Citrus Sinensis ID: 018219

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------36
Protein Sequence
MNMKAYIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLINIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGKRKDSLAADDEHKDGNMKTTADDKILEISTSTK
Secondary Structure (PSIPRED)
cccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHcccHHHHHHHHHHHHHccccEEccccccccccEEEEEccEEEEEEEccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHEEEHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccccHEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHccccHHccccccccccccccccccccc
Coil and Loop (DISEMBL)
MNMKAYIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYvlerkqrpkpsfAVMAKIFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKitsgrgraKVLGTIICVGGSLLFTLWRsgylfksvvekpliniynnnadhlrhhgkenwIKGSALILTSHIALSSWLILQAKVfkeypaplsmNTLICFFASLQTSFLALFfgrnptiwkldwNVQFLTVMYCGVLNSALVYYLQTWCIsvkgpvftamFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLwgkrkdslaaddehkdgnmkttaddkILEISTSTK
Flexible Loop (DISEMBL)
MNMKAYIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITsgrgrakvLGTIICVGGSLLFTLWRSGYLFKSVVEKPLINIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGKRKDslaaddehkdgnmkttaddkileiststk
Low Complexity Region (SEG)
MNMKAYIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLINIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGKRKDSLAADDEHKDGNMKTTADDKILEISTSTK
Disordered region (IsUnstruct)
****AYIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLINIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGK********************************
Disordered Region (DISOPRED)
****AYIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKP*******************WIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLW**********************************
Disordered Region (DISEMBL)
MNMKAYIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLINIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGKRKDSLAADDEHKDGNMKTTADDKILEISTSTK
Disordered Region (DISPRO)
*NMKAYIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVV********************ENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGKRKD*****************************
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MNMKAYIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLINIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGKRKDSLAADDEHKDGNMKTTADDKILEISTSTK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	359	2.2.26 [Sep-21-2011]
Q9FL41	402	WAT1-related protein At5g	yes	no	0.922	0.823	0.365	7e-65
O80638	374	WAT1-related protein At2g	no	no	0.986	0.946	0.361	9e-65
Q9ZUS1	380	WAT1-related protein At2g	no	no	0.944	0.892	0.360	1e-64
Q9SUF1	384	WAT1-related protein At4g	no	no	0.891	0.833	0.377	1e-62
Q94AP3	389	Protein WALLS ARE THIN 1	no	no	0.949	0.876	0.371	3e-62
Q9LV20	383	WAT1-related protein At3g	no	no	0.896	0.840	0.377	6e-62
F4IJ08	394	WAT1-related protein At2g	no	no	0.899	0.819	0.354	3e-61
F4HZQ7	389	WAT1-related protein At1g	no	no	0.938	0.866	0.360	4e-61
Q9FGG3	359	WAT1-related protein At5g	no	no	0.933	0.933	0.363	1e-60
Q501F8	373	WAT1-related protein At4g	no	no	0.924	0.890	0.352	1e-59

>sp|Q9FL41|WTR38_ARATH WAT1-related protein At5g07050 OS=Arabidopsis thaliana GN=At5g07050 PE=2 SV=1

 Score =  248 bits (632), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 130/356 (36%), Positives = 204/356 (57%), Gaps = 25/356 (7%)

Query: 8   PYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPS 67
           PY A+I  QF +AG NI+ KI+L  G++  V VVYRH IA  ++ PFA+  ERK +PK +
Sbjct: 18  PYFAMISLQFGYAGMNIITKISLNTGMSHYVLVVYRHAIATAVIAPFAFFFERKAQPKIT 77

Query: 68  FAVMAKIFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKIT 127
           F++  ++F+L LLG  I  N YY+G+ Y SPT + A+ N++P+ TF+LA L  ME + + 
Sbjct: 78  FSIFMQLFILGLLGPVIDQNFYYMGLKYTSPTFSCAMSNMLPAMTFILAVLFRMEMLDLK 137

Query: 128 SGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLINIYNNNADHLRHHGKE----- 182
               +AK+ GT++ V G++L T+++           P++ ++     H++          
Sbjct: 138 KLWCQAKIAGTVVTVAGAMLMTIYKG----------PIVELFWTKYMHIQDSSHANTTSS 187

Query: 183 -------NWIKGSALILTSHIALSSWLILQAKVFKEYPA-PLSMNTLICFFASLQTSFLA 234
                   ++KGS L++ + +A +S  +LQAK+ K Y    LS+ TLICF  +LQ   + 
Sbjct: 188 KNSSSDKEFLKGSILLIFATLAWASLFVLQAKILKTYAKHQLSLTTLICFIGTLQAVAVT 247

Query: 235 LFFGRNPTIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVA 294
                NP+ W++ W++  L   Y G++ S++ YY+Q   +  +GPVF   F P+ +VIVA
Sbjct: 248 FVMEHNPSAWRIGWDMNLLAAAYSGIVASSISYYVQGIVMKKRGPVFATAFSPLMMVIVA 307

Query: 295 LFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGKRKDSLAADDE--HKDGNMKTTAD 348
           +      AE++ L  +IGA  IV GLY VLWGK+K++     E    D N K T D
Sbjct: 308 VMGSFVLAEKIFLGGVIGAVLIVIGLYAVLWGKQKENQVTICELAKIDSNSKVTED 363

Arabidopsis thaliana (taxid: 3702)

>sp|O80638|WTR14_ARATH WAT1-related protein At2g39510 OS=Arabidopsis thaliana GN=At2g39510 PE=2 SV=1

 Score =  247 bits (631), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 130/360 (36%), Positives = 208/360 (57%), Gaps = 6/360 (1%)

Query: 1   MNMKAYIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLER 60
           M +K + P++ ++  QF +AG +I+ K AL +G++  V   YRH++A + + PFAY L+R
Sbjct: 1   MALKTWKPFITVVSLQFGYAGLSIIAKFALNQGMSPHVLASYRHIVATIFIAPFAYFLDR 60

Query: 61  KQRPKPSFAVMAKIFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLG 120
           K RPK + ++  KI +L LL  TI  N+YY GM Y S T   A+ NV+P+F F++A++  
Sbjct: 61  KIRPKMTLSIFFKILLLGLLEPTIDQNLYYTGMKYTSATFTAAMTNVLPAFAFIMAWIFR 120

Query: 121 MEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLINIYNNNADHLRHHG 180
           +EKV +     +AK+LGTI+ VGG++L T+ +       ++  P  N ++ + D      
Sbjct: 121 LEKVNVKKIHSQAKILGTIVTVGGAMLMTVVKG-----PLIPLPWANPHDIHQDSSNTGV 175

Query: 181 KENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGR- 239
           K++  KG++LI    I  + ++ LQA   K YP  LS+   ICF  S++++ +ALF  R 
Sbjct: 176 KQDLTKGASLIAIGCICWAGFINLQAITLKSYPVELSLTAYICFLGSIESTIVALFIERG 235

Query: 240 NPTIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSII 299
           NP+ W +  + + L  +Y GV+ S + YY+Q   +  +GPVF   F P+ +VIVA+   I
Sbjct: 236 NPSAWAIHLDSKLLAAVYGGVICSGIGYYVQGVIMKTRGPVFVTAFNPLSMVIVAILGSI 295

Query: 300 AFAERLHLSSLIGAFFIVAGLYCVLWGKRKDSLAADDEHKDGNMKTTADDKILEISTSTK 359
             AE + L  ++GA  IV GLY VLWGK KD  ++     D  +  +    +L    + K
Sbjct: 296 ILAEVMFLGRILGAIVIVLGLYSVLWGKSKDEPSSSFSDMDKELPLSTPQIVLPSKANAK 355

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZUS1|WTR13_ARATH WAT1-related protein At2g37460 OS=Arabidopsis thaliana GN=At2g37460 PE=2 SV=1

 Score =  247 bits (630), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 134/372 (36%), Positives = 215/372 (57%), Gaps = 33/372 (8%)

Query: 3   MKAYIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQ 62
           M+   P+++++  Q   AG +IL K  L +G++  V VVYRH +A +++ PFA+  ++K 
Sbjct: 10  MEKARPFISMVVLQVGLAGMDILSKAVLNKGMSNYVLVVYRHAVATIVMAPFAFYFDKKV 69

Query: 63  RPKPSFAVMAKIFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGME 122
           RPK +  +  KI +L LL   I  N+YY+GM Y + T ATA+ NV+P+ TF+LA++ G+E
Sbjct: 70  RPKMTLMIFFKISLLGLLEPVIDQNLYYLGMKYTTATFATAMYNVLPAITFVLAYIFGLE 129

Query: 123 KVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLINIY-------NNNADH 175
           +VK+   R   KV+GT+  VGG+++ TL          V+ P+++++       +N A  
Sbjct: 130 RVKLRCIRSTGKVVGTLATVGGAMIMTL----------VKGPVLDLFWTKGVSAHNTAGT 179

Query: 176 LRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLAL 235
             H      IKG+ L+     + + ++ILQA   + YPA LS+   IC   +++ + +AL
Sbjct: 180 DIHSA----IKGAVLVTIGCFSYACFMILQAITLRTYPAELSLTAWICLMGTIEGTAVAL 235

Query: 236 FFGR-NPTIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVA 294
              + NP+ W + W+ + LT  Y G++ SAL YY+    +  +GPVF   F P+ ++IVA
Sbjct: 236 VMEKGNPSAWAIGWDTKLLTATYSGIVCSALAYYVGGVVMKTRGPVFVTAFSPLCMIIVA 295

Query: 295 LFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGKRKD-----SLAADDEHKD------GNM 343
           + S I FAE+++L  ++GA  I AGLY V+WGK KD     +L  DDE         GN 
Sbjct: 296 IMSTIIFAEQMYLGRVLGAVVICAGLYLVIWGKGKDYKYNSTLQLDDESAQPKLELSGNG 355

Query: 344 KTTADDKILEIS 355
           K   D +++ IS
Sbjct: 356 KDNVDHEVITIS 367

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SUF1|WTR31_ARATH WAT1-related protein At4g08290 OS=Arabidopsis thaliana GN=At4g08290 PE=2 SV=1

 Score =  240 bits (613), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 122/323 (37%), Positives = 199/323 (61%), Gaps = 3/323 (0%)

Query: 8   PYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPS 67
           PY+ +IF QF  AG+ I++   L +G N+ V +VYR+++A L+L PFA + ERK RPK +
Sbjct: 13  PYLLMIFLQFGAAGTYIVIMATLNQGQNRYVVIVYRNLVAALVLAPFALIFERKVRPKMT 72

Query: 68  FAVMAKIFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKIT 127
            +V+ KI  L  L   +     Y+GM+  S T  +A+ N++PS TF++A++L MEKV I 
Sbjct: 73  LSVLWKIMALGFLEPVLDQGFGYLGMNMTSATYTSAIMNILPSVTFIIAWILRMEKVNIA 132

Query: 128 SGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLINIYNNNADHLRHHGKENWIKG 187
             R +AK++GT++ +GG+L+ TL++ G L       P ++  N + ++ + H   NW+ G
Sbjct: 133 EVRSKAKIIGTLVGLGGALVMTLYK-GPLIPLPWSNPNMDQQNGHTNNSQDH--NNWVVG 189

Query: 188 SALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWKLD 247
           + LIL   +A S + +LQ+   K YPA LS++ LIC   ++Q+  +AL   R+P+ W + 
Sbjct: 190 TLLILLGCVAWSGFYVLQSITIKTYPADLSLSALICLAGAVQSFAVALVVERHPSGWAVG 249

Query: 248 WNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHL 307
           W+ +    +Y G+++S + YY+Q   +  +GPVF   F P+ +++VAL +     E++H 
Sbjct: 250 WDARLFAPLYTGIVSSGITYYVQGMVMKTRGPVFVTAFNPLCMILVALIASFILHEQIHF 309

Query: 308 SSLIGAFFIVAGLYCVLWGKRKD 330
             +IG   I AGLY V+WGK KD
Sbjct: 310 GCVIGGAVIAAGLYMVVWGKGKD 332

Arabidopsis thaliana (taxid: 3702)

>sp|Q94AP3|WAT1_ARATH Protein WALLS ARE THIN 1 OS=Arabidopsis thaliana GN=WAT1 PE=1 SV=1

 Score =  239 bits (609), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 128/345 (37%), Positives = 208/345 (60%), Gaps = 4/345 (1%)

Query: 9   YMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSF 68
           ++A++  QF +AG +++ + AL  G+++LVF VYR++IA+LLL PFAY LE+K+RP  + 
Sbjct: 21  HIAMLTLQFGYAGFHVVSRAALNMGISKLVFPVYRNIIALLLLLPFAYFLEKKERPAITL 80

Query: 69  AVMAKIFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITS 128
             + + F LAL+G T +   Y +G+D  SPT A+++ N VP+ TFL+A LL +EKV+I  
Sbjct: 81  NFLIQFFFLALIGITANQGFYLLGLDNTSPTFASSMQNSVPAITFLMAALLRIEKVRINR 140

Query: 129 GRGRAKVLGTIICVGGSLLFTLWRSGYLFK--SVVEKPLINIYNNNADHLRHHGKENWIK 186
             G +K+LGT +CV G+ + TL++   ++   S +   L+   +     L +   +NW  
Sbjct: 141 RDGISKILGTALCVAGASVITLYKGPTIYTPASHLHAHLLTTNSAVLAPLGNAAPKNWTL 200

Query: 187 GSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWKL 246
           G   ++   ++ S WL+ QA V K YPA LS+ +  CFF  +Q   +A F  R+   W  
Sbjct: 201 GCIYLIGHCLSWSGWLVFQAPVLKSYPARLSVTSYTCFFGIIQFLIIAAFCERDSQAWVF 260

Query: 247 DWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLH 306
               +  T++Y G++ S + + +Q WCI   GPVF A++ PVQ ++VA+ + IA  E  +
Sbjct: 261 HSGWELFTILYAGIVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASIALGEEFY 320

Query: 307 LSSLIGAFFIVAGLYCVLWGKRKDSLAADDEHKDGNMKTTADDKI 351
           L  +IGA  I+AGLY VL+GK ++   A  E     ++++A+  I
Sbjct: 321 LGGIIGAVLIIAGLYFVLYGKSEERKFAALE--KAAIQSSAEHGI 363

Required for secondary wall formation in fibers, especially in short days conditions. Promotes indole metabolism and transport (e.g. tryptophan, neoglucobrassicin and auxin (indole-3-acetic acid)). May prevent salicylic-acid (SA) accumulation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LV20|WTR17_ARATH WAT1-related protein At3g18200 OS=Arabidopsis thaliana GN=At3g18200 PE=2 SV=1

 Score =  238 bits (606), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 126/334 (37%), Positives = 208/334 (62%), Gaps = 12/334 (3%)

Query: 10  MAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFA 69
           +A+I  QF FAG +I+ ++AL  G++++V+ VYR+++A+LL+GPFAY  E+K+RP  + +
Sbjct: 37  VALITLQFCFAGFHIVSRVALNIGVSKVVYPVYRNLLALLLIGPFAYFFEKKERPPLTIS 96

Query: 70  VMAKIFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSG 129
           ++A+ F LAL+G T +   Y +G+ Y +PT A+A+ N VP+ TF++A  L +E + +   
Sbjct: 97  LLAQFFFLALIGITANQGFYLLGLYYATPTFASAMQNSVPAITFIMACALRLEHIDLVRK 156

Query: 130 RGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLINIYNNNADHLRHHGKENWIKGSA 189
            G AKVLGT++ +GG+ + TL+R   +F   +      +  ++  H    G   W     
Sbjct: 157 HGVAKVLGTLVSIGGATVITLYRGFPIFDQGLNMQKEEVVGSDNSHSLTLG---W----- 208

Query: 190 LILTSH-IALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWKL-D 247
           L L  H ++ + W++LQA V K+YPA L++ +  CFF  +Q   +ALF   +   W +  
Sbjct: 209 LYLMGHCLSWAGWMVLQAPVLKQYPAKLTLTSFTCFFGLIQFLVIALFVETDLNNWIIVS 268

Query: 248 WNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHL 307
           W  +  T++Y G++ S LV YLQTWCI   GPVF A+F P+Q ++VA  + +   ++L+ 
Sbjct: 269 WE-ELFTILYAGIIASGLVVYLQTWCIYKSGPVFVAVFQPLQTLLVAAMAFLILGDQLYS 327

Query: 308 SSLIGAFFIVAGLYCVLWGKRKD-SLAADDEHKD 340
             ++GA FI+ GLY VLWGK ++  LA ++  +D
Sbjct: 328 GGIVGAVFIMLGLYLVLWGKNEERKLALEESQQD 361

Arabidopsis thaliana (taxid: 3702)

>sp|F4IJ08|WTR15_ARATH WAT1-related protein At2g40900 OS=Arabidopsis thaliana GN=At2g40900 PE=2 SV=1

 Score =  236 bits (601), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 118/333 (35%), Positives = 194/333 (58%), Gaps = 10/333 (3%)

Query: 8   PYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPS 67
           PY A++  QF +AG N++ K  L+RG++  V V YR+  A   + PFA + ERK R K +
Sbjct: 11  PYFAMVCLQFGYAGMNLVTKTVLDRGMSHYVLVAYRNAFATAAIAPFALLSERKVRSKMT 70

Query: 68  FAVMAKIFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKIT 127
           F +  +IF+LALLG  I  N+YYIG+   SPT ++A+ N+VP+ T +LA L  MEKV++ 
Sbjct: 71  FPIFMRIFLLALLGPVIDQNLYYIGLKLTSPTFSSAVSNIVPAITIILATLFRMEKVEMR 130

Query: 128 SGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLINIYNNNADHLRHHGKENWIKG 187
             R   KV+GT++ V GS+L   ++           P IN + ++          +++K 
Sbjct: 131 KVRCLVKVMGTLVTVVGSILMIFYKG----------PFINFFRSHLTAASSPPTADYLKA 180

Query: 188 SALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWKLD 247
           +  +L + ++ +S+ +LQA   K+Y A LSM+T++CF  +LQ+  LA     NP+   + 
Sbjct: 181 AVFLLLASLSWASFFVLQAATLKKYSAHLSMSTMVCFMGTLQSLALAFVMEHNPSALNIG 240

Query: 248 WNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHL 307
           +++  L   Y G+++S++ YY+Q   +  KGPVF   F P+ +VIV++ S     + ++L
Sbjct: 241 FDMNLLASAYAGIMSSSIAYYVQGLMMQRKGPVFVTAFNPLIVVIVSIMSFFVLGQGIYL 300

Query: 308 SSLIGAFFIVAGLYCVLWGKRKDSLAADDEHKD 340
             +IG   ++ G+Y VLWGK  D    +  H+D
Sbjct: 301 GGVIGVVVLMVGVYAVLWGKHVDDDGEETRHED 333

Arabidopsis thaliana (taxid: 3702)

>sp|F4HZQ7|WTR5_ARATH WAT1-related protein At1g21890 OS=Arabidopsis thaliana GN=At1g21890 PE=2 SV=1

 Score =  235 bits (599), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 123/341 (36%), Positives = 191/341 (56%), Gaps = 4/341 (1%)

Query: 3   MKAYIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQ 62
           M +  PY+A+I  QF +AG  I+  ++L+ G+N  V  VYRH IA  ++ PFA   ERK 
Sbjct: 6   MNSLKPYLAMISMQFGYAGMYIITMVSLKHGMNHYVLAVYRHAIATAVIAPFALFHERKI 65

Query: 63  RPKPSFAVMAKIFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGME 122
           RPK +F +  +I +L  +   +  N+YY+GM Y S T A+A  NV+P+ TF+LA +  +E
Sbjct: 66  RPKMTFRIFLQIALLGFIEPVLDQNLYYVGMTYTSATFASATANVLPAITFVLAIIFRLE 125

Query: 123 KVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYL----FKSVVEKPLINIYNNNADHLRH 178
            V     R  AKV+GT+I V G+LL TL++   +    F             ++      
Sbjct: 126 SVNFKKVRSIAKVVGTVITVSGALLMTLYKGPIVDFIRFGGGGGGGSDGAGGSHGGAGAA 185

Query: 179 HGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFG 238
              ++WI G+ ++L      + + ILQ+   K+YPA LS+ TLIC   +L+ + ++L   
Sbjct: 186 AMDKHWIPGTLMLLGRTFGWAGFFILQSFTLKQYPAELSLTTLICLMGTLEGTAVSLVTV 245

Query: 239 RNPTIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSI 298
           R+ + WK+ ++       Y GV+ S + YY+Q   +  +GPVF A F P+ +VI A   +
Sbjct: 246 RDLSAWKIGFDSNLFAAAYSGVICSGVAYYVQGVVMRERGPVFVATFNPLCVVITAALGV 305

Query: 299 IAFAERLHLSSLIGAFFIVAGLYCVLWGKRKDSLAADDEHK 339
           +  +E +HL S+IG  FI+ GLY V+WGK KD    DD+  
Sbjct: 306 VVLSESIHLGSVIGTLFIIVGLYTVVWGKGKDKRMTDDDED 346

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FGG3|WTR45_ARATH WAT1-related protein At5g64700 OS=Arabidopsis thaliana GN=At5g64700 PE=2 SV=1

 Score =  233 bits (595), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 126/347 (36%), Positives = 198/347 (57%), Gaps = 12/347 (3%)

Query: 1   MNMKAYIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLER 60
           M+M++  PY+ +   Q  +    ++ K     G+N  VFV YR   A + L P A+  ER
Sbjct: 1   MDMESKKPYLMVTIIQVIYTIMFLISKAVFNGGMNTFVFVFYRQAFATIFLAPLAFFFER 60

Query: 61  KQRPKPSFAVMAKIFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLG 120
           K  P  SF    KIF+L+L G T+ +++  I + Y S T+A A    +P+ TF LA L G
Sbjct: 61  KSAPPLSFVTFIKIFMLSLFGVTLSLDLNGIALSYTSATLAAATTASLPAITFFLALLFG 120

Query: 121 MEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYL-------FKSVVEKPLINIYNNNA 173
           ME++K+ S +G AK++G  +C+GG ++  +++   L       F    E P    + NN 
Sbjct: 121 MERLKVKSIQGTAKLVGITVCMGGVIILAIYKGPLLKLPLCPHFYHGQEHP----HRNNP 176

Query: 174 DHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFL 233
            H+   G  +W+KG  L++TS+I    WL+LQ +V K YP+ L   TL C  +S+Q+  +
Sbjct: 177 GHVSG-GSTSWLKGCVLMITSNILWGLWLVLQGRVLKVYPSKLYFTTLHCLLSSIQSFVI 235

Query: 234 ALFFGRNPTIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIV 293
           A+   R+ + WKL WN++ + V+YCG + + + YYLQ+W I  +GPVF +MF P+ L+  
Sbjct: 236 AIALERDISAWKLGWNLRLVAVIYCGFIVTGVAYYLQSWVIEKRGPVFLSMFTPLSLLFT 295

Query: 294 ALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGKRKDSLAADDEHKD 340
            L S I   E + L S++G   ++ GLYCVLWGK ++   + D+  D
Sbjct: 296 LLSSAILLCEIISLGSIVGGLLLIIGLYCVLWGKSREEKNSGDDKID 342

Arabidopsis thaliana (taxid: 3702)

>sp|Q501F8|WTR32_ARATH WAT1-related protein At4g08300 OS=Arabidopsis thaliana GN=At4g08300 PE=2 SV=1

 Score =  230 bits (586), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 119/338 (35%), Positives = 195/338 (57%), Gaps = 6/338 (1%)

Query: 2   NMKAYIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERK 61
            M    P +AII  QF +AG  I+  ++ + G+N  +   YRHV+A +++ PFA +LERK
Sbjct: 5   KMDKLKPIIAIISLQFGYAGMYIITMVSFKHGMNHWILATYRHVVATIVIAPFALILERK 64

Query: 62  QRPKPSFAVMAKIFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGM 121
            RPK ++ +  +I  L  L   +  N+YYIGM   S T ++A  N +P+ TF++A +  +
Sbjct: 65  IRPKMTWPLFLRILALGFLEPLLDQNLYYIGMKATSATYSSAFVNALPAITFIMAVIFRI 124

Query: 122 EKVKITSGRGRAKVLGTIICVGGSLLFTLWRSG--YLFKSVVEKPLINIYNNNADHLRHH 179
           E V +   R  AKV+GT I VGG+++ TL++     LFK+       +++  ++      
Sbjct: 125 ETVNLKKTRSLAKVIGTAITVGGAMVMTLYKGPAIELFKTAHS----SLHGGSSGTSSET 180

Query: 180 GKENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGR 239
             +NW+ G+  ++ S    + + ILQ+   K+YPA LS+   IC   ++  +  +L   R
Sbjct: 181 TDQNWVTGTLAVMGSITTWAGFFILQSFTLKKYPAELSLVMWICAMGTVLNTIASLIMVR 240

Query: 240 NPTIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSII 299
           + + WK+  +   L  +Y GV+ S + YY+Q+  I  +GPVFT  F P+ ++I A   ++
Sbjct: 241 DVSAWKVGMDSGTLAAVYSGVVCSGMAYYIQSIVIRERGPVFTTSFSPMCMIITAFLGVL 300

Query: 300 AFAERLHLSSLIGAFFIVAGLYCVLWGKRKDSLAADDE 337
             AE++HL S+IGA FIV GLY V+WGK KD + + +E
Sbjct: 301 VLAEKIHLGSIIGAIFIVFGLYSVVWGKAKDEVISVEE 338

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	359
255555847	372	Auxin-induced protein 5NG4, putative [Ri	0.972	0.938	0.674	1e-135
297742489	365	unnamed protein product [Vitis vinifera]	0.986	0.969	0.647	1e-134
224117720	366	predicted protein [Populus trichocarpa]	0.974	0.956	0.672	1e-132
359474183	356	PREDICTED: auxin-induced protein 5NG4-li	0.949	0.957	0.656	1e-132
297742487	366	unnamed protein product [Vitis vinifera]	0.986	0.967	0.617	1e-124
359473995	357	PREDICTED: auxin-induced protein 5NG4-li	0.949	0.955	0.628	1e-122
297742488	331	unnamed protein product [Vitis vinifera]	0.838	0.909	0.675	1e-116
359473997	361	PREDICTED: auxin-induced protein 5NG4-li	0.838	0.833	0.675	1e-115
224117712	254	predicted protein [Populus trichocarpa]	0.662	0.937	0.661	7e-84
116789039	392	unknown [Picea sitchensis]	0.910	0.834	0.465	2e-78

>gi|255555847|ref|XP_002518959.1| Auxin-induced protein 5NG4, putative [Ricinus communis] gi|223541946|gb|EEF43492.1| Auxin-induced protein 5NG4, putative [Ricinus communis]

 Score =  487 bits (1254), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 238/353 (67%), Positives = 282/353 (79%), Gaps = 4/353 (1%)

Query: 3   MKAYIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQ 62
           M     Y A+I  Q A+ GSNILMKIALE+GLNQLVFVVYRH+IAM+L+GPFAYVLERKQ
Sbjct: 1   MATCTSYAAMILVQLAYGGSNILMKIALEKGLNQLVFVVYRHLIAMILVGPFAYVLERKQ 60

Query: 63  RPKPSFAVMAKIFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGME 122
           RP  S  V+ KIFVLA LG TIH+NVYY G+ Y S TVA+AL NV+PS TF++A LLGME
Sbjct: 61  RPPLSLPVITKIFVLASLGTTIHLNVYYAGLAYTSATVASALSNVIPSLTFVMAVLLGME 120

Query: 123 KVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLINIYNNNADHLRHHGKE 182
           K+KI+S RG AKV GT+IC+GGSL+FT W+ GYL+KS+ E+PLI+IY++   +   H KE
Sbjct: 121 KLKISSARGWAKVFGTVICIGGSLVFTFWKGGYLYKSLEERPLISIYSSRGHNELRHAKE 180

Query: 183 NWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPT 242
           NWIKGSALILTSHIA S+WLILQA V+K YPA LS+ TLICFFAS+Q+S LALFFGRNPT
Sbjct: 181 NWIKGSALILTSHIAWSAWLILQAVVYKVYPARLSLTTLICFFASIQSSVLALFFGRNPT 240

Query: 243 IWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFA 302
           +WKLDWNVQ LT++YCGV+ SALVYYLQTWCIS KGPVF AMF P+ L+IV +FS IAFA
Sbjct: 241 LWKLDWNVQLLTIIYCGVVISALVYYLQTWCISKKGPVFAAMFSPLLLIIVGIFSAIAFA 300

Query: 303 ERLHLSSLIGAFFIVAGLYCVLWGKRK-DSLAADDEHKDGNMKTTADDKILEI 354
           ERLH+ SL GA  I+ GLYCVLWGKR+ DS A   E   G++    D   +EI
Sbjct: 301 ERLHVGSLTGAVLIILGLYCVLWGKRQEDSTAESPEEGKGSV---GDGNPVEI 350

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297742489|emb|CBI34638.3| unnamed protein product [Vitis vinifera]

 Score =  486 bits (1250), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 231/357 (64%), Positives = 278/357 (77%), Gaps = 3/357 (0%)

Query: 3   MKAYIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQ 62
           MK + PY A++  Q A+ GSNIL+KIA+++GLNQ+VFVVYRH+IAMLLLGPFAYV ER Q
Sbjct: 1   MKNWGPYGAMVLIQLAYGGSNILIKIAIDKGLNQIVFVVYRHIIAMLLLGPFAYVFERTQ 60

Query: 63  RPKPSFAVMAKIFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGME 122
           RP  SF+VM KIFVLA LG T+H+NVYY G+ Y S TVA+ALGNV+P  TFL+A L  ME
Sbjct: 61  RPSLSFSVMMKIFVLASLGTTVHLNVYYAGLHYTSATVASALGNVIPGLTFLMAVLFRME 120

Query: 123 KVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLINIYNNNADHLRHHGKE 182
           +V+I S RGRAKVLGT++C+GG+L FT W+ GYLF    E+PLIN+Y+       HHG +
Sbjct: 121 EVRIRSARGRAKVLGTMVCIGGALTFTFWKGGYLFNGFTERPLINVYSTKGSASEHHGGK 180

Query: 183 NWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPT 242
           NWIKGS LIL SHIA SSWLILQA V+K YPA LS+N LICFFASLQ+SFLAL F RNP 
Sbjct: 181 NWIKGSVLILISHIAWSSWLILQAVVYKVYPARLSLNVLICFFASLQSSFLALIFARNPV 240

Query: 243 IWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFA 302
           +WKL+WNVQ LT++YCGV+ S LVYYLQTWCIS +GPVF AMF P+ ++ V +FS +AFA
Sbjct: 241 LWKLEWNVQLLTIIYCGVVISGLVYYLQTWCISKRGPVFAAMFTPLLVIFVGIFSAVAFA 300

Query: 303 ERLHLSSLIGAFFIVAGLYCVLWGKRKDSLAADDEHKDGNMKTTADDKILEISTSTK 359
           ERLHLSSLIGAF I+AGLY VLWGKR D      E    + K   DDK+LEIS + +
Sbjct: 301 ERLHLSSLIGAFLIIAGLYIVLWGKRTD---GRSEGISKSKKGLDDDKVLEISINDQ 354

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224117720|ref|XP_002317651.1| predicted protein [Populus trichocarpa] gi|222860716|gb|EEE98263.1| predicted protein [Populus trichocarpa]

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 238/354 (67%), Positives = 279/354 (78%), Gaps = 4/354 (1%)

Query: 3   MKAYIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQ 62
           M+A  PY A++  QFA+ GSNILMKIALE+GLNQ+VFVVYRHVIA++LLGPFAYV+ERKQ
Sbjct: 1   MQACAPYAAMLLVQFAYGGSNILMKIALEKGLNQIVFVVYRHVIAVILLGPFAYVIERKQ 60

Query: 63  RPKPSFAVMAKIFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGME 122
           RP  S +V+ KIFVL+ LG TIH+NVYY G+ Y SPTVA+AL NV+PS TF++A LLGME
Sbjct: 61  RPSLSLSVIIKIFVLSSLGTTIHLNVYYAGLAYTSPTVASALSNVIPSLTFIMAVLLGME 120

Query: 123 KVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLINIYNNNADHLRH-HGK 181
           KVK  S RG AK+LGT IC+ GSL+FT W+ GYLFKS   + LINIY+       + H K
Sbjct: 121 KVKTESPRGWAKMLGTAICISGSLVFTFWKGGYLFKSFENRALINIYSTKGSAGEYRHAK 180

Query: 182 ENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNP 241
           ENWIKGSALILTSH+A S+WLILQA V+K YPA LS+NTLICFFAS+Q+SFLALFF R  
Sbjct: 181 ENWIKGSALILTSHVAWSAWLILQAVVYKVYPARLSLNTLICFFASIQSSFLALFFARTT 240

Query: 242 TIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAF 301
            IWKLDWNVQ LT++YCGV+ SAL YYLQTWCIS KGPVF AMF P+ +VIV LFS  AF
Sbjct: 241 AIWKLDWNVQLLTIIYCGVVISALGYYLQTWCISHKGPVFVAMFSPLLVVIVGLFSAFAF 300

Query: 302 AERLHLSSLIGAFFIVAGLYCVLWGKRKDSLAADDEHKDGNMKTTADDKILEIS 355
           AERLHL SLIG   IV GLYCVLWGKR+D+ AA    K    +  A+ K +EIS
Sbjct: 301 AERLHLGSLIGTGLIVVGLYCVLWGKRQDNSAA---QKPDEGRGLANGKTMEIS 351

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359474183|ref|XP_002273800.2| PREDICTED: auxin-induced protein 5NG4-like [Vitis vinifera]

 Score =  477 bits (1228), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 226/344 (65%), Positives = 270/344 (78%), Gaps = 3/344 (0%)

Query: 16  QFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIF 75
           Q A+ GSNIL+KIA+++GLNQ+VFVVYRH+IAMLLLGPFAYV ER QRP  SF+VM KIF
Sbjct: 5   QLAYGGSNILIKIAIDKGLNQIVFVVYRHIIAMLLLGPFAYVFERTQRPSLSFSVMMKIF 64

Query: 76  VLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKV 135
           VLA LG T+H+NVYY G+ Y S TVA+ALGNV+P  TFL+A L  ME+V+I S RGRAKV
Sbjct: 65  VLASLGTTVHLNVYYAGLHYTSATVASALGNVIPGLTFLMAVLFRMEEVRIRSARGRAKV 124

Query: 136 LGTIICVGGSLLFTLWRSGYLFKSVVEKPLINIYNNNADHLRHHGKENWIKGSALILTSH 195
           LGT++C+GG+L FT W+ GYLF    E+PLIN+Y+       HHG +NWIKGS LIL SH
Sbjct: 125 LGTMVCIGGALTFTFWKGGYLFNGFTERPLINVYSTKGSASEHHGGKNWIKGSVLILISH 184

Query: 196 IALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWKLDWNVQFLTV 255
           IA SSWLILQA V+K YPA LS+N LICFFASLQ+SFLAL F RNP +WKL+WNVQ LT+
Sbjct: 185 IAWSSWLILQAVVYKVYPARLSLNVLICFFASLQSSFLALIFARNPVLWKLEWNVQLLTI 244

Query: 256 MYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFF 315
           +YCGV+ S LVYYLQTWCIS +GPVF AMF P+ ++ V +FS +AFAERLHLSSLIGAF 
Sbjct: 245 IYCGVVISGLVYYLQTWCISKRGPVFAAMFTPLLVIFVGIFSAVAFAERLHLSSLIGAFL 304

Query: 316 IVAGLYCVLWGKRKDSLAADDEHKDGNMKTTADDKILEISTSTK 359
           I+AGLY VLWGKR D      E    + K   DDK+LEIS + +
Sbjct: 305 IIAGLYIVLWGKRTD---GRSEGISKSKKGLDDDKVLEISINDQ 345

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297742487|emb|CBI34636.3| unnamed protein product [Vitis vinifera]

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 221/358 (61%), Positives = 271/358 (75%), Gaps = 4/358 (1%)

Query: 3   MKAYIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQ 62
           MK + P+ A++  Q A  GS ILM IA+++GLNQ+VFVVYRH+IAMLLLGPFAYVLER Q
Sbjct: 1   MKTWGPHGAMVLVQLANGGSIILMGIAMDKGLNQIVFVVYRHIIAMLLLGPFAYVLERTQ 60

Query: 63  RPKPSFAVMAKIFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGME 122
           RP  SF+VM KIFVLA LG TI +NVYY G+ Y S TVA+AL N +PS TFL+A L  ME
Sbjct: 61  RPSLSFSVMMKIFVLASLGTTIFLNVYYAGLHYTSATVASALSNGIPSLTFLMAVLFRME 120

Query: 123 KVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLINIYNNNADHLR-HHGK 181
           +V+I S RGRAKVLGT++C+ G+L FT W+ GYLF   +E+PLIN+++        +HG 
Sbjct: 121 EVRIQSARGRAKVLGTMVCICGALTFTFWKEGYLFNGFMERPLINVHSTKGSASELNHGV 180

Query: 182 ENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNP 241
           +NWIKGSALIL S+IA  SWLILQ  V+K YPA LS+N LICFFASLQ+SFLAL F RNP
Sbjct: 181 KNWIKGSALILISNIAWCSWLILQVVVYKVYPARLSLNVLICFFASLQSSFLALIFARNP 240

Query: 242 TIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAF 301
            +WKL+WNVQ  T++Y GV+ S LVYYLQTWCI+ +GPVF AMF P+Q++ V +FS +AF
Sbjct: 241 VLWKLEWNVQLWTIIYSGVVGSGLVYYLQTWCINKRGPVFAAMFTPLQVITVGIFSAVAF 300

Query: 302 AERLHLSSLIGAFFIVAGLYCVLWGKRKDSLAADDEHKDGNMKTTADDKILEISTSTK 359
           AERLHL SLIGAF I+AGLY VLWGKR D      E    + K   DDK+LEIS + +
Sbjct: 301 AERLHLGSLIGAFLIIAGLYIVLWGKRTD---GRSEGTSESEKGLHDDKVLEISVNDE 355

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359473995|ref|XP_002271326.2| PREDICTED: auxin-induced protein 5NG4-like [Vitis vinifera]

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 217/345 (62%), Positives = 263/345 (76%), Gaps = 4/345 (1%)

Query: 16  QFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIF 75
           Q A  GS ILM IA+++GLNQ+VFVVYRH+IAMLLLGPFAYVLER QRP  SF+VM KIF
Sbjct: 5   QLANGGSIILMGIAMDKGLNQIVFVVYRHIIAMLLLGPFAYVLERTQRPSLSFSVMMKIF 64

Query: 76  VLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKV 135
           VLA LG TI +NVYY G+ Y S TVA+AL N +PS TFL+A L  ME+V+I S RGRAKV
Sbjct: 65  VLASLGTTIFLNVYYAGLHYTSATVASALSNGIPSLTFLMAVLFRMEEVRIQSARGRAKV 124

Query: 136 LGTIICVGGSLLFTLWRSGYLFKSVVEKPLINIYNNNADHLR-HHGKENWIKGSALILTS 194
           LGT++C+ G+L FT W+ GYLF   +E+PLIN+++        +HG +NWIKGSALIL S
Sbjct: 125 LGTMVCICGALTFTFWKEGYLFNGFMERPLINVHSTKGSASELNHGVKNWIKGSALILIS 184

Query: 195 HIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWKLDWNVQFLT 254
           +IA  SWLILQ  V+K YPA LS+N LICFFASLQ+SFLAL F RNP +WKL+WNVQ  T
Sbjct: 185 NIAWCSWLILQVVVYKVYPARLSLNVLICFFASLQSSFLALIFARNPVLWKLEWNVQLWT 244

Query: 255 VMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAF 314
           ++Y GV+ S LVYYLQTWCI+ +GPVF AMF P+Q++ V +FS +AFAERLHL SLIGAF
Sbjct: 245 IIYSGVVGSGLVYYLQTWCINKRGPVFAAMFTPLQVITVGIFSAVAFAERLHLGSLIGAF 304

