Citrus Sinensis ID: 018256

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------36
Protein Sequence
MGASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQAKEEKMDEDHTEISGFKPSSPCVPLLINKSNTEDSRATFASG
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHccHHHHccccccHHHHHHHHcccHHHHHHHHHHHHHHcccccccccccEEEccEEEEEEEEEEEEcccccccccccccccccccccccccccEEHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHcccccHHHHHHHHHHHcccccEEEEccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHEEcccccccccccccccccccccccccccccccccccccHHccccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHEEEHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccHEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHccccccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
MGASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLvpssfifyrkrtppqltwSIVCRIFLLGLLSCCGQMFhyfgiengspaLASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYkglpitsapsknKLINELvqlplsnwtiGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVaeknpnawrlrpdieLMAIGYSAIFAVSVRSVFHTwalrkkgpvyvsMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQakeekmdedhteisgfkpsspcvpllinksntedsratfasg
Flexible Loop (DISEMBL)
MGASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQAKEEKMDEDHTEIsgfkpsspcvpllinksntedsratfasg
Low Complexity Region (SEG)
MGASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQAKEEKMDEDHTEISGFKPSSPCVPLLINKSNTEDSRATFASG
Disordered region (IsUnstruct)
*****TAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQ******************************************
Disordered Region (DISOPRED)
**ASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSA*****************WTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIW********************************************
Disordered Region (DISEMBL)
MGASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQAK************GFKPSSPCVPLLINKSNT**********
Disordered Region (DISPRO)
*GASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPS*************SNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQA*****************************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQAKEEKMDEDHTEISGFKPSSPCVPLLINKSNTEDSRATFASG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	359	2.2.26 [Sep-21-2011]
Q94JU2	367	WAT1-related protein At3g	yes	no	0.949	0.929	0.441	3e-72
Q945L4	339	WAT1-related protein At5g	no	no	0.894	0.946	0.444	3e-70
Q9FL08	368	WAT1-related protein At5g	no	no	0.883	0.861	0.425	2e-67
F4KHA8	370	WAT1-related protein At5g	no	no	0.916	0.889	0.420	1e-66
F4JK59	347	WAT1-related protein At4g	no	no	0.852	0.881	0.420	7e-58
Q9LRS5	353	WAT1-related protein At3g	no	no	0.922	0.937	0.425	2e-57
Q56X95	355	WAT1-related protein At3g	no	no	0.885	0.895	0.411	6e-56
Q8VYZ7	360	WAT1-related protein At3g	no	no	0.933	0.930	0.413	2e-55
Q9FL41	402	WAT1-related protein At5g	no	no	0.869	0.776	0.362	3e-52
F4IYZ0	358	WAT1-related protein At3g	no	no	0.935	0.938	0.390	3e-51

>sp|Q94JU2|WTR18_ARATH WAT1-related protein At3g28050 OS=Arabidopsis thaliana GN=At3g28050 PE=2 SV=1

 Score =  272 bits (696), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 156/353 (44%), Positives = 218/353 (61%), Gaps = 12/353 (3%)

Query: 8   AMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWS 67
           A+V +E  +VGLNT+ KAA  +G S  + +VYS  LA  LL+PS F  +R RT P + +S
Sbjct: 15  ALVIMECANVGLNTLFKAATLKGMSFHVFIVYSYGLAALLLLPSLFCSFRSRTLPPMNFS 74

Query: 68  IVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQS 127
           I+ +I LLG++ CC  +  Y GI   SP LASA+ +LTP FTF+LA++FRME +  +  S
Sbjct: 75  ILYKIVLLGIIGCCSNIMGYTGINYSSPTLASAISNLTPAFTFLLAVVFRMESVSFKRTS 134

Query: 128 SQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVI 187
           S AK  GTV+ IGGA IVTLY G P+  A S    ++   Q    NW +G  FLA     
Sbjct: 135 SVAKMLGTVVSIGGAFIVTLYNG-PVVIAKSPPS-VSLRSQSTNPNWILGAGFLAVEYFC 192

Query: 188 LAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNP-NAWRLRPDIELMAIG 246
           + ++YIVQ  I+R+YPAE  V    SI V+  ++ V+L  E N   AW+++P+I L++I 
Sbjct: 193 VPLWYIVQTQIMREYPAEFTVVCFYSIGVSFWTALVTLFTEGNDLGAWKIKPNIALVSIV 252

Query: 247 YSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATI 306
            S +F   + +  HTWALR KGP++V+MFKPL + +A+  G+ FL D+LY+GS +GA  I
Sbjct: 253 CSGLFGSCINNTIHTWALRIKGPLFVAMFKPLSIAIAVAMGVIFLRDSLYIGSLIGATVI 312

Query: 307 ALGFYAVIWGQAKEEKMDED-----HTEISGFKPSSPC----VPLLINKSNTE 350
            +GFY V+WG+AKE  + ED     H E +     SP      PLL +  N E
Sbjct: 313 TIGFYTVMWGKAKEVALVEDDNKANHEEANEADLDSPSGSQKAPLLESYKNDE 365

Arabidopsis thaliana (taxid: 3702)

>sp|Q945L4|WTR40_ARATH WAT1-related protein At5g40210 OS=Arabidopsis thaliana GN=At5g40210 PE=2 SV=1

 Score =  265 bits (678), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 153/344 (44%), Positives = 221/344 (64%), Gaps = 23/344 (6%)

Query: 5   VTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQL 64
           +  AMV  EF +VG+NT+ KAA S+G S F+++VYS T    LL+P +F  +R R+ P L
Sbjct: 13  ILTAMVVTEFSNVGVNTLVKAATSKGLSPFVVLVYSYTFGSLLLLPLTFFSFRSRSLPPL 72

Query: 65  TWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELR 124
           T+SI+C + +LGL++   Q+  Y GI+  SP L+SAM ++ P FTFILA++FRME + L 
Sbjct: 73  TFSILCNMGILGLIASAFQILGYNGIKYSSPTLSSAMSNVNPAFTFILAVVFRMENISLG 132

Query: 125 VQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAH 184
            +SS AK  GT+L I GAL+VTLY G  + S+               S+W IGG  LA  
Sbjct: 133 KKSSVAKVLGTILSIIGALVVTLYHGPMLMSSH--------------SDWIIGGGLLALQ 178

Query: 185 SVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEK-NPNAWRLRPDIELM 243
            +++++ Y+V A  +  YP+ ++VTL+ ++ + ++ + VSL+AEK NP AW +R DI L+
Sbjct: 179 YILVSVSYLVMAHTMGRYPSAVVVTLVHNVCIAVVCAFVSLLAEKDNPKAWVIRFDITLI 238

Query: 244 AIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGA 303
            +  + I   S   V HTWA+  KGPVY+SMFKPL +++A V    FLG++LYLGS +G 
Sbjct: 239 TVVATGILN-SGYYVIHTWAVSHKGPVYLSMFKPLSILIAAVSTFIFLGESLYLGSVMGG 297

Query: 304 ATIALGFYAVIWGQAKEEKMDEDHTEISGFKPSSPC--VPLLIN 345
             I++GFY V+WG+AKE+K+D     I G   SSP    PLL N
Sbjct: 298 ILISIGFYMVLWGKAKEDKVD-----IIGAIESSPSHNAPLLDN 336

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FL08|WTR42_ARATH WAT1-related protein At5g40240 OS=Arabidopsis thaliana GN=At5g40240 PE=2 SV=1

 Score =  256 bits (655), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 138/324 (42%), Positives = 201/324 (62%), Gaps = 7/324 (2%)

Query: 7   AAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTW 66
           AAM  +E   VG NT+ KAA  RG S ++ V YS  ++  LL+P S IF R R  P    
Sbjct: 22  AAMFAVECATVGSNTLFKAATLRGLSFYVFVFYSYIVSTLLLLPLSVIFGRSRRLPAAKS 81

Query: 67  SIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQ 126
            +  +IFLLGL+    Q+    GI   SP LASA+ +LTP FTF LA+IFRME++ LR  
Sbjct: 82  PLFFKIFLLGLVGFMSQIAGCKGIAYSSPTLASAISNLTPAFTFTLAVIFRMEQVRLRSS 141

Query: 127 SSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLI------NELVQLPLSNWTIGGIF 180
           ++QAK  G +L I GAL+V LYKG  + ++ S   ++       +L  +  S+W IGG+ 
Sbjct: 142 ATQAKIIGAILSISGALVVVLYKGPQVLASASFTTVLPTVTLHQQLTSIE-SSWIIGGLL 200

Query: 181 LAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDI 240
           LA+   +++++YI+Q  ++  YP E+ V    ++F T++S  V L AE N  +W L+PDI
Sbjct: 201 LASQYFLISVWYILQTRVMEVYPEEITVVFFYNLFATLISVPVCLFAESNLTSWVLKPDI 260

Query: 241 ELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSF 300
            L AI YS +F     ++ HTW L  KGPVY+S+F+PL + +A+  G  FLGD L+LGS 
Sbjct: 261 SLAAIIYSGVFVSLFSALTHTWGLHLKGPVYISLFRPLSIAIAVAMGAIFLGDALHLGSV 320

Query: 301 VGAATIALGFYAVIWGQAKEEKMD 324
           +G+  + +GFY VIWG+A+E+ + 
Sbjct: 321 IGSMILCIGFYTVIWGKAREDTIK 344

Arabidopsis thaliana (taxid: 3702)

>sp|F4KHA8|WTR41_ARATH WAT1-related protein At5g40230 OS=Arabidopsis thaliana GN=At5g40230 PE=2 SV=1

 Score =  253 bits (647), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 141/335 (42%), Positives = 208/335 (62%), Gaps = 6/335 (1%)

Query: 8   AMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWS 67
           AMV +E + VG NT+ KAA  RG S ++ V Y+  +A  +L+P S IF R +  P     
Sbjct: 24  AMVAVECVTVGSNTLFKAATLRGLSFYVFVFYTYVVATLVLLPLSLIFGRSKRLPSAKTP 83

Query: 68  IVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQS 127
           +   IFLL L+     +    GIE  SP LASA+ +LTP FTF LA+IFRME++ LR  +
Sbjct: 84  VFFNIFLLALVGFMSLIVGCKGIEYSSPTLASAISNLTPAFTFTLAVIFRMEQIVLRSSA 143

Query: 128 SQAKSFGTVLLIGGALIVTLYKGLPITS-----APSKNKLINELVQLPLSNWTIGGIFLA 182
           +QAK  GT++ I GAL+V LYKG  + +      PS    + + +    S+W IGG+ LA
Sbjct: 144 TQAKIIGTIVSISGALVVILYKGPKVLTDASLTPPSPTISLYQHLTSFDSSWIIGGLLLA 203

Query: 183 AHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIEL 242
              ++++++YI+Q  ++  YP E+ V  + ++  T++S+ V L AEK+ N++ L+P + L
Sbjct: 204 TQYLLVSVWYILQTRVMELYPEEITVVFLYNLCATLISAPVCLFAEKDLNSFILKPGVSL 263

Query: 243 MAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVG 302
            ++ YS     S  SV HTW L  KGPVY+S+FKPL +V+A+  G+ FLGD LYLGS +G
Sbjct: 264 ASVMYSGGLVSSFGSVIHTWGLHLKGPVYISLFKPLSIVIAVAMGVMFLGDALYLGSVIG 323

Query: 303 AATIALGFYAVIWGQAKEEKMDE-DHTEISGFKPS 336
           +  ++LGFY VIWG+A+E+ +     TE S   PS
Sbjct: 324 SLILSLGFYTVIWGKAREDSIKTVAGTEQSPLLPS 358

Arabidopsis thaliana (taxid: 3702)

>sp|F4JK59|WTR33_ARATH WAT1-related protein At4g15540 OS=Arabidopsis thaliana GN=At4g15540 PE=2 SV=1

 Score =  224 bits (571), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 132/314 (42%), Positives = 195/314 (62%), Gaps = 8/314 (2%)

Query: 8   AMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWS 67
           AM+ +E   VG + + KAA  RG S ++ V Y+   A  +L+  S IF R R+ P    S
Sbjct: 20  AMIAIECTTVGSSILYKAATLRGFSFYVFVFYAYVGATLVLLLLSLIFGRSRSLPTAKSS 79

Query: 68  IVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQS 127
           +  +IFLL LL    ++    GIE  SP L+SA+ +LTP FTFILAI FRME++ LR  +
Sbjct: 80  LFFKIFLLALLGLTSRVAGCKGIEYSSPTLSSAISNLTPAFTFILAIFFRMEQVMLRSSA 139

Query: 128 SQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVI 187
           +QAK  GT++ I GAL++ LYKG  +  A S             S+W IGG+ L    ++
Sbjct: 140 TQAKIIGTIVSISGALVIVLYKGPKLLVAASFTSF--------ESSWIIGGLLLGLQFLL 191

Query: 188 LAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGY 247
           L++++I+Q  I+  YP E+ V    ++  T++S  V L+ EK+ N+W+L+P   L ++ Y
Sbjct: 192 LSVWFILQTHIMEIYPEEIAVVFCYNLCATLISGTVCLLVEKDLNSWQLKPGFSLASVIY 251

Query: 248 SAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIA 307
           S +F  S+ SV HTW L  KGPVY+S+FKPL + +A+     FLGDTL+LGS +G+  ++
Sbjct: 252 SGLFDTSLGSVIHTWGLHVKGPVYISLFKPLSIAIAVAMAAIFLGDTLHLGSVIGSVILS 311

Query: 308 LGFYAVIWGQAKEE 321
            GFY VIWG+A+E+
Sbjct: 312 FGFYTVIWGKARED 325

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LRS5|WTR22_ARATH WAT1-related protein At3g28100 OS=Arabidopsis thaliana GN=At3g28100 PE=2 SV=1

 Score =  223 bits (567), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 146/343 (42%), Positives = 212/343 (61%), Gaps = 12/343 (3%)

Query: 8   AMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWS 67
           AM+  E   VG++T+ K A S+G + +  + YS  LA  LL+PS F   R R+ P L+ S
Sbjct: 17  AMLATETGVVGISTLFKVATSKGLNLYAFLGYSYLLASLLLLPSLFFTDRSRSLPPLSLS 76

Query: 68  IVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQS 127
           I+ +I LLGLL     +  Y GIE  SP LASA+ ++TP  TFILAIIFRMEK+  + +S
Sbjct: 77  ILSKIGLLGLLGSMYVITGYIGIEYSSPTLASAISNITPALTFILAIIFRMEKVSFKERS 136

Query: 128 SQAKSFGTVLLIGGALIVTLYKGLPI---TSAPSKN-KLINELVQLPLSNWTIGGIFLAA 183
           S AK  GT+L + GAL+V LY G  +   +S P  N + ++  +    S+W IGG  L  
Sbjct: 137 SVAKVMGTILSLIGALVVVLYHGPRVFVASSPPYINFRQLSPPLSSSNSDWLIGGALLTI 196

Query: 184 HSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEK-NPNAWRLRPDIEL 242
             + +++ +I+QA I+  YPA   V+ +  + V+I++S + LV EK NP+ W +R DI L
Sbjct: 197 RDIFVSVSFILQAKIMSTYPAAFTVSFLYIVSVSIVTSMIGLVVEKNNPSVWIIRFDITL 256

Query: 243 MAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVG 302
           + I   AI   SV  V H+W +R KGP+Y+++FKPL +++A+V    FL D+LYLG  +G
Sbjct: 257 ITIVTMAIIT-SVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMSAVFLNDSLYLGCLIG 315

Query: 303 AATIALGFYAVIWGQAKEEKMDEDHTEISGFKPSSPCVPLLIN 345
              I LGFYAV+WG+A EEK  +    +SG + +    PLL+N
Sbjct: 316 GLLITLGFYAVMWGKANEEK--DQLLLVSGKERT----PLLLN 352

Arabidopsis thaliana (taxid: 3702)

>sp|Q56X95|WTR23_ARATH WAT1-related protein At3g28130 OS=Arabidopsis thaliana GN=At3g28130 PE=2 SV=1

 Score =  218 bits (555), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 134/326 (41%), Positives = 201/326 (61%), Gaps = 8/326 (2%)

Query: 3   ASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPP 62
           A +  AM+  E  +V +NT+ KAA S+G + +  ++YS  +   +L+PS    YR R+ P
Sbjct: 11  AVLLTAMLATETGNVAMNTLFKAATSKGLNSYTFLIYSYLIGSIVLLPSHIFSYRSRSLP 70

Query: 63  QLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLE 122
            L+ SI+C+I +LGLL     +  + GIE  +P LASA+ ++ P  TFILAIIFRMEK  
Sbjct: 71  SLSLSILCKIGVLGLLGSTYLITGFIGIEYSNPTLASAISNINPAITFILAIIFRMEKAS 130

Query: 123 LRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPS-----KNKLINELVQLPLSNWTIG 177
            + +SS AK  GT++ + GAL+V LY G P    PS     + + +   +    S+W IG
Sbjct: 131 FKEKSSVAKMVGTIVSLVGALVVVLYHG-PRVFTPSSPPFPQLRQLLLPLSSSNSDWIIG 189

Query: 178 GIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEK-NPNAWRL 236
           G  LA    ++ + +I+QA I++ YPA   V+    +  +IL+S + +VAEK NP+ W +
Sbjct: 190 GCLLAIKDTLVPVAFILQAHIMKLYPAPFTVSFFYFLIASILTSLIGIVAEKNNPSIWII 249

Query: 237 RPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLY 296
             DI L+ I    IF     ++ H WA+R KGPVY+++F+PL +++A++ G  FLGD+ Y
Sbjct: 250 HFDITLVCIVVGGIFNPGYYAI-HLWAVRNKGPVYLAIFRPLSILIAVIMGAIFLGDSFY 308

Query: 297 LGSFVGAATIALGFYAVIWGQAKEEK 322
           LGS VG   I+LGFY V+WG+AKE K
Sbjct: 309 LGSLVGGILISLGFYTVMWGKAKEGK 334

Arabidopsis thaliana (taxid: 3702)

>sp|Q8VYZ7|WTR20_ARATH WAT1-related protein At3g28070 OS=Arabidopsis thaliana GN=At3g28070 PE=2 SV=1

 Score =  216 bits (550), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 144/348 (41%), Positives = 207/348 (59%), Gaps = 13/348 (3%)

Query: 8   AMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWS 67
           AM+ +E   VG++T+ K A S+G + +  + YS  LA  LL+PS F   R  + P L+ S
Sbjct: 20  AMLVVETSVVGISTLFKFATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSSSLPPLSVS 79

Query: 68  IVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQS 127
           I+ +I LLG L     +  Y GIE  SP LASA+ ++TP  TFILAIIFRMEK+  + +S
Sbjct: 80  ILSKIGLLGFLGSMYVITGYIGIEYSSPTLASAINNITPALTFILAIIFRMEKVSFKERS 139

Query: 128 SQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPL----SNWTIGGIFLAA 183
           S AK  GT+L + GAL+V  Y G  +  A S   +       PL    S+W IGG  L  
Sbjct: 140 SLAKLMGTILSLIGALVVIFYHGPRVFLASSPPYVNFRQFSPPLSSSNSDWLIGGALLTM 199

Query: 184 HSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEK-NPNAWRLRPDIEL 242
             + +++ +I+QA I+  YPA   V+ + ++ V+I++S + LV EK NP+ W +  DI L
Sbjct: 200 QGIFVSVSFILQAHIMSVYPAAFRVSFLYTVCVSIVTSTIGLVVEKNNPSVWIIHFDITL 259

Query: 243 MAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVG 302
           + I   AI   SV  V H+W +R KGP+Y+++FKPL +++A+V G  FL D+LYLG  +G
Sbjct: 260 ITIVTMAI-VTSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIG 318

Query: 303 AATIALGFYAVIWGQAKEEKMDEDHTEISGFKPSSPCVPLLINKSNTE 350
              I LGFYAV+WG+A EEK     +E           PLL+N+ N +
Sbjct: 319 GILITLGFYAVMWGKANEEKDQLSFSE-------KEKTPLLLNRKNDQ 359

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FL41|WTR38_ARATH WAT1-related protein At5g07050 OS=Arabidopsis thaliana GN=At5g07050 PE=2 SV=1

 Score =  206 bits (523), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 119/328 (36%), Positives = 191/328 (58%), Gaps = 16/328 (4%)

Query: 8   AMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWS 67
           AM++L+F   G+N +TK +++ G SH++LVVY + +A  ++ P +F F+ ++  P++T+S
Sbjct: 21  AMISLQFGYAGMNIITKISLNTGMSHYVLVVYRHAIATAVIAPFAF-FFERKAQPKITFS 79

Query: 68  IVCRIFLLGLLS-CCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQ 126
           I  ++F+LGLL     Q F+Y G++  SP  + AM ++ P  TFILA++FRME L+L+  
Sbjct: 80  IFMQLFILGLLGPVIDQNFYYMGLKYTSPTFSCAMSNMLPAMTFILAVLFRMEMLDLKKL 139

Query: 127 SSQAKSFGTVLLIGGALIVTLYKGLPIT----------SAPSKNKLINELVQLPLSNWTI 176
             QAK  GTV+ + GA+++T+YKG PI              S     +         +  
Sbjct: 140 WCQAKIAGTVVTVAGAMLMTIYKG-PIVELFWTKYMHIQDSSHANTTSSKNSSSDKEFLK 198

Query: 177 GGIFLAAHSVILAIYYIVQAWIVRDYPAELM--VTLICSIFVTILSSAVSLVAEKNPNAW 234
           G I L   ++  A  +++QA I++ Y    +   TLIC I  T+ + AV+ V E NP+AW
Sbjct: 199 GSILLIFATLAWASLFVLQAKILKTYAKHQLSLTTLICFI-GTLQAVAVTFVMEHNPSAW 257

Query: 235 RLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDT 294
           R+  D+ L+A  YS I A S+        ++K+GPV+ + F PL MV+  V G   L + 
Sbjct: 258 RIGWDMNLLAAAYSGIVASSISYYVQGIVMKKRGPVFATAFSPLMMVIVAVMGSFVLAEK 317

Query: 295 LYLGSFVGAATIALGFYAVIWGQAKEEK 322
           ++LG  +GA  I +G YAV+WG+ KE +
Sbjct: 318 IFLGGVIGAVLIVIGLYAVLWGKQKENQ 345

Arabidopsis thaliana (taxid: 3702)

>sp|F4IYZ0|WTR21_ARATH WAT1-related protein At3g28080 OS=Arabidopsis thaliana GN=At3g28080 PE=2 SV=1

 Score =  202 bits (514), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 136/348 (39%), Positives = 206/348 (59%), Gaps = 12/348 (3%)

Query: 8   AMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWS 67
           AM+  E   VGL+T+ K A S+G + +  + YS  LA  LL+PS F   R R+ P L+ S
Sbjct: 17  AMLAGETSIVGLSTLFKVATSKGLNIYPFLSYSYLLASLLLLPSLFFTNRSRSLPPLSAS 76

Query: 68  IVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQS 127
           I+ +I LLG L     +    GIE  +P LASA+ ++ P  TFILA+IFRMEK+  + +S
Sbjct: 77  ILSKIGLLGFLGSMYVITGGIGIEYSNPTLASAIGNIVPALTFILAVIFRMEKVSFKERS 136

Query: 128 SQAKSFGTVLLIGGALIVTLYKGLPI---TSAPSKN-KLINELVQLPLSNWTIGGIFLAA 183
           S AK  GT+L + GA +V  Y G  +   +S P  N + ++  +    S+W IGG  L  
Sbjct: 137 SVAKVMGTILSLIGAFVVIFYHGPRVFVASSPPYLNFRQLSPPLSSSKSDWLIGGAILTI 196

Query: 184 HSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEK-NPNAWRLRPDIEL 242
             + +++ +I+Q  I+R+YP    V+++  + ++I++S + LV EK NP+ W +  DI L
Sbjct: 197 QGIFVSVSFILQTHIMREYPEAFTVSILYILCISIVTSMIGLVVEKNNPSIWIIHFDITL 256

Query: 243 MAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVG 302
             I  + I   SV  V H+WA+R K P+Y+++FKPL +++A+V G  FL D+LYLG  +G
Sbjct: 257 FTIVTTGIIT-SVYYVIHSWAIRHKRPLYLAIFKPLSILIAVVMGTIFLNDSLYLGCLIG 315

Query: 303 AATIALGFYAVIWGQAKEEKMDEDHTEISGFKPSSPCVPLLINKSNTE 350
              I LGFY V+WG+A EEK        SG + +    PLL++  N +
Sbjct: 316 GILITLGFYVVMWGKANEEK--NKLLSFSGKEKT----PLLLSGKNDQ 357

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	359
255581154	354	Auxin-induced protein 5NG4, putative [Ri	0.966	0.980	0.636	1e-124
255581150	348	Auxin-induced protein 5NG4, putative [Ri	0.952	0.982	0.596	1e-112
225424734	341	PREDICTED: auxin-induced protein 5NG4-li	0.941	0.991	0.581	1e-108
296086520	350	unnamed protein product [Vitis vinifera]	0.941	0.965	0.581	1e-108
359473431	348	PREDICTED: auxin-induced protein 5NG4-li	0.955	0.985	0.557	1e-105
225424732	351	PREDICTED: auxin-induced protein 5NG4 [V	0.944	0.965	0.552	1e-103
356502006	349	PREDICTED: auxin-induced protein 5NG4-li	0.944	0.971	0.548	8e-99
296086528	317	unnamed protein product [Vitis vinifera]	0.874	0.990	0.564	1e-96
388507570	344	unknown [Medicago truncatula]	0.933	0.973	0.547	1e-95
357485995	344	Auxin-induced protein 5NG4 [Medicago tru	0.933	0.973	0.547	1e-95

>gi|255581154|ref|XP_002531390.1| Auxin-induced protein 5NG4, putative [Ricinus communis] gi|223528983|gb|EEF30974.1| Auxin-induced protein 5NG4, putative [Ricinus communis]

 Score =  450 bits (1157), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 222/349 (63%), Positives = 279/349 (79%), Gaps = 2/349 (0%)

Query: 2   GASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTP 61
           G+ VTA M+TLEFL+VG+NTVTKAAMS+G SH+ILVVYSN +AI LL+ SS IFYRKR  
Sbjct: 6   GSGVTAVMLTLEFLEVGMNTVTKAAMSKGMSHYILVVYSNMIAISLLLSSSLIFYRKRIA 65

Query: 62  PQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKL 121
           P +T SI+CRIF+L LLSC GQ+F Y GI   SP LASAMIDLTP FTFIL +  RME+L
Sbjct: 66  PAITLSIICRIFVLSLLSCAGQVFTYIGIGYSSPTLASAMIDLTPAFTFILGVFSRMERL 125

Query: 122 ELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITS-APSKNKLINELVQLPLSNWTIGGIF 180
           +LR++S QAKS GT++LI G L+ TLYKGLPIT  + S ++L  E++ L  SNW IGG F
Sbjct: 126 DLRIKSGQAKSIGTMVLIIGGLVFTLYKGLPITGISSSGDELHKEMLFLSPSNWAIGGFF 185

Query: 181 LAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDI 240
           LAAHS+ILA+ +++Q WI+RDYP+ L+  L    FVTILS++VSLVAEK+PNAWR++PDI
Sbjct: 186 LAAHSIILALIFVIQTWIIRDYPSVLITNLFTCTFVTILSASVSLVAEKDPNAWRIKPDI 245

Query: 241 ELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSF 300
           +L++IG++A+FAVS+RSV HTWA  KKGPVY SMFKP+GMV+A+  G++FLGDTLYLGS 
Sbjct: 246 QLISIGFTAVFAVSLRSVVHTWACHKKGPVYTSMFKPIGMVIAVFMGVSFLGDTLYLGSV 305

Query: 301 VGAATIALGFYAVIWGQAKEEKMDEDHTEISGFKPSSPCVPLLINKSNT 349
           +GA  IA GFYAV+WG+ +EE   ED  + S F+PSSP  PLL NKS +
Sbjct: 306 IGAVIIAFGFYAVMWGKTQEENTVEDKEDCS-FEPSSPKAPLLQNKSTS 353

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255581150|ref|XP_002531388.1| Auxin-induced protein 5NG4, putative [Ricinus communis] gi|223528981|gb|EEF30972.1| Auxin-induced protein 5NG4, putative [Ricinus communis]

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 204/342 (59%), Positives = 257/342 (75%)

Query: 2   GASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTP 61
           G  VTAAMV  EF +VG+NT+ KAAMSRG S F+  VYSN  A+ +L+PSSFIFYR+R  
Sbjct: 3   GTGVTAAMVATEFTEVGINTMMKAAMSRGMSQFVYTVYSNAFALLILIPSSFIFYRRRPR 62

Query: 62  PQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKL 121
           PQLT SI+ R FLLGLLSCC QMF   G++  SP L++AMIDLTP FTF+LAII RMEKL
Sbjct: 63  PQLTVSIIFRTFLLGLLSCCVQMFMNTGVKYSSPTLSAAMIDLTPAFTFLLAIISRMEKL 122

Query: 122 ELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFL 181
           + + QS+QAKS GT++ + GALIVTLYKG PIT+ PS++  +N+ + L  S W  GGIF 
Sbjct: 123 DYKSQSTQAKSIGTIVSVAGALIVTLYKGQPITTLPSESNSLNQPLLLLSSTWVTGGIFC 182

Query: 182 AAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIE 241
            A ++ LA+ YIVQ WI++D PAEL++T I   FVT+LSS V+LVAEK+ ++W L+PDIE
Sbjct: 183 TAGALCLALLYIVQTWILKDCPAELIITCIACFFVTVLSSIVALVAEKDISSWILKPDIE 242

Query: 242 LMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFV 301
           L+A   SA+FAVS+RSV H WA RKKGP+Y SMFKPLG+++A   G  FLGDTLY GS +
Sbjct: 243 LIATFCSAVFAVSIRSVVHAWACRKKGPLYASMFKPLGIIIATFLGFYFLGDTLYDGSVI 302

Query: 302 GAATIALGFYAVIWGQAKEEKMDEDHTEISGFKPSSPCVPLL 343
           G   IALGFY+V+WG+A+EEKM +D    S    +SP  PLL
Sbjct: 303 GGIIIALGFYSVLWGKAQEEKMGKDERNSSFESSASPKAPLL 344

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225424734|ref|XP_002266639.1| PREDICTED: auxin-induced protein 5NG4-like [Vitis vinifera]

 Score =  397 bits (1020), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 197/339 (58%), Positives = 253/339 (74%), Gaps = 1/339 (0%)

Query: 9   MVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSI 68
           M+ +E L++GLNT++KAAMSRG S+F+ VVYSNT AI  L+ S  +F+R++TPP LT SI
Sbjct: 1   MLVIESLEMGLNTISKAAMSRGMSNFVFVVYSNTFAIPFLLLSCLLFHRRKTPPPLTTSI 60

Query: 69  VCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSS 128
           +CRIF+LGL+SC  QMF Y GI   SP LASAM DL P FTFILAII RME L+LRV+SS
Sbjct: 61  LCRIFVLGLISCSIQMFMYVGIRYSSPTLASAMTDLVPAFTFILAIITRMENLDLRVRSS 120

Query: 129 QAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVIL 188
           +AKS GT++ I GAL +T+Y+G P+      +  +N  V LP SNW IGGI  A  + +L
Sbjct: 121 RAKSIGTIMSITGALTMTMYEGPPVAFTSLTSTKLNGNVTLPQSNWVIGGILSAIAAFML 180

Query: 189 AIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYS 248
           A+ ++ Q  I+R YPAELMVTLIC  FV + SS VSL+AE+NP+AWRLRPDIEL+AI YS
Sbjct: 181 AVLFVFQTSIIRAYPAELMVTLICCTFVAMQSSIVSLMAERNPSAWRLRPDIELIAIVYS 240

Query: 249 AIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIAL 308
           A+  V +RSV   W +R+KGP + +MFKP+G+++A+V G+ FLGDTLYLGS VGAA IA+
Sbjct: 241 AVLVVGLRSVASAWVMRRKGPFFAAMFKPVGIIIAVVMGVTFLGDTLYLGSVVGAAIIAI 300

Query: 309 GFYAVIWGQAKEEKMDEDHTEISGFKPSSPCVPLLINKS 347
           GFY V+WG+ KEE + ED     G + SS  VPLL NK+
Sbjct: 301 GFYTVMWGKDKEETLLED-VPAHGMESSSHNVPLLQNKT 338

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296086520|emb|CBI32109.3| unnamed protein product [Vitis vinifera]

 Score =  397 bits (1019), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 197/339 (58%), Positives = 253/339 (74%), Gaps = 1/339 (0%)

Query: 9   MVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSI 68
           M+ +E L++GLNT++KAAMSRG S+F+ VVYSNT AI  L+ S  +F+R++TPP LT SI
Sbjct: 10  MLVIESLEMGLNTISKAAMSRGMSNFVFVVYSNTFAIPFLLLSCLLFHRRKTPPPLTTSI 69

Query: 69  VCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSS 128
           +CRIF+LGL+SC  QMF Y GI   SP LASAM DL P FTFILAII RME L+LRV+SS
Sbjct: 70  LCRIFVLGLISCSIQMFMYVGIRYSSPTLASAMTDLVPAFTFILAIITRMENLDLRVRSS 129

Query: 129 QAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVIL 188
           +AKS GT++ I GAL +T+Y+G P+      +  +N  V LP SNW IGGI  A  + +L
Sbjct: 130 RAKSIGTIMSITGALTMTMYEGPPVAFTSLTSTKLNGNVTLPQSNWVIGGILSAIAAFML 189

Query: 189 AIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYS 248
           A+ ++ Q  I+R YPAELMVTLIC  FV + SS VSL+AE+NP+AWRLRPDIEL+AI YS
Sbjct: 190 AVLFVFQTSIIRAYPAELMVTLICCTFVAMQSSIVSLMAERNPSAWRLRPDIELIAIVYS 249

Query: 249 AIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIAL 308
           A+  V +RSV   W +R+KGP + +MFKP+G+++A+V G+ FLGDTLYLGS VGAA IA+
Sbjct: 250 AVLVVGLRSVASAWVMRRKGPFFAAMFKPVGIIIAVVMGVTFLGDTLYLGSVVGAAIIAI 309

Query: 309 GFYAVIWGQAKEEKMDEDHTEISGFKPSSPCVPLLINKS 347
           GFY V+WG+ KEE + ED     G + SS  VPLL NK+
Sbjct: 310 GFYTVMWGKDKEETLLED-VPAHGMESSSHNVPLLQNKT 347

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359473431|ref|XP_002265468.2| PREDICTED: auxin-induced protein 5NG4-like [Vitis vinifera]

 Score =  387 bits (994), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 193/346 (55%), Positives = 255/346 (73%), Gaps = 3/346 (0%)

Query: 3   ASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPP 62
           + + A M+ +E L+VGL+T++KAAM RG S F+ VVYSN L++ +L+    +F+R+R PP
Sbjct: 4   SDLMALMLIIECLEVGLSTLSKAAMRRGMSDFVFVVYSNALSVPILLFCCLLFHRRRFPP 63

Query: 63  QLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLE 122
            LT SI+CRIF+LG +SC  QMF + GI   SP LASAM DL P FTFILAII RMEKL+
Sbjct: 64  PLTLSILCRIFILGFISCSTQMFLFVGIRYSSPTLASAMTDLVPAFTFILAIISRMEKLD 123

Query: 123 LRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLA 182
           L+  S +AK  GT++ I GALIVT+YKG  I  A S  K+++E ++  +SNW IGG  LA
Sbjct: 124 LKAGSCRAKCIGTIVSIIGALIVTIYKGPQIAFASSTFKILDENLRSQISNWVIGGFLLA 183

Query: 183 AHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIEL 242
             +V +A++Y+VQ  I+RDYPAELM+T IC IFVT+ SS VSL+AE++P+AWRL+PD+EL
Sbjct: 184 ISAVSIALFYVVQTSIIRDYPAELMLTFICHIFVTMQSSIVSLIAERDPSAWRLKPDVEL 243

Query: 243 MAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVG 302
           +A+GYSA+  ++ R   H W L KKGPV+V+MFKP+ +V+A+V G+ FLGD L+LGS +G
Sbjct: 244 IAVGYSAVLVLAFRGTAHAWVLHKKGPVFVAMFKPVAIVIAVVMGVTFLGDVLHLGSVIG 303

Query: 303 AATIALGFYAVIWGQAKEEKMDEDHTEISGFKPSSPCVPLLINKSN 348
           AA IA GFY V+WG+AKEE   ED T  SG   SS   PLL NKS 
Sbjct: 304 AAIIAFGFYTVMWGKAKEEI--EDMTT-SGIDSSSHKDPLLQNKST 346

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225424732|ref|XP_002266096.1| PREDICTED: auxin-induced protein 5NG4 [Vitis vinifera] gi|296086521|emb|CBI32110.3| unnamed protein product [Vitis vinifera]

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 188/340 (55%), Positives = 252/340 (74%), Gaps = 1/340 (0%)

Query: 9   MVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSI 68
           ++T+E LDVGL T++KAAM RG S ++ VVYSN LA+ +L   S +F+R+R+PP LT SI
Sbjct: 11  LLTIECLDVGLITLSKAAMRRGMSDYVFVVYSNALAVPVLFLCSLLFHRRRSPPPLTPSI 70

Query: 69  VCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSS 128
           +CRIFLLGL+SC  QM  + GI   SP LASAM +L P FT++LAI+ RMEKL+L+V+SS
Sbjct: 71  LCRIFLLGLVSCSLQMLKFIGIGYSSPTLASAMTNLIPAFTYVLAIVTRMEKLDLKVKSS 130

Query: 129 QAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVIL 188
           +AK  GT++ + GAL++T+YKG  I  A +   ++N  + LP SNW IGG   AA + ++
Sbjct: 131 RAKCLGTLVSVAGALLITIYKGPGIEFASTTPSMLNHNLLLPRSNWIIGGFLTAAAAFMV 190

Query: 189 AIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYS 248
           A+  + Q  I+RDYPAEL+VTLI  IF T+ SS VSL+AE++P+AWRLR D+EL+A+GYS
Sbjct: 191 AVLLVFQTSIIRDYPAELIVTLISHIFATMQSSLVSLIAERDPSAWRLRLDMELIAVGYS 250

