Citrus Sinensis ID: 018284

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------36
Protein Sequence
MPLQKEPQSNLISVSSGHRENWGESNMAEASPITDTSTDDTEDKNQRFERGQLTAVAASDSSDKSKEKSGDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSSGDQSHSMSGNGAAAFDVEYSRWLEEHNRHIVELRAAVNSHAGDTELRTIVDNVTSHFDEIFRLKGIASKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQQLVGIYNLQQSSQQAEDALSQGMDALQQSLAETLANGSPSPSGTSGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDYFSRLRALSSLWLARPRE
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHcccccccHHHHHHHHHcccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcccHHHcccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEccccccccccccccEEEEHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHccHEHHHHcccccHHHHHHHHHccccHHHHHHHHHHHccHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc
Coil and Loop (DISEMBL)
mplqkepqsnlisvssghrenwgesnmaeaspitdtstddtedknqrfergqltavaasdssdkskeksgdQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGifisssgdqshsmsgngaaAFDVEYSRWLEEHNRHIVELRAAvnshagdteLRTIVDNVTSHFDEIFRLKGIASKADVFHILSGmwktpaercfmwiggfrSSELLKLLVNQLEPLTEQQLVGIYNLQQSSQQAEDALSQGMDALQQSLAETlangspspsgtsgnvANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDYFSRLRALSSLWLARPRE
Flexible Loop (DISEMBL)
mplqkepqsnlisvssghrenwgesnmaeaspitdtstddTEDKNQRfergqltavaasdssdkskeksgdqktlrRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSSGDQSHSMSGNGAAAFDVEYSRWLEEHNRHIVELRAavnshagdtELRTIVDNVTSHFDEIFRLKGIASKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQQLVGIYNLQQSSQQAEDALSQGMDALQQSLAETLangspspsgTSGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDYFSRLRAlsslwlarpre
Low Complexity Region (SEG)
MPLQKEPQSNLISVSSGHRENWGESNMAEASPITDTSTDDTEDKNQRFERGQLTAVAAsdssdkskeksgdQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTqleqelqrarqqGIFIsssgdqshsmsGNGAAAFDVEYSRWLEEHNRHIVELRAAVNSHAGDTELRTIVDNVTSHFDEIFRLKGIASKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQQLVGIYNLQQSSQQAEDALSQGMDALQQSLAETLANgspspsgtsgNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDYFsrlralsslwlarprE
Disordered region (IsUnstruct)
******************************************************************************************************************************************AAFDVEYSRWLEEHNRHIVELRAAVNSHAGDTELRTIVDNVTSHFDEIFRLKGIASKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQQLVGIYNL******************************************YMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDYFSRLRALSSLWL*****
Disordered Region (DISOPRED)
***********************************************************************************************VQQLESSRLK********************************AAAFDVEYSRWLEEHNRHIVEL*************RTIVDNVTSHFDEIFRLKGIASKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQQLVGIYN****************DALQQSLAETLANG******************AMAMGKLGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDYFSRLRALSSLWLAR***
Disordered Region (DISEMBL)
*********************WGESNM*****************NQRFERGQLT*********************RRLAQ*****************QLESSRLKLTQLEQELQRARQQGIFIS***********NGAAAFDVEYSRWLEEHNRHIVELRAAVNSHAGDTELRTIVDNVTSHFDEIFRLKGIASKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQQLVGIYNLQQS**********GMDALQQSLAET**********TSGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDYFSRLRALSSLWLARPRE
Disordered Region (DISPRO)
*********************************************************************GDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSSGDQS**MSGNGAAAFDVEYSRWLEEHNRHIVELRAAVNSHAGDTELRTIVDNVTSHFDEIFRLKGIASKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQQLVGIYNLQQSSQQAEDALSQGMDALQQSLAETLANGSPS***TSGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDYFSRLRALSSLWLA****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MPLQKEPQSNLISVSSGHRENWGESNMAEASPITDTSTDDTEDKNQRFERGQLTAVAASDSSDKSKEKSGDQKTLRRLAQNREAARKSRLRxxxxxxxxxxxxxxxxxxxxxxxxxxxxGIFISSSGDQSHSMSGNGAAAFDVEYSRWLEEHNRHIVELRAAVNSHAGDTELRTIVDNVTSHFDEIFRLKGIASKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQQLVGIYNLQQSSQQAEDALSQGMDALQQSLAETLANGSPSPSGTSGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDYFSRLRALSSLWLARPRE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	358	2.2.26 [Sep-21-2011]
O24160	456	TGACG-sequence-specific D	N/A	no	0.958	0.752	0.812	1e-166
Q41558	476	Transcription factor HBP-	N/A	no	0.988	0.743	0.796	1e-164
P23923	332	Transcription factor HBP-	N/A	no	0.924	0.996	0.807	1e-150
Q39140	330	Transcription factor TGA6	yes	no	0.918	0.996	0.753	1e-137
P43273	330	Transcription factor TGA2	no	no	0.921	1.0	0.759	1e-134
Q39163	330	Transcription factor TGA5	no	no	0.918	0.996	0.714	1e-128
Q9SX27	452	Transcription factor PERI	no	no	0.857	0.679	0.706	1e-119
Q39234	384	Transcription factor TGA3	no	no	0.821	0.765	0.582	1e-92
Q39162	364	Transcription factor TGA4	no	no	0.779	0.766	0.589	3e-91
Q93ZE2	368	Transcription factor TGA7	no	no	0.916	0.891	0.516	4e-89

>sp|O24160|TGA21_TOBAC TGACG-sequence-specific DNA-binding protein TGA-2.1 OS=Nicotiana tabacum GN=TGA21 PE=1 SV=1

 Score =  583 bits (1503), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 286/352 (81%), Positives = 312/352 (88%), Gaps = 9/352 (2%)

Query: 8   QSNLISVSSGHRENWGESNMAEASPITDTSTD-DTEDKNQRFERGQLTAVAASDSSDKSK 66
           QSNL+S S  H ENWGESNMA++   TDTSTD D +DKNQ  E GQ        SSDKSK
Sbjct: 110 QSNLVSASGTHHENWGESNMADSGSRTDTSTDMDGDDKNQLIEAGQ--------SSDKSK 161

Query: 67  EKSGDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSS 126
           EK  DQKTLRRLAQNREAARKSRLRKKAYVQQLE+SRLKL+QLEQ+LQRARQQG +IS+ 
Sbjct: 162 EKVLDQKTLRRLAQNREAARKSRLRKKAYVQQLENSRLKLSQLEQDLQRARQQGKYISNI 221

Query: 127 GDQSHSMSGNGAAAFDVEYSRWLEEHNRHIVELRAAVNSHAGDTELRTIVDNVTSHFDEI 186
            DQS+ +  NG  AFD EYSRWLEEHN+HI ELR AVN+HA D ELR+IV+NVT+HFDE+
Sbjct: 222 ADQSNGVGANGPLAFDAEYSRWLEEHNKHINELRTAVNAHASDPELRSIVNNVTAHFDEV 281

Query: 187 FRLKGIASKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQQLVGIYN 246
           FR+KG A+KADVFH+LSGMWKTPAERCFMWIGGFR SELLKLLVNQLEPLTEQQL GIYN
Sbjct: 282 FRVKGNAAKADVFHVLSGMWKTPAERCFMWIGGFRPSELLKLLVNQLEPLTEQQLAGIYN 341

Query: 247 LQQSSQQAEDALSQGMDALQQSLAETLANGSPSPSGTSGNVANYMGQMAMAMGKLGTLEG 306
           LQQSS QAEDALSQGM+ALQQSLAETLANGSP+P G+SG+VANYMGQMAMAMGKLGTLEG
Sbjct: 342 LQQSSHQAEDALSQGMEALQQSLAETLANGSPAPEGSSGDVANYMGQMAMAMGKLGTLEG 401

Query: 307 FLRQADNLRQQTLQQMHRILTTRQSARALLAINDYFSRLRALSSLWLARPRE 358
           FLRQADNLRQQTLQQMHR+LTTRQSARALLAIN+YFSRLRALSSLWLARPRE
Sbjct: 402 FLRQADNLRQQTLQQMHRVLTTRQSARALLAINEYFSRLRALSSLWLARPRE 453

Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription.
Nicotiana tabacum (taxid: 4097)

>sp|Q41558|HBP1C_WHEAT Transcription factor HBP-1b(c1) (Fragment) OS=Triticum aestivum PE=1 SV=2

 Score =  577 bits (1487), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 285/358 (79%), Positives = 319/358 (89%), Gaps = 4/358 (1%)

Query: 4   QKEPQSNLISVSSGHRENWGESNMAEASPITDTSTD---DTEDKNQRFERGQLTAVAASD 60
           QK  Q NL+++ + + +NWGES+MA+ SP TDTSTD   D +++NQ FE+GQL A  ASD
Sbjct: 120 QKGVQPNLVALRTHNNDNWGESSMADTSPRTDTSTDPDIDIDERNQMFEQGQLAAPTASD 179

Query: 61  SSDKSKEKSGDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQG 120
           SSDKS++K  D K+LRRLAQNREAARKSRLRKKAY+Q LESSRLKLTQLEQELQRARQQG
Sbjct: 180 SSDKSRDKL-DHKSLRRLAQNREAARKSRLRKKAYIQNLESSRLKLTQLEQELQRARQQG 238

Query: 121 IFISSSGDQSHSMSGNGAAAFDVEYSRWLEEHNRHIVELRAAVNSHAGDTELRTIVDNVT 180
           IFISSSGDQS S SGNGA AFD+EY+RWLEEHN+HI ELRAA N+HAGD +LR IVD++ 
Sbjct: 239 IFISSSGDQSQSASGNGAVAFDMEYARWLEEHNKHINELRAAANAHAGDDDLRKIVDSIM 298

Query: 181 SHFDEIFRLKGIASKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQQ 240
           S +DE FRLKG+A+KADVFH+LSGMWKTPAERCFMW+GGFRSSELLKLL  QLEPLTEQQ
Sbjct: 299 SQYDEFFRLKGVAAKADVFHVLSGMWKTPAERCFMWLGGFRSSELLKLLAGQLEPLTEQQ 358

Query: 241 LVGIYNLQQSSQQAEDALSQGMDALQQSLAETLANGSPSPSGTSGNVANYMGQMAMAMGK 300
           L GI NLQQSSQQAEDALSQGM+ALQQSLAETLA+GS  P+G+SGNVA+YMGQMAMAMGK
Sbjct: 359 LTGICNLQQSSQQAEDALSQGMEALQQSLAETLASGSLGPAGSSGNVASYMGQMAMAMGK 418

Query: 301 LGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDYFSRLRALSSLWLARPRE 358
           LGTLE FLRQADNLR QTLQQM RILTTRQSARALLAI+DYFSRLRALSSLWLARPRE
Sbjct: 419 LGTLENFLRQADNLRLQTLQQMQRILTTRQSARALLAISDYFSRLRALSSLWLARPRE 476

Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.

Triticum aestivum (taxid: 4565)

>sp|P23923|HBP1B_WHEAT Transcription factor HBP-1b(c38) OS=Triticum aestivum PE=2 SV=1

 Score =  532 bits (1370), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 269/333 (80%), Positives = 296/333 (88%), Gaps = 2/333 (0%)

Query: 27  MAEASPITDTSTDDTEDKNQRFERGQLTAVAASDSSDKSKEKSGDQKTLRRLAQNREAAR 86
           MAEASP T+TSTDDT D+N   E G       SDSSD+S++K+GDQKT+RRLAQNREAAR
Sbjct: 1   MAEASPRTETSTDDT-DENLMLEPGNAALAVVSDSSDRSRDKNGDQKTMRRLAQNREAAR 59

Query: 87  KSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSSGDQSHSMSGNGAAAFDVEYS 146
           KSRLRKKAYVQQLE+SRLKLTQLEQELQRARQQGIFISSS DQSHSMSGNGA AFD EY+
Sbjct: 60  KSRLRKKAYVQQLENSRLKLTQLEQELQRARQQGIFISSSADQSHSMSGNGALAFDTEYA 119

Query: 147 RWLEEHNRHIVELRAAVNSHAGDTELRTIVDNVTSHFDEIFRLKGIASKADVFHILSGMW 206
           RWLEEHNR + ELRAAVN+HAGDTELR++V+ + SH+DEIF+ KG A+KADVFH+LSGMW
Sbjct: 120 RWLEEHNRQVNELRAAVNAHAGDTELRSVVEKIMSHYDEIFKQKGNAAKADVFHVLSGMW 179

Query: 207 KTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQQLVGIYNLQQSSQQAEDALSQGMDALQ 266
           KTPAERCF+W+GGFR SELLKLL  QLEPLTEQQL GI NLQQSSQQAEDALSQGM+ALQ
Sbjct: 180 KTPAERCFLWLGGFRPSELLKLLSTQLEPLTEQQLSGICNLQQSSQQAEDALSQGMEALQ 239

Query: 267 QSLAETLA-NGSPSPSGTSGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRI 325
           QSLAETLA +   S SG++GNVANYMGQMAMAMGKLGTLE FL QADNLRQQTLQQM RI
Sbjct: 240 QSLAETLAGSIGSSGSGSTGNVANYMGQMAMAMGKLGTLENFLSQADNLRQQTLQQMQRI 299

Query: 326 LTTRQSARALLAINDYFSRLRALSSLWLARPRE 358
           LTTRQSARALL I+DY SRLRALSSLWLARP+E
Sbjct: 300 LTTRQSARALLVISDYSSRLRALSSLWLARPKE 332

Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.

Triticum aestivum (taxid: 4565)

>sp|Q39140|TGA6_ARATH Transcription factor TGA6 OS=Arabidopsis thaliana GN=TGA6 PE=1 SV=2

 Score =  488 bits (1256), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 251/333 (75%), Positives = 292/333 (87%), Gaps = 4/333 (1%)

Query: 27  MAEASPITDTSTD-DTEDKNQRFERGQLTAVAASDSSDKSKEKSGDQKTLRRLAQNREAA 85
           MA+ S  TD STD DT+ ++   +RG + A AASDSSD+SK+K  DQKTLRRLAQNREAA
Sbjct: 1   MADTSSRTDVSTDGDTDHRDLGSDRGHMHA-AASDSSDRSKDKL-DQKTLRRLAQNREAA 58

Query: 86  RKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSSGDQSHSMSGNGAAAFDVEY 145
           RKSRLRKKAYVQQLE+SRLKLTQLEQELQRARQQG+FISSSGDQ+HS  GNGA AFD E+
Sbjct: 59  RKSRLRKKAYVQQLENSRLKLTQLEQELQRARQQGVFISSSGDQAHSTGGNGALAFDAEH 118

Query: 146 SRWLEEHNRHIVELRAAVNSHAGDTELRTIVDNVTSHFDEIFRLKGIASKADVFHILSGM 205
           SRWLEE NR + ELR+A+N+HAGDTELR IVD V +H++E+FR+K  A+K DVFH+LSGM
Sbjct: 119 SRWLEEKNRQMNELRSALNAHAGDTELRIIVDGVMAHYEELFRIKSNAAKNDVFHLLSGM 178

Query: 206 WKTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQQLVGIYNLQQSSQQAEDALSQGMDAL 265
           WKTPAERCF+W+GGFRSSELLKLL NQLEP+TE+Q++GI +LQQ+SQQAEDALSQGM++L
Sbjct: 179 WKTPAERCFLWLGGFRSSELLKLLANQLEPMTERQVMGINSLQQTSQQAEDALSQGMESL 238

Query: 266 QQSLAETLANGSPSPSGTSGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRI 325
           QQSLA+T  +     S +S NVA+YMGQMAMAMG+LGTLEGF+RQADNLR QTLQQM R+
Sbjct: 239 QQSLADT-LSSGTLGSSSSDNVASYMGQMAMAMGQLGTLEGFIRQADNLRLQTLQQMLRV 297

Query: 326 LTTRQSARALLAINDYFSRLRALSSLWLARPRE 358
           LTTRQSARALLAI+DY SRLRALSSLWLARPRE
Sbjct: 298 LTTRQSARALLAIHDYSSRLRALSSLWLARPRE 330

Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters.

Arabidopsis thaliana (taxid: 3702)

>sp|P43273|TGA2_ARATH Transcription factor TGA2 OS=Arabidopsis thaliana GN=TGA2 PE=1 SV=1

 Score =  478 bits (1231), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 252/332 (75%), Positives = 287/332 (86%), Gaps = 2/332 (0%)

Query: 27  MAEASPITDTSTDDTEDKNQRFERGQLTAVAASDSSDKSKEKSGDQKTLRRLAQNREAAR 86
           MA+ SP TD STDD  D       G L   AASDSSD+SK K  DQKTLRRLAQNREAAR
Sbjct: 1   MADTSPRTDVSTDDDTDHPDLGSEGALVNTAASDSSDRSKGKM-DQKTLRRLAQNREAAR 59

Query: 87  KSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSSGDQSHSMSGNGAAAFDVEYS 146
           KSRLRKKAYVQQLE+SRLKLTQLEQELQRARQQG+FIS +GDQ+HS  GNGA AFD E+S
Sbjct: 60  KSRLRKKAYVQQLENSRLKLTQLEQELQRARQQGVFISGTGDQAHSTGGNGALAFDAEHS 119

Query: 147 RWLEEHNRHIVELRAAVNSHAGDTELRTIVDNVTSHFDEIFRLKGIASKADVFHILSGMW 206
           RWLEE N+ + ELR+A+N+HAGD+ELR IVD V +H++E+FR+K  A+K DVFH+LSGMW
Sbjct: 120 RWLEEKNKQMNELRSALNAHAGDSELRIIVDGVMAHYEELFRIKSNAAKNDVFHLLSGMW 179

Query: 207 KTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQQLVGIYNLQQSSQQAEDALSQGMDALQ 266
           KTPAERCF+W+GGFRSSELLKLL NQLEP+TE+QL+GI NLQQ+SQQAEDALSQGM++LQ
Sbjct: 180 KTPAERCFLWLGGFRSSELLKLLANQLEPMTERQLMGINNLQQTSQQAEDALSQGMESLQ 239

Query: 267 QSLAETLANGSPSPSGTSGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRIL 326
           QSLA+T  +     S +SGNVA+YMGQMAMAMGKLGTLEGF+RQADNLR QTLQQM R+L
Sbjct: 240 QSLADT-LSSGTLGSSSSGNVASYMGQMAMAMGKLGTLEGFIRQADNLRLQTLQQMIRVL 298

Query: 327 TTRQSARALLAINDYFSRLRALSSLWLARPRE 358
           TTRQSARALLAI+DYFSRLRALSSLWLARPRE
Sbjct: 299 TTRQSARALLAIHDYFSRLRALSSLWLARPRE 330

Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Required to induce the systemic acquired resistance (SAR) via the regulation of pathogenesis-related genes expression. Binding to the as-1 element of PR-1 promoter is salicylic acid-inducible and mediated by NPR1. Could also bind to the C-boxes (5'-ATGACGTCAT-3') with high affinity.