Query: 315 FIVAGLYCVLWGKRKDSLAADDEHKDGNMKTTADDKILEISTSTK 359
            I+AGLY VLWGKR D      E    + K   DDK+LEIS + +
Sbjct: 305 LIIAGLYIVLWGKRTD---GRSEGTSESEKGLHDDKVLEISVNDE 346

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297742488|emb|CBI34637.3| unnamed protein product [Vitis vinifera]

 Score =  423 bits (1088), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 204/302 (67%), Positives = 239/302 (79%), Gaps = 1/302 (0%)

Query: 30  LERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIHINVY 89
           L +GLNQ+VFV YRH+IA LLLGPFAYVLER QRP  SF+VM KIFVLA LG TI +NVY
Sbjct: 21  LNKGLNQIVFVEYRHIIATLLLGPFAYVLERTQRPSLSFSVMMKIFVLASLGTTIFLNVY 80

Query: 90  YIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFT 149
           Y G+ Y S TVA+AL N +PS TFL+A L  ME+V+I S RGRAKVLGT++C+GG+L FT
Sbjct: 81  YAGLHYTSATVASALSNGIPSLTFLMAVLFRMEEVRIQSARGRAKVLGTMVCIGGALTFT 140

Query: 150 LWRSGYLFKSVVEKPLINIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVF 209
            W+ G LF    E+PLIN+Y+       HHG +NWIKGS LIL SHIA SSWLILQA V+
Sbjct: 141 FWKGGCLFNGFTERPLINVYSTKGSASEHHGMKNWIKGSVLILISHIAWSSWLILQAVVY 200

Query: 210 KEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWKLDWNVQFLTVMYCGVLNSALVYYL 269
           K YPA LS+N LICFFASLQ+SFLAL F RNP +WKL+WNVQ LT++YCGV+ S LVYYL
Sbjct: 201 KVYPARLSLNGLICFFASLQSSFLALIFARNPVLWKLEWNVQLLTIIYCGVVGSGLVYYL 260

Query: 270 QTWCISVKGPVFTAMFIPVQLVIVALFS-IIAFAERLHLSSLIGAFFIVAGLYCVLWGKR 328
           QTWCIS +GPVF AMF P+ +  V +FS ++AFAERLHLSSLIGAF I+AGLY VL GKR
Sbjct: 261 QTWCISKRGPVFAAMFTPLLVSFVGIFSAVVAFAERLHLSSLIGAFLIIAGLYIVLSGKR 320

Query: 329 KD 330
            D
Sbjct: 321 ID 322

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359473997|ref|XP_002271287.2| PREDICTED: auxin-induced protein 5NG4-like [Vitis vinifera]

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 204/302 (67%), Positives = 239/302 (79%), Gaps = 1/302 (0%)

Query: 30  LERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIHINVY 89
           L +GLNQ+VFV YRH+IA LLLGPFAYVLER QRP  SF+VM KIFVLA LG TI +NVY
Sbjct: 51  LNKGLNQIVFVEYRHIIATLLLGPFAYVLERTQRPSLSFSVMMKIFVLASLGTTIFLNVY 110

Query: 90  YIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFT 149
           Y G+ Y S TVA+AL N +PS TFL+A L  ME+V+I S RGRAKVLGT++C+GG+L FT
Sbjct: 111 YAGLHYTSATVASALSNGIPSLTFLMAVLFRMEEVRIQSARGRAKVLGTMVCIGGALTFT 170

Query: 150 LWRSGYLFKSVVEKPLINIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVF 209
            W+ G LF    E+PLIN+Y+       HHG +NWIKGS LIL SHIA SSWLILQA V+
Sbjct: 171 FWKGGCLFNGFTERPLINVYSTKGSASEHHGMKNWIKGSVLILISHIAWSSWLILQAVVY 230

Query: 210 KEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWKLDWNVQFLTVMYCGVLNSALVYYL 269
           K YPA LS+N LICFFASLQ+SFLAL F RNP +WKL+WNVQ LT++YCGV+ S LVYYL
Sbjct: 231 KVYPARLSLNGLICFFASLQSSFLALIFARNPVLWKLEWNVQLLTIIYCGVVGSGLVYYL 290

Query: 270 QTWCISVKGPVFTAMFIPVQLVIVALFS-IIAFAERLHLSSLIGAFFIVAGLYCVLWGKR 328
           QTWCIS +GPVF AMF P+ +  V +FS ++AFAERLHLSSLIGAF I+AGLY VL GKR
Sbjct: 291 QTWCISKRGPVFAAMFTPLLVSFVGIFSAVVAFAERLHLSSLIGAFLIIAGLYIVLSGKR 350

Query: 329 KD 330
            D
Sbjct: 351 ID 352

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224117712|ref|XP_002317649.1| predicted protein [Populus trichocarpa] gi|222860714|gb|EEE98261.1| predicted protein [Populus trichocarpa]

 Score =  317 bits (811), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 160/242 (66%), Positives = 184/242 (76%), Gaps = 4/242 (1%)

Query: 115 LAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLINIYNNNAD 174
           +A LLGMEKVK  S RG AK+LGT IC+ GSL+FT W+ GYLFKS   + LINIY+    
Sbjct: 1   MAVLLGMEKVKTESPRGWAKMLGTTICISGSLVFTFWKGGYLFKSFENRALINIYSTKGS 60

Query: 175 HLRH-HGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFL 233
              + H KENWIKGSALILTSH+A S+WLILQA V+K YPA LS+NTLICFFAS+Q+SFL
Sbjct: 61  AGEYMHAKENWIKGSALILTSHVAWSAWLILQAVVYKVYPARLSLNTLICFFASIQSSFL 120

Query: 234 ALFFGRNPTIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIV 293
           ALFF R   IWKLDWNVQ LT++YCGV+ SAL YYLQTWCIS KGPVF AMF P+ +VIV
Sbjct: 121 ALFFARTTAIWKLDWNVQLLTIIYCGVVISALGYYLQTWCISHKGPVFVAMFSPLLVVIV 180

Query: 294 ALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGKRKDSLAADDEHKDGNMKTTADDKILE 353
            LFS  AFAERLHL SLIG   IV GLYCVLWGKR+D+ AA    K    +  A+ K +E
Sbjct: 181 GLFSAFAFAERLHLGSLIGTGLIVVGLYCVLWGKRQDNSAA---QKPDEGRGLANGKTME 237

Query: 354 IS 355
           IS
Sbjct: 238 IS 239

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116789039|gb|ABK25095.1| unknown [Picea sitchensis]

 Score =  299 bits (765), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 154/331 (46%), Positives = 216/331 (65%), Gaps = 4/331 (1%)

Query: 8   PYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPS 67
           PY+A+I  QF +AG NI+ K++L RG+N  V VVYRH  A ++L PFA+ +ERK RPK +
Sbjct: 10  PYVAMISLQFGYAGMNIITKVSLNRGMNHFVLVVYRHAAATVVLAPFAFFIERKVRPKLT 69

Query: 68  FAVMAKIFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKIT 127
           F++  +IFVL LLG  I  N YY+G+   SPT A AL NV+P+ TF++A L  ME V I 
Sbjct: 70  FSIFCQIFVLGLLGPVIDQNFYYLGLKLTSPTYACALSNVLPAMTFVIALLFRMENVNIK 129

Query: 128 SGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLINIYNNNADHLRHHGKENWIKG 187
             R +AK++GTI+CVGG++L TL++ G + K V      +   + A  + +   +NWI G
Sbjct: 130 KLRSQAKIVGTIVCVGGAMLMTLYK-GPIVKMVWSAHHQSPQTSAAAAIDN---KNWIIG 185

Query: 188 SALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWKLD 247
           S LI+ + +A S   ILQA V K+Y A LS+ TLICF  +LQ + L+L   R+P+ W L 
Sbjct: 186 SVLIIAATLAWSGLFILQAAVLKKYSAQLSLATLICFLGTLQATVLSLAVVRDPSQWALG 245

Query: 248 WNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHL 307
           W++  LT +Y GV+ SA+ YY+Q  C+ VKGPVF   F P+ ++IVA+ + I  AE + L
Sbjct: 246 WDLNLLTAVYSGVVASAIAYYVQGLCMRVKGPVFATAFSPLMMIIVAIMASIILAENIFL 305

Query: 308 SSLIGAFFIVAGLYCVLWGKRKDSLAADDEH 338
            S++G   IV GLY VLWGK KDS    D++
Sbjct: 306 GSVLGGVLIVIGLYAVLWGKVKDSKILTDKN 336

Source: Picea sitchensis

Species: Picea sitchensis

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	359
TAIR|locus:2169414	402	UMAMIT9 "Usually multiple acid	0.949	0.848	0.378	1.6e-63
TAIR|locus:2176065	359	UMAMIT21 "AT5G64700" [Arabidop	0.933	0.933	0.368	4.2e-63
TAIR|locus:2092702	383	UMAMIT4 "AT3G18200" [Arabidops	0.896	0.840	0.380	2.3e-62
TAIR|locus:2039792	374	UMAMIT14 "AT2G39510" [Arabidop	0.986	0.946	0.361	3.8e-62
TAIR|locus:2132447	384	UMAMIT20 "Usually multiple aci	0.891	0.833	0.377	3.4e-61
TAIR|locus:2005689	389	WAT1 "Walls Are Thin 1" [Arabi	0.896	0.827	0.382	5.5e-61
TAIR|locus:2049847	380	UMAMIT12 "Usually multiple aci	0.949	0.897	0.363	2.4e-60
TAIR|locus:2031144	343	UMAMIT22 "Usually multiple aci	0.866	0.906	0.383	3.1e-60
TAIR|locus:2058460	394	UMAMIT11 "Usually multiple aci	0.899	0.819	0.354	3.2e-58
TAIR|locus:2201148	389	UMAMIT19 "Usually multiple aci	0.927	0.856	0.369	1.4e-57

TAIR|locus:2169414 UMAMIT9 "Usually multiple acids move in and out Transporters 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 648 (233.2 bits), Expect = 1.6e-63, P = 1.6e-63
 Identities = 131/346 (37%), Positives = 203/346 (58%)

Query:     8 PYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPS 67
             PY A+I  QF +AG NI+ KI+L  G++  V VVYRH IA  ++ PFA+  ERK +PK +
Sbjct:    18 PYFAMISLQFGYAGMNIITKISLNTGMSHYVLVVYRHAIATAVIAPFAFFFERKAQPKIT 77

Query:    68 FAVMAKIFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKIT 127
             F++  ++F+L LLG  I  N YY+G+ Y SPT + A+ N++P+ TF+LA L  ME + + 
Sbjct:    78 FSIFMQLFILGLLGPVIDQNFYYMGLKYTSPTFSCAMSNMLPAMTFILAVLFRMEMLDLK 137

Query:   128 SGRGRAKVLGTIICVGGSLLFTLWRSGY--LFKSVVEKPLINIYNNNADHLRHHGKENWI 185
                 +AK+ GT++ V G++L T+++     LF +       + + N          + ++
Sbjct:   138 KLWCQAKIAGTVVTVAGAMLMTIYKGPIVELFWTKYMHIQDSSHANTTSSKNSSSDKEFL 197

Query:   186 KGSALILTSHIALSSWLILQAKVFKEYPA-PLSMNTLICFFASLQTSFLALFFGRNPTIW 244
             KGS L++ + +A +S  +LQAK+ K Y    LS+ TLICF  +LQ   +      NP+ W
Sbjct:   198 KGSILLIFATLAWASLFVLQAKILKTYAKHQLSLTTLICFIGTLQAVAVTFVMEHNPSAW 257

Query:   245 KLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAER 304
             ++ W++  L   Y G++ S++ YY+Q   +  +GPVF   F P+ +VIVA+      AE+
Sbjct:   258 RIGWDMNLLAAAYSGIVASSISYYVQGIVMKKRGPVFATAFSPLMMVIVAVMGSFVLAEK 317

Query:   305 LHLSSLIGAFFIVAGLYCVLWGKRKDSLAADDEHK--DGNMKTTAD 348
             + L  +IGA  IV GLY VLWGK+K++     E    D N K T D
Sbjct:   318 IFLGGVIGAVLIVIGLYAVLWGKQKENQVTICELAKIDSNSKVTED 363

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2176065 UMAMIT21 "AT5G64700" [Arabidopsis thaliana (taxid:3702)]

 Score = 644 (231.8 bits), Expect = 4.2e-63, P = 4.2e-63
 Identities = 126/342 (36%), Positives = 200/342 (58%)

Query:     1 MNMKAYIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLER 60
             M+M++  PY+ +   Q  +    ++ K     G+N  VFV YR   A + L P A+  ER
Sbjct:     1 MDMESKKPYLMVTIIQVIYTIMFLISKAVFNGGMNTFVFVFYRQAFATIFLAPLAFFFER 60

Query:    61 KQRPKPSFAVMAKIFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLG 120
             K  P  SF    KIF+L+L G T+ +++  I + Y S T+A A    +P+ TF LA L G
Sbjct:    61 KSAPPLSFVTFIKIFMLSLFGVTLSLDLNGIALSYTSATLAAATTASLPAITFFLALLFG 120

Query:   121 MEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLIN----IYNNNADHL 176
             ME++K+ S +G AK++G  +C+GG ++  +++ G L K  +     +     + NN  H+
Sbjct:   121 MERLKVKSIQGTAKLVGITVCMGGVIILAIYK-GPLLKLPLCPHFYHGQEHPHRNNPGHV 179

Query:   177 RHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALF 236
                G  +W+KG  L++TS+I    WL+LQ +V K YP+ L   TL C  +S+Q+  +A+ 
Sbjct:   180 SG-GSTSWLKGCVLMITSNILWGLWLVLQGRVLKVYPSKLYFTTLHCLLSSIQSFVIAIA 238

Query:   237 FGRNPTIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALF 296
               R+ + WKL WN++ + V+YCG + + + YYLQ+W I  +GPVF +MF P+ L+   L 
Sbjct:   239 LERDISAWKLGWNLRLVAVIYCGFIVTGVAYYLQSWVIEKRGPVFLSMFTPLSLLFTLLS 298

Query:   297 SIIAFAERLHLSSLIGAFFIVAGLYCVLWGK-RKDSLAADDE 337
             S I   E + L S++G   ++ GLYCVLWGK R++  + DD+
Sbjct:   299 SAILLCEIISLGSIVGGLLLIIGLYCVLWGKSREEKNSGDDK 340

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2092702 UMAMIT4 "AT3G18200" [Arabidopsis thaliana (taxid:3702)]

 Score = 637 (229.3 bits), Expect = 2.3e-62, P = 2.3e-62
 Identities = 127/334 (38%), Positives = 208/334 (62%)

Query:    10 MAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFA 69
             +A+I  QF FAG +I+ ++AL  G++++V+ VYR+++A+LL+GPFAY  E+K+RP  + +
Sbjct:    37 VALITLQFCFAGFHIVSRVALNIGVSKVVYPVYRNLLALLLIGPFAYFFEKKERPPLTIS 96

Query:    70 VMAKIFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSG 129
             ++A+ F LAL+G T +   Y +G+ Y +PT A+A+ N VP+ TF++A  L +E + +   
Sbjct:    97 LLAQFFFLALIGITANQGFYLLGLYYATPTFASAMQNSVPAITFIMACALRLEHIDLVRK 156

Query:   130 RGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLINIYNNNADHLRHHGKENWIKGSA 189
              G AKVLGT++ +GG+ + TL+R   +F   +      +  ++  H    G   W     
Sbjct:   157 HGVAKVLGTLVSIGGATVITLYRGFPIFDQGLNMQKEEVVGSDNSHSLTLG---W----- 208

Query:   190 LILTSH-IALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWKL-D 247
             L L  H ++ + W++LQA V K+YPA L++ +  CFF  +Q   +ALF   +   W +  
Sbjct:   209 LYLMGHCLSWAGWMVLQAPVLKQYPAKLTLTSFTCFFGLIQFLVIALFVETDLNNWIIVS 268

Query:   248 WNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHL 307
             W   F T++Y G++ S LV YLQTWCI   GPVF A+F P+Q ++VA  + +   ++L+ 
Sbjct:   269 WEELF-TILYAGIIASGLVVYLQTWCIYKSGPVFVAVFQPLQTLLVAAMAFLILGDQLYS 327

Query:   308 SSLIGAFFIVAGLYCVLWGKRKD-SLAADDEHKD 340
               ++GA FI+ GLY VLWGK ++  LA ++  +D
Sbjct:   328 GGIVGAVFIMLGLYLVLWGKNEERKLALEESQQD 361

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2039792 UMAMIT14 "AT2G39510" [Arabidopsis thaliana (taxid:3702)]

 Score = 635 (228.6 bits), Expect = 3.8e-62, P = 3.8e-62
 Identities = 130/360 (36%), Positives = 208/360 (57%)

Query:     1 MNMKAYIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLER 60
             M +K + P++ ++  QF +AG +I+ K AL +G++  V   YRH++A + + PFAY L+R
Sbjct:     1 MALKTWKPFITVVSLQFGYAGLSIIAKFALNQGMSPHVLASYRHIVATIFIAPFAYFLDR 60

Query:    61 KQRPKPSFAVMAKIFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLG 120
             K RPK + ++  KI +L LL  TI  N+YY GM Y S T   A+ NV+P+F F++A++  
Sbjct:    61 KIRPKMTLSIFFKILLLGLLEPTIDQNLYYTGMKYTSATFTAAMTNVLPAFAFIMAWIFR 120

Query:   121 MEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLINIYNNNADHLRHHG 180
             +EKV +     +AK+LGTI+ VGG++L T+ +       ++  P  N ++ + D      
Sbjct:   121 LEKVNVKKIHSQAKILGTIVTVGGAMLMTVVKG-----PLIPLPWANPHDIHQDSSNTGV 175

Query:   181 KENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGR- 239
             K++  KG++LI    I  + ++ LQA   K YP  LS+   ICF  S++++ +ALF  R 
Sbjct:   176 KQDLTKGASLIAIGCICWAGFINLQAITLKSYPVELSLTAYICFLGSIESTIVALFIERG 235

Query:   240 NPTIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSII 299
             NP+ W +  + + L  +Y GV+ S + YY+Q   +  +GPVF   F P+ +VIVA+   I
Sbjct:   236 NPSAWAIHLDSKLLAAVYGGVICSGIGYYVQGVIMKTRGPVFVTAFNPLSMVIVAILGSI 295

Query:   300 AFAERLHLSSLIGAFFIVAGLYCVLWGKRKDSLAADDEHKDGNMKTTADDKILEISTSTK 359
               AE + L  ++GA  IV GLY VLWGK KD  ++     D  +  +    +L    + K
Sbjct:   296 ILAEVMFLGRILGAIVIVLGLYSVLWGKSKDEPSSSFSDMDKELPLSTPQIVLPSKANAK 355

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2132447 UMAMIT20 "Usually multiple acids move in and out Transporters 20" [Arabidopsis thaliana (taxid:3702)]

 Score = 626 (225.4 bits), Expect = 3.4e-61, P = 3.4e-61
 Identities = 122/323 (37%), Positives = 199/323 (61%)

Query:     8 PYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPS 67
             PY+ +IF QF  AG+ I++   L +G N+ V +VYR+++A L+L PFA + ERK RPK +
Sbjct:    13 PYLLMIFLQFGAAGTYIVIMATLNQGQNRYVVIVYRNLVAALVLAPFALIFERKVRPKMT 72

Query:    68 FAVMAKIFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKIT 127
              +V+ KI  L  L   +     Y+GM+  S T  +A+ N++PS TF++A++L MEKV I 
Sbjct:    73 LSVLWKIMALGFLEPVLDQGFGYLGMNMTSATYTSAIMNILPSVTFIIAWILRMEKVNIA 132

Query:   128 SGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLINIYNNNADHLRHHGKENWIKG 187
               R +AK++GT++ +GG+L+ TL++ G L       P ++  N + ++ + H   NW+ G
Sbjct:   133 EVRSKAKIIGTLVGLGGALVMTLYK-GPLIPLPWSNPNMDQQNGHTNNSQDHN--NWVVG 189

Query:   188 SALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWKLD 247
             + LIL   +A S + +LQ+   K YPA LS++ LIC   ++Q+  +AL   R+P+ W + 
Sbjct:   190 TLLILLGCVAWSGFYVLQSITIKTYPADLSLSALICLAGAVQSFAVALVVERHPSGWAVG 249

Query:   248 WNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHL 307
             W+ +    +Y G+++S + YY+Q   +  +GPVF   F P+ +++VAL +     E++H 
Sbjct:   250 WDARLFAPLYTGIVSSGITYYVQGMVMKTRGPVFVTAFNPLCMILVALIASFILHEQIHF 309

Query:   308 SSLIGAFFIVAGLYCVLWGKRKD 330
               +IG   I AGLY V+WGK KD
Sbjct:   310 GCVIGGAVIAAGLYMVVWGKGKD 332

GO:0005576 "extracellular region" evidence=ISM

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2005689 WAT1 "Walls Are Thin 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
 Identities = 124/324 (38%), Positives = 198/324 (61%)

Query:     9 YMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSF 68
             ++A++  QF +AG +++ + AL  G+++LVF VYR++IA+LLL PFAY LE+K+RP  + 
Sbjct:    21 HIAMLTLQFGYAGFHVVSRAALNMGISKLVFPVYRNIIALLLLLPFAYFLEKKERPAITL 80

Query:    69 AVMAKIFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITS 128
               + + F LAL+G T +   Y +G+D  SPT A+++ N VP+ TFL+A LL +EKV+I  
Sbjct:    81 NFLIQFFFLALIGITANQGFYLLGLDNTSPTFASSMQNSVPAITFLMAALLRIEKVRINR 140

Query:   129 GRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLINIYNNNA--DHLRHHGKENWIK 186
               G +K+LGT +CV G+ + TL++   ++          +  N+A    L +   +NW  
Sbjct:   141 RDGISKILGTALCVAGASVITLYKGPTIYTPASHLHAHLLTTNSAVLAPLGNAAPKNWTL 200

Query:   187 GSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWKL 246
             G   ++   ++ S WL+ QA V K YPA LS+ +  CFF  +Q   +A F  R+   W  
Sbjct:   201 GCIYLIGHCLSWSGWLVFQAPVLKSYPARLSVTSYTCFFGIIQFLIIAAFCERDSQAWVF 260

Query:   247 DWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLH 306
                 +  T++Y G++ S + + +Q WCI   GPVF A++ PVQ ++VA+ + IA  E  +
Sbjct:   261 HSGWELFTILYAGIVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASIALGEEFY 320

Query:   307 LSSLIGAFFIVAGLYCVLWGKRKD 330
             L  +IGA  I+AGLY VL+GK ++
Sbjct:   321 LGGIIGAVLIIAGLYFVLYGKSEE 344

GO:0016020 "membrane" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0009705 "plant-type vacuole membrane" evidence=IDA

GO:0009826 "unidimensional cell growth" evidence=IMP

GO:0009834 "secondary cell wall biogenesis" evidence=IMP

GO:0090355 "positive regulation of auxin metabolic process" evidence=IMP

GO:0090358 "positive regulation of tryptophan metabolic process" evidence=IMP

GO:0000271 "polysaccharide biosynthetic process" evidence=RCA

GO:0006833 "water transport" evidence=RCA

GO:0007389 "pattern specification process" evidence=RCA

GO:0008361 "regulation of cell size" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=RCA

GO:0009926 "auxin polar transport" evidence=RCA

GO:0009932 "cell tip growth" evidence=RCA

GO:0010015 "root morphogenesis" evidence=RCA

GO:0010075 "regulation of meristem growth" evidence=RCA

GO:0010817 "regulation of hormone levels" evidence=RCA

GO:0040007 "growth" evidence=RCA

GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

TAIR|locus:2049847 UMAMIT12 "Usually multiple acids move in and out Transporters 12" [Arabidopsis thaliana (taxid:3702)]

 Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
 Identities = 131/360 (36%), Positives = 210/360 (58%)

Query:     8 PYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPS 67
             P+++++  Q   AG +IL K  L +G++  V VVYRH +A +++ PFA+  ++K RPK +
Sbjct:    15 PFISMVVLQVGLAGMDILSKAVLNKGMSNYVLVVYRHAVATIVMAPFAFYFDKKVRPKMT 74

Query:    68 FAVMAKIFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKIT 127
               +  KI +L LL   I  N+YY+GM Y + T ATA+ NV+P+ TF+LA++ G+E+VK+ 
Sbjct:    75 LMIFFKISLLGLLEPVIDQNLYYLGMKYTTATFATAMYNVLPAITFVLAYIFGLERVKLR 134

Query:   128 SGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLINIYNNNADHLRHHGKENWIKG 187
               R   KV+GT+  VGG+++ TL +   L   +     ++ +N     +  H     IKG
Sbjct:   135 CIRSTGKVVGTLATVGGAMIMTLVKGPVL--DLFWTKGVSAHNTAGTDI--HSA---IKG 187

Query:   188 SALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGR-NPTIWKL 246
             + L+     + + ++ILQA   + YPA LS+   IC   +++ + +AL   + NP+ W +
Sbjct:   188 AVLVTIGCFSYACFMILQAITLRTYPAELSLTAWICLMGTIEGTAVALVMEKGNPSAWAI 247

Query:   247 DWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLH 306
              W+ + LT  Y G++ SAL YY+    +  +GPVF   F P+ ++IVA+ S I FAE+++
Sbjct:   248 GWDTKLLTATYSGIVCSALAYYVGGVVMKTRGPVFVTAFSPLCMIIVAIMSTIIFAEQMY 307

Query:   307 LSSLIGAFFIVAGLYCVLWGKRKD-----SLAADDEHKD------GNMKTTADDKILEIS 355
             L  ++GA  I AGLY V+WGK KD     +L  DDE         GN K   D +++ IS
Sbjct:   308 LGRVLGAVVICAGLYLVIWGKGKDYKYNSTLQLDDESAQPKLELSGNGKDNVDHEVITIS 367

GO:0005737 "cytoplasm" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

TAIR|locus:2031144 UMAMIT22 "Usually multiple acids move in and out Transporters 22" [Arabidopsis thaliana (taxid:3702)]

 Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
 Identities = 124/323 (38%), Positives = 194/323 (60%)

Query:    10 MAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFA 69
             MA++F Q  +AG  +L K+A+ +G N  VFV YR   A L L PFA+ LE  +    SF 
Sbjct:     9 MAMVFVQIVYAGMPLLSKVAISQGTNPFVFVFYRQAFAALALSPFAFFLESSKSSPLSFI 68

Query:    70 VMAKIFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSG 129
             ++ KIF ++L G T+ +N+YY+ ++  + T A A  N +PS TF+LA L  +E V +   
Sbjct:    69 LLLKIFFISLCGLTLSLNLYYVAIENTTATFAAATTNAIPSITFVLALLFRLETVTLKKS 128

Query:   130 RGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKP-LINIYNNNA-DHLRHHGKENWIKG 187
              G AKV G+++ + G+L+F            V+ P LIN YN++   +      +N +KG
Sbjct:   129 HGVAKVTGSMVGMLGALVFAF----------VKGPSLINHYNSSTIPNGTVPSTKNSVKG 178

Query:   188 SALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWKLD 247
             S  +L ++     W+I+Q+KV KEYPA L +  L C F+ +Q++  A+   RNP++WK++
Sbjct:   179 SITMLAANTCWCLWIIMQSKVMKEYPAKLRLVALQCLFSCIQSAVWAVAVNRNPSVWKIE 238

Query:   248 WNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHL 307
             + +  L++ YCG++ + L Y+LQ W I  KGPVFTA++ P+ L++  + S   F E  +L
Sbjct:   239 FGLPLLSMAYCGIMVTGLTYWLQVWAIEKKGPVFTALYTPLALILTCIVSSFLFKETFYL 298

Query:   308 SSLIGAFFIVAGLYCVLWGKRKD 330
              S+ GA  +V GLY  LWGK K+
Sbjct:   299 GSVGGAVLLVCGLYLGLWGKTKE 321

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2058460 UMAMIT11 "Usually multiple acids move in and out Transporters 11" [Arabidopsis thaliana (taxid:3702)]

 Score = 598 (215.6 bits), Expect = 3.2e-58, P = 3.2e-58
 Identities = 118/333 (35%), Positives = 194/333 (58%)

Query:     8 PYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPS 67
             PY A++  QF +AG N++ K  L+RG++  V V YR+  A   + PFA + ERK R K +
Sbjct:    11 PYFAMVCLQFGYAGMNLVTKTVLDRGMSHYVLVAYRNAFATAAIAPFALLSERKVRSKMT 70

Query:    68 FAVMAKIFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKIT 127
             F +  +IF+LALLG  I  N+YYIG+   SPT ++A+ N+VP+ T +LA L  MEKV++ 
Sbjct:    71 FPIFMRIFLLALLGPVIDQNLYYIGLKLTSPTFSSAVSNIVPAITIILATLFRMEKVEMR 130

Query:   128 SGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLINIYNNNADHLRHHGKENWIKG 187
               R   KV+GT++ V GS+L   ++           P IN + ++          +++K 
Sbjct:   131 KVRCLVKVMGTLVTVVGSILMIFYKG----------PFINFFRSHLTAASSPPTADYLKA 180

Query:   188 SALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWKLD 247
             +  +L + ++ +S+ +LQA   K+Y A LSM+T++CF  +LQ+  LA     NP+   + 
Sbjct:   181 AVFLLLASLSWASFFVLQAATLKKYSAHLSMSTMVCFMGTLQSLALAFVMEHNPSALNIG 240

Query:   248 WNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHL 307
             +++  L   Y G+++S++ YY+Q   +  KGPVF   F P+ +VIV++ S     + ++L
Sbjct:   241 FDMNLLASAYAGIMSSSIAYYVQGLMMQRKGPVFVTAFNPLIVVIVSIMSFFVLGQGIYL 300

Query:   308 SSLIGAFFIVAGLYCVLWGKRKDSLAADDEHKD 340
               +IG   ++ G+Y VLWGK  D    +  H+D
Sbjct:   301 GGVIGVVVLMVGVYAVLWGKHVDDDGEETRHED 333

GO:0005576 "extracellular region" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2201148 UMAMIT19 "Usually multiple acids move in and out Transporters 19" [Arabidopsis thaliana (taxid:3702)]

 Score = 592 (213.5 bits), Expect = 1.4e-57, P = 1.4e-57
 Identities = 126/341 (36%), Positives = 195/341 (57%)

Query:     3 MKAYIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQ 62
             M +  PY+A+I  QF +AG  I+  ++L+ G+N  V  VYRH IA  ++ PFA   ERK 
Sbjct:     6 MNSLKPYLAMISMQFGYAGMYIITMVSLKHGMNHYVLAVYRHAIATAVIAPFALFHERKI 65

Query:    63 RPKPSFAVMAKIFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGME 122
             RPK +F +  +I +L  +   +  N+YY+GM Y S T A+A  NV+P+ TF+LA +  +E
Sbjct:    66 RPKMTFRIFLQIALLGFIEPVLDQNLYYVGMTYTSATFASATANVLPAITFVLAIIFRLE 125

Query:   123 KVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLINIYNNNADHLRHHGK- 181
              V     R  AKV+GT+I V G+LL TL++ G +   +         ++ A    H G  
Sbjct:   126 SVNFKKVRSIAKVVGTVITVSGALLMTLYK-GPIVDFIRFGGGGGGGSDGAGG-SHGGAG 183

Query:   182 -----ENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALF 236
                  ++WI G+ ++L      + + ILQ+   K+YPA LS+ TLIC   +L+ + ++L 
Sbjct:   184 AAAMDKHWIPGTLMLLGRTFGWAGFFILQSFTLKQYPAELSLTTLICLMGTLEGTAVSLV 243

Query:   237 FGRNPTIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALF 296
               R+ + WK+ ++       Y GV+ S + YY+Q   +  +GPVF A F P+ +VI A  
Sbjct:   244 TVRDLSAWKIGFDSNLFAAAYSGVICSGVAYYVQGVVMRERGPVFVATFNPLCVVITAAL 303

Query:   297 SIIAFAERLHLSSLIGAFFIVAGLYCVLWGKRKDSLAADDE 337
              ++  +E +HL S+IG  FI+ GLY V+WGK KD    DD+
Sbjct:   304 GVVVLSESIHLGSVIGTLFIIVGLYTVVWGKGKDKRMTDDD 344

GO:0016020 "membrane" evidence=IEA;ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9FL41	WTR38_ARATH	No assigned EC number	0.3651	0.9220	0.8233	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00111249 hypothetical protein (366 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	359
PLN00411	358	PLN00411, PLN00411, nodulin MtN21 family protein;	4e-48
COG0697	292	COG0697, RhaT, Permeases of the drug/metabolite tr	2e-10
pfam00892	126	pfam00892, EamA, EamA-like transporter family	3e-08
pfam00892	126	pfam00892, EamA, EamA-like transporter family	1e-06
TIGR00950	260	TIGR00950, 2A78, Carboxylate/Amino Acid/Amine Tran	0.002

>gnl|CDD|177805 PLN00411, PLN00411, nodulin MtN21 family protein; Provisional

 Score =  165 bits (420), Expect = 4e-48
 Identities = 100/320 (31%), Positives = 177/320 (55%), Gaps = 9/320 (2%)

Query: 11  AIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQR-PKPSFA 69
           A++  + +  G + L K+A  +GLN   F+ Y +++A LLL P  +   R +  P  S +
Sbjct: 17  AMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVS 76

Query: 70  VMAKIFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSG 129
           +++KI +L  LG ++++   YIG++Y +PT+A+A+ N+ P+ TF+LA +  MEKV     
Sbjct: 77  ILSKIGLLGFLG-SMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKER 135

Query: 130 RGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLINIYNNNADHLRHHGKENWIKGSA 189
              AKV+GTI+ + G+L+   +    +F +    P +N    +          +W+ G A
Sbjct: 136 SSVAKVMGTILSLIGALVVIFYHGPRVFVA-SSPPYLNFRQLSPP--LSSSNSDWLIGGA 192

Query: 190 LILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGR-NPTIWKLDW 248
           L+    I +S   ILQA +  EYPA  +++ L     S+ TS + L   + NP++W + +
Sbjct: 193 LLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHF 252

Query: 249 NVQFLTVMYCGVLNSALVYY-LQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHL 307
           ++  +T++   ++ S  VYY + +W +  KGP++ A+F P+ ++I  +   I   + L+L
Sbjct: 253 DITLITIVTMAIITS--VYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYL 310

Query: 308 SSLIGAFFIVAGLYCVLWGK 327
             LIG   I  G Y V+WGK
Sbjct: 311 GCLIGGILITLGFYAVMWGK 330

Length = 358

>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

 Score = 60.7 bits (147), Expect = 2e-10
 Identities = 71/329 (21%), Positives = 133/329 (40%), Gaps = 38/329 (11%)

Query: 1   MNMKAYIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLER 60
           M     +  +A++     +  S I +K+A+E     L     R +IA LLL P   +   
Sbjct: 1   MKRALLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLL--E 58

Query: 61  KQRPKPSFAVMAKIFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLG 120
            +  +P+      + +LALLG  +   + ++ + Y S +VA+ +  ++P FT LLA LL 
Sbjct: 59  PRGLRPALRPWLLLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLL 118

Query: 121 MEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLINIYNNNADHLRHHG 180
           + +          ++LG ++ + G LL  L                             G
Sbjct: 119 LGER-----LSLLQILGILLALAGVLLILLGG-------------------------GGG 148

Query: 181 KENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRN 240
               + G  L L + +  + +  L  ++ +    P+++  L+    +L    L    G  
Sbjct: 149 GILSLLGLLLALAAALLWALYTALVKRLSRL--GPVTLALLLQLLLALLLLLLFFLSGFG 206

Query: 241 PTIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIA 300
             I    W    L ++Y GV ++ L Y L  + + + G    A+   ++ V  AL  ++ 
Sbjct: 207 APILSRAW----LLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLL 262

Query: 301 FAERLHLSSLIGAFFIVAGLYCVLWGKRK 329
             E L  + L+GA  +V G+       R+
Sbjct: 263 LGEPLSPAQLLGAALVVLGVLLASLRARR 291

Length = 292

>gnl|CDD|216178 pfam00892, EamA, EamA-like transporter family

 Score = 51.5 bits (124), Expect = 3e-08
 Identities = 23/127 (18%), Positives = 49/127 (38%), Gaps = 4/127 (3%)

Query: 199 SSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWKLDWNVQFLTVMYC 258
           + + +   K+ +    PL+        A +    L     +   +  L      L ++Y 
Sbjct: 4   ALYFVFSKKLLERIS-PLTFTAYRFLIAGILLILLLFLLRKPFALLSL---KAILALLYL 59

Query: 259 GVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVA 318
           G+  +AL Y L  + +        ++   +  V   + S++   E+L L  L+G   I+ 
Sbjct: 60  GLFGTALGYLLYFYALKYVSASNASVITSLSPVFTLILSVLLLGEKLTLKQLLGIVLILL 119

Query: 319 GLYCVLW 325
           G+  +L 
Sbjct: 120 GVLLILL 126

This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Length = 126

>gnl|CDD|216178 pfam00892, EamA, EamA-like transporter family

 Score = 46.8 bits (112), Expect = 1e-06
 Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 8/134 (5%)

Query: 17  FAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFV 76
            ++A   +  K  LER ++ L F  YR +IA +LL      L RK     S   +  +  
Sbjct: 1   LSWALYFVFSKKLLER-ISPLTFTAYRFLIAGILL-ILLLFLLRKPFALLSLKAILALLY 58

Query: 77  LALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVL 136
           L L G  +   +Y+  + YVS + A+ + ++ P FT +L+ LL  EK+ +       ++L
Sbjct: 59  LGLFGTALGYLLYFYALKYVSASNASVITSLSPVFTLILSVLLLGEKLTLK------QLL 112

Query: 137 GTIICVGGSLLFTL 150
           G ++ + G LL  L
Sbjct: 113 GIVLILLGVLLILL 126

This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Length = 126

>gnl|CDD|233205 TIGR00950, 2A78, Carboxylate/Amino Acid/Amine Transporter

 Score = 39.2 bits (92), Expect = 0.002
 Identities = 57/300 (19%), Positives = 115/300 (38%), Gaps = 45/300 (15%)

Query: 22  SNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLG 81
           + +++   LE  +     V  R + A+LLL P        +R          + +L  L 
Sbjct: 4   TGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRRPPLKRLLR-------LLLLGALQ 56

Query: 82  ATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIIC 141
             +   +Y++ +  +    A  L  + P +  LL+ L+G E+ +         +L  ++ 
Sbjct: 57  IGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKL------VLLAAVLG 110

Query: 142 VGGSLLFTLWRSGYLFKSVVEKPLINIYNNNADHLRHHGKENWIKGSALILTSHIALSSW 201
           + G++L                    + + N              G  L L S I+ +  
Sbjct: 111 LAGAVLL-------------------LSDGNLSIN--------PAGLLLGLGSGISFALG 143

Query: 202 LILQAKVFKEYPAPLSMNTLICFF-ASLQTSFLALFFGRNPTIWKLDWNVQFLTVMYCGV 260
            +L  ++ K+    L   T       +L     A F G NP       ++Q+  ++Y G+
Sbjct: 144 TVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNPQAL----SLQWGALLYLGL 199

Query: 261 LNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGL 320
           + +AL Y+L    +++  P   ++    + ++  L  ++   E L L  LIG   I+A +
Sbjct: 200 IGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259

