Citrus Sinensis ID: 018191

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------36
Protein Sequence
MAFSKDNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIGICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKESQMMLQALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDFERSPSFRGGYSSLTPGLSPITPTLSTRLCSGNGELLKHDQDVPSEDFCRQEMY
Secondary Structure (PSIPRED)
ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHccccccccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEEccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHEEHcHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEccEEEEEEcccccccccHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHccccccccccccccccccccccccccccccccccHHHHHHHcc
Coil and Loop (DISEMBL)
MAFSKDNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFIlheklpqlgilGCVMCIAGSIIIVihapqespitsVQEIWSLATQPAFLLYVASVIVLVFILIFHfaprcgntnaLVFIGICSLMGSLSVMSVKALGTSlkltfegknqllypdtWFFMLVVAICVIMQMNYLNKESQMMLQALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTIllhttkdferspsfrggyssltpglspitptlstrlcsgngellkhdqdvpsedfcrqemy
Flexible Loop (DISEMBL)
MAFSKDNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIGICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKESQMMLQALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHttkdferspsfrGGYSSLTPGLSPITPTLSTRLCSGNGellkhdqdvpsedfcrqemy
Low Complexity Region (SEG)
MAFSKDNLKGFVLAllssffigssfiikkkglrraaaasgvragvggFTYLLEPLWWVGMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIGICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKESQMMLQALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDFERSPSFRGGYSSLTPGLSPITPTLSTRLCSGNGELLKHDQDVPSEDFCRQEMY
Disordered region (IsUnstruct)
*******LKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIGICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKESQMMLQALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDF*****************************************************
Disordered Region (DISOPRED)
***SKDNLKGFVLALLSSFFIGSSFIIKKKGLR*************GFTYLLEPLWWVGMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQ****TSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIGICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKESQMMLQALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLH**********************************************************
Disordered Region (DISEMBL)
MAFSKDNLKGFVLALLSSFFIGSSFIIKK**********GVRAGVGGFTYLLEPLWWVGMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIGICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKESQMMLQALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDFERSPSFRGGYSSLTPGLSPITPTLSTRLCSGNGELLKHDQDVPSEDFCRQEMY
Disordered Region (DISPRO)
****KDNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIGICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKESQMMLQALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDF**********************T********NG*********PS*********
Transmembrane Helix (TMHMM)
oooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAFSKDNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIGICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKESQMMLQALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDFERSPSFRGGYSSLTPGLSPITPTLSTRLCSGNGELLKHDQDVPSEDFCRQEMY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	359	2.2.26 [Sep-21-2011]
Q3SWX0	360	Magnesium transporter NIP	yes	no	0.883	0.880	0.455	3e-74
Q5R7Q3	360	Magnesium transporter NIP	yes	no	0.883	0.880	0.452	3e-74
Q8N8Q9	360	Magnesium transporter NIP	yes	no	0.883	0.880	0.452	3e-74
Q9JJC8	359	Magnesium transporter NIP	yes	no	0.883	0.883	0.443	8e-73
Q8BZF2	406	Magnesium transporter NIP	no	no	0.810	0.716	0.459	2e-72
Q0D2K0	466	Magnesium transporter NIP	no	no	0.816	0.628	0.463	2e-69
Q8BMW7	416	Magnesium transporter NIP	no	no	0.799	0.689	0.489	9e-66
Q5RDB8	410	Magnesium transporter NIP	no	no	0.810	0.709	0.493	6e-59
Q6NVV3	410	Magnesium transporter NIP	no	no	0.810	0.709	0.486	4e-58
Q7RTP0	329	Magnesium transporter NIP	no	no	0.788	0.860	0.376	2e-49

>sp|Q3SWX0|NIPA2_BOVIN Magnesium transporter NIPA2 OS=Bos taurus GN=NIPA2 PE=2 SV=1

 Score =  278 bits (712), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 150/329 (45%), Positives = 202/329 (61%), Gaps = 12/329 (3%)

Query: 10  GFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMAIMIVGEVA 69
           G  LA+ SS FIG SFI+KKKGL R A     RAG GG  YL E LWW G+  M  GEVA
Sbjct: 13  GLGLAMSSSIFIGGSFILKKKGLLRLARKGSTRAGQGGHAYLKEWLWWAGLLSMGAGEVA 72

Query: 70  NFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQ 129
           NF AYAFAPA LVTPLGALS++VSA+L+ + L+E+L   G +GC++ I GS ++VIHAP+
Sbjct: 73  NFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVIHAPK 132

Query: 130 ESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIGICSLMGSLS 189
           E  I ++ E+      P F+++   V+++  ILIF   PR G TN LV+I ICS++G++S
Sbjct: 133 EEEIETLNEMSHKLGDPGFVVFATLVVIVSLILIFVVGPRHGQTNILVYITICSVIGAVS 192

Query: 190 VMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKESQMMLQALDTFNT 249
           V   K LG ++K  F GK  L +P TW  +L + +CV  Q+NYLN+       ALD FNT
Sbjct: 193 VSCAKGLGIAIKELFAGKPVLQHPLTWILLLSLIVCVSTQINYLNR-------ALDIFNT 245

Query: 250 AVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDFERS 309
           ++V+PIYYV FT+  I  S I+FK+W       +I  + GF  ++ G  LLH  KD   S
Sbjct: 246 SIVTPIYYVFFTTSVITCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFKDVSFS 305

Query: 310 -----PSFRGGYSSLTPGLSPITPTLSTR 333
                 SFR    ++   LS +   L+  
Sbjct: 306 LSSLPVSFRKDEKAVNGSLSSMYEVLNNN 334

Acts as a selective Mg(2+) transporter.
Bos taurus (taxid: 9913)

>sp|Q5R7Q3|NIPA2_PONAB Magnesium transporter NIPA2 OS=Pongo abelii GN=NIPA2 PE=2 SV=1

 Score =  278 bits (712), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 149/329 (45%), Positives = 202/329 (61%), Gaps = 12/329 (3%)

Query: 10  GFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMAIMIVGEVA 69
           G  LA+ SS FIG SFI+KKKGL R A    +RAG GG  YL E LWW G+  M  GEVA
Sbjct: 13  GLGLAMSSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWWAGLLSMGAGEVA 72

Query: 70  NFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQ 129
           NF AYAFAPA LVTPLGALS++VSA+L+ + L+E+L   G +GC++ I GS ++VIHAP+
Sbjct: 73  NFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVIHAPK 132

Query: 130 ESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIGICSLMGSLS 189
           E  I ++ E+      P F+++   V+++  ILIF   PR G TN LV+I ICS++G+ S
Sbjct: 133 EEEIETLNEMSHKLGDPGFVVFATLVVIVALILIFVVGPRHGQTNILVYITICSVIGAFS 192

Query: 190 VMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKESQMMLQALDTFNT 249
           V  VK LG ++K  F GK  L +P  W  +L + +CV  Q+NYLN+       ALD FNT
Sbjct: 193 VSCVKGLGIAIKELFAGKPVLRHPLAWILLLSLIVCVSTQINYLNR-------ALDIFNT 245

Query: 250 AVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDFERS 309
           ++V+PIYYV FT+  +  S I+FK+W       +I  + GF  ++ G  LLH  KD   S
Sbjct: 246 SIVTPIYYVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFKDVSFS 305

Query: 310 -----PSFRGGYSSLTPGLSPITPTLSTR 333
                 SFR    ++   LS +   L+  
Sbjct: 306 LASLPVSFRKDEKAMNGNLSNMYEVLNNN 334

Acts as a selective Mg(2+) transporter.

Pongo abelii (taxid: 9601)

>sp|Q8N8Q9|NIPA2_HUMAN Magnesium transporter NIPA2 OS=Homo sapiens GN=NIPA2 PE=2 SV=1

 Score =  278 bits (712), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 149/329 (45%), Positives = 202/329 (61%), Gaps = 12/329 (3%)

Query: 10  GFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMAIMIVGEVA 69
           G  LA+ SS FIG SFI+KKKGL R A    +RAG GG  YL E LWW G+  M  GEVA
Sbjct: 13  GLGLAMSSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWWAGLLSMGAGEVA 72

Query: 70  NFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQ 129
           NF AYAFAPA LVTPLGALS++VSA+L+ + L+E+L   G +GC++ I GS ++VIHAP+
Sbjct: 73  NFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVIHAPK 132

Query: 130 ESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIGICSLMGSLS 189
           E  I ++ E+      P F+++   V+++  ILIF   PR G TN LV+I ICS++G+ S
Sbjct: 133 EEEIETLNEMSHKLGDPGFVVFATLVVIVALILIFVVGPRHGQTNILVYITICSVIGAFS 192

Query: 190 VMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKESQMMLQALDTFNT 249
           V  VK LG ++K  F GK  L +P  W  +L + +CV  Q+NYLN+       ALD FNT
Sbjct: 193 VSCVKGLGIAIKELFAGKPVLRHPLAWILLLSLIVCVSTQINYLNR-------ALDIFNT 245

Query: 250 AVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDFERS 309
           ++V+PIYYV FT+  +  S I+FK+W       +I  + GF  ++ G  LLH  KD   S
Sbjct: 246 SIVTPIYYVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFKDVSFS 305

Query: 310 -----PSFRGGYSSLTPGLSPITPTLSTR 333
                 SFR    ++   LS +   L+  
Sbjct: 306 LASLPVSFRKDEKAMNGNLSNMYEVLNNN 334

Acts as a selective Mg(2+) transporter.

Homo sapiens (taxid: 9606)

>sp|Q9JJC8|NIPA2_MOUSE Magnesium transporter NIPA2 OS=Mus musculus GN=Nipa2 PE=1 SV=1

 Score =  274 bits (700), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 146/329 (44%), Positives = 199/329 (60%), Gaps = 12/329 (3%)

Query: 10  GFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMAIMIVGEVA 69
           G  LA+ SS FIG SFI+KKKGL R A    +RAG GG  YL E LWW G+  M  GEVA
Sbjct: 13  GLGLAMTSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWWAGLLSMGAGEVA 72

Query: 70  NFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQ 129
           NF AYAFAPA LVTPLGALS++VSA+L+ + L+E+L   G +GC++ I GS ++VIHAP+
Sbjct: 73  NFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVIHAPK 132

Query: 130 ESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIGICSLMGSLS 189
           E  I ++ E+      P F+++   V+++  I IF   PR G TN LV+I ICS++G+ S
Sbjct: 133 EEEIETLNEMSHKLGDPGFVVFATFVVIVALIFIFVVGPRHGQTNILVYITICSVIGAFS 192

Query: 190 VMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKESQMMLQALDTFNT 249
           V  VK LG ++K    GK  L +P  W  +  + +CV  Q+NYLN+       ALD FNT
Sbjct: 193 VSCVKGLGIAIKELLAGKPVLQHPLAWILLFSLVVCVSTQINYLNR-------ALDIFNT 245

Query: 250 AVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDFERS 309
           ++V+PIYYV FT+  +  S I+FK+W       +I  + GF  ++ G  LLH  KD   S
Sbjct: 246 SIVTPIYYVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFKDVSFS 305

Query: 310 -----PSFRGGYSSLTPGLSPITPTLSTR 333
                 SFR    ++   LS +   L+  
Sbjct: 306 LASLPVSFRKDEKAMNGNLSSMYEVLNNN 334

Acts as a selective Mg(2+) transporter.

Mus musculus (taxid: 10090)

>sp|Q8BZF2|NIPA4_MOUSE Magnesium transporter NIPA4 OS=Mus musculus GN=Nipal4 PE=1 SV=1

 Score =  273 bits (697), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 137/298 (45%), Positives = 199/298 (66%), Gaps = 7/298 (2%)

Query: 10  GFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMAIMIVGEVA 69
           G  LA LS F IG+S I+KKKGL R  A    RA  GG+ YL +P+WW GMA M  GEVA
Sbjct: 61  GVGLAFLSCFLIGTSVILKKKGLIRLVATGATRAVNGGYGYLKDPMWWAGMATMSAGEVA 120

Query: 70  NFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQ 129
           NF AYAFAPA +VTPLGALS+++SA+ + + L E L  LG LGCV+C+AGS ++VIHAP+
Sbjct: 121 NFGAYAFAPATVVTPLGALSVLISAIFSSYCLGESLNLLGKLGCVICMAGSTVMVIHAPK 180

Query: 130 ESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIGICSLMGSLS 189
           E  +T+V E+ S      F+++   ++V   ILIF  APR G  N L++I ICS++GS S
Sbjct: 181 EEKVTTVAEMASKMKDTGFIVFAVLLVVSCLILIFIVAPRYGQRNILIYIIICSVIGSFS 240

Query: 190 VMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKESQMMLQALDTFNT 249
           V +VK LG +++  F+G   + +P  +   L++ + +I+Q+N+LN+       ALD FNT
Sbjct: 241 VTAVKGLGVTIRNFFQGLPVVRHPLPYILSLILGLSIIIQVNFLNR-------ALDIFNT 293

Query: 250 AVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDFE 307
           ++V PIYYV FT++ + +S+++FK+W   +A  I+  + GFV ++ G  +LH  KD +
Sbjct: 294 SLVFPIYYVFFTTVVVASSIVLFKEWYTMSAVDIVGTLSGFVTIILGVFMLHAFKDLD 351

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Ba(2+), Mn(2+), Sr(2+) and Co(2+) but to a much less extent than Mg(2+). May be a receptor for ligands (trioxilins A3 and B3) from the hepoxilin pathway.

Mus musculus (taxid: 10090)

>sp|Q0D2K0|NIPA4_HUMAN Magnesium transporter NIPA4 OS=Homo sapiens GN=NIPAL4 PE=1 SV=3

 Score =  263 bits (671), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 139/300 (46%), Positives = 197/300 (65%), Gaps = 7/300 (2%)

Query: 10  GFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMAIMIVGEVA 69
           G  LA LSSF IGSS I+KKKGL R  A    RA  GGF YL + +WW G   M  GEVA
Sbjct: 121 GLGLAFLSSFLIGSSVILKKKGLLRLVATGATRAVDGGFGYLKDAMWWAGFLTMAAGEVA 180

Query: 70  NFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQ 129
           NF AYAFAPA +VTPLGALS+++SA+L+ + L E L  LG LGCV+C+AGS ++VIHAP+
Sbjct: 181 NFGAYAFAPATVVTPLGALSVLISAILSSYFLRESLNLLGKLGCVICVAGSTVMVIHAPE 240

Query: 130 ESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIGICSLMGSLS 189
           E  +T++ E+ S      F+++   ++V   ILIF  APR G  N L++I ICS++G+ S
Sbjct: 241 EEKVTTIMEMASKMKDTGFIVFAVLLLVSCLILIFVIAPRYGQRNILIYIIICSVIGAFS 300

Query: 190 VMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKESQMMLQALDTFNT 249
           V +VK LG ++K  F+G   + +P  +   L++A+ +  Q+N+LN+       ALD FNT
Sbjct: 301 VAAVKGLGITIKNFFQGLPVVRHPLPYILSLILALSLSTQVNFLNR-------ALDIFNT 353

Query: 250 AVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDFERS 309
           ++V PIYYV FT++ + +S+I+FK+W   +A  I   + GFV ++ G  +LH  KD + S
Sbjct: 354 SLVFPIYYVFFTTVVVTSSIILFKEWYSMSAVDIAGTLSGFVTIILGVFMLHAFKDLDIS 413

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Ba(2+), Mn(2+), Sr(2+) and Co(2+) but to a much less extent than Mg(2+) (By similarity). May be a receptor for ligands (trioxilins A3 and B3) from the hepoxilin pathway.

Homo sapiens (taxid: 9606)

>sp|Q8BMW7|NIPA3_MOUSE Magnesium transporter NIPA3 OS=Mus musculus GN=Nipal1 PE=1 SV=2

 Score =  250 bits (639), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 146/298 (48%), Positives = 198/298 (66%), Gaps = 11/298 (3%)

Query: 10  GFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMAIMIVGEVA 69
           G VLA+ SS FIGSSFI+KKKGL + A     RAG GG +YL E LWW G+  M  GE A
Sbjct: 71  GLVLAISSSVFIGSSFILKKKGLLQLADKGITRAGQGGHSYLKEWLWWAGLLSMGAGEAA 130

Query: 70  NFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQ 129
           NF AYAFAPA LVTPLGALS+++SA+L+ + L+E+L   G +GC++ + GS ++VIHAPQ
Sbjct: 131 NFAAYAFAPATLVTPLGALSVLISAILSSYFLNERLNIHGKIGCILSVLGSTVMVIHAPQ 190

Query: 130 ESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIGICSLMGSLS 189
           E  +TS+ E+      P F+ +   + V+  +LI   AP+ G TN LV+I ICSL+G+ S
Sbjct: 191 EGEVTSLHEMEMKLRDPGFVSFAVIISVISLVLILIVAPKKGQTNILVYIAICSLIGAFS 250

Query: 190 VMSVKALGTSLKLTFEGKNQLLYPDTWFFMLV--VAICVIMQMNYLNKESQMMLQALDTF 247
           V SVK LG ++K   E K   +Y D  FF+L+  +A+ V  Q+NYLNK       ALDTF
Sbjct: 251 VSSVKGLGIAIKELLERKP--VYKDPLFFILLTMLALSVTTQINYLNK-------ALDTF 301

Query: 248 NTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKD 305
           NT++V+PIYYV FTS+ +  S I+F++W G  A  II  + GF  +++G  LLH  K+
Sbjct: 302 NTSLVTPIYYVFFTSMVVTCSAILFQEWYGMKAGDIIGTLSGFFTIINGIFLLHAFKN 359

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+), Cu(2+) and Co(2+) but to a much less extent than Mg(2+).

Mus musculus (taxid: 10090)

>sp|Q5RDB8|NIPA3_PONAB Magnesium transporter NIPA3 OS=Pongo abelii GN=NIPAL1 PE=2 SV=1

 Score =  228 bits (581), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 147/298 (49%), Positives = 197/298 (66%), Gaps = 7/298 (2%)

Query: 10  GFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMAIMIVGEVA 69
           G VLA+ SS FIGSSFI+KKKGL + A+    RAG GG +YL E LWWVG+  M VGE A
Sbjct: 71  GLVLAVSSSIFIGSSFILKKKGLLQLASKGITRAGQGGHSYLKEWLWWVGLLSMGVGEAA 130

Query: 70  NFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQ 129
           NF AYAFAPA LVTPLGALS+++SA+L+ + L+E L   G +GC++ I GS ++VIHAPQ
Sbjct: 131 NFAAYAFAPATLVTPLGALSVLISAILSSYFLNEHLNIHGKIGCILSILGSTVMVIHAPQ 190

Query: 130 ESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIGICSLMGSLS 189
           E  +TS+ E+      P F+ +   V V+  +LI   AP+ G TN LV+I ICSL+G+ S
Sbjct: 191 EEEVTSLHEMEMKLRDPGFISFAVIVTVISLVLILIVAPKKGQTNILVYISICSLIGAFS 250

Query: 190 VMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKESQMMLQALDTFNT 249
           V SVK LG ++K   E K    +P  +  + V+ + V  Q+NYLNK       ALDTFNT
Sbjct: 251 VSSVKGLGIAIKELIEWKPVYKHPLVFVLLAVLVLSVTTQINYLNK-------ALDTFNT 303

Query: 250 AVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDFE 307
           ++V+PIYYV FTS+ +  S I+F++W G TA  II  + GF  ++ G  LLH  K+ +
Sbjct: 304 SIVTPIYYVFFTSMVVTCSAILFQEWYGMTAGDIIGTLSGFFTIIIGIFLLHAFKNTD 361

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+), Cu(2+) and Co(2+) but to a much less extent than Mg(2+).

Pongo abelii (taxid: 9601)

>sp|Q6NVV3|NIPA3_HUMAN Magnesium transporter NIPA3 OS=Homo sapiens GN=NIPAL1 PE=2 SV=1

 Score =  225 bits (573), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 145/298 (48%), Positives = 196/298 (65%), Gaps = 7/298 (2%)

Query: 10  GFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMAIMIVGEVA 69
           G VLA+ SS FIGSSFI+KKKGL + A+    RAG GG +YL E LWWVG+  M  GE A
Sbjct: 71  GLVLAVSSSIFIGSSFILKKKGLLQLASKGFTRAGQGGHSYLKEWLWWVGLLSMGAGEAA 130

Query: 70  NFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQ 129
           NF AYAFAPA LVTPLGALS+++SA+L+ + L+E L   G +GC++ I GS ++VIHAPQ
Sbjct: 131 NFAAYAFAPATLVTPLGALSVLISAILSSYFLNEHLNIHGKIGCILSILGSTVMVIHAPQ 190

Query: 130 ESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIGICSLMGSLS 189
           E  +TS+ E+      P F+ +   + V+  +LI   AP+ G TN LV+I ICSL+G+ S
Sbjct: 191 EEEVTSLHEMEMKLRDPGFISFAVIITVISLVLILIVAPKKGQTNILVYISICSLIGAFS 250

Query: 190 VMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKESQMMLQALDTFNT 249
           V SVK LG ++K   E K    +P  +  + V+ + V  Q+NYLNK       ALDTFNT
Sbjct: 251 VSSVKGLGIAIKELIEWKPVYKHPLVFVLLAVLVLSVTTQINYLNK-------ALDTFNT 303

Query: 250 AVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDFE 307
           ++V+PIYYV FTS+ +  S I+F++W G TA  II  + GF  ++ G  LLH  K+ +
Sbjct: 304 SLVTPIYYVFFTSMVVTCSAILFQEWYGMTAGDIIGTLSGFFTIIIGIFLLHAFKNTD 361

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+), Cu(2+) and Co(2+) but to a much less extent than Mg(2+).

Homo sapiens (taxid: 9606)

>sp|Q7RTP0|NIPA1_HUMAN Magnesium transporter NIPA1 OS=Homo sapiens GN=NIPA1 PE=1 SV=1

 Score =  196 bits (499), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 113/300 (37%), Positives = 177/300 (59%), Gaps = 17/300 (5%)

Query: 10  GFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMAIMIVGEVA 69
           G  +A++SS   GS+F+++KKG+        VRA   G +YL + +WW G   M VG++ 
Sbjct: 31  GLGVAVVSSLVNGSTFVLQKKGI--------VRAKRRGTSYLTDIVWWAGTIAMAVGQIG 82

Query: 70  NFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQ 129
           NF+AY   P VLVTPLGAL +   ++LA ++L EKL  LG LGC++  AGS++++IH+P+
Sbjct: 83  NFLAYTAVPTVLVTPLGALGVPFGSILASYLLKEKLNILGKLGCLLSCAGSVVLIIHSPK 142

Query: 130 ESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIGICSLMGSLS 189
              +T+  E+    T P F+ Y+  V++++ +LIF  AP  G TN +V+I ICSL+GS +
Sbjct: 143 SESVTTQAELEEKLTNPVFVGYLCIVLLMLLLLIFWIAPAHGPTNIMVYISICSLLGSFT 202

Query: 190 VMSVKALGTSLK--LTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKESQMMLQALDTF 247
           V S K +G + +  L     +Q         + V+   +I+Q  Y+NK       AL+ F
Sbjct: 203 VPSTKGIGLAAQDILHNNPSSQRALCLCLVLLAVLGCSIIVQFRYINK-------ALECF 255

Query: 248 NTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDFE 307
           +++V   IYYV+FT+L +LAS I+F++W        +   CGF  V  G +L+   K+F 
Sbjct: 256 DSSVFGAIYYVVFTTLVLLASAILFREWSNVGLVDFLGMACGFTTVSVGIVLIQVFKEFN 315

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+) and Co(2+) but to a much less extent than Mg(2+).

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	359
255572181	346	Non-imprinted in Prader-Willi/Angelman s	0.941	0.976	0.796	1e-159
356501407	349	PREDICTED: magnesium transporter NIPA2-l	0.958	0.985	0.771	1e-156
225436600	350	PREDICTED: magnesium transporter NIPA2 [	0.958	0.982	0.787	1e-156
356554108	349	PREDICTED: magnesium transporter NIPA2-l	0.958	0.985	0.769	1e-155
449442573	348	PREDICTED: magnesium transporter NIPA2-l	0.961	0.991	0.779	1e-153
449476132	348	PREDICTED: magnesium transporter NIPA2-l	0.961	0.991	0.779	1e-152
224054534	299	predicted protein [Populus trichocarpa]	0.832	1.0	0.856	1e-147
226531368	355	non-imprinted in Prader-Willi/Angelman s	0.947	0.957	0.742	1e-144
242088465	357	hypothetical protein SORBIDRAFT_09g02537	0.947	0.952	0.739	1e-144
357494007	349	Magnesium transporter NIPA2 [Medicago tr	0.955	0.982	0.747	1e-142

>gi|255572181|ref|XP_002527030.1| Non-imprinted in Prader-Willi/Angelman syndrome region protein, putative [Ricinus communis] gi|223533592|gb|EEF35330.1| Non-imprinted in Prader-Willi/Angelman syndrome region protein, putative [Ricinus communis]

 Score =  568 bits (1464), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 281/353 (79%), Positives = 312/353 (88%), Gaps = 15/353 (4%)

Query: 1   MAFSKDNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGM 60
           M FSKDNLKGF+LAL SS FIG+SFIIKKKGLRRAAAASGVRAGVGGF+YLLEPLWW+GM
Sbjct: 1   MDFSKDNLKGFILALSSSAFIGASFIIKKKGLRRAAAASGVRAGVGGFSYLLEPLWWLGM 60

Query: 61  AIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGS 120
             MI+GEVANFVAYAFAPAVL+TPLGALSIIVSAVLAHFIL+EKL +LG+LGCVMCIAGS
Sbjct: 61  FTMIIGEVANFVAYAFAPAVLITPLGALSIIVSAVLAHFILNEKLQKLGVLGCVMCIAGS 120

Query: 121 IIIVIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIG 180
           IIIVIHAPQE PITS+QEIWS+ATQPAFLLYVASVIVLVFILIFHF+PRCG+++ LVF G
Sbjct: 121 IIIVIHAPQEHPITSIQEIWSMATQPAFLLYVASVIVLVFILIFHFSPRCGHSDVLVFTG 180

Query: 181 ICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKESQMM 240
           ICSLMGSLSVMSVKA+GT+LKL+ EG NQLLYP+TW+F+ +V  CVI QMNYLNK     
Sbjct: 181 ICSLMGSLSVMSVKAVGTALKLSLEGNNQLLYPETWYFVSIVVTCVITQMNYLNK----- 235

Query: 241 LQALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILL 300
             ALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQ   SI SEICGFVVVLSGT+LL
Sbjct: 236 --ALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQNIGSITSEICGFVVVLSGTVLL 293

Query: 301 HTTKDFERSPSFRGGYSSLTPGLSPITPTLSTRLCSGNGELLKHDQ-DVPSED 352
           H+T+DFERS SFRGGY       +P++PTLST LCSG  E  K+++ DVPS D
Sbjct: 294 HSTRDFERSSSFRGGY-------APLSPTLSTGLCSGKAEFFKYEEGDVPSAD 339

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356501407|ref|XP_003519516.1| PREDICTED: magnesium transporter NIPA2-like [Glycine max]

 Score =  558 bits (1439), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 281/364 (77%), Positives = 311/364 (85%), Gaps = 20/364 (5%)

Query: 1   MAFSKDNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGM 60
           M  SK+NLKG +LAL+SS FIG+SFIIKK+GLRRAAA SGVRAGVGG+ YLLEPLWWVGM
Sbjct: 1   MGLSKENLKGLILALVSSGFIGASFIIKKQGLRRAAAVSGVRAGVGGYYYLLEPLWWVGM 60

Query: 61  AIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGS 120
             MIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLA  IL EKL  LGILGC+MCIAGS
Sbjct: 61  ITMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLADIILKEKLHNLGILGCIMCIAGS 120

Query: 121 IIIVIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIG 180
           IIIVIHAP+E PITSV EIW++ATQPAFL YV SVIVLVFIL+FHFAPRCG+TN LVF G
Sbjct: 121 IIIVIHAPKEQPITSVLEIWNMATQPAFLAYVGSVIVLVFILVFHFAPRCGHTNVLVFTG 180

Query: 181 ICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKESQMM 240
           ICSLMGSLSVMSVKALGTSLKLTFEGKNQL+YP+TWFFMLVVAICVIMQMNYLNK     
Sbjct: 181 ICSLMGSLSVMSVKALGTSLKLTFEGKNQLIYPETWFFMLVVAICVIMQMNYLNK----- 235

Query: 241 LQALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILL 300
             ALDTFNTA+VSPIYYVMFT+LTILASVIMFKDWDGQ+  +I+SEICGF++VLSGTI+L
Sbjct: 236 --ALDTFNTAIVSPIYYVMFTTLTILASVIMFKDWDGQSGGTIVSEICGFIIVLSGTIML 293

Query: 301 HTTKDFERSPSFRGGYSSLTPGLSPITPTLSTRLCSGNGE-LLKHDQDVPSEDFC----R 355
           H TKDFERS SFRG          P++PTLS RL +GNG+ LLK D++  S +      R
Sbjct: 294 HATKDFERSSSFRGS--------DPLSPTLSARLFTGNGDSLLKQDEENGSPESNMRSRR 345

Query: 356 QEMY 359
           QE+Y
Sbjct: 346 QELY 349

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225436600|ref|XP_002279595.1| PREDICTED: magnesium transporter NIPA2 [Vitis vinifera] gi|296083833|emb|CBI24221.3| unnamed protein product [Vitis vinifera]

 Score =  556 bits (1432), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 285/362 (78%), Positives = 316/362 (87%), Gaps = 18/362 (4%)

Query: 2   AFSKDNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMA 61
            FS +N KGFVLALLSS FIG+SFIIKKKGLRRAAA SGVRAGVGG+ YLLEPLWW+GM 
Sbjct: 3   GFSTNNFKGFVLALLSSGFIGASFIIKKKGLRRAAAVSGVRAGVGGYAYLLEPLWWLGMI 62

Query: 62  IMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSI 121
            MIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFIL E+L +LGILGCVMCI+GS+
Sbjct: 63  TMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILKERLHKLGILGCVMCISGSV 122

Query: 122 IIVIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIGI 181
           IIVIHAPQE  I+SVQEIW++ATQ AFLLYV SV+V+VFILIFHFAP+CG+TN LVF GI
Sbjct: 123 IIVIHAPQERSISSVQEIWNMATQTAFLLYVGSVVVVVFILIFHFAPQCGSTNVLVFTGI 182

Query: 182 CSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKESQMML 241
           CSLMGSLSVMSVKALGTSLKLTFEGKNQL++P+TWFFM+VVAICVI QMNYLNK      
Sbjct: 183 CSLMGSLSVMSVKALGTSLKLTFEGKNQLIFPETWFFMVVVAICVITQMNYLNK------ 236