Arabidopsis thaliana (taxid: 3702)

>sp|Q39163|TGA5_ARATH Transcription factor TGA5 OS=Arabidopsis thaliana GN=TGA5 PE=1 SV=2

 Score =  458 bits (1178), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 238/333 (71%), Positives = 277/333 (83%), Gaps = 4/333 (1%)

Query: 27  MAEASPITDTSTD-DTEDKNQRFERGQLTAVAASDSSDKSKEKSGDQKTLRRLAQNREAA 85
           M + SP T  STD DT+  N  F+ G L   A+  S     +   DQKTLRRLAQNREAA
Sbjct: 1   MGDTSPRTSVSTDGDTDHNNLMFDEGHLGIGASDSSDRSKSKM--DQKTLRRLAQNREAA 58

Query: 86  RKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSSGDQSHSMSGNGAAAFDVEY 145
           RKSRLRKKAYVQQLE+SRLKLTQLEQELQRARQQG+FISSSGDQ+HS +G+GA AFDVEY
Sbjct: 59  RKSRLRKKAYVQQLENSRLKLTQLEQELQRARQQGVFISSSGDQAHSTAGDGAMAFDVEY 118

Query: 146 SRWLEEHNRHIVELRAAVNSHAGDTELRTIVDNVTSHFDEIFRLKGIASKADVFHILSGM 205
            RW E+ NR + EL +A++SHA D+ELR IVD V +H++E++R+KG A+K+DVFH+LSGM
Sbjct: 119 RRWQEDKNRQMKELSSAIDSHATDSELRIIVDGVIAHYEELYRIKGNAAKSDVFHLLSGM 178

Query: 206 WKTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQQLVGIYNLQQSSQQAEDALSQGMDAL 265
           WKTPAERCF+W+GGFRSSELLKL+ +QLEPLTEQQ + I NLQQSSQQAEDALSQGMD L
Sbjct: 179 WKTPAERCFLWLGGFRSSELLKLIASQLEPLTEQQSLDINNLQQSSQQAEDALSQGMDNL 238

Query: 266 QQSLAETLANGSPSPSGTSGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRI 325
           QQSLA+T  +     S +SGNVA+YMGQMAMAMGKLGTLEGF+RQADNLR QT QQM R+
Sbjct: 239 QQSLADT-LSSGTLGSSSSGNVASYMGQMAMAMGKLGTLEGFIRQADNLRLQTYQQMVRL 297

Query: 326 LTTRQSARALLAINDYFSRLRALSSLWLARPRE 358
           LTTRQSARALLA+++Y  RLRALSSLWLARPRE
Sbjct: 298 LTTRQSARALLAVHNYTLRLRALSSLWLARPRE 330

Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SX27|PAN_ARATH Transcription factor PERIANTHIA OS=Arabidopsis thaliana GN=PAN PE=1 SV=1

 Score =  429 bits (1102), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 219/310 (70%), Positives = 259/310 (83%), Gaps = 3/310 (0%)

Query: 51  GQLTAVAASDSSDKSKEKSGDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLE 110
           G    + A++ SD+S  KS DQ+TLRRLAQNREAARKSRLRKKAYVQQLE+SR++L QLE
Sbjct: 144 GHQGMLLATNCSDQSNVKSSDQRTLRRLAQNREAARKSRLRKKAYVQQLENSRIRLAQLE 203

Query: 111 QELQRARQQGIFI--SSSGDQSHSMSGNGAAAFDVEYSRWLEEHNRHIVELRAAVNSHAG 168
           +EL+RARQQG  +    S D +H  +GNG  +F++EY+RW EEH R I +LR+ VNS  G
Sbjct: 204 EELKRARQQGSLVERGVSADHTHLAAGNGVFSFELEYTRWKEEHQRMINDLRSGVNSQLG 263

Query: 169 DTELRTIVDNVTSHFDEIFRLKGIASKADVFHILSGMWKTPAERCFMWIGGFRSSELLKL 228
           D +LR +VD V SH+DEIFRLKGI +K DVFH+LSGMWKTPAER FMW+GGFRSSELLK+
Sbjct: 264 DNDLRVLVDAVMSHYDEIFRLKGIGTKVDVFHMLSGMWKTPAERFFMWLGGFRSSELLKI 323

Query: 229 LVNQLEPLTEQQLVGIYNLQQSSQQAEDALSQGMDALQQSLAETLANGSPSPSGTSGNVA 288
           L N ++PLT+QQL+GI NLQQSSQQAEDALSQGM+ALQQSL ETL++ S  P+ +S NVA
Sbjct: 324 LGNHVDPLTDQQLIGICNLQQSSQQAEDALSQGMEALQQSLLETLSSASMGPN-SSANVA 382

Query: 289 NYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDYFSRLRAL 348
           +YMG MAMAMGKLGTLE FLRQAD LRQQTLQQ+HRILTTRQ+ARA L I+DY SRLRAL
Sbjct: 383 DYMGHMAMAMGKLGTLENFLRQADLLRQQTLQQLHRILTTRQAARAFLVIHDYISRLRAL 442

Query: 349 SSLWLARPRE 358
           SSLWLARPR+
Sbjct: 443 SSLWLARPRD 452

Transcriptional activator involved in the determination of floral organ number. Acts to determine floral organ patterning by establishing floral organ primordia in specific numbers and positions. Plays a role in regulating stem cell fate by directly controlling AG expression. Binds to the 5'-AAGAAT-3' cis-acting element found in AG promoter. Might represent a target for a post-translational modification by GRXC7/ROXY1.

Arabidopsis thaliana (taxid: 3702)

>sp|Q39234|TGA3_ARATH Transcription factor TGA3 OS=Arabidopsis thaliana GN=TGA3 PE=1 SV=1

 Score =  340 bits (872), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 177/304 (58%), Positives = 226/304 (74%), Gaps = 10/304 (3%)

Query: 59  SDSSDKSKEKSGDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQ 118
           S ++D+ +++  D K  RRLAQNREAARKSRLRKKA+VQQLE SRLKL+QLEQEL RARQ
Sbjct: 85  SSNNDQDEDRIND-KMKRRLAQNREAARKSRLRKKAHVQQLEESRLKLSQLEQELVRARQ 143

Query: 119 QGIFISSSGDQSH-SMSGN---GAAAFDVEYSRWLEEHNRHIVELRAAVNSHAGDTELRT 174
           QG+ + +S D S+   +GN   G AAF++EY+ WLEE NR + E+R A+ +H GD EL+ 
Sbjct: 144 QGLCVRNSSDTSYLGPAGNMNSGIAAFEMEYTHWLEEQNRRVSEIRTALQAHIGDIELKM 203

Query: 175 IVDNVTSHFDEIFRLKGIASKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVNQLE 234
           +VD+  +H+  +FR+K  A+KADVF ++SGMW+T  ER F WIGGFR SELL +++  +E
Sbjct: 204 LVDSCLNHYANLFRMKADAAKADVFFLMSGMWRTSTERFFQWIGGFRPSELLNVVMPYVE 263

Query: 235 PLTEQQLVGIYNLQQSSQQAEDALSQGMDALQQSLAETLANGSPSPSGTSGNVANYMGQM 294
           PLT+QQL+ + NLQQSSQQAE+ALSQG+D LQQ L E++A              N+   M
Sbjct: 264 PLTDQQLLEVRNLQQSSQQAEEALSQGLDKLQQGLVESIAIQIKVVESV-----NHGAPM 318

Query: 295 AMAMGKLGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDYFSRLRALSSLWLA 354
           A AM  L  LE F+ QAD+LRQQTLQQM +ILTTRQ+AR LLA+ +YF RLRALSSLW A
Sbjct: 319 ASAMENLQALESFVNQADHLRQQTLQQMSKILTTRQAARGLLALGEYFHRLRALSSLWAA 378

Query: 355 RPRE 358
           RPRE
Sbjct: 379 RPRE 382

Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Required to induce the systemic acquired resistance (SAR) via the regulation of pathogenesis-related genes expression. Binding to the as-1 element of PR-1 promoter is salicylic acid-inducible and mediated by NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters.

Arabidopsis thaliana (taxid: 3702)

>sp|Q39162|TGA4_ARATH Transcription factor TGA4 OS=Arabidopsis thaliana GN=TGA4 PE=1 SV=2

 Score =  335 bits (859), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 171/290 (58%), Positives = 214/290 (73%), Gaps = 11/290 (3%)

Query: 73  KTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSSGD-QSH 131
           K  RRLAQNREAARKSRLRKKAYVQQLE+SRLKL  LEQEL RARQQG ++ +  D  + 
Sbjct: 80  KIQRRLAQNREAARKSRLRKKAYVQQLETSRLKLIHLEQELDRARQQGFYVGNGVDTNAL 139

Query: 132 SMSGN---GAAAFDVEYSRWLEEHNRHIVELRAAVNSHAGDTELRTIVDNVTSHFDEIFR 188
           S S N   G  AF++EY  W+EE NR I ELR  ++    D ELR++V+N   H+ ++FR
Sbjct: 140 SFSDNMSSGIVAFEMEYGHWVEEQNRQICELRTVLHGQVSDIELRSLVENAMKHYFQLFR 199

Query: 189 LKGIASKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQQLVGIYNLQ 248
           +K  A+K DVF+++SGMWKT AER F+WIGGFR SELLK+L+   +PLT+QQL+ + NL+
Sbjct: 200 MKSAAAKIDVFYVMSGMWKTSAERFFLWIGGFRPSELLKVLLPHFDPLTDQQLLDVCNLR 259

Query: 249 QSSQQAEDALSQGMDALQQSLAETLANGSPSPSGTSGNVANYMGQMAMAMGKLGTLEGFL 308
           QS QQAEDALSQGM+ LQ +LAE++A      +G  G   +Y+ QM  AM +L  L  F+
Sbjct: 260 QSCQQAEDALSQGMEKLQHTLAESVA------AGKLGE-GSYIPQMTCAMERLEALVSFV 312

Query: 309 RQADNLRQQTLQQMHRILTTRQSARALLAINDYFSRLRALSSLWLARPRE 358
            QAD+LR +TLQQMHRILTTRQ+AR LLA+ +YF RLRALSS W AR RE
Sbjct: 313 NQADHLRHETLQQMHRILTTRQAARGLLALGEYFQRLRALSSSWAARQRE 362

Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters.

Arabidopsis thaliana (taxid: 3702)

>sp|Q93ZE2|TGA7_ARATH Transcription factor TGA7 OS=Arabidopsis thaliana GN=TGA7 PE=1 SV=1

 Score =  328 bits (841), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 176/341 (51%), Positives = 233/341 (68%), Gaps = 13/341 (3%)

Query: 18  HRENWGESNMAEASPITDTSTDDTEDKNQRFERGQLTAVAASDSSDKSKEKSGDQKTLRR 77
           H  N   S++ +  P  D   ++ +  N      Q+ A   S + ++  +     K  RR
Sbjct: 39  HSPNTATSSIIQVDPRIDDHNNNIK-INYDSSHNQIEAEQPSSNDNQDDDGRIHDKMKRR 97

Query: 78  LAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSSGDQSHSMSGNG 137
           LAQNREAARKSRLRKKAYVQQLE SRLKL+QLEQEL++ +QQG  +  SG         G
Sbjct: 98  LAQNREAARKSRLRKKAYVQQLEESRLKLSQLEQELEKVKQQG-HLGPSGS-----INTG 151

Query: 138 AAAFDVEYSRWLEEHNRHIVELRAAVNSHAGDTELRTIVDNVTSHFDEIFRLKGIASKAD 197
            A+F++EYS WL+E +R + ELR A+ SH  D EL+ +V++  +H+  +F++K  A+KAD
Sbjct: 152 IASFEMEYSHWLQEQSRRVSELRTALQSHISDIELKMLVESCLNHYANLFQMKSDAAKAD 211

Query: 198 VFHILSGMWKTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQQLVGIYNLQQSSQQAEDA 257
           VF+++SGMW+T  ER F WIGGFR SELL +++  L+PLT+QQ++ + NLQQSSQQAEDA
Sbjct: 212 VFYLISGMWRTSTERFFQWIGGFRPSELLNVVMPYLQPLTDQQILEVRNLQQSSQQAEDA 271

Query: 258 LSQGMDALQQSLAETLANGSPSPSGTSGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQ 317
           LSQG+D LQQSLAE++   +   S       +Y   MA A+  L  LEGF+ QAD+LRQQ
Sbjct: 272 LSQGIDKLQQSLAESIVIDAVIES------THYPTHMAAAIENLQALEGFVNQADHLRQQ 325

Query: 318 TLQQMHRILTTRQSARALLAINDYFSRLRALSSLWLARPRE 358
           TLQQM +ILTTRQSAR LLA+ +Y  RLRALSSLW ARP+E
Sbjct: 326 TLQQMAKILTTRQSARGLLALGEYLHRLRALSSLWAARPQE 366

Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	358
388522283	461	unknown [Lotus japonicus]	0.966	0.750	0.854	1e-176
224139726	463	predicted protein [Populus trichocarpa]	1.0	0.773	0.891	1e-174
359482245	451	PREDICTED: TGACG-sequence-specific DNA-b	0.994	0.789	0.876	1e-173
449437717	470	PREDICTED: TGACG-sequence-specific DNA-b	1.0	0.761	0.857	1e-172
357509409	452	TGA transcription factor [Medicago trunc	0.969	0.767	0.843	1e-171
357509411	395	TGA transcription factor [Medicago trunc	0.969	0.878	0.843	1e-171
449506021	471	PREDICTED: LOW QUALITY PROTEIN: TGACG-se	1.0	0.760	0.855	1e-170
359487138	469	PREDICTED: transcription factor HBP-1b(c	0.997	0.761	0.846	1e-169
255543929	463	Transcription factor HBP-1b(c1), putativ	0.997	0.771	0.844	1e-167
124361259	332	TGA transcription factor 2 [Populus trem	0.927	1.0	0.918	1e-165

>gi|388522283|gb|AFK49203.1| unknown [Lotus japonicus]

 Score =  623 bits (1606), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 306/358 (85%), Positives = 328/358 (91%), Gaps = 12/358 (3%)

Query: 1   MPLQKEPQSNLISVSSGHRENWGESNMAEASPITDTSTDDTEDKNQRFERGQLTAVAASD 60
           MPLQK+ Q NL S S GHRENWGESN  +ASP   TSTDDT+DKNQ  ERG        +
Sbjct: 116 MPLQKDSQPNLASTSGGHRENWGESNTGDASP---TSTDDTDDKNQMVERG--------E 164

Query: 61  SSDKSKEKSGDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQG 120
           SSD+SK+K+ DQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQG
Sbjct: 165 SSDRSKDKT-DQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQG 223

Query: 121 IFISSSGDQSHSMSGNGAAAFDVEYSRWLEEHNRHIVELRAAVNSHAGDTELRTIVDNVT 180
           IFISS+G+Q+HSMSGNGA AFDVEY+RWLEEHNRH  ELRAA+NSHAGD ELRTIVDN  
Sbjct: 224 IFISSTGEQAHSMSGNGAIAFDVEYARWLEEHNRHTNELRAAINSHAGDIELRTIVDNFM 283

Query: 181 SHFDEIFRLKGIASKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQQ 240
           + FD++FRLKGIA+KADVFHILSGMWKTPAERCFMWIGGFRSSE+LKLLVNQLEPLTEQQ
Sbjct: 284 TQFDDLFRLKGIAAKADVFHILSGMWKTPAERCFMWIGGFRSSEILKLLVNQLEPLTEQQ 343

Query: 241 LVGIYNLQQSSQQAEDALSQGMDALQQSLAETLANGSPSPSGTSGNVANYMGQMAMAMGK 300
           L+GIYNLQQSSQQAEDALSQGMDALQQSL+ETLANGSP+PSG+SGNVANYMGQMAMAMGK
Sbjct: 344 LMGIYNLQQSSQQAEDALSQGMDALQQSLSETLANGSPNPSGSSGNVANYMGQMAMAMGK 403

Query: 301 LGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDYFSRLRALSSLWLARPRE 358
           LGTL GFLRQADNLRQQTLQQM RILTTRQSARALLAI+DYFSRLRALSSLWLARPRE
Sbjct: 404 LGTLAGFLRQADNLRQQTLQQMLRILTTRQSARALLAISDYFSRLRALSSLWLARPRE 461

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224139726|ref|XP_002323247.1| predicted protein [Populus trichocarpa] gi|222867877|gb|EEF05008.1| predicted protein [Populus trichocarpa]

 Score =  617 bits (1591), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 319/358 (89%), Positives = 339/358 (94%)

Query: 1   MPLQKEPQSNLISVSSGHRENWGESNMAEASPITDTSTDDTEDKNQRFERGQLTAVAASD 60
           +PLQKE Q N +S+   H ENWGE++MAEASP TDTSTDDT+DKNQRFERGQ TA+ ASD
Sbjct: 106 LPLQKEVQVNPVSIPGNHPENWGETSMAEASPRTDTSTDDTDDKNQRFERGQSTAIVASD 165

Query: 61  SSDKSKEKSGDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQG 120
           SSDKSKEK+GDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQG
Sbjct: 166 SSDKSKEKAGDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQG 225

Query: 121 IFISSSGDQSHSMSGNGAAAFDVEYSRWLEEHNRHIVELRAAVNSHAGDTELRTIVDNVT 180
           IFISSSGDQ+HSMSGNGA AFD EYSRWLEE NRHI ELRAAVNSHAGDTEL TIVDNV 
Sbjct: 226 IFISSSGDQTHSMSGNGALAFDAEYSRWLEEQNRHISELRAAVNSHAGDTELHTIVDNVV 285

Query: 181 SHFDEIFRLKGIASKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQQ 240
           +HF+E++RLKG A+KADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQQ
Sbjct: 286 AHFNEVYRLKGTAAKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQQ 345

Query: 241 LVGIYNLQQSSQQAEDALSQGMDALQQSLAETLANGSPSPSGTSGNVANYMGQMAMAMGK 300
           L+GIYNLQQSSQQAEDALSQGM+ALQQSLAETLANG+P  SG+SGNVANYMGQMAMAMGK
Sbjct: 346 LMGIYNLQQSSQQAEDALSQGMEALQQSLAETLANGNPGSSGSSGNVANYMGQMAMAMGK 405

Query: 301 LGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDYFSRLRALSSLWLARPRE 358
           LGTLEGFLRQADNLRQQTL+QMHRILTTRQSARALLAINDYFSRLRALSSLWLARP+E
Sbjct: 406 LGTLEGFLRQADNLRQQTLEQMHRILTTRQSARALLAINDYFSRLRALSSLWLARPQE 463

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359482245|ref|XP_003632741.1| PREDICTED: TGACG-sequence-specific DNA-binding protein TGA-2.1-like [Vitis vinifera] gi|297739945|emb|CBI30127.3| unnamed protein product [Vitis vinifera]

 Score =  614 bits (1583), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 313/357 (87%), Positives = 335/357 (93%), Gaps = 1/357 (0%)

Query: 3   LQKEPQSNLISVSSGHRENWGESNMAEASP-ITDTSTDDTEDKNQRFERGQLTAVAASDS 61
           +QKE Q N+ SVS  HRENWGESNMA+ASP    ++  DT++KNQRFE GQ  A+ ASDS
Sbjct: 95  VQKELQQNIASVSGSHRENWGESNMADASPRTDTSTDVDTDEKNQRFEMGQSAALVASDS 154

Query: 62  SDKSKEKSGDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGI 121
           SD+SKEK+GDQKTLRRLAQNREAARKSRLRKKAYVQQLE+SR+KLTQLEQELQRARQQGI
Sbjct: 155 SDRSKEKAGDQKTLRRLAQNREAARKSRLRKKAYVQQLENSRMKLTQLEQELQRARQQGI 214

Query: 122 FISSSGDQSHSMSGNGAAAFDVEYSRWLEEHNRHIVELRAAVNSHAGDTELRTIVDNVTS 181
           FISSSGDQSHSMSGNGA AFDVEY+RWLEEHNR I ELR+AVNSHA DTELRTIVDNVT+
Sbjct: 215 FISSSGDQSHSMSGNGALAFDVEYARWLEEHNRQINELRSAVNSHASDTELRTIVDNVTA 274

Query: 182 HFDEIFRLKGIASKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQQL 241
           HFD+IFRLKGIA+KADVFHILSGMWKTPAERCFMWIGGFRSSE+LKLLVNQLEPLTEQQL
Sbjct: 275 HFDDIFRLKGIAAKADVFHILSGMWKTPAERCFMWIGGFRSSEVLKLLVNQLEPLTEQQL 334

Query: 242 VGIYNLQQSSQQAEDALSQGMDALQQSLAETLANGSPSPSGTSGNVANYMGQMAMAMGKL 301
           + IYNLQQSSQQAEDALSQGM+ALQQSLAETL +GSP PSG+SGNVANYMGQMAMAMGKL
Sbjct: 335 MSIYNLQQSSQQAEDALSQGMEALQQSLAETLTSGSPGPSGSSGNVANYMGQMAMAMGKL 394

Query: 302 GTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDYFSRLRALSSLWLARPRE 358
           GTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDYFSRLRALSSLWLARPRE
Sbjct: 395 GTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDYFSRLRALSSLWLARPRE 451

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449437717|ref|XP_004136637.1| PREDICTED: TGACG-sequence-specific DNA-binding protein TGA-2.1-like [Cucumis sativus]

 Score =  610 bits (1572), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 307/358 (85%), Positives = 334/358 (93%)

Query: 1   MPLQKEPQSNLISVSSGHRENWGESNMAEASPITDTSTDDTEDKNQRFERGQLTAVAASD 60
           +PLQKE  +NL+S S G RENWGESNMA+ S  TDTSTDDT+DK+QR ++ Q  ++A  D
Sbjct: 113 LPLQKESNANLVSTSGGPRENWGESNMADTSTRTDTSTDDTDDKSQRLDKDQGNSLAVYD 172

Query: 61  SSDKSKEKSGDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQG 120
           SS+KSKEK+ DQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQG
Sbjct: 173 SSNKSKEKTADQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQG 232

Query: 121 IFISSSGDQSHSMSGNGAAAFDVEYSRWLEEHNRHIVELRAAVNSHAGDTELRTIVDNVT 180
           IFIS+SGDQ+HSMSGNGA AFDVEYSRWLEEHNR + ELRAAVNSHAGDTELRTIVDNVT
Sbjct: 233 IFISNSGDQAHSMSGNGALAFDVEYSRWLEEHNRLMNELRAAVNSHAGDTELRTIVDNVT 292

Query: 181 SHFDEIFRLKGIASKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQQ 240
           + FD+IFRLKGIA+KADVFHILSGMWKTPAERCF+WIGGFRSSE+LKLLV+QLEPL EQQ
Sbjct: 293 TQFDDIFRLKGIAAKADVFHILSGMWKTPAERCFLWIGGFRSSEILKLLVSQLEPLAEQQ 352

Query: 241 LVGIYNLQQSSQQAEDALSQGMDALQQSLAETLANGSPSPSGTSGNVANYMGQMAMAMGK 300
           L+GI NLQQ SQQAEDALSQGMDALQQSLAETLA+ +P+ SG+SGNVANYMGQMAMAMGK
Sbjct: 353 LMGICNLQQLSQQAEDALSQGMDALQQSLAETLASATPATSGSSGNVANYMGQMAMAMGK 412

Query: 301 LGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDYFSRLRALSSLWLARPRE 358
           LGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDYFSRLRALSSLWLARPR+
Sbjct: 413 LGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDYFSRLRALSSLWLARPRD 470

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357509409|ref|XP_003624993.1| TGA transcription factor [Medicago truncatula] gi|355500008|gb|AES81211.1| TGA transcription factor [Medicago truncatula]

 Score =  608 bits (1568), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 302/358 (84%), Positives = 324/358 (90%), Gaps = 11/358 (3%)

Query: 1   MPLQKEPQSNLISVSSGHRENWGESNMAEASPITDTSTDDTEDKNQRFERGQLTAVAASD 60
           + LQK+   NL S S GHRENWGESNMAE S   DTSTDDTEDKNQ  ERG        +
Sbjct: 106 LQLQKDAMPNLASTSGGHRENWGESNMAEGS--ADTSTDDTEDKNQMPERG--------E 155

Query: 61  SSDKSKEKSGDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQG 120
           SS++SK+KS DQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQG
Sbjct: 156 SSERSKDKS-DQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQG 214

Query: 121 IFISSSGDQSHSMSGNGAAAFDVEYSRWLEEHNRHIVELRAAVNSHAGDTELRTIVDNVT 180
           IFISS+G+Q+HSMSGNGA AFD EY+RWLEEHNR   ELRAA+NSHAGD ELRTIVDN  
Sbjct: 215 IFISSTGEQTHSMSGNGAMAFDAEYARWLEEHNRQTNELRAAINSHAGDIELRTIVDNFM 274

Query: 181 SHFDEIFRLKGIASKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQQ 240
           + F++I+RLKG+A+KADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLV+ LEPLTEQQ
Sbjct: 275 TQFEDIYRLKGVAAKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVSHLEPLTEQQ 334

Query: 241 LVGIYNLQQSSQQAEDALSQGMDALQQSLAETLANGSPSPSGTSGNVANYMGQMAMAMGK 300
           L+GIYNLQQSSQQAEDALSQGMDALQQSL+ETLANGSP+PSG SGNVANYMGQMAMAMGK
Sbjct: 335 LMGIYNLQQSSQQAEDALSQGMDALQQSLSETLANGSPNPSGASGNVANYMGQMAMAMGK 394

Query: 301 LGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDYFSRLRALSSLWLARPRE 358
           LGTLEGFLRQADNLRQQTLQQM RILTTRQSARALLAI+DYFSRLRALSSLWLARPRE
Sbjct: 395 LGTLEGFLRQADNLRQQTLQQMLRILTTRQSARALLAISDYFSRLRALSSLWLARPRE 452

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357509411|ref|XP_003624994.1| TGA transcription factor [Medicago truncatula] gi|355500009|gb|AES81212.1| TGA transcription factor [Medicago truncatula]

 Score =  608 bits (1568), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 302/358 (84%), Positives = 324/358 (90%), Gaps = 11/358 (3%)

Query: 1   MPLQKEPQSNLISVSSGHRENWGESNMAEASPITDTSTDDTEDKNQRFERGQLTAVAASD 60
           + LQK+   NL S S GHRENWGESNMAE S   DTSTDDTEDKNQ  ERG        +
Sbjct: 49  LQLQKDAMPNLASTSGGHRENWGESNMAEGS--ADTSTDDTEDKNQMPERG--------E 98

Query: 61  SSDKSKEKSGDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQG 120
           SS++SK+KS DQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQG
Sbjct: 99  SSERSKDKS-DQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQG 157

Query: 121 IFISSSGDQSHSMSGNGAAAFDVEYSRWLEEHNRHIVELRAAVNSHAGDTELRTIVDNVT 180
           IFISS+G+Q+HSMSGNGA AFD EY+RWLEEHNR   ELRAA+NSHAGD ELRTIVDN  
Sbjct: 158 IFISSTGEQTHSMSGNGAMAFDAEYARWLEEHNRQTNELRAAINSHAGDIELRTIVDNFM 217

Query: 181 SHFDEIFRLKGIASKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQQ 240
           + F++I+RLKG+A+KADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLV+ LEPLTEQQ
Sbjct: 218 TQFEDIYRLKGVAAKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVSHLEPLTEQQ 277

Query: 241 LVGIYNLQQSSQQAEDALSQGMDALQQSLAETLANGSPSPSGTSGNVANYMGQMAMAMGK 300
           L+GIYNLQQSSQQAEDALSQGMDALQQSL+ETLANGSP+PSG SGNVANYMGQMAMAMGK
Sbjct: 278 LMGIYNLQQSSQQAEDALSQGMDALQQSLSETLANGSPNPSGASGNVANYMGQMAMAMGK 337

Query: 301 LGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDYFSRLRALSSLWLARPRE 358
           LGTLEGFLRQADNLRQQTLQQM RILTTRQSARALLAI+DYFSRLRALSSLWLARPRE
Sbjct: 338 LGTLEGFLRQADNLRQQTLQQMLRILTTRQSARALLAISDYFSRLRALSSLWLARPRE 395

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449506021|ref|XP_004162630.1| PREDICTED: LOW QUALITY PROTEIN: TGACG-sequence-specific DNA-binding protein TGA-2.1-like [Cucumis sativus]

 Score =  605 bits (1560), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 307/359 (85%), Positives = 334/359 (93%), Gaps = 1/359 (0%)

Query: 1   MPLQKEPQSNLISVSSGHRENWGESNMAEASPITDTSTDDTEDKNQRFERGQLTAVAASD 60
           +PLQKE  +NL+S S G RENWGESNMA+ S  TDTSTDDT+DK+QR ++ Q  ++A  D
Sbjct: 113 LPLQKESNANLVSTSGGPRENWGESNMADTSTRTDTSTDDTDDKSQRLDKDQGNSLAVYD 172

Query: 61  SSDKSKEKSGDQKTLRRLAQNREAARKSRLRKK-AYVQQLESSRLKLTQLEQELQRARQQ 119
           SS+KSKEK+ DQKTLRRLAQNREAARKSRLRKK AYVQQLESSRLKLTQLEQELQRARQQ
Sbjct: 173 SSNKSKEKTADQKTLRRLAQNREAARKSRLRKKXAYVQQLESSRLKLTQLEQELQRARQQ 232

Query: 120 GIFISSSGDQSHSMSGNGAAAFDVEYSRWLEEHNRHIVELRAAVNSHAGDTELRTIVDNV 179
           GIFIS+SGDQ+HSMSGNGA AFDVEYSRWLEEHNR + ELRAAVNSHAGDTELRTIVDNV
Sbjct: 233 GIFISNSGDQAHSMSGNGALAFDVEYSRWLEEHNRLMNELRAAVNSHAGDTELRTIVDNV 292

Query: 180 TSHFDEIFRLKGIASKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQ 239
           T+ FD+IFRLKGIA+KADVFHILSGMWKTPAERCF+WIGGFRSSE+LKLLV+QLEPL EQ
Sbjct: 293 TTQFDDIFRLKGIAAKADVFHILSGMWKTPAERCFLWIGGFRSSEILKLLVSQLEPLAEQ 352

Query: 240 QLVGIYNLQQSSQQAEDALSQGMDALQQSLAETLANGSPSPSGTSGNVANYMGQMAMAMG 299
           QL+GI NLQQ SQQAEDALSQGMDALQQSLAETLA+ +P+ SG+SGNVANYMGQMAMAMG
Sbjct: 353 QLMGICNLQQLSQQAEDALSQGMDALQQSLAETLASATPATSGSSGNVANYMGQMAMAMG 412

Query: 300 KLGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDYFSRLRALSSLWLARPRE 358
           KLGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDYFSRLRALSSLWLARPR+
Sbjct: 413 KLGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDYFSRLRALSSLWLARPRD 471

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359487138|ref|XP_002263159.2| PREDICTED: transcription factor HBP-1b(c1)-like [Vitis vinifera] gi|296087850|emb|CBI35106.3| unnamed protein product [Vitis vinifera]

 Score =  600 bits (1546), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 304/359 (84%), Positives = 333/359 (92%), Gaps = 2/359 (0%)

Query: 1   MPLQKEPQSNLISVSSGHRENWGESNMAEASPITDTSTD-DTEDKNQRFERGQLTAVAAS 59
           +PLQK  QSNL+S+SSG  ENWGES MA+ASP TD STD DT+DK QRFERGQ  +  AS
Sbjct: 112 LPLQKGQQSNLVSISSGSVENWGESAMADASPRTDISTDVDTDDKVQRFERGQPASNMAS 171

Query: 60  DSSDKSKEKSGDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQ 119
           DSSD+SK+K+ DQKTLRRLAQNREAARKSRLRKKAYVQQLESSR+KLTQLEQELQRARQQ
Sbjct: 172 DSSDRSKDKN-DQKTLRRLAQNREAARKSRLRKKAYVQQLESSRMKLTQLEQELQRARQQ 230

Query: 120 GIFISSSGDQSHSMSGNGAAAFDVEYSRWLEEHNRHIVELRAAVNSHAGDTELRTIVDNV 179
           GIFISSSGDQ+HSMSGNGA AFDVEY+RWLEE NR I ELR+AVNSHA D ELR IVDN+
Sbjct: 231 GIFISSSGDQAHSMSGNGAMAFDVEYARWLEEQNRQINELRSAVNSHASDAELRVIVDNI 290

Query: 180 TSHFDEIFRLKGIASKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQ 239
            +H+D+IFRLKG+A+KADVFH+LSGMWKTPAERCF+W+GGFRSSELLKLLVNQLEPLTEQ
Sbjct: 291 MAHYDDIFRLKGVAAKADVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLVNQLEPLTEQ 350

Query: 240 QLVGIYNLQQSSQQAEDALSQGMDALQQSLAETLANGSPSPSGTSGNVANYMGQMAMAMG 299
           QL+GI NLQQSSQQAEDALSQGM+ALQQSLAETL++GS   SG+SGNVANYMGQMAMAMG
Sbjct: 351 QLLGIGNLQQSSQQAEDALSQGMEALQQSLAETLSSGSLGSSGSSGNVANYMGQMAMAMG 410

Query: 300 KLGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDYFSRLRALSSLWLARPRE 358
           KLGTLEGF+RQADNLRQQTLQQMHRILTTRQSARALLAI+DYFSRLRALSSLWLARPRE
Sbjct: 411 KLGTLEGFIRQADNLRQQTLQQMHRILTTRQSARALLAIHDYFSRLRALSSLWLARPRE 469

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255543929|ref|XP_002513027.1| Transcription factor HBP-1b(c1), putative [Ricinus communis] gi|223548038|gb|EEF49530.1| Transcription factor HBP-1b(c1), putative [Ricinus communis]

 Score =  595 bits (1533), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 303/359 (84%), Positives = 332/359 (92%), Gaps = 2/359 (0%)

Query: 1   MPLQKEPQSNLISVSSGHRENWGESNMAEASPITDTSTD-DTEDKNQRFERGQLTAVAAS 59
           +PL+K  Q N+I++SSG+ ENW ESNMA+ SP TD STD DT+DKNQRF+RG  TA+AAS
Sbjct: 106 LPLEKGQQLNIIALSSGNTENWEESNMADGSPRTDLSTDGDTDDKNQRFDRGLSTAIAAS 165

Query: 60  DSSDKSKEKSGDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQ 119
           DSSD+SK+K  DQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQ
Sbjct: 166 DSSDRSKDKM-DQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQ 224

Query: 120 GIFISSSGDQSHSMSGNGAAAFDVEYSRWLEEHNRHIVELRAAVNSHAGDTELRTIVDNV 179
           GIFISSSGDQ+HSMSGNGA AFDVEY+RWLEE NR I ELR+AVNSHAGD ELR I+D V
Sbjct: 225 GIFISSSGDQAHSMSGNGAMAFDVEYARWLEEQNRQINELRSAVNSHAGDAELRIIIDGV 284

Query: 180 TSHFDEIFRLKGIASKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQ 239
            +H+DEIFRLK  A+KADVFH+LSGMWKTPAERCF+W+GGFRSSELLKLLVNQLEPLTEQ
Sbjct: 285 MAHYDEIFRLKSNAAKADVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLVNQLEPLTEQ 344

Query: 240 QLVGIYNLQQSSQQAEDALSQGMDALQQSLAETLANGSPSPSGTSGNVANYMGQMAMAMG 299
           QLVG+ NLQQSSQQAEDALSQGM+ALQQSLAETL++GS   SG+SGNVANYMGQMAMAMG
Sbjct: 345 QLVGLGNLQQSSQQAEDALSQGMEALQQSLAETLSSGSLGSSGSSGNVANYMGQMAMAMG 404