[Transport and binding proteins, Amino acids, peptides and amines]. Length = 260

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	359
PLN00411	358	nodulin MtN21 family protein; Provisional	100.0
PRK11272	292	putative DMT superfamily transporter inner membran	100.0
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	100.0
PRK10532	293	threonine and homoserine efflux system; Provisiona	100.0
PRK11689	295	aromatic amino acid exporter; Provisional	100.0
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	100.0
PRK15430	296	putative chloramphenical resistance permease RarD;	99.98
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.97
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.96
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.96
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.95
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.95
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.93
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.93
COG2962	293	RarD Predicted permeases [General function predict	99.91
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.9
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.88
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.86
KOG2765	416	consensus Predicted membrane protein [Function unk	99.79
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.73
KOG2766	336	consensus Predicted membrane protein [Function unk	99.72
COG2510	140	Predicted membrane protein [Function unknown]	99.68
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.68
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.64
KOG1580	337	consensus UDP-galactose transporter related protei	99.63
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.6
KOG1581	327	consensus UDP-galactose transporter related protei	99.6
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.57
COG2510	140	Predicted membrane protein [Function unknown]	99.56
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.54
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.4
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.39
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	99.37
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	99.37
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.33
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	99.32
PRK13499	345	rhamnose-proton symporter; Provisional	99.3
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.28
PF13536	113	EmrE: Multidrug resistance efflux transporter	99.25
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.21
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.16
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.13
PLN00411	358	nodulin MtN21 family protein; Provisional	99.1
PRK11272	292	putative DMT superfamily transporter inner membran	99.09
PRK15430	296	putative chloramphenical resistance permease RarD;	99.06
KOG1582	367	consensus UDP-galactose transporter related protei	99.05
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	99.02
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.02
PRK11689	295	aromatic amino acid exporter; Provisional	99.01
KOG2922	335	consensus Uncharacterized conserved protein [Funct	99.0
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.98
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	98.93
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.89
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.84
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.81
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.8
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	98.75
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.74
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.69
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.64
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.61
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.59
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.47
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.42
COG2962	293	RarD Predicted permeases [General function predict	98.42
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	98.33
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	98.3
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	98.09
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	98.04
KOG4510	346	consensus Permease of the drug/metabolite transpor	98.03
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	98.0
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	97.94
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.87
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.84
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	97.8
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.69
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.67
COG2076	106	EmrE Membrane transporters of cations and cationic	97.64
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.63
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.62
PRK11431	105	multidrug efflux system protein; Provisional	97.56
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	97.49
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	97.48
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	97.47
COG2076	106	EmrE Membrane transporters of cations and cationic	97.35
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	97.34
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	97.3
PRK11431	105	multidrug efflux system protein; Provisional	97.29
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.28
KOG2765	416	consensus Predicted membrane protein [Function unk	97.1
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.99
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.96
KOG2922	335	consensus Uncharacterized conserved protein [Funct	96.74
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	96.45
KOG1581	327	consensus UDP-galactose transporter related protei	96.42
PRK13499	345	rhamnose-proton symporter; Provisional	96.37
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	96.35
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	96.23
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	96.14
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	95.96
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	95.75
KOG1580	337	consensus UDP-galactose transporter related protei	95.35
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	95.28
KOG1443	349	consensus Predicted integral membrane protein [Fun	93.98
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	93.43
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	93.04
KOG4831	125	consensus Unnamed protein [Function unknown]	92.41
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	91.11
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	90.83
PRK02237	109	hypothetical protein; Provisional	90.44
KOG2766	336	consensus Predicted membrane protein [Function unk	89.3
PF02694	107	UPF0060: Uncharacterised BCR, YnfA/UPF0060 family;	87.63
PF07168	336	Ureide_permease: Ureide permease; InterPro: IPR009	86.46
COG1742	109	Uncharacterized conserved protein [Function unknow	85.66
KOG3912	372	consensus Predicted integral membrane protein [Gen	85.61

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=100.00  E-value=9e-37  Score=282.45  Aligned_cols=319  Identities=29%  Similarity=0.588  Sum_probs=250.1

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhcc-CCCCCCCHHHHHHHHHHHHHHH
Q 018219            4 KAYIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLER-KQRPKPSFAVMAKIFVLALLGA   82 (359)
Q Consensus         4 ~~~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~   82 (359)
                      |+.+.+..++...+.++...++.|.+.+.|++|..+.++|+.++++++.++...++| +.+++.+++++..+.+.|+++ 
T Consensus        10 ~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g-   88 (358)
T PLN00411         10 REAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLG-   88 (358)
T ss_pred             hccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHH-
Confidence            557889999999999999999999999999999999999999999999999876544 333445678889999999999 


Q ss_pred             HHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhc------ccccccccccccccchhHHHHHHHHHHHhhhccCcc
Q 018219           83 TIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLG------MEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYL  156 (359)
Q Consensus        83 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~------~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~  156 (359)
                      ..++.+++.|++|++++.++++.++.|+++++++++++      +||+++++      ++|++++++|+.++...++...
T Consensus        89 ~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~------~~G~~l~~~Gv~ll~~~~g~~~  162 (358)
T PLN00411         89 SMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAK------VMGTILSLIGALVVIFYHGPRV  162 (358)
T ss_pred             HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHH------HHHHHHHHHHHHHHHHccCccc
Confidence            78888999999999999999999999999999999994      67766666      9999999999999875443211


Q ss_pred             cccccccccccccCCCccc-ccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHH
Q 018219          157 FKSVVEKPLINIYNNNADH-LRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLAL  235 (359)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (359)
                      ..+..    ++..|...+. ....+..+...|+++++.++++|++|++.+|+..++++++...+.+++.++.+...+...
T Consensus       163 ~~~~~----~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l  238 (358)
T PLN00411        163 FVASS----PPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGL  238 (358)
T ss_pred             ccccc----cccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHH
Confidence            00000    0000000000 001122345679999999999999999999999888766667777888877777766666


Q ss_pred             HhcC-CCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHH
Q 018219          236 FFGR-NPTIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAF  314 (359)
Q Consensus       236 ~~~~-~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~  314 (359)
                      ..++ +...|..........+++.++. +.++|.+|++++++.+|++++.+.+++|+++++++++++||++++.+++|++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~i~y~~i~-t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~  317 (358)
T PLN00411        239 VVEKNNPSVWIIHFDITLITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGI  317 (358)
T ss_pred             HHccCCcccceeccchHHHHHHHHHHH-HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHH
Confidence            5443 2223322122234457777755 5689999999999999999999999999999999999999999999999999


Q ss_pred             HHhhhhheeeeccCCCCccC
Q 018219          315 FIVAGLYCVLWGKRKDSLAA  334 (359)
Q Consensus       315 li~~gv~l~~~~~~~~~~~~  334 (359)
                      +|++|+++..+.++++.|++
T Consensus       318 LIl~Gv~l~~~~~~~~~~~~  337 (358)
T PLN00411        318 LITLGFYAVMWGKANEEKDQ  337 (358)
T ss_pred             HHHHHHHHHHhhhhhhhhhc
Confidence            99999999987766654443

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=100.00  E-value=4e-32  Score=247.44  Aligned_cols=278  Identities=18%  Similarity=0.187  Sum_probs=232.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 018219            9 YMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIHINV   88 (359)
Q Consensus         9 ~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~   88 (359)
                      +++.+...++||.+++++|...+ +++|.+++++|+.++.++++++...++ ++  ..+++++......|.++...++.+
T Consensus        10 ~~~~~~~~~iWg~~~~~~K~~~~-~~~p~~~~~~R~~~a~l~ll~~~~~~~-~~--~~~~~~~~~~~~~g~~~~~~~~~~   85 (292)
T PRK11272         10 FGALFALYIIWGSTYLVIRIGVE-SWPPLMMAGVRFLIAGILLLAFLLLRG-HP--LPTLRQWLNAALIGLLLLAVGNGM   85 (292)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHhc-cCCHHHHHHHHHHHHHHHHHHHHHHhC-CC--CCcHHHHHHHHHHHHHHHHHHHHH
Confidence            56678889999999999999888 599999999999999999888865432 22  235678888888998876788889


Q ss_pred             HHHHh-hccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCccccccccccccc
Q 018219           89 YYIGM-DYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLIN  167 (359)
Q Consensus        89 ~~~al-~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~  167 (359)
                      ++.+. ++++++.++++.++.|+++++++++ +|||+++++      ++|++++++|+.++... +. .           
T Consensus        86 ~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~------~~~~~la~~Gv~ll~~~-~~-~-----------  145 (292)
T PRK11272         86 VTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLE------WLGIAIGLAGIVLLNSG-GN-L-----------  145 (292)
T ss_pred             HHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhH------HHHHHHHHHhHHHHhcC-cc-c-----------
Confidence            99999 9999999999999999999999986 699999998      99999999999988621 11 1           


Q ss_pred             ccCCCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccc
Q 018219          168 IYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWKLD  247 (359)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (359)
                                    .....|++++++++++||.|.+..|+..++  ++...+.+++..+.+...+.....+.+...  ..
T Consensus       146 --------------~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~  207 (292)
T PRK11272        146 --------------SGNPWGAILILIASASWAFGSVWSSRLPLP--VGMMAGAAEMLAAGVVLLIASLLSGERLTA--LP  207 (292)
T ss_pred             --------------ccchHHHHHHHHHHHHHHHHHHHHHhcCCC--cchHHHHHHHHHHHHHHHHHHHHcCCcccc--cC
Confidence                          112479999999999999999999997644  345667788888888777776543322111  12


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeeecc
Q 018219          248 WNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGK  327 (359)
Q Consensus       248 ~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~  327 (359)
                      +...|..+++.+++++.+++.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++++.|+++..+.+
T Consensus       208 ~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~  287 (292)
T PRK11272        208 TLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGK  287 (292)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence            33578899999999999999999999999999999999999999999999999999999999999999999999887654


Q ss_pred             C
Q 018219          328 R  328 (359)
Q Consensus       328 ~  328 (359)
                      +
T Consensus       288 ~  288 (292)
T PRK11272        288 Y  288 (292)
T ss_pred             h
Confidence            4

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=100.00  E-value=1.2e-31  Score=244.99  Aligned_cols=280  Identities=15%  Similarity=0.171  Sum_probs=217.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 018219            8 PYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIHIN   87 (359)
Q Consensus         8 ~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   87 (359)
                      ..++.++++++||.+++++|...++ ++|..++++|+.++++.+.++..   +++   .++   ......|.+.......
T Consensus         5 ~~l~~l~~~~~Wg~~~~~~k~~~~~-~~p~~~~~~R~~~a~~~l~~~~~---~~~---~~~---~~~~~~g~~~~~~~~~   74 (299)
T PRK11453          5 DGVLALLVVVVWGLNFVVIKVGLHN-MPPLMLAGLRFMLVAFPAIFFVA---RPK---VPL---NLLLGYGLTISFGQFA   74 (299)
T ss_pred             HHHHHHHHHHHHhhhHHHHHHHHhc-CCHHHHHHHHHHHHHHHHHHHhc---CCC---Cch---HHHHHHHHHHHHHHHH
Confidence            3467889999999999999999985 99999999999998776655431   111   112   2344456655456666


Q ss_pred             HHHHHhhc-cCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCcccccccccccc
Q 018219           88 VYYIGMDY-VSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLI  166 (359)
Q Consensus        88 ~~~~al~~-~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~  166 (359)
                      +++.+++| .+++.++++.++.|+++.+++++++|||+++++      ++|++++++|+.++..  +...+         
T Consensus        75 ~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~------~~~~~l~~~Gv~ll~~--~~~~~---------  137 (299)
T PRK11453         75 FLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQ------LAGIALAIFGVLVLIE--DSLNG---------  137 (299)
T ss_pred             HHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHH------HHHHHHHHHhHHHhcc--ccCCC---------
Confidence            78889998 588999999999999999999999999999999      9999999999998872  11111         


Q ss_pred             cccCCCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCc--hhHHHHHHHHHHHHHHHHHHHhcCCC---
Q 018219          167 NIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAP--LSMNTLICFFASLQTSFLALFFGRNP---  241 (359)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~---  241 (359)
                                    ......|+++++.++++|+.|.++.|+..++.+++  .....+....+.+.........+.+.   
T Consensus       138 --------------~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (299)
T PRK11453        138 --------------QHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMI  203 (299)
T ss_pred             --------------cchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhh
Confidence                          11224799999999999999999999987654332  23344444444443333333333211   


Q ss_pred             cccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhh
Q 018219          242 TIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLY  321 (359)
Q Consensus       242 ~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~  321 (359)
                      ..+...+...|..++++|+++++++|.+|++++++.++.+++.+.+++|+++.+++++++||++++.+++|++++++|++
T Consensus       204 ~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~  283 (299)
T PRK11453        204 HSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLY  283 (299)
T ss_pred             hhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHH
Confidence            11112233478999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeeeccC
Q 018219          322 CVLWGKR  328 (359)
Q Consensus       322 l~~~~~~  328 (359)
                      +..+.++
T Consensus       284 l~~~~~~  290 (299)
T PRK11453        284 INVFGLR  290 (299)
T ss_pred             HHhcchh
Confidence            8876654

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=100.00  E-value=7.2e-31  Score=239.18  Aligned_cols=280  Identities=13%  Similarity=0.100  Sum_probs=225.4

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHH
Q 018219            4 KAYIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGAT   83 (359)
Q Consensus         4 ~~~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   83 (359)
                      ++.+++.+++++.++|+.++.+.|+..++ ++|.+++++|++++++++.++...  ++  ++.+++++...+..|.+. .
T Consensus         9 ~~~~~~~~~~la~~~~~~~~~~~K~~~~~-~~~~~~~~~R~~~a~l~l~~~~~~--~~--~~~~~~~~~~~~~~g~~~-~   82 (293)
T PRK10532          9 PVWLPILLLLIAMASIQSGASLAKSLFPL-VGAPGVTALRLALGTLILIAIFKP--WR--LRFAKEQRLPLLFYGVSL-G   82 (293)
T ss_pred             ccchHHHHHHHHHHHHHhhHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHhH--Hh--ccCCHHHHHHHHHHHHHH-H
Confidence            67899999999999999999999999996 999999999999999888776432  11  124568888888888876 8


Q ss_pred             HHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCccccccccc
Q 018219           84 IHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEK  163 (359)
Q Consensus        84 ~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~  163 (359)
                      ..+.+++++++|+|++.++++.++.|+++.+++.    |+..  +      ..++.++++|+.++.. .+...+      
T Consensus        83 ~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~--~------~~~~~i~~~Gv~li~~-~~~~~~------  143 (293)
T PRK10532         83 GMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPV--D------FVWVVLAVLGLWFLLP-LGQDVS------  143 (293)
T ss_pred             HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChH--H------HHHHHHHHHHHheeee-cCCCcc------
Confidence            8889999999999999999999999999998873    4432  2      5667788999988752 111111      


Q ss_pred             ccccccCCCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcc
Q 018219          164 PLINIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTI  243 (359)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (359)
                                        .....|+++++.++++|+.|.+..|+..++. ++... .+....+.++..+.....+.   .
T Consensus       144 ------------------~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~-~~~~~-~~~~~~~~~~l~~~~~~~~~---~  200 (293)
T PRK10532        144 ------------------HVDLTGAALALGAGACWAIYILSGQRAGAEH-GPATV-AIGSLIAALIFVPIGALQAG---E  200 (293)
T ss_pred             ------------------cCChHHHHHHHHHHHHHHHHHHHHHHHhccC-CchHH-HHHHHHHHHHHHHHHHHccC---c
Confidence                              1124799999999999999999999998774 55555 45666667666666654321   1


Q ss_pred             cccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhhee
Q 018219          244 WKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCV  323 (359)
Q Consensus       244 ~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~  323 (359)
                      .. .+...|..++++|++++.++|.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++|++|++..
T Consensus       201 ~~-~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~  279 (293)
T PRK10532        201 AL-WHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGS  279 (293)
T ss_pred             cc-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHH
Confidence            11 12235666789999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             eeccCCCCc
Q 018219          324 LWGKRKDSL  332 (359)
Q Consensus       324 ~~~~~~~~~  332 (359)
                      .+..+++.|
T Consensus       280 ~~~~~~~~~  288 (293)
T PRK10532        280 TLTIRREPK  288 (293)
T ss_pred             HhcCCCCCC
Confidence            766554433

>PRK11689 aromatic amino acid exporter; Provisional

Probab=100.00  E-value=1.8e-31  Score=243.42  Aligned_cols=285  Identities=12%  Similarity=0.025  Sum_probs=215.4

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHH
Q 018219            5 AYIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATI   84 (359)
Q Consensus         5 ~~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   84 (359)
                      +.+++++++++.++||.+++..|...+. ++|..+.++|+.++.+++.++..   +++.+    +++++..+.+.+....
T Consensus         2 ~~~~~l~~l~a~~~Wg~~~~~~k~~~~~-~~P~~~~~~R~~~a~l~l~~~~~---~~~~~----~~~~~~~~~~~l~~~~   73 (295)
T PRK11689          2 SQKATLIGLIAILLWSTMVGLIRGVSES-LGPVGGAAMIYSVSGLLLLLTVG---FPRLR----QFPKRYLLAGGLLFVS   73 (295)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHHcc-CChHHHHHHHHHHHHHHHHHHcc---ccccc----cccHHHHHHHhHHHHH
Confidence            4677889999999999999999999985 99999999999999988877631   11111    1222334455555578


Q ss_pred             HHHHHHHHhhc----cCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCcccccc
Q 018219           85 HINVYYIGMDY----VSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSV  160 (359)
Q Consensus        85 ~~~~~~~al~~----~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~  160 (359)
                      ++.+++.+++|    .++.+++++.++.|+++++++++++|||+++++      ++|++++++|++++...+ ...+   
T Consensus        74 ~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~------~~g~~l~~~Gv~li~~~~-~~~~---  143 (295)
T PRK11689         74 YEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLL------IPGLLLALAGVAWVLGGD-NGLS---  143 (295)
T ss_pred             HHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHH------HHHHHHHHHhHhheecCC-ccch---
Confidence            88888888765    577888899999999999999999999999998      999999999999987321 1111   


Q ss_pred             cccccccccCCCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCC
Q 018219          161 VEKPLINIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRN  240 (359)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (359)
                         .         ++ ..++......|+++++.++++||.|+++.|+..++. ++....   ...+.+...+.....+ +
T Consensus       144 ---~---------~~-~~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~-~~~~~~---~~~~~~~l~~~~~~~~-~  205 (295)
T PRK11689        144 ---L---------AE-LINNIASNPLSYGLAFIGAFIWAAYCNVTRKYARGK-NGITLF---FILTALALWIKYFLSP-Q  205 (295)
T ss_pred             ---h---------hh-hhhccccChHHHHHHHHHHHHHHHHHHHHhhccCCC-CchhHH---HHHHHHHHHHHHHHhc-C
Confidence               0         00 000111234699999999999999999999987764 555432   2233333333333222 1


Q ss_pred             CcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhh
Q 018219          241 PTIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGL  320 (359)
Q Consensus       241 ~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv  320 (359)
                      . ... .+...|..+++.+ ++++++|.+|++++|+.++++++.+.+++|+++.+++++++||++++.+++|+++|+.|+
T Consensus       206 ~-~~~-~~~~~~~~l~~~~-~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv  282 (295)
T PRK11689        206 P-AMV-FSLPAIIKLLLAA-AAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGS  282 (295)
T ss_pred             c-ccc-CCHHHHHHHHHHH-HHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhH
Confidence            1 111 2234677777877 578999999999999999999999999999999999999999999999999999999999


Q ss_pred             heeeeccC
Q 018219          321 YCVLWGKR  328 (359)
Q Consensus       321 ~l~~~~~~  328 (359)
                      .+....++
T Consensus       283 ~~~~~~~~  290 (295)
T PRK11689        283 LLCWLATR  290 (295)
T ss_pred             HHHhhhHh
Confidence            88765443

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=100.00  E-value=1.8e-30  Score=233.05  Aligned_cols=259  Identities=22%  Similarity=0.368  Sum_probs=219.7

Q ss_pred             HHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCc
Q 018219           19 FAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIHINVYYIGMDYVSP   98 (359)
Q Consensus        19 ~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~   98 (359)
                      ||.+++..|...+...|+....+.|+..+.+++.++...  +     .+++++.+....|.++..+++.+++.|++|+++
T Consensus         1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~--~-----~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~   73 (260)
T TIGR00950         1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRR--R-----PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPV   73 (260)
T ss_pred             CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHh--c-----cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence            899999999988766899999999999998888776443  2     235677788888888889999999999999999


Q ss_pred             hhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCcccccccccccccccCCCcccccc
Q 018219           99 TVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLINIYNNNADHLRH  178 (359)
Q Consensus        99 ~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (359)
                      ++++++.++.|+++++++++++|||+++++      ++|+.++++|+.++.. ++.  .                     
T Consensus        74 ~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~------~~gi~i~~~Gv~li~~-~~~--~---------------------  123 (260)
T TIGR00950        74 GEAALLLYLAPLYVTLLSDLMGKERPRKLV------LLAAVLGLAGAVLLLS-DGN--L---------------------  123 (260)
T ss_pred             hhhHHHHhhhHHHHHHHHHHHccCCCcHHH------HHHHHHHHHhHHhhcc-CCc--c---------------------
Confidence            999999999999999999999999999998      9999999999999862 211  1                     


Q ss_pred             cCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCC-CchhHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHH
Q 018219          179 HGKENWIKGSALILTSHIALSSWLILQAKVFKEYP-APLSMNTLICFFASLQTSFLALFFGRNPTIWKLDWNVQFLTVMY  257 (359)
Q Consensus       179 ~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  257 (359)
                         .....|+.+++.++++|+.+.+..|+..++.+ ++.....+.+..+.++..+.....+++. ..   +...|..+++
T Consensus       124 ---~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~---~~~~~~~~~~  196 (260)
T TIGR00950       124 ---SINPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP-QA---LSLQWGALLY  196 (260)
T ss_pred             ---cccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-Cc---chHHHHHHHH
Confidence               12357999999999999999999999987643 2334555778888888877776543221 11   3347778889


Q ss_pred             HHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhh
Q 018219          258 CGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLY  321 (359)
Q Consensus       258 ~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~  321 (359)
                      .+++++.+++.++++++++.++++++.+.+++|+++.+++++++||++++.+++|+++++.|++
T Consensus       197 ~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~  260 (260)
T TIGR00950       197 LGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL  260 (260)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence            9999999999999999999999999999999999999999999999999999999999999863

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.98  E-value=1.1e-30  Score=238.24  Aligned_cols=281  Identities=9%  Similarity=0.037  Sum_probs=209.6

Q ss_pred             CCC-cchHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCCC--CC-CCHHHHHHHHH
Q 018219            1 MNM-KAYIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQR--PK-PSFAVMAKIFV   76 (359)
Q Consensus         1 M~~-~~~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~--~~-~~~~~~~~~~~   76 (359)
                      |+| ++.+|.++++++.++||..+++.|.. + +++|.+++++|+.++.+++.++...+++++.  ++ .+++++.. ..
T Consensus         1 ~~~~~~~~g~~~~l~a~~~wg~~~~~~k~~-~-~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~   77 (296)
T PRK15430          1 MDAKQTRQGVLLALAAYFIWGIAPAYFKLI-Y-YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFM-LA   77 (296)
T ss_pred             CCchhhhhHHHHHHHHHHHHHHHHHHHHHh-c-CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHH-HH
Confidence            555 56789999999999999999999975 5 4999999999999999888777554322111  00 12344333 33


Q ss_pred             HHHHHHHHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCcc
Q 018219           77 LALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYL  156 (359)
Q Consensus        77 ~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~  156 (359)
                      .+.++...++.++++|++++|+++++++.++.|+++++++++++|||+++++      ++|++++++|+.++...++   
T Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~------~~g~~l~~~Gv~li~~~~~---  148 (296)
T PRK15430         78 VSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQ------WLAVILAICGVLVQLWTFG---  148 (296)
T ss_pred             HHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHH------HHHHHHHHHHHHHHHHHcC---
Confidence            6666668999999999999999999999999999999999999999999999      9999999999999863211   


Q ss_pred             cccccccccccccCCCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCC-CchhHHHHHHHHHHHHHHHHHH
Q 018219          157 FKSVVEKPLINIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYP-APLSMNTLICFFASLQTSFLAL  235 (359)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  235 (359)
                      +                        .     ..+++.++++|+.|.+..|+..++.. +....+.+....+.+...+.  
T Consensus       149 ~------------------------~-----~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  197 (296)
T PRK15430        149 S------------------------L-----PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAI--  197 (296)
T ss_pred             C------------------------c-----cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHH--
Confidence            1                        0     14688899999999999988754311 11222333333333222111  


Q ss_pred             HhcCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHH
Q 018219          236 FFGRNPTIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFF  315 (359)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~l  315 (359)
                       .......+...+...+..+...| +.+.++|.++++++++.+++.++.+.+++|+++.+++++++||++++.+++|+++
T Consensus       198 -~~~~~~~~~~~~~~~~~~~~~~g-~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~l  275 (296)
T PRK15430        198 -ADSSTSHMGQNPMSLNLLLIAAG-IVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAF  275 (296)
T ss_pred             -ccCCcccccCCcHHHHHHHHHHH-HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence             11111111111111233444445 4678999999999999999999999999999999999999999999999999999


Q ss_pred             Hhhhhheeeec
Q 018219          316 IVAGLYCVLWG  326 (359)
Q Consensus       316 i~~gv~l~~~~  326 (359)
                      |++|+.+....
T Consensus       276 I~~~~~v~~~~  286 (296)
T PRK15430        276 IWVALAIFVMD  286 (296)
T ss_pred             HHHHHHHHHHH
Confidence            99888777644

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.97  E-value=5.2e-29  Score=228.23  Aligned_cols=283  Identities=16%  Similarity=0.099  Sum_probs=219.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 018219           11 AIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIHINVYY   90 (359)
Q Consensus        11 ~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~   90 (359)
                      +..+.-.+-....+..|..++.-.+|..++++|+.++.+.+.+.... ..+++++.++++++.++..|++. ..+..+.+
T Consensus         6 ~~~~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~   83 (302)
T TIGR00817         6 LFGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSS-GLPKRLKISSALLKLLLPVAIVH-TIGHVTSN   83 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHHHH-HHHHHHHH
Confidence            34444444455567889999853669999999999987776555211 22334457789999999999998 99999999


Q ss_pred             HHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCcccccccccccccccC
Q 018219           91 IGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLINIYN  170 (359)
Q Consensus        91 ~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~  170 (359)
                      .+++|++++.++++.++.|+++++++++++|||+++++      ++|++++++|+.+..  .++ .              
T Consensus        84 ~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~------~~~l~l~~~Gv~l~~--~~~-~--------------  140 (302)
T TIGR00817        84 VSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTL------WLSLLPIVGGVALAS--DTE-L--------------  140 (302)
T ss_pred             HHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHhhhc--CCc-c--------------
Confidence            99999999999999999999999999999999999998      999999999998764  111 1              


Q ss_pred             CCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhh--hCCCchhHHHHHHHHHHHHHHHHHHHhcCCCc-c--cc
Q 018219          171 NNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFK--EYPAPLSMNTLICFFASLQTSFLALFFGRNPT-I--WK  245 (359)
Q Consensus       171 ~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~  245 (359)
                                 +....|++++++++++|++|.+..|+..+  +. +|...+.+++..+.+.+.|.....+.... .  +.
T Consensus       141 -----------~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~-~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~  208 (302)
T TIGR00817       141 -----------SFNWAGFLSAMISNITFVSRNIFSKKAMTIKSL-DKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFM  208 (302)
T ss_pred             -----------cccHHHHHHHHHHHHHHHHHHHHHHHhhccCCC-CcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHH
Confidence                       11246999999999999999999999887  53 67899999999999999988776543111 0  00


Q ss_pred             c-----chhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhh
Q 018219          246 L-----DWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGL  320 (359)
Q Consensus       246 ~-----~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv  320 (359)
                      .     .....+......+..+....+.+++.++++.++++.++...++|+++++++++++||+++..+++|++++++|+
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv  288 (302)
T TIGR00817       209 QAISGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGV  288 (302)
T ss_pred             HhhcccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHH
Confidence            0     00011222223332233333446668999999999999999999999999999999999999999999999999


Q ss_pred             heeeeccCCC
Q 018219          321 YCVLWGKRKD  330 (359)
Q Consensus       321 ~l~~~~~~~~  330 (359)
                      .++.+.|.++
T Consensus       289 ~l~~~~k~~~  298 (302)
T TIGR00817       289 FLYSRVKAQK  298 (302)
T ss_pred             HHHHHHhccC
Confidence            9998655433

specificities overlap.

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.96  E-value=1.8e-27  Score=215.94  Aligned_cols=301  Identities=16%  Similarity=0.183  Sum_probs=243.1

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHHHHHHHHhhhccC-CCCCCCHHHHHHHHHHHHHHH
Q 018219            5 AYIPYMAIIFNQFAFAGSNILMKIALERGLN-QLVFVVYRHVIAMLLLGPFAYVLERK-QRPKPSFAVMAKIFVLALLGA   82 (359)
Q Consensus         5 ~~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~-p~~~~~~r~~~a~l~l~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~   82 (359)
                      ..+..++.-+.+++-..+...+..+.+.|.+ |....++.+..-.++..+....++++ ++.+..+++|+++++.+++- 
T Consensus        11 ~~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~D-   89 (334)
T PF06027_consen   11 FWIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLD-   89 (334)
T ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHH-
Confidence            4566777788888899999999988776666 88888888888888887776665432 33334457888888899999 


Q ss_pred             HHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCcccccccc
Q 018219           83 TIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVE  162 (359)
Q Consensus        83 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~  162 (359)
                      +.++.+.+.|++|++.+.++++.+++.+++++++++++|+|.++.+      ++|+++++.|+.++...+....+     
T Consensus        90 v~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~------~~gv~i~i~Gv~lv~~sD~~~~~-----  158 (334)
T PF06027_consen   90 VEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFH------ILGVLICIAGVVLVVVSDVLSGS-----  158 (334)
T ss_pred             HHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHH------HHHHHHHHhhhhheeeecccccc-----
Confidence            9999999999999999999999999999999999999999999999      99999999999998754422111     


Q ss_pred             cccccccCCCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCC-
Q 018219          163 KPLINIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNP-  241 (359)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  241 (359)
                                    +..+..+..+|+++++.++++||+++++.++..++. ++........+++.++..+.....+.+. 
T Consensus       159 --------------~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~-~~~~~lg~~Glfg~ii~~iq~~ile~~~i  223 (334)
T PF06027_consen  159 --------------DSSSGSNPILGDLLALLGAILYAVSNVLEEKLVKKA-PRVEFLGMLGLFGFIISGIQLAILERSGI  223 (334)
T ss_pred             --------------cCCCCCccchhHHHHHHHHHHHHHHHHHHHHhcccC-CHHHHHHHHHHHHHHHHHHHHHheehhhh
Confidence                          012345678999999999999999999999999984 5678888888888888888877766532 


Q ss_pred             cccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhh
Q 018219          242 TIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLY  321 (359)
Q Consensus       242 ~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~  321 (359)
                      ...++.+. .+..++ ...++...-|.+....++..+|+...+-..+..+++++++++++|+.+++..++|.++|+.|.+
T Consensus       224 ~~~~w~~~-~~~~~v-~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~v  301 (334)
T PF06027_consen  224 ESIHWTSQ-VIGLLV-GYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFV  301 (334)
T ss_pred             hccCCChh-hHHHHH-HHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhh
Confidence            22222222 233222 2235667788888899999999999999999999999999999999999999999999999999


Q ss_pred             eeeeccCCCCccC
Q 018219          322 CVLWGKRKDSLAA  334 (359)
Q Consensus       322 l~~~~~~~~~~~~  334 (359)
                      ++...+++.+++.
T Consensus       302 vy~~~~~~~~~~~  314 (334)
T PF06027_consen  302 VYNLAESPEEEAR  314 (334)
T ss_pred             eEEccCCcccccc
Confidence            9998776554443

Some of the sequences in this family are annotated as putative membrane proteins.

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.96  E-value=2.4e-27  Score=214.91  Aligned_cols=275  Identities=17%  Similarity=0.173  Sum_probs=202.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhc-cCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 018219            8 PYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLE-RKQRPKPSFAVMAKIFVLALLGATIHI   86 (359)
Q Consensus         8 ~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~   86 (359)
                      .+++.++++++|+..++.+|...++ -++  ..+++.....+.+.++...+. ++.++..+++ ++.....+.++...++
T Consensus         2 ~~~~~~~aa~~~a~~~~~~k~~~~~-~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~   77 (281)
T TIGR03340         2 ALTLVVFSALMHAGWNLMAKSHADK-EPD--FLWWALLAHSVLLTPYGLWYLAQVGWSRLPAT-FWLLLAISAVANMVYF   77 (281)
T ss_pred             cHHHHHHHHHHHHHHHHHHhhcCCc-hhH--HHHHHHHHHHHHHHHHHHHhcccCCCCCcchh-hHHHHHHHHHHHHHHH
Confidence            3577899999999999999966553 344  347777777777777765532 2233333334 4444444555559999


Q ss_pred             HHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCcccccccccccc
Q 018219           87 NVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLI  166 (359)
Q Consensus        87 ~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~  166 (359)
                      .+++.|+++.+++.++++.++.|+++++++++++|||+++++      ++|+.+++.|+.++...+   ..         
T Consensus        78 ~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~------~~g~~~~~~Gv~ll~~~~---~~---------  139 (281)
T TIGR03340        78 LGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLA------WLGILIITLGLLVLGLSR---FA---------  139 (281)
T ss_pred             HHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHH------HHHHHHHHHHHHHHhccc---cc---------
Confidence            999999999999999999999999999999999999999999      999999999999886311   11         


Q ss_pred             cccCCCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchh---HHHHHHHHHHHHHHHHHHHhcCCCcc
Q 018219          167 NIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLS---MNTLICFFASLQTSFLALFFGRNPTI  243 (359)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (359)
                                     .....|+.+++.++++|+.|.+..|+..++.++...   ...+.+....+...+.....+.  ..
T Consensus       140 ---------------~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~  202 (281)
T TIGR03340       140 ---------------QHRRKAYAWALAAALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHG--RS  202 (281)
T ss_pred             ---------------ccchhHHHHHHHHHHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHHHHHhc--cc
Confidence                           112357889999999999999998886544322111   1222222221111111111111  11


Q ss_pred             cccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhhe
Q 018219          244 WKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYC  322 (359)
Q Consensus       244 ~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l  322 (359)
                      +.. ....+..+.+.+.+++.++|.+|++++++.+++.++.+.+++|+++.+++++++||+++..+++|++++++|+.+
T Consensus       203 ~~~-~~~~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       203 MFP-YARQILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             hhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            111 122455667777788999999999999999999999999999999999999999999999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.95  E-value=4.5e-26  Score=211.98  Aligned_cols=284  Identities=18%  Similarity=0.158  Sum_probs=222.4

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHHHHHHHHhhhccCCCCCC--CHHHHHHHHHHHHHH
Q 018219            5 AYIPYMAIIFNQFAFAGSNILMKIALERGLN-QLVFVVYRHVIAMLLLGPFAYVLERKQRPKP--SFAVMAKIFVLALLG   81 (359)
Q Consensus         5 ~~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~-p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~   81 (359)
                      +.+...+.+..-.+-.......|..++. ++ |..++++|++++.++........ .+++++.  .++++...+..|+++
T Consensus        47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~~-~~~P~~l~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~llp~gl~~  124 (350)
T PTZ00343         47 KWKLALLFLTWYALNVLYVVDNKLALNM-LPLPWTISSLQLFVGWLFALLYWATG-FRKIPRIKSLKLFLKNFLPQGLCH  124 (350)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCCCCHHHHHHHHHHHHHHH
Confidence            3455666666667777788899999986 99 99999999999987765554332 2222333  346788899999999


Q ss_pred             HHHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCccccccc
Q 018219           82 ATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVV  161 (359)
Q Consensus        82 ~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~  161 (359)
                       ...+...+.|+++++++.++++.++.|+++++++++++|||+++++      +++++++++|+++.+.  + +.+    
T Consensus       125 -~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~------~l~l~l~v~Gv~l~~~--~-~~~----  190 (350)
T PTZ00343        125 -LFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYA------YLSLIPIVGGVALASV--K-ELH----  190 (350)
T ss_pred             -HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHH------HHHHHHHHHHHHheec--c-cch----
Confidence             5556667899999999999999999999999999999999999998      9999999999999872  1 111    


Q ss_pred             ccccccccCCCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCC------CchhHHHHHHHHHHHHHHHHHH
Q 018219          162 EKPLINIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYP------APLSMNTLICFFASLQTSFLAL  235 (359)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~  235 (359)
                                           ....|++++++|+++++.++++.|+..++.+      ++.....++...+.++++|...
T Consensus       191 ---------------------~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~  249 (350)
T PTZ00343        191 ---------------------FTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVL  249 (350)
T ss_pred             ---------------------hHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHH
Confidence                                 1257999999999999999999999887532      3444566668889999998887


Q ss_pred             HhcCCC--cccc----cchhhHHHHHHHHHHHHHHHHHHHHHH----HHhccCcceeeechhhHHHHHHHHHHHHhcCCC
Q 018219          236 FFGRNP--TIWK----LDWNVQFLTVMYCGVLNSALVYYLQTW----CISVKGPVFTAMFIPVQLVIVALFSIIAFAERL  305 (359)
Q Consensus       236 ~~~~~~--~~~~----~~~~~~~~~l~~~g~~~~~~~~~l~~~----a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~  305 (359)
                      +.+...  ..+.    ......+..+.+ .++.+++.+++++.    +++++++.+.++...++|+++++++++++||++
T Consensus       250 ~~e~~~~~~~~~~~~~~~~~~~~~~~l~-~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~l  328 (350)
T PTZ00343        250 FFEGKKWVPVWTNYTANMTNYTKGIIIF-KIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQV  328 (350)
T ss_pred             HHhhHHHHHHHHHhhhcccccchHHHHH-HHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCC
Confidence            554311  0110    001112233344 34667888888885    999999999999999999999999999999999


Q ss_pred             cchhhHhHHHHhhhhheeeec
Q 018219          306 HLSSLIGAFFIVAGLYCVLWG  326 (359)
Q Consensus       306 ~~~~~~G~~li~~gv~l~~~~  326 (359)
                      ++.+++|++++++|++++.+-
T Consensus       329 t~~~~iG~~lii~Gv~lYs~~  349 (350)
T PTZ00343        329 TLLGYLGMAVAILGALLYSLF  349 (350)
T ss_pred             chHhHHHHHHHHHHHHHHhhc
Confidence            999999999999999988654

>TIGR00688 rarD rarD protein

Probab=99.95  E-value=2.4e-25  Score=199.26  Aligned_cols=248  Identities=9%  Similarity=0.014  Sum_probs=184.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCC-----CCCCCHHH-HHHHHHHHHH
Q 018219            7 IPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQ-----RPKPSFAV-MAKIFVLALL   80 (359)
Q Consensus         7 ~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~-----~~~~~~~~-~~~~~~~g~~   80 (359)
                      +|++++++++++||.++++.|. .+ +++|.+++++|++++.+++.++...+++++     .++.++++ +......|++
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~-~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   79 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LK-PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL   79 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hc-cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence            4889999999999999999998 55 499999999999999988877654433211     11122233 4456667777


Q ss_pred             HHHHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCcccccc
Q 018219           81 GATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSV  160 (359)
Q Consensus        81 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~  160 (359)
                      . ..++.+++.|++++++++++++.++.|+++++++++++|||+++++      +++++++++|++++...+   .+   
T Consensus        80 ~-~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~------~l~~~~~~~Gv~li~~~~---~~---  146 (256)
T TIGR00688        80 I-GFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQ------FIAVIIATLGVISNIVLK---GS---  146 (256)
T ss_pred             H-HHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHc---CC---
Confidence            6 9999999999999999999999999999999999999999999999      999999999999886321   11   


Q ss_pred             cccccccccCCCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCC
Q 018219          161 VEKPLINIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRN  240 (359)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (359)
                                           .    . .+++.++++|+.|.+..|+..++ +. ...... .........+.....+. 
T Consensus       147 ---------------------~----~-~~~l~aa~~~a~~~i~~~~~~~~-~~-~~~~~~-~~~~~~~~~~~~~~~~~-  196 (256)
T TIGR00688       147 ---------------------L----P-WEALVLAFSFTAYGLIRKALKNT-DL-AGFCLE-TLSLMPVAIYYLLQTDF-  196 (256)
T ss_pred             ---------------------c----h-HHHHHHHHHHHHHHHHHhhcCCC-Cc-chHHHH-HHHHHHHHHHHHHHhcc-
Confidence                                 0    0 35788999999999999997653 22 222211 11222222212111111 


Q ss_pred             CcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHH
Q 018219          241 PTIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIA  300 (359)
Q Consensus       241 ~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~  300 (359)
                      .......+...|..+.+.|++ +.++|.++++++|+.+++.++.+.+++|+++.+++.+.
T Consensus       197 ~~~~~~~~~~~~~~l~~~g~~-t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       197 ATVQQTNPFPIWLLLVLAGLI-TGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             CcccccCchhHHHHHHHHHHH-HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            111111222378888888865 88999999999999999999999999999999999754

This uncharacterized protein is predicted to have many membrane-spanning domains.