Query: 242 QALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLH 301
            ALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQ+  SIISEICGF+VVLSGTILL+
Sbjct: 237 -ALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQSGGSIISEICGFIVVLSGTILLN 295

Query: 302 TTKDFERSPSFRGGYSSLTPGLSPITPTLSTRLCSGNGELLKHDQD--VPSEDFC--RQE 357
            TKD+E S SFRG Y        P++ +LS RLCSGNGELLKHD++  V S++ C  RQE
Sbjct: 296 VTKDYEDS-SFRGIYH------PPLSSSLSARLCSGNGELLKHDEENLVSSDEICLRRQE 348

Query: 358 MY 359
           +Y
Sbjct: 349 LY 350

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356554108|ref|XP_003545391.1| PREDICTED: magnesium transporter NIPA2-like [Glycine max]

 Score =  555 bits (1429), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 280/364 (76%), Positives = 309/364 (84%), Gaps = 20/364 (5%)

Query: 1   MAFSKDNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGM 60
           M  SK+NLKG +LAL+SS FIG+SFIIKK+GLRRAAA  GVRAGVGG+ YLLEPLWWVGM
Sbjct: 1   MGLSKENLKGLILALVSSGFIGASFIIKKQGLRRAAAVYGVRAGVGGYYYLLEPLWWVGM 60

Query: 61  AIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGS 120
             MI GEVANFVAYAFAPAVLVTPLGALSIIVSAVLA  IL EKL  LGILGC+MCIAGS
Sbjct: 61  ITMIAGEVANFVAYAFAPAVLVTPLGALSIIVSAVLADIILKEKLHNLGILGCIMCIAGS 120

Query: 121 IIIVIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIG 180
           III IHAP+E PITSV EIW++ATQPAFL YV SVIVLVFIL+FHFAPRCG+TN LVF G
Sbjct: 121 IIIFIHAPKEQPITSVLEIWNMATQPAFLAYVGSVIVLVFILVFHFAPRCGHTNVLVFTG 180

Query: 181 ICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKESQMM 240
           ICSLMGSLSVMSVKALGTSLKLTFEGKNQL+YP+TWFFMLVVAICVIMQMNYLNK     
Sbjct: 181 ICSLMGSLSVMSVKALGTSLKLTFEGKNQLIYPETWFFMLVVAICVIMQMNYLNK----- 235

Query: 241 LQALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILL 300
             ALDTFNTA+VSPIYYVMFT+LTILASVIMFKDWDGQ+  +I+SEICGF+VVLSGTI+L
Sbjct: 236 --ALDTFNTAIVSPIYYVMFTTLTILASVIMFKDWDGQSGGTIVSEICGFIVVLSGTIML 293

Query: 301 HTTKDFERSPSFRGGYSSLTPGLSPITPTLSTRLCSGNGE-LLKHDQD--VPSEDFC--R 355
           H TKDFERS SFRG         +P +PTLS RL +GNG+ LLK D++   P  + C  R
Sbjct: 294 HATKDFERSSSFRGS--------APSSPTLSARLFTGNGDSLLKQDEENGSPESNMCSRR 345

Query: 356 QEMY 359
           QE+Y
Sbjct: 346 QELY 349

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449442573|ref|XP_004139056.1| PREDICTED: magnesium transporter NIPA2-like [Cucumis sativus]

 Score =  545 bits (1405), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 282/362 (77%), Positives = 314/362 (86%), Gaps = 17/362 (4%)

Query: 1   MAFSKDNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGM 60
           M FS+DNL G +LALLSS FIG+SFIIKKKGLRRAAAASGVRAGVGG+TYLLEPLWW+GM
Sbjct: 1   MGFSEDNLTGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM 60

Query: 61  AIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGS 120
            IMIVGE ANFVAYAFAPAVLVTPLGALSIIVSAVLAHFIL E+L +LG+LGCVMCIAGS
Sbjct: 61  FIMIVGEAANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILKERLHKLGVLGCVMCIAGS 120

Query: 121 IIIVIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIG 180
           +IIV+HAP+E  ITSVQEIW++ATQPAFLLY+ SV+VLVFIL+ HFAPRCG++N LVF G
Sbjct: 121 VIIVVHAPRELSITSVQEIWTMATQPAFLLYMGSVVVLVFILVIHFAPRCGHSNVLVFTG 180

Query: 181 ICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKESQMM 240
           ICSLMGSLSVMSVKALGTSLKLTFEGKNQL++P+TW FMLVV  CVI QMNYLNK     
Sbjct: 181 ICSLMGSLSVMSVKALGTSLKLTFEGKNQLIFPETWLFMLVVVTCVITQMNYLNK----- 235

Query: 241 LQALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILL 300
             ALDTFNTA+VSPIYYVMFT+LTILASVIMFKDWDGQ+ A+IISEICGFVVVLSGTILL
Sbjct: 236 --ALDTFNTAIVSPIYYVMFTTLTILASVIMFKDWDGQSGATIISEICGFVVVLSGTILL 293

Query: 301 HTTKDFERSPSFRGGYSSLTPGLSPITPTLSTRLCSGNGELLKH-DQDVPSEDFCR--QE 357
              KDFERS SFR  +   TPG    +P+LSTRLC GNGEL K+ D++V SE+ C   QE
Sbjct: 294 QVAKDFERSSSFRANH---TPG----SPSLSTRLCPGNGELAKYNDEEVSSEEICLRIQE 346

Query: 358 MY 359
            Y
Sbjct: 347 SY 348

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449476132|ref|XP_004154650.1| PREDICTED: magnesium transporter NIPA2-like [Cucumis sativus]

 Score =  545 bits (1404), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 282/362 (77%), Positives = 314/362 (86%), Gaps = 17/362 (4%)

Query: 1   MAFSKDNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGM 60
           M FS+DNL G +LALLSS FIG+SFIIKKKGLRRAAAASGVRAGVGG+TYLLEPLWW+GM
Sbjct: 1   MGFSEDNLTGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM 60

Query: 61  AIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGS 120
            IMIVGE ANFVAYAFAPAVLVTPLGALSIIVSAVLAHFIL E+L +LG+LGCVMCIAGS
Sbjct: 61  FIMIVGEAANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILKERLHKLGVLGCVMCIAGS 120

Query: 121 IIIVIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIG 180
           +IIV+HAP+E  ITSVQEIW++ATQPAFLLY+ SV+VLVFIL+ HFAPRCG++N LVF G
Sbjct: 121 VIIVVHAPRELSITSVQEIWNMATQPAFLLYMGSVVVLVFILVIHFAPRCGHSNVLVFTG 180

Query: 181 ICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKESQMM 240
           ICSLMGSLSVMSVKALGTSLKLTFEGKNQL++P+TW FMLVV  CVI QMNYLNK     
Sbjct: 181 ICSLMGSLSVMSVKALGTSLKLTFEGKNQLIFPETWLFMLVVVTCVITQMNYLNK----- 235

Query: 241 LQALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILL 300
             ALDTFNTA+VSPIYYVMFT+LTILASVIMFKDWDGQ+ A+IISEICGFVVVLSGTILL
Sbjct: 236 --ALDTFNTAIVSPIYYVMFTTLTILASVIMFKDWDGQSGATIISEICGFVVVLSGTILL 293

Query: 301 HTTKDFERSPSFRGGYSSLTPGLSPITPTLSTRLCSGNGELLKH-DQDVPSEDFCR--QE 357
              KDFERS SFR  +   TPG    +P+LSTRLC GNGEL K+ D++V SE+ C   QE
Sbjct: 294 QVAKDFERSSSFRANH---TPG----SPSLSTRLCPGNGELAKYNDEEVSSEEICLRIQE 346

Query: 358 MY 359
            Y
Sbjct: 347 SY 348

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224054534|ref|XP_002298308.1| predicted protein [Populus trichocarpa] gi|222845566|gb|EEE83113.1| predicted protein [Populus trichocarpa]

 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 262/306 (85%), Positives = 282/306 (92%), Gaps = 7/306 (2%)

Query: 1   MAFSKDNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGM 60
           M FS+DNLKGFVLAL SS FIG+SFIIKKKGLRRAAAASGVRAGVGGF+YLLEPLWW+GM
Sbjct: 1   MGFSQDNLKGFVLALSSSAFIGASFIIKKKGLRRAAAASGVRAGVGGFSYLLEPLWWLGM 60

Query: 61  AIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGS 120
             MIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFIL+EKL QLGILGCVMCIAGS
Sbjct: 61  ITMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILNEKLHQLGILGCVMCIAGS 120

Query: 121 IIIVIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIG 180
           I+IVIHAPQESPITSVQEIWS+ATQPAFLLYV SVIVLVFI+IFHFAP+CG++N LVF G
Sbjct: 121 IVIVIHAPQESPITSVQEIWSMATQPAFLLYVGSVIVLVFIMIFHFAPQCGHSNVLVFTG 180

Query: 181 ICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKESQMM 240
           ICS MGSLSVMSVKA+GT+LKLTFEG NQLLYP+TWFF+ +VA CVI QMNYLNK     
Sbjct: 181 ICSFMGSLSVMSVKAVGTALKLTFEGNNQLLYPETWFFVFIVATCVITQMNYLNK----- 235

Query: 241 LQALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILL 300
             ALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQ   SIISEICGF+VVLSGTI+L
Sbjct: 236 --ALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQNVGSIISEICGFIVVLSGTIVL 293

Query: 301 HTTKDF 306
           HTT++F
Sbjct: 294 HTTREF 299

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|226531368|ref|NP_001148908.1| non-imprinted in Prader-Willi/Angelman syndrome region protein 1 [Zea mays] gi|194707234|gb|ACF87701.1| unknown [Zea mays] gi|195623140|gb|ACG33400.1| non-imprinted in Prader-Willi/Angelman syndrome region protein 1 [Zea mays] gi|413946035|gb|AFW78684.1| non-imprinted in Prader-Willi/Angelman syndrome region protein 1 [Zea mays]

 Score =  519 bits (1336), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 268/361 (74%), Positives = 304/361 (84%), Gaps = 21/361 (5%)

Query: 3   FSKDNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMAI 62
            S DN+KG VLALLSS FIG+SFIIKKKGLRRAA ASGVRAGVGG++YL+EPLWWVGM I
Sbjct: 12  LSTDNMKGIVLALLSSGFIGASFIIKKKGLRRAAVASGVRAGVGGYSYLMEPLWWVGMII 71

Query: 63  MIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSII 122
           MIVGE+ANFVAYAFAPAVLVTPLGALSIIVSAVLAHFIL+E+L  LG+LGCVMCIAGS++
Sbjct: 72  MIVGEIANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILNERLHALGVLGCVMCIAGSVV 131

Query: 123 IVIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIGIC 182
           IVIHAPQE  ITSV+EIW++ATQPAFLLYVASVIV+VF+L+F+F+P  G +N L++  IC
Sbjct: 132 IVIHAPQEQEITSVKEIWNMATQPAFLLYVASVIVIVFVLVFYFSPLYGQSNVLIYTAIC 191

Query: 183 SLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKESQMMLQ 242
           SLMGSLSVMSVKALGTSLKLTFEG NQL+YP+TWFFMLVVA CV+ QMNYLNK       
Sbjct: 192 SLMGSLSVMSVKALGTSLKLTFEGTNQLIYPETWFFMLVVATCVLTQMNYLNK------- 244

Query: 243 ALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHT 302
           ALDTFNTA+VSPIYYVMFT+LTILASVIMFKDW GQ+  S+ISEICG VVVLSGTILLH 
Sbjct: 245 ALDTFNTAIVSPIYYVMFTTLTILASVIMFKDWSGQSPGSVISEICGLVVVLSGTILLHV 304

Query: 303 TKDFERSPSFRGGYSSLTPGLSPITPTLSTRLCSGNGELLKHDQDVPSED----FCRQEM 358
           TKD+ER P  R  Y       +P++P+L+TRL   NGELLKH  D  + D      RQEM
Sbjct: 305 TKDYERIPQSRSVY-------APLSPSLTTRL---NGELLKHVVDERTSDEEKALRRQEM 354

Query: 359 Y 359
           Y
Sbjct: 355 Y 355

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242088465|ref|XP_002440065.1| hypothetical protein SORBIDRAFT_09g025370 [Sorghum bicolor] gi|241945350|gb|EES18495.1| hypothetical protein SORBIDRAFT_09g025370 [Sorghum bicolor]

 Score =  518 bits (1333), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 267/361 (73%), Positives = 304/361 (84%), Gaps = 21/361 (5%)

Query: 3   FSKDNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMAI 62
            S DN+KG VLALLSS FIG+SFIIKKKGLRRAAAA+GVRAGVGG++YL+EPLWWVGM  
Sbjct: 14  LSTDNMKGIVLALLSSGFIGASFIIKKKGLRRAAAATGVRAGVGGYSYLMEPLWWVGMIT 73

Query: 63  MIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSII 122
           MIVGE+ANFVAYAFAPAVLVTPLGALSIIVSAVLAHFIL+E+L  LG+LGCVMCIAGS++
Sbjct: 74  MIVGEIANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILNERLHALGVLGCVMCIAGSVV 133

Query: 123 IVIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIGIC 182
           IVIHAPQE  ITSV+EIW++A QPAFLLYVASVIV+VF+L+F+F+P  G +N L++  IC
Sbjct: 134 IVIHAPQEQEITSVREIWNMAIQPAFLLYVASVIVIVFVLVFYFSPLYGQSNVLIYTAIC 193

Query: 183 SLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKESQMMLQ 242
           SLMGSLSVMSVKALGTSLKLTFEG NQL+YP+TWFFMLVVA CV+ QMNYLNK       
Sbjct: 194 SLMGSLSVMSVKALGTSLKLTFEGTNQLIYPETWFFMLVVATCVLTQMNYLNK------- 246

Query: 243 ALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHT 302
           ALDTFNTA+VSPIYYVMFT+LTILASVIMFKDW GQ+  SIISEICG VVVLSGTILLH 
Sbjct: 247 ALDTFNTAIVSPIYYVMFTTLTILASVIMFKDWSGQSPGSIISEICGLVVVLSGTILLHV 306

Query: 303 TKDFERSPSFRGGYSSLTPGLSPITPTLSTRLCSGNGELLKHDQDVPSED----FCRQEM 358
           TKD+ER P  R  Y       +P++P+L+TRL   NGELLKH +D  + D      RQEM
Sbjct: 307 TKDYERIPQSRSVY-------APLSPSLTTRL---NGELLKHVEDERTSDEEKALRRQEM 356

Query: 359 Y 359
           Y
Sbjct: 357 Y 357

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357494007|ref|XP_003617292.1| Magnesium transporter NIPA2 [Medicago truncatula] gi|355518627|gb|AET00251.1| Magnesium transporter NIPA2 [Medicago truncatula]

 Score =  511 bits (1315), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 269/360 (74%), Positives = 305/360 (84%), Gaps = 17/360 (4%)

Query: 1   MAFSKDNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGM 60
           M  S +N+ G +LAL SS FIGSSFIIKK+GLRRAA+  GVRAGVGG+ YLLEPLWWVGM
Sbjct: 1   MGLSNENVTGLILALASSLFIGSSFIIKKQGLRRAASTYGVRAGVGGYYYLLEPLWWVGM 60

Query: 61  AIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGS 120
             MIVGEVANF+AYAFAPAVLVTPLGALSIIVSAVLA  IL E+L +LGILG VMCIAGS
Sbjct: 61  ITMIVGEVANFIAYAFAPAVLVTPLGALSIIVSAVLADLILKERLHKLGILGIVMCIAGS 120

Query: 121 IIIVIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIG 180
           IIIVIHAP+E PITSV EIW++ATQPAFL YV SV+VLVF ++FHFAP CG+TN LV+ G
Sbjct: 121 IIIVIHAPKEEPITSVLEIWNMATQPAFLAYVGSVVVLVFFMVFHFAPTCGHTNVLVYTG 180

Query: 181 ICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKESQMM 240
           ICSLMGSLSVMSVKALGTSLKLTFEG NQL+YP TWFFMLVVAICV+MQMNYLNK     
Sbjct: 181 ICSLMGSLSVMSVKALGTSLKLTFEGNNQLVYPQTWFFMLVVAICVVMQMNYLNK----- 235

Query: 241 LQALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILL 300
             ALDTFNTA+VSPIYYVMFT+LTILAS+IMFKDWDGQ+ ++I+SEICGF+VVLSGTI+L
Sbjct: 236 --ALDTFNTAIVSPIYYVMFTTLTILASIIMFKDWDGQSFSTIMSEICGFIVVLSGTIML 293

Query: 301 HTTKDFERSPSFRGGYSSLTPGLSPITPTLSTRLCSGNGE-LLKHDQ--DVPSEDFCRQE 357
           H TKDFERS SFRGG      GL P +PTLS RL +GNG+ LLK D+  + P + F R++
Sbjct: 294 HLTKDFERSHSFRGG------GL-PSSPTLSVRLYTGNGDSLLKDDEENESPEDMFSRRQ 346

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	359
TAIR|locus:2009343	368	AT1G34470 "AT1G34470" [Arabido	0.863	0.842	0.600	1.4e-96
TAIR|locus:2136912	386	AT4G09640 "AT4G09640" [Arabido	0.852	0.792	0.596	4.8e-94
TAIR|locus:2141742	326	AT4G38730 "AT4G38730" [Arabido	0.713	0.785	0.670	1e-93
TAIR|locus:2016084	343	AT1G71900 "AT1G71900" [Arabido	0.835	0.874	0.594	3.4e-93
TAIR|locus:2047112	328	AT2G21120 [Arabidopsis thalian	0.707	0.774	0.655	7e-93
TAIR|locus:2076186	335	AT3G23870 "AT3G23870" [Arabido	0.910	0.976	0.540	6.5e-90
TAIR|locus:2119540	336	AT4G13800 [Arabidopsis thalian	0.754	0.806	0.612	4.6e-89
CGD|CAL0004327	368	orf19.5352 [Candida albicans (	0.690	0.673	0.482	1.3e-66
UNIPROTKB|Q5A5P7	368	CaO19.12812 "Putative uncharac	0.690	0.673	0.482	1.3e-66
UNIPROTKB|F1NMK8	352	NIPAL4 "Uncharacterized protei	0.699	0.713	0.453	3.8e-62

TAIR|locus:2009343 AT1G34470 "AT1G34470" [Arabidopsis thaliana (taxid:3702)]

 Score = 960 (343.0 bits), Expect = 1.4e-96, P = 1.4e-96
 Identities = 191/318 (60%), Positives = 222/318 (69%)

Query:     4 SKDNLKGFVLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTYLLEPLWWVGMAIM 63
             S DN+KG VLA                                 ++YLLEPLWWVGM  M
Sbjct:    16 SSDNIKGLVLALSSSLFIGASFIVKKKGLKRAGASGLRAGSGG-YSYLLEPLWWVGMITM 74

Query:    64 IVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIII 123
             IVGE+ANF AYAFAPA+LVTPLGALSII+SA LAH ILHEKL   G+LGCV+C+ GSI I
Sbjct:    75 IVGEIANFAAYAFAPAILVTPLGALSIIISAALAHVILHEKLHTFGLLGCVLCVVGSITI 134

Query:   124 VIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIGICS 183
             V+HAPQE  I SV ++W+LAT+PAFLLY A+V+    ILI  F P+ G ++ +V+IG+CS
Sbjct:   135 VLHAPQEQEIDSVLQVWNLATEPAFLLYAAAVVGAAIILIVQFVPQYGQSHVMVYIGVCS 194

Query:   184 LMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKESQMMLQA 243
             L+GSLSVMSVKALG +LKLTF G NQL+YP TW F L+V  CVI QMNYLNK       A
Sbjct:   195 LVGSLSVMSVKALGIALKLTFSGMNQLIYPQTWVFTLIVLTCVITQMNYLNK-------A 247

Query:   244 LDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTT 303
             LDTFNTAVVSPIYYVMFTSLTILASVIMFKDWD Q    I++E+CGFV +LSGT LLH T
Sbjct:   248 LDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQDGTQIVTELCGFVTILSGTFLLHKT 307

Query:   304 KDFERSPSFRGGYSSLTP 321
             KD     S  G  +   P
Sbjct:   308 KDMVDGSSSLGNLALRLP 325

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2136912 AT4G09640 "AT4G09640" [Arabidopsis thaliana (taxid:3702)]

 Score = 936 (334.5 bits), Expect = 4.8e-94, P = 4.8e-94
 Identities = 188/315 (59%), Positives = 219/315 (69%)

Query:     4 SKDNLKGFVLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTYLLEPLWWVGMAIM 63
             S DN+KG VLA                                 ++YLLEPLWW+GM  M
Sbjct:    16 SSDNVKGLVLALSSSIFIGASFIVKKKGLKKAGASGLRAGSGG-YSYLLEPLWWIGMITM 74

Query:    64 IVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIII 123
             IVGE+ANF AYAFAPA+LVTPLGALSII+SA LAH IL EKL   GILGC +CI GS+ I
Sbjct:    75 IVGEIANFAAYAFAPAILVTPLGALSIIISASLAHIILQEKLHTFGILGCALCIVGSVTI 134

Query:   124 VIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIGICS 183
             V+HAPQE  I SV E+W+LAT+PAFL Y A+V+    +LI  F P  G ++ +V+IG+CS
Sbjct:   135 VLHAPQEQDIVSVLEVWNLATEPAFLFYAAAVVGAAIVLIVQFIPLYGQSHVMVYIGVCS 194

Query:   184 LMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKESQMMLQA 243
             L+GSLSVMSVKALG +LKLTF G NQL YP TW F ++V  CVI QMNYLNK       A
Sbjct:   195 LIGSLSVMSVKALGIALKLTFSGTNQLGYPQTWVFTVIVLFCVITQMNYLNK-------A 247

Query:   244 LDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTT 303
             LDTFNTAVVSPIYYVMFTSLTILASVIMFKDWD Q+   I++E+CGFV +LSGT LLHTT
Sbjct:   248 LDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQSGTQIMTELCGFVTILSGTFLLHTT 307

Query:   304 KDFERSPSFRGGYSS 318
              D     S +G  SS
Sbjct:   308 TDMVDGES-KGNLSS 321

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2141742 AT4G38730 "AT4G38730" [Arabidopsis thaliana (taxid:3702)]

 Score = 933 (333.5 bits), Expect = 1.0e-93, P = 1.0e-93
 Identities = 177/264 (67%), Positives = 215/264 (81%)

Query:    48 FTYLLEPLWWVGMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQ 107
             +TYLLEPLWWVG+  M  GE+ANFVAY +APAVLVTPLGALSII+SAVLAHF+L EKL +
Sbjct:    45 YTYLLEPLWWVGLVTMTFGEIANFVAYVYAPAVLVTPLGALSIIISAVLAHFLLDEKLRK 104

Query:   108 LGILGCVMCIAGSIIIVIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFA 167
             +G+ GCV CI GS++IVIHAPQE    SV+EIW LA QPAFL+YVA  + +V  LI +  
Sbjct:   105 MGVWGCVCCIVGSVMIVIHAPQEQTPNSVEEIWKLAMQPAFLIYVAISMSIVLALILYCE 164

Query:   168 PRCGNTNALVFIGICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVI 227
             P CG TN LV+IGICSLMGSL+VMS+KA+G ++KLTFEG NQ+ YP+TWFF +V AICV+
Sbjct:   165 PLCGQTNILVYIGICSLMGSLTVMSIKAVGIAIKLTFEGINQIWYPETWFFAMVAAICVV 224

Query:   228 MQMNYLNKESQMMLQALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEI 287
             MQM YLNK       ALDTFN A+VSPIYYVMFT+LTI+AS IMFKDW+GQ   SI SEI
Sbjct:   225 MQMIYLNK-------ALDTFNAAIVSPIYYVMFTTLTIVASAIMFKDWNGQNTDSIASEI 277

Query:   288 CGFVVVLSGTILLHTTKDFER-SP 310
             CGF+ VL+GT++LH+T++ E+ SP
Sbjct:   278 CGFITVLTGTVILHSTREEEQASP 301

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2016084 AT1G71900 "AT1G71900" [Arabidopsis thaliana (taxid:3702)]

 Score = 928 (331.7 bits), Expect = 3.4e-93, P = 3.4e-93
 Identities = 183/308 (59%), Positives = 212/308 (68%)

Query:     4 SKDNLKGFVLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTYLLEPLWWVGMAIM 63
             S DN+KG VLA                                 ++YL EPLWW+GM  M
Sbjct:    16 SSDNIKGLVLALSSSLFIGASFIVKKKGLKKAASTGTRAGVGG-YSYLYEPLWWIGMTTM 74

Query:    64 IVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIII 123
             ++GE+ANF AYAFAPA+LVTPLGA+SII+SAVLAH IL EKL   GILGC +C+ GS  I
Sbjct:    75 LLGEIANFAAYAFAPAILVTPLGAVSIIISAVLAHIILREKLHIFGILGCALCVVGSTTI 134

Query:   124 VIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIGICS 183
             V+HAPQE  I SV E+W+LAT+PAF+ Y + VI     LI  F P+ G TN +V+IGICS
Sbjct:   135 VLHAPQEREIDSVIEVWNLATEPAFMFYASLVIGAAVFLIIRFVPQYGQTNVMVYIGICS 194

Query:   184 LMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKESQMMLQA 243
             L+GSLSVMSVKALG +LKLTF G NQL YP TW F LVV  CV+ Q+NYLNK       A
Sbjct:   195 LVGSLSVMSVKALGIALKLTFSGTNQLFYPQTWIFTLVVLTCVVTQLNYLNK-------A 247

Query:   244 LDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTT 303
             LDTFNTA+VSPIYYVMFTSLTILASVIMFKDWD Q    I++EICGFV +LSGT LLH T
Sbjct:   248 LDTFNTAIVSPIYYVMFTSLTILASVIMFKDWDRQNGTQIVTEICGFVTILSGTFLLHRT 307

Query:   304 KDFERSPS 311
             KD     S
Sbjct:   308 KDMVEGSS 315

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2047112 AT2G21120 [Arabidopsis thaliana (taxid:3702)]

 Score = 925 (330.7 bits), Expect = 7.0e-93, P = 7.0e-93
 Identities = 171/261 (65%), Positives = 212/261 (81%)

Query:    48 FTYLLEPLWWVGMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQ 107
             +TYLLEPLWW GM  MIVGE ANFVAY +APAVLVTPLGALSII+SAVLAHF+L EKL +
Sbjct:    45 YTYLLEPLWWAGMVTMIVGEAANFVAYIYAPAVLVTPLGALSIIISAVLAHFLLKEKLKK 104

Query:   108 LGILGCVMCIAGSIIIVIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFA 167
             +G+LGCV CI GS++IVIHAP+E    SV+EIW+LATQPAFL+YVA  + +V  LI HF 
Sbjct:   105 MGVLGCVSCIVGSVVIVIHAPKEQTPNSVEEIWNLATQPAFLIYVAITMSIVLALILHFE 164

Query:   168 PRCGNTNALVFIGICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVI 227
             P CG TN LV+IGICSLMG+L+VMS+KA+G ++KLT EG +Q+ YP TW F++V   CV+
Sbjct:   165 PLCGQTNILVYIGICSLMGALTVMSIKAIGIAIKLTMEGVSQIGYPQTWLFVMVAVTCVV 224

Query:   228 MQMNYLNKESQMMLQALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEI 287
              Q+ YLNK       ALDTFN A+VSP+YYVMFT+LTI+AS IMFKDW GQ AAS+ SE+
Sbjct:   225 TQLIYLNK-------ALDTFNAAIVSPVYYVMFTTLTIVASAIMFKDWSGQDAASVASEL 277

Query:   288 CGFVVVLSGTILLHTTKDFER 308
             CGF+ VL+GT++LH T++ E+
Sbjct:   278 CGFITVLTGTMILHGTREEEQ 298

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009625 "response to insect" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

TAIR|locus:2076186 AT3G23870 "AT3G23870" [Arabidopsis thaliana (taxid:3702)]

 Score = 897 (320.8 bits), Expect = 6.5e-90, P = 6.5e-90
 Identities = 181/335 (54%), Positives = 222/335 (66%)

Query:     4 SKDNLKGFVLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTYLLEPLWWVGMAIM 63
             S DN+ G +LA                                 + YL EP WW GM  M
Sbjct:     5 SPDNINGVILAVSSSIFIGSSFIIKKKGLKKAGASGVRAGEGG-YGYLKEPWWWAGMITM 63

Query:    64 IVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIII 123
             IVGEVANF AYAFAPA+LVTPLGALSII SAVLAHFIL EKL   GILGC++C+ GS  I
Sbjct:    64 IVGEVANFAAYAFAPAILVTPLGALSIIFSAVLAHFILKEKLHMFGILGCILCVVGSTTI 123

Query:   124 VIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIGICS 183
             V+HAP E  I SV++IW LA +P FL+Y A ++++V ILIF++ PR G T+ +V++GICS
Sbjct:   124 VLHAPHEQKIESVKQIWQLAIEPGFLVYSAVIVIVVAILIFYYEPRYGKTHMIVYVGICS 183

Query:   184 LMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKESQMMLQA 243
             LMGSL+VMSVKA+  ++KLTF G NQ  Y +TW F+LVVA C I+Q+NYLNK       A
Sbjct:   184 LMGSLTVMSVKAVAIAIKLTFSGTNQFKYFNTWIFILVVATCCILQINYLNK-------A 236

Query:   244 LDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTT 303
             LDTFNTAV+SP+YYVMFT+ TI+AS+IMFKDW  Q+   I +E+CGFV +LSGT LLH T
Sbjct:   237 LDTFNTAVISPVYYVMFTTFTIIASMIMFKDWASQSGLKIATELCGFVTILSGTFLLHKT 296

Query:   304 KDFERSPSFRGGYSSLTPGLSPITPTLSTRLCSGN 338
             KD   S S RG  S  T      T + S R  S +
Sbjct:   297 KDMGNSASGRGSISMPTRDTPVFTNSGSGRSSSSD 331

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016036 "cellular response to phosphate starvation" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2119540 AT4G13800 [Arabidopsis thaliana (taxid:3702)]

 Score = 889 (318.0 bits), Expect = 4.6e-89, P = 4.6e-89
 Identities = 171/279 (61%), Positives = 209/279 (74%)

Query:    48 FTYLLEPLWWVGMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQ 107
             + YL EP WW GM  MIVGE+ANF AYAFAPA+LVTPLGALSII SAVLAHFIL EKL  
Sbjct:    48 YGYLYEPWWWAGMITMIVGEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILEEKLHM 107

