC
Q 018138          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDS--------HFVVELTYNYGVDKYDIG  181 (360)
Q Consensus       110 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~--------~~~lel~~~~~~~~~~~g  181 (360)
                      .|..+|.||.|.|+|++++++||+++|||++...   ++..  .+++..++...        .....+.....      .
T Consensus        21 gM~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~---~~~~--~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~------~   89 (148)
T 2r6u_A           21 GMTGRIVHFEIPFDDGDRARAFYRDAFGWAIAEI---PDMD--YSMVTTGPVGESGMPDEPGYINGGMMQRGE------V   89 (148)
T ss_dssp             TTCCCEEEEEEEESSHHHHHHHHHHHHCCEEEEE---TTTT--EEEEECSCBCTTSSBCSSSCBCEEEEESSS------S
T ss_pred             ccCCceEEEEEEeCCHHHHHHHHHHccCcEEEEC---CCCC--EEEEEeCCcceeecccCCcccccceeecCC------C
Confidence            4567999999999999999999999999999763   1222  35565543210        11123322111      1


Q ss_pred             CcceEEEEEECCHHHHHHHHHHcCCeEecCCeecC-CCCEEEEEEECCCCCEEEEeecCC
Q 018138          182 TGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVK-GGNTVIAFIEDPDGYKFELLERGP  240 (360)
Q Consensus       182 ~g~~hi~f~V~Dld~~~~rL~~~G~~~~~~p~~~~-~g~~~~~~~~DPdG~~iEl~~~~~  240 (360)
                      .+ .|++|.|+|+++++++|+++|+++..+|...+ +|  +.+||+|||||.|||++..+
T Consensus        90 ~g-~~l~f~v~dld~~~~~l~~~G~~~~~~~~~~~~~g--~~~~~~DPdG~~iel~~~~~  146 (148)
T 2r6u_A           90 TT-PVVTVDVESIESALERIESLGGKTVTGRTPVGNMG--FAAYFTDSEGNVVGLWETAR  146 (148)
T ss_dssp             CS-CEEEEECSCHHHHHHHHHHTTCEEEEEEEEETTTE--EEEEEECTTSCEEEEEEECC
T ss_pred             Ce-EEEEEEcCCHHHHHHHHHHcCCeEecCCeecCCCE--EEEEEECCCCCEEEEEecCC
Confidence            34 49999999999999999999999988877666 34  47999999999999998754

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.65  E-value=1.9e-15  Score=145.16  Aligned_cols=160  Identities=17%  Similarity=0.139  Sum_probs=119.9

Q ss_pred             cccccchhHHHHhhCccccccccCCCCCCCccccccccccccccccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeC
Q 018138           67 HFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDI  146 (360)
Q Consensus        67 ~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~  146 (360)
                      ..++++...+.+++|+.+|+.+.........    ..........+.+|+||+|.|+|++++.+||++ |||++......
T Consensus       109 ~~~~g~~~~f~DPdG~~iEl~~~~~~~~~~~----~~~~~~~~~~~~rlgHV~L~v~D~~~t~~Fy~~-LGf~~sd~~~~  183 (365)
T 4ghg_A          109 VKGIGDALRVEDPLGFPYEFFFETTHVERLH----MRYDLYSAGELVRLDHFNQVTPDVPRGRKYLED-LGFRVTEDIQD  183 (365)
T ss_dssp             STTBCSEEEEECTTSCEEEEECCBCCCCCCT----TCTTTCCTTCCCEEEEEEEEESCHHHHHHHHHH-TTCEEEEEEEC
T ss_pred             cCCCceEEEEECCCCCEEEEEEEeecccccc----ccccccccccCcceeEEEEeecCHHHHHHHHHh-cCCEEEEEEec
Confidence            3566778889999999999976654332111    111111224578999999999999999999976 99999887666


Q ss_pred             CCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEECCHHH---HHHHHHHcCCe--EecCCeecCCCCEE
Q 018138          147 PEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAK---TVDLVKAKGGK--VTREPGPVKGGNTV  221 (360)
Q Consensus       147 ~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~Dld~---~~~rL~~~G~~--~~~~p~~~~~g~~~  221 (360)
                      ++.....+|+.++..  ++.+.+...       .+.+++|++|+|+|+++   +.++|+++|+.  +.++|+++.-+...
T Consensus       184 ~~g~~~~~f~~~~~~--hH~la~~~~-------~~~~lhHvaf~v~d~d~v~~~~d~l~~~g~~~~i~~GpgRH~~~~~~  254 (365)
T 4ghg_A          184 DEGTTYAAWMHRKGT--VHDTALTGG-------NGPRLHHVAFSTHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAF  254 (365)
T ss_dssp             TTSCEEEEEEESSSS--SCSEEEEES-------SBSEEEEEEEECSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCE
T ss_pred             CCCceeEEeeecCCc--ccceeeecC-------CCCceeEEEEecCCHHHHHHHHHHHHhCCCCceeEeCCCccCCCCcE
Confidence            666667788887654  445555542       23479999999998665   57788899984  67888888877777


Q ss_pred             EEEEECCCCCEEEEeecCC
Q 018138          222 IAFIEDPDGYKFELLERGP  240 (360)
Q Consensus       222 ~~~~~DPdG~~iEl~~~~~  240 (360)
                      ++||+||+|+.||+.....
T Consensus       255 f~Y~~dP~G~~iE~~t~g~  273 (365)
T 4ghg_A          255 YLYILDPDNHRIEIYTQDY  273 (365)
T ss_dssp             EEEEECTTCCEEEEEECCC
T ss_pred             EEEEECCCCceEEEEcCCc
Confidence            8999999999999987653

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.65  E-value=1.6e-15  Score=144.19  Aligned_cols=160  Identities=13%  Similarity=0.067  Sum_probs=110.4

Q ss_pred             ccccccchhHHHHhhCccccccccCCCCCCCccccccccccccccccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEee
Q 018138           66 SHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRD  145 (360)
Q Consensus        66 ~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~  145 (360)
                      ...+|.+...+.+|+|+.+|+.........++.   .+.+. ....+.+|+||+|.|+|++++.+||+++|||++..+.+
T Consensus       109 ~~~~g~~~~~f~DPdGn~iEl~~~~~~~~~~~~---~~~v~-~~~~i~gl~Hv~L~v~Dle~t~~FY~~vLG~~~~~~~~  184 (335)
T 3oaj_A          109 IERFGEQYVEFDDPHGLHLEIVEREEGEANTWT---FGEVT-PDVAIKGFGGATLLSEQPDKTADLLENIMGLERVGKEG  184 (335)
T ss_dssp             EEETTEEEEEEECTTSCEEEEEECSCSCCCCCC---BTTBC-TTTSCCEEEEEEEECSSHHHHHHHHHHTSCCEEEEEET
T ss_pred             eccCCcEEEEEECCCCCEEEEEEeCCCCcCCCc---CCCCC-hhhhhccccceEEEECCHHHHHHHHHHHhCCEEeeccC
Confidence            456778888899999999999766532211111   11111 23578999999999999999999999999999987632


Q ss_pred             CCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCC-CcceEEEEEECC---HHHHHHHHHHcCCeEecCCeecCCCCEE
Q 018138          146 IPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIG-TGFGHFGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTV  221 (360)
Q Consensus       146 ~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g-~g~~hi~f~V~D---ld~~~~rL~~~G~~~~~~p~~~~~g~~~  221 (360)
                          .  .+.+..+..  +..+.+...........+ .+++|+||.|+|   ++++.++|+++|+++... ....  ...
T Consensus       185 ----~--~~~~~~g~~--~~~l~l~~~~~~~~~~~g~g~~~HiAf~v~d~~~l~~~~~~L~~~G~~~~~~-~~r~--~~~  253 (335)
T 3oaj_A          185 ----D--FVRYRSAGD--IGNVIDLKLTPIGRGQMGAGTVHHIAWRANDDEDQLDWQRYIASHGYGVTPV-RDRN--YFN  253 (335)
T ss_dssp             ----T--EEEEECSSS--SSCEEEEESSCCCBCBCSBTEEEEEEEEESSHHHHHHHHHHHHHTTCCCCCC-EECS--SSE
T ss_pred             ----C--EEEEEeCCC--CcEEEEEeCCCCCcCCCCCcceEEEEEEcCCHHHHHHHHHHHHHCCCCcccc-ccCC--cEE
Confidence                1  133443332  234566553322221223 358999999998   677899999999986533 2222  234


Q ss_pred             EEEEECCCCCEEEEeecCC
Q 018138          222 IAFIEDPDGYKFELLERGP  240 (360)
Q Consensus       222 ~~~~~DPdG~~iEl~~~~~  240 (360)
                      .+||+||+|+.|||....+
T Consensus       254 siYfrDP~G~~iEl~td~p  272 (335)
T 3oaj_A          254 AIYFREHGEILFEIATDPP  272 (335)
T ss_dssp             EEEEECTTSCEEEEEESCS
T ss_pred             EEEEECCCCcEEEEEeCCC
Confidence            6999999999999999855

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}

Probab=99.65  E-value=4e-15  Score=122.11  Aligned_cols=118  Identities=17%  Similarity=0.140  Sum_probs=86.9

Q ss_pred             EEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCC--CCcCCCcceEEEEEECCH
Q 018138          117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD--KYDIGTGFGHFGIAVEDV  194 (360)
Q Consensus       117 HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~--~~~~g~g~~hi~f~V~Dl  194 (360)
                      .+.|.|+|++++++||+++|||++..+...+ +....+.+..+.    ..+.+.......  ....+.+..|++|.|+|+
T Consensus         5 ~i~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-g~~~~~~l~~~~----~~l~l~~~~~~~~~~~~~~~~~~~~~~~v~dv   79 (137)
T 3itw_A            5 VVELAYTDPDRAVDWLVRVFGFRLLLRQPAI-GTIRHADLDTGG----GIVMVRRTGEPYTVSCAGGHTCKQVIVWVSDV   79 (137)
T ss_dssp             EEEEEESCHHHHHHHHHHHHCCEEEEEESSS-SSCSEEEEECSS----SEEEEEETTCCSSCEECCCCCCCEEEEEESCH
T ss_pred             EEEEEECCHHHHHHHHHHccCCEEEEEecCC-CcEEEEEEecCC----eEEEEEecCCCcCccCCCCCcEEEEEEEeCCH
Confidence            4559999999999999999999998764433 333345565443    245554432111  111223344999999999


Q ss_pred             HHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCC
Q 018138          195 AKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (360)
Q Consensus       195 d~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~  240 (360)
                      ++++++|+++|+++..+|...++|.+ .++|+|||||.|||++..+
T Consensus        80 ~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~~~~~  124 (137)
T 3itw_A           80 DEHFMRSTAAGADIVQPLQDKPWGLR-QYLVRDLEGHLWEFTRHLR  124 (137)
T ss_dssp             HHHHHHHHHTTCEEEEEEEEETTTEE-EEEEECSSSCEEEEEECC-
T ss_pred             HHHHHHHHHcCCeeccCccccCCCcE-EEEEECCCCCEEEEEEEcC
Confidence            99999999999999988887777754 6999999999999999764

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.64  E-value=1.9e-15  Score=140.53  Aligned_cols=161  Identities=19%  Similarity=0.218  Sum_probs=111.8

Q ss_pred             cccchhHHHHhhCccccccccCCCCCCCccccccccccccccccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeC--
Q 018138           69 FGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDI--  146 (360)
Q Consensus        69 ~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~--  146 (360)
                      .+++...+.+++|+.+|+........ ............+...+++|+||.|.|+|++++++||+++|||++......  
T Consensus        98 ~~~~~~~~~DPdG~~iel~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~  176 (297)
T 1lgt_A           98 GVTGLITFADPFGLPLEIYYGASEVF-EKPFLPGAAVSGFLTGEQGLGHFVRCVPDSDKALAFYTDVLGFQLSDVIDMKM  176 (297)
T ss_dssp             TCSEEEEEECTTSCEEEEEECCCBCT-TSCCCCSSSCSCBCCGGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEE
T ss_pred             CceeEEEEECCCCCEEEEEECccccc-cCCccCCCcccccccCccccceEEEecCCHHHHHHHHHHhcCCeeeeEEeccC
Confidence            45666778899999999976543210 001101111111124578999999999999999999999999999764221  


Q ss_pred             -CCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEECCHHHHH---HHHHHcCCeEecCCeecCCCCEEE
Q 018138          147 -PEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTV---DLVKAKGGKVTREPGPVKGGNTVI  222 (360)
Q Consensus       147 -~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~Dld~~~---~rL~~~G~~~~~~p~~~~~g~~~~  222 (360)
                       ++......|+..+..  ++.+.+...+      ...+++|++|.|+|++++.   ++ +++|+++..+|.+.+.+...+
T Consensus       177 ~~~~~~~~~~~~~~~~--~~~l~l~~~~------~~~~~~hiaf~v~d~~~~~~~~~~-~~~G~~~~~~p~~~~~g~~~~  247 (297)
T 1lgt_A          177 GPDVTVPAYFLHCNER--HHTLAIAAFP------LPKRIHHFMLEVASLDDVGFAFDR-VDADGLITSTLGRHTNDHMVS  247 (297)
T ss_dssp             ETTEEEEEEEEESSSB--SCSEEEECCC------CSSSEEEEEEEBSCHHHHHHHHHH-HHTTTCEEEEEEEESSSCCEE
T ss_pred             CCCccceEEEEEeCCC--cceEEEEcCC------CCCCceEEEEeCCCHHHHHHHHHH-HhCCCcccccCcccCCCCcEE
Confidence             111124567765432  2345555421      1347899999999987776   89 999999998888777665556


Q ss_pred             EEEECCCCCEEEEeecC
Q 018138          223 AFIEDPDGYKFELLERG  239 (360)
Q Consensus       223 ~~~~DPdG~~iEl~~~~  239 (360)
                      +||+|||||.|||++..
T Consensus       248 ~~~~DPdG~~iel~~~~  264 (297)
T 1lgt_A          248 FYASTPSGVEVEYGWSA  264 (297)
T ss_dssp             EEEECTTSCEEEEEECC
T ss_pred             EEEECCCCcEEEEecCC
Confidence            89999999999999865

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=99.64  E-value=6.4e-16  Score=130.89  Aligned_cols=119  Identities=20%  Similarity=0.226  Sum_probs=88.5

Q ss_pred             cccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCC--------CCCcCC
Q 018138          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV--------DKYDIG  181 (360)
Q Consensus       110 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~--------~~~~~g  181 (360)
                      +++.+|+||.|.|+|++++++||+++|||++..+...     ..+++..+.    ..+.+......        .....+
T Consensus         4 ~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~-----~~~~~~~g~----~~~~l~~~~~~~~~~~~~~~~~~~~   74 (160)
T 3r4q_A            4 KPPSAIMETALYADDLDAAEAFYRDVFGLEMVLKLPG-----QLVFFKCGR----QMLLLFDPQESSRADANNPIPRHGA   74 (160)
T ss_dssp             CCCSCEEEEEEECSCHHHHHHHHHHHSCCEEEEEETT-----TEEEEEETT----EEEEEECHHHHTCCCTTCCSCCCEE
T ss_pred             cccccccEEEEEeCCHHHHHHHHHHhcCCEEEEecCC-----cEEEEeCCC----EEEEEEecCCccCccccCCCCcCCC
Confidence            4578999999999999999999999999999875431     135666543    24555432111        111223


Q ss_pred             CcceEEEEEE---CCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecC
Q 018138          182 TGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (360)
Q Consensus       182 ~g~~hi~f~V---~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~  239 (360)
                      .|+.|++|.|   +|+++++++|+++|+++..++. ..+|. ..+|++|||||.|||++++
T Consensus        75 ~g~~hi~f~V~~~~dld~~~~~l~~~G~~~~~~~~-~~~g~-~~~~~~DPdG~~iel~~~~  133 (160)
T 3r4q_A           75 VGQGHFCFYADDKAEVDEWKTRFEALEIPVEHYHR-WPNGS-YSVYIRDPAGNSVEVGEGK  133 (160)
T ss_dssp             EEECEEEEEESSHHHHHHHHHHHHTTTCCCCEEEE-CTTSC-EEEEEECTTCCEEEEEEGG
T ss_pred             cceeEEEEEeCCHHHHHHHHHHHHHCCCEEecccc-ccCCc-EEEEEECCCCCEEEEEeCC
Confidence            4679999999   8899999999999999875433 23344 4699999999999999975

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=99.64  E-value=2e-15  Score=119.53  Aligned_cols=108  Identities=21%  Similarity=0.291  Sum_probs=83.0

Q ss_pred             ceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEE-
Q 018138          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV-  191 (360)
Q Consensus       113 ~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V-  191 (360)
                      ++|+||.|.|+|++++.+||+++|||++....+   ..  .+++..++   +..+.+.+....    ...+..|++|.| 
T Consensus         2 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~---~~--~~~~~~~~---~~~l~l~~~~~~----~~~~~~~~~~~v~   69 (113)
T 1xqa_A            2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRG---NA--FAVMRDND---GFILTLMKGKEV----QYPKTFHVGFPQE   69 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEET---TT--EEEEECTT---CCEEEEEECSSC----CCCTTCCEEEECS
T ss_pred             CeeEEEEEEeCCHHHHHHHHHHhCCCEEeccCC---Cc--EEEEEcCC---CcEEEEEeCCCC----CCCceeEEEEEcC
Confidence            579999999999999999999999999986431   22  36666543   245677654321    134688999999 


Q ss_pred             --CCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEe
Q 018138          192 --EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  236 (360)
Q Consensus       192 --~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~  236 (360)
                        +|+++++++|+++|+++. +|... + + ..++++|||||.|||+
T Consensus        70 ~~~d~~~~~~~l~~~G~~~~-~p~~~-~-~-~~~~~~DPdG~~iel~  112 (113)
T 1xqa_A           70 SEEQVDKINQRLKEDGFLVE-PPKHA-H-A-YTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             SHHHHHHHHHHHHHTTCCCC-CCEEC---C-EEEEEEETTTEEEEEE
T ss_pred             CHHHHHHHHHHHHHCCCEEe-cCcCC-C-c-EEEEEECCCCcEEEEe
Confidence              789999999999999975 45433 2 3 4699999999999986

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=99.63  E-value=2.9e-15  Score=124.93  Aligned_cols=119  Identities=21%  Similarity=0.357  Sum_probs=88.6

Q ss_pred             cccceeEEEEEEeCCHHHHHHHH---HHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCC---CCCCc-CCC
Q 018138          110 SDKRRMLHVVYRVGDLDKTIKFY---TECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYG---VDKYD-IGT  182 (360)
Q Consensus       110 ~~~~~l~HV~l~V~Dle~a~~FY---~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~---~~~~~-~g~  182 (360)
                      +++.++.||.|.|+|++++++||   +++|||++..+..  .  . ..|+. +    ...+++.....   ..+.. ...
T Consensus        16 ~~~~~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~--~--~-~~~~~-g----~~~l~l~~~~~~~~~~~~~~~~~   85 (146)
T 3ct8_A           16 YFQGMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWS--R--G-KSYKH-G----KTYLVFVQTEDRFQTPTFHRKRT   85 (146)
T ss_dssp             TTTTSCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEET--T--E-EEEEE-T----TEEEEEEECCGGGSCSCCCTTSS
T ss_pred             ccccceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEecC--C--C-ceEec-C----CeEEEEEEcCCCcccccccccCC
Confidence            46789999999999999999999   9999999986532  1  1 24554 3    24677766432   11111 235


Q ss_pred             cceEEEEEEC---CHHHHHHHHHHcCCeEec-CCeecCCC-CEEEEEEECCCCCEEEEeec
Q 018138          183 GFGHFGIAVE---DVAKTVDLVKAKGGKVTR-EPGPVKGG-NTVIAFIEDPDGYKFELLER  238 (360)
Q Consensus       183 g~~hi~f~V~---Dld~~~~rL~~~G~~~~~-~p~~~~~g-~~~~~~~~DPdG~~iEl~~~  238 (360)
                      ++.|++|.|+   |+++++++|+++|+++.. +|.....+ +.+.+||+|||||.|||+++
T Consensus        86 g~~hi~f~v~~~~dv~~~~~~l~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~p  146 (146)
T 3ct8_A           86 GLNHLAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYAVFCEDPNRIKVEIVAP  146 (146)
T ss_dssp             SCCEEEEECSCHHHHHHHHHHHHHHTCCBCCTTTTTCTTCTTCCEEEEECTTCCEEEEECC
T ss_pred             CceEEEEECCCHHHHHHHHHHHHHcCCccccCCCccccCCCceEEEEEECCCCCEEEEEeC
Confidence            7799999999   899999999999999887 45543332 23368999999999999863

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=99.63  E-value=6.3e-16  Score=130.19  Aligned_cols=106  Identities=16%  Similarity=0.182  Sum_probs=80.5

Q ss_pred             CCCceeceeeecCHHHHHHHhhhcceEEeeeccCC-----CccEEEEEEeCCc-------------c--cc---cCCCCe
Q 018138          242 PEPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPED-----KNAVLELTYNHGV-------------T--EY---DKGNGY  298 (360)
Q Consensus       242 ~~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~-----~~~~l~l~~~~~~-------------~--~~---~~g~g~  298 (360)
                      ..+|.|+.|.|+|+++|++||++    +|||+...     ...+..+....+.             .  ..   ..+.+.
T Consensus        24 ~Mri~~v~I~V~Dle~A~~FY~d----vLGf~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~   99 (155)
T 4g6x_A           24 AMRIHLTNVFVDDQAKAESFYTG----KLGFLVKADVPVGADRWLTVVSPEAPDGTQLLLEPSSHAAVTPFKEALVADGI   99 (155)
T ss_dssp             CCCCCEEEEEESCHHHHHHHHHH----TTCCEEEEEEEETTEEEEEEECTTCTTSCEEEEEECCSTTHHHHHHHHHHTTC
T ss_pred             ceEEEEEEEEeCCHHHHHHHHHH----HhCCEEEEeecCCCceEEEEeccCCCcceEEEeccCCCccccccccccccCCc
Confidence            45899999999999999999999    99997421     0111111111000             0  00   113467


Q ss_pred             eEEEEEeCCHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCc
Q 018138          299 AQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  353 (360)
Q Consensus       299 ~hiaf~V~Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  353 (360)
                      .|++|.|+|+++++++|+++|+++..+|.+.++  ++.+||+|||||+|||+|..
T Consensus       100 ~~l~f~VdDvda~~~~l~~~Gv~~~~~p~~~~~--g~~~~f~DPdGn~iel~q~~  152 (155)
T 4g6x_A          100 PAASFAVDDIAAEYERLSALGVRFTQEPTDMGP--VVTAILDDTCGNLIQLMQIA  152 (155)
T ss_dssp             CSEEEEESCHHHHHHHHHHTTCCEEEEEEECSS--CEEEEEECSSSCEEEEEEC-
T ss_pred             eEEEeeechhhhhhhHHhcCCcEEeeCCEEcCC--eEEEEEECCCCCEEEEEEEC
Confidence            899999999999999999999999999988777  68999999999999999864

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.63  E-value=1.5e-15  Score=141.80  Aligned_cols=161  Identities=16%  Similarity=0.166  Sum_probs=108.4

Q ss_pred             cccchhHHHHhhCccccccccCCCCCCCccccccccccc-cccccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCC
Q 018138           69 FGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDW-VKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIP  147 (360)
Q Consensus        69 ~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~  147 (360)
                      ++++...+.+|+|+.+|+........ .....+...+.. +....++|+||.|.|+|++++++|| ++|||++......+
T Consensus       104 ~~~~~~~~~DPdG~~iel~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~hv~l~v~D~~~a~~FY-~~lG~~~~~~~~~~  181 (302)
T 2ehz_A          104 MVLGLMKTEDPGGNPTEIFWGPRIDM-SNPFHPGRPLHGKFVTGDQGLGHCIVRQTDVAEAHKFY-SLLGFRGDVEYRIP  181 (302)
T ss_dssp             TEEEEEEEECTTSCEEEEEEEECBCT-TSCCCCSSCCSSCBCCGGGCSCEEEECCSCHHHHHHHH-HHTTCBCCEEEEEE
T ss_pred             cceEEEEEECCCCCEEEEEECCCccC-CCCccCCCCcccceecCCCccceEEEEcCCHHHHHHHH-HhcCCeeeeEEecc
Confidence            34556678899999999976532110 001111101100 1246789999999999999999999 99999987532211


Q ss_pred             --CC-CeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEECCHHH---HHHHHHHcCCeEecCCeecCCCCEE
Q 018138          148 --ED-RYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAK---TVDLVKAKGGKVTREPGPVKGGNTV  221 (360)
Q Consensus       148 --~~-~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~Dld~---~~~rL~~~G~~~~~~p~~~~~g~~~  221 (360)
                        .+ .....|+..+..  ++.+.+....      ...+++|++|.|+|+++   ++++|+++|+++..+|.....+...
T Consensus       182 ~~~g~~~~~~~~~~~~~--~~~~~~~~~~------~~~~~~hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~  253 (302)
T 2ehz_A          182 LPNGMTAELSFMHCNAR--DHSIAFGAMP------AAKRLNHLMLEYTHMEDLGYTHQQFVKNEIDIALQLGIHANDKAL  253 (302)
T ss_dssp             CTTSCEEEEEEEBSSSB--SCSEEECSCC------CSSSEEEEEEEESSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCE
T ss_pred             CCCCcceEEEEEEeCCC--CcEEEEecCC------CCCceeEEEEEcCCHHHHHHHHHHHHHCCCcEEeCCcccCCCCce
Confidence              11 234567765432  2334443221      12468999999998664   6789999999998888777665555


Q ss_pred             EEEEECCCCCEEEEeecC
Q 018138          222 IAFIEDPDGYKFELLERG  239 (360)
Q Consensus       222 ~~~~~DPdG~~iEl~~~~  239 (360)
                      ++||+|||||.|||+...
T Consensus       254 ~~~~~DPdG~~iEl~~~~  271 (302)
T 2ehz_A          254 TFYGATPSGWLIEPGWRG  271 (302)
T ss_dssp             EEEEECTTSSEEEEEECC
T ss_pred             EEEEECCCCcEEEEEECc
Confidence            799999999999999864

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=99.62  E-value=2.7e-15  Score=122.07  Aligned_cols=108  Identities=44%  Similarity=0.764  Sum_probs=80.9

Q ss_pred             CceeceeeecCHHHHHHHhhhcceEEeeeccCCC--------------------ccEEEEEEeCCcccccCCCCeeEEEE
Q 018138          244 PLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK--------------------NAVLELTYNHGVTEYDKGNGYAQIAI  303 (360)
Q Consensus       244 ~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~--------------------~~~l~l~~~~~~~~~~~g~g~~hiaf  303 (360)
                      +++|+.|.|+|++++.+||++    +|||+....                    ...+++....+....+.+.+..|++|
T Consensus         2 ~l~hv~l~v~D~~~a~~FY~~----~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~   77 (135)
T 1f9z_A            2 RLLHTMLRVGDLQRSIDFYTK----VLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIAL   77 (135)
T ss_dssp             CEEEEEEECSCHHHHHHHHHH----TTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEE
T ss_pred             cceEEEEEeCCHHHHHHHHHh----ccCcEEEEecccCCCceEEEEEecCCCCCCcEEEEEEcCCCCcccCCCCccEEEE
Confidence            589999999999999999999    888864321                    01122222111111223457889999


Q ss_pred             EeCCHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCccc
Q 018138          304 GTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDF  355 (360)
Q Consensus       304 ~V~Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  355 (360)
                      .|+|+++++++++++|+++..+|...+.+..+.++|+|||||.|||++....
T Consensus        78 ~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~~  129 (135)
T 1f9z_A           78 SVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDA  129 (135)
T ss_dssp             ECSCHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC---
T ss_pred             EeCCHHHHHHHHHHCCCEEecCCccCCCCceeEEEEECCCCCEEEEEecCCC
Confidence            9999999999999999999988877766545789999999999999997643

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=99.61  E-value=3.4e-14  Score=126.40  Aligned_cols=204  Identities=14%  Similarity=0.096  Sum_probs=135.9

Q ss_pred             eeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEE---EEE
Q 018138          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHF---GIA  190 (360)
Q Consensus       114 ~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi---~f~  190 (360)
                      ...+.+|+|.|++++.+||+++|||++..+..      ..+.|+.+..  .-.+.+-+.+.... ....|+.|+   ++.
T Consensus        10 ~~~~p~LrV~nr~~~~~FY~~vlG~kll~ee~------~~a~lg~~~~--~~~L~lEEsp~~~~-~~~~Glkh~a~i~i~   80 (244)
T 3e0r_A           10 VRIIPTLKANNRKLNETFYIETLGMKALLEES------AFLSLGDQTG--LEKLVLEEAPSMRT-RKVEGRKKLARLIVK   80 (244)
T ss_dssp             EEEEEEEEESSHHHHHHHHTTTTCCEEEEECS------SEEEEECTTC--CEEEEEEECCTTTC-BCCCSSCSEEEEEEE
T ss_pred             EEEeeEEEECCHHHHHHHHHhccCcEEeeccC------cEEEeecCCC--cceEEEEeCCCccc-ccccccceeeeEEEE
Confidence            35578899999999999999999999987643      2477775333  23344444332211 224577777   599


Q ss_pred             ECCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCCC----------------------CCCceec
Q 018138          191 VEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT----------------------PEPLCQV  248 (360)
Q Consensus       191 V~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~~----------------------~~~i~hv  248 (360)
                      |++-.++..-|.. +.++.. .+...+|  +.+|+.||+||.|||+...+.                      ...+ ||
T Consensus        81 vp~~~el~~lL~~-~~~~~~-~~~gdhg--yA~yl~dPEGn~ieiyae~d~~~l~~v~~~~~l~~~~~~~gLs~fti-~I  155 (244)
T 3e0r_A           81 VENPLEIEGILSK-TDSIHR-LYKGQNG--YAFEIFSPEDDLILIHAEDDIASLVEVGEKPEFQTDLASISLSKFEI-SM  155 (244)
T ss_dssp             ESSHHHHHHHHTT-CSCCSE-EEECSSS--EEEEEECTTCCEEEEECCSCGGGCEECSSCCCCCCCCSCCCCSSEEE-EE
T ss_pred             cCCHHHHHHHHhc-cccccc-ccccCCc--EEEEEECCCCCeEEEEEcCCHHHhhcccchhhccccccccCCCCcEE-EE
Confidence            9987665554443 544321 1233344  369999999999999965431                      1257 99


Q ss_pred             eeeecCHHHHHHHhhhcceEEeeeccCCCccEEEEEEeCCcc-cc--cCCCCeeEEEEEeC--CHHHHHHHHHHcCCeEe
Q 018138          249 MLRVGDLDRAINFYKKYTIAVMGYGPEDKNAVLELTYNHGVT-EY--DKGNGYAQIAIGTD--DVYKTAEAIKLSGGKIT  323 (360)
Q Consensus       249 ~L~V~D~e~a~~FY~~~~~~~lG~~~~~~~~~l~l~~~~~~~-~~--~~g~g~~hiaf~V~--Dl~~~~~~l~~~G~~i~  323 (360)
                      +|+|.|.+++  ||++     +|+.     ..+.+....|.. ..  +...|+-.+-|.|+  |+.++.+++++.|.-+.
T Consensus       156 ~LnV~d~~~s--Fy~~-----~~~~-----~~~~F~~a~G~dl~~~~~~t~gLe~l~~~v~~~dl~~l~~~L~~~g~~id  223 (244)
T 3e0r_A          156 ELHLPTDIES--FLES-----SEIG-----ASLDFIPAQGQDLTVDNTVTWDLSMLKFLVNELDIASLRQKFESTEYFIP  223 (244)
T ss_dssp             EEEECTTCCC--SCCH-----HHHT-----TTEEEEECCCTTTTCCTTSBSSEEEEEEEESSCCHHHHHHHTTTSCEECC
T ss_pred             EEEcCchHHH--Hhhc-----cCCc-----ccEEEEcccCCCCCCCCCCccCceEEEEEeCHHHHHHHHHHHHhCCceEc
Confidence            9999999988  9985     3442     123344333332 11  12247778888884  68899999998876432


Q ss_pred             eCCcccCCCCcEEEEEECCCCCeEEEEc
Q 018138          324 REPGPLPGINTKITACLDPDGWKSVFVD  351 (360)
Q Consensus       324 ~~p~~~~~~~~~~~~~~DPdG~~iel~~  351 (360)
                      .        ...++.+.||+|+.|+|.+
T Consensus       224 k--------k~~~l~~~DpsgIeiwF~~  243 (244)
T 3e0r_A          224 K--------SEKFFLGKDRNNVELWFEE  243 (244)
T ss_dssp             T--------TCCEEEEECTTSCEEEEEE
T ss_pred             c--------cCCEEEEECCCCCEEEEEE
Confidence            2        1567899999999999875

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.61  E-value=2.6e-15  Score=140.30  Aligned_cols=161  Identities=16%  Similarity=0.213  Sum_probs=108.4

Q ss_pred             cccchhHHHHhhCccccccccCCCCCCCccccccccccc-cccccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCC
Q 018138           69 FGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDW-VKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIP  147 (360)
Q Consensus        69 ~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~  147 (360)
                      .+++...+.+++|+.+|+........ .....+...+.. +...+++|+||.|.|+|++++++|| ++|||++......+
T Consensus       101 ~~~~~~~~~DPdG~~iel~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~hv~l~v~D~~~s~~FY-~vLG~~~~~~~~~~  178 (305)
T 2wl9_A          101 RVLGLVKLHDPGGNPTEIFYGPQVDT-SSPFHPGRPMFGKFVTEGQGLGHIIIREDDVEEATRFY-RLLGLEGAVEYKFA  178 (305)
T ss_dssp             TEEEEEEEECTTCCEEEEEEEECBCT-TSCCCCSSCCSSCBCCTTTCSCEEEECCSCHHHHHHHH-HHHTCEEEECBCEE
T ss_pred             CcEEEEEEECCCCCEEEEEECCCccC-CCCcCCCCCcccceecCCceeeeEEEECCCHHHHHHHH-HHcCCeeeeeEecc
Confidence            33455667889999999966521110 001111100000 1246789999999999999999999 99999997532211


Q ss_pred             --CC-CeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEECC---HHHHHHHHHHcCCeEecCCeecCCCCEE
Q 018138          148 --ED-RYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTV  221 (360)
Q Consensus       148 --~~-~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~D---ld~~~~rL~~~G~~~~~~p~~~~~g~~~  221 (360)
                        .+ .....|+..+..  ++.+.+....      ...+++|++|.|+|   +++++++|+++|+++..+|.....+...
T Consensus       179 ~~~g~~~~~~~~~~~~~--~~~~~~~~~~------~~~~~~hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~  250 (305)
T 2wl9_A          179 LPNGAVGTPVFMHCNDR--HHSLAFGVGP------MDKRINHLMIEYTHLDDLGYAHDLVRQQKIDVTLQIGKHSNDEAL  250 (305)
T ss_dssp             CTTSCEECCEEEESSSS--SCSEEECCSC------CSSSEEEEEEEESSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCE
T ss_pred             cCCCccceEEEEEcCCC--ceEEEEecCC------CCCCceEEEEEcCCHHHHHHHHHHHHHcCCCccccCcccCCCCcE
Confidence              11 223467765543  2334443321      12478999999998   6678899999999998888777666555


Q ss_pred             EEEEECCCCCEEEEeecC
Q 018138          222 IAFIEDPDGYKFELLERG  239 (360)
Q Consensus       222 ~~~~~DPdG~~iEl~~~~  239 (360)
                      ++||+|||||.|||+...
T Consensus       251 ~~y~~DPdG~~iEl~~~~  268 (305)
T 2wl9_A          251 TFYCANPSGWLWEPGWGS  268 (305)
T ss_dssp             EEEEECTTSSEEEEEECC
T ss_pred             EEEEECCCCCEEEEEeCC
Confidence            789999999999999865

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A

Probab=99.60  E-value=5.9e-15  Score=118.92  Aligned_cols=109  Identities=14%  Similarity=0.058  Sum_probs=83.9

Q ss_pred             eeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEECC
Q 018138          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVED  193 (360)
Q Consensus       114 ~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~D  193 (360)
                      +-.|+.|.|+|++++++||+++|||++...    ...  .+++..+    ...+.+......   . ..+..|++|.|+|
T Consensus         5 ~~~~~~l~v~D~~~a~~FY~~~LG~~~~~~----~~~--~~~~~~~----~~~l~l~~~~~~---~-~~~~~~~~~~v~d   70 (122)
T 1qto_A            5 LGAVPVLTAVDVPANVSFWVDTLGFEKDFG----DRD--FAGVRRG----DIRLHISRTEHQ---I-VADNTSAWIEVTD   70 (122)
T ss_dssp             CCCCCEEEESSHHHHHHHHHHTTCCEEEEE----CSS--EEEEEET----TEEEEEEECSCH---H-HHTTCEEEEEESC
T ss_pred             cceeEEEEcCCHHHHHHHHHhccCcEEeeC----CCC--EEEEEEC----CEEEEEEcCCCC---C-CCCceEEEEEECC
Confidence            344678999999999999999999999854    122  3556554    235666543221   1 1134699999999


Q ss_pred             HHHHHHHHHHc------CC--eEecCCeecCCCCEEEEEEECCCCCEEEEeec
Q 018138          194 VAKTVDLVKAK------GG--KVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (360)
Q Consensus       194 ld~~~~rL~~~------G~--~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~  238 (360)
                      +++++++|+++      |+  ++..+|...++| + .++++|||||.|||+++
T Consensus        71 vd~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~g-~-~~~~~DPdG~~iel~~~  121 (122)
T 1qto_A           71 PDALHEEWARAVSTDYADTSGPAMTPVGESPAG-R-EFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             HHHHHHHHTTTSCSCTTCTTSCEECCCEEETTE-E-EEEEECTTSCEEEEEEC
T ss_pred             HHHHHHHHHhhccccccCccccccCCCcCCCCC-c-EEEEECCCCCEEEEecC
Confidence            99999999999      99  888888877776 4 68999999999999985

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=99.60  E-value=2.3e-14  Score=115.95  Aligned_cols=112  Identities=22%  Similarity=0.300  Sum_probs=85.7

Q ss_pred             eeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEECC
Q 018138          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVED  193 (360)
Q Consensus       114 ~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~D  193 (360)
                      ...|+.|.|+|++++++||++ |||++..+    +..  .+++..+.    ..+++......   ....+..|++|.|+|
T Consensus         3 ~~~~~~l~v~D~~~a~~FY~~-LG~~~~~~----~~~--~~~~~~~~----~~l~l~~~~~~---~~~~~~~~~~~~v~d   68 (126)
T 1ecs_A            3 DQATPNLPSRDFDSTAAFYER-LGFGIVFR----DAG--WMILQRGD----LMLEFFAHPGL---DPLASWFSCCLRLDD   68 (126)
T ss_dssp             CEEEEEEEESCHHHHHHHHHT-TTCEEEEE----CSS--EEEEEETT----EEEEEEECTTC---CGGGCCCEEEEEESC
T ss_pred             ccEEEEEEeCCHHHHHHHHHH-CCCEEEec----CCC--EEEEEeCC----EEEEEEeCCCC---CCCCcceEEEEEECC
Confidence            356899999999999999998 99999864    122  35566542    35666653321   112367899999999


Q ss_pred             HHHHHHHHHHcCCeE-------ecCCeecCCCCEEEEEEECCCCCEEEEeecCC
Q 018138          194 VAKTVDLVKAKGGKV-------TREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (360)
Q Consensus       194 ld~~~~rL~~~G~~~-------~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~  240 (360)
                      +++++++|+++|+++       ..+|...++|.+ .++++|||||.|||++...
T Consensus        69 v~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~~~~~  121 (126)
T 1ecs_A           69 LAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGT-MAALVDPDGTLLRLIQNEL  121 (126)
T ss_dssp             HHHHHHHHHHTTCCBCSSSSSEEEEEEECTTSSE-EEEEECTTSCEEEEEECCC
T ss_pred             HHHHHHHHHHCCCccccccCccccCCcccCcccE-EEEEECCCCCEEEEecchh
Confidence            999999999999994       667776676654 6899999999999998764

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=99.60  E-value=1.1e-14  Score=120.13  Aligned_cols=117  Identities=16%  Similarity=0.121  Sum_probs=85.0

Q ss_pred             eeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEec-----CCC--CCCcCCCcceE
Q 018138          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN-----YGV--DKYDIGTGFGH  186 (360)
Q Consensus       114 ~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~-----~~~--~~~~~g~g~~h  186 (360)
                      ++.||.|.|+|++++++||+++|||++..+..  ...  .+++..+.    ..+.+...     ...  .....+.+ .|
T Consensus         8 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~~~--~~~~~~~~----~~l~l~~~~~~~~~~~~~~~~~~~~~-~~   78 (141)
T 2rbb_A            8 DLSYVNIFTRDIVAMSAFYQQVFGFQEIESIR--SPI--FRGLDTGK----SCIGFNAHEAYELMQLAQFSETSGIK-FL   78 (141)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEECGGGC--BTT--EEEEECSS----SEEEEECTHHHHHTTCGGGCCCBSCC-EE
T ss_pred             cccEEEEEECCHHHHHHHHHHhcCCeeecccC--CCc--eEEeecCC----EEEEEcCccccccccccccCCCCCCe-EE
Confidence            89999999999999999999999999964322  122  24454432    23444321     010  00112334 49


Q ss_pred             EEEEEC---CHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCC
Q 018138          187 FGIAVE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (360)
Q Consensus       187 i~f~V~---Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~  240 (360)
                      ++|.|+   |+++++++|+++|+++..+|...++|. ..+||+|||||.|||++...
T Consensus        79 ~~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~-~~~~~~DPdG~~iel~~~~~  134 (141)
T 2rbb_A           79 LNFDVDTKEAVDKLVPVAIAAGATLIKAPYETYYHW-YQAVLLDPERNVFRINNVLE  134 (141)
T ss_dssp             EEEECSCHHHHHHHHHHHHHTTCEEEEEEEECTTSE-EEEEEECTTSCEEEEEEEC-
T ss_pred             EEEEcCCHHHHHHHHHHHHHcCCeEecCccccCCcc-EEEEEECCCCCEEEEEEccc
Confidence            999999   599999999999999988887766664 46999999999999998664

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.59  E-value=9.8e-15  Score=135.32  Aligned_cols=150  Identities=17%  Similarity=0.208  Sum_probs=104.0

Q ss_pred             ccchhHHHHhhCccccccccCCCCCCCccccccccccccccccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCC
Q 018138           70 GAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPED  149 (360)
Q Consensus        70 g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~  149 (360)
                      +++...+.+++|+.+++.........           ........+.|+.|.|+|++++++||+++|||++......+..
T Consensus       131 ~g~~~~~~DP~G~~i~l~~~~~~~~~-----------~~~~~~~~~~~~~l~v~D~~~a~~FY~~vlG~~~~~~~~~~~~  199 (282)
T 3oxh_A          131 AGRMSFITDPTGAAVGLWQANRHIGA-----------TLVNETGTLIWNELLTDKPDLALAFYEAVVGLTHSSMEIAAGQ  199 (282)
T ss_dssp             TEEEEEEECTTCCEEEEEEESSCCSC-----------SBCSSTTSEEEEEEECSCHHHHHHHHHHHHCCEEEEC------
T ss_pred             CeEEEEEECCCCCEEEEEEccccCCc-----------cccCCCCccEEEEEEcCCHHHHHHHHHHHhCCeeeeccCCCCc
Confidence            45667888999999998654432110           0112346788999999999999999999999998754211122


Q ss_pred             CeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEECCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCC
Q 018138          150 RYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPD  229 (360)
Q Consensus       150 ~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPd  229 (360)
                      .  .+++..+..  . ...+....    .....+..|++|.|+|+++++++++++|+++..+|...++++ ++++++||+
T Consensus       200 ~--~~~~~~~~~--~-~~~~~~~~----~~~~~~~~~~~~~v~dvd~~~~~~~~~G~~~~~~p~~~~~~~-~~~~~~DPd  269 (282)
T 3oxh_A          200 N--YRVLKAGDA--E-VGGCMEPP----MPGVPNHWHVYFAVDDADATAAKAAAAGGQVIAEPADIPSVG-RFAVLSDPQ  269 (282)
T ss_dssp             ---CEEEEETTE--E-EEEEECCS----STTCCSEEEEEEECSCHHHHHHHHHHTTCEEEEEEEEETTTE-EEEEEECTT
T ss_pred             c--eEEEEcCCc--c-EeeecCCC----CCCCCCeEEEEEEeCCHHHHHHHHHHcCCEEecCCeEcCCCe-EEEEEECCC
Confidence            2  244444321  1 12222221    112235678999999999999999999999998888887654 469999999


Q ss_pred             CCEEEEeecCC
Q 018138          230 GYKFELLERGP  240 (360)
Q Consensus       230 G~~iEl~~~~~  240 (360)
                      ||.|+|++..+
T Consensus       270 Gn~~~l~~~~~  280 (282)
T 3oxh_A          270 GAIFSVLKAAP  280 (282)
T ss_dssp             SCEEEEEEEC-
T ss_pred             CCEEEEEecCC
Confidence            99999999764

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=99.59  E-value=8.6e-16  Score=126.55  Aligned_cols=117  Identities=17%  Similarity=0.168  Sum_probs=85.0

Q ss_pred             ccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEE-----ec---CCCCCCcCCC
Q 018138          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELT-----YN---YGVDKYDIGT  182 (360)
Q Consensus       111 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~-----~~---~~~~~~~~g~  182 (360)
                      .+++++|+.|.|+|++++++||+++|||++....  +  .  .+.+..     ...+...     ..   ........+.
T Consensus         5 ~~~~l~~v~l~v~D~~~a~~FY~~~LG~~~~~~~--~--~--~~~~~~-----g~~l~~~~~~~~~~~~~~~~~~~~~~~   73 (141)
T 2qnt_A            5 QGMRFVNPIPFVRDINRSKSFYRDRLGLKILEDF--G--S--FVLFET-----GFAIHEGRSLEETIWRTSSDAQEAYGR   73 (141)
T ss_dssp             CSCCCCCCCCEESCHHHHHHHHHHTTCCCEEEEC--S--S--EEEETT-----SCEEEEHHHHHHHHHSCCC--CCCSCC
T ss_pred             cccccceEEEEECCHHHHHHHHHHhcCCEEEEEc--C--C--cEEEec-----cceeccCchhhhhccccCCccccccCC
Confidence            4678999999999999999999999999997542  1  1  133331     1233310     10   1111112345


Q ss_pred             cceEEEEEECCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCC
Q 018138          183 GFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (360)
Q Consensus       183 g~~hi~f~V~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~  240 (360)
                      +..|++|.|+|+++++++|++ |+++..+|...++|.+ .++++|||||.|||++..+
T Consensus        74 ~~~~~~~~v~dv~~~~~~l~~-G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~~~~~  129 (141)
T 2qnt_A           74 RNMLLYFEHADVDAAFQDIAP-HVELIHPLERQAWGQR-VFRFYDPDGHAIEVGESLS  129 (141)
T ss_dssp             SSCEEEEEESCHHHHHC-CGG-GSCEEEEEEECTTSCE-EEEEECTTCCEEEEEECC-
T ss_pred             CceEEEEEeCcHHHHHHHHHc-CCccccCCccCCCCCE-EEEEECCCCCEEEEEecch
Confidence            788999999999999999999 9998888887776644 6899999999999999764

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0

Probab=99.59  E-value=2e-14  Score=117.83  Aligned_cols=118  Identities=13%  Similarity=0.128  Sum_probs=83.6

Q ss_pred             eeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEECC
Q 018138          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVED  193 (360)
Q Consensus       114 ~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~D  193 (360)
                      .-.+..|.|+|++++++||+++|||++..+..    .  .+++..+.    ..+.+...........+.+..|++|.|+|
T Consensus         7 ~~~~~~l~v~D~~~a~~FY~~~LG~~~~~~~~----~--~~~l~~~~----~~l~l~~~~~~~~~~~~~~~~~l~~~v~d   76 (134)
T 3fcd_A            7 HQITPFLHIPDMQEALTLFCDTLGFELKYRHS----N--YAYLELSG----CGLRLLEEPARKIIPDGIARVAICIDVSD   76 (134)
T ss_dssp             CEEEEEEEESCHHHHHHHHTTTTCCEEEEEET----T--EEEEEETT----EEEEEEECCCC---------EEEEEECSC
T ss_pred             hcceeEEEECCHHHHHHHHHhccCcEEEEeCC----C--eEEEEECC----EEEEEEeCCCCCcCCCCCceEEEEEEeCC
Confidence            34456799999999999999999999986532    1  36666542    35666654332111122244799999999


Q ss_pred             HHHHHHHHHHcC----CeEecCCeecCCCCEEEEEEECCCCCEEEEeecCCCC
Q 018138          194 VAKTVDLVKAKG----GKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTP  242 (360)
Q Consensus       194 ld~~~~rL~~~G----~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~~~  242 (360)
                      +++++++|+++|    +++..+|...++|.+ .++|+|||||.|||.+.....
T Consensus        77 v~~~~~~l~~~g~~~g~~i~~~~~~~~~g~~-~~~~~DPdG~~iel~~~~~~~  128 (134)
T 3fcd_A           77 IDSLHTKLSPALENLPADQVEPLKNMPYGQR-EFQVRMPDGDWLNFTAPLAEG  128 (134)
T ss_dssp             HHHHHHHHHHHHTTSCGGGEEEEEECTTSEE-EEEEECTTSCEEEEEEECCTT
T ss_pred             HHHHHHHHHhcCCccCCccccCCcccCCCcE-EEEEECCCCCEEEEEEccccc
Confidence            999999999655    456666766666644 689999999999999987643

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.58  E-value=3.1e-14  Score=135.16  Aligned_cols=160  Identities=20%  Similarity=0.164  Sum_probs=106.0

Q ss_pred             ccccchhHHHHhhCccccccccCCCCCCC-ccccccccccccccccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeC
Q 018138           68 FFGAKALKLLRAEGSTIEASTSGNMAPTS-NTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDI  146 (360)
Q Consensus        68 ~~g~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~  146 (360)
                      .+|.+...+.+++|+.+|+.......+.. .+..+ .... ..+.+++|+||.|.|+|++++++||+++|||++..... 
T Consensus       135 ~~G~~~~~f~DPdG~~iel~~~~~~~~~~~~p~~~-~~~~-~~~~~~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~-  211 (338)
T 1zsw_A          135 YANRPALQFEDAEGLRLVLLVSNGEKVEHWETWEK-SEVP-AKHQIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRND-  211 (338)
T ss_dssp             ETTEEEEEEECTTCCEEEEEECTTCCCTTCCCCTT-CSSC-GGGSCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS-
T ss_pred             cCCcEEEEEECCCCCEEEEEEcCCccccccCcCcC-CCCC-ccccCceEEEEEEEECCHHHHHHHHHHhcCCEEEeecC-
Confidence            46767777889999999986654321100 00000 0010 24568999999999999999999999999999986532 


Q ss_pred             CCCCeEEEEEeeCCCCc-eEEEEEEecCCCCCCcCCCcceEEEEEEC---CHHHHHHHHHHcCCeEecCCeecCCCCEEE
Q 018138          147 PEDRYTNAFLGYGPEDS-HFVVELTYNYGVDKYDIGTGFGHFGIAVE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVI  222 (360)
Q Consensus       147 ~~~~~~~~~l~~g~~~~-~~~lel~~~~~~~~~~~g~g~~hi~f~V~---Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~  222 (360)
                         .+  +.+..++.+. ...+.+.. ..........+++|++|.|+   |+++++++|+++|+++. +|...  +....
T Consensus       212 ---~~--~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~hiaf~v~~~~dv~~~~~~l~~~G~~~~-~~~~~--~~~~~  282 (338)
T 1zsw_A          212 ---QE--AIFQSIKGEAFGEIVVKYL-DGPTEKPGRGSIHHLAIRVKNDAELAYWEEQVKQRGFHSS-GIIDR--FYFKS  282 (338)
T ss_dssp             ---SE--EEEESSTTCSTTCEEEEEC-CSSBCBCCBTCEEEEEEEESSHHHHHHHHHHHHHTTCCCC-CCEEC--SSEEE
T ss_pred             ---Ce--EEEEecCCCCceEEEEecc-CCCCCCCCCCceEEEEEEeCCHHHHHHHHHHHHHCCCcee-eeeec--CceEE
Confidence               22  3344432111 11233322 11111111236799999998   69999999999999985 55544  33457


Q ss_pred             EEEECCCCCEEEEeecC
Q 018138          223 AFIEDPDGYKFELLERG  239 (360)
Q Consensus       223 ~~~~DPdG~~iEl~~~~  239 (360)
                      +||+|||||.|||++..
T Consensus       283 ~~~~DPdG~~iEl~~~~  299 (338)
T 1zsw_A          283 LYFRESNGILFEIATDG  299 (338)
T ss_dssp             EEEECTTCCEEEEEEEE
T ss_pred             EEEECCCCCEEEEEEcC
Confidence            99999999999999865

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.57  E-value=3.8e-14  Score=134.35  Aligned_cols=140  Identities=21%  Similarity=0.365  Sum_probs=103.2

Q ss_pred             hHHHHhhCccccccccCCCCCCCccccccccccccccccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEE
Q 018138           74 LKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTN  153 (360)
Q Consensus        74 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~  153 (360)
                      ..+.+++|+.+|+.....                  .....+.||.|.|+|++++++||+++|||++..+....  .  .
T Consensus       137 ~~~~DPdG~~iel~~~~~------------------~~~~~i~hv~L~v~Dl~~a~~FY~~vLG~~~~~~~~~~--~--~  194 (330)
T 3zi1_A          137 FETEAPGGYKFYLQNRSL------------------PQSDPVLKVTLAVSDLQKSLNYWCNLLGMKIYENDEEK--Q--R  194 (330)
T ss_dssp             EEEECTTSCEEEEESSCC------------------TTSCSEEEEEEEESCHHHHHHHHHHTTCCEEEEEETTT--T--E
T ss_pred             EEEECCCCCEEEEEecCC------------------CCCCceeEEEEECCCHHHHHHHHHHhcCCEEEeeccCC--c--E
Confidence            445778899999854331                  01234789999999999999999999999998765432  1  4


Q ss_pred             EEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEEC--CHHHHHHHHHHcCCeEecCCeec--C-CCCEEEEEEECC
Q 018138          154 AFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVE--DVAKTVDLVKAKGGKVTREPGPV--K-GGNTVIAFIEDP  228 (360)
Q Consensus       154 ~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~--Dld~~~~rL~~~G~~~~~~p~~~--~-~g~~~~~~~~DP  228 (360)
                      +|+.+++.  .+.+++.....  ....+.++.|++|.|+  |+++++++|+++|+++..+|...  + ..+.+.+||+||
T Consensus       195 ~~l~~g~~--~~~l~l~~~~~--~~~~~~~~~hiaf~v~~~dld~~~~rl~~~G~~i~~~~~~~~~pg~~g~~~~~f~DP  270 (330)
T 3zi1_A          195 ALLGYADN--QCKLELQGVKG--GVDHAAAFGRIAFSCPQKELPDLEDLMKRENQKILTPLVSLDTPGKATVQVVILADP  270 (330)
T ss_dssp             EEEESSTT--SCEEEEEECSS--CCCCBTTCCEEEEEECGGGHHHHHHHHHHTTCEEEEEEEEECCTTSCCEEEEEEECT
T ss_pred             EEEEeCCc--eEEEEECCCCC--CCCCCCCCceEEEEEEcccHHHHHHHHHHcCCcEecCceecccCCCCceEEEEEECC
Confidence            77877654  45677765432  1223457889999995  79999999999999988776653  1 113357999999


Q ss_pred             CCCEEEEeecC
Q 018138          229 DGYKFELLERG  239 (360)
Q Consensus       229 dG~~iEl~~~~  239 (360)
                      |||.|||++..
T Consensus       271 dG~~iEl~~~~  281 (330)
T 3zi1_A          271 DGHEICFVGDE  281 (330)
T ss_dssp             TCCEEEEEEHH
T ss_pred             CCCEEEEEEec
Confidence            99999999864

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=99.57  E-value=8.2e-15  Score=126.82  Aligned_cols=109  Identities=31%  Similarity=0.497  Sum_probs=85.1

Q ss_pred             CCCceeceeeecCHHHHHHHhhhcceEEeeeccCCC-----------------------------------ccEEEEEEe
Q 018138          242 PEPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK-----------------------------------NAVLELTYN  286 (360)
Q Consensus       242 ~~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~-----------------------------------~~~l~l~~~  286 (360)
                      ..+++|+.|.|+|++++++||++    +|||+....                                   ...+++...
T Consensus        32 ~~~l~Hv~l~v~D~~~a~~FY~~----~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~  107 (187)
T 3vw9_A           32 DFLLQQTMLRVKDPKKSLDFYTR----VLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHN  107 (187)
T ss_dssp             TCEEEEEEEECSCHHHHHHHHHH----TTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTCSSEEEEEEE
T ss_pred             eeEEEEEEEEeCCHHHHHHHHHH----hcCcEEeeccccCCCceeEEEecCCCcccccccccchhhhcccCCceEEEEEe
Confidence            35899999999999999999998    888874221                                   134566544