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.93  E-value=8.7e-24  Score=177.86  Aligned_cols=275  Identities=16%  Similarity=0.103  Sum_probs=229.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 018219            8 PYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIHIN   87 (359)
Q Consensus         8 ~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   87 (359)
                      +++.++.+.+.--....+.|.+.+. +.+..++.+|..++++++.++...+    +.++++++|......|+.. ...|.
T Consensus        13 p~~~ll~amvsiq~Gas~Ak~LFP~-vG~~g~t~lRl~~aaLIll~l~RPw----r~r~~~~~~~~~~~yGvsL-g~MNl   86 (292)
T COG5006          13 PILALLVAMVSIQSGASFAKSLFPL-VGAAGVTALRLAIAALILLALFRPW----RRRLSKPQRLALLAYGVSL-GGMNL   86 (292)
T ss_pred             cHHHHHHHHHHHHhhHHHHHHHccc-cChhhHHHHHHHHHHHHHHHHhhHH----HhccChhhhHHHHHHHHHH-HHHHH
Confidence            5788888888888888899999996 9999999999999999998885443    3447889999999999998 99999


Q ss_pred             HHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCccccccccccccc
Q 018219           88 VYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLIN  167 (359)
Q Consensus        88 ~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~  167 (359)
                      +||.+++.+|.+.+..+.++.|+.+++++.      -+.++      .+.+.+++.|+.++.. .+...           
T Consensus        87 ~FY~si~riPlGiAVAiEF~GPL~vA~~~s------Rr~~d------~vwvaLAvlGi~lL~p-~~~~~-----------  142 (292)
T COG5006          87 LFYLSIERIPLGIAVAIEFTGPLAVALLSS------RRLRD------FVWVALAVLGIWLLLP-LGQSV-----------  142 (292)
T ss_pred             HHHHHHHhccchhhhhhhhccHHHHHHHhc------cchhh------HHHHHHHHHHHHhhee-ccCCc-----------
Confidence            999999999999999999999999888862      12233      8888899999999872 32221           


Q ss_pred             ccCCCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccc
Q 018219          168 IYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWKLD  247 (359)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (359)
                                   ...+..|..+++.++.||+.|.+..+|..+.. +...-+..-+.+++++.+|+......  ..  ..
T Consensus       143 -------------~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~-~g~~g~a~gm~vAaviv~Pig~~~ag--~~--l~  204 (292)
T COG5006         143 -------------WSLDPVGVALALGAGACWALYIVLGQRAGRAE-HGTAGVAVGMLVAALIVLPIGAAQAG--PA--LF  204 (292)
T ss_pred             -------------CcCCHHHHHHHHHHhHHHHHHHHHcchhcccC-CCchHHHHHHHHHHHHHhhhhhhhcc--hh--hc
Confidence                         13346899999999999999999999998763 44667788889999999999984332  11  12


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeeecc
Q 018219          248 WNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGK  327 (359)
Q Consensus       248 ~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~  327 (359)
                      .+.....-+..+++.+.++|.+-+.++++.+....+.+..+||.++.+.|++++||++|+.||.|++.|+.+..-..+..
T Consensus       205 ~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~  284 (292)
T COG5006         205 SPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTA  284 (292)
T ss_pred             ChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcccccc
Confidence            23356666788899999999999999999999999999999999999999999999999999999999999988666554


Q ss_pred             CCC
Q 018219          328 RKD  330 (359)
Q Consensus       328 ~~~  330 (359)
                      +|+
T Consensus       285 ~~~  287 (292)
T COG5006         285 RKP  287 (292)
T ss_pred             CCC
Confidence            443

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.93  E-value=1.6e-23  Score=190.54  Aligned_cols=286  Identities=24%  Similarity=0.343  Sum_probs=219.9

Q ss_pred             CCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHH
Q 018219            1 MNMKAYIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALL   80 (359)
Q Consensus         1 M~~~~~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   80 (359)
                      |+++...+..+.++..+.|+......|...+...++....+.|...+.+...+..... +...++.. +++....+.+.+
T Consensus         1 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~   78 (292)
T COG0697           1 MKRALLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLE-PRGLRPAL-RPWLLLLLLALL   78 (292)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhh-cccccccc-cchHHHHHHHHH
Confidence            3456677888999999999999999998877436677777779998888844343221 11111111 224456666666


Q ss_pred             HHHHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHH-HhcccccccccccccccchhHHHHHHHHHHHhhhccCccccc
Q 018219           81 GATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAF-LLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKS  159 (359)
Q Consensus        81 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~-l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~  159 (359)
                      ....++.+++.++++++++.++++.++.|+++.++++ ++++||+++++      ++++.+++.|++++...+.....  
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~------~~~~~~~~~Gv~lv~~~~~~~~~--  150 (292)
T COG0697          79 GLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQ------ILGILLALAGVLLILLGGGGGGI--  150 (292)
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHH------HHHHHHHHHhHHheecCCCcchh--
Confidence            6699999999999999999999999999999999997 77799999998      99999999999999732221111  


Q ss_pred             ccccccccccCCCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHH-HHHHHHHHHHHHHHHHhc
Q 018219          160 VVEKPLINIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNT-LICFFASLQTSFLALFFG  238 (359)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  238 (359)
                                            . ...|+.+++.++++++.+.+..|+.. + .++..... +..........+...  .
T Consensus       151 ----------------------~-~~~g~~~~l~a~~~~a~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~--~  203 (292)
T COG0697         151 ----------------------L-SLLGLLLALAAALLWALYTALVKRLS-R-LGPVTLALLLQLLLALLLLLLFFL--S  203 (292)
T ss_pred             ----------------------H-HHHHHHHHHHHHHHHHHHHHHHHHhc-C-CChHHHHHHHHHHHHHHHHHHHHh--c
Confidence                                  1 46899999999999999999999988 4 34455554 333312222222221  1


Q ss_pred             CCCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhh
Q 018219          239 RNPTIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVA  318 (359)
Q Consensus       239 ~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~  318 (359)
                      . ..  .......|..+.+.|++.+++++.++.+++++.++..++.+.+++|+++.+++++++||+++..+++|+.+++.
T Consensus       204 ~-~~--~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~  280 (292)
T COG0697         204 G-FG--APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVL  280 (292)
T ss_pred             c-cc--ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHH
Confidence            1 11  12233478888999988888999999999999999999999999999999999999999999999999999999


Q ss_pred             hhheeeec
Q 018219          319 GLYCVLWG  326 (359)
Q Consensus       319 gv~l~~~~  326 (359)
                      |+.+...+
T Consensus       281 g~~l~~~~  288 (292)
T COG0697         281 GVLLASLR  288 (292)
T ss_pred             HHHHHhcc
Confidence            99998765

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.91  E-value=3.5e-22  Score=172.86  Aligned_cols=283  Identities=14%  Similarity=0.124  Sum_probs=226.7

Q ss_pred             CCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCC-CC--CCCHHHHHHHHHH
Q 018219            1 MNMKAYIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQ-RP--KPSFAVMAKIFVL   77 (359)
Q Consensus         1 M~~~~~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~-~~--~~~~~~~~~~~~~   77 (359)
                      |+++..+|+++.+.+.++||..+...|. ++. .++.++...|..-+..++..+....++.+ ..  .-+++.+....+.
T Consensus         1 ~~~~~~~Gil~~l~Ay~lwG~lp~y~kl-l~~-~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~   78 (293)
T COG2962           1 MAKDSRKGILLALLAYLLWGLLPLYFKL-LEP-LPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALT   78 (293)
T ss_pred             CCCcccchhHHHHHHHHHHHHHHHHHHH-Hcc-CCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHH
Confidence            6667789999999999999999999995 554 99999999999999888777765543321 11  1234666777777


Q ss_pred             HHHHHHHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCccc
Q 018219           78 ALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLF  157 (359)
Q Consensus        78 g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~  157 (359)
                      +.+- ..++..|.+|......-++++=++..|++.++++.+++|||+++.|      +++++++.+|+....+-.|+ .+
T Consensus        79 a~li-~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q------~iAV~lA~~GV~~~~~~~g~-lp  150 (293)
T COG2962          79 ALLI-GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQ------WIAVGLAAAGVLIQTWLLGS-LP  150 (293)
T ss_pred             HHHH-HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHH------HHHHHHHHHHHHHHHHHcCC-Cc
Confidence            7776 9999999999999999999999999999999999999999999999      99999999999998753332 22


Q ss_pred             ccccccccccccCCCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHh
Q 018219          158 KSVVEKPLINIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFF  237 (359)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (359)
                                                     ..++.-++.|+.|....|+.. -  ++.+-....+..-....+...++.
T Consensus       151 -------------------------------wval~la~sf~~Ygl~RK~~~-v--~a~~g~~lE~l~l~p~al~yl~~l  196 (293)
T COG2962         151 -------------------------------WVALALALSFGLYGLLRKKLK-V--DALTGLTLETLLLLPVALIYLLFL  196 (293)
T ss_pred             -------------------------------HHHHHHHHHHHHHHHHHHhcC-C--chHHhHHHHHHHHhHHHHHHHHHH
Confidence                                           356666899999999866543 2  335555555555555555555555


Q ss_pred             cCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHh
Q 018219          238 GRNPTIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIV  317 (359)
Q Consensus       238 ~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~  317 (359)
                      +.........++..+..+...| ..|.++..++..+.|+++-+..+.++|.+|..-.+++.+++||+++..+++..++|.
T Consensus       197 ~~~~~~~~~~~~~~~~LLv~aG-~vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW  275 (293)
T COG2962         197 ADSGQFLQQNANSLWLLLVLAG-LVTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIW  275 (293)
T ss_pred             hcCchhhhcCCchHHHHHHHhh-HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHH
Confidence            4433212223444777888888 557899999999999999999999999999999999999999999999999999999


Q ss_pred             hhhheeeeccC
Q 018219          318 AGLYCVLWGKR  328 (359)
Q Consensus       318 ~gv~l~~~~~~  328 (359)
                      .|+.++..+.-
T Consensus       276 ~aL~l~~~d~l  286 (293)
T COG2962         276 LALALFSIDGL  286 (293)
T ss_pred             HHHHHHHHHHH
Confidence            99999876543

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.90  E-value=4.4e-25  Score=186.77  Aligned_cols=294  Identities=16%  Similarity=0.192  Sum_probs=221.4

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHH
Q 018219            4 KAYIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGAT   83 (359)
Q Consensus         4 ~~~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   83 (359)
                      +..+|.++..++ ..+.++.+.++..++  .+|.+..--|++.-.++..+...+.+....  .+.....+++++|+.| .
T Consensus        35 ~p~~gl~l~~vs-~ff~~~~vv~t~~~e--~~p~e~a~~r~l~~mlit~pcliy~~~~v~--gp~g~R~~LiLRg~mG-~  108 (346)
T KOG4510|consen   35 KPNLGLLLLTVS-YFFNSCMVVSTKVLE--NDPMELASFRLLVRMLITYPCLIYYMQPVI--GPEGKRKWLILRGFMG-F  108 (346)
T ss_pred             CCccCceehhhH-HHHhhHHHhhhhhhc--cChhHhhhhhhhhehhhhheEEEEEeeeee--cCCCcEEEEEeehhhh-h
Confidence            345677788888 455555555554554  899999999987777777666555332221  1223344678899999 8


Q ss_pred             HHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCccccccccc
Q 018219           84 IHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEK  163 (359)
Q Consensus        84 ~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~  163 (359)
                      .+..+.|+|++|.+.++++++...+|.++.++++.++||+.++.+      .++..+.+.|++++.  +.+...      
T Consensus       109 tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~e------aL~s~itl~GVVLIv--RPpFlF------  174 (346)
T KOG4510|consen  109 TGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFE------ALGSLITLLGVVLIV--RPPFLF------  174 (346)
T ss_pred             hHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHH------HHHHHHhhheEEEEe--cCCccc------
Confidence            888899999999999999999999999999999999999999999      999999999999997  333221      


Q ss_pred             ccccccCCCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcc
Q 018219          164 PLINIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTI  243 (359)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (359)
                        ..+.+.+    +.+.......|...++.+.++-|--.++.|++.++. |-.....|..+++.+..+......+  ...
T Consensus       175 --G~~t~g~----~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk~~-h~~msvsyf~~i~lV~s~I~~~~ig--~~~  245 (346)
T KOG4510|consen  175 --GDTTEGE----DSSQVEYDIPGTVAAISSVLFGASVYIILRYIGKNA-HAIMSVSYFSLITLVVSLIGCASIG--AVQ  245 (346)
T ss_pred             --CCCcccc----ccccccccCCchHHHHHhHhhhhhHHHHHHHhhccc-cEEEEehHHHHHHHHHHHHHHhhcc--cee
Confidence              0000000    011234455778889999999888888889998885 4354555666666666655444322  234


Q ss_pred             cccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhhee
Q 018219          244 WKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCV  323 (359)
Q Consensus       244 ~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~  323 (359)
                      ++.... +|+.+..+|++ +++++.+...++|+..+..++++.+++.+++.+++.++|||.|+++.|.|+++++.+.+..
T Consensus       246 lP~cgk-dr~l~~~lGvf-gfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~  323 (346)
T KOG4510|consen  246 LPHCGK-DRWLFVNLGVF-GFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWV  323 (346)
T ss_pred             cCcccc-ceEEEEEehhh-hhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHH
Confidence            444443 88888889954 6899999999999999999999999999999999999999999999999999999988777


Q ss_pred             eeccC
Q 018219          324 LWGKR  328 (359)
Q Consensus       324 ~~~~~  328 (359)
                      ...|.
T Consensus       324 a~~kw  328 (346)
T KOG4510|consen  324 ALKKW  328 (346)
T ss_pred             HHHHH
Confidence            65443

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.88  E-value=9.2e-21  Score=171.99  Aligned_cols=278  Identities=10%  Similarity=0.067  Sum_probs=203.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 018219            8 PYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIHIN   87 (359)
Q Consensus         8 ~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   87 (359)
                      +++++++++++||...+..|...  +.++.++.  |..++.+++..+....+.+ . +..++.+...++.|..- ..++.
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~~--g~~~~~~~--~~~~g~l~~~~~~~~~~~~-~-~~~~~~~~~g~l~G~~w-~ig~~   74 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKIG--GGPYSQTL--GTTFGALILSIAIAIFVLP-E-FWALSIFLVGLLSGAFW-ALGQI   74 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhccC--CCHHHHHH--HHHHHHHHHHHHHHHHhCC-c-ccccHHHHHHHHHHHHH-Hhhhh
Confidence            57889999999999999999754  58887775  7777777776665543221 1 11234444455556655 89999


Q ss_pred             HHHHHhhccCchhhhhhcc-hhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCcccccccccccc
Q 018219           88 VYYIGMDYVSPTVATALGN-VVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLI  166 (359)
Q Consensus        88 ~~~~al~~~~~~~~~~l~~-~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~  166 (359)
                      +++.+.++++.+.+.++.+ +.+++..+++.+++||+.++++  ...-++|++++++|++++...+  ..+      .  
T Consensus        75 ~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~--~~~~~~g~~l~l~G~~l~~~~~--~~~------~--  142 (290)
T TIGR00776        75 NQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQ--TLLGLLALILIIIGVYLTSRSK--DKS------A--  142 (290)
T ss_pred             hHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHH--HHHHHHHHHHHHHhHheEEecc--ccc------c--
Confidence            9999999999999999977 8889999999999999986652  0001788999999988875221  111      0  


Q ss_pred             cccCCCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHH---HHHHHHHHHHHHhcCCCcc
Q 018219          167 NIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICF---FASLQTSFLALFFGRNPTI  243 (359)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~  243 (359)
                           +     .++..+..+|+++++.++++|+.|.+..|+..   .+|.+....+..   .++++..+...   +. .+
T Consensus       143 -----~-----~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~---~~-~~  205 (290)
T TIGR00776       143 -----G-----IKSEFNFKKGILLLLMSTIGYLVYVVVAKAFG---VDGLSVLLPQAIGMVIGGIIFNLGHI---LA-KP  205 (290)
T ss_pred             -----c-----cccccchhhHHHHHHHHHHHHHHHHHHHHHcC---CCcceehhHHHHHHHHHHHHHHHHHh---cc-cc
Confidence                 0     00002346799999999999999999999763   356777444443   33333322221   11 12


Q ss_pred             cccchhhHHHHHHHHHHHHHHHHHHHHHHHHh-ccCcceeeechhhHHHHHHHHHHHHhcCCCcchhh----HhHHHHhh
Q 018219          244 WKLDWNVQFLTVMYCGVLNSALVYYLQTWCIS-VKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSL----IGAFFIVA  318 (359)
Q Consensus       244 ~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~-~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~----~G~~li~~  318 (359)
                      +  .....|..++ .|++ ..+++.+|..+.+ +.+++.++.+...+|+.+.+++++++||..++.|+    +|+++++.
T Consensus       206 ~--~~~~~~~~~~-~Gi~-~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~  281 (290)
T TIGR00776       206 L--KKYAILLNIL-PGLM-WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIII  281 (290)
T ss_pred             h--HHHHHHHHHH-HHHH-HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHH
Confidence            2  2222444444 7877 6999999999999 99999999999999999999999999999999999    99999999


Q ss_pred             hhheeee
Q 018219          319 GLYCVLW  325 (359)
Q Consensus       319 gv~l~~~  325 (359)
                      |+.+...
T Consensus       282 ~~~l~~~  288 (290)
T TIGR00776       282 AANILGI  288 (290)
T ss_pred             HHHHHhc
Confidence            9887654

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.86  E-value=3.7e-19  Score=162.90  Aligned_cols=266  Identities=18%  Similarity=0.207  Sum_probs=210.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCchhhhhhcchhHHHHHHH
Q 018219           36 QLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLL  115 (359)
Q Consensus        36 p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~il  115 (359)
                      |..+++.++....+...+.....+   .++.++..+..++..+++. .++..+.+.|++|+|.+...++.+..|++++++
T Consensus        32 ~~~lt~~q~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~  107 (303)
T PF08449_consen   32 PLFLTFVQFAFNALFSFILLSLFK---FPKSRKIPLKKYAILSFLF-FLASVLSNAALKYISYPTQIVFKSSKPIPVMIL  107 (303)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhcc---ccCCCcChHHHHHHHHHHH-HHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHH
Confidence            889999999998887777655433   1223345566778888888 888899999999999999999999999999999


Q ss_pred             HHHhcccccccccccccccchhHHHHHHHHHHHhhhccCcccccccccccccccCCCcccccccCccchhhhHHHHHHHH
Q 018219          116 AFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLINIYNNNADHLRHHGKENWIKGSALILTSH  195 (359)
Q Consensus       116 a~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~  195 (359)
                      +.+++|+|.++++      ++++++..+|+++....+.....                  .......+...|+++.+.+.
T Consensus       108 ~~l~~~k~y~~~~------~~~v~li~~Gv~~~~~~~~~~~~------------------~~~~~~~~~~~G~~ll~~sl  163 (303)
T PF08449_consen  108 GVLILGKRYSRRQ------YLSVLLITIGVAIFTLSDSSSSS------------------SSNSSSFSSALGIILLLLSL  163 (303)
T ss_pred             HHHhcCccccHHH------HHHHHHHHhhHheeeeccccccc------------------ccccccccchhHHHHHHHHH
Confidence            9999999999999      99999999999999854322211                  00011122334999999999


Q ss_pred             HHHHHHHHHHHHHhhhCC-CchhHHHHHHHHHHHHHHHHHHH--hcCCCccc--ccchhhHHHHHHHHHHHHHHHHHHHH
Q 018219          196 IALSSWLILQAKVFKEYP-APLSMNTLICFFASLQTSFLALF--FGRNPTIW--KLDWNVQFLTVMYCGVLNSALVYYLQ  270 (359)
Q Consensus       196 ~~~a~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~l~~~g~~~~~~~~~l~  270 (359)
                      ++.+.....+++..++++ ++.....+...++.+...+....  .++....+  ....+..+..++... +++.+++...
T Consensus       164 ~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s-~~~~~g~~~i  242 (303)
T PF08449_consen  164 LLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFS-LTGALGQFFI  242 (303)
T ss_pred             HHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHH-HHHHHHHHHH
Confidence            999999999999988654 66789999999998888777776  22211111  112222444444444 5667788888


Q ss_pred             HHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeeeccCCC
Q 018219          271 TWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGKRKD  330 (359)
Q Consensus       271 ~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~~~  330 (359)
                      ....++.++...+.+..++.+++++++.+++++++++.+|+|+++++.|..++.+.++|+
T Consensus       243 ~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~  302 (303)
T PF08449_consen  243 FYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK  302 (303)
T ss_pred             HHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence            889999999999999999999999999999999999999999999999999998776654

; GO: 0055085 transmembrane transport

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.79  E-value=4.3e-18  Score=151.37  Aligned_cols=301  Identities=13%  Similarity=0.197  Sum_probs=222.6

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHhcCC--ChHHHHHHHHHHHHHHHHHHH-------hhhccCCCC----------
Q 018219            4 KAYIPYMAIIFNQFAFAGSNILMKIALERGL--NQLVFVVYRHVIAMLLLGPFA-------YVLERKQRP----------   64 (359)
Q Consensus         4 ~~~~~~~~~l~~~~~~g~~~~~~k~~~~~~~--~p~~~~~~r~~~a~l~l~~~~-------~~~~~~~~~----------   64 (359)
                      +...|+.++++..++|=.+.-+++...+.+-  .|+..++..-..-.+-+.++.       ....|.+..          
T Consensus        11 r~~lGl~lL~~V~viWV~SSeLT~~if~~~~f~kPFfiTY~~ts~fivYL~~~~~~d~~~~~~~~R~~~~~~~~~~e~d~   90 (416)
T KOG2765|consen   11 RWTLGLVLLLLVVVIWVASSELTQSIFEDYNFRKPFFITYLKTSLFIVYLPPFILIDAPWRILETRSKRSNHAIMEEADA   90 (416)
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHhhcccCCceeEeeecccceehhhhhhhhhcchhhhhhhhccccchhhhhhhhh
Confidence            3578999999999999999999999987533  388777665433333333221       111110000          


Q ss_pred             --------------------------------------------------CCCH-----------HHH-HHHHHHHHHHH
Q 018219           65 --------------------------------------------------KPSF-----------AVM-AKIFVLALLGA   82 (359)
Q Consensus        65 --------------------------------------------------~~~~-----------~~~-~~~~~~g~~~~   82 (359)
                                                                        ...+           ++. ...+....+- 
T Consensus        91 e~y~~~~~~~~~~~~~l~~~~~~~~~~~~l~s~~~~~~~s~~~e~~~~~~~~~rs~l~~~~~~t~~~~ak~sl~fc~lW-  169 (416)
T KOG2765|consen   91 EGYFSACTTDKTMESGLSGPESVPDKSPLLGSGEEEKPESTNLEVREKANTKKRSNLKERGKLTATQTAKLSLFFCPLW-  169 (416)
T ss_pred             hccccccccccccccccCCceeeeccccccccccccCCCCccccccccCCcccccchhhhhhhHHHHHHHHHHHHHHHH-
Confidence                                                              0011           133 3344555566 


Q ss_pred             HHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCcccccccc
Q 018219           83 TIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVE  162 (359)
Q Consensus        83 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~  162 (359)
                      +++++.+..|+.+++++..+++.+++.+||..++.++.+||+++..      ++++.+++.|++++...+....+     
T Consensus       170 F~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sK------llav~~si~GViiVt~~~s~~~~-----  238 (416)
T KOG2765|consen  170 FLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSK------LLAVFVSIAGVIIVTMGDSKQNS-----  238 (416)
T ss_pred             HHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHH------HHHHHHhhccEEEEEeccccccc-----
Confidence            8999999999999999999999999999999999999999999997      99999999999999743221111     


Q ss_pred             cccccccCCCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHH---HHHHHHHHHHhcC
Q 018219          163 KPLINIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFA---SLQTSFLALFFGR  239 (359)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~  239 (359)
                                     .........|+++++++++.||+|.++.||-..+.+..+.+.-...++|   .+++.|..++.+.
T Consensus       239 ---------------~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~  303 (416)
T KOG2765|consen  239 ---------------DLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDF  303 (416)
T ss_pred             ---------------cCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence                           1134556799999999999999999999988776433344333333333   4444444443222


Q ss_pred             -CCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhh
Q 018219          240 -NPTIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVA  318 (359)
Q Consensus       240 -~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~  318 (359)
                       .......+...+...+++.+.+.++++-++|.+|.-..++..+.+-+.++...+++.+.++-+..+++.+++|.+.|++
T Consensus       304 ~~~e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv  383 (416)
T KOG2765|consen  304 FGEERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFV  383 (416)
T ss_pred             hccCcccCCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHH
Confidence             1223333444467778888899999999999999999999999999999999999999998899999999999999999


Q ss_pred             hhheeeeccCCCC
Q 018219          319 GLYCVLWGKRKDS  331 (359)
Q Consensus       319 gv~l~~~~~~~~~  331 (359)
                      |.+.++.......
T Consensus       384 ~Fv~vn~~~~~~~  396 (416)
T KOG2765|consen  384 GFVIVNISSENSK  396 (416)
T ss_pred             HHhheeccccccc
Confidence            9999987655443

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.73  E-value=9.3e-18  Score=150.75  Aligned_cols=275  Identities=16%  Similarity=0.161  Sum_probs=217.6

Q ss_pred             HHHHHHHHHHhc-CCC-hHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCc
Q 018219           21 GSNILMKIALER-GLN-QLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIHINVYYIGMDYVSP   98 (359)
Q Consensus        21 ~~~~~~k~~~~~-~~~-p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~   98 (359)
                      ......|+.++. +++ |..++.++...+.+.......++..+..+..++..+...+..|+.. .++..+.+.++++.++
T Consensus        31 ~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~-~~~~v~~n~Sl~~v~V  109 (316)
T KOG1441|consen   31 GVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVF-CISHVLGNVSLSYVPV  109 (316)
T ss_pred             eeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHH-HHHHHhcchhhhccch
Confidence            344566777762 243 8888888888887777777665444433333557788889999988 9999999999999999


Q ss_pred             hhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCcccccccccccccccCCCcccccc
Q 018219           99 TVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLINIYNNNADHLRH  178 (359)
Q Consensus        99 ~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (359)
                      +..+.+..++|++++++++++.+|+.++..      ++.++....|+.+.+..+ .                        
T Consensus       110 sF~q~iKa~~P~~tvl~~~~~~~~~~s~~~------~lsL~piv~GV~ias~~e-~------------------------  158 (316)
T KOG1441|consen  110 SFYQTIKALMPPFTVLLSVLLLGKTYSSMT------YLSLLPIVFGVAIASVTE-L------------------------  158 (316)
T ss_pred             hHHHHHHhhcchhHHHHHHHHhCCCCcceE------EEEEEEeeeeEEEeeecc-c------------------------
Confidence            999999999999999999999999999998      999999999999887411 1                        


Q ss_pred             cCccchhhhHHHHHHHHHHHHHHHHHHHHHhh--hC-CCchhHHHHHHHHHHHHHH-HHHHHhcCCCc---ccccchhhH
Q 018219          179 HGKENWIKGSALILTSHIALSSWLILQAKVFK--EY-PAPLSMNTLICFFASLQTS-FLALFFGRNPT---IWKLDWNVQ  251 (359)
Q Consensus       179 ~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~  251 (359)
                         .-...|.+.+.++.+..+..+++.++..+  +. -++.....++.-++.+.++ |+....+++..   .. ..+...
T Consensus       159 ---~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~-~~~~~~  234 (316)
T KOG1441|consen  159 ---SFNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLT-APWFVT  234 (316)
T ss_pred             ---cccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeec-cccchh
Confidence               12358999999999999999999999984  22 2778999999999988888 87776555332   11 011112


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeeeccCCCC
Q 018219          252 FLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGKRKDS  331 (359)
Q Consensus       252 ~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~~~~  331 (359)
                      ...+.+.. ++....+...+..+.+++|.+.++...+.-++.++.++++|+++.++.+..|+++.++|+.++.+.|.+++
T Consensus       235 ~~~~~~~s-v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~  313 (316)
T KOG1441|consen  235 FLILLLNS-VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEK  313 (316)
T ss_pred             hHHHHHHH-HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhh
Confidence            33333333 44456667778899999999999999999999999999999999999999999999999999988776554


Q ss_pred             c
Q 018219          332 L  332 (359)
Q Consensus       332 ~  332 (359)
                      +
T Consensus       314 ~  314 (316)
T KOG1441|consen  314 K  314 (316)
T ss_pred             c
Confidence            3

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.72  E-value=4.6e-18  Score=143.47  Aligned_cols=285  Identities=14%  Similarity=0.147  Sum_probs=224.1

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHH
Q 018219            4 KAYIPYMAIIFNQFAFAGSNILMKIALERGLN-QLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGA   82 (359)
Q Consensus         4 ~~~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~-p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   82 (359)
                      +.++++.+.-+-+++-..+...+....+.+.+ |...+|+.+..-+++..+...+|+ +    .-...|..+++.++.- 
T Consensus        15 k~li~~~LGQiLSL~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~-~----~~~~~~~hYilla~~D-   88 (336)
T KOG2766|consen   15 KTLIGLGLGQILSLLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRR-K----YIKAKWRHYILLAFVD-   88 (336)
T ss_pred             hhhheeeHHHHHHHHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhh-H----HHHHHHHHhhheeEEe-
Confidence            45667777766777777777777776665554 999999999999999999988743 2    2234455688888888 


Q ss_pred             HHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCcccccccc
Q 018219           83 TIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVE  162 (359)
Q Consensus        83 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~  162 (359)
                      +-++++...|.||++....+++-+...+.+.+++|++++.|.++.+      +.|+++|++|++++.+.+-.. +     
T Consensus        89 VEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmk------i~gV~iCi~GvvmvV~sDV~a-g-----  156 (336)
T KOG2766|consen   89 VEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMK------ISGVVICIVGVVMVVFSDVHA-G-----  156 (336)
T ss_pred             ecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhhe------eeeEEeEecceEEEEEeeecc-c-----
Confidence            8888889999999999999999999999999999999999999998      999999999999998543211 1     


Q ss_pred             cccccccCCCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCc
Q 018219          163 KPLINIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPT  242 (359)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (359)
                                    ...+.++..+|+.+.++++-+||+.++..+.+.++. +...+.....++|+++...-..+..++..
T Consensus       157 --------------d~aggsnp~~GD~lvi~GATlYaVSNv~EEflvkn~-d~~elm~~lgLfGaIIsaIQ~i~~~~~~~  221 (336)
T KOG2766|consen  157 --------------DRAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVKNA-DRVELMGFLGLFGAIISAIQFIFERHHVS  221 (336)
T ss_pred             --------------cccCCCCCccCcEEEEecceeeeeccccHHHHHhcC-cHHHHHHHHHHHHHHHHHHHHhhhcccee
Confidence                          123566778999999999999999999999999984 66788888899999998887543332323


Q ss_pred             ccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhhe
Q 018219          243 IWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYC  322 (359)
Q Consensus       243 ~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l  322 (359)
                      ..++.+  .....+ ...++.++-|.+.-..+|..+++...+-..++-.+++++  ..||-..+|..++..+.+..|.++
T Consensus       222 tl~w~~--~i~~yl-~f~L~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~Glii  296 (336)
T KOG2766|consen  222 TLHWDS--AIFLYL-RFALTMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLII  296 (336)
T ss_pred             eEeehH--HHHHHH-HHHHHHHHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEE
Confidence            332222  111111 134666677777778889999999999999999999998  467777999999999999999999


Q ss_pred             eeec
Q 018219          323 VLWG  326 (359)
Q Consensus       323 ~~~~  326 (359)
                      +..+
T Consensus       297 Ys~r  300 (336)
T KOG2766|consen  297 YSTR  300 (336)
T ss_pred             eecc
Confidence            8433

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.68  E-value=2.7e-16  Score=119.00  Aligned_cols=135  Identities=16%  Similarity=0.234  Sum_probs=121.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCCCC-CCCHHHHHHHHHHHHHHHHHH
Q 018219            7 IPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRP-KPSFAVMAKIFVLALLGATIH   85 (359)
Q Consensus         7 ~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~   85 (359)
                      ...+++++++++||..+++.|..++ ++||...+++|-.+..+.+..+.....+.+.. ..+.|.|..+.+.|+.+ .++
T Consensus         3 ~~~~~ALLsA~fa~L~~iF~KIGl~-~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~-gls   80 (140)
T COG2510           3 AAIIYALLSALFAGLTPIFAKIGLE-GVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAG-GLS   80 (140)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcc-ccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHH-HHH
Confidence            4578999999999999999999999 59999999999999999988887765443222 34789999999999888 999


Q ss_pred             HHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHh
Q 018219           86 INVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFT  149 (359)
Q Consensus        86 ~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~  149 (359)
                      +.+||.|++...++.+.++-.++|+++++++++++|||++.++      ++|+++..+|+++++
T Consensus        81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~------~iG~~LI~~Gailvs  138 (140)
T COG2510          81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPT------WIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHH------HHHHHHHHhCeeeEe
Confidence            9999999999999999999999999999999999999999999      999999999998875

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.68  E-value=8.5e-14  Score=124.41  Aligned_cols=299  Identities=15%  Similarity=0.157  Sum_probs=216.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcC---CChHHHHHHHHHHHHHHHHHHHhhhccC----CCCCC------CHHHHHH
Q 018219            7 IPYMAIIFNQFAFAGSNILMKIALERG---LNQLVFVVYRHVIAMLLLGPFAYVLERK----QRPKP------SFAVMAK   73 (359)
Q Consensus         7 ~~~~~~l~~~~~~g~~~~~~k~~~~~~---~~p~~~~~~r~~~a~l~l~~~~~~~~~~----~~~~~------~~~~~~~   73 (359)
                      .-.+.+++..+.++......|+....+   +.|...+++--.+-.++.....+...|+    ..+.+      .+++..+
T Consensus        15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk   94 (345)
T KOG2234|consen   15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK   94 (345)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence            456778888999999999999987655   6688888888877777776666655322    11111      3456777


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhcc
Q 018219           74 IFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRS  153 (359)
Q Consensus        74 ~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~  153 (359)
                      ..+-+++. .+.+.+++.++.+.+++..++..++..+.|+++.++++++|++++|      |.+.++.++|+.++.....
T Consensus        95 ~~vPa~iY-alqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Q------w~Al~lL~~Gv~~vQ~~~~  167 (345)
T KOG2234|consen   95 VSVPALIY-ALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQ------WMALVLLFAGVALVQLPSL  167 (345)
T ss_pred             HHHHHHHH-HHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHH------HHHHHHHHHHHHHHhccCC
Confidence            77788877 7777899999999999999999999999999999999999999999      9999999999999973222


Q ss_pred             CcccccccccccccccCCCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHH
Q 018219          154 GYLFKSVVEKPLINIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFL  233 (359)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (359)
                      +..+                 .......++...|....+.++++.+...++.++..|+...+..+.-.+...-+++....
T Consensus       168 ~~~~-----------------a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l  230 (345)
T KOG2234|consen  168 SPTG-----------------AKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLL  230 (345)
T ss_pred             CCCC-----------------ccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHH
Confidence            2111                 00122456778999999999999999999999999885554544444443333333333


Q ss_pred             HHHhcC-CCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHh
Q 018219          234 ALFFGR-NPTIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIG  312 (359)
Q Consensus       234 ~~~~~~-~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G  312 (359)
                      ..+..+ +...|...- ..|-...+.-++..+.+=.+....+|+.+-..=.....+..+++.+.++.+++-+||....+|
T Consensus       231 ~~~~~d~~~i~~~gff-~G~s~~vw~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG  309 (345)
T KOG2234|consen  231 TILLQDGEAINEYGFF-YGYSSIVWLVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLG  309 (345)
T ss_pred             HHhhccccccccCCcc-ccccHHHHHHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHH
Confidence            333222 111111110 122233333334444455556666777777777777788999999999999999999999999


Q ss_pred             HHHHhhhhheeeeccCCC
Q 018219          313 AFFIVAGLYCVLWGKRKD  330 (359)
Q Consensus       313 ~~li~~gv~l~~~~~~~~  330 (359)
                      +.+++.++.++...+.++
T Consensus       310 ~~lVi~Si~lY~~~P~~~  327 (345)
T KOG2234|consen  310 ALLVILSIFLYSLYPARD  327 (345)
T ss_pred             HHHHHHHHHHhhcCCccc
Confidence            999999999998555443

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.64  E-value=2.2e-14  Score=126.25  Aligned_cols=230  Identities=19%  Similarity=0.203  Sum_probs=167.9

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHH
Q 018219           67 SFAVMAKIFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSL  146 (359)
Q Consensus        67 ~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~  146 (359)
                      ++++..++.+-+++. .+.+.+.+.++++++++..+++.++..++|++++++++|+|++++|      |+++.+.++|+.
T Consensus        13 ~~~~~~~~~vPA~lY-~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~q------W~aL~lL~~Gv~   85 (244)
T PF04142_consen   13 SPKDTLKLAVPALLY-AIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQ------WLALFLLVAGVV   85 (244)
T ss_pred             hHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhh------HHHHHHHHHHHh
Confidence            467888888888887 9999999999999999999999999999999999999999999999      999999999999


Q ss_pred             HHhhhccCcccccccccccccccCCCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchh-HHHHHHHH
Q 018219          147 LFTLWRSGYLFKSVVEKPLINIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLS-MNTLICFF  225 (359)
Q Consensus       147 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~-~~~~~~~~  225 (359)
                      ++........+           .+++++..+.....+...|.++.++++++.+...++.++..|+.+.+.. ........
T Consensus        86 lv~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~  154 (244)
T PF04142_consen   86 LVQLSSSQSSD-----------NSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLF  154 (244)
T ss_pred             eeecCCccccc-----------cccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHH
Confidence            98632221111           0000011111234556799999999999999999999999998654443 44444555


Q ss_pred             HHHHHHHHHHHhcCCC-cccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCC
Q 018219          226 ASLQTSFLALFFGRNP-TIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAER  304 (359)
Q Consensus       226 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~  304 (359)
                      +.+..++...+.+.+. .+..  .-+.|-...+.-++...++=.+....+|+.+...=+....++.+.+.+.+.++++.+
T Consensus       155 gi~~~~~~~~~~~~~~~~~~g--~f~G~~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~  232 (244)
T PF04142_consen  155 GILFNLLALLLSDGSAISESG--FFHGYSWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFP  232 (244)
T ss_pred             HHHHHHHHHhcccccccccCC--chhhcchHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            5555544433322211 1110  011222223333444555666677788999999999999999999999999999999


Q ss_pred             CcchhhHhHHHH
Q 018219          305 LHLSSLIGAFFI  316 (359)
Q Consensus       305 ~~~~~~~G~~li  316 (359)
                      ++....+|+.++
T Consensus       233 ~s~~f~lg~~~V  244 (244)
T PF04142_consen  233 PSLSFLLGAALV  244 (244)
T ss_pred             CchHHhhheecC
Confidence            999999998753