Query: 249 AIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIAL 308
            IF V++R   + W L +KGPV+V+MFKP G+V+A++ G+ FLGD L+LGS +GAA IAL
Sbjct: 251 GIFVVALRGAVYAWVLHQKGPVFVAMFKPAGIVIAVIMGVTFLGDKLHLGSVIGAAIIAL 310

Query: 309 GFYAVIWGQAKEEKMDEDHTEISGFKPSSPCVPLLINKSN 348
           GFY V+WG+AKEEKM ED     G   SS  VPLL NKS 
Sbjct: 311 GFYTVVWGKAKEEKMAED-IAACGVNTSSHRVPLLQNKST 349

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356502006|ref|XP_003519813.1| PREDICTED: auxin-induced protein 5NG4-like [Glycine max]

 Score =  366 bits (940), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 191/348 (54%), Positives = 248/348 (71%), Gaps = 9/348 (2%)

Query: 1   MGASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRT 60
           +G SV+AAMV   FL+VGLNT+ KAA + G S+F+ +VYSN LA+F L+PS+F+++RKR 
Sbjct: 4   VGVSVSAAMVATLFLEVGLNTLIKAANTNGMSNFVFIVYSNFLALFFLIPSTFLYHRKRA 63

Query: 61  PPQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEK 120
           PP +  SI+ RIFLL  LS   Q   Y GI   SP L SAM DL P FTFI AII RME 
Sbjct: 64  PPPIPSSILWRIFLLCCLSTAVQTLTYTGIAYSSPTLNSAMSDLVPAFTFIFAIISRMEN 123

Query: 121 LELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINEL-----VQLPLSNWT 175
           L L+++SS AK  GTV+ I GALI+TLYKG+P+T +  +N ++        VQL   +W 
Sbjct: 124 LNLKLRSSHAKIIGTVISIAGALIITLYKGMPLTGSSMRNLVLGGSEAYLSVQL---DWI 180

Query: 176 IGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWR 235
           IGG  LA  S+ L++ +IVQ WI++DYP EL+VT IC   V ILS+ V+L AE NP AW 
Sbjct: 181 IGGFLLATSSLCLSVLFIVQTWIIKDYPEELVVTTICCSPVVILSTIVALFAEANPRAWI 240

Query: 236 LRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTL 295
           L+ + EL+A+ YSAIF VS+RSV +TWA+RKKGPVYV+MF PLGMV+A+  G+ FLG++L
Sbjct: 241 LKSNKELIAVFYSAIFVVSMRSVVYTWAMRKKGPVYVAMFSPLGMVIAIGMGVIFLGESL 300

Query: 296 YLGSFVGAATIALGFYAVIWGQAKEEKMDEDHTEISGFKPSSPCVPLL 343
           YLGS +GAATI +GFYAV+W QA++EK+  +  E   F  SS   PLL
Sbjct: 301 YLGSMIGAATIGIGFYAVMWAQAQDEKLVNEKNENHDFVTSSSA-PLL 347

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296086528|emb|CBI32117.3| unnamed protein product [Vitis vinifera]

 Score =  359 bits (922), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 179/317 (56%), Positives = 233/317 (73%), Gaps = 3/317 (0%)

Query: 32  SHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFHYFGIE 91
           S F+ VVYSN L++ +L+    +F+R+R PP LT SI+CRIF+LG +SC  QMF + GI 
Sbjct: 2   SDFVFVVYSNALSVPILLFCCLLFHRRRFPPPLTLSILCRIFILGFISCSTQMFLFVGIR 61

Query: 92  NGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGL 151
             SP LASAM DL P FTFILAII RMEKL+L+  S +AK  GT++ I GALIVT+YKG 
Sbjct: 62  YSSPTLASAMTDLVPAFTFILAIISRMEKLDLKAGSCRAKCIGTIVSIIGALIVTIYKGP 121

Query: 152 PITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLI 211
            I  A S  K+++E ++  +SNW IGG  LA  +V +A++Y+VQ  I+RDYPAELM+T I
Sbjct: 122 QIAFASSTFKILDENLRSQISNWVIGGFLLAISAVSIALFYVVQTSIIRDYPAELMLTFI 181

Query: 212 CSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVY 271
           C IFVT+ SS VSL+AE++P+AWRL+PD+EL+A+GYSA+  ++ R   H W L KKGPV+
Sbjct: 182 CHIFVTMQSSIVSLIAERDPSAWRLKPDVELIAVGYSAVLVLAFRGTAHAWVLHKKGPVF 241

Query: 272 VSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQAKEEKMDEDHTEIS 331
           V+MFKP+ +V+A+V G+ FLGD L+LGS +GAA IA GFY V+WG+AKEE   ED T  S
Sbjct: 242 VAMFKPVAIVIAVVMGVTFLGDVLHLGSVIGAAIIAFGFYTVMWGKAKEEI--EDMTT-S 298

Query: 332 GFKPSSPCVPLLINKSN 348
           G   SS   PLL NKS 
Sbjct: 299 GIDSSSHKDPLLQNKST 315

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388507570|gb|AFK41851.1| unknown [Medicago truncatula]

 Score =  355 bits (912), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 190/347 (54%), Positives = 237/347 (68%), Gaps = 12/347 (3%)

Query: 2   GASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTP 61
           GASVTA MV ++FL+VG NT+ KAA + G S F+   YSN  A+  L+P +F ++RKR P
Sbjct: 5   GASVTATMVAVQFLEVGGNTLIKAATNDGTSIFVFTFYSNLFALCFLLPLTFFYHRKRAP 64

Query: 62  PQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKL 121
           P ++ SI+CR+FLL  LS   Q+    GIE  SP LASAM+DL P FTFILA+I RME L
Sbjct: 65  PSISSSILCRMFLLSCLSTAVQILTNTGIECSSPTLASAMLDLLPAFTFILALISRMENL 124

Query: 122 ELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINEL-VQLPL-SNWTIGGI 179
            L+  SSQAK  GTV+ I GAL VTLYKG+P+ S   +N  I    + L + S+W +G  
Sbjct: 125 NLKHHSSQAKIIGTVVSIAGALTVTLYKGIPLISDAFQNIEIGASGIHLSVKSDWILGAF 184

Query: 180 FLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPD 239
            LA  S  L++ YIVQ WI+RDYP EL+VT IC   V ILS+ V+L+AE N   W LRPD
Sbjct: 185 LLATASFCLSVLYIVQTWIIRDYPEELVVTSICCSMVVILSAIVALIAEGNSKVWILRPD 244

Query: 240 IELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGS 299
            EL+A+ YSAI  VS+RSV +TWA RKKGP+YV+MF PLGMV+AL  G+ FLGD+LYLGS
Sbjct: 245 RELVAVCYSAICVVSMRSVVYTWAFRKKGPIYVAMFNPLGMVIALGMGVIFLGDSLYLGS 304

Query: 300 FVGAATIALGFYAVIWGQAKEEKMDEDHTEISGFKPSSPCVPLLINK 346
            +GAA IA+GFYAV+W QA+EE     HT      P     PLL  K
Sbjct: 305 MIGAAIIAIGFYAVMWAQAQEE-----HTTCENKFP-----PLLSTK 341

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357485995|ref|XP_003613285.1| Auxin-induced protein 5NG4 [Medicago truncatula] gi|355514620|gb|AES96243.1| Auxin-induced protein 5NG4 [Medicago truncatula]

 Score =  355 bits (912), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 190/347 (54%), Positives = 237/347 (68%), Gaps = 12/347 (3%)

Query: 2   GASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTP 61
           GASVTA MV ++FL+VG NT+ KAA + G S F+   YSN  A+  L+P +F ++RKR P
Sbjct: 5   GASVTATMVAVQFLEVGGNTLIKAATNDGMSIFVFTFYSNLFALCFLLPLTFFYHRKRAP 64

Query: 62  PQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKL 121
           P ++ SI+CR+FLL  LS   Q+    GIE  SP LASAM+DL P FTFILA+I RME L
Sbjct: 65  PSISSSILCRMFLLSCLSTAVQILTNTGIECSSPTLASAMLDLLPAFTFILALISRMENL 124

Query: 122 ELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINEL-VQLPL-SNWTIGGI 179
            L+  SSQAK  GTV+ I GAL VTLYKG+P+ S   +N  I    + L + S+W +G  
Sbjct: 125 NLKHHSSQAKIIGTVVSIAGALTVTLYKGIPLISDAFQNIEIGASGIHLSVKSDWILGAF 184

Query: 180 FLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPD 239
            LA  S  L++ YIVQ WI+RDYP EL+VT IC   V ILS+ V+L+AE N   W LRPD
Sbjct: 185 LLATASFCLSVLYIVQTWIIRDYPEELVVTSICCSMVVILSAIVALIAEGNSKVWILRPD 244

Query: 240 IELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGS 299
            EL+A+ YSAI  VS+RSV +TWA RKKGP+YV+MF PLGMV+AL  G+ FLGD+LYLGS
Sbjct: 245 RELVAVCYSAICVVSMRSVVYTWAFRKKGPIYVAMFNPLGMVIALGMGVIFLGDSLYLGS 304

Query: 300 FVGAATIALGFYAVIWGQAKEEKMDEDHTEISGFKPSSPCVPLLINK 346
            +GAA IA+GFYAV+W QA+EE     HT      P     PLL  K
Sbjct: 305 MIGAAIIAIGFYAVMWAQAQEE-----HTTCENKFP-----PLLSTK 341

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	359
TAIR|locus:2091363	367	UMAMIT41 "AT3G28050" [Arabidop	0.949	0.929	0.441	3.2e-72
TAIR|locus:2173737	339	UMAMIT42 "Usually multiple aci	0.849	0.899	0.448	3.1e-67
TAIR|locus:2173752	370	UMAMIT37 "AT5G40230" [Arabidop	0.913	0.886	0.431	4.5e-66
TAIR|locus:2130344	347	UMAMIT38 "AT4G15540" [Arabidop	0.852	0.881	0.423	5.4e-63
TAIR|locus:2091368	355	UMAMIT44 "AT3G28130" [Arabidop	0.888	0.898	0.421	8.8e-63
TAIR|locus:2091338	353	UMAMIT45 "AT3G28100" [Arabidop	0.919	0.934	0.433	3.8e-62
TAIR|locus:2091383	360	UMAMIT46 "AT3G28070" [Arabidop	0.933	0.930	0.416	4.3e-61
TAIR|locus:2091393	358	UMAMIT47 "AT3G28080" [Arabidop	0.935	0.938	0.393	1.7e-57
TAIR|locus:2169414	402	UMAMIT9 "Usually multiple acid	0.874	0.781	0.368	2.1e-52
TAIR|locus:2194864	370	SIAR1 "Siliques Are Red 1" [Ar	0.877	0.851	0.341	9.5e-50

TAIR|locus:2091363 UMAMIT41 "AT3G28050" [Arabidopsis thaliana (taxid:3702)]

 Score = 730 (262.0 bits), Expect = 3.2e-72, P = 3.2e-72
 Identities = 156/353 (44%), Positives = 218/353 (61%)

Query:     8 AMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWS 67
             A+V +E  +VGLNT+ KAA  +G S  + +VYS  LA  LL+PS F  +R RT P + +S
Sbjct:    15 ALVIMECANVGLNTLFKAATLKGMSFHVFIVYSYGLAALLLLPSLFCSFRSRTLPPMNFS 74

Query:    68 IVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQS 127
             I+ +I LLG++ CC  +  Y GI   SP LASA+ +LTP FTF+LA++FRME +  +  S
Sbjct:    75 ILYKIVLLGIIGCCSNIMGYTGINYSSPTLASAISNLTPAFTFLLAVVFRMESVSFKRTS 134

Query:   128 SQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVI 187
             S AK  GTV+ IGGA IVTLY G P+  A S    ++   Q    NW +G  FLA     
Sbjct:   135 SVAKMLGTVVSIGGAFIVTLYNG-PVVIAKSPPS-VSLRSQSTNPNWILGAGFLAVEYFC 192

Query:   188 LAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNP-NAWRLRPDIELMAIG 246
             + ++YIVQ  I+R+YPAE  V    SI V+  ++ V+L  E N   AW+++P+I L++I 
Sbjct:   193 VPLWYIVQTQIMREYPAEFTVVCFYSIGVSFWTALVTLFTEGNDLGAWKIKPNIALVSIV 252

Query:   247 YSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATI 306
              S +F   + +  HTWALR KGP++V+MFKPL + +A+  G+ FL D+LY+GS +GA  I
Sbjct:   253 CSGLFGSCINNTIHTWALRIKGPLFVAMFKPLSIAIAVAMGVIFLRDSLYIGSLIGATVI 312

Query:   307 ALGFYAVIWGQAKEEKMDED-----HTEISGFKPSSPC----VPLLINKSNTE 350
              +GFY V+WG+AKE  + ED     H E +     SP      PLL +  N E
Sbjct:   313 TIGFYTVMWGKAKEVALVEDDNKANHEEANEADLDSPSGSQKAPLLESYKNDE 365

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2173737 UMAMIT42 "Usually multiple acids move in and out Transporters 42" [Arabidopsis thaliana (taxid:3702)]

 Score = 683 (245.5 bits), Expect = 3.1e-67, P = 3.1e-67
 Identities = 144/321 (44%), Positives = 212/321 (66%)

Query:     5 VTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQL 64
             +  AMV  EF +VG+NT+ KAA S+G S F+++VYS T    LL+P +F  +R R+ P L
Sbjct:    13 ILTAMVVTEFSNVGVNTLVKAATSKGLSPFVVLVYSYTFGSLLLLPLTFFSFRSRSLPPL 72

Query:    65 TWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELR 124
             T+SI+C + +LGL++   Q+  Y GI+  SP L+SAM ++ P FTFILA++FRME + L 
Sbjct:    73 TFSILCNMGILGLIASAFQILGYNGIKYSSPTLSSAMSNVNPAFTFILAVVFRMENISLG 132

Query:   125 VQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAH 184
              +SS AK  GT+L I GAL+VTLY G  + S+ S              +W IGG  LA  
Sbjct:   133 KKSSVAKVLGTILSIIGALVVTLYHGPMLMSSHS--------------DWIIGGGLLALQ 178

Query:   185 SVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEK-NPNAWRLRPDIELM 243
              +++++ Y+V A  +  YP+ ++VTL+ ++ + ++ + VSL+AEK NP AW +R DI L+
Sbjct:   179 YILVSVSYLVMAHTMGRYPSAVVVTLVHNVCIAVVCAFVSLLAEKDNPKAWVIRFDITLI 238

Query:   244 AIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGA 303
              +  + I   S   V HTWA+  KGPVY+SMFKPL +++A V    FLG++LYLGS +G 
Sbjct:   239 TVVATGILN-SGYYVIHTWAVSHKGPVYLSMFKPLSILIAAVSTFIFLGESLYLGSVMGG 297

Query:   304 ATIALGFYAVIWGQAKEEKMD 324
               I++GFY V+WG+AKE+K+D
Sbjct:   298 ILISIGFYMVLWGKAKEDKVD 318

GO:0016020 "membrane" evidence=IEA

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2173752 UMAMIT37 "AT5G40230" [Arabidopsis thaliana (taxid:3702)]

 Score = 672 (241.6 bits), Expect = 4.5e-66, P = 4.5e-66
 Identities = 145/336 (43%), Positives = 208/336 (61%)

Query:     8 AMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWS 67
             AMV +E + VG NT+ KAA  RG S ++ V Y+  +A  +L+P S IF R +  P     
Sbjct:    24 AMVAVECVTVGSNTLFKAATLRGLSFYVFVFYTYVVATLVLLPLSLIFGRSKRLPSAKTP 83

Query:    68 IVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQS 127
             +   IFLL L+     +    GIE  SP LASA+ +LTP FTF LA+IFRME++ LR  +
Sbjct:    84 VFFNIFLLALVGFMSLIVGCKGIEYSSPTLASAISNLTPAFTFTLAVIFRMEQIVLRSSA 143

Query:   128 SQAKSFGTVLLIGGALIVTLYKGLPI-TSA----PSKN-KLINELVQLPLSNWTIGGIFL 181
             +QAK  GT++ I GAL+V LYKG  + T A    PS    L   L     S+W IGG+ L
Sbjct:   144 TQAKIIGTIVSISGALVVILYKGPKVLTDASLTPPSPTISLYQHLTSFD-SSWIIGGLLL 202

Query:   182 AAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIE 241
             A   ++++++YI+Q  ++  YP E+ V  + ++  T++S+ V L AEK+ N++ L+P + 
Sbjct:   203 ATQYLLVSVWYILQTRVMELYPEEITVVFLYNLCATLISAPVCLFAEKDLNSFILKPGVS 262

Query:   242 LMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFV 301
             L ++ YS     S  SV HTW L  KGPVY+S+FKPL +V+A+  G+ FLGD LYLGS +
Sbjct:   263 LASVMYSGGLVSSFGSVIHTWGLHLKGPVYISLFKPLSIVIAVAMGVMFLGDALYLGSVI 322

Query:   302 GAATIALGFYAVIWGQAKEEKMDE-DHTEISGFKPS 336
             G+  ++LGFY VIWG+A+E+ +     TE S   PS
Sbjct:   323 GSLILSLGFYTVIWGKAREDSIKTVAGTEQSPLLPS 358

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2130344 UMAMIT38 "AT4G15540" [Arabidopsis thaliana (taxid:3702)]

 Score = 643 (231.4 bits), Expect = 5.4e-63, P = 5.4e-63
 Identities = 133/314 (42%), Positives = 196/314 (62%)

Query:     8 AMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWS 67
             AM+ +E   VG + + KAA  RG S ++ V Y+   A  +L+  S IF R R+ P    S
Sbjct:    20 AMIAIECTTVGSSILYKAATLRGFSFYVFVFYAYVGATLVLLLLSLIFGRSRSLPTAKSS 79

Query:    68 IVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQS 127
             +  +IFLL LL    ++    GIE  SP L+SA+ +LTP FTFILAI FRME++ LR  +
Sbjct:    80 LFFKIFLLALLGLTSRVAGCKGIEYSSPTLSSAISNLTPAFTFILAIFFRMEQVMLRSSA 139

Query:   128 SQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVI 187
             +QAK  GT++ I GAL++ LYKG  +  A S      E      S+W IGG+ L    ++
Sbjct:   140 TQAKIIGTIVSISGALVIVLYKGPKLLVAASFTSF--E------SSWIIGGLLLGLQFLL 191

Query:   188 LAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGY 247
             L++++I+Q  I+  YP E+ V    ++  T++S  V L+ EK+ N+W+L+P   L ++ Y
Sbjct:   192 LSVWFILQTHIMEIYPEEIAVVFCYNLCATLISGTVCLLVEKDLNSWQLKPGFSLASVIY 251

Query:   248 SAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIA 307
             S +F  S+ SV HTW L  KGPVY+S+FKPL + +A+     FLGDTL+LGS +G+  ++
Sbjct:   252 SGLFDTSLGSVIHTWGLHVKGPVYISLFKPLSIAIAVAMAAIFLGDTLHLGSVIGSVILS 311

Query:   308 LGFYAVIWGQAKEE 321
              GFY VIWG+A+E+
Sbjct:   312 FGFYTVIWGKARED 325

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2091368 UMAMIT44 "AT3G28130" [Arabidopsis thaliana (taxid:3702)]

 Score = 641 (230.7 bits), Expect = 8.8e-63, P = 8.8e-63
 Identities = 137/325 (42%), Positives = 203/325 (62%)

Query:     3 ASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPP 62
             A +  AM+  E  +V +NT+ KAA S+G + +  ++YS  +   +L+PS    YR R+ P
Sbjct:    11 AVLLTAMLATETGNVAMNTLFKAATSKGLNSYTFLIYSYLIGSIVLLPSHIFSYRSRSLP 70

Query:    63 QLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLE 122
              L+ SI+C+I +LGLL     +  + GIE  +P LASA+ ++ P  TFILAIIFRMEK  
Sbjct:    71 SLSLSILCKIGVLGLLGSTYLITGFIGIEYSNPTLASAISNINPAITFILAIIFRMEKAS 130

Query:   123 LRVQSSQAKSFGTVLLIGGALIVTLYKGLPI--TSAPSKNKLINELVQLPLSN--WTIGG 178
              + +SS AK  GT++ + GAL+V LY G  +   S+P   +L   L+ L  SN  W IGG
Sbjct:   131 FKEKSSVAKMVGTIVSLVGALVVVLYHGPRVFTPSSPPFPQLRQLLLPLSSSNSDWIIGG 190

Query:   179 IFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKN-PNAWRLR 237
               LA    ++ + +I+QA I++ YPA   V+    +  +IL+S + +VAEKN P+ W + 
Sbjct:   191 CLLAIKDTLVPVAFILQAHIMKLYPAPFTVSFFYFLIASILTSLIGIVAEKNNPSIWIIH 250

Query:   238 PDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYL 297
              DI L+ I    IF     ++ H WA+R KGPVY+++F+PL +++A++ G  FLGD+ YL
Sbjct:   251 FDITLVCIVVGGIFNPGYYAI-HLWAVRNKGPVYLAIFRPLSILIAVIMGAIFLGDSFYL 309

Query:   298 GSFVGAATIALGFYAVIWGQAKEEK 322
             GS VG   I+LGFY V+WG+AKE K
Sbjct:   310 GSLVGGILISLGFYTVMWGKAKEGK 334

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2091338 UMAMIT45 "AT3G28100" [Arabidopsis thaliana (taxid:3702)]

 Score = 635 (228.6 bits), Expect = 3.8e-62, P = 3.8e-62
 Identities = 149/344 (43%), Positives = 210/344 (61%)

Query:     8 AMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWS 67
             AM+  E   VG++T+ K A S+G + +  + YS  LA  LL+PS F   R R+ P L+ S
Sbjct:    17 AMLATETGVVGISTLFKVATSKGLNLYAFLGYSYLLASLLLLPSLFFTDRSRSLPPLSLS 76

Query:    68 IVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQS 127
             I+ +I LLGLL     +  Y GIE  SP LASA+ ++TP  TFILAIIFRMEK+  + +S
Sbjct:    77 ILSKIGLLGLLGSMYVITGYIGIEYSSPTLASAISNITPALTFILAIIFRMEKVSFKERS 136

Query:   128 SQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLIN-ELVQLPLSN----WTIGGIFLA 182
             S AK  GT+L + GAL+V LY G P     S    IN   +  PLS+    W IGG  L 
Sbjct:   137 SVAKVMGTILSLIGALVVVLYHG-PRVFVASSPPYINFRQLSPPLSSSNSDWLIGGALLT 195

Query:   183 AHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKN-PNAWRLRPDIE 241
                + +++ +I+QA I+  YPA   V+ +  + V+I++S + LV EKN P+ W +R DI 
Sbjct:   196 IRDIFVSVSFILQAKIMSTYPAAFTVSFLYIVSVSIVTSMIGLVVEKNNPSVWIIRFDIT 255

Query:   242 LMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFV 301
             L+ I   AI   SV  V H+W +R KGP+Y+++FKPL +++A+V    FL D+LYLG  +
Sbjct:   256 LITIVTMAIIT-SVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMSAVFLNDSLYLGCLI 314

Query:   302 GAATIALGFYAVIWGQAKEEKMDEDHTEISGFKPSSPCVPLLIN 345
             G   I LGFYAV+WG+A EEK  +    +SG + +    PLL+N
Sbjct:   315 GGLLITLGFYAVMWGKANEEK--DQLLLVSGKERT----PLLLN 352

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2091383 UMAMIT46 "AT3G28070" [Arabidopsis thaliana (taxid:3702)]

 Score = 625 (225.1 bits), Expect = 4.3e-61, P = 4.3e-61
 Identities = 145/348 (41%), Positives = 209/348 (60%)

Query:     8 AMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWS 67
             AM+ +E   VG++T+ K A S+G + +  + YS  LA  LL+PS F   R  + P L+ S
Sbjct:    20 AMLVVETSVVGISTLFKFATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSSSLPPLSVS 79

Query:    68 IVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQS 127
             I+ +I LLG L     +  Y GIE  SP LASA+ ++TP  TFILAIIFRMEK+  + +S
Sbjct:    80 ILSKIGLLGFLGSMYVITGYIGIEYSSPTLASAINNITPALTFILAIIFRMEKVSFKERS 139

Query:   128 SQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSN----WTIGGIFLAA 183
             S AK  GT+L + GAL+V  Y G  +  A S   +       PLS+    W IGG  L  
Sbjct:   140 SLAKLMGTILSLIGALVVIFYHGPRVFLASSPPYVNFRQFSPPLSSSNSDWLIGGALLTM 199

Query:   184 HSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKN-PNAWRLRPDIEL 242
               + +++ +I+QA I+  YPA   V+ + ++ V+I++S + LV EKN P+ W +  DI L
Sbjct:   200 QGIFVSVSFILQAHIMSVYPAAFRVSFLYTVCVSIVTSTIGLVVEKNNPSVWIIHFDITL 259

Query:   243 MAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVG 302
             + I   AI   SV  V H+W +R KGP+Y+++FKPL +++A+V G  FL D+LYLG  +G
Sbjct:   260 ITIVTMAI-VTSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIG 318

Query:   303 AATIALGFYAVIWGQAKEEKMDEDHTEISGFKPSSPCVPLLINKSNTE 350
                I LGFYAV+WG+A EEK   D    S  + +    PLL+N+ N +
Sbjct:   319 GILITLGFYAVMWGKANEEK---DQLSFSEKEKT----PLLLNRKNDQ 359

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2091393 UMAMIT47 "AT3G28080" [Arabidopsis thaliana (taxid:3702)]

 Score = 591 (213.1 bits), Expect = 1.7e-57, P = 1.7e-57
 Identities = 137/348 (39%), Positives = 203/348 (58%)

Query:     8 AMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWS 67
             AM+  E   VGL+T+ K A S+G + +  + YS  LA  LL+PS F   R R+ P L+ S
Sbjct:    17 AMLAGETSIVGLSTLFKVATSKGLNIYPFLSYSYLLASLLLLPSLFFTNRSRSLPPLSAS 76

Query:    68 IVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQS 127
             I+ +I LLG L     +    GIE  +P LASA+ ++ P  TFILA+IFRMEK+  + +S
Sbjct:    77 ILSKIGLLGFLGSMYVITGGIGIEYSNPTLASAIGNIVPALTFILAVIFRMEKVSFKERS 136

Query:   128 SQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSN----WTIGGIFLAA 183
             S AK  GT+L + GA +V  Y G  +  A S   L    +  PLS+    W IGG  L  
Sbjct:   137 SVAKVMGTILSLIGAFVVIFYHGPRVFVASSPPYLNFRQLSPPLSSSKSDWLIGGAILTI 196

Query:   184 HSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKN-PNAWRLRPDIEL 242
               + +++ +I+Q  I+R+YP    V+++  + ++I++S + LV EKN P+ W +  DI L
Sbjct:   197 QGIFVSVSFILQTHIMREYPEAFTVSILYILCISIVTSMIGLVVEKNNPSIWIIHFDITL 256

Query:   243 MAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVG 302
               I  + I   SV  V H+WA+R K P+Y+++FKPL +++A+V G  FL D+LYLG  +G
Sbjct:   257 FTIVTTGIIT-SVYYVIHSWAIRHKRPLYLAIFKPLSILIAVVMGTIFLNDSLYLGCLIG 315

Query:   303 AATIALGFYAVIWGQAKEEKMDEDHTEISGFKPSSPCVPLLINKSNTE 350
                I LGFY V+WG+A EEK      ++  F       PLL++  N +
Sbjct:   316 GILITLGFYVVMWGKANEEK-----NKLLSFSGKEK-TPLLLSGKNDQ 357

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

TAIR|locus:2169414 UMAMIT9 "Usually multiple acids move in and out Transporters 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
 Identities = 121/328 (36%), Positives = 196/328 (59%)

Query:     8 AMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWS 67
             AM++L+F   G+N +TK +++ G SH++LVVY + +A  ++ P +F F RK   P++T+S
Sbjct:    21 AMISLQFGYAGMNIITKISLNTGMSHYVLVVYRHAIATAVIAPFAFFFERK-AQPKITFS 79

Query:    68 IVCRIFLLGLLS-CCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQ 126
             I  ++F+LGLL     Q F+Y G++  SP  + AM ++ P  TFILA++FRME L+L+  
Sbjct:    80 IFMQLFILGLLGPVIDQNFYYMGLKYTSPTFSCAMSNMLPAMTFILAVLFRMEMLDLKKL 139

Query:   127 SSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSN---------WTIG 177
               QAK  GTV+ + GA+++T+YKG  +    +K   I +      ++         +  G
Sbjct:   140 WCQAKIAGTVVTVAGAMLMTIYKGPIVELFWTKYMHIQDSSHANTTSSKNSSSDKEFLKG 199

Query:   178 GIFLAAHSVILAIYYIVQAWIVRDYPA-EL-MVTLICSIFVTILSSAVSLVAEKNPNAWR 235
              I L   ++  A  +++QA I++ Y   +L + TLIC I  T+ + AV+ V E NP+AWR
Sbjct:   200 SILLIFATLAWASLFVLQAKILKTYAKHQLSLTTLICFIG-TLQAVAVTFVMEHNPSAWR 258

Query:   236 LRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTL 295
             +  D+ L+A  YS I A S+        ++K+GPV+ + F PL MV+  V G   L + +
Sbjct:   259 IGWDMNLLAAAYSGIVASSISYYVQGIVMKKRGPVFATAFSPLMMVIVAVMGSFVLAEKI 318

Query:   296 YLGSFVGAATIALGFYAVIWGQAKEEKM 323
             +LG  +GA  I +G YAV+WG+ KE ++
Sbjct:   319 FLGGVIGAVLIVIGLYAVLWGKQKENQV 346

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2194864 SIAR1 "Siliques Are Red 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 518 (187.4 bits), Expect = 9.5e-50, P = 9.5e-50
 Identities = 111/325 (34%), Positives = 187/325 (57%)

Query:     8 AMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWS 67
             A+++L+F   G+  +T  +   G  H++L  Y + +A  ++ P + +F RK   P++T +
Sbjct:    14 AIISLQFGYAGMYIITMVSFKHGMDHWVLATYRHVVATVVMAPFALMFERK-IRPKMTLA 72

Query:    68 IVCRIFLLGLLS-CCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQ 126
             I  R+  LG+L     Q  +Y G++N S +  SA  +  P  TFILA+IFR+E +  R  
Sbjct:    73 IFWRLLALGILEPLMDQNLYYIGLKNTSASYTSAFTNALPAVTFILALIFRLETVNFRKV 132

Query:   127 SSQAKSFGTVLLIGGALIVTLYKG--LPITSAPSKNKLINELVQLPLS-NWTIGGIFLAA 183
              S AK  GTV+ +GGA+I+TLYKG  + I  A + N         P   +W +G I +  
Sbjct:   133 HSVAKVVGTVITVGGAMIMTLYKGPAIEIVKA-AHNSFHGGSSSTPTGQHWVLGTIAIMG 191

Query:   184 HSVILAIYYIVQAWIVRDYPAEL-MVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIEL 242
                  A ++I+Q++ ++ YPAEL +VTLIC I  TIL++  SL+  ++P+AW++  D   
Sbjct:   192 SISTWAAFFILQSYTLKVYPAELSLVTLICGIG-TILNAIASLIMVRDPSAWKIGMDSGT 250

Query:   243 MAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVG 302
             +A  YS +    +     +  ++++GPV+ + F P+ M++    G   L + ++LGS +G
Sbjct:   251 LAAVYSGVVCSGIAYYIQSIVIKQRGPVFTTSFSPMCMIITAFLGALVLAEKIHLGSIIG 310

Query:   303 AATIALGFYAVIWGQAKEE--KMDE 325
             A  I LG Y+V+WG++K+E   +DE
Sbjct:   311 AVFIVLGLYSVVWGKSKDEVNPLDE 335

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

GO:0005515 "protein binding" evidence=IPI

GO:0005886 "plasma membrane" evidence=IDA

GO:0006865 "amino acid transport" evidence=IDA

GO:0015171 "amino acid transmembrane transporter activity" evidence=IDA

GO:0032973 "amino acid export" evidence=IDA

GO:0034639 "L-amino acid efflux transmembrane transporter activity" evidence=IDA

GO:0043090 "amino acid import" evidence=IDA

GO:0080144 "amino acid homeostasis" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q94JU2	WTR18_ARATH	No assigned EC number	0.4419	0.9498	0.9291	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	359
PLN00411	358	PLN00411, PLN00411, nodulin MtN21 family protein;	6e-76
COG0697	292	COG0697, RhaT, Permeases of the drug/metabolite tr	7e-06
pfam00892	126	pfam00892, EamA, EamA-like transporter family	6e-04
pfam00892	126	pfam00892, EamA, EamA-like transporter family	0.004

>gnl|CDD|177805 PLN00411, PLN00411, nodulin MtN21 family protein; Provisional

 Score =  237 bits (607), Expect = 6e-76
 Identities = 146/348 (41%), Positives = 211/348 (60%), Gaps = 12/348 (3%)

Query: 8   AMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWS 67
           AM+  E   VG++T+ K A S+G + +  + YS  LA  LL+PS F   R R+ P L+ S
Sbjct: 17  AMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVS 76

Query: 68  IVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQS 127
           I+ +I LLG L     +  Y GIE  +P LASA+ ++TP  TFILAIIFRMEK+  + +S
Sbjct: 77  ILSKIGLLGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERS 136

Query: 128 SQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPL----SNWTIGGIFLAA 183
           S AK  GT+L + GAL+V  Y G  +  A S   L    +  PL    S+W IGG  L  
Sbjct: 137 SVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQLSPPLSSSNSDWLIGGALLTI 196

Query: 184 HSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEK-NPNAWRLRPDIEL 242
             + +++ +I+QA I+ +YPA   V+ + ++ V+I++S + LV EK NP+ W +  DI L
Sbjct: 197 QGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDITL 256

Query: 243 MAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVG 302
           + I   AI   SV  V H+W +R KGP+Y+++FKPL +++A+V G  FL D+LYLG  +G
Sbjct: 257 ITIVTMAIIT-SVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIG 315

Query: 303 AATIALGFYAVIWGQAKEEKMDEDHTEISGFKPSSPCVPLLINKSNTE 350
              I LGFYAV+WG+A EEK  +     SG + +    PLL+N  N +
Sbjct: 316 GILITLGFYAVMWGKANEEK--DQLLSFSGKEKT----PLLLNGKNDQ 357

Length = 358

>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

 Score = 46.8 bits (111), Expect = 7e-06
 Identities = 61/316 (19%), Positives = 105/316 (33%), Gaps = 35/316 (11%)

Query: 7   AAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTW 66
            A++    L        K A+               +A  LL+P   +   +    +   
Sbjct: 10  LALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLP---LLLLEPRGLRPAL 66

Query: 67  SIVCRIFLLGLLSCCGQMFHYF-GIENGSPALASAMIDLTPGFTFILA-IIFRMEKLELR 124
                + LL LL         F  ++  S ++AS +I L P FT +LA ++   E+L L 
Sbjct: 67  RPWLLLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLL 126

Query: 125 VQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAH 184
                  +   VLLI                               LS   +     AA 
Sbjct: 127 QILGILLALAGVLLILLG----------------------GGGGGILSLLGLLLALAAA- 163

Query: 185 SVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMA 244
            ++ A+Y  +   + R      +  L+  +   +L     L     P   R       + 
Sbjct: 164 -LLWALYTALVKRLSR-LGPVTLALLLQLLLALLLLLLFFLSGFGAPILSR-----AWLL 216

Query: 245 IGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAA 304
           + Y  +F+  +  +   +ALR  G   V++   L  V A + G+  LG+ L     +GAA
Sbjct: 217 LLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAA 276

Query: 305 TIALGFYAVIWGQAKE 320
            + LG         + 
Sbjct: 277 LVVLGVLLASLRARRR 292

Length = 292

>gnl|CDD|216178 pfam00892, EamA, EamA-like transporter family

 Score = 38.8 bits (91), Expect = 6e-04
 Identities = 32/131 (24%), Positives = 59/131 (45%), Gaps = 9/131 (6%)

Query: 18  GLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGL 77
            L  V    +    S      Y   +A  LL+    +F  ++    L+   +  +  LGL
Sbjct: 4   ALYFVFSKKLLERISPLTFTAYRFLIAGILLIL--LLFLLRKPFALLSLKAILALLYLGL 61

Query: 78  LS-CCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTV 136
                G + +++ ++  S + AS +  L+P FT IL+++   EKL L+      +  G V
Sbjct: 62  FGTALGYLLYFYALKYVSASNASVITSLSPVFTLILSVLLLGEKLTLK------QLLGIV 115

Query: 137 LLIGGALIVTL 147
           L++ G L++ L
Sbjct: 116 LILLGVLLILL 126

This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Length = 126

>gnl|CDD|216178 pfam00892, EamA, EamA-like transporter family

 Score = 36.8 bits (86), Expect = 0.004
 Identities = 23/130 (17%), Positives = 50/130 (38%), Gaps = 4/130 (3%)

Query: 186 VILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAI 245
           +  A+Y++    ++                +  +   + L   + P A  L     ++A+
Sbjct: 1   LSWALYFVFSKKLLERISPLTFTAY--RFLIAGILLILLLFLLRKPFA--LLSLKAILAL 56

Query: 246 GYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAAT 305
            Y  +F  ++  + + +AL+       S+   L  V  L+  +  LG+ L L   +G   
Sbjct: 57  LYLGLFGTALGYLLYFYALKYVSASNASVITSLSPVFTLILSVLLLGEKLTLKQLLGIVL 116