Query:   108 LGILGCVMCIAGSIIIVIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFA 167
              GILGCV+C+ GS  IV+HAP E  I SV+++W LAT+P FL Y A V+V+V  LIF++ 
Sbjct:   108 FGILGCVLCVVGSTTIVLHAPHEQGIESVKQVWHLATEPGFLAYSAVVLVVVLALIFYYE 167

Query:   168 PRCGNTNALVFIGICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVI 227
             PR G T+ +V++GICSLMGSL+VMSVKA+  ++KLTF G NQ  Y   W F++VV IC I
Sbjct:   168 PRYGKTHMIVYVGICSLMGSLTVMSVKAVAIAIKLTFSGMNQFKYFHAWIFIIVVTICCI 227

Query:   228 MQMNYLNKESQMMLQALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEI 287
             +Q+NYLNK       ALD FNTAV+SP+YYVMFT+ TILAS+IMFKDW  Q+   I +E+
Sbjct:   228 LQINYLNK-------ALDNFNTAVISPVYYVMFTTFTILASMIMFKDWASQSGLQIATEL 280

Query:   288 CGFVVVLSGTILLHTTKDFERSPSFRGGYSSLTPGLSPI 326
             CGFV +LSGT LLH TKD   S S RG  +S +P  +P+
Sbjct:   281 CGFVTILSGTFLLHKTKDMGNSTSLRGS-TSHSPRDTPV 318

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0008150 "biological_process" evidence=ND

CGD|CAL0004327 orf19.5352 [Candida albicans (taxid:5476)]

 Score = 677 (243.4 bits), Expect = 1.3e-66, P = 1.3e-66
 Identities = 123/255 (48%), Positives = 177/255 (69%)

Query:    50 YLLEPLWWVGMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLG 109
             YL  P+WW GM  M +GE+ANF AY FAPA+LVTPLGALS+I+ AVLA   L E+L  LG
Sbjct:    47 YLQNPIWWGGMITMAIGEIANFAAYTFAPAILVTPLGALSVIIGAVLAAIFLKERLGTLG 106

Query:   110 ILGCVMCIAGSIIIVIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPR 169
              +GC +C+ GS+II++HAP +  + +V EI   ATQP F+ Y   V +    +I+   P+
Sbjct:   107 KMGCAICLMGSVIIILHAPPDKEVQTVDEILGYATQPGFMFYCTVVTLYSLFMIYKIVPK 166

Query:   170 CGNTNALVFIGICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQ 229
              GNTN ++++ ICS +GS+SVMS+KA G +LKLT  G NQ  +  T+ F++VVA+C++ Q
Sbjct:   167 YGNTNPMIYLSICSSVGSISVMSIKAFGIALKLTLGGNNQFTHVSTYLFLIVVALCIVTQ 226

Query:   230 MNYLNKESQMMLQALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICG 289
             MNY NK       ALD F+T++V+P+YYV FT+ T+ AS I+FK ++  +A  IIS + G
Sbjct:   227 MNYFNK-------ALDQFDTSIVNPLYYVTFTTFTLAASFILFKGFNTSSAVDIISLLIG 279

Query:   290 FVVVLSGTILLHTTK 304
             F+++ SG  LL+ ++
Sbjct:   280 FLIIFSGVYLLNISR 294

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q5A5P7 CaO19.12812 "Putative uncharacterized protein" [Candida albicans SC5314 (taxid:237561)]

 Score = 677 (243.4 bits), Expect = 1.3e-66, P = 1.3e-66
 Identities = 123/255 (48%), Positives = 177/255 (69%)

Query:    50 YLLEPLWWVGMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLG 109
             YL  P+WW GM  M +GE+ANF AY FAPA+LVTPLGALS+I+ AVLA   L E+L  LG
Sbjct:    47 YLQNPIWWGGMITMAIGEIANFAAYTFAPAILVTPLGALSVIIGAVLAAIFLKERLGTLG 106

Query:   110 ILGCVMCIAGSIIIVIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPR 169
              +GC +C+ GS+II++HAP +  + +V EI   ATQP F+ Y   V +    +I+   P+
Sbjct:   107 KMGCAICLMGSVIIILHAPPDKEVQTVDEILGYATQPGFMFYCTVVTLYSLFMIYKIVPK 166

Query:   170 CGNTNALVFIGICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQ 229
              GNTN ++++ ICS +GS+SVMS+KA G +LKLT  G NQ  +  T+ F++VVA+C++ Q
Sbjct:   167 YGNTNPMIYLSICSSVGSISVMSIKAFGIALKLTLGGNNQFTHVSTYLFLIVVALCIVTQ 226

Query:   230 MNYLNKESQMMLQALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICG 289
             MNY NK       ALD F+T++V+P+YYV FT+ T+ AS I+FK ++  +A  IIS + G
Sbjct:   227 MNYFNK-------ALDQFDTSIVNPLYYVTFTTFTLAASFILFKGFNTSSAVDIISLLIG 279

Query:   290 FVVVLSGTILLHTTK 304
             F+++ SG  LL+ ++
Sbjct:   280 FLIIFSGVYLLNISR 294

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|F1NMK8 NIPAL4 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 635 (228.6 bits), Expect = 3.8e-62, P = 3.8e-62
 Identities = 117/258 (45%), Positives = 173/258 (67%)

Query:    50 YLLEPLWWVGMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLG 109
             YL + LWW G+  M  GE ANF AYAFAPA +VTPLGALS+++SA+L+ ++L E+L  LG
Sbjct:    55 YLKDWLWWAGLLTMGGGEAANFAAYAFAPATIVTPLGALSVLISAILSSYLLGERLNLLG 114

Query:   110 ILGCVMCIAGSIIIVIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPR 169
              LGC++ + GS ++VIHAP+E  +T++ E+     +P FL Y   ++ + F+LI + APR
Sbjct:   115 KLGCMLSLVGSTVMVIHAPEEEEVTTLDEMLFKLKEPGFLAYAVVLLAICFLLILYLAPR 174

Query:   170 CGNTNALVFIGICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQ 229
              G +N L+++ ICS++G+ SV SVK LG ++K  F G+  L +P TW  ++ +   +  Q
Sbjct:   175 YGRSNILIYLTICSVIGAFSVSSVKGLGIAIKGFFAGQPVLQHPLTWILVITLVASITTQ 234

Query:   230 MNYLNKESQMMLQALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICG 289
             +NYLNK       ALD FNT++V PIYYV+FT++ I  S+I+FK+W   T   II  +CG
Sbjct:   235 INYLNK-------ALDIFNTSLVFPIYYVLFTTIVITTSIILFKEWVAMTVVDIIGTVCG 287

Query:   290 FVVVLSGTILLHTTKDFE 307
             F+ ++ G  LLH  KD +
Sbjct:   288 FLTIILGVFLLHAFKDMD 305

GO:0015095 "magnesium ion transmembrane transporter activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q3SWX0	NIPA2_BOVIN	No assigned EC number	0.4559	0.8830	0.8805	yes	no
Q5R7Q3	NIPA2_PONAB	No assigned EC number	0.4528	0.8830	0.8805	yes	no
Q8N8Q9	NIPA2_HUMAN	No assigned EC number	0.4528	0.8830	0.8805	yes	no
Q9JJC8	NIPA2_MOUSE	No assigned EC number	0.4437	0.8830	0.8830	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00022247001 SubName- Full=Chromosome chr6 scaffold_25, whole genome shotgun sequence; (350 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	359
pfam05653	300	pfam05653, Mg_trans_NIPA, Magnesium transporter NI	1e-143
pfam13536	112	pfam13536, EmrE, Multidrug resistance efflux trans	0.002

>gnl|CDD|114381 pfam05653, Mg_trans_NIPA, Magnesium transporter NIPA

 Score =  407 bits (1048), Expect = e-143
 Identities = 187/306 (61%), Positives = 226/306 (73%), Gaps = 8/306 (2%)

Query: 4   SKDNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMAIM 63
           + DN  G +LA+ SS FIGSSFIIKKKGL R A   G+RAG GG+ YL E LWW G+  M
Sbjct: 2   NTDNYIGLILAVSSSIFIGSSFIIKKKGLLRLAR-GGMRAGEGGYGYLKEWLWWAGLLTM 60

Query: 64  IVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIII 123
           IVGE ANF AYAFAPA LVTPLGALS+I+SAVL+ F L+EKL   G LGCV+CI GS +I
Sbjct: 61  IVGEAANFAAYAFAPATLVTPLGALSVIISAVLSSFFLNEKLNLFGKLGCVLCIVGSTVI 120

Query: 124 VIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIGICS 183
           VIHAP+E  I SV+E+W+LAT P FL+YV  V+ +V ILIF   PR G TN LV+I ICS
Sbjct: 121 VIHAPKEQEIESVREVWNLATDPGFLVYVILVVGVVLILIFFVEPRHGQTNILVYITICS 180

Query: 184 LMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKESQMMLQA 243
           L+GSL+VMSVKALG ++KLTF GKNQL YP  W F++VV  CV+ Q+NYLNK       A
Sbjct: 181 LIGSLTVMSVKALGIAIKLTFSGKNQLGYPQFWIFLVVVVTCVVTQINYLNK-------A 233

Query: 244 LDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTT 303
           LD FNT++V+P+YYV FT+  I AS I+FK+W GQ+   I  E+CGF  +L GT LLH T
Sbjct: 234 LDIFNTSIVTPVYYVFFTTSVIAASAILFKEWLGQSFDDIAGELCGFFTILLGTFLLHAT 293

Query: 304 KDFERS 309
           +D E S
Sbjct: 294 RDIEFS 299

NIPA (nonimprinted in Prader-Willi/Angelman syndrome) is a family of integral membrane proteins which function as magnesium transporters. Length = 300

>gnl|CDD|222207 pfam13536, EmrE, Multidrug resistance efflux transporter

 Score = 37.2 bits (87), Expect = 0.002
 Identities = 15/77 (19%), Positives = 35/77 (45%), Gaps = 2/77 (2%)

Query: 55  LWWVGMA-IMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGC 113
           LW +    I  +      +A  + P   V  + AL+ + +A+L   +  ++LP+  +L  
Sbjct: 35  LWLILAGLIGFLFYALLCLALQYGPGW-VVAITALTPVFAALLGRLLFKQRLPKRELLAS 93

Query: 114 VMCIAGSIIIVIHAPQE 130
            + +AG +++ +     
Sbjct: 94  AIILAGVVLMQVTEATG 110

This is a membrane protein family acting as a multidrug resistance efflux transporter. Length = 112

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	359
KOG2922	335	consensus Uncharacterized conserved protein [Funct	100.0
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	100.0
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.24
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	99.16
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.99
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	98.96
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.84
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.83
PRK15430	296	putative chloramphenical resistance permease RarD;	98.77
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.73
PLN00411	358	nodulin MtN21 family protein; Provisional	98.73
PRK11689	295	aromatic amino acid exporter; Provisional	98.6
PRK11272	292	putative DMT superfamily transporter inner membran	98.6
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.52
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.52
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.49
COG2510	140	Predicted membrane protein [Function unknown]	98.48
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	98.37
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.29
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	98.21
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.18
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	98.15
PRK09541	110	emrE multidrug efflux protein; Reviewed	98.11
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	98.1
PRK13499	345	rhamnose-proton symporter; Provisional	98.09
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.04
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	97.85
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	97.74
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	97.71
PLN00411	358	nodulin MtN21 family protein; Provisional	97.69
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	97.67
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.61
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	97.55
PRK11689	295	aromatic amino acid exporter; Provisional	97.49
KOG4510	346	consensus Permease of the drug/metabolite transpor	97.43
PRK11272	292	putative DMT superfamily transporter inner membran	97.43
PRK11431	105	multidrug efflux system protein; Provisional	97.35
COG2510	140	Predicted membrane protein [Function unknown]	97.24
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	97.16
COG2076	106	EmrE Membrane transporters of cations and cationic	97.0
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	96.95
COG2962	293	RarD Predicted permeases [General function predict	96.82
COG0697	292	RhaT Permeases of the drug/metabolite transporter	96.8
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	96.71
PRK09541	110	emrE multidrug efflux protein; Reviewed	96.33
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	96.23
PRK15430	296	putative chloramphenical resistance permease RarD;	96.15
PRK11431	105	multidrug efflux system protein; Provisional	95.86
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	95.73
KOG2765	416	consensus Predicted membrane protein [Function unk	95.67
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	95.64
PRK10650	109	multidrug efflux system protein MdtI; Provisional	95.4
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	95.3
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	95.3
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	95.15
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	94.79
KOG3912	372	consensus Predicted integral membrane protein [Gen	94.74
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	94.5
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	94.43
COG2076	106	EmrE Membrane transporters of cations and cationic	94.08
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	94.02
PF13536	113	EmrE: Multidrug resistance efflux transporter	93.32
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	92.26
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	92.04
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	91.93
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	91.52
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	91.47
KOG4831	125	consensus Unnamed protein [Function unknown]	90.41
COG1742	109	Uncharacterized conserved protein [Function unknow	89.58
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	88.36
PRK02237	109	hypothetical protein; Provisional	88.28
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	85.46
KOG0569	485	consensus Permease of the major facilitator superf	83.91
PRK13499	345	rhamnose-proton symporter; Provisional	83.71
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	83.38
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	82.82
KOG1580	337	consensus UDP-galactose transporter related protei	81.61
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	81.54
PF02694	107	UPF0060: Uncharacterised BCR, YnfA/UPF0060 family;	80.48

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=4.9e-73  Score=539.70  Aligned_cols=299  Identities=68%  Similarity=1.154  Sum_probs=293.3

Q ss_pred             CCcchhHHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhcCcccCCcccccccchhHHHHHHHHHHHHHHHHHHHhhchhhh
Q 018191            2 AFSKDNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMAIMIVGEVANFVAYAFAPAVL   81 (359)
Q Consensus         2 ~~~~~~~iGv~LAl~ss~~~a~G~vlqk~~~~~~~~~~~~~~g~~~~~~l~~p~W~~G~~l~~~g~~~~~~Al~~ap~sl   81 (359)
                      .|++||++|+++|+.||++++.++++|||+++|.+.. +.|++.++++|+++|+||+|+++|++|+++||+||+|||+++
T Consensus        14 ~~~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~~-~~ra~~gg~~yl~~~~Ww~G~ltm~vGei~NFaAYaFAPasL   92 (335)
T KOG2922|consen   14 RMSSDNIIGLVLAISSSIFIGSSFILKKKGLKRAGAS-GLRAGEGGYGYLKEPLWWAGMLTMIVGEIANFAAYAFAPASL   92 (335)
T ss_pred             hhccCceeeeeehhhccEEEeeehhhhHHHHHHHhhh-cccccCCCcchhhhHHHHHHHHHHHHHhHhhHHHHhhchHhh
Confidence            3789999999999999999999999999999999885 889998999999999999999999999999999999999999


Q ss_pred             hhchhhHHHHHHHHHHHHHhcCCCCccchhhHHHHhhhhheeeeecCCCCCCCCHHHHHHHhcChhHHHHHHHHHHHHHH
Q 018191           82 VTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFI  161 (359)
Q Consensus        82 v~Pl~a~~li~~~ila~~~L~e~l~~~~~~G~~li~~G~~liv~~a~~~~~~~s~~el~~~~~~~~fl~y~~~~~~~~~~  161 (359)
                      |+||||+++++|+++|+++||||++..+.+||++|++|++++|.|+|++++..|++|+|+++++|+|+.|+.+.++++++
T Consensus        93 VtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~t~~el~~~~~~~~Fliy~~~iil~~~i  172 (335)
T KOG2922|consen   93 VTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEIESVEEVWELATEPGFLVYVIIIILIVLI  172 (335)
T ss_pred             hccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccccccHHHHHHHhcCccHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999998889


Q ss_pred             HHHhhcccCCCchhHHHHHHHHhhhhHHHHHHHHHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHHhccchhhhh
Q 018191          162 LIFHFAPRCGNTNALVFIGICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKESQMML  241 (359)
Q Consensus       162 li~~~~~r~g~~~~~~y~~i~gl~g~~tvl~~K~v~~~l~~~~~g~~~~~~~~ty~~l~~~v~~~l~Q~~~ln~~~~~~~  241 (359)
                      ++++++||+|++|+++|+++|+++|++||+++|++++++|++++|+||+.+|+||+++++++.|+.+|++||||      
T Consensus       173 l~~~~~p~~g~tnilvyi~i~s~iGS~tV~svKalg~aiklt~~g~~ql~~~~ty~~~l~~~~~~~~Q~~yLNk------  246 (335)
T KOG2922|consen  173 LIFFYAPRYGQTNILVYIGICSLIGSLTVMSVKALGIAIKLTFSGNNQLFYPLTWIFLLVVATCVSTQMNYLNK------  246 (335)
T ss_pred             HheeecccccccceeehhhHhhhhcceeeeeHHHHHHHHHHHhcCCcccccHHHHHHHHHHHHHHHHHHHHHHH------
Confidence            98999999999999999999999999999999999999999999999999999999999999999999999999      


Q ss_pred             hhhhccCceeecchhHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHhhhhhcccCCCCC
Q 018191          242 QALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDFER  308 (359)
Q Consensus       242 ~AL~~~~~~~v~Pv~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~~~~~Gv~lLs~~~~~~~  308 (359)
                       ||++||+++|.|+||++||+++|++|.|+|+||++++..++.+++||+.+++.|+++|+++||++.
T Consensus       247 -AL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~ti~~G~flL~~~kd~~~  312 (335)
T KOG2922|consen  247 -ALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFVTIFLGIFLLHRTKDMEI  312 (335)
T ss_pred             -HHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHHHhhheeeEeeeeccccc
Confidence             999999999999999999999999999999999999999999999999999999999999999886

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=100.00  E-value=3.3e-66  Score=501.06  Aligned_cols=298  Identities=47%  Similarity=0.873  Sum_probs=285.8

Q ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhcCcccCCcccccccchhHHHHHHHHHHHHHHHHHHHhhchhhhh
Q 018191            3 FSKDNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMAIMIVGEVANFVAYAFAPAVLV   82 (359)
Q Consensus         3 ~~~~~~iGv~LAl~ss~~~a~G~vlqk~~~~~~~~~~~~~~g~~~~~~l~~p~W~~G~~l~~~g~~~~~~Al~~ap~slv   82 (359)
                      |-+|+++|+.+|++||+++++|.++|||+++|.++. +.|++.+.++|++||+||+|++++++|+++|++||+|+|+++|
T Consensus         1 ~~~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~-~~~~~~~~~~~l~~~~W~~G~~~~~~g~~~~~~Al~~ap~slv   79 (300)
T PF05653_consen    1 MNTDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRG-SLRAGSGGRSYLRRPLWWIGLLLMVLGEILNFVALGFAPASLV   79 (300)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cccccchhhHHHhhHHHHHHHHHHhcchHHHHHHHHhhhHHHH
Confidence            568999999999999999999999999999998874 5666556779999999999999999999999999999999999


Q ss_pred             hchhhHHHHHHHHHHHHHhcCCCCccchhhHHHHhhhhheeeeecCCCCCCCCHHHHHHHhcChhHHHHHHHHHHHHHHH
Q 018191           83 TPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFIL  162 (359)
Q Consensus        83 ~Pl~a~~li~~~ila~~~L~e~l~~~~~~G~~li~~G~~liv~~a~~~~~~~s~~el~~~~~~~~fl~y~~~~~~~~~~l  162 (359)
                      ||++++++++|+++|+++||||++++|++|++++++|+++++.++|++++.+|++|+++++++|+|+.|+.+..++.+++
T Consensus        80 ~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~~~~~t~~~l~~~~~~~~fl~y~~~~~~~~~~L  159 (300)
T PF05653_consen   80 APLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKEEPIHTLDELIALLSQPGFLVYFILVLVLILIL  159 (300)
T ss_pred             HHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCCCCcCCHHHHHHHhcCcceehhHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999998888877777


Q ss_pred             HHhhcccCCCchhHHHHHHHHhhhhHHHHHHHHHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHHhccchhhhhh
Q 018191          163 IFHFAPRCGNTNALVFIGICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKESQMMLQ  242 (359)
Q Consensus       163 i~~~~~r~g~~~~~~y~~i~gl~g~~tvl~~K~v~~~l~~~~~g~~~~~~~~ty~~l~~~v~~~l~Q~~~ln~~~~~~~~  242 (359)
                      +++.+||+|++++++|.++||++|++|++++|+++..++.+++|+|||.+|.+|+++++++.|++.|++||||       
T Consensus       160 ~~~~~~r~g~~~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~g~~~f~~~~~y~l~~~~v~~~~~Q~~~LN~-------  232 (300)
T PF05653_consen  160 IFFIKPRYGRRNILVYISICSLIGSFTVLSAKAISILIKLTFSGDNQFTYPLTYLLLLVLVVTAVLQLYYLNK-------  232 (300)
T ss_pred             HHhhcchhcccceEEEEEEeccccchhhhHHHHHHHHHHHHhcCchhhhhhHHHHHHHHHHHHHHHHHHHHHH-------
Confidence            7888899999999999999999999999999999999999999999999999999999999999999999999       


Q ss_pred             hhhccCceeecchhHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHhhhhhcccCCCCC
Q 018191          243 ALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDFER  308 (359)
Q Consensus       243 AL~~~~~~~v~Pv~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~~~~~Gv~lLs~~~~~~~  308 (359)
                      ||++||+++++|+|||+||++++++|.++||||++++++++.++.+|+.+++.||++|+++||.++
T Consensus       233 aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii~GV~lL~~~~~~~~  298 (300)
T PF05653_consen  233 ALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIIIIGVFLLSSSKDKEI  298 (300)
T ss_pred             HHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHhhheeeccCchhc
Confidence            999999999999999999999999999999999999999999999999999999999999999875

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.24  E-value=1.7e-09  Score=103.57  Aligned_cols=254  Identities=15%  Similarity=0.165  Sum_probs=145.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhHHHhhhhcC-----------c----c-cCCcccccccchhH---HHHHHHHHHHHHHH
Q 018191           10 GFVLALLSSFFIGSSFIIKKKGLRRAAAASG-----------V----R-AGVGGFTYLLEPLW---WVGMAIMIVGEVAN   70 (359)
Q Consensus        10 Gv~LAl~ss~~~a~G~vlqk~~~~~~~~~~~-----------~----~-~g~~~~~~l~~p~W---~~G~~l~~~g~~~~   70 (359)
                      .+++.+.++++.+..+++.|+...++.....           +    + .+ ..++..++..|   ..+.........+.
T Consensus         2 ~~~~~~~aa~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (281)
T TIGR03340         2 ALTLVVFSALMHAGWNLMAKSHADKEPDFLWWALLAHSVLLTPYGLWYLAQ-VGWSRLPATFWLLLAISAVANMVYFLGL   80 (281)
T ss_pred             cHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhccc-CCCCCcchhhHHHHHHHHHHHHHHHHHH
Confidence            3578899999999999999976543221000           0    0 00 00111111122   12333345566788


Q ss_pred             HHHHhhchhhhhhchhhHHHHHHHHHHHHHhcCCCCccchhhHHHHhhhhheeeeecCCCCCCCCHHHHHHHhcChhHHH
Q 018191           71 FVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPITSVQEIWSLATQPAFLL  150 (359)
Q Consensus        71 ~~Al~~ap~slv~Pl~a~~li~~~ila~~~L~e~l~~~~~~G~~li~~G~~liv~~a~~~~~~~s~~el~~~~~~~~fl~  150 (359)
                      ..++...|.+.++|+...+.++..+++.+++|||+++++|+|+.++..|+.++...  +.+ ..+          +....
T Consensus        81 ~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~--~~~-~~~----------~~g~~  147 (281)
T TIGR03340        81 AQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLS--RFA-QHR----------RKAYA  147 (281)
T ss_pred             HHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcc--ccc-ccc----------hhHHH
Confidence            88999999999999999999999999999999999999999999999999977532  211 111          11111


Q ss_pred             HHHHHHHHHHHHHHh-hcccCCC-----chhHHHHHHHHhhhhHHHHHHHHHHHHHHHhhcCCcc-ccchHHHHHHHHHH
Q 018191          151 YVASVIVLVFILIFH-FAPRCGN-----TNALVFIGICSLMGSLSVMSVKALGTSLKLTFEGKNQ-LLYPDTWFFMLVVA  223 (359)
Q Consensus       151 y~~~~~~~~~~li~~-~~~r~g~-----~~~~~y~~i~gl~g~~tvl~~K~v~~~l~~~~~g~~~-~~~~~ty~~l~~~v  223 (359)
                      +...  ..++..++. ..+|..+     .....+..++.++++.-...    -. .  ..++... ...+..+.++....
T Consensus       148 ~~l~--aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~--~~~~~~~~~~~~~~~~~~~~~~  218 (281)
T TIGR03340       148 WALA--AALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLL----LY-L--KRHGRSMFPYARQILPSATLGG  218 (281)
T ss_pred             HHHH--HHHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHH----HH-H--HHhccchhhhHHHHHHHHHHHH
Confidence            2111  111111121 2222211     11111222222222111000    00 0  0111111 11222233333333


Q ss_pred             HHHHHHHHHhccchhhhhhhhhccCceeecchhHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHhhhhh
Q 018191          224 ICVIMQMNYLNKESQMMLQALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILL  300 (359)
Q Consensus       224 ~~~l~Q~~~ln~~~~~~~~AL~~~~~~~v~Pv~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~~~~~Gv~lL  300 (359)
                      .+...-....++       ++++.+++.+.+..|. .++++++.|.++++|..+  +    ....|.++++.|+++|
T Consensus       219 ~~s~l~~~l~~~-------al~~~~a~~~~~~~~l-~pv~a~l~g~~~lgE~~~--~----~~~iG~~lil~Gv~l~  281 (281)
T TIGR03340       219 LMIGGAYALVLW-------AMTRLPVATVVALRNT-SIVFAVVLGIWFLNERWY--L----TRLMGVCIIVAGLVVL  281 (281)
T ss_pred             HHHHHHHHHHHH-------HHhhCCceEEEeeccc-HHHHHHHHHHHHhCCCcc--H----HHHHHHHHHHHhHHhC
Confidence            333344456678       9999999999998876 589999999999999654  3    2456777788888764

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=99.16  E-value=1.3e-10  Score=99.81  Aligned_cols=117  Identities=18%  Similarity=0.190  Sum_probs=96.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhHHHhhhhcCcccCCcccccccch--hHHHHHHHHHHHHHHHHHHHhhchhhhhhchh
Q 018191            9 KGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEP--LWWVGMAIMIVGEVANFVAYAFAPAVLVTPLG   86 (359)
Q Consensus         9 iGv~LAl~ss~~~a~G~vlqk~~~~~~~~~~~~~~g~~~~~~l~~p--~W~~G~~l~~~g~~~~~~Al~~ap~slv~Pl~   86 (359)
                      +|.++.+.+.++.+.|+++.|+|..+.++.+.............+|  +-+.|++++++++..+..++...|++...|+.
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~~~~~~~~~~~~~~p~~~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~   81 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLPLLSHAWDFIAALLAFGLALRAVLLGLAGYALSMLCWLKALRYLPLSRAYPLL   81 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCCccchhHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHH
Confidence            4678889999999999999999988765331111000011234567  78899999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHH--HhcCCCCccchhhHHHHhhhhheeee
Q 018191           87 ALSIIVSAVLAHF--ILHEKLPQLGILGCVMCIAGSIIIVI  125 (359)
Q Consensus        87 a~~li~~~ila~~--~L~e~l~~~~~~G~~li~~G~~liv~  125 (359)
                      +..+++..+++..  ++||+++..+++|++++++|+.++..
T Consensus        82 sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~  122 (129)
T PRK02971         82 SLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINL  122 (129)
T ss_pred             HHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhcc
Confidence            9999888888885  89999999999999999999998753

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.99  E-value=1.5e-07  Score=91.07  Aligned_cols=262  Identities=16%  Similarity=0.246  Sum_probs=140.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhhHHHhhhhc--Cccc---CCcccccc---cch---hHHHHHHHHHHHHHHHHHHHhh-chh
Q 018191           12 VLALLSSFFIGSSFIIKKKGLRRAAAAS--GVRA---GVGGFTYL---LEP---LWWVGMAIMIVGEVANFVAYAF-APA   79 (359)
Q Consensus        12 ~LAl~ss~~~a~G~vlqk~~~~~~~~~~--~~~~---g~~~~~~l---~~p---~W~~G~~l~~~g~~~~~~Al~~-ap~   79 (359)
                      .+++.++++-+.....-|.+..+.+...  ..|-   +.......   +.+   ....|+........+.+.++.+ .|.
T Consensus         7 l~~l~~~~~Wg~~~~~~k~~~~~~~p~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a   86 (299)
T PRK11453          7 VLALLVVVVWGLNFVVIKVGLHNMPPLMLAGLRFMLVAFPAIFFVARPKVPLNLLLGYGLTISFGQFAFLFCAINFGMPA   86 (299)
T ss_pred             HHHHHHHHHHhhhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCH
Confidence            4567778888888888887654321100  0110   00000011   111   1112332223333455666666 577


Q ss_pred             hhhhchhhHHHHHHHHHHHHHhcCCCCccchhhHHHHhhhhheeeeecCCCCCCCCHHHHHHHhcChhHHHHHHHHHHH-
Q 018191           80 VLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPITSVQEIWSLATQPAFLLYVASVIVL-  158 (359)
Q Consensus        80 slv~Pl~a~~li~~~ila~~~L~e~l~~~~~~G~~li~~G~~liv~~a~~~~~~~s~~el~~~~~~~~fl~y~~~~~~~-  158 (359)
                      ....-+....-+++.+++++++|||+++++++|+++.++|+.++.... .++...+.         .+ ..+.....+. 
T Consensus        87 ~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~-~~~~~~~~---------~G-~~l~l~aal~~  155 (299)
T PRK11453         87 GLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDS-LNGQHVAM---------LG-FMLTLAAAFSW  155 (299)
T ss_pred             HHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhcccc-CCCcchhH---------HH-HHHHHHHHHHH
Confidence            788878888889999999999999999999999999999998876321 11111110         01 1111111111 


Q ss_pred             HHH--HHHhhcccCCCchhHHHHHHHHhhhhHHHHHHHHHHHHHHHhhcCCc------cccchHHHHH-HHHHHHHHHHH
Q 018191          159 VFI--LIFHFAPRCGNTNALVFIGICSLMGSLSVMSVKALGTSLKLTFEGKN------QLLYPDTWFF-MLVVAICVIMQ  229 (359)
Q Consensus       159 ~~~--li~~~~~r~g~~~~~~y~~i~gl~g~~tvl~~K~v~~~l~~~~~g~~------~~~~~~ty~~-l~~~v~~~l~Q  229 (359)
                      .+.  +.-+..++.+......+......++..-..   ..+.    ..++.+      ...++..|.. +...+.+...+
T Consensus       156 a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~  228 (299)
T PRK11453        156 ACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFF---VASL----ILDGSATMIHSLVTIDMTTILSLMYLAFVATIVG  228 (299)
T ss_pred             HHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHH---HHHH----HhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHH
Confidence            111  101111111111122222222222211100   0000    011111      1123333433 34445667777