Q ss_pred             CCccc-----ccCC----CCeeEEEEEeCCHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCcccc
Q 018138          287 HGVTE-----YDKG----NGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFL  356 (360)
Q Consensus       287 ~~~~~-----~~~g----~g~~hiaf~V~Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~  356 (360)
                      .+...     +..+    .+++|++|.|+|+++++++|+++|+++..+|...+.  ++++||+|||||.|||++.....
T Consensus       108 ~~~~~~~~~~~~~g~~~~~g~~hl~f~v~dv~~~~~~l~~~G~~~~~~~~~~~~--~~~~~~~DPdG~~iel~~~~~~~  184 (187)
T 3vw9_A          108 WGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKM--KGLAFIQDPDGYWIEILNPNKMA  184 (187)
T ss_dssp             TTGGGCTTCCCCCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSS--TTCEEEECTTCCEEEEECGGGSG
T ss_pred             cCCCCCCccccccCCCCCCceeEEEEEECCHHHHHHHHHHCCCeEeeCCccCCc--ceEEEEECCCCCEEEEEEccccc
Confidence            33221     1122    388999999999999999999999999998876555  45789999999999999987554

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=99.57  E-value=9.1e-15  Score=121.92  Aligned_cols=120  Identities=20%  Similarity=0.186  Sum_probs=81.2

Q ss_pred             ccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEec------CC-CCCCcCCCc
Q 018138          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN------YG-VDKYDIGTG  183 (360)
Q Consensus       111 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~------~~-~~~~~~g~g  183 (360)
                      +..+|.||.|.|+|++++++||++ ||+.......  ++..  .++.....   ..+.+...      .. ......+.+
T Consensus         6 ~~~rl~~V~L~V~Dl~~s~~FY~~-lg~~~~~~~~--~~~~--~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (149)
T 4gym_A            6 SQSRLTFVNLPVADVAASQAFFGT-LGFEFNPKFT--DESC--ACMVVSEQ---AFVMLIDRARFADFTSKPIADATATT   77 (149)
T ss_dssp             -CCCCEEEEEEESCHHHHHHHHHH-TTCEECGGGC--BTTE--EEEEEETT---EEEEEEEHHHHGGGCSSCBCCTTTCB
T ss_pred             CCccEEEEEEEeCCHHHHHHHHHH-hCCCcceeec--CCce--eEEeecCc---ceEeeeccccccccccccCCCCCCCC
Confidence            457899999999999999999988 5665543322  2222  23322222   12222211      01 111122345


Q ss_pred             ceEEEEEEC---CHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCC
Q 018138          184 FGHFGIAVE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (360)
Q Consensus       184 ~~hi~f~V~---Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~  240 (360)
                      ..|++|.|+   ++++++++++++|+++..+|...+++  +.+||+|||||.|||+...+
T Consensus        78 ~~~~a~~v~~~~~vd~~~~~~~~~g~~~~~~p~~~~~~--~~~~f~DPDGn~iEi~~~~p  135 (149)
T 4gym_A           78 EAIVCVSAIDRDDVDRFADTALGAGGTVARDPMDYGFM--YGRSFHDLDGHLWEVMWMSA  135 (149)
T ss_dssp             SCEEEEECSSHHHHHHHHHHHHHTTCEECSCCEECSSE--EEEEEECTTCCEEEEEEECT
T ss_pred             eeEEEEEeccHHHHHHHHHHHHhcCceeeccccccCCE--EEEEEEcCCCCEEEEEEECh
Confidence            679999996   58899999999999999998876654  46999999999999997654

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=99.57  E-value=1.2e-14  Score=117.41  Aligned_cols=106  Identities=22%  Similarity=0.282  Sum_probs=78.7

Q ss_pred             CCceeceeeecCHHHHHHHhhhcceEEeeeccCCC----------------ccEEEEEEeCCccc-c------cCCCCee
Q 018138          243 EPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK----------------NAVLELTYNHGVTE-Y------DKGNGYA  299 (360)
Q Consensus       243 ~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~----------------~~~l~l~~~~~~~~-~------~~g~g~~  299 (360)
                      .+++|+.|.|+|++++.+||++    +|||+....                ...+++....+... .      +.+.+.+
T Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~----~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~   79 (134)
T 3rmu_A            4 GRLNHVAIAVPDLEKAAAFYKN----ILGAQVSEAVPLPEHGVSVVFVNLGNTKMELLHPLGLDSPIAGFLQKNKAGGMH   79 (134)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHH----TSCCEECCCEEEGGGTEEEEEEECSSSEEEEEEECSTTCTTHHHHHHCTTCEEE
T ss_pred             ceeeeEEEEeCCHHHHHHHHHH----hcCCEEeEeeecCCCCEEEEEEecCCEEEEEEecCCCCchhhhhhhccCCCCce
Confidence            4689999999999999999999    999975431                12233322221111 0      2345789


Q ss_pred             EEEEEeCCHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEE--ECCCCCeEEEEcC
Q 018138          300 QIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITAC--LDPDGWKSVFVDN  352 (360)
Q Consensus       300 hiaf~V~Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~--~DPdG~~iel~~~  352 (360)
                      |++|.|+|+++++++|+++|+++..++...+..+.+.+++  +|||||.|||+|.
T Consensus        80 hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~e~  134 (134)
T 3rmu_A           80 HICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPKDCGGVLVELEQA  134 (134)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCTTBCCCCEECTTSSEEEEECSCSSCCSCEEEEEC
T ss_pred             EEEEEcCCHHHHHHHHHHcCCcccCCCcccCCCCceEEEEecCCCCcEEEEEEcC
Confidence            9999999999999999999999888765544433466666  8999999999873

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=99.57  E-value=1.3e-14  Score=117.55  Aligned_cols=106  Identities=22%  Similarity=0.316  Sum_probs=81.6

Q ss_pred             CCCceeceeeecCHHHHHHHhhhcceEEeeeccCCC------ccEEEEEEeCCcc-----------cccCCCCeeEEEEE
Q 018138          242 PEPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK------NAVLELTYNHGVT-----------EYDKGNGYAQIAIG  304 (360)
Q Consensus       242 ~~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~------~~~l~l~~~~~~~-----------~~~~g~g~~hiaf~  304 (360)
                      ..+++|+.|.|+|++++.+||++    +|||+....      ...+.+....+..           ......+.+|++|.
T Consensus        11 ~~~i~hv~l~v~D~~~a~~FY~~----~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~   86 (133)
T 4hc5_A           11 IAYVHSATIIVSDQEKALDFYVN----TLGFEKVFDNQLDPNMRFVTVVPPGAQTQVALGLPSWYEDGRKPGGYTGISLI   86 (133)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHH----TTCCEEEEEEEEETTEEEEEEECTTCSCEEEEECGGGCSSCCCSCEEEEEEEE
T ss_pred             ccceeEEEEEECCHHHHHHHHHh----CcCCcEeeecccCCCceEEEEECCCCceEEEEecCcccccccCCCCeEEEEEE
Confidence            45899999999999999999999    999975421      1222222111110           01112467899999


Q ss_pred             eCCHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcC
Q 018138          305 TDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  352 (360)
Q Consensus       305 V~Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  352 (360)
                      |+|+++++++++++|+++..+|...+++ .+.++++||||+.|||++.
T Consensus        87 v~d~~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DP~G~~~el~ee  133 (133)
T 4hc5_A           87 TRDIDEAYKTLTERGVTFTKPPEMMPWG-QRATWFSDPDGNQFFLVEE  133 (133)
T ss_dssp             ESCHHHHHHHHHHTTCEESSSCEECTTS-CEEEEEECTTCEEEEEEEC
T ss_pred             eCCHHHHHHHHHHCCCEeecCCCcCCCC-CEEEEEECCCCCEEEEEeC
Confidence            9999999999999999999888888875 4999999999999999873

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=99.56  E-value=1.8e-14  Score=115.95  Aligned_cols=102  Identities=27%  Similarity=0.337  Sum_probs=78.1

Q ss_pred             CceeceeeecCHHHHHHHhhhcceEEeeeccCCC-----------------ccEEEEEEeCCccc--ccCCCCeeEEEEE
Q 018138          244 PLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK-----------------NAVLELTYNHGVTE--YDKGNGYAQIAIG  304 (360)
Q Consensus       244 ~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~-----------------~~~l~l~~~~~~~~--~~~g~g~~hiaf~  304 (360)
                      +++|+.|.|+|++++.+||++    +|||+....                 ...+++........  ...+.+.+|++|.
T Consensus         3 ~i~hv~l~v~D~~~a~~FY~~----~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~hi~~~   78 (127)
T 3e5d_A            3 KIEHVALWTTNLEQMKQFYVT----YFGATANDLYENKTKGFNSYFLSFEDGARLEIMSRTDVTGKTTGENLGWAHIAIS   78 (127)
T ss_dssp             CCCEEEEECSSHHHHHHHHHH----HHCCEECCCEEEGGGTEEEEEEECSSSCEEEEEEETTCCCCCCSSCSSCCCEEEE
T ss_pred             EEEEEEEEECCHHHHHHHHHH----hcCCeeecccccCCCCccEEEEEcCCCcEEEEEecCCCCCCCCcCCCceEEEEEE
Confidence            689999999999999999999    999975432                 11122222111111  1134578999999


Q ss_pred             eCC---HHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEE
Q 018138          305 TDD---VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFV  350 (360)
Q Consensus       305 V~D---l~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~  350 (360)
                      |+|   +++++++++++|+++..+|...+.+ .+.+||+|||||.|||+
T Consensus        79 v~d~~~v~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~  126 (127)
T 3e5d_A           79 TGTKEAVDELTEKLRQDGFAIAGEPRMTGDG-YYESVVLDPEGNRIEIT  126 (127)
T ss_dssp             CSSHHHHHHHHHHHHHTTCCEEEEEEECTTS-CEEEEEECTTSCEEEEE
T ss_pred             cCCHHHHHHHHHHHHHcCCeEecCcccCCCC-cEEEEEECCCCCEEEEe
Confidence            999   8899999999999999988766654 58899999999999996

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=99.55  E-value=2.5e-14  Score=119.13  Aligned_cols=106  Identities=17%  Similarity=0.196  Sum_probs=81.3

Q ss_pred             CCCceeceeeecCHHHHHHHhhhcceEEeeeccCC-------------Cc----------cEEEEEEeCCccc-----cc
Q 018138          242 PEPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPED-------------KN----------AVLELTYNHGVTE-----YD  293 (360)
Q Consensus       242 ~~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~-------------~~----------~~l~l~~~~~~~~-----~~  293 (360)
                      ..+++||.|.|+|++++.+||++    +|||+...             ..          ..+++........     ..
T Consensus        17 ~~~i~hv~l~v~D~~~a~~FY~~----~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~   92 (156)
T 3kol_A           17 LRKVHHIALNVQDMQASRYFYGT----ILGLHELTDDEVPATLTELVASGKVANFITPDGTILDLFGEPELSPPDPNPEK   92 (156)
T ss_dssp             SCCCCEEEEEESCHHHHHHHHTT----TSCCEECCTTTSCTTTHHHHHTTSEEEEECTTSCEEEEEECTTCCCSSSSTTC
T ss_pred             cceEeEEEEEeCCHHHHHHHHHh----hcCCEEEeecccCcchhcccCCCcEEEEEeCCCCEEEEEecCCCCcCCCCCCC
Confidence            45899999999999999999999    99998432             11          2222222211110     11


Q ss_pred             CCCCeeEEEEEeC--CHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCc
Q 018138          294 KGNGYAQIAIGTD--DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  353 (360)
Q Consensus       294 ~g~g~~hiaf~V~--Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  353 (360)
                      ...+.+|++|.|+  |+++++++|+++|+++..+|...++  ++.+||+|||||.|||++..
T Consensus        93 ~~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~--g~~~~~~DPdG~~iel~~~~  152 (156)
T 3kol_A           93 TFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVTRPT--GRGVYFYDPDGFMIEIRCDP  152 (156)
T ss_dssp             CCSSCCEEEEECCGGGHHHHHHHHHHTTCCEEEEEEEC-C--CEEEEEECTTSCEEEEEECC
T ss_pred             CCCceEEEEEEecHHHHHHHHHHHHHCCCccccCceecCC--ccEEEEECCCCCEEEEEecC
Confidence            2357899999998  9999999999999999988877766  57999999999999999875

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans}

Probab=99.55  E-value=5e-14  Score=117.32  Aligned_cols=117  Identities=21%  Similarity=0.115  Sum_probs=80.7

Q ss_pred             ccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceE----
Q 018138          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGH----  186 (360)
Q Consensus       111 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~h----  186 (360)
                      .++++.|+.|.|+|++++++||+++|||++....... ..+  .++  +.     .|.+... ............|    
T Consensus        18 ~~~~~~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~-~~~--~~~--g~-----~l~l~~~-~~~~~~~~~~~~~~~~g   86 (148)
T 3bt3_A           18 YVVRENGPVYFTKDMDKTVKWFEEILGWSGDIVARDD-EGF--GDY--GC-----VFDYPSE-VAVAHLTPFRGFHLFKG   86 (148)
T ss_dssp             CEEEECCCEEEESCHHHHHHHHHHTTCCEEEEEEECT-TSC--EEE--EE-----EESSCTT-TTSCC--CCCSEEEEES
T ss_pred             ceEEeeeEEEEECCHHHHHHHHHhccCCEEEeeeecC-CCc--cEE--cc-----EEEEecc-CCCcccccccccceeec
Confidence            3678999999999999999999999999996421111 122  223  21     2333111 1100001101122    


Q ss_pred             ------EEE-EECCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecC
Q 018138          187 ------FGI-AVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (360)
Q Consensus       187 ------i~f-~V~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~  239 (360)
                            .+| .|+|+++++++|+++|+++..+|...++|. +.++|+|||||.|||+++.
T Consensus        87 ~~~~~~~~~~~v~dvd~~~~~l~~~G~~~~~~~~~~~~g~-~~~~~~DPdG~~iel~~~~  145 (148)
T 3bt3_A           87 EPIKGVAGFMMIEGIDALHKYVKENGWDQISDIYTQPWGA-RECSITTTDGCILRFFESI  145 (148)
T ss_dssp             CCCSSEEEEEEEECHHHHHHHHHHTTCCCBCCCEEETTTE-EEEEEECTTSCEEEEEEEC
T ss_pred             cCCCccEEEEEcCCHHHHHHHHHHcCCccccCcccCCCcc-EEEEEECCCCCEEEEeeec
Confidence                  255 999999999999999999988888777764 4699999999999999864

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=99.55  E-value=1.7e-14  Score=116.58  Aligned_cols=104  Identities=20%  Similarity=0.287  Sum_probs=79.1

Q ss_pred             CCceeceeeecCHHHHHHHhhhcceEEeeeccCCC----------------ccEEEEEEeC-------Ccc---ccc-CC
Q 018138          243 EPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK----------------NAVLELTYNH-------GVT---EYD-KG  295 (360)
Q Consensus       243 ~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~----------------~~~l~l~~~~-------~~~---~~~-~g  295 (360)
                      .+++|+.|.|+|++++.+||++    +|||+....                ...+++..+.       ...   ..+ .+
T Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~----~lG~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~   79 (134)
T 3l7t_A            4 KAVHHVALIVSDYDKSYEFYVN----QLGFEVIRENHRPKRHDYKLDLKCGDIELEIFGNKLTDSNYCAPPERISWPREA   79 (134)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHH----TSCCEEEEEEEETTTTEEEEEEEETTEEEEEEECCTTSTTCCCCCCCCCSSSCC
T ss_pred             eeEeEEEEEeCCHHHHHHHHHH----hcCCEEEEEeecCCCcceEEEEecCCeEEEEEecccccccccCCccccCCCCCC
Confidence            5789999999999999999999    899875211                1233333311       110   012 34


Q ss_pred             CCeeEEEEEeCCHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEc
Q 018138          296 NGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD  351 (360)
Q Consensus       296 ~g~~hiaf~V~Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  351 (360)
                      .+.+|++|.|+|+++++++++++|+++..++...+++ .+.+|++|||||.|||+|
T Consensus        80 ~g~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~e  134 (134)
T 3l7t_A           80 CGLRHLAFYVEDVEASRQELIALGIRVEEVRYDDYTG-KKMAFFFDPDGLPLELHE  134 (134)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHHHTCCCCCCEECTTSC-CEEEEEECTTCCEEEEEC
T ss_pred             CCeEEEEEEECCHHHHHHHHHhCCCcccceeccCCCc-eEEEEEECCCCCEEEEeC
Confidence            5789999999999999999999999998766554443 689999999999999986

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}

Probab=99.54  E-value=9.2e-14  Score=115.22  Aligned_cols=115  Identities=17%  Similarity=0.237  Sum_probs=80.1

Q ss_pred             EEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecC---C-----CCCCcCCCcceEE
Q 018138          116 LHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY---G-----VDKYDIGTGFGHF  187 (360)
Q Consensus       116 ~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~---~-----~~~~~~g~g~~hi  187 (360)
                      -.+.|.|+|++++++||+++|||++.....  ...  .+++..+.    ..+.+....   .     ......+.++. +
T Consensus         7 ~~~~l~v~Dl~~s~~FY~~~LG~~~~~~~~--~~~--~~~l~~g~----~~l~l~~~~~~~~~~~~~~~~~~~~~g~~-~   77 (145)
T 2rk9_A            7 VVPELYCFDINVSQSFFVDVLGFEVKYERP--DEE--FVYLTLDG----VDVMLEGIAGKSRKWLSGDLEFPLGSGVN-F   77 (145)
T ss_dssp             EEEEEEESSHHHHHHHHHHTTCCEEEEEEG--GGT--EEEEEETT----EEEEEEEC-----------CCSSTTTTEE-E
T ss_pred             ceEEEEECCHHHHHHHHHhccCCEEEeecC--CCC--EEEEEcCC----eEEEEEeccCCCcccccCccccCCCCceE-E
Confidence            357799999999999999999999975322  122  35566542    245554431   1     00112234554 9


Q ss_pred             EEEECCHHHHHHHHHH-cCCeEecCCee-------cCCCCEEEEEEECCCCCEEEEeecCC
Q 018138          188 GIAVEDVAKTVDLVKA-KGGKVTREPGP-------VKGGNTVIAFIEDPDGYKFELLERGP  240 (360)
Q Consensus       188 ~f~V~Dld~~~~rL~~-~G~~~~~~p~~-------~~~g~~~~~~~~DPdG~~iEl~~~~~  240 (360)
                      +|.|+|+++++++|++ +|+++..+|..       ..++. ..++|+|||||.|||++...
T Consensus        78 ~~~v~dvd~~~~~l~~~~G~~~~~~~~~~~~g~~~~~~~~-~~~~~~DPdG~~iel~~~~~  137 (145)
T 2rk9_A           78 QWDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQ-KQFMVQTPDGYLFRFCQDIH  137 (145)
T ss_dssp             EEECSCHHHHHHHHHHHHGGGEEEEEEEEEC-----CCEE-EEEEEECTTCCEEEEEEC--
T ss_pred             EEEECCHHHHHHHHHhhCCCeEecCccccccccCCCCCcc-eEEEEECCCCCEEEEEEcCC
Confidence            9999999999999999 99998877764       23333 46889999999999998764

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=99.53  E-value=1.8e-14  Score=116.80  Aligned_cols=109  Identities=21%  Similarity=0.221  Sum_probs=81.4

Q ss_pred             CCCceeceeeecCHHHHHHHhhhcceEEeeeccCCC----------ccEEEEEEeCCcc---cccCCCCeeEEEEEeCC-
Q 018138          242 PEPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK----------NAVLELTYNHGVT---EYDKGNGYAQIAIGTDD-  307 (360)
Q Consensus       242 ~~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~----------~~~l~l~~~~~~~---~~~~g~g~~hiaf~V~D-  307 (360)
                      ..+++|+.|.|+|++++.+||++    +|||+....          ...+.+.......   ....+.+.+|++|.|+| 
T Consensus         8 ~~~i~hi~l~v~D~~~a~~FY~~----~lG~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~dd   83 (133)
T 3ey7_A            8 ISHLDHLVLTVADIPTTTNFYEK----VLGMKAVSFGAGRIALEFGHQKINLHQLGNEFEPKAQNVRVGSADLCFITDTV   83 (133)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHH----HHCCEEEEETTTEEEEEETTEEEEEEETTSCCSSCCTTCCTTCCEEEEECSSC
T ss_pred             ecccCEEEEEECCHHHHHHHHHH----ccCceEEEecCCeEEEEcCCEEEEEEcCCCCccccCCCCCCCccEEEEEeCcH
Confidence            45799999999999999999999    999975321          1122222211110   01234578999999997 


Q ss_pred             HHHHHHHHHHcCCeEeeCCcccCCCC--cEEEEEECCCCCeEEEEcCcc
Q 018138          308 VYKTAEAIKLSGGKITREPGPLPGIN--TKITACLDPDGWKSVFVDNLD  354 (360)
Q Consensus       308 l~~~~~~l~~~G~~i~~~p~~~~~~~--~~~~~~~DPdG~~iel~~~~~  354 (360)
                      +++++++|+++|+++..+|...++..  .+.+|++|||||.|||++..+
T Consensus        84 ~~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~  132 (133)
T 3ey7_A           84 LSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEVSTYSN  132 (133)
T ss_dssp             HHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEESCC
T ss_pred             HHHHHHHHHHCCCccccCCccccCCCCCeEEEEEECCCCCEEEEEecCC
Confidence            99999999999999988876554432  388999999999999998753

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=99.53  E-value=6e-14  Score=114.47  Aligned_cols=105  Identities=15%  Similarity=0.094  Sum_probs=80.3

Q ss_pred             CCCceeceeeecCHHHHHHHhhhcceEEeeeccCCC-ccEEEEEEeCCc--------ccc-cCCCCeeEEEEEeCC---H
Q 018138          242 PEPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK-NAVLELTYNHGV--------TEY-DKGNGYAQIAIGTDD---V  308 (360)
Q Consensus       242 ~~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~-~~~l~l~~~~~~--------~~~-~~g~g~~hiaf~V~D---l  308 (360)
                      ..++.|+.|.|+|++++++||++    +|||+.... .....+....+.        ... ...++..|++|.|+|   +
T Consensus        11 ~~~i~~v~l~v~D~~~s~~FY~~----~lG~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~v~~~~dv   86 (132)
T 3sk2_A           11 TITPNLQLVYVSNVERSTDFYRF----IFKKEPVFVTPRYVAFPSSGDALFAIWSGGEEPVAEIPRFSEIGIMLPTGEDV   86 (132)
T ss_dssp             CCCCCEEEEECSCHHHHHHHHHH----HHTCCCSEECSSEEEEECSTTCEEEEESSSCCCCTTSCCCEEEEEEESSHHHH
T ss_pred             cceeeEEEEEECCHHHHHHHHHH----HcCCeEEEcCCCEEEEEcCCCcEEEEEeCCCCCcCCCCCcceEEEEeCCHHHH
Confidence            36899999999999999999999    999986421 111222111110        001 123467899999986   9


Q ss_pred             HHHHHHHHH---cCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcC
Q 018138          309 YKTAEAIKL---SGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  352 (360)
Q Consensus       309 ~~~~~~l~~---~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  352 (360)
                      +++++++++   +|+++..+|...+.  ++.++|+|||||.|||++.
T Consensus        87 ~~~~~~l~~~~~~G~~~~~~p~~~~~--g~~~~~~DPdGn~iel~~~  131 (132)
T 3sk2_A           87 DKLFNEWTKQKSHQIIVIKEPYTDVF--GRTFLISDPDGHIIRVCPL  131 (132)
T ss_dssp             HHHHHHHHHCSSSCCEEEEEEEEETT--EEEEEEECTTCCEEEEEEC
T ss_pred             HHHHHHHHhhhcCCCEEeeCCcccCc--eEEEEEECCCCCEEEEEeC
Confidence            999999999   99999998887776  4899999999999999874

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=99.51  E-value=2.5e-14  Score=116.43  Aligned_cols=105  Identities=20%  Similarity=0.246  Sum_probs=76.8

Q ss_pred             CCceeceeeecCHHHHHHHhhhcceEEeeeccCCC-----------------ccEEEEEEeCCcc-c----ccCCCCeeE
Q 018138          243 EPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK-----------------NAVLELTYNHGVT-E----YDKGNGYAQ  300 (360)
Q Consensus       243 ~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~-----------------~~~l~l~~~~~~~-~----~~~g~g~~h  300 (360)
                      .+++|+.|.|+|++++.+||+     +|||+....                 ...+++....... .    ...+.+++|
T Consensus         6 ~~i~hv~i~v~Dl~~a~~FY~-----~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~g~~h   80 (133)
T 3hdp_A            6 LKVHHIGYAVKNIDSALKKFK-----RLGYVEESEVVRDEVRKVYIQFVINGGYRVELVAPDGEDSPINKTIKKGSTPYH   80 (133)
T ss_dssp             CCEEEEEEECSCHHHHHHHHH-----HTTCEECSCCEEETTTTEEEEEEEETTEEEEEEEESSTTCTHHHHTTTSCEEEE
T ss_pred             eeeCEEEEEECCHHHHHHHHH-----HcCCeeecceeccCCcceEEEEEeCCCEEEEEEecCCCCChHHHHHhcCCceEE
Confidence            579999999999999999998     567654211                 1223333221111 0    011578899


Q ss_pred             EEEEeCCHHHHHHHHHHcCCeEeeCCcccC-CCCcEEEEEECCCCCeEEEEcC
Q 018138          301 IAIGTDDVYKTAEAIKLSGGKITREPGPLP-GINTKITACLDPDGWKSVFVDN  352 (360)
Q Consensus       301 iaf~V~Dl~~~~~~l~~~G~~i~~~p~~~~-~~~~~~~~~~DPdG~~iel~~~  352 (360)
                      ++|.|+|+++++++|+++|+++..+|.+.. ..+.+++|++||||+.|||+|+
T Consensus        81 iaf~v~di~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~dPdG~~iEl~e~  133 (133)
T 3hdp_A           81 ICYEVEDIQKSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFSTDIGLIELLEK  133 (133)
T ss_dssp             EEEEESCHHHHHHHHTTTTEEEEEEEEEEGGGTTEEEEEEEETTTEEEEEEEC
T ss_pred             EEEEcCCHHHHHHHHHHcCCccccCCeecccCCCceEEEEECCCceEEEEecC
Confidence            999999999999999999999988654322 1225899999999999999974

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=99.51  E-value=5.7e-14  Score=112.51  Aligned_cols=104  Identities=17%  Similarity=0.244  Sum_probs=76.8

Q ss_pred             CCceeceeeecCHHHHHHHhhhcceEEeeeccCCC------c-c---------EEEEEEeCCccc---ccCCCCeeEEEE
Q 018138          243 EPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK------N-A---------VLELTYNHGVTE---YDKGNGYAQIAI  303 (360)
Q Consensus       243 ~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~------~-~---------~l~l~~~~~~~~---~~~g~g~~hiaf  303 (360)
                      .++.|+.|.|+|++++.+||++    +|||+....      . .         .+++........   .+.+.+.+|++|
T Consensus         4 ~~i~hi~l~v~d~~~a~~FY~~----~lG~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~g~~~~~~   79 (126)
T 2p25_A            4 KEIHHVAINASNYQATKNFYVE----KLGFEVLRENHRPEKNDIKLDLKLGSQELEIFISDQFPARPSYPEALGLRHLAF   79 (126)
T ss_dssp             SCCCCEEEEESCHHHHHHHHTT----TTCCEEEEEEEEGGGTEEEEEEEETTEEEEEEECTTCCCCCCSSCCSSCCCEEE
T ss_pred             cccceEEEEeCCHHHHHHHHHH----hcCCEEEeeccCCCCcceEEEEecCCeEEEEEeccCCCCCCCCCCCccceEEEE
Confidence            4789999999999999999999    899874311      1 1         122221111100   112457889999


Q ss_pred             EeCCHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEc
Q 018138          304 GTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD  351 (360)
Q Consensus       304 ~V~Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  351 (360)
                      .|+|+++++++++++|+++..+|...+.+ .+.+|++|||||.|||++
T Consensus        80 ~v~d~~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~e  126 (126)
T 2p25_A           80 KVEHIEEVIAFLNEQGIETEPLRVDDFTG-KKMTFFFDPDGLPLELHE  126 (126)
T ss_dssp             ECSCHHHHHHHHHHTTCCCCCCEECTTTC-CEEEEEECTTCCEEEEEC
T ss_pred             EeCCHHHHHHHHHHcCCccccccccCCCC-cEEEEEECCCCCEEEeeC
Confidence            99999999999999999987666544443 588999999999999985

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=99.50  E-value=5.4e-14  Score=112.17  Aligned_cols=104  Identities=15%  Similarity=0.122  Sum_probs=77.9

Q ss_pred             CCceeceeeecCHHHHHHHhhhcceEEeeeccCCC-ccEEEEEEe-------CCc-cc-ccCCCCeeEEEEEeCCHHHHH
Q 018138          243 EPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK-NAVLELTYN-------HGV-TE-YDKGNGYAQIAIGTDDVYKTA  312 (360)
Q Consensus       243 ~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~-~~~l~l~~~-------~~~-~~-~~~g~g~~hiaf~V~Dl~~~~  312 (360)
                      .++.|+.|.|+|++++.+||++    +|||+.... .....+...       ... .+ ...+.+ .|++|.|+|+++++
T Consensus         4 m~i~~v~l~v~D~~~a~~FY~~----~lG~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~-~~~~~~v~d~~~~~   78 (118)
T 2i7r_A            4 MNLNQLDIIVSNVPQVCADLEH----ILDKKADYANDGFAQFTIGSHCLMLSQNHLVPLENFQSG-IIIHIEVEDVDQNY   78 (118)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHH----HHTSCCSEEETTEEEEEETTEEEEEESSCSSSCCCCCSC-EEEEEECSCHHHHH
T ss_pred             ceeeEEEEEeCCHHHHHHHHHH----HhCCeeEEeCCCEEEEEeCCeEEEEEcCCCCCcccCCCe-EEEEEEECCHHHHH
Confidence            3688999999999999999999    999986421 112222211       100 01 111234 58999999999999


Q ss_pred             HHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcC
Q 018138          313 EAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  352 (360)
Q Consensus       313 ~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  352 (360)
                      ++++++|+++..+|...+.+ .+.++++|||||.|||++.
T Consensus        79 ~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~  117 (118)
T 2i7r_A           79 KRLNELGIKVLHGPTVTDWG-TESLLVQGPAGLVLDFYRM  117 (118)
T ss_dssp             HHHHHHTCCEEEEEEECTTS-CEEEEEECGGGCEEEEEEC
T ss_pred             HHHHHCCCceecCCccccCc-cEEEEEECCCccEEEEEec
Confidence            99999999998888777764 5889999999999999874

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=99.49  E-value=1.2e-13  Score=119.38  Aligned_cols=109  Identities=29%  Similarity=0.469  Sum_probs=82.4

Q ss_pred             CCCceeceeeecCHHHHHHHhhhcceEEeeeccCCC-----------------------------------ccEEEEEEe
Q 018138          242 PEPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK-----------------------------------NAVLELTYN  286 (360)
Q Consensus       242 ~~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~-----------------------------------~~~l~l~~~  286 (360)
                      ..+++|+.|.|+|++++.+||++    +|||+....                                   ...++|...
T Consensus        29 ~~~i~hv~l~v~Dl~~a~~FY~~----~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~L~~~  104 (184)
T 2za0_A           29 DFLLQQTMLRIKDPKKSLDFYTR----VLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHN  104 (184)
T ss_dssp             TCEEEEEEEECSCHHHHHHHHHH----TTCCEEEEEEEEGGGTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEE
T ss_pred             ceeEEEEEEEeCCHHHHHHHHHH----hcCCEEEEeccCCCCCceeEEecccccccCCcccchheeeecCCCceEEEEec
Confidence            45899999999999999999999    888864211                                   123333332


Q ss_pred             CCccc-----cc----CCCCeeEEEEEeCCHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCcccc
Q 018138          287 HGVTE-----YD----KGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFL  356 (360)
Q Consensus       287 ~~~~~-----~~----~g~g~~hiaf~V~Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~  356 (360)
                      .+...     +.    ...+.+|++|.|+|+++++++|+++|+++..+|...++  ++.+||+|||||.|||++...+-
T Consensus       105 ~~~~~~~~~~~~~~~~~~~g~~hi~f~v~dvd~~~~~l~~~G~~~~~~p~~~~~--~~~~~~~DPdG~~iel~~~~~~~  181 (184)
T 2za0_A          105 WGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKM--KGLAFIQDPDGYWIEILNPNKIA  181 (184)
T ss_dssp             TTGGGCTTCCCCCSSSSSCCEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSS--TTCEEEECTTCCEEEEECTTTGG
T ss_pred             CCCCCCcccccccCCCCCCCeeEEEEEeCCHHHHHHHHHHCCCeeecCCcCCCc--eeEEEEECCCCCEEEEEecCccc
Confidence            22110     11    12478999999999999999999999999988876444  46799999999999999987654

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=99.49  E-value=5.6e-14  Score=118.30  Aligned_cols=104  Identities=17%  Similarity=0.229  Sum_probs=79.7

Q ss_pred             CCCceeceeeecCHHHHHHHhhhcceEEeeeccCCC------------------------------ccEEEEEEeCCc-c
Q 018138          242 PEPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK------------------------------NAVLELTYNHGV-T  290 (360)
Q Consensus       242 ~~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~------------------------------~~~l~l~~~~~~-~  290 (360)
                      ..+++||.|.|+|++++++||++    +||++....                              ...++|...... .
T Consensus        17 ~~~i~Hv~i~V~Dle~a~~FY~~----~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~leL~~~~~~~~   92 (159)
T 3gm5_A           17 MRNTVQIGIVVRDIEESLQNYAE----FFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFELGPLQLELIEPDENPS   92 (159)
T ss_dssp             GGGCEEEEEECSCHHHHHHHHHH----HTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEETTEEEEEEEECSSSC
T ss_pred             cccccEEEEEeCCHHHHHHHHHH----hhCCCCceEEecCCcccccceeecccccceEEEEEEecCCEEEEEEEECCCCC
Confidence            46899999999999999999999    999974321                              122333322111 1


Q ss_pred             cc-----cCCCCeeEEEEEeCCHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCC--CCeEEEEcC
Q 018138          291 EY-----DKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPD--GWKSVFVDN  352 (360)
Q Consensus       291 ~~-----~~g~g~~hiaf~V~Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPd--G~~iel~~~  352 (360)
                      .+     ..+.|++|++|.|+|+++++++|+++|+++..++. .++  .+++|++|||  |+.|||+++
T Consensus        93 ~~~~~l~~~~~g~~Hiaf~v~di~~~~~~l~~~G~~~~~~~~-~~g--~~~~~~~dpd~~G~~iEl~e~  158 (159)
T 3gm5_A           93 TWREFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQKGD-FEG--GRYAYIDTLRALKVMIELLEN  158 (159)
T ss_dssp             HHHHHHHHHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEE-ETT--EEEEEESCHHHHSSEEEEEEE
T ss_pred             hhHHHhhcCCceEEEEEEEcCCHHHHHHHHHHCCCcEeeccc-cCC--eeEEEEeccccCcEEEEEEec
Confidence            11     13568999999999999999999999999977653 333  6899999999  999999985

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=99.49  E-value=1e-13  Score=111.83  Aligned_cols=104  Identities=15%  Similarity=0.110  Sum_probs=77.6

Q ss_pred             CCceeceeee--cCHHHHHHHhhhcceEEeeeccCCCc------cEEEEEEeCCcc-----cccCCCCeeEEEEEeCCHH
Q 018138          243 EPLCQVMLRV--GDLDRAINFYKKYTIAVMGYGPEDKN------AVLELTYNHGVT-----EYDKGNGYAQIAIGTDDVY  309 (360)
Q Consensus       243 ~~i~hv~L~V--~D~e~a~~FY~~~~~~~lG~~~~~~~------~~l~l~~~~~~~-----~~~~g~g~~hiaf~V~Dl~  309 (360)
                      .+++|+.|.|  +|++++.+||++    +|||+.....      ....+.......     ......+.+|++|.|+|++
T Consensus         9 ~~i~hv~l~v~~~D~~~a~~FY~~----~lG~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~f~v~d~~   84 (126)
T 2qqz_A            9 QGIDHVQVAAPVGCEEEARAFYGE----TIGMEEIPKPEELKKRGGCWFKCGNQEIHIGVEQNFNPAKRAHPAFYVLKID   84 (126)
T ss_dssp             EEEEEEEEEECTTTHHHHHHHHTT----TTCCEEECCCGGGGGGCCEEEEETTEEEEEEECTTCCCCSSSCEEEEETTHH
T ss_pred             ceeeeEEEEcccccHHHHHHHHHh----cCCCEEecCcccccCCCceEEEeCCEEEEEEecCCCCCCCceEEEEEcCCHH
Confidence            4689999999  899999999999    9999753211      112222110000     0111246799999999999


Q ss_pred             HHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCc
Q 018138          310 KTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  353 (360)
Q Consensus       310 ~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  353 (360)
                      +++++++++|+++..++. .++  .+.+||+|||||.|||++..
T Consensus        85 ~~~~~l~~~G~~~~~~~~-~~g--~~~~~~~DPdG~~iel~~~~  125 (126)
T 2qqz_A           85 EFKQELIKQGIEVIDDHA-RPD--VIRFYVSDPFGNRIEFMENK  125 (126)
T ss_dssp             HHHHHHHHTTCCCEEECS-STT--EEEEEEECTTSCEEEEEEEC
T ss_pred             HHHHHHHHcCCCccCCCC-CCC--eeEEEEECCCCCEEEEEeCC
Confidence            999999999999988773 333  68899999999999999864

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=99.48  E-value=7.3e-14  Score=116.58  Aligned_cols=108  Identities=19%  Similarity=0.272  Sum_probs=79.6

Q ss_pred             CCceeceeeecCHHHHHHHhhhcceEEeeeccCCC----------ccEEEEEEeCCc---ccccCCCCeeEEEEEeC-CH
Q 018138          243 EPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK----------NAVLELTYNHGV---TEYDKGNGYAQIAIGTD-DV  308 (360)
Q Consensus       243 ~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~----------~~~l~l~~~~~~---~~~~~g~g~~hiaf~V~-Dl  308 (360)
                      .+++|+.|.|+|++++++||++    +|||+....          +..+.+......   .......+.+|++|.++ |+
T Consensus        22 ~~l~hv~l~v~D~~~a~~FY~~----vLG~~~~~~~~~~~~l~~~~~~l~l~~~~~~~~~~~~~~~~g~~hi~f~~~~dl   97 (152)
T 3huh_A           22 DRIDHLVLTVSDISTTIRFYEE----VLGFSAVTFKQNRKALIFGAQKINLHQQEMEFEPKASRPTPGSADLCFITSTPI   97 (152)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHH----TTCCEEEEETTTEEEEEETTEEEEEEETTBCCSSCCSSCCTTCCEEEEEESSCH
T ss_pred             ceeeEEEEEeCCHHHHHHHHHh----cCCCEEEEccCCeEEEEeCCeEEEEeccCCcCCCcCcCCCCCccEEEEEecCCH
Confidence            5799999999999999999999    999975321          112222221111   01123457899999986 99


Q ss_pred             HHHHHHHHHcCCeEeeCCcccCCCC--cEEEEEECCCCCeEEEEcCcc
Q 018138          309 YKTAEAIKLSGGKITREPGPLPGIN--TKITACLDPDGWKSVFVDNLD  354 (360)
Q Consensus       309 ~~~~~~l~~~G~~i~~~p~~~~~~~--~~~~~~~DPdG~~iel~~~~~  354 (360)
                      ++++++|+++|+++..+|...++..  .+.+||+|||||.|||++...
T Consensus        98 ~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~  145 (152)
T 3huh_A           98 NDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDGNLIEISQYVE  145 (152)
T ss_dssp             HHHHHHHHHTTCCCSEEEEEEEETTEEEEEEEEECTTCCEEEEEEC--
T ss_pred             HHHHHHHHHCCCeEecCCccccCCCCcEEEEEEECCCCCEEEEEeccc
Confidence            9999999999999988776554432  488999999999999998753

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=99.47  E-value=2e-13  Score=113.75  Aligned_cols=104  Identities=16%  Similarity=0.079  Sum_probs=74.6

Q ss_pred             CCCceeceeeecCHHHHHHHhhhcceEEeeeccCC--CccEEEEEEeCC-----------------cccccCCCCeeEEE
Q 018138          242 PEPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPED--KNAVLELTYNHG-----------------VTEYDKGNGYAQIA  302 (360)
Q Consensus       242 ~~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~--~~~~l~l~~~~~-----------------~~~~~~g~g~~hia  302 (360)
                      ..+|.||.|.|+|+++|++||++    +++.....  ......+....+                 ......+.+..|++
T Consensus         7 ~~rl~~V~L~V~Dl~~s~~FY~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a   82 (149)
T 4gym_A            7 QSRLTFVNLPVADVAASQAFFGT----LGFEFNPKFTDESCACMVVSEQAFVMLIDRARFADFTSKPIADATATTEAIVC   82 (149)
T ss_dssp             CCCCEEEEEEESCHHHHHHHHHH----TTCEECGGGCBTTEEEEEEETTEEEEEEEHHHHGGGCSSCBCCTTTCBSCEEE
T ss_pred             CccEEEEEEEeCCHHHHHHHHHH----hCCCcceeecCCceeEEeecCcceEeeeccccccccccccCCCCCCCCeeEEE
Confidence            56899999999999999999997    54443211  011111111000                 00011234557999


Q ss_pred             EEeC---CHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEc
Q 018138          303 IGTD---DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD  351 (360)
Q Consensus       303 f~V~---Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  351 (360)
                      |.|+   |+++++++++++|+++..+|.++++  ++.+||+|||||.|||+.
T Consensus        83 ~~v~~~~~vd~~~~~~~~~g~~~~~~p~~~~~--~~~~~f~DPDGn~iEi~~  132 (149)
T 4gym_A           83 VSAIDRDDVDRFADTALGAGGTVARDPMDYGF--MYGRSFHDLDGHLWEVMW  132 (149)
T ss_dssp             EECSSHHHHHHHHHHHHHTTCEECSCCEECSS--EEEEEEECTTCCEEEEEE
T ss_pred             EEeccHHHHHHHHHHHHhcCceeeccccccCC--EEEEEEEcCCCCEEEEEE
Confidence            9995   5889999999999999999988776  688999999999999974

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=99.47  E-value=1.3e-13  Score=114.98  Aligned_cols=109  Identities=21%  Similarity=0.278  Sum_probs=83.0

Q ss_pred             CCceeceeeecCHHHHHHHhhhcceEEeeeccCCC----------ccEEEEEEeCCcc---c--ccCCCCeeEEEEEe--
Q 018138          243 EPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK----------NAVLELTYNHGVT---E--YDKGNGYAQIAIGT--  305 (360)
Q Consensus       243 ~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~----------~~~l~l~~~~~~~---~--~~~g~g~~hiaf~V--  305 (360)
                      .++.|+.|.|+|++++.+||++    +|||+....          ...+.+....+..   .  ...+.+.+|++|.|  
T Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~----~LG~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~f~v~~   79 (150)
T 3bqx_A            4 QQVAVITLGIGDLEASARFYGE----GFGWAPVFRNPEIIFYQMNGFVLATWLVQNLQEDVGVAVTSRPGSMALAHNVRA   79 (150)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHH----TSCCCCSEECSSEEEEECSSSEEEEEEHHHHHHHHSSCCCSSCCSCEEEEECSS
T ss_pred             cceEEEEEEcCCHHHHHHHHHH----hcCCEeecCCCCEEEEEcCCEEEEEEeccccccccCCCCCCCCCeEEEEEEeCC
Confidence            4789999999999999999999    999976432          1122222211100   0  01145678999999  


Q ss_pred             -CCHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCcccc
Q 018138          306 -DDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFL  356 (360)
Q Consensus       306 -~Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~  356 (360)
                       +|+++++++|+++|+++..+|...+.+ .+.+||+|||||.|||++...+.
T Consensus        80 ~~dv~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~~~~  130 (150)
T 3bqx_A           80 ETEVAPLMERLVAAGGQLLRPADAPPHG-GLRGYVADPDGHIWEIAFNPVWP  130 (150)
T ss_dssp             GGGHHHHHHHHHHTTCEEEEEEECCTTS-SEEEEEECTTCCEEEEEECTTSC
T ss_pred             HHHHHHHHHHHHHCCCEEecCCcccCCC-CEEEEEECCCCCEEEEEeCCCce
Confidence             899999999999999999888777654 58999999999999999876553

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=99.47  E-value=2e-13  Score=112.94  Aligned_cols=103  Identities=36%  Similarity=0.593  Sum_probs=75.5

Q ss_pred             CCCceeceeeecCHHHHHHHhhhcceEEeeeccCCC------c--------------cEEEEEEeCCcccccCCCCeeEE
Q 018138          242 PEPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK------N--------------AVLELTYNHGVTEYDKGNGYAQI  301 (360)
Q Consensus       242 ~~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~------~--------------~~l~l~~~~~~~~~~~g~g~~hi  301 (360)
                      ..+++|+.|.|+|++++.+||++    +|||+....      .              ..+++.........+.+.+.+|+
T Consensus         6 ~~~i~hv~l~v~D~~~a~~FY~~----~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~   81 (144)
T 2c21_A            6 SRRMLHTMIRVGDLDRSIKFYTE----RLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHI   81 (144)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHH----TTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEE
T ss_pred             cceeEEEEEEeCCHHHHHHHHHh----cCCCEEEEeeecCCCCeEEEEEEcCCCCCceEEEEEecCCCCCCCCCCCceEE
Confidence            35789999999999999999998    888874321      0              11222221111112234678999


Q ss_pred             EEEeCCHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCc
Q 018138          302 AIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  353 (360)
Q Consensus       302 af~V~Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  353 (360)
                      +|.|+|+++++++|+++|+++..+     .+...++||+|||||.|||++..
T Consensus        82 ~f~v~d~~~~~~~l~~~G~~~~~~-----~g~~~~~~~~DPdG~~iel~~~~  128 (144)
T 2c21_A           82 AIGVEDVKELVADMRKHDVPIDYE-----DESGFMAFVVDPDGYYIELLNEK  128 (144)
T ss_dssp             EEEESCHHHHHHHHHHTTCCEEEE-----CSSSSEEEEECTTSCEEEEEEHH
T ss_pred             EEEeCCHHHHHHHHHHCCCEEecc-----CCcEEEEEEECCCCCEEEEEEcC
Confidence            999999999999999999998765     22134559999999999999864

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=99.46  E-value=1.7e-13  Score=111.36  Aligned_cols=105  Identities=19%  Similarity=0.182  Sum_probs=78.5

Q ss_pred             CCceeceeeecCHHHHHHHhhhcceEEeeeccCCCccEE--------EEEEeCCc-c---cc--cCCCCeeEEEEEe--C
Q 018138          243 EPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDKNAVL--------ELTYNHGV-T---EY--DKGNGYAQIAIGT--D  306 (360)
Q Consensus       243 ~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~~~~l--------~l~~~~~~-~---~~--~~g~g~~hiaf~V--~  306 (360)
                      .+++|+.|.|+|++++.+||++    +|||+........        .+.. .+. .   ..  ....+.+|++|.|  +
T Consensus         3 ~~i~hv~l~v~D~~~a~~FY~~----~lG~~~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~~~~~~~~~~h~~~~v~~~   77 (133)
T 2p7o_A            3 SGLSHITLIVKDLNKTTAFLQN----IFNAEEIYSSGDKTFSLSKEKFFLI-AGLWICIMEGDSLQERTYNHIAFQIQSE   77 (133)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHH----HHCCEECC-----CCCSSCEEEEEE-TTEEEEEEECSSCCCCCSCEEEEECCGG
T ss_pred             ceEEEEEEEcCCHHHHHHHHHH----hcCCEEeeecCCcccccCCceEEEe-CCEEEEEecCCCCCCCCeeEEEEEcCHH
Confidence            4689999999999999999999    9999754321100        1111 111 0   00  1245789999999  5


Q ss_pred             CHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCc
Q 018138          307 DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  353 (360)
Q Consensus       307 Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  353 (360)
                      |+++++++++++|+++..+|...+++ ++.+|++|||||.|||++..
T Consensus        78 d~~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~~DPdG~~iel~~~~  123 (133)
T 2p7o_A           78 EVDEYTERIKALGVEMKPERPRVQGE-GRSIYFYDFDNHLFELHAGT  123 (133)
T ss_dssp             GHHHHHHHHHHHTCCEECCCCCCTTC-CCEEEEECSSSCEEEEECSS
T ss_pred             HHHHHHHHHHHCCCcccCCCccCCCC-eeEEEEECCCCCEEEEEcCC
Confidence            99999999999999999887655443 68899999999999999874

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=99.46  E-value=1.1e-13  Score=117.14  Aligned_cols=108  Identities=17%  Similarity=0.254  Sum_probs=78.9

Q ss_pred             CCCceeceeeecCHHHHHHHhhhcceEEeeeccCCC----------------ccEEEEEEeCCcc-cc-----cCCCCee
Q 018138          242 PEPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK----------------NAVLELTYNHGVT-EY-----DKGNGYA  299 (360)
Q Consensus       242 ~~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~----------------~~~l~l~~~~~~~-~~-----~~g~g~~  299 (360)
                      ..+++||.|.|+|++++++||++    +|||+....                ...+++....... ..     ..+.|++
T Consensus         6 ~~~i~Hv~l~V~Dl~~a~~FY~~----~LG~~~~~~~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~g~~   81 (161)
T 3oa4_A            6 SNKLDHIGIAVTSIKDVLPFYVG----SLKLKLLGMEDLPSQGVKIAFLEIGESKIELLEPLSEESPIAKFIQKRGEGIH   81 (161)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHH----TSCCEEEEEEEEGGGTEEEEEEEETTEEEEEEEESSTTSHHHHHHHHHCSEEE
T ss_pred             cCcCCEEEEEECCHHHHHHHHHH----ccCCeEeeeeccCCCCeEEEEEeCCCeEEEEEeECCCCChHHHHhhcCCCCeE
Confidence            45799999999999999999999    899874321                1122222221111 00     2356899


Q ss_pred             EEEEEeCCHHHHHHHHHHcCCeEeeC-CcccCCCCcEEEEE--ECCCCCeEEEEcCcc
Q 018138          300 QIAIGTDDVYKTAEAIKLSGGKITRE-PGPLPGINTKITAC--LDPDGWKSVFVDNLD  354 (360)
Q Consensus       300 hiaf~V~Dl~~~~~~l~~~G~~i~~~-p~~~~~~~~~~~~~--~DPdG~~iel~~~~~  354 (360)
                      |++|.|+|+++++++|+++|+++..+ |...+++ .+++|+  +||||+.|||++..+
T Consensus        82 Hiaf~V~Did~~~~~l~~~G~~~~~~~~~~~~~g-~~~~f~~~~DPdG~~iEl~~~~~  138 (161)
T 3oa4_A           82 HIAIGVKSIEERIQEVKENGVQMINDEPVPGARG-AQVAFLHPRSARGVLYEFCEKKE  138 (161)
T ss_dssp             EEEEECSCHHHHHHHHHHTTCCBSCSSCEECGGG-CEEEEBCGGGTTTCCEEEEECCC
T ss_pred             EEEEEECCHHHHHHHHHHCCCEecccCcccCCCC-cEEEEEeccCCCeEEEEEEecCC
Confidence            99999999999999999999999877 4433332 467777  499999999998753

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=99.46  E-value=2.2e-13  Score=112.65  Aligned_cols=105  Identities=14%  Similarity=0.192  Sum_probs=77.8

Q ss_pred             CCCceeceeeecCHHHHHHHhhhcceEEeeeccCCC---ccEEEEEEeCCcc--c---ccCCCCeeEEEEEeC--CHHHH
Q 018138          242 PEPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK---NAVLELTYNHGVT--E---YDKGNGYAQIAIGTD--DVYKT  311 (360)
Q Consensus       242 ~~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~---~~~l~l~~~~~~~--~---~~~g~g~~hiaf~V~--Dl~~~  311 (360)
                      ..++.|+.|.|+|++++.+||++    +|||+....   .....+....+..  .   .+...+..|++|.|+  |++++
T Consensus        26 i~~i~hv~l~v~Dl~~a~~FY~~----~LG~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~h~~~~v~~~dld~~  101 (141)
T 3ghj_A           26 IKGLFEVAVKVKNLEKSSQFYTE----ILGFEAGLLDSARRWNFLWVSGRAGMVVLQEEKENWQQQHFSFRVEKSEIEPL  101 (141)
T ss_dssp             CCCCCEEEEEESCHHHHHHHHHH----TSCCEEEEEETTTTEEEEEETTTTEEEEEEECCSSCCCCEEEEEECGGGHHHH
T ss_pred             eceecEEEEEeCCHHHHHHHHHH----hcCCEEEEecCCCcEEEEEecCCCcEEEEeccCCCCCCceEEEEEeHHHHHHH
Confidence            45899999999999999999999    999975321   1122222221111  1   123356789999997  99999


Q ss_pred             HHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEc
Q 018138          312 AEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD  351 (360)
Q Consensus       312 ~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  351 (360)
                      +++|+++|+++. +|...+.+.++.+||+|||||.|||+.
T Consensus       102 ~~~l~~~G~~~~-~~~~~~~~~~~~~~~~DPdG~~iel~~  140 (141)
T 3ghj_A          102 KKALESKGVSVH-GPVNQEWMQAVSLYFADPNGHALEFTA  140 (141)
T ss_dssp             HHHHHHTTCCCE-EEEEEGGGTEEEEEEECTTCCEEEEEE
T ss_pred             HHHHHHCCCeEe-CCcccCCCCceEEEEECCCCCEEEEEE
Confidence            999999999988 444444444689999999999999985

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}

Probab=99.46  E-value=3.4e-13  Score=110.46  Aligned_cols=105  Identities=19%  Similarity=0.138  Sum_probs=77.8

Q ss_pred             CceeceeeecCHHHHHHHhhhcceEEeeeccCC----Cc--cEEEE---------EEeCCccc-ccCC-CCeeEEEEEeC
Q 018138          244 PLCQVMLRVGDLDRAINFYKKYTIAVMGYGPED----KN--AVLEL---------TYNHGVTE-YDKG-NGYAQIAIGTD  306 (360)
Q Consensus       244 ~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~----~~--~~l~l---------~~~~~~~~-~~~g-~g~~hiaf~V~  306 (360)
                      ...++.|.|+|++++++||++    +|||+...    ..  ....+         ........ ...+ .+.+|++|.|+
T Consensus         2 ~~~~i~l~v~D~~~a~~FY~~----~lG~~~~~~~~~~g~~~~~~l~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~v~   77 (137)
T 3itw_A            2 SHMVVELAYTDPDRAVDWLVR----VFGFRLLLRQPAIGTIRHADLDTGGGIVMVRRTGEPYTVSCAGGHTCKQVIVWVS   77 (137)
T ss_dssp             CCCEEEEEESCHHHHHHHHHH----HHCCEEEEEESSSSSCSEEEEECSSSEEEEEETTCCSSCEECCCCCCCEEEEEES
T ss_pred             CeEEEEEEECCHHHHHHHHHH----ccCCEEEEEecCCCcEEEEEEecCCeEEEEEecCCCcCccCCCCCcEEEEEEEeC
Confidence            346789999999999999999    99987531    01  12222         21111000 1112 33349999999


Q ss_pred             CHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCc
Q 018138          307 DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  353 (360)
Q Consensus       307 Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  353 (360)
                      |+++++++++++|+++..+|...+++ .+.++|+|||||.|||++..
T Consensus        78 dv~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~  123 (137)
T 3itw_A           78 DVDEHFMRSTAAGADIVQPLQDKPWG-LRQYLVRDLEGHLWEFTRHL  123 (137)
T ss_dssp             CHHHHHHHHHHTTCEEEEEEEEETTT-EEEEEEECSSSCEEEEEECC
T ss_pred             CHHHHHHHHHHcCCeeccCccccCCC-cEEEEEECCCCCEEEEEEEc
Confidence            99999999999999999988877764 58999999999999999974

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=99.46  E-value=2.3e-13  Score=113.79  Aligned_cols=106  Identities=12%  Similarity=0.130  Sum_probs=77.6