Query: 306 IALGFYAVIW 315
           I LG   ++ 
Sbjct: 117 ILLGVLLILL 126

This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Length = 126

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	359
PLN00411	358	nodulin MtN21 family protein; Provisional	100.0
PRK11272	292	putative DMT superfamily transporter inner membran	100.0
PRK10532	293	threonine and homoserine efflux system; Provisiona	100.0
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	100.0
PRK11689	295	aromatic amino acid exporter; Provisional	100.0
PRK15430	296	putative chloramphenical resistance permease RarD;	99.98
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.98
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.97
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.96
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.95
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.95
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.95
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.93
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.93
COG2962	293	RarD Predicted permeases [General function predict	99.91
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.89
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.89
KOG2765	416	consensus Predicted membrane protein [Function unk	99.81
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.81
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.73
COG2510	140	Predicted membrane protein [Function unknown]	99.66
KOG1580	337	consensus UDP-galactose transporter related protei	99.65
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.62
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.61
KOG2766	336	consensus Predicted membrane protein [Function unk	99.57
COG2510	140	Predicted membrane protein [Function unknown]	99.56
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.55
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.51
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.48
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.43
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.27
KOG1581	327	consensus UDP-galactose transporter related protei	99.26
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.23
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	99.19
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.17
PF13536	113	EmrE: Multidrug resistance efflux transporter	99.14
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.1
PRK15430	296	putative chloramphenical resistance permease RarD;	99.08
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.07
PLN00411	358	nodulin MtN21 family protein; Provisional	99.05
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.04
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.02
PRK11272	292	putative DMT superfamily transporter inner membran	99.0
PRK13499	345	rhamnose-proton symporter; Provisional	98.99
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	98.99
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.97
PRK11689	295	aromatic amino acid exporter; Provisional	98.92
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.92
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	98.91
KOG1582	367	consensus UDP-galactose transporter related protei	98.91
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	98.89
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.73
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.7
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.69
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	98.65
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.62
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.48
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.47
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	98.47
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.41
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.41
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.38
COG2962	293	RarD Predicted permeases [General function predict	98.3
KOG2922	335	consensus Uncharacterized conserved protein [Funct	98.28
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	98.24
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	98.24
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.21
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	98.0
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.81
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.8
KOG4510	346	consensus Permease of the drug/metabolite transpor	97.8
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	97.64
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.63
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	97.61
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.47
PRK11431	105	multidrug efflux system protein; Provisional	97.35
PRK13499	345	rhamnose-proton symporter; Provisional	97.31
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.3
COG2076	106	EmrE Membrane transporters of cations and cationic	97.29
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	97.26
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.16
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	97.14
KOG2765	416	consensus Predicted membrane protein [Function unk	97.14
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	97.11
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	97.02
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	96.97
PRK09541	110	emrE multidrug efflux protein; Reviewed	96.9
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	96.77
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	96.75
COG2076	106	EmrE Membrane transporters of cations and cationic	96.59
PRK11431	105	multidrug efflux system protein; Provisional	96.55
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	96.44
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	96.37
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	96.13
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	95.7
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	95.55
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	95.47
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	95.46
KOG1581	327	consensus UDP-galactose transporter related protei	95.3
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	94.87
KOG1580	337	consensus UDP-galactose transporter related protei	94.7
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	94.49
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	93.93
KOG2922	335	consensus Uncharacterized conserved protein [Funct	93.23
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	92.57
KOG1443	349	consensus Predicted integral membrane protein [Fun	90.86
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	88.69
KOG4831	125	consensus Unnamed protein [Function unknown]	88.68
PRK06638	198	NADH:ubiquinone oxidoreductase subunit J; Provisio	88.56
PF07168	336	Ureide_permease: Ureide permease; InterPro: IPR009	88.47
KOG4831	125	consensus Unnamed protein [Function unknown]	88.15
PRK02237	109	hypothetical protein; Provisional	85.19
PF02694	107	UPF0060: Uncharacterised BCR, YnfA/UPF0060 family;	80.31
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	80.21

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=100.00  E-value=1.2e-40  Score=312.17  Aligned_cols=337  Identities=41%  Similarity=0.681  Sum_probs=263.5

Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHH
Q 018256            1 MGASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSC   80 (359)
Q Consensus         1 ~~~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   80 (359)
                      |+.+++..|+...++++...++.|.+++++++|..+.++|+.+++++++++++.++|+++.++.+++++....+.|++++
T Consensus        10 ~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g~   89 (358)
T PLN00411         10 REAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLGS   89 (358)
T ss_pred             hccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999999999999998887665533325556888889999999987


Q ss_pred             HHHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHh------hccccceeccccccchhHHHHHhHHHHHHhhcCCCCC
Q 018256           81 CGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFR------MEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPIT  154 (359)
Q Consensus        81 ~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~------~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~  154 (359)
                      ..+.+++.|++|++++.++++.++.|+++.+++++++      |||++      +.+++|++++++|+.++..++++...
T Consensus        90 ~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~------~~~~~G~~l~~~Gv~ll~~~~g~~~~  163 (358)
T PLN00411         90 MYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSS------VAKVMGTILSLIGALVVIFYHGPRVF  163 (358)
T ss_pred             HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhccccc------HHHHHHHHHHHHHHHHHHHccCcccc
Confidence            7778999999999999999999999999999999995      66666      66999999999999998665543211


Q ss_pred             CCC--Ccccc-hhh-hccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHhcC-
Q 018256          155 SAP--SKNKL-INE-LVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEK-  229 (359)
Q Consensus       155 ~~~--~~~~~-~~~-~~~~~~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  229 (359)
                      ..+  .+.+. ..+ ....+..++.+|++++++++++||+|.+++|+..+++++....++++..++.+...+..+..++ 
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~  243 (358)
T PLN00411        164 VASSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKN  243 (358)
T ss_pred             cccccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccC
Confidence            100  00000 000 0011223456799999999999999999999998888756677888888887777776665543 


Q ss_pred             CCCcccccCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHH
Q 018256          230 NPNAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALG  309 (359)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~g  309 (359)
                      +...|....+.....++|.+++ +.++|.+|++++++.+|++++++.+++|+++++++++++||++++.+++|+++|+.|
T Consensus       244 ~~~~~~~~~~~~~~~i~y~~i~-t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~G  322 (358)
T PLN00411        244 NPSVWIIHFDITLITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLG  322 (358)
T ss_pred             CcccceeccchHHHHHHHHHHH-HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHH
Confidence            2333433233334567788875 668999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCcccccccccccccccCCCCCCCccccccCCCcc
Q 018256          310 FYAVIWGQAKEEKMDEDHTEISGFKPSSPCVPLLINKSNTE  350 (359)
Q Consensus       310 i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  350 (359)
                      +++..+.++||.+.+++.   +++++++   |..-+.-|||
T Consensus       323 v~l~~~~~~~~~~~~~~~---~~~~~~~---~~~~~~~~~~  357 (358)
T PLN00411        323 FYAVMWGKANEEKDQLLS---FSGKEKT---PLLLNGKNDQ  357 (358)
T ss_pred             HHHHHhhhhhhhhhcccC---ccccccc---hhhhhccccc
Confidence            999998776664443332   3345556   5555444443

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=100.00  E-value=1.5e-32  Score=253.09  Aligned_cols=278  Identities=17%  Similarity=0.174  Sum_probs=230.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH-HHHHH
Q 018256            6 TAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLS-CCGQM   84 (359)
Q Consensus         6 ~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~   84 (359)
                      ++.++...++||.+++++|.+.+ +++|..++++|+.++.++++++...+++ +.   .+++++......|.++ ..++.
T Consensus        10 ~~~~~~~~~iWg~~~~~~K~~~~-~~~p~~~~~~R~~~a~l~ll~~~~~~~~-~~---~~~~~~~~~~~~g~~~~~~~~~   84 (292)
T PRK11272         10 FGALFALYIIWGSTYLVIRIGVE-SWPPLMMAGVRFLIAGILLLAFLLLRGH-PL---PTLRQWLNAALIGLLLLAVGNG   84 (292)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHhc-cCCHHHHHHHHHHHHHHHHHHHHHHhCC-CC---CcHHHHHHHHHHHHHHHHHHHH
Confidence            45667788999999999999777 8999999999999999998877644322 22   3467778888889887 77888


Q ss_pred             HHHHHh-ccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCCCCCCcccch
Q 018256           85 FHYFGI-ENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLI  163 (359)
Q Consensus        85 ~~~~al-~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~  163 (359)
                      +++.+. ++++++.++++.++.|+++.+++.+ +|||++++      +++|++++++|+.++...+  .           
T Consensus        85 ~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~------~~~~~~la~~Gv~ll~~~~--~-----------  144 (292)
T PRK11272         85 MVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKL------EWLGIAIGLAGIVLLNSGG--N-----------  144 (292)
T ss_pred             HHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchh------HHHHHHHHHHhHHHHhcCc--c-----------
Confidence            999999 9999999999999999999999986 69999955      9999999999998873211  1           


Q ss_pred             hhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHH
Q 018256          164 NELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELM  243 (359)
Q Consensus       164 ~~~~~~~~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (359)
                             .+....|++++++++++||.|.+..||..++ + +...+.+++.++.+...+.....+.+...  ..+...|.
T Consensus       145 -------~~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  213 (292)
T PRK11272        145 -------LSGNPWGAILILIASASWAFGSVWSSRLPLP-V-GMMAGAAEMLAAGVVLLIASLLSGERLTA--LPTLSGFL  213 (292)
T ss_pred             -------cccchHHHHHHHHHHHHHHHHHHHHHhcCCC-c-chHHHHHHHHHHHHHHHHHHHHcCCcccc--cCCHHHHH
Confidence                   1123579999999999999999999987543 3 45667888888888877776544332211  11223588


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcCcc
Q 018256          244 AIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQAK  319 (359)
Q Consensus       244 ~~~~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~~~  319 (359)
                      .+++.++++++++|.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++|+.|+++..+.+++
T Consensus       214 ~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~~  289 (292)
T PRK11272        214 ALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKYL  289 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHhh
Confidence            8999999999999999999999999999999999999999999999999999999999999999999998876554

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=100.00  E-value=2.7e-32  Score=251.46  Aligned_cols=281  Identities=14%  Similarity=0.065  Sum_probs=225.4

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHH
Q 018256            2 GASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCC   81 (359)
Q Consensus         2 ~~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   81 (359)
                      +.+++..+++++++|+.++.+.|++.+ +.+|..++++|++++.++++++.  ++++.   +.++++++..+..|++.+.
T Consensus        10 ~~~~~~~~~la~~~~~~~~~~~K~~~~-~~~~~~~~~~R~~~a~l~l~~~~--~~~~~---~~~~~~~~~~~~~g~~~~~   83 (293)
T PRK10532         10 VWLPILLLLIAMASIQSGASLAKSLFP-LVGAPGVTALRLALGTLILIAIF--KPWRL---RFAKEQRLPLLFYGVSLGG   83 (293)
T ss_pred             cchHHHHHHHHHHHHHhhHHHHHHHHH-HcCHHHHHHHHHHHHHHHHHHHH--hHHhc---cCCHHHHHHHHHHHHHHHH
Confidence            578899999999999999999999888 69999999999999998887654  22222   2456777888888988888


Q ss_pred             HHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCCCCCCccc
Q 018256           82 GQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNK  161 (359)
Q Consensus        82 ~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~  161 (359)
                      .+.++++|+++++++.++++.++.|+++.+++    +||+.        +..++.++++|+.++.. .+..         
T Consensus        84 ~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~--------~~~~~~i~~~Gv~li~~-~~~~---------  141 (293)
T PRK10532         84 MNYLFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPV--------DFVWVVLAVLGLWFLLP-LGQD---------  141 (293)
T ss_pred             HHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChH--------HHHHHHHHHHHHheeee-cCCC---------
Confidence            88999999999999999999999999999886    25554        45667888999988742 1111         


Q ss_pred             chhhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchh
Q 018256          162 LINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIE  241 (359)
Q Consensus       162 ~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (359)
                              .++....|++++++++++||.|.++.||..++.+ +... .+...++.+++.+.....+. ...++   ...
T Consensus       142 --------~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~~-~~~~-~~~~~~~~~~l~~~~~~~~~-~~~~~---~~~  207 (293)
T PRK10532        142 --------VSHVDLTGAALALGAGACWAIYILSGQRAGAEHG-PATV-AIGSLIAALIFVPIGALQAG-EALWH---WSI  207 (293)
T ss_pred             --------cccCChHHHHHHHHHHHHHHHHHHHHHHHhccCC-chHH-HHHHHHHHHHHHHHHHHccC-cccCC---HHH
Confidence                    1222357999999999999999999999877766 6655 45666666666666553322 11111   123


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcCcccc
Q 018256          242 LMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQAKEE  321 (359)
Q Consensus       242 ~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~~~~~  321 (359)
                      |...+++|++++.++|.+|++++++.++++++.+.+++|+++.+++++++||+++..+++|+++|++|+....+..+|+.
T Consensus       208 ~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~~~  287 (293)
T PRK10532        208 LPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRREP  287 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence            55667999999999999999999999999999999999999999999999999999999999999999999988776654


Q ss_pred             ccc
Q 018256          322 KMD  324 (359)
Q Consensus       322 ~~~  324 (359)
                      |.+
T Consensus       288 ~~~  290 (293)
T PRK10532        288 KIK  290 (293)
T ss_pred             CCC
Confidence            443

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=100.00  E-value=9.6e-32  Score=248.59  Aligned_cols=280  Identities=18%  Similarity=0.129  Sum_probs=216.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH-HHH
Q 018256            4 SVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLS-CCG   82 (359)
Q Consensus         4 ~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~   82 (359)
                      +..+..++++++||.+++++|.+.+ +++|..+.++|++++++.+.++.  + ++    +.++   +.....|++. ...
T Consensus         4 ~~~l~~l~~~~~Wg~~~~~~k~~~~-~~~p~~~~~~R~~~a~~~l~~~~--~-~~----~~~~---~~~~~~g~~~~~~~   72 (299)
T PRK11453          4 KDGVLALLVVVVWGLNFVVIKVGLH-NMPPLMLAGLRFMLVAFPAIFFV--A-RP----KVPL---NLLLGYGLTISFGQ   72 (299)
T ss_pred             HHHHHHHHHHHHHhhhHHHHHHHHh-cCCHHHHHHHHHHHHHHHHHHHh--c-CC----CCch---HHHHHHHHHHHHHH
Confidence            4456788899999999999999877 79999999999999877665433  2 11    1222   2344456655 556


Q ss_pred             HHHHHHHhcc-CCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCCCCCCccc
Q 018256           83 QMFHYFGIEN-GSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNK  161 (359)
Q Consensus        83 ~~~~~~al~~-~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~  161 (359)
                      ..+++.++++ .+++.++++.++.|+++.+++++++|||++++      +++|++++++|+.++.. .+..         
T Consensus        73 ~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~------~~~~~~l~~~Gv~ll~~-~~~~---------  136 (299)
T PRK11453         73 FAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGK------QLAGIALAIFGVLVLIE-DSLN---------  136 (299)
T ss_pred             HHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHH------HHHHHHHHHHhHHHhcc-ccCC---------
Confidence            6678889998 57889999999999999999999999999955      99999999999988842 1100         


Q ss_pred             chhhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCc--hHHHHHHHHHHHHHHHHHHHHhcCCC---Ccccc
Q 018256          162 LINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAE--LMVTLICSIFVTILSSAVSLVAEKNP---NAWRL  236 (359)
Q Consensus       162 ~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~  236 (359)
                              +......|+++++.++++|+.|.+++||..++.+++  .....+....+.+.........+.+.   ..+..
T Consensus       137 --------~~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (299)
T PRK11453        137 --------GQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVT  208 (299)
T ss_pred             --------CcchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhcc
Confidence                    122235799999999999999999999986654422  33345555555444444433333321   11111


Q ss_pred             cCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhc
Q 018256          237 RPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWG  316 (359)
Q Consensus       237 ~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~  316 (359)
                      .+...|..++|.++++++++|.+|++++++.++.+++.+.+++|+++.+++++++||+++..+++|+++|++|+++..+.
T Consensus       209 ~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~  288 (299)
T PRK11453        209 IDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFG  288 (299)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcc
Confidence            22245889999999999999999999999999999999999999999999999999999999999999999999988876


Q ss_pred             Cc
Q 018256          317 QA  318 (359)
Q Consensus       317 ~~  318 (359)
                      ++
T Consensus       289 ~~  290 (299)
T PRK11453        289 LR  290 (299)
T ss_pred             hh
Confidence            65

>PRK11689 aromatic amino acid exporter; Provisional

Probab=100.00  E-value=2.8e-32  Score=251.62  Aligned_cols=284  Identities=13%  Similarity=0.073  Sum_probs=212.4

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH-H
Q 018256            2 GASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLS-C   80 (359)
Q Consensus         2 ~~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~   80 (359)
                      +.+++++++.++++||.+++.+|.+.+ +++|..+.++|+.++.++++++.   ++++. ++.+    ++.++.+.++ +
T Consensus         2 ~~~~~l~~l~a~~~Wg~~~~~~k~~~~-~~~P~~~~~~R~~~a~l~l~~~~---~~~~~-~~~~----~~~~~~~~l~~~   72 (295)
T PRK11689          2 SQKATLIGLIAILLWSTMVGLIRGVSE-SLGPVGGAAMIYSVSGLLLLLTV---GFPRL-RQFP----KRYLLAGGLLFV   72 (295)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHHc-cCChHHHHHHHHHHHHHHHHHHc---ccccc-cccc----HHHHHHHhHHHH
Confidence            567889999999999999999999777 79999999999999998887542   11111 1111    2233444445 7


Q ss_pred             HHHHHHHHHhc----cCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCCCC
Q 018256           81 CGQMFHYFGIE----NGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSA  156 (359)
Q Consensus        81 ~~~~~~~~al~----~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~  156 (359)
                      .+..+++.|++    +.+++.++++.++.|+++.+++++++|||++++      +++|++++++|++++...+ ...+..
T Consensus        73 ~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~------~~~g~~l~~~Gv~li~~~~-~~~~~~  145 (295)
T PRK11689         73 SYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWL------LIPGLLLALAGVAWVLGGD-NGLSLA  145 (295)
T ss_pred             HHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHH------HHHHHHHHHHhHhheecCC-ccchhh
Confidence            77788888775    457788889999999999999999999999955      9999999999998884321 111000


Q ss_pred             CCcccchhhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 018256          157 PSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRL  236 (359)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (359)
                              +. ..+......|++++++++++||.|.++.||..++.+ +.....   ..+.+.+.+.....+.....+  
T Consensus       146 --------~~-~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~~-~~~~~~---~~~~~~l~~~~~~~~~~~~~~--  210 (295)
T PRK11689        146 --------EL-INNIASNPLSYGLAFIGAFIWAAYCNVTRKYARGKN-GITLFF---ILTALALWIKYFLSPQPAMVF--  210 (295)
T ss_pred             --------hh-hhccccChHHHHHHHHHHHHHHHHHHHHhhccCCCC-chhHHH---HHHHHHHHHHHHHhcCccccC--
Confidence                    00 001112346999999999999999999999876665 554322   223333333333222211111  


Q ss_pred             cCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhc
Q 018256          237 RPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWG  316 (359)
Q Consensus       237 ~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~  316 (359)
                      . ...|..+++.++ +++++|.+|++++|+.++++++.+.+++|+++++++++++||+++..+++|+++|+.|+++....
T Consensus       211 ~-~~~~~~l~~~~~-~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~  288 (295)
T PRK11689        211 S-LPAIIKLLLAAA-AMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLA  288 (295)
T ss_pred             C-HHHHHHHHHHHH-HHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhh
Confidence            1 234677778775 78999999999999999999999999999999999999999999999999999999999888765


Q ss_pred             Cc
Q 018256          317 QA  318 (359)
Q Consensus       317 ~~  318 (359)
                      ++
T Consensus       289 ~~  290 (295)
T PRK11689        289 TR  290 (295)
T ss_pred             Hh
Confidence            44

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.98  E-value=1.4e-30  Score=240.30  Aligned_cols=277  Identities=15%  Similarity=0.090  Sum_probs=205.6

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCC-CCCC-CHHHHHHHHHHHHHH
Q 018256            2 GASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRT-PPQL-TWSIVCRIFLLGLLS   79 (359)
Q Consensus         2 ~~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~-~~~~-~~~~~~~~~~~g~~~   79 (359)
                      +.++++.+++++++||.+++..|. .+ +++|.++.++|++++.+++.++...+++... .++. +++++.. ...+.++
T Consensus         6 ~~~g~~~~l~a~~~wg~~~~~~k~-~~-~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~   82 (296)
T PRK15430          6 TRQGVLLALAAYFIWGIAPAYFKL-IY-YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFM-LAVSAVL   82 (296)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHH-hc-CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHH-HHHHHHH
Confidence            568899999999999999999998 45 7999999999999999887766544332111 0011 3333333 3355555


Q ss_pred             -HHHHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCCCCCC
Q 018256           80 -CCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPS  158 (359)
Q Consensus        80 -~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~  158 (359)
                       +.++.++++|+++++++.++++.++.|+++.+++++++|||++++      ++.|++++++|++++...+         
T Consensus        83 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~------~~~g~~l~~~Gv~li~~~~---------  147 (296)
T PRK15430         83 IGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRM------QWLAVILAICGVLVQLWTF---------  147 (296)
T ss_pred             HHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHH------HHHHHHHHHHHHHHHHHHc---------
Confidence             889999999999999999999999999999999999999999955      9999999999999884221         


Q ss_pred             cccchhhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCC-CchHHHHHHHHHHHHHHHHHHHHhcCCCCccccc
Q 018256          159 KNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYP-AELMVTLICSIFVTILSSAVSLVAEKNPNAWRLR  237 (359)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (359)
                                  ++.    .+++++++++||.|.++.|+..++.. +....+.+...++.+...+.   .......+...
T Consensus       148 ------------~~~----~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~  208 (296)
T PRK15430        148 ------------GSL----PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAI---ADSSTSHMGQN  208 (296)
T ss_pred             ------------CCc----cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHH---ccCCcccccCC
Confidence                        111    14678899999999999998643221 12223333443433332111   11111112211


Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhc
Q 018256          238 PDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWG  316 (359)
Q Consensus       238 ~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~  316 (359)
                      +...+..+.+.++ .+.++|.+|++++++.++.+++.+.+++|+++++++++++||++++.+++|+++|++|+.+....
T Consensus       209 ~~~~~~~~~~~g~-~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~  286 (296)
T PRK15430        209 PMSLNLLLIAAGI-VTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMD  286 (296)
T ss_pred             cHHHHHHHHHHHH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            1112333444455 67899999999999999999999999999999999999999999999999999999888877754

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.98  E-value=3.1e-30  Score=233.87  Aligned_cols=257  Identities=19%  Similarity=0.219  Sum_probs=215.0

Q ss_pred             HHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHhccCC
Q 018256           16 DVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLS-CCGQMFHYFGIENGS   94 (359)
Q Consensus        16 ~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~al~~~~   94 (359)
                      ||.+++..|.+++++.|+....+.|.+.+.+++.+....  +  +    +++++.+....|.++ ++++.+++.|+++++
T Consensus         1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~--~--~----~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~   72 (260)
T TIGR00950         1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRR--R--P----PLKRLLRLLLLGALQIGVFYVLYFVAVKRLP   72 (260)
T ss_pred             CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHh--c--c----CHhHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            899999999988878899999999999988887665422  2  1    234556677777777 999999999999999


Q ss_pred             cchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCCCCCCcccchhhhccCCCCch
Q 018256           95 PALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNW  174 (359)
Q Consensus        95 ~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (359)
                      ++.++++.++.|+++.+++.+++|||++++      ++.|++++++|+.++.. ++                   +.+..
T Consensus        73 ~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~------~~~gi~i~~~Gv~li~~-~~-------------------~~~~~  126 (260)
T TIGR00950        73 VGEAALLLYLAPLYVTLLSDLMGKERPRKL------VLLAAVLGLAGAVLLLS-DG-------------------NLSIN  126 (260)
T ss_pred             hhhhHHHHhhhHHHHHHHHHHHccCCCcHH------HHHHHHHHHHhHHhhcc-CC-------------------ccccc
Confidence            999999999999999999999999999955      99999999999988742 21                   12234


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhhCC-CchHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHH
Q 018256          175 TIGGIFLAAHSVILAIYYIVQAWIVRDYP-AELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAV  253 (359)
Q Consensus       175 ~~G~~~~l~a~~~~a~~~vl~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  253 (359)
                      ..|++++++++++|+.+.++.|+..++.+ ++.....+.+.++.+...+..+..++.. .+   ....|..+++.+++++
T Consensus       127 ~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~  202 (260)
T TIGR00950       127 PAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP-QA---LSLQWGALLYLGLIGT  202 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-Cc---chHHHHHHHHHHHHHH
Confidence            68999999999999999999999887655 1234455678888888887776543322 11   2235777889999999


Q ss_pred             HHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHH
Q 018256          254 SVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGF  310 (359)
Q Consensus       254 ~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi  310 (359)
                      +++|.+|++++++.++.+++.+.+++|+++++++++++||+++..+++|+++++.|+
T Consensus       203 ~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       203 ALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            999999999999999999999999999999999999999999999999999999886

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.97  E-value=2.5e-29  Score=232.96  Aligned_cols=273  Identities=12%  Similarity=0.123  Sum_probs=213.0

Q ss_pred             HHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchh
Q 018256           19 LNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALA   98 (359)
Q Consensus        19 ~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a   98 (359)
                      ..+.+|+++++...|..+.++|+..+.+.+.+. +....+++ ++.+++++++.+..|++++.+..+.+.|++|++++.+
T Consensus        17 ~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~s~s~~   94 (302)
T TIGR00817        17 FNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLS-WSSGLPKR-LKISSALLKLLLPVAIVHTIGHVTSNVSLSKVAVSFT   94 (302)
T ss_pred             HHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHH-HHhCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence            346899988854779999999999887776543 11122223 5578899999999999998889999999999999999


Q ss_pred             hhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCCCCCCcccchhhhccCCCCchhHHH
Q 018256           99 SAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGG  178 (359)
Q Consensus        99 ~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~  178 (359)
                      +++.++.|+++.+++++++|||++++      ++.|++++++|+.+.. .+                    +.+....|+
T Consensus        95 ~li~~~~Pv~~~ll~~~~~~e~~~~~------~~~~l~l~~~Gv~l~~-~~--------------------~~~~~~~G~  147 (302)
T TIGR00817        95 HTIKAMEPFFSVVLSAFFLGQEFPST------LWLSLLPIVGGVALAS-DT--------------------ELSFNWAGF  147 (302)
T ss_pred             HHHHhcchHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHhhhc-CC--------------------cccccHHHH
Confidence            99999999999999999999999955      9999999999997652 11                    122235799


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHh--hCCCchHHHHHHHHHHHHHHHHHHHHhcCCCC---cccc-----cCchhHHHHHHH
Q 018256          179 IFLAAHSVILAIYYIVQAWIVR--DYPAELMVTLICSIFVTILSSAVSLVAEKNPN---AWRL-----RPDIELMAIGYS  248 (359)
Q Consensus       179 ~~~l~a~~~~a~~~vl~k~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-----~~~~~~~~~~~~  248 (359)
                      +++++++++|+.|.++.||..+  +.+ +...+.+++..+.+.+.+.....++...   .+..     .....+...+..
T Consensus       148 ~~~l~a~~~~a~~~v~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (302)
T TIGR00817       148 LSAMISNITFVSRNIFSKKAMTIKSLD-KTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVA  226 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhccCCCC-cccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHH
Confidence            9999999999999999999887  566 8999999999999999998865543211   1100     000111112222


Q ss_pred             HHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcCcccc
Q 018256          249 AIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQAKEE  321 (359)
Q Consensus       249 g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~~~~~  321 (359)
                      +..+....+.++++++++.+|++.++..+++|++++++|++++||+++..+++|+++++.|++++.+.|.||+
T Consensus       227 ~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~~~~  299 (302)
T TIGR00817       227 AMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQKP  299 (302)
T ss_pred             HHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhccCc
Confidence            2212222223555899999999999999999999999999999999999999999999999999997665443

specificities overlap.

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.96  E-value=5.4e-27  Score=215.03  Aligned_cols=276  Identities=15%  Similarity=0.135  Sum_probs=200.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 018256            5 VTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQM   84 (359)
Q Consensus         5 ~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   84 (359)
                      ..++.++++++|+...+..|...+ .-++  ..+++.....+++.|+...+.++...+..+++.+......++.+..++.
T Consensus         2 ~~~~~~~aa~~~a~~~~~~k~~~~-~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (281)
T TIGR03340         2 ALTLVVFSALMHAGWNLMAKSHAD-KEPD--FLWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFL   78 (281)
T ss_pred             cHHHHHHHHHHHHHHHHHHhhcCC-chhH--HHHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHH
Confidence            356788999999999999996444 3233  3477777777777776654321221122334444444455555599999


Q ss_pred             HHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCCCCCCcccchh
Q 018256           85 FHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLIN  164 (359)
Q Consensus        85 ~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~  164 (359)
                      +++.|+++.+++.++.+.++.|+++.+++++++|||++++      +++|+.+++.|++++...+ .             
T Consensus        79 ~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~------~~~g~~~~~~Gv~ll~~~~-~-------------  138 (281)
T TIGR03340        79 GLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPL------AWLGILIITLGLLVLGLSR-F-------------  138 (281)
T ss_pred             HHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHH------HHHHHHHHHHHHHHHhccc-c-------------
Confidence            9999999999999999999999999999999999999955      9999999999999874211 1             


Q ss_pred             hhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCch---HHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchh
Q 018256          165 ELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAEL---MVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIE  241 (359)
Q Consensus       165 ~~~~~~~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (359)
                            ......|+.++++++++|+.|.++.|+..++.++..   ....+..........+.....+..  .+. .....
T Consensus       139 ------~~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~  209 (281)
T TIGR03340       139 ------AQHRRKAYAWALAAALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGR--SMF-PYARQ  209 (281)
T ss_pred             ------cccchhHHHHHHHHHHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHHHHHhcc--chh-hhHHH
Confidence                  112235788999999999999999887654433111   122223322211111221111111  111 11223


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHH
Q 018256          242 LMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYA  312 (359)
Q Consensus       242 ~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l  312 (359)
                      ++..++.+.+.+.++|.+|++++++.++++++.+.+++|+++++++++++||+++..+++|+++|++|+++
T Consensus       210 ~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       210 ILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            56677888889999999999999999999999999999999999999999999999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.95  E-value=2.5e-26  Score=216.27  Aligned_cols=280  Identities=15%  Similarity=0.136  Sum_probs=217.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCC-hHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCC--HHHHHHHHHHHHHHHHH
Q 018256            6 TAAMVTLEFLDVGLNTVTKAAMSRGAS-HFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLT--WSIVCRIFLLGLLSCCG   82 (359)
Q Consensus         6 ~~~~l~~~~~~g~~~~~~k~~~~~~~~-p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~   82 (359)
                      .++.++=-.+-.......|.+++ .++ |+.+..+|++++.++...... .+.+++ |+++  +++++..+..|+++...
T Consensus        51 ~~~~~~wy~~s~~~~~~nK~vl~-~~~~P~~l~~~~~~~~~l~~~~~~~-~~~~~~-~~~~~~~~~~~~llp~gl~~~~~  127 (350)
T PTZ00343         51 ALLFLTWYALNVLYVVDNKLALN-MLPLPWTISSLQLFVGWLFALLYWA-TGFRKI-PRIKSLKLFLKNFLPQGLCHLFV  127 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH-hCChhHHHHHHHHHHHHHHHHHHHH-hCCCCC-CCCCCHHHHHHHHHHHHHHHHHH
Confidence            33333334445556788999888 689 999999999999876544322 222222 3443  45778899999999656


Q ss_pred             HHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCCCCCCcccc
Q 018256           83 QMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKL  162 (359)
Q Consensus        83 ~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~  162 (359)
                      +...+.|+++++++.++++..+.|+++++++++++|||++++      ++.++++++.|+.+.+..+             
T Consensus       128 ~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~------~~l~l~l~v~Gv~l~~~~~-------------  188 (350)
T PTZ00343        128 HFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLY------AYLSLIPIVGGVALASVKE-------------  188 (350)
T ss_pred             HHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHH------HHHHHHHHHHHHHheeccc-------------
Confidence            777889999999999999999999999999999999999955      9999999999999974211             


Q ss_pred             hhhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCC------CchHHHHHHHHHHHHHHHHHHHHhcCCC--Ccc
Q 018256          163 INELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYP------AELMVTLICSIFVTILSSAVSLVAEKNP--NAW  234 (359)
Q Consensus       163 ~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~  234 (359)
                              .+....|++++++++++++.|+++.|+..++.+      ++.....++.+.+.++++|+....|...  ..+
T Consensus       189 --------~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~  260 (350)
T PTZ00343        189 --------LHFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVW  260 (350)
T ss_pred             --------chhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence                    223467999999999999999999999876532      2555666778899999998886554321  111


Q ss_pred             c----ccCchhHHHHHHHHHHHHHHHHHHHHH----HHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHH
Q 018256          235 R----LRPDIELMAIGYSAIFAVSVRSVFHTW----ALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATI  306 (359)
Q Consensus       235 ~----~~~~~~~~~~~~~g~~~~~~~~~~~~~----~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~li  306 (359)
                      .    ......+..+++. ++.+++.|.+|+.    ++++.+|.+.++..+++|+++++++++++||++++.+++|++++
T Consensus       261 ~~~~~~~~~~~~~~~l~~-i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~li  339 (350)
T PTZ00343        261 TNYTANMTNYTKGIIIFK-IFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVA  339 (350)
T ss_pred             HHhhhcccccchHHHHHH-HHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHH
Confidence            0    0001112334443 4567899999995    99999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhc
Q 018256          307 ALGFYAVIWG  316 (359)
Q Consensus       307 i~gi~l~~~~  316 (359)
                      +.|++++++.
T Consensus       340 i~Gv~lYs~~  349 (350)
T PTZ00343        340 ILGALLYSLF  349 (350)
T ss_pred             HHHHHHHhhc
Confidence            9999998865

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.95  E-value=1.2e-25  Score=206.83  Aligned_cols=295  Identities=15%  Similarity=0.170  Sum_probs=225.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCC-hHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 018256            8 AMVTLEFLDVGLNTVTKAAMSRGAS-HFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFH   86 (359)
Q Consensus         8 ~~l~~~~~~g~~~~~~k~~~~~~~~-p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~   86 (359)
                      .-=..+++-..+...++...+.+.+ |....++-+..-.++..+....+++.++..+.-+++++++++.+++...++++.
T Consensus        17 lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~aN~~~   96 (334)
T PF06027_consen   17 LGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVEANYLV   96 (334)
T ss_pred             HHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHHHHHHHH
Confidence            3334556666777777764444444 666666666555555555544443332212334567788889999999999999


Q ss_pred             HHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCCCCCCcccchhhh
Q 018256           87 YFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINEL  166 (359)
Q Consensus        87 ~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~  166 (359)
                      +.|++|++.+.++++..+.-+++++++++++|+|.++      .+++|+++++.|+.++...|....+            
T Consensus        97 v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~------~~~~gv~i~i~Gv~lv~~sD~~~~~------------  158 (334)
T PF06027_consen   97 VLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSW------FHILGVLICIAGVVLVVVSDVLSGS------------  158 (334)
T ss_pred             HHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhH------HHHHHHHHHHhhhhheeeecccccc------------
Confidence            9999999999999999999999999999999999995      5999999999999988654422111            


Q ss_pred             ccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHhcCC-CCcccccCchhHHHH
Q 018256          167 VQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKN-PNAWRLRPDIELMAI  245 (359)
Q Consensus       167 ~~~~~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  245 (359)
                      .+++..+...|+++++++++.||.++++.++..++.+ ..++.....+++.+++.+.....|.. ......++.. +..+
T Consensus       159 ~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~~-~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~-~~~~  236 (334)
T PF06027_consen  159 DSSSGSNPILGDLLALLGAILYAVSNVLEEKLVKKAP-RVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQV-IGLL  236 (334)
T ss_pred             cCCCCCccchhHHHHHHHHHHHHHHHHHHHHhcccCC-HHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhh-HHHH
Confidence            1123457789999999999999999999999999887 88889999999999998887766653 2222222211 2222


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcCcccccc
Q 018256          246 GYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQAKEEKM  323 (359)
Q Consensus       246 ~~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~~~~~~~  323 (359)
                      +. ..++..+.|.+....++..+|+...+-..+..+++++++++++|+++++..++|.++|++|++++...++++.++
T Consensus       237 v~-~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~~~~  313 (334)
T PF06027_consen  237 VG-YALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPEEEA  313 (334)
T ss_pred             HH-HHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCccccc
Confidence            22 233567778888899999999999999999999999999999999999999999999999999999876655443

Some of the sequences in this family are annotated as putative membrane proteins.