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.63  E-value=2.2e-14  Score=119.90  Aligned_cols=258  Identities=13%  Similarity=0.105  Sum_probs=196.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCchhhhhhcchhHHHHHHH
Q 018219           36 QLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLL  115 (359)
Q Consensus        36 p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~il  115 (359)
                      ...++|+++....++--++..++.+.   +.++-+-+.+..++.-. .+.....+.|+||.|-....+-.+..|+-++++
T Consensus        53 alaLVf~qC~~N~vfAkvl~~ir~~~---~~D~t~~~~YaAcs~sY-LlAMVssN~Alq~vpYPTqVlgKScKPIPVMil  128 (337)
T KOG1580|consen   53 ALALVFFQCTANTVFAKVLFLIRKKT---EIDNTPTKMYAACSASY-LLAMVSSNQALQYVPYPTQVLGKSCKPIPVMIL  128 (337)
T ss_pred             HHHHHHHHHHHHHHHHHhheeecccc---cccCCcchHHHHHHHHH-HHHHHhccchhcccCCcHHHhcccCCCcceeee
Confidence            45667777777776665554442221   13333344455555544 677777789999999999888899999999999


Q ss_pred             HHHhcccccccccccccccchhHHHHHHHHHHHhhhccCcccccccccccccccCCCcccccccCccchhhhHHHHHHHH
Q 018219          116 AFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLINIYNNNADHLRHHGKENWIKGSALILTSH  195 (359)
Q Consensus       116 a~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~  195 (359)
                      ++++.+++.+|++      ...+.++++|+++...-.+...+                     ........|.++.+++-
T Consensus       129 GVl~~~KsY~w~k------Y~cVL~IV~GValFmYK~~Kv~g---------------------~e~~t~g~GElLL~lSL  181 (337)
T KOG1580|consen  129 GVLFAHKSYHWRK------YCCVLMIVVGVALFMYKENKVGG---------------------AEDKTFGFGELLLILSL  181 (337)
T ss_pred             ehhhhcccccHHH------HHHHHHHHHHHHHhhccccccCC---------------------CcccccchHHHHHHHHH
Confidence            9999999999998      99999999999999842222222                     12234568999999999


Q ss_pred             HHHHHHHHHHHHHhhhCC-CchhHHHHHHHHHHHHHHHHHHHhcCCC--cccccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 018219          196 IALSSWLILQAKVFKEYP-APLSMNTLICFFASLQTSFLALFFGRNP--TIWKLDWNVQFLTVMYCGVLNSALVYYLQTW  272 (359)
Q Consensus       196 ~~~a~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~  272 (359)
                      ..-+.....+.+....+. ....++.++++.+.+.+..-.++.+.-+  ..+....+..|+.+..++ +++.+++.+.+.
T Consensus       182 ~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~a-i~s~LGQ~fIF~  260 (337)
T KOG1580|consen  182 AMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLA-IASCLGQWFIFK  260 (337)
T ss_pred             HhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHH-HHHHhhhHHHHH
Confidence            999988888888776543 3457888999998887776555433211  111112234677778888 678899999999


Q ss_pred             HHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeee
Q 018219          273 CISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLW  325 (359)
Q Consensus       273 a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~  325 (359)
                      .+...+|..-+++..++-+|+++.+.++++++++..||+|.++++.+...=..
T Consensus       261 tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~  313 (337)
T KOG1580|consen  261 TVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVV  313 (337)
T ss_pred             HHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhh
Confidence            99999999999999999999999999999999999999999999999776543

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.60  E-value=7e-13  Score=116.90  Aligned_cols=292  Identities=11%  Similarity=0.095  Sum_probs=221.6

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-hHHHHH--HHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHH
Q 018219            5 AYIPYMAIIFNQFAFAGSNILMKIALERGLN-QLVFVV--YRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLG   81 (359)
Q Consensus         5 ~~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~-p~~~~~--~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   81 (359)
                      ...+...++...+.--...+..|..+.. .+ |..+..  ++.+.+.+.+...-..+. -+.++++++..+..+...++.
T Consensus        10 ~~~~l~sa~~Y~~sS~lm~vvNK~vls~-y~f~~~l~l~~~Q~l~s~~~v~~lk~~~l-v~~~~l~~~~~kk~~P~~~lf   87 (314)
T KOG1444|consen   10 QSSPLLSALFYCLSSILMTVVNKIVLSS-YNFPMGLLLMLLQSLASVLVVLVLKRLGL-VNFRPLDLRTAKKWFPVSLLF   87 (314)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHhc-CCCcHHHHHHHHHHHHHHHHHHHHHHhce-eecCCcChHHHHHHccHHHHH
Confidence            3455666777777777778888988874 43 444444  888777777666543321 334557888888999999988


Q ss_pred             HHHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCccccccc
Q 018219           82 ATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVV  161 (359)
Q Consensus        82 ~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~  161 (359)
                       .+....-..+++|++....+++...+|+++++...+++|.+++++.      +.++....+|.......+. ..     
T Consensus        88 -~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v------~~Sv~~m~~~s~~~~~~d~-sf-----  154 (314)
T KOG1444|consen   88 -VGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKV------WASVFAMIIGSVAAAFTDL-SF-----  154 (314)
T ss_pred             -HHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhH------HHHHHHHHHHHHhhccccc-ee-----
Confidence             8888889999999999999999999999999999999999998887      8888888887777653221 11     


Q ss_pred             ccccccccCCCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCC-CchhHHHHHHHHHHHHHHHHHHHhcC-
Q 018219          162 EKPLINIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYP-APLSMNTLICFFASLQTSFLALFFGR-  239 (359)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-  239 (359)
                                            ...|..+++...++-+.+.+..|+..+... +...+..|..+.+.........+.++ 
T Consensus       155 ----------------------~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~  212 (314)
T KOG1444|consen  155 ----------------------NLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGEL  212 (314)
T ss_pred             ----------------------cchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcch
Confidence                                  235899999999999999999998876422 44678899999988887777766543 


Q ss_pred             C---CcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHH
Q 018219          240 N---PTIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFI  316 (359)
Q Consensus       240 ~---~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li  316 (359)
                      +   .....+.....+..+...+++ +..-.++-.++.+..+++..++++..+...+.+-+.++.+++.++...+|..+-
T Consensus       213 ~~l~~~~~~~~~~~~~~~~~lScv~-gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~  291 (314)
T KOG1444|consen  213 DALSLNFDNWSDSSVLVVMLLSCVM-GFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVG  291 (314)
T ss_pred             HHHHhhcccccchhHHHHHHHHHHH-HHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHH
Confidence            1   111111223346666666655 445555677899999999999999888888888888888999999999999999


Q ss_pred             hhhhheeeeccCCCCccC
Q 018219          317 VAGLYCVLWGKRKDSLAA  334 (359)
Q Consensus       317 ~~gv~l~~~~~~~~~~~~  334 (359)
                      +.|-.++.+.+.++++.+
T Consensus       292 ~~ggv~Y~~~~~~~k~~~  309 (314)
T KOG1444|consen  292 FFGGVLYSYATFRKKKQP  309 (314)
T ss_pred             hhhhhHHhhhhhhhccCC
Confidence            999999988765554443

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.60  E-value=2.7e-14  Score=124.16  Aligned_cols=265  Identities=17%  Similarity=0.192  Sum_probs=211.5

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCchhhhhhcchhHHHHHH
Q 018219           35 NQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFL  114 (359)
Q Consensus        35 ~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~i  114 (359)
                      ++..+++.+-+++.++-....-.  ++.. ....+.|+.+...++.+ .++..+.+.|++|++-....+-.+.-.+-+++
T Consensus        50 ~~~fL~~~q~l~~~~~s~~~l~~--~k~~-~~~~apl~~y~~is~tn-~~s~~~~yeaLKyvSyPtq~LaKscKmIPVml  125 (327)
T KOG1581|consen   50 HSLFLVFCQRLVALLVSYAMLKW--WKKE-LSGVAPLYKYSLISFTN-TLSSWCGYEALKYVSYPTQTLAKSCKMIPVML  125 (327)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhc--cccc-CCCCCchhHHhHHHHHh-hcchHHHHHHHHhccchHHHHHHHhhhhHHHH
Confidence            47788888888887777444333  3222 23457788888899988 99999999999999999999999999999999


Q ss_pred             HHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCcccccccccccccccCCCcccccccCccchhhhHHHHHHH
Q 018219          115 LAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLINIYNNNADHLRHHGKENWIKGSALILTS  194 (359)
Q Consensus       115 la~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a  194 (359)
                      +..++.|+|.+..+      .+...++-.|+.+....+.+. +                  ....++.+...|+.++...
T Consensus       126 mg~Lvy~~ky~~~e------Yl~~~LIs~GvsiF~l~~~s~-s------------------~~~~g~~ns~~G~~Ll~~~  180 (327)
T KOG1581|consen  126 MGTLVYGRKYSSFE------YLVAFLISLGVSIFSLFPNSD-S------------------SSKSGRENSPIGILLLFGY  180 (327)
T ss_pred             HHHHHhcCccCcHH------HHHHHHHHhheeeEEEecCCC-C------------------ccccCCCCchHhHHHHHHH
Confidence            99999999999998      999999999998887543222 1                  1223456778999999999


Q ss_pred             HHHHHHHHHHHHHHhhhCC-CchhHHHHHHHHHHHHHHHHHHHhcCCCcc--cccchhhHHHHHHHHHHHHHHHHHHHHH
Q 018219          195 HIALSSWLILQAKVFKEYP-APLSMNTLICFFASLQTSFLALFFGRNPTI--WKLDWNVQFLTVMYCGVLNSALVYYLQT  271 (359)
Q Consensus       195 ~~~~a~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~g~~~~~~~~~l~~  271 (359)
                      -++-+..+..+.++.+++. ++..++.+.++++.+......+..++....  .-...+..+.-++... .++.+++...+
T Consensus       181 L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s-~~gavGQ~FI~  259 (327)
T KOG1581|consen  181 LLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYS-TCGAVGQLFIF  259 (327)
T ss_pred             HHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHH-Hhhhhhhheeh
Confidence            9999999999999988654 678899999999888877664432221111  1112234566676776 56678999999


Q ss_pred             HHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeeeccCC
Q 018219          272 WCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGKRK  329 (359)
Q Consensus       272 ~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~~  329 (359)
                      +-+++.++...+.++.++-+++++++.+.+|.+++..||.|..+++.|+.+-...+.+
T Consensus       260 ~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~  317 (327)
T KOG1581|consen  260 YTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK  317 (327)
T ss_pred             hhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999999999999999988766555

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.57  E-value=4.1e-13  Score=116.81  Aligned_cols=253  Identities=17%  Similarity=0.220  Sum_probs=187.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhhccCCC---CCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhhccCchhhhhhcchhHHH
Q 018219           36 QLVFVVYRHVIAMLLLGPFAYVLERKQR---PKPSFAVMA-KIFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSF  111 (359)
Q Consensus        36 p~~~~~~r~~~a~l~l~~~~~~~~~~~~---~~~~~~~~~-~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~  111 (359)
                      |..++.++.++-.++-.......+++..   .+.++++.. +....|+.. .....+.+++++|++.+..++..+..++|
T Consensus        45 PLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalat-a~DIGLSN~sl~yVtlSlYTM~KSSsi~F  123 (349)
T KOG1443|consen   45 PLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALAT-ALDIGLSNWSLEYVTLSLYTMTKSSSILF  123 (349)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhh-hcccccccceeeeeeeeeeeeccccHHHH
Confidence            8888888877766665555444333222   245666554 445667666 88888888999999999999999999999


Q ss_pred             HHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCcccccccccccccccCCCcccccccCccchhhhHHHH
Q 018219          112 TFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLINIYNNNADHLRHHGKENWIKGSALI  191 (359)
Q Consensus       112 ~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~  191 (359)
                      +.+++.++.=||.++.-      ..-+.+..+|+++++. +....                           ...|..+.
T Consensus       124 IllFs~if~lEk~~w~L------~l~v~lI~~Glflft~-KsTqf---------------------------~i~Gf~lv  169 (349)
T KOG1443|consen  124 ILLFSLIFKLEKFRWAL------VLIVLLIAVGLFLFTY-KSTQF---------------------------NIEGFFLV  169 (349)
T ss_pred             HHHHHHHHHhHHHHHHH------HHHHHHHhhheeEEEe-cccce---------------------------eehhHHHH
Confidence            99999999999999986      6666667777777763 33322                           35899999


Q ss_pred             HHHHHHHHHHHHHHHHHhhhCC----CchhHHHHHHHHHHHHHHHHHHHhcCCCcc-----cccchh-hHHHHHHHHHHH
Q 018219          192 LTSHIALSSWLILQAKVFKEYP----APLSMNTLICFFASLQTSFLALFFGRNPTI-----WKLDWN-VQFLTVMYCGVL  261 (359)
Q Consensus       192 l~a~~~~a~~~i~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-~~~~~l~~~g~~  261 (359)
                      .++.++.++-..+.+...++.+    +|........-...+.++|..+.+|+....     +...++ ..+..+..++ .
T Consensus       170 ~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~-l  248 (349)
T KOG1443|consen  170 LAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLIS-L  248 (349)
T ss_pred             HHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHH-H
Confidence            9999998888887777776543    788888888888888889988887763211     111111 1233333333 2


Q ss_pred             HHHHHHH---HHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheee
Q 018219          262 NSALVYY---LQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVL  324 (359)
Q Consensus       262 ~~~~~~~---l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~  324 (359)
                      ++..++.   .-+.-..+++....++.+-..-+.+.+++.++.+|+++...|.|..+...|+.+..
T Consensus       249 ~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~  314 (349)
T KOG1443|consen  249 GGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHR  314 (349)
T ss_pred             HHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhc
Confidence            2333333   33345678899999999999999999999999999999999999999999999983

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.56  E-value=2.2e-13  Score=103.38  Aligned_cols=136  Identities=19%  Similarity=0.147  Sum_probs=114.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHHHHHHH
Q 018219          187 GSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWKLDWNVQFLTVMYCGVLNSALV  266 (359)
Q Consensus       187 G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~  266 (359)
                      ..++++++++++++..++.|--.++. ||...+..+.....+....+....++ .......++..|..+.+.| ++++.+
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~~v-dp~~At~IRtiVi~~~l~~v~~~~g~-~~~~~~~~~k~~lflilSG-la~gls   80 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLEGV-DPDFATTIRTIVILIFLLIVLLVTGN-WQAGGEIGPKSWLFLILSG-LAGGLS   80 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccc-CccHHHHHHHHHHHHHHHHHHHhcCc-eecccccCcceehhhhHHH-HHHHHH
Confidence            45899999999999999999888874 77888888888877777666665433 2222123445788888888 778999


Q ss_pred             HHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeee
Q 018219          267 YYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLW  325 (359)
Q Consensus       267 ~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~  325 (359)
                      ..+|++|++..+++++.++.-++|+++.+++++++||++|..+++|+++|++|.++..+
T Consensus        81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            99999999999999999999999999999999999999999999999999999988764

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.54  E-value=3.5e-14  Score=112.34  Aligned_cols=125  Identities=24%  Similarity=0.420  Sum_probs=111.8

Q ss_pred             HHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 018219           17 FAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIHINVYYIGMDYV   96 (359)
Q Consensus        17 ~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~   96 (359)
                      ++||...++.|...++ .||...+++|+..+.+ +.++.....++..++.+++++......+.++...++.+++.+++++
T Consensus         1 ~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~   78 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKK-ISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYI   78 (126)
T ss_pred             ceeeeHHHHHHHHhcc-CCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhc
Confidence            4799999999999986 9999999999999998 6666555555444567788899999999986699999999999999


Q ss_pred             CchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHh
Q 018219           97 SPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFT  149 (359)
Q Consensus        97 ~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~  149 (359)
                      +++.++++.++.|+++.+++++++||++++++      ++|+++++.|++++.
T Consensus        79 ~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~------~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   79 SASIVSILQYLSPVFAAILGWLFLGERPSWRQ------IIGIILIIIGVVLIS  125 (126)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999998      999999999999874

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.40  E-value=6.1e-13  Score=105.20  Aligned_cols=125  Identities=22%  Similarity=0.411  Sum_probs=106.5

Q ss_pred             HHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 018219          196 IALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCIS  275 (359)
Q Consensus       196 ~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~  275 (359)
                      ++||.+.+..|+..++ .+|.....+++..+.+ ..+...+.++..  ....+...+....+.+++++.+++.+++++++
T Consensus         1 ~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~   76 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKK-ISPLSITFWRFLIAGI-LLILLLILGRKP--FKNLSPRQWLWLLFLGLLGTALAYLLYFYALK   76 (126)
T ss_pred             ceeeeHHHHHHHHhcc-CCHHHHHHHHHHHHHH-HHHHHHhhcccc--ccCCChhhhhhhhHhhccceehHHHHHHHHHH
Confidence            4689999999999998 4779999999999987 666666544422  22233447778888888888999999999999


Q ss_pred             ccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheee
Q 018219          276 VKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVL  324 (359)
Q Consensus       276 ~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~  324 (359)
                      +.+++.++.+.+++|+++.++++++++|++++.+++|+++++.|+++..
T Consensus        77 ~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   77 YISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999988753

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.39  E-value=1.7e-12  Score=111.48  Aligned_cols=278  Identities=17%  Similarity=0.173  Sum_probs=194.1

Q ss_pred             HHHHHHHHHHHh---cCC----ChHHHHHHHHHHHHHHHHHHHhhhccCCCCCC-------------CHHHHHHHHHHHH
Q 018219           20 AGSNILMKIALE---RGL----NQLVFVVYRHVIAMLLLGPFAYVLERKQRPKP-------------SFAVMAKIFVLAL   79 (359)
Q Consensus        20 g~~~~~~k~~~~---~~~----~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~-------------~~~~~~~~~~~g~   79 (359)
                      +.+.+..|++-+   .|-    .|+.....-++.-.+++..+..++.|...+..             +.++ ...+.-++
T Consensus        16 s~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p-~lfl~Pal   94 (372)
T KOG3912|consen   16 SFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNP-VLFLPPAL   94 (372)
T ss_pred             cHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCc-ceecChHH
Confidence            456777787532   222    37777777777777777777766654322210             1111 12333556


Q ss_pred             HHHHHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCccccc
Q 018219           80 LGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKS  159 (359)
Q Consensus        80 ~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~  159 (359)
                      +- ..+..+.|.++.+++++..+++.....+|+.+++.-+++++++.++      |+|+....+|++++...+-...+  
T Consensus        95 ~D-i~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~q------Wl~i~fv~lGlviVg~~d~~~~~--  165 (372)
T KOG3912|consen   95 CD-IAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQ------WLGILFVSLGLVIVGSLDVHLVT--  165 (372)
T ss_pred             HH-HhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhh------HHHHHHHHhhhheeeeeeccccc--
Confidence            66 7778888999999999999999999999999999999999999999      99999999999988632211111  


Q ss_pred             ccccccccccCCCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCC-CchhHHHHHHHHHHHHHHHHHHHhc
Q 018219          160 VVEKPLINIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYP-APLSMNTLICFFASLQTSFLALFFG  238 (359)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  238 (359)
                                      ...+...+...|+++.+.+-+.-|+..++.+|..++.. +|.....|...+|.++...+.....
T Consensus       166 ----------------~p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~  229 (372)
T KOG3912|consen  166 ----------------DPYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMY  229 (372)
T ss_pred             ----------------CCccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHh
Confidence                            01112355679999999999999999999998887654 8899999999999655555444321


Q ss_pred             C-----CCcc-----cc---cc----hhhHHHHHHHHHHHHHHHHHH--HHHHHHhccCcceeeechhhHHHHHHHHHHH
Q 018219          239 R-----NPTI-----WK---LD----WNVQFLTVMYCGVLNSALVYY--LQTWCISVKGPVFTAMFIPVQLVIVALFSII  299 (359)
Q Consensus       239 ~-----~~~~-----~~---~~----~~~~~~~l~~~g~~~~~~~~~--l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~  299 (359)
                      .     .+..     +.   ..    ....-..+...|...+ ++++  .=..-.++.++++-.++-.++..+--+++..
T Consensus       230 yi~~~~sfS~~~~g~~eD~~~~~~~~~e~p~l~val~~~~vS-iAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~  308 (372)
T KOG3912|consen  230 YIPSGDSFSCNPRGVLEDWGDAFAALQESPSLAVALIGFTVS-IAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIA  308 (372)
T ss_pred             heecCCcCcCCCCcchhhHHHHHHHhcCCchhHHHHhhhhhh-eeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHH
Confidence            1     1110     10   00    0011223333332222 1211  1123347788999999999999999999999


Q ss_pred             HhcCCCcchhhHhHHHHhhhhheee
Q 018219          300 AFAERLHLSSLIGAFFIVAGLYCVL  324 (359)
Q Consensus       300 ~~~e~~~~~~~~G~~li~~gv~l~~  324 (359)
                      +..|..+..|+.|.++.+.|+++++
T Consensus       309 m~~E~f~llqilGFliLi~Gi~lY~  333 (372)
T KOG3912|consen  309 MGWEYFHLLQILGFLILIMGIILYN  333 (372)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999986

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=99.37  E-value=1.9e-10  Score=101.09  Aligned_cols=222  Identities=16%  Similarity=0.106  Sum_probs=158.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhccCchhhhhh-cchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHH
Q 018219           68 FAVMAKIFVLALLGATIHINVYYIGMDYVSPTVATAL-GNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSL  146 (359)
Q Consensus        68 ~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~  146 (359)
                      .+.+...++.|++- .+++..++.++++...+.+.++ ..++-+.+.++++++++|--+..++  ..=.+++++.++|+.
T Consensus        42 ~~~~~~~~lsG~~W-~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~--~~G~~Al~liiiGv~  118 (269)
T PF06800_consen   42 GTSFIVAFLSGAFW-AIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQK--IIGFLALVLIIIGVI  118 (269)
T ss_pred             HHHHHHHHHHHHHH-HHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchH--HHHHHHHHHHHHHHH
Confidence            47888888899988 9999999999999999999999 6888888999999999998777660  000236667777877


Q ss_pred             HHhhhccCcccccccccccccccCCCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHH
Q 018219          147 LFTLWRSGYLFKSVVEKPLINIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFA  226 (359)
Q Consensus       147 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~  226 (359)
                      +.+..+++...                    .++..+...|....+.+.+.|..|...-|...   .++.....-+. ++
T Consensus       119 lts~~~~~~~~--------------------~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~~---~~~~~~~lPqa-iG  174 (269)
T PF06800_consen  119 LTSYQDKKSDK--------------------SSSKSNMKKGILALLISTIGYWIYSVIPKAFH---VSGWSAFLPQA-IG  174 (269)
T ss_pred             Hhccccccccc--------------------cccccchhhHHHHHHHHHHHHHHHHHHHHhcC---CChhHhHHHHH-HH
Confidence            77632221111                    11245667899999999999999999966632   25565555444 44


Q ss_pred             HHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCc
Q 018219          227 SLQTSFLALFFGRNPTIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLH  306 (359)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~  306 (359)
                      .++.........+.  +.  .....|.. +..| +.-.+++.++..+.++.+.+..=.+..+.++++.+.+.+++||.-+
T Consensus       175 m~i~a~i~~~~~~~--~~--~~k~~~~n-il~G-~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt  248 (269)
T PF06800_consen  175 MLIGAFIFNLFSKK--PF--FEKKSWKN-ILTG-LIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKT  248 (269)
T ss_pred             HHHHHHHHhhcccc--cc--cccchHHh-hHHH-HHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCc
Confidence            43333333222211  11  11113333 2334 3345788899999999999999999999999999999999999987


Q ss_pred             ch----hhHhHHHHhhhhhe
Q 018219          307 LS----SLIGAFFIVAGLYC  322 (359)
Q Consensus       307 ~~----~~~G~~li~~gv~l  322 (359)
                      ..    .++|.++++.|.++
T Consensus       249 ~ke~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  249 KKEMIYTLIGLILIVIGAIL  268 (269)
T ss_pred             hhhHHHHHHHHHHHHHhhhc
Confidence            66    46788888888654

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=99.37  E-value=4.5e-12  Score=108.77  Aligned_cols=265  Identities=13%  Similarity=0.104  Sum_probs=180.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCchhhhhhcchhHHHHHH
Q 018219           36 QLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIHINVYYIGMDY-VSPTVATALGNVVPSFTFL  114 (359)
Q Consensus        36 p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~-~~~~~~~~l~~~~pi~~~i  114 (359)
                      -..++|.++++-+.--+++.--.. ..+++.+.|++......=    +..+.+-++++++ ++...-.++.+-+++.+++
T Consensus        33 gNLITFaqFlFia~eGlif~skf~-~~k~kiplk~Y~i~V~mF----F~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~  107 (330)
T KOG1583|consen   33 GNLITFAQFLFIATEGLIFTSKFF-TVKPKIPLKDYAITVAMF----FIVNVTNNYALKFNIPMPLHIIFRSGSLLANMI  107 (330)
T ss_pred             eeehHHHHHHHHHHhceeeecccc-ccCCCCchhhhheehhee----eeeeeeccceeeecccceEEEEEecCcHHHHHH
Confidence            356778887777666555532111 223556666665544322    4445555699998 6777778889999999999


Q ss_pred             HHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCcccccccccccccccCCCcccccccCccchhhhHHHHHHH
Q 018219          115 LAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLINIYNNNADHLRHHGKENWIKGSALILTS  194 (359)
Q Consensus       115 la~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a  194 (359)
                      +++++.|+|.+.+|      +.++.+..+|+++.++.+.++..         ...++-+++........+..|+.+...+
T Consensus       108 ~g~il~~k~Ys~~Q------y~Sv~~iTiGiiIcTl~s~~d~~---------~~~~~l~~~~~~~~~~~w~iGi~lL~~a  172 (330)
T KOG1583|consen  108 LGWILLGKRYSLRQ------YSSVLMITIGIIICTLFSSKDGR---------SKLSGLDSGSAQSDFFWWLIGIALLVFA  172 (330)
T ss_pred             HHHHhccceeehhh------hhhHHhhhhhheeEEeecCcchh---------hhhcccccCcccccchHHHHHHHHHHHH
Confidence            99999999999999      99999999999999865443322         1111112222223445788999999999


Q ss_pred             HHHHHHHHHHHHHHhhhCC-CchhHHHHHHHHHHHHHHHHHHHhcCCC-cc-----------ccc---chhhHHHHHHHH
Q 018219          195 HIALSSWLILQAKVFKEYP-APLSMNTLICFFASLQTSFLALFFGRNP-TI-----------WKL---DWNVQFLTVMYC  258 (359)
Q Consensus       195 ~~~~a~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----------~~~---~~~~~~~~l~~~  258 (359)
                      .+..|.-.+.++...+++. |+-...+|+-++    .+|..++..++. .+           .+.   .-+..|..++.-
T Consensus       173 l~~sa~mgiyqE~~Y~kyGKh~~EalFytH~L----sLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n  248 (330)
T KOG1583|consen  173 LLLSAYMGIYQETTYQKYGKHWKEALFYTHFL----SLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFN  248 (330)
T ss_pred             HHHHHHHHHHHHHHHHHhcCChHHHHHHHHHh----ccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHHH
Confidence            9999999999998888764 767777777766    455555433211 00           111   112234433332


Q ss_pred             HHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeee
Q 018219          259 GVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLW  325 (359)
Q Consensus       259 g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~  325 (359)
                      . +..-.+.-..+..-.+.++.+++++..++-+++++++.+.|+.+.+++.|+|..++..|.+++.-
T Consensus       249 ~-L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~  314 (330)
T KOG1583|consen  249 V-LTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFAN  314 (330)
T ss_pred             H-HHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence            2 22222222333344567888999999999999999999999999999999999999999888753

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.33  E-value=7.2e-12  Score=104.20  Aligned_cols=262  Identities=13%  Similarity=0.135  Sum_probs=188.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCchhhhhhcchhHHHHHHH
Q 018219           36 QLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLL  115 (359)
Q Consensus        36 p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~il  115 (359)
                      .+.+.+.+.+.+.+.+...-..+.-+    ++..+...++..+++. +...+.-..+++|++....+++.+++.+.++..
T Consensus        37 nflll~vQSlvcvv~l~iLk~l~~~~----fR~t~aK~WfpiSfLL-v~MIyt~SKsLqyL~vpiYTiFKNltII~iAyg  111 (309)
T COG5070          37 NFLLLAVQSLVCVVGLLILKFLRLVE----FRLTKAKKWFPISFLL-VVMIYTSSKSLQYLAVPIYTIFKNLTIILIAYG  111 (309)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhHhh----eehhhhhhhcCHHHHH-HHHHHhcccceeeeeeeHHHHhccceeehhHhh
Confidence            45566777776666665553332212    2223333444455555 555556679999999999999999999999999


Q ss_pred             HHHhcccccccccccccccchhHHHHHHHHHHHhhhccCcccccccccccccccCCCcccccccCccchhhhHHHHHHHH
Q 018219          116 AFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLINIYNNNADHLRHHGKENWIKGSALILTSH  195 (359)
Q Consensus       116 a~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~  195 (359)
                      ..+++|.|++-.+      ....++.+..-+...+.+.+...                     -..+..+.|.+|+...+
T Consensus       112 Evl~Fgg~vtsl~------l~SFilMvlSS~va~w~D~q~~~---------------------~~~~~lN~GY~Wm~~Nc  164 (309)
T COG5070         112 EVLFFGGRVTSLE------LLSFILMVLSSVVATWGDQQASA---------------------FKAQILNPGYLWMFTNC  164 (309)
T ss_pred             HHHHhcCccchhh------HHHHHHHHHHHHHhccchhhHHH---------------------HHhcccCCceEEEehhh
Confidence            9999999999998      88887777666665532221111                     12245668999999999


Q ss_pred             HHHHHHHHHHHHHhhhCC-CchhHHHHHHHHHHHHHHHHHHHhcCC-Cccc-ccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 018219          196 IALSSWLILQAKVFKEYP-APLSMNTLICFFASLQTSFLALFFGRN-PTIW-KLDWNVQFLTVMYCGVLNSALVYYLQTW  272 (359)
Q Consensus       196 ~~~a~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~l~~~g~~~~~~~~~l~~~  272 (359)
                      +..+.+....|+..+--. .....++|..+++..+++.+..+.++. +... ...++..+.++...| ++++..-++-.+
T Consensus       165 lssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISg-l~svgiSy~saW  243 (309)
T COG5070         165 LSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISG-LCSVGISYCSAW  243 (309)
T ss_pred             HhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHH-HHHhhhhhccce
Confidence            999999999887665211 237789999999998888888876541 1111 111222345566666 555566667889


Q ss_pred             HHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeeeccCCC
Q 018219          273 CISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGKRKD  330 (359)
Q Consensus       273 a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~~~  330 (359)
                      +++.++.+..++++.++..-..+.|.++++|+.+...+..+.+-..+..++...+.++
T Consensus       244 cvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k  301 (309)
T COG5070         244 CVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKK  301 (309)
T ss_pred             eEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999988887777776665543

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=99.32  E-value=1e-10  Score=106.02  Aligned_cols=278  Identities=15%  Similarity=0.197  Sum_probs=160.7

Q ss_pred             CCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCCCC-CCCHHH-HHHHHHHH
Q 018219            1 MNMKAYIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRP-KPSFAV-MAKIFVLA   78 (359)
Q Consensus         1 M~~~~~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~-~~~~~~-~~~~~~~g   78 (359)
                      ||.+...|..+++.++++-+....+.|....+ .+                       +...+. +..++. ....++.|
T Consensus         1 ~~~~~~iGv~lav~ss~~~~~g~~lqk~~~~r-~~-----------------------~~~~~~~~~~~~~l~~~~W~~G   56 (300)
T PF05653_consen    1 MNTDFYIGVLLAVVSSIFIAVGFNLQKKSHLR-LP-----------------------RGSLRAGSGGRSYLRRPLWWIG   56 (300)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hh-----------------------cccccccchhhHHHhhHHHHHH
Confidence            78888999999999999999999999987543 10                       000000 000111 12334455


Q ss_pred             HHHHHHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCcccc
Q 018219           79 LLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFK  158 (359)
Q Consensus        79 ~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~  158 (359)
                      .+...++..+.+.|+.+.|++..+++..+.-++.++++..++|||+++++      +.|+.++++|..++....+++.+.
T Consensus        57 ~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~------~~G~~l~i~G~~liv~~~~~~~~~  130 (300)
T PF05653_consen   57 LLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRD------IVGCALIILGSVLIVIFAPKEEPI  130 (300)
T ss_pred             HHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhH------HhhHHHHHhhheeeEEeCCCCCCc
Confidence            55557777888999999999999999999999999999999999999999      999999999999876432221110


Q ss_pred             cccccccccccCCCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHH-------HH
Q 018219          159 SVVEKPLINIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQ-------TS  231 (359)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~  231 (359)
                      ...           ++-.+...+..+.....+  ...++..+.....+|..++  +..........+++.-       ..
T Consensus       131 ~t~-----------~~l~~~~~~~~fl~y~~~--~~~~~~~L~~~~~~r~g~~--~i~vyi~i~sl~Gs~tvl~~K~i~~  195 (300)
T PF05653_consen  131 HTL-----------DELIALLSQPGFLVYFIL--VLVLILILIFFIKPRYGRR--NILVYISICSLIGSFTVLSAKAISI  195 (300)
T ss_pred             CCH-----------HHHHHHhcCcceehhHHH--HHHHHHHHHHhhcchhccc--ceEEEEEEeccccchhhhHHHHHHH
Confidence            000           000000011111111111  1112222222222222221  2221111111222110       00


Q ss_pred             HHHHHhcCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhH-HHHHHHHHHHHhcCCCc--c-
Q 018219          232 FLALFFGRNPTIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQ-LVIVALFSIIAFAERLH--L-  307 (359)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~-pv~a~l~~~~~~~e~~~--~-  307 (359)
                      .+-....+ .+..  ..+..|..++.. +.+........++|+++.+++.+.++.+.. ..++++-+.++++|..+  . 
T Consensus       196 ~i~~~~~g-~~~f--~~~~~y~l~~~~-v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~  271 (300)
T PF05653_consen  196 LIKLTFSG-DNQF--TYPLTYLLLLVL-VVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAW  271 (300)
T ss_pred             HHHHHhcC-chhh--hhhHHHHHHHHH-HHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHH
Confidence            01000111 1111  222345444333 345566667888899999998888777655 45566667778898643  3 


Q ss_pred             ---hhhHhHHHHhhhhheeeecc
Q 018219          308 ---SSLIGAFFIVAGLYCVLWGK  327 (359)
Q Consensus       308 ---~~~~G~~li~~gv~l~~~~~  327 (359)
                         ....|+.+++.|+++....|
T Consensus       272 ~~~~~~~G~~~ii~GV~lL~~~~  294 (300)
T PF05653_consen  272 QIIGFLCGFLIIIIGVFLLSSSK  294 (300)
T ss_pred             HHHHHHHHHHHHHHhhheeeccC
Confidence               34678899999999987543

>PRK13499 rhamnose-proton symporter; Provisional

Probab=99.30  E-value=1.8e-09  Score=98.73  Aligned_cols=302  Identities=13%  Similarity=0.066  Sum_probs=185.3

Q ss_pred             CCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHH--Hhhhcc---CCCCCCCHHHHHHHH
Q 018219            1 MNMKAYIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPF--AYVLER---KQRPKPSFAVMAKIF   75 (359)
Q Consensus         1 M~~~~~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~--~~~~~~---~~~~~~~~~~~~~~~   75 (359)
                      |+++...|+++.+++.++||+.....|. .+. .+-..+ +.-..+-.-++.++  ..+..+   ......+.+.+...+
T Consensus         1 m~~~~~~G~~~~~i~~~~~GS~~~p~K~-~k~-w~wE~~-W~v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~   77 (345)
T PRK13499          1 MSNAIILGIIWHLIGGASSGSFYAPFKK-VKK-WSWETM-WSVGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVF   77 (345)
T ss_pred             CCchhHHHHHHHHHHHHHhhcccccccc-cCC-CchhHH-HHHHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHH
Confidence            7888899999999999999999999997 442 442222 22111111111111  001011   112235677888888


Q ss_pred             HHHHHHHHHHHHHHHHHhhccCchhhhhh-cchhHHHHHHHHHHhccccc---ccccccccccchhHHHHHHHHHHHhhh
Q 018219           76 VLALLGATIHINVYYIGMDYVSPTVATAL-GNVVPSFTFLLAFLLGMEKV---KITSGRGRAKVLGTIICVGGSLLFTLW  151 (359)
Q Consensus        76 ~~g~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ila~l~~~e~~---~~~~~~~~~~~ig~~l~~~Gv~l~~~~  151 (359)
                      +.|++- ..++..++.++++...+.+.++ ..++-++..++..++++|=-   +..+  ...-.+|++++++|+++...-
T Consensus        78 l~G~~W-~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~--g~~~~~gv~liliGi~l~s~A  154 (345)
T PRK13499         78 LFGALW-GIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNG--GRMTLLGVLVALIGVAIVGRA  154 (345)
T ss_pred             HHHHHH-HhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccch--HHHHHHHHHHHHHHHHHHHHh
Confidence            889888 9999999999999999999988 89999999999999998643   2221  112377888889999888742


Q ss_pred             ccCcccccccccccccccCCCcccccccCccchhhhHHHHHHHHHHHHHHH-------HHHHHHhhhCCCchhHHHHHHH
Q 018219          152 RSGYLFKSVVEKPLINIYNNNADHLRHHGKENWIKGSALILTSHIALSSWL-------ILQAKVFKEYPAPLSMNTLICF  224 (359)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~-------i~~~~~~~~~~~~~~~~~~~~~  224 (359)
                      ....+.           ++.    .++.++.+..+|+++++++++.++.|.       ...+.......++......+..
T Consensus       155 g~~k~~-----------~~~----~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~  219 (345)
T PRK13499        155 GQLKER-----------KMG----IKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYV  219 (345)
T ss_pred             hhhccc-----------ccc----cccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHH
Confidence            111111           000    000134567899999999999999999       4443322222244433333333


Q ss_pred             ---HHHHHHHH-HHHH---hcCCCccccc--chhh----HHHHHHHHHHHHHHHHHHHHHHHHhccCcceeee---ch-h
Q 018219          225 ---FASLQTSF-LALF---FGRNPTIWKL--DWNV----QFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAM---FI-P  287 (359)
Q Consensus       225 ---~~~~~~~~-~~~~---~~~~~~~~~~--~~~~----~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~---~~-~  287 (359)
                         .+.++... +..+   .+++......  .+..    .....++.| +.=.+++..+..+.++.+......   +. .
T Consensus       220 ~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G-~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~  298 (345)
T PRK13499        220 VIMGGGAITNLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAG-VMWYLQFFFYAMGHSKLGAQYDFVSWMLHMS  298 (345)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcCCccchHHHHHhcc
Confidence               33333332 2221   1111110111  1111    222223444 333466777777777776554433   33 7


Q ss_pred             hHHHHHHHHHHHHhcCCCc------chhhHhHHHHhhhhheeee
Q 018219          288 VQLVIVALFSIIAFAERLH------LSSLIGAFFIVAGLYCVLW  325 (359)
Q Consensus       288 ~~pv~a~l~~~~~~~e~~~------~~~~~G~~li~~gv~l~~~  325 (359)
                      +..+++.+.+. ++||.=+      ..-++|.+++++|..+...
T Consensus       299 ~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~  341 (345)
T PRK13499        299 FYVLCGNLWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGL  341 (345)
T ss_pred             HHHHHHHHhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhh
Confidence            77899999999 5999876      4568999999999887654

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.28  E-value=1.3e-10  Score=104.18  Aligned_cols=132  Identities=21%  Similarity=0.353  Sum_probs=113.2

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhcCCCh--HHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHH
Q 018219            5 AYIPYMAIIFNQFAFAGSNILMKIALERGLNQ--LVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGA   82 (359)
Q Consensus         5 ~~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p--~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   82 (359)
                      ...|.+++++++++|+...+..|...++ .++  .....+++.++.+++.++.....+.  +..+.+++...+..++++.
T Consensus       126 ~~~G~~~~l~a~~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  202 (260)
T TIGR00950       126 NPAGLLLGLGSGISFALGTVLYKRLVKK-EGPELLQFTGWVLLLGALLLLPFAWFLGPN--PQALSLQWGALLYLGLIGT  202 (260)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhHHhhc-CCchHHHHHHHHHHHHHHHHHHHHHhcCCC--CCcchHHHHHHHHHHHHHH
Confidence            4679999999999999999999998764 664  4555578899988888886653322  2346678888888888887