Query: 300 KLGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDYFSRLRALSSLWLARPRE 358
           KLGTLEGF+RQADNLRQQTLQQMHRILTTRQSARALLAI+DYFSRLRALSSLWLARPRE
Sbjct: 405 KLGTLEGFIRQADNLRQQTLQQMHRILTTRQSARALLAIHDYFSRLRALSSLWLARPRE 463

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|124361259|gb|ABN09201.1| TGA transcription factor 2 [Populus tremula x Populus alba]

 Score =  586 bits (1511), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 305/332 (91%), Positives = 321/332 (96%)

Query: 27  MAEASPITDTSTDDTEDKNQRFERGQLTAVAASDSSDKSKEKSGDQKTLRRLAQNREAAR 86
           MAEASP TDTSTDDT+DKNQRFERGQ TA++A DSSDKSKEK+GDQKTLRRLAQNREAAR
Sbjct: 1   MAEASPRTDTSTDDTDDKNQRFERGQSTAISAPDSSDKSKEKTGDQKTLRRLAQNREAAR 60

Query: 87  KSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSSGDQSHSMSGNGAAAFDVEYS 146
           KSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSSGDQ+HSMSGNGA AFD EYS
Sbjct: 61  KSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSSGDQTHSMSGNGALAFDAEYS 120

Query: 147 RWLEEHNRHIVELRAAVNSHAGDTELRTIVDNVTSHFDEIFRLKGIASKADVFHILSGMW 206
           RWLEE NRHI ELRAAVNSHAGDTELRTIVDNV +HF+E++RLKG A+KADVFHILSGMW
Sbjct: 121 RWLEEQNRHISELRAAVNSHAGDTELRTIVDNVVAHFNEVYRLKGTAAKADVFHILSGMW 180

Query: 207 KTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQQLVGIYNLQQSSQQAEDALSQGMDALQ 266
           KTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQQL+GIYNLQQSSQQAEDALSQGM+ALQ
Sbjct: 181 KTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQQLMGIYNLQQSSQQAEDALSQGMEALQ 240

Query: 267 QSLAETLANGSPSPSGTSGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRIL 326
           QSLAETLANG+P  SG+SGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTL+QMHRIL
Sbjct: 241 QSLAETLANGNPGSSGSSGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLEQMHRIL 300

Query: 327 TTRQSARALLAINDYFSRLRALSSLWLARPRE 358
           TTRQSARALLAINDYFSRLRALSSLWLARP+E
Sbjct: 301 TTRQSARALLAINDYFSRLRALSSLWLARPQE 332

Source: Populus tremula x Populus alba

Species: Populus tremula x Populus alba

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	358
UNIPROTKB|Q9SQK1	325	TGA2.2 "BZIP transcription fac	0.860	0.947	0.719	1.3e-109
TAIR|locus:2169394	330	AHBP-1B "AT5G06950" [Arabidops	0.877	0.951	0.655	2e-102
TAIR|locus:2082234	355	TGA6 "AT3G12250" [Arabidopsis	0.810	0.816	0.662	1.4e-99
TAIR|locus:2169409	330	OBF5 "AT5G06960" [Arabidopsis	0.871	0.945	0.629	9.4e-98
TAIR|locus:2026890	452	PAN "AT1G68640" [Arabidopsis t	0.879	0.696	0.615	3e-94
TAIR|locus:2199968	481	TGA9 "AT1G08320" [Arabidopsis	0.726	0.540	0.577	3.4e-77
TAIR|locus:2030551	384	TGA3 "AT1G22070" [Arabidopsis	0.740	0.690	0.532	1.3e-68
TAIR|locus:2184078	364	TGA4 "AT5G10030" [Arabidopsis	0.734	0.722	0.521	1.7e-68
TAIR|locus:2029366	368	TGA7 "AT1G77920" [Arabidopsis	0.868	0.845	0.466	1.9e-67
TAIR|locus:2171820	368	TGA1 "AT5G65210" [Arabidopsis	0.734	0.714	0.514	2.8e-66

UNIPROTKB|Q9SQK1 TGA2.2 "BZIP transcription factor" [Nicotiana tabacum (taxid:4097)]

 Score = 1083 (386.3 bits), Expect = 1.3e-109, P = 1.3e-109
 Identities = 228/317 (71%), Positives = 247/317 (77%)

Query:    27 MAEASPITDTSTD-DTEDKNQRFERGQLTAVAAXXXXXXXXXXXXXQKTLRRLAQNREAA 85
             MA+ SP   TSTD DTEDKN+     QL AVA+             QKTLRRLAQNREAA
Sbjct:     1 MADISP--STSTDADTEDKNRFLNSQQLGAVASDGSDRTRD-----QKTLRRLAQNREAA 53

Query:    86 RKSRLRKKAYVQQLESSRLKLTXXXXXXXXXXXXGIFIXXXXXXXXXXXGNGAAAFDVEY 145
             RKSRLRKKAYVQQLESSR+KLT            GIFI           GNGA AFDVEY
Sbjct:    54 RKSRLRKKAYVQQLESSRMKLTQLEQELQRARQQGIFISGSGDQSQSMSGNGALAFDVEY 113

Query:   146 SRWLEEHNRHIVELRAAVNSHAGDTELRTIVDNVTSHFDEIFRLKGIASKADVFHILSGM 205
             +RWLEE NR I ELR AVNSHAGD ELR IVD + +H+D+IFR+KG A+K+DVFHILSGM
Sbjct:   114 ARWLEEQNRRINELRGAVNSHAGDGELRIIVDGILAHYDDIFRIKGDAAKSDVFHILSGM 173

Query:   206 WKTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQQLVGIYNLQQSSQQAEDALSQGMDAL 265
             WKTPAERCF+W+GGFRSSELLKLL+NQLEPLTEQQL+ I NLQQSSQQAEDALSQGM+AL
Sbjct:   174 WKTPAERCFLWLGGFRSSELLKLLINQLEPLTEQQLLAINNLQQSSQQAEDALSQGMEAL 233

Query:   266 QQSLAETLANXXXXXXXXXXNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRI 325
             QQSLAETLA           NVANYMGQMAMAMGKLGTLEGF+RQADNLRQQTLQQMHRI
Sbjct:   234 QQSLAETLAGSLGPSSSSG-NVANYMGQMAMAMGKLGTLEGFIRQADNLRQQTLQQMHRI 292

Query:   326 LTTRQSARALLAINDYF 342
             LTTRQSARALLAI+DYF
Sbjct:   293 LTTRQSARALLAISDYF 309

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2169394 AHBP-1B "AT5G06950" [Arabidopsis thaliana (taxid:3702)]

 Score = 1015 (362.4 bits), Expect = 2.0e-102, P = 2.0e-102
 Identities = 207/316 (65%), Positives = 239/316 (75%)

Query:    27 MAEASPITDTSTDDTEDKNQRFERGQLTAVAAXXXXXXXXXXXXXQKTLRRLAQNREAAR 86
             MA+ SP TD STDD  D       G L   AA             QKTLRRLAQNREAAR
Sbjct:     1 MADTSPRTDVSTDDDTDHPDLGSEGALVNTAASDSSDRSKGKMD-QKTLRRLAQNREAAR 59

Query:    87 KSRLRKKAYVQQLESSRLKLTXXXXXXXXXXXXGIFIXXXXXXXXXXXGNGAAAFDVEYS 146
             KSRLRKKAYVQQLE+SRLKLT            G+FI           GNGA AFD E+S
Sbjct:    60 KSRLRKKAYVQQLENSRLKLTQLEQELQRARQQGVFISGTGDQAHSTGGNGALAFDAEHS 119

Query:   147 RWLEEHNRHIVELRAAVNSHAGDTELRTIVDNVTSHFDEIFRLKGIASKADVFHILSGMW 206
             RWLEE N+ + ELR+A+N+HAGD+ELR IVD V +H++E+FR+K  A+K DVFH+LSGMW
Sbjct:   120 RWLEEKNKQMNELRSALNAHAGDSELRIIVDGVMAHYEELFRIKSNAAKNDVFHLLSGMW 179

Query:   207 KTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQQLVGIYNLQQSSQQAEDALSQGMDALQ 266
             KTPAERCF+W+GGFRSSELLKLL NQLEP+TE+QL+GI NLQQ+SQQAEDALSQGM++LQ
Sbjct:   180 KTPAERCFLWLGGFRSSELLKLLANQLEPMTERQLMGINNLQQTSQQAEDALSQGMESLQ 239

Query:   267 QSLAETLANXXXXXXXXXXNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRIL 326
             QSLA+TL++          NVA+YMGQMAMAMGKLGTLEGF+RQADNLR QTLQQM R+L
Sbjct:   240 QSLADTLSSGTLGSSSSG-NVASYMGQMAMAMGKLGTLEGFIRQADNLRLQTLQQMIRVL 298

Query:   327 TTRQSARALLAINDYF 342
             TTRQSARALLAI+DYF
Sbjct:   299 TTRQSARALLAIHDYF 314

GO:0003677 "DNA binding" evidence=ISS;IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;IDA;TAS

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA;IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA;TAS

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IGI

GO:0009410 "response to xenobiotic stimulus" evidence=IGI;RCA

GO:0007062 "sister chromatid cohesion" evidence=RCA

GO:0009617 "response to bacterium" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0031048 "chromatin silencing by small RNA" evidence=RCA

GO:0045132 "meiotic chromosome segregation" evidence=RCA

GO:0048522 "positive regulation of cellular process" evidence=RCA

TAIR|locus:2082234 TGA6 "AT3G12250" [Arabidopsis thaliana (taxid:3702)]

 Score = 963 (344.1 bits), Expect = 1.4e-99, Sum P(2) = 1.4e-99
 Identities = 194/293 (66%), Positives = 229/293 (78%)

Query:    49 ERGQLTAVAAXXXXXXXXXXXXXQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTX 108
             +RG + A A+             QKTLRRLAQNREAARKSRLRKKAYVQQLE+SRLKLT 
Sbjct:    49 DRGHMHAAASDSSDRSKDKLD--QKTLRRLAQNREAARKSRLRKKAYVQQLENSRLKLTQ 106

Query:   109 XXXXXXXXXXXGIFIXXXXXXXXXXXGNGAAAFDVEYSRWLEEHNRHIVELRAAVNSHAG 168
                        G+FI           GNGA AFD E+SRWLEE NR + ELR+A+N+HAG
Sbjct:   107 LEQELQRARQQGVFISSSGDQAHSTGGNGALAFDAEHSRWLEEKNRQMNELRSALNAHAG 166

Query:   169 DTELRTIVDNVTSHFDEIFRLKGIASKADVFHILSGMWKTPAERCFMWIGGFRSSELLKL 228
             DTELR IVD V +H++E+FR+K  A+K DVFH+LSGMWKTPAERCF+W+GGFRSSELLKL
Sbjct:   167 DTELRIIVDGVMAHYEELFRIKSNAAKNDVFHLLSGMWKTPAERCFLWLGGFRSSELLKL 226

Query:   229 LVNQLEPLTEQQLVGIYNLQQSSQQAEDALSQGMDALQQSLAETLANXXXXXXXXXXNVA 288
             L NQLEP+TE+Q++GI +LQQ+SQQAEDALSQGM++LQQSLA+TL++          NVA
Sbjct:   227 LANQLEPMTERQVMGINSLQQTSQQAEDALSQGMESLQQSLADTLSSGTLGSSSSD-NVA 285

Query:   289 NYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDY 341
             +YMGQMAMAMG+LGTLEGF+RQADNLR QTLQQM R+LTTRQSARALLAI+DY
Sbjct:   286 SYMGQMAMAMGQLGTLEGFIRQADNLRLQTLQQMLRVLTTRQSARALLAIHDY 338

GO:0003677 "DNA binding" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA;IMP

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0009627 "systemic acquired resistance" evidence=IPI

GO:0005515 "protein binding" evidence=IPI

GO:0009410 "response to xenobiotic stimulus" evidence=IGI;RCA

GO:0009617 "response to bacterium" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

TAIR|locus:2169409 OBF5 "AT5G06960" [Arabidopsis thaliana (taxid:3702)]

 Score = 971 (346.9 bits), Expect = 9.4e-98, P = 9.4e-98
 Identities = 199/316 (62%), Positives = 235/316 (74%)

Query:    27 MAEASPITDTSTD-DTEDKNQRFERGQLTAVAAXXXXXXXXXXXXXQKTLRRLAQNREAA 85
             M + SP T  STD DT+  N  F+ G L  + A             QKTLRRLAQNREAA
Sbjct:     1 MGDTSPRTSVSTDGDTDHNNLMFDEGHL-GIGASDSSDRSKSKMD-QKTLRRLAQNREAA 58

Query:    86 RKSRLRKKAYVQQLESSRLKLTXXXXXXXXXXXXGIFIXXXXXXXXXXXGNGAAAFDVEY 145
             RKSRLRKKAYVQQLE+SRLKLT            G+FI           G+GA AFDVEY
Sbjct:    59 RKSRLRKKAYVQQLENSRLKLTQLEQELQRARQQGVFISSSGDQAHSTAGDGAMAFDVEY 118

Query:   146 SRWLEEHNRHIVELRAAVNSHAGDTELRTIVDNVTSHFDEIFRLKGIASKADVFHILSGM 205
              RW E+ NR + EL +A++SHA D+ELR IVD V +H++E++R+KG A+K+DVFH+LSGM
Sbjct:   119 RRWQEDKNRQMKELSSAIDSHATDSELRIIVDGVIAHYEELYRIKGNAAKSDVFHLLSGM 178

Query:   206 WKTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQQLVGIYNLQQSSQQAEDALSQGMDAL 265
             WKTPAERCF+W+GGFRSSELLKL+ +QLEPLTEQQ + I NLQQSSQQAEDALSQGMD L
Sbjct:   179 WKTPAERCFLWLGGFRSSELLKLIASQLEPLTEQQSLDINNLQQSSQQAEDALSQGMDNL 238

Query:   266 QQSLAETLANXXXXXXXXXXNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRI 325
             QQSLA+TL++          NVA+YMGQMAMAMGKLGTLEGF+RQADNLR QT QQM R+
Sbjct:   239 QQSLADTLSSGTLGSSSSG-NVASYMGQMAMAMGKLGTLEGFIRQADNLRLQTYQQMVRL 297

Query:   326 LTTRQSARALLAINDY 341
             LTTRQSARALLA+++Y
Sbjct:   298 LTTRQSARALLAVHNY 313

GO:0003677 "DNA binding" evidence=ISS;IDA;NAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0042802 "identical protein binding" evidence=IPI

GO:0009410 "response to xenobiotic stimulus" evidence=IGI;RCA

GO:0000278 "mitotic cell cycle" evidence=RCA

GO:0000303 "response to superoxide" evidence=RCA

GO:0006396 "RNA processing" evidence=RCA

GO:0008219 "cell death" evidence=RCA

GO:0009617 "response to bacterium" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009743 "response to carbohydrate stimulus" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009873 "ethylene mediated signaling pathway" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0048522 "positive regulation of cellular process" evidence=RCA

GO:0009814 "defense response, incompatible interaction" evidence=TAS

TAIR|locus:2026890 PAN "AT1G68640" [Arabidopsis thaliana (taxid:3702)]

 Score = 938 (335.3 bits), Expect = 3.0e-94, P = 3.0e-94
 Identities = 197/320 (61%), Positives = 229/320 (71%)

Query:    25 SNMAEASPITDTSTD-DTEDKNQRFERGQLTAVAAXXXXXXXXXXXXXQKTLRRLAQNRE 83
             S MA+ S  TDTSTD DT+DK Q    G    + A             Q+TLRRLAQNRE
Sbjct:   118 SAMADNSQHTDTSTDIDTDDKTQ-LNGGHQGMLLATNCSDQSNVKSSDQRTLRRLAQNRE 176

Query:    84 AARKSRLRKKAYVQQLESSRLKLTXXXXXXXXXXXXGIFIXXXXXXXXX--XXGNGAAAF 141
             AARKSRLRKKAYVQQLE+SR++L             G  +             GNG  +F
Sbjct:   177 AARKSRLRKKAYVQQLENSRIRLAQLEEELKRARQQGSLVERGVSADHTHLAAGNGVFSF 236

Query:   142 DVEYSRWLEEHNRHIVELRAAVNSHAGDTELRTIVDNVTSHFDEIFRLKGIASKADVFHI 201
             ++EY+RW EEH R I +LR+ VNS  GD +LR +VD V SH+DEIFRLKGI +K DVFH+
Sbjct:   237 ELEYTRWKEEHQRMINDLRSGVNSQLGDNDLRVLVDAVMSHYDEIFRLKGIGTKVDVFHM 296

Query:   202 LSGMWKTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQQLVGIYNLQQSSQQAEDALSQG 261
             LSGMWKTPAER FMW+GGFRSSELLK+L N ++PLT+QQL+GI NLQQSSQQAEDALSQG
Sbjct:   297 LSGMWKTPAERFFMWLGGFRSSELLKILGNHVDPLTDQQLIGICNLQQSSQQAEDALSQG 356

Query:   262 MDALQQSLAETLANXXXXXXXXXXNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQ 321
             M+ALQQSL ETL++          NVA+YMG MAMAMGKLGTLE FLRQAD LRQQTLQQ
Sbjct:   357 MEALQQSLLETLSSASMGPNSSA-NVADYMGHMAMAMGKLGTLENFLRQADLLRQQTLQQ 415

Query:   322 MHRILTTRQSARALLAINDY 341
             +HRILTTRQ+ARA L I+DY
Sbjct:   416 LHRILTTRQAARAFLVIHDY 435

GO:0003677 "DNA binding" evidence=ISS;IPI

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;IDA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0009909 "regulation of flower development" evidence=IMP

GO:0009410 "response to xenobiotic stimulus" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0048451 "petal formation" evidence=RCA

GO:0048453 "sepal formation" evidence=RCA

TAIR|locus:2199968 TGA9 "AT1G08320" [Arabidopsis thaliana (taxid:3702)]

 Score = 777 (278.6 bits), Expect = 3.4e-77, P = 3.4e-77
 Identities = 156/270 (57%), Positives = 198/270 (73%)

Query:    73 KTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTXXXXXXXXXXXXGIFIXXXXXXXXX 132
             KTLRRLAQNREAARKSRLRKKAYVQQLESSR+KL+            G+F+         
Sbjct:   178 KTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLSQLEQELQRARSQGLFMGGCGPPGPN 237