>TIGR00688 rarD rarD protein

Probab=99.95  E-value=1.1e-25  Score=203.58  Aligned_cols=249  Identities=10%  Similarity=0.037  Sum_probs=184.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccC----CCCCCCHHH-HHHHHHHHHH
Q 018256            4 SVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKR----TPPQLTWSI-VCRIFLLGLL   78 (359)
Q Consensus         4 ~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~----~~~~~~~~~-~~~~~~~g~~   78 (359)
                      |+++++++++++||.+++++|. .+ +++|.+++++|++++.+++.++...+++++    +.++.++++ +..+...|++
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~-~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   79 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LK-PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL   79 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hc-cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence            5889999999999999999998 55 699999999999999988776654433211    101122222 3456677877


Q ss_pred             HHHHHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCCCCCC
Q 018256           79 SCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPS  158 (359)
Q Consensus        79 ~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~  158 (359)
                      .+.++.++++|++++++++++++.++.|+++.+++++++|||++++      ++++++++++|++++...+         
T Consensus        80 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~------~~l~~~~~~~Gv~li~~~~---------  144 (256)
T TIGR00688        80 IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRF------QFIAVIIATLGVISNIVLK---------  144 (256)
T ss_pred             HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH------HHHHHHHHHHHHHHHHHHc---------
Confidence            8999999999999999999999999999999999999999999955      9999999999998874321         


Q ss_pred             cccchhhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCcccccC
Q 018256          159 KNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRP  238 (359)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (359)
                                  .+..    .++++++++||.|.+..|+..++ + ....... .+...+...+.....+... ....++
T Consensus       145 ------------~~~~----~~~l~aa~~~a~~~i~~~~~~~~-~-~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~  204 (256)
T TIGR00688       145 ------------GSLP----WEALVLAFSFTAYGLIRKALKNT-D-LAGFCLE-TLSLMPVAIYYLLQTDFAT-VQQTNP  204 (256)
T ss_pred             ------------CCch----HHHHHHHHHHHHHHHHHhhcCCC-C-cchHHHH-HHHHHHHHHHHHHHhccCc-ccccCc
Confidence                        1111    35788999999999999987543 3 2222221 1222222222211111111 111112


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHH
Q 018256          239 DIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAF  290 (359)
Q Consensus       239 ~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~  290 (359)
                      ...|..+++.|++ +.++|.++++++++.++++++.+.|++|+++++++.+.
T Consensus       205 ~~~~~~l~~~g~~-t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       205 FPIWLLLVLAGLI-TGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             hhHHHHHHHHHHH-HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            2357788888875 88999999999999999999999999999999999864

This uncharacterized protein is predicted to have many membrane-spanning domains.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.93  E-value=2.4e-23  Score=191.15  Aligned_cols=279  Identities=21%  Similarity=0.263  Sum_probs=211.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccC-CCCCCCHHHHHHHHHHHHHH-H
Q 018256            3 ASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKR-TPPQLTWSIVCRIFLLGLLS-C   80 (359)
Q Consensus         3 ~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~-~   80 (359)
                      .......++.++.|+.+....|...++..++....+.|.+.+.+...+..  .+++. . .+.. ++.++..+.+.++ .
T Consensus         6 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~-~~~~~~~~~~~~~~~   81 (292)
T COG0697           6 LLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLL--LLEPRGL-RPAL-RPWLLLLLLALLGLA   81 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHH--Hhhcccc-cccc-cchHHHHHHHHHHHH
Confidence            45667788888999999999999666336777777779998888743332  22211 1 1111 1134455555555 9


Q ss_pred             HHHHHHHHHhccCCcchhhhhhccchHHHHHHHH-HHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCCCCCCc
Q 018256           81 CGQMFHYFGIENGSPALASAMIDLTPGFTFILAI-IFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSK  159 (359)
Q Consensus        81 ~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~-l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~  159 (359)
                      ..+.+++.++++++++.++.+.++.|+++.+++. +++|||++++      ++.++++++.|++++...++..       
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~------~~~~~~~~~~Gv~lv~~~~~~~-------  148 (292)
T COG0697          82 LPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLL------QILGILLALAGVLLILLGGGGG-------  148 (292)
T ss_pred             HHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHH------HHHHHHHHHHhHHheecCCCcc-------
Confidence            9999999999999999999999999999999996 7779999954      9999999999999984322110       


Q ss_pred             ccchhhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHH-HHHHHHHHHHHHHHHHhcCCCCcccccC
Q 018256          160 NKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTL-ICSIFVTILSSAVSLVAEKNPNAWRLRP  238 (359)
Q Consensus       160 ~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (359)
                                ... ...|+.+++.+++++|.+.+..|+.. +.+ +..... +..........+... .+.+    ....
T Consensus       149 ----------~~~-~~~g~~~~l~a~~~~a~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~  210 (292)
T COG0697         149 ----------GIL-SLLGLLLALAAALLWALYTALVKRLS-RLG-PVTLALLLQLLLALLLLLLFFL-SGFG----APIL  210 (292)
T ss_pred             ----------hhH-HHHHHHHHHHHHHHHHHHHHHHHHhc-CCC-hHHHHHHHHHHHHHHHHHHHHh-cccc----ccCC
Confidence                      011 57899999999999999999999887 444 555555 444311111111111 1111    1112


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhc
Q 018256          239 DIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWG  316 (359)
Q Consensus       239 ~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~  316 (359)
                      ...+..+.+.|++++++++.++++++++.++..++.+.+++|+++.+++++++||+++..+++|+++++.|+.+...+
T Consensus       211 ~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         211 SRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            235788889999999999999999999999999999999999999999999999999999999999999999998877

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.93  E-value=1.5e-23  Score=179.23  Aligned_cols=275  Identities=14%  Similarity=0.079  Sum_probs=226.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 018256            5 VTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQM   84 (359)
Q Consensus         5 ~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   84 (359)
                      ++..++.+.+.-=....+.|..++ .++|...+.+|..++++++.++.    |+.+ .++++++++.....|+..+..|.
T Consensus        13 p~~~ll~amvsiq~Gas~Ak~LFP-~vG~~g~t~lRl~~aaLIll~l~----RPwr-~r~~~~~~~~~~~yGvsLg~MNl   86 (292)
T COG5006          13 PILALLVAMVSIQSGASFAKSLFP-LVGAAGVTALRLAIAALILLALF----RPWR-RRLSKPQRLALLAYGVSLGGMNL   86 (292)
T ss_pred             cHHHHHHHHHHHHhhHHHHHHHcc-ccChhhHHHHHHHHHHHHHHHHh----hHHH-hccChhhhHHHHHHHHHHHHHHH
Confidence            567777776666666778888788 79999999999999999986543    2333 45889999999999999999999


Q ss_pred             HHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCCCCCCcccchh
Q 018256           85 FHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLIN  164 (359)
Q Consensus        85 ~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~  164 (359)
                      +||.+++.+|.+.+..+.++-|+...+++-    .|..        +.+-+.+++.|..++. ..++.            
T Consensus        87 ~FY~si~riPlGiAVAiEF~GPL~vA~~~s----Rr~~--------d~vwvaLAvlGi~lL~-p~~~~------------  141 (292)
T COG5006          87 LFYLSIERIPLGIAVAIEFTGPLAVALLSS----RRLR--------DFVWVALAVLGIWLLL-PLGQS------------  141 (292)
T ss_pred             HHHHHHHhccchhhhhhhhccHHHHHHHhc----cchh--------hHHHHHHHHHHHHhhe-eccCC------------
Confidence            999999999999999999999998888742    3333        8888899999998884 22221            


Q ss_pred             hhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHhcCC-CCcccccCchhHH
Q 018256          165 ELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKN-PNAWRLRPDIELM  243 (359)
Q Consensus       165 ~~~~~~~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  243 (359)
                           ....+..|..+++.++.+|+.|.+..||..+..+ ...-+...+.++.++..|+......+ ...+.     -..
T Consensus       142 -----~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~-g~~g~a~gm~vAaviv~Pig~~~ag~~l~~p~-----ll~  210 (292)
T COG5006         142 -----VWSLDPVGVALALGAGACWALYIVLGQRAGRAEH-GTAGVAVGMLVAALIVLPIGAAQAGPALFSPS-----LLP  210 (292)
T ss_pred             -----cCcCCHHHHHHHHHHhHHHHHHHHHcchhcccCC-CchHHHHHHHHHHHHHhhhhhhhcchhhcChH-----HHH
Confidence                 2445678999999999999999999999886655 77788999999999999998733222 22222     244


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcCcccc
Q 018256          244 AIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQAKEE  321 (359)
Q Consensus       244 ~~~~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~~~~~  321 (359)
                      .-+..+++++.+.|.+.+.+++|.+..+.+.+..+||.++.+.|++++||++|..||+|.++|+++..-..+..+|+.
T Consensus       211 laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~~~~  288 (292)
T COG5006         211 LALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTARKPA  288 (292)
T ss_pred             HHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccCCCC
Confidence            556778999999999999999999999999999999999999999999999999999999999988776666555543

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.91  E-value=6.3e-22  Score=173.84  Aligned_cols=280  Identities=12%  Similarity=0.070  Sum_probs=222.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCC--CCCHHHHHHHHHHHHHHH
Q 018256            3 ASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPP--QLTWSIVCRIFLLGLLSC   80 (359)
Q Consensus         3 ~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~   80 (359)
                      .++++..+.+.++||..+...|. ++ ..++.++...|..-+..++..+....++.+...  ..+++.+....+.+++..
T Consensus         6 ~~Gil~~l~Ay~lwG~lp~y~kl-l~-~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li~   83 (293)
T COG2962           6 RKGILLALLAYLLWGLLPLYFKL-LE-PLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLIG   83 (293)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHH-Hc-cCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHHH
Confidence            57899999999999999999998 67 799999999999999988877665554432211  234566677778888889


Q ss_pred             HHHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCCCCCCcc
Q 018256           81 CGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKN  160 (359)
Q Consensus        81 ~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~  160 (359)
                      .+..+|.+|.++..+-++++-++..|++.++++++++|||+|      +.|+++++++.+||.......|+         
T Consensus        84 ~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls------~~Q~iAV~lA~~GV~~~~~~~g~---------  148 (293)
T COG2962          84 LNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLS------RLQWIAVGLAAAGVLIQTWLLGS---------  148 (293)
T ss_pred             HHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhcc------HHHHHHHHHHHHHHHHHHHHcCC---------
Confidence            999999999999999999999999999999999999999999      77999999999999998765421         


Q ss_pred             cchhhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCch
Q 018256          161 KLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDI  240 (359)
Q Consensus       161 ~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (359)
                                  -.+    ..+.=+++|+.|..+.|+.  +.+ +.+-...-.+.-.+......+..+....-....+..
T Consensus       149 ------------lpw----val~la~sf~~Ygl~RK~~--~v~-a~~g~~lE~l~l~p~al~yl~~l~~~~~~~~~~~~~  209 (293)
T COG2962         149 ------------LPW----VALALALSFGLYGLLRKKL--KVD-ALTGLTLETLLLLPVALIYLLFLADSGQFLQQNANS  209 (293)
T ss_pred             ------------CcH----HHHHHHHHHHHHHHHHHhc--CCc-hHHhHHHHHHHHhHHHHHHHHHHhcCchhhhcCCch
Confidence                        222    3445568999999888855  344 444444444444444444444333322111112334


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcCcc
Q 018256          241 ELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQAK  319 (359)
Q Consensus       241 ~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~~~  319 (359)
                      .+..+...|. .|.++..+|..+-++.+-+..+.++|.+|....+++++++||+++..+++..++|-.|..++.++.-+
T Consensus       210 ~~~LLv~aG~-vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l~  287 (293)
T COG2962         210 LWLLLVLAGL-VTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDGLY  287 (293)
T ss_pred             HHHHHHHhhH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5777777787 68899999999999999999999999999999999999999999999999999999999999976544

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.89  E-value=1.1e-24  Score=187.20  Aligned_cols=291  Identities=14%  Similarity=0.145  Sum_probs=219.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 018256            6 TAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMF   85 (359)
Q Consensus         6 ~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   85 (359)
                      ..+.-+. ..+....++.+..++  .+|....-.|.+.-+++..|....++..-.   .+.....+++++|+.|..+..+
T Consensus        40 l~l~~vs-~ff~~~~vv~t~~~e--~~p~e~a~~r~l~~mlit~pcliy~~~~v~---gp~g~R~~LiLRg~mG~tgvml  113 (346)
T KOG4510|consen   40 LLLLTVS-YFFNSCMVVSTKVLE--NDPMELASFRLLVRMLITYPCLIYYMQPVI---GPEGKRKWLILRGFMGFTGVML  113 (346)
T ss_pred             ceehhhH-HHHhhHHHhhhhhhc--cChhHhhhhhhhhehhhhheEEEEEeeeee---cCCCcEEEEEeehhhhhhHHHH
Confidence            3344444 455555555555344  699999999987777766553333332221   1223336788999999999999


Q ss_pred             HHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCCCCCCcccchhh
Q 018256           86 HYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINE  165 (359)
Q Consensus        86 ~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~  165 (359)
                      .|+|++|++.++|+++.+++|.|+.+++|.++|||.+      +.+.+|..+.+.|+++++  + |.+-..++.+    +
T Consensus       114 myya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t------~~eaL~s~itl~GVVLIv--R-PpFlFG~~t~----g  180 (346)
T KOG4510|consen  114 MYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFT------KFEALGSLITLLGVVLIV--R-PPFLFGDTTE----G  180 (346)
T ss_pred             HHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCc------HHHHHHHHHhhheEEEEe--c-CCcccCCCcc----c
Confidence            9999999999999999999999999999999999999      779999999999999984  1 1111110000    0


Q ss_pred             hccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHH
Q 018256          166 LVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAI  245 (359)
Q Consensus       166 ~~~~~~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (359)
                      .+.+.......|.+.++.+.++-|--+++.|+..|+.+ ....+.|..+++.+.+.+.....+..  .++.. ..+|+.+
T Consensus       181 ~~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk~~h-~~msvsyf~~i~lV~s~I~~~~ig~~--~lP~c-gkdr~l~  256 (346)
T KOG4510|consen  181 EDSSQVEYDIPGTVAAISSVLFGASVYIILRYIGKNAH-AIMSVSYFSLITLVVSLIGCASIGAV--QLPHC-GKDRWLF  256 (346)
T ss_pred             cccccccccCCchHHHHHhHhhhhhHHHHHHHhhcccc-EEEEehHHHHHHHHHHHHHHhhccce--ecCcc-ccceEEE
Confidence            00111345567888999999988888899999988887 77778888888888877776544321  22222 1246667


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcCccc
Q 018256          246 GYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQAKE  320 (359)
Q Consensus       246 ~~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~~~~  320 (359)
                      +.+|+ ..++++.+.+.++|+..+..++++.+.+.+++.++..+++++.|+++.|+|+++|+.+.+.....|..+
T Consensus       257 ~~lGv-fgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~kwa~  330 (346)
T KOG4510|consen  257 VNLGV-FGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKKWAG  330 (346)
T ss_pred             EEehh-hhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHHHhc
Confidence            77787 466899999999999999999999999999999999999999999999999999999988888665444

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.89  E-value=2.4e-21  Score=177.93  Aligned_cols=275  Identities=15%  Similarity=0.129  Sum_probs=206.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 018256            5 VTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQM   84 (359)
Q Consensus         5 ~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   84 (359)
                      ++++.++++++||.+.+..|. .. +.++.+..  |..++.+++..+....++++   +..++.+...++.|++...++.
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~-~~-g~~~~~~~--~~~~g~l~~~~~~~~~~~~~---~~~~~~~~~g~l~G~~w~ig~~   74 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVK-IG-GGPYSQTL--GTTFGALILSIAIAIFVLPE---FWALSIFLVGLLSGAFWALGQI   74 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhc-cC-CCHHHHHH--HHHHHHHHHHHHHHHHhCCc---ccccHHHHHHHHHHHHHHhhhh
Confidence            478889999999999999998 44 77887775  77777777665554433211   1224555666777777799999


Q ss_pred             HHHHHhccCCcchhhhhhc-cchHHHHHHHHHHhhccccceecccccc----chhHHHHHhHHHHHHhhcCCCCCCCCCc
Q 018256           85 FHYFGIENGSPALASAMID-LTPGFTFILAIIFRMEKLELRVQSSQAK----SFGTVLLIGGALIVTLYKGLPITSAPSK  159 (359)
Q Consensus        85 ~~~~al~~~~~~~a~~l~~-~~Pi~~~lls~l~~~E~~~~~~~~~~~~----~~g~~l~~~Gv~ll~~~~~~~~~~~~~~  159 (359)
                      +++.++++++.+.+..+.+ +.+++..+.+.+++|||.+.+      +    .+|++++++|++++...++++..     
T Consensus        75 ~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~------~~~~~~~g~~l~l~G~~l~~~~~~~~~~-----  143 (290)
T TIGR00776        75 NQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSI------QTLLGLLALILIIIGVYLTSRSKDKSAG-----  143 (290)
T ss_pred             hHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchH------HHHHHHHHHHHHHHhHheEEeccccccc-----
Confidence            9999999999999999988 888999999999999999954      7    99999999998887432211100     


Q ss_pred             ccchhhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHH---HHHHHHHHHHHHhcCCCCcccc
Q 018256          160 NKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSI---FVTILSSAVSLVAEKNPNAWRL  236 (359)
Q Consensus       160 ~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  236 (359)
                              .++..+...|.+++++++++|+.|.+..|+.  +++ +...++.+..   +++.+.....  . .. .++  
T Consensus       144 --------~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~--~~~-~~~~~~~~~~g~~~~~~~~~~~~--~-~~-~~~--  206 (290)
T TIGR00776       144 --------IKSEFNFKKGILLLLMSTIGYLVYVVVAKAF--GVD-GLSVLLPQAIGMVIGGIIFNLGH--I-LA-KPL--  206 (290)
T ss_pred             --------cccccchhhHHHHHHHHHHHHHHHHHHHHHc--CCC-cceehhHHHHHHHHHHHHHHHHH--h-cc-cch--
Confidence                    0000234679999999999999999999976  355 7777444443   3333222221  1 00 111  


Q ss_pred             cCchhHHHHHHHHHHHHHHHHHHHHHHHh-cCCcceeeeccchhhHHHHHHHHHHhcCccchhhH----HHHHHHHHHHH
Q 018256          237 RPDIELMAIGYSAIFAVSVRSVFHTWALR-KKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSF----VGAATIALGFY  311 (359)
Q Consensus       237 ~~~~~~~~~~~~g~~~~~~~~~~~~~~l~-~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~----iG~~lii~gi~  311 (359)
                      .+...+..+ ..|++ ..+++.+|..+.+ +.++++.+.+...+|+.+.+++++++||..++.++    +|+++|+.|+.
T Consensus       207 ~~~~~~~~~-~~Gi~-~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~  284 (290)
T TIGR00776       207 KKYAILLNI-LPGLM-WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAAN  284 (290)
T ss_pred             HHHHHHHHH-HHHHH-HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHH
Confidence            111223334 47887 7999999999999 99999999999999999999999999999999999    99999999998


Q ss_pred             HHHhc
Q 018256          312 AVIWG  316 (359)
Q Consensus       312 l~~~~  316 (359)
                      +....
T Consensus       285 l~~~~  289 (290)
T TIGR00776       285 ILGIG  289 (290)
T ss_pred             HHhcc
Confidence            87654

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.81  E-value=1.4e-18  Score=156.77  Aligned_cols=233  Identities=17%  Similarity=0.223  Sum_probs=183.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCC
Q 018256           72 IFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGL  151 (359)
Q Consensus        72 ~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~  151 (359)
                      .+..-.+.++.++.++.|+.+++++..+++.+++.+|+..++.++.+||+|      +.|++++.+.+.|++++.+++..
T Consensus       162 sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft------~sKllav~~si~GViiVt~~~s~  235 (416)
T KOG2765|consen  162 SLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFT------LSKLLAVFVSIAGVIIVTMGDSK  235 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhh------HHHHHHHHHhhccEEEEEecccc
Confidence            334444449999999999999999999999999999999999999999999      45999999999999999776533


Q ss_pred             CCCCCCCcccchhhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCC---CchHHHHHHHHHHHHHHHHHHHHhc
Q 018256          152 PITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYP---AELMVTLICSIFVTILSSAVSLVAE  228 (359)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  228 (359)
                      +.+             ........+|+++++++++.||.|.++.||...+.+   |--.+..+.-++..++++|..++..
T Consensus       236 ~~~-------------~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~  302 (416)
T KOG2765|consen  236 QNS-------------DLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILD  302 (416)
T ss_pred             ccc-------------cCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHH
Confidence            311             113456689999999999999999999998765542   1223334444555556655544322


Q ss_pred             C-CCCcccccCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHH
Q 018256          229 K-NPNAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIA  307 (359)
Q Consensus       229 ~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii  307 (359)
                      . ..+.+..+.......++..++++++++-++|.++.-..+|..+++-+.++.+.+++.+.++-|.++++.+++|.+.|+
T Consensus       303 ~~~~e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~If  382 (416)
T KOG2765|consen  303 FFGEERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIF  382 (416)
T ss_pred             HhccCcccCCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHH
Confidence            1 222333333334455667778899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCcccccc
Q 018256          308 LGFYAVIWGQAKEEKM  323 (359)
Q Consensus       308 ~gi~l~~~~~~~~~~~  323 (359)
                      +|.+.++..++...++
T Consensus       383 v~Fv~vn~~~~~~~~~  398 (416)
T KOG2765|consen  383 VGFVIVNISSENSKKD  398 (416)
T ss_pred             HHHhheeccccccccc
Confidence            9999999876544333

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.81  E-value=3.1e-17  Score=151.98  Aligned_cols=267  Identities=13%  Similarity=0.154  Sum_probs=207.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhhhccchHHHHHH
Q 018256           33 HFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFIL  112 (359)
Q Consensus        33 p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~ll  112 (359)
                      |..+++..++...+.-.+.....+ +   ++.++..++.++..+++..++..+.+.|++|++.+.-.++..+.|++++++
T Consensus        32 ~~~lt~~q~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~  107 (303)
T PF08449_consen   32 PLFLTFVQFAFNALFSFILLSLFK-F---PKSRKIPLKKYAILSFLFFLASVLSNAALKYISYPTQIVFKSSKPIPVMIL  107 (303)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhcc-c---cCCCcChHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHH
Confidence            888888888887776655443333 1   223344457778889999999999999999999999999999999999999


Q ss_pred             HHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCCCCCCcccchhhhccCCCCchhHHHHHHHHHHHHHHHHH
Q 018256          113 AIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYY  192 (359)
Q Consensus       113 s~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~  192 (359)
                      +.+++|+|.+++      +++++++..+|+++....+......           ..+....+..|+++++++.++.|...
T Consensus       108 ~~l~~~k~y~~~------~~~~v~li~~Gv~~~~~~~~~~~~~-----------~~~~~~~~~~G~~ll~~sl~~~a~~~  170 (303)
T PF08449_consen  108 GVLILGKRYSRR------QYLSVLLITIGVAIFTLSDSSSSSS-----------SNSSSFSSALGIILLLLSLLLDAFTG  170 (303)
T ss_pred             HHHhcCccccHH------HHHHHHHHHhhHheeeecccccccc-----------cccccccchhHHHHHHHHHHHHHHHH
Confidence            999999999955      9999999999999986554322111           01112233459999999999999999


Q ss_pred             HHHHHHHhhC-CCchHHHHHHHHHHHHHHHHHHHH--hcCCCCccc--ccCchhHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 018256          193 IVQAWIVRDY-PAELMVTLICSIFVTILSSAVSLV--AEKNPNAWR--LRPDIELMAIGYSAIFAVSVRSVFHTWALRKK  267 (359)
Q Consensus       193 vl~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~  267 (359)
                      +.++|..+++ .++.+.+++.+.++.+...+..+.  .++....+.  ...+..+..++...+ +..++..+.++..++.
T Consensus       171 ~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~-~~~~g~~~i~~~~~~~  249 (303)
T PF08449_consen  171 VYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSL-TGALGQFFIFYLIKKF  249 (303)
T ss_pred             HHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHH-HHHHHHHHHHHHHHhc
Confidence            9999988664 346789999999999988888876  333222111  111113444444444 5566777777889999


Q ss_pred             CcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcCcccc
Q 018256          268 GPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQAKEE  321 (359)
Q Consensus       268 ~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~~~~~  321 (359)
                      ++...+++..+.-+++++++++++|+++++.+|+|.++++.|..+..+.++|++
T Consensus       250 ~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~~  303 (303)
T PF08449_consen  250 SALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKKN  303 (303)
T ss_pred             CchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccCC
Confidence            999999999999999999999999999999999999999999999999888764

; GO: 0055085 transmembrane transport

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.73  E-value=3.8e-17  Score=148.81  Aligned_cols=275  Identities=13%  Similarity=0.111  Sum_probs=211.0

Q ss_pred             HHHHHHHHh--CCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCcch
Q 018256           20 NTVTKAAMS--RGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPAL   97 (359)
Q Consensus        20 ~~~~k~~~~--~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~   97 (359)
                      ....|+.++  +.--|..++..+...+.+.+.....+...+.. +..++..++..+..|++.+.+..+-+.++++.+++.
T Consensus        33 ~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~-~~~~~~~~~~llpl~~~~~~~~v~~n~Sl~~v~VsF  111 (316)
T KOG1441|consen   33 IILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPS-KISSKLPLRTLLPLGLVFCISHVLGNVSLSYVPVSF  111 (316)
T ss_pred             EEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCC-ccccccchHHHHHHHHHHHHHHHhcchhhhccchhH
Confidence            356788777  45668888888777777666554444333332 222456678889999999999999999999999999


Q ss_pred             hhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCCCCCCcccchhhhccCCCCchhHH
Q 018256           98 ASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIG  177 (359)
Q Consensus        98 a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G  177 (359)
                      ...+..++|+++.++++++.+|+.+++      ..+.++..+.|+.+.+..+                     ......|
T Consensus       112 ~q~iKa~~P~~tvl~~~~~~~~~~s~~------~~lsL~piv~GV~ias~~e---------------------~~fn~~G  164 (316)
T KOG1441|consen  112 YQTIKALMPPFTVLLSVLLLGKTYSSM------TYLSLLPIVFGVAIASVTE---------------------LSFNLFG  164 (316)
T ss_pred             HHHHHhhcchhHHHHHHHHhCCCCcce------EEEEEEEeeeeEEEeeecc---------------------ccccHHH
Confidence            999999999999999999999999955      7788888888888774322                     3455789


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhh---CCCchHHHHHHHHHHHHHHH-HHHHHhcCCCC-cccc-cCchhHHHHHHHHHH
Q 018256          178 GIFLAAHSVILAIYYIVQAWIVRD---YPAELMVTLICSIFVTILSS-AVSLVAEKNPN-AWRL-RPDIELMAIGYSAIF  251 (359)
Q Consensus       178 ~~~~l~a~~~~a~~~vl~k~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~-~~~~~~~~~~~~g~~  251 (359)
                      .+.++++.+.++..+++.|+..++   .-|++....++.-++.+.++ |+....+++.. .+.. .++......++..+ 
T Consensus       165 ~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~sv-  243 (316)
T KOG1441|consen  165 FISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLILLLNSV-  243 (316)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHHHHHHH-
Confidence            999999999999999999998742   23489999999999999888 77765555433 0000 11111222222222 


Q ss_pred             HHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcCcccccc
Q 018256          252 AVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQAKEEKM  323 (359)
Q Consensus       252 ~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~~~~~~~  323 (359)
                      ....-...-+..+.+++|.+.++.+.+.-++.++.++++++|+.++.+..|+++.++|++++.+.|.+++++
T Consensus       244 ~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~~~  315 (316)
T KOG1441|consen  244 LAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEKKG  315 (316)
T ss_pred             HHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhhcc
Confidence            222223344578999999999999999999999999999999999999999999999999999988776543

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.66  E-value=8.7e-16  Score=118.23  Aligned_cols=135  Identities=14%  Similarity=0.172  Sum_probs=122.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHH
Q 018256            4 SVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQ   83 (359)
Q Consensus         4 ~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   83 (359)
                      ...++.++++++||...++.|..++ ++||...++.|.....+.+..+++..++.+.....+.|.+....+.|+.+.++.
T Consensus         3 ~~~~~ALLsA~fa~L~~iF~KIGl~-~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glsw   81 (140)
T COG2510           3 AAIIYALLSALFAGLTPIFAKIGLE-GVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSW   81 (140)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcc-ccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHH
Confidence            3467889999999999999999888 899999999999999998888877777666533457888888999998889999


Q ss_pred             HHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHH
Q 018256           84 MFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV  145 (359)
Q Consensus        84 ~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll  145 (359)
                      .+||.|++...++....+..+.|+++.+++++++|||+|.+      +++|+.+..+|++++
T Consensus        82 l~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~------~~iG~~LI~~Gailv  137 (140)
T COG2510          82 LLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLP------TWIGIVLIVIGAILV  137 (140)
T ss_pred             HHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHH------HHHHHHHHHhCeeeE
Confidence            99999999999999999999999999999999999999965      999999999999876

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.65  E-value=1.7e-14  Score=122.44  Aligned_cols=262  Identities=13%  Similarity=0.104  Sum_probs=202.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhhhccchHHHHHH
Q 018256           33 HFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFIL  112 (359)
Q Consensus        33 p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~ll  112 (359)
                      ...++++....-.++.-.+..++++ .+   .+....+.+..++.-..+.+...+.|++|.|-....+-.++-|+=++++
T Consensus        53 alaLVf~qC~~N~vfAkvl~~ir~~-~~---~D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMil  128 (337)
T KOG1580|consen   53 ALALVFFQCTANTVFAKVLFLIRKK-TE---IDNTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMIL  128 (337)
T ss_pred             HHHHHHHHHHHHHHHHHhheeeccc-cc---ccCCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeee
Confidence            4455666666655554333333332 22   3333335566666666888899999999999999999999999999999


Q ss_pred             HHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCCCCCCcccchhhhccCCCCchhHHHHHHHHHHHHHHHHH
Q 018256          113 AIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYY  192 (359)
Q Consensus       113 s~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~  192 (359)
                      +.++.+++-+|+      +...+++.++|+.+. +++.....             +..+.....|.++.+++-..-+...
T Consensus       129 GVl~~~KsY~w~------kY~cVL~IV~GValF-mYK~~Kv~-------------g~e~~t~g~GElLL~lSL~mDGlTg  188 (337)
T KOG1580|consen  129 GVLFAHKSYHWR------KYCCVLMIVVGVALF-MYKENKVG-------------GAEDKTFGFGELLLILSLAMDGLTG  188 (337)
T ss_pred             ehhhhcccccHH------HHHHHHHHHHHHHHh-hccccccC-------------CCcccccchHHHHHHHHHHhcccch
Confidence            999999999965      999999999999998 55533222             2235566789999999988888888


Q ss_pred             HHHHHHHhhC-CCchHHHHHHHHHHHHHHHHHHHHhcCCC--CcccccCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 018256          193 IVQAWIVRDY-PAELMVTLICSIFVTILSSAVSLVAEKNP--NAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGP  269 (359)
Q Consensus       193 vl~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~  269 (359)
                      ..+.+..+.+ +....++++.++.+++.+....++.++-+  ..+....+..|+-+..+++ ++++++++.+..+...+|
T Consensus       189 ~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai-~s~LGQ~fIF~tv~~FgP  267 (337)
T KOG1580|consen  189 SIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAI-ASCLGQWFIFKTVEEFGP  267 (337)
T ss_pred             hHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHH-HHHhhhHHHHHHHHHhCC
Confidence            8888776553 33567889999999998887776655532  2333333345777777787 899999999999999999


Q ss_pred             ceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcCcc
Q 018256          270 VYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQAK  319 (359)
Q Consensus       270 ~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~~~  319 (359)
                      .+-|++....-.|+++.++++++.+++..||+|..+++.|...-....+|
T Consensus       268 LtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~GK~  317 (337)
T KOG1580|consen  268 LTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVDGKK  317 (337)
T ss_pred             eeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhcCCc
Confidence            99999999999999999999999999999999999999998887765443

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.62  E-value=1.4e-13  Score=121.43  Aligned_cols=253  Identities=16%  Similarity=0.199  Sum_probs=187.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhccCC--CCCCCHHHH-HHHHHHHHHHHHHHHHHHHHhccCCcchhhhhhccchHHH
Q 018256           33 HFILVVYSNTLAIFLLVPSSFIFYRKRT--PPQLTWSIV-CRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFT  109 (359)
Q Consensus        33 p~~~~~~R~~~a~i~l~~~~~~~~~~~~--~~~~~~~~~-~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~  109 (359)
                      |...+.+.+++-.++-......++++..  +.+++|++. ++....++.++....+.+++++|++.+.-++..+..++|+
T Consensus        45 PLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FI  124 (349)
T KOG1443|consen   45 PLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFI  124 (349)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHH
Confidence            7777777776665555444433333322  136788775 5666788888999999999999999999999999999999


Q ss_pred             HHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCCCCCCcccchhhhccCCCCchhHHHHHHHHHHHHHH
Q 018256          110 FILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILA  189 (359)
Q Consensus       110 ~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a  189 (359)
                      .+++.++.-||++|.      -..-+++..+|+++++ ++                    +.+....|..+.++++++-+
T Consensus       125 llFs~if~lEk~~w~------L~l~v~lI~~Glflft-~K--------------------sTqf~i~Gf~lv~~aS~~sG  177 (349)
T KOG1443|consen  125 LLFSLIFKLEKFRWA------LVLIVLLIAVGLFLFT-YK--------------------STQFNIEGFFLVLAASLLSG  177 (349)
T ss_pred             HHHHHHHHhHHHHHH------HHHHHHHHhhheeEEE-ec--------------------ccceeehhHHHHHHHHHhhh
Confidence            999999999999943      5555555666666653 23                    14455789999999988888


Q ss_pred             HHHHHHHHHHhhC----CCchHHHHHHHHHHHHHHHHHHHHhcCCCC-----cccccCc-hhHHHHHHHHHHHHHHHHH-
Q 018256          190 IYYIVQAWIVRDY----PAELMVTLICSIFVTILSSAVSLVAEKNPN-----AWRLRPD-IELMAIGYSAIFAVSVRSV-  258 (359)
Q Consensus       190 ~~~vl~k~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~-~~~~~~~~~g~~~~~~~~~-  258 (359)
                      +...+.++.+++.    ++|....+.......+.+++..+..|+...     .|..... ..+..+.++++ +..+++. 
T Consensus       178 lRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l-~g~laF~l  256 (349)
T KOG1443|consen  178 LRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISL-GGLLAFLL  256 (349)
T ss_pred             hhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHH-HHHHHHHH
Confidence            8877777766653    368888888888888888888887776421     2222222 12333333333 2333333 


Q ss_pred             --HHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHH
Q 018256          259 --FHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAV  313 (359)
Q Consensus       259 --~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~  313 (359)
                        .-...+.+++..+.++..-..-+-+.+++....+|+++...|+|..+...|+.+.
T Consensus       257 ~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~  313 (349)
T KOG1443|consen  257 EFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH  313 (349)
T ss_pred             HHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence              3345688899999999999999999999999999999999999999999999988

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.61  E-value=5.2e-13  Score=119.43  Aligned_cols=288  Identities=11%  Similarity=0.062  Sum_probs=220.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHH--HHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHH
Q 018256            5 VTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVV--YSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCG   82 (359)
Q Consensus         5 ~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~--~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   82 (359)
                      +....+.=++.--.+.++.|..++.+--|..+..  ++++...+++...-  +.|-.+.++++++..+.++...++....
T Consensus        13 ~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk--~~~lv~~~~l~~~~~kk~~P~~~lf~~~   90 (314)
T KOG1444|consen   13 PLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLK--RLGLVNFRPLDLRTAKKWFPVSLLFVGM   90 (314)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHH--HhceeecCCcChHHHHHHccHHHHHHHH
Confidence            3444444455555667888998875444555555  88877777664322  2333333678999999999999999999


Q ss_pred             HHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCCCCCCcccc
Q 018256           83 QMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKL  162 (359)
Q Consensus        83 ~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~  162 (359)
                      .+.-..+++|.++..-+++.+..|+++++...+++|.|++++      -+.++....+|.......+             
T Consensus        91 i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~------v~~Sv~~m~~~s~~~~~~d-------------  151 (314)
T KOG1444|consen   91 LFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNK------VWASVFAMIIGSVAAAFTD-------------  151 (314)
T ss_pred             HHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhh------HHHHHHHHHHHHHhhcccc-------------
Confidence            999999999999999999999999999999999999888844      7777777777766653211             


Q ss_pred             hhhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhC-CCchHHHHHHHHHHHHHHHHHHHHhcCCC------Cccc
Q 018256          163 INELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDY-PAELMVTLICSIFVTILSSAVSLVAEKNP------NAWR  235 (359)
Q Consensus       163 ~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~  235 (359)
                              ......|..+++.+.++-+.+.+..|+..+.. -+.+..++|-.+.+.+.+.+...+.++..      ..|.
T Consensus       152 --------~sf~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~  223 (314)
T KOG1444|consen  152 --------LSFNLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWS  223 (314)
T ss_pred             --------ceecchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhccccc
Confidence                    23334599999999999999999999876542 23677889999999999988887666522      1121


Q ss_pred             ccCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHh
Q 018256          236 LRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIW  315 (359)
Q Consensus       236 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~  315 (359)
                        ....+..+...++++.++.|.. .+..+..++++.++.+...-..+.+-+.+++|++.++...+|..+-+.|..++++
T Consensus       224 --~~~~~~~~~lScv~gf~isy~s-~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~  300 (314)
T KOG1444|consen  224 --DSSVLVVMLLSCVMGFGISYTS-FLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSY  300 (314)
T ss_pred             --chhHHHHHHHHHHHHHHHHHHH-HHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhh
Confidence              1234677888888888887776 4678888999999999888888888888888899999999999999999999998


Q ss_pred             cCccccccc
Q 018256          316 GQAKEEKMD  324 (359)
Q Consensus       316 ~~~~~~~~~  324 (359)
                      .+.++++.+
T Consensus       301 ~~~~~k~~~  309 (314)
T KOG1444|consen  301 ATFRKKKQP  309 (314)
T ss_pred             hhhhhccCC
Confidence            876654433

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.57  E-value=2.2e-15  Score=129.31  Aligned_cols=250  Identities=14%  Similarity=0.107  Sum_probs=195.3

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhhhccchHHHHH
Q 018256           32 SHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFI  111 (359)
Q Consensus        32 ~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~l  111 (359)
                      .|..-.++-+..-+++-.++..++++.      -+-.|+.+++.+++..-++++...|.||++...+.++.--.-..+.+
T Consensus        47 ~Pt~QtFl~Y~LLalVY~~~~~fR~~~------~~~~~~hYilla~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~  120 (336)
T KOG2766|consen   47 APTSQTFLNYVLLALVYGPIMLFRRKY------IKAKWRHYILLAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLV  120 (336)
T ss_pred             CccHHHHHHHHHHHHHHhhHHHhhhHH------HHHHHHHhhheeEEeecccEEEeeehhhcchHHHHHHHHhhhHHHHH
Confidence            477778888877778888777665522      12344568888888888899999999999999999999877778889


Q ss_pred             HHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCCCCCCcccchhhhccCCCCchhHHHHHHHHHHHHHHHH
Q 018256          112 LAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIY  191 (359)
Q Consensus       112 ls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~  191 (359)
                      ++|+++|.|-+      +.|+.|+.+|++|++++.+.+-.. +            ...++.+...|+.+.++++-+||..
T Consensus       121 lsw~fLktrYr------lmki~gV~iCi~GvvmvV~sDV~a-g------------d~aggsnp~~GD~lvi~GATlYaVS  181 (336)
T KOG2766|consen  121 LSWFFLKTRYR------LMKISGVVICIVGVVMVVFSDVHA-G------------DRAGGSNPVKGDFLVIAGATLYAVS  181 (336)
T ss_pred             HHHHHHHHHHh------hheeeeEEeEecceEEEEEeeecc-c------------cccCCCCCccCcEEEEecceeeeec
Confidence            99999999998      559999999999999985443111 1            1234567789999999999999999