Q ss_pred             HHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHH
Q 018219           83 TIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGS  145 (359)
Q Consensus        83 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv  145 (359)
                      ..++.++++++++.+++.++.+.++.|+++++++++++||++++.+      ++|+.+.+.|+
T Consensus       203 ~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~------~~G~~li~~g~  259 (260)
T TIGR00950       203 ALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQ------LIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHhc
Confidence            8999999999999999999999999999999999999999999999      99999999886

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=99.25  E-value=2.6e-11  Score=94.24  Aligned_cols=104  Identities=18%  Similarity=0.285  Sum_probs=86.8

Q ss_pred             HHHHHHHHHHHHHHHhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHH
Q 018219           41 VYRHVIAMLLLGPFAYVLERKQ--RPKPSFAVMAKIFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFL  118 (359)
Q Consensus        41 ~~r~~~a~l~l~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l  118 (359)
                      .+|+..+.+++..+...+++.+  .+..+++++......|.++...++.++++|+++.+ +.++++.++.|+++++++++
T Consensus         2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~   80 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL   80 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence            4788888888888877643321  12234466677777888886699999999999999 58889999999999999999


Q ss_pred             hcccccccccccccccchhHHHHHHHHHHHhhh
Q 018219          119 LGMEKVKITSGRGRAKVLGTIICVGGSLLFTLW  151 (359)
Q Consensus       119 ~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~  151 (359)
                      ++|||+++++      +++++++++|++++...
T Consensus        81 ~~~er~~~~~------~~a~~l~~~Gv~li~~~  107 (113)
T PF13536_consen   81 FFKERLSPRR------WLAILLILIGVILIAWS  107 (113)
T ss_pred             HhcCCCCHHH------HHHHHHHHHHHHHHhhh
Confidence            9999999999      99999999999999853

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.21  E-value=3e-11  Score=103.63  Aligned_cols=278  Identities=14%  Similarity=0.107  Sum_probs=192.4

Q ss_pred             HHHHHHHhcC---C-ChHHHHHHHHHHHHHHHHHHHhhhccCC----CC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 018219           24 ILMKIALERG---L-NQLVFVVYRHVIAMLLLGPFAYVLERKQ----RP--KPSFAVMAKIFVLALLGATIHINVYYIGM   93 (359)
Q Consensus        24 ~~~k~~~~~~---~-~p~~~~~~r~~~a~l~l~~~~~~~~~~~----~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~al   93 (359)
                      ...|+.++..   . .|...++.++++...+...+.....+-+    .+  +++.+.........+.. .+...+-++.+
T Consensus        45 f~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVf-i~mI~fnnlcL  123 (347)
T KOG1442|consen   45 FLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVF-ILMISFNNLCL  123 (347)
T ss_pred             hhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhhee-eeehhccceeh
Confidence            3456655420   2 3888999999888777666654432211    11  13334444444444444 44444556999


Q ss_pred             hccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCcccccccccccccccCCCc
Q 018219           94 DYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLINIYNNNA  173 (359)
Q Consensus        94 ~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (359)
                      +|.+++...+=.++..+|++++++.++|+|-+..-      ..++.+.+.|-.+=.  +.+..                 
T Consensus       124 ~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~------~~~C~lIi~GF~lGv--dqE~~-----------------  178 (347)
T KOG1442|consen  124 KYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFA------LGCCLLIILGFGLGV--DQEGS-----------------  178 (347)
T ss_pred             hhcceEEEEeccchhhhHHHHhHHhhccccccccc------ceeehhheehheecc--ccccc-----------------
Confidence            99999999999999999999999999999988876      666655555543332  11111                 


Q ss_pred             ccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCC-CchhHHHHHHHHHHHHHHHHHHHhcCC--Ccccccc-hh
Q 018219          174 DHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYP-APLSMNTLICFFASLQTSFLALFFGRN--PTIWKLD-WN  249 (359)
Q Consensus       174 ~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~  249 (359)
                            ...-...|.+++..|.++-|+..+..|+...... .-...+.|....+.++.+|...+.+.-  ...++.. ..
T Consensus       179 ------~~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~  252 (347)
T KOG1442|consen  179 ------TGTLSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAI  252 (347)
T ss_pred             ------cCccchhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHH
Confidence                  1122358999999999999999999997665432 335788999999999999998875441  1111222 33


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeeeccCC
Q 018219          250 VQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGKRK  329 (359)
Q Consensus       250 ~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~~  329 (359)
                      ..|..+.+.|+++-.++|. -.+=+|.++|.+-.+-....-..-.+++..+++|..+..-|-|-.++++|...+.+-|..
T Consensus       253 ~Fw~~mtLsglfgF~mgyv-Tg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~  331 (347)
T KOG1442|consen  253 KFWILMTLSGLFGFAMGYV-TGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEH  331 (347)
T ss_pred             HHHHHHHHHHHHHHHhhhe-eeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHH
Confidence            3566666666544333332 334567889999999888888999999999999999999999999999999999876655


Q ss_pred             CCccC
Q 018219          330 DSLAA  334 (359)
Q Consensus       330 ~~~~~  334 (359)
                      +.+++
T Consensus       332 em~~~  336 (347)
T KOG1442|consen  332 EMRKA  336 (347)
T ss_pred             HHHhh
Confidence            54443

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.16  E-value=1.8e-09  Score=98.52  Aligned_cols=136  Identities=12%  Similarity=0.078  Sum_probs=112.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHH
Q 018219            6 YIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIH   85 (359)
Q Consensus         6 ~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   85 (359)
                      ..|.++.+.++++|+...+..|...++ .++..... ...++++++.++......  ....+...+...+..|+++..++
T Consensus       147 ~~G~ll~l~aa~~~a~~~v~~r~~~~~-~~~~~~~~-~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~l~lgv~~t~~~  222 (293)
T PRK10532        147 LTGAALALGAGACWAIYILSGQRAGAE-HGPATVAI-GSLIAALIFVPIGALQAG--EALWHWSILPLGLAVAILSTALP  222 (293)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHHH-HHHHHHHHHHHHHHHccC--cccCCHHHHHHHHHHHHHHHHHH
Confidence            468999999999999999999988764 78877654 445666666666554322  12244566666678888888999


Q ss_pred             HHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhh
Q 018219           86 INVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLW  151 (359)
Q Consensus        86 ~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~  151 (359)
                      +.++++++++.+++.++++.++.|+++.++++++++|+++..+      ++|.++.++|++.....
T Consensus       223 ~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~------~iG~~lIl~~~~~~~~~  282 (293)
T PRK10532        223 YSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQ------WLALGAIIAASMGSTLT  282 (293)
T ss_pred             HHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHHHHHhc
Confidence            9999999999999999999999999999999999999999999      99999999999988743

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.13  E-value=1.3e-09  Score=89.56  Aligned_cols=138  Identities=19%  Similarity=0.181  Sum_probs=113.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhh------CCCchhHHHHHHHHHHHHHHHHHHHhcCCCccc-----cc---c-hhhH
Q 018219          187 GSALILTSHIALSSWLILQAKVFKE------YPAPLSMNTLICFFASLQTSFLALFFGRNPTIW-----KL---D-WNVQ  251 (359)
Q Consensus       187 G~~l~l~a~~~~a~~~i~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~---~-~~~~  251 (359)
                      |.++++.+.++.+++.++.|+..++      ..++..+..+....+.+.+.|...+.+......     ..   . .+..
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            6789999999999999999998776      338889999999999999999988866532111     00   0 2234


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeee
Q 018219          252 FLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLW  325 (359)
Q Consensus       252 ~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~  325 (359)
                      +..++..| +.....+...+..+++.+|...++...+..+..++.+++++||+++..+++|+++.++|.+++.|
T Consensus        81 ~~~~~~~~-~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   81 IFLLILSG-LLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHH-HHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            55555555 44567788888999999999999999999999999999999999999999999999999998864

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.10  E-value=4.2e-09  Score=98.13  Aligned_cols=138  Identities=9%  Similarity=0.099  Sum_probs=105.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCh-HHHHHHHHHHHHHHHHHHHhhhccCCC----CCCCHHHHHHHHHHHHH
Q 018219            6 YIPYMAIIFNQFAFAGSNILMKIALERGLNQ-LVFVVYRHVIAMLLLGPFAYVLERKQR----PKPSFAVMAKIFVLALL   80 (359)
Q Consensus         6 ~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p-~~~~~~r~~~a~l~l~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~   80 (359)
                      ..|..+++.++++|+...+..|...+. .++ ...+++...++.+.+.+......+...    ...+.. ....+..++.
T Consensus       188 ~lG~~l~l~aa~~wa~~~il~~~~~~~-~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~i~y~~i~  265 (358)
T PLN00411        188 LIGGALLTIQGIFVSVSFILQAHIMSE-YPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDIT-LITIVTMAII  265 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH-cCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchH-HHHHHHHHHH
Confidence            347889999999999999999987765 654 466677777766666555544332211    112222 2223344554


Q ss_pred             HHHHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhc
Q 018219           81 GATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWR  152 (359)
Q Consensus        81 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~  152 (359)
                      . .+++.++++++++.+++.++++.++.|++++++++++++|++++.+      ++|.++++.|+.++...+
T Consensus       266 t-~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~------~iG~~LIl~Gv~l~~~~~  330 (358)
T PLN00411        266 T-SVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGC------LIGGILITLGFYAVMWGK  330 (358)
T ss_pred             H-HHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHHHHHhhh
Confidence            4 6788899999999999999999999999999999999999999999      999999999999987543

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.09  E-value=3.3e-09  Score=96.75  Aligned_cols=137  Identities=20%  Similarity=0.155  Sum_probs=114.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHH
Q 018219            6 YIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIH   85 (359)
Q Consensus         6 ~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   85 (359)
                      ..|.++.++++++|+......|...+  -++...+.++..++.+.+.++............+...|......++++...+
T Consensus       149 ~~G~l~~l~a~~~~a~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~  226 (292)
T PRK11272        149 PWGAILILIASASWAFGSVWSSRLPL--PVGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIA  226 (292)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcCC--CcchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHH
Confidence            46899999999999999999997543  3455667788888888877776543222111235678888888999887899


Q ss_pred             HHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhh
Q 018219           86 INVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTL  150 (359)
Q Consensus        86 ~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~  150 (359)
                      +.+|++++++.+++.++++.++.|+++++++++++||+++..+      ++|.++.+.|+.+...
T Consensus       227 ~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~------iiG~~lIi~gv~~~~~  285 (292)
T PRK11272        227 ISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIE------WLALGVIVFAVVLVTL  285 (292)
T ss_pred             HHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHH------HHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999      9999999999998863

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.06  E-value=1.7e-09  Score=98.83  Aligned_cols=138  Identities=9%  Similarity=0.084  Sum_probs=109.4

Q ss_pred             chhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccc--cchhhHHHHHHHHHH
Q 018219          183 NWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWK--LDWNVQFLTVMYCGV  260 (359)
Q Consensus       183 ~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~g~  260 (359)
                      +..+|.+++++++++|+...+..|.. .+ -+|.....+++.++.++..+......+ .....  ......+. ....+.
T Consensus         5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~-~~~~~~~~~R~~~a~~~l~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~   80 (296)
T PRK15430          5 QTRQGVLLALAAYFIWGIAPAYFKLI-YY-VPADEILTHRVIWSFFFMVVLMSICRQ-WSYLKTLIQTPQKIF-MLAVSA   80 (296)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHh-cC-CCHHHHHHHHHHHHHHHHHHHHHHHcc-HHHHHHHHcCHHHHH-HHHHHH
Confidence            44689999999999999999999765 44 368999999999998877766543321 11110  01122232 233555


Q ss_pred             HHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheee
Q 018219          261 LNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVL  324 (359)
Q Consensus       261 ~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~  324 (359)
                      +..+..+.++++++++.+++.++.+.++.|++..++++++++|+++..+++|+++.++|+.+..
T Consensus        81 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~  144 (296)
T PRK15430         81 VLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL  144 (296)
T ss_pred             HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence            6677889999999999999999999999999999999999999999999999999999998875

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.05  E-value=1.1e-09  Score=93.91  Aligned_cols=259  Identities=13%  Similarity=0.102  Sum_probs=187.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCchhhhhhcchhHHHHHHH
Q 018219           36 QLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLL  115 (359)
Q Consensus        36 p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~il  115 (359)
                      .+.+++.++++-..+.+.-....+ .+++.   -.|+.+..++.+. .....+..-++.|++-..-.++.++.-+-+++.
T Consensus        75 GWylTlvQf~~Ysg~glie~~~~~-~k~r~---iP~rtY~~la~~t-~gtmGLsn~SlgYLNYPtQviFKccKliPVmig  149 (367)
T KOG1582|consen   75 GWYLTLVQFLVYSGFGLIELQLIQ-TKRRV---IPWRTYVILAFLT-VGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIG  149 (367)
T ss_pred             chHHHHHHHHHHHhhhheEEEeec-cccee---cchhHhhhhHhhh-hhccccCcCccccccCcHHHHHHhhhhhhhhhe
Confidence            356677777666544444433322 22222   3355566677777 777777889999999888888899988889999


Q ss_pred             HHHhcccccccccccccccchhHHHHHHHHHHHhhhccCcccccccccccccccCCCcccccccCccchhhhHHHHHHHH
Q 018219          116 AFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLINIYNNNADHLRHHGKENWIKGSALILTSH  195 (359)
Q Consensus       116 a~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~  195 (359)
                      +.++-+.|..+.+      .++..+..+|+++..+.+.+...                        .-...|+...-.|-
T Consensus       150 gifIqGkRY~v~d------~~aA~lm~lGli~FTLADs~~sP------------------------NF~~~Gv~mIsgAL  199 (367)
T KOG1582|consen  150 GIFIQGKRYGVHD------YIAAMLMSLGLIWFTLADSQTSP------------------------NFNLIGVMMISGAL  199 (367)
T ss_pred             eeeeccccccHHH------HHHHHHHHHHHHhhhhcccccCC------------------------CcceeeHHHHHHHH
Confidence            9999999999998      99999999999999864432211                        22347888777777


Q ss_pred             HHHHHHHHHHHHHhhhCC-CchhHHHHHHHHHHHHHHHHHHHhcCCCcccccc---hhhHHHHHHHHHHHHHHHHHHHHH
Q 018219          196 IALSSWLILQAKVFKEYP-APLSMNTLICFFASLQTSFLALFFGRNPTIWKLD---WNVQFLTVMYCGVLNSALVYYLQT  271 (359)
Q Consensus       196 ~~~a~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~g~~~~~~~~~l~~  271 (359)
                      ++-|.-.-.+++..+..+ +.-.+.+++..++.+.++........-+..|+.-   +........+.+ +.+.++.....
T Consensus       200 l~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s-~~gylG~~~VL  278 (367)
T KOG1582|consen  200 LADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFS-LAGYLGIVFVL  278 (367)
T ss_pred             HHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHH-HHhHhhHHHHH
Confidence            788866666666666544 3356778888888887777666554433444321   112344444444 44566666777


Q ss_pred             HHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeeeccCCC
Q 018219          272 WCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGKRKD  330 (359)
Q Consensus       272 ~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~~~  330 (359)
                      .-++..++..++.+...+--+++++++++|..++|....-|..+++.|+++-.+.++.+
T Consensus       279 alI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~nk  337 (367)
T KOG1582|consen  279 ALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKRNK  337 (367)
T ss_pred             HHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCCCC
Confidence            77888999999999999999999999999999999999999999999999999887433

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=99.02  E-value=1.1e-09  Score=89.56  Aligned_cols=214  Identities=13%  Similarity=0.125  Sum_probs=154.3

Q ss_pred             HHHHHHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCcccc
Q 018219           79 LLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFK  158 (359)
Q Consensus        79 ~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~  158 (359)
                      ++. .+.++.|..|++.++++.++.+..+...|+.+++++++++|+.-.+      +++.++++.|++++...+..    
T Consensus        61 i~W-t~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~k------IlaailAI~GiVmiay~DN~----  129 (290)
T KOG4314|consen   61 IFW-TGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFK------ILAAILAIGGIVMIAYADNE----  129 (290)
T ss_pred             EEE-ecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhh------HHHHHHHhCcEEEEEeccch----
Confidence            344 7788999999999999999999999999999999999999999987      99999999999988732221    


Q ss_pred             cccccccccccCCCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHH----HHHHHHHH
Q 018219          159 SVVEKPLINIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFA----SLQTSFLA  234 (359)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~  234 (359)
                                            ..+...|+.+++.++...++|-+..|+...+. +--...-++..++    .+...|..
T Consensus       130 ----------------------~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnA-n~Gdaa~FmS~LGF~NL~~~~~~~l  186 (290)
T KOG4314|consen  130 ----------------------HADEIIGIACAVGSAFMAALYKVLFKMFIGNA-NFGDAAHFMSCLGFFNLCFISFPAL  186 (290)
T ss_pred             ----------------------hhhhhhhHHHHHHHHHHHHHHHHHHHHHhccC-cchhHHHHHHHHHHHHHHHHhhhHH
Confidence                                  13346899999999999999999999887652 2112222222222    12222222


Q ss_pred             HHhcCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHH
Q 018219          235 LFFGRNPTIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAF  314 (359)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~  314 (359)
                      .........|.......|..+...+.+ +..-+.+.+.++..+.|...++-+.+...--...+.++-+-..+...+.|..
T Consensus       187 IL~~T~VE~~qsFA~~PWG~l~G~A~L-~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~  265 (290)
T KOG4314|consen  187 ILAFTGVEHLQSFAAAPWGCLCGAAGL-SLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATC  265 (290)
T ss_pred             HHHHhchHHHHHHhhCCchhhhhHHHH-HHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHH
Confidence            221112233432233467777666644 3345566778888889988888888888888888875444456788899999


Q ss_pred             HHhhhhheeeecc
Q 018219          315 FIVAGLYCVLWGK  327 (359)
Q Consensus       315 li~~gv~l~~~~~  327 (359)
                      +|+.|.++.....
T Consensus       266 iI~i~FiLiiiP~  278 (290)
T KOG4314|consen  266 IICIGFILIIIPE  278 (290)
T ss_pred             HHHHhHHheeccc
Confidence            9999998887554

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.02  E-value=4.9e-09  Score=95.11  Aligned_cols=133  Identities=11%  Similarity=0.148  Sum_probs=102.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHHHHHHHH
Q 018219          188 SALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWKLDWNVQFLTVMYCGVLNSALVY  267 (359)
Q Consensus       188 ~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~  267 (359)
                      .++.+.++++++...+..|+..++ +++  ...+.+..+.++..|....... ...++.... .+......+.+.....+
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~-~~~--~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~   77 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADK-EPD--FLWWALLAHSVLLTPYGLWYLA-QVGWSRLPA-TFWLLLAISAVANMVYF   77 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCc-hhH--HHHHHHHHHHHHHHHHHHHhcc-cCCCCCcch-hhHHHHHHHHHHHHHHH
Confidence            468899999999999999988776 333  3456666666666666654211 123332233 33334444546677889


Q ss_pred             HHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeee
Q 018219          268 YLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLW  325 (359)
Q Consensus       268 ~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~  325 (359)
                      .++.+++++.+++.++++.+++|+++.+++++++||+++.++++|+.+++.|+.+...
T Consensus        78 ~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~  135 (281)
T TIGR03340        78 LGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL  135 (281)
T ss_pred             HHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence            9999999999999999999999999999999999999999999999999999988764

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.01  E-value=8.7e-09  Score=94.10  Aligned_cols=133  Identities=17%  Similarity=0.162  Sum_probs=104.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHH
Q 018219            6 YIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIH   85 (359)
Q Consensus         6 ~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   85 (359)
                      ..|.++++.++++|+...+..|...++ .++....+   ....+.+.+.... ........+...|...+..++.. .++
T Consensus       155 ~~G~~~~l~aa~~~A~~~v~~k~~~~~-~~~~~~~~---~~~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~~~~t-~~~  228 (295)
T PRK11689        155 PLSYGLAFIGAFIWAAYCNVTRKYARG-KNGITLFF---ILTALALWIKYFL-SPQPAMVFSLPAIIKLLLAAAAM-GFG  228 (295)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhccCC-CCchhHHH---HHHHHHHHHHHHH-hcCccccCCHHHHHHHHHHHHHH-HHH
Confidence            458899999999999999999987653 77765432   2233333332222 22212235667777777777554 889


Q ss_pred             HHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhh
Q 018219           86 INVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTL  150 (359)
Q Consensus        86 ~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~  150 (359)
                      +.++++++++.+++.++.+.++.|++.+++++++++|+++..+      ++|+++++.|+.+...
T Consensus       229 ~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~------~iG~~lI~~gv~~~~~  287 (295)
T PRK11689        229 YAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSF------WQGVAMVTAGSLLCWL  287 (295)
T ss_pred             HHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHhHHHHhh
Confidence            9999999999999999999999999999999999999999999      9999999999988863

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=99.00  E-value=1.6e-09  Score=95.72  Aligned_cols=280  Identities=15%  Similarity=0.153  Sum_probs=168.5

Q ss_pred             CCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHH
Q 018219            1 MNMKAYIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALL   80 (359)
Q Consensus         1 M~~~~~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   80 (359)
                      |+.+...|.++++.+.++.|.+..+.|....+ ...   ..               .+......+. .++  +.+..|.+
T Consensus        15 ~~~d~~~G~~LaissS~~Ig~sfilkKkgl~r-~~~---~~---------------~ra~~gg~~y-l~~--~~Ww~G~l   72 (335)
T KOG2922|consen   15 MSSDNIIGLVLAISSSIFIGSSFILKKKGLKR-AGA---SG---------------LRAGEGGYGY-LKE--PLWWAGML   72 (335)
T ss_pred             hccCceeeeeehhhccEEEeeehhhhHHHHHH-Hhh---hc---------------ccccCCCcch-hhh--HHHHHHHH
Confidence            56678899999999999999999999988764 110   00               1111111111 122  44567777


Q ss_pred             HHHHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCcccccc
Q 018219           81 GATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSV  160 (359)
Q Consensus        81 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~  160 (359)
                      .+.++...-|.|+.+.|++..+++.+++-++.++++..+++|++++..      .+|+.++++|-.++.. ..+..+ +.
T Consensus        73 tm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g------~lGc~l~v~Gst~iV~-haP~e~-~i  144 (335)
T KOG2922|consen   73 TMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLG------ILGCVLCVVGSTTIVI-HAPKEQ-EI  144 (335)
T ss_pred             HHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhh------hhheeEEecccEEEEE-ecCccc-cc
Confidence            778888888999999999999999999999999999999999999999      9999999999998874 222221 00


Q ss_pred             cccccccccCCCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHH-----HHHHHH
Q 018219          161 VEKPLINIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQ-----TSFLAL  235 (359)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~  235 (359)
                      ++ .        .+-.+...+..+..-..+.+. .++  +-....+. .....+++.......+.|++-     .+-.++
T Consensus       145 ~t-~--------~el~~~~~~~~Fliy~~~iil-~~~--il~~~~~p-~~g~tnilvyi~i~s~iGS~tV~svKalg~ai  211 (335)
T KOG2922|consen  145 ES-V--------EEVWELATEPGFLVYVIIIIL-IVL--ILIFFYAP-RYGQTNILVYIGICSLIGSLTVMSVKALGIAI  211 (335)
T ss_pred             cc-H--------HHHHHHhcCccHHHHHHHHHH-HHH--HHheeecc-cccccceeehhhHhhhhcceeeeeHHHHHHHH
Confidence            00 0        000000011111111111111 111  11111111 111124444444444444111     111111


Q ss_pred             --HhcCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhh-HHHHHHHHHHHHhcCCCcc-----
Q 018219          236 --FFGRNPTIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPV-QLVIVALFSIIAFAERLHL-----  307 (359)
Q Consensus       236 --~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~-~pv~a~l~~~~~~~e~~~~-----  307 (359)
                        -..+ ..+.  ..+..|..++... .+......-.++|++..+++.++++.+. -..++++-+.++|+|.-..     
T Consensus       212 klt~~g-~~ql--~~~~ty~~~l~~~-~~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i  287 (335)
T KOG2922|consen  212 KLTFSG-NNQL--FYPLTWIFLLVVA-TCVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDI  287 (335)
T ss_pred             HHHhcC-Cccc--ccHHHHHHHHHHH-HHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHH
Confidence              1111 1122  2223566555554 4445566677889999988887776654 5677888888999986532     


Q ss_pred             -hhhHhHHHHhhhhheeeecc
Q 018219          308 -SSLIGAFFIVAGLYCVLWGK  327 (359)
Q Consensus       308 -~~~~G~~li~~gv~l~~~~~  327 (359)
                       ....|+..++.|+++....|
T Consensus       288 ~~~~~Gf~ti~~G~flL~~~k  308 (335)
T KOG2922|consen  288 AGELCGFVTIFLGIFLLHRTK  308 (335)
T ss_pred             HHHHHhHHHhhheeeEeeeec
Confidence             35789999999999986443

>TIGR00688 rarD rarD protein

Probab=98.98  E-value=5.1e-09  Score=93.63  Aligned_cols=136  Identities=12%  Similarity=0.180  Sum_probs=107.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCC---cccccc-hhhHHHHHHHHHHH
Q 018219          186 KGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNP---TIWKLD-WNVQFLTVMYCGVL  261 (359)
Q Consensus       186 ~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~l~~~g~~  261 (359)
                      +|..+.++++++|+...+..|.. .+ -+|.++.+++++++.+++.+......+..   ...+.. ....+..+...|++
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~~-~~-~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   79 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKLL-KP-LPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL   79 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHh-cc-CCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence            48899999999999999999984 44 47899999999999887776654432210   011111 11123445555543


Q ss_pred             HHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheee
Q 018219          262 NSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVL  324 (359)
Q Consensus       262 ~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~  324 (359)
                       ....+.++++++++.+++.++.+.++.|+++.+++.++++|+++..+++|..+.++|+.+..
T Consensus        80 -~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~  141 (256)
T TIGR00688        80 -IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI  141 (256)
T ss_pred             -HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence             67889999999999999999999999999999999999999999999999999999988764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>TIGR00803 nst UDP-galactose transporter

Probab=98.93  E-value=5.2e-09  Score=91.52  Aligned_cols=216  Identities=13%  Similarity=0.098  Sum_probs=130.1

Q ss_pred             CchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCccccc--ccccccccccCCCcc
Q 018219           97 SPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKS--VVEKPLINIYNNNAD  174 (359)
Q Consensus        97 ~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~  174 (359)
                      +........+..++++++..+...++|.+..+      +++.++...|+......+.+.....  ..... ..+.+...+
T Consensus         3 svPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~------i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~-~~~~~~~~~   75 (222)
T TIGR00803         3 SVPIHIIFKQNNLVLIALGNLLAAGKQVTQLK------ILSTALMTLGSLVASLGDDQWFSLKLLKLGVA-IVQMVQSSA   75 (222)
T ss_pred             cccchHHHHhcchHHHHHhcccccceeeehHH------HHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHe-eeecCCCCc
Confidence            34455667888899999999999999988776      9999999888876543322110000  00000 000000000


Q ss_pred             cccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHhcC-CC-cccccchhhHH
Q 018219          175 HLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGR-NP-TIWKLDWNVQF  252 (359)
Q Consensus       175 ~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~  252 (359)
                        ......+...|....+.+.++.+...++.++..++.+............-.++.......... +. ..+...  ..+
T Consensus        76 --~~~~~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~  151 (222)
T TIGR00803        76 --KTLMFGNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFF--IGY  151 (222)
T ss_pred             --cccccccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcc--cCC
Confidence              001123556788888888888888888888877664322222122221111111111111111 10 011100  001


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhhee
Q 018219          253 LTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCV  323 (359)
Q Consensus       253 ~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~  323 (359)
                      ....+.-++...++..+..+.+++.++...+....++++++.+++.+++||+++..++.|+.+++.|+.++
T Consensus       152 ~~~~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       152 PTAVWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             chHHHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence            11111222445667778899999999999999999999999999999999999999999999999998764

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.89  E-value=6.7e-08  Score=88.45  Aligned_cols=138  Identities=16%  Similarity=0.251  Sum_probs=107.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCh---HHHHHHHHHHHHHHHHHHHhhhccCC-----CCCCCHHHHHHHHHH
Q 018219            6 YIPYMAIIFNQFAFAGSNILMKIALERGLNQ---LVFVVYRHVIAMLLLGPFAYVLERKQ-----RPKPSFAVMAKIFVL   77 (359)
Q Consensus         6 ~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p---~~~~~~r~~~a~l~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~   77 (359)
                      ..|.+++++++++|+...+..|...+. .++   ....++...++.+.+........+..     ....+...|...+..
T Consensus       142 ~~G~~l~l~aal~~a~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  220 (299)
T PRK11453        142 MLGFMLTLAAAFSWACGNIFNKKIMSH-STRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYL  220 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcc-cCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHH
Confidence            468999999999999999999987553 332   23334444444333333322222211     123567888889999


Q ss_pred             HHHHHHHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhh
Q 018219           78 ALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTL  150 (359)
Q Consensus        78 g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~  150 (359)
                      |++...+.+.+++.++++.++..++.+..+.|++..++++++++|+++..+      ++|.++.++|+.+...
T Consensus       221 ~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~------~iG~~lI~~gv~l~~~  287 (299)
T PRK11453        221 AFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQ------FLGAVLIMAGLYINVF  287 (299)
T ss_pred             HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHH------HHHHHHHHHHHHHHhc
Confidence            999889999999999999999999999999999999999999999999999      9999999999988763

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.84  E-value=6.2e-08  Score=76.46  Aligned_cols=122  Identities=17%  Similarity=0.146  Sum_probs=92.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHHHHHH
Q 018219          186 KGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWKLDWNVQFLTVMYCGVLNSAL  265 (359)
Q Consensus       186 ~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~  265 (359)
                      .|.++.+.+.++.+...++.|+-.++.++ ...... .    . ......           .+  . ...++.|+++.++
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~-~~~~~~-~----~-~~~~~~-----------~~--p-~~~i~lgl~~~~l   60 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLPL-LSHAWD-F----I-AALLAF-----------GL--A-LRAVLLGLAGYAL   60 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCC-ccchhH-H----H-HHHHHH-----------hc--c-HHHHHHHHHHHHH
Confidence            47789999999999999999988877432 221111 0    0 000011           00  1 1245778888999


Q ss_pred             HHHHHHHHHhccCcceeeechhhHHHHHHHHHHH--HhcCCCcchhhHhHHHHhhhhheeeeccC
Q 018219          266 VYYLQTWCISVKGPVFTAMFIPVQLVIVALFSII--AFAERLHLSSLIGAFFIVAGLYCVLWGKR  328 (359)
Q Consensus       266 ~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~--~~~e~~~~~~~~G~~li~~gv~l~~~~~~  328 (359)
                      ++.+|.+++++.+.+.+.++....++...+.++.  ++||++|+.+++|+++|++|+++..+.++
T Consensus        61 a~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~  125 (129)
T PRK02971         61 SMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTT  125 (129)
T ss_pred             HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence            9999999999999999999999998888888875  79999999999999999999999875443

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.81  E-value=4e-08  Score=90.07  Aligned_cols=139  Identities=19%  Similarity=0.293  Sum_probs=107.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHhhhccCCCCC---------CCH-HHHHHH
Q 018219            6 YIPYMAIIFNQFAFAGSNILMKIALER-GLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPK---------PSF-AVMAKI   74 (359)
Q Consensus         6 ~~~~~~~l~~~~~~g~~~~~~k~~~~~-~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~---------~~~-~~~~~~   74 (359)
                      ..|.+++++++++|+...+..|...+. +.+|...+++....+.+.+.|+...........         ... ..+...
T Consensus       144 ~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (302)
T TIGR00817       144 WAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVS  223 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHH
Confidence            569999999999999999999987651 389999999999999998888876533211000         000 111112


Q ss_pred             HHHHHHHHHHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhh
Q 018219           75 FVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTL  150 (359)
Q Consensus        75 ~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~  150 (359)
                      +..+.......+.+++.+++++++..+++...+.|++++++++++++|+++..+      ++|.++++.|+.+...
T Consensus       224 ~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~------~~G~~lil~Gv~l~~~  293 (302)
T TIGR00817       224 LVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQ------VFGTGIAIAGVFLYSR  293 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhH------HHHHHHHHHHHHHHHH
Confidence            233332324445677789999999999999999999999999999999999999      9999999999998863

specificities overlap.

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.80  E-value=1.8e-08  Score=78.14  Aligned_cols=107  Identities=21%  Similarity=0.377  Sum_probs=81.1

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHH
Q 018219          221 LICFFASLQTSFLALFFGRNPTIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIA  300 (359)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~  300 (359)
                      ++...+.+..........+.....+......+......|++....++.++.++.++.+ ..++.+..++|+++.+++.++
T Consensus         3 ~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~   81 (113)
T PF13536_consen    3 FRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLF   81 (113)
T ss_pred             HHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHH
Confidence            4555666666655554333212222222235566667676666689999999999999 588899999999999999999


Q ss_pred             hcCCCcchhhHhHHHHhhhhheeeeccC
Q 018219          301 FAERLHLSSLIGAFFIVAGLYCVLWGKR  328 (359)
Q Consensus       301 ~~e~~~~~~~~G~~li~~gv~l~~~~~~  328 (359)
                      ++|+++..+++|++++++|+.+..+.+.
T Consensus        82 ~~er~~~~~~~a~~l~~~Gv~li~~~~~  109 (113)
T PF13536_consen   82 FKERLSPRRWLAILLILIGVILIAWSDL  109 (113)
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence            9999999999999999999999876544

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=98.75  E-value=2.5e-09  Score=90.70  Aligned_cols=275  Identities=15%  Similarity=0.149  Sum_probs=182.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 018219            7 IPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIHI   86 (359)
Q Consensus         7 ~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   86 (359)
                      ..++.+++-++.||+.+...-..   |=.|.+.+.-.-+-+.++-..+++.    ..|.++.+.+...++.|.+- ..++
T Consensus         2 ~~~liaL~P~l~WGsip~v~~k~---GG~p~qQ~lGtT~GALifaiiv~~~----~~p~~T~~~~iv~~isG~~W-s~GQ   73 (288)
T COG4975           2 MDLLIALLPALGWGSIPLVANKF---GGKPYQQTLGTTLGALIFAIIVFLF----VSPELTLTIFIVGFISGAFW-SFGQ   73 (288)
T ss_pred             hhHHHHHHHHHHhcccceeeeec---CCChhHhhhhccHHHHHHHHHHhee----ecCccchhhHHHHHHhhhHh-hhhh
Confidence            45788999999999988765432   4566666554444444433333333    22336678888888888888 9999


Q ss_pred             HHHHHHhhccCchhhhhh-cchhHHHHHHHHHHhcccccccccccccccchh---HHHHHHHHHHHhhhccCcccccccc
Q 018219           87 NVYYIGMDYVSPTVATAL-GNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLG---TIICVGGSLLFTLWRSGYLFKSVVE  162 (359)
Q Consensus        87 ~~~~~al~~~~~~~~~~l-~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig---~~l~~~Gv~l~~~~~~~~~~~~~~~  162 (359)
                      ..++.|.++...+.+.++ ..++-+-+.+++++.+||--+..+     .++|   +++.++|+.+-+. ++.        
T Consensus        74 ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~-----~IlG~iAliliviG~~lTs~-~~~--------  139 (288)
T COG4975          74 ANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQ-----IILGFIALILIVIGIYLTSK-QDR--------  139 (288)
T ss_pred             hhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchh-----HHHHHHHHHHHHHhheEeee-ecc--------
Confidence            999999999999999999 778888899999999999877765     2222   2233333333321 110        


Q ss_pred             cccccccCCCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCc
Q 018219          163 KPLINIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPT  242 (359)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (359)
                             +    +.+.++.++...|....+.+.+.|-.|.+..+...-+   .++.. .-...+.++.....-..+.   
T Consensus       140 -------~----nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~v~---g~sai-LPqAiGMv~~ali~~~~~~---  201 (288)
T COG4975         140 -------N----NKEEENPSNLKKGIVILLISTLGYVGYVVLFQLFDVD---GLSAI-LPQAIGMVIGALILGFFKM---  201 (288)
T ss_pred             -------c----cccccChHhhhhheeeeeeeccceeeeEeeecccccc---chhhh-hHHHHHHHHHHHHHhhccc---
Confidence                   0    0112245667889999999999999999987766532   22222 2233333333322222221   


Q ss_pred             ccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchh----hHhHHHHhh
Q 018219          243 IWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSS----LIGAFFIVA  318 (359)
Q Consensus       243 ~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~----~~G~~li~~  318 (359)
                       -+......|..+ ..|++ =.+++..+..+.++.+..+.=.+..+..+++.+-+.++++|+-|..+    ++|++++++
T Consensus       202 -~~~~~K~t~~ni-i~G~~-Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivv  278 (288)
T COG4975         202 -EKRFNKYTWLNI-IPGLI-WAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVV  278 (288)
T ss_pred             -ccchHHHHHHHH-hhHHH-HHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHH
Confidence             111222233333 33433 35788888889999999988888999999999999999999988765    678888888


Q ss_pred             hhheee
Q 018219          319 GLYCVL  324 (359)
Q Consensus       319 gv~l~~  324 (359)
                      |..+..
T Consensus       279 gai~lg  284 (288)
T COG4975         279 GAILLG  284 (288)
T ss_pred             Hhhhhh
Confidence            876654

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.74  E-value=3.7e-07  Score=74.76  Aligned_cols=133  Identities=23%  Similarity=0.351  Sum_probs=113.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc------CCChHHHHHHHHHHHHHHHHHHHhhhccCCCCC----C-------CHHH
Q 018219            8 PYMAIIFNQFAFAGSNILMKIALER------GLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPK----P-------SFAV   70 (359)
Q Consensus         8 ~~~~~l~~~~~~g~~~~~~k~~~~~------~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~----~-------~~~~   70 (359)
                      |.++++.+.++.+...+..|...+.      +.++..+..+....+.+.+.+.....+..+..+    .       +.+.
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            5788999999999999999998765      589999999999999999999877765533110    0       2244


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHH
Q 018219           71 MAKIFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLL  147 (359)
Q Consensus        71 ~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l  147 (359)
                      +..++..|++. ...+...+..++++++...++......+.+.++++++++|+++..+      ++|++++++|+.+
T Consensus        81 ~~~~~~~~~~~-~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~------~~G~~l~~~G~~~  150 (153)
T PF03151_consen   81 IFLLILSGLLA-FLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQ------IIGIVLALVGVLL  150 (153)
T ss_pred             HHHHHHHHHHH-HHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHH------HHHHHHHHHHHhe
Confidence            55566667777 8999999999999999999999999999999999999999999999      9999999999875

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.69  E-value=5.4e-07  Score=84.21  Aligned_cols=138  Identities=18%  Similarity=0.154  Sum_probs=104.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHHHHHH
Q 018219          186 KGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWKLDWNVQFLTVMYCGVLNSAL  265 (359)
Q Consensus       186 ~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~  265 (359)
                      .-..+.+.=-.+...+++..|...+..+.|..++.+++.++.+..........+...... ....+|..++.+|++. ..
T Consensus        49 ~~~~~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~llp~gl~~-~~  126 (350)
T PTZ00343         49 KLALLFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIK-SLKLFLKNFLPQGLCH-LF  126 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC-CHHHHHHHHHHHHHHH-HH
Confidence            334444444555566788889888887558999999999997765544332111111111 1233677788888554 44


Q ss_pred             HHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeee
Q 018219          266 VYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLW  325 (359)
Q Consensus       266 ~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~  325 (359)
                      .+...+.++++.+++.++++..++|+++++++.++++|+++..++.|.+++++|+.+...
T Consensus       127 ~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~  186 (350)
T PTZ00343        127 VHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASV  186 (350)
T ss_pred             HHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheec
Confidence            577777999999999999999999999999999999999999999999999999998864