Q ss_pred             HHHhccchhhhhhhhhccCceeecchhHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHhhhhhcccCC
Q 018191          230 MNYLNKESQMMLQALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKD  305 (359)
Q Consensus       230 ~~~ln~~~~~~~~AL~~~~~~~v~Pv~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~~~~~Gv~lLs~~~~  305 (359)
                      ....++       ++++.++..+.++ ....++++++.|.++++|...  +.    ..+|.+++++|+++....+.
T Consensus       229 ~~l~~~-------~l~~~~a~~~s~~-~~l~Pv~a~~~~~l~lgE~~~--~~----~~iG~~lI~~gv~l~~~~~~  290 (299)
T PRK11453        229 YGIWGT-------LLGRYETWRVAPL-SLLVPVVGLASAALLLDERLT--GL----QFLGAVLIMAGLYINVFGLR  290 (299)
T ss_pred             HHHHHH-------HHHhCCHHHHHHH-HHHHHHHHHHHHHHHhCCCcc--HH----HHHHHHHHHHHHHHHhcchh
Confidence            777888       9999998887775 458899999999999999643  33    45777888888887665443

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=98.96  E-value=3.1e-07  Score=90.73  Aligned_cols=274  Identities=17%  Similarity=0.249  Sum_probs=149.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhHH----Hhhh---------hc--CcccCC-cccccccchhHHHHH--HHHHHHHHH
Q 018191            8 LKGFVLALLSSFFIGSSFIIKKKGLR----RAAA---------AS--GVRAGV-GGFTYLLEPLWWVGM--AIMIVGEVA   69 (359)
Q Consensus         8 ~iGv~LAl~ss~~~a~G~vlqk~~~~----~~~~---------~~--~~~~g~-~~~~~l~~p~W~~G~--~l~~~g~~~   69 (359)
                      .+|=++|++-+.....+.-+.+++..    |.--         .+  --|.+. +..+.+++|+|.-=+  ++++.++..
T Consensus        16 ~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~aN~~   95 (334)
T PF06027_consen   16 LLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVEANYL   95 (334)
T ss_pred             HHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHHHHHHH
Confidence            35666777766666666666665322    1000         00  011111 122334555554332  344678889


Q ss_pred             HHHHHhhchhhhhhchhhHHHHHHHHHHHHHhcCCCCccchhhHHHHhhhhheeeeecCCCCCCC-CHHHHHHHhcChhH
Q 018191           70 NFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPIT-SVQEIWSLATQPAF  148 (359)
Q Consensus        70 ~~~Al~~ap~slv~Pl~a~~li~~~ila~~~L~e~l~~~~~~G~~li~~G~~liv~~a~~~~~~~-s~~el~~~~~~~~f  148 (359)
                      ...||.+-+.+-+|=|.+.+++++++++.++||||.++.+++|+++|++|+++++......++.. +.+       +| .
T Consensus        96 ~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~-------~~-i  167 (334)
T PF06027_consen   96 VVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGS-------NP-I  167 (334)
T ss_pred             HHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCC-------cc-c
Confidence            99999999999999999999999999999999999999999999999999998876642222111 100       01 0


Q ss_pred             HHHHHHHHHHHHHHHHh-hccc-CCCchhHHHHHHHHhhhhHHHHHHHHHHHHHHHhhcCCccc-cchHHHHHHHHHHHH
Q 018191          149 LLYVASVIVLVFILIFH-FAPR-CGNTNALVFIGICSLMGSLSVMSVKALGTSLKLTFEGKNQL-LYPDTWFFMLVVAIC  225 (359)
Q Consensus       149 l~y~~~~~~~~~~li~~-~~~r-~g~~~~~~y~~i~gl~g~~tvl~~K~v~~~l~~~~~g~~~~-~~~~ty~~l~~~v~~  225 (359)
                      +.=+.+....++..+.- ..++ -.+.+...+.+.-|++|.+-.. .....    ...++-..+ -++....+++....+
T Consensus       168 ~GDll~l~~a~lya~~nV~~E~~v~~~~~~~~lg~~Glfg~ii~~-iq~~i----le~~~i~~~~w~~~~~~~~v~~~~~  242 (334)
T PF06027_consen  168 LGDLLALLGAILYAVSNVLEEKLVKKAPRVEFLGMLGLFGFIISG-IQLAI----LERSGIESIHWTSQVIGLLVGYALC  242 (334)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHH-HHHHh----eehhhhhccCCChhhHHHHHHHHHH
Confidence            00011111111111111 1111 1122234444555555543111 11111    001121111 134444443333333


Q ss_pred             HHHHHHHhccchhhhhhhhhccCceeecchhHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHhhhhhcccCC
Q 018191          226 VIMQMNYLNKESQMMLQALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKD  305 (359)
Q Consensus       226 ~l~Q~~~ln~~~~~~~~AL~~~~~~~v~Pv~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~~~~~Gv~lLs~~~~  305 (359)
                      ...=-...+-       .++..+++.+.- ---.-..-+++.++.+|++..  ++    +...|+++++.|.++.+..+.
T Consensus       243 lf~~y~l~p~-------~l~~ssAt~~nL-sLLTsd~~ali~~i~~f~~~~--~~----ly~~af~lIiiG~vvy~~~~~  308 (334)
T PF06027_consen  243 LFLFYSLVPI-------VLRMSSATFFNL-SLLTSDFYALIIDIFFFGYKF--SW----LYILAFALIIIGFVVYNLAES  308 (334)
T ss_pred             HHHHHHHHHH-------HHHhCccceeeh-HHHHhhHHHHHHHHHhcCccc--cH----HHHHHHHHHHHHhheEEccCC
Confidence            2221122233       566677765433 333444558899999999843  33    467889999999999887765


Q ss_pred             CCC
Q 018191          306 FER  308 (359)
Q Consensus       306 ~~~  308 (359)
                      +++
T Consensus       309 ~~~  311 (334)
T PF06027_consen  309 PEE  311 (334)
T ss_pred             ccc
Confidence            543

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.84  E-value=2.2e-08  Score=83.82  Aligned_cols=103  Identities=18%  Similarity=0.281  Sum_probs=82.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhhHHHhhhhcCcccCCcccccccchhHHHHH--HHHHHHHHHHHHHHhhchhhhhhchhhHH
Q 018191           12 VLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGM--AIMIVGEVANFVAYAFAPAVLVTPLGALS   89 (359)
Q Consensus        12 ~LAl~ss~~~a~G~vlqk~~~~~~~~~~~~~~g~~~~~~l~~p~W~~G~--~l~~~g~~~~~~Al~~ap~slv~Pl~a~~   89 (359)
                      ++-+.|.++...|+++.|++.++.+.      +    .-..++.++.+.  ..+.+++.++..++...|++..+|+.+++
T Consensus         4 ~~l~~ai~~ev~g~~~lK~s~~~~~~------~----~~~~~~l~~~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~   73 (111)
T PRK15051          4 LTLVFASLLSVAGQLCQKQATRPVAI------G----KRRKHIVLWLGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLN   73 (111)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccCCc------c----hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHH
Confidence            34566778888999999997432211      0    001133445555  66788999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCCccchhhHHHHhhhhheee
Q 018191           90 IIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIV  124 (359)
Q Consensus        90 li~~~ila~~~L~e~l~~~~~~G~~li~~G~~liv  124 (359)
                      ++++.+++.+++|||++.++++|+.++++|++++.
T Consensus        74 ~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         74 FVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999998764

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.83  E-value=3.8e-07  Score=85.31  Aligned_cols=203  Identities=18%  Similarity=0.170  Sum_probs=120.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhhchhhhhhchhhHHHHHHHHHHHHHhcCCCCccchhhHHHHhhhhheeeeecCCCCCCCCH
Q 018191           57 WVGMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPITSV  136 (359)
Q Consensus        57 ~~G~~l~~~g~~~~~~Al~~ap~slv~Pl~a~~li~~~ila~~~L~e~l~~~~~~G~~li~~G~~liv~~a~~~~~~~s~  136 (359)
                      ..|.+...+...+.+.|+.+.|.+...++..+.-+++.+++.+++|||+++++++|+.+.++|+.++...+  +.+. + 
T Consensus        51 ~~~~~~~~l~~~~~~~a~~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~--~~~~-~-  126 (260)
T TIGR00950        51 LLGALQIGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDG--NLSI-N-  126 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCC--cccc-c-
Confidence            55666677888899999999999999999999999999999999999999999999999999999876432  1111 1 


Q ss_pred             HHHHHHhcChhHHHHHHHHHHHHHHHHH-hhccc----CCCchhHHHHHHHHhhhhHHHHHHHHHHHHHHHhhcCCcccc
Q 018191          137 QEIWSLATQPAFLLYVASVIVLVFILIF-HFAPR----CGNTNALVFIGICSLMGSLSVMSVKALGTSLKLTFEGKNQLL  211 (359)
Q Consensus       137 ~el~~~~~~~~fl~y~~~~~~~~~~li~-~~~~r----~g~~~~~~y~~i~gl~g~~tvl~~K~v~~~l~~~~~g~~~~~  211 (359)
                               ..-..+..+..+  +.-.+ ...++    .+......+. ....+++.- +..-       ....+.+...
T Consensus       127 ---------~~G~~~~l~a~~--~~a~~~~~~k~~~~~~~~~~~~~~~-~~~~~~~~~-l~~~-------~~~~~~~~~~  186 (260)
T TIGR00950       127 ---------PAGLLLGLGSGI--SFALGTVLYKRLVKKEGPELLQFTG-WVLLLGALL-LLPF-------AWFLGPNPQA  186 (260)
T ss_pred             ---------HHHHHHHHHHHH--HHHHHHHHHhHHhhcCCchHHHHHH-HHHHHHHHH-HHHH-------HHhcCCCCCc
Confidence                     101111111111  11111 11122    1111112221 111222111 1100       0112222222


Q ss_pred             chHHHHH-HHHHHHHHHHHHHHhccchhhhhhhhhccCceeecchhHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHH
Q 018191          212 YPDTWFF-MLVVAICVIMQMNYLNKESQMMLQALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGF  290 (359)
Q Consensus       212 ~~~ty~~-l~~~v~~~l~Q~~~ln~~~~~~~~AL~~~~~~~v~Pv~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~  290 (359)
                      ++..|.. +...+.+........++       |+++.+++.+..+.+ ..++.+++.+.++++|..  ++.    ...|.
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~-------a~~~~~~~~~s~~~~-~~pv~~~ll~~~~~~E~~--~~~----~~~G~  252 (260)
T TIGR00950       187 LSLQWGALLYLGLIGTALAYFLWNK-------GLTLVDPSAASILAL-AEPLVALLLGLLILGETL--SLP----QLIGG  252 (260)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHH-------HHhcCCchHHHHHHH-HHHHHHHHHHHHHhCCCC--CHH----HHHHH
Confidence            4555543 33333333334445578       999999888777655 789999999999999954  444    34566


Q ss_pred             HHHHHhh
Q 018191          291 VVVLSGT  297 (359)
Q Consensus       291 ~~~~~Gv  297 (359)
                      ++++.|+
T Consensus       253 ~li~~g~  259 (260)
T TIGR00950       253 ALIIAAV  259 (260)
T ss_pred             HHHHHhc
Confidence            6666664

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.77  E-value=7.1e-07  Score=86.22  Aligned_cols=120  Identities=18%  Similarity=0.111  Sum_probs=88.5

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhc--C---------------cccCC-cccccccchhH----HHHHH
Q 018191            4 SKDNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAAS--G---------------VRAGV-GGFTYLLEPLW----WVGMA   61 (359)
Q Consensus         4 ~~~~~iGv~LAl~ss~~~a~G~vlqk~~~~~~~~~~--~---------------~~~g~-~~~~~l~~p~W----~~G~~   61 (359)
                      |+++..|.++++.++++.+...+.-|... +.+...  -               .+.+. ..++..+++++    ..|..
T Consensus         3 ~~~~~~g~~~~l~a~~~wg~~~~~~k~~~-~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (296)
T PRK15430          3 AKQTRQGVLLALAAYFIWGIAPAYFKLIY-YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAV   81 (296)
T ss_pred             chhhhhHHHHHHHHHHHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHH
Confidence            45778999999999999998888887531 100000  0               00000 00011122332    25556


Q ss_pred             HHHHHHHHHHHHHhhchhhhhhchhhHHHHHHHHHHHHHhcCCCCccchhhHHHHhhhhheee
Q 018191           62 IMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIV  124 (359)
Q Consensus        62 l~~~g~~~~~~Al~~ap~slv~Pl~a~~li~~~ila~~~L~e~l~~~~~~G~~li~~G~~liv  124 (359)
                      ...+...+.+.++...|.+...-+....-++..+++.+++|||+++++|.|+++..+|+.++.
T Consensus        82 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~  144 (296)
T PRK15430         82 LIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL  144 (296)
T ss_pred             HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence            667788899999999999999999999999999999999999999999999999999999875

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.73  E-value=1.5e-06  Score=84.15  Aligned_cols=222  Identities=10%  Similarity=0.159  Sum_probs=138.5

Q ss_pred             chhHHHHHHH---HHHHHHHHHHHHhhchhhhhhchhh-HHHHHHHHHHHHHhcCCCCccc----hhhHHHHhhhhheee
Q 018191           53 EPLWWVGMAI---MIVGEVANFVAYAFAPAVLVTPLGA-LSIIVSAVLAHFILHEKLPQLG----ILGCVMCIAGSIIIV  124 (359)
Q Consensus        53 ~p~W~~G~~l---~~~g~~~~~~Al~~ap~slv~Pl~a-~~li~~~ila~~~L~e~l~~~~----~~G~~li~~G~~liv  124 (359)
                      ...|..|++.   ...|++..+.|.....+++-.|+.. ++++++.+.+.+++||+.++++    ++|++++++|+.++.
T Consensus        56 ~~~~~~g~l~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~  135 (290)
T TIGR00776        56 LSIFLVGLLSGAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTS  135 (290)
T ss_pred             cHHHHHHHHHHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEE
Confidence            3445557776   8899999999999999999999999 9999999999999999999999    999999999988876


Q ss_pred             eecCCCCCCCCHHHHHHHhcChhHHHHHHHHHHHHHHHHHhhccc---CCCchhHHHHHHHH-hhhhHHHHHHHHHHHHH
Q 018191          125 IHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPR---CGNTNALVFIGICS-LMGSLSVMSVKALGTSL  200 (359)
Q Consensus       125 ~~a~~~~~~~s~~el~~~~~~~~fl~y~~~~~~~~~~li~~~~~r---~g~~~~~~y~~i~g-l~g~~tvl~~K~v~~~l  200 (359)
                      ...+++.+.   ++..   ..+.-+.+..+..+.  ...+...+|   ++..... +.-..| .+++..... .-.    
T Consensus       136 ~~~~~~~~~---~~~~---~~~~Gi~~~l~sg~~--y~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~-~~~----  201 (290)
T TIGR00776       136 RSKDKSAGI---KSEF---NFKKGILLLLMSTIG--YLVYVVVAKAFGVDGLSVL-LPQAIGMVIGGIIFNL-GHI----  201 (290)
T ss_pred             ecccccccc---cccc---chhhHHHHHHHHHHH--HHHHHHHHHHcCCCcceeh-hHHHHHHHHHHHHHHH-HHh----
Confidence            553222110   0100   012223333222221  111112222   1111111 111222 223322221 110    


Q ss_pred             HHhhcCCccccchHHHHHHHHHHHHHHHHHHHhccchhhhhhhhhccCceeecchhHHHHHHHHHHHHHHHhcccCCCCH
Q 018191          201 KLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKESQMMLQALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTA  280 (359)
Q Consensus       201 ~~~~~g~~~~~~~~ty~~l~~~v~~~l~Q~~~ln~~~~~~~~AL~~~~~~~v~Pv~~v~~t~~~i~~G~i~f~E~~~~~~  280 (359)
                      +   .  ........|..++.++.. ..+..+...       ++++.......++.....++.+.+.|+.+++|..  ++
T Consensus       202 ~---~--~~~~~~~~~~~~~~Gi~~-~ia~~~y~~-------~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~--~~  266 (290)
T TIGR00776       202 L---A--KPLKKYAILLNILPGLMW-GIGNFFYLF-------SAQPKVGVATSFSLSQLGVIISTLGGILILGEKK--TK  266 (290)
T ss_pred             c---c--cchHHHHHHHHHHHHHHH-HHHHHHHHH-------HcccccchhhHHHHHHHHHHHHHHHHHHHhccCC--Cc
Confidence            0   1  112233334444455554 555544556       7774444455666667779999999999999976  46


Q ss_pred             HHHHHHHHHHHHHHHhhhhhccc
Q 018191          281 ASIISEICGFVVVLSGTILLHTT  303 (359)
Q Consensus       281 ~~~~~~~~G~~~~~~Gv~lLs~~  303 (359)
                      .++....+|+++++.|+++.+-.
T Consensus       267 ~~~~~~~iG~~lIi~~~~l~~~~  289 (290)
T TIGR00776       267 REMIAISVGIILIIIAANILGIG  289 (290)
T ss_pred             ceeehhHHHHHHHHHHHHHHhcc
Confidence            78889999999999999988654

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.73  E-value=3e-06  Score=84.60  Aligned_cols=218  Identities=11%  Similarity=0.172  Sum_probs=119.1

Q ss_pred             HHHHHHHHHhhchhhhhhchhhHHHHHHHHHHHHH------hcCCCCccchhhHHHHhhhhheeeeecCCCC------CC
Q 018191           66 GEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFI------LHEKLPQLGILGCVMCIAGSIIIVIHAPQES------PI  133 (359)
Q Consensus        66 g~~~~~~Al~~ap~slv~Pl~a~~li~~~ila~~~------L~e~l~~~~~~G~~li~~G~~liv~~a~~~~------~~  133 (359)
                      .+.+.+.++.+.|.+...=+..+.-++++++++++      +|||+++++++|++++.+|+.++........      ..
T Consensus        91 ~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~  170 (358)
T PLN00411         91 YVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPY  170 (358)
T ss_pred             HHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCccccccccccc
Confidence            33467889999999999999999999999999999      6999999999999999999987754322110      00


Q ss_pred             CCHHHHH--HHhcChhHHHHHHHH-HHHHHHHHH-hhcc----cCCCchhHHHHHHHHhhhhHHHHHHHHHHHHHHHhhc
Q 018191          134 TSVQEIW--SLATQPAFLLYVASV-IVLVFILIF-HFAP----RCGNTNALVFIGICSLMGSLSVMSVKALGTSLKLTFE  205 (359)
Q Consensus       134 ~s~~el~--~~~~~~~fl~y~~~~-~~~~~~li~-~~~~----r~g~~~~~~y~~i~gl~g~~tvl~~K~v~~~l~~~~~  205 (359)
                      .+..+..  ....+...+.-..+. ...++.-++ ...+    +++.  ...+.....++++.-...   .+.    ..+
T Consensus       171 ~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~--~~~~t~~~~~~~~~~~~~---~~l----~~~  241 (358)
T PLN00411        171 LNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPA--AFTVSFLYTVCVSIVTSM---IGL----VVE  241 (358)
T ss_pred             ccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc--HhHHHHHHHHHHHHHHHH---HHH----HHc
Confidence            0000000  000001111111111 111111111 1112    2222  112222222222221111   110    111


Q ss_pred             CC--c-cccch--HHHHHHHHHHHHHHHHHHHhccchhhhhhhhhccCceeecchhHHHHHHHHHHHHHHHhcccCCCCH
Q 018191          206 GK--N-QLLYP--DTWFFMLVVAICVIMQMNYLNKESQMMLQALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTA  280 (359)
Q Consensus       206 g~--~-~~~~~--~ty~~l~~~v~~~l~Q~~~ln~~~~~~~~AL~~~~~~~v~Pv~~v~~t~~~i~~G~i~f~E~~~~~~  280 (359)
                      +.  + ....|  ..+.++..++.+.+ -....|+       ++++.+++.+ .++.-..++++++.|.++++|...  +
T Consensus       242 ~~~~~~~~~~~~~~~~~i~y~~i~t~l-ay~lw~~-------~v~~~ga~~a-s~~~~L~PV~a~llg~l~LgE~lt--~  310 (358)
T PLN00411        242 KNNPSVWIIHFDITLITIVTMAIITSV-YYVIHSW-------TVRHKGPLYL-AIFKPLSILIAVVMGAIFLNDSLY--L  310 (358)
T ss_pred             cCCcccceeccchHHHHHHHHHHHHHH-HHHHHHH-------HHhccCchHH-HHHHhHHHHHHHHHHHHHhCCCCc--H
Confidence            11  1 11111  22222222233333 3345788       8988888774 455667899999999999999654  3


Q ss_pred             HHHHHHHHHHHHHHHhhhhhcccCCCC
Q 018191          281 ASIISEICGFVVVLSGTILLHTTKDFE  307 (359)
Q Consensus       281 ~~~~~~~~G~~~~~~Gv~lLs~~~~~~  307 (359)
                      .    .++|.++++.|+.+..+.+.+|
T Consensus       311 ~----~~iG~~LIl~Gv~l~~~~~~~~  333 (358)
T PLN00411        311 G----CLIGGILITLGFYAVMWGKANE  333 (358)
T ss_pred             H----HHHHHHHHHHHHHHHHhhhhhh
Confidence            3    4578888999999887665544

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.60  E-value=1.7e-05  Score=76.57  Aligned_cols=209  Identities=14%  Similarity=0.141  Sum_probs=111.4

Q ss_pred             HHHHHHHHHHHHhh----chhhhhhchhhHHHHHHHHHHHHHhcCCCCccchhhHHHHhhhhheeeeecCCCCCCCCHHH
Q 018191           63 MIVGEVANFVAYAF----APAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPITSVQE  138 (359)
Q Consensus        63 ~~~g~~~~~~Al~~----ap~slv~Pl~a~~li~~~ila~~~L~e~l~~~~~~G~~li~~G~~liv~~a~~~~~~~s~~e  138 (359)
                      +.....+.+.++.+    .|.....-+..+.-++..+++++++|||++++++.|+++..+|+.++....+.    .+.++
T Consensus        71 ~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~----~~~~~  146 (295)
T PRK11689         71 FVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNG----LSLAE  146 (295)
T ss_pred             HHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCcc----chhhh
Confidence            33344445555544    35555566778889999999999999999999999999999999987643211    11111


Q ss_pred             HHHHh-cChhHHHHHHHHHHHHHHHHH-hhcccCCC-chhHHHHHHHHhhhhHHHHHHHHHHHHHHHhhcCC-ccccchH
Q 018191          139 IWSLA-TQPAFLLYVASVIVLVFILIF-HFAPRCGN-TNALVFIGICSLMGSLSVMSVKALGTSLKLTFEGK-NQLLYPD  214 (359)
Q Consensus       139 l~~~~-~~~~fl~y~~~~~~~~~~li~-~~~~r~g~-~~~~~y~~i~gl~g~~tvl~~K~v~~~l~~~~~g~-~~~~~~~  214 (359)
                      .+... .++  ...........+...+ ...+|..+ .+...+...   .++.. +.   ...    ..++. ..-.++.
T Consensus       147 ~~~~~~~~~--~G~~~~l~aa~~~A~~~v~~k~~~~~~~~~~~~~~---~~~~~-l~---~~~----~~~~~~~~~~~~~  213 (295)
T PRK11689        147 LINNIASNP--LSYGLAFIGAFIWAAYCNVTRKYARGKNGITLFFI---LTALA-LW---IKY----FLSPQPAMVFSLP  213 (295)
T ss_pred             hhhccccCh--HHHHHHHHHHHHHHHHHHHHhhccCCCCchhHHHH---HHHHH-HH---HHH----HHhcCccccCCHH
Confidence            10000 011  1111111111111111 12233221 122221111   11111 10   000    01221 1122344


Q ss_pred             HHHHHHHHHHHHHHHHHHhccchhhhhhhhhccCceeecchhHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHH
Q 018191          215 TWFFMLVVAICVIMQMNYLNKESQMMLQALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVL  294 (359)
Q Consensus       215 ty~~l~~~v~~~l~Q~~~ln~~~~~~~~AL~~~~~~~v~Pv~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~~~~  294 (359)
                      .|..++....+...-..+.|+       ++++.+++.+.+. .-..++++++.|.++++|..+  +.    ..+|.++++
T Consensus       214 ~~~~l~~~~~~t~~~~~l~~~-------al~~~~a~~~s~~-~~l~Pv~a~i~~~~~lgE~~~--~~----~~iG~~lI~  279 (295)
T PRK11689        214 AIIKLLLAAAAMGFGYAAWNV-------GILHGNMTLLATA-SYFTPVLSAALAALLLSTPLS--FS----FWQGVAMVT  279 (295)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH-------HHHccCHHHHHHH-HHhHHHHHHHHHHHHhCCCCc--HH----HHHHHHHHH
Confidence            444433322233333455588       9999998876655 457899999999999999643  33    457777888


Q ss_pred             Hhhhhhcc
Q 018191          295 SGTILLHT  302 (359)
Q Consensus       295 ~Gv~lLs~  302 (359)
                      .|+++...
T Consensus       280 ~gv~~~~~  287 (295)
T PRK11689        280 AGSLLCWL  287 (295)
T ss_pred             HhHHHHhh
Confidence            88776543

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.60  E-value=3.2e-06  Score=81.44  Aligned_cols=211  Identities=11%  Similarity=0.073  Sum_probs=121.9

Q ss_pred             HHHHHHHHHHHHHHHHH-hhchhhhhhchhhHHHHHHHHHHHHHhcCCCCccchhhHHHHhhhhheeeeecCCCCCCCCH
Q 018191           58 VGMAIMIVGEVANFVAY-AFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPITSV  136 (359)
Q Consensus        58 ~G~~l~~~g~~~~~~Al-~~ap~slv~Pl~a~~li~~~ila~~~L~e~l~~~~~~G~~li~~G~~liv~~a~~~~~~~s~  136 (359)
                      .|......+..+...++ ...|.....-+..+.-++..+++.+ +|||+++++++|.++.++|+.++...  ++.+....
T Consensus        74 ~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~--~~~~~~~~  150 (292)
T PRK11272         74 IGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSG--GNLSGNPW  150 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcC--cccccchH
Confidence            45554455566667777 8888888889999999999999975 79999999999999999998876432  11111111


Q ss_pred             HHHHHHhcChhHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHhhhhHHHHHHHHHHHHHHHhhcC-CccccchHH
Q 018191          137 QEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIGICSLMGSLSVMSVKALGTSLKLTFEG-KNQLLYPDT  215 (359)
Q Consensus       137 ~el~~~~~~~~fl~y~~~~~~~~~~li~~~~~r~g~~~~~~y~~i~gl~g~~tvl~~K~v~~~l~~~~~g-~~~~~~~~t  215 (359)
                      .+           .+.......- .......+|..+++........-.+++.....   +..    ..++ .....++..
T Consensus       151 G~-----------l~~l~a~~~~-a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~~~~~~~~  211 (292)
T PRK11272        151 GA-----------ILILIASASW-AFGSVWSSRLPLPVGMMAGAAEMLAAGVVLLI---ASL----LSGERLTALPTLSG  211 (292)
T ss_pred             HH-----------HHHHHHHHHH-HHHHHHHHhcCCCcchHHHHHHHHHHHHHHHH---HHH----HcCCcccccCCHHH
Confidence            11           1111111100 01111233333222111111111222111110   110    0111 112234455


Q ss_pred             HHHHH-HHHHHHHHHHHHhccchhhhhhhhhccCceeecchhHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHH
Q 018191          216 WFFML-VVAICVIMQMNYLNKESQMMLQALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVL  294 (359)
Q Consensus       216 y~~l~-~~v~~~l~Q~~~ln~~~~~~~~AL~~~~~~~v~Pv~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~~~~  294 (359)
                      |..++ ..+.+...-....++       ++++.+++.+..+ ....++.+.+.|.++++|..  ++.    ...|.++++
T Consensus       212 ~~~i~~l~i~~s~~~~~l~~~-------~~~~~~~~~~s~~-~~l~Pi~a~i~~~~~l~E~~--t~~----~iiG~~lIi  277 (292)
T PRK11272        212 FLALGYLAVFGSIIAISAYMY-------LLRNVRPALATSY-AYVNPVVAVLLGTGLGGETL--SPI----EWLALGVIV  277 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH-------HHhhcCHHHHHHH-HHHHHHHHHHHHHHHcCCCC--cHH----HHHHHHHHH
Confidence            54333 333344455566678       8888888776655 66789999999999999963  333    457888899


Q ss_pred             HhhhhhcccC
Q 018191          295 SGTILLHTTK  304 (359)
Q Consensus       295 ~Gv~lLs~~~  304 (359)
                      .|+++++.++
T Consensus       278 ~gv~~~~~~~  287 (292)
T PRK11272        278 FAVVLVTLGK  287 (292)
T ss_pred             HHHHHHHHHH
Confidence            9999887653

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.52  E-value=5.7e-06  Score=79.85  Aligned_cols=66  Identities=20%  Similarity=0.295  Sum_probs=59.8

Q ss_pred             HHHHHHHHHHHHHHHHHHhhchhhhhhchhhHHHHHHHHHHHHHhcCCCCccchhhHHHHhhhhhee
Q 018191           57 WVGMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIII  123 (359)
Q Consensus        57 ~~G~~l~~~g~~~~~~Al~~ap~slv~Pl~a~~li~~~ila~~~L~e~l~~~~~~G~~li~~G~~li  123 (359)
                      ..|+. +.+...++..++.+.+.+..+=+.+++.+++++++++++|||++++++.|.+++++|+.+.
T Consensus        70 ~~g~~-~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~  135 (302)
T TIGR00817        70 PVAIV-HTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALA  135 (302)
T ss_pred             HHHHH-HHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhh
Confidence            35555 4677789999999999999999999999999999999999999999999999999999864

specificities overlap.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.52  E-value=6.2e-05  Score=70.40  Aligned_cols=211  Identities=18%  Similarity=0.262  Sum_probs=122.6

Q ss_pred             HHHHHHHHHHHHHHHHHhhchhhhhhchhhHHHHHHHHHHH-HHhcCCCCccchhhHHHHhhhhheeeeecCCCCCCCCH
Q 018191           58 VGMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAH-FILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPITSV  136 (359)
Q Consensus        58 ~G~~l~~~g~~~~~~Al~~ap~slv~Pl~a~~li~~~ila~-~~L~e~l~~~~~~G~~li~~G~~liv~~a~~~~~~~s~  136 (359)
                      .|......+..+.+.++...|....+++...+.++..+++. +++|||+++++|.|..+...|+.++......+.+..  
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~--  152 (292)
T COG0697          75 LALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILS--  152 (292)
T ss_pred             HHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHH--
Confidence            45555567888999999999999999999999999999997 777999999999999999999998865443322210  