Query:   133 XXGNGAAAFDVEYSRWLEEHNRHIVELRAAVNSHAGDTELRTIVDNVTSHFDEIFRLKGI 192
                +GAA FD+EY RWLE+ NRH+ E+R  + +H  D +LR IVD   +HFDEIFRLK +
Sbjct:   238 IT-SGAAIFDMEYGRWLEDDNRHMSEIRTGLQAHLSDNDLRLIVDGYIAHFDEIFRLKAV 296

Query:   193 ASKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQQLVGIYNLQQSSQ 252
             A+KADVFH++ G W +PAERCF+W+ GFR S+L+K+LV+Q++ LTEQQL+GIY+LQ SSQ
Sbjct:   297 AAKADVFHLIIGTWMSPAERCFIWMAGFRPSDLIKILVSQMDLLTEQQLMGIYSLQHSSQ 356

Query:   253 QAEDALSQGMDALQQSLAETLANXXXXXXXXXXNVANYMGQMAMAMGKLGTLEGFLRQAD 312
             QAE+ALSQG++ LQQSL +TLA            V + M QMA+A+GK+  LEGF+RQAD
Sbjct:   357 QAEEALSQGLEQLQQSLIDTLA---------ASPVIDGMQQMAVALGKISNLEGFIRQAD 407

Query:   313 NLRQQTLQQMHRILTTRQSARALLAINDYF 342
             NLRQQT+ Q+ RILT RQ+AR  L I +Y+
Sbjct:   408 NLRQQTVHQLRRILTVRQAARCFLVIGEYY 437

GO:0003677 "DNA binding" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0009612 "response to mechanical stimulus" evidence=RCA

GO:0019722 "calcium-mediated signaling" evidence=RCA

TAIR|locus:2030551 TGA3 "AT1G22070" [Arabidopsis thaliana (taxid:3702)]

 Score = 696 (250.1 bits), Expect = 1.3e-68, P = 1.3e-68
 Identities = 146/274 (53%), Positives = 186/274 (67%)

Query:    73 KTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTXXXXXXXXXXXXGIFIXXXXXXXXX 132
             K  RRLAQNREAARKSRLRKKA+VQQLE SRLKL+            G+ +         
Sbjct:    98 KMKRRLAQNREAARKSRLRKKAHVQQLEESRLKLSQLEQELVRARQQGLCVRNSSDTSYL 157

Query:   133 X-XGN---GAAAFDVEYSRWLEEHNRHIVELRAAVNSHAGDTELRTIVDNVTSHFDEIFR 188
                GN   G AAF++EY+ WLEE NR + E+R A+ +H GD EL+ +VD+  +H+  +FR
Sbjct:   158 GPAGNMNSGIAAFEMEYTHWLEEQNRRVSEIRTALQAHIGDIELKMLVDSCLNHYANLFR 217

Query:   189 LKGIASKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQQLVGIYNLQ 248
             +K  A+KADVF ++SGMW+T  ER F WIGGFR SELL +++  +EPLT+QQL+ + NLQ
Sbjct:   218 MKADAAKADVFFLMSGMWRTSTERFFQWIGGFRPSELLNVVMPYVEPLTDQQLLEVRNLQ 277

Query:   249 QSSQQAEDALSQGMDALQQSLAETLANXXXXXXXXXXNVANYMGQMAMAMGKLGTLEGFL 308
             QSSQQAE+ALSQG+D LQQ L E++A              N+   MA AM  L  LE F+
Sbjct:   278 QSSQQAEEALSQGLDKLQQGLVESIA-----IQIKVVESVNHGAPMASAMENLQALESFV 332

Query:   309 RQADNLRQQTLQQMHRILTTRQSARALLAINDYF 342
              QAD+LRQQTLQQM +ILTTRQ+AR LLA+ +YF
Sbjct:   333 NQADHLRQQTLQQMSKILTTRQAARGLLALGEYF 366

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;RCA

GO:0005515 "protein binding" evidence=IPI

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA;IPI

GO:0005516 "calmodulin binding" evidence=IDA;TAS

GO:0042742 "defense response to bacterium" evidence=RCA;IMP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009410 "response to xenobiotic stimulus" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009617 "response to bacterium" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0016045 "detection of bacterium" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0031347 "regulation of defense response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

GO:0045088 "regulation of innate immune response" evidence=RCA

GO:0050776 "regulation of immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

GO:0051707 "response to other organism" evidence=RCA

GO:0003677 "DNA binding" evidence=IDA

TAIR|locus:2184078 TGA4 "AT5G10030" [Arabidopsis thaliana (taxid:3702)]

 Score = 695 (249.7 bits), Expect = 1.7e-68, P = 1.7e-68
 Identities = 143/274 (52%), Positives = 184/274 (67%)

Query:    73 KTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTXXXXXXXXXXXXGIFIX----XXXX 128
             K  RRLAQNREAARKSRLRKKAYVQQLE+SRLKL             G ++         
Sbjct:    80 KIQRRLAQNREAARKSRLRKKAYVQQLETSRLKLIHLEQELDRARQQGFYVGNGVDTNAL 139

Query:   129 XXXXXXGNGAAAFDVEYSRWLEEHNRHIVELRAAVNSHAGDTELRTIVDNVTSHFDEIFR 188
                    +G  AF++EY  W+EE NR I ELR  ++    D ELR++V+N   H+ ++FR
Sbjct:   140 SFSDNMSSGIVAFEMEYGHWVEEQNRQICELRTVLHGQVSDIELRSLVENAMKHYFQLFR 199

Query:   189 LKGIASKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQQLVGIYNLQ 248
             +K  A+K DVF+++SGMWKT AER F+WIGGFR SELLK+L+   +PLT+QQL+ + NL+
Sbjct:   200 MKSAAAKIDVFYVMSGMWKTSAERFFLWIGGFRPSELLKVLLPHFDPLTDQQLLDVCNLR 259

Query:   249 QSSQQAEDALSQGMDALQQSLAETLANXXXXXXXXXXNVANYMGQMAMAMGKLGTLEGFL 308
             QS QQAEDALSQGM+ LQ +LAE++A              +Y+ QM  AM +L  L  F+
Sbjct:   260 QSCQQAEDALSQGMEKLQHTLAESVA-------AGKLGEGSYIPQMTCAMERLEALVSFV 312

Query:   309 RQADNLRQQTLQQMHRILTTRQSARALLAINDYF 342
              QAD+LR +TLQQMHRILTTRQ+AR LLA+ +YF
Sbjct:   313 NQADHLRHETLQQMHRILTTRQAARGLLALGEYF 346

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;NAS

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005515 "protein binding" evidence=IPI

GO:0009409 "response to cold" evidence=IEP

GO:0042742 "defense response to bacterium" evidence=IGI

GO:0006857 "oligopeptide transport" evidence=RCA

GO:0009410 "response to xenobiotic stimulus" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0003677 "DNA binding" evidence=TAS

TAIR|locus:2029366 TGA7 "AT1G77920" [Arabidopsis thaliana (taxid:3702)]

 Score = 685 (246.2 bits), Expect = 1.9e-67, P = 1.9e-67
 Identities = 151/324 (46%), Positives = 198/324 (61%)

Query:    18 HRENWGESNMAEASPITDTSTDDTEDKNQRFERGQLTAVAAXXXXXXXXXXXXXQKTLRR 77
             H  N   S++ +  P  D   ++ +  N      Q+ A                 K  RR
Sbjct:    39 HSPNTATSSIIQVDPRIDDHNNNIKI-NYDSSHNQIEAEQPSSNDNQDDDGRIHDKMKRR 97

Query:    78 LAQNREAARKSRLRKKAYVQQLESSRLKLTXXXXXXXXXXXXGIFIXXXXXXXXXXXGNG 137
             LAQNREAARKSRLRKKAYVQQLE SRLKL+            G                G
Sbjct:    98 LAQNREAARKSRLRKKAYVQQLEESRLKLSQLEQELEKVKQQG------HLGPSGSINTG 151

Query:   138 AAAFDVEYSRWLEEHNRHIVELRAAVNSHAGDTELRTIVDNVTSHFDEIFRLKGIASKAD 197
              A+F++EYS WL+E +R + ELR A+ SH  D EL+ +V++  +H+  +F++K  A+KAD
Sbjct:   152 IASFEMEYSHWLQEQSRRVSELRTALQSHISDIELKMLVESCLNHYANLFQMKSDAAKAD 211

Query:   198 VFHILSGMWKTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQQLVGIYNLQQSSQQAEDA 257
             VF+++SGMW+T  ER F WIGGFR SELL +++  L+PLT+QQ++ + NLQQSSQQAEDA
Sbjct:   212 VFYLISGMWRTSTERFFQWIGGFRPSELLNVVMPYLQPLTDQQILEVRNLQQSSQQAEDA 271

Query:   258 LSQGMDALQQSLAETLANXXXXXXXXXXNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQ 317
             LSQG+D LQQSLAE++               +Y   MA A+  L  LEGF+ QAD+LRQQ
Sbjct:   272 LSQGIDKLQQSLAESIV------IDAVIESTHYPTHMAAAIENLQALEGFVNQADHLRQQ 325

Query:   318 TLQQMHRILTTRQSARALLAINDY 341
             TLQQM +ILTTRQSAR LLA+ +Y
Sbjct:   326 TLQQMAKILTTRQSARGLLALGEY 349

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005515 "protein binding" evidence=IPI

GO:0042742 "defense response to bacterium" evidence=IMP

GO:0009410 "response to xenobiotic stimulus" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

TAIR|locus:2171820 TGA1 "AT5G65210" [Arabidopsis thaliana (taxid:3702)]

 Score = 674 (242.3 bits), Expect = 2.8e-66, P = 2.8e-66
 Identities = 141/274 (51%), Positives = 183/274 (66%)

Query:    73 KTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTXXXXXXXXXXXXGIF----IXXXXX 128
             K  RRLAQNREAARKSRLRKKAYVQQLE+SRLKL             G +    I     
Sbjct:    84 KIQRRLAQNREAARKSRLRKKAYVQQLETSRLKLIQLEQELDRARQQGFYVGNGIDTNSL 143

Query:   129 XXXXXXGNGAAAFDVEYSRWLEEHNRHIVELRAAVNSHAGDTELRTIVDNVTSHFDEIFR 188
                     G AAF++EY  W+EE NR I ELR  ++ H  D ELR++V+N   H+ E+FR
Sbjct:   144 GFSETMNPGIAAFEMEYGHWVEEQNRQICELRTVLHGHINDIELRSLVENAMKHYFELFR 203

Query:   189 LKGIASKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQQLVGIYNLQ 248
             +K  A+KADVF ++SGMW+T AER F+WIGGFR S+LLK+L+   + LT+QQL+ + NL+
Sbjct:   204 MKSSAAKADVFFVMSGMWRTSAERFFLWIGGFRPSDLLKVLLPHFDVLTDQQLLDVCNLK 263

Query:   249 QSSQQAEDALSQGMDALQQSLAETLANXXXXXXXXXXNVANYMGQMAMAMGKLGTLEGFL 308
             QS QQAEDAL+QGM+ LQ +LA+ +A              +Y+ Q+  AM +L  L  F+
Sbjct:   264 QSCQQAEDALTQGMEKLQHTLADCVA-------AGQLGEGSYIPQVNSAMDRLEALVSFV 316

Query:   309 RQADNLRQQTLQQMHRILTTRQSARALLAINDYF 342
              QAD+LR +TLQQM+RILTTRQ+AR LLA+ +YF
Sbjct:   317 NQADHLRHETLQQMYRILTTRQAARGLLALGEYF 350

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005515 "protein binding" evidence=IPI

GO:0003677 "DNA binding" evidence=TAS

GO:0042742 "defense response to bacterium" evidence=IMP

GO:0043565 "sequence-specific DNA binding" evidence=IDA

GO:0009410 "response to xenobiotic stimulus" evidence=RCA

GO:0009617 "response to bacterium" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0010043 "response to zinc ion" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0010260 "organ senescence" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q41558	HBP1C_WHEAT	No assigned EC number	0.7960	0.9888	0.7436	N/A	no
O24160	TGA21_TOBAC	No assigned EC number	0.8125	0.9581	0.7521	N/A	no
P23923	HBP1B_WHEAT	No assigned EC number	0.8078	0.9245	0.9969	N/A	no
Q39140	TGA6_ARATH	No assigned EC number	0.7537	0.9189	0.9969	yes	no
P43273	TGA2_ARATH	No assigned EC number	0.7590	0.9217	1.0	no	no
Q39163	TGA5_ARATH	No assigned EC number	0.7147	0.9189	0.9969	no	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	358
pfam14144	79	pfam14144, DOG1, Seed dormancy control	2e-41
smart00338	65	smart00338, BRLZ, basic region leucin zipper	9e-09
pfam00170	64	pfam00170, bZIP_1, bZIP transcription factor	4e-06
pfam07716	54	pfam07716, bZIP_2, Basic region leucine zipper	1e-04
cd12193	54	cd12193, B_zip1, basic leucine zipper DNA-binding	0.002

>gnl|CDD|206313 pfam14144, DOG1, Seed dormancy control

 Score =  139 bits (352), Expect = 2e-41
 Identities = 56/79 (70%), Positives = 67/79 (84%)

Query: 154 RHIVELRAAVNSHAGDTELRTIVDNVTSHFDEIFRLKGIASKADVFHILSGMWKTPAERC 213
           R + ELRAA+N+HA D ELR++VD V +H+DE FRLK  A+KADVFH+LSGMWKTPAERC
Sbjct: 1   RLLAELRAALNAHASDDELRSLVDKVLAHYDEYFRLKSAAAKADVFHLLSGMWKTPAERC 60

Query: 214 FMWIGGFRSSELLKLLVNQ 232
           F+WIGGFR SELLKLL + 
Sbjct: 61  FLWIGGFRPSELLKLLYSL 79

This family of plant proteins appears to be a highly specific controller seed dormancy. Length = 79

>gnl|CDD|197664 smart00338, BRLZ, basic region leucin zipper

 Score = 51.0 bits (123), Expect = 9e-09
 Identities = 20/45 (44%), Positives = 30/45 (66%)

Query: 71  DQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQR 115
           D+K  RR  +NREAAR+SR RKKA +++LE    +L    + L++
Sbjct: 3   DEKRRRRRERNREAARRSRERKKAEIEELERKVEQLEAENERLKK 47

Length = 65

>gnl|CDD|201054 pfam00170, bZIP_1, bZIP transcription factor

 Score = 43.5 bits (103), Expect = 4e-06
 Identities = 19/28 (67%), Positives = 24/28 (85%)

Query: 73  KTLRRLAQNREAARKSRLRKKAYVQQLE 100
           K  RR  +NREAAR+SRLRKKAY+++LE
Sbjct: 5   KRERRRQKNREAARRSRLRKKAYIEELE 32

The Pfam entry includes the basic region and the leucine zipper region. Length = 64

>gnl|CDD|203738 pfam07716, bZIP_2, Basic region leucine zipper

 Score = 39.1 bits (92), Expect = 1e-04
 Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 4/49 (8%)

Query: 71  DQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQ 119
           D+   RR  +N EAAR+SR +KK   ++LE    ++ +LE+E  + RQ+
Sbjct: 3   DEYRDRRR-RNNEAARRSREKKKQREEELEE---RVKELEEENAQLRQK 47

Length = 54

>gnl|CDD|213400 cd12193, B_zip1, basic leucine zipper DNA-binding and multimerization region of GCN4 and related proteins

 Score = 35.7 bits (83), Expect = 0.002
 Identities = 18/43 (41%), Positives = 26/43 (60%)

Query: 73  KTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQR 115
              R+ A+NREAAR+SR RK   ++QLE    +LT    +L+ 
Sbjct: 2   PRARKRARNREAARRSRARKMERMKQLEDKVEELTSENSDLED 44

Basic leucine zipper (bZIP) transcription factors act in networks of homo- and hetero-dimers in the regulation in a diverse set of cellular pathways. Classical leucine zippers have alpha helices with leucine residues 7 amino acids apart, which stabilize dimerization with a parallel leucine zipper domain. Dimerization creates a pair of basic regions that bind DNA and undergo conformational change. GCN4 was identified in Saccharomyces cerevisiae from mutations in a deficiency in activation with the general amino acid control pathway. GCN4 encodes a trans-activator of amino acid biosynthetic genes containing 2 acidic activation domains and a C-terminal bZIP domain, comprised of a basic alpha-helical DNA-binding region and a coiled-coil dimerization region. Length = 54

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	358
PF14144	80	DOG1: Seed dormancy control	100.0
smart00338	65	BRLZ basic region leucin zipper.	98.51
PF00170	64	bZIP_1: bZIP transcription factor cAMP response el	98.29
PF07716	54	bZIP_2: Basic region leucine zipper; InterPro: IPR	98.29
KOG3584	348	consensus cAMP response element binding protein an	97.28
PF13801	125	Metal_resist: Heavy-metal resistance; PDB: 3EPV_C	96.74
PRK12750	170	cpxP periplasmic repressor CpxP; Reviewed	95.9
PF03131	92	bZIP_Maf: bZIP Maf transcription factor; InterPro:	95.82
COG3678	160	CpxP P pilus assembly/Cpx signaling pathway, perip	95.56
KOG0709	472	consensus CREB/ATF family transcription factor [Tr	93.87
KOG4343	655	consensus bZIP transcription factor ATF6 [Transcri	92.6
KOG0837	279	consensus Transcriptional activator of the JUN fam	91.04
PRK12751	162	cpxP periplasmic stress adaptor protein CpxP; Revi	90.61
PRK10455	161	periplasmic protein; Reviewed	90.5
PRK10363	166	cpxP periplasmic repressor CpxP; Reviewed	89.74
PF07813	100	LTXXQ: LTXXQ motif family protein; InterPro: IPR01	86.54

>PF14144 DOG1: Seed dormancy control

Probab=100.00  E-value=6.3e-35  Score=234.13  Aligned_cols=79  Identities=63%  Similarity=1.088  Sum_probs=76.7