Q ss_pred             CCceeceeeecCHHHHHHHhhhcceEEeeeccCCC-ccEEEEEE----------eCCcccc-cCCCCeeEEEEEeCC---
Q 018138          243 EPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK-NAVLELTY----------NHGVTEY-DKGNGYAQIAIGTDD---  307 (360)
Q Consensus       243 ~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~-~~~l~l~~----------~~~~~~~-~~g~g~~hiaf~V~D---  307 (360)
                      .++.|+.|.|+|++++++||++    +|||+.... .....+..          ....... ....+..|++|.|+|   
T Consensus         5 ~~i~hv~l~v~Dl~~a~~FY~~----vLG~~~~~~~~~~~~~~~~~g~~l~l~~~~~~~~~~~~~~~~~~l~f~v~d~~d   80 (148)
T 3rhe_A            5 SDPNLVLFYVKNPAKSEEFYKN----LLDTQPIESSPTFAMFVMKTGLRLGLWAQEEIEPKAHQTGGGMELSFQVNSNEM   80 (148)
T ss_dssp             --CEEEEEEESCHHHHHHHHHH----HHTCCCSEECSSEEEEECTTSCEEEEEEGGGCSSCCC----CEEEEEECSCHHH
T ss_pred             ccccEEEEEeCCHHHHHHHHHH----HcCCEEeccCCCEEEEEcCCCcEEEEecCCcCCccccCCCCeEEEEEEcCCHHH
Confidence            4689999999999999999999    999986422 11222221          1110000 123467899999987   


Q ss_pred             HHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCcc
Q 018138          308 VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  354 (360)
Q Consensus       308 l~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  354 (360)
                      +++++++|+++|+++..+|...+.  ++.++|+|||||.|||++...
T Consensus        81 vd~~~~~l~~~G~~i~~~p~~~~~--G~~~~~~DPdG~~iel~~~~~  125 (148)
T 3rhe_A           81 VDEIHRQWSDKEISIIQPPTQMDF--GYTFVGVDPDEHRLRIFCLKR  125 (148)
T ss_dssp             HHHHHHHHHHTTCCEEEEEEEETT--EEEEEEECTTCCEEEEEEEC-
T ss_pred             HHHHHHHHHhCCCEEEeCCeecCC--CcEEEEECCCCCEEEEEEcCh
Confidence            999999999999999998887777  488999999999999998743

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=99.45  E-value=2e-13  Score=113.50  Aligned_cols=105  Identities=21%  Similarity=0.233  Sum_probs=79.9

Q ss_pred             CCceeceeeecCHHHHHHHhhhcceEEeeeccCCC-----------ccEEEEEEeCCcccc-cCCCCeeEEEEEeC---C
Q 018138          243 EPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK-----------NAVLELTYNHGVTEY-DKGNGYAQIAIGTD---D  307 (360)
Q Consensus       243 ~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~-----------~~~l~l~~~~~~~~~-~~g~g~~hiaf~V~---D  307 (360)
                      .++.|+.|.|+|++++.+||++    +|||+....           ...+.+......... ..+.+.+|++|.|+   |
T Consensus        24 ~~l~hv~l~v~Dl~~a~~FY~~----~LG~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~hl~f~v~d~~d   99 (144)
T 2kjz_A           24 THPDFTILYVDNPPASTQFYKA----LLGVDPVESSPTFSLFVLANGMKLGLWSRHTVEPKASVTGGGGELAFRVENDAQ   99 (144)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHH----HHTCCCSEEETTEEEEECTTSCEEEEEETTSCSSCCCCSSSSCEEEEECSSHHH
T ss_pred             CceeEEEEEeCCHHHHHHHHHH----ccCCEeccCCCCeEEEEcCCCcEEEEEeCCCCCCccCCCCCceEEEEEeCCHHH
Confidence            4899999999999999999999    999976431           112222211111111 12357899999997   5


Q ss_pred             HHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCc
Q 018138          308 VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  353 (360)
Q Consensus       308 l~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  353 (360)
                      +++++++|+++|+++..+|...++  ++.+||+|||||.|||++..
T Consensus       100 v~~~~~~l~~~G~~~~~~~~~~~~--g~~~~~~DPdG~~iel~~~~  143 (144)
T 2kjz_A          100 VDETFAGWKASGVAMLQQPAKMEF--GYTFTAADPDSHRLRVYAFA  143 (144)
T ss_dssp             HHHHHHHHHHTTCCCCSCCEEETT--EEEEEECCTTCCEEEEEEEC
T ss_pred             HHHHHHHHHHCCCeEecCceecCC--ceEEEEECCCCCEEEEEecC
Confidence            899999999999999988877666  48899999999999999753

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=99.45  E-value=7.9e-14  Score=111.12  Aligned_cols=103  Identities=15%  Similarity=0.102  Sum_probs=77.7

Q ss_pred             CceeceeeecCHHHHHHHhhhcceEEeeeccCCC-ccEEEEEEeC--Cc-cc----ccCCCCeeEEEEEeCCHHHHHHHH
Q 018138          244 PLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK-NAVLELTYNH--GV-TE----YDKGNGYAQIAIGTDDVYKTAEAI  315 (360)
Q Consensus       244 ~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~-~~~l~l~~~~--~~-~~----~~~g~g~~hiaf~V~Dl~~~~~~l  315 (360)
                      .+ |+.|.|+|++++.+||++    +|||+.... .....+....  +. ..    .....+.+|++|.|+|++++++++
T Consensus         8 ~i-~v~l~v~d~~~a~~FY~~----~lG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~v~d~~~~~~~l   82 (119)
T 2pjs_A            8 RV-VANIATPEPARAQAFYGD----ILGMPVAMDHGWIVTHASPLEAHAQVSFAREGGSGTDVPDLSIEVDNFDEVHARI   82 (119)
T ss_dssp             EE-EEEEECSCGGGGHHHHTT----TTCCCEEEECSSEEEEEEEEEEEEEEEEESSSBTTBCCCSEEEEESCHHHHHHHH
T ss_pred             EE-EEEEEcCCHHHHHHHHHH----hcCCEEEecCCEEEEEecCCCCcEEEEEEcCCCCCCceeEEEEEECCHHHHHHHH
Confidence            56 999999999999999999    999975321 1111222110  00 00    012345789999999999999999


Q ss_pred             HHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcC
Q 018138          316 KLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  352 (360)
Q Consensus       316 ~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  352 (360)
                      +++|+++..+|.+.+.+ .+.+|++|||||.|||++.
T Consensus        83 ~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~  118 (119)
T 2pjs_A           83 LKAGLPIEYGPVTEAWG-VQRLFLRDPFGKLINILSH  118 (119)
T ss_dssp             HHTTCCCSEEEEECTTS-CEEEEEECTTSCEEEEEEC
T ss_pred             HHCCCccccCCccCCCc-cEEEEEECCCCCEEEEEec
Confidence            99999998888777754 5899999999999999875

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=99.45  E-value=2.7e-13  Score=113.24  Aligned_cols=105  Identities=15%  Similarity=0.192  Sum_probs=79.6

Q ss_pred             CCceeceeeecCHHHHHHHhhhcceEEeeeccCC--CccEEEEEEeCCc------------ccc---cCCCCeeEEEEEe
Q 018138          243 EPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPED--KNAVLELTYNHGV------------TEY---DKGNGYAQIAIGT  305 (360)
Q Consensus       243 ~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~--~~~~l~l~~~~~~------------~~~---~~g~g~~hiaf~V  305 (360)
                      .++.|+.|.|+|++++++||++    +|||+...  ......+......            ...   +..++ +|++|.|
T Consensus        24 ~~i~hv~l~v~Dl~~a~~FY~~----vLG~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g-~~l~f~v   98 (148)
T 2r6u_A           24 GRIVHFEIPFDDGDRARAFYRD----AFGWAIAEIPDMDYSMVTTGPVGESGMPDEPGYINGGMMQRGEVTT-PVVTVDV   98 (148)
T ss_dssp             CCEEEEEEEESSHHHHHHHHHH----HHCCEEEEETTTTEEEEECSCBCTTSSBCSSSCBCEEEEESSSSCS-CEEEEEC
T ss_pred             CceEEEEEEeCCHHHHHHHHHH----ccCcEEEECCCCCEEEEEeCCcceeecccCCcccccceeecCCCCe-EEEEEEc
Confidence            5799999999999999999999    99997532  1223333321110            011   11134 5999999


Q ss_pred             CCHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCc
Q 018138          306 DDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  353 (360)
Q Consensus       306 ~Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  353 (360)
                      +|+++++++|+++|+++..+|.+.++. ++.+||+|||||.|||++..
T Consensus        99 ~dld~~~~~l~~~G~~~~~~~~~~~~~-g~~~~~~DPdG~~iel~~~~  145 (148)
T 2r6u_A           99 ESIESALERIESLGGKTVTGRTPVGNM-GFAAYFTDSEGNVVGLWETA  145 (148)
T ss_dssp             SCHHHHHHHHHHTTCEEEEEEEEETTT-EEEEEEECTTSCEEEEEEEC
T ss_pred             CCHHHHHHHHHHcCCeEecCCeecCCC-EEEEEEECCCCCEEEEEecC
Confidence            999999999999999999888777632 58999999999999999864

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=99.44  E-value=5.3e-13  Score=110.74  Aligned_cols=105  Identities=18%  Similarity=0.252  Sum_probs=77.5

Q ss_pred             CCceeceeeecCHHHHHHHhhhcceEEeeeccC-----------------------------CCccEEEEEEe--CCcc-
Q 018138          243 EPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPE-----------------------------DKNAVLELTYN--HGVT-  290 (360)
Q Consensus       243 ~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~-----------------------------~~~~~l~l~~~--~~~~-  290 (360)
                      .+++|+.|.|+|++++.+||+++     ||+..                             +....+++...  .... 
T Consensus        10 ~~i~hv~l~v~D~~~a~~FY~~l-----G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~   84 (153)
T 1ss4_A           10 LRMDNVSIVVESLDNAISFFEEI-----GLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFLTPPTIA   84 (153)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHH-----TCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEEEESCCCC
T ss_pred             cceeeEEEEeCCHHHHHHHHHHC-----CCEEEeeccCCcchhheeeCCCCCcEEEEEEECCCCCcEEEEEEecCCCCcc
Confidence            47899999999999999999962     44321                             01123444321  1110 


Q ss_pred             ----cccCCCCeeEEEEEeCCHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCc
Q 018138          291 ----EYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  353 (360)
Q Consensus       291 ----~~~~g~g~~hiaf~V~Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  353 (360)
                          ....+.+++|++|.|+|+++++++|+++|+++..+|...+++ .+.+||+||||+.|||++..
T Consensus        85 ~~~~~~~~~~g~~hl~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~  150 (153)
T 1ss4_A           85 DHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENS-YRLCYIRGVEGILIGLAEEL  150 (153)
T ss_dssp             BCTTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETTT-EEEEEEECGGGCEEEEEEEC
T ss_pred             cccCCCCCCCceEEEEEEeCCHHHHHHHHHHCCCeecCCCcccCCc-eEEEEEECCCCCEEEEEecc
Confidence                011234678999999999999999999999999888766653 68899999999999999864

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=99.44  E-value=2.9e-13  Score=110.21  Aligned_cols=104  Identities=18%  Similarity=0.296  Sum_probs=73.9

Q ss_pred             CCceeceeeecCHHHHHHHhhhcceEEeeeccCCC--c--cEEEEEEeCCc--------ccccCCCCeeEEEEEeCCHHH
Q 018138          243 EPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK--N--AVLELTYNHGV--------TEYDKGNGYAQIAIGTDDVYK  310 (360)
Q Consensus       243 ~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~--~--~~l~l~~~~~~--------~~~~~g~g~~hiaf~V~Dl~~  310 (360)
                      ..|.|+.|.|+|++++++||++     |||+....  .  ....+....+.        .......+.+|++|.|+|+++
T Consensus         5 ~~i~hv~l~v~D~~~a~~FY~~-----LG~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~l~f~v~dvd~   79 (128)
T 3g12_A            5 LLITSITINTSHLQGMLGFYRI-----IGFQFTASKVDKGSEVHRAVHNGVEFSLYSIQNPQRSQIPSLQLGFQITDLEK   79 (128)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHH-----HTCCCEEC-----CCEEEEEETTEEEEEEECCCCSSCCCCSEEEEEEESCHHH
T ss_pred             ceEEEEEEEcCCHHHHHHHHHH-----CCCEEecccCCCCCEEEEEeCCCeEEEEEECCCCcCCCCCceEEEEEeCCHHH
Confidence            3688999999999999999995     66654221  0  12222211110        011122356889999999999


Q ss_pred             HHHHHHHcCCe-EeeCCcccCCCCcEEEEEECCCCCeEEEEcCc
Q 018138          311 TAEAIKLSGGK-ITREPGPLPGINTKITACLDPDGWKSVFVDNL  353 (360)
Q Consensus       311 ~~~~l~~~G~~-i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  353 (360)
                      ++++++++|++ +..+|...+++ .+ ++|+|||||.|+|.+.+
T Consensus        80 ~~~~l~~~G~~~~~~~p~~~~~G-~~-~~~~DPdGn~iel~~~~  121 (128)
T 3g12_A           80 TVQELVKIPGAMCILDPTDMPDG-KK-AIVLDPDGHSIELCELE  121 (128)
T ss_dssp             HHHHHTTSTTCEEEEEEEECC-C-EE-EEEECTTCCEEEEEC--
T ss_pred             HHHHHHHCCCceeccCceeCCCc-cE-EEEECCCCCEEEEEEec
Confidence            99999999999 88888777764 34 99999999999999875

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=99.43  E-value=1.6e-13  Score=112.87  Aligned_cols=106  Identities=14%  Similarity=0.150  Sum_probs=79.4

Q ss_pred             CCCceeceeeecCHHHHHHHhhhcceEEeeeccCCC-ccEEEEEE----e------------CCcccccCCCCeeEEEEE
Q 018138          242 PEPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK-NAVLELTY----N------------HGVTEYDKGNGYAQIAIG  304 (360)
Q Consensus       242 ~~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~-~~~l~l~~----~------------~~~~~~~~g~g~~hiaf~  304 (360)
                      ..++.|+.|.|+|++++.+||++    +|||+.... ...+.+..    .            ........+.+.+|++|.
T Consensus         6 ~~~l~~v~l~v~D~~~a~~FY~~----~LG~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (141)
T 2qnt_A            6 GMRFVNPIPFVRDINRSKSFYRD----RLGLKILEDFGSFVLFETGFAIHEGRSLEETIWRTSSDAQEAYGRRNMLLYFE   81 (141)
T ss_dssp             SCCCCCCCCEESCHHHHHHHHHH----TTCCCEEEECSSEEEETTSCEEEEHHHHHHHHHSCCC--CCCSCCSSCEEEEE
T ss_pred             ccccceEEEEECCHHHHHHHHHH----hcCCEEEEEcCCcEEEeccceeccCchhhhhccccCCccccccCCCceEEEEE
Confidence            35789999999999999999999    999975321 11222210    0            000001234578899999


Q ss_pred             eCCHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCc
Q 018138          305 TDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  353 (360)
Q Consensus       305 V~Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  353 (360)
                      |+|++++++++++ |+++..+|.+.+++ .+.++++|||||.|||++..
T Consensus        82 v~dv~~~~~~l~~-G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~  128 (141)
T 2qnt_A           82 HADVDAAFQDIAP-HVELIHPLERQAWG-QRVFRFYDPDGHAIEVGESL  128 (141)
T ss_dssp             ESCHHHHHC-CGG-GSCEEEEEEECTTS-CEEEEEECTTCCEEEEEECC
T ss_pred             eCcHHHHHHHHHc-CCccccCCccCCCC-CEEEEEECCCCCEEEEEecc
Confidence            9999999999999 99999888877764 58999999999999999874

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=99.43  E-value=9.6e-14  Score=117.37  Aligned_cols=110  Identities=15%  Similarity=0.114  Sum_probs=80.5

Q ss_pred             CCCceeceeeecCHHHHHHHhhhcceEEeeeccCCC--ccEEEEEE---------eCCcc------cc--cCCCCeeEEE
Q 018138          242 PEPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK--NAVLELTY---------NHGVT------EY--DKGNGYAQIA  302 (360)
Q Consensus       242 ~~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~--~~~l~l~~---------~~~~~------~~--~~g~g~~hia  302 (360)
                      ..+++|+.|.|+|++++++||++    +|||+....  .....+..         .....      ..  ..+.+..|++
T Consensus         6 i~~l~hv~l~v~Dl~~a~~FY~~----vLG~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~hi~   81 (160)
T 3r4q_A            6 PSAIMETALYADDLDAAEAFYRD----VFGLEMVLKLPGQLVFFKCGRQMLLLFDPQESSRADANNPIPRHGAVGQGHFC   81 (160)
T ss_dssp             CSCEEEEEEECSCHHHHHHHHHH----HSCCEEEEEETTTEEEEEETTEEEEEECHHHHTCCCTTCCSCCCEEEEECEEE
T ss_pred             cccccEEEEEeCCHHHHHHHHHH----hcCCEEEEecCCcEEEEeCCCEEEEEEecCCccCccccCCCCcCCCcceeEEE
Confidence            46899999999999999999999    999975321  11111111         00000      00  1124679999


Q ss_pred             EEe---CCHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCccccc
Q 018138          303 IGT---DDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFLK  357 (360)
Q Consensus       303 f~V---~Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~  357 (360)
                      |.|   +|+++++++|+++|+++..++.. +++ ++.+||+|||||.|||++...+.-
T Consensus        82 f~V~~~~dld~~~~~l~~~G~~~~~~~~~-~~g-~~~~~~~DPdG~~iel~~~~~~~~  137 (160)
T 3r4q_A           82 FYADDKAEVDEWKTRFEALEIPVEHYHRW-PNG-SYSVYIRDPAGNSVEVGEGKLWGF  137 (160)
T ss_dssp             EEESSHHHHHHHHHHHHTTTCCCCEEEEC-TTS-CEEEEEECTTCCEEEEEEGGGGTC
T ss_pred             EEeCCHHHHHHHHHHHHHCCCEEeccccc-cCC-cEEEEEECCCCCEEEEEeCCCCCc
Confidence            999   89999999999999998865533 333 789999999999999999876643

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.43  E-value=7e-13  Score=126.80  Aligned_cols=128  Identities=18%  Similarity=0.287  Sum_probs=93.5

Q ss_pred             cccceeEEEEEEeC--CHHHHHHHHHHhcCCEEEEEeeC--CCCCeEEEEEeeCCCCceEEEEEEecCCCC-CC------
Q 018138          110 SDKRRMLHVVYRVG--DLDKTIKFYTECLGMKLLRKRDI--PEDRYTNAFLGYGPEDSHFVVELTYNYGVD-KY------  178 (360)
Q Consensus       110 ~~~~~l~HV~l~V~--Dle~a~~FY~~vLG~~~~~~~~~--~~~~~~~~~l~~g~~~~~~~lel~~~~~~~-~~------  178 (360)
                      +++++|+||++.|+  |++++.+||+++|||++....+.  +.......++..+++  ...|++.+..... ..      
T Consensus       154 ~~~~~l~Hv~l~V~~~D~~~~~~FY~~vLGf~~~~~~~~~~~~~~~~~~~l~~~~g--~~~l~l~~~~~~~~~~~~~~~~  231 (357)
T 2r5v_A          154 VDLLGIDHFAICLNAGDLGPTVEYYERALGFRQIFDEHIVVGAQAMNSTVVQSASG--AVTLTLIEPDRNADPGQIDEFL  231 (357)
T ss_dssp             CCCCEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEEEEEETTEEEEEEEEECTTS--CCEEEEEEECTTSBCCHHHHHH
T ss_pred             CCcceEeEEEEEEchhhHHHHHHHHHHhcCCcEEEEEeeccCCcceEEEEEECCCC--CEEEEEeeecCCCCCchhHHHH
Confidence            56899999999999  99999999999999999864321  222234566765432  3467776543211 00      


Q ss_pred             --cCCCcceEEEEEECCHHHHHHHHHHcCCeEecCCeecC---------CCC-------EEEEEEECCCCCEEEEeecC
Q 018138          179 --DIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVK---------GGN-------TVIAFIEDPDGYKFELLERG  239 (360)
Q Consensus       179 --~~g~g~~hi~f~V~Dld~~~~rL~~~G~~~~~~p~~~~---------~g~-------~~~~~~~DPdG~~iEl~~~~  239 (360)
                        ..+.|++|++|.|+|+++++++|+++|+++...|....         .+.       ..++|++||||+++||++.+
T Consensus       232 ~~~~~~g~~Hiaf~v~Di~~~~~~L~~~Gv~~~~~p~~yy~~~~~r~~~~~~~~~~~~~~~~l~~~Dp~G~llqi~t~~  310 (357)
T 2r5v_A          232 KDHQGAGVQHIAFNSNDAVRAVKALSERGVEFLKTPGAYYDLLGERITLQTHSLDDLRATNVLADEDHGGQLFQIFTAS  310 (357)
T ss_dssp             HHHTSSEEEEEEEECSCHHHHHHHHHHTTCCBCCCCHHHHHTTTTTCCCSSSCHHHHHHHTCEEEEETTEEEEEEEBCC
T ss_pred             HhcCCCCccEEEEEcCCHHHHHHHHHHcCCCcCCCchhHHHHHHHhhccchhhHHHHHHcCeEEecCCCceEEEEEccC
Confidence              13568999999999999999999999999887764321         010       02589999999999999854

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=99.42  E-value=5.9e-13  Score=110.82  Aligned_cols=110  Identities=22%  Similarity=0.308  Sum_probs=80.3

Q ss_pred             CCCCCCceeceeeecCHHHHHHHh---hhcceEEeeeccCCC----------ccEEEEEEeCCc---cccc-CCCCeeEE
Q 018138          239 GPTPEPLCQVMLRVGDLDRAINFY---KKYTIAVMGYGPEDK----------NAVLELTYNHGV---TEYD-KGNGYAQI  301 (360)
Q Consensus       239 ~~~~~~i~hv~L~V~D~e~a~~FY---~~~~~~~lG~~~~~~----------~~~l~l~~~~~~---~~~~-~g~g~~hi  301 (360)
                      .....++.|+.|.|+|++++.+||   ++    +|||+....          ...+++......   .... ...+..|+
T Consensus        15 ~~~~~~i~hv~l~v~Dl~~a~~FY~~~~~----~LG~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~g~~hi   90 (146)
T 3ct8_A           15 LYFQGMLHHVEINVDHLEESIAFWDWLLG----ELGYEDYQSWSRGKSYKHGKTYLVFVQTEDRFQTPTFHRKRTGLNHL   90 (146)
T ss_dssp             TTTTTSCCEEEEEESCHHHHHHHHHHHHH----HTTCEEEEEETTEEEEEETTEEEEEEECCGGGSCSCCCTTSSSCCEE
T ss_pred             cccccceeEEEEEeCCHHHHHHHHHhhhh----hCCCEEEEecCCCceEecCCeEEEEEEcCCCcccccccccCCCceEE
Confidence            344679999999999999999999   88    888874321          112333322110   0111 23577999


Q ss_pred             EEEeC---CHHHHHHHHHHcCCeEee-CCcccCCC-CcEEEEEECCCCCeEEEEcC
Q 018138          302 AIGTD---DVYKTAEAIKLSGGKITR-EPGPLPGI-NTKITACLDPDGWKSVFVDN  352 (360)
Q Consensus       302 af~V~---Dl~~~~~~l~~~G~~i~~-~p~~~~~~-~~~~~~~~DPdG~~iel~~~  352 (360)
                      +|.|+   |+++++++|+++|+++.. +|.+.+.+ ..+.+||+|||||.|||+++
T Consensus        91 ~f~v~~~~dv~~~~~~l~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~p  146 (146)
T 3ct8_A           91 AFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYAVFCEDPNRIKVEIVAP  146 (146)
T ss_dssp             EEECSCHHHHHHHHHHHHHHTCCBCCTTTTTCTTCTTCCEEEEECTTCCEEEEECC
T ss_pred             EEECCCHHHHHHHHHHHHHcCCccccCCCccccCCCceEEEEEECCCCCEEEEEeC
Confidence            99998   999999999999999988 46554432 35789999999999999863

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=99.42  E-value=5.1e-13  Score=110.03  Aligned_cols=104  Identities=18%  Similarity=0.187  Sum_probs=78.1

Q ss_pred             CceeceeeecCHHHHHHHhhhcceEEeeeccCC---CccEEEEEE-------eC-------Ccccc--cCCCCeeEEEEE
Q 018138          244 PLCQVMLRVGDLDRAINFYKKYTIAVMGYGPED---KNAVLELTY-------NH-------GVTEY--DKGNGYAQIAIG  304 (360)
Q Consensus       244 ~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~---~~~~l~l~~-------~~-------~~~~~--~~g~g~~hiaf~  304 (360)
                      ++.|+.|.|+|++++.+||++    +|||+...   ......+..       ..       .....  ..+++ .|++|.
T Consensus         8 ~i~hv~l~v~D~~~a~~FY~~----~lG~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~-~~~~f~   82 (141)
T 2rbb_A            8 DLSYVNIFTRDIVAMSAFYQQ----VFGFQEIESIRSPIFRGLDTGKSCIGFNAHEAYELMQLAQFSETSGIK-FLLNFD   82 (141)
T ss_dssp             EEEEEEEECSCHHHHHHHHHH----HHCCEECGGGCBTTEEEEECSSSEEEEECTHHHHHTTCGGGCCCBSCC-EEEEEE
T ss_pred             cccEEEEEECCHHHHHHHHHH----hcCCeeecccCCCceEEeecCCEEEEEcCccccccccccccCCCCCCe-EEEEEE
Confidence            789999999999999999999    99997532   111111211       00       00011  12334 599999


Q ss_pred             eC---CHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCc
Q 018138          305 TD---DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  353 (360)
Q Consensus       305 V~---Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  353 (360)
                      |+   |+++++++|+++|+++..+|...+++ .+.+||+|||||.|||++..
T Consensus        83 v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~  133 (141)
T 2rbb_A           83 VDTKEAVDKLVPVAIAAGATLIKAPYETYYH-WYQAVLLDPERNVFRINNVL  133 (141)
T ss_dssp             CSCHHHHHHHHHHHHHTTCEEEEEEEECTTS-EEEEEEECTTSCEEEEEEEC
T ss_pred             cCCHHHHHHHHHHHHHcCCeEecCccccCCc-cEEEEEECCCCCEEEEEEcc
Confidence            98   59999999999999999888777654 78999999999999999864

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=99.42  E-value=4e-13  Score=109.91  Aligned_cols=104  Identities=19%  Similarity=0.239  Sum_probs=76.9

Q ss_pred             CCceeceeeecCHHHHHHHhhhcceEEeeeccCCC---------------ccEEEEEEeCCcc--cc-cCCCCeeEEEEE
Q 018138          243 EPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK---------------NAVLELTYNHGVT--EY-DKGNGYAQIAIG  304 (360)
Q Consensus       243 ~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~---------------~~~l~l~~~~~~~--~~-~~g~g~~hiaf~  304 (360)
                      .++.|+.|.|+|++++.+||++    +|||+....               ...+++.......  .. ..+.+.+|++|.
T Consensus         4 ~~i~hv~l~v~Dl~~a~~FY~~----~lG~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~g~~h~~f~   79 (136)
T 2rk0_A            4 SGVSHVSLTVRDLDISCRWYTE----ILDWKELVRGRGDTTSFAHGVLPGGLSIVLREHDGGGTDLFDETRPGLDHLSFS   79 (136)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHH----HHCCEEEEEEECSSEEEEEEECTTSCEEEEEEETTCSSSCCCTTSSEEEEEEEE
T ss_pred             CcccEEEEEeCCHHHHHHHHHH----hcCCEEEeeccCCCCceEEEEEcCCCEEEEEeCCCCcccCCCCCCCCcceEEEE
Confidence            3688999999999999999998    888864211               1122332221110  01 134578999999


Q ss_pred             e---CCHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCc
Q 018138          305 T---DDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  353 (360)
Q Consensus       305 V---~Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  353 (360)
                      |   +|+++++++|+++|+++. ++.+.+.  ++.+||+|||||.|||++..
T Consensus        80 v~~~~d~~~~~~~l~~~G~~~~-~~~~~~~--g~~~~~~DPdG~~iel~~~~  128 (136)
T 2rk0_A           80 VESMTDLDVLEERLAKAGAAFT-PTQELPF--GWILAFRDADNIALEAMLGR  128 (136)
T ss_dssp             ESSHHHHHHHHHHHHHHTCCBC-CCEEETT--EEEEEEECTTCCEEEEEEEC
T ss_pred             eCCHHHHHHHHHHHHHCCCccc-CccccCC--ceEEEEECCCCCEEEEEEcC
Confidence            9   899999999999999987 4544454  48999999999999999864

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=99.42  E-value=5.9e-13  Score=108.85  Aligned_cols=100  Identities=23%  Similarity=0.306  Sum_probs=76.4

Q ss_pred             CceeceeeecCHHHHHHHhhhcceEEeeeccCCC----------ccEEEEEEeCCcccccCCCCeeEEEEEeC--CHHHH
Q 018138          244 PLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK----------NAVLELTYNHGVTEYDKGNGYAQIAIGTD--DVYKT  311 (360)
Q Consensus       244 ~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~----------~~~l~l~~~~~~~~~~~g~g~~hiaf~V~--Dl~~~  311 (360)
                      +++|+.|.|+|++++.+||++    +|||+....          +..+.+......  .....+..|++|.|+  |++++
T Consensus         4 ~i~hv~l~v~D~~~a~~FY~~----~lG~~~~~~~~~~~~~~~~~~~l~l~~~~~~--~~~~~~~~h~~~~v~~~d~~~~   77 (135)
T 1nki_A            4 GLNHLTLAVADLPASIAFYRD----LLGFRLEARWDQGAYLELGSLWLCLSREPQY--GGPAADYTHYAFGIAAADFARF   77 (135)
T ss_dssp             EEEEEEEEESCHHHHHHHHHH----TTCCEEEEEETTEEEEEETTEEEEEEECTTC--CCCCSSSCEEEEEECHHHHHHH
T ss_pred             eEeEEEEEeCCHHHHHHHHHH----hcCCEEEEcCCCceEEecCCEEEEEEeCCCC--CCCCCCcceEEEEccHHHHHHH
Confidence            688999999999999999999    999975321          111222211100  122357889999997  99999


Q ss_pred             HHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCc
Q 018138          312 AEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  353 (360)
Q Consensus       312 ~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  353 (360)
                      +++++++|+++..++..  +  ++.+|++|||||.|||++..
T Consensus        78 ~~~l~~~G~~~~~~~~~--~--~~~~~~~DPdG~~iel~~~~  115 (135)
T 1nki_A           78 AAQLRAHGVREWKQNRS--E--GDSFYFLDPDGHRLEAHVGD  115 (135)
T ss_dssp             HHHHHHTTCCEEECCCS--S--SCEEEEECTTCCEEEEESCC
T ss_pred             HHHHHHCCCceecCCCC--C--eEEEEEECCCCCEEEEEECC
Confidence            99999999999887642  2  57899999999999999874

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=99.42  E-value=3.9e-13  Score=110.46  Aligned_cols=105  Identities=16%  Similarity=0.106  Sum_probs=75.1

Q ss_pred             CceeceeeecCHHHHHHHhhhcceEEeeeccCCC---cc-E----EEEEEeCCccc---cc--CCCCeeEEEEEeC--CH
Q 018138          244 PLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK---NA-V----LELTYNHGVTE---YD--KGNGYAQIAIGTD--DV  308 (360)
Q Consensus       244 ~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~---~~-~----l~l~~~~~~~~---~~--~g~g~~hiaf~V~--Dl  308 (360)
                      +++|+.|.|+|++++.+||++    +|||+....   .. .    ..+........   .+  +..+..|++|.|+  |+
T Consensus         4 ~i~hv~l~v~D~~~a~~FY~~----~LG~~~~~~~~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~~h~~~~v~~~d~   79 (139)
T 1r9c_A            4 GLSHMTFIVRDLERMTRILEG----VFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQGEKLAERSYNHIAFKIDDADF   79 (139)
T ss_dssp             EEEEEEEEESCHHHHHHHHHH----HHCCEEEEEGGGSTTCCSCEEEEEETTEEEEEEECCCCSSCCSCEEEEECCGGGH
T ss_pred             eEEEEEEEeCCHHHHHHHHHH----hhCCEEeecCCCccccccceEEEEECCEEEEEEeCCCCCCCCeeEEEEEcCHHHH
Confidence            589999999999999999999    899874211   11 0    01111100000   01  1457899999998  99


Q ss_pred             HHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCc
Q 018138          309 YKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  353 (360)
Q Consensus       309 ~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  353 (360)
                      ++++++++++|+++..+|...+++ ++.+||+|||||.|||++..
T Consensus        80 ~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~~DPdG~~iel~~~~  123 (139)
T 1r9c_A           80 DRYAERVGKLGLDMRPPRPRVEGE-GRSIYFYDDDNHMFELHTGT  123 (139)
T ss_dssp             HHHHHHHHHHTCCBCCCCC------CCEEEEECTTSCEEEEECCC
T ss_pred             HHHHHHHHHCCCcccCCcccCCCC-eEEEEEECCCCCEEEEEeCC
Confidence            999999999999998876655543 68899999999999999853

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=99.42  E-value=2.3e-13  Score=113.30  Aligned_cols=101  Identities=23%  Similarity=0.277  Sum_probs=75.7

Q ss_pred             ceeeecCHHHHHHHhhhcceEEeeeccCCC----ccEEEEEEeC------CcccccCCCCeeEEEEEeCCHHHHHHHHHH
Q 018138          248 VMLRVGDLDRAINFYKKYTIAVMGYGPEDK----NAVLELTYNH------GVTEYDKGNGYAQIAIGTDDVYKTAEAIKL  317 (360)
Q Consensus       248 v~L~V~D~e~a~~FY~~~~~~~lG~~~~~~----~~~l~l~~~~------~~~~~~~g~g~~hiaf~V~Dl~~~~~~l~~  317 (360)
                      +.|.|+|++++++||++    +|||+....    ...+.+....      +........+..|++|.|+|+++++++|++
T Consensus        10 i~l~v~Dl~~a~~FY~~----vLG~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~hl~f~V~d~d~~~~~l~~   85 (144)
T 3r6a_A           10 SRLYVADLNPALEFYEE----LLETPVAMRFEIPQTGVELAQISTILLIAGSEEALKPFRNTQATFLVDSLDKFKTFLEE   85 (144)
T ss_dssp             EEEEESCHHHHHHHHHH----HTTCCCCEECCCSCSSCEEEEETTEEEEESCHHHHGGGGGCCEEEEESCHHHHHHHHHH
T ss_pred             EEEEECCHHHHHHHHHH----hcCCEEEEEeccCCccEEEEEeccEEEecCCcccCCCCcceEEEEEeCCHHHHHHHHHH
Confidence            88999999999999999    999875321    1111111111      111111123458999999999999999999


Q ss_pred             cCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCcc
Q 018138          318 SGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  354 (360)
Q Consensus       318 ~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  354 (360)
                      +|+++..+|.+.++  ++.+||+|||||.|||++...
T Consensus        86 ~G~~v~~~p~~~~~--G~~~~~~DPdG~~iel~~~~~  120 (144)
T 3r6a_A           86 NGAEIIRGPSKVPT--GRNMTVRHSDGSVIEYVEHSK  120 (144)
T ss_dssp             TTCEEEEEEEEETT--EEEEEEECTTSCEEEEEEECC
T ss_pred             cCCEEecCCccCCC--ceEEEEECCCCCEEEEEEcCC
Confidence            99999998887777  488999999999999998753

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0

Probab=99.41  E-value=4.2e-13  Score=109.84  Aligned_cols=106  Identities=15%  Similarity=0.139  Sum_probs=73.3

Q ss_pred             ceeceeeecCHHHHHHHhhhcceEEeeeccCCC----------ccEEEEEEeCCcccccCCCCeeEEEEEeCCHHHHHHH
Q 018138          245 LCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK----------NAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEA  314 (360)
Q Consensus       245 i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~----------~~~l~l~~~~~~~~~~~g~g~~hiaf~V~Dl~~~~~~  314 (360)
                      -.+..|.|+|++++++||++    +|||+....          ...+.+....+....+.+.+..|++|.|+|+++++++
T Consensus         8 ~~~~~l~v~D~~~a~~FY~~----~LG~~~~~~~~~~~~l~~~~~~l~l~~~~~~~~~~~~~~~~~l~~~v~dv~~~~~~   83 (134)
T 3fcd_A            8 QITPFLHIPDMQEALTLFCD----TLGFELKYRHSNYAYLELSGCGLRLLEEPARKIIPDGIARVAICIDVSDIDSLHTK   83 (134)
T ss_dssp             EEEEEEEESCHHHHHHHHTT----TTCCEEEEEETTEEEEEETTEEEEEEECCCC---------EEEEEECSCHHHHHHH
T ss_pred             cceeEEEECCHHHHHHHHHh----ccCcEEEEeCCCeEEEEECCEEEEEEeCCCCCcCCCCCceEEEEEEeCCHHHHHHH
Confidence            34567999999999999999    999875321          1222222222111112223457999999999999999


Q ss_pred             HHHcC----CeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCccc
Q 018138          315 IKLSG----GKITREPGPLPGINTKITACLDPDGWKSVFVDNLDF  355 (360)
Q Consensus       315 l~~~G----~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  355 (360)
                      ++++|    +++..+|...+++ .+.++|+|||||.|||.+....
T Consensus        84 l~~~g~~~g~~i~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~~~  127 (134)
T 3fcd_A           84 LSPALENLPADQVEPLKNMPYG-QREFQVRMPDGDWLNFTAPLAE  127 (134)
T ss_dssp             HHHHHTTSCGGGEEEEEECTTS-EEEEEEECTTSCEEEEEEECCT
T ss_pred             HHhcCCccCCccccCCcccCCC-cEEEEEECCCCCEEEEEEcccc
Confidence            99654    5677777766664 5899999999999999987643

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A

Probab=99.41  E-value=5.3e-13  Score=107.66  Aligned_cols=103  Identities=14%  Similarity=0.049  Sum_probs=76.9

Q ss_pred             ceeceeeecCHHHHHHHhhhcceEEeeeccCCC-ccEEEEEEeCCccc---c--cCCCCeeEEEEEeCCHHHHHHHHHHc
Q 018138          245 LCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK-NAVLELTYNHGVTE---Y--DKGNGYAQIAIGTDDVYKTAEAIKLS  318 (360)
Q Consensus       245 i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~-~~~l~l~~~~~~~~---~--~~g~g~~hiaf~V~Dl~~~~~~l~~~  318 (360)
                      ..|+.|.|+|++++.+||++    +|||+.... .....+........   .  ....+.+|++|.|+|+++++++++++
T Consensus         6 ~~~~~l~v~D~~~a~~FY~~----~lG~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~v~dv~~~~~~l~~~   81 (124)
T 1xrk_A            6 SAVPVLTARDVAEAVEFWTD----RLGFSRVFVEDDFAGVVRDDVTLFISAVQDQVVPDNTQAWVWVRGLDELYAEWSEV   81 (124)
T ss_dssp             EEEEEEEESCHHHHHHHHHH----TTCCEEEEECSSEEEEEETTEEEEEEECSCTTTGGGCEEEEEEECHHHHHHHHTTT
T ss_pred             ceeEEEEcCCHHHHHHHHHH----ccCceEEecCCCEEEEEECCEEEEEEcCCCCCCCCceEEEEEECCHHHHHHHHHHh
Confidence            46899999999999999999    999975321 12222322110000   0  11234579999999999999999999


Q ss_pred             ------CC--eEeeCCcccCCCCcEEEEEECCCCCeEEEEcCc
Q 018138          319 ------GG--KITREPGPLPGINTKITACLDPDGWKSVFVDNL  353 (360)
Q Consensus       319 ------G~--~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  353 (360)
                            |+  ++..+|...++  ++.++++|||||.|||.+..
T Consensus        82 ~~~~~~G~~~~~~~~~~~~~~--g~~~~~~DPdG~~iel~~~~  122 (124)
T 1xrk_A           82 VSTNFRDASGPAMTEIVEQPW--GREFALRDPAGNCVHFVAEE  122 (124)
T ss_dssp             SBSCTTTCSSCEECCCEEETT--EEEEEEECTTCCEEEEEEC-
T ss_pred             cccccCCccccccCCceecCC--CCEEEEECCCCCEEEEEEec
Confidence                  99  88888887776  48999999999999999863

>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.41  E-value=1.1e-11  Score=103.61  Aligned_cols=126  Identities=15%  Similarity=0.147  Sum_probs=83.4

Q ss_pred             ceeEEEEEEeC-CHHHHHHHHHHhcCCEEEEEeeCCC------------CCeEEEEEeeCCCCceEEEEEEecCCCCCCc
Q 018138          113 RRMLHVVYRVG-DLDKTIKFYTECLGMKLLRKRDIPE------------DRYTNAFLGYGPEDSHFVVELTYNYGVDKYD  179 (360)
Q Consensus       113 ~~l~HV~l~V~-Dle~a~~FY~~vLG~~~~~~~~~~~------------~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~  179 (360)
                      +++ +..|.|. |++++++||+++||+++.......+            +....+.+..+..    .+.+..........
T Consensus         3 m~~-~p~L~v~~d~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~----~l~~~d~~~~~~~~   77 (149)
T 1u6l_A            3 LQI-VPYLIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGSF----ALMASDNHPAYPYE   77 (149)
T ss_dssp             CEE-EEEEEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETTE----EEEEEECCTTSCCC
T ss_pred             ceE-EEEEEECCCHHHHHHHHHHHhCCEEEEEEEcccCCcccCCCcccCCcEEEEEEEECCE----EEEEEcCCCccCCC
Confidence            343 3778998 9999999999999999975432211            2233344544321    23333221110111


Q ss_pred             CCCcceEEEEEECC---HHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCCCCCCce
Q 018138          180 IGTGFGHFGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLC  246 (360)
Q Consensus       180 ~g~g~~hi~f~V~D---ld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~~~~~i~  246 (360)
                      ...| .+++|.|+|   +++++++|+ +|+++..+|...++|.+ +++++||+|+.|+|.+.....++-+
T Consensus        78 ~~~g-~~l~~~v~d~~evd~~~~~l~-~Gg~i~~p~~~~~wG~r-~~~v~Dp~G~~w~l~~~~~~~~~~~  144 (149)
T 1u6l_A           78 GIKG-CSISLNVDSKAEAERLFNALA-EGGSVQMPLGPTFWAAS-FGMFTDRFGVAWMVNCEQDREGGSH  144 (149)
T ss_dssp             CCCS-EEEEEECSSHHHHHHHHHHHH-TTSEEEEEEEEETTEEE-EEEEECTTSCEEEEEESCC------
T ss_pred             CCCc-eEEEEEcCCHHHHHHHHHHHH-CCCEEeecccccCcccc-eEEEECCCCCEEEEEEecccCCCcc
Confidence            2233 589999998   889999985 89999999999888854 6899999999999999776555433

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=99.41  E-value=1e-12  Score=107.07  Aligned_cols=111  Identities=14%  Similarity=0.107  Sum_probs=79.7

Q ss_pred             CCCCceeceeeecCHHHHHHHhhhcceEEeeeccCCC-ccEEEEEEeCCc--------ccccCCCCeeEEEEEeC---CH
Q 018138          241 TPEPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK-NAVLELTYNHGV--------TEYDKGNGYAQIAIGTD---DV  308 (360)
Q Consensus       241 ~~~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~-~~~l~l~~~~~~--------~~~~~g~g~~hiaf~V~---Dl  308 (360)
                      .+.+++|+.|.|+|++++++||++    +|||+.... ..++.+......        ...+...+..|++|.++   |+
T Consensus         6 ~~~~i~hv~l~v~Dl~~a~~FY~~----~LG~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~h~~~~~~~~~d~   81 (135)
T 3rri_A            6 NPNDVFHLAIPARDLDEAYDFYVT----KLGCKLARRYPDRITLDFFGDQLVCHLSDRWDREVSMYPRHFGITFRDKKHF   81 (135)
T ss_dssp             CTTSEEEEEEEESCHHHHHHHHTT----TTCCEEEEEETTEEEEEETTEEEEEEECSCSCSSCCSSSCEEEEECSSHHHH
T ss_pred             CCCccceEEEEcCCHHHHHHHHHH----hcCCEeeccCCCcEEEEEeCCEEEEEEcCcccccCCCCCCeEEEEEcChHhH
Confidence            356899999999999999999999    999975321 122222211000        00112345789999885   59


Q ss_pred             HHHHHHHHHcCCeEeeCCccc--C-CCCcEEEEEECCCCCeEEEEcCccc
Q 018138          309 YKTAEAIKLSGGKITREPGPL--P-GINTKITACLDPDGWKSVFVDNLDF  355 (360)
Q Consensus       309 ~~~~~~l~~~G~~i~~~p~~~--~-~~~~~~~~~~DPdG~~iel~~~~~~  355 (360)
                      ++++++|+++|+++..+|...  . .+..+.+||+|||||.|||++..+.
T Consensus        82 ~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~~DPdGn~iel~~~~~~  131 (135)
T 3rri_A           82 DNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPSNNLLEFKYYFDD  131 (135)
T ss_dssp             HHHHHHHHHTTCCEEEEEEEESTTSTTCEEEEEEECTTCCEEEEEEESSG
T ss_pred             HHHHHHHHHcCCceecCcccccCCCCCceEEEEEECCCCCEEEEEEECCh
Confidence            999999999999998877653  1 2225789999999999999987544

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=99.41  E-value=8.3e-13  Score=108.75  Aligned_cols=103  Identities=19%  Similarity=0.315  Sum_probs=77.5

Q ss_pred             CCceeceeeecCHHHHHHHhhhcceEEeeeccCCC----------ccEEEEEEeCCccc-ccCCCCeeEEEEEeC--CHH
Q 018138          243 EPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK----------NAVLELTYNHGVTE-YDKGNGYAQIAIGTD--DVY  309 (360)
Q Consensus       243 ~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~----------~~~l~l~~~~~~~~-~~~g~g~~hiaf~V~--Dl~  309 (360)
                      .+++|+.|.|+|++++.+||++    +|||+....          +..+.+........ .....+.+|++|.|+  |++
T Consensus         3 ~~i~hv~l~v~D~~~a~~FY~~----~LG~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~hi~~~v~~~d~~   78 (141)
T 1npb_A            3 QSLNHLTLAVSDLQKSVTFWHE----LLGLTLHARWNTGAYLTCGDLWVCLSYDEARQYVPPQESDYTHYAFTVAEEDFE   78 (141)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHT----TSCCEEEEEETTEEEEEETTEEEEEEECTTCCCCCGGGSCSCEEEEECCHHHHH
T ss_pred             ceEEEEEEEeCCHHHHHHHHHh----ccCCEEEeecCCcEEEEECCEEEEEEECCCCCCCCCCCCCceEEEEEeCHHHHH
Confidence            4689999999999999999999    999975321          11222222211100 122357899999996  999


Q ss_pred             HHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCc
Q 018138          310 KTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  353 (360)
Q Consensus       310 ~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  353 (360)
                      +++++++++|+++..++.  ++  ++.+|++|||||.|||++..
T Consensus        79 ~~~~~l~~~G~~~~~~~~--~~--~~~~~~~DPdG~~iel~~~~  118 (141)
T 1npb_A           79 PLSQRLEQAGVTIWKQNK--SE--GASFYFLDPDGHKLELHVGS  118 (141)
T ss_dssp             HHHHHHHHTTCCEEECCC--SS--SEEEEEECTTCCEEEEEECC
T ss_pred             HHHHHHHHCCCeEeccCC--Cc--eeEEEEECCCCCEEEEEECc
Confidence            999999999999988663  22  68999999999999999874

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A

Probab=99.40  E-value=3.7e-12  Score=108.59  Aligned_cols=118  Identities=14%  Similarity=0.111  Sum_probs=78.3

Q ss_pred             eEEEEEEeCC--HHHHHHHHHHhcCCEEEEEee-------CCCCCeEEEEEeeCCCCceEEEEEEecCCC-C-CCcC--C
Q 018138          115 MLHVVYRVGD--LDKTIKFYTECLGMKLLRKRD-------IPEDRYTNAFLGYGPEDSHFVVELTYNYGV-D-KYDI--G  181 (360)
Q Consensus       115 l~HV~l~V~D--le~a~~FY~~vLG~~~~~~~~-------~~~~~~~~~~l~~g~~~~~~~lel~~~~~~-~-~~~~--g  181 (360)
                      -.++.|.|+|  ++++++||+++|||++.....       .+...+..+.+..+.    ..|.+...... . ....  +
T Consensus        25 ~i~~~L~v~D~~~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~g----~~l~l~~~~~~~~~~~~~~~~  100 (166)
T 1xy7_A           25 EFKQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAG----SSFVVCDVSSLPGFSTAKSEG  100 (166)
T ss_dssp             EEEEEEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETT----EEEEEEEGGGSTTCCCCCTTS
T ss_pred             eEEEEEEECCcCHHHHHHHHHHHhCCEEEEEEccCCCCCCCCCCcEEEEEEEECC----eEEEEeCCCcccCCccccCCC
Confidence            3466699999  999999999999999975321       111222234455432    13444332111 0 0111  2


Q ss_pred             CcceEEEEEECCHHHHHHHHHHcCCeEecCCeec--CCCCEEEEEEECCCCCEEEEeecCC
Q 018138          182 TGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPV--KGGNTVIAFIEDPDGYKFELLERGP  240 (360)
Q Consensus       182 ~g~~hi~f~V~Dld~~~~rL~~~G~~~~~~p~~~--~~g~~~~~~~~DPdG~~iEl~~~~~  240 (360)
                      .+ .|++|.|+|+++++++|+++|++ ..+|...  ++ ++ +++|+||+||.|+|++...
T Consensus       101 ~g-~~l~~~vdDvda~~~~l~~~G~~-~~~~~~~~~~~-~r-~~~v~DP~G~~~~l~~~~~  157 (166)
T 1xy7_A          101 SG-VTFLLGTKDAEAAVAKAVDAGAV-KVEVTEAEVEL-GF-KGKVTDPFGVTWIFAEKKT  157 (166)
T ss_dssp             CC-CEEEEECSCHHHHHHHHHHTTCE-ECCCCHHHHHT-TE-EEEEECTTSCEEEEEC---
T ss_pred             Cc-EEEEEEcCCHHHHHHHHHHCCCE-ECCcccccCcc-cE-EEEEECCCCCEEEEEeecC
Confidence            23 48999999999999999999999 8888877  67 44 6999999999999998654

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=99.39  E-value=4.8e-13  Score=110.38  Aligned_cols=107  Identities=15%  Similarity=0.175  Sum_probs=76.9

Q ss_pred             CCCceeceeeecCHHHHHHHhhhcceEEeeeccCCC------c----------------cEEEEEEeCCcc-c-----cc
Q 018138          242 PEPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK------N----------------AVLELTYNHGVT-E-----YD  293 (360)
Q Consensus       242 ~~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~------~----------------~~l~l~~~~~~~-~-----~~  293 (360)
                      ..+++|+.|.|+|++++.+||++    +|||+....      .                ..+++....... .     ..
T Consensus         7 ~~~~~hv~l~v~D~~~a~~FY~~----~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~   82 (148)
T 1jc4_A            7 FICIDHVAYACPDADEASKYYQE----TFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAK   82 (148)
T ss_dssp             CSEEEEEEEECSCHHHHHHHHHH----HHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHH
T ss_pred             cceeeEEEEEeCCHHHHHHHHHH----ccCceeeecccCCCCCeEEEEEEcCCCCcCcceEEEEeecCCCCChHHHHHHh
Confidence            35799999999999999999998    888864211      1                122222211100 0     01


Q ss_pred             CC--CCeeEEEEEeCCHHHHHHHHHHcCCeEee-CCcccCCCCcEEEEE--ECCCCCeEEEEcCc
Q 018138          294 KG--NGYAQIAIGTDDVYKTAEAIKLSGGKITR-EPGPLPGINTKITAC--LDPDGWKSVFVDNL  353 (360)
Q Consensus       294 ~g--~g~~hiaf~V~Dl~~~~~~l~~~G~~i~~-~p~~~~~~~~~~~~~--~DPdG~~iel~~~~  353 (360)
                      .+  .+.+|++|.|+|+++++++|+++|+++.. +|...+++ .+++++  +||||+.|||++..
T Consensus        83 ~~~~~g~~h~~~~v~d~~~~~~~l~~~G~~~~~~~p~~~~~g-~~~~~~~~~DPdG~~iel~~~~  146 (148)
T 1jc4_A           83 HNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGG-NRINFMHPKSGKGVLIELTQYP  146 (148)
T ss_dssp             TTTCCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSS-CEEEEBCGGGGTTSCEEEEECC
T ss_pred             CCCCCceEEEEEECCCHHHHHHHHHHCCCeecCcCcccCCCc-eEEEEEeecCCCcEEEEEEecC
Confidence            23  67899999999999999999999999883 45433332 466777  99999999999864

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=99.39  E-value=6.8e-13  Score=110.35  Aligned_cols=106  Identities=17%  Similarity=0.179  Sum_probs=76.6

Q ss_pred             CCCceeceeeecCHHHHHHHhhhcceEEeeeccCC---C-------ccEEEEEEeCCc---ccccCCCCeeEEEEEeC-C
Q 018138          242 PEPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPED---K-------NAVLELTYNHGV---TEYDKGNGYAQIAIGTD-D  307 (360)
Q Consensus       242 ~~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~---~-------~~~l~l~~~~~~---~~~~~g~g~~hiaf~V~-D  307 (360)
                      ..+++||.|.|+|++++++||++    +|||+...   .       ...+.+......   ......+|..|++|.+. |
T Consensus        25 i~~i~hv~l~v~Dl~~a~~FY~~----vLG~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~~g~~~~~~~~~~d  100 (147)
T 3zw5_A           25 IRRLDHIVMTVKSIKDTTMFYSK----ILGMEVMTFKEDRKALCFGDQKFNLHEVGKEFEPKAAHPVPGSLDICLITEVP  100 (147)
T ss_dssp             CEEEEEEEEEESCHHHHHHHHHH----HHCCEEEEETTTEEEEEETTEEEEEEETTSCCSSCCSSCCTTCCEEEEECSSC
T ss_pred             cccccEEEEEeCCHHHHHHHHHH----hcCCEEEecCCCceEEEECCcEEEEEEcCCCcCcccCCCCCCCceEEEEeccC
Confidence            45899999999999999999999    99997532   1       112222221111   01122346788999885 9


Q ss_pred             HHHHHHHHHHcCCeEeeCCcccCCC--CcEEEEEECCCCCeEEEEc
Q 018138          308 VYKTAEAIKLSGGKITREPGPLPGI--NTKITACLDPDGWKSVFVD  351 (360)
Q Consensus       308 l~~~~~~l~~~G~~i~~~p~~~~~~--~~~~~~~~DPdG~~iel~~  351 (360)
                      +++++++|+++|+++..+|.+..+.  ..+.+||+|||||.|||++
T Consensus       101 l~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdGn~iEl~~  146 (147)
T 3zw5_A          101 LEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDRNLIEVSN  146 (147)
T ss_dssp             HHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEE
T ss_pred             HHHHHHHHHHcCCceeeCcccccCCCCceEEEEEECCCCCEEEEec
Confidence            9999999999999988776543332  2368999999999999986

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=99.39  E-value=1.5e-12  Score=106.86  Aligned_cols=105  Identities=18%  Similarity=0.159  Sum_probs=78.5

Q ss_pred             CCceeceeeecCHHHHHHHhhhcceEEeeeccCCC-------------ccEEEEEEeCC-----cc-cccCCCCeeEEEE
Q 018138          243 EPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK-------------NAVLELTYNHG-----VT-EYDKGNGYAQIAI  303 (360)
Q Consensus       243 ~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~-------------~~~l~l~~~~~-----~~-~~~~g~g~~hiaf  303 (360)
                      .++.|+.|.|+|++++.+||++     |||+....             ...+.+.....     .. ....+.+..|++|
T Consensus         3 ~~l~hv~l~v~D~~~a~~FY~~-----LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~f   77 (138)
T 2a4x_A            3 ARISLFAVVVEDMAKSLEFYRK-----LGVEIPAEADSAPHTEAVLDGGIRLAWDTVETVRSYDPEWQAPTGGHRFAIAF   77 (138)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHT-----TTCCCCGGGGGCSEEEEECTTSCEEEEEEHHHHHHHCTTCCCCBSSCSEEEEE
T ss_pred             ceeeEEEEEECCHHHHHHHHHH-----cCCcEEecCCCCceEEEEcCCCeEEEEecCccchhhCcccCCCCCCCeEEEEE
Confidence            3688999999999999999984     67764321             11222221100     00 0122357899999


Q ss_pred             EeC---CHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCc
Q 018138          304 GTD---DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  353 (360)
Q Consensus       304 ~V~---Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  353 (360)
                      .|+   |+++++++|+++|+++..+|...+++ .+.+||+|||||.|||++..
T Consensus        78 ~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~  129 (138)
T 2a4x_A           78 EFPDTASVDKKYAELVDAGYEGHLKPWNAVWG-QRYAIVKDPDGNVVDLFAPL  129 (138)
T ss_dssp             ECSSHHHHHHHHHHHHHTTCCEEEEEEEETTT-EEEEEEECTTCCEEEEEEEC
T ss_pred             EeCCHHHHHHHHHHHHHCCCceeeCCcccCCC-cEEEEEECCCCCEEEEEeCC
Confidence            999   99999999999999999888777764 58999999999999999876