Q ss_pred             HHHHHHhcChhHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHH-HHHhhhhHHHHHHHHHHHHHHHhhcCCccccchHH
Q 018191          137 QEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIG-ICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDT  215 (359)
Q Consensus       137 ~el~~~~~~~~fl~y~~~~~~~~~~li~~~~~r~g~~~~~~y~~-i~gl~g~~tvl~~K~v~~~l~~~~~g~~~~~~~~t  215 (359)
                               ..-..+....... ..+.....++..+........ .... +...      ...  .......+....+..
T Consensus       153 ---------~~g~~~~l~a~~~-~a~~~~~~~~~~~~~~~~~~~~~~~~-~~~~------~~~--~~~~~~~~~~~~~~~  213 (292)
T COG0697         153 ---------LLGLLLALAAALL-WALYTALVKRLSRLGPVTLALLLQLL-LALL------LLL--LFFLSGFGAPILSRA  213 (292)
T ss_pred             ---------HHHHHHHHHHHHH-HHHHHHHHHHhcCCChHHHHHHHHHH-HHHH------HHH--HHHhccccccCCHHH
Confidence                     1111111111111 011111122211111111111 1111 0000      000  001111122223333


Q ss_pred             HHHHH-HHHHHHHHHHHHhccchhhhhhhhhccCceeecchhHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHH
Q 018191          216 WFFML-VVAICVIMQMNYLNKESQMMLQALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVL  294 (359)
Q Consensus       216 y~~l~-~~v~~~l~Q~~~ln~~~~~~~~AL~~~~~~~v~Pv~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~~~~  294 (359)
                      |..+. .++.+...-....++       ++++.+++.+.|.. ...++.+++.+.++++|.-+  ..    ...|.++++
T Consensus       214 ~~~~~~~g~~~~~i~~~~~~~-------~~~~~~~~~~~~~~-~~~~v~~~~~~~l~~~e~~~--~~----~~~G~~li~  279 (292)
T COG0697         214 WLLLLYLGVFSTGLAYLLWYY-------ALRLLGASLVALLS-LLEPVFAALLGVLLLGEPLS--PA----QLLGAALVV  279 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH-------HHHhcCchHHHHHH-HHHHHHHHHHHHHHhCCCCc--HH----HHHHHHHHH
Confidence            33332 223333233455578       99999998877766 66777788899999999643  33    345557888


Q ss_pred             Hhhhhhccc
Q 018191          295 SGTILLHTT  303 (359)
Q Consensus       295 ~Gv~lLs~~  303 (359)
                      .|+++...+
T Consensus       280 ~g~~l~~~~  288 (292)
T COG0697         280 LGVLLASLR  288 (292)
T ss_pred             HHHHHHhcc
Confidence            888887765

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.49  E-value=4.4e-05  Score=73.65  Aligned_cols=256  Identities=13%  Similarity=0.103  Sum_probs=139.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhc--Cccc--CC--------cccccccchhH----HHHHHHHHHHHHH
Q 018191            6 DNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAAS--GVRA--GV--------GGFTYLLEPLW----WVGMAIMIVGEVA   69 (359)
Q Consensus         6 ~~~iGv~LAl~ss~~~a~G~vlqk~~~~~~~~~~--~~~~--g~--------~~~~~l~~p~W----~~G~~l~~~g~~~   69 (359)
                      |...|+.+.+++.++.+.+.++-|.+....+...  ..|-  +.        ..+.-.+++.|    +.|.. +.....+
T Consensus         9 ~~~~~~~~~~la~~~~~~~~~~~K~~~~~~~~~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~   87 (293)
T PRK10532          9 PVWLPILLLLIAMASIQSGASLAKSLFPLVGAPGVTALRLALGTLILIAIFKPWRLRFAKEQRLPLLFYGVS-LGGMNYL   87 (293)
T ss_pred             ccchHHHHHHHHHHHHHhhHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhHHhccCCHHHHHHHHHHHHH-HHHHHHH
Confidence            4467899999999999999999998765321110  0000  00        00001122222    45543 4566677


Q ss_pred             HHHHHhhchhhhhhchhhHHHHHHHHHHHHHhcCCCCccchhhHHHHhhhhheeeeecCCCCCCCCHHHHHHHhcChhHH
Q 018191           70 NFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPITSVQEIWSLATQPAFL  149 (359)
Q Consensus        70 ~~~Al~~ap~slv~Pl~a~~li~~~ila~~~L~e~l~~~~~~G~~li~~G~~liv~~a~~~~~~~s~~el~~~~~~~~fl  149 (359)
                      .+.++...|.+...-+....-++..++++    |+.+  ++.+..+.++|+.+++..+...+ ..+          +.-.
T Consensus        88 ~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~--~~~~~~i~~~Gv~li~~~~~~~~-~~~----------~~G~  150 (293)
T PRK10532         88 FYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPV--DFVWVVLAVLGLWFLLPLGQDVS-HVD----------LTGA  150 (293)
T ss_pred             HHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChH--HHHHHHHHHHHHheeeecCCCcc-cCC----------hHHH
Confidence            88899999999877666666677666653    5543  45667778889887764332111 111          1001


Q ss_pred             HHHHHHHHHHHHHHHh-hcccCCCc-hhHHHHHHHHhhhhHHHHHHHHHHHHHHHhhcCCccccchHHHHH-HHHHHHHH
Q 018191          150 LYVASVIVLVFILIFH-FAPRCGNT-NALVFIGICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFF-MLVVAICV  226 (359)
Q Consensus       150 ~y~~~~~~~~~~li~~-~~~r~g~~-~~~~y~~i~gl~g~~tvl~~K~v~~~l~~~~~g~~~~~~~~ty~~-l~~~v~~~  226 (359)
                      .+.  ....++..++. ..++..++ ..... ....++++.- +.  .+.     ...+.....++..|.. +..++.+.
T Consensus       151 ll~--l~aa~~~a~~~v~~r~~~~~~~~~~~-~~~~~~~~~~-l~--~~~-----~~~~~~~~~~~~~~~~~l~lgv~~t  219 (293)
T PRK10532        151 ALA--LGAGACWAIYILSGQRAGAEHGPATV-AIGSLIAALI-FV--PIG-----ALQAGEALWHWSILPLGLAVAILST  219 (293)
T ss_pred             HHH--HHHHHHHHHHHHHHHHHhccCCchHH-HHHHHHHHHH-HH--HHH-----HHccCcccCCHHHHHHHHHHHHHHH
Confidence            111  11111111111 11221111 11111 1222333211 11  011     0111122235555543 34556677


Q ss_pred             HHHHHHhccchhhhhhhhhccCceeecchhHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHhhhhhcccC
Q 018191          227 IMQMNYLNKESQMMLQALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTK  304 (359)
Q Consensus       227 l~Q~~~ln~~~~~~~~AL~~~~~~~v~Pv~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~~~~~Gv~lLs~~~  304 (359)
                      ..+....|+       ++++.+++.+.+. ....++++++.|.++|+|..  ++.    ...|.+++++|++...+.+
T Consensus       220 ~~~~~l~~~-------~~~~~~a~~as~~-~~l~Pv~a~l~~~l~lgE~~--~~~----~~iG~~lIl~~~~~~~~~~  283 (293)
T PRK10532        220 ALPYSLEMI-------ALTRLPTRTFGTL-MSMEPALAAVSGMIFLGETL--TLI----QWLALGAIIAASMGSTLTI  283 (293)
T ss_pred             HHHHHHHHH-------HHHhcChhHHHHH-HHhHHHHHHHHHHHHhCCCC--cHH----HHHHHHHHHHHHHHHHhcC
Confidence            777778899       9999999886664 56899999999999999964  344    4466667777777776554

>COG2510 Predicted membrane protein [Function unknown]

Probab=98.48  E-value=6.9e-07  Score=76.22  Aligned_cols=113  Identities=26%  Similarity=0.351  Sum_probs=83.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhHHHhhhhc--Cccc--------------CC-cccccccchhH----HHHHHHHHHHHHH
Q 018191           11 FVLALLSSFFIGSSFIIKKKGLRRAAAAS--GVRA--------------GV-GGFTYLLEPLW----WVGMAIMIVGEVA   69 (359)
Q Consensus        11 v~LAl~ss~~~a~G~vlqk~~~~~~~~~~--~~~~--------------g~-~~~~~l~~p~W----~~G~~l~~~g~~~   69 (359)
                      .+.|+.|+++.++..++-|-|.+......  -.|.              |. ....-...+.|    ..| +.-+++-++
T Consensus         5 ~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSG-la~glswl~   83 (140)
T COG2510           5 IIYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSG-LAGGLSWLL   83 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHH-HHHHHHHHH
Confidence            56789999999999999999976322110  0000              00 00001122222    123 444566778


Q ss_pred             HHHHHhhchhhhhhchhhHHHHHHHHHHHHHhcCCCCccchhhHHHHhhhhheee
Q 018191           70 NFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIV  124 (359)
Q Consensus        70 ~~~Al~~ap~slv~Pl~a~~li~~~ila~~~L~e~l~~~~~~G~~li~~G~~liv  124 (359)
                      .|.|+.-+++|.|.|+-..+.++..+++..+||||++...|+|+.++++|++++.
T Consensus        84 Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          84 YFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            8999999999999999999999999999999999999999999999999998774

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=98.37  E-value=4.2e-07  Score=76.30  Aligned_cols=104  Identities=19%  Similarity=0.245  Sum_probs=81.5

Q ss_pred             HHHHHHHHHhhHHHhhhhcCc-ccCCcccccccchhHHHHHHHHHHHHHHHHHHHhhchhhhhhchh-hHHHHHHHHHHH
Q 018191           21 IGSSFIIKKKGLRRAAAASGV-RAGVGGFTYLLEPLWWVGMAIMIVGEVANFVAYAFAPAVLVTPLG-ALSIIVSAVLAH   98 (359)
Q Consensus        21 ~a~G~vlqk~~~~~~~~~~~~-~~g~~~~~~l~~p~W~~G~~l~~~g~~~~~~Al~~ap~slv~Pl~-a~~li~~~ila~   98 (359)
                      -+...-+-|||.+..+..... +.-.+....++||.+++++++...|.+..+..++-+|+|+..|+. +++++++++.++
T Consensus         8 WG~Tnpfik~g~~~~~~~~~~~~~~~~~~~Ll~n~~y~ipf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~   87 (113)
T PF10639_consen    8 WGCTNPFIKRGSSGLEKVKASLQLLQEIKFLLLNPKYIIPFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGW   87 (113)
T ss_pred             hcCchHHHHHHHhhcCCccchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHH
Confidence            344455677776543322111 001134468899999999999999999999999999999999996 999999999997


Q ss_pred             HHhcCCCCccchhhHHHHhhhhheee
Q 018191           99 FILHEKLPQLGILGCVMCIAGSIIIV  124 (359)
Q Consensus        99 ~~L~e~l~~~~~~G~~li~~G~~liv  124 (359)
                      ++-+|..+++.++|+.+++.|+.+.+
T Consensus        88 ~lge~~~~~~~~~G~~Li~~Gv~Lcv  113 (113)
T PF10639_consen   88 LLGEEVISRRTWLGMALILAGVALCV  113 (113)
T ss_pred             HhcCcccchhHHHHHHHHHcCeeeeC
Confidence            77777778888999999999998753

Many members are annotated as potential transmembrane proteins.

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.29  E-value=5.1e-06  Score=69.10  Aligned_cols=68  Identities=28%  Similarity=0.408  Sum_probs=61.0

Q ss_pred             HHHHHHHHHHHHHHHHhhchhhhhhchhhHHHHHHHHHHHHHhcCCCCccchhhHHHHhhhhheeeeec
Q 018191           59 GMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHA  127 (359)
Q Consensus        59 G~~l~~~g~~~~~~Al~~ap~slv~Pl~a~~li~~~ila~~~L~e~l~~~~~~G~~li~~G~~liv~~a  127 (359)
                      |.+...++..+.+.|+.++| ..+.|+.+++.+++.+++.+++|||+++++|.|++++.+|++++....
T Consensus        41 g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~  108 (113)
T PF13536_consen   41 GLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSD  108 (113)
T ss_pred             HHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhh
Confidence            44455578899999999999 589999999999999999999999999999999999999999886543

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=98.21  E-value=9.1e-05  Score=71.16  Aligned_cols=213  Identities=15%  Similarity=0.280  Sum_probs=129.2

Q ss_pred             hhHHHHHHH---HHHHHHHHHHHHhhchhhhhhchh-hHHHHHHHHHHHHHhcCCCCccchh----hHHHHhhhhheeee
Q 018191           54 PLWWVGMAI---MIVGEVANFVAYAFAPAVLVTPLG-ALSIIVSAVLAHFILHEKLPQLGIL----GCVMCIAGSIIIVI  125 (359)
Q Consensus        54 p~W~~G~~l---~~~g~~~~~~Al~~ap~slv~Pl~-a~~li~~~ila~~~L~e~l~~~~~~----G~~li~~G~~liv~  125 (359)
                      ..|+.+++.   -.+|++.|+.++.....|...|+. +++++.|.+.+.++++|--+..+++    +.+++++|+.+...
T Consensus        43 ~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~  122 (269)
T PF06800_consen   43 TSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSY  122 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcc
Confidence            556666643   458999999999999999999998 8999999999999999998887764    88899999998877


Q ss_pred             ecCCCCCCCCHHHHHHHhcChhHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHhhhhHHHHHHHHHHHHHHH---
Q 018191          126 HAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIGICSLMGSLSVMSVKALGTSLKL---  202 (359)
Q Consensus       126 ~a~~~~~~~s~~el~~~~~~~~fl~y~~~~~~~~~~li~~~~~r~g~~~~~~y~~i~gl~g~~tvl~~K~v~~~l~~---  202 (359)
                      ...++++..+..+..+     . +...  .+..+....|...||..+-+.            .+.++-.+++..+-.   
T Consensus       123 ~~~~~~~~~~~~~~~k-----g-i~~L--l~stigy~~Y~~~~~~~~~~~------------~~~~lPqaiGm~i~a~i~  182 (269)
T PF06800_consen  123 QDKKSDKSSSKSNMKK-----G-ILAL--LISTIGYWIYSVIPKAFHVSG------------WSAFLPQAIGMLIGAFIF  182 (269)
T ss_pred             ccccccccccccchhh-----H-HHHH--HHHHHHHHHHHHHHHhcCCCh------------hHhHHHHHHHHHHHHHHH
Confidence            6655554333222221     1 1111  111122233444455533221            122222222211110   


Q ss_pred             -hhcCCccccchHHHHHHHHHHHHHHHHH-HHhccchhhhhhhhhccCceeecchhHHHHHHHHHHHHHHHhcccCCCCH
Q 018191          203 -TFEGKNQLLYPDTWFFMLVVAICVIMQM-NYLNKESQMMLQALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTA  280 (359)
Q Consensus       203 -~~~g~~~~~~~~ty~~l~~~v~~~l~Q~-~~ln~~~~~~~~AL~~~~~~~v~Pv~~v~~t~~~i~~G~i~f~E~~~~~~  280 (359)
                       .+. ++++.+-.+|.=++.++.-.+.=+ +++         +-+.--.+.-.|+-|.. .+.+.+.|+.+|+|.+  +.
T Consensus       183 ~~~~-~~~~~~k~~~~nil~G~~w~ignl~~~i---------s~~~~G~a~af~lSQ~~-vvIStlgGI~il~E~K--t~  249 (269)
T PF06800_consen  183 NLFS-KKPFFEKKSWKNILTGLIWGIGNLFYLI---------SAQKNGVATAFTLSQLG-VVISTLGGIFILKEKK--TK  249 (269)
T ss_pred             hhcc-cccccccchHHhhHHHHHHHHHHHHHHH---------hHHhccchhhhhHHhHH-HHHHHhhhheEEEecC--ch
Confidence             011 233334444444444432222211 222         22223344556676766 6678899999999986  45


Q ss_pred             HHHHHHHHHHHHHHHhhhh
Q 018191          281 ASIISEICGFVVVLSGTIL  299 (359)
Q Consensus       281 ~~~~~~~~G~~~~~~Gv~l  299 (359)
                      .++....+|+++++.|.++
T Consensus       250 ke~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  250 KEMIYTLIGLILIVIGAIL  268 (269)
T ss_pred             hhHHHHHHHHHHHHHhhhc
Confidence            6888999999999988775

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.18  E-value=0.00026  Score=70.32  Aligned_cols=59  Identities=12%  Similarity=0.196  Sum_probs=54.9

Q ss_pred             HHHHHHHHHhhchhhhhhchhhHHHHHHHHHHHHHhcCCCCccchhhHHHHhhhhheee
Q 018191           66 GEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIV  124 (359)
Q Consensus        66 g~~~~~~Al~~ap~slv~Pl~a~~li~~~ila~~~L~e~l~~~~~~G~~li~~G~~liv  124 (359)
                      +..+...++.+.+.+..+=+-+++-+++++++++++|||++++.+++++++++|+.+..
T Consensus       127 ~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~  185 (350)
T PTZ00343        127 VHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALAS  185 (350)
T ss_pred             HHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHhee
Confidence            34556699999999999999999999999999999999999999999999999999875

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=98.15  E-value=0.00051  Score=66.64  Aligned_cols=218  Identities=16%  Similarity=0.259  Sum_probs=126.9

Q ss_pred             HHHHHHHHHHHHHHHhhchhhhhhchhhHHHHHHHHHHHHHhcCCCCccchhhHHHHhhhhheeeeecCCCCCCCCHHHH
Q 018191           60 MAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPITSVQEI  139 (359)
Q Consensus        60 ~~l~~~g~~~~~~Al~~ap~slv~Pl~a~~li~~~ila~~~L~e~l~~~~~~G~~li~~G~~liv~~a~~~~~~~s~~el  139 (359)
                      -+++.++..++-.|+.+.|...-+=+-+..++++++++.+++|+|.+++++++++++++|+++......++++..+.++.
T Consensus        71 ~~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~  150 (303)
T PF08449_consen   71 SFLFFLASVLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSF  150 (303)
T ss_pred             HHHHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccc
Confidence            35666777888899999999999999999999999999999999999999999999999999988776544333221100


Q ss_pred             HHHhcChhHHHHHHHHHHHHH--HH-HH--hhcccCCC--chhHHHHHHHHhhhhHHHHHH-HHHHHHHHHhhcCCcccc
Q 018191          140 WSLATQPAFLLYVASVIVLVF--IL-IF--HFAPRCGN--TNALVFIGICSLMGSLSVMSV-KALGTSLKLTFEGKNQLL  211 (359)
Q Consensus       140 ~~~~~~~~fl~y~~~~~~~~~--~l-i~--~~~~r~g~--~~~~~y~~i~gl~g~~tvl~~-K~v~~~l~~~~~g~~~~~  211 (359)
                           ++. ..++.+....++  +. .+  +..++++.  ...+.|.-.-++......+.. + -++ .....  .-...
T Consensus       151 -----~~~-~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~-~~~-~~~~~--~f~~~  220 (303)
T PF08449_consen  151 -----SSA-LGIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLP-TGE-FRSAI--RFISA  220 (303)
T ss_pred             -----cch-hHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHH-hhH-hhHHH--HHHHH
Confidence                 000 011111111111  10 00  11223332  234444444333222111111 1 111 11000  11235


Q ss_pred             chHHHHHHHHHHHHHHHHHHHhccchhhhhhhhhccCceeecchhHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHH
Q 018191          212 YPDTWFFMLVVAICVIMQMNYLNKESQMMLQALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFV  291 (359)
Q Consensus       212 ~~~ty~~l~~~v~~~l~Q~~~ln~~~~~~~~AL~~~~~~~v~Pv~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~  291 (359)
                      ||..+..++....+...-+.+.+.       -.++++++...=+ ...=...+++.+.++|++  +.++.++.    |.+
T Consensus       221 ~p~~~~~l~~~s~~~~~g~~~i~~-------~~~~~~al~~t~v-~t~Rk~~sillS~~~f~~--~~~~~~~~----G~~  286 (303)
T PF08449_consen  221 HPSVLLYLLLFSLTGALGQFFIFY-------LIKKFSALTTTIV-TTLRKFLSILLSVIIFGH--PLSPLQWI----GIV  286 (303)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHH-------HHHhcCchhhhhH-HHHHHHHHHHHHHHhcCC--cCChHHHH----HHH
Confidence            777666665555543333445566       6777777664433 344467789999999986  56666664    445


Q ss_pred             HHHHhhhhhc
Q 018191          292 VVLSGTILLH  301 (359)
Q Consensus       292 ~~~~Gv~lLs  301 (359)
                      +++.|+.+=+
T Consensus       287 lv~~g~~~~~  296 (303)
T PF08449_consen  287 LVFAGIFLYS  296 (303)
T ss_pred             HhHHHHHHHH
Confidence            5666666543

; GO: 0055085 transmembrane transport

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=98.11  E-value=2.6e-05  Score=65.29  Aligned_cols=97  Identities=12%  Similarity=0.081  Sum_probs=77.6

Q ss_pred             HHHHHHHHHHHHHHHhhHHHhhhhcCcccCCcccccccchhH-HHHHHHHHHHHHHHHHHHhhchhhhhhch-hhHHHHH
Q 018191           15 LLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLW-WVGMAIMIVGEVANFVAYAFAPAVLVTPL-GALSIIV   92 (359)
Q Consensus        15 l~ss~~~a~G~vlqk~~~~~~~~~~~~~~g~~~~~~l~~p~W-~~G~~l~~~g~~~~~~Al~~ap~slv~Pl-~a~~li~   92 (359)
                      +.+.++...|....|++.       +          +++|.| +..++++++++.+...|+...|+++..|+ .+++.+.
T Consensus         8 ~~a~~~Ev~~~~~lK~s~-------g----------f~~~~~~i~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~   70 (110)
T PRK09541          8 GGAILAEVIGTTLMKFSE-------G----------FTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVL   70 (110)
T ss_pred             HHHHHHHHHHHHHHHHhc-------C----------CCchhHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHH
Confidence            345666666776666641       0          234554 45667778888888999999999999999 6799999


Q ss_pred             HHHHHHHHhcCCCCccchhhHHHHhhhhheeeeecC
Q 018191           93 SAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAP  128 (359)
Q Consensus        93 ~~ila~~~L~e~l~~~~~~G~~li~~G~~liv~~a~  128 (359)
                      +.+.+.+++||+++..+++|..++++|++++-..++
T Consensus        71 ~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~~  106 (110)
T PRK09541         71 ISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLSR  106 (110)
T ss_pred             HHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCCC
Confidence            999999999999999999999999999998855443

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=98.10  E-value=3.8e-05  Score=65.29  Aligned_cols=75  Identities=13%  Similarity=0.191  Sum_probs=67.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhchhhhhhch-hhHHHHHHHHHHHHHhcCCCCccchhhHHHHhhhhheeeeecCC
Q 018191           55 LWWVGMAIMIVGEVANFVAYAFAPAVLVTPL-GALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQ  129 (359)
Q Consensus        55 ~W~~G~~l~~~g~~~~~~Al~~ap~slv~Pl-~a~~li~~~ila~~~L~e~l~~~~~~G~~li~~G~~liv~~a~~  129 (359)
                      .|+..++++++++.+...++...|+++..|+ .+++.+...+.+.+++||+++..+++|+.++++|++.+-..+++
T Consensus        32 ~~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~~~  107 (120)
T PRK10452         32 GFILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGTRK  107 (120)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCCCC
Confidence            3577788888999999999999999999999 57999999999999999999999999999999999988555543

>PRK13499 rhamnose-proton symporter; Provisional

Probab=98.09  E-value=0.00011  Score=72.94  Aligned_cols=287  Identities=12%  Similarity=0.111  Sum_probs=153.0

Q ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHHHhhHHHhh--------------------hhcCcccCCccccccc---chhHHHH
Q 018191            3 FSKDNLKGFVLALLSSFFIGSSFIIKKKGLRRAA--------------------AASGVRAGVGGFTYLL---EPLWWVG   59 (359)
Q Consensus         3 ~~~~~~iGv~LAl~ss~~~a~G~vlqk~~~~~~~--------------------~~~~~~~g~~~~~~l~---~p~W~~G   59 (359)
                      |..+..+|++..+++.++.+.=.+-+||. +.=+                    ..-..+   ....+++   ...|..+
T Consensus         1 m~~~~~~G~~~~~i~~~~~GS~~~p~K~~-k~w~wE~~W~v~gi~~wl~~~~~~g~~~~~---~f~~~~~~~~~~~~~~~   76 (345)
T PRK13499          1 MSNAIILGIIWHLIGGASSGSFYAPFKKV-KKWSWETMWSVGGIFSWLILPWLIAALLLP---DFWAYYSSFSGSTLLPV   76 (345)
T ss_pred             CCchhHHHHHHHHHHHHHhhccccccccc-CCCchhHHHHHHHHHHHHHHHHHHHHHHhh---hHHHHHHhcCHHHHHHH
Confidence            56788999999999999999999989882 2100                    000111   1122222   3455555


Q ss_pred             H---HHHHHHHHHHHHHHhhchhhhhhchh-hHHHHHHHHHHHHHhcCCC---Ccc----chhhHHHHhhhhheeeeecC
Q 018191           60 M---AIMIVGEVANFVAYAFAPAVLVTPLG-ALSIIVSAVLAHFILHEKL---PQL----GILGCVMCIAGSIIIVIHAP  128 (359)
Q Consensus        60 ~---~l~~~g~~~~~~Al~~ap~slv~Pl~-a~~li~~~ila~~~L~e~l---~~~----~~~G~~li~~G~~liv~~a~  128 (359)
                      +   ++-.+|++.++.+..+...|+-.|+. +++++.+.++..++++|=-   +..    ..+|++++++|+++....+.
T Consensus        77 ~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~  156 (345)
T PRK13499         77 FLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQ  156 (345)
T ss_pred             HHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhh
Confidence            5   34468999999999999999999996 6889999999999998643   333    35799999999998877543


Q ss_pred             CCCCCCCHHHHHHHhcChhHHHHHHHHHHHHHHHHHhh-----cc----cCCCchhHHHHH---HHH-hhhhHHHHHHHH
Q 018191          129 QESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHF-----AP----RCGNTNALVFIG---ICS-LMGSLSVMSVKA  195 (359)
Q Consensus       129 ~~~~~~s~~el~~~~~~~~fl~y~~~~~~~~~~li~~~-----~~----r~g~~~~~~y~~---i~g-l~g~~tvl~~K~  195 (359)
                      ..++..+.+|-.+. ....-+..+++..+......+..     -+    ..|. +. .|..   .++ ++|++..-..=+
T Consensus       157 ~k~~~~~~~~~~~~-~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~-~~-~~~~lp~~~~~~~G~~~~n~~~~  233 (345)
T PRK13499        157 LKERKMGIKKAEEF-NLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGV-DP-LYAALPSYVVIMGGGAITNLGFC  233 (345)
T ss_pred             hccccccccccccc-chHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCC-Cc-hHHHHHHHHHHHHHHHHHHHHHH
Confidence            22222111100000 00112222222222211110000     01    1121 11 1111   111 233331110000


Q ss_pred             HHHHHH-HhhcCCccccc-----hHHHHHHHHHHHHHHHHHHHhccchhhhhhhhhccCc--eeecchhHHHHHHHHHHH
Q 018191          196 LGTSLK-LTFEGKNQLLY-----PDTWFFMLVVAICVIMQMNYLNKESQMMLQALDTFNT--AVVSPIYYVMFTSLTILA  267 (359)
Q Consensus       196 v~~~l~-~~~~g~~~~~~-----~~ty~~l~~~v~~~l~Q~~~ln~~~~~~~~AL~~~~~--~~v~Pv~~v~~t~~~i~~  267 (359)
                      .-..-| .+.+....+..     +..|++....-+.-..|..+.-.    +. + +..++  ....++-+-...+.+.+.
T Consensus       234 ~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~----~~-~-~~g~~~~~~sw~l~m~~~Viistlw  307 (345)
T PRK13499        234 FIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAM----GH-S-KLGAQYDFVSWMLHMSFYVLCGNLW  307 (345)
T ss_pred             HHHHhhCCCcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHH----HH-H-HcCCccchHHHHHhccHHHHHHHHh
Confidence            000001 01110112222     45566655555555555444322    00 1 11111  111223333344667777


Q ss_pred             HHHHhcccCCCCHHHHHHHHHHHHHHHHhhhhhccc
Q 018191          268 SVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTT  303 (359)
Q Consensus       268 G~i~f~E~~~~~~~~~~~~~~G~~~~~~Gv~lLs~~  303 (359)
                      |+ +++||+..+........+|+++++.|.+++.-.
T Consensus       308 Gi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~  342 (345)
T PRK13499        308 GL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGLG  342 (345)
T ss_pred             hh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence            87 599999988889999999999999999987643

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.04  E-value=2.3e-05  Score=75.64  Aligned_cols=126  Identities=19%  Similarity=0.108  Sum_probs=94.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhcC----c---------ccCCcccccccch-----hHHHHHHHHHHHHH
Q 018191            7 NLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASG----V---------RAGVGGFTYLLEP-----LWWVGMAIMIVGEV   68 (359)
Q Consensus         7 ~~iGv~LAl~ss~~~a~G~vlqk~~~~~~~~~~~----~---------~~g~~~~~~l~~p-----~W~~G~~l~~~g~~   68 (359)
                      ..+|.++++.++++.+...++.||..++.+...-    .         -.-... ....++     .++.|++..++++.
T Consensus       146 ~~~G~ll~l~aa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~l~lgv~~t~~~~~  224 (293)
T PRK10532        146 DLTGAALALGAGACWAIYILSGQRAGAEHGPATVAIGSLIAALIFVPIGALQAG-EALWHWSILPLGLAVAILSTALPYS  224 (293)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHccC-cccCCHHHHHHHHHHHHHHHHHHHH
Confidence            3579999999999999999988775332111000    0         000000 011121     24667777788889


Q ss_pred             HHHHHHhhchhhhhhchhhHHHHHHHHHHHHHhcCCCCccchhhHHHHhhhhheeeeecCCCCCC
Q 018191           69 ANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPI  133 (359)
Q Consensus        69 ~~~~Al~~ap~slv~Pl~a~~li~~~ila~~~L~e~l~~~~~~G~~li~~G~~liv~~a~~~~~~  133 (359)
                      ++..++...|.+.+.++..+..+++.+++.+++||+++..+++|.++++.|+.......++|++.
T Consensus       225 l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~~~~~  289 (293)
T PRK10532        225 LEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRREPKI  289 (293)
T ss_pred             HHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999886655554443