Q ss_pred             HHHHHHHHHhhcCC-CCchHHHHHHHHHHhHHHHHHHHhhhhhhchhhhhcCCCCchhhhhhhhhcCCCchHHHHHHHhh
Q 018284          154 RHIVELRAAVNSHA-GDTELRTIVDNVTSHFDEIFRLKGIASKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVNQ  232 (358)
Q Consensus       154 r~l~eLR~AL~s~~-~D~eLr~LVd~~l~HY~eyfr~Ks~aAk~DVf~llsg~W~Tp~ER~FLWiGGfRPS~llkLL~~~  232 (358)
                      |+++|||+|+++|. +|++|+.||++||+||++||++|+.||++|||++|+|+|+||+|||||||||||||++|+||+++
T Consensus         1 ~~l~eLr~al~~~~~~~~~L~~lV~~~~~Hy~~y~~~K~~aa~~DV~~~~s~~W~sp~Er~flWiGG~RPS~~~~ll~s~   80 (80)
T PF14144_consen    1 RQLNELRAALQSHADSDDELRSLVDKVMSHYDEYYRAKSAAAKADVFHLLSPPWKSPLERCFLWIGGWRPSELFKLLYSQ   80 (80)
T ss_pred             CcHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHhCCCCCCHHHHHHHHHhcCCHHHHHHHHhcC
Confidence            57899999999998 89999999999999999999999999999999999999999999999999999999999999875

>smart00338 BRLZ basic region leucin zipper

Probab=98.51  E-value=2.7e-07  Score=70.71  Aligned_cols=45  Identities=44%  Similarity=0.552  Sum_probs=37.5

Q ss_pred             CCHHHHHHHHhhHHHHHHhhhhHHHHHHHHHhhHhHHhhHHHHHH
Q 018284           70 GDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQ  114 (358)
Q Consensus        70 ~~~k~~rrlaqnreaarksrlrkkayvqqle~sr~kl~qleqel~  114 (358)
                      .|+|-.||+.+||+||++||.|||.|++.||..-..|.....+|.
T Consensus         2 ~~~k~~rR~~rNR~aA~~~R~rKk~~~~~Le~~~~~L~~en~~L~   46 (65)
T smart00338        2 EDEKRRRRRERNREAARRSRERKKAEIEELERKVEQLEAENERLK   46 (65)
T ss_pred             ccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            378999999999999999999999999999988655555444444

>PF00170 bZIP_1: bZIP transcription factor cAMP response element binding (CREB) protein signature fos transforming protein signature jun transcription factor signature; InterPro: IPR011616 The basic-leucine zipper (bZIP) transcription factors [, ] of eukaryotic are proteins that contain a basic region mediating sequence-specific DNA-binding followed by a leucine zipper region (see IPR002158 from INTERPRO) required for dimerization

Probab=98.29  E-value=1.4e-06  Score=66.58  Aligned_cols=39  Identities=51%  Similarity=0.769  Sum_probs=32.0

Q ss_pred             CHHHHHHHHhhHHHHHHhhhhHHHHHHHHHhhHhHHhhHHHH
Q 018284           71 DQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQE  112 (358)
Q Consensus        71 ~~k~~rrlaqnreaarksrlrkkayvqqle~sr~kl~qleqe  112 (358)
                      ..|-.+|..+||+|||+||.|||.|+++||..   +..|+.+
T Consensus         3 ~~k~~~rr~rNR~AAr~~R~RKk~~~~~Le~~---~~~L~~e   41 (64)
T PF00170_consen    3 EDKRERRRERNREAARRSRQRKKQYIEELEEK---VEELESE   41 (64)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH---HHHHHHH
Confidence            35678999999999999999999999999998   4444444

; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0046983 protein dimerization activity, 0006355 regulation of transcription, DNA-dependent; PDB: 2H7H_B 2OQQ_B 1S9K_E 1JNM_A 1JUN_A 1FOS_H 1A02_J 1T2K_C 1CI6_A 1DH3_C ....

>PF07716 bZIP_2: Basic region leucine zipper; InterPro: IPR011700 The basic-leucine zipper (bZIP) transcription factors [, ] of eukaryotes are proteins that contain a basic region mediating sequence-specific DNA-binding, followed by a leucine zipper region (see IPR002158 from INTERPRO), which is required for dimerization

Probab=98.29  E-value=1.7e-06  Score=64.36  Aligned_cols=40  Identities=48%  Similarity=0.634  Sum_probs=34.0

Q ss_pred             CHHHHHHHHhhHHHHHHhhhhHHHHHHHHHhhHhHHhhHHHHHH
Q 018284           71 DQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQ  114 (358)
Q Consensus        71 ~~k~~rrlaqnreaarksrlrkkayvqqle~sr~kl~qleqel~  114 (358)
                      |++..||. .||+||++||-|||.|++.||..   +.+|+.+..
T Consensus         3 ~~~~~rR~-rNr~AA~r~R~rkk~~~~~le~~---~~~L~~en~   42 (54)
T PF07716_consen    3 EEKRERRE-RNREAARRSRQRKKQREEELEQE---VQELEEENE   42 (54)
T ss_dssp             HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHH
T ss_pred             HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHH
Confidence            67889999 99999999999999999999998   445555444

; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0046983 protein dimerization activity, 0006355 regulation of transcription, DNA-dependent; PDB: 1NWQ_A 1H89_B 1H88_A 1GTW_B 2E43_A 1IO4_A 1GU4_B 2E42_A 1H8A_B 1GU5_B ....

>KOG3584 consensus cAMP response element binding protein and related transcription factors [Transcription]

Probab=97.28  E-value=0.00027  Score=69.37  Aligned_cols=32  Identities=50%  Similarity=0.629  Sum_probs=28.6

Q ss_pred             HHHHHHHHhhHHHHHHhhhhHHHHHHHHHhhH
Q 018284           72 QKTLRRLAQNREAARKSRLRKKAYVQQLESSR  103 (358)
Q Consensus        72 ~k~~rrlaqnreaarksrlrkkayvqqle~sr  103 (358)
                      -|-.=||-.||||||.+|-.||-||..||+..
T Consensus       290 rKRevRLmKNREAARECRRKKKEYVKCLENRV  321 (348)
T KOG3584|consen  290 RKREVRLMKNREAARECRRKKKEYVKCLENRV  321 (348)
T ss_pred             hHHHHHHHhhHHHHHHHHHhHhHHHHHHHhHH
Confidence            35556899999999999999999999999984

>PF13801 Metal_resist: Heavy-metal resistance; PDB: 3EPV_C 2Y3D_A 2Y3H_D 2Y3G_B 2Y3B_A 2Y39_A 3LAY_H

Probab=96.74  E-value=0.046  Score=44.28  Aligned_cols=85  Identities=25%  Similarity=0.252  Sum_probs=65.5

Q ss_pred             CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhCCCCCCCCCCCchhchhhHHHHHHHhHHHHHHHHHHHhH
Q 018284          234 EPLTEQQLVGIYNLQQSSQQAEDALSQGMDALQQSLAETLANGSPSPSGTSGNVANYMGQMAMAMGKLGTLEGFLRQADN  313 (358)
Q Consensus       234 epLTeqQl~~I~~Lqqst~qaEdaLsq~m~~LQqslad~la~~~~~~~g~~~~v~~~~~qm~~Am~kl~~Le~fl~qAD~  313 (358)
                      -+||++|...|..+.......-..+-+.+......+...+....+.           ...+.   ..++.+...-.+...
T Consensus        40 l~Lt~eQ~~~l~~~~~~~~~~~~~~r~~~~~~r~~l~~ll~~~~~D-----------~~~i~---a~~~~~~~~~~~l~~  105 (125)
T PF13801_consen   40 LNLTPEQQAKLRALMDEFRQEMRALRQELRAARQELRALLAAPPPD-----------EAAIE---ALLEEIREAQAELRQ  105 (125)
T ss_dssp             S-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSSS------------HHHHH---HHHHHHHHHHHHHHH
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCC-----------HHHHH---HHHHHHHHHHHHHHH
Confidence            4799999999999999999999999999999999999888643221           12222   333455566667778


Q ss_pred             HHHHHHHHHHHhcCHHHHH
Q 018284          314 LRQQTLQQMHRILTTRQSA  332 (358)
Q Consensus       314 LR~qTL~~~~~ILTp~QAA  332 (358)
                      .|.+++.++..+|||.|=+
T Consensus       106 ~~~~~~~~~~~~LtpeQR~  124 (125)
T PF13801_consen  106 ERLEHLLEIRAVLTPEQRA  124 (125)
T ss_dssp             HHHHHHHHHHHTT-GGGHH
T ss_pred             HHHHHHHHHHHcCCHHHhC
Confidence            9999999999999999865

>PRK12750 cpxP periplasmic repressor CpxP; Reviewed

Probab=95.90  E-value=0.36  Score=44.12  Aligned_cols=96  Identities=18%  Similarity=0.122  Sum_probs=58.6

Q ss_pred             HhhcCCChHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHhhhhhCCCCCCCCCCCchhchhhHHHHHHHhH
Q 018284          230 VNQLEPLTEQQLVGIYNLQQSSQQAEDA--------LSQGMDALQQSLAETLANGSPSPSGTSGNVANYMGQMAMAMGKL  301 (358)
Q Consensus       230 ~~~LepLTeqQl~~I~~Lqqst~qaEda--------Lsq~m~~LQqslad~la~~~~~~~g~~~~v~~~~~qm~~Am~kl  301 (358)
                      ...| +||++|...|..++...+.+=.+        ....|....+.+.+.+.+++..+               .|+..+
T Consensus        48 ~~~L-~LTdeQk~qik~i~~~~r~~~k~~~~~~r~~~~~~m~a~~~~~~~Ll~a~~FDe---------------aavral  111 (170)
T PRK12750         48 MRQL-DLTDAQKEQLKEMREANRAEMKAKYSGNREQSHAEMKAHHAKVQALVLADDFDE---------------AAANDL  111 (170)
T ss_pred             HhhC-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHhcCCCCH---------------HHHHHH
Confidence            3456 79999999998888776664333        45556666667777775432221               111111


Q ss_pred             -HHHHHHHHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 018284          302 -GTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDY  341 (358)
Q Consensus       302 -~~Le~fl~qAD~LR~qTL~~~~~ILTp~QAA~fLlA~~ey  341 (358)
                       +.+..--.+.---|.++.++++.||||-|=+.|---..+.
T Consensus       112 ~~~~~~~~~e~~v~~~~~~~~~~~vLTpEQRak~~e~~~~r  152 (170)
T PRK12750        112 AKQMVEKQVERRVKMLEKRHQMLSILTPEQKAKFQELQQER  152 (170)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence             1111111112223667889999999999999988765554

>PF03131 bZIP_Maf: bZIP Maf transcription factor; InterPro: IPR004826 There are several different types of Maf transcription factors with different roles in the cell

Probab=95.82  E-value=0.009  Score=49.02  Aligned_cols=33  Identities=33%  Similarity=0.334  Sum_probs=30.0

Q ss_pred             HHHHHHHHhhHHHHHHhhhhHHHHHHHHHhhHh
Q 018284           72 QKTLRRLAQNREAARKSRLRKKAYVQQLESSRL  104 (358)
Q Consensus        72 ~k~~rrlaqnreaarksrlrkkayvqqle~sr~  104 (358)
                      =|-.||...||.||++||.||+.++..||....
T Consensus        29 lK~~RRr~KNR~~A~~cR~rk~~~~~~Le~e~~   61 (92)
T PF03131_consen   29 LKQRRRRLKNRGYAQNCRKRKLDQIEELEEEIE   61 (92)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            377899999999999999999999999998753

MafG and MafH are small Mafs which lack a putative transactivation domain. They behave as transcriptional repressors when they dimerize among themselves. However they also serve as transcriptional activators by dimerizing with other (usually larger) basic-zipper proteins and recruiting them to specific DNA-binding sites. Maf transcription factors contain a conserved basic region leucine zipper (bZIP) domain, which mediates their dimerization and DNA binding property. Neural retina-specific leucine zipper proteins also belong to this family. Together with the basic region, the Maf extended homology region (EHR), conserved only within the Maf family, defines the DNA binding specific to Mafs. This structure enables Mafs to make a broader area of contact with DNA and to recognise longer DNA sequences. In particular, the two residues at the beginning of helix H2 are positioned to recognise the flanking region []. Small Maf proteins heterodimerize with Fos and may act as competitive repressors of the NF2-E2 transcription factor. In mouse, Maf1 may play an early role in axial patterning. Defects in these proteins are a cause of autosomal dominant retinitis pigmentosa. ; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 2KZ5_A 3A5T_A 1K1V_A 1SKN_P 2WT7_B 2WTY_B.

>COG3678 CpxP P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein [Intracellular trafficking and secretion / Cell motility and secretio / Signal transduction mechanisms / Inorganic ion transport and metabolism]

Probab=95.56  E-value=0.21  Score=45.38  Aligned_cols=107  Identities=22%  Similarity=0.202  Sum_probs=69.8

Q ss_pred             hhhcCCCchHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhCCCCCCCCCCCchhchhhHH
Q 018284          215 MWIGGFRSSELLKLLVNQLEPLTEQQLVGIYNLQQSSQQAEDALSQGMDALQQSLAETLANGSPSPSGTSGNVANYMGQM  294 (358)
Q Consensus       215 LWiGGfRPS~llkLL~~~LepLTeqQl~~I~~Lqqst~qaEdaLsq~m~~LQqslad~la~~~~~~~g~~~~v~~~~~qm  294 (358)
                      +|.|+|-|=-.= .....| +||+.|..+|..+...-+   .++.+-+..-...+-+.+.++...+              
T Consensus        39 ~~~g~~~~~~~~-~~~~~l-~lT~~Qrqqi~~i~~~~~---~a~~~~~~~~r~~l~~li~a~~~D~--------------   99 (160)
T COG3678          39 HHGGQFGPRHQG-GMFKGL-DLTRAQRQQIRDLMQAQR---RAQREQLRSKRRALHELIAADQFDE--------------   99 (160)
T ss_pred             ccCCCCCccccc-cccccc-cccHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHhcCCcCH--------------
Confidence            577777665320 011233 799999999988877665   4444444444455555554322211              


Q ss_pred             HHHHHhHHHHHHHHHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 018284          295 AMAMGKLGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAIND  340 (358)
Q Consensus       295 ~~Am~kl~~Le~fl~qAD~LR~qTL~~~~~ILTp~QAA~fLlA~~e  340 (358)
                      +.|=...+.++....+.+.+|.++-.+|..||||.|.+.|=--.++
T Consensus       100 aka~a~~~~m~~~~~~~~~~r~k~~~~m~~vLTPEQr~~l~~~~~~  145 (160)
T COG3678         100 AKARAQAEKMENQRQALRELRVKSDNQMYQVLTPEQRAKLQELLAQ  145 (160)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence            1222555778888899999999999999999999999776544433

>KOG0709 consensus CREB/ATF family transcription factor [Transcription]

Probab=93.87  E-value=0.058  Score=56.17  Aligned_cols=43  Identities=42%  Similarity=0.572  Sum_probs=34.6

Q ss_pred             HHHHHHHhhHHHHHHhhhhHHHHHHHHHhhHhHHhhHHHHHHH
Q 018284           73 KTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQR  115 (358)
Q Consensus        73 k~~rrlaqnreaarksrlrkkayvqqle~sr~kl~qleqel~~  115 (358)
                      |-.||...|-+-|--||-|||-||..||+.-..-+-=+|||++
T Consensus       251 KrvRRKIrNK~SAQESRrkKkeYid~LE~rv~~~taeNqeL~k  293 (472)
T KOG0709|consen  251 KRVRRKIRNKRSAQESRRKKKEYIDGLESRVSAFTAENQELQK  293 (472)
T ss_pred             HHHHHHHHhhhhhHHHHHhHhhHHHHHhhhhhhcccCcHHHHH
Confidence            5569999999999999999999999999985544444455544

>KOG4343 consensus bZIP transcription factor ATF6 [Transcription]

Probab=92.60  E-value=0.2  Score=53.18  Aligned_cols=42  Identities=43%  Similarity=0.570  Sum_probs=34.6

Q ss_pred             CCHHHH---HHHHhhHHHHHHhhhhHHHHHHHHHhhHhHHhhHHHHHH
Q 018284           70 GDQKTL---RRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQ  114 (358)
Q Consensus        70 ~~~k~~---rrlaqnreaarksrlrkkayvqqle~sr~kl~qleqel~  114 (358)
                      .|+|++   -|...|||-|--||.|||-|++-||..   |.-|++|=+
T Consensus       275 ~d~kv~krqQRmIKNResA~~SRkKKKEy~~~Le~r---Lq~ll~Ene  319 (655)
T KOG4343|consen  275 SDIKVLKRQQRMIKNRESACQSRKKKKEYMLGLEAR---LQALLSENE  319 (655)
T ss_pred             cCHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHH
Confidence            477775   478999999999999999999999987   555565544

>KOG0837 consensus Transcriptional activator of the JUN family [Transcription]

Probab=91.04  E-value=0.44  Score=46.64  Aligned_cols=30  Identities=43%  Similarity=0.489  Sum_probs=24.1

Q ss_pred             HHHHHHHhhHHHHHHhhhhHHHHHHHHHhh
Q 018284           73 KTLRRLAQNREAARKSRLRKKAYVQQLESS  102 (358)
Q Consensus        73 k~~rrlaqnreaarksrlrkkayvqqle~s  102 (358)
                      |..|.=+.|||||+|||.||---|.+||.-
T Consensus       206 kleRkrlrnreaa~Kcr~rkLdrisrLEdk  235 (279)
T KOG0837|consen  206 KLERKRLRNREAASKCRKRKLDRISRLEDK  235 (279)
T ss_pred             HHHHHHhhhHHHHHHHHHHHHHHHHHHHhh
Confidence            455667889999999999998777777654

>PRK12751 cpxP periplasmic stress adaptor protein CpxP; Reviewed

Probab=90.61  E-value=6.9  Score=35.73  Aligned_cols=103  Identities=16%  Similarity=0.163  Sum_probs=62.2