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A

Probab=99.38  E-value=7.3e-13  Score=106.50  Aligned_cols=103  Identities=14%  Similarity=0.077  Sum_probs=75.6

Q ss_pred             ceeceeeecCHHHHHHHhhhcceEEeeeccCCC-ccEEEEEEeCCcccc-----cCCCCeeEEEEEeCCHHHHHHHHHHc
Q 018138          245 LCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK-NAVLELTYNHGVTEY-----DKGNGYAQIAIGTDDVYKTAEAIKLS  318 (360)
Q Consensus       245 i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~-~~~l~l~~~~~~~~~-----~~g~g~~hiaf~V~Dl~~~~~~l~~~  318 (360)
                      ..++.|.|+|++++.+||++    +|||+.... .....+.........     ....+..|++|.|+|+++++++++++
T Consensus         6 ~~~~~l~v~D~~~a~~FY~~----~LG~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~v~dvd~~~~~l~~~   81 (122)
T 1qto_A            6 GAVPVLTAVDVPANVSFWVD----TLGFEKDFGDRDFAGVRRGDIRLHISRTEHQIVADNTSAWIEVTDPDALHEEWARA   81 (122)
T ss_dssp             CCCCEEEESSHHHHHHHHHH----TTCCEEEEECSSEEEEEETTEEEEEEECSCHHHHTTCEEEEEESCHHHHHHHHTTT
T ss_pred             ceeEEEEcCCHHHHHHHHHh----ccCcEEeeCCCCEEEEEECCEEEEEEcCCCCCCCCceEEEEEECCHHHHHHHHHhh
Confidence            35789999999999999999    999975321 112222211000000     01123479999999999999999999


Q ss_pred             ------CC--eEeeCCcccCCCCcEEEEEECCCCCeEEEEcCc
Q 018138          319 ------GG--KITREPGPLPGINTKITACLDPDGWKSVFVDNL  353 (360)
Q Consensus       319 ------G~--~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  353 (360)
                            |+  ++..+|...++  ++.++++|||||.|+|.+.+
T Consensus        82 ~~~~~~G~~~~~~~~~~~~~~--g~~~~~~DPdG~~iel~~~~  122 (122)
T 1qto_A           82 VSTDYADTSGPAMTPVGESPA--GREFAVRDPAGNCVHFTAGE  122 (122)
T ss_dssp             SCSCTTCTTSCEECCCEEETT--EEEEEEECTTSCEEEEEECC
T ss_pred             ccccccCccccccCCCcCCCC--CcEEEEECCCCCEEEEecCC
Confidence                  99  88888877776  48899999999999999853

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=99.37  E-value=2.3e-12  Score=105.81  Aligned_cols=104  Identities=19%  Similarity=0.258  Sum_probs=71.6

Q ss_pred             CceeceeeecCHHHHHHHhhhcceEEeeeccCCCc------c-----------EEEEEEeCCcccccCCCCeeEEEEEeC
Q 018138          244 PLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDKN------A-----------VLELTYNHGVTEYDKGNGYAQIAIGTD  306 (360)
Q Consensus       244 ~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~~------~-----------~l~l~~~~~~~~~~~g~g~~hiaf~V~  306 (360)
                      .+.++.|.|+|++++++||++    +|||+.....      .           .+++....+......+.+.+|++|.|+
T Consensus        11 ~~~~i~l~v~Dl~~s~~FY~~----~LG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~   86 (139)
T 1twu_A           11 AQIRIARPTGQLDEIIRFYEE----GLCLKRIGEFSQHNGYDGVMFGLPHADYHLEFTQYEGGSTAPVPHPDSLLVFYVP   86 (139)
T ss_dssp             SCEEEEEECSCHHHHHHHHTT----TSCCCEEEEEEEETTEEEEEEESSSSSEEEEEEEETTCCCCCCCCTTCEEEEECC
T ss_pred             ceeEEeeEeCCHHHHHHHHHh----cCCcEEEEeccCCCCeeEEEEecCCCceEEEEeecCCCCCCCCCCCccEEEEEeC
Confidence            457788899999999999998    8998753210      0           122222111111223456789999999


Q ss_pred             CH---HHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCc
Q 018138          307 DV---YKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  353 (360)
Q Consensus       307 Dl---~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  353 (360)
                      |+   ++++++|+++|+++..++.+.....+  .||+|||||.|||++..
T Consensus        87 d~~~l~~~~~~l~~~G~~~~~~~~~~~~~~g--~~~~DPdG~~iel~~~~  134 (139)
T 1twu_A           87 NAVELAAITSKLKHMGYQEVESENPYWSNGG--VTIEDPDGWRIVFMNSK  134 (139)
T ss_dssp             CHHHHHHHHHHHHHTTCCEECCSSHHHHSSE--EEEECTTCCEEEEESSC
T ss_pred             CcchHHHHHHHHHHcCCcCcCCCCcccCCCC--eEEECCCCCEEEEEEcC
Confidence            99   99999999999998833221111113  26999999999999863

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=99.37  E-value=1e-12  Score=103.70  Aligned_cols=100  Identities=18%  Similarity=0.168  Sum_probs=72.8

Q ss_pred             CCceeceeeecCHHHHHHHhhhcceEEeeeccCCC--ccEEEEEEeCCc-cc-----ccCCCCeeEEEEEe---CCHHHH
Q 018138          243 EPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK--NAVLELTYNHGV-TE-----YDKGNGYAQIAIGT---DDVYKT  311 (360)
Q Consensus       243 ~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~--~~~l~l~~~~~~-~~-----~~~g~g~~hiaf~V---~Dl~~~  311 (360)
                      .+++|+.|.|+|++++.+||++    +|||+....  .....+....+. ..     ..+.++.+|++|.|   +|++++
T Consensus         2 ~~i~hv~l~v~D~~~a~~FY~~----~lG~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~v~~~~d~~~~   77 (113)
T 1xqa_A            2 MGIKHLNLTVADVVAAREFLEK----YFGLTCSGTRGNAFAVMRDNDGFILTLMKGKEVQYPKTFHVGFPQESEEQVDKI   77 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHH----HHCCEEEEEETTTEEEEECTTCCEEEEEECSSCCCCTTCCEEEECSSHHHHHHH
T ss_pred             CeeEEEEEEeCCHHHHHHHHHH----hCCCEEeccCCCcEEEEEcCCCcEEEEEeCCCCCCCceeEEEEEcCCHHHHHHH
Confidence            3689999999999999999999    999875321  112222211111 00     01125689999999   889999


Q ss_pred             HHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEE
Q 018138          312 AEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFV  350 (360)
Q Consensus       312 ~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~  350 (360)
                      +++++++|+++. +|.. .+  ++.+|++|||||.|||+
T Consensus        78 ~~~l~~~G~~~~-~p~~-~~--~~~~~~~DPdG~~iel~  112 (113)
T 1xqa_A           78 NQRLKEDGFLVE-PPKH-AH--AYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             HHHHHHTTCCCC-CCEE-C---CEEEEEEETTTEEEEEE
T ss_pred             HHHHHHCCCEEe-cCcC-CC--cEEEEEECCCCcEEEEe
Confidence            999999999975 4543 33  68999999999999986

>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*

Probab=99.35  E-value=3.2e-11  Score=111.36  Aligned_cols=124  Identities=14%  Similarity=0.044  Sum_probs=86.9

Q ss_pred             ccccccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceE
Q 018138          107 WVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGH  186 (360)
Q Consensus       107 ~~~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~h  186 (360)
                      |.........++.+.|.|++++++||+++|||++......+ .  ....+..+.......+.+...+.    ..+....+
T Consensus       176 ~~~~~~~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~  248 (301)
T 2zw5_A          176 AEEPLTTLAVITELPVRDVAATLRLVEAALGARTAFAIGDP-P--EFAEAALTPWSAGPRFRLAAVPG----PGPVEPVR  248 (301)
T ss_dssp             SCCSCEEEEEEEEEEESCHHHHHHHHHHHSCCEEEEEEETT-E--EEEEEESSSSSSSSEEEEEECCC----SSCCCCCE
T ss_pred             hhhhcccceeEEEEEeCCHHHHHHHHHHhcCCeEeeecCCC-c--cEEEEEcCCCccccccccccCCC----cCCCCceE
Confidence            44444455668899999999999999999999997433221 1  22355554311111222222111    11223457


Q ss_pred             EEEEEC-CHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeec
Q 018138          187 FGIAVE-DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (360)
Q Consensus       187 i~f~V~-Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~  238 (360)
                      ++|.|+ |+++++++++++|+++..+|...++|.+ .++|+|||||.|+|.++
T Consensus       249 ~~~~v~~dvd~~~~~~~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~~~~~~~  300 (301)
T 2zw5_A          249 LHLDAAGTADSLHRRAVDAGARVDGPPVRRPWGRS-EFVITLPEGHELTVSAP  300 (301)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCCEEEEEEECTTSCE-EEEEECTTSCEEEEEEC
T ss_pred             EEEEcCccHHHHHHHHHHcCCccccCcccCCCcce-EEEEECCCCCEEEeeCC
Confidence            999999 9999999999999999988888777754 68999999999999874

>1u7i_A Hypothetical protein; structural genomics, PA1358, PSI, PROT structure initiative; HET: MSE; 1.40A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.34  E-value=5.7e-11  Score=97.59  Aligned_cols=118  Identities=16%  Similarity=0.218  Sum_probs=82.0

Q ss_pred             ceeEEEEEEeC--CHHHHHHHHHHhc-CCEEEEEeeCC------CCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCc
Q 018138          113 RRMLHVVYRVG--DLDKTIKFYTECL-GMKLLRKRDIP------EDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTG  183 (360)
Q Consensus       113 ~~l~HV~l~V~--Dle~a~~FY~~vL-G~~~~~~~~~~------~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g  183 (360)
                      +++. ..|.+.  |++++++||+++| |+++.......      ++.+..+.+..+..    .+.+......+....+ .
T Consensus         5 ~~i~-~~L~v~~~d~~~A~~FY~~~f~G~~~~~~~~~~~~~~~~~~~~~~a~~~~~g~----~~~~~~~~~~~~~~~~-~   78 (136)
T 1u7i_A            5 ARVR-PFLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGDQ----SVHCIDSHVRHAFDFT-P   78 (136)
T ss_dssp             CEEE-EEEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETTE----EEEEEEESSCCSCCCC-T
T ss_pred             ccce-EEEEECCCCHHHHHHHHHHHcCCCEeeEEEEcccCCCCCCCcEEEEEEEECCE----EEEEECCCCCCCCCCC-C
Confidence            3454 568886  9999999999999 99997532221      12333444555422    2222222100111112 2


Q ss_pred             ceEEEEEECC---HHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeec
Q 018138          184 FGHFGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (360)
Q Consensus       184 ~~hi~f~V~D---ld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~  238 (360)
                      ...++|.|+|   +++++++|+ +|+++..+|...++|.+ +++++||+|+.|+|..+
T Consensus        79 ~~~l~~~v~d~~evd~~~~~l~-~Gg~v~~p~~~~~~G~~-~~~~~Dp~G~~w~l~~~  134 (136)
T 1u7i_A           79 AFSFFVDCESNAQIERLAEALS-DGGKALMPLGDYGFSQR-FAWLADRFGVSWQLNLA  134 (136)
T ss_dssp             TEEEEEECCCHHHHHHHHHHHH-TTSEEEEEEECCSSSSE-EEEEECTTSCEEEEEEC
T ss_pred             ceEEEEEcCCHHHHHHHHHHHH-cCCEEecccccCCCcce-EEEEECCCCCEEEEEec
Confidence            3579999999   999999999 99999999999998865 58999999999999874

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=99.34  E-value=3.9e-12  Score=102.72  Aligned_cols=104  Identities=19%  Similarity=0.186  Sum_probs=73.9

Q ss_pred             ceeceeeecCHHHHHHHhhhcceEEeeeccCC-CccEEEEEEeCCc------ccccCCCCeeEEEEEeCCHHHHHHHHHH
Q 018138          245 LCQVMLRVGDLDRAINFYKKYTIAVMGYGPED-KNAVLELTYNHGV------TEYDKGNGYAQIAIGTDDVYKTAEAIKL  317 (360)
Q Consensus       245 i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~-~~~~l~l~~~~~~------~~~~~g~g~~hiaf~V~Dl~~~~~~l~~  317 (360)
                      ..++.|.|+|++++.+||++     |||+... ......+......      .......+.+|++|.|+|++++++++++
T Consensus         4 ~~~~~l~v~D~~~a~~FY~~-----LG~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~v~dv~~~~~~l~~   78 (126)
T 1ecs_A            4 QATPNLPSRDFDSTAAFYER-----LGFGIVFRDAGWMILQRGDLMLEFFAHPGLDPLASWFSCCLRLDDLAEFYRQCKS   78 (126)
T ss_dssp             EEEEEEEESCHHHHHHHHHT-----TTCEEEEECSSEEEEEETTEEEEEEECTTCCGGGCCCEEEEEESCHHHHHHHHHH
T ss_pred             cEEEEEEeCCHHHHHHHHHH-----CCCEEEecCCCEEEEEeCCEEEEEEeCCCCCCCCcceEEEEEECCHHHHHHHHHH
Confidence            35788999999999999984     6665321 1112222211000      0011224678999999999999999999


Q ss_pred             cCCeE-------eeCCcccCCCCcEEEEEECCCCCeEEEEcCcc
Q 018138          318 SGGKI-------TREPGPLPGINTKITACLDPDGWKSVFVDNLD  354 (360)
Q Consensus       318 ~G~~i-------~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  354 (360)
                      +|+++       ..+|...+++ .+.++++|||||.|||++...
T Consensus        79 ~G~~~~~~~~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~~  121 (126)
T 1ecs_A           79 VGIQETSSGYPRIHAPELQGWG-GTMAALVDPDGTLLRLIQNEL  121 (126)
T ss_dssp             TTCCBCSSSSSEEEEEEECTTS-SEEEEEECTTSCEEEEEECCC
T ss_pred             CCCccccccCccccCCcccCcc-cEEEEEECCCCCEEEEecchh
Confidence            99994       6777766653 589999999999999998764

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}

Probab=99.32  E-value=3.8e-12  Score=105.35  Aligned_cols=102  Identities=17%  Similarity=0.207  Sum_probs=72.2

Q ss_pred             eeceeeecCHHHHHHHhhhcceEEeeeccCC---C---------ccEEEEEEeCCcc--------cccCCCCeeEEEEEe
Q 018138          246 CQVMLRVGDLDRAINFYKKYTIAVMGYGPED---K---------NAVLELTYNHGVT--------EYDKGNGYAQIAIGT  305 (360)
Q Consensus       246 ~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~---~---------~~~l~l~~~~~~~--------~~~~g~g~~hiaf~V  305 (360)
                      ..+.|.|+|++++++||++    +|||+...   .         ...+.+....+..        ..+.+.++. ++|.|
T Consensus         7 ~~~~l~v~Dl~~s~~FY~~----~LG~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~~~~~~~g~~-~~~~v   81 (145)
T 2rk9_A            7 VVPELYCFDINVSQSFFVD----VLGFEVKYERPDEEFVYLTLDGVDVMLEGIAGKSRKWLSGDLEFPLGSGVN-FQWDV   81 (145)
T ss_dssp             EEEEEEESSHHHHHHHHHH----TTCCEEEEEEGGGTEEEEEETTEEEEEEEC-----------CCSSTTTTEE-EEEEC
T ss_pred             ceEEEEECCHHHHHHHHHh----ccCCEEEeecCCCCEEEEEcCCeEEEEEeccCCCcccccCccccCCCCceE-EEEEE
Confidence            3578999999999999999    99987531   1         1122222210000        012234544 99999


Q ss_pred             CCHHHHHHHHHH-cCCeEeeCCcc-------cCCCCcEEEEEECCCCCeEEEEcCc
Q 018138          306 DDVYKTAEAIKL-SGGKITREPGP-------LPGINTKITACLDPDGWKSVFVDNL  353 (360)
Q Consensus       306 ~Dl~~~~~~l~~-~G~~i~~~p~~-------~~~~~~~~~~~~DPdG~~iel~~~~  353 (360)
                      +|+++++++|++ +|+++..+|..       .+. .++.++|+|||||.|||++..
T Consensus        82 ~dvd~~~~~l~~~~G~~~~~~~~~~~~g~~~~~~-~~~~~~~~DPdG~~iel~~~~  136 (145)
T 2rk9_A           82 IDIEPLYQRVNESAADSIYLALESKSYQCGDSIA-TQKQFMVQTPDGYLFRFCQDI  136 (145)
T ss_dssp             SCHHHHHHHHHHHHGGGEEEEEEEEEC-----CC-EEEEEEEECTTCCEEEEEEC-
T ss_pred             CCHHHHHHHHHhhCCCeEecCccccccccCCCCC-cceEEEEECCCCCEEEEEEcC
Confidence            999999999999 99999887764       222 258899999999999999864

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans}

Probab=99.30  E-value=1.1e-11  Score=102.99  Aligned_cols=104  Identities=10%  Similarity=0.058  Sum_probs=73.9

Q ss_pred             CCceeceeeecCHHHHHHHhhhcceEEeeeccC-----CCccEEEEEEe-----CCcccccCCCCeeE----------EE
Q 018138          243 EPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPE-----DKNAVLELTYN-----HGVTEYDKGNGYAQ----------IA  302 (360)
Q Consensus       243 ~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~-----~~~~~l~l~~~-----~~~~~~~~g~g~~h----------ia  302 (360)
                      .++.|+.|.|+|++++.+||++    +|||+..     +..... +...     .............|          .+
T Consensus        20 ~~~~hv~l~v~D~~~a~~FY~~----~LG~~~~~~~~~~~~~~~-~g~~l~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~   94 (148)
T 3bt3_A           20 VRENGPVYFTKDMDKTVKWFEE----ILGWSGDIVARDDEGFGD-YGCVFDYPSEVAVAHLTPFRGFHLFKGEPIKGVAG   94 (148)
T ss_dssp             EEECCCEEEESCHHHHHHHHHH----TTCCEEEEEEECTTSCEE-EEEEESSCTTTTSCC--CCCSEEEEESCCCSSEEE
T ss_pred             EEeeeEEEEECCHHHHHHHHHh----ccCCEEEeeeecCCCccE-EccEEEEeccCCCcccccccccceeeccCCCccEE
Confidence            4688999999999999999999    9999762     111111 1100     01000001101122          25


Q ss_pred             E-EeCCHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcC
Q 018138          303 I-GTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  352 (360)
Q Consensus       303 f-~V~Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  352 (360)
                      | .|+|+++++++++++|+++..+|...+++ .+.+||+|||||.|||++.
T Consensus        95 ~~~v~dvd~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~  144 (148)
T 3bt3_A           95 FMMIEGIDALHKYVKENGWDQISDIYTQPWG-ARECSITTTDGCILRFFES  144 (148)
T ss_dssp             EEEEECHHHHHHHHHHTTCCCBCCCEEETTT-EEEEEEECTTSCEEEEEEE
T ss_pred             EEEcCCHHHHHHHHHHcCCccccCcccCCCc-cEEEEEECCCCCEEEEeee
Confidence            5 99999999999999999999988777753 5889999999999999985

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.19  E-value=2.1e-10  Score=110.60  Aligned_cols=128  Identities=16%  Similarity=0.245  Sum_probs=91.9

Q ss_pred             cccceeEEEEEEeC--CHHHHHHHHHHhcCCEEEEEee-----CCCCCeEEEEEeeCCCCceEEEEEEecCC--CCC---
Q 018138          110 SDKRRMLHVVYRVG--DLDKTIKFYTECLGMKLLRKRD-----IPEDRYTNAFLGYGPEDSHFVVELTYNYG--VDK---  177 (360)
Q Consensus       110 ~~~~~l~HV~l~V~--Dle~a~~FY~~vLG~~~~~~~~-----~~~~~~~~~~l~~g~~~~~~~lel~~~~~--~~~---  177 (360)
                      .++.+|+||++.|+  |++++.+||+++|||++....+     .+.......++....+  ...|++.++..  ...   
T Consensus       180 ~~~~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~i~~~~~~~~~~~l~~~~g--~v~i~l~~~~~~~~~s~~~  257 (381)
T 1t47_A          180 RTFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTL--KVKFPINEPALAKKKSQID  257 (381)
T ss_dssp             CSCCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTTS--CSEEEEEEECCSSSCCHHH
T ss_pred             CCceEEeEEEEeeccccHHHHHHHHHHhhCCEEeeecCcceeccCCccEEEEEEECCCC--cEEEEEecCCcCCCccHHH
Confidence            46899999999999  9999999999999999976532     2223344455543322  34566665431  111   


Q ss_pred             ----CcCCCcceEEEEEECCHHHHHHHHHHcCCeEecCCeecCC---------CC-------EEEEEEECCCCCEEEEee
Q 018138          178 ----YDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKG---------GN-------TVIAFIEDPDGYKFELLE  237 (360)
Q Consensus       178 ----~~~g~g~~hi~f~V~Dld~~~~rL~~~G~~~~~~p~~~~~---------g~-------~~~~~~~DPdG~~iEl~~  237 (360)
                          ...+.|++||||.|+|+++++++|+++|+++...|...-.         +.       ..+++-+||+|.+++++.
T Consensus       258 ~~l~~~~g~Gv~HiAf~vdDi~~~~~~L~~~Gv~~~~~p~~Yy~~l~~R~~~~~~~~~~l~~~~il~d~d~~g~llqift  337 (381)
T 1t47_A          258 EYLEFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTPDSYYDTLGEWVGDTRVPVDTLRELKILADRDEDGYLLQIFT  337 (381)
T ss_dssp             HHHHHHTSCEEEEEEEECSCHHHHHHHHHHTTCCBCCCCGGGTTSHHHHHCCCSSCHHHHHHHTCEEEECSSCEEEEEEB
T ss_pred             HHHHHhCCCCcceEEEecCCHHHHHHHHHHcCCccCCCCccHHHHHHHhccccchhHHHHHHhCeEEeeCCCCeEEEEec
Confidence                0246689999999999999999999999998887755321         00       114777999999999887


Q ss_pred             cC
Q 018138          238 RG  239 (360)
Q Consensus       238 ~~  239 (360)
                      .+
T Consensus       338 ~~  339 (381)
T 1t47_A          338 KP  339 (381)
T ss_dssp             CC
T ss_pred             cC
Confidence            54

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A

Probab=99.16  E-value=8.7e-11  Score=100.03  Aligned_cols=103  Identities=18%  Similarity=0.140  Sum_probs=73.2

Q ss_pred             ceeceeeecC--HHHHHHHhhhcceEEeeeccCCCc--------------cEEEEEEeCCcc----ccc-----C-C--C
Q 018138          245 LCQVMLRVGD--LDRAINFYKKYTIAVMGYGPEDKN--------------AVLELTYNHGVT----EYD-----K-G--N  296 (360)
Q Consensus       245 i~hv~L~V~D--~e~a~~FY~~~~~~~lG~~~~~~~--------------~~l~l~~~~~~~----~~~-----~-g--~  296 (360)
                      -.+..|.|+|  +++|++||++    +|||+.....              ...++.......    ..+     . .  .
T Consensus        25 ~i~~~L~v~D~~~~~A~~FY~~----vfG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~g~~l~l~~~~~~~~~~~~~~~~  100 (166)
T 1xy7_A           25 EFKQMLLVEAQKVGDAVTFYKS----AFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSFVVCDVSSLPGFSTAKSEG  100 (166)
T ss_dssp             EEEEEEEECTTCHHHHHHHHHH----HHCCEEC---------------CCCEEEEEETTEEEEEEEGGGSTTCCCCCTTS
T ss_pred             eEEEEEEECCcCHHHHHHHHHH----HhCCEEEEEEccCCCCCCCCCCcEEEEEEEECCeEEEEeCCCcccCCccccCCC
Confidence            3578899999  9999999999    9999754210              112222111000    001     1 0  2


Q ss_pred             CeeEEEEEeCCHHHHHHHHHHcCCeEeeCCccc--CCCCcEEEEEECCCCCeEEEEcCcc
Q 018138          297 GYAQIAIGTDDVYKTAEAIKLSGGKITREPGPL--PGINTKITACLDPDGWKSVFVDNLD  354 (360)
Q Consensus       297 g~~hiaf~V~Dl~~~~~~l~~~G~~i~~~p~~~--~~~~~~~~~~~DPdG~~iel~~~~~  354 (360)
                      ..+|++|.|+|+++++++|+++|++ ..+|...  ++  +++++|+||+||.|+|++...
T Consensus       101 ~g~~l~~~vdDvda~~~~l~~~G~~-~~~~~~~~~~~--~r~~~v~DP~G~~~~l~~~~~  157 (166)
T 1xy7_A          101 SGVTFLLGTKDAEAAVAKAVDAGAV-KVEVTEAEVEL--GFKGKVTDPFGVTWIFAEKKT  157 (166)
T ss_dssp             CCCEEEEECSCHHHHHHHHHHTTCE-ECCCCHHHHHT--TEEEEEECTTSCEEEEEC---
T ss_pred             CcEEEEEEcCCHHHHHHHHHHCCCE-ECCcccccCcc--cEEEEEECCCCCEEEEEeecC
Confidence            2359999999999999999999999 9888877  66  799999999999999998754

>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*

Probab=99.16  E-value=3.2e-10  Score=104.63  Aligned_cols=156  Identities=9%  Similarity=0.018  Sum_probs=101.4

Q ss_pred             cceEEEEEEC-CHHHHHHHHHHcCCeEecCCeec--CCCCEEEEEEECCCCCEEEEeecCC---CCCCceeceeeecCHH
Q 018138          183 GFGHFGIAVE-DVAKTVDLVKAKGGKVTREPGPV--KGGNTVIAFIEDPDGYKFELLERGP---TPEPLCQVMLRVGDLD  256 (360)
Q Consensus       183 g~~hi~f~V~-Dld~~~~rL~~~G~~~~~~p~~~--~~g~~~~~~~~DPdG~~iEl~~~~~---~~~~i~hv~L~V~D~e  256 (360)
                      ++..+.+.|. +=.+..+-+++.|.+....-...  ..|.         |-..+++....-   .+....++.|.|.|++
T Consensus       125 g~~~i~~~v~~~N~~s~~ly~k~GF~~~g~~~~~~~~~g~---------d~~~~~l~~~~~~~~~~~~~~~~~l~v~D~~  195 (301)
T 2zw5_A          125 GLDRVEAWIEAGNRRSLAVAARVGLTERARLAQHYPHRPG---------PHEMVVLGKARAEEPLTTLAVITELPVRDVA  195 (301)
T ss_dssp             CCSEEEEEEESSCHHHHHHHHHTTCEEEEEEEECCTTSSS---------CEEEEEEEEESSCCSCEEEEEEEEEEESCHH
T ss_pred             CccEEEEEeCCCCHHHHHHHHHcCCcCcceehhhcccCCC---------CeEEEEEeHHHhhhhcccceeEEEEEeCCHH
Confidence            5667777774 33455667788998865431111  1121         112344443221   2234457889999999


Q ss_pred             HHHHHhhhcceEEeeeccCC-C-c--cEEEEEEeC-C--cc-c--c-c--CCCCeeEEEEEeC-CHHHHHHHHHHcCCeE
Q 018138          257 RAINFYKKYTIAVMGYGPED-K-N--AVLELTYNH-G--VT-E--Y-D--KGNGYAQIAIGTD-DVYKTAEAIKLSGGKI  322 (360)
Q Consensus       257 ~a~~FY~~~~~~~lG~~~~~-~-~--~~l~l~~~~-~--~~-~--~-~--~g~g~~hiaf~V~-Dl~~~~~~l~~~G~~i  322 (360)
                      ++.+||++    +|||+... . .  ....+.... .  .. .  . +  .+....+++|.|+ |+++++++++++|+++
T Consensus       196 ~a~~FY~~----~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dvd~~~~~~~~~G~~~  271 (301)
T 2zw5_A          196 ATLRLVEA----ALGARTAFAIGDPPEFAEAALTPWSAGPRFRLAAVPGPGPVEPVRLHLDAAGTADSLHRRAVDAGARV  271 (301)
T ss_dssp             HHHHHHHH----HSCCEEEEEEETTEEEEEEESSSSSSSSEEEEEECCCSSCCCCCEEEEEEESCHHHHHHHHHHTTCCE
T ss_pred             HHHHHHHH----hcCCeEeeecCCCccEEEEEcCCCccccccccccCCCcCCCCceEEEEEcCccHHHHHHHHHHcCCcc
Confidence            99999999    99997541 1 1  112222211 0  10 1  1 1  1223568999998 9999999999999999


Q ss_pred             eeCCcccCCCCcEEEEEECCCCCeEEEEcC
Q 018138          323 TREPGPLPGINTKITACLDPDGWKSVFVDN  352 (360)
Q Consensus       323 ~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  352 (360)
                      ..+|...+++ .+.++|+|||||.|+|.++
T Consensus       272 ~~~~~~~~~g-~~~~~~~DPdG~~~~~~~~  300 (301)
T 2zw5_A          272 DGPPVRRPWG-RSEFVITLPEGHELTVSAP  300 (301)
T ss_dssp             EEEEEECTTS-CEEEEEECTTSCEEEEEEC
T ss_pred             ccCcccCCCc-ceEEEEECCCCCEEEeeCC
Confidence            9988877754 5899999999999999874

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.15  E-value=1.3e-10  Score=110.98  Aligned_cols=128  Identities=16%  Similarity=0.177  Sum_probs=87.9

Q ss_pred             cccceeEEEEEEeC--CHHHHHHHHHHhcCCEEEEEeeCCCC--CeEEEEEeeCCCCceEEEEEEec-CCCCC-------
Q 018138          110 SDKRRMLHVVYRVG--DLDKTIKFYTECLGMKLLRKRDIPED--RYTNAFLGYGPEDSHFVVELTYN-YGVDK-------  177 (360)
Q Consensus       110 ~~~~~l~HV~l~V~--Dle~a~~FY~~vLG~~~~~~~~~~~~--~~~~~~l~~g~~~~~~~lel~~~-~~~~~-------  177 (360)
                      ..+++|+||++.|+  |++++.+||+++|||++....+.+..  ......+....  ....|++.++ .....       
T Consensus       154 ~~i~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~~~~~~~--g~~~i~L~~~~~~~~~~~~~~~~  231 (357)
T 1cjx_A          154 AGLKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPD--GMIRIPLNEESSKGAGQIEEFLM  231 (357)
T ss_dssp             TSEEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTT--SSCEEEEEEECTTCCSHHHHHHH
T ss_pred             CCeeEECceEEeechhhHHHHHHHHHHhhCCceeeEEEeccCCcceEEEEEECCC--CCEEEEEeeecCCCCChHHHhHH
Confidence            46789999999999  99999999999999999876443221  11112222222  2346777665 22111       


Q ss_pred             CcCCCcceEEEEEECCHHHHHHHHHHcCCeEec-CCeec---------CCCCE-------EEEEEEC----CCCCEEEEe
Q 018138          178 YDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTR-EPGPV---------KGGNT-------VIAFIED----PDGYKFELL  236 (360)
Q Consensus       178 ~~~g~g~~hi~f~V~Dld~~~~rL~~~G~~~~~-~p~~~---------~~g~~-------~~~~~~D----PdG~~iEl~  236 (360)
                      ...+.|++|+||.|+|+++++++|+++|+++.. .|...         ..|..       .+++..|    |+|++++|+
T Consensus       232 ~~~g~g~~HiAf~v~Di~~~~~~L~~~Gv~~~~~~p~~Yy~~l~~r~~~~~~~~~~l~~~~il~d~d~~~~~~g~llqif  311 (357)
T 1cjx_A          232 QFNGEGIQHVAFLTDDLVKTWDALKKIGMRFMTAPPDTYYEMLEGRLPDHGEPVDQLQARGILLDGSSVEGDKRLLLQIF  311 (357)
T ss_dssp             HHTSSBCCEEEEEESCHHHHHHHHHHTTCCBCCCCCHHHHHTHHHHSTTCCCCHHHHHHHTCEEEEEEETTEEEEEEEEE
T ss_pred             hcCCCCeeEEEEEcCCHHHHHHHHHHcCCcccCCCChHHHHHHHHHhccccccHHHHHHcCeEEecCCCCCCCCeEEEEe
Confidence            114568999999999999999999999999887 65211         11111       1366788    889999998


Q ss_pred             ecC
Q 018138          237 ERG  239 (360)
Q Consensus       237 ~~~  239 (360)
                      ..+
T Consensus       312 t~~  314 (357)
T 1cjx_A          312 SET  314 (357)
T ss_dssp             BCC
T ss_pred             ccC
Confidence            754

>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7

Probab=99.11  E-value=1.8e-09  Score=89.24  Aligned_cols=118  Identities=11%  Similarity=0.141  Sum_probs=79.7

Q ss_pred             cceeEEEEEEeCCHHHHHHHHHHhc-CCEEEEEeeCC------CCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcc
Q 018138          112 KRRMLHVVYRVGDLDKTIKFYTECL-GMKLLRKRDIP------EDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGF  184 (360)
Q Consensus       112 ~~~l~HV~l~V~Dle~a~~FY~~vL-G~~~~~~~~~~------~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~  184 (360)
                      +++|...-+.+.|.+++++||+++| |+++.......      ++.+..+-+..++.    .+-+... .+. .. . . 
T Consensus         3 ~~~i~p~l~~~~d~~eA~~FY~~~f~G~~~~~~~~~~~~~~~~~~~v~ha~l~~~~~----~~m~~d~-~~~-~~-~-~-   73 (139)
T 1tsj_A            3 IPKITTFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNGQ----VFMAIDA-NSG-TE-L-P-   73 (139)
T ss_dssp             CCSEEEEEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETTE----EEEEEC-----------C-
T ss_pred             CCceeEEEEECCCHHHHHHHHHHHcCCCEEEEEEecCcCCCCCCCcEEEEEEEECCE----EEEEECC-CCC-CC-c-e-
Confidence            3455555455569999999999999 99997532221      23444455555432    1212111 111 11 1 1 


Q ss_pred             eEEEEEECC---HHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCC
Q 018138          185 GHFGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (360)
Q Consensus       185 ~hi~f~V~D---ld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~  240 (360)
                      ..+++.|+|   +++++++|. +|+++..+|...++|.+ ..+++||+|+.|+|.....
T Consensus        74 ~sl~~~~~d~~evd~~~~~l~-~G~~v~~p~~~~~wG~~-~g~v~Dp~G~~W~i~~~~~  130 (139)
T 1tsj_A           74 ISLFVTVKDTIEMERLFNGLK-DEGAILMPKTNMPPYRE-FAWVQDKFGVSFQLALPEE  130 (139)
T ss_dssp             CCEEEECSSHHHHHHHHHHHH-TTCEEEEEEEEETTEEE-EEEEECTTSCEEEEEECC-
T ss_pred             EEEEEECCCHHHHHHHHHHHh-CCCEEeecccccCCCce-EEEEECCCCCEEEEeeccc
Confidence            468899987   788899998 79999999999999875 6999999999999998654

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.05  E-value=3.6e-09  Score=103.12  Aligned_cols=101  Identities=19%  Similarity=0.304  Sum_probs=75.9

Q ss_pred             cccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCC-----CCeEEEEEeeCCCCceEEEEEEecCC----CCC---
Q 018138          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE-----DRYTNAFLGYGPEDSHFVVELTYNYG----VDK---  177 (360)
Q Consensus       110 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~-----~~~~~~~l~~g~~~~~~~lel~~~~~----~~~---  177 (360)
                      ..+.+|+||++.|+|++++++||+++|||++....+.++     .+....++..+.+  ...|++.++..    ...   
T Consensus       195 ~~~~~idHv~i~V~dl~~a~~FY~~vLGf~~~~~~~~~d~~~~~~gl~s~~l~~~~g--~i~l~l~e~~~~~~~~s~i~~  272 (418)
T 1sp8_A          195 YGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSE--NVLLPLNEPVHGTKRRSQIQT  272 (418)
T ss_dssp             CSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSS--CCEEEEEEECCCSSSCCHHHH
T ss_pred             CCcceEeeEEEecCCHHHHHHHHHHHcCCEEEEEecccccccccccceEEEEEcCCC--cEEEEEeecccccCCCcchhh
Confidence            457899999999999999999999999999987654322     1334566655433  35677766531    111   


Q ss_pred             C---cCCCcceEEEEEECCHHHHHHHHHH----cCCeEecCC
Q 018138          178 Y---DIGTGFGHFGIAVEDVAKTVDLVKA----KGGKVTREP  212 (360)
Q Consensus       178 ~---~~g~g~~hi~f~V~Dld~~~~rL~~----~G~~~~~~p  212 (360)
                      +   ..|.|++||||.|+|+++++++|++    +|+++...|
T Consensus       273 fl~~~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~P  314 (418)
T 1sp8_A          273 FLDHHGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAPP  314 (418)
T ss_dssp             HHHHHTSSEEEEEEEEETTHHHHHHHHHTSGGGTSCCBCCCC
T ss_pred             hhhccCCCCcCEEEEEeCCHHHHHHHHhhhhccCCeEEccCC
Confidence            1   2467999999999999999999999    799998875

>1u7i_A Hypothetical protein; structural genomics, PA1358, PSI, PROT structure initiative; HET: MSE; 1.40A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.03  E-value=1e-09  Score=90.03  Aligned_cols=100  Identities=14%  Similarity=0.059  Sum_probs=72.8

Q ss_pred             ceeeec--CHHHHHHHhhhcceEEe-eeccCC------C-----c--cEEEEEEeCCcc----cc--c--CCCCeeEEEE
Q 018138          248 VMLRVG--DLDRAINFYKKYTIAVM-GYGPED------K-----N--AVLELTYNHGVT----EY--D--KGNGYAQIAI  303 (360)
Q Consensus       248 v~L~V~--D~e~a~~FY~~~~~~~l-G~~~~~------~-----~--~~l~l~~~~~~~----~~--~--~g~g~~hiaf  303 (360)
                      ..|.+.  |.++|++||++    +| ||+...      .     .  ...++.......    ..  +  .....+.++|
T Consensus         9 ~~L~v~~~d~~~A~~FY~~----~f~G~~~~~~~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~   84 (136)
T 1u7i_A            9 PFLMFQGVQAEAAMNFYLS----LFDDAEILQIQRYGAEGPGPEGSVLKALFRLGDQSVHCIDSHVRHAFDFTPAFSFFV   84 (136)
T ss_dssp             EEEEEESSCHHHHHHHHHH----HCSSEEEEEEEECCTTCSSCTTSEEEEEEEETTEEEEEEEESSCCSCCCCTTEEEEE
T ss_pred             EEEEECCCCHHHHHHHHHH----HcCCCEeeEEEEcccCCCCCCCcEEEEEEEECCEEEEEECCCCCCCCCCCCceEEEE
Confidence            557886  99999999999    99 987531      0     1  122222111000    00  1  1123468999


Q ss_pred             EeCC---HHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCc
Q 018138          304 GTDD---VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  353 (360)
Q Consensus       304 ~V~D---l~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  353 (360)
                      .|+|   +++++++++ +|+++..+|.+.+++ .+.++++||+|+.|+|....
T Consensus        85 ~v~d~~evd~~~~~l~-~Gg~v~~p~~~~~~G-~~~~~~~Dp~G~~w~l~~~~  135 (136)
T 1u7i_A           85 DCESNAQIERLAEALS-DGGKALMPLGDYGFS-QRFAWLADRFGVSWQLNLAG  135 (136)
T ss_dssp             ECCCHHHHHHHHHHHH-TTSEEEEEEECCSSS-SEEEEEECTTSCEEEEEECC
T ss_pred             EcCCHHHHHHHHHHHH-cCCEEecccccCCCc-ceEEEEECCCCCEEEEEecC
Confidence            9999   999999999 999999999998875 68999999999999998753

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=99.02  E-value=7.7e-10  Score=100.65  Aligned_cols=108  Identities=18%  Similarity=0.270  Sum_probs=76.9

Q ss_pred             CCCceeceeeecCHHHHHHHhhhcceEEeeeccCCC-ccEEEEEEeCCcccc----cCCCCeeEEEEEe--CCHHHHHHH
Q 018138          242 PEPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK-NAVLELTYNHGVTEY----DKGNGYAQIAIGT--DDVYKTAEA  314 (360)
Q Consensus       242 ~~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~-~~~l~l~~~~~~~~~----~~g~g~~hiaf~V--~Dl~~~~~~  314 (360)
                      ..+++||.|.|+|++++.+||++    +||++.... ...+.+........+    ..+.+..|++|.|  +++++++++
T Consensus        24 ~~~l~hV~L~V~Dle~s~~FY~~----vLGl~~~~~~~~~~~L~~g~~~l~l~~~~~~~~~~~hiaf~V~~~dld~~~~r   99 (252)
T 3pkv_A           24 MTSIKQLTLYTAELDRMLAFYTN----MLGAQHVHEQADAFTIQLGVSQIQFRAAADGTKPFYHIAINIAANHFQEGKAW   99 (252)
T ss_dssp             -CCEEEEEEEESCHHHHHHHHHH----HHCGGGEEECSSEEEEEETTEEEEEEECCTTCCCCCEEEEEECTTCHHHHHHH
T ss_pred             CceEEEEEEEeCCHHHHHHHHHH----hcCCEEEEccCCEEEEEeCCEEEEEEECCCCCCCeeEEEEEecHHHHHHHHHH
Confidence            46899999999999999999999    999985421 122333321100000    1245689999998  469999999


Q ss_pred             HHHcCCeEeeC-Ccc---cCCCCcEEEEEECCCCCeEEEEcCcc
Q 018138          315 IKLSGGKITRE-PGP---LPGINTKITACLDPDGWKSVFVDNLD  354 (360)
Q Consensus       315 l~~~G~~i~~~-p~~---~~~~~~~~~~~~DPdG~~iel~~~~~  354 (360)
                      |+++ +++..+ +..   ...+..+.+||+|||||.|||++...
T Consensus       100 L~~~-v~~~~~~~~~~~~~~~~g~~~~~f~DPdGn~iEl~~~~~  142 (252)
T 3pkv_A          100 LSGF-GELLTENDEDQAYFPFFNAYSCYVEDPSGNIIELISRQQ  142 (252)
T ss_dssp             HTTS-SCCCCBTTBSCEEETTTTEEEEEEECTTCCEEEEEEESS
T ss_pred             HHhc-ceEeccCCccccccccCCeEEEEEECCCCCEEEEEEeCC
Confidence            9999 998663 221   01223789999999999999998754

>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0

Probab=99.01  E-value=9.7e-09  Score=84.63  Aligned_cols=112  Identities=11%  Similarity=0.172  Sum_probs=79.3

Q ss_pred             EEeC-CHHHHHHHHHHhcC-CEEEEEeeC------CCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEE
Q 018138          120 YRVG-DLDKTIKFYTECLG-MKLLRKRDI------PEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (360)
Q Consensus       120 l~V~-Dle~a~~FY~~vLG-~~~~~~~~~------~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V  191 (360)
                      |.+. |.+++++||+++|| .++......      .++.+..+.|.++..    .|.+...........+. -..+++.|
T Consensus        15 L~f~g~a~eA~~FY~~vFg~~~i~~~~~~~~~~~~~~g~v~ha~l~i~g~----~lm~~d~~~~~~~~~~~-~~~l~l~~   89 (138)
T 3oms_A           15 LMFEGKAEEAMNFYTSLFDQSEIVSISRYDENGPGKEGTVIHATFTLNGQ----EFMCIDSYVNHNFTFTP-AMSLYVTC   89 (138)
T ss_dssp             EEESSCHHHHHHHHHTTSTTCCEEEEEECCTTCSSCTTSEEEEEEEETTE----EEEEEECSSCCSCCCCT-TSCEEEEE
T ss_pred             EEECCCHHHHHHHHHHHcCCceEEEEEecCCCCCCCCCcEEEEEEEECCE----EEEEEcCCCCCCCCCCC-CEEEEEEc
Confidence            6677 89999999999999 676543222      234455677776532    33333322111112222 34689999


Q ss_pred             CC---HHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeec
Q 018138          192 ED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (360)
Q Consensus       192 ~D---ld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~  238 (360)
                      +|   +++++++|. +|+++..+|...++|.+ +.+++||+|+.|.|...
T Consensus        90 ~d~~evd~~~~~l~-~Gg~v~~p~~~~~wg~~-~~~~~Dp~G~~W~i~~~  137 (138)
T 3oms_A           90 ETEEEIDTVFHKLA-QDGAILMPLGSYPFSKK-FGWLNDKYGVSWQLTLA  137 (138)
T ss_dssp             SSHHHHHHHHHHHH-TTCEEEEEEEEETTEEE-EEEEECTTSCEEEEEEC
T ss_pred             CCHHHHHHHHHHHH-cCCeEecCcccccCCcE-EEEEECCCCCEEEEEeC
Confidence            99   999999995 69999999999999865 68999999999998754

>3l20_A Putative uncharacterized protein; hypothetical protein, unknown function; 2.45A {Staphylococcus aureus}

Probab=99.01  E-value=1.5e-08  Score=86.48  Aligned_cols=116  Identities=13%  Similarity=0.157  Sum_probs=82.4

Q ss_pred             EEEEEeCCHHHHHHHHHHhcCCEEEEEeeCC--------------CCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCC
Q 018138          117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIP--------------EDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGT  182 (360)
Q Consensus       117 HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~--------------~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~  182 (360)
                      .-.|.+.|.++|++||+++||+++.......              ++.+..+.|.++..    .|-+....+. ....+.
T Consensus        28 ~PyL~f~~a~eAi~FY~~vFG~~~~~~~~~~d~p~~~~~~~~~~~~g~v~hael~i~g~----~lm~~D~~g~-~~~~~~  102 (172)
T 3l20_A           28 FPYIAFENSKEALAYYEEVFGATDVKRLEVGEEQASHFGMTKEEAQEATMHAEFEVLGV----KVLCSDSFGR-ADKINN  102 (172)
T ss_dssp             EEEEEESCHHHHHHHHHHHSCCEEEEEEECCTTTTTTTTCCHHHHHTCEEEEEEEETTE----EEEEEECTTC-CCCCCS
T ss_pred             EEEEEECCHHHHHHHHHHHcCCEEEEEEEcccCCcccccCCcccCCCcEEEEEEEECCE----EEEEECCCCC-CCCCCC
Confidence            4457777999999999999999987554331              23455666776532    3334332211 122232


Q ss_pred             cceEEEEEE--------CCHHHHHHHHHHcC-CeEecCCeecCCCCEEEEEEECCCCCEEEEeecC
Q 018138          183 GFGHFGIAV--------EDVAKTVDLVKAKG-GKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (360)
Q Consensus       183 g~~hi~f~V--------~Dld~~~~rL~~~G-~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~  239 (360)
                      + ..+++.+        +|+++++++|.+.| +++..+|...++|.+ +.+++||+|+.|+|...+
T Consensus       103 ~-~sl~l~~~~~d~~~~~dvd~~~~~l~~~G~a~v~~p~~~~~wG~r-~g~v~DpfG~~W~i~~~~  166 (172)
T 3l20_A          103 G-ISLLIDYDVNNKEDADKVEAFYEQIKDHSSIEIELPFADQFWGGK-MGVFTDKYGVRWMLHGQD  166 (172)
T ss_dssp             S-EEEEEEEETTCHHHHHHHHHHHHHHTTCTTCEEEEEEEECTTSSE-EEEEECTTSCEEEEEEEC
T ss_pred             c-EEEEEEEccCccCcHHHHHHHHHHHHhCCCceEecCccccCCCcE-EEEEECCCCCEEEEEeCC
Confidence            3 3466666        57999999999999 699999999999876 588999999999998754

>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.00  E-value=1.9e-09  Score=89.99  Aligned_cols=99  Identities=17%  Similarity=0.166  Sum_probs=71.8

Q ss_pred             eceeeec-CHHHHHHHhhhcceEEeeeccCCC-----------------c--cEEEEEEeCC-------cc--cccCCCC
Q 018138          247 QVMLRVG-DLDRAINFYKKYTIAVMGYGPEDK-----------------N--AVLELTYNHG-------VT--EYDKGNG  297 (360)
Q Consensus       247 hv~L~V~-D~e~a~~FY~~~~~~~lG~~~~~~-----------------~--~~l~l~~~~~-------~~--~~~~g~g  297 (360)
                      ...|.|. |.++|++||++    +|||+....                 .  ...++.....       ..  ..+...+
T Consensus         6 ~p~L~v~~d~~~A~~FY~~----vfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~~l~~~d~~~~~~~~~~~g   81 (149)
T 1u6l_A            6 VPYLIFNGNCREAFSCYHQ----HLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGSFALMASDNHPAYPYEGIKG   81 (149)
T ss_dssp             EEEEEESSCHHHHHHHHHH----HHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETTEEEEEEECCTTSCCCCCCS
T ss_pred             EEEEEECCCHHHHHHHHHH----HhCCEEEEEEEcccCCcccCCCcccCCcEEEEEEEECCEEEEEEcCCCccCCCCCCc
Confidence            3568888 99999999999    889864310                 1  1222322110       00  0111234


Q ss_pred             eeEEEEEeCC---HHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcC
Q 018138          298 YAQIAIGTDD---VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  352 (360)
Q Consensus       298 ~~hiaf~V~D---l~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  352 (360)
                       ++++|.|+|   +++++++|+ +|+++..+|.+.+++ .++++|+||+|+.|+|.+.
T Consensus        82 -~~l~~~v~d~~evd~~~~~l~-~Gg~i~~p~~~~~wG-~r~~~v~Dp~G~~w~l~~~  136 (149)
T 1u6l_A           82 -CSISLNVDSKAEAERLFNALA-EGGSVQMPLGPTFWA-ASFGMFTDRFGVAWMVNCE  136 (149)
T ss_dssp             -EEEEEECSSHHHHHHHHHHHH-TTSEEEEEEEEETTE-EEEEEEECTTSCEEEEEES
T ss_pred             -eEEEEEcCCHHHHHHHHHHHH-CCCEEeecccccCcc-cceEEEECCCCCEEEEEEe
Confidence             689999998   789999985 899999999988885 5899999999999999875

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=98.98  E-value=3.2e-09  Score=102.41  Aligned_cols=102  Identities=14%  Similarity=0.229  Sum_probs=76.0

Q ss_pred             cccceeEEEEEEeCC--HHHHHHHHHHhcCCEEEEEee---C--CCCCeEEEEEeeCCCCceEEEEEEecCC--CCC---
Q 018138          110 SDKRRMLHVVYRVGD--LDKTIKFYTECLGMKLLRKRD---I--PEDRYTNAFLGYGPEDSHFVVELTYNYG--VDK---  177 (360)
Q Consensus       110 ~~~~~l~HV~l~V~D--le~a~~FY~~vLG~~~~~~~~---~--~~~~~~~~~l~~g~~~~~~~lel~~~~~--~~~---  177 (360)
                      .++.+|+||++.|+|  ++++.+||+++|||+.....+   .  +....+...+....  ....|+|.++..  ...   
T Consensus       169 ~~l~~IDHv~i~V~~~~l~~a~~fY~~~lGf~~~~~~d~~~i~~~~~gl~s~~~~~~~--g~v~i~L~ep~~~~~~s~I~  246 (393)
T 3isq_A          169 CSLEMIDHIVGNQPDQEMVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYE--ESIKMPINEPAPGKKKSQIQ  246 (393)
T ss_dssp             CCEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEECTTTSBCSSCEEEEEEEECTT--SSCEEEEEEEECCSBCCHHH
T ss_pred             CCeeEEeEEEEecCccHHHHHHHHHHHHhCCEEeccccccccccCCCcEEEEEEECCC--CCEEEEEecCCCCCCCCHHH
Confidence            357899999999998  999999999999999976533   1  12334444554332  245677776532  111   


Q ss_pred             ----CcCCCcceEEEEEECCHHHHHHHHHHcCCeEecCCe
Q 018138          178 ----YDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPG  213 (360)
Q Consensus       178 ----~~~g~g~~hi~f~V~Dld~~~~rL~~~G~~~~~~p~  213 (360)
                          ...|.|++||||.|+|+.+++++|+++|+++...|.
T Consensus       247 ~fL~~~~G~Gi~HiA~~~dDi~~~~~~l~~~Gv~~l~~P~  286 (393)
T 3isq_A          247 EYVDYNGGAGVQHIALKTEDIITAIRHLRERGLEFLSVPS  286 (393)
T ss_dssp             HHHHHHTSSEEEEEEEEESCHHHHHHHHHHTTCCBCCCCH
T ss_pred             HHHHHcCCCCcceEEEEcCCHHHHHHHHHHcCCccCCCCc
Confidence                114789999999999999999999999999887763

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=98.96  E-value=3.6e-09  Score=103.29  Aligned_cols=128  Identities=18%  Similarity=0.283  Sum_probs=89.9

Q ss_pred             cccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCC-----CCeEEEEEeeCCCCceEEEEEEecCC----CC---C
Q 018138          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE-----DRYTNAFLGYGPEDSHFVVELTYNYG----VD---K  177 (360)
Q Consensus       110 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~-----~~~~~~~l~~g~~~~~~~lel~~~~~----~~---~  177 (360)
                      ..+.+|+||+++|+|++++++||+++|||++..+.+.++     ......++.....  ...|++.++..    ..   .
T Consensus       198 ~~~~~idHv~i~V~dl~~a~~FY~~~LGf~~~~~~~~~d~~~~~~gl~s~~l~~~~g--~~~l~l~e~~~~~~~~s~i~~  275 (424)
T 1sqd_A          198 YGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDE--MVLLPINEPVHGTKRKSQIQT  275 (424)
T ss_dssp             SSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTTS--CSEEEEEEECCC---CCHHHH
T ss_pred             CCcceEeeEEEeeCCHHHHHHHHHHhhCCeEEEEEcccccccccccceEEEEEcCCC--cEEEEEecccccCCCcchhhh
Confidence            457899999999999999999999999999987653321     2344556654433  35677776531    11   1


Q ss_pred             C---cCCCcceEEEEEECCHHHHHHHHHH----cCCeEecCC-eecCC------C------------CEEEEEEECCCCC
Q 018138          178 Y---DIGTGFGHFGIAVEDVAKTVDLVKA----KGGKVTREP-GPVKG------G------------NTVIAFIEDPDGY  231 (360)
Q Consensus       178 ~---~~g~g~~hi~f~V~Dld~~~~rL~~----~G~~~~~~p-~~~~~------g------------~~~~~~~~DPdG~  231 (360)
                      +   ..|.|++||||.|+|+.+++++|++    +|+++...| ...-+      +            ...+.+-.|.+|.
T Consensus       276 fl~~~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~pp~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~d~~g~  355 (424)
T 1sqd_A          276 YLEHNEGAGLQHLALMSEDIFRTLREMRKRSSIGGFDFMPSPPPTYYQNLKKRVGDVLSDDQIKECEELGILVDRDDQGT  355 (424)
T ss_dssp             HHHHHTSCEEEEEEEEESCHHHHHHHHHHHGGGTSCCBCCCCCHHHHHHHHHHHTTTSCHHHHHHHHHHTCEEEECSSEE
T ss_pred             hhhhcCCCCcCEEEEEeCCHHHHHHHHHhhhccCCcEEecCCCcchhHHHHHhhccccchhhHHHHHHcCeEEecCCCCe
Confidence            1   2467999999999999999999999    899988765 22100      0            0114666788888


Q ss_pred             EEEEeecC
Q 018138          232 KFELLERG  239 (360)
Q Consensus       232 ~iEl~~~~  239 (360)
                      +++++..+
T Consensus       356 llqift~~  363 (424)
T 1sqd_A          356 LLQIFTKP  363 (424)
T ss_dssp             EEEEEBCC
T ss_pred             EEEEEccc
Confidence            88887654

>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7

Probab=98.61  E-value=1.4e-07  Score=77.62  Aligned_cols=101  Identities=13%  Similarity=0.108  Sum_probs=69.2

Q ss_pred             ceeceeeecCHHHHHHHhhhcceEEe-eeccCC-------------CccEEEEEEeCCcc-cccC----CCCeeEEEEEe
Q 018138          245 LCQVMLRVGDLDRAINFYKKYTIAVM-GYGPED-------------KNAVLELTYNHGVT-EYDK----GNGYAQIAIGT  305 (360)
Q Consensus       245 i~hv~L~V~D~e~a~~FY~~~~~~~l-G~~~~~-------------~~~~l~l~~~~~~~-~~~~----g~g~~hiaf~V  305 (360)
                      +....+.+.|.++|++||++    +| |++...             .-...++....... ....    +.. ..+++.|
T Consensus         6 i~p~l~~~~d~~eA~~FY~~----~f~G~~~~~~~~~~~~~~~~~~~v~ha~l~~~~~~~m~~d~~~~~~~~-~sl~~~~   80 (139)
T 1tsj_A            6 ITTFLMFNNQAEEAVKLYTS----LFEDSEIITMAKYGENGPGDPGTVQHSIFTLNGQVFMAIDANSGTELP-ISLFVTV   80 (139)
T ss_dssp             EEEEEECSSCHHHHHHHHHH----HSSSCEEEEEEECC-----CTTSEEEEEEEETTEEEEEEC-------C-CCEEEEC
T ss_pred             eeEEEEECCCHHHHHHHHHH----HcCCCEEEEEEecCcCCCCCCCcEEEEEEEECCEEEEEECCCCCCCce-EEEEEEC
Confidence            44444455699999999999    88 876431             11122332211100 0000    111 4688888