>TIGR00688 rarD rarD protein

Probab=97.85  E-value=0.0027  Score=59.71  Aligned_cols=62  Identities=13%  Similarity=0.127  Sum_probs=57.6

Q ss_pred             HHHHHHHHHHHHhhchhhhhhchhhHHHHHHHHHHHHHhcCCCCccchhhHHHHhhhhheee
Q 018191           63 MIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIV  124 (359)
Q Consensus        63 ~~~g~~~~~~Al~~ap~slv~Pl~a~~li~~~ila~~~L~e~l~~~~~~G~~li~~G~~liv  124 (359)
                      +..+..+.+.++...|.+..+-+...+-++.++++++++|||+++++|+|+++..+|+.++.
T Consensus        80 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~  141 (256)
T TIGR00688        80 IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI  141 (256)
T ss_pred             HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence            55677899999999999999999999999999999999999999999999999999998764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=97.74  E-value=0.00023  Score=66.52  Aligned_cols=115  Identities=17%  Similarity=0.192  Sum_probs=85.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhc-Cc---cc------------CCcccccccchhH----HHHHHHHHH
Q 018191            6 DNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAAS-GV---RA------------GVGGFTYLLEPLW----WVGMAIMIV   65 (359)
Q Consensus         6 ~~~iGv~LAl~ss~~~a~G~vlqk~~~~~~~~~~-~~---~~------------g~~~~~~l~~p~W----~~G~~l~~~   65 (359)
                      +...|..++++++++.+...++.||...+.+... ..   +.            -.+.........|    +.|.+..++
T Consensus       125 ~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (260)
T TIGR00950       125 INPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNPQALSLQWGALLYLGLIGTAL  204 (260)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHH
Confidence            4467999999999999999999999754322100 00   00            0000011112223    244445567


Q ss_pred             HHHHHHHHHhhchhhhhhchhhHHHHHHHHHHHHHhcCCCCccchhhHHHHhhhh
Q 018191           66 GEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGS  120 (359)
Q Consensus        66 g~~~~~~Al~~ap~slv~Pl~a~~li~~~ila~~~L~e~l~~~~~~G~~li~~G~  120 (359)
                      +..+++.++...|.+.+..+..+..+++.+++.+++||+++..++.|+.+++.|+
T Consensus       205 ~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       205 AYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            8889999999999999999999999999999999999999999999999999886

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=97.71  E-value=0.00021  Score=57.89  Aligned_cols=85  Identities=16%  Similarity=0.046  Sum_probs=45.5

Q ss_pred             HHHHHHHHHHHHHHHhhHHHhhhhcCcccCCcccccccchhHHHHHH-HHHHHHHHHHHHHhhchhhhhhchh-hHHHHH
Q 018191           15 LLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMA-IMIVGEVANFVAYAFAPAVLVTPLG-ALSIIV   92 (359)
Q Consensus        15 l~ss~~~a~G~vlqk~~~~~~~~~~~~~~g~~~~~~l~~p~W~~G~~-l~~~g~~~~~~Al~~ap~slv~Pl~-a~~li~   92 (359)
                      +++.++...+....|++                 .-.+++.|..+.+ ++++++.+...|+...|.++..|+- +++.+.
T Consensus         7 ~~a~~~ev~~~~~lK~s-----------------~g~~~~~~~~~~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~   69 (93)
T PF00893_consen    7 LLAILFEVVGTIALKAS-----------------HGFTQLIPTILAVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVG   69 (93)
T ss_dssp             HHHHHHHHHHHHH-------------------------------HHHHHHHHHHHHHHHHH-------HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHH-----------------HhhcchhhHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHH
Confidence            34555666677777762                 1133445555544 6788989999999999999999985 599999


Q ss_pred             HHHHHHHHhcCCCCccchhhHHHH
Q 018191           93 SAVLAHFILHEKLPQLGILGCVMC  116 (359)
Q Consensus        93 ~~ila~~~L~e~l~~~~~~G~~li  116 (359)
                      ..+.+.++.||+++..++.|+.++
T Consensus        70 ~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   70 VTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHhCCCCCHHHHhheeeC
Confidence            999999999999999999999875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=97.69  E-value=0.00022  Score=71.37  Aligned_cols=124  Identities=17%  Similarity=0.207  Sum_probs=87.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhcC-----------------cc-cCCcccccc--cchhHHHHHHH---
Q 018191            6 DNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASG-----------------VR-AGVGGFTYL--LEPLWWVGMAI---   62 (359)
Q Consensus         6 ~~~iGv~LAl~ss~~~a~G~vlqk~~~~~~~~~~~-----------------~~-~g~~~~~~l--~~p~W~~G~~l---   62 (359)
                      ++.+|.++++.|+++.+...++||+-.++-+....                 .- .+.......  .++ ++..++.   
T Consensus       186 ~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~i~y~~i  264 (358)
T PLN00411        186 DWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDI-TLITIVTMAI  264 (358)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccch-HHHHHHHHHH
Confidence            35779999999999999999999986544211100                 00 000000000  011 1112221   


Q ss_pred             -HHHHHHHHHHHHhhchhhhhhchhhHHHHHHHHHHHHHhcCCCCccchhhHHHHhhhhheeeeecCCC
Q 018191           63 -MIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQE  130 (359)
Q Consensus        63 -~~~g~~~~~~Al~~ap~slv~Pl~a~~li~~~ila~~~L~e~l~~~~~~G~~li~~G~~liv~~a~~~  130 (359)
                       ..+++.+|..++...+.+.+....-+.-+++++++..+|+|+++..+++|+++++.|+.+......+|
T Consensus       265 ~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~~~~  333 (358)
T PLN00411        265 ITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGKANE  333 (358)
T ss_pred             HHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhhhhh
Confidence             22366778888999999999999999999999999999999999999999999999999875443333

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=97.67  E-value=0.0034  Score=59.57  Aligned_cols=73  Identities=18%  Similarity=0.342  Sum_probs=66.7

Q ss_pred             HHHHHHHHHHHHHHHHHhhchhhhhhchhhHHHHHHHHHHHHHhcCCCCccchhhHHHHhhhhheeeeecCCC
Q 018191           58 VGMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQE  130 (359)
Q Consensus        58 ~G~~l~~~g~~~~~~Al~~ap~slv~Pl~a~~li~~~ila~~~L~e~l~~~~~~G~~li~~G~~liv~~a~~~  130 (359)
                      +=-++|.+.+.+.++++...+.+.-|=+.-.-++++++++.++||+|+++++|++..+.+.|++++-.....+
T Consensus        22 vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~   94 (244)
T PF04142_consen   22 VPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS   94 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence            4447899999999999999999999999999999999999999999999999999999999999886655443

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.61  E-value=0.00095  Score=55.86  Aligned_cols=99  Identities=15%  Similarity=0.105  Sum_probs=76.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhcCcccCCcccccccchhHHHHHH-HHHHHHHHHHHHHhhchhhhhhchh
Q 018191            8 LKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMA-IMIVGEVANFVAYAFAPAVLVTPLG   86 (359)
Q Consensus         8 ~iGv~LAl~ss~~~a~G~vlqk~~~~~~~~~~~~~~g~~~~~~l~~p~W~~G~~-l~~~g~~~~~~Al~~ap~slv~Pl~   86 (359)
                      ...-..=+++.++.-.|....|++.       +          +++|.|...++ .+++++.+-..|+...|..+..++-
T Consensus         6 ~~~~~~L~~Ai~~Ev~~t~~Lk~s~-------g----------f~~~~~~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW   68 (109)
T PRK10650          6 WIHAAWLALAIVLEIVANIFLKFSD-------G----------FRRKIYGILSLAAVLAAFSALSQAVKGIDLSVAYALW   68 (109)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc-------C----------CcchHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHH
Confidence            3444444566677777777776540       1          44666655554 3456777778888999999999985


Q ss_pred             h-HHHHHHHHHHHHHhcCCCCccchhhHHHHhhhhhee
Q 018191           87 A-LSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIII  123 (359)
Q Consensus        87 a-~~li~~~ila~~~L~e~l~~~~~~G~~li~~G~~li  123 (359)
                      + ++.+...+.+.++.||+++..+++|..+++.|++.+
T Consensus        69 ~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         69 GGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            4 899999999999999999999999999999999865

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=97.55  E-value=8.5e-05  Score=60.76  Aligned_cols=69  Identities=25%  Similarity=0.396  Sum_probs=62.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhchhhhhhchhhHHHHHHHHHHHHHhcCCCCccchhhHHHHhhhhheee
Q 018191           56 WWVGMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIV  124 (359)
Q Consensus        56 W~~G~~l~~~g~~~~~~Al~~ap~slv~Pl~a~~li~~~ila~~~L~e~l~~~~~~G~~li~~G~~liv  124 (359)
                      ...|.+...++..+...++...|.+.++++..+..+++.+++..++||+++++++.|+++++.|+.++.
T Consensus        57 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   57 LFLGLLGTALAYLLYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             hHhhccceehHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            345555567888999999999999999999999999999999999999999999999999999998653

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PRK11689 aromatic amino acid exporter; Provisional

Probab=97.49  E-value=0.00048  Score=66.54  Aligned_cols=117  Identities=19%  Similarity=0.150  Sum_probs=83.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhc------C----c-ccCCcccccccchhHHHHH----HHHHHHHHHHHH
Q 018191            8 LKGFVLALLSSFFIGSSFIIKKKGLRRAAAAS------G----V-RAGVGGFTYLLEPLWWVGM----AIMIVGEVANFV   72 (359)
Q Consensus         8 ~iGv~LAl~ss~~~a~G~vlqk~~~~~~~~~~------~----~-~~g~~~~~~l~~p~W~~G~----~l~~~g~~~~~~   72 (359)
                      ..|..++++|+++.+.+.++.||-.++.+...      .    . -.-.+....-.++..|..+    +..++++.++..
T Consensus       155 ~~G~~~~l~aa~~~A~~~v~~k~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~t~~~~~l~~~  234 (295)
T PRK11689        155 PLSYGLAFIGAFIWAAYCNVTRKYARGKNGITLFFILTALALWIKYFLSPQPAMVFSLPAIIKLLLAAAAMGFGYAAWNV  234 (295)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHhcCccccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            46999999999999999999998532211000      0    0 0000000011122222111    223567788999


Q ss_pred             HHhhchhhhhhchhhHHHHHHHHHHHHHhcCCCCccchhhHHHHhhhhheee
Q 018191           73 AYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIV  124 (359)
Q Consensus        73 Al~~ap~slv~Pl~a~~li~~~ila~~~L~e~l~~~~~~G~~li~~G~~liv  124 (359)
                      ++...|.+.+.++..+.-+++.+++.+++||+++..+++|+++++.|+.+..
T Consensus       235 al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~  286 (295)
T PRK11689        235 GILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCW  286 (295)
T ss_pred             HHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHh
Confidence            9999999999999999999999999999999999999999999999988663

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=97.43  E-value=0.00052  Score=65.62  Aligned_cols=267  Identities=20%  Similarity=0.282  Sum_probs=142.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhHHHhhhhc-Cccc-CCc-----ccccccchh--------HHHHHHHH-HHHHHHHHH
Q 018191            9 KGFVLALLSSFFIGSSFIIKKKGLRRAAAAS-GVRA-GVG-----GFTYLLEPL--------WWVGMAIM-IVGEVANFV   72 (359)
Q Consensus         9 iGv~LAl~ss~~~a~G~vlqk~~~~~~~~~~-~~~~-g~~-----~~~~l~~p~--------W~~G~~l~-~~g~~~~~~   72 (359)
                      +|+.+..+| .+.+.+.++-++...-.+..- .-|- +.-     ..-|.+.|-        |++==.+| --|..+...
T Consensus        38 ~gl~l~~vs-~ff~~~~vv~t~~~e~~p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g~R~~LiLRg~mG~tgvmlmyy  116 (346)
T KOG4510|consen   38 LGLLLLTVS-YFFNSCMVVSTKVLENDPMELASFRLLVRMLITYPCLIYYMQPVIGPEGKRKWLILRGFMGFTGVMLMYY  116 (346)
T ss_pred             cCceehhhH-HHHhhHHHhhhhhhccChhHhhhhhhhhehhhhheEEEEEeeeeecCCCcEEEEEeehhhhhhHHHHHHH
Confidence            577888888 777888878777654322110 1110 000     011222221        21111122 235567788


Q ss_pred             HHhhchhhhhhchhhHHHHHHHHHHHHHhcCCCCccchhhHHHHhhhhheee----eecCCCCCCCCHHHHHHHhcChhH
Q 018191           73 AYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIV----IHAPQESPITSVQEIWSLATQPAF  148 (359)
Q Consensus        73 Al~~ap~slv~Pl~a~~li~~~ila~~~L~e~l~~~~~~G~~li~~G~~liv----~~a~~~~~~~s~~el~~~~~~~~f  148 (359)
                      ||.+.|++=..-+.-.+-+++.++|+.+||||.++.|.+|+.....|+++++    +|+.++....+.+   .-+..|..
T Consensus       117 a~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~---~~~~~~gt  193 (346)
T KOG4510|consen  117 ALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQ---VEYDIPGT  193 (346)
T ss_pred             HHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCcccccccc---ccccCCch
Confidence            8888888777777778889999999999999999999999999999999986    4554332222211   11122331


Q ss_pred             HHHHHHHHHH--HHH--HHHhhcccCCCchhHHHHHHHHhhhhHHHHHHHHHHHHHHHhhcCCcccc-chHH-HHHHHHH
Q 018191          149 LLYVASVIVL--VFI--LIFHFAPRCGNTNALVFIGICSLMGSLSVMSVKALGTSLKLTFEGKNQLL-YPDT-WFFMLVV  222 (359)
Q Consensus       149 l~y~~~~~~~--~~~--li~~~~~r~g~~~~~~y~~i~gl~g~~tvl~~K~v~~~l~~~~~g~~~~~-~~~t-y~~l~~~  222 (359)
                      .  +.+..++  +.+  ++-+..++-...-.+.|-+.-+++.++-..  -.+         |.-|+- .+.= |+++..+
T Consensus       194 ~--aai~s~lf~asvyIilR~iGk~~h~~msvsyf~~i~lV~s~I~~--~~i---------g~~~lP~cgkdr~l~~~lG  260 (346)
T KOG4510|consen  194 V--AAISSVLFGASVYIILRYIGKNAHAIMSVSYFSLITLVVSLIGC--ASI---------GAVQLPHCGKDRWLFVNLG  260 (346)
T ss_pred             H--HHHHhHhhhhhHHHHHHHhhccccEEEEehHHHHHHHHHHHHHH--hhc---------cceecCccccceEEEEEeh
Confidence            1  1111111  111  111222221111112232222222111100  011         111111 1222 3444556


Q ss_pred             HHHHHHHHHHhccchhhhhhhhhccCceeecchhHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHhhhhhcc
Q 018191          223 AICVIMQMNYLNKESQMMLQALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHT  302 (359)
Q Consensus       223 v~~~l~Q~~~ln~~~~~~~~AL~~~~~~~v~Pv~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~~~~~Gv~lLs~  302 (359)
                      +.+.+.| .++.+       +||+=.+-- +.++.+...+++.+--+++|+||-  +.|.+    +|.+.++..++..+.
T Consensus       261 vfgfigQ-IllTm-------~lQiErAGp-vaim~~~dvvfAf~wqv~ff~~~P--t~ws~----~Ga~~vvsS~v~~a~  325 (346)
T KOG4510|consen  261 VFGFIGQ-ILLTM-------GLQIERAGP-VAIMTYTDVVFAFFWQVLFFGHWP--TIWSW----VGAVMVVSSTVWVAL  325 (346)
T ss_pred             hhhhHHH-HHHHH-------HhhhhccCC-eehhhHHHHHHHHHHHHHHhcCCC--hHHHh----hceeeeehhHHHHHH
Confidence            6666766 46678       888765544 345677788889999999999984  34544    455555655665555


Q ss_pred             cCCCC
Q 018191          303 TKDFE  307 (359)
Q Consensus       303 ~~~~~  307 (359)
                      .|-..
T Consensus       326 ~kwa~  330 (346)
T KOG4510|consen  326 KKWAG  330 (346)
T ss_pred             HHHhc
Confidence            55433

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=97.43  E-value=0.00068  Score=65.29  Aligned_cols=120  Identities=13%  Similarity=0.059  Sum_probs=87.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhc---------------CcccCCcccccccchhHH----HHHHHHHHH
Q 018191            6 DNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAAS---------------GVRAGVGGFTYLLEPLWW----VGMAIMIVG   66 (359)
Q Consensus         6 ~~~iGv~LAl~ss~~~a~G~vlqk~~~~~~~~~~---------------~~~~g~~~~~~l~~p~W~----~G~~l~~~g   66 (359)
                      ....|..+++.++++.+.+.+..||..++.+...               ..-.+...........|+    .|+...+++
T Consensus       147 ~~~~G~l~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~  226 (292)
T PRK11272        147 GNPWGAILILIASASWAFGSVWSSRLPLPVGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIA  226 (292)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHH
Confidence            3457999999999999999999888432211000               000000000101112232    344455677


Q ss_pred             HHHHHHHHhhchhhhhhchhhHHHHHHHHHHHHHhcCCCCccchhhHHHHhhhhheeee
Q 018191           67 EVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVI  125 (359)
Q Consensus        67 ~~~~~~Al~~ap~slv~Pl~a~~li~~~ila~~~L~e~l~~~~~~G~~li~~G~~liv~  125 (359)
                      ..++..++...|.+.+..+..+..+++++++.+++||+++..+++|+++++.|+.+...
T Consensus       227 ~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~  285 (292)
T PRK11272        227 ISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTL  285 (292)
T ss_pred             HHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHH
Confidence            88999999999999999999999999999999999999999999999999999987643

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.35  E-value=0.002  Score=53.56  Aligned_cols=91  Identities=15%  Similarity=0.078  Sum_probs=71.1

Q ss_pred             HHHHHHHHHHHHHHhhHHHhhhhcCcccCCcccccccchhHHH-HHHHHHHHHHHHHHHHhhchhhhhhchhh-HHHHHH
Q 018191           16 LSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWV-GMAIMIVGEVANFVAYAFAPAVLVTPLGA-LSIIVS   93 (359)
Q Consensus        16 ~ss~~~a~G~vlqk~~~~~~~~~~~~~~g~~~~~~l~~p~W~~-G~~l~~~g~~~~~~Al~~ap~slv~Pl~a-~~li~~   93 (359)
                      ++.++.-.|....|++    +   +          ++++.|+. -++++.+++.+-..|+...|.++..++=+ ++.+.+
T Consensus         8 ~Ai~~Ev~~t~~Lk~s----~---g----------f~~~~~~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~   70 (105)
T PRK11431          8 IAGLLEVVWAVGLKYT----H---G----------FSRLTPSIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGA   70 (105)
T ss_pred             HHHHHHHHHHHHHHhh----h---C----------CccHHHHHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHH
Confidence            3455566666666653    0   0          23555544 44556778888888899999999999865 999999


Q ss_pred             HHHHHHHhcCCCCccchhhHHHHhhhhhee
Q 018191           94 AVLAHFILHEKLPQLGILGCVMCIAGSIII  123 (359)
Q Consensus        94 ~ila~~~L~e~l~~~~~~G~~li~~G~~li  123 (359)
                      .+.+.++.||+++..+++|+.+++.|++.+
T Consensus        71 ~lig~~~f~e~~~~~~~~gi~lIi~GVv~l  100 (105)
T PRK11431         71 AITGIVLLGESASPARLLSLALIVAGIIGL  100 (105)
T ss_pred             HHHHHHHhCCCCCHHHHHHHHHHHHHHHhh
Confidence            999999999999999999999999999976

>COG2510 Predicted membrane protein [Function unknown]

Probab=97.24  E-value=0.002  Score=55.32  Aligned_cols=77  Identities=21%  Similarity=0.393  Sum_probs=54.4

Q ss_pred             chHHHHHHHHH-HHHHHHHHHHhccchhhhhhhhhccCceeecchhHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHH
Q 018191          212 YPDTWFFMLVV-AICVIMQMNYLNKESQMMLQALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGF  290 (359)
Q Consensus       212 ~~~ty~~l~~~-v~~~l~Q~~~ln~~~~~~~~AL~~~~~~~v~Pv~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~  290 (359)
                      ++..|.+++.. +.+.+..+.|+ +       ||+.++++.|.|+- -.....+++.+..+++|....  .    ...|+
T Consensus        63 ~~k~~lflilSGla~glswl~Yf-~-------ALk~G~as~VvPld-k~svvl~~lls~lfL~E~ls~--~----~~iG~  127 (140)
T COG2510          63 GPKSWLFLILSGLAGGLSWLLYF-R-------ALKKGKASRVVPLD-KTSVVLAVLLSILFLGERLSL--P----TWIGI  127 (140)
T ss_pred             CcceehhhhHHHHHHHHHHHHHH-H-------HHhcCCcceEEEcc-cccHHHHHHHHHHHhcCCCCH--H----HHHHH
Confidence            45555554333 44444444333 5       99999999999984 456677899999999996543  3    34788


Q ss_pred             HHHHHhhhhhccc
Q 018191          291 VVVLSGTILLHTT  303 (359)
Q Consensus       291 ~~~~~Gv~lLs~~  303 (359)
                      +++.+|+++++++
T Consensus       128 ~LI~~Gailvs~~  140 (140)
T COG2510         128 VLIVIGAILVSLR  140 (140)
T ss_pred             HHHHhCeeeEecC
Confidence            8999999998863

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=97.16  E-value=0.003  Score=60.99  Aligned_cols=116  Identities=25%  Similarity=0.297  Sum_probs=84.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhcCcc--------------------cCCc----ccccccchhHH-----H
Q 018191            8 LKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVR--------------------AGVG----GFTYLLEPLWW-----V   58 (359)
Q Consensus         8 ~iGv~LAl~ss~~~a~G~vlqk~~~~~~~~~~~~~--------------------~g~~----~~~~l~~p~W~-----~   58 (359)
                      ..|..+++.++++.+...+++||-.++.+......                    .+..    .... .++.+|     .
T Consensus       142 ~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l  220 (299)
T PRK11453        142 MLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVT-IDMTTILSLMYL  220 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhcc-CCHHHHHHHHHH
Confidence            47999999999999999999998532211100000                    0000    0000 122222     3


Q ss_pred             HHHHHHHHHHHHHHHHhhchhhhhhchhhHHHHHHHHHHHHHhcCCCCccchhhHHHHhhhhheee
Q 018191           59 GMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIV  124 (359)
Q Consensus        59 G~~l~~~g~~~~~~Al~~ap~slv~Pl~a~~li~~~ila~~~L~e~l~~~~~~G~~li~~G~~liv  124 (359)
                      |++..++++.+++.++...+..-+.++..+.-+++.+++.+++||+++..+++|.++++.|+.+..
T Consensus       221 ~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~  286 (299)
T PRK11453        221 AFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINV  286 (299)
T ss_pred             HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHh
Confidence            445556777888888888899999999999999999999999999999999999999999998653

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.00  E-value=0.0074  Score=50.21  Aligned_cols=72  Identities=15%  Similarity=0.126  Sum_probs=61.1

Q ss_pred             cchhHHHHH-HHHHHHHHHHHHHHhhchhhhhhch-hhHHHHHHHHHHHHHhcCCCCccchhhHHHHhhhhhee
Q 018191           52 LEPLWWVGM-AIMIVGEVANFVAYAFAPAVLVTPL-GALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIII  123 (359)
Q Consensus        52 ~~p~W~~G~-~l~~~g~~~~~~Al~~ap~slv~Pl-~a~~li~~~ila~~~L~e~l~~~~~~G~~li~~G~~li  123 (359)
                      +|+.|.+.+ +.+++++.+-..|+...|+.+..++ .+++.+..++.+.+++||+++..+++|..++++|++.+
T Consensus        28 ~~~~~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~L  101 (106)
T COG2076          28 TRLWPSILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGL  101 (106)
T ss_pred             cccchHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHh
Confidence            355555544 4556778888888999999999886 67899999999999999999999999999999999876

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=96.95  E-value=0.0012  Score=63.14  Aligned_cols=115  Identities=17%  Similarity=0.144  Sum_probs=81.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhcCc-c--c-----C-C---------ccccc-ccchhH----HHHHHHHH
Q 018191            8 LKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGV-R--A-----G-V---------GGFTY-LLEPLW----WVGMAIMI   64 (359)
Q Consensus         8 ~iGv~LAl~ss~~~a~G~vlqk~~~~~~~~~~~~-~--~-----g-~---------~~~~~-l~~p~W----~~G~~l~~   64 (359)
                      ..|..+++.++++.+.+.++.|+...+.+..... .  .     + .         +.... ...+.|    +.+.+..+
T Consensus       143 ~~g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  222 (281)
T TIGR03340       143 RKAYAWALAAALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRSMFPYARQILPSATLGGLMIG  222 (281)
T ss_pred             hhHHHHHHHHHHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHH
Confidence            3577789999999999998888753221110000 0  0     0 0         00000 011122    23444456


Q ss_pred             HHHHHHHHHHhhchhhhhhchhhHHHHHHHHHHHHHhcCCCCccchhhHHHHhhhhhe
Q 018191           65 VGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSII  122 (359)
Q Consensus        65 ~g~~~~~~Al~~ap~slv~Pl~a~~li~~~ila~~~L~e~l~~~~~~G~~li~~G~~l  122 (359)
                      +++.+++.++...|.+.+.++.-++.+++.+++.+++||+++..+++|.+++++|+.+
T Consensus       223 l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       223 GAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            7888999999999999999999999999999999999999999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=96.82  E-value=0.12  Score=50.16  Aligned_cols=122  Identities=24%  Similarity=0.239  Sum_probs=78.4

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHh----hHHHhhhhc-------------CcccCCcccccccchhHHHHHHHHHHHH
Q 018191            5 KDNLKGFVLALLSSFFIGSSFIIKKK----GLRRAAAAS-------------GVRAGVGGFTYLLEPLWWVGMAIMIVGE   67 (359)
Q Consensus         5 ~~~~iGv~LAl~ss~~~a~G~vlqk~----~~~~~~~~~-------------~~~~g~~~~~~l~~p~W~~G~~l~~~g~   67 (359)
                      .+.--|+++++.+.++-+.-....|.    +..+.-.+-             -.|.-...++..++|+=+..+.+..+=.
T Consensus         3 ~~~~~Gil~~l~Ay~lwG~lp~y~kll~~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li   82 (293)
T COG2962           3 KDSRKGILLALLAYLLWGLLPLYFKLLEPLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLI   82 (293)
T ss_pred             CcccchhHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHH
Confidence            45567899999999887766544443    111100000             0010012345678887777777776666


Q ss_pred             HHHHHHHhhchhh---hhhchhh-HHHHHHHHHHHHHhcCCCCccchhhHHHHhhhhheeeee
Q 018191           68 VANFVAYAFAPAV---LVTPLGA-LSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIH  126 (359)
Q Consensus        68 ~~~~~Al~~ap~s---lv~Pl~a-~~li~~~ila~~~L~e~l~~~~~~G~~li~~G~~liv~~  126 (359)
                      ..|..-+-.+|-.   +=+.+|= +.-++|.++++.++|||+++.+|+++.+..+|+......
T Consensus        83 ~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~  145 (293)
T COG2962          83 GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWL  145 (293)
T ss_pred             HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Confidence            6787777777755   2222221 223577899999999999999999999999999865443

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=96.80  E-value=0.0062  Score=56.83  Aligned_cols=117  Identities=22%  Similarity=0.280  Sum_probs=84.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhcCcc------c----------CCcccccccchhH--HHHHHHHHHHHHH
Q 018191            8 LKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVR------A----------GVGGFTYLLEPLW--WVGMAIMIVGEVA   69 (359)
Q Consensus         8 ~iGv~LAl~ss~~~a~G~vlqk~~~~~~~~~~~~~------~----------g~~~~~~l~~p~W--~~G~~l~~~g~~~   69 (359)
                      ..|..+++.++++.+...++.|+-. +........      .          ........+...+  +.|++..+++..+
T Consensus       153 ~~g~~~~l~a~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~  231 (292)
T COG0697         153 LLGLLLALAAALLWALYTALVKRLS-RLGPVTLALLLQLLLALLLLLLFFLSGFGAPILSRAWLLLLYLGVFSTGLAYLL  231 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHHhccccccCCHHHHHHHHHHHHHHHHHHHHH
Confidence            6899999999999999999998643 111000000      0          0000011111111  2333444457888


Q ss_pred             HHHHHhhchhhhhhchhhHHHHHHHHHHHHHhcCCCCccchhhHHHHhhhhheeee
Q 018191           70 NFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVI  125 (359)
Q Consensus        70 ~~~Al~~ap~slv~Pl~a~~li~~~ila~~~L~e~l~~~~~~G~~li~~G~~liv~  125 (359)
                      ++.++...|...++|+..+..+++.+++.++++|+++..+++|+++++.|+.+...
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~  287 (292)
T COG0697         232 WYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASL  287 (292)
T ss_pred             HHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhc
Confidence            89999999999999999999999999999999999999999999999999987644

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=96.71  E-value=0.017  Score=48.24  Aligned_cols=106  Identities=14%  Similarity=0.204  Sum_probs=68.6

Q ss_pred             HHHHHHhhhhHHHHHHHHHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHHhccchhhhhhhhhccCceeecchhH
Q 018191          178 FIGICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKESQMMLQALDTFNTAVVSPIYY  257 (359)
Q Consensus       178 y~~i~gl~g~~tvl~~K~v~~~l~~~~~g~~~~~~~~ty~~l~~~v~~~l~Q~~~ln~~~~~~~~AL~~~~~~~v~Pv~~  257 (359)
                      |..++.++.....++.|.-...      .+..+++|.........+.+...-..++..       ++++-|.++.+|+.+
T Consensus         5 ~l~~ai~~ev~g~~~lK~s~~~------~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~-------al~~iplg~Ay~~~~   71 (111)
T PRK15051          5 TLVFASLLSVAGQLCQKQATRP------VAIGKRRKHIVLWLGLALACLGLAMVLWLL-------VLQNVPVGIAYPMLS   71 (111)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcc------CCcchhhhHHHHHHHHHHHHHHHHHHHHHH-------HHhhCChHHHHHHHH
Confidence            4444544444444555642210      011244554334444444444445666677       999999999999998