Q ss_pred             HHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHhcCC-CCcccccCchhHHHHHHH-HHHHHHHHHHHHHHHHhcCCc
Q 018256          192 YIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKN-PNAWRLRPDIELMAIGYS-AIFAVSVRSVFHTWALRKKGP  269 (359)
Q Consensus       192 ~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~l~~~~~  269 (359)
                      ++..+...|+.+ ..+++....++|++++.+-.. .+.. ...  ..++  +-...|+ ..++.++-|.+.-..+|..++
T Consensus       182 Nv~EEflvkn~d-~~elm~~lgLfGaIIsaIQ~i-~~~~~~~t--l~w~--~~i~~yl~f~L~MFllYsl~pil~k~~~a  255 (336)
T KOG2766|consen  182 NVSEEFLVKNAD-RVELMGFLGLFGAIISAIQFI-FERHHVST--LHWD--SAIFLYLRFALTMFLLYSLAPILIKTNSA  255 (336)
T ss_pred             cccHHHHHhcCc-HHHHHHHHHHHHHHHHHHHHh-hhccceee--Eeeh--HHHHHHHHHHHHHHHHHHhhHHheecCCc
Confidence            999999999988 899999999999999988844 4332 221  1111  1222222 233556667777788999999


Q ss_pred             ceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHH
Q 018256          270 VYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVI  314 (359)
Q Consensus       270 ~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~  314 (359)
                      +...+-..+.-.++++.  ..+|=+.+|...+..+.++.|.+++.
T Consensus       256 T~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs  298 (336)
T KOG2766|consen  256 TMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYS  298 (336)
T ss_pred             eEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEee
Confidence            99999999999999998  56788899999999999999998884

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.56  E-value=1e-13  Score=106.88  Aligned_cols=136  Identities=20%  Similarity=0.204  Sum_probs=116.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHH
Q 018256          177 GGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSVR  256 (359)
Q Consensus       177 G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  256 (359)
                      ..++++++++++++..+..|--.++.+ |..-++.+.++..+.+..+....++....-.. ....|..+...|+ .++++
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~~vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~-~~k~~lflilSGl-a~gls   80 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLEGVD-PDFATTIRTIVILIFLLIVLLVTGNWQAGGEI-GPKSWLFLILSGL-AGGLS   80 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccccC-ccHHHHHHHHHHHHHHHHHHHhcCceeccccc-CcceehhhhHHHH-HHHHH
Confidence            457899999999999999999888887 88899999999988888887755443222111 2234788888886 89999


Q ss_pred             HHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHh
Q 018256          257 SVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIW  315 (359)
Q Consensus       257 ~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~  315 (359)
                      ..+|+++++..+++.+..+.-++|+++++++++++||++|..+++|+++|.+|.+++.+
T Consensus        81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            99999999999999999999999999999999999999999999999999999887654

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.55  E-value=1.7e-11  Score=111.37  Aligned_cols=298  Identities=13%  Similarity=0.110  Sum_probs=209.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCC---CChHHHHHHHHHHHHHHHHHHHHHhhcc---CCCCCC------CHHHHHHHH
Q 018256            6 TAAMVTLEFLDVGLNTVTKAAMSRG---ASHFILVVYSNTLAIFLLVPSSFIFYRK---RTPPQL------TWSIVCRIF   73 (359)
Q Consensus         6 ~~~~l~~~~~~g~~~~~~k~~~~~~---~~p~~~~~~R~~~a~i~l~~~~~~~~~~---~~~~~~------~~~~~~~~~   73 (359)
                      .+.++...+.++......|++-..+   ..|...++.--.+-.++.....+...|+   +..+.+      .+++..+..
T Consensus        17 ~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~   96 (345)
T KOG2234|consen   17 YLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVS   96 (345)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHH
Confidence            4566777788999999999976545   6688888887777776666555544322   111222      345667777


Q ss_pred             HHHHHHHHHHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCC
Q 018256           74 LLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPI  153 (359)
Q Consensus        74 ~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~  153 (359)
                      +-+++.++.|.+.|.++.+.+++.-++...+.-+-|++++.+++++|+++      .||.+.++.+.|+.++-....+..
T Consensus        97 vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~------~Qw~Al~lL~~Gv~~vQ~~~~~~~  170 (345)
T KOG2234|consen   97 VPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSR------LQWMALVLLFAGVALVQLPSLSPT  170 (345)
T ss_pred             HHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhH------HHHHHHHHHHHHHHHHhccCCCCC
Confidence            88888888888999999999999999999999999999999999999994      499999999999999852221110


Q ss_pred             CCCCCcccchhhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCC-chHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 018256          154 TSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPA-ELMVTLICSIFVTILSSAVSLVAEKNPN  232 (359)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (359)
                      +          +.......+...|....+.+++.-+...++.+|..|+.+. ....+....+++.+..+...+..+....
T Consensus       171 ~----------a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i  240 (345)
T KOG2234|consen  171 G----------AKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAI  240 (345)
T ss_pred             C----------ccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence            0          0002235677899999999999999999999998876442 3444444556666666555554433211


Q ss_pred             cccccCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHH
Q 018256          233 AWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYA  312 (359)
Q Consensus       233 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l  312 (359)
                      .|.- -...|-...+..++....+-.+-...+|+.+-..=.....+..+++.+.++.++|-++|....+|..+|+.++.+
T Consensus       241 ~~~g-ff~G~s~~vw~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~l  319 (345)
T KOG2234|consen  241 NEYG-FFYGYSSIVWLVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFL  319 (345)
T ss_pred             ccCC-ccccccHHHHHHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHH
Confidence            1110 001122222222233344444445556777766666677788999999999999999999999999999999999


Q ss_pred             HHhcCccc
Q 018256          313 VIWGQAKE  320 (359)
Q Consensus       313 ~~~~~~~~  320 (359)
                      +...+++.
T Consensus       320 Y~~~P~~~  327 (345)
T KOG2234|consen  320 YSLYPARD  327 (345)
T ss_pred             hhcCCccc
Confidence            99555543

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.51  E-value=7.6e-14  Score=111.55  Aligned_cols=123  Identities=22%  Similarity=0.305  Sum_probs=108.6

Q ss_pred             HHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHhcc
Q 018256           14 FLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLS-CCGQMFHYFGIEN   92 (359)
Q Consensus        14 ~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~al~~   92 (359)
                      ++||...++.|...+ +.||....++|+..+.+ +++.....+++.. ++.+++++......|++. ..++.+++.|+++
T Consensus         1 ~~~a~~~~~~k~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~   77 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLK-KISPLSITFWRFLIAGI-LLILLLILGRKPF-KNLSPRQWLWLLFLGLLGTALAYLLYFYALKY   77 (126)
T ss_pred             ceeeeHHHHHHHHhc-cCCHHHHHHHHHHHHHH-HHHHHHhhccccc-cCCChhhhhhhhHhhccceehHHHHHHHHHHh
Confidence            479999999999777 69999999999999998 6555555555443 457788888888999886 9999999999999


Q ss_pred             CCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHH
Q 018256           93 GSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV  145 (359)
Q Consensus        93 ~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll  145 (359)
                      ++++.++.+.++.|+++.+++++++|||++++      ++.|+++.+.|++++
T Consensus        78 ~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~------~~~g~~l~~~g~~l~  124 (126)
T PF00892_consen   78 ISASIVSILQYLSPVFAAILGWLFLGERPSWR------QIIGIILIIIGVVLI  124 (126)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999955      999999999999886

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.48  E-value=3.2e-12  Score=114.01  Aligned_cols=230  Identities=11%  Similarity=0.151  Sum_probs=165.0

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHH
Q 018256           65 TWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALI  144 (359)
Q Consensus        65 ~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~l  144 (359)
                      ++++..+..+-+++.++.+.+.+.++++.+++.-.++.++..++|++++++++|+|++      +.||.++.+.+.|+.+
T Consensus        13 ~~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls------~~qW~aL~lL~~Gv~l   86 (244)
T PF04142_consen   13 SPKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLS------RRQWLALFLLVAGVVL   86 (244)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccc------hhhHHHHHHHHHHHhe
Confidence            4677888889999999999999999999999999999999999999999999999999      4599999999999998


Q ss_pred             HHhhcCCCCCCCCCcccchhhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCC-chHHHHHHHHHHHHHHHHH
Q 018256          145 VTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPA-ELMVTLICSIFVTILSSAV  223 (359)
Q Consensus       145 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~  223 (359)
                      +-..+....+..+    ..+............|.++.++++++-+...++.+|..|+.+. ...........+.+...+.
T Consensus        87 v~~~~~~~~~~~~----~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~  162 (244)
T PF04142_consen   87 VQLSSSQSSDNSS----SSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLA  162 (244)
T ss_pred             eecCCcccccccc----ccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHH
Confidence            7433211100000    0000001124556899999999999999999999999888642 3444455556666666555


Q ss_pred             HHHhcCCC-CcccccCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHH
Q 018256          224 SLVAEKNP-NAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVG  302 (359)
Q Consensus       224 ~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG  302 (359)
                      ....+... .+....  ..+-...+..++...++-.+....+|+.+...=........+.+.+.+++++|.+++....+|
T Consensus       163 ~~~~~~~~~~~~g~f--~G~~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg  240 (244)
T PF04142_consen  163 LLLSDGSAISESGFF--HGYSWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLG  240 (244)
T ss_pred             HhcccccccccCCch--hhcchHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhh
Confidence            43322211 110000  011111222333444555566677899998888889999999999999999999999999999


Q ss_pred             HHHH
Q 018256          303 AATI  306 (359)
Q Consensus       303 ~~li  306 (359)
                      +.+|
T Consensus       241 ~~~V  244 (244)
T PF04142_consen  241 AALV  244 (244)
T ss_pred             eecC
Confidence            8753

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.43  E-value=4.9e-13  Score=106.85  Aligned_cols=125  Identities=18%  Similarity=0.292  Sum_probs=106.0

Q ss_pred             HHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHHHHHHHHHHh
Q 018256          186 VILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALR  265 (359)
Q Consensus       186 ~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~  265 (359)
                      ++||.+.+..|+..++.+ +....++++..+.+ ..+.....+...  ....+...+...++.+++++.+++.+++++++
T Consensus         1 ~~~a~~~~~~k~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~   76 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKKIS-PLSITFWRFLIAGI-LLILLLILGRKP--FKNLSPRQWLWLLFLGLLGTALAYLLYFYALK   76 (126)
T ss_pred             ceeeeHHHHHHHHhccCC-HHHHHHHHHHHHHH-HHHHHHhhcccc--ccCCChhhhhhhhHhhccceehHHHHHHHHHH
Confidence            468899999999999877 99999999999998 666665444332  11122234677778888788999999999999


Q ss_pred             cCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHH
Q 018256          266 KKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVI  314 (359)
Q Consensus       266 ~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~  314 (359)
                      +.+++.++.+.+++|+++.++++++++|+++..+++|+++++.|+++..
T Consensus        77 ~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   77 YISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999998875

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.27  E-value=5e-10  Score=97.94  Aligned_cols=277  Identities=15%  Similarity=0.135  Sum_probs=194.1

Q ss_pred             HHHHHHHHHHHHHh---CCC----ChHHHHHHHHHHHHHHHHHHHHHhhccCCC--------------CCCCHHHHHHHH
Q 018256           15 LDVGLNTVTKAAMS---RGA----SHFILVVYSNTLAIFLLVPSSFIFYRKRTP--------------PQLTWSIVCRIF   73 (359)
Q Consensus        15 ~~g~~~~~~k~~~~---~~~----~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~--------------~~~~~~~~~~~~   73 (359)
                      .=+++.+++|++=+   ++-    +|+......++.-+..++.+.+++.|....              +++++   ...+
T Consensus        14 sGs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p---~lfl   90 (372)
T KOG3912|consen   14 SGSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNP---VLFL   90 (372)
T ss_pred             hccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCc---ceec
Confidence            34566788888622   233    377777777777777777777666654331              12333   2334


Q ss_pred             HHHHHHHHHHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCC
Q 018256           74 LLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPI  153 (359)
Q Consensus        74 ~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~  153 (359)
                      .-.++-.++..+.|.|+.+++++.-+++-...-+|+.+++.-++|.+++      ..+|+|+.....|++.+...+-...
T Consensus        91 ~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~------~~qWl~i~fv~lGlviVg~~d~~~~  164 (372)
T KOG3912|consen   91 PPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTIT------GRQWLGILFVSLGLVIVGSLDVHLV  164 (372)
T ss_pred             ChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccc------hhhHHHHHHHHhhhheeeeeecccc
Confidence            4666778899999999999999999999999999999999999999999      5599999999999988743321111


Q ss_pred             CCCCCcccchhhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhC-CCchHHHHHHHHHHHHHHHHHHHHhcC---
Q 018256          154 TSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDY-PAELMVTLICSIFVTILSSAVSLVAEK---  229 (359)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---  229 (359)
                      +.           ...+.+....|+++.+++-+..|+-.++-+|..+++ -+|.....|.-+++.+++..++.....   
T Consensus       165 ~~-----------p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~  233 (372)
T KOG3912|consen  165 TD-----------PYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPS  233 (372)
T ss_pred             cC-----------CccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheec
Confidence            11           011245678999999999999999999987766553 348999999999997766666543211   


Q ss_pred             --C--------CCcccc----cCchhHHHHHHHHHHHHHHHHHHHH----HHHhcCCcceeeeccchhhHHHHHHHHHHh
Q 018256          230 --N--------PNAWRL----RPDIELMAIGYSAIFAVSVRSVFHT----WALRKKGPVYVSMFKPLGMVVALVFGIAFL  291 (359)
Q Consensus       230 --~--------~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~----~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~  291 (359)
                        .        .++|..    .......++...|.   .++..+++    ...+..++++=.++..+...+-=+++..+.
T Consensus       234 ~~sfS~~~~g~~eD~~~~~~~~~e~p~l~val~~~---~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~  310 (372)
T KOG3912|consen  234 GDSFSCNPRGVLEDWGDAFAALQESPSLAVALIGF---TVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMG  310 (372)
T ss_pred             CCcCcCCCCcchhhHHHHHHHhcCCchhHHHHhhh---hhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHH
Confidence              1        111100    00001223333333   33333333    235567777778888888888888889999


Q ss_pred             cCccchhhHHHHHHHHHHHHHHH
Q 018256          292 GDTLYLGSFVGAATIALGFYAVI  314 (359)
Q Consensus       292 ge~~~~~~~iG~~lii~gi~l~~  314 (359)
                      .|.+...|+.|.++.+.|+.++.
T Consensus       311 ~E~f~llqilGFliLi~Gi~lY~  333 (372)
T KOG3912|consen  311 WEYFHLLQILGFLILIMGIILYN  333 (372)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999988

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.26  E-value=3.3e-10  Score=100.39  Aligned_cols=269  Identities=13%  Similarity=0.137  Sum_probs=201.8

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhhhccchHHHHH
Q 018256           32 SHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFI  111 (359)
Q Consensus        32 ~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~l  111 (359)
                      ++..+++...+.+.++-.  .++..++..++  .++.++.+...++....+..+-+.|++|.+=-...+-..+--+-+++
T Consensus        50 ~~~fL~~~q~l~~~~~s~--~~l~~~k~~~~--~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVml  125 (327)
T KOG1581|consen   50 HSLFLVFCQRLVALLVSY--AMLKWWKKELS--GVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVML  125 (327)
T ss_pred             ccHHHHHHHHHHHHHHHH--HHHhcccccCC--CCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHH
Confidence            467777777777776653  33344333312  23445777788888899999999999999999888888888888999


Q ss_pred             HHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCCCCCCcccchhhhccCCCCchhHHHHHHHHHHHHHHHH
Q 018256          112 LAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIY  191 (359)
Q Consensus       112 ls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~  191 (359)
                      +..++.+.|.+.+      +-+...+.-.|+.+..+.+.+...            ...+..+...|..++...-+.-+..
T Consensus       126 mg~Lvy~~ky~~~------eYl~~~LIs~GvsiF~l~~~s~s~------------~~~g~~ns~~G~~Ll~~~L~fDgfT  187 (327)
T KOG1581|consen  126 MGTLVYGRKYSSF------EYLVAFLISLGVSIFSLFPNSDSS------------SKSGRENSPIGILLLFGYLLFDGFT  187 (327)
T ss_pred             HHHHHhcCccCcH------HHHHHHHHHhheeeEEEecCCCCc------------cccCCCCchHhHHHHHHHHHHHhhH
Confidence            9999999999954      888888888888777655322210            1113456788999999999999999


Q ss_pred             HHHHHHHHhhC-CCchHHHHHHHHHHHHHHHHHHHHhcCCCCc--ccccCchhHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 018256          192 YIVQAWIVRDY-PAELMVTLICSIFVTILSSAVSLVAEKNPNA--WRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKG  268 (359)
Q Consensus       192 ~vl~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~  268 (359)
                      +..++++.+++ -++..++++.++++.+....-.+..+.....  +....+..++-++.... +..+++.+.++.+++.|
T Consensus       188 n~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~-~gavGQ~FI~~TI~~FG  266 (327)
T KOG1581|consen  188 NATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYST-CGAVGQLFIFYTIERFG  266 (327)
T ss_pred             HhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHH-hhhhhhheehhhHhhcc
Confidence            99999887763 2478889999999988887764322222221  11111123555555555 56688898899999999


Q ss_pred             cceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcCcccccc
Q 018256          269 PVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQAKEEKM  323 (359)
Q Consensus       269 ~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~~~~~~~  323 (359)
                      +.+.+.++.+.-++++.++.+.+|.+++..||+|..+++.|+.+-...++|++.+
T Consensus       267 slt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~~~~~  321 (327)
T KOG1581|consen  267 SLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKKKNQP  321 (327)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHhccCc
Confidence            9999999999999999999999999999999999999999999988877764433

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.23  E-value=2.6e-10  Score=103.23  Aligned_cols=130  Identities=16%  Similarity=0.152  Sum_probs=109.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhCCCCh--HHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH-
Q 018256            3 ASVTAAMVTLEFLDVGLNTVTKAAMSRGASH--FILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLS-   79 (359)
Q Consensus         3 ~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p--~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-   79 (359)
                      .++..+.++++++|+......|...+ +.++  .....+|+..+.+++.+..+..++..   ..+++++...+..|+++ 
T Consensus       127 ~~G~~~~l~a~~~~a~~~~~~k~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~  202 (260)
T TIGR00950       127 PAGLLLGLGSGISFALGTVLYKRLVK-KEGPELLQFTGWVLLLGALLLLPFAWFLGPNP---QALSLQWGALLYLGLIGT  202 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhHHhh-cCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC---CcchHHHHHHHHHHHHHH
Confidence            56888999999999999999999665 5564  45555789999888887765544332   24667777778888887 


Q ss_pred             HHHHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHH
Q 018256           80 CCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGA  142 (359)
Q Consensus        80 ~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv  142 (359)
                      ..++.++++++++.+++.++.+.++.|+++.+++++++||+++.      .++.|..+.+.|+
T Consensus       203 ~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~------~~~~G~~li~~g~  259 (260)
T TIGR00950       203 ALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSL------PQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCH------HHHHHHHHHHHhc
Confidence            89999999999999999999999999999999999999999994      4999999998886

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=99.19  E-value=5e-09  Score=93.41  Aligned_cols=251  Identities=16%  Similarity=0.144  Sum_probs=170.5

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCH--HHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhhhc-cchHH
Q 018256           32 SHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTW--SIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMID-LTPGF  108 (359)
Q Consensus        32 ~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~-~~Pi~  108 (359)
                      +|.+-..--.+.+ +++....++..+    |.++.  +.+...++.|++..+++...+.+.++.+++.+-.+.. .+-+.
T Consensus        11 ~~~~Q~lG~t~Ga-li~alv~~~~~~----p~~~~~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg   85 (269)
T PF06800_consen   11 KPANQILGTTIGA-LIFALVVFLFRQ----PAFSMSGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVG   85 (269)
T ss_pred             cHHHHHHHHHHHH-HHHHHHHHHHhC----CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHH
Confidence            4444444433333 333334444444    44554  7788888999999999999999999999999999985 66677


Q ss_pred             HHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCCCCCCcccchhhhccCCCCchhHHHHHHHHHHHHH
Q 018256          109 TFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVIL  188 (359)
Q Consensus       109 ~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~  188 (359)
                      +.+.+.++++|.-+.+.+  .....++++.++|+.+....++++..             .+++.+...|....+++.+.|
T Consensus        86 ~sl~gv~~fgEW~~~~~~--~~G~~Al~liiiGv~lts~~~~~~~~-------------~~~~~~~~kgi~~Ll~stigy  150 (269)
T PF06800_consen   86 TSLIGVLFFGEWTTTTQK--IIGFLALVLIIIGVILTSYQDKKSDK-------------SSSKSNMKKGILALLISTIGY  150 (269)
T ss_pred             HHHHHHhhcCCCCCcchH--HHHHHHHHHHHHHHHHhccccccccc-------------cccccchhhHHHHHHHHHHHH
Confidence            889999999998874411  22455677778888776443322110             112456678999999999999


Q ss_pred             HHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 018256          189 AIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKG  268 (359)
Q Consensus       189 a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~  268 (359)
                      -.|.+..|.  .+.+ +....+=+.+-..+...++....+....+  .   ..|..+ ..|+ .-.++-.+|..+.++.+
T Consensus       151 ~~Y~~~~~~--~~~~-~~~~~lPqaiGm~i~a~i~~~~~~~~~~~--k---~~~~ni-l~G~-~w~ignl~~~is~~~~G  220 (269)
T PF06800_consen  151 WIYSVIPKA--FHVS-GWSAFLPQAIGMLIGAFIFNLFSKKPFFE--K---KSWKNI-LTGL-IWGIGNLFYLISAQKNG  220 (269)
T ss_pred             HHHHHHHHh--cCCC-hhHhHHHHHHHHHHHHHHHhhcccccccc--c---chHHhh-HHHH-HHHHHHHHHHHhHHhcc
Confidence            999999774  3444 66665555444444444444322111111  1   113322 2333 34566777888999999


Q ss_pred             cceeeeccchhhHHHHHHHHHHhcCccchh----hHHHHHHHHHHHHH
Q 018256          269 PVYVSMFKPLGMVVALVFGIAFLGDTLYLG----SFVGAATIALGFYA  312 (359)
Q Consensus       269 ~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~----~~iG~~lii~gi~l  312 (359)
                      ....-.+.-+.++++.+.|.++++|+-+..    .++|.+++++|.++
T Consensus       221 ~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  221 VATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL  268 (269)
T ss_pred             chhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence            999999999999999999999999987755    45788888888764

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.17  E-value=3.4e-10  Score=95.83  Aligned_cols=279  Identities=13%  Similarity=0.149  Sum_probs=198.1

Q ss_pred             HHHHHHHHHh-CCCC-hHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCcc
Q 018256           19 LNTVTKAAMS-RGAS-HFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPA   96 (359)
Q Consensus        19 ~~~~~k~~~~-~~~~-p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~   96 (359)
                      +..-.|+.++ .+.+ -+.+++.+.+...+.+..+-.  .|-   -.++.++.+.++..+++-....+.-..+++|.++.
T Consensus        21 mTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~--l~~---~~fR~t~aK~WfpiSfLLv~MIyt~SKsLqyL~vp   95 (309)
T COG5070          21 MTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKF--LRL---VEFRLTKAKKWFPISFLLVVMIYTSSKSLQYLAVP   95 (309)
T ss_pred             HHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHH--HhH---hheehhhhhhhcCHHHHHHHHHHhcccceeeeeee
Confidence            3444565443 2333 344455666655554433221  121   22334555677778887788888889999999999


Q ss_pred             hhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCCCCCCcccchhhhccCCCCchhH
Q 018256           97 LASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTI  176 (359)
Q Consensus        97 ~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (359)
                      .-+++.++.-+..+..-.+++|.|++      -......++.+..-+.-...+-...              .-.....+.
T Consensus        96 iYTiFKNltII~iAygEvl~Fgg~vt------sl~l~SFilMvlSS~va~w~D~q~~--------------~~~~~~lN~  155 (309)
T COG5070          96 IYTIFKNLTIILIAYGEVLFFGGRVT------SLELLSFILMVLSSVVATWGDQQAS--------------AFKAQILNP  155 (309)
T ss_pred             HHHHhccceeehhHhhHHHHhcCccc------hhhHHHHHHHHHHHHHhccchhhHH--------------HHHhcccCC
Confidence            99999999999999999999999999      6688877777766655432221000              001235567


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHh--hCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCc---ccccCchhHHHHHHHHHH
Q 018256          177 GGIFLAAHSVILAIYYIVQAWIVR--DYPAELMVTLICSIFVTILSSAVSLVAEKNPNA---WRLRPDIELMAIGYSAIF  251 (359)
Q Consensus       177 G~~~~l~a~~~~a~~~vl~k~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~  251 (359)
                      |.+++...++.-+.|....|+..+  +.. -...++|..+.+.++++.+..+.|+....   -... .....++...|+.
T Consensus       156 GY~Wm~~NclssaafVL~mrkri~ltNf~-d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~-~d~l~am~ISgl~  233 (309)
T COG5070         156 GYLWMFTNCLSSAAFVLIMRKRIKLTNFK-DFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLS-VDSLMAMFISGLC  233 (309)
T ss_pred             ceEEEehhhHhHHHHHHHHHHhhcccccc-hhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCC-hHHHHHHHHHHHH
Confidence            999999999999999887776543  233 46679999999999999999877664222   1111 1235566777775


Q ss_pred             HHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcCcccccccc
Q 018256          252 AVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQAKEEKMDE  325 (359)
Q Consensus       252 ~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~~~~~~~~~  325 (359)
                      +.++.|. -.|.++..+.++.+++..+.-.-..+-|.+++||+.+...+....+-..+..++...+.+|++.++
T Consensus       234 svgiSy~-saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~q~q~  306 (309)
T COG5070         234 SVGISYC-SAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQQNQK  306 (309)
T ss_pred             Hhhhhhc-cceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            5555554 478899999999999999999999999999999999999999988888888888877766554443

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=99.14  E-value=1.4e-10  Score=91.28  Aligned_cols=104  Identities=22%  Similarity=0.382  Sum_probs=83.8

Q ss_pred             HHHHHHHHHHHHHHHHHhhccCC-CCCCCHHHHHHHHHHHHHH-HHHHHHHHHHhccCCcchhhhhhccchHHHHHHHHH
Q 018256           38 VYSNTLAIFLLVPSSFIFYRKRT-PPQLTWSIVCRIFLLGLLS-CCGQMFHYFGIENGSPALASAMIDLTPGFTFILAII  115 (359)
Q Consensus        38 ~~R~~~a~i~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~-~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l  115 (359)
                      .+|...+.+++..+...++|... .+..+++.+.+.+..|+++ ..++.++++|+++.+ +.++++.++.|+++.+++++
T Consensus         2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~   80 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL   80 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence            57888988888877766443211 0223334456667778888 699999999999999 58889999999999999999


Q ss_pred             HhhccccceeccccccchhHHHHHhHHHHHHhh
Q 018256          116 FRMEKLELRVQSSQAKSFGTVLLIGGALIVTLY  148 (359)
Q Consensus       116 ~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~  148 (359)
                      ++|||++++      ++.+++++++|++++...
T Consensus        81 ~~~er~~~~------~~~a~~l~~~Gv~li~~~  107 (113)
T PF13536_consen   81 FFKERLSPR------RWLAILLILIGVILIAWS  107 (113)
T ss_pred             HhcCCCCHH------HHHHHHHHHHHHHHHhhh
Confidence            999999955      999999999999999543

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.10  E-value=2.4e-10  Score=99.68  Aligned_cols=279  Identities=14%  Similarity=0.084  Sum_probs=198.7

Q ss_pred             HHHHHHHhC---CC-ChHHHHHHHHHHHHHHHHHHHHHhhcc----CC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 018256           21 TVTKAAMSR---GA-SHFILVVYSNTLAIFLLVPSSFIFYRK----RT-PPQLTWSIVCRIFLLGLLSCCGQMFHYFGIE   91 (359)
Q Consensus        21 ~~~k~~~~~---~~-~p~~~~~~R~~~a~i~l~~~~~~~~~~----~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~   91 (359)
                      ...|+.++.   .. .|....++..+....+-..+-....+-    .. ..+++.+..+.+...++...++....+++++
T Consensus        45 f~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVfi~mI~fnnlcL~  124 (347)
T KOG1442|consen   45 FLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVFILMISFNNLCLK  124 (347)
T ss_pred             hhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhheeeeehhccceehh
Confidence            456665541   12 377777777776655544332221111    11 0235667777888888888888888999999


Q ss_pred             cCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCCCCCCcccchhhhccCCC
Q 018256           92 NGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPL  171 (359)
Q Consensus        92 ~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (359)
                      |.+++.--+--.+..+|+.+++++++|+|-+..      ...+..+.+.|-.+= .   ++.              +..+
T Consensus       125 yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~------~~~~C~lIi~GF~lG-v---dqE--------------~~~~  180 (347)
T KOG1442|consen  125 YVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFF------ALGCCLLIILGFGLG-V---DQE--------------GSTG  180 (347)
T ss_pred             hcceEEEEeccchhhhHHHHhHHhhcccccccc------cceeehhheehheec-c---ccc--------------cccC
Confidence            999999888889999999999999999999843      444444444442221 1   111              1124


Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHHHhhCC-CchHHHHHHHHHHHHHHHHHHHHhcCCCCccc--ccCc-hhHHHHHH
Q 018256          172 SNWTIGGIFLAAHSVILAIYYIVQAWIVRDYP-AELMVTLICSIFVTILSSAVSLVAEKNPNAWR--LRPD-IELMAIGY  247 (359)
Q Consensus       172 ~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~  247 (359)
                      .-...|.+++..+.++-|+..+..||.....+ .-...+.|.++.+.+++.|...+.++-...+.  ..+. ..|..+..
T Consensus       181 ~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtL  260 (347)
T KOG1442|consen  181 TLSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTL  260 (347)
T ss_pred             ccchhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHH
Confidence            45578999999999999999999997654433 34678889999999999999876655332222  2222 23556667


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcCccccccc
Q 018256          248 SAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQAKEEKMD  324 (359)
Q Consensus       248 ~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~~~~~~~~  324 (359)
                      .|+++..++|.. .+=+|..+|.+..+-..-.-..-.+++..+++|..+..-|-|-++|+.|-.++.+.|.++.++.
T Consensus       261 sglfgF~mgyvT-g~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~~  336 (347)
T KOG1442|consen  261 SGLFGFAMGYVT-GWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRKA  336 (347)
T ss_pred             HHHHHHHhhhee-eEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHhh
Confidence            777666666653 2447888999999998888888899999999999999999999999999999999877765544

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.08  E-value=1.9e-09  Score=99.66  Aligned_cols=140  Identities=13%  Similarity=0.156  Sum_probs=110.8

Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCccc--ccCchhHHHHHHHH
Q 018256          172 SNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWR--LRPDIELMAIGYSA  249 (359)
Q Consensus       172 ~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g  249 (359)
                      .+...|.+++++++++|+...+..|.. .+.+ |....++++.++.+.+.+......+ .....  ......+ .....+
T Consensus         4 ~~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~-~~~~~~~R~~~a~~~l~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~   79 (296)
T PRK15430          4 KQTRQGVLLALAAYFIWGIAPAYFKLI-YYVP-ADEILTHRVIWSFFFMVVLMSICRQ-WSYLKTLIQTPQKI-FMLAVS   79 (296)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHh-cCCC-HHHHHHHHHHHHHHHHHHHHHHHcc-HHHHHHHHcCHHHH-HHHHHH
Confidence            355689999999999999999999865 5666 9999999999998877666543321 11100  0011122 223355


Q ss_pred             HHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHh
Q 018256          250 IFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIW  315 (359)
Q Consensus       250 ~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~  315 (359)
                      .+..+..+.++++++++.++..++++.++.|+++.++++++++|+++..+++|.++.++|+.+...
T Consensus        80 ~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~  145 (296)
T PRK15430         80 AVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLW  145 (296)
T ss_pred             HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHH
Confidence            556778899999999999999999999999999999999999999999999999999999988764

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.07  E-value=1.9e-09  Score=89.52  Aligned_cols=138  Identities=12%  Similarity=0.158  Sum_probs=110.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhh------CCCchHHHHHHHHHHHHHHHHHHHHhcCCCC-c--cccc------Cchh
Q 018256          177 GGIFLAAHSVILAIYYIVQAWIVRD------YPAELMVTLICSIFVTILSSAVSLVAEKNPN-A--WRLR------PDIE  241 (359)
Q Consensus       177 G~~~~l~a~~~~a~~~vl~k~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~------~~~~  241 (359)
                      |.++++.+.++.|++.++.|+..++      ..++..+..+....+.+.+.+.....|+... .  ....      ....
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            6789999999999999999987666      4468999999999999999999887766431 1  1110      1123


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHh
Q 018256          242 LMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIW  315 (359)
Q Consensus       242 ~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~  315 (359)
                      +..++..|+. ........+..+++.+|.+.++...+..+..++.+++++||+++..+++|.++.++|.++++|
T Consensus        81 ~~~~~~~~~~-~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   81 IFLLILSGLL-AFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHH-HHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            4445555553 445555667889999999999999999999999999999999999999999999999988764

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.05  E-value=7.8e-09  Score=97.54  Aligned_cols=138  Identities=12%  Similarity=0.125  Sum_probs=100.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCC---CCCCCHHHHHHHHHHHHHHHH
Q 018256            5 VTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRT---PPQLTWSIVCRIFLLGLLSCC   81 (359)
Q Consensus         5 ~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~   81 (359)
                      +.+++++++++|+...++.|....+.-++....++....+.+.+.+......+...   ....+... ...+..++...+
T Consensus       190 G~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~i~y~~i~t~l  268 (358)
T PLN00411        190 GGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDITL-ITIVTMAIITSV  268 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchHH-HHHHHHHHHHHH
Confidence            66788899999999999999866633344455666666666555444444332111   01122222 223334544467


Q ss_pred             HHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhc
Q 018256           82 GQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYK  149 (359)
Q Consensus        82 ~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~  149 (359)
                      .+.++++++++.+++.++.+.++.|++++++++++++|++++.      +++|.++.+.|++++...+
T Consensus       269 ay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~------~~iG~~LIl~Gv~l~~~~~  330 (358)
T PLN00411        269 YYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLG------CLIGGILITLGFYAVMWGK  330 (358)
T ss_pred             HHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHHhhh
Confidence            8889999999999999999999999999999999999999954      9999999999999985443

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.04  E-value=5.3e-09  Score=95.91  Aligned_cols=134  Identities=13%  Similarity=0.099  Sum_probs=101.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHHH
Q 018256          178 GIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSVRS  257 (359)
Q Consensus       178 ~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  257 (359)
                      .++.++++++||..+++.|+..++.+ +  ...+.....++...++..... ....|...+. .++.....+.......+
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~~-~--~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~   77 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKEP-D--FLWWALLAHSVLLTPYGLWYL-AQVGWSRLPA-TFWLLLAISAVANMVYF   77 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCchh-H--HHHHHHHHHHHHHHHHHHHhc-ccCCCCCcch-hhHHHHHHHHHHHHHHH
Confidence            46788999999999999998776644 3  345556666666666554321 1122332222 23334444444677888


Q ss_pred             HHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhc
Q 018256          258 VFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWG  316 (359)
Q Consensus       258 ~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~  316 (359)
                      .++++++++.+++.++++.++.|+++.+++++++||+++..+++|.++++.|+.+....
T Consensus        78 ~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~  136 (281)
T TIGR03340        78 LGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLS  136 (281)
T ss_pred             HHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcc
Confidence            89999999999999999999999999999999999999999999999999999988753

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.02  E-value=1.1e-08  Score=94.39  Aligned_cols=134  Identities=13%  Similarity=0.110  Sum_probs=107.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH-HHH
Q 018256            4 SVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLS-CCG   82 (359)
Q Consensus         4 ~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~   82 (359)
                      .+.++.++++++|+...+..|+..+ +.++...... .+.+.+++.++......  . ...++..+...+..|++. .+.
T Consensus       148 ~G~ll~l~aa~~~a~~~v~~r~~~~-~~~~~~~~~~-~~~~~~~l~~~~~~~~~--~-~~~~~~~~~~~l~lgv~~t~~~  222 (293)
T PRK10532        148 TGAALALGAGACWAIYILSGQRAGA-EHGPATVAIG-SLIAALIFVPIGALQAG--E-ALWHWSILPLGLAVAILSTALP  222 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc-cCCchHHHHH-HHHHHHHHHHHHHHccC--c-ccCCHHHHHHHHHHHHHHHHHH
Confidence            4778999999999999999999544 6777776544 45566666665544322  1 234555555566788888 899


Q ss_pred             HHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhh
Q 018256           83 QMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLY  148 (359)
Q Consensus        83 ~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~  148 (359)
                      +.++++++++.+++.++.+.+++|+++.++++++++|+++      ..+++|..+.+.|++.....
T Consensus       223 ~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~------~~~~iG~~lIl~~~~~~~~~  282 (293)
T PRK10532        223 YSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLT------LIQWLALGAIIAASMGSTLT  282 (293)
T ss_pred             HHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCc------HHHHHHHHHHHHHHHHHHhc
Confidence            9999999999999999999999999999999999999999      55999999999999888554

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.00  E-value=9.8e-09  Score=94.68  Aligned_cols=136  Identities=14%  Similarity=0.027  Sum_probs=110.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH-HH
Q 018256            3 ASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLS-CC   81 (359)
Q Consensus         3 ~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~   81 (359)
                      ..+.+..++++++|+......|. ... -++.....++...+.+++.+.......... ...+.+.+...+..|+++ ..
T Consensus       149 ~~G~l~~l~a~~~~a~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~l~i~~s~~  225 (292)
T PRK11272        149 PWGAILILIASASWAFGSVWSSR-LPL-PVGMMAGAAEMLAAGVVLLIASLLSGERLT-ALPTLSGFLALGYLAVFGSII  225 (292)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHh-cCC-CcchHHHHHHHHHHHHHHHHHHHHcCCccc-ccCCHHHHHHHHHHHHHHHHH
Confidence            35788999999999999999998 342 245566778888888877766544322211 113556777888888887 89


Q ss_pred             HHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHh
Q 018256           82 GQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTL  147 (359)
Q Consensus        82 ~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~  147 (359)
                      ++.++++++++.+++.++.+.++.|+++++++++++||++++      .+++|..+.+.|++++..
T Consensus       226 ~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~------~~iiG~~lIi~gv~~~~~  285 (292)
T PRK11272        226 AISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSP------IEWLALGVIVFAVVLVTL  285 (292)
T ss_pred             HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcH------HHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999994      499999999999988743