Q ss_pred             hhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhCCCCCCCCCCCchhchhhHHHHHHHhHHHHHHHHHH
Q 018284          231 NQLEPLTEQQLVGIYNLQQSSQQAEDALSQGMDALQQSLAETLANGSPSPSGTSGNVANYMGQMAMAMGKLGTLEGFLRQ  310 (358)
Q Consensus       231 ~~LepLTeqQl~~I~~Lqqst~qaEdaLsq~m~~LQqslad~la~~~~~~~g~~~~v~~~~~qm~~Am~kl~~Le~fl~q  310 (358)
                      ..| +||++|...|-.+....+.......  .+ .-+.+-+.+.+++..+           ..+...+++..   ..-..
T Consensus        53 ~~l-~LTd~QR~qmr~im~~~r~~~~~~~--~~-~~~~m~~Li~Ad~FDe-----------aAvra~~~kma---~~~~e  114 (162)
T PRK12751         53 DGI-NLTEQQRQQMRDLMRQSHQSQPRLD--LE-DREAMHKLITADKFDE-----------AAVRAQAEKMS---QNQIE  114 (162)
T ss_pred             ccC-CCCHHHHHHHHHHHHHhhhcccchh--HH-HHHHHHHHHhcCCCCH-----------HHHHHHHHHHH---HHHHH
Confidence            344 7999999999888877766432111  11 2223344444332211           11222223322   22222


Q ss_pred             HhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhccc
Q 018284          311 ADNLRQQTLQQMHRILTTRQSARALLAINDYFSRLRALSSL  351 (358)
Q Consensus       311 AD~LR~qTL~~~~~ILTp~QAA~fLlA~~ey~~rLRaLssl  351 (358)
                      ---.+.++.++++.+|||-|-+.|=--.-+....+|.++.+
T Consensus       115 ~~v~~~~~~~qmy~lLTPEQra~l~~~~e~r~~~~~~~~~~  155 (162)
T PRK12751        115 RHVEMAKVRNQMYNLLTPEQKEALNKKHQERIEKLQQKPAA  155 (162)
T ss_pred             HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcccc
Confidence            22357788899999999999999998888888888886643

>PRK10455 periplasmic protein; Reviewed

Probab=90.50  E-value=3.3  Score=37.65  Aligned_cols=102  Identities=14%  Similarity=0.150  Sum_probs=56.7

Q ss_pred             hhhhhhcC---CCchHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhhhCCCCCCCCCCCch
Q 018284          212 RCFMWIGG---FRSSELLKLLVNQLEPLTEQQLVGIYNLQQSSQQAEDALS-QGMDALQQSLAETLANGSPSPSGTSGNV  287 (358)
Q Consensus       212 R~FLWiGG---fRPS~llkLL~~~LepLTeqQl~~I~~Lqqst~qaEdaLs-q~m~~LQqslad~la~~~~~~~g~~~~v  287 (358)
                      .+.+|-||   ..+..+    ...| +||++|...|..+.+..+..-...+ +..+.++    +.+.++..       + 
T Consensus        35 ~~~~~~~~~~g~~~~~m----~~~L-~LT~~Qrqqir~im~~~r~~~~~~~~~~r~~l~----~li~ad~F-------D-   97 (161)
T PRK10455         35 KPMMHHKGKFGPHHDMM----FKGL-NLTDAQKQQIRDIMKAQRDQMKRPPLEERRAMH----DIIASDTF-------D-   97 (161)
T ss_pred             CccccCCCCCCchhhhh----hhhC-CCCHHHHHHHHHHHHHHHHhhccccHHHHHHHH----HHHccCcc-------C-
Confidence            44577653   334433    3455 7999999999988777665532222 2333333    22332211       1 


Q ss_pred             hchhhHHHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHhcCHHHHHHHHH
Q 018284          288 ANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALL  336 (358)
Q Consensus       288 ~~~~~qm~~Am~kl~~Le~fl~qAD~LR~qTL~~~~~ILTp~QAA~fLl  336 (358)
                         ...+...++++.   ..-.+.--.|.++-.+|..||||-|=+.|=-
T Consensus        98 ---eaavra~~~k~~---~~~~~~~~~~~~~~~qiy~vLTPEQr~q~~~  140 (161)
T PRK10455         98 ---KAKAEAQITKME---AQRKARMLAHMETQNKIYNVLTPEQKKQFNA  140 (161)
T ss_pred             ---HHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence               111222223332   2222333368888999999999999998753

>PRK10363 cpxP periplasmic repressor CpxP; Reviewed

Probab=89.74  E-value=6.8  Score=36.11  Aligned_cols=99  Identities=17%  Similarity=0.220  Sum_probs=59.1

Q ss_pred             hcCCChHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhhhCCCCCCCCCCCchhchhhHHHHHHHhHH--HHHHHH
Q 018284          232 QLEPLTEQQLVGIYNLQQSSQQAEDALS-QGMDALQQSLAETLANGSPSPSGTSGNVANYMGQMAMAMGKLG--TLEGFL  308 (358)
Q Consensus       232 ~LepLTeqQl~~I~~Lqqst~qaEdaLs-q~m~~LQqslad~la~~~~~~~g~~~~v~~~~~qm~~Am~kl~--~Le~fl  308 (358)
                      .| +||++|...|..|.+.-+.+...++ .++++++    +.+.++..       +    ...+....+|+.  ..+.-|
T Consensus        48 gL-dLTdaQRqQmRdLm~~~r~~~~~~~~~er~amh----~LI~ad~F-------D----Eaavra~a~kma~~~~e~~V  111 (166)
T PRK10363         48 GI-SLTEHQRQQMRDLMQQARHEQPPVNVSEMETMH----RLVTAENF-------D----ENAVRAQAEKMAQEQVARQV  111 (166)
T ss_pred             CC-CCCHHHHHHHHHHHHHHHhcccccCHHHHHHHH----HHHhcCCC-------C----HHHHHHHHHHHHHHHHHHHH
Confidence            44 7999999999999988776644443 2444444    33332211       1    111122223332  122222


Q ss_pred             HHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhccc
Q 018284          309 RQADNLRQQTLQQMHRILTTRQSARALLAINDYFSRLRALSSL  351 (358)
Q Consensus       309 ~qAD~LR~qTL~~~~~ILTp~QAA~fLlA~~ey~~rLRaLssl  351 (358)
                           -|.++-++|..||||-|-+.|=--.-+....+|.++.+
T Consensus       112 -----em~k~~nqmy~lLTPEQKaq~~~~~~~rm~~~~~~~~~  149 (166)
T PRK10363        112 -----EMAKVRNQMYRLLTPEQQAVLNEKHQQRMEQLRDVTQW  149 (166)
T ss_pred             -----HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence                 36677889999999999999966555556666666543

>PF07813 LTXXQ: LTXXQ motif family protein; InterPro: IPR012899 This five residue motif is found in a number of bacterial proteins bearing similarity to the protein CpxP (P32158 from SWISSPROT)

Probab=86.54  E-value=4  Score=32.32  Aligned_cols=82  Identities=16%  Similarity=0.223  Sum_probs=44.1

Q ss_pred             hcCCChHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHhhhhhCCCCCCCCCCCchhchhhHHHHHHHhHHHHHHHH
Q 018284          232 QLEPLTEQQLVGIYNLQQSSQQAEDAL---SQGMDALQQSLAETLANGSPSPSGTSGNVANYMGQMAMAMGKLGTLEGFL  308 (358)
Q Consensus       232 ~LepLTeqQl~~I~~Lqqst~qaEdaL---sq~m~~LQqslad~la~~~~~~~g~~~~v~~~~~qm~~Am~kl~~Le~fl  308 (358)
                      .| +||++|...|..+....+..-..+   .+.+.++..   +..            +. +...    ++.+.+.+...-
T Consensus        12 ~L-~LT~eQ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~---~~~------------~~-~~~~----~~~~~~~~~~~~   70 (100)
T PF07813_consen   12 EL-NLTDEQKAKWRAIRQAMKAKMKPLKAMREQLRALRD---PSF------------DE-AAPE----ALAAMAEMMELR   70 (100)
T ss_dssp             TS---THHHHHHHHHHHHHHCTTS------HHHHHHHHH---SS--------------H-HHHH----HHH--HHCHHHH
T ss_pred             hC-CCCHHHHHHHHHHHHHHHHHHHhhcccHHHHHHhcc---ccC------------Ch-hHHH----HHHHHHHHHHHH
Confidence            44 699999999999988877766666   222222222   000            00 0011    112223334444


Q ss_pred             HHHhHHHHHHHHHHHHhcCHHHHHHH
Q 018284          309 RQADNLRQQTLQQMHRILTTRQSARA  334 (358)
Q Consensus       309 ~qAD~LR~qTL~~~~~ILTp~QAA~f  334 (358)
                      .+.-..|..+...+..||||-|=+.|
T Consensus        71 ~~~~~~~~~~~~~~~~vLt~eQk~~~   96 (100)
T PF07813_consen   71 AEMMEERAKAQHALYAVLTPEQKEKF   96 (100)
T ss_dssp             HHHHHHHHHHHHHHHTTS-HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence            45555678889999999999998776

This is a periplasmic protein that aids in combating extracytoplasmic protein-mediated toxicity, and may also be involved in the response to alkaline pH []. Another member of this family, Spy (P77754 from SWISSPROT) is also a periplasmic protein that may be involved in the response to stress []. The homology between CpxP and Spy may indicate that these two proteins are functionally related []. The motif is found repeated twice in many members of this entry. ; GO: 0042597 periplasmic space; PDB: 3ITF_B 3QZC_B 3OEO_D 3O39_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	358
1dh3_A	55	Transcription factor CREB; protein-DNA complex, tr	4e-07
1t2k_D	61	Cyclic-AMP-dependent transcription factor ATF-2; p	5e-07
1jnm_A	62	Proto-oncogene C-JUN; BZIP, protein-DNA complex, t	1e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-06
1ci6_A	63	Transcription factor ATF-4; BZIP; 2.60A {Homo sapi	2e-05
2wt7_A	63	Proto-oncogene protein C-FOS; transcription, trans	3e-05
2dgc_A	63	Protein (GCN4); basic domain, leucine zipper, DNA	5e-05
3a5t_A	107	Transcription factor MAFG; protein-DNA complex, BZ	3e-04
2wt7_B	90	Transcription factor MAFB; transcription, transcri	3e-04

>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1 Length = 55

 Score = 45.5 bits (108), Expect = 4e-07
 Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 3/47 (6%)

Query: 73  KTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQ 119
           K   RL +NREAAR+SR +KK YV+ LE+   ++  LE + +   ++
Sbjct: 1   KREVRLMKNREAARESRRKKKEYVKSLEN---RVAVLENQNKTLIEE 44

>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1 Length = 61

 Score = 45.4 bits (108), Expect = 5e-07
 Identities = 17/47 (36%), Positives = 25/47 (53%)

Query: 73  KTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQ 119
           K  + L +NR AA +SR ++K +VQ LE     L+ L  +LQ     
Sbjct: 1   KRRKFLERNRAAASRSRQKRKVWVQSLEKKAEDLSSLNGQLQSEVTL 47

>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A Length = 62

 Score = 44.3 bits (105), Expect = 1e-06
 Identities = 16/47 (34%), Positives = 20/47 (42%)

Query: 73  KTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQ 119
           K  R+  +NR AA KSR RK   + +LE     L     EL      
Sbjct: 1   KAERKRMRNRIAASKSRKRKLERIARLEEKVKTLKAQNSELASTANM 47

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 48.7 bits (115), Expect = 2e-06
 Identities = 54/445 (12%), Positives = 105/445 (23%), Gaps = 191/445 (42%)

Query: 33  ITDTSTDDTEDKNQRFERGQLTAVAASDSSDKSKEKSGDQKTLR---------------- 76
           + +    D +D      +  L+     +       K     TLR                
Sbjct: 30  VDNFDCKDVQD----MPKSILSK---EEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKF 82

Query: 77  ---RLAQN--------REAARKSRLRKKAYVQQLES-------------SRLKL-TQLEQ 111
               L  N        +   R+  +  + Y++Q +              SRL+   +L Q
Sbjct: 83  VEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQ 142

Query: 112 ELQRAR-QQGIFISSSGDQSHSMSGNGAAAFDVEYSRWLEEHNRHIVELRAAVNSHAGDT 170
            L   R  + + I         + G+G          W+                 A D 
Sbjct: 143 ALLELRPAKNVLI-------DGVLGSGKT--------WV-----------------ALDV 170

Query: 171 ELRTIVDNVTSHFD-EIFRLKGIASKADVFHILSGMWKTPAERCFMWIGGFRSSEL---- 225
              +    V    D +IF                  W          +    S E     
Sbjct: 171 -CLS--YKVQCKMDFKIF------------------WLN--------LKNCNSPETVLEM 201

Query: 226 LKLLVNQLEPLTEQQLVGIYNLQQSSQQAEDALS------QGMDAL-------------- 265
           L+ L+ Q++P    +     N++      +  L          + L              
Sbjct: 202 LQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNA 261

Query: 266 ------------QQSLAETLANGSP------------SPSGTSGNVANYMGQ-------- 293
                        + + + L+  +             +P      +  Y+          
Sbjct: 262 FNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPRE 321

Query: 294 ------MAMAM-GKLGTLEGFLRQADNLRQQTLQQMHRILTTRQSARAL--LAINDYFSR 344
                   +++  +   +   L   DN +     ++  I+    S   L        F R
Sbjct: 322 VLTTNPRRLSIIAES--IRDGLATWDNWKHVNCDKLTTII--ESSLNVLEPAEYRKMFDR 377

Query: 345 L-----------RALSSLWLARPRE 358
           L             LS +W    + 
Sbjct: 378 LSVFPPSAHIPTILLSLIWFDVIKS 402

>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1 Length = 63

 Score = 40.8 bits (96), Expect = 2e-05
 Identities = 12/43 (27%), Positives = 24/43 (55%)

Query: 73  KTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQR 115
           K L+++ QN+ AA + R +K+A  + L     +L +  + L+ 
Sbjct: 2   KKLKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKE 44

>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D Length = 63

 Score = 40.5 bits (95), Expect = 3e-05
 Identities = 12/48 (25%), Positives = 21/48 (43%)

Query: 72  QKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQ 119
           +K   R  +N+ AA K R R++     L++   +L   +  LQ     
Sbjct: 1   EKRRIRRERNKMAAAKCRNRRRELTDTLQAETDQLEDEKSALQTEIAN 48

>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D Length = 63

 Score = 39.8 bits (93), Expect = 5e-05
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 4/53 (7%)

Query: 67  EKSGDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQ 119
            +S D   L+R A+N EAAR+SR RK   ++QLE    K+ +L  +      +
Sbjct: 4   PESSDPAALKR-ARNTEAARRSRARKLQRMKQLED---KVEELLSKNYHLENE 52

>3a5t_A Transcription factor MAFG; protein-DNA complex, BZIP factor, acetylation, DNA-binding, isopeptide bond, nucleus; 2.80A {Mus musculus} Length = 107

 Score = 38.9 bits (90), Expect = 3e-04
 Identities = 15/55 (27%), Positives = 26/55 (47%)

Query: 65  SKEKSGDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQ 119
           SKE+    K  RR  +NR  A   R+++    ++LE  + +L Q  ++L      
Sbjct: 29  SKEEIIQLKQRRRTLKNRGYAASCRVKRVTQKEELEKQKAELQQEVEKLASENAS 83

>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A Length = 90

 Score = 38.4 bits (89), Expect = 3e-04
 Identities = 13/55 (23%), Positives = 28/55 (50%)

Query: 65  SKEKSGDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQ 119
           +K++    K  RR  +NR  A+  R ++      LE+ + +L Q  ++L++   +
Sbjct: 19  TKDEVIRLKQKRRTLKNRGYAQSCRYKRVQQKHHLENEKTQLIQQVEQLKQEVSR 73

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	358
1dh3_A	55	Transcription factor CREB; protein-DNA complex, tr	98.82
2dgc_A	63	Protein (GCN4); basic domain, leucine zipper, DNA	98.39
1jnm_A	62	Proto-oncogene C-JUN; BZIP, protein-DNA complex, t	98.09
2wt7_A	63	Proto-oncogene protein C-FOS; transcription, trans	98.06
1t2k_D	61	Cyclic-AMP-dependent transcription factor ATF-2; p	97.99
1gd2_E	70	Transcription factor PAP1; basic leucine zipper, p	97.6
2y39_A	118	Nickel and cobalt resistance protein CNRR; metal b	97.38
1ci6_A	63	Transcription factor ATF-4; BZIP; 2.60A {Homo sapi	96.63
1gu4_A	78	CAAT/enhancer binding protein beta; transcription/	95.36
3itf_A	145	Periplasmic adaptor protein CPXP; CPXR, CPXA, cpxr	94.09
3a5t_A	107	Transcription factor MAFG; protein-DNA complex, BZ	93.62
1hjb_A	87	Ccaat/enhancer binding protein beta; transcription	90.99
3oeo_A	138	Spheroplast protein Y; LTXXQ, extracytoplasmic str	87.14
3o39_A	108	Periplasmic protein related to spheroblast format;	83.24
3lay_A	175	Zinc resistance-associated protein; salmonella typ	83.19

>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1

Probab=98.82  E-value=4.4e-09  Score=78.16  Aligned_cols=42  Identities=43%  Similarity=0.553  Sum_probs=36.6

Q ss_pred             HHHHHHhhHHHHHHhhhhHHHHHHHHHhhHhHHhhHHHHHHHHhh
Q 018284           74 TLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQ  118 (358)
Q Consensus        74 ~~rrlaqnreaarksrlrkkayvqqle~sr~kl~qleqel~~ar~  118 (358)
                      -.+|+..|||+|+.||.|||+||..||..   +.+|+.|-..-+.
T Consensus         2 r~rR~~~NResA~rSR~RKk~~~~~LE~~---v~~L~~eN~~L~~   43 (55)
T 1dh3_A            2 REVRLMKNREAARESRRKKKEYVKSLENR---VAVLENQNKTLIE   43 (55)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHH
T ss_pred             hHHHHHhhHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHH
Confidence            47999999999999999999999999998   6788887665553

>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D

Probab=98.39  E-value=3.8e-07  Score=69.40  Aligned_cols=36  Identities=39%  Similarity=0.424  Sum_probs=28.0

Q ss_pred             CHHHHHHHHhhHHHHHHhhhhHHHHHHHHHhhHhHH
Q 018284           71 DQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKL  106 (358)
Q Consensus        71 ~~k~~rrlaqnreaarksrlrkkayvqqle~sr~kl  106 (358)
                      +|+..+|-++||||||+||.||++|+..||..-..|
T Consensus         7 ~d~~~~KR~rNreAArrsR~RK~~~~~~Le~~v~~L   42 (63)
T 2dgc_A            7 SDPAALKRARNTEAARRSRARKLQRMKQLEDKVEEL   42 (63)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            566677778899999999999999999999875443