Q ss_pred             CC---HHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcC
Q 018138          306 DD---VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  352 (360)
Q Consensus       306 ~D---l~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  352 (360)
                      +|   +++++++|. +|+++..++.+.+++ .+..+|+||+|+.|+|...
T Consensus        81 ~d~~evd~~~~~l~-~G~~v~~p~~~~~wG-~~~g~v~Dp~G~~W~i~~~  128 (139)
T 1tsj_A           81 KDTIEMERLFNGLK-DEGAILMPKTNMPPY-REFAWVQDKFGVSFQLALP  128 (139)
T ss_dssp             SSHHHHHHHHHHHH-TTCEEEEEEEEETTE-EEEEEEECTTSCEEEEEEC
T ss_pred             CCHHHHHHHHHHHh-CCCEEeecccccCCC-ceEEEEECCCCCEEEEeec
Confidence            77   788899998 799999999999986 6899999999999999875

>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0

Probab=98.54  E-value=4.6e-07  Score=74.48  Aligned_cols=97  Identities=14%  Similarity=0.124  Sum_probs=68.3

Q ss_pred             eeeec-CHHHHHHHhhhcceEEee-eccC-----------CCc--cEEEEEEeCCc---------ccccCCCCeeEEEEE
Q 018138          249 MLRVG-DLDRAINFYKKYTIAVMG-YGPE-----------DKN--AVLELTYNHGV---------TEYDKGNGYAQIAIG  304 (360)
Q Consensus       249 ~L~V~-D~e~a~~FY~~~~~~~lG-~~~~-----------~~~--~~l~l~~~~~~---------~~~~~g~g~~hiaf~  304 (360)
                      .|.+. |.++|++||++    +|| .+..           ..+  ...++......         .....+ .-..+++.
T Consensus        14 ~L~f~g~a~eA~~FY~~----vFg~~~i~~~~~~~~~~~~~~g~v~ha~l~i~g~~lm~~d~~~~~~~~~~-~~~~l~l~   88 (138)
T 3oms_A           14 FLMFEGKAEEAMNFYTS----LFDQSEIVSISRYDENGPGKEGTVIHATFTLNGQEFMCIDSYVNHNFTFT-PAMSLYVT   88 (138)
T ss_dssp             EEEESSCHHHHHHHHHT----TSTTCCEEEEEECCTTCSSCTTSEEEEEEEETTEEEEEEECSSCCSCCCC-TTSCEEEE
T ss_pred             EEEECCCHHHHHHHHHH----HcCCceEEEEEecCCCCCCCCCcEEEEEEEECCEEEEEEcCCCCCCCCCC-CCEEEEEE
Confidence            46666 89999999998    888 4321           111  12333321110         001112 23578999


Q ss_pred             eCC---HHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcC
Q 018138          305 TDD---VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  352 (360)
Q Consensus       305 V~D---l~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  352 (360)
                      |+|   +++++++|. .|+++..+|.+.+++ .+..+++||+|+.|.|.-.
T Consensus        89 ~~d~~evd~~~~~l~-~Gg~v~~p~~~~~wg-~~~~~~~Dp~G~~W~i~~~  137 (138)
T 3oms_A           89 CETEEEIDTVFHKLA-QDGAILMPLGSYPFS-KKFGWLNDKYGVSWQLTLA  137 (138)
T ss_dssp             ESSHHHHHHHHHHHH-TTCEEEEEEEEETTE-EEEEEEECTTSCEEEEEEC
T ss_pred             cCCHHHHHHHHHHHH-cCCeEecCcccccCC-cEEEEEECCCCCEEEEEeC
Confidence            999   999999995 688999999999986 6899999999999999753

>3l20_A Putative uncharacterized protein; hypothetical protein, unknown function; 2.45A {Staphylococcus aureus}

Probab=98.32  E-value=1.2e-06  Score=74.72  Aligned_cols=100  Identities=17%  Similarity=0.076  Sum_probs=68.3

Q ss_pred             ceeeecCHHHHHHHhhhcceEEeeeccC---------------------CCccEEEEEEeCCc--------ccccCCCCe
Q 018138          248 VMLRVGDLDRAINFYKKYTIAVMGYGPE---------------------DKNAVLELTYNHGV--------TEYDKGNGY  298 (360)
Q Consensus       248 v~L~V~D~e~a~~FY~~~~~~~lG~~~~---------------------~~~~~l~l~~~~~~--------~~~~~g~g~  298 (360)
                      -.|.+.|.++|++||++    +||.+..                     +.-...+|......        .....+++ 
T Consensus        29 PyL~f~~a~eAi~FY~~----vFG~~~~~~~~~~d~p~~~~~~~~~~~~g~v~hael~i~g~~lm~~D~~g~~~~~~~~-  103 (172)
T 3l20_A           29 PYIAFENSKEALAYYEE----VFGATDVKRLEVGEEQASHFGMTKEEAQEATMHAEFEVLGVKVLCSDSFGRADKINNG-  103 (172)
T ss_dssp             EEEEESCHHHHHHHHHH----HSCCEEEEEEECCTTTTTTTTCCHHHHHTCEEEEEEEETTEEEEEEECTTCCCCCCSS-
T ss_pred             EEEEECCHHHHHHHHHH----HcCCEEEEEEEcccCCcccccCCcccCCCcEEEEEEEECCEEEEEECCCCCCCCCCCc-
Confidence            34677799999999998    7776521                     00112333321100        01112223 


Q ss_pred             eEEEEEe--------CCHHHHHHHHHHcC-CeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCc
Q 018138          299 AQIAIGT--------DDVYKTAEAIKLSG-GKITREPGPLPGINTKITACLDPDGWKSVFVDNL  353 (360)
Q Consensus       299 ~hiaf~V--------~Dl~~~~~~l~~~G-~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  353 (360)
                      ..+++.+        +|+++++++|.+.| +++..+|.+.+++ .+..+|+||+|+.|+|....
T Consensus       104 ~sl~l~~~~~d~~~~~dvd~~~~~l~~~G~a~v~~p~~~~~wG-~r~g~v~DpfG~~W~i~~~~  166 (172)
T 3l20_A          104 ISLLIDYDVNNKEDADKVEAFYEQIKDHSSIEIELPFADQFWG-GKMGVFTDKYGVRWMLHGQD  166 (172)
T ss_dssp             EEEEEEEETTCHHHHHHHHHHHHHHTTCTTCEEEEEEEECTTS-SEEEEEECTTSCEEEEEEEC
T ss_pred             EEEEEEEccCccCcHHHHHHHHHHHHhCCCceEecCccccCCC-cEEEEEECCCCCEEEEEeCC
Confidence            3455555        58999999999999 6999999988886 68899999999999997654

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=98.09  E-value=4.1e-05  Score=69.99  Aligned_cols=149  Identities=12%  Similarity=0.111  Sum_probs=97.8

Q ss_pred             cccceeEEEEEEeCCHHHHHHHHHHhcC-----CEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCC---------
Q 018138          110 SDKRRMLHVVYRVGDLDKTIKFYTECLG-----MKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV---------  175 (360)
Q Consensus       110 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG-----~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~---------  175 (360)
                      .|+.+|+|+++.|++++        .||     |.+.....-+..+.....+.++ +   ..||+....+.         
T Consensus        20 ~M~~~lDHlVi~v~~l~--------~lG~~~~~f~~~~GG~H~~~GT~N~Li~fd-g---~YLElIai~~~~~~~~~~~~   87 (274)
T 3p8a_A           20 HMILKFDHIIHYIDQLD--------RFSFPGDVIKLHSGGYHHKYGTFNKLGYIN-E---NYIELLDVENNEKLKKMAKT   87 (274)
T ss_dssp             -CCCEEEEEEEECTTGG--------GCCCGGGSSCCEEEEEETTTTEEEEEEECS-S---SEEEEEEESCHHHHHHHTTS
T ss_pred             CccccCCEEEEEeccHH--------HcCCccceEEeCCCccCCCCCCEEEEEeeC-C---EEEEEEeecCcccccccccc
Confidence            47899999999999884        467     9887655444334444555553 2   37888763321         


Q ss_pred             --C--CC-------cCCCcceEEEEEECCHHHHHHHHHHcCCeEecC---CeecCCCC---EEEEEEECCC--CCEE-EE
Q 018138          176 --D--KY-------DIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTRE---PGPVKGGN---TVIAFIEDPD--GYKF-EL  235 (360)
Q Consensus       176 --~--~~-------~~g~g~~hi~f~V~Dld~~~~rL~~~G~~~~~~---p~~~~~g~---~~~~~~~DPd--G~~i-El  235 (360)
                        .  .+       ..+.|+.+++++++|+++..+++.++|+.+..+   ....++|.   ...++..|++  +..+ -+
T Consensus        88 ~~~~~~f~~~~~~~~~geGl~~~alrt~Di~a~~a~l~~~Gl~~~~p~~~sR~~pDG~~l~W~l~~~~d~~~~~~~~PFf  167 (274)
T 3p8a_A           88 IEGGVAFATQIVQEKYEQGFKNICLHTNDIEAVKNKLQSEQVEVVGPIQMERDTHKDGKVKWQLLYIMNQDDDEIKPPFF  167 (274)
T ss_dssp             TGGGTCTTTHHHHTTTCCEEEEEEEECSCHHHHHHHHHTTTCEEEEEEEEEECCCC--CEEEEEEEEECSSCCSSCCCEE
T ss_pred             cCccchHHHHhhhhccCCCeEEEEEecCCHHHHHHHHHHcCCCcCCCccccccCCCCCEEEEEEEeccCCCccCCCccEE
Confidence              1  11       245799999999999999999999999875321   11223443   2245556665  2222 22


Q ss_pred             eecC-C-------------CCCCceeceeeecCHHHHHHHhhhcceEEeeecc
Q 018138          236 LERG-P-------------TPEPLCQVMLRVGDLDRAINFYKKYTIAVMGYGP  274 (360)
Q Consensus       236 ~~~~-~-------------~~~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~  274 (360)
                      ++.. +             ...+|.+|.+.+.|.+++.+.|++    +||...
T Consensus       168 iqw~~~~~~r~~~~~~HpnGa~gI~~vvi~~~dp~~~~~~~~~----l~g~~~  216 (274)
T 3p8a_A          168 IQWEESDSMRTKKLQKYFQKQFSIETVIVKSKNRSQTVSNWLK----WFDMDI  216 (274)
T ss_dssp             EEESSCTTHHHHHHTTTCCTTEEEEEEEEEETTHHHHHHHHHH----HHCCEE
T ss_pred             EecCCCccccccccccCCCccceEEEEEEEeCCHHHHHHHHHH----HhCCCc
Confidence            3221 1             124789999999999999999999    888754

>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=97.89  E-value=0.00016  Score=60.84  Aligned_cols=126  Identities=13%  Similarity=0.126  Sum_probs=83.4

Q ss_pred             EEeC-CHHHHHHHHHHhc-CCEEEEEeeC-------CCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEE
Q 018138          120 YRVG-DLDKTIKFYTECL-GMKLLRKRDI-------PEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  190 (360)
Q Consensus       120 l~V~-Dle~a~~FY~~vL-G~~~~~~~~~-------~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~  190 (360)
                      |... |.+++.+||+++| |.++......       +++.+..+-|.+++.    .+-+....  +.+....+ ..+.+.
T Consensus        11 L~f~g~a~eAi~FY~~vF~ga~i~~~~~~~~~~~~~~~g~Vmhael~i~g~----~~m~~d~~--p~~~~~~~-~sl~v~   83 (163)
T 1u69_A           11 LWYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMGI----PCLGLNGG--PAFRHSEA-FSFQVA   83 (163)
T ss_dssp             EEESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETTE----EEEEEECC--TTCCCCTT-EEEEEE
T ss_pred             EEECCCHHHHHHHHHHHhCCCEEeEEEeccCCCCCCCCCeEEEEEEEECCE----EEEEECCC--CCcCCCCc-eEEEEE
Confidence            6666 9999999999999 9998743222       134566677776532    23233221  12222223 378888


Q ss_pred             ECC---HHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCCCCCCceeceeeecCHHHHHHHhhhcce
Q 018138          191 VED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKYTI  267 (360)
Q Consensus       191 V~D---ld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~~~~~i~hv~L~V~D~e~a~~FY~~~~~  267 (360)
                      ++|   +++++++|.++|+++.      .     +..++||.|+.|.|....      ..-.+.-.|.+++.+-++.   
T Consensus        84 ~~d~~e~d~~~~~L~~~Gg~v~------~-----~G~v~D~fGv~W~i~~~~------~~~~~~d~d~~~~~r~~~a---  143 (163)
T 1u69_A           84 TDDQAETDRLWNAIVDNGGEES------A-----CGWCRDKWGISWQITPRV------LSEAIASPDRAAARRAFEA---  143 (163)
T ss_dssp             ESSHHHHHHHHHHHHHTTCEEC------S-----TTEEECTTSCEEEEEEHH------HHHHHTCSSHHHHHHHHHH---
T ss_pred             eCCHHHHHHHHHHHHhCCCEEE------E-----EEEEECCCCCEEEEEeEc------hHHhccCCCHHHHHHHHHH---
Confidence            887   7888999988898876      1     236899999999998632      0112345688888888886   


Q ss_pred             EEeeec
Q 018138          268 AVMGYG  273 (360)
Q Consensus       268 ~~lG~~  273 (360)
                       +|+++
T Consensus       144 -m~~m~  148 (163)
T 1u69_A          144 -MMTMG  148 (163)
T ss_dssp             -HTTCS
T ss_pred             -HHCCc
Confidence             66654

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=97.71  E-value=0.00013  Score=64.79  Aligned_cols=99  Identities=14%  Similarity=0.157  Sum_probs=62.1

Q ss_pred             eeceeeecCHHHHHHHhhhcceEEeeeccC-CCccE-----------EEEEEeCCcccccCCCCeeEE---EEEeCCHHH
Q 018138          246 CQVMLRVGDLDRAINFYKKYTIAVMGYGPE-DKNAV-----------LELTYNHGVTEYDKGNGYAQI---AIGTDDVYK  310 (360)
Q Consensus       246 ~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~-~~~~~-----------l~l~~~~~~~~~~~g~g~~hi---af~V~Dl~~  310 (360)
                      ....|+|+|.+++.+||++    ++||+.- .....           +.+....... .....|.-|+   ++.|++..+
T Consensus        12 ~~p~LrV~nr~~~~~FY~~----vlG~kll~ee~~~a~lg~~~~~~~L~lEEsp~~~-~~~~~Glkh~a~i~i~vp~~~e   86 (244)
T 3e0r_A           12 IIPTLKANNRKLNETFYIE----TLGMKALLEESAFLSLGDQTGLEKLVLEEAPSMR-TRKVEGRKKLARLIVKVENPLE   86 (244)
T ss_dssp             EEEEEEESSHHHHHHHHTT----TTCCEEEEECSSEEEEECTTCCEEEEEEECCTTT-CBCCCSSCSEEEEEEEESSHHH
T ss_pred             EeeEEEECCHHHHHHHHHh----ccCcEEeeccCcEEEeecCCCcceEEEEeCCCcc-cccccccceeeeEEEEcCCHHH
Confidence            3567999999999999999    9998631 11112           2222222111 1223455555   699998777


Q ss_pred             HHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCc
Q 018138          311 TAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  353 (360)
Q Consensus       311 ~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  353 (360)
                      +...|.. +.++...   -.+..++.+|+.||+||.||+....
T Consensus        87 l~~lL~~-~~~~~~~---~~gdhgyA~yl~dPEGn~ieiyae~  125 (244)
T 3e0r_A           87 IEGILSK-TDSIHRL---YKGQNGYAFEIFSPEDDLILIHAED  125 (244)
T ss_dssp             HHHHHTT-CSCCSEE---EECSSSEEEEEECTTCCEEEEECCS
T ss_pred             HHHHHhc-ccccccc---cccCCcEEEEEECCCCCeEEEEEcC
Confidence            7666655 5554220   1112356799999999999998754

>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=96.82  E-value=0.0013  Score=68.99  Aligned_cols=119  Identities=17%  Similarity=0.193  Sum_probs=73.0

Q ss_pred             ceeEEEEEEe---CCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCC--------------
Q 018138          113 RRMLHVVYRV---GDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV--------------  175 (360)
Q Consensus       113 ~~l~HV~l~V---~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~--------------  175 (360)
                      .+...+.+..   .-++++++||++.|++......   +.....++|.-.  .....+++......              
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (941)
T 3opy_B            8 NGTSFITLFAPNISLLQASIDFYTNFLGFAIRKNS---NQKLFWLQLEED--QNNVSIQLILDPEHAASVSQIDQNIRNL   82 (941)
T ss_dssp             CEEEEEEEECCC-CC-HHHHHHHHHTTCCEECSSC---SCCC---EECCT--TSCCEEEEECSSCSCHHHHHHHHHHHCC
T ss_pred             cceeEEEEEeCCHHHHHHHHHHHHhhccceecccc---CCcceeEEEecC--CCeEEEEEEeccccchhHHHHHHHHhhh
Confidence            3444555554   4689999999999999876422   211113445322  22445665433110              


Q ss_pred             C-----CCcCCCcceEEEEEECCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCC
Q 018138          176 D-----KYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (360)
Q Consensus       176 ~-----~~~~g~g~~hi~f~V~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~  240 (360)
                      .     ..+.+ -..|++|.+.|++++.++|.+.+.++..-|.+...   ..+|+.||+||.|+|.+...
T Consensus        83 ~~~~~~~dW~~-~~~~l~f~~~dL~~~~~~L~~~~~~~Q~~ps~~~~---~e~yt~DPlGNvIgfs~~~~  148 (941)
T 3opy_B           83 TRSLYRKDWRS-IQSNIAFKSSSLSKLVKLLKDGGHPVQQSPNEISP---FEVYTVDPLGSLIGFSGFKN  148 (941)
T ss_dssp             C-----------CCCEEEEEESCHHHHHHHHHTTTCCCBCSSSSCSC---EEECCSSCCEEEECC-CCSS
T ss_pred             hcccccccccc-cCceEEEEeCCHHHHHHHHHhcCCccccCCCcCCC---ceEEeECCCCCEEEEeccCC
Confidence            0     00111 12399999999999999999999887765554322   35899999999999997653

>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=96.10  E-value=0.0059  Score=64.03  Aligned_cols=55  Identities=18%  Similarity=0.188  Sum_probs=46.0

Q ss_pred             EEEEEeCCHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCccccc
Q 018138          300 QIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFLK  357 (360)
Q Consensus       300 hiaf~V~Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~  357 (360)
                      |+.|.+.|++++.+.|.+.+.++..-|.+...   ..+|..||+||.|+|.+.++.+.
T Consensus        97 ~l~f~~~dL~~~~~~L~~~~~~~Q~~ps~~~~---~e~yt~DPlGNvIgfs~~~~~~~  151 (941)
T 3opy_B           97 NIAFKSSSLSKLVKLLKDGGHPVQQSPNEISP---FEVYTVDPLGSLIGFSGFKNPFA  151 (941)
T ss_dssp             EEEEEESCHHHHHHHHHTTTCCCBCSSSSCSC---EEECCSSCCEEEECC-CCSSSCC
T ss_pred             eEEEEeCCHHHHHHHHHhcCCccccCCCcCCC---ceEEeECCCCCEEEEeccCCccc
Confidence            99999999999999999999887776654333   57899999999999999887654

>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=95.96  E-value=0.025  Score=47.29  Aligned_cols=88  Identities=17%  Similarity=0.145  Sum_probs=55.5

Q ss_pred             eeeec-CHHHHHHHhhhcceEEe-eeccC--------------CCccEEEEEEeCCc-------ccccCCCCeeEEEEEe
Q 018138          249 MLRVG-DLDRAINFYKKYTIAVM-GYGPE--------------DKNAVLELTYNHGV-------TEYDKGNGYAQIAIGT  305 (360)
Q Consensus       249 ~L~V~-D~e~a~~FY~~~~~~~l-G~~~~--------------~~~~~l~l~~~~~~-------~~~~~g~g~~hiaf~V  305 (360)
                      .|... |.++|.+||++    +| |.+..              +.-...++......       ...+...+ ..+.+.+
T Consensus        10 yL~f~g~a~eAi~FY~~----vF~ga~i~~~~~~~~~~~~~~~g~Vmhael~i~g~~~m~~d~~p~~~~~~~-~sl~v~~   84 (163)
T 1u69_A           10 CLWYDSAALEAATFYAE----TFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMGIPCLGLNGGPAFRHSEA-FSFQVAT   84 (163)
T ss_dssp             EEEESSCHHHHHHHHHH----HSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETTEEEEEEECCTTCCCCTT-EEEEEEE
T ss_pred             EEEECCCHHHHHHHHHH----HhCCCEEeEEEeccCCCCCCCCCeEEEEEEEECCEEEEEECCCCCcCCCCc-eEEEEEe
Confidence            36665 99999999998    77 54321              11112333321110       01111223 3677778


Q ss_pred             CC---HHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcC
Q 018138          306 DD---VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  352 (360)
Q Consensus       306 ~D---l~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  352 (360)
                      +|   +++.+++|.+.|+++.      .     ...++||.|+.|.|...
T Consensus        85 ~d~~e~d~~~~~L~~~Gg~v~------~-----~G~v~D~fGv~W~i~~~  123 (163)
T 1u69_A           85 DDQAETDRLWNAIVDNGGEES------A-----CGWCRDKWGISWQITPR  123 (163)
T ss_dssp             SSHHHHHHHHHHHHHTTCEEC------S-----TTEEECTTSCEEEEEEH
T ss_pred             CCHHHHHHHHHHHHhCCCEEE------E-----EEEEECCCCCEEEEEeE
Confidence            76   7788899988899876      1     23799999999999765

>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=85.40  E-value=14  Score=38.96  Aligned_cols=50  Identities=16%  Similarity=0.121  Sum_probs=35.9

Q ss_pred             eEEEEEECCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecC
Q 018138          185 GHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (360)
Q Consensus       185 ~hi~f~V~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~  239 (360)
                      ..+.|.+.|++++.+.|.+..++  ..|.....   ..+|..||-||.+.+....
T Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~---~~~~~~dp~~~~~~~~~~~  174 (989)
T 3opy_A          125 GEVTFFTASIDKLKAKLIEIGAE--IIPSKIDL---VEFSTRDPMGDVISFSSYP  174 (989)
T ss_dssp             CEEEEECSCHHHHHHHHHHSSCC--BCCCC--C---CCEEEESSSEEEEECCSSS
T ss_pred             ceEEEEeCcHHHHHHHhhhcccc--cCCCCCCc---eeEEEecCCCCEEeeecCC
Confidence            56899999999999999887333  22222211   1489999999999988544

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	360
d1f9za_	135	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	2e-29
d1f9za_	135	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	1e-12
d2c21a1	139	d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathion	8e-27
d2c21a1	139	d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathion	9e-10
d1qipa_	176	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	1e-24
d1qipa_	176	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	2e-06
d1twua_	137	d.32.1.8 (A:) Hypothetical protein YycE {Bacillus	1e-18
d1twua_	137	d.32.1.8 (A:) Hypothetical protein YycE {Bacillus	1e-07
d1zswa1	144	d.32.1.10 (A:1-144) Hypothetical protein BC1024 {B	7e-18
d1sp8a1	172	d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxyg	9e-18
d1sp8a1	172	d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxyg	0.004
d1sqda1	167	d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxyg	5e-17
d1sqda1	167	d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxyg	0.002
d1sqia1	149	d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxyge	9e-17
d1mpya2	162	d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (met	3e-16
d1jc4a_	145	d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propion	6e-16
d1r9ca_	130	d.32.1.2 (A:) Fosfomycin resistance protein FosX {	6e-16
d1r9ca_	130	d.32.1.2 (A:) Fosfomycin resistance protein FosX {	0.002
d1ss4a_	149	d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillu	2e-15
d1ss4a_	149	d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillu	4e-06
d1t47a1	163	d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxyg	3e-15
d1f1ua1	146	d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxyge	3e-14
d1f1ua1	146	d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxyge	0.003
d1mpya1	145	d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metap	5e-14
d1mpya1	145	d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metap	5e-04
d1f1ua2	176	d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxy	6e-14
d1f1ua2	176	d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxy	0.004
d1npba_	140	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	5e-12
d1nkia_	134	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	1e-11
d1nkia_	134	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	0.002
d1zswa2	170	d.32.1.10 (A:145-314) Hypothetical protein BC1024	3e-11
d2pjsa1	111	d.32.1.2 (A:3-113) Uncharacterized protein Atu1953	4e-11
d1lgta1	131	d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygena	5e-11
d1xqaa_	113	d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillu	3e-10
d1klla_	128	d.32.1.2 (A:) Mitomycin resistance protein D, MRD	3e-10
d1cjxa2	203	d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxy	4e-10
d1kw3b1	132	d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygena	1e-09
d1kw3b2	156	d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxyge	2e-09
d1kw3b2	156	d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxyge	0.002
d2i7ra1	115	d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Str	1e-08
d2i7ra1	115	d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Str	5e-05
d1xrka_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	1e-08
d1sp8a2	224	d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxy	2e-08
d1ecsa_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {K	6e-07
d1cjxa1	150	d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxyge	7e-07
d1xy7a_	135	d.32.1.9 (A:) Hypothetical protein At5g48480 {Thal	2e-06
d1sqia2	210	d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxy	5e-06
d1jifa_	122	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	5e-06
d1t47a2	199	d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxy	5e-05
d1u6la_	137	d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudom	6e-05
d1sqda2	230	d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxy	3e-04

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

 Score =  108 bits (270), Expect = 2e-29
 Identities = 74/132 (56%), Positives = 98/132 (74%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           R+LH + RVGDL ++I FYT+ LGMKLLR  + PE +Y+ AF+GYGPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
           GVDKY++GT +GH  ++V++ A+  + ++  GG VTRE GPVKGG TVIAF+EDPDGYK 
Sbjct: 62  GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query: 234 ELLERGPTPEPL 245
           EL+E       L
Sbjct: 122 ELIEEKDAGRGL 133

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

 Score = 62.4 bits (150), Expect = 1e-12
 Identities = 53/128 (41%), Positives = 73/128 (57%), Gaps = 16/128 (12%)

Query: 248 VMLRVGDLDRAINFYKK----------------YTIAVMGYGPEDKNAVLELTYNHGVTE 291
            MLRVGDL R+I+FY K                Y++A +GYGPE + AV+ELTYN GV +
Sbjct: 6   TMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDK 65

Query: 292 YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD 351
           Y+ G  Y  IA+  D+  +  E I+ +GG +TRE GP+ G  T I    DPDG+K   ++
Sbjct: 66  YELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIE 125

Query: 352 NLDFLKEL 359
             D  + L
Sbjct: 126 EKDAGRGL 133

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]} Length = 139

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

 Score =  101 bits (251), Expect = 8e-27
 Identities = 68/132 (51%), Positives = 82/132 (62%), Gaps = 5/132 (3%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
           RRMLH + RVGDLD++IKFYTE LGMK+LRK D+PED+YT  FLGYGPE S  V+ELTYN
Sbjct: 2   RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYN 61

Query: 173 YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 232
           YGV  Y     +GH  I VEDV + V  ++     +  E          +AF+ DPDGY 
Sbjct: 62  YGVTSYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDESGF-----MAFVVDPDGYY 116

Query: 233 FELLERGPTPEP 244
            ELL      E 
Sbjct: 117 IELLNEKTMMEK 128

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]} Length = 139

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

 Score = 54.3 bits (129), Expect = 9e-10
 Identities = 43/129 (33%), Positives = 63/129 (48%), Gaps = 21/129 (16%)

Query: 248 VMLRVGDLDRAINFYKK----------------YTIAVMGYGPEDKNAVLELTYNHGVTE 291
            M+RVGDLDR+I FY +                YT+  +GYGPE  + VLELTYN+GVT 
Sbjct: 7   TMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTS 66

Query: 292 YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD 351
           Y     Y  IAIG +DV +    ++     I  E       +  +   +DPDG+    ++
Sbjct: 67  YKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDE-----SGFMAFVVDPDGYYIELLN 121

Query: 352 NLDFLKELE 360
               +++ E
Sbjct: 122 EKTMMEKAE 130

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.0 bits (240), Expect = 1e-24
 Identities = 45/153 (29%), Positives = 67/153 (43%), Gaps = 26/153 (16%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVE----- 168
            +   + RV D  K++ FYT  LGM L++K D P  +++  FL Y  ++     +     
Sbjct: 23  LLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIA 82

Query: 169 ----------LTYNYGVDKYD---------IGTGFGHFGIAVEDVAKTVDLVKAKGGKVT 209
                     LT+N+G +  +            GFGH GIAV DV       +  G K  
Sbjct: 83  WALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFV 142

Query: 210 REPGPVKGGNTVIAFIEDPDGYKFELLERGPTP 242
           ++P    G    +AFI+DPDGY  E+L      
Sbjct: 143 KKPDD--GKMKGLAFIQDPDGYWIEILNPNKMA 173

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.4 bits (106), Expect = 2e-06
 Identities = 32/152 (21%), Positives = 53/152 (34%), Gaps = 46/152 (30%)

Query: 239 GPTPEP----LCQVMLRVGDLDRAINFYKK----------------YTIAVMGYGPE--- 275
              P      L Q MLRV D  ++++FY +                +++  + Y  +   
Sbjct: 14  DADPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDI 73

Query: 276 ------------DKNAVLELTYNHGVTEYD---------KGNGYAQIAIGTDDVYKTAEA 314
                        + A LELT+N G  + +            G+  I I   DVY   + 
Sbjct: 74  PKEKDEKIAWALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKR 133

Query: 315 IKLSGGKITREPGPLPGINTKITACLDPDGWK 346
            +  G K  ++P    G    +    DPDG+ 
Sbjct: 134 FEELGVKFVKKPD--DGKMKGLAFIQDPDGYW 163

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

 Score = 79.2 bits (194), Expect = 1e-18
 Identities = 25/124 (20%), Positives = 43/124 (34%), Gaps = 8/124 (6%)

Query: 115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYG 174
            + +    G LD+ I+FY E L +K +       + Y      +G   + + +E T   G
Sbjct: 10  QIRIARPTGQLDEIIRFYEEGLCLKRIG-EFSQHNGYDGVM--FGLPHADYHLEFTQYEG 66

Query: 175 VDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGY 231
                +          V    ++A     +K  G +      P          IEDPDG+
Sbjct: 67  GSTAPVPHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGG--VTIEDPDGW 124

Query: 232 KFEL 235
           +   
Sbjct: 125 RIVF 128

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

 Score = 48.4 bits (114), Expect = 1e-07
 Identities = 22/127 (17%), Positives = 40/127 (31%), Gaps = 22/127 (17%)

Query: 245 LCQVMLRV----GDLDRAINFYKKYT-------------IAVMGYGPEDKNAVLELTYNH 287
                +R+    G LD  I FY++                  + +G    +  LE T   
Sbjct: 6   FQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQHNGYDGVMFGLPHADYHLEFTQYE 65

Query: 288 GVTEYDKGNGYAQIAIGT---DDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 344
           G +     +  + +        ++      +K  G +      P            DPDG
Sbjct: 66  GGSTAPVPHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGG--VTIEDPDG 123

Query: 345 WKSVFVD 351
           W+ VF++
Sbjct: 124 WRIVFMN 130

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 144

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 77.4 bits (189), Expect = 7e-18
 Identities = 17/135 (12%), Positives = 33/135 (24%), Gaps = 4/135 (2%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVV--ELT 170
           +   H+     + ++   FY   LG++ ++     +D             S         
Sbjct: 5   KGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFE 64

Query: 171 YNYGVDKYDIGTGFGHFGIAVEDVAKTVD-LVKAKGGKVTREPGPVKGGNTVIAFIEDPD 229
                  Y         G+ V           + +   V             + F ED +
Sbjct: 65  IPLVGRTYRGTNAITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQF-EDAE 123

Query: 230 GYKFELLERGPTPEP 244
           G +  LL        
Sbjct: 124 GLRLVLLVSNGEKVE 138

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 172

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 78.0 bits (191), Expect = 9e-18
 Identities = 22/143 (15%), Positives = 35/143 (24%), Gaps = 18/143 (12%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
               HV     D       ++  LG  L  + D+      +A L        F+    Y 
Sbjct: 12  LAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYA 71

Query: 173 YGVDKYDI-----------------GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPV 215
           +G D                     G       + V D         A G +    P  +
Sbjct: 72  HGADAATAALPSFSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDL 131

Query: 216 KGGNTVIAFIEDPDGYKFELLER 238
             G   +A +E         +  
Sbjct: 132 GRG-FRLAEVELYGDVVLRYVSY 153

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 172

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 35.6 bits (81), Expect = 0.004
 Identities = 16/117 (13%), Positives = 24/117 (20%), Gaps = 33/117 (28%)

Query: 248 VMLRVGDLDRAINFYKK----------------YTIAVMGYGPEDKNAVLELTYNHGVTE 291
           V L   D   A   +                     A +       + +    Y HG   
Sbjct: 17  VELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADA 76

Query: 292 -----------------YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPG 331
                             D G     +A+   D      A   +G +    P  L  
Sbjct: 77  ATAALPSFSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGR 133

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 167

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 75.6 bits (185), Expect = 5e-17
 Identities = 24/149 (16%), Positives = 43/149 (28%), Gaps = 24/149 (16%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
           +R  H+ +  GD     + ++  LGM+   K D+      +A       D  F+    Y+
Sbjct: 11  KRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYS 70

Query: 173 YGVDKYDIG-----------------------TGFGHFGIAVEDVAKTVDLVKAKGGKVT 209
             +   +I                         G     I VED      +  A G   +
Sbjct: 71  PSLSAGEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPS 130

Query: 210 REPGPVKGGNTVIAFIEDPDGYKFELLER 238
             P  +      IA ++         +  
Sbjct: 131 SPPIVLNEA-VTIAEVKLYGDVVLRYVSY 158

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 167

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 36.3 bits (83), Expect = 0.002
 Identities = 23/160 (14%), Positives = 35/160 (21%), Gaps = 23/160 (14%)

Query: 172 NYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGY 231
           N   DK+ +   F H      D            G        +  GN V A      G 
Sbjct: 2   NPKSDKFKV-KRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGD 60

Query: 232 KFELLERGPTPEPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDKNAVLELTYNHGVTE 291
              L     +P               A       T ++  +      +            
Sbjct: 61  LRFLFTAPYSPS------------LSAGEIKPTTTASIPSFDHGSCRSFFSSHGL----- 103

Query: 292 YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPG 331
                G   +AI  +D          +G   +  P  L  
Sbjct: 104 -----GVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNE 138

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.5 bits (182), Expect = 9e-17
 Identities = 28/140 (20%), Positives = 47/140 (33%), Gaps = 10/140 (7%)

Query: 109 KSDKRRML---HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHF 165
           K ++ R L    V + VG+  +   FY   +G + L  + +                  F
Sbjct: 3   KPERGRFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVF 62

Query: 166 VVELTYNYGVDKYDI-----GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVK--GG 218
           V+    N    +        G G       VED    V   + +G K+ REP   +   G
Sbjct: 63  VLCSALNPWNKEMGDHLVKHGDGVKDIAFEVEDCEHIVQKARERGAKIVREPWVEEDKFG 122

Query: 219 NTVIAFIEDPDGYKFELLER 238
               A ++        L+E+
Sbjct: 123 KVKFAVLQTYGDTTHTLVEK 142

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 162

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 73.4 bits (179), Expect = 3e-16
 Identities = 20/134 (14%), Positives = 37/134 (27%), Gaps = 11/134 (8%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           R  H +    +L  T   +T+ LG  L  +           F          +    ++ 
Sbjct: 5   RFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQF--------LSLSTKAHDV 56

Query: 174 GVDKYDIGTGFGHFGIAVEDV---AKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDG 230
               +       H    +E      +  DL+      +   P      +    +  DP G
Sbjct: 57  AFIHHPEKGRLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSG 116

Query: 231 YKFELLERGPTPEP 244
            + E+   G    P
Sbjct: 117 NRNEVFCGGDYNYP 130

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

 Score = 72.0 bits (175), Expect = 6e-16
 Identities = 25/136 (18%), Positives = 51/136 (37%), Gaps = 12/136 (8%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVEL---- 169
            + HV Y   D D+  K+Y E  G   L + + PE       +    + +  + ++    
Sbjct: 7   CIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMA 66

Query: 170 ------TYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIA 223
                 T    + K++   G  H    V+D+      ++ +G ++  +   +  G   I 
Sbjct: 67  PLNDESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRIN 126

Query: 224 FI--EDPDGYKFELLE 237
           F+  +   G   EL +
Sbjct: 127 FMHPKSGKGVLIELTQ 142

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]} Length = 130

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

 Score = 71.5 bits (174), Expect = 6e-16
 Identities = 21/120 (17%), Positives = 39/120 (32%), Gaps = 8/120 (6%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTN-AFLGYGPEDSHFVVELTYNYGV 175
           H+ + V DL++  +        + +   D  +   +   F   G       + +    G 
Sbjct: 7   HMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGD------IWVAIMQGE 60

Query: 176 DKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL 235
              +       F I   D  +  + V   G  +      V+G    I +  D D + FEL
Sbjct: 61  KLAERSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSI-YFYDDDNHMFEL 119

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]} Length = 130

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

 Score = 35.7 bits (81), Expect = 0.002
 Identities = 16/108 (14%), Positives = 30/108 (27%), Gaps = 12/108 (11%)

Query: 248 VMLRVGDLDRAINFYKKYTIAVMGYGPEDKNAV-----------LELTYNHGVTEYDKGN 296
           +   V DL+R     +    A   Y  + +              + +    G    ++  
Sbjct: 8   MTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQGEKLAERSY 67

Query: 297 GYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 344
            +    I   D  + AE +   G  +      + G    I    D D 
Sbjct: 68  NHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSI-YFYDDDN 114

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

 Score = 70.9 bits (172), Expect = 2e-15
 Identities = 26/141 (18%), Positives = 46/141 (32%), Gaps = 18/141 (12%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPE---------DSH 164
           RM +V   V  LD  I F+ E +G+ L  + ++  +                     D H
Sbjct: 9   RMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGH 67

Query: 165 FVVELTYNYGV-------DKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKG 217
             +EL+                   G+      VED+ + V  +   G ++  E    + 
Sbjct: 68  SRIELSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYEN 127

Query: 218 GNTVIAFIEDPDGYKFELLER 238
               + +I   +G    L E 
Sbjct: 128 SYR-LCYIRGVEGILIGLAEE 147

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

 Score = 43.9 bits (102), Expect = 4e-06
 Identities = 17/128 (13%), Positives = 40/128 (31%), Gaps = 32/128 (25%)

Query: 248 VMLRVGDLDRAINFYKKYTIAVMGYGPE------------------------DKNAVLEL 283
           V + V  LD AI+F+++  + + G                            D ++ +EL
Sbjct: 13  VSIVVESLDNAISFFEEIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIEL 72

Query: 284 TYNHGVTE-------YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKI 336
           +                   GY ++    +D+ +    +   G ++  E       + ++
Sbjct: 73  SRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYEN-SYRL 131

Query: 337 TACLDPDG 344
                 +G
Sbjct: 132 CYIRGVEG 139

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 163

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 70.3 bits (171), Expect = 3e-15
 Identities = 26/136 (19%), Positives = 43/136 (31%), Gaps = 10/136 (7%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
           + M  VV+ VG+  +   +Y+   GM+L+            A        + FV+     
Sbjct: 6   KGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIK 65

Query: 173 YGVDKYDI--------GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGN--TVI 222
                           G G     I V D           G +   EP  +K  +   V+
Sbjct: 66  PATPWGHFLADHVAEHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVL 125

Query: 223 AFIEDPDGYKFELLER 238
           A I      +  L++R
Sbjct: 126 AAIATYGKTRHTLVDR 141

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 146

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 67.0 bits (162), Expect = 3e-14
 Identities = 24/135 (17%), Positives = 43/135 (31%), Gaps = 10/135 (7%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
            R  ++   V DL K+ +FY + LG+ +  + +                  + V+     
Sbjct: 15  VRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE----NTIYLRSLEEFIHHNLVLRQGPI 70

Query: 173 YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 232
             V  +       +   +  +V       K  G +  R       G      +EDP G+ 
Sbjct: 71  AAVAAF------AYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFP 124

Query: 233 FELLERGPTPEPLCQ 247
           +E        E L Q
Sbjct: 125 YEFFYETEHVERLTQ 139

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 146

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 35.4 bits (80), Expect = 0.003
 Identities = 19/118 (16%), Positives = 30/118 (25%), Gaps = 13/118 (11%)

Query: 240 PTP-EPLCQVM------LRVGDLDRAINFYKKYTIAVMGYGPEDKNAVLELTYNHGVT-- 290
           PTP  P   ++      + V DL ++  FY       +    E+   +  L         
Sbjct: 5   PTPSVPAPDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDENTIYLRSLEEFIHHNLV 64

Query: 291 ----EYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 344
                      +A       +V       K  G +  R                DP G
Sbjct: 65  LRQGPIAAVAAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLG 122

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 66.5 bits (161), Expect = 5e-14
 Identities = 22/122 (18%), Positives = 37/122 (30%), Gaps = 9/122 (7%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           R  HV  RV D+ K ++ Y E LG+  + + D                      +     
Sbjct: 7   RPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQGRVYLKAWTEVDKFSLVLREADEPGMD 66

Query: 174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
                      G   +  + + +    + A G  V + P             + P G+ F
Sbjct: 67  ---------FMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHF 117

Query: 234 EL 235
           EL
Sbjct: 118 EL 119

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 37.7 bits (86), Expect = 5e-04
 Identities = 13/104 (12%), Positives = 30/104 (28%), Gaps = 7/104 (6%)

Query: 248 VMLRVGDLDRAINFYKKYTIAV-------MGYGPEDKNAVLELTYNHGVTEYDKGNGYAQ 300
           V LRV D+ +A+  Y +    +            +    V + +      +    +    
Sbjct: 11  VQLRVLDMSKALEHYVELLGLIEMDRDDQGRVYLKAWTEVDKFSLVLREADEPGMDFMGF 70

Query: 301 IAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 344
             +  D + +    +   G  + + P        +      P G
Sbjct: 71  KVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSG 114

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 67.2 bits (163), Expect = 6e-14
 Identities = 21/124 (16%), Positives = 41/124 (33%), Gaps = 9/124 (7%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           R+ H      D+ +   +  E LG ++       +     A++          +      
Sbjct: 5   RLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGGNGP 63

Query: 174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFI--EDPDGY 231
            +      T   H  I +       D + A       E GP + G +   ++   DPDG+
Sbjct: 64  RMHHVAFATHEKHNIIQI------CDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGH 117

Query: 232 KFEL 235
           + E+
Sbjct: 118 RIEI 121

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 35.6 bits (81), Expect = 0.004
 Identities = 14/109 (12%), Positives = 27/109 (24%), Gaps = 11/109 (10%)

Query: 248 VMLRVGDLDRAINFYKKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKG---------NGY 298
                 D+ R   + +     V     +          +   T +D           +  
Sbjct: 9   FNQVTPDVPRGRAYLEDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGGNGPRMHHV 68

Query: 299 AQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITAC--LDPDGW 345
           A       ++ +  + +         E GP     +       LDPDG 
Sbjct: 69  AFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGH 117

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]} Length = 140

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

 Score = 60.8 bits (146), Expect = 5e-12
 Identities = 32/164 (19%), Positives = 55/164 (33%), Gaps = 26/164 (15%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
           + + H+   V DL K++ F+ E LG+ L         R+         +    +      
Sbjct: 3   QSLNHLTLAVSDLQKSVTFWHELLGLTLHA-------RWNTGAYLTCGDLWVCLSYDEAR 55

Query: 173 YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 232
             V   +       F +A ED       ++  G  VT        G +   +  DPDG+K
Sbjct: 56  QYVPPQESDYTHYAFTVAEEDFEPLSQRLEQAG--VTIWKQNKSEGASF--YFLDPDGHK 111

Query: 233 FELLERGPTPEPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPED 276
            E               L VG L   +   ++   A M +  ++
Sbjct: 112 LE---------------LHVGSLAARLAACREKPYAGMVFTSDE 140

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]} Length = 134

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 59.5 bits (143), Expect = 1e-11
 Identities = 29/119 (24%), Positives = 44/119 (36%), Gaps = 14/119 (11%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD 176
           H+   V DL  +I FY + LG +L             A+L  G       + L+      
Sbjct: 7   HLTLAVADLPASIAFYRDLLGFRLEA------RWDQGAYLELG----SLWLCLSREPQYG 56

Query: 177 KYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL 235
                     FGIA  D A+    ++A G  V         G++   +  DPDG++ E 
Sbjct: 57  GPAADYTHYAFGIAAADFARFAAQLRAHG--VREWKQNRSEGDSF--YFLDPDGHRLEA 111

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]} Length = 134

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 36.0 bits (82), Expect = 0.002
 Identities = 19/106 (17%), Positives = 33/106 (31%), Gaps = 10/106 (9%)

Query: 245 LCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK------NAVLELTYNHGVTEYDKGNGY 298
           L  + L V DL  +I FY+      +    +        +  L L+             +
Sbjct: 5   LNHLTLAVADLPASIAFYRDLLGFRLEARWDQGAYLELGSLWLCLSREPQYGGPAADYTH 64

Query: 299 AQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 344
               I   D  + A  ++  G +  ++              LDPDG
Sbjct: 65  YAFGIAAADFARFAAQLRAHGVREWKQNRS----EGDSFYFLDPDG 106

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 170

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 59.0 bits (142), Expect = 3e-11
 Identities = 26/131 (19%), Positives = 44/131 (33%), Gaps = 12/131 (9%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
           + M  V   V  LDK     TE  G   + + D        A       ++   + + Y 
Sbjct: 11  QGMGSVELTVRRLDKMASTLTEIFGYTEVSRNDQ------EAIFQSIKGEAFGEIVVKYL 64

Query: 173 YGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPD 229
            G  +        H  I V    ++A   + VK +G   +   G +        +  + +
Sbjct: 65  DGPTEKPGRGSIHHLAIRVKNDAELAYWEEQVKQRGFHSS---GIIDRFYFKSLYFRESN 121

Query: 230 GYKFELLERGP 240
           G  FE+   GP
Sbjct: 122 GILFEIATDGP 132

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]} Length = 111

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 57.7 bits (138), Expect = 4e-11
 Identities = 18/123 (14%), Positives = 37/123 (30%), Gaps = 13/123 (10%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           R +       +  +   FY + LGM              + ++           ++++  
Sbjct: 2   RRVVANIATPEPARAQAFYGDILGM---------PVAMDHGWIVTHASPLEAHAQVSFAR 52

Query: 174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
              +   GT      I V++  +    +   G  +   P     G     F+ DP G   
Sbjct: 53  ---EGGSGTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAWGVQR-LFLRDPFGKLI 108

Query: 234 ELL 236
            +L
Sbjct: 109 NIL 111

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]} Length = 131

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

 Score = 57.7 bits (138), Expect = 5e-11
 Identities = 23/125 (18%), Positives = 38/125 (30%), Gaps = 14/125 (11%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
           R + ++ + V D+     F T+ LG+      D                     V+    
Sbjct: 3   RSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTDN------GDLFRIDSRAWRIAVQ---- 52

Query: 173 YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFI--EDPDG 230
               + D     G+       +A+  D +K  G  VT     +     V   I   DP G
Sbjct: 53  --QGEVDDLAFAGYEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFG 110

Query: 231 YKFEL 235
              E+
Sbjct: 111 LPLEI 115

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]} Length = 113

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

 Score = 55.1 bits (131), Expect = 3e-10
 Identities = 18/119 (15%), Positives = 34/119 (28%), Gaps = 13/119 (10%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD 176
           H+   V D+    +F  +  G+     R        +         +   +         
Sbjct: 6   HLNLTVADVVAAREFLEKYFGLTCSGTRGNAFAVMRD---------NDGFILTLMKGKEV 56

Query: 177 KYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL 235
           +Y      G    + E V K    +K  G  V          +    ++E P G+  E+
Sbjct: 57  QYPKTFHVGFPQESEEQVDKINQRLKEDGFLVEPPK----HAHAYTFYVEAPGGFTIEV 111

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]} Length = 128

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

 Score = 55.1 bits (131), Expect = 3e-10
 Identities = 22/130 (16%), Positives = 36/130 (27%), Gaps = 4/130 (3%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVEL-TYN 172
           R+      V D+ K+++FY +            P              D+   V      
Sbjct: 2   RISLFAVVVEDMAKSMEFYRKMGVEIPAEADSAPHTEAVLDGGIRLAWDTVETVRSYDPE 61

Query: 173 YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 232
           +                    V K    +   G +   +P     G    A ++DPDG  
Sbjct: 62  WQAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRY-AIVKDPDGNV 120

Query: 233 FELLERGPTP 242
            +L    P P
Sbjct: 121 VDLFA--PLP 128

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]} Length = 203

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

 Score = 56.5 bits (136), Expect = 4e-10
 Identities = 22/136 (16%), Positives = 39/136 (28%), Gaps = 12/136 (8%)

Query: 113 RRMLHVVYRV--GDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELT 170
           + + H+ + V  G +     FY +    +  R  DI  +            D    + L 
Sbjct: 4   KVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLN 63

Query: 171 YNYGVDKYDIG--------TGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVI 222
                    I          G  H     +D+ KT D +K  G +      P      ++
Sbjct: 64  EESSKGAGQIEEFLMQFNGEGIQHVAFLTDDLVKTWDALKKIGMRFM--TAPPDTYYEML 121

Query: 223 AFIEDPDGYKFELLER 238
                  G   + L+ 
Sbjct: 122 EGRLPDHGEPVDQLQA 137

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]} Length = 132

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

 Score = 53.8 bits (128), Expect = 1e-09
 Identities = 19/125 (15%), Positives = 38/125 (30%), Gaps = 14/125 (11%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
            R+ ++ + V D+     F T+ +G+               A            V+    
Sbjct: 3   ERLGYLGFAVKDVPAWDHFLTKSVGLM------AAGSAGDAALYRADQRAWRIAVQ---- 52

Query: 173 YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFI--EDPDG 230
               + D     G        + +  D ++  G   TR    +     V+  +  +DP G
Sbjct: 53  --PGELDDLAYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFG 110

Query: 231 YKFEL 235
              E+
Sbjct: 111 LPLEI 115

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]} Length = 156

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

 Score = 53.6 bits (128), Expect = 2e-09
 Identities = 26/118 (22%), Positives = 39/118 (33%), Gaps = 9/118 (7%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD 176
           H V  V D  K + FYTE LG  L    DI     T+    +   +          + + 
Sbjct: 13  HFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHTIALAAFPIP 72

Query: 177 KYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGY 231
           K        HF +     +DV    D + A G   +   G      T+  + + P   
Sbjct: 73  K-----RIHHFMLQANTIDDVGYAFDRLDAAGRITS-LLGRHTNDQTLSFYADTPSPM 124

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]} Length = 156

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

 Score = 36.3 bits (83), Expect = 0.002
 Identities = 18/97 (18%), Positives = 28/97 (28%), Gaps = 6/97 (6%)

Query: 183 GFGHFGIAVEDVAKTVDLVKAKGG-KVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT 241
           G GHF   V D AK +       G  ++       G  T +         +   +     
Sbjct: 10  GIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHTIALAAF 69

Query: 242 PEP--LCQVMLRVGDLD---RAINFYKKYTIAVMGYG 273
           P P  +   ML+   +D    A +            G
Sbjct: 70  PIPKRIHHFMLQANTIDDVGYAFDRLDAAGRITSLLG 106

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]} Length = 115

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 50.6 bits (120), Expect = 1e-08
 Identities = 20/121 (16%), Positives = 37/121 (30%), Gaps = 12/121 (9%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD 176
            +   V ++ +        L  K         D   + F  +       ++  + N+ V 
Sbjct: 5   QLDIIVSNVPQVCADLEHILDKKA--------DYANDGFAQFTIGSHCLML--SQNHLVP 54

Query: 177 KYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL 236
             +  +G     I VEDV +    +   G KV   P     G      ++ P G   +  
Sbjct: 55  LENFQSGI-IIHIEVEDVDQNYKRLNELGIKVLHGPTVTDWGTES-LLVQGPAGLVLDFY 112

Query: 237 E 237
            
Sbjct: 113 R 113

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]} Length = 115

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 40.2 bits (93), Expect = 5e-05
 Identities = 19/104 (18%), Positives = 36/104 (34%), Gaps = 8/104 (7%)

Query: 247 QVMLRVGDLDRAINFYKKYTIAVMGYGPED------KNAVLELTYNHGVTEYDKGNGYAQ 300
           Q+ + V ++ +     +        Y  +        +  L L+ NH V   +  +G   
Sbjct: 5   QLDIIVSNVPQVCADLEHILDKKADYANDGFAQFTIGSHCLMLSQNHLVPLENFQSGII- 63

Query: 301 IAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 344
           I I  +DV +  + +   G K+   P       T+      P G
Sbjct: 64  IHIEVEDVDQNYKRLNELGIKVLHGPTVTDW-GTESLLVQGPAG 106

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

 Score = 50.8 bits (120), Expect = 1e-08
 Identities = 16/120 (13%), Positives = 28/120 (23%), Gaps = 8/120 (6%)

Query: 116 LHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV 175
              V    D+ + ++F+T+ LG   +   D        A +                   
Sbjct: 6   AVPVLTARDVAEAVEFWTDRLGFSRVFVED------DFAGVVRDDVTLFISAVQDQVVPD 59

Query: 176 DKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL 235
           +        G   +  E         +   G    E      G      + DP G     
Sbjct: 60  NTQAWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWGRE--FALRDPAGNCVHF 117

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 224

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 51.7 bits (123), Expect = 2e-08
 Identities = 21/139 (15%), Positives = 44/139 (31%), Gaps = 25/139 (17%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE--DRYT---NAFLGYGPEDSHFVV 167
            R  H+V  V +L     ++    G     +    +     +   +  L    E+    +
Sbjct: 8   SRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPL 67

Query: 168 -ELTYNYGVD-------KYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGN 219
            E  +             +  G G  H  +A +DV +T+  ++A+      E        
Sbjct: 68  NEPVHGTKRRSQIQTFLDHHGGPGVQHMALASDDVLRTLREMQARSAMGGFE-------- 119

Query: 220 TVIAFIEDPDGYKFELLER 238
               F+  P    ++ + R
Sbjct: 120 ----FMAPPTSDYYDGVRR 134

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 45.7 bits (107), Expect = 6e-07
 Identities = 22/124 (17%), Positives = 38/124 (30%), Gaps = 20/124 (16%)

Query: 121 RVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDI 180
              D D T  FY   LG  +              F   G         +   +     D 
Sbjct: 9   PSRDFDSTAAFYER-LGFGI-------------VFRDAGWMILQRGDLMLEFFAHPGLDP 54

Query: 181 GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTV------IAFIEDPDGYKFE 234
              +    + ++D+A+     K+ G + T    P      +      +A + DPDG    
Sbjct: 55  LASWFSCCLRLDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLR 114

Query: 235 LLER 238
           L++ 
Sbjct: 115 LIQN 118

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]} Length = 150

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

 Score = 46.1 bits (109), Expect = 7e-07
 Identities = 16/134 (11%), Positives = 36/134 (26%), Gaps = 11/134 (8%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD 176
            + +           + E +G        +   R  N  L Y   + + ++    N    
Sbjct: 12  FIEFASPTPGTLEPIF-EIMGFTK-----VATHRSKNVHL-YRQGEINLILNNEPNSIAS 64

Query: 177 KY--DIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFE 234
            +  + G         V+D  K  +     G +              +  I+   G    
Sbjct: 65  YFAAEHGPSVCGMAFRVKDSQKAYNRALELGAQPIHI--DTGPMELNLPAIKGIGGAPLY 122

Query: 235 LLERGPTPEPLCQV 248
           L++R      +  +
Sbjct: 123 LIDRFGEGSSIYDI 136

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 44.5 bits (104), Expect = 2e-06
 Identities = 14/128 (10%), Positives = 27/128 (21%), Gaps = 9/128 (7%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE-------DRYTNAFLGYGPEDSHFVVEL 169
            ++     +   + FY    G         P+           ++ L             
Sbjct: 10  MLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSFVVCDVS 69

Query: 170 TYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPD 229
           +          G+G     +  +D    V      G                   + DP 
Sbjct: 70  SLPGFSTAKSEGSGVTFL-LGTKDAEAAVAKAVDAGAVKVEVTEAEVELGFK-GKVTDPF 127

Query: 230 GYKFELLE 237
           G  +   E
Sbjct: 128 GVTWIFAE 135

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]} Length = 210

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.6 bits (105), Expect = 5e-06
 Identities = 16/115 (13%), Positives = 39/115 (33%), Gaps = 16/115 (13%)