>PRK13499 rhamnose-proton symporter; Provisional

Probab=98.99  E-value=3.1e-07  Score=85.22  Aligned_cols=299  Identities=12%  Similarity=0.036  Sum_probs=178.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhCCCC--hHHHHHHHHHHHHHHHHHH--HHHhhcc--CCCCCCCHHHHHHHHHHH
Q 018256            3 ASVTAAMVTLEFLDVGLNTVTKAAMSRGAS--HFILVVYSNTLAIFLLVPS--SFIFYRK--RTPPQLTWSIVCRIFLLG   76 (359)
Q Consensus         3 ~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~--p~~~~~~R~~~a~i~l~~~--~~~~~~~--~~~~~~~~~~~~~~~~~g   76 (359)
                      ..+++..++++++||..++-.|. .. ..+  .++.+.  ..++.+ +.|+  ..+..+.  ....+.+.+.+...++.|
T Consensus         6 ~~G~~~~~i~~~~~GS~~~p~K~-~k-~w~wE~~W~v~--gi~~wl-~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~G   80 (345)
T PRK13499          6 ILGIIWHLIGGASSGSFYAPFKK-VK-KWSWETMWSVG--GIFSWL-ILPWLIAALLLPDFWAYYSSFSGSTLLPVFLFG   80 (345)
T ss_pred             HHHHHHHHHHHHHhhcccccccc-cC-CCchhHHHHHH--HHHHHH-HHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHHH
Confidence            45788999999999999999998 33 233  222211  111111 1111  1111110  000235677788888999


Q ss_pred             HHHHHHHHHHHHHhccCCcchhhhhh-ccchHHHHHHHHHHhhccc---cceeccccccchhHHHHHhHHHHHHhhcCCC
Q 018256           77 LLSCCGQMFHYFGIENGSPALASAMI-DLTPGFTFILAIIFRMEKL---ELRVQSSQAKSFGTVLLIGGALIVTLYKGLP  152 (359)
Q Consensus        77 ~~~~~~~~~~~~al~~~~~~~a~~l~-~~~Pi~~~lls~l~~~E~~---~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~  152 (359)
                      ++...++..++.++++.+.+.+..+. .++-++..++..++++|-.   +  +.......+|+++.++|+++........
T Consensus        81 ~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~--t~~g~~~~~gv~liliGi~l~s~Ag~~k  158 (345)
T PRK13499         81 ALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLA--TNGGRMTLLGVLVALIGVAIVGRAGQLK  158 (345)
T ss_pred             HHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccc--cchHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence            99999999999999999999998887 5888999999999998754   2  1112347788889999998885421111


Q ss_pred             CCCCCCcccchhhhccCCCCchhHHHHHHHHHHHHHHHHH-------HHHHHHHhhCCCchHHHHHHHH---HHHHHHHH
Q 018256          153 ITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYY-------IVQAWIVRDYPAELMVTLICSI---FVTILSSA  222 (359)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~-------vl~k~~~~~~~~~~~~~~~~~~---~~~~~~~~  222 (359)
                      ...        ...+.+.+.+...|.++++++++.++.|+       ...+...+...++.....-+..   .+..+.-.
T Consensus       159 ~~~--------~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~  230 (345)
T PRK13499        159 ERK--------MGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNL  230 (345)
T ss_pred             ccc--------cccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHH
Confidence            000        00000135677899999999999999999       4444322221123322222222   33332221


Q ss_pred             -HHHH---hcCCCC-ccccc-Cchh---HHHHHHHHHHHHHHHHHHHHHHHhcCCcceeee---c-cchhhHHHHHHHHH
Q 018256          223 -VSLV---AEKNPN-AWRLR-PDIE---LMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSM---F-KPLGMVVALVFGIA  289 (359)
Q Consensus       223 -~~~~---~~~~~~-~~~~~-~~~~---~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~s~---~-~~l~pi~~~i~~~~  289 (359)
                       ....   ...... ..... +...   ...+..++-+.=.++..+|..+-++.+......   + +-+..+++.++|.+
T Consensus       231 ~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi~  310 (345)
T PRK13499        231 GFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGLV  310 (345)
T ss_pred             HHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhhh
Confidence             1111   111111 01111 1011   111222222245567777888888776554443   3 36777999999995


Q ss_pred             HhcCccc------hhhHHHHHHHHHHHHHHHhcC
Q 018256          290 FLGDTLY------LGSFVGAATIALGFYAVIWGQ  317 (359)
Q Consensus       290 ~~ge~~~------~~~~iG~~lii~gi~l~~~~~  317 (359)
                       ++|.=+      ...++|.+++++|..+....+
T Consensus       311 -lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~~  343 (345)
T PRK13499        311 -LKEWKGASRRPVRVLSLGCVVIILAANIVGLGN  343 (345)
T ss_pred             -hhhccCCCccchhHHHHHHHHHHHHHHHHhhcc
Confidence             999766      566899999999999887654

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=98.99  E-value=2.2e-09  Score=89.36  Aligned_cols=212  Identities=15%  Similarity=0.172  Sum_probs=154.9

Q ss_pred             HHHHHHHHHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCC
Q 018256           75 LGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPIT  154 (359)
Q Consensus        75 ~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~  154 (359)
                      ..++....++.|..|++.+++++++.+..+...|+.+++++.+|+|+.      ..++++.++++.|++++...++    
T Consensus        59 F~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~------~~kIlaailAI~GiVmiay~DN----  128 (290)
T KOG4314|consen   59 FSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFM------GFKILAAILAIGGIVMIAYADN----  128 (290)
T ss_pred             eEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchh------hhhHHHHHHHhCcEEEEEeccc----
Confidence            344457889999999999999999999999999999999999999999      7799999999999998853331    


Q ss_pred             CCCCcccchhhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHH-------HHHHHHHHh
Q 018256          155 SAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTI-------LSSAVSLVA  227 (359)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~  227 (359)
                                     .....+.|..++..+++.-|+|.++-|+...+.+ --....++...+..       ...++++  
T Consensus       129 ---------------~~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn-~Gdaa~FmS~LGF~NL~~~~~~~lIL~~--  190 (290)
T KOG4314|consen  129 ---------------EHADEIIGIACAVGSAFMAALYKVLFKMFIGNAN-FGDAAHFMSCLGFFNLCFISFPALILAF--  190 (290)
T ss_pred             ---------------hhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCc-chhHHHHHHHHHHHHHHHHhhhHHHHHH--
Confidence                           1334578999999999999999999998876633 22222222222221       1122222  


Q ss_pred             cCCCCcccccCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHH
Q 018256          228 EKNPNAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIA  307 (359)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii  307 (359)
                       ...++|+......|..+...+...... -.+.+.++.-..|...|+-+....+--...+.++-+-..+.....|..+|+
T Consensus       191 -T~VE~~qsFA~~PWG~l~G~A~L~lAF-N~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~  268 (290)
T KOG4314|consen  191 -TGVEHLQSFAAAPWGCLCGAAGLSLAF-NFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIIC  268 (290)
T ss_pred             -hchHHHHHHhhCCchhhhhHHHHHHHH-hhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence             122233321222377776655433322 234467788889999999999999999999998666677888899999999


Q ss_pred             HHHHHHHhc
Q 018256          308 LGFYAVIWG  316 (359)
Q Consensus       308 ~gi~l~~~~  316 (359)
                      .|..+....
T Consensus       269 i~FiLiiiP  277 (290)
T KOG4314|consen  269 IGFILIIIP  277 (290)
T ss_pred             HhHHheecc
Confidence            999887754

>TIGR00688 rarD rarD protein

Probab=98.97  E-value=8.8e-09  Score=93.13  Aligned_cols=137  Identities=13%  Similarity=0.151  Sum_probs=107.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHhcCCC---Ccccc-cCchhHHHHHHHHHH
Q 018256          176 IGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNP---NAWRL-RPDIELMAIGYSAIF  251 (359)
Q Consensus       176 ~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~g~~  251 (359)
                      .|..+.++++++|+...+..|. ..+.+ +.+..+++++++.+.+.+.........   ..++. .....+..+...|+ 
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-   78 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LKPLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGL-   78 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hccCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHH-
Confidence            4788999999999999999997 45566 999999999999888766654332210   11110 11111333445555 


Q ss_pred             HHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHh
Q 018256          252 AVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIW  315 (359)
Q Consensus       252 ~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~  315 (359)
                      ..++.+.++++++++.++.+++.+.++.|+++.++++++++|+++..+++|.++.++|+.+...
T Consensus        79 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~  142 (256)
T TIGR00688        79 LIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIV  142 (256)
T ss_pred             HHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence            3668889999999999999999999999999999999999999999999999999999987754

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.92  E-value=2.5e-08  Score=92.12  Aligned_cols=132  Identities=18%  Similarity=0.206  Sum_probs=101.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHH
Q 018256            4 SVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQ   83 (359)
Q Consensus         4 ~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   83 (359)
                      .+.++++.++++|+...+..|.. .++.++.....   ..+.+.+.+..... .... ...+++.+...+..|+...+.+
T Consensus       156 ~G~~~~l~aa~~~A~~~v~~k~~-~~~~~~~~~~~---~~~~~~l~~~~~~~-~~~~-~~~~~~~~~~l~~~~~~t~~~~  229 (295)
T PRK11689        156 LSYGLAFIGAFIWAAYCNVTRKY-ARGKNGITLFF---ILTALALWIKYFLS-PQPA-MVFSLPAIIKLLLAAAAMGFGY  229 (295)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhc-cCCCCchhHHH---HHHHHHHHHHHHHh-cCcc-ccCCHHHHHHHHHHHHHHHHHH
Confidence            36789999999999999999994 44677765432   22333333322222 2111 2356666767777775558899


Q ss_pred             HHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHh
Q 018256           84 MFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTL  147 (359)
Q Consensus        84 ~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~  147 (359)
                      .++++++++.+++.++.+.++.|++..++++++++|++++      .+++|.++.+.|+++...
T Consensus       230 ~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~------~~~iG~~lI~~gv~~~~~  287 (295)
T PRK11689        230 AAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSF------SFWQGVAMVTAGSLLCWL  287 (295)
T ss_pred             HHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcH------HHHHHHHHHHHhHHHHhh
Confidence            9999999999999999999999999999999999999994      599999999999988743

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.92  E-value=2e-08  Score=80.31  Aligned_cols=123  Identities=14%  Similarity=0.162  Sum_probs=93.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHH
Q 018256          176 IGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSV  255 (359)
Q Consensus       176 ~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  255 (359)
                      .|.++.+.+.++-+..+++-|+-.++.+ ....... .     .......          ..    -...++.|++++++
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g-~~~~~~~-~-----~~~~~~~----------~~----p~~~i~lgl~~~~l   60 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLP-LLSHAWD-F-----IAALLAF----------GL----ALRAVLLGLAGYAL   60 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCC-CccchhH-H-----HHHHHHH----------hc----cHHHHHHHHHHHHH
Confidence            4778899999999999999999887765 3221111 0     0000000          00    12256778889999


Q ss_pred             HHHHHHHHHhcCCcceeeeccchhhHHHHHHHHH--HhcCccchhhHHHHHHHHHHHHHHHhcCcc
Q 018256          256 RSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIA--FLGDTLYLGSFVGAATIALGFYAVIWGQAK  319 (359)
Q Consensus       256 ~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~--~~ge~~~~~~~iG~~lii~gi~l~~~~~~~  319 (359)
                      ++.+|.+++++.+++.+..+..+.++...+.++.  ++||++|+.+++|+++|++|+++..+.++|
T Consensus        61 a~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~~  126 (129)
T PRK02971         61 SMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTTK  126 (129)
T ss_pred             HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCCC
Confidence            9999999999999999999988888888777875  899999999999999999999998865443

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=98.91  E-value=9.9e-08  Score=87.79  Aligned_cols=275  Identities=16%  Similarity=0.185  Sum_probs=151.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHH-HHHHHHHHHHH-H
Q 018256            3 ASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSI-VCRIFLLGLLS-C   80 (359)
Q Consensus         3 ~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~-~   80 (359)
                      ..++.+.+.++++-+....+.|.+..+ .+.   ...               +.+ ..    .++. ....++.|++. .
T Consensus         6 ~iGv~lav~ss~~~~~g~~lqk~~~~r-~~~---~~~---------------~~~-~~----~~~~l~~~~W~~G~~~~~   61 (300)
T PF05653_consen    6 YIGVLLAVVSSIFIAVGFNLQKKSHLR-LPR---GSL---------------RAG-SG----GRSYLRRPLWWIGLLLMV   61 (300)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH-hhc---ccc---------------ccc-ch----hhHHHhhHHHHHHHHHHh
Confidence            457778888888888888888875431 000   000               000 00    0111 12345566666 8


Q ss_pred             HHHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCCCCCCcc
Q 018256           81 CGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKN  160 (359)
Q Consensus        81 ~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~  160 (359)
                      .+..+.+.|+.+.|.+..+.+..+.-++..+++..++|||+++      .++.|+.+++.|..++.... +......   
T Consensus        62 ~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~------~~~~G~~l~i~G~~liv~~~-~~~~~~~---  131 (300)
T PF05653_consen   62 LGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTR------RDIVGCALIILGSVLIVIFA-PKEEPIH---  131 (300)
T ss_pred             cchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchH------hHHhhHHHHHhhheeeEEeC-CCCCCcC---
Confidence            8889999999999999999999999999999999999999994      49999999999998875443 2211110   


Q ss_pred             cchhhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHH-------HHHHHhcCCCCc
Q 018256          161 KLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSS-------AVSLVAEKNPNA  233 (359)
Q Consensus       161 ~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~  233 (359)
                       ..++....-.+............ +...+.....+|..++ + .........++++....       .+....++ ..+
T Consensus       132 -t~~~l~~~~~~~~fl~y~~~~~~-~~~~L~~~~~~r~g~~-~-i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~g-~~~  206 (300)
T PF05653_consen  132 -TLDELIALLSQPGFLVYFILVLV-LILILIFFIKPRYGRR-N-ILVYISICSLIGSFTVLSAKAISILIKLTFSG-DNQ  206 (300)
T ss_pred             -CHHHHHHHhcCcceehhHHHHHH-HHHHHHHhhcchhccc-c-eEEEEEEeccccchhhhHHHHHHHHHHHHhcC-chh
Confidence             11111111111111112111111 1122222222222221 1 22112222222221111       11111111 111


Q ss_pred             ccccCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCcceeeeccchh-hHHHHHHHHHHhcCc--cch----hhHHHHHHH
Q 018256          234 WRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLG-MVVALVFGIAFLGDT--LYL----GSFVGAATI  306 (359)
Q Consensus       234 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~-pi~~~i~~~~~~ge~--~~~----~~~iG~~li  306 (359)
                      +.  ....|..++.. +.+......+.++++++.+++.+.++.+.. ...+++-|.++++|.  .+.    ....|..++
T Consensus       207 f~--~~~~y~l~~~~-v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~i  283 (300)
T PF05653_consen  207 FT--YPLTYLLLLVL-VVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLII  283 (300)
T ss_pred             hh--hhHHHHHHHHH-HHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHH
Confidence            11  11123333222 334455556778999999999988886654 455666788889984  334    345778888


Q ss_pred             HHHHHHHHhcCcc
Q 018256          307 ALGFYAVIWGQAK  319 (359)
Q Consensus       307 i~gi~l~~~~~~~  319 (359)
                      +.|+++....|++
T Consensus       284 i~GV~lL~~~~~~  296 (300)
T PF05653_consen  284 IIGVFLLSSSKDK  296 (300)
T ss_pred             HHhhheeeccCch
Confidence            8998888655433

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=98.91  E-value=4.1e-08  Score=85.73  Aligned_cols=263  Identities=11%  Similarity=0.062  Sum_probs=186.0

Q ss_pred             CCCh--HHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhhhccchH
Q 018256           30 GASH--FILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPG  107 (359)
Q Consensus        30 ~~~p--~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi  107 (359)
                      ++.|  +.+++.+++.-..+-+.-+...+ .++ +...|   +.+...+.+......+.+-++-|.+-..-.++..+--+
T Consensus        70 gfkp~GWylTlvQf~~Ysg~glie~~~~~-~k~-r~iP~---rtY~~la~~t~gtmGLsn~SlgYLNYPtQviFKccKli  144 (367)
T KOG1582|consen   70 GFKPFGWYLTLVQFLVYSGFGLIELQLIQ-TKR-RVIPW---RTYVILAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLI  144 (367)
T ss_pred             cCcccchHHHHHHHHHHHhhhheEEEeec-ccc-eecch---hHhhhhHhhhhhccccCcCccccccCcHHHHHHhhhhh
Confidence            5553  55666666554333221111111 111 23444   45556666667777788888889888888888877777


Q ss_pred             HHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCCCCCCcccchhhhccCCCCchhHHHHHHHHHHHH
Q 018256          108 FTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVI  187 (359)
Q Consensus       108 ~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~  187 (359)
                      =+++.+.++.+.|-++      .+..+..+...|.++.++.|...                 +.+....|..+.-++-++
T Consensus       145 PVmiggifIqGkRY~v------~d~~aA~lm~lGli~FTLADs~~-----------------sPNF~~~Gv~mIsgALl~  201 (367)
T KOG1582|consen  145 PVMIGGIFIQGKRYGV------HDYIAAMLMSLGLIWFTLADSQT-----------------SPNFNLIGVMMISGALLA  201 (367)
T ss_pred             hhhheeeeeccccccH------HHHHHHHHHHHHHHhhhhccccc-----------------CCCcceeeHHHHHHHHHH
Confidence            7888889999988874      49999999999999987655322                 244567898888888888


Q ss_pred             HHHHHHHHHHHHhhCC-CchHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCch---hHHHHHHHHHHHHHHHHHHHHHH
Q 018256          188 LAIYYIVQAWIVRDYP-AELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDI---ELMAIGYSAIFAVSVRSVFHTWA  263 (359)
Q Consensus       188 ~a~~~vl~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~  263 (359)
                      -|.-.-++++..+..+ +..++.++...++.+.++......++-...|..-...   ...+.++.+. .+.++...-.-.
T Consensus       202 DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~-~gylG~~~VLal  280 (367)
T KOG1582|consen  202 DAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSL-AGYLGIVFVLAL  280 (367)
T ss_pred             HHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHH-HhHhhHHHHHHH
Confidence            8888888888777654 2467788888888888887777666655555432211   1233333333 344555555555


Q ss_pred             HhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcCcccc
Q 018256          264 LRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQAKEE  321 (359)
Q Consensus       264 l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~~~~~  321 (359)
                      ++-.++..+..+....-.++++++++++..+++.+..-|..+|+.|+++..+.++.+.
T Consensus       281 I~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~nk~  338 (367)
T KOG1582|consen  281 IKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKRNKI  338 (367)
T ss_pred             HHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCCCCC
Confidence            7778999999999999999999999999999999999999999999999998874443

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=98.89  E-value=1.4e-08  Score=88.98  Aligned_cols=240  Identities=14%  Similarity=0.090  Sum_probs=163.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHhccC-CcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHh
Q 018256           62 PQLTWSIVCRIFLLGLLSCCGQMFHYFGIENG-SPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIG  140 (359)
Q Consensus        62 ~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~-~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~  140 (359)
                      |+.+.|   .+...-.+.+..+.+.++++++- +...=.++-.-.++-+++++++++|.|-+.      .|..++.+.-+
T Consensus        60 ~kiplk---~Y~i~V~mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~------~Qy~Sv~~iTi  130 (330)
T KOG1583|consen   60 PKIPLK---DYAITVAMFFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSL------RQYSSVLMITI  130 (330)
T ss_pred             CCCchh---hhheehheeeeeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeeh------hhhhhHHhhhh
Confidence            444444   33444444577888889999886 444444555788999999999999999994      49999999999


Q ss_pred             HHHHHHhhcCCCCCCCCCcccchh-hhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhC-CCchHHHHHHHHHHHH
Q 018256          141 GALIVTLYKGLPITSAPSKNKLIN-ELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDY-PAELMVTLICSIFVTI  218 (359)
Q Consensus       141 Gv~ll~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~-~~~~~~~~~~~~~~~~  218 (359)
                      |+++.++.+.++...   +.+..+ +...++...|..|+.+...+.+.-|.-.+.+++..+++ .++-+..+|.-..+.+
T Consensus       131 GiiIcTl~s~~d~~~---~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP  207 (330)
T KOG1583|consen  131 GIIICTLFSSKDGRS---KLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLP  207 (330)
T ss_pred             hheeEEeecCcchhh---hhcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccc
Confidence            999987765444322   111111 11233456778899888888888888888888776663 3477888888887777


Q ss_pred             HHHHHHH--H------hcCC-----CCcccccCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHH
Q 018256          219 LSSAVSL--V------AEKN-----PNAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALV  285 (359)
Q Consensus       219 ~~~~~~~--~------~~~~-----~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i  285 (359)
                      ......=  .      ...+     .....  -+..|+.++.-.+ .+..+----+..-.+.++.++++...+.-.+..+
T Consensus       208 ~Flf~~~div~~~~~~~~se~~~~p~~g~~--vP~~~~yLl~n~L-~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl  284 (330)
T KOG1583|consen  208 LFLFMGDDIVSHWRLAFKSESYLIPLLGFK--VPSMWVYLLFNVL-TQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLL  284 (330)
T ss_pred             hHHHhcchHHHHHHHHhcCcceeccccCcc--ccHHHHHHHHHHH-HHHHHHHhhhhhhceecceEEEEeeeHHHHHHHh
Confidence            6655430  0      0000     01111  1224555554333 2222221222334567889999999999999999


Q ss_pred             HHHHHhcCccchhhHHHHHHHHHHHHHHHhc
Q 018256          286 FGIAFLGDTLYLGSFVGAATIALGFYAVIWG  316 (359)
Q Consensus       286 ~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~  316 (359)
                      ++.+.++.++++.-|+|.+++..|..++...
T Consensus       285 ~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~  315 (330)
T KOG1583|consen  285 FSIIYFENPFTPWHWLGAALVFFGTLLFANV  315 (330)
T ss_pred             heeeEecCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999988854

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.73  E-value=3.6e-07  Score=84.55  Aligned_cols=137  Identities=18%  Similarity=0.163  Sum_probs=101.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhCCCC--hHHHHHHHHHHHHHHHHHHHHHhhccCC----CCCCCHHHHHHHHHHHH
Q 018256            4 SVTAAMVTLEFLDVGLNTVTKAAMSRGAS--HFILVVYSNTLAIFLLVPSSFIFYRKRT----PPQLTWSIVCRIFLLGL   77 (359)
Q Consensus         4 ~~~~~~l~~~~~~g~~~~~~k~~~~~~~~--p~~~~~~R~~~a~i~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~g~   77 (359)
                      .+.++.++++++|+...+..|....++-+  ......+-.+.+.+.+............    ....+.+.+...+..|+
T Consensus       143 ~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i  222 (299)
T PRK11453        143 LGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAF  222 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHH
Confidence            57889999999999999999985432212  2233333333433333222222222110    02356677788888888


Q ss_pred             HH-HHHHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHH
Q 018256           78 LS-CCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVT  146 (359)
Q Consensus        78 ~~-~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~  146 (359)
                      +. ...+.+++.++++.+++.++.+..+.|++..++++++++|+++      ..+++|..+.+.|+++..
T Consensus       223 ~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~------~~~~iG~~lI~~gv~l~~  286 (299)
T PRK11453        223 VATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLT------GLQFLGAVLIMAGLYINV  286 (299)
T ss_pred             HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCcc------HHHHHHHHHHHHHHHHHh
Confidence            88 8999999999999999999999999999999999999999999      459999999999998763

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.70  E-value=4e-07  Score=75.44  Aligned_cols=134  Identities=18%  Similarity=0.275  Sum_probs=112.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhC------CCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCC----------CHHH
Q 018256            5 VTAAMVTLEFLDVGLNTVTKAAMSR------GASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQL----------TWSI   68 (359)
Q Consensus         5 ~~~~~l~~~~~~g~~~~~~k~~~~~------~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~----------~~~~   68 (359)
                      |..+.+.+.++.+...+..|..+.+      ..++..+..+-...+.+++.+..+..++....+..          +.+.
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            4577889999999999999998765      78999999999999999999887776554310100          2244


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHH
Q 018256           69 VCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALI  144 (359)
Q Consensus        69 ~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~l  144 (359)
                      +...+..|++....+...+..++++++-..+++.....+++.++++++++|+++.      .++.|+.+++.|+++
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~------~~~~G~~l~~~G~~~  150 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITP------LQIIGIVLALVGVLL  150 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCH------HHHHHHHHHHHHHhe
Confidence            5566667777799999999999999999999999999999999999999999995      499999999999865

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.69  E-value=9.1e-08  Score=75.20  Aligned_cols=108  Identities=12%  Similarity=0.225  Sum_probs=80.1

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHH
Q 018256          211 ICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAF  290 (359)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~  290 (359)
                      +...++.+.............+.+.......+...+..|+++...++.++.+++++.+ ..++.+..+.|+++.++++++
T Consensus         3 ~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~   81 (113)
T PF13536_consen    3 FRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLF   81 (113)
T ss_pred             HHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHH
Confidence            4455555555555544322111111111123555666677677789999999999999 588899999999999999999


Q ss_pred             hcCccchhhHHHHHHHHHHHHHHHhcCcc
Q 018256          291 LGDTLYLGSFVGAATIALGFYAVIWGQAK  319 (359)
Q Consensus       291 ~ge~~~~~~~iG~~lii~gi~l~~~~~~~  319 (359)
                      ++|+++..+++|.+++.+|+.++.+.+..
T Consensus        82 ~~er~~~~~~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   82 FKERLSPRRWLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence            99999999999999999999999987543

>TIGR00803 nst UDP-galactose transporter

Probab=98.65  E-value=8.7e-08  Score=84.74  Aligned_cols=203  Identities=11%  Similarity=0.075  Sum_probs=124.3

Q ss_pred             cchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCC-----------CCCCCCcccch
Q 018256           95 PALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLP-----------ITSAPSKNKLI  163 (359)
Q Consensus        95 ~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~-----------~~~~~~~~~~~  163 (359)
                      ........+..++++++..+...++|.+      +.|+++.++...|++.-.+.+.+.           ....+ +.++ 
T Consensus         4 vPa~~~~~s~~l~~v~l~~~~~~~~~~~------~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~-~~~~-   75 (222)
T TIGR00803         4 VPIHIIFKQNNLVLIALGNLLAAGKQVT------QLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMV-QSSA-   75 (222)
T ss_pred             ccchHHHHhcchHHHHHhcccccceeee------hHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecC-CCCc-
Confidence            3445666788999999999999999998      559999999998887542221100           00000 0000 


Q ss_pred             hhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchHH-HHHHHHHHHHHHHHHHHHhcCCC-Cccc--ccCc
Q 018256          164 NELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMV-TLICSIFVTILSSAVSLVAEKNP-NAWR--LRPD  239 (359)
Q Consensus       164 ~~~~~~~~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~  239 (359)
                         ......+...|....+.+.++-+...+++++..++.+..... .....+.+.+.........+.+. ..+.  ...+
T Consensus        76 ---~~~~~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (222)
T TIGR00803        76 ---KTLMFGNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYP  152 (222)
T ss_pred             ---cccccccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCc
Confidence               000113456777777778887777788888776654311111 11111222221111111111111 1111  0101


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHH
Q 018256          240 IELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYA  312 (359)
Q Consensus       240 ~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l  312 (359)
                      ...+.+    ++...++..+..+.+++.++...+....++++++.+++++++||+++..+++|+.+++.|+++
T Consensus       153 ~~~~~~----~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       153 TAVWIV----GLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             hHHHHH----HHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            111111    124556667788889999999999999999999999999999999999999999999988765

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.62  E-value=2.5e-07  Score=85.75  Aligned_cols=139  Identities=19%  Similarity=0.196  Sum_probs=103.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHHHHHHHHHHhhccCCCC-C-------CCHHHHHH-H
Q 018256            3 ASVTAAMVTLEFLDVGLNTVTKAAMSR-GASHFILVVYSNTLAIFLLVPSSFIFYRKRTPP-Q-------LTWSIVCR-I   72 (359)
Q Consensus         3 ~~~~~~~l~~~~~~g~~~~~~k~~~~~-~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~-~-------~~~~~~~~-~   72 (359)
                      ..+.++.++++++|+...+..|...++ +.+|.....+....+.+.+.|+..........+ .       ........ .
T Consensus       144 ~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (302)
T TIGR00817       144 WAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVS  223 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHH
Confidence            347788999999999999999985442 589999999999999988888765443211000 0       01111111 2


Q ss_pred             HHHHHHH-HHHHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHh
Q 018256           73 FLLGLLS-CCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTL  147 (359)
Q Consensus        73 ~~~g~~~-~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~  147 (359)
                      +..+... ...+.+++.+++++++..+++.....|++++++++++++|+++.      .+++|..+.+.|+.+...
T Consensus       224 ~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~------~~~~G~~lil~Gv~l~~~  293 (302)
T TIGR00817       224 LVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISP------QQVFGTGIAIAGVFLYSR  293 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCch------hHHHHHHHHHHHHHHHHH
Confidence            2333322 34446778899999999999999999999999999999999995      499999999999988743

specificities overlap.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.48  E-value=4.1e-06  Score=79.20  Aligned_cols=137  Identities=14%  Similarity=0.134  Sum_probs=99.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhC------CCChHHHHHHHHHHHHHHHHHHHHHhhccC----------CCCCCCH
Q 018256            3 ASVTAAMVTLEFLDVGLNTVTKAAMSR------GASHFILVVYSNTLAIFLLVPSSFIFYRKR----------TPPQLTW   66 (359)
Q Consensus         3 ~~~~~~~l~~~~~~g~~~~~~k~~~~~------~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~----------~~~~~~~   66 (359)
                      +.+.+..++++++|+...+..|..+.+      ..++.....+-...++++++|+........          ......+
T Consensus       193 ~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~  272 (350)
T PTZ00343        193 WLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTK  272 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccch
Confidence            457889999999999999999996652      255766666667788888888765332110          0001111


Q ss_pred             HHH-HHHHHHHHHHHHHHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHH
Q 018256           67 SIV-CRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV  145 (359)
Q Consensus        67 ~~~-~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll  145 (359)
                      ... ...+..++...+.+.+.|.+++++++...++..++.|+++.++++++++|+++      ..+++|..+++.|+++.
T Consensus       273 ~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt------~~~~iG~~lii~Gv~lY  346 (350)
T PTZ00343        273 GIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVT------LLGYLGMAVAILGALLY  346 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCc------hHhHHHHHHHHHHHHHH
Confidence            111 12222233335555556679999999999999999999999999999999999      55999999999999876

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.47  E-value=9.6e-07  Score=68.94  Aligned_cols=68  Identities=13%  Similarity=0.077  Sum_probs=62.3

Q ss_pred             HHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHh
Q 018256          248 SAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIW  315 (359)
Q Consensus       248 ~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~  315 (359)
                      .++++.++++.++.+++++.+.+.+..+..+.++++.+.+++++||+++..+++|.+++++|+.+...
T Consensus        42 ~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~  109 (111)
T PRK15051         42 LALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS  109 (111)
T ss_pred             HHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            34456788999999999999999999999999999999999999999999999999999999987653

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=98.47  E-value=2.9e-08  Score=85.58  Aligned_cols=280  Identities=16%  Similarity=0.136  Sum_probs=179.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHH
Q 018256            4 SVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQ   83 (359)
Q Consensus         4 ~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   83 (359)
                      ..++..++-++.||....++.. .  +-+|.+-..--.+.| +++....++..+    |..+.+.+..-++.|++...++
T Consensus         2 ~~~liaL~P~l~WGsip~v~~k-~--GG~p~qQ~lGtT~GA-Lifaiiv~~~~~----p~~T~~~~iv~~isG~~Ws~GQ   73 (288)
T COG4975           2 MDLLIALLPALGWGSIPLVANK-F--GGKPYQQTLGTTLGA-LIFAIIVFLFVS----PELTLTIFIVGFISGAFWSFGQ   73 (288)
T ss_pred             hhHHHHHHHHHHhcccceeeee-c--CCChhHhhhhccHHH-HHHHHHHheeec----CccchhhHHHHHHhhhHhhhhh
Confidence            4678889999999999977665 2  345665555444344 444334444322    5577787888888888889999


Q ss_pred             HHHHHHhccCCcchhhhhhc-cchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCCCCCCcccc
Q 018256           84 MFHYFGIENGSPALASAMID-LTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKL  162 (359)
Q Consensus        84 ~~~~~al~~~~~~~a~~l~~-~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~  162 (359)
                      ...+.|.++++++.+..+.+ ++-+-+-+++.+.++|-.+....  ....+++++.++|+.+-...+ +           
T Consensus        74 ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~--IlG~iAliliviG~~lTs~~~-~-----------  139 (288)
T COG4975          74 ANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQI--ILGFIALILIVIGIYLTSKQD-R-----------  139 (288)
T ss_pred             hhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhH--HHHHHHHHHHHHhheEeeeec-c-----------
Confidence            99999999999999999885 66677888899999987762100  112233344444444432111 1           


Q ss_pred             hhhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhH
Q 018256          163 INELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIEL  242 (359)
Q Consensus       163 ~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (359)
                       ++.+.++..+...|....+.+.+.|-.|.++.+...  .+ ......-+..-..+..+.... ...+.   . .....|
T Consensus       140 -~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~--v~-g~saiLPqAiGMv~~ali~~~-~~~~~---~-~~K~t~  210 (288)
T COG4975         140 -NNKEEENPSNLKKGIVILLISTLGYVGYVVLFQLFD--VD-GLSAILPQAIGMVIGALILGF-FKMEK---R-FNKYTW  210 (288)
T ss_pred             -ccccccChHhhhhheeeeeeeccceeeeEeeecccc--cc-chhhhhHHHHHHHHHHHHHhh-ccccc---c-hHHHHH
Confidence             111122355677899999999999999998887543  22 333332222222222222222 21111   1 111123


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhh----HHHHHHHHHHHHHHHhc
Q 018256          243 MAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGS----FVGAATIALGFYAVIWG  316 (359)
Q Consensus       243 ~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~----~iG~~lii~gi~l~~~~  316 (359)
                      ..+ ..|+ .=..+-..+..+.++.+..+.-.+.-+..+.+.+-|.++++|+-|..+    ++|.+++++|..+....
T Consensus       211 ~ni-i~G~-~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg~~  286 (288)
T COG4975         211 LNI-IPGL-IWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLGIA  286 (288)
T ss_pred             HHH-hhHH-HHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhhee
Confidence            333 2333 234566777788889998888888888999999999999999988765    57888888887766543

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.41  E-value=2.4e-06  Score=66.67  Aligned_cols=66  Identities=21%  Similarity=0.295  Sum_probs=60.1

Q ss_pred             HHHHHH-HHHHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHH
Q 018256           74 LLGLLS-CCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV  145 (359)
Q Consensus        74 ~~g~~~-~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll  145 (359)
                      ..++++ .....++..++++.|.+.+..+.++.++++.+++++++|||++++      +++|+.+.+.|++++
T Consensus        41 ~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~------~~~Gi~lii~Gv~~i  107 (111)
T PRK15051         41 GLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPR------HWCGVAFIIGGIVIL  107 (111)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHH
Confidence            344455 889999999999999999999999999999999999999999955      999999999999887

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.41  E-value=7.9e-06  Score=74.65  Aligned_cols=132  Identities=17%  Similarity=0.205  Sum_probs=102.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHH-HHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH-H
Q 018256            3 ASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVV-YSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLS-C   80 (359)
Q Consensus         3 ~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~-~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~   80 (359)
                      ..+.++.+.++++|+...+..|...  ..++..... +..........+..  .....  ...+.+.+......|+++ .
T Consensus       153 ~~g~~~~l~a~~~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~g~~~~~  226 (292)
T COG0697         153 LLGLLLALAAALLWALYTALVKRLS--RLGPVTLALLLQLLLALLLLLLFF--LSGFG--APILSRAWLLLLYLGVFSTG  226 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHH--hcccc--ccCCHHHHHHHHHHHHHHHH
Confidence            4688899999999999999999844  456666666 44332222222211  11111  235567788888899888 6


Q ss_pred             HHHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHH
Q 018256           81 CGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVT  146 (359)
Q Consensus        81 ~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~  146 (359)
                      .++.+++.+++..+++.++.+..+.|++..++++++++|+++      ..+++|.++.+.|+.+..
T Consensus       227 i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~------~~~~~G~~li~~g~~l~~  286 (292)
T COG0697         227 LAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLS------PAQLLGAALVVLGVLLAS  286 (292)
T ss_pred             HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCc------HHHHHHHHHHHHHHHHHh
Confidence            799999999999999999999999999999999999999999      459999999999988873

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.38  E-value=7.2e-06  Score=75.50  Aligned_cols=129  Identities=17%  Similarity=0.128  Sum_probs=100.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHH---HHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH
Q 018256            3 ASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNT---LAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLS   79 (359)
Q Consensus         3 ~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~---~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   79 (359)
                      .+++...+++++.++......|..   +.+|...++....   ++..++....   ++ .+ |. +.+..+..++.|++.
T Consensus       151 ~~Gi~~~l~sg~~y~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~---~~-~~-~~-~~~~~~~~~~~Gi~~  221 (290)
T TIGR00776       151 KKGILLLLMSTIGYLVYVVVAKAF---GVDGLSVLLPQAIGMVIGGIIFNLGH---IL-AK-PL-KKYAILLNILPGLMW  221 (290)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHc---CCCcceehhHHHHHHHHHHHHHHHHH---hc-cc-ch-HHHHHHHHHHHHHHH
Confidence            679999999999999999999973   3788887555443   3333332211   11 12 22 334444556688888


Q ss_pred             HHHHHHHHHHhc-cCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccc----hhHHHHHhHHHHHH
Q 018256           80 CCGQMFHYFGIE-NGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKS----FGTVLLIGGALIVT  146 (359)
Q Consensus        80 ~~~~~~~~~al~-~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~----~g~~l~~~Gv~ll~  146 (359)
                      ...+.+++.+.+ +.+++.+..+.+..|+...+.+++++||+.+++      ++    +|.++.+.|+.++.
T Consensus       222 ~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~------~~~~~~iG~~lIi~~~~l~~  287 (290)
T TIGR00776       222 GIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKR------EMIAISVGIILIIIAANILG  287 (290)
T ss_pred             HHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcc------eeehhHHHHHHHHHHHHHHh
Confidence            999999999999 999999999999999999999999999999955      88    99999999988873