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.64  E-value=6.6e-07  Score=68.86  Aligned_cols=70  Identities=19%  Similarity=0.188  Sum_probs=63.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHh
Q 018219           74 IFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFT  149 (359)
Q Consensus        74 ~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~  149 (359)
                      ....+.+++.++..++..+++..|.+.+..+.++.++++++++++++|||+++++      ++|+.++++|++++.
T Consensus        39 ~~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~------~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         39 WLGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRH------WCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHHh
Confidence            3344556778899999999999999999999889999999999999999999999      999999999999885

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.61  E-value=7.9e-07  Score=80.91  Aligned_cols=128  Identities=12%  Similarity=0.119  Sum_probs=103.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH----HHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHH
Q 018219            6 YIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHV----IAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLG   81 (359)
Q Consensus         6 ~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~----~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   81 (359)
                      .+|+++.+++.+.++......|..   +.+|...++....    .+.+++.++   +  +.++ .+.+..+..++.|++.
T Consensus       151 ~~Gi~~~l~sg~~y~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~---~--~~~~-~~~~~~~~~~~~Gi~~  221 (290)
T TIGR00776       151 KKGILLLLMSTIGYLVYVVVAKAF---GVDGLSVLLPQAIGMVIGGIIFNLGH---I--LAKP-LKKYAILLNILPGLMW  221 (290)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHc---CCCcceehhHHHHHHHHHHHHHHHHH---h--cccc-hHHHHHHHHHHHHHHH
Confidence            679999999999999999999965   3888888666655    333333332   1  1122 2345555566688886


Q ss_pred             HHHHHHHHHHHhh-ccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccc----hhHHHHHHHHHHHh
Q 018219           82 ATIHINVYYIGMD-YVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKV----LGTIICVGGSLLFT  149 (359)
Q Consensus        82 ~~~~~~~~~~al~-~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~----ig~~l~~~Gv~l~~  149 (359)
                       ...+.+|+.+.+ +.+++.++++.+..|+...+++++++||+.++++      +    +|.++.+.|+.+..
T Consensus       222 -~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~------~~~~~iG~~lIi~~~~l~~  287 (290)
T TIGR00776       222 -GIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKRE------MIAISVGIILIIIAANILG  287 (290)
T ss_pred             -HHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcce------eehhHHHHHHHHHHHHHHh
Confidence             999999999999 9999999999999999999999999999999999      9    99999999998875

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.59  E-value=2e-06  Score=77.86  Aligned_cols=133  Identities=20%  Similarity=0.261  Sum_probs=106.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHH-HHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHH
Q 018219            6 YIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVV-YRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATI   84 (359)
Q Consensus         6 ~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~-~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   84 (359)
                      ..|.++.+.+.++|+...+..|... . .++..... +..........+....  ... .....+.+......|+++...
T Consensus       153 ~~g~~~~l~a~~~~a~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~g~~~~~i  227 (292)
T COG0697         153 LLGLLLALAAALLWALYTALVKRLS-R-LGPVTLALLLQLLLALLLLLLFFLS--GFG-APILSRAWLLLLYLGVFSTGL  227 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc-C-CChHHHHHHHHHHHHHHHHHHHHhc--ccc-ccCCHHHHHHHHHHHHHHHHH
Confidence            4799999999999999999999766 3 66766666 4443222222222211  111 335678899999999999668


Q ss_pred             HHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHh
Q 018219           85 HINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFT  149 (359)
Q Consensus        85 ~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~  149 (359)
                      ++.+++.+++..++...+++..+.|++..++++++++|+++..+      ++|+++.+.|+.+..
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~------~~G~~li~~g~~l~~  286 (292)
T COG0697         228 AYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQ------LLGAALVVLGVLLAS  286 (292)
T ss_pred             HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999      999999999998886

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.47  E-value=6.5e-07  Score=68.90  Aligned_cols=66  Identities=15%  Similarity=0.168  Sum_probs=61.2

Q ss_pred             HHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheee
Q 018219          259 GVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVL  324 (359)
Q Consensus       259 g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~  324 (359)
                      ++++.+.++.++..++++.+.+.+-.+.++.++++.+++++++||++++.+++|++++++|+.+..
T Consensus        43 ~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         43 ALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            346667899999999999999999999999999999999999999999999999999999988764

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.42  E-value=6.7e-06  Score=64.90  Aligned_cols=118  Identities=19%  Similarity=0.249  Sum_probs=90.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 018219            7 IPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIHI   86 (359)
Q Consensus         7 ~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   86 (359)
                      .++++++++.++-+..-++.|...++ .+........  ...+    .. .           ......+..|+..+.++.
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~-~g~~~~~~~~--~~~~----~~-~-----------~~p~~~i~lgl~~~~la~   62 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSR-LPLLSHAWDF--IAAL----LA-F-----------GLALRAVLLGLAGYALSM   62 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhh-CCCccchhHH--HHHH----HH-H-----------hccHHHHHHHHHHHHHHH
Confidence            47888999999989999999988764 5433322111  0000    00 0           001125678888889999


Q ss_pred             HHHHHHhhccCchhhhhhcchhHHHHHHHHHH--hcccccccccccccccchhHHHHHHHHHHHh
Q 018219           87 NVYYIGMDYVSPTVATALGNVVPSFTFLLAFL--LGMEKVKITSGRGRAKVLGTIICVGGSLLFT  149 (359)
Q Consensus        87 ~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l--~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~  149 (359)
                      .++..+++..|++.+.++.+..+.++.+.++.  ++||++++.+      ++|+++.++|++++.
T Consensus        63 ~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~------~iGi~lIi~GV~lv~  121 (129)
T PRK02971         63 LCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKK------TLGVACIMLGVWLIN  121 (129)
T ss_pred             HHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHHHhc
Confidence            99999999999999999999999888888885  8999999999      999999999999986

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.42  E-value=1.6e-06  Score=76.01  Aligned_cols=139  Identities=14%  Similarity=0.128  Sum_probs=112.2

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccc-cchhhHHHHHHHHHHHHH
Q 018219          185 IKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWK-LDWNVQFLTVMYCGVLNS  263 (359)
Q Consensus       185 ~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~g~~~~  263 (359)
                      ..|+++++.|-+.|+.--.+.|-+.+.  ++..+..++...+............+...-+. ...+..+......+++ .
T Consensus         6 ~~Gil~~l~Ay~lwG~lp~y~kll~~~--~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l-i   82 (293)
T COG2962           6 RKGILLALLAYLLWGLLPLYFKLLEPL--PATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL-I   82 (293)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHccC--CHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH-H
Confidence            479999999999999988887776544  56789999999988877776665543222221 2233466666676654 4


Q ss_pred             HHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeeec
Q 018219          264 ALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWG  326 (359)
Q Consensus       264 ~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~  326 (359)
                      .....++.+|.++..+..+|.-.+++|.+.+++|.++++|+++..|+++.++..+|+....+.
T Consensus        83 ~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~  145 (293)
T COG2962          83 GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWL  145 (293)
T ss_pred             HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Confidence            578889999999999999999999999999999999999999999999999999999887654

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=98.33  E-value=1.3e-05  Score=73.68  Aligned_cols=139  Identities=14%  Similarity=0.141  Sum_probs=112.3

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCCCCCC--CHHHHHHHHHHHHHH
Q 018219            4 KAYIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKP--SFAVMAKIFVLALLG   81 (359)
Q Consensus         4 ~~~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~   81 (359)
                      +..+|-++++.+++++|.+++.-+...++ .++.++..+-.+.+.++..+.....+++...+.  +.+....++..+++.
T Consensus       165 ~~i~GDll~l~~a~lya~~nV~~E~~v~~-~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~~~~l  243 (334)
T PF06027_consen  165 NPILGDLLALLGAILYAVSNVLEEKLVKK-APRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGYALCL  243 (334)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHhccc-CCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHHHHHH
Confidence            56889999999999999999999999885 899999888888888888887776677655444  334333333333333


Q ss_pred             HHHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhh
Q 018219           82 ATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTL  150 (359)
Q Consensus        82 ~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~  150 (359)
                       +..+.+.-..+++.++....+=.-++.++.+++..+++|+++++..      ++|.+++++|.++...
T Consensus       244 -f~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly------~~af~lIiiG~vvy~~  305 (334)
T PF06027_consen  244 -FLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLY------ILAFALIIIGFVVYNL  305 (334)
T ss_pred             -HHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHH------HHHHHHHHHHhheEEc
Confidence             6666667788889998888777888899999999999999999998      9999999999998864

Some of the sequences in this family are annotated as putative membrane proteins.

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=98.30  E-value=1e-05  Score=69.42  Aligned_cols=135  Identities=13%  Similarity=0.058  Sum_probs=115.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHH
Q 018219            6 YIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIH   85 (359)
Q Consensus         6 ~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   85 (359)
                      -.|..+++.+..+|+..-+..|..-+. .+.-.-+..-+.+++++.+|+-........  +++.-....+..+++...+.
T Consensus       147 p~Gv~~Al~AG~~Wa~YIv~G~r~g~~-~~g~~g~a~gm~vAaviv~Pig~~~ag~~l--~~p~ll~laLgvavlSSalP  223 (292)
T COG5006         147 PVGVALALGAGACWALYIVLGQRAGRA-EHGTAGVAVGMLVAALIVLPIGAAQAGPAL--FSPSLLPLALGVAVLSSALP  223 (292)
T ss_pred             HHHHHHHHHHhHHHHHHHHHcchhccc-CCCchHHHHHHHHHHHHHhhhhhhhcchhh--cChHHHHHHHHHHHHhcccc
Confidence            578899999999999999999987653 666777888899999999999765333322  45566777788999999999


Q ss_pred             HHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHh
Q 018219           86 INVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFT  149 (359)
Q Consensus        86 ~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~  149 (359)
                      +.+-..+++..|......+.++.|.+.++.+++++||+++..|      |+++...+.+.+=.+
T Consensus       224 YsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~q------wlaI~~ViaAsaG~~  281 (292)
T COG5006         224 YSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQ------WLAIAAVIAASAGST  281 (292)
T ss_pred             hHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHH------HHHHHHHHHHHhccc
Confidence            9999999999999999999999999999999999999999999      999998887766443

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=98.09  E-value=0.0016  Score=59.03  Aligned_cols=303  Identities=13%  Similarity=0.142  Sum_probs=179.6

Q ss_pred             CCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhcc-CC----CCCCCHHHHHHHH
Q 018219            1 MNMKAYIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLER-KQ----RPKPSFAVMAKIF   75 (359)
Q Consensus         1 M~~~~~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~-~~----~~~~~~~~~~~~~   75 (359)
                      |++....|+++..++.++-|+..+-.|..-  +.+-...=....+++.++ .|+...... +.    ....+...+....
T Consensus         1 m~~~ii~Gii~h~iGg~~~~sfy~P~kkvk--~WsWEs~Wlv~gi~swli-~P~~~a~l~ip~~~~i~~~~~~~~l~~~~   77 (344)
T PF06379_consen    1 MNSAIILGIIFHAIGGFASGSFYVPFKKVK--GWSWESYWLVQGIFSWLI-VPWLWALLAIPDFFSIYSATPASTLFWTF   77 (344)
T ss_pred             CCchHHHHHHHHHHHHHHhhhhccchhhcC--CccHHHHHHHHHHHHHHH-HHHHHHHHhCCcHHHHHHhCChhHHHHHH
Confidence            888889999999999999999999999653  255444444444444443 343322111 11    1223556777788


Q ss_pred             HHHHHHHHHHHHHHHHHhhccCchhhhhh-cchhHHHHHHHHHHhcccccc-cccccccccchhHHHHHHHHHHHhhhcc
Q 018219           76 VLALLGATIHINVYYIGMDYVSPTVATAL-GNVVPSFTFLLAFLLGMEKVK-ITSGRGRAKVLGTIICVGGSLLFTLWRS  153 (359)
Q Consensus        76 ~~g~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ila~l~~~e~~~-~~~~~~~~~~ig~~l~~~Gv~l~~~~~~  153 (359)
                      +.|++- ..+...|-.+.+|+..+..+-+ ..+...+-.++-.++.++--. ..+.-+..-++|++++++|+.+.... |
T Consensus        78 l~G~lW-GIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~A-G  155 (344)
T PF06379_consen   78 LFGVLW-GIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKA-G  155 (344)
T ss_pred             HHHHHH-hcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHH-H
Confidence            899988 8899999999999998877755 777777777776666442100 01112333489999999999999632 2


Q ss_pred             CcccccccccccccccCCCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHH-------hhhCCCchh----HHHHH
Q 018219          154 GYLFKSVVEKPLINIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKV-------FKEYPAPLS----MNTLI  222 (359)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~-------~~~~~~~~~----~~~~~  222 (359)
                      ...+          ++  .   ..+....+..+|+++++.+++..+..++-...-       .+...+|+.    .....
T Consensus       156 ~~Ke----------~~--~---~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv  220 (344)
T PF06379_consen  156 SMKE----------KE--L---GEEAKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVV  220 (344)
T ss_pred             Hhhh----------hh--h---ccchhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhh
Confidence            1111          00  0   001123567799999999999998887755321       111123332    22233


Q ss_pred             HHHHHHHHHHHHHHhc---CCCc---ccccchh---hHHHHHHHHHHHHHHHHHHHHHHHHhccCc----ceeeechhhH
Q 018219          223 CFFASLQTSFLALFFG---RNPT---IWKLDWN---VQFLTVMYCGVLNSALVYYLQTWCISVKGP----VFTAMFIPVQ  289 (359)
Q Consensus       223 ~~~~~~~~~~~~~~~~---~~~~---~~~~~~~---~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~----~~~s~~~~~~  289 (359)
                      +.-+.+.-...+++..   ++..   +.....+   ......++.|++ =...++.|..+-.+.+.    .--.+.+.+.
T Consensus       221 ~~GGf~tN~~yc~~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~l-Wy~qfffYg~G~s~lg~~~~~~sW~i~ma~~  299 (344)
T PF06379_consen  221 LWGGFITNLIYCLILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGVL-WYSQFFFYGMGESKLGASGPFSSWAIHMALI  299 (344)
T ss_pred             hhhHHHHHHHHHHHHHhhcCCCccccccccccchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCccccHHHHHHHHHH
Confidence            3344555556665532   2221   1111111   122333333322 23445555556566664    3345667788


Q ss_pred             HHHHHHHHHHHhcCCCc------chhhHhHHHHhhhhheeee
Q 018219          290 LVIVALFSIIAFAERLH------LSSLIGAFFIVAGLYCVLW  325 (359)
Q Consensus       290 pv~a~l~~~~~~~e~~~------~~~~~G~~li~~gv~l~~~  325 (359)
                      .+++-+++. .++|.-.      ..-+.|+++++.++.++-+
T Consensus       300 vl~snvwGl-~lkEWKg~s~kt~~vl~~G~~vlI~s~~ivG~  340 (344)
T PF06379_consen  300 VLFSNVWGL-ILKEWKGASKKTIRVLVLGIAVLILSVVIVGY  340 (344)
T ss_pred             HHHHHHHHH-HHHHhccCCcccHHHHHHHHHHHHHHHHHHhc
Confidence            889999997 5777432      3347888888888776543

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=98.04  E-value=9.7e-05  Score=67.73  Aligned_cols=132  Identities=14%  Similarity=0.163  Sum_probs=98.9

Q ss_pred             HHHHHHHHHHHHhhhC-CC--chhHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 018219          197 ALSSWLILQAKVFKEY-PA--PLSMNTLICFFASLQTSFLALFFGRNPTIWKLDWNVQFLTVMYCGVLNSALVYYLQTWC  273 (359)
Q Consensus       197 ~~a~~~i~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a  273 (359)
                      ++..+.+.++++.++. ..  |..++..++....+...+.......+  .   .....+......+ +...++..+.+.+
T Consensus        11 ~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~-~~~~~~~~~~~~a   84 (303)
T PF08449_consen   11 GCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFP--K---SRKIPLKKYAILS-FLFFLASVLSNAA   84 (303)
T ss_pred             HHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcccc--C---CCcChHHHHHHHH-HHHHHHHHHHHHH
Confidence            3445667778877653 23  67888888888887777666543311  1   1112344444555 4456788889999


Q ss_pred             HhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeeeccCCCCccC
Q 018219          274 ISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGKRKDSLAA  334 (359)
Q Consensus       274 ~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~~~~~~~  334 (359)
                      +++.+.....+.....|+..++++.+++|++.+..++.+.+++.+|+.+....+.++.++.
T Consensus        85 l~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~  145 (303)
T PF08449_consen   85 LKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSS  145 (303)
T ss_pred             HHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccccccccc
Confidence            9999999999999999999999999999999999999999999999999987765544443

; GO: 0055085 transmembrane transport

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=98.03  E-value=2.8e-06  Score=73.31  Aligned_cols=137  Identities=12%  Similarity=0.144  Sum_probs=101.8

Q ss_pred             chhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHHH
Q 018219          183 NWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWKLDWNVQFLTVMYCGVLN  262 (359)
Q Consensus       183 ~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~  262 (359)
                      ..+.|..+..++ ..+...++..++....  +|.......++.-.++..|..++..+.  -+....  .-.++++=|+. 
T Consensus        35 ~p~~gl~l~~vs-~ff~~~~vv~t~~~e~--~p~e~a~~r~l~~mlit~pcliy~~~~--v~gp~g--~R~~LiLRg~m-  106 (346)
T KOG4510|consen   35 KPNLGLLLLTVS-YFFNSCMVVSTKVLEN--DPMELASFRLLVRMLITYPCLIYYMQP--VIGPEG--KRKWLILRGFM-  106 (346)
T ss_pred             CCccCceehhhH-HHHhhHHHhhhhhhcc--ChhHhhhhhhhhehhhhheEEEEEeee--eecCCC--cEEEEEeehhh-
Confidence            456898888888 7777888888887765  567767677666566666555543221  111111  11222333433 


Q ss_pred             HHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeeecc
Q 018219          263 SALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGK  327 (359)
Q Consensus       263 ~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~  327 (359)
                      +..+.++.++++++.+-+.+.++...+|++++++++++++|+.|.....|..+.+.|++++.+..
T Consensus       107 G~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPp  171 (346)
T KOG4510|consen  107 GFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPP  171 (346)
T ss_pred             hhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCC
Confidence            34677888899999999999999999999999999999999999999999999999999998653

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=98.00  E-value=2.3e-05  Score=60.75  Aligned_cols=68  Identities=21%  Similarity=0.370  Sum_probs=58.4

Q ss_pred             HHHHHHHHHHHHHHHhccCcceeeec-hhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeeecc
Q 018219          260 VLNSALVYYLQTWCISVKGPVFTAMF-IPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGK  327 (359)
Q Consensus       260 ~~~~~~~~~l~~~a~~~~~~~~~s~~-~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~  327 (359)
                      +++.+++++++..++|+.+.+.+=.+ ..+.-+.+.+.+++++||++++.+++|+.+|++|++......
T Consensus        37 i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         37 LVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence            45557899999999999998775444 568899999999999999999999999999999999886544

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=97.94  E-value=5.1e-05  Score=69.07  Aligned_cols=125  Identities=19%  Similarity=0.224  Sum_probs=90.8

Q ss_pred             cchhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHH
Q 018219          182 ENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWKLDWNVQFLTVMYCGVL  261 (359)
Q Consensus       182 ~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~  261 (359)
                      .++..|..+++.++++.+....++|+...+.+. .....-                 ....++ ...+ .|    +.|.+
T Consensus         3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~-~~~~~~-----------------~~~~~~-l~~~-~W----~~G~~   58 (300)
T PF05653_consen    3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPR-GSLRAG-----------------SGGRSY-LRRP-LW----WIGLL   58 (300)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cccccc-----------------chhhHH-HhhH-HH----HHHHH
Confidence            346799999999999999999999987665321 000000                 000000 0111 22    22333


Q ss_pred             HHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeeeccCCC
Q 018219          262 NSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGKRKD  330 (359)
Q Consensus       262 ~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~~~  330 (359)
                      ...++..+...|+...+++.++++..+..++..+++..++||+++..++.|+.+++.|..+......++
T Consensus        59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~  127 (300)
T PF05653_consen   59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKE  127 (300)
T ss_pred             HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCC
Confidence            345666778889999999999999999999999999999999999999999999999998876554433

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.87  E-value=0.00027  Score=56.56  Aligned_cols=132  Identities=17%  Similarity=0.169  Sum_probs=97.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHHHHHHH
Q 018219          187 GSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWKLDWNVQFLTVMYCGVLNSALV  266 (359)
Q Consensus       187 G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~  266 (359)
                      ..++++.++++-++...++.++.++..+|...+...+..+.+.......+.++.  ........+|+...  |-+.+...
T Consensus         2 ~~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p~w~~l--GG~lG~~~   77 (138)
T PF04657_consen    2 YILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRP--SLASLSSVPWWAYL--GGLLGVFF   77 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCChHHhc--cHHHHHHH
Confidence            357889999999999999999999876789999999999998888877766543  22212222333322  33555677


Q ss_pred             HHHHHHHHhccCcceeeech-hhHHHHHHHHHHH----HhcCCCcchhhHhHHHHhhhhhe
Q 018219          267 YYLQTWCISVKGPVFTAMFI-PVQLVIVALFSII----AFAERLHLSSLIGAFFIVAGLYC  322 (359)
Q Consensus       267 ~~l~~~a~~~~~~~~~s~~~-~~~pv~a~l~~~~----~~~e~~~~~~~~G~~li~~gv~l  322 (359)
                      ..+....+++.+++....+. .-+-+.+.+++.+    .-++++++.+++|.+++++|+.+
T Consensus        78 V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   78 VLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            77888889999987765554 4456677777775    24567899999999999999864

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.84  E-value=0.00028  Score=53.70  Aligned_cols=64  Identities=16%  Similarity=0.225  Sum_probs=58.0

Q ss_pred             HHHHHHHHHHHHHHhhccCchhhhhh-cchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHH
Q 018219           79 LLGATIHINVYYIGMDYVSPTVATAL-GNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLF  148 (359)
Q Consensus        79 ~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~  148 (359)
                      ..++..++++...+++++|.+.+..+ .....+.+++++++++||++++.+      ++|+.+.+.|++.+
T Consensus        42 ~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~------~~gi~lIi~GVi~l  106 (109)
T PRK10650         42 LAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKG------WIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHHHh
Confidence            34447888899999999999999877 779999999999999999999999      99999999999876

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=97.80  E-value=0.0003  Score=62.25  Aligned_cols=117  Identities=12%  Similarity=0.002  Sum_probs=89.3

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHH
Q 018219            4 KAYIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGAT   83 (359)
Q Consensus         4 ~~~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   83 (359)
                      +..++++.++++.+.+....++.|..   +.+|....+-+..-..+.-.++.... ++.   +..|..++-++.|++. .
T Consensus       135 ~~~kgi~~Ll~stigy~~Y~~~~~~~---~~~~~~~~lPqaiGm~i~a~i~~~~~-~~~---~~~k~~~~nil~G~~w-~  206 (269)
T PF06800_consen  135 NMKKGILALLISTIGYWIYSVIPKAF---HVSGWSAFLPQAIGMLIGAFIFNLFS-KKP---FFEKKSWKNILTGLIW-G  206 (269)
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHHhc---CCChhHhHHHHHHHHHHHHHHHhhcc-ccc---ccccchHHhhHHHHHH-H
Confidence            34679999999999999999998863   48887777655433333333333322 221   2234555667788888 9


Q ss_pred             HHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhccccccccc
Q 018219           84 IHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITS  128 (359)
Q Consensus        84 ~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~  128 (359)
                      .++.+++.+.+....+.+..+.++.+++..+.+.+++||+-++++
T Consensus       207 ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke  251 (269)
T PF06800_consen  207 IGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKE  251 (269)
T ss_pred             HHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhh
Confidence            999999999999999999999999999999999999999987776

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.69  E-value=0.00093  Score=53.49  Aligned_cols=130  Identities=15%  Similarity=0.123  Sum_probs=95.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 018219            9 YMAIIFNQFAFAGSNILMKIALERGLN-QLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIHIN   87 (359)
Q Consensus         9 ~~~~l~~~~~~g~~~~~~k~~~~~~~~-p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   87 (359)
                      .++++++..+-+....+.....++ .. |...+++.+..+.+++..+....+++..+..+..+|+. ..-|+++ ...-.
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~~~-~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w~-~lGG~lG-~~~V~   79 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLGKA-LGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWWA-YLGGLLG-VFFVL   79 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH-hCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChHH-hccHHHH-HHHHH
Confidence            466777778888888887777765 65 99999999999999998888776554333332223333 3477777 88888


Q ss_pred             HHHHHhhccCchhhhhhcch-hHHHHHHHHHH----hcccccccccccccccchhHHHHHHHHHH
Q 018219           88 VYYIGMDYVSPTVATALGNV-VPSFTFLLAFL----LGMEKVKITSGRGRAKVLGTIICVGGSLL  147 (359)
Q Consensus        88 ~~~~al~~~~~~~~~~l~~~-~pi~~~ila~l----~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l  147 (359)
                      +.......++++.+..+.-+ +-+...++..+    .-++++++.+      ++|+++.++|+.+
T Consensus        80 ~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r------~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   80 SNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRR------ILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHH------HHHHHHHHHHHhC
Confidence            88999999999988877444 44455666654    2457777776      9999999999864

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.67  E-value=0.00012  Score=56.07  Aligned_cols=68  Identities=22%  Similarity=0.380  Sum_probs=57.2

Q ss_pred             HHHHHHHHHHHHHHHhccCccee-eechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeeecc
Q 018219          260 VLNSALVYYLQTWCISVKGPVFT-AMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGK  327 (359)
Q Consensus       260 ~~~~~~~~~l~~~a~~~~~~~~~-s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~  327 (359)
                      +++..+++.++..++++.+.+.+ +....+.-+.+.+.++++|+|++++.+++|+.++++|+++.+...
T Consensus        37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            34557888999999999888764 444667888899999999999999999999999999999986543

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.64  E-value=0.00022  Score=53.43  Aligned_cols=66  Identities=18%  Similarity=0.249  Sum_probs=59.4

Q ss_pred             HHHHHHHHHHHHHHHhhccCchhhhhh-cchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHh
Q 018219           78 ALLGATIHINVYYIGMDYVSPTVATAL-GNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFT  149 (359)
Q Consensus        78 g~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~  149 (359)
                      ..+++..++.+...|++++|.+.+..+ .....+.+++.++++++|+++..+      ++|+.+.++|++.+-
T Consensus        36 ~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~------~~gl~LiiaGvi~Lk  102 (106)
T COG2076          36 TIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIK------LLGLALILAGVIGLK  102 (106)
T ss_pred             HHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHH------HHHHHHHHHHHHHhh
Confidence            344457888899999999999999877 899999999999999999999998      999999999998874

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.63  E-value=0.00032  Score=53.65  Aligned_cols=68  Identities=15%  Similarity=0.263  Sum_probs=60.9

Q ss_pred             HHHHHHHHHHHHHHHHhhccCchhhhhh-cchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhh
Q 018219           77 LALLGATIHINVYYIGMDYVSPTVATAL-GNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTL  150 (359)
Q Consensus        77 ~g~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~  150 (359)
                      ..+.++.++..++..+++.+|.+.+..+ .....+.++++++++++|++++.+      ++|+.+.++|++++-.
T Consensus        35 ~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~------~~gi~lIi~GVi~l~l  103 (110)
T PRK09541         35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPA------IIGMMLICAGVLVINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHHhc
Confidence            3455558888889999999999999988 778999999999999999999999      9999999999999853

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.62  E-value=0.00021  Score=55.37  Aligned_cols=68  Identities=22%  Similarity=0.237  Sum_probs=61.2

Q ss_pred             HHHHHHHHHHHHHHHHhhccCchhhhhh-cchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhh
Q 018219           77 LALLGATIHINVYYIGMDYVSPTVATAL-GNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTL  150 (359)
Q Consensus        77 ~g~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~  150 (359)
                      ..+..+..+.+++..+++++|.+.+..+ ....-+.++++++++++|++++.+      ++|+.+.++|++++-.
T Consensus        35 ~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~------~~gi~lIi~GVi~l~l  103 (120)
T PRK10452         35 LMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMK------IAGLTTLVAGIVLIKS  103 (120)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHhhc
Confidence            4455558899999999999999999988 579999999999999999999999      9999999999988853

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.56  E-value=0.00033  Score=53.00  Aligned_cols=65  Identities=12%  Similarity=0.100  Sum_probs=59.2

Q ss_pred             HHHHHHHHHHHHHHhhccCchhhhhh-cchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHh
Q 018219           79 LLGATIHINVYYIGMDYVSPTVATAL-GNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFT  149 (359)
Q Consensus        79 ~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~  149 (359)
                      +.++..++++...+++.+|.+.+..+ .....+.+++++++++||++++.+      ++|+.+.++|++.+-
T Consensus        36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~------~~gi~lIi~GVv~l~  101 (105)
T PRK11431         36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPAR------LLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHhhh
Confidence            44558889999999999999999877 779999999999999999999999      999999999999874

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.49  E-value=0.0012  Score=52.81  Aligned_cols=139  Identities=14%  Similarity=0.117  Sum_probs=94.9

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHHHHH
Q 018219          185 IKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWKLDWNVQFLTVMYCGVLNSA  264 (359)
Q Consensus       185 ~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~  264 (359)
                      ....+.+++++++..+..-...++.+...+|.......+..+.+++..+.++.++. ..+.......|+..  +|-+...
T Consensus         4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~-~~~a~~~~~pwW~~--~GG~lGa   80 (150)
T COG3238           4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGH-PGLAAVASAPWWAW--IGGLLGA   80 (150)
T ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCC-CchhhccCCchHHH--Hccchhh
Confidence            36778899999999999999999999877899999999999988888777774332 22221122233322  2223333


Q ss_pred             HHHHHHHHHHhccCcc-eeeechhhHHHHHHHHHHHHhc----CCCcchhhHhHHHHhhhhheeeec
Q 018219          265 LVYYLQTWCISVKGPV-FTAMFIPVQLVIVALFSIIAFA----ERLHLSSLIGAFFIVAGLYCVLWG  326 (359)
Q Consensus       265 ~~~~l~~~a~~~~~~~-~~s~~~~~~pv~a~l~~~~~~~----e~~~~~~~~G~~li~~gv~l~~~~  326 (359)
                      +--+.......+.+++ .......-+-+.+++++.+=+.    .+++...+.|++++++|+++..+.
T Consensus        81 ~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~  147 (150)
T COG3238          81 IFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRF  147 (150)
T ss_pred             hhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhccc
Confidence            3444445556666664 4555566677778888876443    467999999999999997666543

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=97.48  E-value=0.00043  Score=62.91  Aligned_cols=138  Identities=19%  Similarity=0.293  Sum_probs=113.4

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHh---cCCChHHHHHHHHHHHHHHHH-HHHhhhccCCC----C-CCCHHHHHHH
Q 018219            4 KAYIPYMAIIFNQFAFAGSNILMKIALE---RGLNQLVFVVYRHVIAMLLLG-PFAYVLERKQR----P-KPSFAVMAKI   74 (359)
Q Consensus         4 ~~~~~~~~~l~~~~~~g~~~~~~k~~~~---~~~~p~~~~~~r~~~a~l~l~-~~~~~~~~~~~----~-~~~~~~~~~~   74 (359)
                      -...|.+.++.+.+..+...++.|..+.   .+++++......--++...++ |+.....+...    . ..+...+. .
T Consensus       160 fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~-~  238 (316)
T KOG1441|consen  160 FNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLI-L  238 (316)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHH-H
Confidence            3578999999999999999999999883   348899999888888888888 88776555332    1 22333333 3


Q ss_pred             HHHHHHHHHHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHh
Q 018219           75 FVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFT  149 (359)
Q Consensus        75 ~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~  149 (359)
                      ....++. .+.+...|..+..+++-.-++....--.++.+.+++++++++++.+      ..|++++++|+.+-.
T Consensus       239 ~~~sv~~-f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n------~~G~~iai~Gv~~Y~  306 (316)
T KOG1441|consen  239 LLNSVLA-FLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLN------ALGYAIAILGVFLYS  306 (316)
T ss_pred             HHHHHHH-HHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhh------HHHHHHHHHHHHHHH
Confidence            3444666 8888999999999999999999999889999999999999999999      999999999998876

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=97.47  E-value=0.00032  Score=53.53  Aligned_cols=110  Identities=15%  Similarity=0.248  Sum_probs=77.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018219           13 IFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIHINVYYIG   92 (359)
Q Consensus        13 l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a   92 (359)
                      ++..++||.++++.|...+ +.++..-.. |..-....     .+           ..|.+ .+ ++...-.+...|++.
T Consensus         2 l~Vg~~WG~Tnpfik~g~~-~~~~~~~~~-~~~~~~~~-----Ll-----------~n~~y-~i-pf~lNq~GSv~f~~~   61 (113)
T PF10639_consen    2 LLVGILWGCTNPFIKRGSS-GLEKVKASL-QLLQEIKF-----LL-----------LNPKY-II-PFLLNQSGSVLFFLL   61 (113)
T ss_pred             eeehHHhcCchHHHHHHHh-hcCCccchH-HHHHHHHH-----HH-----------HhHHH-HH-HHHHHHHHHHHHHHH
Confidence            3567899999999999876 355433331 21111111     01           11222 22 333336677888999


Q ss_pred             hhccCchhhhhh-cchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHH
Q 018219           93 MDYVSPTVATAL-GNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLF  148 (359)
Q Consensus        93 l~~~~~~~~~~l-~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~  148 (359)
                      +...+.+.+.++ +++.=++|++.++++.+|..+++.      ++|+.+.+.|+.+.
T Consensus        62 L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~------~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   62 LGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRT------WLGMALILAGVALC  112 (113)
T ss_pred             HhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhH------HHHHHHHHcCeeee
Confidence            999999999999 589999999999888888888888      99999999998764

Many members are annotated as potential transmembrane proteins.

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.35  E-value=0.00045  Score=51.80  Aligned_cols=66  Identities=26%  Similarity=0.417  Sum_probs=57.0

Q ss_pred             HHHHHHHHHHHHHHhccCcce-eeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeeec
Q 018219          261 LNSALVYYLQTWCISVKGPVF-TAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWG  326 (359)
Q Consensus       261 ~~~~~~~~l~~~a~~~~~~~~-~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~  326 (359)
                      ++...+|.+...++|+.+.+. .++..-...+.+.+.++++|+|++++.+++|..++++|++..+..
T Consensus        38 v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~  104 (106)
T COG2076          38 VGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG  104 (106)
T ss_pred             HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence            334678899999999988754 677788888999999999999999999999999999999987654

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=97.34  E-value=0.00087  Score=59.22  Aligned_cols=79  Identities=23%  Similarity=0.301  Sum_probs=69.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeeeccCCC
Q 018219          251 QFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGKRKD  330 (359)
Q Consensus       251 ~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~~~  330 (359)
                      +...+..-+ +...+.+.+.+.++++.+|+...++..+..+++.+++.++++.+++..||.+..++++|+.+........
T Consensus        16 ~~~~~~vPA-~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~   94 (244)
T PF04142_consen   16 DTLKLAVPA-LLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS   94 (244)
T ss_pred             HHHHHHHHH-HHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence            445555666 3467888999999999999999999999999999999999999999999999999999999998766554

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=97.30  E-value=0.0051  Score=54.24  Aligned_cols=193  Identities=12%  Similarity=0.037  Sum_probs=117.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 018219            8 PYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIHIN   87 (359)
Q Consensus         8 ~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   87 (359)
                      |+++++++.+++|++++-.|.. +. -|++.+-++......++-+.+....   ..++    -+...++-|.+- +.++.
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~-~~-gDg~~fQw~~~~~i~~~g~~v~~~~---~~p~----f~p~amlgG~lW-~~gN~   70 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKF-DT-GDGFFFQWVMCSGIFLVGLVVNLIL---GFPP----FYPWAMLGGALW-ATGNI   70 (254)
T ss_pred             CchhHHHHHHHhcccceeeEec-cC-CCcHHHHHHHHHHHHHHHHHHHHhc---CCCc----ceeHHHhhhhhh-hcCce
Confidence            5778999999999999999953 43 6787777777655555555554442   2222    233455566666 88999


Q ss_pred             HHHHHhhccCchhhhhhcchhHHHH-HHHHHH-hcccccccccccccccchhHHHHHHHHHHHhhhccCccc-cccc--c
Q 018219           88 VYYIGMDYVSPTVATALGNVVPSFT-FLLAFL-LGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLF-KSVV--E  162 (359)
Q Consensus        88 ~~~~al~~~~~~~~~~l~~~~pi~~-~ila~l-~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~-~~~~--~  162 (359)
                      +-.-.++.+..+....+-++.-+.+ -..+++ +++++.+.. +.....++|++++++|..+..+.+.+... .+++  +
T Consensus        71 ~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~-~~~~Ln~~G~~l~~~~~~~f~fik~~~~~~~~~~~~~  149 (254)
T PF07857_consen   71 LVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVP-SSPWLNYIGVALVLVSGIIFSFIKSEEKEPKKSSEET  149 (254)
T ss_pred             eehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceecccccccc-chhHHHHHHHHHHHHHHHheeeecCCCCCcccccccc
Confidence            9999999999999999966644333 333333 444433322 12233478888888888887654332211 0111  1


Q ss_pred             cccccccCCC-cc----cccc-----cCccchhhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 018219          163 KPLINIYNNN-AD----HLRH-----HGKENWIKGSALILTSHIALSSWLILQAKVFKE  211 (359)
Q Consensus       163 ~~~~~~~~~~-~~----~~~~-----~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~  211 (359)
                      ....+..++. ++    +..+     ....+...|..+++++++.|+...+=...+.++
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~S~vd~l~~~~~RivG~~LAv~aGvlyGs~fvPv~Yi~~~  208 (254)
T PF07857_consen  150 PLSIEDVIEIEDDSENSEDSSWVDELSPRKKRIVGIILAVFAGVLYGSNFVPVIYIQDH  208 (254)
T ss_pred             ccccccccccccccccccccccccccccccchhHhHHHHHHHHHHHhcccchHHHHHhC
Confidence            1111101111 11    0000     112357789999999999999988877777665

The region concerned is approximately 280 residues long.