Query: 113 RRMLHVVYRV--GDLDKTIKFYTECLGMKLLRKRDIPE--DRYTNAFLGYGPEDSHFVVE 168
             + H+V      +++   ++Y + L        D  +    Y+ +       +    ++
Sbjct: 23  EIIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYS-SLRSIVVANYEESIK 81

Query: 169 LTYNYGVD-----------KYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREP 212
           +  N                Y+ G G  H  +  ED+  T+  ++ +G +    P
Sbjct: 82  MPINEPAPGRKKSQIQEYVDYNGGAGVQHIALRTEDIITTIRHLRERGMEFLAVP 136

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]} Length = 122

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

 Score = 43.2 bits (100), Expect = 5e-06
 Identities = 15/124 (12%), Positives = 27/124 (21%), Gaps = 8/124 (6%)

Query: 112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTY 171
           K      V    D+   + F+ + LG +                  +     H +V    
Sbjct: 3   KFLGAVPVLTAVDVPANVSFWVDTLGFEKDFGDRDFAGVRRGDIRLHISRTEHQIVADNT 62

Query: 172 NYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGY 231
           +  ++  D       +                  G      G    G      + DP G 
Sbjct: 63  SAWIEVTDPDALHEEW------ARAVSTDYADTSGPAMTPVGESPAGRE--FAVRDPAGN 114

Query: 232 KFEL 235
               
Sbjct: 115 CVHF 118

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 199

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 41.5 bits (97), Expect = 5e-05
 Identities = 18/110 (16%), Positives = 38/110 (34%), Gaps = 14/110 (12%)

Query: 117 HVVYRV--GDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHF------VVE 168
           H V  V  G +++ + FY + +G   +++    +     + L               + E
Sbjct: 9   HCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINE 68

Query: 169 LTYNYGVD------KYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREP 212
                         ++  G G  H  +   D+ +TV  ++A G +    P
Sbjct: 69  PALAKKKSQIDEYLEFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTP 118

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 40.5 bits (94), Expect = 6e-05
 Identities = 18/123 (14%), Positives = 36/123 (29%), Gaps = 12/123 (9%)

Query: 123 GDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELT-YNYGVDKYDIG 181
           G+  +    Y + LG  L       +            +D      L   ++ +   D  
Sbjct: 12  GNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPA-DWKDKIMHARLVVGSFALMASDNH 70

Query: 182 TGFGHFG---------IAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 232
             + + G         +  +  A+ +    A+GG V    GP     +      D  G  
Sbjct: 71  PAYPYEGIKGCSISLNVDSKAEAERLFNALAEGGSVQMPLGPTFWAASF-GMFTDRFGVA 129

Query: 233 FEL 235
           + +
Sbjct: 130 WMV 132

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 230

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 39.3 bits (91), Expect = 3e-04
 Identities = 12/102 (11%), Positives = 30/102 (29%), Gaps = 13/102 (12%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE------DRYTNAFLGYGPEDSHFVVELT 170
           H V  V +L   + +     G     +    +         +             + E  
Sbjct: 25  HAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPINEPV 84

Query: 171 YNYGVD-------KYDIGTGFGHFGIAVEDVAKTVDLVKAKG 205
           +            +++ G G  H  +  ED+ +T+  ++ + 
Sbjct: 85  HGTKRKSQIQTYLEHNEGAGLQHLALMSEDIFRTLREMRKRS 126

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	360
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	99.82
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	99.78
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.77
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.77
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	99.76
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	99.76
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.73
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.73
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	99.72
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.72
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	99.71
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.71
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.69
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	99.69
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.69
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.68
d1twua_	137	Hypothetical protein YycE {Bacillus subtilis [TaxI	99.68
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	99.67
d2c21a1	139	Glyoxalase I (lactoylglutathione lyase) {Leishmani	99.67
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.66
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	99.66
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.66
d2pjsa1	111	Uncharacterized protein Atu1953 {Agrobacterium tum	99.64
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.64
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	99.63
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	99.62
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.62
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	99.6
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.51
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	99.5
d1twua_	137	Hypothetical protein YycE {Bacillus subtilis [TaxI	99.5
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.49
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.49
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	99.49
d2pjsa1	111	Uncharacterized protein Atu1953 {Agrobacterium tum	99.48
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.48
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	99.46
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	99.46
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.44
d1ecsa_	120	Bleomycin resistance protein, BRP {Klebsiella pneu	99.44
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.43
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	99.42
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.41
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	99.41
d1jifa_	122	Bleomycin resistance protein, BRP {Streptomyces ve	99.41
d2c21a1	139	Glyoxalase I (lactoylglutathione lyase) {Leishmani	99.39
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.38
d1xy7a_	135	Hypothetical protein At5g48480 {Thale cress (Arabi	99.38
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	99.37
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	99.37
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.35
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.35
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.35
d1xrka_	120	Bleomycin resistance protein, BRP {Streptoalloteic	99.29
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.25
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.25
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.22
d1ecsa_	120	Bleomycin resistance protein, BRP {Klebsiella pneu	99.21
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.2
d1xy7a_	135	Hypothetical protein At5g48480 {Thale cress (Arabi	99.1
d1jifa_	122	Bleomycin resistance protein, BRP {Streptomyces ve	99.1
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.04
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.02
d1xrka_	120	Bleomycin resistance protein, BRP {Streptoalloteic	99.01
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	98.99
d1u6la_	137	Hypothetical protein PA1353 {Pseudomonas aeruginos	98.94
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	98.88
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	98.75
d1u7ia_	134	Hypothetical protein PA1358 {Pseudomonas aeruginos	98.61
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	98.46
d1u6la_	137	Hypothetical protein PA1353 {Pseudomonas aeruginos	98.37
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	98.34
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	98.31
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	98.29
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	98.05
d1tsja_	129	Hypothetical protein MW1090 {Staphylococcus aureus	97.94
d1u7ia_	134	Hypothetical protein PA1358 {Pseudomonas aeruginos	97.7
d1tsja_	129	Hypothetical protein MW1090 {Staphylococcus aureus	97.03
d1u69a_	156	Hypothetical protein PA2721 {Pseudomonas aeruginos	95.9

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=99.82  E-value=3.4e-19  Score=143.42  Aligned_cols=131  Identities=56%  Similarity=1.045  Sum_probs=100.5

Q ss_pred             ceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEEC
Q 018138          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVE  192 (360)
Q Consensus       113 ~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~  192 (360)
                      |+|+||+|.|+|++++++||+++|||++..+............+...........+............+.+..|+++.++
T Consensus         1 Mkl~Hv~i~V~Dl~~s~~FY~~iLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (135)
T d1f9za_           1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVD   80 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEECS
T ss_pred             CcceEEEEEcCCHHHHHHHHHHHhCCEEEeeccccccceeeeeeccceeeeccccccccccccccccccccceeeccchH
Confidence            68999999999999999999999999999877666665555666554433333343333333333344567889999999


Q ss_pred             CHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCCCCC
Q 018138          193 DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPE  243 (360)
Q Consensus       193 Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~~~~  243 (360)
                      +++++.++++++|..+..+|...++++..++|++|||||.|||++.++...
T Consensus        81 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~q~~~~~~  131 (135)
T d1f9za_          81 NAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDAGR  131 (135)
T ss_dssp             CHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC-----
T ss_pred             HHHHHHHHHHHcCCCeecCCccccCCCeEEEEEECCCCCEEEEEECCCccc
Confidence            999999999999999999888888777778999999999999999876433

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=99.78  E-value=4.7e-18  Score=139.76  Aligned_cols=126  Identities=21%  Similarity=0.265  Sum_probs=95.5

Q ss_pred             ccccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeC-----------CCCCeEEEEEeeCCCCceEEEEEEe---cCC
Q 018138          109 KSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDI-----------PEDRYTNAFLGYGPEDSHFVVELTY---NYG  174 (360)
Q Consensus       109 ~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~-----------~~~~~~~~~l~~g~~~~~~~lel~~---~~~  174 (360)
                      ...+++|+||+|.|+|++++.+||++ |||++..+...           .......+++......  ..+++.+   ...
T Consensus         4 ~~~~~ri~Hv~i~v~Dle~s~~FY~~-LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~l~~~~~~~~   80 (149)
T d1ss4a_           4 KNKLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGH--SRIELSRFLTPPT   80 (149)
T ss_dssp             TCCEEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSS--CEEEEEEEEESCC
T ss_pred             CCCCCEEeEEEEEeCCHHHHHHHHHH-cCCcEeeeeccceeeeeeeeccCCCceeEEEEeecccc--eEEEEEeeccccC
Confidence            35678999999999999999999998 99999876432           1234456777655433  3444443   111


Q ss_pred             CC----CCcCCCcceEEEEEECCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeec
Q 018138          175 VD----KYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (360)
Q Consensus       175 ~~----~~~~g~g~~hi~f~V~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~  238 (360)
                      ..    ......|+.|++|.|+|+++++++|+++|+++..+|....++. ..+|++||||+.|||+|.
T Consensus        81 ~~~~~~~~~~~~g~~hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~-~~~~~~DPdG~~iEl~e~  147 (149)
T d1ss4a_          81 IADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENSY-RLCYIRGVEGILIGLAEE  147 (149)
T ss_dssp             CCBCTTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETTTE-EEEEEECGGGCEEEEEEE
T ss_pred             cccccccCCCCcceeEEEEeechhHHHHHHHHHCCCeEccCCeECCCCe-EEEEEECCCCCEEEEEEc
Confidence            11    1123357899999999999999999999999998888776654 468999999999999985

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.77  E-value=6.2e-18  Score=142.02  Aligned_cols=147  Identities=17%  Similarity=0.195  Sum_probs=106.6

Q ss_pred             cccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEE
Q 018138          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGI  189 (360)
Q Consensus       110 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f  189 (360)
                      |..++++||+|.|+|++++++||+++|||++.++...........++..+.....  .......      ...+++|++|
T Consensus         1 m~~~rldHv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~------~~~~~~h~~~   72 (162)
T d1mpya2           1 MAAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHD--VAFIHHP------EKGRLHHVSF   72 (162)
T ss_dssp             TCCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSBSCS--EEEEECS------SSSEEEEEEE
T ss_pred             CCcccccEEEEECCCHHHHHHHHHHccCCEEEEEEccccccceeeeeeccccccc--ccccccC------CCCccceeEE
Confidence            4568899999999999999999999999999987666666555666665543322  2222211      2236899999


Q ss_pred             EECCHH---HHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCCCCC-CceeceeeecCHHHHHHHhhh
Q 018138          190 AVEDVA---KTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPE-PLCQVMLRVGDLDRAINFYKK  264 (360)
Q Consensus       190 ~V~Dld---~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~~~~-~i~hv~L~V~D~e~a~~FY~~  264 (360)
                      .+.+++   +++++|+++|+++..+|..+..|...++||+|||||.|||+....... ...-+........++..||..
T Consensus        73 ~~~~~~~~~~~~~~L~~~gv~~~~~p~~~~~g~~~~~y~~DPdGn~iEl~~~~~~~~p~~~p~~w~~~~~~~~~~~~~r  151 (162)
T d1mpya2          73 HLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGGDYNYPDHKPVTWTTDQLGKAIFYHDR  151 (162)
T ss_dssp             ECSCHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECCCBCCTTSCCEEEEGGGHHHHHCTTTC
T ss_pred             EEeeehhhhhHHHHHHHcCCccccCccccCCCCeEEEEEECCCCCEEEEEECCcccCCCCCCccCCHHHCCceeEecCC
Confidence            998754   778999999999998888877776668999999999999998765321 111122344556666666654

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.77  E-value=1.2e-17  Score=136.99  Aligned_cols=128  Identities=14%  Similarity=0.154  Sum_probs=92.7

Q ss_pred             ccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCC-CeEEEEEeeCCCCceEEEEEEecCCCCCCcCC-CcceEEE
Q 018138          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPED-RYTNAFLGYGPEDSHFVVELTYNYGVDKYDIG-TGFGHFG  188 (360)
Q Consensus       111 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~-~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g-~g~~hi~  188 (360)
                      .+.+|+||+|.|+|++++++||+++|||++..+....+. .....+++.........+.+.......+...+ .+++|++
T Consensus         3 ~i~gl~Hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Hia   82 (144)
T d1zswa1           3 EIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRTYRGTNAITRIG   82 (144)
T ss_dssp             CCCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEEE
T ss_pred             cccceeeEEEEeCCHHHHHHHHHHHhCCeeEeeeccccCCceeEEEecccccceeeEEeecccccccCCccCCCceeEEE
Confidence            478999999999999999999999999999877543332 22334444433334445666554433322333 3589999


Q ss_pred             EEECC---HHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCCC
Q 018138          189 IAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  241 (360)
Q Consensus       189 f~V~D---ld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~~  241 (360)
                      |+|+|   ++++.++|++.|+.+.. +.... + ...+||+||||+.|||++..+.
T Consensus        83 f~v~~~~~l~~~~~~l~~~gv~~~~-~~~~~-~-~~~~yf~DPdG~~iEl~~~~~~  135 (144)
T d1zswa1          83 LLVPSEDSLHYWKERFEKFDVKHSE-MTTYA-N-RPALQFEDAEGLRLVLLVSNGE  135 (144)
T ss_dssp             EEESCHHHHHHHHHHHHHTTCEECC-SEEET-T-EEEEEEECTTCCEEEEEECTTC
T ss_pred             EecCCchhHHHHhhhhhccceeeeC-ccccC-C-eEEEEEECCCCCEEEEEEeCCC
Confidence            99998   77889999999998754 44443 3 3469999999999999987653

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.76  E-value=2.9e-18  Score=135.70  Aligned_cols=115  Identities=18%  Similarity=0.138  Sum_probs=90.8

Q ss_pred             ceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEEC
Q 018138          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVE  192 (360)
Q Consensus       113 ~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~  192 (360)
                      |+|.|+.|.|+|++++.+||+++||+++....+    .  .+.+..|+    ..+.+......+....+ ...+++|.|+
T Consensus         1 m~l~~i~i~V~di~~a~~FYe~~lg~~~~~~~~----~--~~~~~~g~----~~l~l~~~~~~~~~~~~-~~~~~~f~v~   69 (115)
T d2i7ra1           1 MNLNQLDIIVSNVPQVCADLEHILDKKADYAND----G--FAQFTIGS----HCLMLSQNHLVPLENFQ-SGIIIHIEVE   69 (115)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET----T--EEEEEETT----EEEEEESSCSSSCCCCC-SCEEEEEECS
T ss_pred             CcceEEEEEECCHHHHHHHHHHhhCCceeeecC----C--eEEEEEcC----ceeeeeecccCCCCCCC-cceEEEEEEC
Confidence            579999999999999999999999999875432    2  35666653    35666554433322223 3358999999


Q ss_pred             CHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecC
Q 018138          193 DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (360)
Q Consensus       193 Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~  239 (360)
                      |+++++++|+++|+++..+|...++|.+ .++|+|||||.||+++.+
T Consensus        70 D~d~~~~~l~~~G~~i~~~~~~~~~g~~-~~~~~DPdGn~ie~~~~k  115 (115)
T d2i7ra1          70 DVDQNYKRLNELGIKVLHGPTVTDWGTE-SLLVQGPAGLVLDFYRMK  115 (115)
T ss_dssp             CHHHHHHHHHHHTCCEEEEEEECTTSCE-EEEEECGGGCEEEEEECC
T ss_pred             CHHHHHHHHHhhccccccceEEeeCCeE-EEEEECCCCCEEEEEEeC
Confidence            9999999999999999999998888865 589999999999999853

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=99.76  E-value=5.1e-18  Score=138.59  Aligned_cols=129  Identities=19%  Similarity=0.294  Sum_probs=95.1

Q ss_pred             cccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeC--CCCceEEEEEEecCCCCC--------Cc
Q 018138          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYG--PEDSHFVVELTYNYGVDK--------YD  179 (360)
Q Consensus       110 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g--~~~~~~~lel~~~~~~~~--------~~  179 (360)
                      .|+++|+||+|.|+|++++++||+++||+++......+......++....  .......+++.+......        ..
T Consensus         3 ~m~~~i~Hi~i~v~Dl~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~   82 (145)
T d1jc4a_           3 DLFICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHN   82 (145)
T ss_dssp             CCCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTT
T ss_pred             ccceEEeEEEEEeCCHHHHHHHHHhhccCceeeeeeecccceEEEeeeceeccccccchhhhhhhhcccCcccccccccC
Confidence            57899999999999999999999999999998776655555444443321  112234677766432221        12


Q ss_pred             CCCcceEEEEEECCHHHHHHHHHHcCCeEecCC-eecCCCCEEEEEE--ECCCCCEEEEeecC
Q 018138          180 IGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREP-GPVKGGNTVIAFI--EDPDGYKFELLERG  239 (360)
Q Consensus       180 ~g~g~~hi~f~V~Dld~~~~rL~~~G~~~~~~p-~~~~~g~~~~~~~--~DPdG~~iEl~~~~  239 (360)
                      ...|++|+||.|+|+++++++|+++|+++..++ ....+| +..+|+  +||+|+.|||+|.+
T Consensus        83 ~~~g~~Hia~~v~di~~~~~~l~~~Gv~~~~~~~~~~~~g-~~~~f~~p~dp~G~~iEl~e~p  144 (145)
T d1jc4a_          83 GRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGG-NRINFMHPKSGKGVLIELTQYP  144 (145)
T ss_dssp             TCCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSS-CEEEEBCGGGGTTSCEEEEECC
T ss_pred             CCCcceEEEEecchHHHHHHHHHHCCCEEeCCCceECCCC-CEEEEEeccCCCCeEEEEEECC
Confidence            356899999999999999999999999987654 333444 445555  79999999999964

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=99.73  E-value=1.4e-17  Score=134.85  Aligned_cols=114  Identities=19%  Similarity=0.237  Sum_probs=89.4

Q ss_pred             ccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEE
Q 018138          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  190 (360)
Q Consensus       111 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~  190 (360)
                      +|++|+||+|.|+|++++++||+++|||++..+.+      ..++++++..  ++.+.+.+..       ..++.|++|.
T Consensus         1 ~I~~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~--~~~l~l~~~~-------~~~~~h~~f~   65 (131)
T d1lgta1           1 SIRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD------NGDLFRIDSR--AWRIAVQQGE-------VDDLAFAGYE   65 (131)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSB--SCSEEEEECT-------TCEEEEEEEE
T ss_pred             CcccccEEEEEeCCHHHHHHHHHHhhCCceeecCC------cceEEeecCC--ceEEEEecCC-------CCCceEEEEE
Confidence            36899999999999999999999999999987643      2477887653  3455555432       2478999999


Q ss_pred             EC---CHHHHHHHHHHcCCeEecCCeecC--CCCEEEEEEECCCCCEEEEeecC
Q 018138          191 VE---DVAKTVDLVKAKGGKVTREPGPVK--GGNTVIAFIEDPDGYKFELLERG  239 (360)
Q Consensus       191 V~---Dld~~~~rL~~~G~~~~~~p~~~~--~g~~~~~~~~DPdG~~iEl~~~~  239 (360)
                      |.   |++++.++|+++|+++...|....  .+....+||+|||||.||++...
T Consensus        66 v~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~f~DPdGn~iE~~~~~  119 (131)
T d1lgta1          66 VADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYGA  119 (131)
T ss_dssp             ESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECC
T ss_pred             EccHHHHHHHHHHHHHcCCceEECCccccccCCceEEEEEECCCCCEEEEEeCC
Confidence            96   478889999999999988876532  23334689999999999998654

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.73  E-value=3.5e-17  Score=138.55  Aligned_cols=122  Identities=21%  Similarity=0.204  Sum_probs=86.3

Q ss_pred             cccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEE
Q 018138          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGI  189 (360)
Q Consensus       110 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f  189 (360)
                      ..+++|+||+|.|+|++++++||+++|||++..+.+    .+ .+|...+... ...+.+.............+++|++|
T Consensus         8 ~~I~Gl~HV~L~V~Dle~s~~FY~~vLG~~~~~~~~----~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~HiAf   81 (170)
T d1zswa2           8 HQIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRND----QE-AIFQSIKGEA-FGEIVVKYLDGPTEKPGRGSIHHLAI   81 (170)
T ss_dssp             GSCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS----SE-EEEESSTTCS-TTCEEEEECCSSBCBCCBTCEEEEEE
T ss_pred             HHhCCeeeEEEEeCCHHHHHHHHHHHhCCEEEeecC----ce-EEEEeccCcc-ceEEEeccccccccccCccccceEEE
Confidence            457899999999999999999999999999987632    22 2343333222 22233333222222222346899999


Q ss_pred             EECC---HHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCC
Q 018138          190 AVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (360)
Q Consensus       190 ~V~D---ld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~  240 (360)
                      .|+|   ++++.++++++|+++. ++...  +..+.+||+|||||.|||+...+
T Consensus        82 ~V~~~~~l~~~~~~l~~~G~~~~-~~~~~--~~~~s~Yf~DPdG~~iEl~t~~p  132 (170)
T d1zswa2          82 RVKNDAELAYWEEQVKQRGFHSS-GIIDR--FYFKSLYFRESNGILFEIATDGP  132 (170)
T ss_dssp             EESSHHHHHHHHHHHHHTTCCCC-CCEEC--SSEEEEEEECTTCCEEEEEEEEE
T ss_pred             EeCChHHHHHHHHHHHhcCCCcc-ccccC--CCEEEEEEECCCCcEEEEEECCC
Confidence            9986   8888999999999875 33333  33457899999999999998643

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=99.72  E-value=5e-17  Score=130.74  Aligned_cols=119  Identities=16%  Similarity=0.232  Sum_probs=87.1

Q ss_pred             ccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCC-CCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEE
Q 018138          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE-DRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGI  189 (360)
Q Consensus       111 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~-~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f  189 (360)
                      |+.+|+||+|.|+|++++.+||+++|||++..+.+... ......++..+.    ..+++.....    ....+..|++|
T Consensus         1 Mi~~i~Hi~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~----~~~~~~~~~~f   72 (130)
T d1r9ca_           1 MIEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGD----IWVAIMQGEK----LAERSYNHIAF   72 (130)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEETT----EEEEEEECCC----CSSCCSCEEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHhcCCEEEEEcCCccccceeEEEEecCC----EEEeeccccc----ccccceeeeee
Confidence            67899999999999999999999999999987754332 223345555542    3455544322    12346789999


Q ss_pred             EEC--CHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeec
Q 018138          190 AVE--DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (360)
Q Consensus       190 ~V~--Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~  238 (360)
                      .++  |+++++++|+++|+++..++....++.+ .+||+|||||.|||.+.
T Consensus        73 ~v~~~dv~~~~~~l~~~gv~i~~~~~~~~~~~~-~~~~~DPdGn~iEl~~~  122 (130)
T d1r9ca_          73 KIDDADFDRYAERVGKLGLDMRPPRPRVEGEGR-SIYFYDDDNHMFELHTG  122 (130)
T ss_dssp             ECCGGGHHHHHHHHHHHTCCBCCCCC-----CC-EEEEECTTSCEEEEECC
T ss_pred             cccHHHHHHHHHHHHHCCCeEecCCcccCCCEE-EEEEECCCCCEEEEEEC
Confidence            885  7999999999999998776555444444 58999999999999764

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.72  E-value=2.6e-17  Score=135.61  Aligned_cols=118  Identities=22%  Similarity=0.282  Sum_probs=91.3

Q ss_pred             cccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEE
Q 018138          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGI  189 (360)
Q Consensus       110 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f  189 (360)
                      ..+++|+||.|.|+|++++++||+++|||++..+..    .  ..++.......++.+.+....       ..+++|++|
T Consensus        12 ~~i~rl~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~-------~~~~~h~~~   78 (146)
T d1f1ua1          12 PDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE----N--TIYLRSLEEFIHHNLVLRQGP-------IAAVAAFAY   78 (146)
T ss_dssp             CCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS----S--EEEEECTTCCSSCSEEEEECS-------SCEEEEEEE
T ss_pred             CCCcEEeEEEEEeCCHHHHHHHHHhccCcEEEeecC----C--ceeeecccccccceeeccccC-------CCCCceeeE
Confidence            347899999999999999999999999999986532    1  244444333334444443321       247899999


Q ss_pred             EEC---CHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCC
Q 018138          190 AVE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (360)
Q Consensus       190 ~V~---Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~  240 (360)
                      .+.   |++++.++|+++|+++...+.....|....+||+|||||.|||+...+
T Consensus        79 ~~~~~~dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~e  132 (146)
T d1f1ua1          79 RVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYETE  132 (146)
T ss_dssp             EESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCBC
T ss_pred             eeccchhHHHHHHHHHHcCCceeeccccccCCceEEEEEECCCCcEEEEEEecc
Confidence            996   589999999999999988877777665457899999999999998644

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=1.9e-16  Score=134.17  Aligned_cols=127  Identities=32%  Similarity=0.543  Sum_probs=95.1

Q ss_pred             cceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCC-----------------ceEEEEEEecC-
Q 018138          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPED-----------------SHFVVELTYNY-  173 (360)
Q Consensus       112 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~-----------------~~~~lel~~~~-  173 (360)
                      ..+++|++|.|+|++++++||+++|||++..+...+...+..++...+...                 ....+...... 
T Consensus        21 ~~~l~Hi~l~V~Dl~~si~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  100 (176)
T d1qipa_          21 DFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTE  100 (176)
T ss_dssp             TCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETTGG
T ss_pred             ceEEeEEEEEeCCHHHHHHHHHHhhCCeEeeeecccCCceEEEEeecCCccccccccccccccccccccceeEEEeeccc
Confidence            457999999999999999999999999999887777777777777654321                 11112222111 


Q ss_pred             --CCCC----CcCCCcceEEEEEECCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCC
Q 018138          174 --GVDK----YDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (360)
Q Consensus       174 --~~~~----~~~g~g~~hi~f~V~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~  240 (360)
                        ....    .....|+.|+++.++|+++++++|+++|+++..+|.......  ++|++|||||.|||+|+..
T Consensus       101 ~~~~~~~~~~~~~~~g~~h~~~~~~d~~~~~~~l~~~Gv~~~~~p~~g~~~~--~~f~~DPdG~~IElvq~~~  171 (176)
T d1qipa_         101 DDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKG--LAFIQDPDGYWIEILNPNK  171 (176)
T ss_dssp             GCTTCCCBCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCEEEECTTSSSSTT--CEEEECTTCCEEEEECTTT
T ss_pred             cccCcCccCCCCCccceeEEEeeHHHHHHHHHHHHHCCCEEeeCCccCCceE--EEEEECCCCCEEEEEeCCC
Confidence              1111    112358899999999999999999999999999887644433  4889999999999999875

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.71  E-value=3.7e-17  Score=132.53  Aligned_cols=114  Identities=15%  Similarity=0.189  Sum_probs=89.0

Q ss_pred             ccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEE
Q 018138          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  190 (360)
Q Consensus       111 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~  190 (360)
                      .+.+|+||+|.|+|++++++||+++|||++..+.+      ..+|++++..  ++.+.+...       ...++.|++|.
T Consensus         1 ~i~~L~hv~i~v~Dl~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~--~~~l~~~~~-------~~~~~~h~~f~   65 (132)
T d1kw3b1           1 SIERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG------DAALYRADQR--AWRIAVQPG-------ELDDLAYAGLE   65 (132)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSB--SCSEEEEEC-------TTCEEEEEEEE
T ss_pred             CcccccEEEEEeCCHHHHHHHHHHHhCCceecccc------ceeeeeeeec--ceeeeeecc-------CCCCceEEEEE
Confidence            36899999999999999999999999999987643      2478887654  334544442       23478999999


Q ss_pred             EC---CHHHHHHHHHHcCCeEecCCeecCC--CCEEEEEEECCCCCEEEEeecC
Q 018138          191 VE---DVAKTVDLVKAKGGKVTREPGPVKG--GNTVIAFIEDPDGYKFELLERG  239 (360)
Q Consensus       191 V~---Dld~~~~rL~~~G~~~~~~p~~~~~--g~~~~~~~~DPdG~~iEl~~~~  239 (360)
                      |+   |++++.++++++|+++.+.+.....  +....+||+||+||.||++...
T Consensus        66 v~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdGn~iE~~~~~  119 (132)
T d1kw3b1          66 VDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYGP  119 (132)
T ss_dssp             CSSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECC
T ss_pred             eccHHHHHHHHHHHHHcCCCceecCccccccCCcceEEEEECCCCCEEEEEECC
Confidence            96   4888999999999999987765432  2234689999999999999654

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.69  E-value=2.4e-16  Score=134.14  Aligned_cols=119  Identities=20%  Similarity=0.251  Sum_probs=93.6

Q ss_pred             cceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEE
Q 018138          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (360)
Q Consensus       112 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V  191 (360)
                      ++||+||+|.|+|++++++|| ++|||++.++...+......+|+..+..  ++.+.+...+       ..+++|++|.+
T Consensus         3 i~rl~Hv~l~v~Dle~s~~FY-e~LGf~~~d~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~-------~~~~~H~~f~~   72 (176)
T d1f1ua2           3 LVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQT--VHDTALTGGN-------GPRMHHVAFAT   72 (176)
T ss_dssp             CCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSS--SCSEEEEESS-------BSEEEEEEEEC
T ss_pred             eeEeeeEEEEcCCHHHHHHHH-HHCCCEEEEEEecCCcceeeeeeccCcc--ccceeccccc-------CCCccceeEEe
Confidence            679999999999999999999 6899999887766666666677776543  4455555432       34789999999


Q ss_pred             CC---HHHHHHHHHHcCCe--EecCCeecCCCCEEEEEEECCCCCEEEEeecCC
Q 018138          192 ED---VAKTVDLVKAKGGK--VTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (360)
Q Consensus       192 ~D---ld~~~~rL~~~G~~--~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~  240 (360)
                      .+   +.++.++|+++|+.  ....|+++..|...++||+|||||.|||+....
T Consensus        73 ~~~~~v~~~~~~l~~~g~~~~~~~~p~~h~~g~~~~~Y~~DPdG~~iEl~~~~~  126 (176)
T d1f1ua2          73 HEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQDY  126 (176)
T ss_dssp             SSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECCC
T ss_pred             ccchhHHHHHHHHHHcCCceeeeecccccCCCCceEEEEECCCCCEEEEEeCCc
Confidence            86   55667899999985  456777777776678999999999999998654

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=99.69  E-value=1.3e-16  Score=124.83  Aligned_cols=108  Identities=20%  Similarity=0.265  Sum_probs=80.6

Q ss_pred             ceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEEC
Q 018138          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVE  192 (360)
Q Consensus       113 ~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~  192 (360)
                      ++|+||.|.|+|++++++||+++|||++..+.+.   .  .+++. ++.  ++.+.+......    ...+..|++|.|+
T Consensus         2 m~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~~~---~--~~~~~-~~~--~~~~~~~~~~~~----~~~~~~h~~f~v~   69 (113)
T d1xqaa_           2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRGN---A--FAVMR-DND--GFILTLMKGKEV----QYPKTFHVGFPQE   69 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEETT---T--EEEEE-CTT--CCEEEEEECSSC----CCCTTCCEEEECS
T ss_pred             CcccEEEEEeCCHHHHHHHHHHhhCCEEEEeecC---c--ceeee-ecc--eeeeeeeeeecc----cccccceeeeeec
Confidence            6899999999999999999999999999876431   1  24443 222  345666554322    2346789999998


Q ss_pred             C---HHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEe
Q 018138          193 D---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  236 (360)
Q Consensus       193 D---ld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~  236 (360)
                      |   ++++.++++++|+++..+|.  ..+  +.+||+|||||.|||.
T Consensus        70 ~~~~v~~~~~~l~~~G~~~~~~~~--~~~--~~~~~~DPdG~~iEi~  112 (113)
T d1xqaa_          70 SEEQVDKINQRLKEDGFLVEPPKH--AHA--YTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             SHHHHHHHHHHHHHTTCCCCCCEE--C-C--EEEEEEETTTEEEEEE
T ss_pred             cccchhhhhhhHHHcCCccccCCC--Cce--EEEEEECCCCCEEEEE
Confidence            7   77889999999999765533  222  3589999999999996

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.69  E-value=3.5e-16  Score=130.45  Aligned_cols=124  Identities=25%  Similarity=0.289  Sum_probs=92.4

Q ss_pred             ccccccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeC---CCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCc
Q 018138          107 WVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDI---PEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTG  183 (360)
Q Consensus       107 ~~~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~---~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g  183 (360)
                      ++-+...+|+||+|.|+|++++++||+++|||++..+...   ........++.++..  ++.+.+...+      ...+
T Consensus         3 ~~~~~~~GlgHv~l~v~D~e~t~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~a~~~~~------~~~g   74 (156)
T d1kw3b2           3 GFVTGDQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGR--HHTIALAAFP------IPKR   74 (156)
T ss_dssp             CBCCGGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSB--SCSEEEECCS------CSSS
T ss_pred             ccCCCCCCcceEEEecCCHHHHHHHHHHhcCceeeeEEeeccCCCCcceeEEEeeccc--cceeeeccCC------CCCc
Confidence            3456778999999999999999999999999999865321   122334566666543  3445554332      1247


Q ss_pred             ceEEEEEECC---HHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCC-EEEEeecC
Q 018138          184 FGHFGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGY-KFELLERG  239 (360)
Q Consensus       184 ~~hi~f~V~D---ld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~-~iEl~~~~  239 (360)
                      ++|++|+|++   +.+++++|+++|+.+ ..|.++..+...++|++||+|+ .+|+....
T Consensus        75 l~Hiaf~v~~~ddv~~~~d~l~~~G~~~-~g~~rH~~~~~~s~Y~~DP~G~~~~E~~~~~  133 (156)
T d1kw3b2          75 IHHFMLQANTIDDVGYAFDRLDAAGRIT-SLLGRHTNDQTLSFYADTPSPMIEVEFGWGP  133 (156)
T ss_dssp             EEEEEEEBSSHHHHHHHHHHHHHTTCBC-BCSEEESSSCCEEEEEECSSTTCEEEEEECC
T ss_pred             eeEEEEECCCHHHHHHHHHHHHhcCCce-ecCcccCCCCeEEEEEECCCCCeEEEEecCC
Confidence            9999999975   566799999999864 5778887666678999999998 69998754

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.68  E-value=1.6e-16  Score=130.32  Aligned_cols=119  Identities=24%  Similarity=0.298  Sum_probs=85.9

Q ss_pred             cccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEE
Q 018138          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGI  189 (360)
Q Consensus       110 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f  189 (360)
                      ..+++|+||.|.|+|++++++||+++|||++..+...  ..   .+........++.+.+....       ..+..|+++
T Consensus         3 ~~i~rl~Hv~l~v~D~~~s~~FY~~vLG~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~   70 (145)
T d1mpya1           3 KGVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQ--GR---VYLKAWTEVDKFSLVLREAD-------EPGMDFMGF   70 (145)
T ss_dssp             TSEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECTT--SC---EEEECTTCCBSCSEEEEECS-------SCEEEEEEE
T ss_pred             cCCcEeeeEEEEeCCHHHHHHHHHHhhCCEEEEeecc--Cc---cceecccccceeeccccccC-------cccceeeee
Confidence            4589999999999999999999999999999865331  11   23333333333344444322       124567766


Q ss_pred             EE---CCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCC
Q 018138          190 AV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (360)
Q Consensus       190 ~V---~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~  240 (360)
                      .+   +|+++++++|+++|+++...|.....|....+||+|||||.|||+....
T Consensus        71 ~~~~~~dl~~~~~~L~~~g~~~~~~~~~~~~g~~~~~~f~DPdG~~iEl~~~~e  124 (145)
T d1mpya1          71 KVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYADKE  124 (145)
T ss_dssp             EESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBC
T ss_pred             eehhHHHHHHHHHHHHHCCCcEEECCCcccCCceEEEEEECCCCCEEEEEEecc
Confidence            66   4699999999999999887766555554347999999999999997543

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

Probab=99.68  E-value=1.8e-16  Score=128.95  Aligned_cols=118  Identities=22%  Similarity=0.317  Sum_probs=87.9

Q ss_pred             EEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEECC---H
Q 018138          118 VVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVED---V  194 (360)
Q Consensus       118 V~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~D---l  194 (360)
                      |++.|.|++++++||+++|||++..+...+ ..+..+++..+..  .+.+.+...........+.+.+|++|.|+|   +
T Consensus        13 Va~pv~Dle~s~~FY~~vLG~~~~~~~~~~-~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~hlaf~v~~~~dv   89 (137)
T d1twua_          13 IARPTGQLDEIIRFYEEGLCLKRIGEFSQH-NGYDGVMFGLPHA--DYHLEFTQYEGGSTAPVPHPDSLLVFYVPNAVEL   89 (137)
T ss_dssp             EEEECSCHHHHHHHHTTTSCCCEEEEEEEE-TTEEEEEEESSSS--SEEEEEEEETTCCCCCCCCTTCEEEEECCCHHHH
T ss_pred             EecccCCHHHHHHHHHhccCCceeeeeccc-cceeEEEecCCCC--ceeeecccccccccccccccCceEEEEeCCHHHH
Confidence            445568999999999999999998765433 3466777775543  456777665544443445567899999976   7


Q ss_pred             HHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCC
Q 018138          195 AKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (360)
Q Consensus       195 d~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~  240 (360)
                      ++++++|+++|+++..++.... +.+ .+||+||||+.|||.....
T Consensus        90 ~~~~~~l~~~G~~~~~~~~~~~-~~~-~~~f~DPDG~~Iel~~~~~  133 (137)
T d1twua_          90 AAITSKLKHMGYQEVESENPYW-SNG-GVTIEDPDGWRIVFMNSKG  133 (137)
T ss_dssp             HHHHHHHHHTTCCEECCSSHHH-HSS-EEEEECTTCCEEEEESSCC
T ss_pred             HHHHHHHHHCCCeEeCCCCCCC-Cce-EEEEECCCCCEEEEEcCCC
Confidence            8889999999999887665433 333 5899999999999997654

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=99.67  E-value=4.3e-16  Score=126.90  Aligned_cols=116  Identities=22%  Similarity=0.342  Sum_probs=85.0

Q ss_pred             ccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEE
Q 018138          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  190 (360)
Q Consensus       111 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~  190 (360)
                      |+++|+||+|.|+|++++++||+++|||++..+...      ..++..+.  ....+.+...... ......+..|++|.
T Consensus         1 Mi~~l~Hi~l~v~d~~~~~~FY~~vLG~~~~~~~~~------~~~~~~~~--~~~~l~~~~~~~~-~~~~~~~~~h~~~~   71 (140)
T d1npba_           1 MLQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWNT------GAYLTCGD--LWVCLSYDEARQY-VPPQESDYTHYAFT   71 (140)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEETT------EEEEEETT--EEEEEEECTTCCC-CCGGGSCSCEEEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHHhCCEEEEEecc------cccccccc--ccceeeccccccc-CCCcCCccceeeee
Confidence            678999999999999999999999999999865431      24555543  2334444332221 11233467888888


Q ss_pred             E--CCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecC
Q 018138          191 V--EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (360)
Q Consensus       191 V--~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~  239 (360)
                      +  +|+++++++|+++|+++...+.   +++ ..+||+|||||.|||....
T Consensus        72 ~~~~d~~~~~~~l~~~Gv~~~~~~~---~~~-~~~~~~DPdGn~iEi~~~~  118 (140)
T d1npba_          72 VAEEDFEPLSQRLEQAGVTIWKQNK---SEG-ASFYFLDPDGHKLELHVGS  118 (140)
T ss_dssp             CCHHHHHHHHHHHHHTTCCEEECCC---SSS-EEEEEECTTCCEEEEEECC
T ss_pred             chHHHHHHHHHHHHHCCCeEeecCC---CCc-eEEEEECCCCCEEEEEECC
Confidence            8  5799999999999999876543   233 3689999999999997643

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

Probab=99.67  E-value=1e-15  Score=122.95  Aligned_cols=122  Identities=55%  Similarity=0.917  Sum_probs=88.5

Q ss_pred             ceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEEC
Q 018138          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVE  192 (360)
Q Consensus       113 ~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~  192 (360)
                      +||.||+|.|+|++++++||+++|||++..+..........................................++++.++
T Consensus         2 ~r~~Hv~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (139)
T d2c21a1           2 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIAIGVE   81 (139)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEEES
T ss_pred             CceEEEEEEeCCHHHHHHHHHHHhCCEeeccccccccceeeeeecccccccccccccccccCcccccCCCccceeeeehh
Confidence            68999999999999999999999999998876655544444454444333222222222222222334456778999999


Q ss_pred             CHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecC
Q 018138          193 DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (360)
Q Consensus       193 Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~  239 (360)
                      ++.++++++...++++..++    ++. .++||+|||||.|||++..
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~----~g~-~~~~~~DPdGn~iEl~~~~  123 (139)
T d2c21a1          82 DVKELVADMRKHDVPIDYED----ESG-FMAFVVDPDGYYIELLNEK  123 (139)
T ss_dssp             CHHHHHHHHHHTTCCEEEEC----SSS-SEEEEECTTSCEEEEEEHH
T ss_pred             hHHHHHHHHHHcCCceeeCC----CCc-EEEEEECCCCCEEEEEECC
Confidence            99999999999998876542    233 4699999999999999864

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=2.1e-16  Score=130.43  Aligned_cols=127  Identities=20%  Similarity=0.305  Sum_probs=94.4

Q ss_pred             ccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCC--CeEEEEEeeCCCCceEEEEEEecCCCCC-------CcCC
Q 018138          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPED--RYTNAFLGYGPEDSHFVVELTYNYGVDK-------YDIG  181 (360)
Q Consensus       111 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~--~~~~~~l~~g~~~~~~~lel~~~~~~~~-------~~~g  181 (360)
                      .+.+++||+|.|+|++++++||+++|||+++.+...+..  ....+.+..+  .  ..+++........       ...+
T Consensus         8 ~~~~~dHi~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~l~~~~~~~~~~~~~~~~~~g   83 (149)
T d1sqia1           8 RFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQG--K--IVFVLCSALNPWNKEMGDHLVKHG   83 (149)
T ss_dssp             EEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEET--T--EEEEEEEESSTTCHHHHHHHHHHC
T ss_pred             ceeeEeEEEEEcCCHHHHHHHHhhccceEEEEEecccCCceEEEEEEecCC--c--EEEEEEeccCCCCchhhhhhhhCC
Confidence            367899999999999999999999999999876544332  2233344433  2  3455544322111       1246


Q ss_pred             CcceEEEEEECCHHHHHHHHHHcCCeEecCCeecCC--CCEEEEEEECCCCCEEEEeecCCC
Q 018138          182 TGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKG--GNTVIAFIEDPDGYKFELLERGPT  241 (360)
Q Consensus       182 ~g~~hi~f~V~Dld~~~~rL~~~G~~~~~~p~~~~~--g~~~~~~~~DPdG~~iEl~~~~~~  241 (360)
                      .|++|+||.|+|+++++++|+++|+++..+|....+  |...+++++.|+|..++|+++...
T Consensus        84 ~G~~hiaf~V~di~~~~~~l~~~G~~~~~~P~~~~d~~G~v~~a~i~~~g~~~~~lier~~~  145 (149)
T d1sqia1          84 DGVKDIAFEVEDCEHIVQKARERGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLVEKINY  145 (149)
T ss_dssp             SEEEEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEESC
T ss_pred             CeEEEEEEEeccHHHHHHHHHHCCCEEccCCeEEECCCCeEEEEEEECCCCCEEEEEEeCCC
Confidence            789999999999999999999999999988877644  333467889999999999997653

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.66  E-value=6.5e-16  Score=124.86  Aligned_cols=112  Identities=23%  Similarity=0.384  Sum_probs=81.2

Q ss_pred             ccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEE
Q 018138          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  190 (360)
Q Consensus       111 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~  190 (360)
                      |+.+|+||+|.|+|++++++||+++||+++..+.+.      ..++..+.    ..+.........  ....+..|++|.
T Consensus         1 mi~~i~Hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~------~~~~~~~~----~~~~~~~~~~~~--~~~~~~~h~~~~   68 (134)
T d1nkia_           1 MLTGLNHLTLAVADLPASIAFYRDLLGFRLEARWDQ------GAYLELGS----LWLCLSREPQYG--GPAADYTHYAFG   68 (134)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEETT------EEEEEETT----EEEEEEECTTCC--CCCSSSCEEEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHhhCCeEEEeccc------eeeeecCC----eEEEEeeecccc--ccccccccchhc
Confidence            678999999999999999999999999999876431      35555542    234433322211  223355677766


Q ss_pred             E--CCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeec
Q 018138          191 V--EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (360)
Q Consensus       191 V--~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~  238 (360)
                      +  +|+++++++|+++|+++...+  ...+  ..+||+|||||.|||+..
T Consensus        69 ~~~~dl~~~~~~l~~~G~~~~~~~--~~~~--~~~~f~DPdGn~iEl~~~  114 (134)
T d1nkia_          69 IAAADFARFAAQLRAHGVREWKQN--RSEG--DSFYFLDPDGHRLEAHVG  114 (134)
T ss_dssp             ECHHHHHHHHHHHHHTTCCEEECC--CSSS--CEEEEECTTCCEEEEESC
T ss_pred             cccchHHHHHHHHHHCCCcCccCC--Ccce--eEEEEECCCCCEEEEEEC
Confidence            6  589999999999999986543  2222  358999999999999753

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.66  E-value=4.8e-16  Score=130.79  Aligned_cols=131  Identities=18%  Similarity=0.248  Sum_probs=95.6

Q ss_pred             cccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCC-----------C-C
Q 018138          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV-----------D-K  177 (360)
Q Consensus       110 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~-----------~-~  177 (360)
                      +.+.+++||+|.|+|++++.+||+++|||++..+...+........+..+.....+.+........           . .
T Consensus         8 ~~i~~~dHv~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~   87 (167)
T d1sqda1           8 FKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSAGEIKPTTTASIP   87 (167)
T ss_dssp             SCEEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEETTEEEEEEEECCGGGTTTCCGGGCCCSST
T ss_pred             CCCceEeEEEEEeCCHHHHHHHHHHHhCCeEEEEeeccCCCeeEEEEEeeCCCeeEEEeccccccccccccccccccccc
Confidence            567899999999999999999999999999988765443332233333333332222222111000           0 0


Q ss_pred             -----------CcCCCcceEEEEEECCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCCC
Q 018138          178 -----------YDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  241 (360)
Q Consensus       178 -----------~~~g~g~~hi~f~V~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~~  241 (360)
                                 ...+.|+.||||+|+|+++++++|+++|+++..+|....++. +++++.++++..++|++++..
T Consensus        88 ~~~~~~~~~~~~~~~~G~~Hiaf~VdDi~aa~~~l~~~G~~~~~~P~~~~~~~-~~a~I~~~gd~~~~~v~r~~~  161 (167)
T d1sqda1          88 SFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNEAV-TIAEVKLYGDVVLRYVSYKAE  161 (167)
T ss_dssp             TCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTTE-EEEEEEEETTEEEEEEEECCC
T ss_pred             cCCcchHHHhhhccCCCceEEEEEeCCHHHHHHHHHHCCCEEecCCeecCCCE-EEEEEEccCCcEEEEEecCCC
Confidence                       012468999999999999999999999999999998887664 478999999999999998753

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.64  E-value=3.8e-16  Score=121.55  Aligned_cols=110  Identities=18%  Similarity=0.205  Sum_probs=80.7

Q ss_pred             ceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEEC
Q 018138          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVE  192 (360)
Q Consensus       113 ~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~  192 (360)
                      +++ +..|.|+|++++++||+++|||++..+.+    .+  ..+..+. . ...+.......    ..+.+..|++|.++
T Consensus         2 ~ri-~~~l~v~d~~~a~~FY~~~lG~~~~~~~~----~~--~~~~~~~-~-~~~~~~~~~~~----~~~~~~~~~~~~~~   68 (111)
T d2pjsa1           2 RRV-VANIATPEPARAQAFYGDILGMPVAMDHG----WI--VTHASPL-E-AHAQVSFAREG----GSGTDVPDLSIEVD   68 (111)
T ss_dssp             EEE-EEEEECSCGGGGHHHHTTTTCCCEEEECS----SE--EEEEEEE-E-EEEEEEEESSS----BTTBCCCSEEEEES
T ss_pred             eEE-EEEEEeCCHHHHHHHHHHhhCCceeeccc----ce--eEecccc-c-cceeeeccccc----CCCCceeEEEEEec
Confidence            345 57899999999999999999999986532    22  2222221 1 11111111111    12335568999999


Q ss_pred             CHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEe
Q 018138          193 DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  236 (360)
Q Consensus       193 Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~  236 (360)
                      |+++++++++++|+++..+|...++|.+ .+|++|||||.||++
T Consensus        69 dvd~~~~~l~~~g~~~~~~p~~~~~g~~-~~~~~DP~Gn~iei~  111 (111)
T d2pjsa1          69 NFDEVHARILKAGLPIEYGPVTEAWGVQ-RLFLRDPFGKLINIL  111 (111)
T ss_dssp             CHHHHHHHHHHTTCCCSEEEEECTTSCE-EEEEECTTSCEEEEE
T ss_pred             CHHHHHHHHHhhccccccCCeEcCCCcE-EEEEECCCCCEEEeC
Confidence            9999999999999999999998888866 589999999999986

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.64  E-value=5.6e-16  Score=129.86  Aligned_cols=126  Identities=22%  Similarity=0.306  Sum_probs=96.3

Q ss_pred             ccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCC--CeEEEEEeeCCCCceEEEEEEecCCCCC----------C
Q 018138          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPED--RYTNAFLGYGPEDSHFVVELTYNYGVDK----------Y  178 (360)
Q Consensus       111 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~--~~~~~~l~~g~~~~~~~lel~~~~~~~~----------~  178 (360)
                      .+.+|+||+|.|+|++++++||+++|||+++.....+..  ....+.++.+    ...+++........          .
T Consensus         4 ~i~~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~----~~~i~l~~~~~~~~~~~~~~~~~~~   79 (163)
T d1t47a1           4 PVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNG----SARFVLTSVIKPATPWGHFLADHVA   79 (163)
T ss_dssp             CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEET----TEEEEEEEESSCCSHHHHHHHHHHH
T ss_pred             CCceEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecC----CEEEEEeccCCCCCccccccchhhh
Confidence            478999999999999999999999999999876543322  3344555543    23566665332211          1


Q ss_pred             cCCCcceEEEEEECCHHHHHHHHHHcCCeEecCCeecCC--CCEEEEEEECCCCCEEEEeecCC
Q 018138          179 DIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKG--GNTVIAFIEDPDGYKFELLERGP  240 (360)
Q Consensus       179 ~~g~g~~hi~f~V~Dld~~~~rL~~~G~~~~~~p~~~~~--g~~~~~~~~DPdG~~iEl~~~~~  240 (360)
                      ..+.|+.|+||+|+|+++++++|+++|+++..+|....+  |...++++++|+|..++|+++..
T Consensus        80 ~~g~G~~hiaf~VdDid~a~~~l~~~Ga~~~~~P~~~~d~~G~v~~a~I~~~g~~~~~lier~~  143 (163)
T d1t47a1          80 EHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRTG  143 (163)
T ss_dssp             HHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEEE
T ss_pred             cCCCceEEEEEeeCCHHHHHHHHHHCCCeEEecCcceeCCCCEEEEEEEecCCCceEEEEeccC
Confidence            235789999999999999999999999999988877643  33457899999999999998754

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=99.63  E-value=8.9e-16  Score=123.06  Aligned_cols=118  Identities=19%  Similarity=0.193  Sum_probs=84.5

Q ss_pred             eeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEec------CCCCCCcCCCcceEE
Q 018138          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN------YGVDKYDIGTGFGHF  187 (360)
Q Consensus       114 ~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~------~~~~~~~~g~g~~hi  187 (360)
                      ||+||+|.|+|++++++||++ |||.+......  ..  .+++..+..   ..+.+...      ..........+..|+
T Consensus         2 ri~hv~l~V~D~~~s~~FY~~-Lg~~~~~~~~~--~~--~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   73 (128)
T d1klla_           2 RISLFAVVVEDMAKSMEFYRK-MGVEIPAEADS--AP--HTEAVLDGG---IRLAWDTVETVRSYDPEWQAPTGGHRFAI   73 (128)
T ss_dssp             CCCEEEEEESCHHHHHHHHHH-TTCCCCTTGGG--CS--EEEEECGGG---CEEEEEEHHHHHHHCTTCCCCCSSCSCEE
T ss_pred             eEeEEEEEcCCHHHHHHHHHH-hCCcccccccc--cc--ceeeeccce---eeeeecccccccccCCCCCCCccccceeE
Confidence            789999999999999999977 99988654332  22  233333222   23333321      111111223356799


Q ss_pred             EEEECC---HHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCC
Q 018138          188 GIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (360)
Q Consensus       188 ~f~V~D---ld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~  240 (360)
                      +|.|++   +++++++|+++|+++..+|...++|.+ .+|++|||||.|||+++-|
T Consensus        74 ~~~v~~~~~l~~~~~~l~~~G~~~~~~p~~~~~G~~-~~~~~DPdG~~iel~~p~p  128 (128)
T d1klla_          74 AFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQR-YAIVKDPDGNVVDLFAPLP  128 (128)
T ss_dssp             EEECSSHHHHHHHHHHHHHTTCEEEEEEEECTTSEE-EEEEECTTSCEEEEEEECC
T ss_pred             eeeeccchhhHHHHHHHHhccCccccCCeEcCCCcE-EEEEECCCCCEEEEEecCC
Confidence            999987   777899999999999999988887765 6899999999999998653

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.62  E-value=5e-16  Score=122.54  Aligned_cols=103  Identities=17%  Similarity=0.134  Sum_probs=79.9

Q ss_pred             CceeceeeecCHHHHHHHhhhcceEEeeeccCCC-ccEEEEEE---------eCCcccccCCCCeeEEEEEeCCHHHHHH
Q 018138          244 PLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK-NAVLELTY---------NHGVTEYDKGNGYAQIAIGTDDVYKTAE  313 (360)
Q Consensus       244 ~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~-~~~l~l~~---------~~~~~~~~~g~g~~hiaf~V~Dl~~~~~  313 (360)
                      .+.|+.|.|+|+++|.+||++    +||++.... .....+..         .... +....+...+++|.|+|++++++
T Consensus         2 ~l~~i~i~V~di~~a~~FYe~----~lg~~~~~~~~~~~~~~~g~~~l~l~~~~~~-~~~~~~~~~~~~f~v~D~d~~~~   76 (115)
T d2i7ra1           2 NLNQLDIIVSNVPQVCADLEH----ILDKKADYANDGFAQFTIGSHCLMLSQNHLV-PLENFQSGIIIHIEVEDVDQNYK   76 (115)
T ss_dssp             EEEEEEEECSCHHHHHHHHHH----HHTSCCSEEETTEEEEEETTEEEEEESSCSS-SCCCCCSCEEEEEECSCHHHHHH
T ss_pred             cceEEEEEECCHHHHHHHHHH----hhCCceeeecCCeEEEEEcCceeeeeecccC-CCCCCCcceEEEEEECCHHHHHH
Confidence            478999999999999999999    999986532 11222222         1111 11112233589999999999999


Q ss_pred             HHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcC
Q 018138          314 AIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  352 (360)
Q Consensus       314 ~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  352 (360)
                      +++++|+++..+|...|++ .+.+||+|||||.|||.+.
T Consensus        77 ~l~~~G~~i~~~~~~~~~g-~~~~~~~DPdGn~ie~~~~  114 (115)
T d2i7ra1          77 RLNELGIKVLHGPTVTDWG-TESLLVQGPAGLVLDFYRM  114 (115)
T ss_dssp             HHHHHTCCEEEEEEECTTS-CEEEEEECGGGCEEEEEEC
T ss_pred             HHHhhccccccceEEeeCC-eEEEEEECCCCCEEEEEEe
Confidence            9999999999999988875 6899999999999999875

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.62  E-value=2.1e-15  Score=127.59  Aligned_cols=130  Identities=18%  Similarity=0.168  Sum_probs=95.2

Q ss_pred             cccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCC------C------
Q 018138          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD------K------  177 (360)
Q Consensus       110 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~------~------  177 (360)
                      ..+++++||+|.|+|++++++||+++|||++..+...............+.....+.+.........      .      
T Consensus         9 ~~i~~~~Hi~i~V~D~e~a~~FY~~~LGf~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (172)
T d1sp8a1           9 FHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADAATAALPSFSAAA   88 (172)
T ss_dssp             SCEEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEETTEEEEEEEECCSSCCGGGCSSTTCCHHH
T ss_pred             CCcCEEEEEEEEeCCHHHHHHHHHHhhCceEEEEecccccceeEEEEEeccCCeeeEEeeccCCCchhhhcccccCCcch
Confidence            4678999999999999999999999999999876554433322233222222222222222111100      0      