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.30  E-value=8.4e-06  Score=72.67  Aligned_cols=140  Identities=13%  Similarity=0.180  Sum_probs=111.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCccc-ccCchhHHHHHHHHHHHH
Q 018256          175 TIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWR-LRPDIELMAIGYSAIFAV  253 (359)
Q Consensus       175 ~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~  253 (359)
                      ..|.++++.+-+.|+.--.+.|-. +..+ +.++..++.+.+.+....+.........-++ ...+..+......++. -
T Consensus         6 ~~Gil~~l~Ay~lwG~lp~y~kll-~~~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l-i   82 (293)
T COG2962           6 RKGILLALLAYLLWGLLPLYFKLL-EPLP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL-I   82 (293)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHH-ccCC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH-H
Confidence            469999999999999987777754 5566 8999999999999988777765544322222 1222235555555553 4


Q ss_pred             HHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcC
Q 018256          254 SVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQ  317 (359)
Q Consensus       254 ~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~  317 (359)
                      ......|.|+..+....++|.-.++.|.+.+++|.++++|+++..|++..++-.+|+....+..
T Consensus        83 ~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~  146 (293)
T COG2962          83 GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLL  146 (293)
T ss_pred             HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc
Confidence            4778999999999999999999999999999999999999999999999999999998877543

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=98.28  E-value=3.5e-06  Score=75.92  Aligned_cols=227  Identities=19%  Similarity=0.181  Sum_probs=134.3

Q ss_pred             HHHHHHHHH-HHHHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhc
Q 018256           71 RIFLLGLLS-CCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYK  149 (359)
Q Consensus        71 ~~~~~g~~~-~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~  149 (359)
                      +.++.|++. .++....|.|..+.|.+..+.+..+.-++.++++..++|||++++      ..+|..++++|-.+++.+.
T Consensus        65 ~~Ww~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~------g~lGc~l~v~Gst~iV~ha  138 (335)
T KOG2922|consen   65 PLWWAGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLL------GILGCVLCVVGSTTIVIHA  138 (335)
T ss_pred             HHHHHHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHh------hhhheeEEecccEEEEEec
Confidence            455678888 999999999999999999999999999999999999999999955      9999999999998886543


Q ss_pred             CCCCCCCCCcccchhhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHH-------HH
Q 018256          150 GLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILS-------SA  222 (359)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~-------~~  222 (359)
                       |......+..+.    ...-.+...+.....+...++.=+  ...|+.. ...+.+.+.....++|+...       ..
T Consensus       139 -P~e~~i~t~~el----~~~~~~~~Fliy~~~iil~~~il~--~~~~p~~-g~tnilvyi~i~s~iGS~tV~svKalg~a  210 (335)
T KOG2922|consen  139 -PKEQEIESVEEV----WELATEPGFLVYVIIIILIVLILI--FFYAPRY-GQTNILVYIGICSLIGSLTVMSVKALGIA  210 (335)
T ss_pred             -CcccccccHHHH----HHHhcCccHHHHHHHHHHHHHHHh--eeecccc-cccceeehhhHhhhhcceeeeeHHHHHHH
Confidence             322211111111    010111111222222111111111  1112111 11124444444444442211       11


Q ss_pred             HHHHhcC-CCCcccccCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCcceeeeccch-hhHHHHHHHHHHhcCccc--h-
Q 018256          223 VSLVAEK-NPNAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPL-GMVVALVFGIAFLGDTLY--L-  297 (359)
Q Consensus       223 ~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l-~pi~~~i~~~~~~ge~~~--~-  297 (359)
                      +-....+ +....    ...|..++.... +...-.-..++|++..+++.++.+.+. -..++++-+.++++|.-.  . 
T Consensus       211 iklt~~g~~ql~~----~~ty~~~l~~~~-~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~  285 (335)
T KOG2922|consen  211 IKLTFSGNNQLFY----PLTWIFLLVVAT-CVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDAL  285 (335)
T ss_pred             HHHHhcCCccccc----HHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHH
Confidence            1111121 21111    123444443332 444445566799999999998888654 456667778899988433  2 


Q ss_pred             ---hhHHHHHHHHHHHHHHHhc
Q 018256          298 ---GSFVGAATIALGFYAVIWG  316 (359)
Q Consensus       298 ---~~~iG~~lii~gi~l~~~~  316 (359)
                         ...+|+..++.|+.+....
T Consensus       286 ~i~~~~~Gf~ti~~G~flL~~~  307 (335)
T KOG2922|consen  286 DIAGELCGFVTIFLGIFLLHRT  307 (335)
T ss_pred             HHHHHHHhHHHhhheeeEeeee
Confidence               3568889999998888443

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=98.24  E-value=1.5e-05  Score=69.41  Aligned_cols=132  Identities=12%  Similarity=0.040  Sum_probs=111.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH-HHH
Q 018256            4 SVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLS-CCG   82 (359)
Q Consensus         4 ~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~   82 (359)
                      .+..+.+.+..+|+..-+..|.+-. ..+...-+..-+++++++.+|+-.-.....   -++++.....+..++++ ++.
T Consensus       148 ~Gv~~Al~AG~~Wa~YIv~G~r~g~-~~~g~~g~a~gm~vAaviv~Pig~~~ag~~---l~~p~ll~laLgvavlSSalP  223 (292)
T COG5006         148 VGVALALGAGACWALYIVLGQRAGR-AEHGTAGVAVGMLVAALIVLPIGAAQAGPA---LFSPSLLPLALGVAVLSSALP  223 (292)
T ss_pred             HHHHHHHHHhHHHHHHHHHcchhcc-cCCCchHHHHHHHHHHHHHhhhhhhhcchh---hcChHHHHHHHHHHHHhcccc
Confidence            4677888899999999999998553 456666677778899999999875444333   36778888888999999 999


Q ss_pred             HHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHH
Q 018256           83 QMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV  145 (359)
Q Consensus        83 ~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll  145 (359)
                      +.+-..++++.+...-+.+.++.|.+..+.++++++|+++..      ||.++...+.+..-.
T Consensus       224 YsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~------qwlaI~~ViaAsaG~  280 (292)
T COG5006         224 YSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLI------QWLAIAAVIAASAGS  280 (292)
T ss_pred             hHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHH------HHHHHHHHHHHHhcc
Confidence            999999999999999999999999999999999999999955      999998888776544

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=98.24  E-value=1.7e-05  Score=73.77  Aligned_cols=140  Identities=11%  Similarity=0.010  Sum_probs=108.2

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCC--CHHHHHHHHHHHHHH
Q 018256            2 GASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQL--TWSIVCRIFLLGLLS   79 (359)
Q Consensus         2 ~~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~   79 (359)
                      +.++=++++.+++++|.+.++.+.... +.++..+..+-.+.+.++..+.+...+++.. .++  +++....++..++..
T Consensus       166 ~i~GDll~l~~a~lya~~nV~~E~~v~-~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i-~~~~w~~~~~~~~v~~~~~l  243 (334)
T PF06027_consen  166 PILGDLLALLGAILYAVSNVLEEKLVK-KAPRVEFLGMLGLFGFIISGIQLAILERSGI-ESIHWTSQVIGLLVGYALCL  243 (334)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHhcc-cCCHHHHHHHHHHHHHHHHHHHHHheehhhh-hccCCChhhHHHHHHHHHHH
Confidence            467778999999999999999998655 6788888888888888888777666665543 333  344333333333333


Q ss_pred             HHHHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhc
Q 018256           80 CCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYK  149 (359)
Q Consensus        80 ~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~  149 (359)
                      +..+.+.-..++++++....+-..+..+++.+++++++|++++      +...+|.++.++|.++....+
T Consensus       244 f~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~------~ly~~af~lIiiG~vvy~~~~  307 (334)
T PF06027_consen  244 FLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFS------WLYILAFALIIIGFVVYNLAE  307 (334)
T ss_pred             HHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCcccc------HHHHHHHHHHHHHhheEEccC
Confidence            6667777788899999887777788899999999999999999      569999999999998875433

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.21  E-value=2.5e-05  Score=62.57  Aligned_cols=117  Identities=16%  Similarity=0.146  Sum_probs=87.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH-HHH
Q 018256            4 SVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLS-CCG   82 (359)
Q Consensus         4 ~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~   82 (359)
                      ++++++++..++-+..-++.|..++ ..+....... . ...+    ..  .        .++   ..++..|++. .+.
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~-~~g~~~~~~~-~-~~~~----~~--~--------~~p---~~~i~lgl~~~~la   61 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMS-RLPLLSHAWD-F-IAAL----LA--F--------GLA---LRAVLLGLAGYALS   61 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHh-hCCCccchhH-H-HHHH----HH--H--------hcc---HHHHHHHHHHHHHH
Confidence            5778888888888999999999876 3333222111 1 0000    00  0        111   2346777777 999


Q ss_pred             HHHHHHHhccCCcchhhhhhccchHHHHHHHHH--HhhccccceeccccccchhHHHHHhHHHHHH
Q 018256           83 QMFHYFGIENGSPALASAMIDLTPGFTFILAII--FRMEKLELRVQSSQAKSFGTVLLIGGALIVT  146 (359)
Q Consensus        83 ~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l--~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~  146 (359)
                      ..++..++++.+.+.+..+....+.++.+.++.  ++||+++++      +++|+++.++|++++.
T Consensus        62 ~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~------~~iGi~lIi~GV~lv~  121 (129)
T PRK02971         62 MLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLK------KTLGVACIMLGVWLIN  121 (129)
T ss_pred             HHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHhc
Confidence            999999999999999999999998888888874  899999955      9999999999999984

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=98.00  E-value=6e-05  Score=59.30  Aligned_cols=70  Identities=17%  Similarity=0.357  Sum_probs=59.2

Q ss_pred             HHHHHHHHHHHHHHHHhcCCcceeeec-cchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcCc
Q 018256          249 AIFAVSVRSVFHTWALRKKGPVYVSMF-KPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQA  318 (359)
Q Consensus       249 g~~~~~~~~~~~~~~l~~~~~~~~s~~-~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~~  318 (359)
                      .+...++++.++.+++++.+...+=.+ ..+.-+.+.+.+++++||++++.+++|..+|++|++......+
T Consensus        36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~~  106 (120)
T PRK10452         36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGTR  106 (120)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCCC
Confidence            344667889999999999988776544 4678888999999999999999999999999999988866543

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.81  E-value=0.00022  Score=55.36  Aligned_cols=68  Identities=16%  Similarity=0.193  Sum_probs=58.0

Q ss_pred             HHHHHHHHHHHHHHHhcCCcceeeec-cchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcC
Q 018256          250 IFAVSVRSVFHTWALRKKGPVYVSMF-KPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQ  317 (359)
Q Consensus       250 ~~~~~~~~~~~~~~l~~~~~~~~s~~-~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~  317 (359)
                      +.+.++++.++..++++.+.+.+=.. ..+.-+.+.+.+++++||++++.+++|..+|++|++......
T Consensus        37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            44667889999999999888775444 557888889999999999999999999999999999987654

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.80  E-value=0.00033  Score=64.95  Aligned_cols=127  Identities=17%  Similarity=0.204  Sum_probs=95.2

Q ss_pred             HHHHHHHHHhhC-CC--chHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 018256          191 YYIVQAWIVRDY-PA--ELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKK  267 (359)
Q Consensus       191 ~~vl~k~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~  267 (359)
                      +.+++++..++. ..  +..+++.++....+...+..........  .   ...+......++ ...++..+-+.++++.
T Consensus        15 ~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~-~~~~~~~~~~~al~~i   88 (303)
T PF08449_consen   15 YGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPKS--R---KIPLKKYAILSF-LFFLASVLSNAALKYI   88 (303)
T ss_pred             HHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccCC--C---cChHHHHHHHHH-HHHHHHHHHHHHHHhC
Confidence            446677665542 22  6788888888888877776654431111  1   112333444444 5667778889999999


Q ss_pred             CcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcCcccccc
Q 018256          268 GPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQAKEEKM  323 (359)
Q Consensus       268 ~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~~~~~~~  323 (359)
                      +.....+.....|+.+.+++++++|++.+..++++.+++.+|+.+....+.+..+.
T Consensus        89 ~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~  144 (303)
T PF08449_consen   89 SYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSS  144 (303)
T ss_pred             ChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccc
Confidence            99999999999999999999999999999999999999999999999876554433

; GO: 0055085 transmembrane transport

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=97.80  E-value=6e-06  Score=72.36  Aligned_cols=140  Identities=9%  Similarity=0.096  Sum_probs=96.4

Q ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHH
Q 018256          171 LSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAI  250 (359)
Q Consensus       171 ~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  250 (359)
                      ++...+|..+...+ ..+....++.++..++.  |.......+++-..+..+..+....+  .|.......|+  ++=|+
T Consensus        33 ~d~p~~gl~l~~vs-~ff~~~~vv~t~~~e~~--p~e~a~~r~l~~mlit~pcliy~~~~--v~gp~g~R~~L--iLRg~  105 (346)
T KOG4510|consen   33 KDKPNLGLLLLTVS-YFFNSCMVVSTKVLEND--PMELASFRLLVRMLITYPCLIYYMQP--VIGPEGKRKWL--ILRGF  105 (346)
T ss_pred             cCCCccCceehhhH-HHHhhHHHhhhhhhccC--hhHhhhhhhhhehhhhheEEEEEeee--eecCCCcEEEE--Eeehh
Confidence            34567788888888 77788888888877664  45555555444444443333211111  11111111122  22233


Q ss_pred             HHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcCc
Q 018256          251 FAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQA  318 (359)
Q Consensus       251 ~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~~  318 (359)
                      .++ .+..+.++++++.+-+.++++.+..|++++++++++++|+.|....+|..+.+.|+++..+..-
T Consensus       106 mG~-tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpF  172 (346)
T KOG4510|consen  106 MGF-TGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPF  172 (346)
T ss_pred             hhh-hHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCc
Confidence            333 4556677899999999999999999999999999999999999999999999999999886543

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=97.64  E-value=0.00016  Score=66.60  Aligned_cols=123  Identities=20%  Similarity=0.255  Sum_probs=88.5

Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHH
Q 018256          172 SNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIF  251 (359)
Q Consensus       172 ~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  251 (359)
                      .++..|..+++.++++.+....++|+...+.+ ....-.                 .......-.+   ..|+.   |+.
T Consensus         3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~-~~~~~~-----------------~~~~~~~l~~---~~W~~---G~~   58 (300)
T PF05653_consen    3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLP-RGSLRA-----------------GSGGRSYLRR---PLWWI---GLL   58 (300)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cccccc-----------------cchhhHHHhh---HHHHH---HHH
Confidence            45678999999999999999999998766644 100000                 0000000000   11211   222


Q ss_pred             HHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcCc
Q 018256          252 AVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQA  318 (359)
Q Consensus       252 ~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~~  318 (359)
                      ...++..+...++...+++.++.+..+..++..+++..+++|+++...++|+++++.|..+......
T Consensus        59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~  125 (300)
T PF05653_consen   59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAP  125 (300)
T ss_pred             HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCC
Confidence            3345556677788889999999999999999999999999999999999999999999988775443

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.63  E-value=0.0011  Score=53.92  Aligned_cols=132  Identities=10%  Similarity=0.074  Sum_probs=96.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHH
Q 018256          177 GGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSVR  256 (359)
Q Consensus       177 G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  256 (359)
                      ..++++.++++-++-..++.++.++..+|....+..+..+.+.+.+..++.++.  .+......+|+..+ -|++ ....
T Consensus         2 ~~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p~w~~l-GG~l-G~~~   77 (138)
T PF04657_consen    2 YILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRP--SLASLSSVPWWAYL-GGLL-GVFF   77 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCChHHhc-cHHH-HHHH
Confidence            356788889999999999999888877799999999999999998888776653  22211122344443 3443 3345


Q ss_pred             HHHHHHHHhcCCcceeeec-cchhhHHHHHHHHH----HhcCccchhhHHHHHHHHHHHHH
Q 018256          257 SVFHTWALRKKGPVYVSMF-KPLGMVVALVFGIA----FLGDTLYLGSFVGAATIALGFYA  312 (359)
Q Consensus       257 ~~~~~~~l~~~~~~~~s~~-~~l~pi~~~i~~~~----~~ge~~~~~~~iG~~lii~gi~l  312 (359)
                      ..+.....++.++...... ..-+.+.+++++.+    .-++++++.+++|.+++++|+++
T Consensus        78 V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   78 VLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            5666788899998887666 44566777888885    23468899999999999999864

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=97.61  E-value=0.00061  Score=61.14  Aligned_cols=131  Identities=16%  Similarity=0.114  Sum_probs=93.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHH
Q 018256            3 ASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCG   82 (359)
Q Consensus         3 ~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   82 (359)
                      .|++..++++++.+....++.|.  . +++|....+=.. ++.++-..+.....++    +...|..+.-++.|++...+
T Consensus       137 ~kgi~~Ll~stigy~~Y~~~~~~--~-~~~~~~~~lPqa-iGm~i~a~i~~~~~~~----~~~~k~~~~nil~G~~w~ig  208 (269)
T PF06800_consen  137 KKGILALLISTIGYWIYSVIPKA--F-HVSGWSAFLPQA-IGMLIGAFIFNLFSKK----PFFEKKSWKNILTGLIWGIG  208 (269)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHh--c-CCChhHhHHHHH-HHHHHHHHHHhhcccc----cccccchHHhhHHHHHHHHH
Confidence            57889999999999999998887  2 478877666443 4444333222222221    22334456668899999999


Q ss_pred             HHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHH
Q 018256           83 QMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGAL  143 (359)
Q Consensus        83 ~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~  143 (359)
                      +.+++.+.+..+.+.+-.+..+..++..+-+.+++||+=+.|..  ...++|+++.++|.+
T Consensus       209 nl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~--~~~~~G~~Liv~G~i  267 (269)
T PF06800_consen  209 NLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEM--IYTLIGLILIVIGAI  267 (269)
T ss_pred             HHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhH--HHHHHHHHHHHHhhh
Confidence            99999999999999999999999999999999999999875411  123345555555543

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.47  E-value=0.0015  Score=50.47  Aligned_cols=63  Identities=16%  Similarity=0.244  Sum_probs=54.7

Q ss_pred             HHHHHHHHHHHHHhcCCccee-eeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHH
Q 018256          252 AVSVRSVFHTWALRKKGPVYV-SMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVI  314 (359)
Q Consensus       252 ~~~~~~~~~~~~l~~~~~~~~-s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~  314 (359)
                      +..+++.+...++|+.|...+ ++...+..+.+.+.+++++||++++.+++|.++|+.|+....
T Consensus        44 ~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         44 AVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            567889999999999987764 445667888889999999999999999999999999998764

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.35  E-value=0.0019  Score=49.63  Aligned_cols=66  Identities=21%  Similarity=0.349  Sum_probs=56.6

Q ss_pred             HHHHHHHHHHHHHHHhcCCccee-eeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHh
Q 018256          250 IFAVSVRSVFHTWALRKKGPVYV-SMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIW  315 (359)
Q Consensus       250 ~~~~~~~~~~~~~~l~~~~~~~~-s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~  315 (359)
                      +.+..+++.+...++|+.|...+ ++...+..+.+.+.+++++||++++.+++|..+|++|++....
T Consensus        36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l  102 (105)
T PRK11431         36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL  102 (105)
T ss_pred             HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence            33567889999999999887764 4556688889999999999999999999999999999988754

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.31  E-value=0.0018  Score=60.50  Aligned_cols=139  Identities=10%  Similarity=0.052  Sum_probs=91.0

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHH--HHHHHHHHH-HHHHHhcCCC-CcccccCchhHHHHHHH
Q 018256          173 NWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLIC--SIFVTILSS-AVSLVAEKNP-NAWRLRPDIELMAIGYS  248 (359)
Q Consensus       173 ~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~  248 (359)
                      +...|.++++++++|++.+.+-.|| .++.+  .+.. |-  .++..++.. ..+.+..++. ......+...+..-+..
T Consensus         4 ~~~~G~~~~~i~~~~~GS~~~p~K~-~k~w~--wE~~-W~v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~   79 (345)
T PRK13499          4 AIILGIIWHLIGGASSGSFYAPFKK-VKKWS--WETM-WSVGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLF   79 (345)
T ss_pred             hhHHHHHHHHHHHHHhhcccccccc-cCCCc--hhHH-HHHHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHH
Confidence            4578999999999999999999998 44443  2222 32  112221111 1111122222 12221222234444444


Q ss_pred             HHHHHHHHHHHHHHHHhcCCcceeeec-cchhhHHHHHHHHHHhcCcc---c----hhhHHHHHHHHHHHHHHHhc
Q 018256          249 AIFAVSVRSVFHTWALRKKGPVYVSMF-KPLGMVVALVFGIAFLGDTL---Y----LGSFVGAATIALGFYAVIWG  316 (359)
Q Consensus       249 g~~~~~~~~~~~~~~l~~~~~~~~s~~-~~l~pi~~~i~~~~~~ge~~---~----~~~~iG~~lii~gi~l~~~~  316 (359)
                      |+ .=.++...+..++++.+.+....+ .-++.+.+.+++.+++||..   +    ....+|.+++++|+.+..+.
T Consensus        80 G~-~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~A  154 (345)
T PRK13499         80 GA-LWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRA  154 (345)
T ss_pred             HH-HHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHh
Confidence            54 466889999999999999887666 67888999999999999764   2    33578999999999999984

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.30  E-value=0.0038  Score=50.65  Aligned_cols=130  Identities=15%  Similarity=0.137  Sum_probs=91.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCC-hHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 018256            6 TAAMVTLEFLDVGLNTVTKAAMSRGAS-HFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQM   84 (359)
Q Consensus         6 ~~~~l~~~~~~g~~~~~~k~~~~~~~~-p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   84 (359)
                      ++..+++..+-+.+..++-. +.+..+ |....+.-+..+.+++..+....+++.. .+.+ +.-++...-|+++.....
T Consensus         3 ~lla~~aG~~i~~q~~~N~~-L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~-~~~~-~~p~w~~lGG~lG~~~V~   79 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQ-LGKALGSPLVASFISFGVGFILLLIILLITGRPSL-ASLS-SVPWWAYLGGLLGVFFVL   79 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHH-HHHHhCccHHHHHHHHHHHHHHHHHHHHHhccccc-chhc-cCChHHhccHHHHHHHHH
Confidence            34556666777777777766 333555 9999999999999988777666655422 2222 222455568899999999


Q ss_pred             HHHHHhccCCcchhhhhhccch-HHHHHHHHH----HhhccccceeccccccchhHHHHHhHHHH
Q 018256           85 FHYFGIENGSPALASAMIDLTP-GFTFILAII----FRMEKLELRVQSSQAKSFGTVLLIGGALI  144 (359)
Q Consensus        85 ~~~~al~~~~~~~a~~l~~~~P-i~~~lls~l----~~~E~~~~~~~~~~~~~~g~~l~~~Gv~l  144 (359)
                      +..+.++..+++.+..+.-+.- +...+++.+    .-|++++      ..|.+|+++.++|+++
T Consensus        80 ~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~------~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   80 SNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFS------LRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCC------HHHHHHHHHHHHHHhC
Confidence            9999999999999888775444 444445543    3556676      5599999999999863

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.29  E-value=0.00089  Score=51.01  Aligned_cols=66  Identities=20%  Similarity=0.332  Sum_probs=56.9

Q ss_pred             HHHHHHHHHHHHHhcCCccee-eeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcC
Q 018256          252 AVSVRSVFHTWALRKKGPVYV-SMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQ  317 (359)
Q Consensus       252 ~~~~~~~~~~~~l~~~~~~~~-s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~  317 (359)
                      +..++|.+...++|+.+...+ ++......+.+.+.+++++||++++.+++|..++++|+.......
T Consensus        39 ~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~s  105 (106)
T COG2076          39 GYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLGS  105 (106)
T ss_pred             HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhcC
Confidence            456889999999999887664 556778888899999999999999999999999999999877643

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=97.26  E-value=0.0006  Score=52.81  Aligned_cols=109  Identities=17%  Similarity=0.227  Sum_probs=75.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHH-HHHHHHHHHH
Q 018256           10 VTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLL-SCCGQMFHYF   88 (359)
Q Consensus        10 l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~   88 (359)
                      ++.+++||...+++|.+.. +.++..-.. |..-....+     +         .++    ++. ..+. +-.+...|++
T Consensus         2 l~Vg~~WG~Tnpfik~g~~-~~~~~~~~~-~~~~~~~~L-----l---------~n~----~y~-ipf~lNq~GSv~f~~   60 (113)
T PF10639_consen    2 LLVGILWGCTNPFIKRGSS-GLEKVKASL-QLLQEIKFL-----L---------LNP----KYI-IPFLLNQSGSVLFFL   60 (113)
T ss_pred             eeehHHhcCchHHHHHHHh-hcCCccchH-HHHHHHHHH-----H---------HhH----HHH-HHHHHHHHHHHHHHH
Confidence            4578999999999999765 444433331 321111110     0         112    222 2333 4888999999


Q ss_pred             HhccCCcchhhhhh-ccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHH
Q 018256           89 GIENGSPALASAMI-DLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV  145 (359)
Q Consensus        89 al~~~~~~~a~~l~-~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll  145 (359)
                      .+...+.|.+..+. .+.=+||++.++++.+|..++      ..++|+.+.+.|+.+.
T Consensus        61 ~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~------~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   61 LLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISR------RTWLGMALILAGVALC  112 (113)
T ss_pred             HHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccch------hHHHHHHHHHcCeeee
Confidence            99999999999996 677788888888877777774      4899999999998754

Many members are annotated as potential transmembrane proteins.

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.16  E-value=0.0074  Score=46.65  Aligned_cols=66  Identities=17%  Similarity=0.120  Sum_probs=55.3

Q ss_pred             HHHHHHHHHHHHHHHHhccCCcchhhhhh-ccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHH
Q 018256           74 LLGLLSCCGQMFHYFGIENGSPALASAMI-DLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV  145 (359)
Q Consensus        74 ~~g~~~~~~~~~~~~al~~~~~~~a~~l~-~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll  145 (359)
                      ..-+....++.+...++++.|.+.+=.+- ..--+.+.+.+++++||++++.      +++|+.+.+.|++.+
T Consensus        40 ~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~------~~~gi~lIi~GVi~l  106 (109)
T PRK10650         40 LSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRK------GWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHh
Confidence            33333378889999999999999976554 5777889999999999999954      999999999999886

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=97.14  E-value=0.0021  Score=48.36  Aligned_cols=56  Identities=25%  Similarity=0.446  Sum_probs=34.9

Q ss_pred             HHHHHHHHHHHHHHhcCCccee-eeccchhhHHHHHHHHHHhcCccchhhHHHHHHH
Q 018256          251 FAVSVRSVFHTWALRKKGPVYV-SMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATI  306 (359)
Q Consensus       251 ~~~~~~~~~~~~~l~~~~~~~~-s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~li  306 (359)
                      .+.++++.++.+++|+.+.+.+ .+...+..+.+.+.|.+++||++|+.+++|..+|
T Consensus        37 ~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   37 VGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            3677889999999999998887 4456689999999999999999999999999876

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=97.14  E-value=0.003  Score=58.44  Aligned_cols=138  Identities=11%  Similarity=0.135  Sum_probs=110.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhC---CCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCC---CHHHHHHHHHHH
Q 018256            3 ASVTAAMVTLEFLDVGLNTVTKAAMSR---GASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQL---TWSIVCRIFLLG   76 (359)
Q Consensus         3 ~~~~~~~l~~~~~~g~~~~~~k~~~~~---~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~g   76 (359)
                      ..|-++.+++++++|...++.|.-.++   .+|...+-.+-.++..++++|..++.+.... +++   +..+...++..+
T Consensus       246 llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~-e~F~lP~~~q~~~vv~~~  324 (416)
T KOG2765|consen  246 LLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGE-ERFELPSSTQFSLVVFNN  324 (416)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhcc-CcccCCCCceeEeeeHhh
Confidence            567889999999999999999985542   3677777777788999999987665544322 222   334455677888


Q ss_pred             HHH-HHHHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHh
Q 018256           77 LLS-CCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTL  147 (359)
Q Consensus        77 ~~~-~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~  147 (359)
                      +++ .+..++|.+|.-.+++-.+++-+.++--..++...++.+.+++      ....+|.+..++|-+++..
T Consensus       325 ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S------~~~iiGsi~Ifv~Fv~vn~  390 (416)
T KOG2765|consen  325 LIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPS------ALYIIGSIPIFVGFVIVNI  390 (416)
T ss_pred             HHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCC------HHHHHHHHHHHHHHhheec
Confidence            999 9999999999999999999998887777788888999999998      6699999999999887743

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.11  E-value=0.009  Score=48.64  Aligned_cols=140  Identities=12%  Similarity=0.090  Sum_probs=93.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHH
Q 018256          175 TIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVS  254 (359)
Q Consensus       175 ~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  254 (359)
                      .+..++.+.++++-.+-.-.+.++.+...+|..-....+..+++.+..+.+..+... .+.......|+..+. |+++. 
T Consensus         4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~-~~a~~~~~pwW~~~G-G~lGa-   80 (150)
T COG3238           4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHP-GLAAVASAPWWAWIG-GLLGA-   80 (150)
T ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCC-chhhccCCchHHHHc-cchhh-
Confidence            456788889999999999999999888877999999999999999988887744432 222222223554432 23222 


Q ss_pred             HHHHHHHHHHhcCCccee-eeccchhhHHHHHHHHHHhc----CccchhhHHHHHHHHHHHHHHHhcC
Q 018256          255 VRSVFHTWALRKKGPVYV-SMFKPLGMVVALVFGIAFLG----DTLYLGSFVGAATIALGFYAVIWGQ  317 (359)
Q Consensus       255 ~~~~~~~~~l~~~~~~~~-s~~~~l~pi~~~i~~~~~~g----e~~~~~~~iG~~lii~gi~l~~~~~  317 (359)
                      +--..-....+|.+++.. .....-+-+.+.+.|.+=+.    .+++...++|.+++++|+++..+.+
T Consensus        81 ~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~~  148 (150)
T COG3238          81 IFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRFG  148 (150)
T ss_pred             hhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcccc
Confidence            222233455666666543 33455566667777665333    4789999999999999965555443

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=97.02  E-value=0.0024  Score=58.91  Aligned_cols=137  Identities=10%  Similarity=0.086  Sum_probs=108.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHh---CCCChHHHHHHHHHHHHHHHH-HHHHHhhccCC---C-CCCCHHHHHHHHH
Q 018256            3 ASVTAAMVTLEFLDVGLNTVTKAAMS---RGASHFILVVYSNTLAIFLLV-PSSFIFYRKRT---P-PQLTWSIVCRIFL   74 (359)
Q Consensus         3 ~~~~~~~l~~~~~~g~~~~~~k~~~~---~~~~p~~~~~~R~~~a~i~l~-~~~~~~~~~~~---~-~~~~~~~~~~~~~   74 (359)
                      +.+....+.+.+..+...++.|..+.   +.++++.+..+-.-++.+.++ |+.........   . ...+... .....
T Consensus       162 ~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~-~~~~~  240 (316)
T KOG1441|consen  162 LFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTF-LILLL  240 (316)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhh-HHHHH
Confidence            56788889999999999999999873   459999999999888888888 87655433221   1 1233333 33344


Q ss_pred             HHHHHHHHHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHH
Q 018256           75 LGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVT  146 (359)
Q Consensus        75 ~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~  146 (359)
                      .+++....|...|..+.++++-.-++....--+++...++++++|++|      ..+.+|..+++.|+++-.
T Consensus       241 ~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt------~~n~~G~~iai~Gv~~Y~  306 (316)
T KOG1441|consen  241 NSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVT------FLNALGYAIAILGVFLYS  306 (316)
T ss_pred             HHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCc------hhhHHHHHHHHHHHHHHH
Confidence            446668889999999999999999999888888888899999999999      559999999999998863

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=96.97  E-value=0.0022  Score=50.50  Aligned_cols=66  Identities=20%  Similarity=0.284  Sum_probs=57.3

Q ss_pred             HHHH-HHHHHHHHHHhccCCcchhhhhh-ccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHh
Q 018256           76 GLLS-CCGQMFHYFGIENGSPALASAMI-DLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTL  147 (359)
Q Consensus        76 g~~~-~~~~~~~~~al~~~~~~~a~~l~-~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~  147 (359)
                      .+.. ++++.++..++++.|.+.+-.+- ...-+.+.+++++++||+++++      +++|+.+.++|++.+-.
T Consensus        36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~------~~~gi~lIi~GVi~l~l  103 (120)
T PRK10452         36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLM------KIAGLTTLVAGIVLIKS  103 (120)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHhhc
Confidence            3444 88999999999999999987775 6888899999999999999955      99999999999988843

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=96.90  E-value=0.012  Score=45.65  Aligned_cols=66  Identities=15%  Similarity=0.217  Sum_probs=56.7

Q ss_pred             HHHHH-HHHHHHHHHHhccCCcchhhhh-hccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHH
Q 018256           75 LGLLS-CCGQMFHYFGIENGSPALASAM-IDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVT  146 (359)
Q Consensus        75 ~g~~~-~~~~~~~~~al~~~~~~~a~~l-~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~  146 (359)
                      ..+.+ .+.+.++..++++.|.+.+-.+ ....-+.+.+.+++++||++|      +.+++|+.+.++|++.+-
T Consensus        35 ~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~------~~~~~gi~lIi~GVi~l~  102 (110)
T PRK09541         35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLD------LPAIIGMMLICAGVLVIN  102 (110)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCC------HHHHHHHHHHHHHHHHHh
Confidence            34445 8888899999999999998776 457788889999999999999      459999999999999983

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=96.77  E-value=0.45  Score=44.08  Aligned_cols=300  Identities=16%  Similarity=0.108  Sum_probs=164.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhc-cCC---CCCCCHHHHHHHHHHHHH
Q 018256            3 ASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYR-KRT---PPQLTWSIVCRIFLLGLL   78 (359)
Q Consensus         3 ~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~-~~~---~~~~~~~~~~~~~~~g~~   78 (359)
                      ..+++...+.+++-|..++-.|. .. +.+ ++..+.-..+-..++.|+...... +..   ....+...+....+.|++
T Consensus         6 i~Gii~h~iGg~~~~sfy~P~kk-vk-~Ws-WEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~l   82 (344)
T PF06379_consen    6 ILGIIFHAIGGFASGSFYVPFKK-VK-GWS-WESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFGVL   82 (344)
T ss_pred             HHHHHHHHHHHHHhhhhccchhh-cC-Ccc-HHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHHH
Confidence            35677888888999999988887 33 333 333332233333344454422211 000   022344566777888988


Q ss_pred             HHHHHHHHHHHhccCCcchhhhhh-ccchHHHHHHHHHHhhccc-cceeccccccchhHHHHHhHHHHHHhhcCCCCCCC
Q 018256           79 SCCGQMFHYFGIENGSPALASAMI-DLTPGFTFILAIIFRMEKL-ELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSA  156 (359)
Q Consensus        79 ~~~~~~~~~~al~~~~~~~a~~l~-~~~Pi~~~lls~l~~~E~~-~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~  156 (359)
                      -..+...|=.+++|...+....+. .+.-.+-.++-.++.++-- -..+..+..-++|++++++|+.+..........  
T Consensus        83 WGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke~--  160 (344)
T PF06379_consen   83 WGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMKEK--  160 (344)
T ss_pred             HhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhhhh--
Confidence            899999999999999999865544 4555555555555544210 011223456899999999999998432211100  


Q ss_pred             CCcccchhhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHH-------HHhhCCCchH----HHHHHHHHHHHHHHHHHH
Q 018256          157 PSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAW-------IVRDYPAELM----VTLICSIFVTILSSAVSL  225 (359)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~vl~k~-------~~~~~~~~~~----~~~~~~~~~~~~~~~~~~  225 (359)
                             +......+.+...|.+.++.+++.-|..++-...       ..+...++..    .....+.-+.+.-...++
T Consensus       161 -------~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~GGf~tN~~yc~  233 (344)
T PF06379_consen  161 -------ELGEEAKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVVLWGGFITNLIYCL  233 (344)
T ss_pred             -------hhccchhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhhhhhHHHHHHHHHH
Confidence                   0001123456788999999999888888764421       1111111221    112223333344444443


Q ss_pred             Hh--c-CCCC---cccc-cCc-hh-HHHHHHHHHHHHHHHHHHHHHHHhcCCcc----eeeeccchhhHHHHHHHHHHhc
Q 018256          226 VA--E-KNPN---AWRL-RPD-IE-LMAIGYSAIFAVSVRSVFHTWALRKKGPV----YVSMFKPLGMVVALVFGIAFLG  292 (359)
Q Consensus       226 ~~--~-~~~~---~~~~-~~~-~~-~~~~~~~g~~~~~~~~~~~~~~l~~~~~~----~~s~~~~l~pi~~~i~~~~~~g  292 (359)
                      ..  . .+.+   +... .+. .. ....+..|+ -=...+++|-++-.+.+..    --.+.+.+..+++-++|.+ ++
T Consensus       234 ~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~-lWy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~snvwGl~-lk  311 (344)
T PF06379_consen  234 ILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGV-LWYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFSNVWGLI-LK  311 (344)
T ss_pred             HHHhhcCCCccccccccccchhHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHHHH-HH
Confidence            22  1 1221   1111 110 11 112222232 2345566666776666644    2334566677777777876 66


Q ss_pred             Cc------cchhhHHHHHHHHHHHHHHHhc
Q 018256          293 DT------LYLGSFVGAATIALGFYAVIWG  316 (359)
Q Consensus       293 e~------~~~~~~iG~~lii~gi~l~~~~  316 (359)
                      |.      .-..-++|.++++.+++++-++
T Consensus       312 EWKg~s~kt~~vl~~G~~vlI~s~~ivG~G  341 (344)
T PF06379_consen  312 EWKGASKKTIRVLVLGIAVLILSVVIVGYG  341 (344)
T ss_pred             HhccCCcccHHHHHHHHHHHHHHHHHHhcc
Confidence            62      2244578999988888877654