Q ss_pred             HHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHhhhhhccc
Q 018191          258 VMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTT  303 (359)
Q Consensus       258 v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~~~~~Gv~lLs~~  303 (359)
                       .-.+.+.+.|..+|||..+  +.    ..+|.+++++|+++++++
T Consensus        72 -l~~v~~~~~~~l~f~E~ls--~~----~~~Gi~lii~Gv~~i~~~  110 (111)
T PRK15051         72 -LNFVWVTLAAVKLWHEPVS--PR----HWCGVAFIIGGIVILGST  110 (111)
T ss_pred             -HHHHHHHHHHHHHhCCCCC--HH----HHHHHHHHHHHHHHHhcc
Confidence             6777789999999999654  44    447778889999998865

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=96.33  E-value=0.045  Score=45.84  Aligned_cols=79  Identities=14%  Similarity=0.108  Sum_probs=60.4

Q ss_pred             ccchHHHHHHHHHHHHHHHHHHHhccchhhhhhhhhccCceeecchhHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHH
Q 018191          210 LLYPDTWFFMLVVAICVIMQMNYLNKESQMMLQALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICG  289 (359)
Q Consensus       210 ~~~~~ty~~l~~~v~~~l~Q~~~ln~~~~~~~~AL~~~~~~~v~Pv~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G  289 (359)
                      |++|.+....++.   ...-.+++.+       |+++-|..+.+|+-...=++...+.|.++|||..+  +.    -..|
T Consensus        27 f~~~~~~i~~~~~---~~~sf~~l~~-------al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~--~~----~~~g   90 (110)
T PRK09541         27 FTRLWPSVGTIIC---YCASFWLLAQ-------TLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLD--LP----AIIG   90 (110)
T ss_pred             CCchhHHHHHHHH---HHHHHHHHHH-------HHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCC--HH----HHHH
Confidence            6777776654333   3334667778       99999999999988877888899999999999654  43    4577


Q ss_pred             HHHHHHhhhhhcccC
Q 018191          290 FVVVLSGTILLHTTK  304 (359)
Q Consensus       290 ~~~~~~Gv~lLs~~~  304 (359)
                      ..+++.|++++....
T Consensus        91 i~lIi~GVi~l~l~~  105 (110)
T PRK09541         91 MMLICAGVLVINLLS  105 (110)
T ss_pred             HHHHHHHHHHHhcCC
Confidence            788999999996544

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=96.23  E-value=0.36  Score=48.06  Aligned_cols=76  Identities=21%  Similarity=0.235  Sum_probs=66.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhchhhhhhchhhHHHHHHHHHHHHHhcCCCCccchhhHHHHhhhhheeeeecCCC
Q 018191           55 LWWVGMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQE  130 (359)
Q Consensus        55 ~W~~G~~l~~~g~~~~~~Al~~ap~slv~Pl~a~~li~~~ila~~~L~e~l~~~~~~G~~li~~G~~liv~~a~~~  130 (359)
                      .|-+=.++|.+-+-+++++++..|...-+...-+-++.++++...+|++|+++++|...++..+|+.++=+..+.+
T Consensus        94 k~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~  169 (345)
T KOG2234|consen   94 KVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSP  169 (345)
T ss_pred             HHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCC
Confidence            3445557888877799999999999999999999999999999999999999999999999999999886433333

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=96.15  E-value=0.0094  Score=57.56  Aligned_cols=63  Identities=13%  Similarity=-0.036  Sum_probs=58.3

Q ss_pred             HHHHHHHHHHHhhchhhhhhchhhHHHHHHHHHHHHHhcCCCCccchhhHHHHhhhhheeeee
Q 018191           64 IVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIH  126 (359)
Q Consensus        64 ~~g~~~~~~Al~~ap~slv~Pl~a~~li~~~ila~~~L~e~l~~~~~~G~~li~~G~~liv~~  126 (359)
                      .+++.+++.+++..|.+.++++.-+..+++.+++.++++|+++...++|++++++|+.++...
T Consensus       224 ~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~  286 (296)
T PRK15430        224 TVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMD  286 (296)
T ss_pred             HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            367889999999999999999999999999999999999999999999999999988876543

>PRK11431 multidrug efflux system protein; Provisional

Probab=95.86  E-value=0.084  Score=43.85  Aligned_cols=79  Identities=10%  Similarity=0.188  Sum_probs=60.8

Q ss_pred             cccchHHHHHHHHHHHHHHHHHHHhccchhhhhhhhhccCceeecchhHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHH
Q 018191          209 QLLYPDTWFFMLVVAICVIMQMNYLNKESQMMLQALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEIC  288 (359)
Q Consensus       209 ~~~~~~ty~~l~~~v~~~l~Q~~~ln~~~~~~~~AL~~~~~~~v~Pv~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~  288 (359)
                      .|+++.++++.++..   ..=.+++.+       |++.-|..+.+++-...=+..+.+.|.++|+|..+  +.    ..+
T Consensus        25 gf~~~~~~~~~i~~~---~~sf~~Ls~-------al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~--~~----~~~   88 (105)
T PRK11431         25 GFSRLTPSIITVTAM---IVSMALLAW-------AMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESAS--PA----RLL   88 (105)
T ss_pred             CCccHHHHHHHHHHH---HHHHHHHHH-------HHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCC--HH----HHH
Confidence            377888777664443   333677888       99999999988888888888899999999999654  43    446


Q ss_pred             HHHHHHHhhhhhccc
Q 018191          289 GFVVVLSGTILLHTT  303 (359)
Q Consensus       289 G~~~~~~Gv~lLs~~  303 (359)
                      |+.+++.|++.|...
T Consensus        89 gi~lIi~GVv~l~l~  103 (105)
T PRK11431         89 SLALIVAGIIGLKLS  103 (105)
T ss_pred             HHHHHHHHHHhhhcc
Confidence            778899999998543

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=95.73  E-value=0.062  Score=46.21  Aligned_cols=73  Identities=14%  Similarity=0.138  Sum_probs=52.6

Q ss_pred             HHHHHHHHHHHHhccchhhhhhhhhccCceeecchhHHHHHHHHHHHHH-HHhcccCCCCHHHHHHHHHHHHHHHHhhhh
Q 018191          221 VVAICVIMQMNYLNKESQMMLQALDTFNTAVVSPIYYVMFTSLTILASV-IMFKDWDGQTAASIISEICGFVVVLSGTIL  299 (359)
Q Consensus       221 ~~v~~~l~Q~~~ln~~~~~~~~AL~~~~~~~v~Pv~~v~~t~~~i~~G~-i~f~E~~~~~~~~~~~~~~G~~~~~~Gv~l  299 (359)
                      .++++...-..+.+.       +|++.|.++.+|+....+....+.+-. ++|+|...  +.    ..+|.+++++|+++
T Consensus        53 lgl~~~~la~~~w~~-------aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls--~~----~~iGi~lIi~GV~l  119 (129)
T PRK02971         53 LGLAGYALSMLCWLK-------ALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFS--LK----KTLGVACIMLGVWL  119 (129)
T ss_pred             HHHHHHHHHHHHHHH-------HHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCC--HH----HHHHHHHHHHHHHH
Confidence            344455555667778       999999999999988777544444433 48999654  33    55888899999999


Q ss_pred             hcccCCC
Q 018191          300 LHTTKDF  306 (359)
Q Consensus       300 Ls~~~~~  306 (359)
                      ++++++.
T Consensus       120 v~~~~~~  126 (129)
T PRK02971        120 INLPTTK  126 (129)
T ss_pred             hccCCCC
Confidence            9876553

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=95.67  E-value=0.35  Score=48.59  Aligned_cols=66  Identities=23%  Similarity=0.320  Sum_probs=57.1

Q ss_pred             HHHHHHHHHhhchhhhhhchhhHHHHHHHHHHHHHhcCCCCccchhhHHHHhhhhheeeeecCCCC
Q 018191           66 GEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQES  131 (359)
Q Consensus        66 g~~~~~~Al~~ap~slv~Pl~a~~li~~~ila~~~L~e~l~~~~~~G~~li~~G~~liv~~a~~~~  131 (359)
                      .+...=+||++-..+-.+=+.+.|=+|++.+|.++.+||++..+.+++++.+.|++++.....++.
T Consensus       172 anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~  237 (416)
T KOG2765|consen  172 ANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQN  237 (416)
T ss_pred             HHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEecccccc
Confidence            344444678898888899999999999999999999999999999999999999999988765443

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=95.64  E-value=0.13  Score=43.74  Aligned_cols=67  Identities=16%  Similarity=0.304  Sum_probs=53.4

Q ss_pred             HHHHHHHhccchhhhhhhhhccCceeecchhHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHhhhhhcccCC
Q 018191          226 VIMQMNYLNKESQMMLQALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKD  305 (359)
Q Consensus       226 ~l~Q~~~ln~~~~~~~~AL~~~~~~~v~Pv~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~~~~~Gv~lLs~~~~  305 (359)
                      ...=.+++.+       |++.-|..+.+|+..-.=++...+.|.++|+|..+  ..    -.+|..+++.|++.+....+
T Consensus        40 ~~~sf~~ls~-------al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s--~~----~~~gi~lIi~GVi~l~l~~~  106 (120)
T PRK10452         40 ISLSYIFLSF-------AVKKIALGVAYALWEGIGILFITLFSVLLFDESLS--LM----KIAGLTTLVAGIVLIKSGTR  106 (120)
T ss_pred             HHHHHHHHHH-------HHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCC--HH----HHHHHHHHHHHHHHhhcCCC
Confidence            3334677888       99999999999998777888889999999999654  33    45788889999999865553

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=95.40  E-value=0.14  Score=42.92  Aligned_cols=77  Identities=16%  Similarity=0.214  Sum_probs=59.2

Q ss_pred             cccchHHHHHHHHHHHHHHHHHHHhccchhhhhhhhhccCceeecchhHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHH
Q 018191          209 QLLYPDTWFFMLVVAICVIMQMNYLNKESQMMLQALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEIC  288 (359)
Q Consensus       209 ~~~~~~ty~~l~~~v~~~l~Q~~~ln~~~~~~~~AL~~~~~~~v~Pv~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~  288 (359)
                      .|++|.+.+..++..   ..=.+++.+       |+++-|..+.+|+-.-.-+....+.|.++|+|..+  +.    ...
T Consensus        31 gf~~~~~~~~~~~~~---~~sf~~Ls~-------al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~--~~----~~~   94 (109)
T PRK10650         31 GFRRKIYGILSLAAV---LAAFSALSQ-------AVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLN--RK----GWI   94 (109)
T ss_pred             CCcchHHHHHHHHHH---HHHHHHHHH-------HHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCC--HH----HHH
Confidence            377887766554443   223678888       99999999988888888889999999999999654  33    446


Q ss_pred             HHHHHHHhhhhhc
Q 018191          289 GFVVVLSGTILLH  301 (359)
Q Consensus       289 G~~~~~~Gv~lLs  301 (359)
                      |..+++.|++.|.
T Consensus        95 gi~lIi~GVi~lk  107 (109)
T PRK10650         95 GLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHHHHHHHhc
Confidence            7778889998874

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=95.30  E-value=0.041  Score=53.23  Aligned_cols=117  Identities=21%  Similarity=0.158  Sum_probs=83.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhcC-ccc-----CC----ccc---ccccchhHH----HHHHHHHHHHHH
Q 018191            7 NLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASG-VRA-----GV----GGF---TYLLEPLWW----VGMAIMIVGEVA   69 (359)
Q Consensus         7 ~~iGv~LAl~ss~~~a~G~vlqk~~~~~~~~~~~-~~~-----g~----~~~---~~l~~p~W~----~G~~l~~~g~~~   69 (359)
                      ...|+..++.|+++++.-...-|+.. ..+.... +..     +.    ...   +-..++.+|    .|+. ..+++.+
T Consensus       150 ~~~Gi~~~l~sg~~y~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~-~~ia~~~  227 (290)
T TIGR00776       150 FKKGILLLLMSTIGYLVYVVVAKAFG-VDGLSVLLPQAIGMVIGGIIFNLGHILAKPLKKYAILLNILPGLM-WGIGNFF  227 (290)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHcC-CCcceehhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHH-HHHHHHH
Confidence            36799999999999988887777531 0000000 000     00    000   111122333    4444 4677888


Q ss_pred             HHHHHh-hchhhhhhchhhHHHHHHHHHHHHHhcCCCCccch----hhHHHHhhhhheeee
Q 018191           70 NFVAYA-FAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGI----LGCVMCIAGSIIIVI  125 (359)
Q Consensus        70 ~~~Al~-~ap~slv~Pl~a~~li~~~ila~~~L~e~l~~~~~----~G~~li~~G~~liv~  125 (359)
                      .+.+.. ..+.+...++..+..+.+.+.+.+++||+.+++++    +|+++++.|+.++..
T Consensus       228 y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~  288 (290)
T TIGR00776       228 YLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI  288 (290)
T ss_pred             HHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence            888888 99999999999999999999999999999999999    999999999987643

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=95.30  E-value=0.088  Score=52.35  Aligned_cols=127  Identities=20%  Similarity=0.298  Sum_probs=80.6

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhc-------------CcccC-CcccccccchhHHHHHHHHHHHH-HH
Q 018191            5 KDNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAAS-------------GVRAG-VGGFTYLLEPLWWVGMAIMIVGE-VA   69 (359)
Q Consensus         5 ~~~~iGv~LAl~ss~~~a~G~vlqk~~~~~~~~~~-------------~~~~g-~~~~~~l~~p~W~~G~~l~~~g~-~~   69 (359)
                      ++.++|-++++.|++++|+..++|++-.++.+...             ..-.. .+ +.-+.+-.|=.......+|+ ++
T Consensus       164 ~~~i~GDll~l~~a~lya~~nV~~E~~v~~~~~~~~lg~~Glfg~ii~~iq~~ile-~~~i~~~~w~~~~~~~~v~~~~~  242 (334)
T PF06027_consen  164 SNPILGDLLALLGAILYAVSNVLEEKLVKKAPRVEFLGMLGLFGFIISGIQLAILE-RSGIESIHWTSQVIGLLVGYALC  242 (334)
T ss_pred             CccchhHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHhee-hhhhhccCCChhhHHHHHHHHHH
Confidence            56789999999999999999999999766533221             00000 00 01111111211222233333 45


Q ss_pred             HHHHHhhchhhhh-------hchhhHHHHHHHHHHHHHhcCCCCccchhhHHHHhhhhheeeeecCCCCC
Q 018191           70 NFVAYAFAPAVLV-------TPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESP  132 (359)
Q Consensus        70 ~~~Al~~ap~slv-------~Pl~a~~li~~~ila~~~L~e~l~~~~~~G~~li~~G~~liv~~a~~~~~  132 (359)
                      .+.-|...|..+.       .-=...+-++++++..++.|+++++.-++|.+++++|.++.....+++++
T Consensus       243 lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~~~  312 (334)
T PF06027_consen  243 LFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPEEE  312 (334)
T ss_pred             HHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCcccc
Confidence            5666666665432       11123457888999999999999999999999999999988766655443

Some of the sequences in this family are annotated as putative membrane proteins.

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=95.15  E-value=0.13  Score=43.93  Aligned_cols=113  Identities=21%  Similarity=0.355  Sum_probs=74.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhHHHh----h-hhc-----------------------CcccCCccccccc-----chhH
Q 018191           10 GFVLALLSSFFIGSSFIIKKKGLRRA----A-AAS-----------------------GVRAGVGGFTYLL-----EPLW   56 (359)
Q Consensus        10 Gv~LAl~ss~~~a~G~vlqk~~~~~~----~-~~~-----------------------~~~~g~~~~~~l~-----~p~W   56 (359)
                      |.++++.|+++.++=.+++|+..++.    . .++                       ..+.........+     .+..
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            67889999999999999999877663    1 110                       0000000000111     1122


Q ss_pred             HHHHHHH-H---HHHHHHHHHHhhchhhhhhchhhHHHHHHHHHHHHHhcCCCCccchhhHHHHhhhhhe
Q 018191           57 WVGMAIM-I---VGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSII  122 (359)
Q Consensus        57 ~~G~~l~-~---~g~~~~~~Al~~ap~slv~Pl~a~~li~~~ila~~~L~e~l~~~~~~G~~li~~G~~l  122 (359)
                      +.-++.. +   .-+..++..+.........=++.+--+...+++..+++|+++..++.|++++++|+.+
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~  150 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLL  150 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhe
Confidence            2222222 2   2334555566667777777888899999999999999999999999999999999874

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=94.79  E-value=0.054  Score=52.21  Aligned_cols=118  Identities=17%  Similarity=0.262  Sum_probs=77.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhcCccc-------CC----------cccccc----c--------chhH
Q 018191            6 DNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRA-------GV----------GGFTYL----L--------EPLW   56 (359)
Q Consensus         6 ~~~iGv~LAl~ss~~~a~G~vlqk~~~~~~~~~~~~~~-------g~----------~~~~~l----~--------~p~W   56 (359)
                      .+..|.++++.|+++.++..++.||-..+.+.++ ..-       +.          +.....    .        ...|
T Consensus       142 ~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~-~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (302)
T TIGR00817       142 FNWAGFLSAMISNITFVSRNIFSKKAMTIKSLDK-TNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIY  220 (302)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCc-ccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHH
Confidence            4567999999999999999999888543111110 000       00          000000    0        0112


Q ss_pred             HHHHH----HHHHHHHHHHHHHhhchhhhhhchhhHHHHHHHHHHHHHhcCCCCccchhhHHHHhhhhheee
Q 018191           57 WVGMA----IMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIV  124 (359)
Q Consensus        57 ~~G~~----l~~~g~~~~~~Al~~ap~slv~Pl~a~~li~~~ila~~~L~e~l~~~~~~G~~li~~G~~liv  124 (359)
                      ..+..    .+...+..++.++...+.+...-.+.+--+++.+++.++++|+++..+++|.++++.|+.+.-
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~  292 (302)
T TIGR00817       221 TVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYS  292 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHH
Confidence            11211    122222345567788888888888888889999999999999999999999999999998653

specificities overlap.

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=94.74  E-value=1  Score=43.93  Aligned_cols=71  Identities=17%  Similarity=0.213  Sum_probs=65.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhchhhhhhchhhHHHHHHHHHHHHHhcCCCCccchhhHHHHhhhhheeeee
Q 018191           56 WWVGMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIH  126 (359)
Q Consensus        56 W~~G~~l~~~g~~~~~~Al~~ap~slv~Pl~a~~li~~~ila~~~L~e~l~~~~~~G~~li~~G~~liv~~  126 (359)
                      ...=.++.+.|..+..++|-+-.++--|-+=+.-++|..+++..+||++++.++|+|+..+..|++.+...
T Consensus        89 fl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~  159 (372)
T KOG3912|consen   89 FLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSL  159 (372)
T ss_pred             ecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeee
Confidence            34456888999999999999999999999999999999999999999999999999999999999988765

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=94.50  E-value=0.31  Score=46.68  Aligned_cols=124  Identities=20%  Similarity=0.222  Sum_probs=87.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhcC--------------cccCCcccccccch-hHHHHHHHHHHH----
Q 018191            6 DNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASG--------------VRAGVGGFTYLLEP-LWWVGMAIMIVG----   66 (359)
Q Consensus         6 ~~~iGv~LAl~ss~~~a~G~vlqk~~~~~~~~~~~--------------~~~g~~~~~~l~~p-~W~~G~~l~~~g----   66 (359)
                      -...|+.+|+.+..|-+.=.+.-||.-+..+...+              ....+.+ ..+.+| .-..++..-+.+    
T Consensus       145 lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~g~~g~a~gm~vAaviv~Pig~~~ag-~~l~~p~ll~laLgvavlSSalP  223 (292)
T COG5006         145 LDPVGVALALGAGACWALYIVLGQRAGRAEHGTAGVAVGMLVAALIVLPIGAAQAG-PALFSPSLLPLALGVAVLSSALP  223 (292)
T ss_pred             CCHHHHHHHHHHhHHHHHHHHHcchhcccCCCchHHHHHHHHHHHHHhhhhhhhcc-hhhcChHHHHHHHHHHHHhcccc
Confidence            34589999999999988777776664321110000              0001112 233343 334455444443    


Q ss_pred             HHHHHHHHhhchhhhhhchhhHHHHHHHHHHHHHhcCCCCccchhhHHHHhhhhheeeeecCCC
Q 018191           67 EVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQE  130 (359)
Q Consensus        67 ~~~~~~Al~~ap~slv~Pl~a~~li~~~ila~~~L~e~l~~~~~~G~~li~~G~~liv~~a~~~  130 (359)
                      +.+..+|++..|...-.-+.++.-.+.++.+..+|||++|..+|+|+++++.++.-......++
T Consensus       224 YsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~~~  287 (292)
T COG5006         224 YSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTARKP  287 (292)
T ss_pred             hHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccCCC
Confidence            4688999999999999999999999999999999999999999999999999998665544433

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=94.43  E-value=0.4  Score=46.30  Aligned_cols=86  Identities=21%  Similarity=0.292  Sum_probs=64.2

Q ss_pred             hHHHHH-HHHHHHHHHHHHHHhccchhhhhhhhhccCceeecchhHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHH
Q 018191          213 PDTWFF-MLVVAICVIMQMNYLNKESQMMLQALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFV  291 (359)
Q Consensus       213 ~~ty~~-l~~~v~~~l~Q~~~ln~~~~~~~~AL~~~~~~~v~Pv~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~  291 (359)
                      +..+.+ ++.++.-.+-|..-+ +       +.+.-..+...|+...+--+.+.+.|+++|+||...+  ++..=.++++
T Consensus        42 ~~~~~~~~lsG~~W~iGq~~qf-~-------s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~--~~~~G~~Al~  111 (269)
T PF06800_consen   42 GTSFIVAFLSGAFWAIGQIGQF-K-------SFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTT--QKIIGFLALV  111 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH-H-------HHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcc--hHHHHHHHHH
Confidence            344443 344444466665544 4       6777888999999999999999999999999998643  6666667889


Q ss_pred             HHHHhhhhhcccCCCCC
Q 018191          292 VVLSGTILLHTTKDFER  308 (359)
Q Consensus       292 ~~~~Gv~lLs~~~~~~~  308 (359)
                      +++.|+++-+.+++.++
T Consensus       112 liiiGv~lts~~~~~~~  128 (269)
T PF06800_consen  112 LIIIGVILTSYQDKKSD  128 (269)
T ss_pred             HHHHHHHHhcccccccc
Confidence            99999998777665554

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=94.08  E-value=0.5  Score=39.38  Aligned_cols=78  Identities=21%  Similarity=0.182  Sum_probs=58.4

Q ss_pred             ccchHHHHHHHHHHHHHHHHHHHhccchhhhhhhhhccCceeecchhHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHH
Q 018191          210 LLYPDTWFFMLVVAICVIMQMNYLNKESQMMLQALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICG  289 (359)
Q Consensus       210 ~~~~~ty~~l~~~v~~~l~Q~~~ln~~~~~~~~AL~~~~~~~v~Pv~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G  289 (359)
                      |+.+.+++..++..   ..-.++|.+       |++.-|..+.+++-.-.=+..+.+.|.++|+|..+  +.    -..|
T Consensus        27 f~~~~~~il~~v~~---~~sf~~Ls~-------alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~--~~----~~~g   90 (106)
T COG2076          27 FTRLWPSILTIVGY---GLSFYLLSL-------ALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLS--LI----KLLG   90 (106)
T ss_pred             ccccchHHHHHHHH---HHHHHHHHH-------HHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCC--HH----HHHH
Confidence            56666665444332   223667778       99999999988888888889999999999999654  33    4467


Q ss_pred             HHHHHHhhhhhccc
Q 018191          290 FVVVLSGTILLHTT  303 (359)
Q Consensus       290 ~~~~~~Gv~lLs~~  303 (359)
                      ..++++|++.|...
T Consensus        91 l~LiiaGvi~Lk~~  104 (106)
T COG2076          91 LALILAGVIGLKLG  104 (106)
T ss_pred             HHHHHHHHHHhhhc
Confidence            78899999988654

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=94.02  E-value=0.3  Score=39.37  Aligned_cols=64  Identities=13%  Similarity=0.090  Sum_probs=31.6

Q ss_pred             ccchHHHHHHHHHHHHHHHHHHHhccchhhhhhhhhccCceeecchhHHHHHHHHHHHHHHHhcccCCCCHHHHHH
Q 018191          210 LLYPDTWFFMLVVAICVIMQMNYLNKESQMMLQALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIIS  285 (359)
Q Consensus       210 ~~~~~ty~~l~~~v~~~l~Q~~~ln~~~~~~~~AL~~~~~~~v~Pv~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~  285 (359)
                      ++++.++...++   +...-.+++.+       |+++-|.++.+|+....=+....+.|..+|+|..+  +.++..
T Consensus        26 ~~~~~~~~~~~~---~~~~s~~~l~~-------al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s--~~~~~g   89 (93)
T PF00893_consen   26 FTQLIPTILAVV---GYGLSFYFLSL-------ALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLS--LSKWLG   89 (93)
T ss_dssp             --------HHHH---HHHHHHHHHHH-------HH-------HHHHHHHHHHHHHHHHHHHHH----------HHH
T ss_pred             hcchhhHHHHHH---HHHHHHHHHHH-------HHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCC--HHHHhh
Confidence            555555544332   44444678889       99999999999999988889999999999999654  444443

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=93.32  E-value=1  Score=37.08  Aligned_cols=57  Identities=25%  Similarity=0.318  Sum_probs=42.9

Q ss_pred             hhhccCceeecchhHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHhhhhhcccCCCC
Q 018191          243 ALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDFE  307 (359)
Q Consensus       243 AL~~~~~~~v~Pv~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~~~~~Gv~lLs~~~~~~  307 (359)
                      |+++.+ ..+.|+ +...++++.+.|.++|+|.  .++.    ...|.+++.+|++++..++...
T Consensus        55 a~~~~~-~~v~~i-~~~~pi~~~ll~~~~~~er--~~~~----~~~a~~l~~~Gv~li~~~~~~~  111 (113)
T PF13536_consen   55 ALSYAP-ALVAAI-FSLSPIFTALLSWLFFKER--LSPR----RWLAILLILIGVILIAWSDLTG  111 (113)
T ss_pred             HHHhCc-HHHHHH-HHHHHHHHHHHHHHHhcCC--CCHH----HHHHHHHHHHHHHHHhhhhccc
Confidence            888888 455654 5569999999999999994  4444    3456778889999988776544

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=92.26  E-value=2.9  Score=40.71  Aligned_cols=78  Identities=18%  Similarity=0.276  Sum_probs=56.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhc-hhhhhhchhhHHHHHHHHHHHHHhcCCCCccchhhHHHHhhhhheeeeecCCCC
Q 018191           54 PLWWVGMAIMIVGEVANFVAYAFA-PAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQES  131 (359)
Q Consensus        54 p~W~~G~~l~~~g~~~~~~Al~~a-p~slv~Pl~a~~li~~~ila~~~L~e~l~~~~~~G~~li~~G~~liv~~a~~~~  131 (359)
                      +.|..=..++..-++.|=.|+.|. |.-+=.=+=+-+++.|.+++..++|.|-+.+++..++++.+|+++.-.+..++.
T Consensus        65 k~Y~i~V~mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~  143 (330)
T KOG1583|consen   65 KDYAITVAMFFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDG  143 (330)
T ss_pred             hhhheehheeeeeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcch
Confidence            345444455555566676677653 222222245778999999999999999999999999999999998877765543

>TIGR00803 nst UDP-galactose transporter

Probab=92.04  E-value=0.5  Score=43.46  Aligned_cols=116  Identities=16%  Similarity=0.192  Sum_probs=80.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhc-------------------CcccCC--cccccc--cchhHHHHHHH
Q 018191            6 DNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAAS-------------------GVRAGV--GGFTYL--LEPLWWVGMAI   62 (359)
Q Consensus         6 ~~~iGv~LAl~ss~~~a~G~vlqk~~~~~~~~~~-------------------~~~~g~--~~~~~l--~~p~W~~G~~l   62 (359)
                      +.+.|+...+.+.++.+..-+.|+++.++.+...                   ..+++.  ......  ..+.+|.=.++
T Consensus        82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (222)
T TIGR00803        82 NPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVWIVGLL  161 (222)
T ss_pred             cHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHHHHHHH
Confidence            4567777777788888888888888755321000                   000000  001111  12334444455


Q ss_pred             HHHHHHHHHHHHhhchhhhhhchhhHHHHHHHHHHHHHhcCCCCccchhhHHHHhhhhh
Q 018191           63 MIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSI  121 (359)
Q Consensus        63 ~~~g~~~~~~Al~~ap~slv~Pl~a~~li~~~ila~~~L~e~l~~~~~~G~~li~~G~~  121 (359)
                      .+++.++-...+.+++.....=...+..+++.+++.++.+|+++...|.|+.++..|+.
T Consensus       162 ~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~  220 (222)
T TIGR00803       162 NVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATF  220 (222)
T ss_pred             HHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeE
Confidence            56666666667788888899999999999999999999999999999999999998865

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=91.93  E-value=5.3  Score=37.24  Aligned_cols=60  Identities=18%  Similarity=0.252  Sum_probs=54.1

Q ss_pred             HHHHHHHHhhchhhhhhchhhHHHHHHHHHHHHHhcCCCCccchhhHHHHhhhhheeeee
Q 018191           67 EVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIH  126 (359)
Q Consensus        67 ~~~~~~Al~~ap~slv~Pl~a~~li~~~ila~~~L~e~l~~~~~~G~~li~~G~~liv~~  126 (359)
                      +-....||.....+.+..+.+..-.|..+++...||+|+...+++..++.+.|++++...
T Consensus        67 NY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~  126 (290)
T KOG4314|consen   67 NYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYA  126 (290)
T ss_pred             CcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEec
Confidence            446678888999999999999999999999999999999999999999999999887653

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=91.52  E-value=16  Score=36.51  Aligned_cols=285  Identities=14%  Similarity=0.205  Sum_probs=146.3

Q ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHHHhhHH----H------------hhhhc---CcccCCccccccc----chhHHHH
Q 018191            3 FSKDNLKGFVLALLSSFFIGSSFIIKKKGLR----R------------AAAAS---GVRAGVGGFTYLL----EPLWWVG   59 (359)
Q Consensus         3 ~~~~~~iGv~LAl~ss~~~a~G~vlqk~~~~----~------------~~~~~---~~~~g~~~~~~l~----~p~W~~G   59 (359)
                      |....++|++...+++++.+.-.+=.||--.    .            .+-.-   ...   +..++++    +-+|+.-
T Consensus         1 m~~~ii~Gii~h~iGg~~~~sfy~P~kkvk~WsWEs~Wlv~gi~swli~P~~~a~l~ip---~~~~i~~~~~~~~l~~~~   77 (344)
T PF06379_consen    1 MNSAIILGIIFHAIGGFASGSFYVPFKKVKGWSWESYWLVQGIFSWLIVPWLWALLAIP---DFFSIYSATPASTLFWTF   77 (344)
T ss_pred             CCchHHHHHHHHHHHHHHhhhhccchhhcCCccHHHHHHHHHHHHHHHHHHHHHHHhCC---cHHHHHHhCChhHHHHHH
Confidence            5567889999999999998877766665211    0            00000   000   0111221    1222222