Q ss_pred             -----CcCCCcceEEEEEECCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCC
Q 018138          178 -----YDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (360)
Q Consensus       178 -----~~~g~g~~hi~f~V~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~  240 (360)
                           ...+.|+.||||+|+|+++++++|+++|+++..+|....+|. ++++++.|.+..++|++...
T Consensus        89 ~~~~~~~~g~Gi~Hiaf~VdDi~aa~~~l~~~Ga~~~~~P~~~~~g~-~~a~v~~~g~~~~~lve~~~  155 (172)
T d1sp8a1          89 ARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRGF-RLAEVELYGDVVLRYVSYPD  155 (172)
T ss_dssp             HHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEETTE-EEEEEEEETTEEEEEEECCT
T ss_pred             hhhhhhhcCCceEEEEEeeCcHHHHHHHHHHCcCEeccCCccCCCCE-EEEEEECCCCcEEEEEecCC
Confidence                 013568999999999999999999999999999998877764 57889999999999999875

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=99.60  E-value=2.4e-15  Score=120.32  Aligned_cols=110  Identities=38%  Similarity=0.662  Sum_probs=82.1

Q ss_pred             CceeceeeecCHHHHHHHhhhcceEEeeeccCCC-----cc--EEEEEEe-------------CCcccccCCCCeeEEEE
Q 018138          244 PLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK-----NA--VLELTYN-------------HGVTEYDKGNGYAQIAI  303 (360)
Q Consensus       244 ~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~-----~~--~l~l~~~-------------~~~~~~~~g~g~~hiaf  303 (360)
                      ++.|+.|.|+|+++|.+||++    +||++....     ..  ...+...             ......+.+.+..|+++
T Consensus         2 kl~Hv~i~V~Dl~~s~~FY~~----iLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (135)
T d1f9za_           2 RLLHTMLRVGDLQRSIDFYTK----VLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIAL   77 (135)
T ss_dssp             CEEEEEEECSCHHHHHHHHHH----TTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEE
T ss_pred             cceEEEEEcCCHHHHHHHHHH----HhCCEEEeeccccccceeeeeeccceeeeccccccccccccccccccccceeecc
Confidence            688999999999999999999    999975311     11  1111111             11111123357889999


Q ss_pred             EeCCHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCccccc
Q 018138          304 GTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFLK  357 (360)
Q Consensus       304 ~V~Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~  357 (360)
                      .+++++++.++++++|..+..+|...+.+..+++||+|||||.|||++..+--+
T Consensus        78 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~q~~~~~~  131 (135)
T d1f9za_          78 SVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDAGR  131 (135)
T ss_dssp             ECSCHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC-----
T ss_pred             chHHHHHHHHHHHHcCCCeecCCccccCCCeEEEEEECCCCCEEEEEECCCccc
Confidence            999999999999999999999998888776789999999999999999876544

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.51  E-value=1.3e-14  Score=119.07  Aligned_cols=108  Identities=17%  Similarity=0.135  Sum_probs=82.7

Q ss_pred             CCCceeceeeecCHHHHHHHhhhcceEEeeeccCCCc-cEEEEEEeCCcc------cccCCCCeeEEEEEeC---CHHHH
Q 018138          242 PEPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDKN-AVLELTYNHGVT------EYDKGNGYAQIAIGTD---DVYKT  311 (360)
Q Consensus       242 ~~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~~-~~l~l~~~~~~~------~~~~g~g~~hiaf~V~---Dl~~~  311 (360)
                      ..+++||.|.|+|++++++||++    +||+...+.. ....+.......      .....++++|++|.+.   |++++
T Consensus        14 i~rl~hv~l~v~Dl~~s~~FY~~----~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~dl~~~   89 (146)
T d1f1ua1          14 IVRCAYMEIVVTDLAKSREFYVD----VLGLHVTEEDENTIYLRSLEEFIHHNLVLRQGPIAAVAAFAYRVKSPAEVDAA   89 (146)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHTT----TTCCEEEEECSSEEEEECTTCCSSCSEEEEECSSCEEEEEEEEESSHHHHHHH
T ss_pred             CcEEeEEEEEeCCHHHHHHHHHh----ccCcEEEeecCCceeeecccccccceeeccccCCCCCceeeEeeccchhHHHH
Confidence            45799999999999999999999    9999864321 122222211111      0123468899999995   68899


Q ss_pred             HHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCc
Q 018138          312 AEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  353 (360)
Q Consensus       312 ~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  353 (360)
                      +++|+++|+++...+.....+.++.+||+|||||.|||+...
T Consensus        90 ~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~  131 (146)
T d1f1ua1          90 EAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYET  131 (146)
T ss_dssp             HHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCB
T ss_pred             HHHHHHcCCceeeccccccCCceEEEEEECCCCcEEEEEEec
Confidence            999999999999888877766578899999999999998753

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=99.50  E-value=6.3e-14  Score=114.47  Aligned_cols=104  Identities=17%  Similarity=0.279  Sum_probs=76.2

Q ss_pred             CCceeceeeecCHHHHHHHhhhcceEEeeeccC-----------------------------CCccEEEEEEe---CCcc
Q 018138          243 EPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPE-----------------------------DKNAVLELTYN---HGVT  290 (360)
Q Consensus       243 ~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~-----------------------------~~~~~l~l~~~---~~~~  290 (360)
                      .+++|+.|.|+|++++.+||++     ||++..                             +....+++...   ....
T Consensus         8 ~ri~Hv~i~v~Dle~s~~FY~~-----LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~   82 (149)
T d1ss4a_           8 LRMDNVSIVVESLDNAISFFEE-----IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFLTPPTIA   82 (149)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHH-----HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEEEESCCCC
T ss_pred             CEEeEEEEEeCCHHHHHHHHHH-----cCCcEeeeeccceeeeeeeeccCCCceeEEEEeecccceEEEEEeeccccCcc
Confidence            4789999999999999999996     233210                             01112222211   1111


Q ss_pred             cc----cCCCCeeEEEEEeCCHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcC
Q 018138          291 EY----DKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  352 (360)
Q Consensus       291 ~~----~~g~g~~hiaf~V~Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  352 (360)
                      ..    ....|++|++|.|+|+++++++|+++|+++..+|...+++ .+.+|++||||+.|||+|.
T Consensus        83 ~~~~~~~~~~g~~hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~~DPdG~~iEl~e~  147 (149)
T d1ss4a_          83 DHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENS-YRLCYIRGVEGILIGLAEE  147 (149)
T ss_dssp             BCTTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETTT-EEEEEEECGGGCEEEEEEE
T ss_pred             cccccCCCCcceeEEEEeechhHHHHHHHHHCCCeEccCCeECCCC-eEEEEEECCCCCEEEEEEc
Confidence            11    1124789999999999999999999999999888766654 6889999999999999985

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

Probab=99.50  E-value=3.5e-14  Score=115.10  Aligned_cols=107  Identities=20%  Similarity=0.294  Sum_probs=75.3

Q ss_pred             CCceeceeee----cCHHHHHHHhhhcceEEeeeccCCC-----c------------cEEEEEEeCCcccccCCCCeeEE
Q 018138          243 EPLCQVMLRV----GDLDRAINFYKKYTIAVMGYGPEDK-----N------------AVLELTYNHGVTEYDKGNGYAQI  301 (360)
Q Consensus       243 ~~i~hv~L~V----~D~e~a~~FY~~~~~~~lG~~~~~~-----~------------~~l~l~~~~~~~~~~~g~g~~hi  301 (360)
                      ..+.|+.++|    .|++++.+||++    +||++....     .            ..+.+....+......+.+.+|+
T Consensus         4 ~~~~~~~~RVa~pv~Dle~s~~FY~~----vLG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~hl   79 (137)
T d1twua_           4 SSFQAAQIRIARPTGQLDEIIRFYEE----GLCLKRIGEFSQHNGYDGVMFGLPHADYHLEFTQYEGGSTAPVPHPDSLL   79 (137)
T ss_dssp             SSCBCSCEEEEEECSCHHHHHHHHTT----TSCCCEEEEEEEETTEEEEEEESSSSSEEEEEEEETTCCCCCCCCTTCEE
T ss_pred             CCCceEEEEEecccCCHHHHHHHHHh----ccCCceeeeeccccceeEEEecCCCCceeeecccccccccccccccCceE
Confidence            3566777665    699999999999    999874210     1            11122222222222234467899


Q ss_pred             EEEeCC---HHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCccc
Q 018138          302 AIGTDD---VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDF  355 (360)
Q Consensus       302 af~V~D---l~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  355 (360)
                      +|.|+|   +++++++|+++|+++..++.+..+  .+.+||+||||++|||++.+..
T Consensus        80 af~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~--~~~~~f~DPDG~~Iel~~~~~~  134 (137)
T d1twua_          80 VFYVPNAVELAAITSKLKHMGYQEVESENPYWS--NGGVTIEDPDGWRIVFMNSKGI  134 (137)
T ss_dssp             EEECCCHHHHHHHHHHHHHTTCCEECCSSHHHH--SSEEEEECTTCCEEEEESSCCC
T ss_pred             EEEeCCHHHHHHHHHHHHHCCCeEeCCCCCCCC--ceEEEEECCCCCEEEEEcCCCC
Confidence            999876   778999999999999876654333  5679999999999999987653

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.49  E-value=1.3e-13  Score=112.43  Aligned_cols=106  Identities=16%  Similarity=0.169  Sum_probs=75.6

Q ss_pred             CCCceeceeeecCHHHHHHHhhhcceEEeeeccCC------CccEEEEEEe---------------CCcccccCC-CCee
Q 018138          242 PEPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPED------KNAVLELTYN---------------HGVTEYDKG-NGYA  299 (360)
Q Consensus       242 ~~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~------~~~~l~l~~~---------------~~~~~~~~g-~g~~  299 (360)
                      ..+|+||+|.|+|++++++||++    +||++...      ......+...               ........+ .+++
T Consensus         4 i~gl~Hv~l~v~Dl~~s~~FY~~----vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~   79 (144)
T d1zswa1           4 IKGHHHISMVTKNANENNHFYKN----VLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRTYRGTNAIT   79 (144)
T ss_dssp             CCSEEEEEEEESCHHHHHHHHHT----TTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEE
T ss_pred             ccceeeEEEEeCCHHHHHHHHHH----HhCCeeEeeeccccCCceeEEEecccccceeeEEeecccccccCCccCCCcee
Confidence            46899999999999999999999    99987421      1111111111               001011122 3589


Q ss_pred             EEEEEeCC---HHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCcc
Q 018138          300 QIAIGTDD---VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  354 (360)
Q Consensus       300 hiaf~V~D---l~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  354 (360)
                      |++|.|+|   ++++.+++++.|+++. ++..+.+  .+.+||+|||||.|||++..+
T Consensus        80 Hiaf~v~~~~~l~~~~~~l~~~gv~~~-~~~~~~~--~~~~yf~DPdG~~iEl~~~~~  134 (144)
T d1zswa1          80 RIGLLVPSEDSLHYWKERFEKFDVKHS-EMTTYAN--RPALQFEDAEGLRLVLLVSNG  134 (144)
T ss_dssp             EEEEEESCHHHHHHHHHHHHHTTCEEC-CSEEETT--EEEEEEECTTCCEEEEEECTT
T ss_pred             EEEEecCCchhHHHHhhhhhccceeee-CccccCC--eEEEEEECCCCCEEEEEEeCC
Confidence            99999988   6788999999999874 4444544  688999999999999988753

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.49  E-value=7.1e-14  Score=116.73  Aligned_cols=108  Identities=13%  Similarity=0.173  Sum_probs=80.8

Q ss_pred             CCceeceeeecCHHHHHHHhhhcceEEeeeccCC-----CccE--EEEEEeCCcc-----cccCCCCeeEEEEEeCCHH-
Q 018138          243 EPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPED-----KNAV--LELTYNHGVT-----EYDKGNGYAQIAIGTDDVY-  309 (360)
Q Consensus       243 ~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~-----~~~~--l~l~~~~~~~-----~~~~g~g~~hiaf~V~Dl~-  309 (360)
                      .+++||.|.|+|++++++||++    +||++..+     ....  ..+.......     ..+..++..|++|.+.+++ 
T Consensus         4 ~rldHv~l~v~Dle~s~~FY~~----vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~   79 (162)
T d1mpya2           4 VRFDHALMYGDELPATYDLFTK----VLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAFIHHPEKGRLHHVSFHLETWED   79 (162)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHH----TTCCEEEEEEECTTCCEEEEEEESSSBSCSEEEEECSSSSEEEEEEEECSCHHH
T ss_pred             ccccEEEEECCCHHHHHHHHHH----ccCCEEEEEEccccccceeeeeecccccccccccccCCCCccceeEEEEeeehh
Confidence            4789999999999999999999    99996422     1111  1111111111     1123457899999997655 


Q ss_pred             --HHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCcc
Q 018138          310 --KTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  354 (360)
Q Consensus       310 --~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  354 (360)
                        +++++|++.|+++..+|.++..+..+.+||+|||||.|||+...+
T Consensus        80 ~~~~~~~L~~~gv~~~~~p~~~~~g~~~~~y~~DPdGn~iEl~~~~~  126 (162)
T d1mpya2          80 LLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGGD  126 (162)
T ss_dssp             HHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECCC
T ss_pred             hhhHHHHHHHcCCccccCccccCCCCeEEEEEECCCCCEEEEEECCc
Confidence              788999999999999998887766789999999999999987643

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=99.49  E-value=3.7e-14  Score=115.12  Aligned_cols=108  Identities=13%  Similarity=0.129  Sum_probs=77.5

Q ss_pred             CCCceeceeeecCHHHHHHHhhhcceEEeeeccCC----------------------CccEEEEEEeCCccc--------
Q 018138          242 PEPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPED----------------------KNAVLELTYNHGVTE--------  291 (360)
Q Consensus       242 ~~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~----------------------~~~~l~l~~~~~~~~--------  291 (360)
                      ..+|+||.|.|+|+++|.+||++    +||+....                      ....+++........        
T Consensus         5 ~~~i~Hi~i~v~Dl~~a~~fY~~----~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~   80 (145)
T d1jc4a_           5 FICIDHVAYACPDADEASKYYQE----TFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAK   80 (145)
T ss_dssp             CSEEEEEEEECSCHHHHHHHHHH----HHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHH
T ss_pred             ceEEeEEEEEeCCHHHHHHHHHh----hccCceeeeeeecccceEEEeeeceeccccccchhhhhhhhcccCcccccccc
Confidence            35799999999999999999999    89886311                      112333332211110        


Q ss_pred             ccCCCCeeEEEEEeCCHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEE--ECCCCCeEEEEcCc
Q 018138          292 YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITAC--LDPDGWKSVFVDNL  353 (360)
Q Consensus       292 ~~~g~g~~hiaf~V~Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~--~DPdG~~iel~~~~  353 (360)
                      .....|++|+||.|+|+++++++|+++|+++..++.....++.+++|+  +||+|+.|||+|..
T Consensus        81 ~~~~~g~~Hia~~v~di~~~~~~l~~~Gv~~~~~~~~~~~~g~~~~f~~p~dp~G~~iEl~e~p  144 (145)
T d1jc4a_          81 HNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQYP  144 (145)
T ss_dssp             TTTCCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEECC
T ss_pred             cCCCCcceEEEEecchHHHHHHHHHHCCCEEeCCCceECCCCCEEEEEeccCCCCeEEEEEECC
Confidence            122458999999999999999999999999876543333322355555  79999999999964

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.48  E-value=1.6e-14  Score=112.03  Aligned_cols=99  Identities=16%  Similarity=0.110  Sum_probs=75.7

Q ss_pred             eceeeecCHHHHHHHhhhcceEEeeeccCCC-ccEEEEEEeCCc-------ccccCCCCeeEEEEEeCCHHHHHHHHHHc
Q 018138          247 QVMLRVGDLDRAINFYKKYTIAVMGYGPEDK-NAVLELTYNHGV-------TEYDKGNGYAQIAIGTDDVYKTAEAIKLS  318 (360)
Q Consensus       247 hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~-~~~l~l~~~~~~-------~~~~~g~g~~hiaf~V~Dl~~~~~~l~~~  318 (360)
                      +..|.|+|+++|++||++    +|||+.... +....+......       .....+.+..|++|.|+|+++++++++++
T Consensus         5 ~~~l~v~d~~~a~~FY~~----~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvd~~~~~l~~~   80 (111)
T d2pjsa1           5 VANIATPEPARAQAFYGD----ILGMPVAMDHGWIVTHASPLEAHAQVSFAREGGSGTDVPDLSIEVDNFDEVHARILKA   80 (111)
T ss_dssp             EEEEECSCGGGGHHHHTT----TTCCCEEEECSSEEEEEEEEEEEEEEEEESSSBTTBCCCSEEEEESCHHHHHHHHHHT
T ss_pred             EEEEEeCCHHHHHHHHHH----hhCCceeecccceeEeccccccceeeecccccCCCCceeEEEEEecCHHHHHHHHHhh
Confidence            467999999999999999    999975422 222222111100       01122345678999999999999999999


Q ss_pred             CCeEeeCCcccCCCCcEEEEEECCCCCeEEEE
Q 018138          319 GGKITREPGPLPGINTKITACLDPDGWKSVFV  350 (360)
Q Consensus       319 G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~  350 (360)
                      |+++..+|...+++ .+.+|++|||||.||++
T Consensus        81 g~~~~~~p~~~~~g-~~~~~~~DP~Gn~iei~  111 (111)
T d2pjsa1          81 GLPIEYGPVTEAWG-VQRLFLRDPFGKLINIL  111 (111)
T ss_dssp             TCCCSEEEEECTTS-CEEEEEECTTSCEEEEE
T ss_pred             ccccccCCeEcCCC-cEEEEEECCCCCEEEeC
Confidence            99999999888875 68999999999999985

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.48  E-value=7.4e-14  Score=117.70  Aligned_cols=104  Identities=17%  Similarity=0.103  Sum_probs=74.6

Q ss_pred             CCCceeceeeecCHHHHHHHhhhcceEEeeeccCCCcc-EEEEEE-------------eCCcccccCCCCeeEEEEEeCC
Q 018138          242 PEPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDKNA-VLELTY-------------NHGVTEYDKGNGYAQIAIGTDD  307 (360)
Q Consensus       242 ~~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~~~-~l~l~~-------------~~~~~~~~~g~g~~hiaf~V~D  307 (360)
                      ..+++||.|.|+|++++.+||++    +|||+...... ...+..             .......+...+++|++|.|+|
T Consensus        10 I~Gl~HV~L~V~Dle~s~~FY~~----vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HiAf~V~~   85 (170)
T d1zswa2          10 IQGMGSVELTVRRLDKMASTLTE----IFGYTEVSRNDQEAIFQSIKGEAFGEIVVKYLDGPTEKPGRGSIHHLAIRVKN   85 (170)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHH----TTCCEEEEECSSEEEEESSTTCSTTCEEEEECCSSBCBCCBTCEEEEEEEESS
T ss_pred             hCCeeeEEEEeCCHHHHHHHHHH----HhCCEEEeecCceEEEEeccCccceEEEeccccccccccCccccceEEEEeCC
Confidence            36799999999999999999999    99987532211 111111             0111111122368999999975


Q ss_pred             ---HHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcC
Q 018138          308 ---VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  352 (360)
Q Consensus       308 ---l~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  352 (360)
                         ++++.+++++.|+++. ++..+.+  .+.+||+|||||.|||+..
T Consensus        86 ~~~l~~~~~~l~~~G~~~~-~~~~~~~--~~s~Yf~DPdG~~iEl~t~  130 (170)
T d1zswa2          86 DAELAYWEEQVKQRGFHSS-GIIDRFY--FKSLYFRESNGILFEIATD  130 (170)
T ss_dssp             HHHHHHHHHHHHHTTCCCC-CCEECSS--EEEEEEECTTCCEEEEEEE
T ss_pred             hHHHHHHHHHHHhcCCCcc-ccccCCC--EEEEEEECCCCcEEEEEEC
Confidence               7789999999999974 4444444  6789999999999999874

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=1.6e-13  Score=115.66  Aligned_cols=105  Identities=27%  Similarity=0.409  Sum_probs=77.4

Q ss_pred             CceeceeeecCHHHHHHHhhhcceEEeeeccC------CCccEEEEEE-----------------------------eCC
Q 018138          244 PLCQVMLRVGDLDRAINFYKKYTIAVMGYGPE------DKNAVLELTY-----------------------------NHG  288 (360)
Q Consensus       244 ~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~------~~~~~l~l~~-----------------------------~~~  288 (360)
                      +++|+.|.|+|+++|++||++    +||++..      ..........                             ...
T Consensus        23 ~l~Hi~l~V~Dl~~si~FY~~----vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (176)
T d1qipa_          23 LLQQTMLRVKDPKKSLDFYTR----VLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWG   98 (176)
T ss_dssp             EEEEEEEECSCHHHHHHHHHH----TTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETT
T ss_pred             EEeEEEEEeCCHHHHHHHHHH----hhCCeEeeeecccCCceEEEEeecCCccccccccccccccccccccceeEEEeec
Confidence            689999999999999999999    9998631      1111111100                             000


Q ss_pred             cc-----cc----cCCCCeeEEEEEeCCHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCcc
Q 018138          289 VT-----EY----DKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  354 (360)
Q Consensus       289 ~~-----~~----~~g~g~~hiaf~V~Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  354 (360)
                      ..     ..    ....++.|++|.|+|+++++++|+++|+++..+|...++  .+++||+|||||.|||+|+.-
T Consensus        99 ~~~~~~~~~~~~~~~~~g~~h~~~~~~d~~~~~~~l~~~Gv~~~~~p~~g~~--~~~~f~~DPdG~~IElvq~~~  171 (176)
T d1qipa_          99 TEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKM--KGLAFIQDPDGYWIEILNPNK  171 (176)
T ss_dssp             GGGCTTCCCBCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCEEEECTTSSSS--TTCEEEECTTCCEEEEECTTT
T ss_pred             cccccCcCccCCCCCccceeEEEeeHHHHHHHHHHHHHCCCEEeeCCccCCc--eEEEEEECCCCCEEEEEeCCC
Confidence            00     00    012478999999999999999999999999998875444  567899999999999999753

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=99.46  E-value=2e-13  Score=108.96  Aligned_cols=103  Identities=21%  Similarity=0.212  Sum_probs=74.4

Q ss_pred             CceeceeeecCHHHHHHHhhhcceEEeeeccCCC---ccEEEEEEeCC----------ccc------ccCCCCeeEEEEE
Q 018138          244 PLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK---NAVLELTYNHG----------VTE------YDKGNGYAQIAIG  304 (360)
Q Consensus       244 ~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~---~~~l~l~~~~~----------~~~------~~~g~g~~hiaf~  304 (360)
                      +|.|+.|.|+|++++++||++     ||+.....   .....+....+          ...      .+.+.+..|++|.
T Consensus         2 ri~hv~l~V~D~~~s~~FY~~-----Lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   76 (128)
T d1klla_           2 RISLFAVVVEDMAKSMEFYRK-----MGVEIPAEADSAPHTEAVLDGGIRLAWDTVETVRSYDPEWQAPTGGHRFAIAFE   76 (128)
T ss_dssp             CCCEEEEEESCHHHHHHHHHH-----TTCCCCTTGGGCSEEEEECGGGCEEEEEEHHHHHHHCTTCCCCCSSCSCEEEEE
T ss_pred             eEeEEEEEcCCHHHHHHHHHH-----hCCccccccccccceeeeccceeeeeecccccccccCCCCCCCccccceeEeee
Confidence            689999999999999999975     45543221   11111111000          000      1112345799999


Q ss_pred             eCC---HHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcC
Q 018138          305 TDD---VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  352 (360)
Q Consensus       305 V~D---l~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  352 (360)
                      |++   +++++++++++|+++..+|...+++ .+.+||+|||||.|||+++
T Consensus        77 v~~~~~l~~~~~~l~~~G~~~~~~p~~~~~G-~~~~~~~DPdG~~iel~~p  126 (128)
T d1klla_          77 FPDTASVDKKYAELVDAGYEGHLKPWNAVWG-QRYAIVKDPDGNVVDLFAP  126 (128)
T ss_dssp             CSSHHHHHHHHHHHHHTTCEEEEEEEECTTS-EEEEEEECTTSCEEEEEEE
T ss_pred             eccchhhHHHHHHHHhccCccccCCeEcCCC-cEEEEEECCCCCEEEEEec
Confidence            976   7789999999999999999888875 6899999999999999864

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.44  E-value=4.9e-14  Score=115.07  Aligned_cols=109  Identities=14%  Similarity=0.150  Sum_probs=78.1

Q ss_pred             CCceeceeeecCHHHHHHHhhhcceEEeeeccCCCc-cEEEEEEeCCcc-----c--ccCCCCeeEEEEEe---CCHHHH
Q 018138          243 EPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDKN-AVLELTYNHGVT-----E--YDKGNGYAQIAIGT---DDVYKT  311 (360)
Q Consensus       243 ~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~~-~~l~l~~~~~~~-----~--~~~g~g~~hiaf~V---~Dl~~~  311 (360)
                      .+|+||.|.|+|++++.+||++    +||+...... ............     .  .....+..|+++.+   +|++++
T Consensus         6 ~rl~Hv~l~v~D~~~s~~FY~~----vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~   81 (145)
T d1mpya1           6 MRPGHVQLRVLDMSKALEHYVE----LLGLIEMDRDDQGRVYLKAWTEVDKFSLVLREADEPGMDFMGFKVVDEDALRQL   81 (145)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHH----TTCCEEEEECTTSCEEEECTTCCBSCSEEEEECSSCEEEEEEEEESCHHHHHHH
T ss_pred             cEeeeEEEEeCCHHHHHHHHHH----hhCCEEEEeeccCccceecccccceeeccccccCcccceeeeeeehhHHHHHHH
Confidence            4689999999999999999999    9998753211 011111111110     0  11224566766665   578999


Q ss_pred             HHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCccc
Q 018138          312 AEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDF  355 (360)
Q Consensus       312 ~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  355 (360)
                      +++|+++|+++...|.....+.++.+||+|||||.|||+...+.
T Consensus        82 ~~~L~~~g~~~~~~~~~~~~g~~~~~~f~DPdG~~iEl~~~~e~  125 (145)
T d1mpya1          82 ERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYADKEY  125 (145)
T ss_dssp             HHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBCB
T ss_pred             HHHHHHCCCcEEECCCcccCCceEEEEEECCCCCEEEEEEeccc
Confidence            99999999999888776655546899999999999999986554

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.44  E-value=6.2e-13  Score=104.82  Aligned_cols=105  Identities=25%  Similarity=0.346  Sum_probs=76.1

Q ss_pred             EEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEECCHHHHHH
Q 018138          120 YRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVD  199 (360)
Q Consensus       120 l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~Dld~~~~  199 (360)
                      |.|+|++++++||++ |||++.....    .  .+++..+.    ..+.+.......   ......++++.++|++++++
T Consensus         8 l~v~Dl~~s~~FY~~-LGf~~~~~~~----~--~~~~~~~~----~~~~~~~~~~~~---~~~~~~~~~~~~~d~~~~~~   73 (120)
T d1ecsa_           8 LPSRDFDSTAAFYER-LGFGIVFRDA----G--WMILQRGD----LMLEFFAHPGLD---PLASWFSCCLRLDDLAEFYR   73 (120)
T ss_dssp             EEESCHHHHHHHHHT-TTCEEEEECS----S--EEEEEETT----EEEEEEECTTCC---GGGCCCEEEEEESCHHHHHH
T ss_pred             EEeCCHHHHHHHHHH-cCCeeEEecC----c--eeeeecce----eccccccccccc---cCCCCcEEEEEECCHHHHHH
Confidence            999999999999987 9999986532    1  24444332    234444332221   11234579999999999999


Q ss_pred             HHHHcCCeEec-------CCeecCCCCEEEEEEECCCCCEEEEeecC
Q 018138          200 LVKAKGGKVTR-------EPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (360)
Q Consensus       200 rL~~~G~~~~~-------~p~~~~~g~~~~~~~~DPdG~~iEl~~~~  239 (360)
                      .++++|+++..       +|...++|.+ .+||+|||||.|||+|.+
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~G~r-~~~~~DPDGn~iei~q~d  119 (120)
T d1ecsa_          74 QCKSVGIQETSSGYPRIHAPELQGWGGT-MAALVDPDGTLLRLIQNE  119 (120)
T ss_dssp             HHHHTTCCBCSSSSSEEEEEEECTTSSE-EEEEECTTSCEEEEEECC
T ss_pred             HHhhhhhhhccccccccccceecCCCcE-EEEEECCCCCEEEEEEcc
Confidence            99999888643       4566677776 589999999999999864

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.43  E-value=1.8e-13  Score=113.63  Aligned_cols=108  Identities=15%  Similarity=0.107  Sum_probs=78.6

Q ss_pred             CCCceeceeeecCHHHHHHHhhhcceEEeeeccCCC---------ccEE-EEEEeCCccc-----ccCCCCeeEEEEEeC
Q 018138          242 PEPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK---------NAVL-ELTYNHGVTE-----YDKGNGYAQIAIGTD  306 (360)
Q Consensus       242 ~~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~---------~~~l-~l~~~~~~~~-----~~~g~g~~hiaf~V~  306 (360)
                      +.+|+||.|.|+|++++.+||++    +||++..+.         .... .+..+.....     .+..++++|++|+|+
T Consensus         8 ~~GlgHv~l~v~D~e~t~~FY~~----vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~a~~~~~~~~gl~Hiaf~v~   83 (156)
T d1kw3b2           8 DQGIGHFVRCVPDTAKAMAFYTE----VLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHTIALAAFPIPKRIHHFMLQAN   83 (156)
T ss_dssp             GGCSCEEEEECSCHHHHHHHHHH----TTCCEEEEEEEEEEETTEEEEEEEEESSSBSCSEEEECCSCSSSEEEEEEEBS
T ss_pred             CCCcceEEEecCCHHHHHHHHHH----hcCceeeeEEeeccCCCCcceeEEEeeccccceeeeccCCCCCceeEEEEECC
Confidence            35899999999999999999999    999986432         1111 1111111111     122358999999996


Q ss_pred             C---HHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCC-eEEEEcCcc
Q 018138          307 D---VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGW-KSVFVDNLD  354 (360)
Q Consensus       307 D---l~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~-~iel~~~~~  354 (360)
                      +   +.+++++|+++|+.+ .+|.+|..+...++|++||||+ .+|+.-...
T Consensus        84 ~~ddv~~~~d~l~~~G~~~-~g~~rH~~~~~~s~Y~~DP~G~~~~E~~~~~~  134 (156)
T d1kw3b2          84 TIDDVGYAFDRLDAAGRIT-SLLGRHTNDQTLSFYADTPSPMIEVEFGWGPR  134 (156)
T ss_dssp             SHHHHHHHHHHHHHTTCBC-BCSEEESSSCCEEEEEECSSTTCEEEEEECCC
T ss_pred             CHHHHHHHHHHHHhcCCce-ecCcccCCCCeEEEEEECCCCCeEEEEecCCc
Confidence            5   556889999999865 6788888766789999999998 589966543

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=99.42  E-value=2.6e-13  Score=105.54  Aligned_cols=100  Identities=13%  Similarity=0.098  Sum_probs=71.1

Q ss_pred             CCceeceeeecCHHHHHHHhhhcceEEeeeccCCC-ccEEEEEEeCCcc-------cccCCCCeeEEEEEeCC---HHHH
Q 018138          243 EPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK-NAVLELTYNHGVT-------EYDKGNGYAQIAIGTDD---VYKT  311 (360)
Q Consensus       243 ~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~-~~~l~l~~~~~~~-------~~~~g~g~~hiaf~V~D---l~~~  311 (360)
                      .+|+||.|.|+|++++++||++    +|||+.... .....+....+..       .....++..|++|.|+|   ++++
T Consensus         2 m~i~Hi~l~v~Dl~~a~~FY~~----~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~f~v~~~~~v~~~   77 (113)
T d1xqaa_           2 MGIKHLNLTVADVVAAREFLEK----YFGLTCSGTRGNAFAVMRDNDGFILTLMKGKEVQYPKTFHVGFPQESEEQVDKI   77 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHH----HHCCEEEEEETTTEEEEECTTCCEEEEEECSSCCCCTTCCEEEECSSHHHHHHH
T ss_pred             CcccEEEEEeCCHHHHHHHHHH----hhCCEEEEeecCcceeeeecceeeeeeeeeecccccccceeeeeeccccchhhh
Confidence            3689999999999999999999    999975321 1111111111110       01223467899999976   6789


Q ss_pred             HHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEE
Q 018138          312 AEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFV  350 (360)
Q Consensus       312 ~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~  350 (360)
                      +++++++|+++..+|  ...  ++.+||+|||||.|||+
T Consensus        78 ~~~l~~~G~~~~~~~--~~~--~~~~~~~DPdG~~iEi~  112 (113)
T d1xqaa_          78 NQRLKEDGFLVEPPK--HAH--AYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             HHHHHHTTCCCCCCE--EC---CEEEEEEETTTEEEEEE
T ss_pred             hhhHHHcCCccccCC--CCc--eEEEEEECCCCCEEEEE
Confidence            999999999976544  333  57899999999999985

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=99.41  E-value=1e-13  Score=111.57  Aligned_cols=106  Identities=14%  Similarity=0.089  Sum_probs=78.4

Q ss_pred             CCceeceeeecCHHHHHHHhhhcceEEeeeccCCC-ccEEEEEEeCCcc--cc--cCCCCeeEEEEEeC---CHHHHHHH
Q 018138          243 EPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK-NAVLELTYNHGVT--EY--DKGNGYAQIAIGTD---DVYKTAEA  314 (360)
Q Consensus       243 ~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~-~~~l~l~~~~~~~--~~--~~g~g~~hiaf~V~---Dl~~~~~~  314 (360)
                      ..|+||.|.|+|++++++||++    +||++.... ...+.+.......  ..  ...+++.|++|.|.   |++++.++
T Consensus         3 ~~l~hv~i~V~Dl~~s~~FY~~----vLG~~~~~~~~~~~~l~~~~~~~~l~l~~~~~~~~~h~~f~v~~~~dl~~~~~~   78 (131)
T d1lgta1           3 RSLGYMGFAVSDVAAWRSFLTQ----KLGLMEAGTTDNGDLFRIDSRAWRIAVQQGEVDDLAFAGYEVADAAGLAQMADK   78 (131)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHH----TTCCEEEEEETTEEEEESSSBSCSEEEEECTTCEEEEEEEEESSHHHHHHHHHH
T ss_pred             ccccEEEEEeCCHHHHHHHHHH----hhCCceeecCCcceEEeecCCceEEEEecCCCCCceEEEEEEccHHHHHHHHHH
Confidence            4689999999999999999999    999975332 2233343221111  11  22458899999995   57889999


Q ss_pred             HHHcCCeEeeCCcccC--CCCcEEEEEECCCCCeEEEEcC
Q 018138          315 IKLSGGKITREPGPLP--GINTKITACLDPDGWKSVFVDN  352 (360)
Q Consensus       315 l~~~G~~i~~~p~~~~--~~~~~~~~~~DPdG~~iel~~~  352 (360)
                      |+++|+++..+|....  .+..+.+||+|||||.||++..
T Consensus        79 l~~~g~~~~~~~~~~~~~~~~~~~~~f~DPdGn~iE~~~~  118 (131)
T d1lgta1          79 LKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYG  118 (131)
T ss_dssp             HHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEEC
T ss_pred             HHHcCCceEECCccccccCCceEEEEEECCCCCEEEEEeC
Confidence            9999999998886542  1225889999999999999743

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=99.41  E-value=1.2e-13  Score=110.48  Aligned_cols=105  Identities=16%  Similarity=0.083  Sum_probs=73.3

Q ss_pred             CceeceeeecCHHHHHHHhhhcceEEeeeccCCC--------ccEEEEEEeCCcc-----cccCCCCeeEEEEEe--CCH
Q 018138          244 PLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK--------NAVLELTYNHGVT-----EYDKGNGYAQIAIGT--DDV  308 (360)
Q Consensus       244 ~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~--------~~~l~l~~~~~~~-----~~~~g~g~~hiaf~V--~Dl  308 (360)
                      +|+|+.|.|+|++++.+||++    +|||+....        .....+.......     ......+..|++|.|  +|+
T Consensus         4 ~i~Hi~l~v~d~~~s~~FY~~----~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~v~~~dv   79 (130)
T d1r9ca_           4 GLSHMTFIVRDLERMTRILEG----VFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQGEKLAERSYNHIAFKIDDADF   79 (130)
T ss_dssp             EEEEEEEEESCHHHHHHHHHH----HHCCEEEEEGGGSTTCCSCEEEEEETTEEEEEEECCCCSSCCSCEEEEECCGGGH
T ss_pred             cEeEEEEEeCCHHHHHHHHHH----hcCCEEEEEcCCccccceeEEEEecCCEEEeecccccccccceeeeeecccHHHH
Confidence            689999999999999999999    999874210        1111111110000     112335678999977  479


Q ss_pred             HHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCc
Q 018138          309 YKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  353 (360)
Q Consensus       309 ~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  353 (360)
                      ++++++++++|+++..++....++ ++.+||+|||||+|||....
T Consensus        80 ~~~~~~l~~~gv~i~~~~~~~~~~-~~~~~~~DPdGn~iEl~~~~  123 (130)
T d1r9ca_          80 DRYAERVGKLGLDMRPPRPRVEGE-GRSIYFYDDDNHMFELHTGT  123 (130)
T ss_dssp             HHHHHHHHHHTCCBCCCCC------CCEEEEECTTSCEEEEECCC
T ss_pred             HHHHHHHHHCCCeEecCCcccCCC-EEEEEEECCCCCEEEEEECC
Confidence            999999999999988766544433 68899999999999997653

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

Probab=99.41  E-value=1.3e-12  Score=102.83  Aligned_cols=105  Identities=12%  Similarity=0.012  Sum_probs=75.0

Q ss_pred             EEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEECCHHHHH
Q 018138          119 VYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTV  198 (360)
Q Consensus       119 ~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~Dld~~~  198 (360)
                      +|.|+|++++++||+++|||++..+.+    .  .+++..+.    ..+.+.......    .....++.+.++|+++++
T Consensus        10 vL~v~Dl~~s~~FY~~vLG~~~~~~~~----~--~~~~~~~~----~~l~l~~~~~~~----~~~~~~~~~~~~~i~~~~   75 (122)
T d1jifa_          10 VLTAVDVPANVSFWVDTLGFEKDFGDR----D--FAGVRRGD----IRLHISRTEHQI----VADNTSAWIEVTDPDALH   75 (122)
T ss_dssp             EEEESSHHHHHHHHHHTTCCEEEEECS----S--EEEEEETT----EEEEEEECSCHH----HHTTCEEEEEESCHHHHH
T ss_pred             EEEcCCHHHHHHHHHhhhCCceEecCC----c--eeEeeeee----eeeeeecccccc----ccceeEEEEeechhHHHH
Confidence            499999999999999999999986532    2  35555543    345555433211    123468999999999999


Q ss_pred             HHHHHcCCeEecCC-------eecCCCCEEEEEEECCCCCEEEEeec
Q 018138          199 DLVKAKGGKVTREP-------GPVKGGNTVIAFIEDPDGYKFELLER  238 (360)
Q Consensus       199 ~rL~~~G~~~~~~p-------~~~~~g~~~~~~~~DPdG~~iEl~~~  238 (360)
                      +++++++......+       ....+++ +.+|++|||||+||+...
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~DPdGn~ief~~~  121 (122)
T d1jifa_          76 EEWARAVSTDYADTSGPAMTPVGESPAG-REFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             HHHHTTSCSCTTCTTSCEECCCEEETTE-EEEEEECTTCCEEEEEEC
T ss_pred             HHHHhhcceEEeeccccccCccccCCCe-EEEEEECCCCCEEEEEeC
Confidence            99999987654332       1223344 469999999999999764

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

Probab=99.39  E-value=4.5e-13  Score=106.97  Aligned_cols=106  Identities=28%  Similarity=0.490  Sum_probs=77.7

Q ss_pred             CCceeceeeecCHHHHHHHhhhcceEEeeeccCCC-----ccEEEEEEeCC---------------cccccCCCCeeEEE
Q 018138          243 EPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK-----NAVLELTYNHG---------------VTEYDKGNGYAQIA  302 (360)
Q Consensus       243 ~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~-----~~~l~l~~~~~---------------~~~~~~g~g~~hia  302 (360)
                      .++.||.|.|+|+++|++||++    +||+.....     .....+.....               ...........+++
T Consensus         2 ~r~~Hv~l~V~Dl~~s~~FY~~----~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (139)
T d2c21a1           2 RRMLHTMIRVGDLDRSIKFYTE----RLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIA   77 (139)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHH----TTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEE
T ss_pred             CceEEEEEEeCCHHHHHHHHHH----HhCCEeeccccccccceeeeeecccccccccccccccccCcccccCCCccceee
Confidence            4789999999999999999999    999875321     11122111100               00111234677899


Q ss_pred             EEeCCHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCccccc
Q 018138          303 IGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFLK  357 (360)
Q Consensus       303 f~V~Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~  357 (360)
                      +.++++.++++++...++++..+++     +.+++||+|||||+|||++..+..+
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~-----g~~~~~~~DPdGn~iEl~~~~~~~~  127 (139)
T d2c21a1          78 IGVEDVKELVADMRKHDVPIDYEDE-----SGFMAFVVDPDGYYIELLNEKTMME  127 (139)
T ss_dssp             EEESCHHHHHHHHHHTTCCEEEECS-----SSSEEEEECTTSCEEEEEEHHHHHH
T ss_pred             eehhhHHHHHHHHHHcCCceeeCCC-----CcEEEEEECCCCCEEEEEECCCCCC
Confidence            9999999999999999999876542     2578999999999999999876554

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.38  E-value=2e-13  Score=109.96  Aligned_cols=106  Identities=16%  Similarity=0.125  Sum_probs=78.9

Q ss_pred             CCceeceeeecCHHHHHHHhhhcceEEeeeccCCC-ccEEEEEEeCCc--ccc--cCCCCeeEEEEEeC---CHHHHHHH
Q 018138          243 EPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK-NAVLELTYNHGV--TEY--DKGNGYAQIAIGTD---DVYKTAEA  314 (360)
Q Consensus       243 ~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~-~~~l~l~~~~~~--~~~--~~g~g~~hiaf~V~---Dl~~~~~~  314 (360)
                      .+|+||.|.|+|++++.+||++    +|||+.... ...+.+......  ...  ....++.|++|.|.   |++++.++
T Consensus         3 ~~L~hv~i~v~Dl~~s~~FY~~----vLG~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~h~~f~v~~~~dl~~~~~~   78 (132)
T d1kw3b1           3 ERLGYLGFAVKDVPAWDHFLTK----SVGLMAAGSAGDAALYRADQRAWRIAVQPGELDDLAYAGLEVDDAAALERMADK   78 (132)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHH----TTCCEEEEEETTEEEEESSSBSCSEEEEECTTCEEEEEEEECSSHHHHHHHHHH
T ss_pred             ccccEEEEEeCCHHHHHHHHHH----HhCCceeccccceeeeeeeecceeeeeeccCCCCceEEEEEeccHHHHHHHHHH
Confidence            5789999999999999999999    999975432 223333322111  111  22357899999995   57889999


Q ss_pred             HHHcCCeEeeCCcccCC--CCcEEEEEECCCCCeEEEEcC
Q 018138          315 IKLSGGKITREPGPLPG--INTKITACLDPDGWKSVFVDN  352 (360)
Q Consensus       315 l~~~G~~i~~~p~~~~~--~~~~~~~~~DPdG~~iel~~~  352 (360)
                      ++++|+++.+++.....  +..+.+||+|||||.|||+-.
T Consensus        79 l~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdGn~iE~~~~  118 (132)
T d1kw3b1          79 LRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYG  118 (132)
T ss_dssp             HHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEEC
T ss_pred             HHHcCCCceecCccccccCCcceEEEEECCCCCEEEEEEC
Confidence            99999999998865432  125789999999999999754

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.38  E-value=1.1e-12  Score=105.75  Aligned_cols=116  Identities=11%  Similarity=0.058  Sum_probs=79.3

Q ss_pred             EEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCC-------CCeEEEEEeeCCCCceEEEEEEecC-C--CCCCcCCCcceE
Q 018138          117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE-------DRYTNAFLGYGPEDSHFVVELTYNY-G--VDKYDIGTGFGH  186 (360)
Q Consensus       117 HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~-------~~~~~~~l~~g~~~~~~~lel~~~~-~--~~~~~~g~g~~h  186 (360)
                      ++.+.|+|+++|++||+++||+++..+...++       .....+.|.+++.    .+.+.... .  ...........+
T Consensus        10 ~l~v~~~~~~eAi~FY~~~fG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~   85 (135)
T d1xy7a_          10 MLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGS----SFVVCDVSSLPGFSTAKSEGSGVT   85 (135)
T ss_dssp             EEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETTE----EEEEEEGGGSTTCCCCCTTSCCCE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCEEEEEEecCCccccccCCcEEEEEEEECCe----eeeccccccccccccCCCCCcceE
Confidence            45567789999999999999999876543222       1222345555432    23333211 1  111111223358


Q ss_pred             EEEEECCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEee
Q 018138          187 FGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (360)
Q Consensus       187 i~f~V~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~  237 (360)
                      +++.++|+++++.+++++|+++..+|...++|.+ .++|+||+|+.|+|.|
T Consensus        86 l~~~v~d~~~~~~~~~~~g~~~~~~~~~~~~g~~-~~~v~Dp~G~~W~i~e  135 (135)
T d1xy7a_          86 FLLGTKDAEAAVAKAVDAGAVKVEVTEAEVELGF-KGKVTDPFGVTWIFAE  135 (135)
T ss_dssp             EEEECSCHHHHHHHHHHTTCEECCCCHHHHHTTE-EEEEECTTSCEEEEEC
T ss_pred             EEEeecCcceeEEEeecccceEecCcccccccCE-EEEEECCCCCEEEEeC
Confidence            9999999999999999999999999999888876 5999999999999875

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.37  E-value=5.8e-13  Score=107.08  Aligned_cols=102  Identities=22%  Similarity=0.270  Sum_probs=71.6

Q ss_pred             CCceeceeeecCHHHHHHHhhhcceEEeeeccCCCc-cEEEEEEeC-------CcccccCCCCeeEEEEEe--CCHHHHH
Q 018138          243 EPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDKN-AVLELTYNH-------GVTEYDKGNGYAQIAIGT--DDVYKTA  312 (360)
Q Consensus       243 ~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~~-~~l~l~~~~-------~~~~~~~g~g~~hiaf~V--~Dl~~~~  312 (360)
                      .+|+||.|.|+|++++.+||++    +||++..... ....+....       .........+..|++|.+  +|+++++
T Consensus         3 ~~i~Hv~l~v~d~~~~~~FY~~----~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~dl~~~~   78 (134)
T d1nkia_           3 TGLNHLTLAVADLPASIAFYRD----LLGFRLEARWDQGAYLELGSLWLCLSREPQYGGPAADYTHYAFGIAAADFARFA   78 (134)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHH----TTCCEEEEEETTEEEEEETTEEEEEEECTTCCCCCSSSCEEEEEECHHHHHHHH
T ss_pred             CcEeEEEEEeCCHHHHHHHHHH----hhCCeEEEeccceeeeecCCeEEEEeeeccccccccccccchhccccchHHHHH
Confidence            3689999999999999999999    9998754321 111121110       000111233456666665  6899999


Q ss_pred             HHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcC
Q 018138          313 EAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  352 (360)
Q Consensus       313 ~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  352 (360)
                      ++|+++|+++...+  ++.  ++.+||+|||||.|||...
T Consensus        79 ~~l~~~G~~~~~~~--~~~--~~~~~f~DPdGn~iEl~~~  114 (134)
T d1nkia_          79 AQLRAHGVREWKQN--RSE--GDSFYFLDPDGHRLEAHVG  114 (134)
T ss_dssp             HHHHHTTCCEEECC--CSS--SCEEEEECTTCCEEEEESC
T ss_pred             HHHHHCCCcCccCC--Ccc--eeEEEEECCCCCEEEEEEC
Confidence            99999999986643  333  5779999999999999764

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=99.37  E-value=7.2e-13  Score=107.33  Aligned_cols=102  Identities=21%  Similarity=0.340  Sum_probs=74.0

Q ss_pred             CCceeceeeecCHHHHHHHhhhcceEEeeeccCCC-ccEEEE---------EEeCCccc-ccCCCCeeEEEEEe--CCHH
Q 018138          243 EPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK-NAVLEL---------TYNHGVTE-YDKGNGYAQIAIGT--DDVY  309 (360)
Q Consensus       243 ~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~-~~~l~l---------~~~~~~~~-~~~g~g~~hiaf~V--~Dl~  309 (360)
                      .+++||.|.|+|++++.+||++    +||++.... .....+         ........ .....+..|++|.+  +|++
T Consensus         3 ~~l~Hi~l~v~d~~~~~~FY~~----vLG~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~h~~~~~~~~d~~   78 (140)
T d1npba_           3 QSLNHLTLAVSDLQKSVTFWHE----LLGLTLHARWNTGAYLTCGDLWVCLSYDEARQYVPPQESDYTHYAFTVAEEDFE   78 (140)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHT----TSCCEEEEEETTEEEEEETTEEEEEEECTTCCCCCGGGSCSCEEEEECCHHHHH
T ss_pred             CcEeEEEEEeCCHHHHHHHHHH----HhCCEEEEEeccccccccccccceeecccccccCCCcCCccceeeeechHHHHH
Confidence            4689999999999999999999    999975321 111111         11111111 11234678889988  6899


Q ss_pred             HHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcC
Q 018138          310 KTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  352 (360)
Q Consensus       310 ~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  352 (360)
                      +++++|+++|+++...+.  .  .++.+||+|||||.|||...
T Consensus        79 ~~~~~l~~~Gv~~~~~~~--~--~~~~~~~~DPdGn~iEi~~~  117 (140)
T d1npba_          79 PLSQRLEQAGVTIWKQNK--S--EGASFYFLDPDGHKLELHVG  117 (140)
T ss_dssp             HHHHHHHHTTCCEEECCC--S--SSEEEEEECTTCCEEEEEEC
T ss_pred             HHHHHHHHCCCeEeecCC--C--CceEEEEECCCCCEEEEEEC
Confidence            999999999999876542  2  26889999999999999764

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.35  E-value=6.1e-13  Score=112.59  Aligned_cols=109  Identities=17%  Similarity=0.191  Sum_probs=78.4

Q ss_pred             CCCceeceeeecCHHHHHHHhhhcceEEeeeccCCC------ccEE-EEEEeCCccc----ccCCCCeeEEEEEeCC---
Q 018138          242 PEPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK------NAVL-ELTYNHGVTE----YDKGNGYAQIAIGTDD---  307 (360)
Q Consensus       242 ~~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~------~~~l-~l~~~~~~~~----~~~g~g~~hiaf~V~D---  307 (360)
                      ..+|+||.|.|+|++++++|| +    +|||+..+.      .... .+..+.....    ....++.+|++|.+.+   
T Consensus         3 i~rl~Hv~l~v~Dle~s~~FY-e----~LGf~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~H~~f~~~~~~~   77 (176)
T d1f1ua2           3 LVRLDHFNQVTPDVPRGRAYL-E----DLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGGNGPRMHHVAFATHEKHN   77 (176)
T ss_dssp             CCEEEEEEEEESCHHHHHHHH-H----HTTCEEEEEEECTTCCEEEEEEESSSSSCSEEEEESSBSEEEEEEEECSSHHH
T ss_pred             eeEeeeEEEEcCCHHHHHHHH-H----HCCCEEEEEEecCCcceeeeeeccCccccceecccccCCCccceeEEeccchh
Confidence            457999999999999999999 5    789875321      1111 1111111111    1234688999999975   


Q ss_pred             HHHHHHHHHHcCCe--EeeCCcccCCCCcEEEEEECCCCCeEEEEcCccc
Q 018138          308 VYKTAEAIKLSGGK--ITREPGPLPGINTKITACLDPDGWKSVFVDNLDF  355 (360)
Q Consensus       308 l~~~~~~l~~~G~~--i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  355 (360)
                      +.++.++|+++|+.  +..+|+++..+...++||+|||||.|||....+.
T Consensus        78 v~~~~~~l~~~g~~~~~~~~p~~h~~g~~~~~Y~~DPdG~~iEl~~~~~~  127 (176)
T d1f1ua2          78 IIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQDYY  127 (176)
T ss_dssp             HHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECCCC
T ss_pred             HHHHHHHHHHcCCceeeeecccccCCCCceEEEEECCCCCEEEEEeCCcc
Confidence            55677899999985  5577888887767899999999999999876543

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.35  E-value=8.3e-13  Score=110.10  Aligned_cols=109  Identities=19%  Similarity=0.226  Sum_probs=82.3

Q ss_pred             CCCceeceeeecCHHHHHHHhhhcceEEeeeccCC------------------CccEEEEEEeCCcc-c---------cc
Q 018138          242 PEPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPED------------------KNAVLELTYNHGVT-E---------YD  293 (360)
Q Consensus       242 ~~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~------------------~~~~l~l~~~~~~~-~---------~~  293 (360)
                      ..+++||.+.|+|+++|++||++    +|||+...                  ....+.+....... .         ..
T Consensus         5 i~~idHv~i~V~D~~~a~~fY~~----~lGf~~v~~~~~~~~~~~~~~~~l~~~~~~i~l~~~~~~~~~~~~~~~~~~~~   80 (163)
T d1t47a1           5 VKGMDAVVFAVGNAKQAAHYYST----AFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIKPATPWGHFLADHVAE   80 (163)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHH----TSCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSCCSHHHHHHHHHHHH
T ss_pred             CceEeEEEEEeCCHHHHHHHHHH----HhCCeEEeeecccccceeEEEEEEecCCEEEEEeccCCCCCccccccchhhhc
Confidence            35799999999999999999999    99986310                  01222232221111 0         12


Q ss_pred             CCCCeeEEEEEeCCHHHHHHHHHHcCCeEeeCCcccCCCC--cEEEEEECCCCCeEEEEcCcc
Q 018138          294 KGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGIN--TKITACLDPDGWKSVFVDNLD  354 (360)
Q Consensus       294 ~g~g~~hiaf~V~Dl~~~~~~l~~~G~~i~~~p~~~~~~~--~~~~~~~DPdG~~iel~~~~~  354 (360)
                      .+.|++|++|.|+|+++++++|+++|+++..+|....+..  -+++++++|+|..++|+++.+
T Consensus        81 ~g~G~~hiaf~VdDid~a~~~l~~~Ga~~~~~P~~~~d~~G~v~~a~I~~~g~~~~~lier~~  143 (163)
T d1t47a1          81 HGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRTG  143 (163)
T ss_dssp             HCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEEE
T ss_pred             CCCceEEEEEeeCCHHHHHHHHHHCCCeEEecCcceeCCCCEEEEEEEecCCCceEEEEeccC
Confidence            3679999999999999999999999999999987654433  367899999999999998644

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=6.5e-13  Score=108.97  Aligned_cols=110  Identities=23%  Similarity=0.309  Sum_probs=82.5

Q ss_pred             CCceeceeeecCHHHHHHHhhhcceEEeeeccC------CC------------ccEEEEEEeCCcc--c-----ccCCCC
Q 018138          243 EPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPE------DK------------NAVLELTYNHGVT--E-----YDKGNG  297 (360)
Q Consensus       243 ~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~------~~------------~~~l~l~~~~~~~--~-----~~~g~g  297 (360)
                      .+++||.|.|+|+++|.+||++    +|||+..      ..            ...+++.......  .     ...+.|
T Consensus        10 ~~~dHi~i~V~Dl~~a~~fY~~----~lGf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~G   85 (149)
T d1sqia1          10 LHFHSVTFWVGNAKQAASFYCN----KMGFEPLAYKGLETGSREVVSHVIKQGKIVFVLCSALNPWNKEMGDHLVKHGDG   85 (149)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHH----HHCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSTTCHHHHHHHHHHCSE
T ss_pred             eeEeEEEEEcCCHHHHHHHHhh----ccceEEEEEecccCCceEEEEEEecCCcEEEEEEeccCCCCchhhhhhhhCCCe
Confidence            3688999999999999999999    8998741      11            1122222211111  1     123679


Q ss_pred             eeEEEEEeCCHHHHHHHHHHcCCeEeeCCcccCCCCc--EEEEEECCCCCeEEEEcCcccc
Q 018138          298 YAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINT--KITACLDPDGWKSVFVDNLDFL  356 (360)
Q Consensus       298 ~~hiaf~V~Dl~~~~~~l~~~G~~i~~~p~~~~~~~~--~~~~~~DPdG~~iel~~~~~~~  356 (360)
                      ++|+||.|+|+++++++|+++|+++..+|.......+  ++++++.|+|..++|+|+.+..
T Consensus        86 ~~hiaf~V~di~~~~~~l~~~G~~~~~~P~~~~d~~G~v~~a~i~~~g~~~~~lier~~~~  146 (149)
T d1sqia1          86 VKDIAFEVEDCEHIVQKARERGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLVEKINYT  146 (149)
T ss_dssp             EEEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEESCC
T ss_pred             EEEEEEEeccHHHHHHHHHHCCCEEccCCeEEECCCCeEEEEEEECCCCCEEEEEEeCCCc
Confidence            9999999999999999999999999999876543323  5788999999999999987654