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=96.75  E-value=0.0037  Score=55.97  Aligned_cols=77  Identities=12%  Similarity=0.209  Sum_probs=65.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcCccc
Q 018256          243 MAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQAKE  320 (359)
Q Consensus       243 ~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~~~~  320 (359)
                      +....-++ ...+.-.+.+.++++.+|+...++..+..+++.++++++++.+++..||++..+..+|+.+........
T Consensus        18 ~~~~vPA~-lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~   94 (244)
T PF04142_consen   18 LKLAVPAL-LYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS   94 (244)
T ss_pred             HHHHHHHH-HHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence            33444444 355666778899999999999999999999999999999999999999999999999999988766554

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=96.59  E-value=0.016  Score=44.20  Aligned_cols=64  Identities=14%  Similarity=0.169  Sum_probs=55.0

Q ss_pred             HHHH-HHHHHHHHHHhccCCcchhhhh-hccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHH
Q 018256           76 GLLS-CCGQMFHYFGIENGSPALASAM-IDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV  145 (359)
Q Consensus        76 g~~~-~~~~~~~~~al~~~~~~~a~~l-~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll  145 (359)
                      .+++ ..++.+...+++++|.+.+=.+ ...--+.+.+.+++++||+++      ..+++|+.+.++|++.+
T Consensus        36 ~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~------~~~~~gl~LiiaGvi~L  101 (106)
T COG2076          36 TIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLS------LIKLLGLALILAGVIGL  101 (106)
T ss_pred             HHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCC------HHHHHHHHHHHHHHHHh
Confidence            3344 8889999999999999987554 467778899999999999999      45999999999999887

>PRK11431 multidrug efflux system protein; Provisional

Probab=96.55  E-value=0.009  Score=45.89  Aligned_cols=61  Identities=13%  Similarity=0.102  Sum_probs=53.8

Q ss_pred             HHHHHHHHHHHhccCCcchhhhhh-ccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHH
Q 018256           79 SCCGQMFHYFGIENGSPALASAMI-DLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV  145 (359)
Q Consensus        79 ~~~~~~~~~~al~~~~~~~a~~l~-~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll  145 (359)
                      ...++.+...+++.+|.+.+=.+- ..--+.+.+.+++++||++++      .+++|+.+.++|++.+
T Consensus        39 ~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~------~~~~gi~lIi~GVv~l  100 (105)
T PRK11431         39 MIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASP------ARLLSLALIVAGIIGL  100 (105)
T ss_pred             HHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCH------HHHHHHHHHHHHHHhh
Confidence            388899999999999999876554 577888999999999999995      4999999999999887

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=96.44  E-value=0.0012  Score=57.65  Aligned_cols=134  Identities=12%  Similarity=0.014  Sum_probs=90.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHH
Q 018256          176 IGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSV  255 (359)
Q Consensus       176 ~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  255 (359)
                      .+.+.+++=++.|+..-....|...   .|...+.-..+-+.+..+++.++..+... +.     .+..-+..|. .=.+
T Consensus         2 ~~~liaL~P~l~WGsip~v~~k~GG---~p~qQ~lGtT~GALifaiiv~~~~~p~~T-~~-----~~iv~~isG~-~Ws~   71 (288)
T COG4975           2 MDLLIALLPALGWGSIPLVANKFGG---KPYQQTLGTTLGALIFAIIVFLFVSPELT-LT-----IFIVGFISGA-FWSF   71 (288)
T ss_pred             hhHHHHHHHHHHhcccceeeeecCC---ChhHhhhhccHHHHHHHHHHheeecCccc-hh-----hHHHHHHhhh-Hhhh
Confidence            3567888888999987666554422   25555655666666666666554322211 11     1222223333 3457


Q ss_pred             HHHHHHHHHhcCCcceeeec-cchhhHHHHHHHHHHhcCccchhhH----HHHHHHHHHHHHHHhcCcc
Q 018256          256 RSVFHTWALRKKGPVYVSMF-KPLGMVVALVFGIAFLGDTLYLGSF----VGAATIALGFYAVIWGQAK  319 (359)
Q Consensus       256 ~~~~~~~~l~~~~~~~~s~~-~~l~pi~~~i~~~~~~ge~~~~~~~----iG~~lii~gi~l~~~~~~~  319 (359)
                      ++..+.++.+..+.+++..+ +.++.+-+-+++++.+||..+..++    +..++++.|+++..+.++.
T Consensus        72 GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~  140 (288)
T COG4975          72 GQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRN  140 (288)
T ss_pred             hhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccc
Confidence            88889999999999999988 5678888899999999999887764    4457788888888776553

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=96.37  E-value=0.031  Score=50.02  Aligned_cols=179  Identities=12%  Similarity=0.034  Sum_probs=111.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 018256            5 VTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQM   84 (359)
Q Consensus         5 ~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   84 (359)
                      ++++.+.+++++|.+++-.|. .+ .-|++.+-++......+.-+.+..+...    |++.    .+..+.|.+.+.++.
T Consensus         1 G~~a~~va~~~fGs~~vPvK~-~~-~gDg~~fQw~~~~~i~~~g~~v~~~~~~----p~f~----p~amlgG~lW~~gN~   70 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKK-FD-TGDGFFFQWVMCSGIFLVGLVVNLILGF----PPFY----PWAMLGGALWATGNI   70 (254)
T ss_pred             CchhHHHHHHHhcccceeeEe-cc-CCCcHHHHHHHHHHHHHHHHHHHHhcCC----Ccce----eHHHhhhhhhhcCce
Confidence            467889999999999999998 55 4688777777665544444433333221    3332    456677788899999


Q ss_pred             HHHHHhccCCcchhhhhhccchHHHH-HHHHH-Hhh---ccccceeccccccchhHHHHHhHHHHHHhhcCCCCCC-C--
Q 018256           85 FHYFGIENGSPALASAMIDLTPGFTF-ILAII-FRM---EKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITS-A--  156 (359)
Q Consensus        85 ~~~~al~~~~~~~a~~l~~~~Pi~~~-lls~l-~~~---E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~-~--  156 (359)
                      +..-.++..+.+...++-++.-..+- ..+.+ +++   |.++.    .....+|++++++|..+..+-+.+.-.. .  
T Consensus        71 ~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~----~~Ln~~G~~l~~~~~~~f~fik~~~~~~~~~~  146 (254)
T PF07857_consen   71 LVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSS----PWLNYIGVALVLVSGIIFSFIKSEEKEPKKSS  146 (254)
T ss_pred             eehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccch----hHHHHHHHHHHHHHHHheeeecCCCCCccccc
Confidence            99999999999999888876544443 33333 333   33332    2678899999999988875543222000 0  


Q ss_pred             -----C-Ccccchhh------hccC-----CCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 018256          157 -----P-SKNKLINE------LVQL-----PLSNWTIGGIFLAAHSVILAIYYIVQAW  197 (359)
Q Consensus       157 -----~-~~~~~~~~------~~~~-----~~~~~~~G~~~~l~a~~~~a~~~vl~k~  197 (359)
                           . ++.+...+      ..+.     ...+...|..+++.+++.|+...+=...
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~S~vd~l~~~~~RivG~~LAv~aGvlyGs~fvPv~Y  204 (254)
T PF07857_consen  147 EETPLSIEDVIEIEDDSENSEDSSWVDELSPRKKRIVGIILAVFAGVLYGSNFVPVIY  204 (254)
T ss_pred             cccccccccccccccccccccccccccccccccchhHhHHHHHHHHHHHhcccchHHH
Confidence                 0 00000000      0010     1124678888888888888886543333

The region concerned is approximately 280 residues long.

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=96.13  E-value=0.015  Score=45.10  Aligned_cols=109  Identities=14%  Similarity=0.068  Sum_probs=74.0

Q ss_pred             HHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHHHHHHHH
Q 018256          183 AHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSVRSVFHTW  262 (359)
Q Consensus       183 ~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  262 (359)
                      +-++.|+..+.+.||..+..+ +..-.. +.. .-...    ++         .    .|-+.+  .+...-.+-.+|++
T Consensus         3 ~Vg~~WG~Tnpfik~g~~~~~-~~~~~~-~~~-~~~~~----Ll---------~----n~~y~i--pf~lNq~GSv~f~~   60 (113)
T PF10639_consen    3 LVGILWGCTNPFIKRGSSGLE-KVKASL-QLL-QEIKF----LL---------L----NPKYII--PFLLNQSGSVLFFL   60 (113)
T ss_pred             eehHHhcCchHHHHHHHhhcC-CccchH-HHH-HHHHH----HH---------H----hHHHHH--HHHHHHHHHHHHHH
Confidence            346789999999998877655 222221 111 11111    10         0    022222  22234456677788


Q ss_pred             HHhcCCcceeeec-cchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHH
Q 018256          263 ALRKKGPVYVSMF-KPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAV  313 (359)
Q Consensus       263 ~l~~~~~~~~s~~-~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~  313 (359)
                      .+++.+.+.+.++ +.+.-+++++.++++.+|..+...++|+++|++|+.+.
T Consensus        61 ~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   61 LLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            8999999999998 59999999999998888888899999999999998653

Many members are annotated as potential transmembrane proteins.

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=95.70  E-value=0.081  Score=39.74  Aligned_cols=52  Identities=21%  Similarity=0.152  Sum_probs=32.0

Q ss_pred             HHHHHHHHHHhccCCcchhhhhh-ccchHHHHHHHHHHhhccccceeccccccchhHHH
Q 018256           80 CCGQMFHYFGIENGSPALASAMI-DLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVL  137 (359)
Q Consensus        80 ~~~~~~~~~al~~~~~~~a~~l~-~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l  137 (359)
                      +.+..++..++++.|.+.+-.+. .+..+.+.+.+.+++||++|++      |++|+.+
T Consensus        40 ~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~------~~~gi~l   92 (93)
T PF00893_consen   40 GLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLS------KWLGIGL   92 (93)
T ss_dssp             HHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------------HHHHHH
T ss_pred             HHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHhheee
Confidence            88889999999999999986654 6888999999999999999955      8888765

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>TIGR00803 nst UDP-galactose transporter

Probab=95.55  E-value=0.043  Score=48.26  Aligned_cols=66  Identities=14%  Similarity=0.193  Sum_probs=57.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHH
Q 018256           72 IFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGAL  143 (359)
Q Consensus        72 ~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~  143 (359)
                      .+...+..+.+..+..+.+++.++..-+....+.++++.+++.++++|+++      ..+++|+.+.+.|+.
T Consensus       155 ~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls------~~~~~g~~lV~~~~~  220 (222)
T TIGR00803       155 VWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKIS------STFYLGAILVFLATF  220 (222)
T ss_pred             HHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcc------HHHHHHHHHHHeeeE
Confidence            334445557888889999999999999999999999999999999999999      459999999888864

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.47  E-value=0.21  Score=40.79  Aligned_cols=133  Identities=13%  Similarity=0.017  Sum_probs=86.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCC-hHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHH
Q 018256            5 VTAAMVTLEFLDVGLNTVTKAAMSRGAS-HFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQ   83 (359)
Q Consensus         5 ~~~~~l~~~~~~g~~~~~~k~~~~~~~~-p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   83 (359)
                      .++..+.+..+-.....++-. +.+..+ |....+.-+..+.+++..+.+...+... .....+.-++.+.-|++++...
T Consensus         6 ~ll~~i~aG~~l~~Q~~iN~q-L~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~-~a~~~~~pwW~~~GG~lGa~~v   83 (150)
T COG3238           6 YLLFAILAGALLPLQAAINGR-LARYLGSPLLASLISFLVGTVLLLILLLIKQGHPG-LAAVASAPWWAWIGGLLGAIFV   83 (150)
T ss_pred             HHHHHHHHhhhhhhHHHHHHH-HHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCc-hhhccCCchHHHHccchhhhhh
Confidence            345555666666666666666 333444 9999999999988888777666333222 2222344466677788888888


Q ss_pred             HHHHHHhccCCcchhhhhhc-cchHHHHHHHHHH-h---hccccceeccccccchhHHHHHhHHHHH
Q 018256           84 MFHYFGIENGSPALASAMID-LTPGFTFILAIIF-R---MEKLELRVQSSQAKSFGTVLLIGGALIV  145 (359)
Q Consensus        84 ~~~~~al~~~~~~~a~~l~~-~~Pi~~~lls~l~-~---~E~~~~~~~~~~~~~~g~~l~~~Gv~ll  145 (359)
                      ...........++....+.- -+-+...++..+= +   +.+++      ..+++|+++.++|++++
T Consensus        84 t~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~------~~r~lgi~L~l~gil~~  144 (150)
T COG3238          84 TSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLN------LPRILGILLVLAGILLA  144 (150)
T ss_pred             hhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCC------HHHHHHHHHHHHHHHHh
Confidence            88888888888877666553 4444445554221 2   24444      66999999999995554

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=95.46  E-value=0.8  Score=42.56  Aligned_cols=142  Identities=10%  Similarity=0.074  Sum_probs=94.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhCC---CchHHHHHHHHHHHHHHHHHHHHhcCC--------CCcccccCchhHHHH
Q 018256          177 GGIFLAAHSVILAIYYIVQAWIVRDYP---AELMVTLICSIFVTILSSAVSLVAEKN--------PNAWRLRPDIELMAI  245 (359)
Q Consensus       177 G~~~~l~a~~~~a~~~vl~k~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~  245 (359)
                      =.+.++...+-++......|...+..+   .+.+..+..-++-.+++....+..+..        ...+......+...+
T Consensus        16 k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~   95 (345)
T KOG2234|consen   16 KYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKV   95 (345)
T ss_pred             HHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHH
Confidence            334445555566666666665544321   256667777777777777776644311        111111111122222


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcCcc
Q 018256          246 GYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQAK  319 (359)
Q Consensus       246 ~~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~~~  319 (359)
                      ..-++ ...+--.+++.++.+.+|++..+...+....+.++..++++++++..||...++..+|+.++......
T Consensus        96 ~vPa~-iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~  168 (345)
T KOG2234|consen   96 SVPAL-IYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLS  168 (345)
T ss_pred             HHHHH-HHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCC
Confidence            22222 23344457789999999999999999999999999999999999999999999999999999944433

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=95.30  E-value=0.27  Score=44.56  Aligned_cols=138  Identities=15%  Similarity=0.208  Sum_probs=106.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHHHHHHHHHHhhccCCCC-----CCCHHHHHHHHHHH
Q 018256            3 ASVTAAMVTLEFLDVGLNTVTKAAMSR-GASHFILVVYSNTLAIFLLVPSSFIFYRKRTPP-----QLTWSIVCRIFLLG   76 (359)
Q Consensus         3 ~~~~~~~l~~~~~~g~~~~~~k~~~~~-~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~-----~~~~~~~~~~~~~g   76 (359)
                      ..+++++..--++-|+.....+..+.. .++++.+.++-++..++.-... ++.....+ +     +..++.++..++.+
T Consensus       171 ~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~-li~qg~~~-~av~F~~~hp~~~~Di~l~s  248 (327)
T KOG1581|consen  171 PIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTY-LILQGHLL-PAVSFIKEHPDVAFDILLYS  248 (327)
T ss_pred             hHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHh-hhcCCCCc-hHHHHHHcChhHHHHHHHHH
Confidence            456777777778888888877765542 5889999999998888776543 22222111 1     22456678888999


Q ss_pred             HHHHHHHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhh
Q 018256           77 LLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLY  148 (359)
Q Consensus        77 ~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~  148 (359)
                      .+++.++.+-|.-++.-++-.-+.+..+--++.++++.+.++.+++      +.+|.|+.+.+.|..+=...
T Consensus       249 ~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s------~~q~~g~~iVFg~i~l~~~~  314 (327)
T KOG1581|consen  249 TCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLS------SEQWLGVLIVFGGIFLEILL  314 (327)
T ss_pred             HhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccc------hhhccCeeeehHHHHHHHHH
Confidence            9998889888888888887777888889999999999999999999      55999999999998776443

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=94.87  E-value=0.14  Score=45.77  Aligned_cols=127  Identities=9%  Similarity=0.129  Sum_probs=68.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHhcCCC-CcccccCchh-----HHHHHHHHH
Q 018256          177 GGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNP-NAWRLRPDIE-----LMAIGYSAI  250 (359)
Q Consensus       177 G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-----~~~~~~~g~  250 (359)
                      |.+.++.|+++|+...+=.||.... | ++....++.....+...++.+..+.+. ..|......-     ...+-.+-.
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~~~g-D-g~~fQw~~~~~i~~~g~~v~~~~~~p~f~p~amlgG~lW~~gN~~~vpii~~   78 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKFDTG-D-GFFFQWVMCSGIFLVGLVVNLILGFPPFYPWAMLGGALWATGNILVVPIIKT   78 (254)
T ss_pred             CchhHHHHHHHhcccceeeEeccCC-C-cHHHHHHHHHHHHHHHHHHHHhcCCCcceeHHHhhhhhhhcCceeehhHhhh
Confidence            4567888999999988888877543 3 676666666666666666665444321 1221110000     001111111


Q ss_pred             HHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHH-HhcCc-----cchhhHHHHHHHHHHHHHHHhcCccc
Q 018256          251 FAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIA-FLGDT-----LYLGSFVGAATIALGFYAVIWGQAKE  320 (359)
Q Consensus       251 ~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~-~~ge~-----~~~~~~iG~~lii~gi~l~~~~~~~~  320 (359)
                      ++-++++.+|.               ....+.+-..+.+ ++|+.     -++..++|.+++++|..+...-|.++
T Consensus        79 iGLglg~liW~---------------s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~  139 (254)
T PF07857_consen   79 IGLGLGMLIWG---------------SVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEE  139 (254)
T ss_pred             hhhHHHHHHHH---------------HHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence            23344444443               1233333333332 34432     23567899999999998888765554

The region concerned is approximately 280 residues long.

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=94.70  E-value=0.26  Score=43.04  Aligned_cols=136  Identities=18%  Similarity=0.165  Sum_probs=91.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHH-hCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCC---CCCCHHHHHHHHHHHHHHH
Q 018256            5 VTAAMVTLEFLDVGLNTVTKAAM-SRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTP---PQLTWSIVCRIFLLGLLSC   80 (359)
Q Consensus         5 ~~~~~l~~~~~~g~~~~~~k~~~-~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~   80 (359)
                      +-+++++.-.+-|......-..- +..-+...+.++-++-+.+.+..-.++...-+..   ..-.+..++.+...++.++
T Consensus       173 GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai~s~  252 (337)
T KOG1580|consen  173 GELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAIASC  252 (337)
T ss_pred             HHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence            34556666666666665544321 1123444555555555555543322221110000   0011345677788899999


Q ss_pred             HHHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHH
Q 018256           81 CGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVT  146 (359)
Q Consensus        81 ~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~  146 (359)
                      +++.+.|.-+.+-++-.-+++..+--+|+++.+.++++.+++.|      ||+|..+.+.|...=.
T Consensus       253 LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~r------QwlgtvlVF~aL~~D~  312 (337)
T KOG1580|consen  253 LGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGR------QWLGTVLVFSALTADV  312 (337)
T ss_pred             hhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHH------HHHHHHHHHHHhhhHh
Confidence            99999999999999999999999999999999999999999955      9999999999876643

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=94.49  E-value=0.38  Score=44.01  Aligned_cols=138  Identities=13%  Similarity=0.103  Sum_probs=102.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHh-CCCChHHHHHHHHHHHHHHHHHHHHHhhcc-----CCCCCCCHHHHHHHHHHHH
Q 018256            4 SVTAAMVTLEFLDVGLNTVTKAAMS-RGASHFILVVYSNTLAIFLLVPSSFIFYRK-----RTPPQLTWSIVCRIFLLGL   77 (359)
Q Consensus         4 ~~~~~~l~~~~~~g~~~~~~k~~~~-~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~   77 (359)
                      .++..++...+.-+...+..|+..+ .+.+.+.++++..+.+...+....++....     ......+...+....+.++
T Consensus       157 ~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv  236 (314)
T KOG1444|consen  157 RGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCV  236 (314)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHH
Confidence            3566677777777777788887654 367888899999999888876655444321     1101123445566777888


Q ss_pred             HHHHHHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHh
Q 018256           78 LSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTL  147 (359)
Q Consensus        78 ~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~  147 (359)
                      ++..-+++.+++.+..++...++.....-+.+.+...++.+++++      +...+|+.+++.|.++-..
T Consensus       237 ~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~------~~n~~gll~~~~ggv~Y~~  300 (314)
T KOG1444|consen  237 MGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFT------FLNVIGLLVGFFGGVLYSY  300 (314)
T ss_pred             HHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceec------hhhhHHHHHHhhhhhHHhh
Confidence            889999999999999999999888855556666666777888898      6699999999999888643

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=93.93  E-value=0.018  Score=48.62  Aligned_cols=66  Identities=15%  Similarity=0.169  Sum_probs=59.5

Q ss_pred             HHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcCcccc
Q 018256          256 RSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQAKEE  321 (359)
Q Consensus       256 ~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~~~~~  321 (359)
                      +-+.|..++++++|+.++.+..-.-.+..+++++++||++...+++..++-+.|+++..+.++..+
T Consensus        66 aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~a  131 (290)
T KOG4314|consen   66 ANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEHA  131 (290)
T ss_pred             CCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchhh
Confidence            356788999999999999999999999999999999999999999999999999998887765543

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=93.23  E-value=0.022  Score=51.89  Aligned_cols=130  Identities=15%  Similarity=0.207  Sum_probs=91.6

Q ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHH
Q 018256          171 LSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAI  250 (359)
Q Consensus       171 ~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  250 (359)
                      ..++..|.++++.+.+..+...++.||..++.. .   .              ..-.+++......+  ..|+    .|+
T Consensus        16 ~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~-~---~--------------~~ra~~gg~~yl~~--~~Ww----~G~   71 (335)
T KOG2922|consen   16 SSDNIIGLVLAISSSIFIGSSFILKKKGLKRAG-A---S--------------GLRAGEGGYGYLKE--PLWW----AGM   71 (335)
T ss_pred             ccCceeeeeehhhccEEEeeehhhhHHHHHHHh-h---h--------------cccccCCCcchhhh--HHHH----HHH
Confidence            345568999999999999999999988766643 1   0              00011111111111  1122    233


Q ss_pred             HHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcCccccccc
Q 018256          251 FAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQAKEEKMD  324 (359)
Q Consensus       251 ~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~~~~~~~~  324 (359)
                      +...++-...+.+....+++.++.+..++.+...+++..+++|+++....+|+++.++|-.+.+...+++.+..
T Consensus        72 ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~  145 (335)
T KOG2922|consen   72 LTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEIE  145 (335)
T ss_pred             HHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccccc
Confidence            34445555566666677999999999999999999999999999999999999999999888887665554443

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=92.57  E-value=0.61  Score=40.47  Aligned_cols=113  Identities=18%  Similarity=0.160  Sum_probs=91.2

Q ss_pred             CCChHHHHHHHHHHHHHHHHHHHHHhhccCCC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhhhccch
Q 018256           30 GASHFILVVYSNTLAIFLLVPSSFIFYRKRTP---PQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTP  106 (359)
Q Consensus        30 ~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~P  106 (359)
                      ....+..++|.++++..++..+-++...+...   ..++.....+.++.|++...-.++.-|.++-++.+.-+.+..+.-
T Consensus       182 Nf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgiSy~saWcvrVtSSTtySMvGALNK  261 (309)
T COG5070         182 NFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNK  261 (309)
T ss_pred             ccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhh
Confidence            46678889999999999988776665543321   235556667888899999888889999999999999999998888


Q ss_pred             HHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhh
Q 018256          107 GFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLY  148 (359)
Q Consensus       107 i~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~  148 (359)
                      .-..+.+.++++|+.|      ..++..+++++...++-...
T Consensus       262 lp~alaGlvffdap~n------f~si~sillGflsg~iYava  297 (309)
T COG5070         262 LPIALAGLVFFDAPVN------FLSIFSILLGFLSGAIYAVA  297 (309)
T ss_pred             ChHHHhhhhhcCCchh------HHHHHHHHHHHHHHHHHHHH
Confidence            8889999999999999      55999999998877776443

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=90.86  E-value=4.8  Score=36.82  Aligned_cols=136  Identities=16%  Similarity=0.103  Sum_probs=86.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhCC----CChHHHHHHHHHHHHHHHHHHHHHhhccCCC------CCCC----HHHH
Q 018256            4 SVTAAMVTLEFLDVGLNTVTKAAMSRG----ASHFILVVYSNTLAIFLLVPSSFIFYRKRTP------PQLT----WSIV   69 (359)
Q Consensus         4 ~~~~~~l~~~~~~g~~~~~~k~~~~~~----~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~------~~~~----~~~~   69 (359)
                      .+..+.+.++++-|+-+++.+..+.++    -+|......-.-...+.++|..+...+....      ...+    ++..
T Consensus       164 ~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~  243 (349)
T KOG1443|consen  164 EGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVI  243 (349)
T ss_pred             hhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHH
Confidence            467788889999999999999876522    2466666555555555666655554432210      0111    1222


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHH
Q 018256           70 CRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV  145 (359)
Q Consensus        70 ~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll  145 (359)
                      ..+...|.+.++.-.+-|.=++.++.-..++..-..=+-+.+++..+++++++      -..+.|..++..|+..=
T Consensus       244 g~i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls------~lN~~Gl~i~~agi~~~  313 (349)
T KOG1443|consen  244 GLISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLS------LLNWLGLAICLAGILLH  313 (349)
T ss_pred             HHHHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchh------hhHHHHHHHHHHHHHHh
Confidence            22333333333334444444566666555665556667789999999999999      66999999999998764

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=88.69  E-value=2.8  Score=38.98  Aligned_cols=142  Identities=16%  Similarity=0.097  Sum_probs=82.1

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHH-HHhcCCCC-cccccCchhHHHHHHHHH
Q 018256          173 NWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVS-LVAEKNPN-AWRLRPDIELMAIGYSAI  250 (359)
Q Consensus       173 ~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~g~  250 (359)
                      .-..|.++..+++++-+.+++=.||. |+.+ -...=..+.+++-++.-.+. ++.-++.. .....+...+......|+
T Consensus         4 ~ii~Gii~h~iGg~~~~sfy~P~kkv-k~Ws-WEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~   81 (344)
T PF06379_consen    4 AIILGIIFHAIGGFASGSFYVPFKKV-KGWS-WESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFGV   81 (344)
T ss_pred             hHHHHHHHHHHHHHHhhhhccchhhc-CCcc-HHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHH
Confidence            45789999999999999988877766 3433 33344444455554443333 22233322 222222233444444454


Q ss_pred             HHHHHHHHHHHHHHhcCCccee-eeccchhhHHHHHHHHHHhcC-------ccchhhHHHHHHHHHHHHHHHhcC
Q 018256          251 FAVSVRSVFHTWALRKKGPVYV-SMFKPLGMVVALVFGIAFLGD-------TLYLGSFVGAATIALGFYAVIWGQ  317 (359)
Q Consensus       251 ~~~~~~~~~~~~~l~~~~~~~~-s~~~~l~pi~~~i~~~~~~ge-------~~~~~~~iG~~lii~gi~l~~~~~  317 (359)
                       -=+++-..|-.++|+.+.+.. ++..-+.-+++.++--++.|+       +-....++|.++.++|+.+..+.-
T Consensus        82 -lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG  155 (344)
T PF06379_consen   82 -LWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAG  155 (344)
T ss_pred             -HHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHH
Confidence             244556666777888776543 333444444444444444332       223467899999999999998753

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>KOG4831 consensus Unnamed protein [Function unknown]

Probab=88.68  E-value=0.9  Score=34.38  Aligned_cols=60  Identities=18%  Similarity=0.203  Sum_probs=47.8

Q ss_pred             HHHHHHHHHHhcCCcceeeec-cchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHH
Q 018256          255 VRSVFHTWALRKKGPVYVSMF-KPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVI  314 (359)
Q Consensus       255 ~~~~~~~~~l~~~~~~~~s~~-~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~  314 (359)
                      .+-.+|++.+++.+-+.+..+ +.+.-.++.++|..+..|......++|+.+++.|+++..
T Consensus        64 cgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lci  124 (125)
T KOG4831|consen   64 CGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLCI  124 (125)
T ss_pred             hhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhee
Confidence            344566777999998888777 566888999999986666667888999999999998754

>PRK06638 NADH:ubiquinone oxidoreductase subunit J; Provisional

Probab=88.56  E-value=15  Score=31.65  Aligned_cols=34  Identities=15%  Similarity=0.163  Sum_probs=23.5

Q ss_pred             HHHHHHHhcCccchhhHHHHHHHHH--HHHHHHhcC
Q 018256          284 LVFGIAFLGDTLYLGSFVGAATIAL--GFYAVIWGQ  317 (359)
Q Consensus       284 ~i~~~~~~ge~~~~~~~iG~~lii~--gi~l~~~~~  317 (359)
                      -.+|..++++-.-+.+..|.++.++  |.+...+++
T Consensus       133 ~~iG~~L~t~y~l~fe~~silLLvAmIGAI~La~~~  168 (198)
T PRK06638        133 KAIGILLFTDYLLPFELASVLLLVAMVGAIVLARRE  168 (198)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence            4558888888888888888877764  554444433

>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine

Probab=88.47  E-value=0.67  Score=42.14  Aligned_cols=64  Identities=13%  Similarity=0.081  Sum_probs=40.6

Q ss_pred             HHHHHHHHHHHHHhcCCcceeeec-cchhhHHHHHHHHHHhcCccc--hhhHHHHHHHHHHHHHHHhc
Q 018256          252 AVSVRSVFHTWALRKKGPVYVSMF-KPLGMVVALVFGIAFLGDTLY--LGSFVGAATIALGFYAVIWG  316 (359)
Q Consensus       252 ~~~~~~~~~~~~l~~~~~~~~s~~-~~l~pi~~~i~~~~~~ge~~~--~~~~iG~~lii~gi~l~~~~  316 (359)
                      .--++-.+..+++...+.+.+-++ ..+..+.++.+.|+ ++++.+  ..-+.|.+++++++++-...
T Consensus        81 vfnlgNillq~aia~aGmSVafpvg~glalVlGv~~NYf-ld~~~n~a~iLF~GV~cf~iAI~lga~a  147 (336)
T PF07168_consen   81 VFNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYF-LDPKINRAEILFPGVACFLIAIILGAAA  147 (336)
T ss_pred             hhhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeee-ccCCCCCceEEEccHHHHHHHHHHHHHH
Confidence            344566666777777676665555 34445556667775 455554  24567888888888876643

Transport is dependent on glucose and a proton gradient [].

>KOG4831 consensus Unnamed protein [Function unknown]

Probab=88.15  E-value=9.7  Score=28.95  Aligned_cols=112  Identities=21%  Similarity=0.325  Sum_probs=73.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCCh------HHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH
Q 018256            6 TAAMVTLEFLDVGLNTVTKAAMSRGASH------FILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLS   79 (359)
Q Consensus         6 ~~~~l~~~~~~g~~~~~~k~~~~~~~~p------~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   79 (359)
                      ...++...++||...++.|.+-. +.+.      ....++|-....                 ..+|+.+    +-=.++
T Consensus         5 ~~~lvaVgllWG~Tnplirrgs~-g~~~v~~~~~k~~~~lqe~~tl-----------------~l~w~Y~----iPFllN   62 (125)
T KOG4831|consen    5 MDKLVAVGLLWGATNPLIRRGSL-GWDKVKSSSRKIMIALQEMKTL-----------------FLNWEYL----IPFLLN   62 (125)
T ss_pred             HHHHHHHHHHHccccHHHHHHHh-hHhhccCchHHHHHHHHHHHHH-----------------HHhHHHH----HHHHHH
Confidence            45677889999999999998533 3322      222222221111                 1223222    222345


Q ss_pred             HHHHHHHHHHhccCCcchhhhhhc-cchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHH
Q 018256           80 CCGQMFHYFGIENGSPALASAMID-LTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV  145 (359)
Q Consensus        80 ~~~~~~~~~al~~~~~~~a~~l~~-~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll  145 (359)
                      -++..+||+-+++.+.+.+..+.+ +.-.|+++.+..+ +|+..-     +..+.|..+.+.|+.++
T Consensus        63 qcgSaly~~tLa~a~islavpv~nsltfafta~~G~~L-GE~~~g-----~~a~lGt~liv~Gi~Lc  123 (125)
T KOG4831|consen   63 QCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKAL-GEETQG-----GLALLGTSLIVFGIWLC  123 (125)
T ss_pred             HhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHh-cccccc-----ceeehhhhHHhhhhhhe
Confidence            677889999999999999988875 5557777777765 555542     56888999999988765

>PRK02237 hypothetical protein; Provisional

Probab=85.19  E-value=3.3  Score=31.65  Aligned_cols=46  Identities=13%  Similarity=0.181  Sum_probs=40.1

Q ss_pred             eeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcCc
Q 018256          273 SMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQA  318 (359)
Q Consensus       273 s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~~  318 (359)
                      +.+.-.-.+.++++++.+-|++|+...++|..+.++|+.+..+..+
T Consensus        63 AAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~pR  108 (109)
T PRK02237         63 AAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAPR  108 (109)
T ss_pred             HHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecCC
Confidence            4566777888899999999999999999999999999988876654

>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function

Probab=80.31  E-value=1.9  Score=32.83  Aligned_cols=46  Identities=17%  Similarity=0.278  Sum_probs=39.5

Q ss_pred             eeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcCc
Q 018256          273 SMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQA  318 (359)
Q Consensus       273 s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~~  318 (359)
                      +.+.-.-.+.++++++.+-|++|+...++|..+.++|+.+..+.+|
T Consensus        61 AAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~PR  106 (107)
T PF02694_consen   61 AAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAPR  106 (107)
T ss_pred             HHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecCC
Confidence            3456667788899999999999999999999999999998877654

; GO: 0016020 membrane

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=80.21  E-value=2.9  Score=37.65  Aligned_cols=141  Identities=18%  Similarity=0.136  Sum_probs=95.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHHHHHHHHHHhhccCCC---CCC-CHHHHHHHHHHHH
Q 018256            3 ASVTAAMVTLEFLDVGLNTVTKAAMSR-GASHFILVVYSNTLAIFLLVPSSFIFYRKRTP---PQL-TWSIVCRIFLLGL   77 (359)
Q Consensus         3 ~~~~~~~l~~~~~~g~~~~~~k~~~~~-~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~---~~~-~~~~~~~~~~~g~   77 (359)
                      +.+++.-+++++.-+...+-.|..+.. +-..+.+.++.+..+.++++|...+.+.....   |++ +.+-|....+.|+
T Consensus       184 ~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsgl  263 (347)
T KOG1442|consen  184 WIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGL  263 (347)
T ss_pred             hhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHH
Confidence            567888889999999999999975542 22367888999999999999988766543221   223 4455555666777


Q ss_pred             HHHHHHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhc
Q 018256           78 LSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYK  149 (359)
Q Consensus        78 ~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~  149 (359)
                      +++..++-..+=++.++|-.--+-...-...=.+++..+++|.-+      ...|-+-++.++|...-..-+
T Consensus       264 fgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks------~lwwtsn~~vLvgs~~YT~vk  329 (347)
T KOG1442|consen  264 FGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKS------GLWWTSNIVVLVGSLAYTLVK  329 (347)
T ss_pred             HHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhh------hheeeeeEEEEehhHHHHHHH
Confidence            775555555555666655432222222333445677888999998      568888888888887776544

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	359
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	99.16
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.66
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.4
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.32

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=99.16  E-value=3.3e-11  Score=96.29  Aligned_cols=72  Identities=15%  Similarity=0.180  Sum_probs=54.3

Q ss_pred             HHHHHHHHHHHHHHHHHhcCCcceeeec-cchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcCcc
Q 018256          248 SAIFAVSVRSVFHTWALRKKGPVYVSMF-KPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQAK  319 (359)
Q Consensus       248 ~g~~~~~~~~~~~~~~l~~~~~~~~s~~-~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~~~  319 (359)
                      .++++++++|.++.+++++.+++.+..+ ..+.|+++.+++++++||++++.+++|+++|++|+++....+++
T Consensus        35 l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~~~  107 (137)
T 2i68_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLSRS  107 (137)
T ss_dssp             HHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC---
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCCCC
Confidence            4566889999999999999999999998 89999999999999999999999999999999999999876543

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.66  E-value=5e-08  Score=75.06  Aligned_cols=70  Identities=16%  Similarity=0.188  Sum_probs=64.4

Q ss_pred             HHHHHHHHHHHHHHHHHhcCCcceeeec-cchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcC
Q 018256          248 SAIFAVSVRSVFHTWALRKKGPVYVSMF-KPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQ  317 (359)
Q Consensus       248 ~g~~~~~~~~~~~~~~l~~~~~~~~s~~-~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~  317 (359)
                      .++++.++++.++.+++|+.+.+.+..+ ..+.|+++.+++++++||++++.+++|.++|++|+++....+
T Consensus        35 ~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            4555788999999999999999999888 899999999999999999999999999999999999987653

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.40  E-value=8.3e-07  Score=70.68  Aligned_cols=69  Identities=19%  Similarity=0.267  Sum_probs=52.3

Q ss_pred             HHHHHH-HHHHHHHHHHhccCCcchhhhh-hccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhh
Q 018256           74 LLGLLS-CCGQMFHYFGIENGSPALASAM-IDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLY  148 (359)
Q Consensus        74 ~~g~~~-~~~~~~~~~al~~~~~~~a~~l-~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~  148 (359)
                      +.+++. ++++++++.++++.+++.+..+ .++.|+++.++++++++|++++      .+++|+++.++|++++...
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~------~~~~Gi~LIi~GV~ll~~~  104 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDL------PAIIGMMLICAGVLIINLL  104 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------------CHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCH------HHHHHHHHHHHHHHHHhcC
Confidence            455555 8999999999999999999998 7999999999999999999995      4999999999999998653

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.32  E-value=5.7e-06  Score=63.42  Aligned_cols=68  Identities=19%  Similarity=0.265  Sum_probs=61.1

Q ss_pred             HHHHHH-HHHHHHHHHHhccCCcchhhhh-hccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHh
Q 018256           74 LLGLLS-CCGQMFHYFGIENGSPALASAM-IDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTL  147 (359)
Q Consensus        74 ~~g~~~-~~~~~~~~~al~~~~~~~a~~l-~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~  147 (359)
                      +.+++. .+++.++..++++.|.+.+..+ ..+.|+++.+++++++||+++++      +++|+.+.+.|++++..
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~------~~~Gi~lIi~Gv~~l~~  103 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLP------AIIGMMLICAGVLIINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHhc
Confidence            455555 8899999999999999999888 79999999999999999999954      99999999999999843

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00