Q ss_pred             H--HHHHHHHHHHHHHHhhchhhhhhchh-hHHHHHHHHHHHHHhcC-------CCCccchhhHHHHhhhhheeeeecCC
Q 018191           60 M--AIMIVGEVANFVAYAFAPAVLVTPLG-ALSIIVSAVLAHFILHE-------KLPQLGILGCVMCIAGSIIIVIHAPQ  129 (359)
Q Consensus        60 ~--~l~~~g~~~~~~Al~~ap~slv~Pl~-a~~li~~~ila~~~L~e-------~l~~~~~~G~~li~~G~~liv~~a~~  129 (359)
                      +  ++-.+|.+..-.+..+.-.|+-+.+. .++.++..++-+.+.++       +-.+..++|++++.+|++++...+..
T Consensus        78 l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~  157 (344)
T PF06379_consen   78 LFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSM  157 (344)
T ss_pred             HHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHh
Confidence            1  11234555555566666666666542 45556666666666543       22335578999999999998777643


Q ss_pred             CCCCCCHHHHHHHhcChhHHHHHHHHHHHHHHHHHhh---cc------cCCCchhHHHHHH----HHhhhhHHHHHHHHH
Q 018191          130 ESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHF---AP------RCGNTNALVFIGI----CSLMGSLSVMSVKAL  196 (359)
Q Consensus       130 ~~~~~s~~el~~~~~~~~fl~y~~~~~~~~~~li~~~---~~------r~g~~~~~~y~~i----~gl~g~~tvl~~K~v  196 (359)
                      .++..+. |-.+.-- ..-+.-+++..+.....-+-.   .|      ..|...  .|...    --+.||+.+-..=++
T Consensus       158 Ke~~~~~-~~~efn~-~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~--l~~~l~~~vvv~~GGf~tN~~yc~  233 (344)
T PF06379_consen  158 KEKELGE-EAKEFNF-KKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNP--LYANLPVYVVVLWGGFITNLIYCL  233 (344)
T ss_pred             hhhhhcc-chhhhhh-hhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCc--HHHhCchhhhhhhhHHHHHHHHHH
Confidence            3222221 1111111 111222222222221111111   11      112111  11111    113444443333333


Q ss_pred             HHHHH-HhhcCCcccc---ch--HHHHHHHHHHHHHHHHHHHhccchhhhhhhhhccC--ceeecchhHHHHHHHHHHHH
Q 018191          197 GTSLK-LTFEGKNQLL---YP--DTWFFMLVVAICVIMQMNYLNKESQMMLQALDTFN--TAVVSPIYYVMFTSLTILAS  268 (359)
Q Consensus       197 ~~~l~-~~~~g~~~~~---~~--~ty~~l~~~v~~~l~Q~~~ln~~~~~~~~AL~~~~--~~~v~Pv~~v~~t~~~i~~G  268 (359)
                      -...+ .+.+.++.+.   ++  .-|++.+..-+.=..|..++.. .     +=+..|  ...--++...+..+++.+.|
T Consensus       234 ~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~lWy~qfffYg~-G-----~s~lg~~~~~~sW~i~ma~~vl~snvwG  307 (344)
T PF06379_consen  234 ILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGVLWYSQFFFYGM-G-----ESKLGASGPFSSWAIHMALIVLFSNVWG  307 (344)
T ss_pred             HHHhhcCCCccccccccccchhHHHHHHHHHHHHHHHHHHHHHHH-H-----HHHhcCccccHHHHHHHHHHHHHHHHHH
Confidence            32222 1121111221   22  3467777677778889888866 1     111222  23456677777777777777


Q ss_pred             HHHhcccCCCCHHHHHHHHHHHHHHHHhhhhhc
Q 018191          269 VIMFKDWDGQTAASIISEICGFVVVLSGTILLH  301 (359)
Q Consensus       269 ~i~f~E~~~~~~~~~~~~~~G~~~~~~Gv~lLs  301 (359)
                       +.++||++.+......+.+|+++++..++++.
T Consensus       308 -l~lkEWKg~s~kt~~vl~~G~~vlI~s~~ivG  339 (344)
T PF06379_consen  308 -LILKEWKGASKKTIRVLVLGIAVLILSVVIVG  339 (344)
T ss_pred             -HHHHHhccCCcccHHHHHHHHHHHHHHHHHHh
Confidence             67899999998888889999999998888764

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=91.47  E-value=0.27  Score=39.76  Aligned_cols=67  Identities=13%  Similarity=0.280  Sum_probs=48.5

Q ss_pred             HHHHHHHHHHHHhccchhhhhhhhhccCceeecchhHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHhhhhh
Q 018191          221 VVAICVIMQMNYLNKESQMMLQALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILL  300 (359)
Q Consensus       221 ~~v~~~l~Q~~~ln~~~~~~~~AL~~~~~~~v~Pv~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~~~~~Gv~lL  300 (359)
                      ..+.+...-....++       |+++.+++.+.++.+ ..++.+.+.|.++++|..  ++.    ...|.++++.|++++
T Consensus        59 ~~~~~~~~~~~~~~~-------a~~~~~~~~~~~~~~-~~pv~~~i~~~~~~~e~~--~~~----~~~g~~l~~~g~~l~  124 (126)
T PF00892_consen   59 LGLLGTALAYLLYFY-------ALKYISASIVSILQY-LSPVFAAILGWLFLGERP--SWR----QIIGIILIIIGVVLI  124 (126)
T ss_pred             hhccceehHHHHHHH-------HHHhcchhHHHHHHH-HHHHHHHHHHHHHcCCCC--CHH----HHHHHHHHHHHHHHH
Confidence            333333333455677       999999999998877 799999999999999964  343    456666777777765


Q ss_pred             c
Q 018191          301 H  301 (359)
Q Consensus       301 s  301 (359)
                      .
T Consensus       125 ~  125 (126)
T PF00892_consen  125 S  125 (126)
T ss_pred             H
Confidence            3

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG4831 consensus Unnamed protein [Function unknown]

Probab=90.41  E-value=0.38  Score=40.09  Aligned_cols=77  Identities=19%  Similarity=0.330  Sum_probs=64.3

Q ss_pred             ccccccchhHHHHHHHHHHHHHHHHHHHhhchhhhhhchh-hHHHHHHHHHHHHHhcCCCCc-cchhhHHHHhhhhheee
Q 018191           47 GFTYLLEPLWWVGMAIMIVGEVANFVAYAFAPAVLVTPLG-ALSIIVSAVLAHFILHEKLPQ-LGILGCVMCIAGSIIIV  124 (359)
Q Consensus        47 ~~~~l~~p~W~~G~~l~~~g~~~~~~Al~~ap~slv~Pl~-a~~li~~~ila~~~L~e~l~~-~~~~G~~li~~G~~liv  124 (359)
                      .+.++.++..|+=+.+---|..+.+.-|+-+|.++.-|+. ++++.|+++++..+ +|+... +-++|+.+++.|+.+.+
T Consensus        46 ~~tl~l~w~Y~iPFllNqcgSaly~~tLa~a~islavpv~nsltfafta~~G~~L-GE~~~g~~a~lGt~liv~Gi~Lci  124 (125)
T KOG4831|consen   46 MKTLFLNWEYLIPFLLNQCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKAL-GEETQGGLALLGTSLIVFGIWLCI  124 (125)
T ss_pred             HHHHHHhHHHHHHHHHHHhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHh-ccccccceeehhhhHHhhhhhhee
Confidence            4567778899999999999999999999999999999985 67889999988765 666654 55789999999987654

>COG1742 Uncharacterized conserved protein [Function unknown]

Probab=89.58  E-value=1.8  Score=35.92  Aligned_cols=48  Identities=19%  Similarity=0.412  Sum_probs=39.0

Q ss_pred             hhhchhhHHHHHHHHHHHHHhcCCCCccchhhHHHHhhhhheeeeecCC
Q 018191           81 LVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQ  129 (359)
Q Consensus        81 lv~Pl~a~~li~~~ila~~~L~e~l~~~~~~G~~li~~G~~liv~~a~~  129 (359)
                      +-+.-|.+-++.+++-....-|.+.+++||+|.+.|.+|+.++ .++|.
T Consensus        60 vYAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vi-l~~pR  107 (109)
T COG1742          60 VYAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVI-LFGPR  107 (109)
T ss_pred             HHHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeee-EeCCC
Confidence            3455677778888888999999999999999999999996544 55654

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=88.36  E-value=1.5  Score=43.36  Aligned_cols=62  Identities=16%  Similarity=0.277  Sum_probs=56.0

Q ss_pred             HHHHHHHHHHHhhchhhhhhchhhHHHHHHHHHHHHHhcCCCCccchhhHHHHhhhhheeee
Q 018191           64 IVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVI  125 (359)
Q Consensus        64 ~~g~~~~~~Al~~ap~slv~Pl~a~~li~~~ila~~~L~e~l~~~~~~G~~li~~G~~liv~  125 (359)
                      .+|-++.-.++...|.+..|-+-++..++++++++++.+|+.++..+.-...++.|+.+-..
T Consensus        94 ~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~  155 (316)
T KOG1441|consen   94 CISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASV  155 (316)
T ss_pred             HHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeee
Confidence            46667778899999999999999999999999999999999999999988888888886544

>PRK02237 hypothetical protein; Provisional

Probab=88.28  E-value=2.4  Score=35.39  Aligned_cols=47  Identities=17%  Similarity=0.355  Sum_probs=39.0

Q ss_pred             hhchhhHHHHHHHHHHHHHhcCCCCccchhhHHHHhhhhheeeeecCC
Q 018191           82 VTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQ  129 (359)
Q Consensus        82 v~Pl~a~~li~~~ila~~~L~e~l~~~~~~G~~li~~G~~liv~~a~~  129 (359)
                      -+--|.+=++.+.+-...+-|+|.++.|++|..+|.+|+.++. ++|.
T Consensus        62 YAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~-~~pR  108 (109)
T PRK02237         62 YAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIM-YAPR  108 (109)
T ss_pred             HHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhe-ecCC
Confidence            3445677788888899999999999999999999999998764 5553

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=85.46  E-value=3.6  Score=34.66  Aligned_cols=51  Identities=18%  Similarity=0.261  Sum_probs=40.4

Q ss_pred             hhhccCceeecchhHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHhhhh
Q 018191          243 ALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTIL  299 (359)
Q Consensus       243 AL~~~~~~~v~Pv~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~~~~~Gv~l  299 (359)
                      .|.+.|-++.+|+.+..--+++++.|..+.+|..+-.      -..|+.++++|+.+
T Consensus        61 ~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~------~~~G~~Li~~Gv~L  111 (113)
T PF10639_consen   61 LLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRR------TWLGMALILAGVAL  111 (113)
T ss_pred             HHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchh------HHHHHHHHHcCeee
Confidence            6777999999999988888899999977777754321      35778888888865

Many members are annotated as potential transmembrane proteins.

>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]

Probab=83.91  E-value=29  Score=36.43  Aligned_cols=32  Identities=25%  Similarity=0.313  Sum_probs=23.5

Q ss_pred             HhhcccCCCchhHHHHHHHHhhhhHHHHHHHH
Q 018191          164 FHFAPRCGNTNALVFIGICSLMGSLSVMSVKA  195 (359)
Q Consensus       164 ~~~~~r~g~~~~~~y~~i~gl~g~~tvl~~K~  195 (359)
                      ...+.|+|+|+.+....+-+++++......|.
T Consensus        81 ~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~  112 (485)
T KOG0569|consen   81 GLLADRFGRKNALLLSNLLAVLAALLMGLSKS  112 (485)
T ss_pred             HHHHHhhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence            45678999998887777777777776666664

>PRK13499 rhamnose-proton symporter; Provisional

Probab=83.71  E-value=31  Score=34.61  Aligned_cols=73  Identities=15%  Similarity=0.106  Sum_probs=56.2

Q ss_pred             HHHHHHHHHHHhccchhhhhhhhhccCceeecchhHHHHHHHHHHHHHHHhcccCC-CCHHHHHHHHHHHHHHHHhhhhh
Q 018191          222 VAICVIMQMNYLNKESQMMLQALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDG-QTAASIISEICGFVVVLSGTILL  300 (359)
Q Consensus       222 ~v~~~l~Q~~~ln~~~~~~~~AL~~~~~~~v~Pv~~v~~t~~~i~~G~i~f~E~~~-~~~~~~~~~~~G~~~~~~Gv~lL  300 (359)
                      ++.-.+-|+.+. +       +.+.--.+.-.|+..-.-.+.+.+.+.++|+||.. .+..+...-..|.++++.|+.+-
T Consensus        80 G~~W~iG~i~~~-~-------s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~  151 (345)
T PRK13499         80 GALWGIGGITYG-L-------TMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIV  151 (345)
T ss_pred             HHHHHhhhhhHH-H-------HHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHH
Confidence            344456665554 3       67777788889999999999999999999999972 12235555889999999999998


Q ss_pred             cc
Q 018191          301 HT  302 (359)
Q Consensus       301 s~  302 (359)
                      +.
T Consensus       152 s~  153 (345)
T PRK13499        152 GR  153 (345)
T ss_pred             HH
Confidence            87

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=83.38  E-value=0.91  Score=43.43  Aligned_cols=86  Identities=21%  Similarity=0.275  Sum_probs=64.0

Q ss_pred             ccchHHHHHHHHH-HHHHHHHHHHhccchhhhhhhhhccCceeecchhHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHH
Q 018191          210 LLYPDTWFFMLVV-AICVIMQMNYLNKESQMMLQALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEIC  288 (359)
Q Consensus       210 ~~~~~ty~~l~~~-v~~~l~Q~~~ln~~~~~~~~AL~~~~~~~v~Pv~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~  288 (359)
                      ..+++.+.+-++. ..=.+-|.+-+ |       |.+.-..+...|+..-+.-+.+-+.|++.|+||.+  +.+.+.=..
T Consensus        53 ~~T~~~~iv~~isG~~Ws~GQ~~Qf-k-------a~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t--~~~~IlG~i  122 (288)
T COG4975          53 ELTLTIFIVGFISGAFWSFGQANQF-K-------AIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTT--PTQIILGFI  122 (288)
T ss_pred             ccchhhHHHHHHhhhHhhhhhhhhh-h-------heeeeeeeccccccchhhHhhceeeeEEEEeccCc--chhHHHHHH
Confidence            3445555443333 22366676665 5       67777888899999999999999999999999986  457777778


Q ss_pred             HHHHHHHhhhhhcccCC
Q 018191          289 GFVVVLSGTILLHTTKD  305 (359)
Q Consensus       289 G~~~~~~Gv~lLs~~~~  305 (359)
                      +.++++.|+++=+..++
T Consensus       123 AliliviG~~lTs~~~~  139 (288)
T COG4975         123 ALILIVIGIYLTSKQDR  139 (288)
T ss_pred             HHHHHHHhheEeeeecc
Confidence            88899999998665554

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=82.82  E-value=0.78  Score=43.86  Aligned_cols=222  Identities=14%  Similarity=0.227  Sum_probs=129.3

Q ss_pred             cccchhHHHHHHHH---HHHHHHHHHHHhhchhhhhhchh-hHHHHHHHHHHHHHhcCCCCccch----hhHHHHhhhhh
Q 018191           50 YLLEPLWWVGMAIM---IVGEVANFVAYAFAPAVLVTPLG-ALSIIVSAVLAHFILHEKLPQLGI----LGCVMCIAGSI  121 (359)
Q Consensus        50 ~l~~p~W~~G~~l~---~~g~~~~~~Al~~ap~slv~Pl~-a~~li~~~ila~~~L~e~l~~~~~----~G~~li~~G~~  121 (359)
                      .++-..|..|++--   .+|+..||-|......|...|+. +..++-+.+++.+.+||=-+..++    ++.+++++|..
T Consensus        53 ~~T~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~  132 (288)
T COG4975          53 ELTLTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIY  132 (288)
T ss_pred             ccchhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhhe
Confidence            34445677777544   47889999999999999999996 678999999999999998887764    46788888988


Q ss_pred             eeeeecCCCCCCCCHHHHHHHhcChhHHHHHHHHHHH--HHHHHHhhcccCCCchhHHHHHHHHhhhhHHHHHHHHHHHH
Q 018191          122 IIVIHAPQESPITSVQEIWSLATQPAFLLYVASVIVL--VFILIFHFAPRCGNTNALVFIGICSLMGSLSVMSVKALGTS  199 (359)
Q Consensus       122 liv~~a~~~~~~~s~~el~~~~~~~~fl~y~~~~~~~--~~~li~~~~~r~g~~~~~~y~~i~gl~g~~tvl~~K~v~~~  199 (359)
                      +-..-.+.+++..+++.+.+          ......+  +....|.+..+.     +-       +.+.++++-++++-.
T Consensus       133 lTs~~~~~nk~~~~~~n~kk----------gi~~L~iSt~GYv~yvvl~~~-----f~-------v~g~saiLPqAiGMv  190 (288)
T COG4975         133 LTSKQDRNNKEEENPSNLKK----------GIVILLISTLGYVGYVVLFQL-----FD-------VDGLSAILPQAIGMV  190 (288)
T ss_pred             EeeeeccccccccChHhhhh----------heeeeeeeccceeeeEeeecc-----cc-------ccchhhhhHHHHHHH
Confidence            87776655555555444333          1111100  000001111111     00       333444444443321


Q ss_pred             H---HHhhcCCccccchHHHHHHHHHHHHHHHHHHHhccchhhhhhhhhccCceeecchhHHHHHHHHHHHHHHHhcccC
Q 018191          200 L---KLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKESQMMLQALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWD  276 (359)
Q Consensus       200 l---~~~~~g~~~~~~~~ty~~l~~~v~~~l~Q~~~ln~~~~~~~~AL~~~~~~~v~Pv~~v~~t~~~i~~G~i~f~E~~  276 (359)
                      +   .......+-..+-.+|.-++.++.-..--+.++-.       +=+.+-++- ..+-|.. .+.+.++|..+++|.+
T Consensus       191 ~~ali~~~~~~~~~~~K~t~~nii~G~~Wa~GNl~ml~a-------~~~~GvAt~-FSlSQlg-ViisTiGGIl~L~ekK  261 (288)
T COG4975         191 IGALILGFFKMEKRFNKYTWLNIIPGLIWAIGNLFMLLA-------AQKVGVATS-FSLSQLG-VIISTIGGILFLGEKK  261 (288)
T ss_pred             HHHHHHhhcccccchHHHHHHHHhhHHHHHhhHHHHHHh-------hhhhceeee-eeHhhhe-eeeeecceEEEEeccC
Confidence            1   11222233445556666666555443333333322       111121111 0111111 1236778999999977


Q ss_pred             CCCHHHHHHHHHHHHHHHHhhhhhcccC
Q 018191          277 GQTAASIISEICGFVVVLSGTILLHTTK  304 (359)
Q Consensus       277 ~~~~~~~~~~~~G~~~~~~Gv~lLs~~~  304 (359)
                        +..++.....|.++++.|.++|.--|
T Consensus       262 --tkkEm~~v~iGiilivvgai~lg~~K  287 (288)
T COG4975         262 --TKKEMVYVIIGIILIVVGAILLGIAK  287 (288)
T ss_pred             --chhhhhhhhhhHHHHHHHhhhhheec
Confidence              47799999999999999999887543

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=81.61  E-value=52  Score=31.67  Aligned_cols=210  Identities=16%  Similarity=0.186  Sum_probs=106.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhchhhhhhchhhHH----HHHHHHHHHHHhcCCCCccchhhHHHHhhhhheeeeecCC-
Q 018191           55 LWWVGMAIMIVGEVANFVAYAFAPAVLVTPLGALS----IIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQ-  129 (359)
Q Consensus        55 ~W~~G~~l~~~g~~~~~~Al~~ap~slv~Pl~a~~----li~~~ila~~~L~e~l~~~~~~G~~li~~G~~liv~~a~~-  129 (359)
                      ...+--+.|.++.+.+=-|+.+.|-    |-..++    -+=..+++..+.|.+-++++...+.+|++|++++..--++ 
T Consensus        87 ~YaAcs~sYLlAMVssN~Alq~vpY----PTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv  162 (337)
T KOG1580|consen   87 MYAACSASYLLAMVSSNQALQYVPY----PTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKV  162 (337)
T ss_pred             HHHHHHHHHHHHHHhccchhcccCC----cHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhcccccc
Confidence            3344445555666665566766663    322222    2334567778889999999999999999999998775322 


Q ss_pred             ---CCCCCCHHHHHHHhcChhHHHHHHHHH-HHHHHHHH--hhcccCCCchhHHHHHH-HHhhhhHHHHHHHHHHHHHHH
Q 018191          130 ---ESPITSVQEIWSLATQPAFLLYVASVI-VLVFILIF--HFAPRCGNTNALVFIGI-CSLMGSLSVMSVKALGTSLKL  202 (359)
Q Consensus       130 ---~~~~~s~~el~~~~~~~~fl~y~~~~~-~~~~~li~--~~~~r~g~~~~~~y~~i-~gl~g~~tvl~~K~v~~~l~~  202 (359)
                         |+++.-..|+.-.+         .+.. ......--  +.+.+++..+++.|.-. +.+.=|...+.+--+=+.+. 
T Consensus       163 ~g~e~~t~g~GElLL~l---------SL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~y-  232 (337)
T KOG1580|consen  163 GGAEDKTFGFGELLLIL---------SLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFY-  232 (337)
T ss_pred             CCCcccccchHHHHHHH---------HHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHH-
Confidence               22333333432110         0000 00000000  11223344556655433 33322222222111111110 


Q ss_pred             hhcCCccccchHHHHHHHHH-HHHHHHHHHHhccchhhhhhhhhccCceeecchhHHHHHHHHHHHHHHHhcccCCCCHH
Q 018191          203 TFEGKNQLLYPDTWFFMLVV-AICVIMQMNYLNKESQMMLQALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAA  281 (359)
Q Consensus       203 ~~~g~~~~~~~~ty~~l~~~-v~~~l~Q~~~ln~~~~~~~~AL~~~~~~~v~Pv~~v~~t~~~i~~G~i~f~E~~~~~~~  281 (359)
                       +    .-+||..|.=+... +.+++.| +|.=+       -...|.+.. ..+....=-+++|++++++|+...  ++.
T Consensus       233 -F----~~RhP~~~~~l~l~ai~s~LGQ-~fIF~-------tv~~FgPLt-CSivTTTRKfFTil~SVllf~npl--s~r  296 (337)
T KOG1580|consen  233 -F----VQRHPYVFWDLTLLAIASCLGQ-WFIFK-------TVEEFGPLT-CSIVTTTRKFFTILISVLLFNNPL--SGR  296 (337)
T ss_pred             -H----HHhccHHHHHHHHHHHHHHhhh-HHHHH-------HHHHhCCee-EEEEeehHHHHHHHHHHHHhcCcC--cHH
Confidence             0    12467665544444 4445554 55556       566666544 333344456778999999999854  566


Q ss_pred             HHHHHHHHHHHHHHhhh
Q 018191          282 SIISEICGFVVVLSGTI  298 (359)
Q Consensus       282 ~~~~~~~G~~~~~~Gv~  298 (359)
                      ||.    |.++++.+..
T Consensus       297 Qwl----gtvlVF~aL~  309 (337)
T KOG1580|consen  297 QWL----GTVLVFSALT  309 (337)
T ss_pred             HHH----HHHHHHHHhh
Confidence            664    4455554443

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=81.54  E-value=3.7  Score=40.82  Aligned_cols=52  Identities=21%  Similarity=0.304  Sum_probs=43.2

Q ss_pred             HHHhhchhhhhhchhhHHHHHHHHHHHHHhcCCCCccchhhHHHHhhhhhee
Q 018191           72 VAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIII  123 (359)
Q Consensus        72 ~Al~~ap~slv~Pl~a~~li~~~ila~~~L~e~l~~~~~~G~~li~~G~~li  123 (359)
                      ..+...+..-..=.+.+--++..+++.++++|+++..+++|+++++.|+.+.
T Consensus       295 ~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lY  346 (350)
T PTZ00343        295 YCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLY  346 (350)
T ss_pred             HHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHH
Confidence            4555566666666667777899999999999999999999999999999754

>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function

Probab=80.48  E-value=2.3  Score=35.40  Aligned_cols=45  Identities=22%  Similarity=0.475  Sum_probs=38.1

Q ss_pred             hchhhHHHHHHHHHHHHHhcCCCCccchhhHHHHhhhhheeeeecC
Q 018191           83 TPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAP  128 (359)
Q Consensus        83 ~Pl~a~~li~~~ila~~~L~e~l~~~~~~G~~li~~G~~liv~~a~  128 (359)
                      +--|.+=++.+.+-...+-|+|.++.|++|..+|.+|+.++. ++|
T Consensus        61 AAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~-~~P  105 (107)
T PF02694_consen   61 AAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIIL-FAP  105 (107)
T ss_pred             HHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheE-ecC
Confidence            445677788888899999999999999999999999998774 444

; GO: 0016020 membrane

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	359
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.93
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.79
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	96.97
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	96.94

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.93  E-value=6.3e-09  Score=85.61  Aligned_cols=101  Identities=13%  Similarity=0.090  Sum_probs=86.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhHHHhhhhcCcccCCcccccccchhHHHHHHHHHHHHHHHHHHHhhchhhhhhch-hhHH
Q 018191           11 FVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMAIMIVGEVANFVAYAFAPAVLVTPL-GALS   89 (359)
Q Consensus        11 v~LAl~ss~~~a~G~vlqk~~~~~~~~~~~~~~g~~~~~~l~~p~W~~G~~l~~~g~~~~~~Al~~ap~slv~Pl-~a~~   89 (359)
                      -++-+++.++.+.|+.+.|++.       +         ..+.+.++.+.+++++++.+...++...|++.+.|+ .+++
T Consensus         4 ~l~l~~a~~~e~~~~~~lK~s~-------~---------~~~~~~~~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~   67 (110)
T 3b5d_A            4 YIYLGGAILAEVIGTTLMKFSE-------G---------FTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVG   67 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcc-------C---------cchHHHHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHH
Confidence            3455678888999999999861       1         113456678888999999999999999999999999 8999


Q ss_pred             HHHHHHHHHHHhcCCCCccchhhHHHHhhhhheeeeec
Q 018191           90 IIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHA  127 (359)
Q Consensus        90 li~~~ila~~~L~e~l~~~~~~G~~li~~G~~liv~~a  127 (359)
                      .+++.+++.+++||+++..+++|+.++++|++++...+
T Consensus        68 ~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           68 IVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            99999999999999999999999999999999875543

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.79  E-value=7.4e-09  Score=88.66  Aligned_cols=100  Identities=12%  Similarity=0.054  Sum_probs=69.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhhHHHhhhhcCcccCCcccccccchhHHHHHHHHHHHHHHHHHHHhhchhhhhhch-hhHHH
Q 018191           12 VLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMAIMIVGEVANFVAYAFAPAVLVTPL-GALSI   90 (359)
Q Consensus        12 ~LAl~ss~~~a~G~vlqk~~~~~~~~~~~~~~g~~~~~~l~~p~W~~G~~l~~~g~~~~~~Al~~ap~slv~Pl-~a~~l   90 (359)
                      ++-+++.++.+.|+.+.|++.     .           ..+.|.++.|++++++++.++..++...|++.+.|+ .+++.
T Consensus         5 l~Ll~ail~ev~~~~~lK~s~-----g-----------~~~~~~~~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~p   68 (137)
T 2i68_A            5 IYLGGAILAEVIGTTLMKFSE-----G-----------FTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGI   68 (137)
T ss_dssp             HHHHHHHHHHHHHHHHC----------------------------CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhc-----c-----------cchHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHH
Confidence            455678888999999999862     0           012355678999999999999999999999999999 89999


Q ss_pred             HHHHHHHHHHhcCCCCccchhhHHHHhhhhheeeeec
Q 018191           91 IVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHA  127 (359)
Q Consensus        91 i~~~ila~~~L~e~l~~~~~~G~~li~~G~~liv~~a  127 (359)
                      +++.+++.+++||+++..+++|++++++|++++....
T Consensus        69 v~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           69 VLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            9999999999999999999999999999999886543

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=96.97  E-value=0.0014  Score=55.79  Aligned_cols=68  Identities=19%  Similarity=0.260  Sum_probs=46.3

Q ss_pred             HHHHHHHHHhccchhhhhhhhhccCceeecchhHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHhhhhhccc
Q 018191          224 ICVIMQMNYLNKESQMMLQALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTT  303 (359)
Q Consensus       224 ~~~l~Q~~~ln~~~~~~~~AL~~~~~~~v~Pv~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~~~~~Gv~lLs~~  303 (359)
                      ++...-..++++       |+++.|.+.++|+....-++.+++.|.++|+|....  .    ..+|.+++++|++++.+.
T Consensus        38 ~~~~ls~~l~~~-------alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~--~----~~~Gi~LIi~GV~ll~~~  104 (137)
T 2i68_A           38 ICYCASFWLLAQ-------TLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDL--P----AIIGMMLICAGVLIINLL  104 (137)
T ss_dssp             HHHHHHHHHHHH-------HHC-----CHHHHHHHHHHHHHHHHHHHHHC------------CHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHH-------HHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCH--H----HHHHHHHHHHHHHHHhcC
Confidence            333444667788       999999999999977888999999999999996543  2    357888999999999865


Q ss_pred             C
Q 018191          304 K  304 (359)
Q Consensus       304 ~  304 (359)
                      +
T Consensus       105 ~  105 (137)
T 2i68_A          105 S  105 (137)
T ss_dssp             -
T ss_pred             C
Confidence            4

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=96.94  E-value=0.006  Score=49.55  Aligned_cols=67  Identities=18%  Similarity=0.246  Sum_probs=55.0

Q ss_pred             HHHHHHHHhccchhhhhhhhhccCceeecchhHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHhhhhhcccC
Q 018191          225 CVIMQMNYLNKESQMMLQALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTK  304 (359)
Q Consensus       225 ~~l~Q~~~ln~~~~~~~~AL~~~~~~~v~Pv~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~~~~~Gv~lLs~~~  304 (359)
                      +...-..++++       |+++.|.+.++|+....-++.+.+.|.++|+|..  ++.    -.+|.++++.|+++++..+
T Consensus        39 ~~~~~~~~~~~-------al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~--s~~----~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           39 CYCASFWLLAQ-------TLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRL--DLP----AIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHH-------HHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCC--CHH----HHHHHHHHHHHHHHHhcCC
Confidence            33344567788       9999999999999888889999999999999965  344    4578889999999998754

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00