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

Probab=99.29  E-value=3e-11  Score=94.26  Aligned_cols=105  Identities=13%  Similarity=0.058  Sum_probs=73.4

Q ss_pred             EEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEECCHHH
Q 018138          117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAK  196 (360)
Q Consensus       117 HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~Dld~  196 (360)
                      +-.|.|+|++++++||+++|||++..+.+    .  ..++..+.    ..+.+......    ...+..++.+.+++++.
T Consensus         7 ~pvL~v~D~~~s~~FY~~~LG~~~~~~~~----~--~~~~~~~~----~~l~~~~~~~~----~~~~~~~~~~~~~~~~~   72 (120)
T d1xrka_           7 VPVLTARDVAEAVEFWTDRLGFSRVFVED----D--FAGVVRDD----VTLFISAVQDQ----VVPDNTQAWVWVRGLDE   72 (120)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCCEEEEECS----S--EEEEEETT----EEEEEEECSCT----TTGGGCEEEEEEECHHH
T ss_pred             EEEEEECCHHHHHHHHHHhhCCeEEEECC----C--eeEEeccc----ceeeccccccc----cCCCCceEEEeeccHHH
Confidence            34499999999999999999999986533    1  24555442    23444443221    12245678899999999


Q ss_pred             HHHHHHHcCCe--------EecCCeecCCCCEEEEEEECCCCCEEEEee
Q 018138          197 TVDLVKAKGGK--------VTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (360)
Q Consensus       197 ~~~rL~~~G~~--------~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~  237 (360)
                      ..+.+.+++.+        ...++...++| + .+||+|||||.||++.
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~-~~~~~DPdGn~ief~~  119 (120)
T d1xrka_          73 LYAEWSEVVSTNFRDASGPAMTEIVEQPWG-R-EFALRDPAGNCVHFVA  119 (120)
T ss_dssp             HHHHHTTTSBSCTTTCSSCEECCCEEETTE-E-EEEEECTTCCEEEEEE
T ss_pred             HHHHHHHhhhHHhhhcccccccCceecCCE-E-EEEEECCCCCEEEEEE
Confidence            88887766443        34456665554 3 6999999999999986

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.25  E-value=1.7e-11  Score=100.82  Aligned_cols=121  Identities=10%  Similarity=0.049  Sum_probs=87.5

Q ss_pred             cccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCC--C--CcCCCcce
Q 018138          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD--K--YDIGTGFG  185 (360)
Q Consensus       110 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~--~--~~~g~g~~  185 (360)
                      +.+.+|+||.+.|+|++++.+||++ |||+...+....  .  ...++-|  .  ..+.+.......  .  ..++.|++
T Consensus         5 ~g~~Gidhv~fav~d~~~~~~~~~~-lGF~~~~~~~~~--~--~~l~~~G--~--i~ll~~~~~~s~~~~~~~~hg~gv~   75 (150)
T d1cjxa1           5 MGLMGFEFIEFASPTPGTLEPIFEI-MGFTKVATHRSK--N--VHLYRQG--E--INLILNNEPNSIASYFAAEHGPSVC   75 (150)
T ss_dssp             TCEEEEEEEEEECSSTTSSHHHHHH-TTCEEEEEESSS--S--EEEEEET--T--EEEEEECCSSSHHHHHHHHHSSEEE
T ss_pred             CccCCEEEEEEecCCHHHHHHHHHH-hCCEEEecccce--E--EEEEecC--c--EEEEecCCCCCHhHhHHhhCCCceE
Confidence            3588999999999999999999986 999998764321  1  2333333  2  223332221110  0  13578999


Q ss_pred             EEEEEECCHHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecCCC
Q 018138          186 HFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  241 (360)
Q Consensus       186 hi~f~V~Dld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~~~  241 (360)
                      |++|+|+|+++++++++++|+++..+|..  .|...+..+++|+|.++.++++...
T Consensus        76 hiaf~V~D~~~a~~~a~~~Ga~~i~~~~~--~g~~~~~~i~g~gg~~i~Fv~~~~~  129 (150)
T d1cjxa1          76 GMAFRVKDSQKAYNRALELGAQPIHIDTG--PMELNLPAIKGIGGAPLYLIDRFGE  129 (150)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCCBCCCCCC--TTCBCCCEEECGGGCEEEEECCCSS
T ss_pred             EEEEEeCCHHHHHHHHHHCCCEEcccCCC--CCceeeeEEEcCCCCEEEEECcCCC
Confidence            99999999999999999999998776543  2333367889999999999997654

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.25  E-value=7.1e-12  Score=104.67  Aligned_cols=108  Identities=13%  Similarity=0.054  Sum_probs=81.9

Q ss_pred             CCceeceeeecCHHHHHHHhhhcceEEeeeccCC-------C-cc----------EEEEEEeCCcc--------------
Q 018138          243 EPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPED-------K-NA----------VLELTYNHGVT--------------  290 (360)
Q Consensus       243 ~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~-------~-~~----------~l~l~~~~~~~--------------  290 (360)
                      .+++||.+.|+|++++++||++    +|||+.-.       . ..          .+.+.......              
T Consensus        11 ~~~dHv~i~V~Dle~a~~fY~~----~LGf~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~   86 (167)
T d1sqda1          11 KRFHHIEFWCGDATNVARRFSW----GLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSAGEIKPTTTASI   86 (167)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHH----HHTCEEEEEESGGGTCSSEEEEEEEETTEEEEEEEECCGGGTTTCCGGGCCCSS
T ss_pred             ceEeEEEEEeCCHHHHHHHHHH----HhCCeEEEEeeccCCCeeEEEEEeeCCCeeEEEecccccccccccccccccccc
Confidence            4789999999999999999999    89986310       0 00          11111100000              


Q ss_pred             c-----------ccCCCCeeEEEEEeCCHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCccc
Q 018138          291 E-----------YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDF  355 (360)
Q Consensus       291 ~-----------~~~g~g~~hiaf~V~Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  355 (360)
                      .           ...+.|++|+||.|+|+++++++|+++|+++..+|...+++ .++++++.+.+...+|+++..-
T Consensus        87 ~~~~~~~~~~~~~~~~~G~~Hiaf~VdDi~aa~~~l~~~G~~~~~~P~~~~~~-~~~a~I~~~gd~~~~~v~r~~~  161 (167)
T d1sqda1          87 PSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNEA-VTIAEVKLYGDVVLRYVSYKAE  161 (167)
T ss_dssp             TTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTT-EEEEEEEEETTEEEEEEEECCC
T ss_pred             ccCCcchHHHhhhccCCCceEEEEEeCCHHHHHHHHHHCCCEEecCCeecCCC-EEEEEEEccCCcEEEEEecCCC
Confidence            0           01256899999999999999999999999999999887665 7889999999999999998644

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.22  E-value=3.3e-11  Score=103.90  Aligned_cols=102  Identities=19%  Similarity=0.190  Sum_probs=72.4

Q ss_pred             ccceeEEEEEEeC--CHHHHHHHHHHhcCCEEEEEeeCCCCCeEEEEEeeCCCCceEEEEEEecCCCCC--------CcC
Q 018138          111 DKRRMLHVVYRVG--DLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK--------YDI  180 (360)
Q Consensus       111 ~~~~l~HV~l~V~--Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~--------~~~  180 (360)
                      ++++|+||++.|+  |++++++||+++|||+.....+.++....+.............+.+..+.....        ...
T Consensus         2 Gl~~IDHIa~~V~~~~l~~a~~FY~~vlGf~~~~~~di~~~~~~l~s~~~~~~~~~~~~~l~~~~~~~~sqi~~fl~~~~   81 (203)
T d1cjxa2           2 GLKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLNEESSKGAGQIEEFLMQFN   81 (203)
T ss_dssp             SEEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTSSCEEEEEEECTTCCSHHHHHHHHHT
T ss_pred             CCCeeCeeEeccChhhHHHHHHHHHHHhCCEEeEEEecCCCcceEEEEEeeccccccceecccCCCCCccHHHHHHHhcC
Confidence            4679999999998  999999999999999998776554443333332222222233344433222111        124


Q ss_pred             CCcceEEEEEECCHHHHHHHHHHcCCeEecCC
Q 018138          181 GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREP  212 (360)
Q Consensus       181 g~g~~hi~f~V~Dld~~~~rL~~~G~~~~~~p  212 (360)
                      |.|++||||.|+|+.+++++|+++|++++..|
T Consensus        82 g~GiqHIAf~vdDI~aav~~L~~~Gv~fL~~p  113 (203)
T d1cjxa2          82 GEGIQHVAFLTDDLVKTWDALKKIGMRFMTAP  113 (203)
T ss_dssp             SSBCCEEEEEESCHHHHHHHHHHTTCCBCCCC
T ss_pred             CCCCceEEEEeCCHHHHHHHHHhcCCccccCc
Confidence            67999999999999999999999999988754

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.21  E-value=2e-11  Score=95.92  Aligned_cols=99  Identities=21%  Similarity=0.233  Sum_probs=67.9

Q ss_pred             eeeecCHHHHHHHhhhcceEEeeeccCCC-ccEEEEEEeCCc------ccccCCCCeeEEEEEeCCHHHHHHHHHHcCCe
Q 018138          249 MLRVGDLDRAINFYKKYTIAVMGYGPEDK-NAVLELTYNHGV------TEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGK  321 (360)
Q Consensus       249 ~L~V~D~e~a~~FY~~~~~~~lG~~~~~~-~~~l~l~~~~~~------~~~~~g~g~~hiaf~V~Dl~~~~~~l~~~G~~  321 (360)
                      .|.|+|+++|++||++     |||+.... .....+......      ..........++++.|+|++++++.++++|++
T Consensus         7 ~l~v~Dl~~s~~FY~~-----LGf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~   81 (120)
T d1ecsa_           7 NLPSRDFDSTAAFYER-----LGFGIVFRDAGWMILQRGDLMLEFFAHPGLDPLASWFSCCLRLDDLAEFYRQCKSVGIQ   81 (120)
T ss_dssp             EEEESCHHHHHHHHHT-----TTCEEEEECSSEEEEEETTEEEEEEECTTCCGGGCCCEEEEEESCHHHHHHHHHHTTCC
T ss_pred             EEEeCCHHHHHHHHHH-----cCCeeEEecCceeeeecceeccccccccccccCCCCcEEEEEECCHHHHHHHHhhhhhh
Confidence            3999999999999984     67754321 111111111000      00111234568999999999999999999888


Q ss_pred             Eee-------CCcccCCCCcEEEEEECCCCCeEEEEcCc
Q 018138          322 ITR-------EPGPLPGINTKITACLDPDGWKSVFVDNL  353 (360)
Q Consensus       322 i~~-------~p~~~~~~~~~~~~~~DPdG~~iel~~~~  353 (360)
                      +..       +|...+++ .+.+||+|||||+|||+|..
T Consensus        82 ~~~~~~~~~~~~~~~~~G-~r~~~~~DPDGn~iei~q~d  119 (120)
T d1ecsa_          82 ETSSGYPRIHAPELQGWG-GTMAALVDPDGTLLRLIQNE  119 (120)
T ss_dssp             BCSSSSSEEEEEEECTTS-SEEEEEECTTSCEEEEEECC
T ss_pred             hccccccccccceecCCC-cEEEEEECCCCCEEEEEEcc
Confidence            644       45556664 68899999999999999864

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.20  E-value=1.6e-11  Score=103.11  Aligned_cols=107  Identities=17%  Similarity=0.100  Sum_probs=81.7

Q ss_pred             CCceeceeeecCHHHHHHHhhhcceEEeeeccC------C--Cc----------cEEEEEE--eCCccc-----------
Q 018138          243 EPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPE------D--KN----------AVLELTY--NHGVTE-----------  291 (360)
Q Consensus       243 ~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~------~--~~----------~~l~l~~--~~~~~~-----------  291 (360)
                      .+++||.|.|+|++++++||++    .|||+.-      .  ..          ..+.+..  ..+...           
T Consensus        12 ~~~~Hi~i~V~D~e~a~~FY~~----~LGf~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (172)
T d1sp8a1          12 LAFHHVELWCADAASAAGRFSF----GLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADAATAALPSFSAA   87 (172)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHH----HHTCCEEEEESGGGTCCSEEEEEEEETTEEEEEEEECCSSCCGGGCSSTTCCHH
T ss_pred             CEEEEEEEEeCCHHHHHHHHHH----hhCceEEEEecccccceeEEEEEeccCCeeeEEeeccCCCchhhhcccccCCcc
Confidence            4799999999999999999999    8998641      0  00          1111111  000000           


Q ss_pred             ------ccCCCCeeEEEEEeCCHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCcc
Q 018138          292 ------YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  354 (360)
Q Consensus       292 ------~~~g~g~~hiaf~V~Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  354 (360)
                            ...+.|+.|+||.|+|+++++++++++|+++..+|....++ .++++++.|.+..++|+++.+
T Consensus        88 ~~~~~~~~~g~Gi~Hiaf~VdDi~aa~~~l~~~Ga~~~~~P~~~~~g-~~~a~v~~~g~~~~~lve~~~  155 (172)
T d1sp8a1          88 AARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRG-FRLAEVELYGDVVLRYVSYPD  155 (172)
T ss_dssp             HHHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEETT-EEEEEEEEETTEEEEEEECCT
T ss_pred             hhhhhhhhcCCceEEEEEeeCcHHHHHHHHHHCcCEeccCCccCCCC-EEEEEEECCCCcEEEEEecCC
Confidence                  01367999999999999999999999999999999877664 688999999888999999864

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.10  E-value=1.2e-10  Score=93.38  Aligned_cols=100  Identities=15%  Similarity=0.162  Sum_probs=72.5

Q ss_pred             eceeeecCHHHHHHHhhhcceEEeeeccCCC--------------ccEEEEEEeCCc------c------cccCCCCeeE
Q 018138          247 QVMLRVGDLDRAINFYKKYTIAVMGYGPEDK--------------NAVLELTYNHGV------T------EYDKGNGYAQ  300 (360)
Q Consensus       247 hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~--------------~~~l~l~~~~~~------~------~~~~g~g~~h  300 (360)
                      .+.+.|.|.++|++||++    +||++....              -...++......      .      .........+
T Consensus        10 ~l~v~~~~~~eAi~FY~~----~fG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (135)
T d1xy7a_          10 MLLVEAQKVGDAVTFYKS----AFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSFVVCDVSSLPGFSTAKSEGSGVT   85 (135)
T ss_dssp             EEEECTTCHHHHHHHHHH----HHCCEEC---------------CCCEEEEEETTEEEEEEEGGGSTTCCCCCTTSCCCE
T ss_pred             EEEEECCCHHHHHHHHHH----HhCCEEEEEEecCCccccccCCcEEEEEEEECCeeeeccccccccccccCCCCCcceE
Confidence            355677899999999999    999864211              111222211000      0      0111123468


Q ss_pred             EEEEeCCHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEc
Q 018138          301 IAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD  351 (360)
Q Consensus       301 iaf~V~Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  351 (360)
                      +++.|+|++++++++.++|+++..+|...+++ .+.++|+||+|+.|+|.|
T Consensus        86 l~~~v~d~~~~~~~~~~~g~~~~~~~~~~~~g-~~~~~v~Dp~G~~W~i~e  135 (135)
T d1xy7a_          86 FLLGTKDAEAAVAKAVDAGAVKVEVTEAEVEL-GFKGKVTDPFGVTWIFAE  135 (135)
T ss_dssp             EEEECSCHHHHHHHHHHTTCEECCCCHHHHHT-TEEEEEECTTSCEEEEEC
T ss_pred             EEEeecCcceeEEEeecccceEecCccccccc-CEEEEEECCCCCEEEEeC
Confidence            99999999999999999999999999988886 689999999999999975

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

Probab=99.10  E-value=4.9e-11  Score=93.55  Aligned_cols=99  Identities=12%  Similarity=0.056  Sum_probs=67.4

Q ss_pred             eeeecCHHHHHHHhhhcceEEeeeccCCCc-cEEEEEEeCCcccc-----cCCCCeeEEEEEeCCHHHHHHHHHHcCCeE
Q 018138          249 MLRVGDLDRAINFYKKYTIAVMGYGPEDKN-AVLELTYNHGVTEY-----DKGNGYAQIAIGTDDVYKTAEAIKLSGGKI  322 (360)
Q Consensus       249 ~L~V~D~e~a~~FY~~~~~~~lG~~~~~~~-~~l~l~~~~~~~~~-----~~g~g~~hiaf~V~Dl~~~~~~l~~~G~~i  322 (360)
                      .|.|+|+++|++||++    +|||+..... ....+.........     .......++.+.+.|++++.+++++++...
T Consensus        10 vL~v~Dl~~s~~FY~~----vLG~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~   85 (122)
T d1jifa_          10 VLTAVDVPANVSFWVD----TLGFEKDFGDRDFAGVRRGDIRLHISRTEHQIVADNTSAWIEVTDPDALHEEWARAVSTD   85 (122)
T ss_dssp             EEEESSHHHHHHHHHH----TTCCEEEEECSSEEEEEETTEEEEEEECSCHHHHTTCEEEEEESCHHHHHHHHHTTSCSC
T ss_pred             EEEcCCHHHHHHHHHh----hhCCceEecCCceeEeeeeeeeeeeeccccccccceeEEEEeechhHHHHHHHHhhcceE
Confidence            4899999999999999    9999753221 11222211110000     111245689999999999999999998876


Q ss_pred             eeCCcc-------cCCCCcEEEEEECCCCCeEEEEcC
Q 018138          323 TREPGP-------LPGINTKITACLDPDGWKSVFVDN  352 (360)
Q Consensus       323 ~~~p~~-------~~~~~~~~~~~~DPdG~~iel~~~  352 (360)
                      ...+..       .+++ ++.+|++|||||+|||..-
T Consensus        86 ~~~~~~~~~~~~~~~~g-~~~~~~~DPdGn~ief~~~  121 (122)
T d1jifa_          86 YADTSGPAMTPVGESPA-GREFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             TTCTTSCEECCCEEETT-EEEEEEECTTCCEEEEEEC
T ss_pred             EeeccccccCccccCCC-eEEEEEECCCCCEEEEEeC
Confidence            544321       1222 6899999999999999864

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.04  E-value=9.6e-10  Score=95.84  Aligned_cols=96  Identities=19%  Similarity=0.278  Sum_probs=66.2

Q ss_pred             ccccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCC-----CCCeEEEEEeeCCCCceEEEEEEecCC---CCC---
Q 018138          109 KSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIP-----EDRYTNAFLGYGPEDSHFVVELTYNYG---VDK---  177 (360)
Q Consensus       109 ~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~-----~~~~~~~~l~~g~~~~~~~lel~~~~~---~~~---  177 (360)
                      +.++++|+||++.|+|++++++||+++|||+...+....     ........+...++  ...+.+.+...   ...   
T Consensus         4 d~Gl~~IDHI~i~V~dld~a~~fY~~vLGf~~~~~~~~~~i~~~~~~l~s~v~~~~~g--~v~~~l~E~~~~~~~~s~i~   81 (224)
T d1sp8a2           4 DYGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSE--NVLLPLNEPVHGTKRRSQIQ   81 (224)
T ss_dssp             CCSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSS--CCEEEEEEECCCSSSCCHHH
T ss_pred             CCCcCeeeeeEEeccCHHHHHHHHHHHhCCEEEEEeccccccccceeEEEEEEEcCCC--ccceeeeeecCCCCCccHHH
Confidence            457899999999999999999999999999987654322     12233333433332  23445543221   111   


Q ss_pred             ----CcCCCcceEEEEEECCHHHHHHHHHHcCC
Q 018138          178 ----YDIGTGFGHFGIAVEDVAKTVDLVKAKGG  206 (360)
Q Consensus       178 ----~~~g~g~~hi~f~V~Dld~~~~rL~~~G~  206 (360)
                          ...+.|++||||.|+|+.++++.|+++|+
T Consensus        82 ~FL~~~~g~GiqHIAf~vdDI~~av~~L~arGv  114 (224)
T d1sp8a2          82 TFLDHHGGPGVQHMALASDDVLRTLREMQARSA  114 (224)
T ss_dssp             HHHHHHTSSEEEEEEEEETTHHHHHHHHHTSGG
T ss_pred             HHHHhccCCCceeEEEEeCCHHHHHHHHHhccc
Confidence                11457999999999999999999998764

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.02  E-value=2.6e-09  Score=91.27  Aligned_cols=101  Identities=16%  Similarity=0.243  Sum_probs=70.6

Q ss_pred             ccceeEEEEEEeC--CHHHHHHHHHHhcCCEEEEEeeC-----CCCCeEEEEEeeCCCCceEEEEEEecCCCC--C----
Q 018138          111 DKRRMLHVVYRVG--DLDKTIKFYTECLGMKLLRKRDI-----PEDRYTNAFLGYGPEDSHFVVELTYNYGVD--K----  177 (360)
Q Consensus       111 ~~~~l~HV~l~V~--Dle~a~~FY~~vLG~~~~~~~~~-----~~~~~~~~~l~~g~~~~~~~lel~~~~~~~--~----  177 (360)
                      +.++|+||++.|+  ++++++.||+++|||+.......     +.......-+...  .....+.+..+....  .    
T Consensus         3 ~f~~IDHia~avp~~~l~~av~fY~~vfGf~~~~~~~~~di~~~~~~l~s~~~~s~--~~~v~l~lne~~~~~~~s~i~~   80 (199)
T d1t47a2           3 TFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADG--TLKVKFPINEPALAKKKSQIDE   80 (199)
T ss_dssp             SCCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECT--TSCSEEEEEEECCSSSCCHHHH
T ss_pred             cceeeCceEeccChhhHHHHHHHHHHHhCCeEeeEecccccccceeEEEEeecccc--ccccceeecccCccccccchhh
Confidence            5678999999999  99999999999999998754321     1222222223222  223344444322111  1    


Q ss_pred             ---CcCCCcceEEEEEECCHHHHHHHHHHcCCeEecCCe
Q 018138          178 ---YDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPG  213 (360)
Q Consensus       178 ---~~~g~g~~hi~f~V~Dld~~~~rL~~~G~~~~~~p~  213 (360)
                         ...|.|++||||.|+|+.+++++|+++|++++..|.
T Consensus        81 FL~~~~g~GiQHIAl~tdDI~~av~~L~~~G~~fL~~p~  119 (199)
T d1t47a2          81 YLEFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTPD  119 (199)
T ss_dssp             HHHHHTSCEEEEEEEECSCHHHHHHHHHHTTCCBCCCCG
T ss_pred             hhhhcCCCcceEEEEEcCCHHHHHHHHHHcCCCCCCCCh
Confidence               124679999999999999999999999999988773

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

Probab=99.01  E-value=3.6e-10  Score=87.88  Aligned_cols=98  Identities=14%  Similarity=0.067  Sum_probs=65.6

Q ss_pred             ceeeecCHHHHHHHhhhcceEEeeeccCCCc-cEEEEEEeCCcc-----cccCCCCeeEEEEEeCCHHHHHHHHHHcCCe
Q 018138          248 VMLRVGDLDRAINFYKKYTIAVMGYGPEDKN-AVLELTYNHGVT-----EYDKGNGYAQIAIGTDDVYKTAEAIKLSGGK  321 (360)
Q Consensus       248 v~L~V~D~e~a~~FY~~~~~~~lG~~~~~~~-~~l~l~~~~~~~-----~~~~g~g~~hiaf~V~Dl~~~~~~l~~~G~~  321 (360)
                      -.|.|+|+++|++||++    +||++..... ....+.......     ......+..++.+.+++++...+.+.+++.+
T Consensus         8 pvL~v~D~~~s~~FY~~----~LG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (120)
T d1xrka_           8 PVLTARDVAEAVEFWTD----RLGFSRVFVEDDFAGVVRDDVTLFISAVQDQVVPDNTQAWVWVRGLDELYAEWSEVVST   83 (120)
T ss_dssp             EEEEESCHHHHHHHHHH----TTCCEEEEECSSEEEEEETTEEEEEEECSCTTTGGGCEEEEEEECHHHHHHHHTTTSBS
T ss_pred             EEEEECCHHHHHHHHHH----hhCCeEEEECCCeeEEecccceeeccccccccCCCCceEEEeeccHHHHHHHHHHhhhH
Confidence            34899999999999999    9999753221 111111111000     0112235578889999999888777665444


Q ss_pred             --------EeeCCcccCCCCcEEEEEECCCCCeEEEEc
Q 018138          322 --------ITREPGPLPGINTKITACLDPDGWKSVFVD  351 (360)
Q Consensus       322 --------i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  351 (360)
                              +..++.++++  ++.+||+|||||.|||+.
T Consensus        84 ~~~~~~~~~~~~~~~~~~--g~~~~~~DPdGn~ief~~  119 (120)
T d1xrka_          84 NFRDASGPAMTEIVEQPW--GREFALRDPAGNCVHFVA  119 (120)
T ss_dssp             CTTTCSSCEECCCEEETT--EEEEEEECTTCCEEEEEE
T ss_pred             HhhhcccccccCceecCC--EEEEEEECCCCCEEEEEE
Confidence                    4445555666  588999999999999975

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=9.6e-10  Score=94.75  Aligned_cols=102  Identities=16%  Similarity=0.251  Sum_probs=70.3

Q ss_pred             cccceeEEEEEEeCC--HHHHHHHHHHhcCCEEEEEeeCC---C--CCeEEEEEeeCCCCceEEEEEEecCCC--CC---
Q 018138          110 SDKRRMLHVVYRVGD--LDKTIKFYTECLGMKLLRKRDIP---E--DRYTNAFLGYGPEDSHFVVELTYNYGV--DK---  177 (360)
Q Consensus       110 ~~~~~l~HV~l~V~D--le~a~~FY~~vLG~~~~~~~~~~---~--~~~~~~~l~~g~~~~~~~lel~~~~~~--~~---  177 (360)
                      .++.+|+||++.|++  ++++++||+++|||+.....+..   .  ...+...+...+.  ...+.+..+...  ..   
T Consensus        20 ~gl~~IDHv~~~Vp~~~ld~av~fY~~vfGf~~~~~~~~~~i~~~~~~l~s~~l~s~~~--~i~~~lne~~~~~~~sqi~   97 (210)
T d1sqia2          20 CNLEIIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEE--SIKMPINEPAPGRKKSQIQ   97 (210)
T ss_dssp             CCEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEECCC-----------CEEEEEECTTS--CCEEEEEECC-----CHHH
T ss_pred             CCcceeCceEeccCchhHHHHHHHHHHHhCCEEEEEecccccCCceeEEEEEEEEecCc--cccccccccCCCCcccHHH
Confidence            467899999999998  99999999999999876532211   1  1122233333333  334444442211  11   


Q ss_pred             ----CcCCCcceEEEEEECCHHHHHHHHHHcCCeEecCCe
Q 018138          178 ----YDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPG  213 (360)
Q Consensus       178 ----~~~g~g~~hi~f~V~Dld~~~~rL~~~G~~~~~~p~  213 (360)
                          ...|.|++||||.|+|+.+++++|+++|+++...|.
T Consensus        98 ~fl~~~~G~GiQHIAf~t~DI~~av~~L~~~Gv~fL~~P~  137 (210)
T d1sqia2          98 EYVDYNGGAGVQHIALRTEDIITTIRHLRERGMEFLAVPS  137 (210)
T ss_dssp             HHHHHHTSSEEEEEEEEESCHHHHHHHHHHHTCCBCCCCH
T ss_pred             HHHhhcCCCCeeEEEEEcCCHHHHHHHHHHcCCCCCCCCc
Confidence                124789999999999999999999999999988774

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.94  E-value=1.8e-08  Score=80.64  Aligned_cols=114  Identities=17%  Similarity=0.117  Sum_probs=75.7

Q ss_pred             EEeC-CHHHHHHHHHHhcCCEEEEEeeCCCC------------CeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceE
Q 018138          120 YRVG-DLDKTIKFYTECLGMKLLRKRDIPED------------RYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGH  186 (360)
Q Consensus       120 l~V~-Dle~a~~FY~~vLG~~~~~~~~~~~~------------~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~h  186 (360)
                      |... |.++|++||+++||+++.......+.            ....+.+.+++.    .+.......... ....+-.+
T Consensus         8 l~f~g~a~eAl~FY~~~fG~e~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g~----~~~~~d~~~~~~-~~~~~~~~   82 (137)
T d1u6la_           8 LIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGSF----ALMASDNHPAYP-YEGIKGCS   82 (137)
T ss_dssp             EEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETTE----EEEEEECCTTSC-CCCCCSEE
T ss_pred             EEECCCHHHHHHHHHHHCCCEEEEEEEcccCCccccCCCCCCCeEEEEEEEEcCe----EEEecccCCccc-ccCCCcEE
Confidence            4445 99999999999999999865443221            122233444321    222222111111 12224467


Q ss_pred             EEEEECCHH--HHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeecC
Q 018138          187 FGIAVEDVA--KTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (360)
Q Consensus       187 i~f~V~Dld--~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~~  239 (360)
                      +++.+++.+  +.+.++.++|+++..+|...++|.+ +.+|+||+|+.|+|-.+.
T Consensus        83 ~~l~~~~~d~~~~~~~~l~~G~~v~~p~~~~~wG~~-~g~v~Dp~G~~W~i~~~~  136 (137)
T d1u6la_          83 ISLNVDSKAEAERLFNALAEGGSVQMPLGPTFWAAS-FGMFTDRFGVAWMVNCEQ  136 (137)
T ss_dssp             EEEECSSHHHHHHHHHHHHTTSEEEEEEEEETTEEE-EEEEECTTSCEEEEEESC
T ss_pred             EEEEcCCHHHHHHHHhhcccCceeecCccccCCCcE-EEEEECCCCCEEEEEecC
Confidence            888887644  5577778899999999999999875 699999999999997654

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=98.88  E-value=4.2e-10  Score=92.23  Aligned_cols=105  Identities=11%  Similarity=0.077  Sum_probs=77.3

Q ss_pred             CCceeceeeecCHHHHHHHhhhcceEEeeeccCCC--ccE--------EEEEEeCCccc------ccCCCCeeEEEEEeC
Q 018138          243 EPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPEDK--NAV--------LELTYNHGVTE------YDKGNGYAQIAIGTD  306 (360)
Q Consensus       243 ~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~~~--~~~--------l~l~~~~~~~~------~~~g~g~~hiaf~V~  306 (360)
                      .+++||.+.|+|++++.+||++     |||.....  ...        +.+..+.....      ..+|+|++|+||.|+
T Consensus         8 ~Gidhv~fav~d~~~~~~~~~~-----lGF~~~~~~~~~~~~l~~~G~i~ll~~~~~~s~~~~~~~~hg~gv~hiaf~V~   82 (150)
T d1cjxa1           8 MGFEFIEFASPTPGTLEPIFEI-----MGFTKVATHRSKNVHLYRQGEINLILNNEPNSIASYFAAEHGPSVCGMAFRVK   82 (150)
T ss_dssp             EEEEEEEEECSSTTSSHHHHHH-----TTCEEEEEESSSSEEEEEETTEEEEEECCSSSHHHHHHHHHSSEEEEEEEEES
T ss_pred             CCEEEEEEecCCHHHHHHHHHH-----hCCEEEecccceEEEEEecCcEEEEecCCCCCHhHhHHhhCCCceEEEEEEeC
Confidence            4789999999999999999984     67763211  111        22222221111      135789999999999


Q ss_pred             CHHHHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCcc
Q 018138          307 DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  354 (360)
Q Consensus       307 Dl~~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  354 (360)
                      |+++++++++++|++++.+|.....  ..+..+++|+|.++.|+++.+
T Consensus        83 D~~~a~~~a~~~Ga~~i~~~~~~g~--~~~~~i~g~gg~~i~Fv~~~~  128 (150)
T d1cjxa1          83 DSQKAYNRALELGAQPIHIDTGPME--LNLPAIKGIGGAPLYLIDRFG  128 (150)
T ss_dssp             CHHHHHHHHHHTTCCBCCCCCCTTC--BCCCEEECGGGCEEEEECCCS
T ss_pred             CHHHHHHHHHHCCCEEcccCCCCCc--eeeeEEEcCCCCEEEEECcCC
Confidence            9999999999999998877643222  467889999999999998754

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.75  E-value=2.4e-08  Score=87.09  Aligned_cols=95  Identities=16%  Similarity=0.271  Sum_probs=64.4

Q ss_pred             cccceeEEEEEEeCCHHHHHHHHHHhcCCEEEEEeeCCC-----CCeEEEEEeeCCCCceEEEEEEecCCC----CC---
Q 018138          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE-----DRYTNAFLGYGPEDSHFVVELTYNYGV----DK---  177 (360)
Q Consensus       110 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~-----~~~~~~~l~~g~~~~~~~lel~~~~~~----~~---  177 (360)
                      ..+.+|+||++.|+|++++.+||+++||+.........+     ......-+....  ....+.+.+....    ..   
T Consensus        18 ~gl~~IDHI~iaVpdld~a~~~y~~~lG~~~~~~~~~~di~~~~~~l~s~v~~s~~--g~v~~~l~E~~~~~~~~sqi~~   95 (230)
T d1sqda2          18 YGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASND--EMVLLPINEPVHGTKRKSQIQT   95 (230)
T ss_dssp             SSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTT--SCSEEEEEEECCC---CCHHHH
T ss_pred             CCcCccCcceecccCHHHHHHHHHHHcCCeeeEEecccccccceeeEeeccccCCC--cccceeEEeecCCCCCcchHHH
Confidence            357899999999999999999999999998887543221     111222222222  2344555543211    10   


Q ss_pred             ---CcCCCcceEEEEEECCHHHHHHHHHHcCC
Q 018138          178 ---YDIGTGFGHFGIAVEDVAKTVDLVKAKGG  206 (360)
Q Consensus       178 ---~~~g~g~~hi~f~V~Dld~~~~rL~~~G~  206 (360)
                         ...|.|++||||.|+|+.+++++|+++|.
T Consensus        96 FL~~~~G~GiQHIAf~tdDI~aav~~LrarG~  127 (230)
T d1sqda2          96 YLEHNEGAGLQHLALMSEDIFRTLREMRKRSS  127 (230)
T ss_dssp             HHHHHTSCEEEEEEEEESCHHHHHHHHHHHGG
T ss_pred             HHhhccCCceeEEEEEeCCHHHHHHHHHHhhc
Confidence               12578999999999999999999999754

>d1u7ia_ d.32.1.7 (A:) Hypothetical protein PA1358 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1358
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.61  E-value=1e-06  Score=69.94  Aligned_cols=115  Identities=17%  Similarity=0.187  Sum_probs=74.9

Q ss_pred             EEEEEeCCHHHHHHHHHHhcCCEEEEEee-------CCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEE
Q 018138          117 HVVYRVGDLDKTIKFYTECLGMKLLRKRD-------IPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGI  189 (360)
Q Consensus       117 HV~l~V~Dle~a~~FY~~vLG~~~~~~~~-------~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f  189 (360)
                      ++.+.-+|.+++++||+++||.+.+.+..       .+.+....+-|.+++.    .+-+...........+ ....+++
T Consensus         9 yL~f~g~~a~eAi~FY~~~Fg~~~v~~~~~~~~~~~~~~g~v~ha~l~i~~~----~i~~~d~~~~~~~~~~-~~~s~~l   83 (134)
T d1u7ia_           9 FLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGDQ----SVHCIDSHVRHAFDFT-PAFSFFV   83 (134)
T ss_dssp             EEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETTE----EEEEEEESSCCSCCCC-TTEEEEE
T ss_pred             EEEECCcCHHHHHHHHHHhCCCeEEEEEEEcCCCCCCCCCCEEEEEEEECCE----EEEEecCCCCCCCCCC-CceEEEE
Confidence            44455568999999999999987654321       1233445566666532    2333332222222222 2346788


Q ss_pred             EECCHHHH--HHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEee
Q 018138          190 AVEDVAKT--VDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (360)
Q Consensus       190 ~V~Dld~~--~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~  237 (360)
                      .+++.+..  +.+..++|+++..++.+..+|.+ +..++||.|+.|.|--
T Consensus        84 ~~~~~d~~~~~~~~l~~gg~v~~p~~~~~~g~~-~g~v~D~fGv~W~i~~  132 (134)
T d1u7ia_          84 DCESNAQIERLAEALSDGGKALMPLGDYGFSQR-FAWLADRFGVSWQLNL  132 (134)
T ss_dssp             ECCCHHHHHHHHHHHHTTSEEEEEEECCSSSSE-EEEEECTTSCEEEEEE
T ss_pred             EeccHHHHHHHHHHHhcCCEEecCcccccccce-EEEEECCCCCEEEEEc
Confidence            88764443  55566889999999998888876 6889999999999854

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=98.46  E-value=9.5e-08  Score=81.71  Aligned_cols=81  Identities=23%  Similarity=0.282  Sum_probs=58.6

Q ss_pred             CCceeceeeec--CHHHHHHHhhhcceEEeeeccCC------CccEE--------------EEEEeCCc-c-------cc
Q 018138          243 EPLCQVMLRVG--DLDRAINFYKKYTIAVMGYGPED------KNAVL--------------ELTYNHGV-T-------EY  292 (360)
Q Consensus       243 ~~i~hv~L~V~--D~e~a~~FY~~~~~~~lG~~~~~------~~~~l--------------~l~~~~~~-~-------~~  292 (360)
                      .+|+||.+.|+  |++++.+||++    +|||+...      ....+              .+...... .       ..
T Consensus         4 ~~IDHIa~~V~~~~l~~a~~FY~~----vlGf~~~~~~di~~~~~~l~s~~~~~~~~~~~~~l~~~~~~~~sqi~~fl~~   79 (203)
T d1cjxa2           4 KVIDHLTHNVYRGRMVYWANFYEK----LFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLNEESSKGAGQIEEFLMQ   79 (203)
T ss_dssp             EEEEEECEECCTTHHHHHHHHHHH----HHCCEEEEEEEEECSSCEEEEEEEECTTSSCEEEEEEECTTCCSHHHHHHHH
T ss_pred             CeeCeeEeccChhhHHHHHHHHHH----HhCCEEeEEEecCCCcceEEEEEeeccccccceecccCCCCCccHHHHHHHh
Confidence            46899999997  89999999999    99997421      11111              11111100 0       01


Q ss_pred             cCCCCeeEEEEEeCCHHHHHHHHHHcCCeEeeCCc
Q 018138          293 DKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPG  327 (360)
Q Consensus       293 ~~g~g~~hiaf~V~Dl~~~~~~l~~~G~~i~~~p~  327 (360)
                      ..|.|++|+||.|+|+.+++++|+++|+++...|.
T Consensus        80 ~~g~GiqHIAf~vdDI~aav~~L~~~Gv~fL~~pp  114 (203)
T d1cjxa2          80 FNGEGIQHVAFLTDDLVKTWDALKKIGMRFMTAPP  114 (203)
T ss_dssp             HTSSBCCEEEEEESCHHHHHHHHHHTTCCBCCCCC
T ss_pred             cCCCCCceEEEEeCCHHHHHHHHHhcCCccccCch
Confidence            24679999999999999999999999999988653

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.37  E-value=1e-06  Score=70.06  Aligned_cols=56  Identities=14%  Similarity=0.039  Sum_probs=46.0

Q ss_pred             CeeEEEEEeCCHH--HHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcCc
Q 018138          297 GYAQIAIGTDDVY--KTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  353 (360)
Q Consensus       297 g~~hiaf~V~Dl~--~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  353 (360)
                      +-.++++.+++.+  +.+.++.++|+++..+|.+.+++ .+..+|+||+|+.|+|...+
T Consensus        79 ~~~~~~l~~~~~d~~~~~~~~l~~G~~v~~p~~~~~wG-~~~g~v~Dp~G~~W~i~~~~  136 (137)
T d1u6la_          79 KGCSISLNVDSKAEAERLFNALAEGGSVQMPLGPTFWA-ASFGMFTDRFGVAWMVNCEQ  136 (137)
T ss_dssp             CSEEEEEECSSHHHHHHHHHHHHTTSEEEEEEEEETTE-EEEEEEECTTSCEEEEEESC
T ss_pred             CcEEEEEEcCCHHHHHHHHhhcccCceeecCccccCCC-cEEEEEECCCCCEEEEEecC
Confidence            4467888877544  55777778999999999999986 68899999999999997654

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=98.34  E-value=4e-07  Score=77.34  Aligned_cols=80  Identities=23%  Similarity=0.429  Sum_probs=59.1

Q ss_pred             CCceeceeeec--CHHHHHHHhhhcceEEeeeccCCC---------ccEE--------------EEEEeC--Cc-c----
Q 018138          243 EPLCQVMLRVG--DLDRAINFYKKYTIAVMGYGPEDK---------NAVL--------------ELTYNH--GV-T----  290 (360)
Q Consensus       243 ~~i~hv~L~V~--D~e~a~~FY~~~~~~~lG~~~~~~---------~~~l--------------~l~~~~--~~-~----  290 (360)
                      ..|+||.+.|+  +++++..||++    +|||.....         ...+              .+....  .. .    
T Consensus         5 ~~IDHia~avp~~~l~~av~fY~~----vfGf~~~~~~~~~di~~~~~~l~s~~~~s~~~~v~l~lne~~~~~~~s~i~~   80 (199)
T d1t47a2           5 QAIDHCVGNVELGRMNEWVGFYNK----VMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPALAKKKSQIDE   80 (199)
T ss_dssp             CEEEEEEEECCTTCHHHHHHHHHH----HHCCEECSCCBCHHHHTTTTSEEEEEEECTTSCSEEEEEEECCSSSCCHHHH
T ss_pred             eeeCceEeccChhhHHHHHHHHHH----HhCCeEeeEecccccccceeEEEEeeccccccccceeecccCccccccchhh
Confidence            57999999998  99999999999    999864211         0011              111101  00 0    


Q ss_pred             --cccCCCCeeEEEEEeCCHHHHHHHHHHcCCeEeeCC
Q 018138          291 --EYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREP  326 (360)
Q Consensus       291 --~~~~g~g~~hiaf~V~Dl~~~~~~l~~~G~~i~~~p  326 (360)
                        ....|+|++||||.|+|+.+++++|+++|+++...|
T Consensus        81 FL~~~~g~GiQHIAl~tdDI~~av~~L~~~G~~fL~~p  118 (199)
T d1t47a2          81 YLEFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTP  118 (199)
T ss_dssp             HHHHHTSCEEEEEEEECSCHHHHHHHHHHTTCCBCCCC
T ss_pred             hhhhcCCCcceEEEEEcCCHHHHHHHHHHcCCCCCCCC
Confidence              013467999999999999999999999999999877

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.31  E-value=3.9e-07  Score=78.04  Aligned_cols=81  Identities=20%  Similarity=0.334  Sum_probs=58.8

Q ss_pred             CCceeceeeecC--HHHHHHHhhhcceEEeeeccCC----C-------------------ccEEEEEEeC-Cc--c----
Q 018138          243 EPLCQVMLRVGD--LDRAINFYKKYTIAVMGYGPED----K-------------------NAVLELTYNH-GV--T----  290 (360)
Q Consensus       243 ~~i~hv~L~V~D--~e~a~~FY~~~~~~~lG~~~~~----~-------------------~~~l~l~~~~-~~--~----  290 (360)
                      ..|+||.+.|++  ++++.+||++    +|||....    .                   ...+.+.... +.  .    
T Consensus        23 ~~IDHv~~~Vp~~~ld~av~fY~~----vfGf~~~~~~~~~~i~~~~~~l~s~~l~s~~~~i~~~lne~~~~~~~sqi~~   98 (210)
T d1sqia2          23 EIIDHIVGNQPDQEMESASEWYLK----NLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGRKKSQIQE   98 (210)
T ss_dssp             EEEEEEEEECCTTCHHHHHHHHHH----HHCCEEECCC-----------CEEEEEECTTSCCEEEEEECC-----CHHHH
T ss_pred             ceeCceEeccCchhHHHHHHHHHH----HhCCEEEEEecccccCCceeEEEEEEEEecCccccccccccCCCCcccHHHH
Confidence            479999999987  9999999999    99985210    0                   0111111110 00  0    


Q ss_pred             --cccCCCCeeEEEEEeCCHHHHHHHHHHcCCeEeeCCc
Q 018138          291 --EYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPG  327 (360)
Q Consensus       291 --~~~~g~g~~hiaf~V~Dl~~~~~~l~~~G~~i~~~p~  327 (360)
                        +...|.|++||||.|+|+.+++++|+++|+++...|.
T Consensus        99 fl~~~~G~GiQHIAf~t~DI~~av~~L~~~Gv~fL~~P~  137 (210)
T d1sqia2          99 YVDYNGGAGVQHIALRTEDIITTIRHLRERGMEFLAVPS  137 (210)
T ss_dssp             HHHHHTSSEEEEEEEEESCHHHHHHHHHHHTCCBCCCCH
T ss_pred             HHhhcCCCCeeEEEEEcCCHHHHHHHHHHcCCCCCCCCc
Confidence              0134789999999999999999999999999998773

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=98.29  E-value=5.8e-07  Score=77.78  Aligned_cols=80  Identities=20%  Similarity=0.316  Sum_probs=55.3

Q ss_pred             CCceeceeeecCHHHHHHHhhhcceEEeeeccC------C---C--------------ccEEEEEEeCCc----cc----
Q 018138          243 EPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPE------D---K--------------NAVLELTYNHGV----TE----  291 (360)
Q Consensus       243 ~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~------~---~--------------~~~l~l~~~~~~----~~----  291 (360)
                      .+++||.+.|+|++++.+||++    +|||...      +   .              ...+.+......    ..    
T Consensus         8 ~~IDHI~i~V~dld~a~~fY~~----vLGf~~~~~~~~~~i~~~~~~l~s~v~~~~~g~v~~~l~E~~~~~~~~s~i~~F   83 (224)
T d1sp8a2           8 SRFDHIVGNVPELAPAAAYFAG----FTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPVHGTKRRSQIQTF   83 (224)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHH----HHCCEEEEEEEC--------CEEEEEEECSSSCCEEEEEEECCCSSSCCHHHHH
T ss_pred             CeeeeeEEeccCHHHHHHHHHH----HhCCEEEEEeccccccccceeEEEEEEEcCCCccceeeeeecCCCCCccHHHHH
Confidence            4799999999999999999999    9998531      0   0              011111111111    00    


Q ss_pred             --ccCCCCeeEEEEEeCCHHHHHHHHHHcC----CeEeeCC
Q 018138          292 --YDKGNGYAQIAIGTDDVYKTAEAIKLSG----GKITREP  326 (360)
Q Consensus       292 --~~~g~g~~hiaf~V~Dl~~~~~~l~~~G----~~i~~~p  326 (360)
                        ...|.|++|+||.|+|+++++++|+++|    +++...|
T Consensus        84 L~~~~g~GiqHIAf~vdDI~~av~~L~arGv~~G~~fl~~p  124 (224)
T d1sp8a2          84 LDHHGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAPP  124 (224)
T ss_dssp             HHHHTSSEEEEEEEEETTHHHHHHHHHTSGGGTSCCBCCCC
T ss_pred             HHhccCCCceeEEEEeCCHHHHHHHHHhccccccceecccc
Confidence              1235799999999999999999999875    5555554

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.05  E-value=2.4e-06  Score=74.06  Aligned_cols=77  Identities=18%  Similarity=0.316  Sum_probs=52.9

Q ss_pred             CCceeceeeecCHHHHHHHhhhcceEEeeeccC------C---C--------------ccEEEEEEeCCc----c-----
Q 018138          243 EPLCQVMLRVGDLDRAINFYKKYTIAVMGYGPE------D---K--------------NAVLELTYNHGV----T-----  290 (360)
Q Consensus       243 ~~i~hv~L~V~D~e~a~~FY~~~~~~~lG~~~~------~---~--------------~~~l~l~~~~~~----~-----  290 (360)
                      .+|+||.+.|+|++++.+||++    ++|+..-      +   .              ...+.+......    .     
T Consensus        21 ~~IDHI~iaVpdld~a~~~y~~----~lG~~~~~~~~~~di~~~~~~l~s~v~~s~~g~v~~~l~E~~~~~~~~sqi~~F   96 (230)
T d1sqda2          21 RRLDHAVGNVPELGPALTYVAG----FTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPINEPVHGTKRKSQIQTY   96 (230)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHH----HHCCEEEEEEC--------CCEEEEEEECTTSCSEEEEEEECCC---CCHHHHH
T ss_pred             CccCcceecccCHHHHHHHHHH----HcCCeeeEEecccccccceeeEeeccccCCCcccceeEEeecCCCCCcchHHHH
Confidence            4799999999999999999998    7776421      0   0              011111111011    1     


Q ss_pred             -cccCCCCeeEEEEEeCCHHHHHHHHHHc----CCeEe
Q 018138          291 -EYDKGNGYAQIAIGTDDVYKTAEAIKLS----GGKIT  323 (360)
Q Consensus       291 -~~~~g~g~~hiaf~V~Dl~~~~~~l~~~----G~~i~  323 (360)
                       ....|.|++||||.|+|+.+++++|+++    |+++.
T Consensus        97 L~~~~G~GiQHIAf~tdDI~aav~~LrarG~~~G~~f~  134 (230)
T d1sqda2          97 LEHNEGAGLQHLALMSEDIFRTLREMRKRSSIGGFDFM  134 (230)
T ss_dssp             HHHHTSCEEEEEEEEESCHHHHHHHHHHHGGGTSCCBC
T ss_pred             HhhccCCceeEEEEEeCCHHHHHHHHHHhhcccCcccc
Confidence             0134789999999999999999999996    55555

>d1tsja_ d.32.1.7 (A:) Hypothetical protein MW1090 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein MW1090
species: Staphylococcus aureus [TaxId: 1280]

Probab=97.94  E-value=0.00016  Score=56.49  Aligned_cols=108  Identities=11%  Similarity=0.108  Sum_probs=68.0

Q ss_pred             EEeC-CHHHHHHHHHHhcCCEEEEEe-e------CCCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEE
Q 018138          120 YRVG-DLDKTIKFYTECLGMKLLRKR-D------IPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (360)
Q Consensus       120 l~V~-Dle~a~~FY~~vLG~~~~~~~-~------~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V  191 (360)
                      |... |.+++.+||+++||-..+.+. .      ..++....+-|.+++.    .+-+.......  ..   -.++.+.+
T Consensus        10 l~f~g~a~eAi~FY~~vFg~~~v~~~~~~~~~~~~~~g~i~ha~l~i~g~----~~~~~d~~~~~--~~---~~s~~v~~   80 (129)
T d1tsja_          10 LMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNGQ----VFMAIDANSGT--EL---PISLFVTV   80 (129)
T ss_dssp             EECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETTE----EEEEEC------------CCCEEEEC
T ss_pred             EEECCCHHHHHHHHHHHcCCcEEEEEEecCCCCCCCCCcEEEEEEEECCE----EEEeecCCCCC--CC---CEEEEecc
Confidence            5565 999999999999975433322 1      1234455566666532    23332221111  11   12467788


Q ss_pred             CCHHHH---HHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeec
Q 018138          192 EDVAKT---VDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (360)
Q Consensus       192 ~Dld~~---~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~  238 (360)
                      ++.+++   +++| ++|+++..++...++|.+ +..++||.|+.|.|..+
T Consensus        81 ~~~~e~~~~~~~L-~~gg~v~~p~~~~~~g~~-~g~v~D~fGv~W~i~~p  128 (129)
T d1tsja_          81 KDTIEMERLFNGL-KDEGAILMPKTNMPPYRE-FAWVQDKFGVSFQLALP  128 (129)
T ss_dssp             SSHHHHHHHHHHH-HTTCEEEEEEEEETTEEE-EEEEECTTSCEEEEEEC
T ss_pred             CCHHHHHHHHHHh-ccCCEEecccccccccce-EEEEECCCCCEEEEeCC
Confidence            876554   4455 577799998888888865 68999999999998754

>d1u7ia_ d.32.1.7 (A:) Hypothetical protein PA1358 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1358
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.70  E-value=0.00022  Score=55.94  Aligned_cols=51  Identities=12%  Similarity=-0.018  Sum_probs=39.6

Q ss_pred             eEEEEEeCCHH--HHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEE
Q 018138          299 AQIAIGTDDVY--KTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFV  350 (360)
Q Consensus       299 ~hiaf~V~Dl~--~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~  350 (360)
                      ..+++.+++.+  +.+.+..+.|+++..++.+.+++ .+...++||.|+.|.|.
T Consensus        79 ~s~~l~~~~~d~~~~~~~~l~~gg~v~~p~~~~~~g-~~~g~v~D~fGv~W~i~  131 (134)
T d1u7ia_          79 FSFFVDCESNAQIERLAEALSDGGKALMPLGDYGFS-QRFAWLADRFGVSWQLN  131 (134)
T ss_dssp             EEEEEECCCHHHHHHHHHHHHTTSEEEEEEECCSSS-SEEEEEECTTSCEEEEE
T ss_pred             eEEEEEeccHHHHHHHHHHHhcCCEEecCccccccc-ceEEEEECCCCCEEEEE
Confidence            46777776544  33445556789999999988886 68999999999999985

>d1tsja_ d.32.1.7 (A:) Hypothetical protein MW1090 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein MW1090
species: Staphylococcus aureus [TaxId: 1280]

Probab=97.03  E-value=0.002  Score=49.87  Aligned_cols=51  Identities=14%  Similarity=0.130  Sum_probs=39.5

Q ss_pred             EEEEEeCCHH---HHHHHHHHcCCeEeeCCcccCCCCcEEEEEECCCCCeEEEEcC
Q 018138          300 QIAIGTDDVY---KTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  352 (360)
Q Consensus       300 hiaf~V~Dl~---~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  352 (360)
                      .+.+.+++.+   +++++|. .|+++..++.+.+++ .+...++||.|+.|.|..+
T Consensus        75 s~~v~~~~~~e~~~~~~~L~-~gg~v~~p~~~~~~g-~~~g~v~D~fGv~W~i~~p  128 (129)
T d1tsja_          75 SLFVTVKDTIEMERLFNGLK-DEGAILMPKTNMPPY-REFAWVQDKFGVSFQLALP  128 (129)
T ss_dssp             CEEEECSSHHHHHHHHHHHH-TTCEEEEEEEEETTE-EEEEEEECTTSCEEEEEEC
T ss_pred             EEEeccCCHHHHHHHHHHhc-cCCEEeccccccccc-ceEEEEECCCCCEEEEeCC
Confidence            4666666655   4555664 677999999888886 6889999999999999764

>d1u69a_ d.32.1.7 (A:) Hypothetical protein PA2721 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA2721
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.90  E-value=0.084  Score=41.68  Aligned_cols=100  Identities=13%  Similarity=0.097  Sum_probs=60.7

Q ss_pred             EeCCHHHHHHHHHHhcCC-EEEEEeeC-------CCCCeEEEEEeeCCCCceEEEEEEecCCCCCCcCCCcceEEEEEEC
Q 018138          121 RVGDLDKTIKFYTECLGM-KLLRKRDI-------PEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVE  192 (360)
Q Consensus       121 ~V~Dle~a~~FY~~vLG~-~~~~~~~~-------~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~  192 (360)
                      .-.|.++|.+||+++||- ++......       +.+.+-.+.+.+++.    .+-...  ..+.+..+.+ .++++.++
T Consensus         9 F~Gna~EAl~FY~~vFg~~~i~~~~~~~~~~p~~~~~~Vmha~l~i~g~----~lm~sD--~~~~~~~~~~-~sl~l~~d   81 (156)
T d1u69a_           9 YDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMGI----PCLGLN--GGPAFRHSEA-FSFQVATD   81 (156)
T ss_dssp             ESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETTE----EEEEEE--CCTTCCCCTT-EEEEEEES
T ss_pred             ECCcHHHHHHHHHHHcCCCEEeEEEecCCCCCCCCCCcEEEEEEEECCe----EEEeec--CCCCCCCCCC-eEEEEecC
Confidence            347899999999999964 44332211       223455566666531    222222  1222333434 47888888


Q ss_pred             C---HHHHHHHHHHcCCeEecCCeecCCCCEEEEEEECCCCCEEEEeec
Q 018138          193 D---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (360)
Q Consensus       193 D---ld~~~~rL~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iEl~~~  238 (360)
                      |   +++++++|.+.| ++..+     -     ..++|+-|..|.|+.+
T Consensus        82 ~~eE~d~~f~~LsegG-~~~~~-----~-----G~v~DkFGV~Wqi~~~  119 (156)
T d1u69a_          82 DQAETDRLWNAIVDNG-GEESA-----C-----GWCRDKWGISWQITPR  119 (156)
T ss_dssp             SHHHHHHHHHHHHHTT-CEECS-----T-----TEEECTTSCEEEEEEH
T ss_pred             CHHHHHHHHHHHhccC-CCCCC-----C-----eEEECCCCCEEEeChH
Confidence            7   666788887665 33321     2     2589999999999975