>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A

Probab=98.09  E-value=4.6e-06  Score=62.83  Aligned_cols=36  Identities=39%  Similarity=0.386  Sum_probs=30.7

Q ss_pred             HHHHHHHhhHHHHHHhhhhHHHHHHHHHhhHhHHhh
Q 018284           73 KTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQ  108 (358)
Q Consensus        73 k~~rrlaqnreaarksrlrkkayvqqle~sr~kl~q  108 (358)
                      |..||...||+||+|||.|||.|++.||..--.|..
T Consensus         1 K~errr~rNr~AA~k~R~rKk~~~~~Le~~v~~L~~   36 (62)
T 1jnm_A            1 KAERKRMRNRIAASKSRKRKLERIARLEEKVKTLKA   36 (62)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            457899999999999999999999999988554443

>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D

Probab=98.06  E-value=7.7e-06  Score=61.90  Aligned_cols=41  Identities=27%  Similarity=0.317  Sum_probs=33.2

Q ss_pred             HHHHHHHhhHHHHHHhhhhHHHHHHHHHhhHhHHhhHHHHH
Q 018284           73 KTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL  113 (358)
Q Consensus        73 k~~rrlaqnreaarksrlrkkayvqqle~sr~kl~qleqel  113 (358)
                      |-.+|+-.||+||+|||.|||.|++.||.-.-.|..-..+|
T Consensus         2 kr~rrrerNR~AA~rcR~rKk~~~~~Le~~v~~L~~~n~~L   42 (63)
T 2wt7_A            2 KRRIRRERNKMAAAKCRNRRRELTDTLQAETDQLEDEKSAL   42 (63)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45789999999999999999999999999865554433333

>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1

Probab=97.99  E-value=9.3e-06  Score=60.90  Aligned_cols=35  Identities=37%  Similarity=0.509  Sum_probs=30.0

Q ss_pred             HHHHHHhhHHHHHHhhhhHHHHHHHHHhhHhHHhh
Q 018284           74 TLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQ  108 (358)
Q Consensus        74 ~~rrlaqnreaarksrlrkkayvqqle~sr~kl~q  108 (358)
                      =.+|+..||+||.|||.|||.|++.||..--.|..
T Consensus         2 R~~r~erNr~AA~k~R~rKk~~~~~Le~~~~~L~~   36 (61)
T 1t2k_D            2 RRKFLERNRAAASRSRQKRKVWVQSLEKKAEDLSS   36 (61)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            36899999999999999999999999988554443

>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1

Probab=97.60  E-value=6.1e-05  Score=58.53  Aligned_cols=37  Identities=35%  Similarity=0.430  Sum_probs=31.4

Q ss_pred             HHHHHHhhHHHHHHhhhhHHHHHHHHHhhHhHHhhHHHHH
Q 018284           74 TLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL  113 (358)
Q Consensus        74 ~~rrlaqnreaarksrlrkkayvqqle~sr~kl~qleqel  113 (358)
                      ..+|-||||+|+|-.|-||++||..||.-   +.+||.+.
T Consensus         9 ~~kR~~qNR~AQRafReRK~~~i~~LE~~---v~~le~~~   45 (70)
T 1gd2_E            9 SSKRKAQNRAAQRAFRKRKEDHLKALETQ---VVTLKELH   45 (70)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHH
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHH
Confidence            46889999999999999999999999987   55555543

>2y39_A Nickel and cobalt resistance protein CNRR; metal binding protein; 1.41A {Cupriavidus metallidurans} PDB: 2y3b_A 2y3d_A 2y3g_A* 2y3h_A 3epv_A*

Probab=97.38  E-value=0.0039  Score=52.88  Aligned_cols=101  Identities=17%  Similarity=0.195  Sum_probs=77.4

Q ss_pred             hHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhCCCCCCCCCCCchhchhhHHHHHHHhHH
Q 018284          223 SELLKLLVNQLEPLTEQQLVGIYNLQQSSQQAEDALSQGMDALQQSLAETLANGSPSPSGTSGNVANYMGQMAMAMGKLG  302 (358)
Q Consensus       223 S~llkLL~~~LepLTeqQl~~I~~Lqqst~qaEdaLsq~m~~LQqslad~la~~~~~~~g~~~~v~~~~~qm~~Am~kl~  302 (358)
                      +.+=.+|...| +||++|...|..+...-.....+|.++|...-.-|++.+....           .|..++..|+.   
T Consensus         9 ~~lH~~vh~~L-~Lt~~Q~~~leaie~~fa~~r~~le~emRaan~~La~ai~~~~-----------~~~p~V~aaid---   73 (118)
T 2y39_A            9 GDLHEILHEAV-PLDANEREILELKEDAFAQRRREIETRLRAANGKLADAIAKNP-----------AWSPEVEAATQ---   73 (118)
T ss_dssp             CCHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----------SCCHHHHHHHH---
T ss_pred             CchHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----------ccCHHHHHHHH---
Confidence            34445667777 7999999999999999999999999999999999999986321           13445555554   


Q ss_pred             HHHHHHHHHhHHHHHH---HHHHHHhcCHHHHHHHHHHHHHH
Q 018284          303 TLEGFLRQADNLRQQT---LQQMHRILTTRQSARALLAINDY  341 (358)
Q Consensus       303 ~Le~fl~qAD~LR~qT---L~~~~~ILTp~QAA~fLlA~~ey  341 (358)
                         .|-...-.|+..|   +-.|..||||-|+.+|=-.+.+-
T Consensus        74 ---~~h~~mG~LQkeTi~HvfeMR~VLtPeQ~~~fd~~vv~a  112 (118)
T 2y39_A           74 ---EVERAAGDLQRATLVHVFEMRAGLKPEHRPAYDRVLIDA  112 (118)
T ss_dssp             ---HHHHHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHHHH
T ss_pred             ---HHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence               3333555688888   56689999999999997666543

>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1

Probab=96.63  E-value=0.0019  Score=48.79  Aligned_cols=40  Identities=28%  Similarity=0.414  Sum_probs=28.3

Q ss_pred             HHHHHHhhHHHHHHhhhhHHHHHHHHHhhHhHHhhHHHHH
Q 018284           74 TLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL  113 (358)
Q Consensus        74 ~~rrlaqnreaarksrlrkkayvqqle~sr~kl~qleqel  113 (358)
                      -.|+.-+||.||+++|.|||.+++.||..--.|.+-..+|
T Consensus         3 ~~rKr~rNr~AA~R~R~KKk~~~~~le~~~~~L~~~N~~L   42 (63)
T 1ci6_A            3 KLKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEAL   42 (63)
T ss_dssp             -----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4577889999999999999999999998755554444443

>1gu4_A CAAT/enhancer binding protein beta; transcription/DNA, protein-DNA complex, transcription factor, BZIP, C/EBP; 1.80A {Homo sapiens} SCOP: h.1.3.1 PDB: 1gtw_A 1gu5_A 1h88_A 1h8a_A 1io4_A 2e43_A* 2e42_A* 1h89_A 1ci6_B 1nwq_A

Probab=95.36  E-value=0.05  Score=42.87  Aligned_cols=47  Identities=32%  Similarity=0.308  Sum_probs=37.1

Q ss_pred             CHHHHHHHHhhHHHHHHhhhhHHHHHHHHHh---------hH--hHHhhHHHHHHHHh
Q 018284           71 DQKTLRRLAQNREAARKSRLRKKAYVQQLES---------SR--LKLTQLEQELQRAR  117 (358)
Q Consensus        71 ~~k~~rrlaqnreaarksrlrkkayvqqle~---------sr--~kl~qleqel~~ar  117 (358)
                      |++-..|--.|.+||+|||-.+|.-.+.++.         ..  .++.+|+.|+..-|
T Consensus        13 d~~Y~~rR~rNN~AakrSR~krk~r~~e~~~r~~~L~~eN~~L~~~v~~L~~E~~~Lr   70 (78)
T 1gu4_A           13 SDEYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKVEQLSRELSTLR   70 (78)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            6777888899999999999999998888843         33  45667777777666

>3itf_A Periplasmic adaptor protein CPXP; CPXR, CPXA, cpxrap, CPX-pathway, envelope stress, transduction; HET: MSE; 1.45A {Escherichia coli str} PDB: 3qzc_A

Probab=94.09  E-value=0.3  Score=42.43  Aligned_cols=98  Identities=16%  Similarity=0.181  Sum_probs=60.7

Q ss_pred             hcCCChHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhhhhCCCCCCCCCCCchhchhhHHHHHH-HhHHHHHHHHH
Q 018284          232 QLEPLTEQQLVGIYNLQQSSQQAEDALSQ-GMDALQQSLAETLANGSPSPSGTSGNVANYMGQMAMAM-GKLGTLEGFLR  309 (358)
Q Consensus       232 ~LepLTeqQl~~I~~Lqqst~qaEdaLsq-~m~~LQqslad~la~~~~~~~g~~~~v~~~~~qm~~Am-~kl~~Le~fl~  309 (358)
                      .| +||++|...|..|.+..+.+...+.. .++    .+-+.+.++..       +        +.|+ ..++.+...-.
T Consensus        43 ~L-~LTdeQkqqir~L~~~~r~~~~~~~~~~r~----~l~~Li~ad~f-------D--------eaa~ral~~~~~~~~~  102 (145)
T 3itf_A           43 GI-SLTEHQRQQMRDLMQQARHEQPPVNVSELE----TMHRLVTAENF-------D--------ENAVRAQAEKMANEQI  102 (145)
T ss_dssp             TC-CCCHHHHHHHHHHHHHHHHHSCCCCHHHHH----HHHHHHTCSSC-------C--------HHHHHHHHHHHHHHHH
T ss_pred             cC-CCCHHHHHHHHHHHHHHHHHhhhccHHHHH----HHHHHHccCCC-------C--------HHHHHHHHHHHHHHHH
Confidence            44 69999999999999887776554431 222    23333332211       1        1122 22233334444


Q ss_pred             HHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhc
Q 018284          310 QADNLRQQTLQQMHRILTTRQSARALLAINDYFSRLRALS  349 (358)
Q Consensus       310 qAD~LR~qTL~~~~~ILTp~QAA~fLlA~~ey~~rLRaLs  349 (358)
                      +.--.|.++-.+|..||||-|-+.|---..+-...++.++
T Consensus       103 e~~v~r~k~~~qiy~vLTPEQk~ql~e~~~~r~~~~~~~~  142 (145)
T 3itf_A          103 ARQVEMAKVRNQMYRLLTPEQQAVLNEKHQQRMEQLRDVT  142 (145)
T ss_dssp             HHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTTCGG
T ss_pred             HHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHhh
Confidence            4445788888999999999999998876666555555544

>3a5t_A Transcription factor MAFG; protein-DNA complex, BZIP factor, acetylation, DNA-binding, isopeptide bond, nucleus; 2.80A {Mus musculus}

Probab=93.62  E-value=0.058  Score=44.96  Aligned_cols=31  Identities=29%  Similarity=0.413  Sum_probs=28.6

Q ss_pred             HHHHHHHhhHHHHHHhhhhHHHHHHHHHhhH
Q 018284           73 KTLRRLAQNREAARKSRLRKKAYVQQLESSR  103 (358)
Q Consensus        73 k~~rrlaqnreaarksrlrkkayvqqle~sr  103 (358)
                      |-.||--.||++|+.||.||.+.+..||.-.
T Consensus        37 K~~RR~lKNR~yAq~CR~rk~~~~~~LE~e~   67 (107)
T 3a5t_A           37 KQRRRTLKNRGYAASCRVKRVTQKEELEKQK   67 (107)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            7789999999999999999999999999763

>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1

Probab=90.99  E-value=0.67  Score=37.15  Aligned_cols=47  Identities=30%  Similarity=0.285  Sum_probs=34.6

Q ss_pred             CHHHHHHHHhhHHHHHHhhhhHHHHHHHHHhh-----------HhHHhhHHHHHHHHh
Q 018284           71 DQKTLRRLAQNREAARKSRLRKKAYVQQLESS-----------RLKLTQLEQELQRAR  117 (358)
Q Consensus        71 ~~k~~rrlaqnreaarksrlrkkayvqqle~s-----------r~kl~qleqel~~ar  117 (358)
                      |++-..|--.|.+||||||-.+|.=.+.++..           +.++.+|+.|++.-|
T Consensus        13 d~~Y~~rR~rNN~AarrSR~krk~r~~e~~~r~~~Le~EN~~Lr~~v~~L~~E~~~Lr   70 (87)
T 1hjb_A           13 SDEYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKVEQLSRELSTLR   70 (87)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            77788888999999999999998877776433           234555666666555

>3oeo_A Spheroplast protein Y; LTXXQ, extracytoplasmic stress response-related, signaling P; 2.70A {Escherichia coli}

Probab=87.14  E-value=0.36  Score=41.25  Aligned_cols=99  Identities=11%  Similarity=0.124  Sum_probs=54.6

Q ss_pred             HHhhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhCCCCCCCCCCCchhchhhHHHHHHHhHHHHHHHH
Q 018284          229 LVNQLEPLTEQQLVGIYNLQQSSQQAEDALSQGMDALQQSLAETLANGSPSPSGTSGNVANYMGQMAMAMGKLGTLEGFL  308 (358)
Q Consensus       229 L~~~LepLTeqQl~~I~~Lqqst~qaEdaLsq~m~~LQqslad~la~~~~~~~g~~~~v~~~~~qm~~Am~kl~~Le~fl  308 (358)
                      +...| +||++|...|..|.+..+..-..   .+....+.+.+.+.++..       +    ...+.   ..++.+...-
T Consensus        28 m~~~L-~LT~eQ~~qir~i~~~~r~~~~~---~~~~~r~~l~~Li~a~~f-------D----eaav~---al~~~~~~~~   89 (138)
T 3oeo_A           28 MFKDL-NLTDAQKQQIREIMKGQRDQMKR---PPLEERRAMHDIITSDTF-------D----KVKAE---AQIAKMEEQR   89 (138)
T ss_dssp             --CCS-CCCTTHHHHHHHHHHHHSSSSCC---CCTTHHHHHHHHHTCSSC-------C----HHHHH---HHHGGGSHHH
T ss_pred             HHhcC-CCCHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHhccCCC-------C----HHHHH---HHHHHHHHHH
Confidence            35666 69999999999998776554221   112222344444432211       1    11111   2223333344


Q ss_pred             HHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Q 018284          309 RQADNLRQQTLQQMHRILTTRQSARALLAINDYFSRL  345 (358)
Q Consensus       309 ~qAD~LR~qTL~~~~~ILTp~QAA~fLlA~~ey~~rL  345 (358)
                      .+.--.|.++..+|..||||-|-+.|---+.+-..++
T Consensus        90 ~e~~~~~~~~~~~~~~vLTPEQr~q~~~~~~kr~~~~  126 (138)
T 3oeo_A           90 KANMLAHMETQNKIYNILTPEQKKQFNANFEKRLTER  126 (138)
T ss_dssp             HHHHHHHHHHHHHHHTTSCHHHHHHHHHHTC------
T ss_pred             HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHh
Confidence            4445578889999999999999999876655544443

>3o39_A Periplasmic protein related to spheroblast format; alpha-helical, structural genomics, montreal-kingston bacter structural genomics initiative; HET: MSE; 2.60A {Escherichia coli}

Probab=83.24  E-value=1.6  Score=36.01  Aligned_cols=83  Identities=16%  Similarity=0.123  Sum_probs=45.4

Q ss_pred             CChHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhhhCCCCCCCCCCCchhchhhHHHHHHHhHHHHHHHHHHHhH
Q 018284          235 PLTEQQLVGIYNLQQSSQQAEDALS-QGMDALQQSLAETLANGSPSPSGTSGNVANYMGQMAMAMGKLGTLEGFLRQADN  313 (358)
Q Consensus       235 pLTeqQl~~I~~Lqqst~qaEdaLs-q~m~~LQqslad~la~~~~~~~g~~~~v~~~~~qm~~Am~kl~~Le~fl~qAD~  313 (358)
                      +||++|...|..|....+.+-.... ...+    .+-+.+.++....       + ......   +++   ...-.+.--
T Consensus        17 ~LTd~Qk~qir~L~~~~r~~~~~~~~~~r~----~m~~Li~ad~FDE-------a-aar~l~---~~~---~~~~~e~~v   78 (108)
T 3o39_A           17 NLTDAQKQQIREIMKGQRDQMKRPPLEERR----AMHDIIASDTFDK-------A-KAEAQI---AKM---EEQRKANML   78 (108)
T ss_dssp             CCCHHHHHHHHHHHHTTTTSCCCCCHHHHH----HHHHHHSSSSCCH-------H-HHHHHH---HHT---HHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHhcccccHHHHH----HHHHHhccCCCCH-------H-HHHHHH---HHH---HHHHHHHHH
Confidence            6999999999998887665532222 1122    2334443221110       0 111111   211   111222223


Q ss_pred             HHHHHHHHHHHhcCHHHHHHHH
Q 018284          314 LRQQTLQQMHRILTTRQSARAL  335 (358)
Q Consensus       314 LR~qTL~~~~~ILTp~QAA~fL  335 (358)
                      .|.++=++|..||||-|-+.|-
T Consensus        79 ~~~r~~~qmy~lLTPEQk~q~~  100 (108)
T 3o39_A           79 AHMETQNKIYNILTPEQKKQFN  100 (108)
T ss_dssp             HHHHHHHHHHTTSCHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCHHHHHHHH
Confidence            5677788999999999998864

>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}

Probab=83.19  E-value=14  Score=32.74  Aligned_cols=42  Identities=19%  Similarity=0.177  Sum_probs=36.4

Q ss_pred             CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhC
Q 018284          234 EPLTEQQLVGIYNLQQSSQQAEDALSQGMDALQQSLAETLAN  275 (358)
Q Consensus       234 epLTeqQl~~I~~Lqqst~qaEdaLsq~m~~LQqslad~la~  275 (358)
                      -+||++|..+|..|+++-+..-.+|.+.|...++.+-+.+..
T Consensus        66 LnLT~EQq~ql~~I~~e~r~~~~~Lr~ql~akr~EL~aL~~a  107 (175)
T 3lay_A           66 SPLTTEQQATAQKIYDDYYTQTSALRQQLISKRYEYNALLTA  107 (175)
T ss_dssp             --CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            379999999999999999999999999999999888877653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00