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.29  E-value=0.00071  Score=51.22  Aligned_cols=65  Identities=18%  Similarity=0.206  Sum_probs=56.7

Q ss_pred             HHHHHHHHHHHHHHhccCcce-eeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeee
Q 018219          261 LNSALVYYLQTWCISVKGPVF-TAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLW  325 (359)
Q Consensus       261 ~~~~~~~~l~~~a~~~~~~~~-~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~  325 (359)
                      ++...++++...++|+.+.+. .++...+..+.+.+.+++++||++++.+++|+.++++|++..+.
T Consensus        37 ~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l  102 (105)
T PRK11431         37 TAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL  102 (105)
T ss_pred             HHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence            445789999999999988855 56777788899999999999999999999999999999998753

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.28  E-value=0.0029  Score=48.23  Aligned_cols=64  Identities=14%  Similarity=0.168  Sum_probs=55.8

Q ss_pred             HHHHHHHHHHHHHHhccCcce-eeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheee
Q 018219          261 LNSALVYYLQTWCISVKGPVF-TAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVL  324 (359)
Q Consensus       261 ~~~~~~~~l~~~a~~~~~~~~-~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~  324 (359)
                      .+..+++++...++|+.+.+. .++...+..+.+.+.+++++||++++.+++|+.+++.|+...+
T Consensus        43 ~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         43 AAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            445689999999999998865 5667778889999999999999999999999999999998764

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=97.10  E-value=0.0036  Score=57.12  Aligned_cols=142  Identities=15%  Similarity=0.230  Sum_probs=113.1

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHhcC---CChHHHHHHHHHHHHHHHHHHHhhhcc---CCCCCCCHHHHHHHHHH
Q 018219            4 KAYIPYMAIIFNQFAFAGSNILMKIALERG---LNQLVFVVYRHVIAMLLLGPFAYVLER---KQRPKPSFAVMAKIFVL   77 (359)
Q Consensus         4 ~~~~~~~~~l~~~~~~g~~~~~~k~~~~~~---~~p~~~~~~r~~~a~l~l~~~~~~~~~---~~~~~~~~~~~~~~~~~   77 (359)
                      +...|-++++++++++|...++.|.-.+.+   .+--.+--+-.++..++++|..++...   .+..-++..+....+..
T Consensus       244 ~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~~  323 (416)
T KOG2765|consen  244 RPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVVFN  323 (416)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeeeHh
Confidence            457899999999999999999999876432   444444445556666677655544333   22223455666777888


Q ss_pred             HHHHHHHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhh
Q 018219           78 ALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLW  151 (359)
Q Consensus        78 g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~  151 (359)
                      ++++.+++.++|..|.-.+++-.+++-..++....++.-.++.++++++..      ++|.+.+++|-+++...
T Consensus       324 ~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~------iiGsi~Ifv~Fv~vn~~  391 (416)
T KOG2765|consen  324 NLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALY------IIGSIPIFVGFVIVNIS  391 (416)
T ss_pred             hHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHhheecc
Confidence            999999999999999999999999999999999999999999999999998      99999999999988743

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.99  E-value=0.0034  Score=46.58  Aligned_cols=56  Identities=23%  Similarity=0.366  Sum_probs=35.1

Q ss_pred             HHHHHHHHHHHHHHhccCccee-eechhhHHHHHHHHHHHHhcCCCcchhhHhHHHH
Q 018219          261 LNSALVYYLQTWCISVKGPVFT-AMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFI  316 (359)
Q Consensus       261 ~~~~~~~~l~~~a~~~~~~~~~-s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li  316 (359)
                      .+..++++++..++|+.+.+.+ ++...+..+...+.+.+++||++|+.+++|+.+|
T Consensus        37 ~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   37 VGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            3567889999999999999887 5556799999999999999999999999999876

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.96  E-value=0.0059  Score=45.32  Aligned_cols=57  Identities=16%  Similarity=0.165  Sum_probs=35.6

Q ss_pred             HHHHHHHHHHHHHHHhhccCchhhhhh-cchhHHHHHHHHHHhcccccccccccccccchhHHH
Q 018219           78 ALLGATIHINVYYIGMDYVSPTVATAL-GNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTII  140 (359)
Q Consensus        78 g~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l  140 (359)
                      .+..+..+..++..+++++|.+.+..+ ..+..+.+.+++.+++||+++..+      ++|+.+
T Consensus        35 ~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~------~~gi~l   92 (93)
T PF00893_consen   35 AVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSK------WLGIGL   92 (93)
T ss_dssp             HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------------HHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------Hhheee
Confidence            344558888999999999999999877 679999999999999999999998      998865

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=96.74  E-value=0.0011  Score=59.39  Aligned_cols=130  Identities=18%  Similarity=0.225  Sum_probs=99.9

Q ss_pred             ccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHH
Q 018219          181 KENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWKLDWNVQFLTVMYCGV  260 (359)
Q Consensus       181 ~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~  260 (359)
                      ..++..|..+++.+.+..+...++.|+..++...    .              ..-.........   .   -...+.|+
T Consensus        16 ~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~----~--------------~~ra~~gg~~yl---~---~~~Ww~G~   71 (335)
T KOG2922|consen   16 SSDNIIGLVLAISSSIFIGSSFILKKKGLKRAGA----S--------------GLRAGEGGYGYL---K---EPLWWAGM   71 (335)
T ss_pred             ccCceeeeeehhhccEEEeeehhhhHHHHHHHhh----h--------------cccccCCCcchh---h---hHHHHHHH
Confidence            3456789999999999999999998887766311    0              000011111111   1   12335677


Q ss_pred             HHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeeeccCCCCccC
Q 018219          261 LNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGKRKDSLAA  334 (359)
Q Consensus       261 ~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~~~~~~~  334 (359)
                      +...++..+.+.|....+++.++++..++.+++.+++..+++|.+++...+|+++.++|..+...+.+++++..
T Consensus        72 ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~  145 (335)
T KOG2922|consen   72 LTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEIE  145 (335)
T ss_pred             HHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccccc
Confidence            77788999999999999999999999999999999999999999999999999999999988887766655443

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=96.45  E-value=0.07  Score=42.88  Aligned_cols=136  Identities=13%  Similarity=0.100  Sum_probs=87.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHH
Q 018219            6 YIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIH   85 (359)
Q Consensus         6 ~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   85 (359)
                      ...++..+.+..+-.....+...+.+..-+|....++.+..+..++..+.+...++......++.-++.+.-|.++ ..+
T Consensus         4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lG-a~~   82 (150)
T COG3238           4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLG-AIF   82 (150)
T ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchh-hhh
Confidence            4556677777777777777777666652359999999999999998888777444333322233334445556666 666


Q ss_pred             HHHHHHHhhccCchhhhhh-cchhHHHHHHHHHHhc-c---cccccccccccccchhHHHHHHHHHHH
Q 018219           86 INVYYIGMDYVSPTVATAL-GNVVPSFTFLLAFLLG-M---EKVKITSGRGRAKVLGTIICVGGSLLF  148 (359)
Q Consensus        86 ~~~~~~al~~~~~~~~~~l-~~~~pi~~~ila~l~~-~---e~~~~~~~~~~~~~ig~~l~~~Gv~l~  148 (359)
                      -..-........++....+ ..-+.+...++..+=. +   ++++..      |++|+++.++|+.++
T Consensus        83 vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~------r~lgi~L~l~gil~~  144 (150)
T COG3238          83 VTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLP------RILGILLVLAGILLA  144 (150)
T ss_pred             hhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHH------HHHHHHHHHHHHHHh
Confidence            5555666666766666555 4444555555554322 2   444444      499999999995554

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=96.42  E-value=0.058  Score=48.12  Aligned_cols=139  Identities=14%  Similarity=0.157  Sum_probs=111.7

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHh-cCCChHHHHHHHHHHHHHHHHHHHhhhccCCCC-----CCCHHHHHHHHHH
Q 018219            4 KAYIPYMAIIFNQFAFAGSNILMKIALE-RGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRP-----KPSFAVMAKIFVL   77 (359)
Q Consensus         4 ~~~~~~~~~l~~~~~~g~~~~~~k~~~~-~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~   77 (359)
                      +...|+.++....++=|.++..-....+ ..+++..+.+.-.+..++.-...... ....++     +.+++-++-+++.
T Consensus       169 ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~-qg~~~~av~F~~~hp~~~~Di~l~  247 (327)
T KOG1581|consen  169 NSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLIL-QGHLLPAVSFIKEHPDVAFDILLY  247 (327)
T ss_pred             CchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhc-CCCCchHHHHHHcChhHHHHHHHH
Confidence            4578999999999988888776665553 44889999988888887776666433 222222     2356777888889


Q ss_pred             HHHHHHHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhh
Q 018219           78 ALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTL  150 (359)
Q Consensus        78 g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~  150 (359)
                      +.++ ..++.+.++-++.-.+-..+.++.+--++..+++.++++.+++..|      |+|+.+.+.|+.+=..
T Consensus       248 s~~g-avGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q------~~g~~iVFg~i~l~~~  313 (327)
T KOG1581|consen  248 STCG-AVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQ------WLGVLIVFGGIFLEIL  313 (327)
T ss_pred             HHhh-hhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhh------ccCeeeehHHHHHHHH
Confidence            9999 9999999999999888888888888899999999999999999999      9999999999887654

>PRK13499 rhamnose-proton symporter; Provisional

Probab=96.37  E-value=0.18  Score=46.63  Aligned_cols=145  Identities=11%  Similarity=0.027  Sum_probs=92.3

Q ss_pred             cchHHHHHHHHHHHHHHHHH-------HHHHHHHhcCCChHHHHHHHHH---HHHHHH-HHHHhhhcc--CCC-----CC
Q 018219            4 KAYIPYMAIIFNQFAFAGSN-------ILMKIALERGLNQLVFVVYRHV---IAMLLL-GPFAYVLER--KQR-----PK   65 (359)
Q Consensus         4 ~~~~~~~~~l~~~~~~g~~~-------~~~k~~~~~~~~p~~~~~~r~~---~a~l~l-~~~~~~~~~--~~~-----~~   65 (359)
                      +..+|++.++++.+..+...       +..+...+.+.++.....-.+.   ++..+. ..++.++.+  ++.     ++
T Consensus       171 ~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~~  250 (345)
T PRK13499        171 NLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKNKDLSLKADFS  250 (345)
T ss_pred             chHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchhcc
Confidence            34789999999999998888       5565544456676655554444   333332 223332211  221     11


Q ss_pred             CC----HHHHHHHHHHHHHHHHHHHHHHHHHhhccCchhhhh---hc-chhHHHHHHHHHHhcccccccccccccccchh
Q 018219           66 PS----FAVMAKIFVLALLGATIHINVYYIGMDYVSPTVATA---LG-NVVPSFTFLLAFLLGMEKVKITSGRGRAKVLG  137 (359)
Q Consensus        66 ~~----~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~---l~-~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig  137 (359)
                      .+    .+......+.|++- .+.+.+|..+-+..+......   +. ++..++..+.+. ++||+-+..+|..+.-++|
T Consensus       251 ~~~~~~~~n~l~~~l~G~~W-~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G  328 (345)
T PRK13499        251 LAKPLLITNVLLSALAGVMW-YLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLG  328 (345)
T ss_pred             ccchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHH
Confidence            12    23333336666666 788888888888876554444   54 666677777776 6999988555566667889


Q ss_pred             HHHHHHHHHHHhh
Q 018219          138 TIICVGGSLLFTL  150 (359)
Q Consensus       138 ~~l~~~Gv~l~~~  150 (359)
                      +++.++|..++..
T Consensus       329 ~vliI~g~~lig~  341 (345)
T PRK13499        329 CVVIILAANIVGL  341 (345)
T ss_pred             HHHHHHHHHHHhh
Confidence            9999999988864

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=96.35  E-value=0.0058  Score=53.90  Aligned_cols=132  Identities=13%  Similarity=0.014  Sum_probs=77.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHHHHHHH
Q 018219          187 GSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWKLDWNVQFLTVMYCGVLNSALV  266 (359)
Q Consensus       187 G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~  266 (359)
                      |.+.+++|+++++...+=.|+....  |+.....+++....+.......+.+.+  .+  .      .+..+|-..=..+
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~~~g--Dg~~fQw~~~~~i~~~g~~v~~~~~~p--~f--~------p~amlgG~lW~~g   68 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKFDTG--DGFFFQWVMCSGIFLVGLVVNLILGFP--PF--Y------PWAMLGGALWATG   68 (254)
T ss_pred             CchhHHHHHHHhcccceeeEeccCC--CcHHHHHHHHHHHHHHHHHHHHhcCCC--cc--e------eHHHhhhhhhhcC
Confidence            5678899999999998888876654  667766666665555555544433221  11  0      0111111112234


Q ss_pred             HHHHHHHHhccCcceee-echhhHHHHHHHHHHH-HhcCCC-----cchhhHhHHHHhhhhheeeeccCCC
Q 018219          267 YYLQTWCISVKGPVFTA-MFIPVQLVIVALFSII-AFAERL-----HLSSLIGAFFIVAGLYCVLWGKRKD  330 (359)
Q Consensus       267 ~~l~~~a~~~~~~~~~s-~~~~~~pv~a~l~~~~-~~~e~~-----~~~~~~G~~li~~gv~l~~~~~~~~  330 (359)
                      +.+-.-.+|..+-...- +....+.+.+...+.+ +||+.+     .+..++|++++++|..+...-|...
T Consensus        69 N~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~  139 (254)
T PF07857_consen   69 NILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEE  139 (254)
T ss_pred             ceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence            44444455555544332 2234466777777664 454432     4568999999999988887655444

The region concerned is approximately 280 residues long.

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=96.23  E-value=0.0041  Score=53.54  Aligned_cols=132  Identities=19%  Similarity=0.145  Sum_probs=87.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHHHHHHH
Q 018219          187 GSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWKLDWNVQFLTVMYCGVLNSALV  266 (359)
Q Consensus       187 G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~  266 (359)
                      ..++++.=++.|+..-....+...   .|..-+.-+.+-+.++.+.+.++ ..+...     ...+..-...| +.=.++
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~GG---~p~qQ~lGtT~GALifaiiv~~~-~~p~~T-----~~~~iv~~isG-~~Ws~G   72 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKFGG---KPYQQTLGTTLGALIFAIIVFLF-VSPELT-----LTIFIVGFISG-AFWSFG   72 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeecCC---ChhHhhhhccHHHHHHHHHHhee-ecCccc-----hhhHHHHHHhh-hHhhhh
Confidence            467888889999987777666543   34544444444444444444432 111111     11233233333 334578


Q ss_pred             HHHHHHHHhccCcceeeechh-hHHHHHHHHHHHHhcCCCcchh----hHhHHHHhhhhheeeeccC
Q 018219          267 YYLQTWCISVKGPVFTAMFIP-VQLVIVALFSIIAFAERLHLSS----LIGAFFIVAGLYCVLWGKR  328 (359)
Q Consensus       267 ~~l~~~a~~~~~~~~~s~~~~-~~pv~a~l~~~~~~~e~~~~~~----~~G~~li~~gv~l~~~~~~  328 (359)
                      +...+++++..+.+.+.++.. ++.+-+.+++.+.|||..+..+    .++.++++.|+.+..+.++
T Consensus        73 Q~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~  139 (288)
T COG4975          73 QANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDR  139 (288)
T ss_pred             hhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecc
Confidence            889999999999999988764 6778889999999999998875    4567888899998876554

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=96.14  E-value=0.23  Score=45.49  Aligned_cols=140  Identities=17%  Similarity=0.101  Sum_probs=91.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhCC---CchhHHHHHHHHHHHHHHHHHHHhcCC-----C---cccccchhhHHHHHHH
Q 018219          189 ALILTSHIALSSWLILQAKVFKEYP---APLSMNTLICFFASLQTSFLALFFGRN-----P---TIWKLDWNVQFLTVMY  257 (359)
Q Consensus       189 ~l~l~a~~~~a~~~i~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~---~~~~~~~~~~~~~l~~  257 (359)
                      +..+...+-++......|...++..   .|.+.....-..-.++.....+..++.     .   .......+.....+..
T Consensus        18 ~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~v   97 (345)
T KOG2234|consen   18 LSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVSV   97 (345)
T ss_pred             HHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHHH
Confidence            4444455556666666666554421   334455555545455555455443211     0   1111111112233333


Q ss_pred             HHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeeeccCC
Q 018219          258 CGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGKRK  329 (359)
Q Consensus       258 ~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~~  329 (359)
                      -+ +...+-+.+++.+..+.++++..+...+..+.+.++..++++++++..||...++...|+.+.+.....
T Consensus        98 Pa-~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~  168 (345)
T KOG2234|consen   98 PA-LIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLS  168 (345)
T ss_pred             HH-HHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCC
Confidence            33 234566678999999999999999999999999999999999999999999999999999999854443

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=95.96  E-value=0.037  Score=42.32  Aligned_cols=109  Identities=11%  Similarity=0.030  Sum_probs=74.0

Q ss_pred             HHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 018219          193 TSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWKLDWNVQFLTVMYCGVLNSALVYYLQTW  272 (359)
Q Consensus       193 ~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~  272 (359)
                      +.+++|+..+-+.|+..+..++.-.- . + ...-...    ++.             .|...+  .......+-..|++
T Consensus         3 ~Vg~~WG~Tnpfik~g~~~~~~~~~~-~-~-~~~~~~~----Ll~-------------n~~y~i--pf~lNq~GSv~f~~   60 (113)
T PF10639_consen    3 LVGILWGCTNPFIKRGSSGLEKVKAS-L-Q-LLQEIKF----LLL-------------NPKYII--PFLLNQSGSVLFFL   60 (113)
T ss_pred             eehHHhcCchHHHHHHHhhcCCccch-H-H-HHHHHHH----HHH-------------hHHHHH--HHHHHHHHHHHHHH
Confidence            45788999999999988865432221 1 2 1111111    110             111111  12223456677888


Q ss_pred             HHhccCcceeeech-hhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhhee
Q 018219          273 CISVKGPVFTAMFI-PVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCV  323 (359)
Q Consensus       273 a~~~~~~~~~s~~~-~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~  323 (359)
                      .+.+.+-+.+.++. .+.-+++++.++++.+|..+...++|+++++.|+.+.
T Consensus        61 ~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   61 LLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            89999999999985 9999999999987777778888999999999998764

Many members are annotated as potential transmembrane proteins.

>TIGR00803 nst UDP-galactose transporter

Probab=95.75  E-value=0.035  Score=48.31  Aligned_cols=58  Identities=16%  Similarity=0.007  Sum_probs=53.2

Q ss_pred             HHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHH
Q 018219           83 TIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSL  146 (359)
Q Consensus        83 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~  146 (359)
                      .....+....++|.+....+....+.++++.+++.++++|+++..+      ++|+.+.+.|+.
T Consensus       163 a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~------~~g~~lV~~~~~  220 (222)
T TIGR00803       163 VGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTF------YLGAILVFLATF  220 (222)
T ss_pred             HhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHH------HHHHHHHHeeeE
Confidence            6666778899999999999999999999999999999999999999      999999988864

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=95.35  E-value=0.16  Score=43.72  Aligned_cols=138  Identities=12%  Similarity=0.072  Sum_probs=96.6

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhcC-CChHHHHHHHHHHHHHHHHHHHhhhccCCCC-----CCCHHHHHHHHHHH
Q 018219            5 AYIPYMAIIFNQFAFAGSNILMKIALERG-LNQLVFVVYRHVIAMLLLGPFAYVLERKQRP-----KPSFAVMAKIFVLA   78 (359)
Q Consensus         5 ~~~~~~~~l~~~~~~g~~~~~~k~~~~~~-~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~g   78 (359)
                      ...|-++++++..+-|.+...-...-..+ -+.-.+.+...+-..+.+..-..+. ...|.     .-.+..|+-+...+
T Consensus       170 ~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfT-GElweF~yF~~RhP~~~~~l~l~a  248 (337)
T KOG1580|consen  170 FGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFT-GELWEFFYFVQRHPYVFWDLTLLA  248 (337)
T ss_pred             cchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheeh-hhHHHHHHHHHhccHHHHHHHHHH
Confidence            35677888888888888776654433211 2233333333344444332222111 11000     00235567778888


Q ss_pred             HHHHHHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhh
Q 018219           79 LLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTL  150 (359)
Q Consensus        79 ~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~  150 (359)
                      +.+ ++++.+.+.-..+-++-..+++..+--+|+.+.++++++..++.+|      |+|.++.+.|...=..
T Consensus       249 i~s-~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQ------wlgtvlVF~aL~~D~~  313 (337)
T KOG1580|consen  249 IAS-CLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQ------WLGTVLVFSALTADVV  313 (337)
T ss_pred             HHH-HhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHH------HHHHHHHHHHhhhHhh
Confidence            888 9999999999999999999999999999999999999999999999      9999999999877653

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=95.28  E-value=0.016  Score=48.22  Aligned_cols=64  Identities=13%  Similarity=0.255  Sum_probs=59.7

Q ss_pred             HHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeeeccC
Q 018219          265 LVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGKR  328 (359)
Q Consensus       265 ~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~  328 (359)
                      .++++|..|+++.+++.++.+...+..|..++++++++|+.....++..++.+.|++...+..+
T Consensus        65 ~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN  128 (290)
T KOG4314|consen   65 GANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADN  128 (290)
T ss_pred             cCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccc
Confidence            4678899999999999999999999999999999999999999999999999999999887544

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=93.98  E-value=0.51  Score=42.36  Aligned_cols=122  Identities=18%  Similarity=0.254  Sum_probs=85.7

Q ss_pred             HHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHhcC-CCc-ccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccCccee
Q 018219          205 QAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGR-NPT-IWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFT  282 (359)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~  282 (359)
                      .+...++++=|+.++......-.......-...+. .+. .-...+...+-.++-.| ++++.=..+-++++++++.+..
T Consensus        35 ~~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPta-lata~DIGLSN~sl~yVtlSlY  113 (349)
T KOG1443|consen   35 FKWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTA-LATALDIGLSNWSLEYVTLSLY  113 (349)
T ss_pred             hhhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhh-hhhhcccccccceeeeeeeeee
Confidence            34444455667777777776655554444333322 111 11222232333344444 5567777889999999999999


Q ss_pred             eechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeeecc
Q 018219          283 AMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGK  327 (359)
Q Consensus       283 s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~  327 (359)
                      ++.-...++|..+++.++-=|.+++.-..=..+|-+|+++..+..
T Consensus       114 TM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~Ks  158 (349)
T KOG1443|consen  114 TMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKS  158 (349)
T ss_pred             eeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecc
Confidence            999999999999999999999999999888899999999988654

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=93.43  E-value=1.3  Score=40.09  Aligned_cols=131  Identities=12%  Similarity=0.171  Sum_probs=84.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhCCCchhHHH--HHHHHHHHHHHHHHHHhcCCCcccccchhhHHHH--HHHHHHHHHH
Q 018219          189 ALILTSHIALSSWLILQAKVFKEYPAPLSMNT--LICFFASLQTSFLALFFGRNPTIWKLDWNVQFLT--VMYCGVLNSA  264 (359)
Q Consensus       189 ~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~~g~~~~~  264 (359)
                      ..++.-+++..+-.+..|.....++.|..+..  +|.+...+.....-...--+..+........|..  +++.+     
T Consensus        15 ~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~-----   89 (314)
T KOG1444|consen   15 LSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVG-----   89 (314)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHH-----
Confidence            34444444444555666777766665554444  7777766555443332111222333233333433  23333     


Q ss_pred             HHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeee
Q 018219          265 LVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLW  325 (359)
Q Consensus       265 ~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~  325 (359)
                       ....-..++++++.....++....|+...+.+..++|.+++...+.....+++|......
T Consensus        90 -~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~  149 (314)
T KOG1444|consen   90 -MLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAF  149 (314)
T ss_pred             -HHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhcc
Confidence             222345678999999999999999999999999999999999999999999999777653

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=93.04  E-value=0.19  Score=45.84  Aligned_cols=147  Identities=13%  Similarity=0.000  Sum_probs=87.7

Q ss_pred             chhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHH-hcC-CC-cccccchhhHHHHHHHHH
Q 018219          183 NWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALF-FGR-NP-TIWKLDWNVQFLTVMYCG  259 (359)
Q Consensus       183 ~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~-~~~~~~~~~~~~~l~~~g  259 (359)
                      +...|+++-.+++++.+.+.+=.||..+-  +-...-..+.+++ -+..|.... ..- +. .-....+...+....+.|
T Consensus         4 ~ii~Gii~h~iGg~~~~sfy~P~kkvk~W--sWEs~Wlv~gi~s-wli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G   80 (344)
T PF06379_consen    4 AIILGIIFHAIGGFASGSFYVPFKKVKGW--SWESYWLVQGIFS-WLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFG   80 (344)
T ss_pred             hHHHHHHHHHHHHHHhhhhccchhhcCCc--cHHHHHHHHHHHH-HHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHH
Confidence            35689999999999999999998886543  2112222233333 333333332 111 11 111222233555556666


Q ss_pred             HHHHHHHHHHHHHHHhccCcce-eeechhhHHHHHHHHHHHHhcC-------CCcchhhHhHHHHhhhhheeeeccCCCC
Q 018219          260 VLNSALVYYLQTWCISVKGPVF-TAMFIPVQLVIVALFSIIAFAE-------RLHLSSLIGAFFIVAGLYCVLWGKRKDS  331 (359)
Q Consensus       260 ~~~~~~~~~l~~~a~~~~~~~~-~s~~~~~~pv~a~l~~~~~~~e-------~~~~~~~~G~~li~~gv~l~~~~~~~~~  331 (359)
                      ++ =.++-..|-.++|+++.+. .++..-+.-+++.++--++.++       +-....++|.++.++|+.+..+....++
T Consensus        81 ~l-WGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke  159 (344)
T PF06379_consen   81 VL-WGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMKE  159 (344)
T ss_pred             HH-HhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhhh
Confidence            44 4567788889999998765 3444555556666665544332       2234678999999999999876654444


Q ss_pred             cc
Q 018219          332 LA  333 (359)
Q Consensus       332 ~~  333 (359)
                      ++
T Consensus       160 ~~  161 (344)
T PF06379_consen  160 KE  161 (344)
T ss_pred             hh
Confidence            33

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>KOG4831 consensus Unnamed protein [Function unknown]

Probab=92.41  E-value=2.3  Score=31.75  Aligned_cols=111  Identities=16%  Similarity=0.292  Sum_probs=70.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCC------hHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHH
Q 018219           11 AIIFNQFAFAGSNILMKIALERGLN------QLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATI   84 (359)
Q Consensus        11 ~~l~~~~~~g~~~~~~k~~~~~~~~------p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   84 (359)
                      -++...++||.+..+.|.... +++      .-...++|-.....                .+++++.. +.+   + -.
T Consensus         7 ~lvaVgllWG~Tnplirrgs~-g~~~v~~~~~k~~~~lqe~~tl~----------------l~w~Y~iP-Fll---N-qc   64 (125)
T KOG4831|consen    7 KLVAVGLLWGATNPLIRRGSL-GWDKVKSSSRKIMIALQEMKTLF----------------LNWEYLIP-FLL---N-QC   64 (125)
T ss_pred             HHHHHHHHHccccHHHHHHHh-hHhhccCchHHHHHHHHHHHHHH----------------HhHHHHHH-HHH---H-Hh
Confidence            467778999999999998654 232      12222222211100                11222222 222   3 44


Q ss_pred             HHHHHHHHhhccCchhhhhh-cchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHh
Q 018219           85 HINVYYIGMDYVSPTVATAL-GNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFT  149 (359)
Q Consensus        85 ~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~  149 (359)
                      +..+||.-+++.+.+.+..+ .++.-.|+.+.+..+ +|+..-+     +.++|..+.++|+.+.+
T Consensus        65 gSaly~~tLa~a~islavpv~nsltfafta~~G~~L-GE~~~g~-----~a~lGt~liv~Gi~Lci  124 (125)
T KOG4831|consen   65 GSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKAL-GEETQGG-----LALLGTSLIVFGIWLCI  124 (125)
T ss_pred             hHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHh-ccccccc-----eeehhhhHHhhhhhhee
Confidence            56677899999999999988 667778888888765 5544332     25999999999988764

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=91.11  E-value=0.41  Score=42.25  Aligned_cols=142  Identities=21%  Similarity=0.198  Sum_probs=100.8

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHhhhcc----CCCCC-CCHHHHHHHHHHH
Q 018219            5 AYIPYMAIIFNQFAFAGSNILMKIALER-GLNQLVFVVYRHVIAMLLLGPFAYVLER----KQRPK-PSFAVMAKIFVLA   78 (359)
Q Consensus         5 ~~~~~~~~l~~~~~~g~~~~~~k~~~~~-~~~p~~~~~~r~~~a~l~l~~~~~~~~~----~~~~~-~~~~~~~~~~~~g   78 (359)
                      ...|.++.+++.+.-+...+.+|..+.. +=--+.++++..+.+.++++|...+...    ...+. +..+.|..+.+.|
T Consensus       183 s~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsg  262 (347)
T KOG1442|consen  183 SWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSG  262 (347)
T ss_pred             chhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHH
Confidence            4689999999999999999999965542 1125778889999999999998776533    11122 2567777788888


Q ss_pred             HHHHHHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhcc
Q 018219           79 LLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRS  153 (359)
Q Consensus        79 ~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~  153 (359)
                      ++++.. ++...+=++-++|-.--+=...-...-.+++..+++|..+...      |-+-++.++|...-..-++
T Consensus       263 lfgF~m-gyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lw------wtsn~~vLvgs~~YT~vk~  330 (347)
T KOG1442|consen  263 LFGFAM-GYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLW------WTSNIVVLVGSLAYTLVKE  330 (347)
T ss_pred             HHHHHh-hheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhhe------eeeeEEEEehhHHHHHHHH
Confidence            888333 3333333444555444444445556678899999999999988      9999999999887765443

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=90.83  E-value=1.4  Score=37.79  Aligned_cols=135  Identities=13%  Similarity=0.192  Sum_probs=99.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHh-cCCChHHHHHHHHHHHHHHHHHHHhhhccCCCC----CCCHHHHHHHHHHHHHHHH
Q 018219            9 YMAIIFNQFAFAGSNILMKIALE-RGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRP----KPSFAVMAKIFVLALLGAT   83 (359)
Q Consensus         9 ~~~~l~~~~~~g~~~~~~k~~~~-~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~   83 (359)
                      ++.+....+.-+......|.-.+ .+..-++..++..+++..++..+....+.+...    .++.......++.|++. +
T Consensus       157 Y~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~s-v  235 (309)
T COG5070         157 YLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCS-V  235 (309)
T ss_pred             eEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHH-h
Confidence            33333444433444444444332 236678889999999999998887776543322    23455666778888888 7


Q ss_pred             HHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhh
Q 018219           84 IHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTL  150 (359)
Q Consensus        84 ~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~  150 (359)
                      .-.++.-+.++-++.+..++...+.-.-.++-+.++++|+.+...      +.++.+++...++-..
T Consensus       236 giSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~s------i~sillGflsg~iYav  296 (309)
T COG5070         236 GISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLS------IFSILLGFLSGAIYAV  296 (309)
T ss_pred             hhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHH------HHHHHHHHHHHHHHHH
Confidence            778888889999999999999999888899999999999999998      9999998887776653

>PRK02237 hypothetical protein; Provisional

Probab=90.44  E-value=0.98  Score=33.91  Aligned_cols=47  Identities=19%  Similarity=0.201  Sum_probs=39.2

Q ss_pred             eeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeeeccC
Q 018219          282 TAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGKR  328 (359)
Q Consensus       282 ~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~  328 (359)
                      .+.+.-.-.+.++++++.+-|++|+.+.++|..++++|+.++.+..|
T Consensus        62 YAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~pR  108 (109)
T PRK02237         62 YAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAPR  108 (109)
T ss_pred             HHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecCC
Confidence            34455566778889999999999999999999999999988876544

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=89.30  E-value=0.18  Score=44.03  Aligned_cols=139  Identities=14%  Similarity=0.135  Sum_probs=100.0

Q ss_pred             chhhhHHHHHHHHHHHHHHHHHHHHHhhh-CCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHH
Q 018219          183 NWIKGSALILTSHIALSSWLILQAKVFKE-YPAPLSMNTLICFFASLQTSFLALFFGRNPTIWKLDWNVQFLTVMYCGVL  261 (359)
Q Consensus       183 ~~~~G~~l~l~a~~~~a~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~  261 (359)
                      +.++|..++-.-.+|-......+..+.++ ...|...++.....-+++-.++..+..   ....    ..|---++++ +
T Consensus        15 k~li~~~LGQiLSL~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~---~~~~----~~~~hYilla-~   86 (336)
T KOG2766|consen   15 KTLIGLGLGQILSLLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRR---KYIK----AKWRHYILLA-F   86 (336)
T ss_pred             hhhheeeHHHHHHHHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhh---HHHH----HHHHHhhhee-E
Confidence            34455555555555555555566666655 346777777777776777777776532   1111    1344455555 4


Q ss_pred             HHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeeeccCC
Q 018219          262 NSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGKRK  329 (359)
Q Consensus       262 ~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~~  329 (359)
                      ..+=++++...|.|+++-+.+..+..-..+...++++++++.+..+.++.|.++.++|+.+.......
T Consensus        87 ~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~  154 (336)
T KOG2766|consen   87 VDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVH  154 (336)
T ss_pred             EeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeec
Confidence            45678888889999999999999888888899999999999999999999999999999998876543

>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function

Probab=87.63  E-value=0.74  Score=34.47  Aligned_cols=44  Identities=23%  Similarity=0.276  Sum_probs=37.2

Q ss_pred             chhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeeeccC
Q 018219          285 FIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGKR  328 (359)
Q Consensus       285 ~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~  328 (359)
                      +.-.-.+.++++++.+-+++|+.+.++|..++++|+.++.+.+|
T Consensus        63 YGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~PR  106 (107)
T PF02694_consen   63 YGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAPR  106 (107)
T ss_pred             hhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecCC
Confidence            34445567889999999999999999999999999999887654

; GO: 0016020 membrane

>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine

Probab=86.46  E-value=1.1  Score=40.34  Aligned_cols=130  Identities=10%  Similarity=0.050  Sum_probs=77.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhcc--C----CCC-------CCCHHHHHHHHHHH
Q 018219           12 IIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLER--K----QRP-------KPSFAVMAKIFVLA   78 (359)
Q Consensus        12 ~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~--~----~~~-------~~~~~~~~~~~~~g   78 (359)
                      |+++.+|||+.+...|++.++ -...+...+-+.++.++..++..+...  .    ..|       +-+++.....+.-|
T Consensus         1 M~itmlcwGSW~nt~kL~~r~-gR~~qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aGG   79 (336)
T PF07168_consen    1 MVITMLCWGSWPNTQKLAERR-GRLPQHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAGG   79 (336)
T ss_pred             CeeehhhhcChHHHHHHHHhc-CCccceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHhh
Confidence            356789999999999987664 444456777777776665555433211  1    111       12445555555555


Q ss_pred             HHHHHHHHHHHHHHhhccCchhhhhh-cchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHH
Q 018219           79 LLGATIHINVYYIGMDYVSPTVATAL-GNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLF  148 (359)
Q Consensus        79 ~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~  148 (359)
                      ++. .+++.+..+|+.+...+.+-++ .++.-+.-+++-+ ++..|.++..    .-..|+.+.++.+++=
T Consensus        80 vvf-nlgNillq~aia~aGmSVafpvg~glalVlGv~~NY-fld~~~n~a~----iLF~GV~cf~iAI~lg  144 (336)
T PF07168_consen   80 VVF-NLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNY-FLDPKINRAE----ILFPGVACFLIAIILG  144 (336)
T ss_pred             Hhh-hhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeee-eccCCCCCce----EEEccHHHHHHHHHHH
Confidence            555 8999999999999998888877 3443333444433 3344444321    1144666655555543

Transport is dependent on glucose and a proton gradient [].

>COG1742 Uncharacterized conserved protein [Function unknown]

Probab=85.66  E-value=3.5  Score=30.72  Aligned_cols=47  Identities=23%  Similarity=0.265  Sum_probs=39.4

Q ss_pred             eeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeeeccC
Q 018219          282 TAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGKR  328 (359)
Q Consensus       282 ~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~  328 (359)
                      .+.+.-.-.+.++++.+.+-+.+|+.+.++|..+.++|+.++....+
T Consensus        61 YAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~pR  107 (109)
T COG1742          61 YAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFGPR  107 (109)
T ss_pred             HHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeCCC
Confidence            34555666788899999999999999999999999999888877644

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=85.61  E-value=1.4  Score=39.18  Aligned_cols=66  Identities=18%  Similarity=0.164  Sum_probs=57.3

Q ss_pred             HHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeeec
Q 018219          261 LNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWG  326 (359)
Q Consensus       261 ~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~  326 (359)
                      ++-..+-.+.+.++..++++...++.-...+|+-+++.-+++.+++..||.|+..+.+|+..+-..
T Consensus        94 l~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~  159 (372)
T KOG3912|consen   94 LCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSL  159 (372)
T ss_pred             HHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeee
Confidence            445566667777888888888888888899999999999999999999999999999999888654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	359
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.3 bits (101), Expect = 1e-04
 Identities = 37/315 (11%), Positives = 87/315 (27%), Gaps = 106/315 (33%)

Query: 13  IFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGP---------FAYVLERKQR 63
            +N F      IL+    ++  + L      H+                     L+ + +
Sbjct: 258 AWNAFNL-SCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQ 316

Query: 64  PKPSFAVMAKIFVLALLGATIHINV----YY--IGMDYVSPTVATALGNVVPS-----FT 112
             P   +      L+++  +I   +     +  +  D ++  + ++L  + P+     F 
Sbjct: 317 DLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFD 376

Query: 113 FLLAFLLGMEKVKITSGRGRAKVLGTI--------------ICVGGSLLFTLWRSGYLF- 157
            L  F        I +      +L  I                   SL+    +   +  
Sbjct: 377 RLSVF---PPSAHIPT-----ILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISI 428

Query: 158 -------------KSVVEKPLINIYN------------NNAD-----HLRHHGKE----- 182
                        +  + + +++ YN               D     H+ HH K      
Sbjct: 429 PSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPE 488

Query: 183 ------------NWIK------GSALILTSHIALSSWLILQAKVFKEY-----PAPLSM- 218
                        +++       +A   +  I      + Q K +K Y     P    + 
Sbjct: 489 RMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILN---TLQQLKFYKPYICDNDPKYERLV 545

Query: 219 NTLICFFASLQTSFL 233
           N ++ F   ++ + +
Sbjct: 546 NAILDFLPKIEENLI 560

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	359
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	99.08
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.63
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.6
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.6

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=99.08  E-value=6.2e-11  Score=93.35  Aligned_cols=71  Identities=20%  Similarity=0.291  Sum_probs=54.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhccCcceeeec-hhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeeecc
Q 018219          257 YCGVLNSALVYYLQTWCISVKGPVFTAMF-IPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGK  327 (359)
Q Consensus       257 ~~g~~~~~~~~~l~~~a~~~~~~~~~s~~-~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~  327 (359)
                      .++++++++++.++.+++++.+++.+..+ ..+.|+++.+++++++||++++.+++|+++|++|+++....+
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            35667889999999999999999999998 899999999999999999999999999999999999987544

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.63  E-value=3.8e-07  Score=69.10  Aligned_cols=69  Identities=16%  Similarity=0.281  Sum_probs=63.7

Q ss_pred             HHHHHHHHHHHHHHHHHhhccCchhhhhh-cchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhh
Q 018219           76 VLALLGATIHINVYYIGMDYVSPTVATAL-GNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTL  150 (359)
Q Consensus        76 ~~g~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~  150 (359)
                      +.+.+...+++.++..++++.|.+.+..+ ..+.|+++++++++++||++++.+      ++|+.+.++|++++..
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~------~~Gi~lIi~Gv~~l~~  103 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPA------IIGMMLICAGVLIINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHHhc
Confidence            46666668999999999999999999999 899999999999999999999999      9999999999999864

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.60  E-value=7.2e-08  Score=75.79  Aligned_cols=70  Identities=16%  Similarity=0.274  Sum_probs=53.9

Q ss_pred             HHHHHHHHHHHHHHHHHhhccCchhhhhh-cchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhh
Q 018219           76 VLALLGATIHINVYYIGMDYVSPTVATAL-GNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLW  151 (359)
Q Consensus        76 ~~g~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~  151 (359)
                      +.+++...+++.++..++++.|++.+..+ .++.|++++++++++++|++++.+      ++|+++.++|++++...
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~------~~Gi~LIi~GV~ll~~~  104 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPA------IIGMMLICAGVLIINLL  104 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------C------HHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHHhcC
Confidence            46666669999999999999999999999 899999999999999999999999      99999999999999753

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.60  E-value=6.2e-08  Score=73.50  Aligned_cols=69  Identities=20%  Similarity=0.304  Sum_probs=63.6

Q ss_pred             HHHHHHHHHHHHHHHHHhccCcceeeec-hhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeeec
Q 018219          258 CGVLNSALVYYLQTWCISVKGPVFTAMF-IPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWG  326 (359)
Q Consensus       258 ~g~~~~~~~~~l~~~a~~~~~~~~~s~~-~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~  326 (359)
                      .++++.++++.++.+++|+.+.+.+..+ ..+.|+++.+++++++||++++.+++|+.+|++|+++....
T Consensus        35 ~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~  104 (110)
T 3b5d_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            4556778999999999999999999888 89999999999999999999999999999999999988654

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00